Query 003384
Match_columns 824
No_of_seqs 592 out of 3472
Neff 7.2
Searched_HMMs 46136
Date Thu Mar 28 22:26:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003384.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/003384hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1187 Serine/threonine prote 100.0 6E-49 1.3E-53 436.6 24.6 275 450-735 61-353 (361)
2 KOG0192 Tyrosine kinase specif 100.0 4.4E-45 9.4E-50 403.7 26.1 255 466-738 43-307 (362)
3 KOG0605 NDR and related serine 100.0 3.2E-42 7E-47 378.6 29.0 249 464-722 141-435 (550)
4 KOG0595 Serine/threonine-prote 100.0 3.3E-43 7.1E-48 375.8 18.6 244 463-725 9-264 (429)
5 KOG0581 Mitogen-activated prot 100.0 8.2E-43 1.8E-47 370.1 17.5 238 466-724 81-330 (364)
6 KOG0575 Polo-like serine/threo 100.0 2E-42 4.4E-47 385.7 21.5 243 464-727 18-267 (592)
7 KOG0197 Tyrosine kinases [Sign 100.0 2.1E-42 4.5E-47 382.3 19.9 251 465-736 207-463 (468)
8 KOG0591 NIMA (never in mitosis 100.0 2.6E-43 5.7E-48 359.3 10.7 252 465-732 20-284 (375)
9 KOG0598 Ribosomal protein S6 k 100.0 2.9E-42 6.2E-47 365.9 16.5 237 463-721 24-269 (357)
10 KOG0615 Serine/threonine prote 100.0 1.3E-42 2.9E-47 370.3 13.6 241 465-725 173-433 (475)
11 KOG0592 3-phosphoinositide-dep 100.0 2.8E-40 6.1E-45 362.8 18.5 250 464-727 73-335 (604)
12 KOG0198 MEKK and related serin 100.0 8E-40 1.7E-44 352.3 18.4 247 464-725 17-272 (313)
13 cd05102 PTKc_VEGFR3 Catalytic 100.0 2.7E-39 5.8E-44 357.0 21.3 255 463-735 6-335 (338)
14 PHA02988 hypothetical protein; 100.0 8.1E-39 1.8E-43 345.2 24.5 243 469-735 25-280 (283)
15 KOG0600 Cdc2-related protein k 100.0 1.6E-39 3.5E-44 354.3 18.9 248 465-727 118-398 (560)
16 KOG0616 cAMP-dependent protein 100.0 8.1E-40 1.8E-44 336.4 14.5 231 465-721 45-284 (355)
17 KOG0593 Predicted protein kina 100.0 1.4E-39 3.1E-44 335.0 15.0 246 465-725 3-280 (396)
18 KOG0193 Serine/threonine prote 100.0 2.2E-39 4.7E-44 359.5 15.7 256 464-734 392-653 (678)
19 KOG0659 Cdk activating kinase 100.0 1.2E-38 2.6E-43 323.6 19.7 246 465-726 3-278 (318)
20 KOG0597 Serine-threonine prote 100.0 2.9E-39 6.2E-44 354.1 15.0 240 465-726 3-248 (808)
21 KOG0578 p21-activated serine/t 100.0 7.8E-39 1.7E-43 354.5 18.6 241 465-724 274-518 (550)
22 KOG0583 Serine/threonine prote 100.0 3.8E-38 8.2E-43 351.0 22.7 244 462-728 15-273 (370)
23 KOG1026 Nerve growth factor re 100.0 6.4E-39 1.4E-43 370.0 15.8 255 464-736 486-764 (774)
24 KOG0582 Ste20-like serine/thre 100.0 5.4E-38 1.2E-42 337.9 20.5 257 462-726 24-290 (516)
25 KOG4721 Serine/threonine prote 100.0 3.9E-39 8.6E-44 352.4 11.7 236 469-732 129-366 (904)
26 KOG0694 Serine/threonine prote 100.0 3.4E-38 7.3E-43 355.4 19.6 240 462-723 366-613 (694)
27 cd05096 PTKc_DDR1 Catalytic do 100.0 1E-37 2.2E-42 339.1 22.7 259 464-732 5-303 (304)
28 cd05631 STKc_GRK4 Catalytic do 100.0 1E-37 2.2E-42 336.3 20.8 241 465-723 1-250 (285)
29 cd05612 STKc_PRKX_like Catalyt 100.0 7.3E-38 1.6E-42 338.7 19.1 232 465-722 2-242 (291)
30 KOG0585 Ca2+/calmodulin-depend 100.0 2E-37 4.4E-42 335.2 20.1 249 462-724 95-367 (576)
31 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 1.9E-37 4.1E-42 341.9 20.0 245 464-725 1-253 (333)
32 PTZ00263 protein kinase A cata 100.0 9.2E-38 2E-42 344.3 17.4 234 464-723 18-260 (329)
33 KOG0661 MAPK related serine/th 100.0 3.5E-38 7.6E-43 341.7 13.0 244 464-725 10-287 (538)
34 cd05104 PTKc_Kit Catalytic dom 100.0 3.9E-37 8.5E-42 345.7 21.8 253 463-733 34-373 (375)
35 cd05064 PTKc_EphR_A10 Catalyti 100.0 5.2E-37 1.1E-41 327.1 21.4 249 464-733 5-264 (266)
36 cd05108 PTKc_EGFR Catalytic do 100.0 7.7E-37 1.7E-41 334.4 22.9 255 464-736 7-270 (316)
37 cd05571 STKc_PKB Catalytic dom 100.0 1.6E-37 3.6E-42 341.2 17.5 232 470-722 1-239 (323)
38 cd05106 PTKc_CSF-1R Catalytic 100.0 3.2E-37 6.9E-42 346.3 20.1 257 463-734 37-372 (374)
39 cd05585 STKc_YPK1_like Catalyt 100.0 2.6E-37 5.6E-42 337.9 18.7 231 472-723 1-238 (312)
40 KOG0663 Protein kinase PITSLRE 100.0 2.6E-37 5.5E-42 322.1 17.5 245 465-725 77-357 (419)
41 KOG1095 Protein tyrosine kinas 100.0 1.9E-37 4.2E-42 369.3 18.7 257 465-740 693-967 (1025)
42 PF07714 Pkinase_Tyr: Protein 100.0 2.5E-37 5.4E-42 328.9 17.0 244 469-731 4-259 (259)
43 cd07848 STKc_CDKL5 Catalytic d 100.0 9.9E-37 2.2E-41 327.8 21.9 247 465-724 2-279 (287)
44 KOG0588 Serine/threonine prote 100.0 2.5E-37 5.3E-42 345.6 17.6 238 465-727 13-260 (786)
45 PTZ00426 cAMP-dependent protei 100.0 4.2E-37 9.2E-42 340.9 18.6 234 464-721 30-271 (340)
46 PTZ00267 NIMA-related protein 100.0 7.9E-37 1.7E-41 353.9 21.5 248 465-727 68-321 (478)
47 cd05048 PTKc_Ror Catalytic Dom 100.0 9.8E-37 2.1E-41 326.9 20.6 250 465-732 6-281 (283)
48 cd05116 PTKc_Syk Catalytic dom 100.0 1.8E-36 3.8E-41 320.9 22.2 242 471-732 2-253 (257)
49 cd07859 STKc_TDY_MAPK_plant Ca 100.0 1.4E-36 3.1E-41 334.3 22.2 249 465-725 1-286 (338)
50 cd05595 STKc_PKB_beta Catalyti 100.0 5.3E-37 1.2E-41 337.3 18.7 231 470-721 1-238 (323)
51 cd05114 PTKc_Tec_Rlk Catalytic 100.0 1.9E-36 4.1E-41 320.2 22.1 247 465-731 5-255 (256)
52 cd07862 STKc_CDK6 Catalytic do 100.0 2.6E-36 5.6E-41 325.1 23.4 247 465-725 2-283 (290)
53 cd05072 PTKc_Lyn Catalytic dom 100.0 1.6E-36 3.4E-41 321.5 21.3 249 464-733 6-260 (261)
54 KOG0201 Serine/threonine prote 100.0 6.8E-38 1.5E-42 337.2 10.7 240 465-725 14-259 (467)
55 cd05094 PTKc_TrkC Catalytic do 100.0 1.7E-36 3.7E-41 327.4 21.6 254 465-736 6-284 (291)
56 cd06649 PKc_MEK2 Catalytic dom 100.0 1.9E-36 4.2E-41 333.9 22.4 246 464-724 5-296 (331)
57 cd05062 PTKc_IGF-1R Catalytic 100.0 1.3E-36 2.8E-41 325.5 20.3 253 462-732 4-276 (277)
58 cd05593 STKc_PKB_gamma Catalyt 100.0 9.7E-37 2.1E-41 336.1 19.8 231 470-721 1-238 (328)
59 cd05111 PTK_HER3 Pseudokinase 100.0 4.5E-36 9.8E-41 322.3 24.4 252 465-736 8-270 (279)
60 cd05093 PTKc_TrkB Catalytic do 100.0 2E-36 4.4E-41 326.3 21.7 256 464-737 5-282 (288)
61 cd05599 STKc_NDR_like Catalyti 100.0 8.3E-37 1.8E-41 340.8 19.2 249 464-722 1-286 (364)
62 KOG0194 Protein tyrosine kinas 100.0 4.4E-37 9.5E-42 345.0 16.9 254 465-737 158-423 (474)
63 cd05573 STKc_ROCK_NDR_like Cat 100.0 9.9E-37 2.1E-41 337.7 19.3 252 465-727 2-282 (350)
64 cd05052 PTKc_Abl Catalytic dom 100.0 3E-36 6.6E-41 320.2 22.2 251 465-734 7-262 (263)
65 cd05068 PTKc_Frk_like Catalyti 100.0 3.5E-36 7.7E-41 319.0 22.5 252 463-733 5-260 (261)
66 cd05592 STKc_nPKC_theta_delta 100.0 1.6E-36 3.4E-41 332.6 20.5 236 471-727 2-245 (316)
67 cd05049 PTKc_Trk Catalytic dom 100.0 2.4E-36 5.2E-41 323.1 21.4 251 464-732 5-279 (280)
68 KOG0611 Predicted serine/threo 100.0 5.5E-37 1.2E-41 324.6 16.0 237 462-723 51-297 (668)
69 cd05105 PTKc_PDGFR_alpha Catal 100.0 2.6E-36 5.6E-41 341.7 22.5 255 462-734 35-397 (400)
70 cd07869 STKc_PFTAIRE1 Catalyti 100.0 5.1E-36 1.1E-40 325.8 23.8 248 463-724 4-283 (303)
71 cd05584 STKc_p70S6K Catalytic 100.0 1.7E-36 3.7E-41 333.2 19.9 232 470-722 2-244 (323)
72 cd07871 STKc_PCTAIRE3 Catalyti 100.0 4.4E-36 9.4E-41 324.1 22.7 248 464-725 5-281 (288)
73 cd05148 PTKc_Srm_Brk Catalytic 100.0 1.5E-36 3.2E-41 321.3 18.7 252 463-733 5-260 (261)
74 cd05115 PTKc_Zap-70 Catalytic 100.0 5.7E-36 1.2E-40 317.7 23.0 244 471-733 2-254 (257)
75 cd05587 STKc_cPKC Catalytic do 100.0 1.2E-36 2.6E-41 334.3 18.5 239 465-724 1-247 (324)
76 cd05626 STKc_LATS2 Catalytic d 100.0 2.6E-36 5.6E-41 339.6 21.4 252 465-725 2-301 (381)
77 cd05589 STKc_PKN Catalytic dom 100.0 1.6E-36 3.4E-41 333.5 19.2 236 466-723 1-246 (324)
78 cd05033 PTKc_EphR Catalytic do 100.0 4.9E-36 1.1E-40 318.8 21.9 253 464-734 4-265 (266)
79 cd05075 PTKc_Axl Catalytic dom 100.0 4.6E-36 1E-40 319.5 21.7 249 467-733 2-270 (272)
80 cd05616 STKc_cPKC_beta Catalyt 100.0 2.1E-36 4.5E-41 332.4 19.5 238 465-723 1-246 (323)
81 cd05090 PTKc_Ror1 Catalytic do 100.0 4.1E-36 8.8E-41 322.7 21.3 250 465-732 6-281 (283)
82 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 5E-36 1.1E-40 321.9 21.9 260 464-734 4-283 (284)
83 PTZ00283 serine/threonine prot 100.0 3.3E-36 7.2E-41 349.7 22.1 255 457-726 25-294 (496)
84 KOG0580 Serine/threonine prote 100.0 2.8E-37 6.1E-42 309.7 11.0 242 463-725 21-269 (281)
85 cd05619 STKc_nPKC_theta Cataly 100.0 3.7E-36 8E-41 329.7 20.8 237 470-727 1-245 (316)
86 cd05035 PTKc_Axl_like Catalyti 100.0 5.9E-36 1.3E-40 318.2 21.8 253 466-734 1-272 (273)
87 cd05113 PTKc_Btk_Bmx Catalytic 100.0 5.7E-36 1.2E-40 317.3 21.5 247 465-731 5-255 (256)
88 cd05608 STKc_GRK1 Catalytic do 100.0 2.2E-36 4.8E-41 325.1 18.5 236 472-723 1-246 (280)
89 cd05629 STKc_NDR_like_fungal C 100.0 2.5E-36 5.5E-41 338.9 19.7 250 465-724 2-300 (377)
90 cd05059 PTKc_Tec_like Catalyti 100.0 7.9E-36 1.7E-40 315.7 22.2 247 465-731 5-255 (256)
91 cd05054 PTKc_VEGFR Catalytic d 100.0 3.5E-36 7.6E-41 333.1 20.3 254 464-735 7-334 (337)
92 cd05045 PTKc_RET Catalytic dom 100.0 8.4E-36 1.8E-40 321.6 22.7 255 465-735 1-287 (290)
93 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 1.1E-35 2.4E-40 315.1 23.2 249 465-732 7-258 (260)
94 cd05620 STKc_nPKC_delta Cataly 100.0 2.7E-36 5.8E-41 330.7 18.9 237 470-727 1-245 (316)
95 cd05590 STKc_nPKC_eta Catalyti 100.0 2.4E-36 5.1E-41 331.8 18.3 232 471-723 2-241 (320)
96 cd05091 PTKc_Ror2 Catalytic do 100.0 3.9E-36 8.5E-41 322.5 19.6 252 465-732 6-281 (283)
97 cd05588 STKc_aPKC Catalytic do 100.0 2.2E-36 4.8E-41 333.3 18.1 240 470-723 1-250 (329)
98 cd05071 PTKc_Src Catalytic dom 100.0 9.3E-36 2E-40 316.7 22.2 251 464-733 6-259 (262)
99 cd08228 STKc_Nek6 Catalytic do 100.0 1.1E-35 2.5E-40 315.6 22.8 256 464-734 2-265 (267)
100 cd06646 STKc_MAP4K5 Catalytic 100.0 6.9E-36 1.5E-40 317.6 21.2 246 464-725 9-261 (267)
101 cd05060 PTKc_Syk_like Catalyti 100.0 1.2E-35 2.6E-40 314.3 22.8 245 470-734 1-255 (257)
102 cd05082 PTKc_Csk Catalytic dom 100.0 9.4E-36 2E-40 314.8 22.0 243 465-733 7-255 (256)
103 cd05625 STKc_LATS1 Catalytic d 100.0 3.1E-36 6.6E-41 338.8 19.3 248 465-722 2-295 (382)
104 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 2E-35 4.4E-40 313.1 24.4 256 464-735 2-266 (267)
105 cd05605 STKc_GRK4_like Catalyt 100.0 6.1E-36 1.3E-40 322.5 20.7 243 465-723 1-250 (285)
106 cd05614 STKc_MSK2_N N-terminal 100.0 2.3E-36 4.9E-41 333.0 17.6 241 465-723 1-256 (332)
107 KOG0594 Protein kinase PCTAIRE 100.0 6.9E-36 1.5E-40 317.2 20.6 247 465-725 12-298 (323)
108 cd05594 STKc_PKB_alpha Catalyt 100.0 1.8E-36 3.9E-41 333.1 16.8 232 470-721 1-239 (325)
109 cd05053 PTKc_FGFR Catalytic do 100.0 6E-36 1.3E-40 322.7 20.4 257 462-734 10-291 (293)
110 cd05591 STKc_nPKC_epsilon Cata 100.0 4E-36 8.8E-41 329.8 19.4 231 471-722 2-240 (321)
111 KOG0658 Glycogen synthase kina 100.0 1.2E-36 2.5E-41 322.6 14.4 250 463-729 23-306 (364)
112 cd05092 PTKc_TrkA Catalytic do 100.0 6.2E-36 1.3E-40 321.2 20.2 252 465-732 6-279 (280)
113 cd05628 STKc_NDR1 Catalytic do 100.0 8.5E-36 1.9E-40 333.1 22.2 251 465-724 2-288 (363)
114 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 8.5E-36 1.8E-40 320.2 21.3 257 466-735 6-282 (283)
115 cd05575 STKc_SGK Catalytic dom 100.0 3E-36 6.5E-41 331.1 18.0 237 470-727 1-245 (323)
116 PLN00034 mitogen-activated pro 100.0 4.5E-36 9.7E-41 333.9 19.5 239 466-725 76-324 (353)
117 cd05618 STKc_aPKC_iota Catalyt 100.0 2.1E-36 4.6E-41 333.5 16.6 240 470-723 1-250 (329)
118 cd05582 STKc_RSK_N N-terminal 100.0 1.2E-36 2.6E-41 333.3 14.3 235 470-725 2-245 (318)
119 cd05084 PTKc_Fes Catalytic dom 100.0 1.1E-35 2.5E-40 313.2 21.2 244 471-732 2-251 (252)
120 KOG0589 Serine/threonine prote 100.0 2.5E-36 5.4E-41 333.1 16.7 247 464-728 4-257 (426)
121 cd05032 PTKc_InsR_like Catalyt 100.0 6.7E-36 1.5E-40 319.1 19.6 253 464-732 6-276 (277)
122 cd05598 STKc_LATS Catalytic do 100.0 4.4E-36 9.5E-41 336.7 18.9 247 465-721 2-290 (376)
123 cd05051 PTKc_DDR Catalytic dom 100.0 1.7E-35 3.7E-40 319.4 22.8 259 464-732 5-295 (296)
124 cd05603 STKc_SGK2 Catalytic do 100.0 7E-36 1.5E-40 327.8 20.0 239 471-730 2-248 (321)
125 cd05067 PTKc_Lck_Blk Catalytic 100.0 1.6E-35 3.5E-40 313.8 22.1 251 464-733 6-259 (260)
126 cd05040 PTKc_Ack_like Catalyti 100.0 1.7E-35 3.6E-40 312.6 22.1 246 471-731 2-255 (257)
127 cd05109 PTKc_HER2 Catalytic do 100.0 1.3E-35 2.7E-40 318.2 21.4 253 464-736 7-270 (279)
128 PTZ00036 glycogen synthase kin 100.0 7E-36 1.5E-40 342.4 20.8 249 462-727 64-349 (440)
129 cd08229 STKc_Nek7 Catalytic do 100.0 1.5E-35 3.3E-40 314.7 21.8 255 465-734 3-265 (267)
130 cd06650 PKc_MEK1 Catalytic dom 100.0 1.5E-35 3.2E-40 327.4 22.3 196 464-674 5-205 (333)
131 cd05043 PTK_Ryk Pseudokinase d 100.0 1.7E-35 3.8E-40 317.0 22.2 257 463-735 5-277 (280)
132 cd05098 PTKc_FGFR1 Catalytic d 100.0 1.3E-35 2.7E-40 323.3 21.3 257 464-738 18-303 (307)
133 cd05615 STKc_cPKC_alpha Cataly 100.0 7.4E-36 1.6E-40 328.3 19.6 239 465-724 1-247 (323)
134 cd08529 STKc_FA2-like Catalyti 100.0 1.5E-35 3.3E-40 312.0 21.2 243 465-725 1-249 (256)
135 cd05063 PTKc_EphR_A2 Catalytic 100.0 1.5E-35 3.2E-40 315.2 21.1 254 464-734 5-267 (268)
136 cd05607 STKc_GRK7 Catalytic do 100.0 1.5E-35 3.2E-40 318.2 21.2 238 472-726 1-247 (277)
137 cd07853 STKc_NLK Catalytic dom 100.0 3.9E-35 8.5E-40 328.7 25.5 247 465-725 1-284 (372)
138 cd05570 STKc_PKC Catalytic dom 100.0 9.4E-36 2E-40 326.6 20.1 233 470-723 1-241 (318)
139 cd05110 PTKc_HER4 Catalytic do 100.0 2E-35 4.3E-40 321.4 22.4 284 464-769 7-301 (303)
140 cd05039 PTKc_Csk_like Catalyti 100.0 3.2E-35 7E-40 310.5 23.4 246 464-732 6-254 (256)
141 cd05617 STKc_aPKC_zeta Catalyt 100.0 3.5E-36 7.5E-41 331.5 16.5 234 470-723 1-248 (327)
142 cd05036 PTKc_ALK_LTK Catalytic 100.0 1.5E-35 3.3E-40 317.4 21.0 253 463-731 5-275 (277)
143 cd05604 STKc_SGK3 Catalytic do 100.0 3.9E-36 8.4E-41 330.5 16.7 240 470-730 1-248 (325)
144 PRK13184 pknD serine/threonine 100.0 2.3E-35 5E-40 354.0 24.7 266 464-736 2-292 (932)
145 KOG0610 Putative serine/threon 100.0 6.7E-36 1.4E-40 319.7 17.8 250 465-723 78-382 (459)
146 cd05596 STKc_ROCK Catalytic do 100.0 8.3E-36 1.8E-40 334.3 19.4 245 463-724 42-299 (370)
147 cd05069 PTKc_Yes Catalytic dom 100.0 3.7E-35 8E-40 311.3 23.2 250 465-733 7-259 (260)
148 cd05066 PTKc_EphR_A Catalytic 100.0 1.9E-35 4.1E-40 314.8 20.9 251 464-733 4-265 (267)
149 cd05097 PTKc_DDR_like Catalyti 100.0 1.8E-35 4E-40 320.0 21.2 259 464-732 5-294 (295)
150 cd06637 STKc_TNIK Catalytic do 100.0 2.9E-35 6.3E-40 313.3 22.4 247 461-725 3-265 (272)
151 cd05107 PTKc_PDGFR_beta Cataly 100.0 2.2E-35 4.8E-40 334.1 22.6 259 461-734 34-399 (401)
152 cd05101 PTKc_FGFR2 Catalytic d 100.0 2E-35 4.3E-40 321.1 21.4 259 463-737 14-299 (304)
153 cd05601 STKc_CRIK Catalytic do 100.0 4.5E-36 9.7E-41 330.4 16.5 246 464-725 1-259 (330)
154 cd05089 PTKc_Tie1 Catalytic do 100.0 2.2E-35 4.8E-40 319.9 21.6 254 464-736 2-277 (297)
155 cd05061 PTKc_InsR Catalytic do 100.0 2E-35 4.2E-40 318.7 20.8 256 462-733 4-277 (288)
156 cd00192 PTKc Catalytic domain 100.0 4.7E-35 1E-39 308.0 23.2 246 470-731 1-261 (262)
157 cd05058 PTKc_Met_Ron Catalytic 100.0 3.1E-35 6.7E-40 311.4 21.9 248 471-734 2-259 (262)
158 cd06625 STKc_MEKK3_like Cataly 100.0 5.1E-35 1.1E-39 309.6 23.4 246 464-725 2-256 (263)
159 cd05088 PTKc_Tie2 Catalytic do 100.0 2E-35 4.4E-40 321.5 20.5 253 464-735 7-281 (303)
160 cd06628 STKc_MAPKKK_Byr2_like 100.0 7.1E-35 1.5E-39 309.5 24.2 245 466-724 2-259 (267)
161 cd06624 STKc_ASK Catalytic dom 100.0 4.4E-35 9.6E-40 311.8 22.7 250 459-725 3-261 (268)
162 cd05602 STKc_SGK1 Catalytic do 100.0 1E-35 2.2E-40 327.1 18.2 238 471-729 2-247 (325)
163 cd05056 PTKc_FAK Catalytic dom 100.0 3.8E-35 8.2E-40 312.7 22.0 254 464-736 6-267 (270)
164 cd05621 STKc_ROCK2 Catalytic d 100.0 1.8E-35 3.8E-40 331.7 20.4 242 463-724 42-299 (370)
165 KOG1989 ARK protein kinase fam 100.0 6.9E-36 1.5E-40 346.5 17.5 261 461-732 34-310 (738)
166 cd05627 STKc_NDR2 Catalytic do 100.0 9E-36 2E-40 332.4 17.6 249 465-723 2-284 (360)
167 KOG0199 ACK and related non-re 100.0 1.1E-35 2.5E-40 331.9 18.0 247 466-727 112-366 (1039)
168 cd06643 STKc_SLK Catalytic dom 100.0 4.3E-35 9.3E-40 314.6 21.9 242 466-724 7-257 (282)
169 KOG0660 Mitogen-activated prot 100.0 4.5E-36 9.8E-41 317.6 13.9 253 462-727 20-308 (359)
170 KOG1151 Tousled-like protein k 100.0 1.7E-34 3.6E-39 308.4 25.6 256 463-724 462-736 (775)
171 cd05103 PTKc_VEGFR2 Catalytic 100.0 3.9E-35 8.5E-40 325.2 21.8 254 464-735 7-340 (343)
172 cd06654 STKc_PAK1 Catalytic do 100.0 6.2E-35 1.4E-39 316.6 22.9 244 464-726 20-267 (296)
173 cd07876 STKc_JNK2 Catalytic do 100.0 4.8E-35 1E-39 326.3 22.6 245 463-725 20-311 (359)
174 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 8.3E-35 1.8E-39 310.2 23.5 247 471-731 2-267 (269)
175 cd05623 STKc_MRCK_alpha Cataly 100.0 7E-35 1.5E-39 321.6 23.6 245 465-723 2-260 (332)
176 cd05083 PTKc_Chk Catalytic dom 100.0 5.2E-35 1.1E-39 308.8 21.6 242 465-732 7-252 (254)
177 PHA03212 serine/threonine kina 100.0 1.5E-35 3.2E-40 334.7 18.6 189 464-672 92-284 (391)
178 cd05055 PTKc_PDGFR Catalytic d 100.0 6.4E-35 1.4E-39 317.5 22.6 252 463-733 34-300 (302)
179 cd07861 STKc_CDK1_euk Catalyti 100.0 8.8E-35 1.9E-39 311.8 23.3 248 465-724 1-277 (285)
180 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 5.7E-35 1.2E-39 311.1 21.7 233 471-730 2-260 (262)
181 cd05047 PTKc_Tie Catalytic dom 100.0 6.1E-35 1.3E-39 311.6 21.9 245 471-734 2-268 (270)
182 cd07863 STKc_CDK4 Catalytic do 100.0 8.6E-35 1.9E-39 312.6 23.1 247 465-725 1-281 (288)
183 KOG4257 Focal adhesion tyrosin 100.0 1.7E-35 3.7E-40 326.8 17.9 249 468-735 393-650 (974)
184 cd05065 PTKc_EphR_B Catalytic 100.0 3.6E-35 7.7E-40 312.7 20.0 254 465-733 5-267 (269)
185 cd05632 STKc_GRK5 Catalytic do 100.0 4.1E-35 8.9E-40 316.1 20.6 241 466-723 2-250 (285)
186 cd05095 PTKc_DDR2 Catalytic do 100.0 6.2E-35 1.4E-39 316.0 22.1 259 464-732 5-295 (296)
187 cd05050 PTKc_Musk Catalytic do 100.0 4.6E-35 1E-39 315.3 21.0 252 463-732 4-287 (288)
188 cd05597 STKc_DMPK_like Catalyt 100.0 1E-34 2.3E-39 320.2 24.1 245 465-723 2-260 (331)
189 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 5.4E-35 1.2E-39 314.4 21.3 260 464-734 4-283 (284)
190 cd06645 STKc_MAP4K3 Catalytic 100.0 3.9E-35 8.5E-40 311.8 19.9 245 464-724 9-260 (267)
191 cd05034 PTKc_Src_like Catalyti 100.0 8.3E-35 1.8E-39 308.0 22.3 252 463-733 5-260 (261)
192 cd05085 PTKc_Fer Catalytic dom 100.0 1.1E-34 2.4E-39 305.1 23.1 242 471-731 2-248 (250)
193 cd05630 STKc_GRK6 Catalytic do 100.0 4.8E-35 1.1E-39 315.7 20.9 242 466-723 2-250 (285)
194 cd07875 STKc_JNK1 Catalytic do 100.0 6.6E-35 1.4E-39 325.8 22.6 246 462-725 22-314 (364)
195 KOG4279 Serine/threonine prote 100.0 5.9E-36 1.3E-40 332.9 13.9 238 471-725 582-828 (1226)
196 cd05099 PTKc_FGFR4 Catalytic d 100.0 6.2E-35 1.3E-39 319.1 21.8 256 464-737 12-296 (314)
197 cd06638 STKc_myosinIIIA Cataly 100.0 8.6E-35 1.9E-39 312.3 22.5 256 454-725 8-279 (286)
198 cd06655 STKc_PAK2 Catalytic do 100.0 1E-34 2.2E-39 315.0 23.3 246 463-727 18-267 (296)
199 cd05042 PTKc_Aatyk Catalytic d 100.0 1.1E-34 2.3E-39 309.0 22.9 249 471-731 2-267 (269)
200 cd05622 STKc_ROCK1 Catalytic d 100.0 3.5E-35 7.5E-40 329.4 20.0 246 460-723 39-298 (371)
201 cd06631 STKc_YSK4 Catalytic do 100.0 1.9E-34 4.2E-39 306.1 24.4 249 465-725 1-258 (265)
202 cd06612 STKc_MST1_2 Catalytic 100.0 1.1E-34 2.5E-39 305.4 22.5 242 464-724 3-248 (256)
203 PTZ00284 protein kinase; Provi 100.0 5.9E-35 1.3E-39 337.4 22.0 249 459-725 124-434 (467)
204 cd07874 STKc_JNK3 Catalytic do 100.0 5.9E-35 1.3E-39 324.9 20.9 246 462-725 15-307 (355)
205 cd08219 STKc_Nek3 Catalytic do 100.0 9.4E-35 2E-39 306.8 21.3 243 465-725 1-248 (255)
206 PTZ00266 NIMA-related protein 100.0 6.5E-35 1.4E-39 351.4 22.6 252 461-727 10-293 (1021)
207 KOG4278 Protein tyrosine kinas 100.0 1.5E-35 3.3E-40 326.2 15.4 257 457-734 260-523 (1157)
208 cd06613 STKc_MAP4K3_like Catal 100.0 1.7E-34 3.6E-39 305.2 22.9 246 464-724 3-255 (262)
209 cd05112 PTKc_Itk Catalytic dom 100.0 1.4E-34 3E-39 305.4 22.2 247 465-731 5-255 (256)
210 cd07868 STKc_CDK8 Catalytic do 100.0 1.2E-34 2.5E-39 316.8 22.2 194 469-673 6-218 (317)
211 cd07872 STKc_PCTAIRE2 Catalyti 100.0 1.3E-34 2.7E-39 315.7 22.4 248 464-725 6-282 (309)
212 cd05624 STKc_MRCK_beta Catalyt 100.0 1.4E-34 3.1E-39 319.2 22.7 246 464-723 1-260 (331)
213 KOG0032 Ca2+/calmodulin-depend 100.0 1E-34 2.2E-39 323.7 21.8 242 463-725 34-289 (382)
214 cd06656 STKc_PAK3 Catalytic do 100.0 1E-34 2.2E-39 315.1 21.2 243 464-725 19-265 (297)
215 cd05073 PTKc_Hck Catalytic dom 100.0 1.5E-34 3.2E-39 306.7 21.9 249 464-733 6-259 (260)
216 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 5.7E-35 1.2E-39 313.3 18.9 234 471-730 2-272 (274)
217 cd06619 PKc_MKK5 Catalytic dom 100.0 8.8E-35 1.9E-39 312.1 20.2 240 465-724 2-248 (279)
218 cd05044 PTKc_c-ros Catalytic d 100.0 1E-34 2.2E-39 308.6 20.6 246 471-732 2-268 (269)
219 cd05100 PTKc_FGFR3 Catalytic d 100.0 1.9E-34 4.2E-39 318.1 23.4 259 464-738 12-297 (334)
220 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 8.3E-35 1.8E-39 311.2 19.8 259 465-734 5-283 (284)
221 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 1.2E-34 2.6E-39 305.8 20.6 234 471-731 2-258 (259)
222 cd06644 STKc_STK10_LOK Catalyt 100.0 1.8E-34 3.9E-39 311.5 22.3 244 464-724 12-264 (292)
223 cd06609 STKc_MST3_like Catalyt 100.0 2E-34 4.3E-39 307.8 22.3 240 465-725 2-247 (274)
224 cd08223 STKc_Nek4 Catalytic do 100.0 2.1E-34 4.7E-39 303.8 22.0 241 465-725 1-250 (257)
225 cd06651 STKc_MEKK3 Catalytic d 100.0 4E-34 8.7E-39 304.4 24.1 245 464-725 2-257 (266)
226 KOG0196 Tyrosine kinase, EPH ( 100.0 7E-36 1.5E-40 337.9 11.1 269 450-737 606-894 (996)
227 cd05057 PTKc_EGFR_like Catalyt 100.0 2.2E-34 4.7E-39 308.6 22.2 253 464-736 7-270 (279)
228 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 1.3E-34 2.7E-39 311.3 20.3 245 465-724 2-257 (286)
229 cd07867 STKc_CDC2L6 Catalytic 100.0 2.6E-34 5.7E-39 313.5 22.8 193 470-673 7-218 (317)
230 PHA03207 serine/threonine kina 100.0 9.3E-35 2E-39 328.3 19.9 245 464-726 92-372 (392)
231 KOG0033 Ca2+/calmodulin-depend 100.0 2.7E-36 5.8E-41 302.5 6.4 245 464-726 11-264 (355)
232 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 4.9E-35 1.1E-39 310.2 16.3 235 471-731 2-257 (258)
233 cd06652 STKc_MEKK2 Catalytic d 100.0 3.9E-34 8.4E-39 304.1 23.1 244 464-724 2-256 (265)
234 cd06611 STKc_SLK_like Catalyti 100.0 1.4E-34 3E-39 310.1 19.6 245 464-725 5-258 (280)
235 cd06615 PKc_MEK Catalytic doma 100.0 2.7E-34 5.9E-39 313.3 22.2 246 465-725 2-283 (308)
236 cd06639 STKc_myosinIIIB Cataly 100.0 4.3E-34 9.3E-39 308.2 23.4 256 454-725 12-283 (291)
237 PF00069 Pkinase: Protein kina 100.0 8E-35 1.7E-39 306.9 17.2 244 466-725 1-253 (260)
238 cd07878 STKc_p38beta_MAPK11 Ca 100.0 1.5E-34 3.3E-39 319.9 20.2 243 463-725 14-294 (343)
239 cd05041 PTKc_Fes_like Catalyti 100.0 3.4E-34 7.3E-39 301.5 21.8 243 471-731 2-249 (251)
240 KOG1094 Discoidin domain recep 100.0 4.8E-35 1E-39 322.1 15.6 258 465-733 539-803 (807)
241 cd06642 STKc_STK25-YSK1 Cataly 100.0 1.3E-34 2.9E-39 309.9 18.7 241 466-727 6-251 (277)
242 cd05574 STKc_phototropin_like 100.0 5E-34 1.1E-38 311.6 23.5 258 465-731 2-287 (316)
243 cd05586 STKc_Sck1_like Catalyt 100.0 2.9E-35 6.4E-40 324.1 13.8 232 472-724 1-244 (330)
244 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 1.9E-34 4.2E-39 310.0 19.7 248 464-728 5-264 (284)
245 cd07847 STKc_CDKL1_4 Catalytic 100.0 5.9E-34 1.3E-38 305.3 23.1 247 465-725 2-279 (286)
246 smart00219 TyrKc Tyrosine kina 100.0 5.8E-34 1.2E-38 299.7 22.5 245 467-729 2-256 (258)
247 cd05074 PTKc_Tyro3 Catalytic d 100.0 3.8E-34 8.3E-39 304.9 21.2 253 466-734 1-272 (273)
248 cd08221 STKc_Nek9 Catalytic do 100.0 5.3E-34 1.2E-38 300.9 22.0 242 465-727 1-250 (256)
249 cd06632 STKc_MEKK1_plant Catal 100.0 5.5E-34 1.2E-38 300.2 21.9 240 466-725 2-251 (258)
250 cd06640 STKc_MST4 Catalytic do 100.0 5.2E-34 1.1E-38 305.6 22.1 241 465-726 5-250 (277)
251 cd06659 STKc_PAK6 Catalytic do 100.0 4.4E-34 9.4E-39 310.3 21.6 241 466-725 23-267 (297)
252 cd06610 STKc_OSR1_SPAK Catalyt 100.0 7.9E-34 1.7E-38 300.6 23.0 252 464-725 1-260 (267)
253 cd05046 PTK_CCK4 Pseudokinase 100.0 6.3E-34 1.4E-38 303.9 22.3 250 464-731 5-273 (275)
254 cd07873 STKc_PCTAIRE1 Catalyti 100.0 5.2E-34 1.1E-38 309.5 21.9 248 464-725 6-282 (301)
255 KOG2345 Serine/threonine prote 100.0 5.9E-35 1.3E-39 294.2 13.2 265 461-733 18-299 (302)
256 cd06636 STKc_MAP4K4_6 Catalyti 100.0 6E-34 1.3E-38 305.4 21.9 252 455-724 7-274 (282)
257 cd08217 STKc_Nek2 Catalytic do 100.0 5.5E-34 1.2E-38 300.7 21.2 247 465-725 1-258 (265)
258 cd06629 STKc_MAPKKK_Bck1_like 100.0 8.6E-34 1.9E-38 302.3 22.8 248 465-725 2-265 (272)
259 cd08227 PK_STRAD_alpha Pseudok 100.0 8.5E-34 1.8E-38 312.1 23.2 252 469-725 3-303 (327)
260 cd05086 PTKc_Aatyk2 Catalytic 100.0 8.8E-34 1.9E-38 302.6 22.3 247 471-731 2-266 (268)
261 cd06630 STKc_MEKK1 Catalytic d 100.0 4.6E-34 1E-38 303.2 20.1 249 465-725 1-260 (268)
262 KOG0608 Warts/lats-like serine 100.0 2.2E-34 4.8E-39 318.2 18.0 221 465-691 630-891 (1034)
263 cd07846 STKc_CDKL2_3 Catalytic 100.0 3.6E-34 7.7E-39 307.3 19.2 247 465-725 2-279 (286)
264 cd06608 STKc_myosinIII_like Ca 100.0 8.4E-34 1.8E-38 301.3 21.5 249 461-725 3-268 (275)
265 cd06658 STKc_PAK5 Catalytic do 100.0 3.4E-34 7.3E-39 310.4 18.7 242 466-726 24-269 (292)
266 cd06626 STKc_MEKK4 Catalytic d 100.0 1.7E-33 3.6E-38 297.9 22.7 247 465-725 1-257 (264)
267 cd08218 STKc_Nek1 Catalytic do 100.0 9.1E-34 2E-38 299.1 20.5 244 465-726 1-250 (256)
268 KOG0599 Phosphorylase kinase g 100.0 1E-34 2.2E-39 294.9 12.6 244 464-727 17-281 (411)
269 cd08528 STKc_Nek10 Catalytic d 100.0 9.5E-34 2.1E-38 301.5 20.7 250 465-731 1-267 (269)
270 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 2.3E-33 4.9E-38 302.4 23.8 245 465-724 2-261 (287)
271 cd07833 STKc_CDKL Catalytic do 100.0 1.1E-33 2.3E-38 303.6 21.1 247 465-724 2-280 (288)
272 cd06647 STKc_PAK_I Catalytic d 100.0 1E-33 2.2E-38 306.6 21.1 245 464-727 19-267 (293)
273 cd06614 STKc_PAK Catalytic dom 100.0 1.8E-33 3.8E-38 302.7 22.4 247 461-725 16-266 (286)
274 cd07844 STKc_PCTAIRE_like Cata 100.0 2.5E-33 5.5E-38 301.9 23.6 248 464-725 5-284 (291)
275 KOG0612 Rho-associated, coiled 100.0 6.1E-35 1.3E-39 341.6 11.8 243 463-722 74-328 (1317)
276 KOG0986 G protein-coupled rece 100.0 1.1E-34 2.3E-39 312.1 12.6 245 463-723 184-435 (591)
277 cd07832 STKc_CCRK Catalytic do 100.0 1.3E-33 2.9E-38 302.5 21.1 248 465-725 1-278 (286)
278 cd05609 STKc_MAST Catalytic do 100.0 2.1E-33 4.5E-38 305.6 22.8 249 465-723 2-264 (305)
279 KOG0574 STE20-like serine/thre 100.0 1.3E-35 2.9E-40 304.2 5.1 242 465-725 34-279 (502)
280 cd08220 STKc_Nek8 Catalytic do 100.0 1.4E-33 3E-38 297.1 20.6 243 465-726 1-250 (256)
281 cd07841 STKc_CDK7 Catalytic do 100.0 2E-33 4.4E-38 303.7 22.4 247 465-725 1-278 (298)
282 cd05580 STKc_PKA Catalytic dom 100.0 9.7E-34 2.1E-38 305.8 19.8 235 465-723 2-243 (290)
283 cd06917 STKc_NAK1_like Catalyt 100.0 2.2E-33 4.7E-38 300.0 22.2 241 465-726 2-252 (277)
284 KOG0579 Ste20-like serine/thre 100.0 6.7E-35 1.5E-39 321.5 10.7 244 466-726 34-286 (1187)
285 KOG0577 Serine/threonine prote 100.0 8.8E-35 1.9E-39 319.5 11.6 234 465-723 27-272 (948)
286 cd06648 STKc_PAK_II Catalytic 100.0 2.5E-33 5.5E-38 302.2 22.7 241 466-725 21-265 (285)
287 cd05122 PKc_STE Catalytic doma 100.0 4.1E-33 8.8E-38 290.9 23.5 243 465-725 1-247 (253)
288 PHA03209 serine/threonine kina 100.0 8.9E-34 1.9E-38 316.3 19.7 188 464-672 66-258 (357)
289 PHA03211 serine/threonine kina 100.0 1.1E-33 2.3E-38 324.9 20.9 191 463-671 168-362 (461)
290 cd06641 STKc_MST3 Catalytic do 100.0 3.4E-33 7.4E-38 299.3 23.3 239 466-725 6-249 (277)
291 cd07870 STKc_PFTAIRE2 Catalyti 100.0 3.7E-33 8E-38 300.9 23.4 250 462-725 3-284 (291)
292 KOG4717 Serine/threonine prote 100.0 6.2E-34 1.3E-38 308.6 17.3 240 464-724 18-265 (864)
293 cd05578 STKc_Yank1 Catalytic d 100.0 7.2E-34 1.6E-38 300.5 17.4 238 465-723 1-247 (258)
294 cd07860 STKc_CDK2_3 Catalytic 100.0 2.1E-33 4.6E-38 301.2 21.3 248 465-725 1-277 (284)
295 cd07839 STKc_CDK5 Catalytic do 100.0 1.9E-33 4.1E-38 301.6 20.7 247 465-725 1-277 (284)
296 cd07836 STKc_Pho85 Catalytic d 100.0 3.2E-33 7E-38 299.5 21.9 249 465-725 1-277 (284)
297 cd08225 STKc_Nek5 Catalytic do 100.0 2.2E-33 4.8E-38 295.7 20.1 243 465-725 1-250 (257)
298 cd07835 STKc_CDK1_like Catalyt 100.0 4.1E-33 8.9E-38 298.8 22.0 247 466-725 1-276 (283)
299 cd06653 STKc_MEKK3_like_1 Cata 100.0 5.8E-33 1.3E-37 295.1 22.9 244 464-724 2-256 (264)
300 cd07837 STKc_CdkB_plant Cataly 100.0 5.4E-33 1.2E-37 299.7 22.8 247 465-725 2-287 (295)
301 PHA02882 putative serine/threo 100.0 2.8E-33 6.1E-38 303.4 20.3 257 464-731 12-293 (294)
302 cd06617 PKc_MKK3_6 Catalytic d 100.0 4E-33 8.8E-38 298.6 21.2 242 465-724 2-256 (283)
303 cd07842 STKc_CDK8_like Catalyt 100.0 4.6E-33 1E-37 303.0 21.9 201 465-674 1-219 (316)
304 cd07849 STKc_ERK1_2_like Catal 100.0 4.6E-33 9.9E-38 307.4 22.1 250 463-725 4-288 (336)
305 cd07843 STKc_CDC2L1 Catalytic 100.0 4.6E-33 1E-37 300.5 21.7 248 464-725 5-286 (293)
306 cd05579 STKc_MAST_like Catalyt 100.0 3E-33 6.5E-38 295.1 19.6 245 472-730 1-254 (265)
307 cd06623 PKc_MAPKK_plant_like C 100.0 4.6E-33 9.9E-38 294.2 20.9 243 465-725 2-252 (264)
308 cd06606 STKc_MAPKKK Catalytic 100.0 7.7E-33 1.7E-37 290.0 22.3 246 465-726 1-254 (260)
309 cd05577 STKc_GRK Catalytic dom 100.0 2.8E-33 6E-38 300.0 19.3 236 472-725 1-245 (277)
310 cd05572 STKc_cGK_PKG Catalytic 100.0 2.3E-33 5E-38 297.4 18.4 232 472-724 1-242 (262)
311 cd06605 PKc_MAPKK Catalytic do 100.0 2.7E-33 5.8E-38 296.8 18.2 242 465-725 2-253 (265)
312 KOG0690 Serine/threonine prote 100.0 1.7E-34 3.8E-39 298.9 8.8 238 464-722 168-412 (516)
313 cd06607 STKc_TAO Catalytic dom 100.0 9.9E-33 2.1E-37 300.5 23.0 240 464-726 15-264 (307)
314 cd06616 PKc_MKK4 Catalytic dom 100.0 4.6E-33 1E-37 299.5 20.1 248 465-725 5-263 (288)
315 cd06627 STKc_Cdc7_like Catalyt 100.0 1.4E-32 2.9E-37 288.6 22.6 241 465-725 1-247 (254)
316 cd08216 PK_STRAD Pseudokinase 100.0 9.9E-33 2.2E-37 300.9 22.0 252 468-724 6-290 (314)
317 cd07865 STKc_CDK9 Catalytic do 100.0 1.5E-32 3.2E-37 297.9 22.6 252 464-725 12-303 (310)
318 KOG0596 Dual specificity; seri 100.0 1.1E-33 2.3E-38 310.8 13.4 247 461-725 358-623 (677)
319 cd07855 STKc_ERK5 Catalytic do 100.0 6.7E-33 1.5E-37 305.8 19.8 251 464-725 5-290 (334)
320 cd08215 STKc_Nek Catalytic dom 100.0 1.2E-32 2.6E-37 289.0 20.7 244 465-725 1-251 (258)
321 cd06657 STKc_PAK4 Catalytic do 100.0 1.6E-32 3.4E-37 297.5 22.2 240 467-725 23-266 (292)
322 cd07850 STKc_JNK Catalytic dom 100.0 1.7E-32 3.6E-37 305.2 22.8 246 463-726 15-308 (353)
323 cd07845 STKc_CDK10 Catalytic d 100.0 2E-32 4.4E-37 298.2 22.8 248 463-724 6-285 (309)
324 cd07840 STKc_CDK9_like Catalyt 100.0 1.9E-32 4E-37 293.2 21.8 247 466-725 1-280 (287)
325 PLN00009 cyclin-dependent kina 100.0 2.1E-32 4.6E-37 295.5 22.3 250 464-726 2-281 (294)
326 PLN00113 leucine-rich repeat r 100.0 1.4E-32 2.9E-37 344.6 23.9 249 464-736 690-953 (968)
327 cd05633 STKc_GRK3 Catalytic do 100.0 1.3E-32 2.7E-37 296.0 20.3 231 471-722 1-243 (279)
328 PHA03390 pk1 serine/threonine- 100.0 2E-32 4.3E-37 292.5 21.6 239 463-727 13-259 (267)
329 cd06635 STKc_TAO1 Catalytic do 100.0 3.8E-32 8.3E-37 297.6 24.2 240 465-728 26-275 (317)
330 cd07831 STKc_MOK Catalytic dom 100.0 3.1E-32 6.6E-37 291.4 22.4 243 466-724 1-274 (282)
331 cd05613 STKc_MSK1_N N-terminal 100.0 6.8E-33 1.5E-37 298.7 17.3 241 465-723 1-257 (290)
332 cd05581 STKc_PDK1 Catalytic do 100.0 1.8E-32 3.9E-37 292.2 20.3 246 465-723 2-267 (280)
333 cd07877 STKc_p38alpha_MAPK14 C 100.0 2.3E-32 5E-37 303.3 21.9 256 451-725 4-296 (345)
334 cd05118 STKc_CMGC Catalytic do 100.0 3E-32 6.6E-37 291.3 21.9 246 466-725 1-276 (283)
335 cd05611 STKc_Rim15_like Cataly 100.0 2.1E-32 4.5E-37 289.7 20.4 231 470-723 2-242 (260)
336 cd07858 STKc_TEY_MAPK_plant Ca 100.0 1.9E-32 4E-37 302.8 20.7 249 463-726 4-288 (337)
337 cd07864 STKc_CDK12 Catalytic d 100.0 3.7E-32 8.1E-37 294.2 22.5 250 463-725 6-295 (302)
338 cd07866 STKc_BUR1 Catalytic do 100.0 3.1E-32 6.6E-37 295.6 21.8 257 463-725 7-304 (311)
339 KOG4250 TANK binding protein k 100.0 2.5E-33 5.3E-38 316.9 12.7 196 465-672 14-225 (732)
340 KOG0667 Dual-specificity tyros 100.0 7.2E-33 1.6E-37 312.6 16.4 197 465-678 187-395 (586)
341 cd07852 STKc_MAPK15 Catalytic 100.0 2.1E-32 4.5E-37 302.1 19.8 254 463-727 6-293 (337)
342 cd05606 STKc_beta_ARK Catalyti 100.0 3.8E-32 8.2E-37 291.9 21.2 230 471-721 1-242 (278)
343 KOG0696 Serine/threonine prote 100.0 2.8E-33 6.1E-38 297.1 12.0 238 464-722 349-594 (683)
344 KOG4645 MAPKKK (MAP kinase kin 100.0 6.6E-34 1.4E-38 336.6 8.0 248 461-723 1232-1488(1509)
345 cd06618 PKc_MKK7 Catalytic dom 100.0 4.7E-32 1E-36 293.5 21.8 245 464-725 15-269 (296)
346 cd05583 STKc_MSK_N N-terminal 100.0 1.6E-32 3.5E-37 295.5 17.9 248 465-731 1-264 (288)
347 cd07879 STKc_p38delta_MAPK13 C 100.0 3.8E-32 8.2E-37 301.1 21.2 243 464-726 15-294 (342)
348 cd08530 STKc_CNK2-like Catalyt 100.0 4.6E-32 9.9E-37 285.3 20.8 242 465-725 1-249 (256)
349 cd07838 STKc_CDK4_6_like Catal 100.0 1E-31 2.2E-36 287.8 23.4 246 466-725 1-280 (287)
350 cd08222 STKc_Nek11 Catalytic d 100.0 4.6E-32 9.9E-37 287.1 20.4 243 465-725 1-253 (260)
351 KOG0584 Serine/threonine prote 100.0 4.8E-33 1.1E-37 311.2 13.4 238 468-728 44-295 (632)
352 cd07830 STKc_MAK_like Catalyti 100.0 4.4E-32 9.5E-37 290.6 20.1 246 466-725 1-276 (283)
353 cd08226 PK_STRAD_beta Pseudoki 100.0 8.5E-32 1.8E-36 296.3 22.7 252 471-727 5-306 (328)
354 cd07880 STKc_p38gamma_MAPK12 C 100.0 5.7E-32 1.2E-36 299.9 21.4 246 462-726 13-295 (343)
355 PHA03210 serine/threonine kina 100.0 1.3E-32 2.9E-37 320.3 17.0 198 464-672 148-370 (501)
356 cd07854 STKc_MAPK4_6 Catalytic 100.0 4.5E-32 9.7E-37 300.5 20.3 250 463-725 4-296 (342)
357 cd07834 STKc_MAPK Catalytic do 100.0 4.4E-32 9.6E-37 298.1 19.9 249 465-725 1-285 (330)
358 KOG0666 Cyclin C-dependent kin 100.0 6.9E-33 1.5E-37 286.2 11.6 252 465-725 25-333 (438)
359 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 8.6E-32 1.9E-36 296.7 21.2 248 459-725 5-284 (328)
360 cd06634 STKc_TAO2 Catalytic do 100.0 1.2E-31 2.6E-36 292.5 21.9 237 465-727 16-264 (308)
361 PTZ00024 cyclin-dependent prot 100.0 1.3E-31 2.9E-36 295.3 22.2 254 465-725 9-309 (335)
362 cd07857 STKc_MPK1 Catalytic do 100.0 1.3E-31 2.7E-36 295.4 21.8 250 465-725 1-288 (332)
363 cd07829 STKc_CDK_like Catalyti 100.0 1.1E-31 2.5E-36 286.7 20.6 246 466-725 1-275 (282)
364 KOG0983 Mitogen-activated prot 100.0 1.6E-32 3.4E-37 279.3 12.7 238 469-724 97-344 (391)
365 cd06633 STKc_TAO3 Catalytic do 100.0 3.1E-31 6.7E-36 290.1 23.6 237 466-725 23-269 (313)
366 cd05123 STKc_AGC Catalytic dom 100.0 1.3E-31 2.9E-36 281.0 18.9 232 472-724 1-239 (250)
367 KOG1035 eIF-2alpha kinase GCN2 100.0 3.6E-32 7.9E-37 320.8 15.8 255 463-727 478-869 (1351)
368 KOG0586 Serine/threonine prote 100.0 4.7E-32 1E-36 303.1 15.1 244 461-726 53-303 (596)
369 KOG1025 Epidermal growth facto 100.0 1.1E-31 2.5E-36 304.4 18.1 251 466-736 698-959 (1177)
370 cd07851 STKc_p38 Catalytic dom 100.0 1.3E-31 2.7E-36 297.1 18.1 245 462-725 13-294 (343)
371 KOG3653 Transforming growth fa 100.0 1.5E-31 3.2E-36 290.1 16.5 257 465-738 211-507 (534)
372 KOG0614 cGMP-dependent protein 100.0 9.2E-33 2E-37 299.9 6.2 238 466-723 422-666 (732)
373 cd05610 STKc_MASTL Catalytic d 100.0 7.7E-31 1.7E-35 315.0 23.3 143 464-612 4-153 (669)
374 KOG0607 MAP kinase-interacting 100.0 1.1E-31 2.4E-36 278.0 13.4 248 470-725 84-357 (463)
375 cd05576 STKc_RPK118_like Catal 100.0 4.2E-31 9.1E-36 277.1 16.8 217 475-724 4-224 (237)
376 KOG2052 Activin A type IB rece 100.0 3.9E-31 8.5E-36 285.0 16.1 259 464-734 211-503 (513)
377 KOG0587 Traf2- and Nck-interac 100.0 1.3E-30 2.9E-35 299.5 20.0 254 456-726 11-279 (953)
378 KOG0604 MAP kinase-activated p 100.0 1.9E-31 4.1E-36 274.6 10.9 244 462-724 59-317 (400)
379 KOG0200 Fibroblast/platelet-de 100.0 1.9E-30 4.1E-35 307.7 20.9 252 464-734 296-579 (609)
380 KOG0669 Cyclin T-dependent kin 100.0 5.9E-32 1.3E-36 272.2 5.9 252 464-725 17-311 (376)
381 KOG4236 Serine/threonine prote 100.0 4.4E-31 9.5E-36 287.2 11.4 238 469-725 569-815 (888)
382 KOG0662 Cyclin-dependent kinas 100.0 1.5E-30 3.3E-35 250.3 13.7 199 465-677 3-209 (292)
383 KOG1006 Mitogen-activated prot 100.0 4.5E-32 9.7E-37 275.3 2.5 241 468-723 68-321 (361)
384 smart00220 S_TKc Serine/Threon 100.0 2.5E-29 5.4E-34 260.1 19.5 230 476-725 1-237 (244)
385 KOG0695 Serine/threonine prote 100.0 3.5E-30 7.6E-35 267.5 11.2 243 464-721 250-502 (593)
386 KOG0603 Ribosomal protein S6 k 100.0 7E-30 1.5E-34 287.2 13.9 233 463-725 321-559 (612)
387 PLN03225 Serine/threonine-prot 100.0 9.5E-29 2.1E-33 290.6 18.9 250 462-725 130-446 (566)
388 PLN03224 probable serine/threo 100.0 4.7E-28 1E-32 278.9 21.8 254 462-725 143-496 (507)
389 KOG1027 Serine/threonine prote 100.0 2E-29 4.3E-34 288.8 8.7 245 465-727 510-765 (903)
390 KOG0668 Casein kinase II, alph 100.0 4.6E-29 1E-33 248.4 9.8 260 445-725 18-318 (338)
391 KOG0671 LAMMER dual specificit 100.0 8.5E-29 1.9E-33 263.1 9.2 248 463-727 88-404 (415)
392 KOG0576 Mitogen-activated prot 100.0 7.1E-29 1.5E-33 277.6 8.1 249 463-727 14-269 (829)
393 KOG1024 Receptor-like protein 99.9 1.2E-27 2.6E-32 253.6 13.1 262 458-735 278-556 (563)
394 KOG0984 Mitogen-activated prot 99.9 4.6E-28 9.9E-33 238.4 8.5 197 465-673 47-254 (282)
395 cd00180 PKc Catalytic domain o 99.9 2.1E-26 4.5E-31 231.7 20.6 204 472-727 1-211 (215)
396 smart00221 STYKc Protein kinas 99.9 4.2E-26 9.1E-31 234.3 18.9 196 466-673 1-202 (225)
397 KOG1152 Signal transduction se 99.9 4.2E-27 9.1E-32 259.6 8.9 192 465-672 562-770 (772)
398 KOG0664 Nemo-like MAPK-related 99.9 4.4E-28 9.4E-33 246.4 -0.0 199 465-677 54-264 (449)
399 KOG0670 U4/U6-associated splic 99.9 1.5E-26 3.3E-31 252.3 6.3 198 462-674 430-638 (752)
400 KOG0665 Jun-N-terminal kinase 99.9 8.6E-26 1.9E-30 235.4 11.1 242 464-724 17-305 (369)
401 KOG1167 Serine/threonine prote 99.9 2.2E-25 4.8E-30 240.2 11.9 199 463-672 35-279 (418)
402 KOG1290 Serine/threonine prote 99.9 2.5E-24 5.4E-29 234.4 16.7 130 463-597 77-222 (590)
403 PLN00181 protein SPA1-RELATED; 99.9 7E-25 1.5E-29 269.1 11.0 199 515-727 28-263 (793)
404 KOG1164 Casein kinase (serine/ 99.9 1.2E-22 2.7E-27 223.6 22.6 263 465-737 19-300 (322)
405 smart00750 KIND kinase non-cat 99.9 2.8E-23 6E-28 207.2 15.8 165 542-734 1-169 (176)
406 KOG1345 Serine/threonine kinas 99.9 4.8E-24 1E-28 217.5 8.2 234 464-721 24-276 (378)
407 PRK09188 serine/threonine prot 99.9 3.7E-23 8.1E-28 229.2 13.4 172 460-646 14-195 (365)
408 KOG0195 Integrin-linked kinase 99.9 3E-23 6.5E-28 211.3 7.6 248 466-734 192-446 (448)
409 COG0515 SPS1 Serine/threonine 99.9 6E-21 1.3E-25 202.8 23.9 258 466-729 2-275 (384)
410 KOG1165 Casein kinase (serine/ 99.9 3.5E-21 7.6E-26 201.5 16.7 261 462-734 26-299 (449)
411 KOG1163 Casein kinase (serine/ 99.9 3.2E-21 6.9E-26 194.1 14.2 248 463-723 14-274 (341)
412 KOG1240 Protein kinase contain 99.8 6.3E-21 1.4E-25 223.9 7.7 247 465-729 24-290 (1431)
413 PRK10359 lipopolysaccharide co 99.8 1.5E-20 3.3E-25 195.0 8.4 170 462-666 29-217 (232)
414 cd05147 RIO1_euk RIO kinase fa 99.8 5.7E-20 1.2E-24 187.2 10.8 137 470-613 3-167 (190)
415 KOG0590 Checkpoint kinase and 99.8 1.7E-20 3.7E-25 220.8 5.0 247 467-724 321-580 (601)
416 PRK12274 serine/threonine prot 99.8 2E-19 4.3E-24 183.3 11.5 192 467-673 5-209 (218)
417 KOG0603 Ribosomal protein S6 k 99.8 2.8E-20 6.1E-25 210.0 4.7 221 472-723 2-232 (612)
418 cd05145 RIO1_like RIO kinase f 99.8 1E-18 2.2E-23 177.8 12.6 140 469-614 2-168 (190)
419 PRK10345 hypothetical protein; 99.7 8.8E-18 1.9E-22 173.3 11.8 134 467-610 5-156 (210)
420 PF14531 Kinase-like: Kinase-l 99.7 3.7E-17 8.1E-22 174.6 14.6 230 465-720 13-288 (288)
421 KOG0606 Microtubule-associated 99.7 8.8E-18 1.9E-22 197.9 10.7 216 462-723 81-306 (1205)
422 TIGR03724 arch_bud32 Kae1-asso 99.7 5E-17 1.1E-21 165.9 12.3 128 471-612 1-138 (199)
423 PRK14879 serine/threonine prot 99.7 5.3E-17 1.2E-21 167.1 12.3 132 470-612 2-143 (211)
424 KOG1023 Natriuretic peptide re 99.7 2.9E-17 6.3E-22 185.8 10.0 208 513-734 1-224 (484)
425 smart00090 RIO RIO-like kinase 99.7 5.5E-17 1.2E-21 170.9 11.5 140 465-613 29-198 (237)
426 KOG4158 BRPK/PTEN-induced prot 99.7 1.4E-16 3.1E-21 170.3 13.3 200 517-732 274-512 (598)
427 KOG1166 Mitotic checkpoint ser 99.7 2E-16 4.4E-21 190.2 15.9 195 458-668 692-900 (974)
428 PF04564 U-box: U-box domain; 99.7 1.4E-17 2.9E-22 142.6 4.0 71 754-824 1-71 (73)
429 PRK09605 bifunctional UGMP fam 99.7 2.3E-16 5E-21 185.6 12.4 136 462-612 331-476 (535)
430 KOG1033 eIF-2alpha kinase PEK/ 99.7 4.5E-17 9.9E-22 181.1 4.8 176 531-723 330-506 (516)
431 cd05144 RIO2_C RIO kinase fami 99.7 4.7E-16 1E-20 159.2 11.9 136 465-614 16-176 (198)
432 cd05120 APH_ChoK_like Aminogly 99.6 4.7E-15 1E-19 142.0 12.6 132 469-612 3-138 (155)
433 PRK01723 3-deoxy-D-manno-octul 99.5 4.6E-14 1E-18 149.0 12.5 132 470-612 37-191 (239)
434 cd05119 RIO RIO kinase family, 99.5 3.1E-14 6.6E-19 143.8 10.6 137 469-614 2-165 (187)
435 KOG0590 Checkpoint kinase and 99.4 9.5E-15 2.1E-19 172.4 -0.5 244 464-723 20-280 (601)
436 cd05151 ChoK Choline Kinase (C 99.4 2.8E-12 6E-17 127.1 10.1 129 470-611 4-135 (170)
437 TIGR01982 UbiB 2-polyprenylphe 99.3 3.3E-12 7.1E-17 146.3 9.8 137 470-614 123-308 (437)
438 KOG1266 Protein kinase [Signal 99.3 1.8E-12 3.9E-17 136.6 4.7 209 507-730 115-332 (458)
439 cd01989 STK_N The N-terminal d 99.2 1.2E-10 2.6E-15 112.9 13.1 96 38-135 51-146 (146)
440 smart00504 Ubox Modified RING 99.2 2.1E-11 4.5E-16 101.2 3.7 63 757-820 1-63 (63)
441 KOG0606 Microtubule-associated 99.1 2.6E-11 5.6E-16 144.1 4.7 251 464-724 804-1084(1205)
442 cd05154 ACAD10_11_like Acyl-Co 99.1 6.4E-10 1.4E-14 114.7 13.1 139 470-612 4-206 (223)
443 KOG0601 Cyclin-dependent kinas 99.1 8.8E-11 1.9E-15 133.6 6.8 242 465-723 115-373 (524)
444 COG3642 Mn2+-dependent serine/ 99.1 5.9E-10 1.3E-14 110.5 11.6 128 471-612 3-140 (204)
445 PRK04750 ubiB putative ubiquin 99.1 2.1E-10 4.5E-15 133.4 9.4 144 465-616 121-317 (537)
446 cd05146 RIO3_euk RIO kinase fa 99.1 1.1E-09 2.4E-14 111.7 12.7 134 470-613 3-174 (197)
447 KOG3087 Serine/threonine prote 99.0 4.8E-09 1E-13 103.6 12.5 141 468-612 11-165 (229)
448 KOG0601 Cyclin-dependent kinas 99.0 5.3E-10 1.2E-14 127.4 5.8 235 462-723 263-508 (524)
449 KOG1243 Protein kinase [Genera 99.0 5.7E-09 1.2E-13 120.1 14.0 161 487-667 37-199 (690)
450 COG4248 Uncharacterized protei 98.9 4.6E-08 1E-12 106.9 18.2 254 467-737 14-303 (637)
451 KOG3741 Poly(A) ribonuclease s 98.8 1.8E-07 4E-12 104.8 16.6 164 478-669 290-474 (655)
452 KOG4642 Chaperone-dependent E3 98.7 7.1E-09 1.5E-13 105.4 3.8 73 752-824 206-278 (284)
453 PRK15123 lipopolysaccharide co 98.7 1.4E-07 2.9E-12 101.3 13.1 137 471-611 29-193 (268)
454 PF01163 RIO1: RIO1 family; I 98.7 8.3E-08 1.8E-12 97.5 9.7 124 479-613 1-156 (188)
455 KOG2137 Protein kinase [Signal 98.4 6.2E-08 1.3E-12 112.1 1.9 151 568-723 107-259 (700)
456 PF06293 Kdo: Lipopolysacchari 98.4 8.9E-07 1.9E-11 91.5 10.1 104 503-612 55-170 (206)
457 PRK09902 hypothetical protein; 98.4 3.3E-06 7.1E-11 86.8 13.1 135 472-611 26-178 (216)
458 COG0478 RIO-like serine/threon 98.3 1.9E-06 4.2E-11 90.5 10.1 133 466-611 93-250 (304)
459 TIGR02172 Fb_sc_TIGR02172 Fibr 98.2 1E-05 2.2E-10 84.8 12.0 131 469-611 6-181 (226)
460 PF01636 APH: Phosphotransfera 98.2 1.1E-05 2.4E-10 83.4 11.6 140 470-611 3-196 (239)
461 PF06176 WaaY: Lipopolysacchar 98.1 8.9E-06 1.9E-10 84.0 9.4 135 462-611 29-182 (229)
462 COG0661 AarF Predicted unusual 98.0 1.5E-05 3.2E-10 92.7 9.8 139 470-615 131-317 (517)
463 PF12260 PIP49_C: Protein-kina 98.0 1.7E-05 3.6E-10 80.9 9.0 106 507-614 7-113 (188)
464 KOG0576 Mitogen-activated prot 98.0 1.2E-06 2.5E-11 100.6 -0.2 191 459-673 237-432 (829)
465 cd05150 APH Aminoglycoside 3'- 98.0 4.3E-05 9.2E-10 80.7 11.3 137 472-611 6-192 (244)
466 COG2112 Predicted Ser/Thr prot 97.9 4.6E-05 9.9E-10 75.6 8.6 128 467-611 25-154 (201)
467 PLN02876 acyl-CoA dehydrogenas 97.9 0.00011 2.5E-09 91.2 14.2 145 469-613 43-258 (822)
468 cd05155 APH_ChoK_like_1 Unchar 97.9 6.3E-05 1.4E-09 79.1 10.3 71 470-545 3-82 (235)
469 KOG2042 Ubiquitin fusion degra 97.8 1.4E-05 3.1E-10 96.2 3.9 74 750-824 863-937 (943)
470 COG1718 RIO1 Serine/threonine 97.8 0.00018 3.8E-09 75.3 11.3 135 471-614 55-217 (268)
471 cd01987 USP_OKCHK USP domain i 97.8 0.00011 2.4E-09 68.9 9.0 77 50-132 47-123 (124)
472 TIGR02721 ycfN_thiK thiamine k 97.7 0.00014 3E-09 77.6 9.5 137 472-611 4-174 (256)
473 KOG1235 Predicted unusual prot 97.7 0.00014 3.1E-09 84.5 10.1 139 470-615 167-357 (538)
474 COG5113 UFD2 Ubiquitin fusion 97.6 7.1E-05 1.5E-09 85.0 6.3 75 748-823 845-920 (929)
475 PRK05231 homoserine kinase; Pr 97.6 0.00054 1.2E-08 75.4 12.7 139 470-611 28-216 (319)
476 PRK10593 hypothetical protein; 97.6 0.00063 1.4E-08 74.4 13.0 73 470-544 20-100 (297)
477 cd05157 ETNK_euk Ethanolamine 97.6 0.00032 6.9E-09 73.5 10.3 139 470-611 4-200 (235)
478 cd05153 HomoserineK_II Homoser 97.5 0.00045 9.8E-09 75.1 10.1 140 469-611 19-204 (296)
479 PRK09550 mtnK methylthioribose 97.5 0.0008 1.7E-08 76.2 12.2 74 470-543 32-117 (401)
480 cd01988 Na_H_Antiporter_C The 97.4 0.00092 2E-08 62.9 9.3 82 46-132 50-131 (132)
481 PRK15118 universal stress glob 97.3 0.00067 1.4E-08 65.5 8.2 80 42-132 58-137 (144)
482 PF13095 FTA2: Kinetochore Sim 97.3 0.0017 3.8E-08 66.4 11.2 123 464-610 37-206 (207)
483 PF00582 Usp: Universal stress 97.3 0.00056 1.2E-08 64.0 7.0 69 59-132 71-139 (140)
484 cd00293 USP_Like Usp: Universa 97.3 0.0014 3E-08 60.6 9.4 86 41-132 45-130 (130)
485 KOG1826 Ras GTPase activating 97.3 9.3E-05 2E-09 92.0 1.4 175 489-671 1254-1440(2724)
486 TIGR00938 thrB_alt homoserine 97.2 0.0046 1E-07 67.8 13.5 141 469-611 27-216 (307)
487 PRK15456 universal stress prot 97.2 0.0022 4.8E-08 61.7 9.5 86 40-132 56-141 (142)
488 cd05156 ChoK_euk Choline Kinas 97.2 0.0015 3.2E-08 71.3 9.3 138 471-611 5-212 (302)
489 PRK15005 universal stress prot 97.1 0.0022 4.9E-08 61.6 9.3 81 45-132 63-143 (144)
490 PF10707 YrbL-PhoP_reg: PhoP r 96.9 0.0068 1.5E-07 62.3 11.1 126 468-606 5-165 (199)
491 PRK11175 universal stress prot 96.8 0.0073 1.6E-07 65.9 11.0 94 36-134 53-146 (305)
492 PLN02236 choline kinase 96.8 0.0066 1.4E-07 67.9 10.8 138 471-611 43-230 (344)
493 PRK10116 universal stress prot 96.8 0.0091 2E-07 57.2 10.1 86 37-132 52-137 (142)
494 PLN02756 S-methyl-5-thioribose 96.7 0.018 3.9E-07 65.3 13.4 79 469-547 37-127 (418)
495 KOG1035 eIF-2alpha kinase GCN2 96.6 0.0047 1E-07 76.3 8.4 188 507-725 230-430 (1351)
496 TIGR01767 MTRK 5-methylthiorib 96.5 0.019 4.1E-07 64.1 11.7 78 471-548 2-92 (370)
497 COG3173 Predicted aminoglycosi 96.5 0.019 4E-07 63.2 11.4 132 474-614 34-230 (321)
498 PF11789 zf-Nse: Zinc-finger o 96.5 0.0011 2.5E-08 53.7 1.2 43 757-799 11-55 (57)
499 KOG2268 Serine/threonine prote 96.3 0.003 6.6E-08 68.3 3.3 148 451-612 76-251 (465)
500 PRK11175 universal stress prot 96.1 0.017 3.7E-07 63.0 8.6 84 42-133 216-299 (305)
No 1
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6e-49 Score=436.55 Aligned_cols=275 Identities=45% Similarity=0.795 Sum_probs=235.6
Q ss_pred ccCCCChhhHhhhcCCCCccceeeecCceEEEEEEECC-eEEEEEEecCCCCCCchhHHHHHHHHHhcCCCceeeEeccc
Q 003384 450 FFSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLRH-MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC 528 (824)
Q Consensus 450 ~~~~~~~~ei~~~~~~f~~~~~LG~G~fG~Vykg~~~~-~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~ 528 (824)
....|++.++..+|++|+....||+||||.||+|...+ ..||||++.....+...+|.+|+.+|.+++|||+|+|+|||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC 140 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC 140 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence 56779999999999999999999999999999999987 89999988775543144699999999999999999999999
Q ss_pred C--C-ceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceee
Q 003384 529 P--E-VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLS 605 (824)
Q Consensus 529 ~--~-~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~ 605 (824)
. + ..+|||||+++|+|.++|+..... +|+|.+|++||.++|+||+|||...+.+||||||||+|||||+++.+||+
T Consensus 141 ~e~~~~~~LVYEym~nGsL~d~L~~~~~~-~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKls 219 (361)
T KOG1187|consen 141 LEGGEHRLLVYEYMPNGSLEDHLHGKKGE-PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLS 219 (361)
T ss_pred ecCCceEEEEEEccCCCCHHHHhCCCCCC-CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEcc
Confidence 4 3 379999999999999999866544 89999999999999999999999776789999999999999999999999
Q ss_pred cccccccccc-ccccCCCccccccCCC-CCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCc---------
Q 003384 606 DFGISRFLSQ-NEISSNNTTLCCRTDP-KGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGIT--------- 674 (824)
Q Consensus 606 DFGla~~~~~-~~~~~~~~~~~~~~~~-~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~--------- 674 (824)
|||+|+.... .... ... .||.+|+|||++..+..+.++|||||||+|+||+||+++.+..
T Consensus 220 DFGLa~~~~~~~~~~---------~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~ 290 (361)
T KOG1187|consen 220 DFGLAKLGPEGDTSV---------STTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLV 290 (361)
T ss_pred CccCcccCCccccce---------eeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHH
Confidence 9999976543 2110 111 6999999999999999999999999999999999999988732
Q ss_pred hHHHHHHhhhccccccCCCC--CCCCh-hhHHHHHHHHHHHhhhccCCCCChHHHHHHHHHHHH
Q 003384 675 KEVQYALDTGKLKNLLDPLA--GDWPF-VQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMR 735 (824)
Q Consensus 675 ~~~~~~~~~~~~~~~ld~~~--~~~p~-~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le~l~ 735 (824)
.|....+..+.+.+++|+.. ..++. .....+..++.+|++.+|.+||+| .+|+++|+.+.
T Consensus 291 ~w~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m-~~Vv~~L~~~~ 353 (361)
T KOG1187|consen 291 EWAKPLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTM-SQVVKELEGIL 353 (361)
T ss_pred HHHHHHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCH-HHHHHHHHhhc
Confidence 34445666778999999975 45554 577789999999999999999999 55677775543
No 2
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-45 Score=403.66 Aligned_cols=255 Identities=35% Similarity=0.550 Sum_probs=211.5
Q ss_pred CCccceeeecCceEEEEEEECCeE-EEEEEecCCCCCC--chhHHHHHHHHHhcCCCceeeEecccCC---ceEEEEEec
Q 003384 466 FDPSLKIGEGGYGSIYKGLLRHMQ-VAIKMLHPHSLQG--PSEFQQEIDILSKIRHPNLVTLVGACPE---VWTLVYEYL 539 (824)
Q Consensus 466 f~~~~~LG~G~fG~Vykg~~~~~~-VAvK~l~~~~~~~--~~~f~~Ei~iL~~l~HpnIv~L~g~~~~---~~~LV~Ey~ 539 (824)
+.....||.|+||+||+|.+++.. ||||++....... .+.|.+|+.+|.+++|||||+++|+|.+ ..+|||||+
T Consensus 43 l~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~ 122 (362)
T KOG0192|consen 43 LPIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYM 122 (362)
T ss_pred hhhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeC
Confidence 344556999999999999999988 9999998754333 3489999999999999999999999955 378999999
Q ss_pred CCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCc-eEeccccCCcEEecCCC-cceeecccccccccccc
Q 003384 540 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS-IVHGDLKPANILLDANF-VSKLSDFGISRFLSQNE 617 (824)
Q Consensus 540 ~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~g-iiHrDLKp~NILld~~~-~vKL~DFGla~~~~~~~ 617 (824)
++|+|.++|+.. ....+++..++.|+.+||+|+.|||+ ++ ||||||||+||||+.++ ++||+|||+++......
T Consensus 123 ~~GsL~~~l~~~-~~~~l~~~~~l~~aldiArGm~YLH~---~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~ 198 (362)
T KOG0192|consen 123 PGGSLSVLLHKK-RKRKLPLKVRLRIALDIARGMEYLHS---EGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK 198 (362)
T ss_pred CCCcHHHHHhhc-ccCCCCHHHHHHHHHHHHHHHHHHhc---CCCeeecccChhhEEEcCCCCEEEECCCccceeecccc
Confidence 999999999754 45679999999999999999999999 55 99999999999999998 99999999998765432
Q ss_pred ccCCCccccccCCCCCCcccCChhhhc--cCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCC
Q 003384 618 ISSNNTTLCCRTDPKGTFAYMDPEFLA--SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAG 695 (824)
Q Consensus 618 ~~~~~~~~~~~~~~~GT~~Y~APE~l~--~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~ 695 (824)
. ..+...||+.|||||++. ...|+.|+|||||||+||||+||+.||........+.... .. ....
T Consensus 199 ~--------~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~--~~---~~Rp 265 (362)
T KOG0192|consen 199 T--------SMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVV--VG---GLRP 265 (362)
T ss_pred c--------cccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHH--hc---CCCC
Confidence 1 113467999999999999 5689999999999999999999999998766533222211 11 1222
Q ss_pred CCChhhHHHHHHHHHHHhhhccCCCCChHHHHHHHHHHHHhhC
Q 003384 696 DWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRASC 738 (824)
Q Consensus 696 ~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le~l~~~~ 738 (824)
..|...+..+..|+.+||+.+|..||++ .+++..|+.+....
T Consensus 266 ~~p~~~~~~l~~l~~~CW~~dp~~RP~f-~ei~~~l~~~~~~~ 307 (362)
T KOG0192|consen 266 PIPKECPPHLSSLMERCWLVDPSRRPSF-LEIVSRLESIMSHI 307 (362)
T ss_pred CCCccCCHHHHHHHHHhCCCCCCcCCCH-HHHHHHHHHHHHhh
Confidence 3344477899999999999999999999 77888998887643
No 3
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=3.2e-42 Score=378.62 Aligned_cols=249 Identities=24% Similarity=0.312 Sum_probs=200.4
Q ss_pred CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCC---chhHHHHHHHHHhcCCCceeeEecccC--CceEEEE
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG---PSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVY 536 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~---~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~ 536 (824)
++|+.++.||+|+||.||.+.-+ |..+|+|++++..... ...+..|.+||...++|+||+||.+|. +.+||||
T Consensus 141 ~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYLiM 220 (550)
T KOG0605|consen 141 DDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYLIM 220 (550)
T ss_pred ccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEEEE
Confidence 47899999999999999999754 6889999998865433 456889999999999999999999995 4799999
Q ss_pred EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccc
Q 003384 537 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQN 616 (824)
Q Consensus 537 Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~ 616 (824)
||++||++..+|. +...|+......++.+++.|+..||+ .|+|||||||+|+|||..|++||+|||||..+...
T Consensus 221 EylPGGD~mTLL~---~~~~L~e~~arfYiaE~vlAI~~iH~---~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~ 294 (550)
T KOG0605|consen 221 EYLPGGDMMTLLM---RKDTLTEDWARFYIAETVLAIESIHQ---LGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKK 294 (550)
T ss_pred EecCCccHHHHHH---hcCcCchHHHHHHHHHHHHHHHHHHH---cCcccccCChhheeecCCCCEeeccccccchhhhh
Confidence 9999999999995 45679999999999999999999999 89999999999999999999999999999754321
Q ss_pred cccC---------------CCccc------------------------cccCCCCCCcccCChhhhccCCCCcchhHHhH
Q 003384 617 EISS---------------NNTTL------------------------CCRTDPKGTFAYMDPEFLASGELTPKSDVYSF 657 (824)
Q Consensus 617 ~~~~---------------~~~~~------------------------~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSl 657 (824)
.... ..... ......+|||.|||||++.+.+|+..+|+|||
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSL 374 (550)
T KOG0605|consen 295 HRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSL 374 (550)
T ss_pred hhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHH
Confidence 1100 00000 01124589999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCCCCChhhHHHHHHHHHHHhhhccCCCCC
Q 003384 658 GIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPE 722 (824)
Q Consensus 658 GvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt 722 (824)
|||+||||.|.|||.........-..-.+...+.... ....+.+..+||.+|+. +|.+|-.
T Consensus 375 G~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~---~~~~s~eA~DLI~rll~-d~~~RLG 435 (550)
T KOG0605|consen 375 GCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPE---EVDLSDEAKDLITRLLC-DPENRLG 435 (550)
T ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCC---cCcccHHHHHHHHHHhc-CHHHhcC
Confidence 9999999999999987765444333322322221111 12234789999999999 9999987
No 4
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-43 Score=375.80 Aligned_cols=244 Identities=32% Similarity=0.499 Sum_probs=197.4
Q ss_pred cCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC--CCchhHHHHHHHHHhcCCCceeeEeccc--CCceEEEE
Q 003384 463 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVY 536 (824)
Q Consensus 463 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~--~~~~~f~~Ei~iL~~l~HpnIv~L~g~~--~~~~~LV~ 536 (824)
..+|.....||.|+||+||+|+++ +..||||.+..... ...+-+..|+.||+.++|||||.|++++ .+..+|||
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVM 88 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVM 88 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEE
Confidence 346888889999999999999886 57899999877632 2345578999999999999999999998 56789999
Q ss_pred EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCC------Ccceeeccccc
Q 003384 537 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDAN------FVSKLSDFGIS 610 (824)
Q Consensus 537 Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~------~~vKL~DFGla 610 (824)
|||.||+|.++|..+ +.+++.+...++.|||.||++||. ++||||||||+||||+.+ -.+||+|||+|
T Consensus 89 EyC~gGDLs~yi~~~---~~l~e~t~r~Fm~QLA~alq~L~~---~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfA 162 (429)
T KOG0595|consen 89 EYCNGGDLSDYIRRR---GRLPEATARHFMQQLASALQFLHE---NNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFA 162 (429)
T ss_pred EeCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCCcceEEeccCCCCCCCceEEecccchh
Confidence 999999999999543 468999999999999999999999 899999999999999764 46899999999
Q ss_pred cccccccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhcccccc
Q 003384 611 RFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLL 690 (824)
Q Consensus 611 ~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~l 690 (824)
+.+...... .+..|++.|||||++..++|+.|+|+||+|+|||+|++|++||+.....+.......-...+
T Consensus 163 R~L~~~~~a---------~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~~~ 233 (429)
T KOG0595|consen 163 RFLQPGSMA---------ETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGNEIV 233 (429)
T ss_pred hhCCchhHH---------HHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcccccc
Confidence 988754321 34569999999999999999999999999999999999999998655444333222222221
Q ss_pred CCCCCCCChhhHHHHHHHHHHHhhhccCCCCChHH
Q 003384 691 DPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 691 d~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
...+......+.+|+...+..++.+|-++..
T Consensus 234 ----~~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~ 264 (429)
T KOG0595|consen 234 ----PVLPAELSNPLRELLISLLQRNPKDRISFED 264 (429)
T ss_pred ----CchhhhccCchhhhhhHHHhcCccccCchHH
Confidence 1122333445667888888888888887743
No 5
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=8.2e-43 Score=370.13 Aligned_cols=238 Identities=26% Similarity=0.377 Sum_probs=198.0
Q ss_pred CCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC-CCchhHHHHHHHHHhcCCCceeeEecccC--C-ceEEEEEec
Q 003384 466 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGACP--E-VWTLVYEYL 539 (824)
Q Consensus 466 f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~-~~~LV~Ey~ 539 (824)
.+....||+|..|+|||+.++ +.-+|+|++..... ...+++.+|++|++.++|||||.+||+|. . ..+|+||||
T Consensus 81 le~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEYM 160 (364)
T KOG0581|consen 81 LERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEYM 160 (364)
T ss_pred hhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhhc
Confidence 345567999999999999987 57899999954432 23467899999999999999999999983 3 388999999
Q ss_pred CCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccccccc
Q 003384 540 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEIS 619 (824)
Q Consensus 540 ~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~ 619 (824)
++|||++++. ..+.+++....+|+.++++||.|||.. ++||||||||+|||++..|.+||||||.++.+....
T Consensus 161 DgGSLd~~~k---~~g~i~E~~L~~ia~~VL~GL~YLh~~--~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS~-- 233 (364)
T KOG0581|consen 161 DGGSLDDILK---RVGRIPEPVLGKIARAVLRGLSYLHEE--RKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNSI-- 233 (364)
T ss_pred CCCCHHHHHh---hcCCCCHHHHHHHHHHHHHHHHHHhhc--cCeeeccCCHHHeeeccCCCEEeccccccHHhhhhh--
Confidence 9999999994 336699999999999999999999963 579999999999999999999999999998765441
Q ss_pred CCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCc-----hHHHHHHhhhccccccCCCC
Q 003384 620 SNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGIT-----KEVQYALDTGKLKNLLDPLA 694 (824)
Q Consensus 620 ~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~-----~~~~~~~~~~~~~~~ld~~~ 694 (824)
..+.+||..|||||.+.+..|+.++||||||+.++||.+|+-||... .++.. +..+++...
T Consensus 234 --------a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~L------l~~Iv~~pp 299 (364)
T KOG0581|consen 234 --------ANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFEL------LCAIVDEPP 299 (364)
T ss_pred --------cccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHH------HHHHhcCCC
Confidence 15568999999999999999999999999999999999999998653 22211 122333233
Q ss_pred CCCChh-hHHHHHHHHHHHhhhccCCCCChH
Q 003384 695 GDWPFV-QAEQLANLAMRCCEMSRKSRPELG 724 (824)
Q Consensus 695 ~~~p~~-~~~~l~~Li~~Cl~~~P~~RPt~~ 724 (824)
+..|.. .+++++.|+..||+++|.+||+..
T Consensus 300 P~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~ 330 (364)
T KOG0581|consen 300 PRLPEGEFSPEFRSFVSCCLRKDPSERPSAK 330 (364)
T ss_pred CCCCcccCCHHHHHHHHHHhcCCcccCCCHH
Confidence 344554 788999999999999999999983
No 6
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2e-42 Score=385.66 Aligned_cols=243 Identities=26% Similarity=0.400 Sum_probs=206.4
Q ss_pred CCCCccceeeecCceEEEEEEE--CCeEEEEEEecCCCCC---CchhHHHHHHHHHhcCCCceeeEecccCC--ceEEEE
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLL--RHMQVAIKMLHPHSLQ---GPSEFQQEIDILSKIRHPNLVTLVGACPE--VWTLVY 536 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~--~~~~VAvK~l~~~~~~---~~~~f~~Ei~iL~~l~HpnIv~L~g~~~~--~~~LV~ 536 (824)
..|...+.||+|||+.||.++. .|..||+|++...... ..+.+.+||+|.+.|+|||||+++++|++ +.|||.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 5699999999999999999987 4689999999774333 35678999999999999999999999965 689999
Q ss_pred EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccc
Q 003384 537 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQN 616 (824)
Q Consensus 537 Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~ 616 (824)
|+|..++|..++. ...++++..+..+..||+.||.|||+ ++|||||||..|+||+++.++||+|||||..+...
T Consensus 98 ELC~~~sL~el~K---rrk~ltEpEary~l~QIv~GlkYLH~---~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~ 171 (592)
T KOG0575|consen 98 ELCHRGSLMELLK---RRKPLTEPEARYFLRQIVEGLKYLHS---LGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYD 171 (592)
T ss_pred EecCCccHHHHHH---hcCCCCcHHHHHHHHHHHHHHHHHHh---cCceecccchhheeecCcCcEEecccceeeeecCc
Confidence 9999999999994 56789999999999999999999999 89999999999999999999999999999988755
Q ss_pred cccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCCC
Q 003384 617 EISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGD 696 (824)
Q Consensus 617 ~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~ 696 (824)
+. .. .+..|||.|+|||++...+++..+||||+|||||.||+|+|||.... +...+..-+..+ ..
T Consensus 172 ~E--rk------~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~-vkety~~Ik~~~------Y~ 236 (592)
T KOG0575|consen 172 GE--RK------KTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKT-VKETYNKIKLNE------YS 236 (592)
T ss_pred cc--cc------ceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccch-HHHHHHHHHhcC------cc
Confidence 32 12 34459999999999999999999999999999999999999997543 222222222222 22
Q ss_pred CChhhHHHHHHHHHHHhhhccCCCCChHHHH
Q 003384 697 WPFVQAEQLANLAMRCCEMSRKSRPELGKDV 727 (824)
Q Consensus 697 ~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v 727 (824)
.|...+....+||.++|+.+|.+||++.+++
T Consensus 237 ~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL 267 (592)
T KOG0575|consen 237 MPSHLSAEAKDLIRKLLRPNPSERPSLDEVL 267 (592)
T ss_pred cccccCHHHHHHHHHHhcCCcccCCCHHHHh
Confidence 4556778999999999999999999995444
No 7
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-42 Score=382.34 Aligned_cols=251 Identities=30% Similarity=0.520 Sum_probs=212.6
Q ss_pred CCCccceeeecCceEEEEEEECCe-EEEEEEecCCCCCCchhHHHHHHHHHhcCCCceeeEecccCC--ceEEEEEecCC
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLRHM-QVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPE--VWTLVYEYLPN 541 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~~~-~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~~--~~~LV~Ey~~g 541 (824)
.+...+.||+|-||+||.|.+++. .||+|.++... ...+.|.+|++||++|+|+|||+|+|+|.. ..|||||||+.
T Consensus 207 ~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~-m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~ 285 (468)
T KOG0197|consen 207 ELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGS-MSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPK 285 (468)
T ss_pred HHHHHHHhcCCccceEEEEEEcCCCcccceEEeccc-cChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEeccc
Confidence 345677899999999999999985 89999998764 345789999999999999999999999954 48999999999
Q ss_pred CChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccccCC
Q 003384 542 GSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSN 621 (824)
Q Consensus 542 gsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~~~ 621 (824)
|+|.++|.. ..+..+...+.+.++.|||+|++||++ +++|||||...||||+++..+||+|||||+...++.....
T Consensus 286 GsLl~yLr~-~~~~~l~~~~Ll~~a~qIaeGM~YLes---~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~ 361 (468)
T KOG0197|consen 286 GSLLDYLRT-REGGLLNLPQLLDFAAQIAEGMAYLES---KNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTAS 361 (468)
T ss_pred CcHHHHhhh-cCCCccchHHHHHHHHHHHHHHHHHHh---CCccchhhhhhheeeccCceEEEcccccccccCCCceeec
Confidence 999999965 345678999999999999999999999 8999999999999999999999999999996655543322
Q ss_pred CccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHh-CCCCCCCchHHH--HHHhhhccccccCCCCCCCC
Q 003384 622 NTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQ--YALDTGKLKNLLDPLAGDWP 698 (824)
Q Consensus 622 ~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELlt-G~~Pf~~~~~~~--~~~~~~~~~~~ld~~~~~~p 698 (824)
....-..-|.|||.+..+.++.+||||||||+||||+| |+.|++.....+ ..+..| ..-+.|
T Consensus 362 -------~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~G--------yRlp~P 426 (468)
T KOG0197|consen 362 -------EGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERG--------YRLPRP 426 (468)
T ss_pred -------CCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhcc--------CcCCCC
Confidence 22335678999999999999999999999999999999 999987654432 333333 223457
Q ss_pred hhhHHHHHHHHHHHhhhccCCCCChHHHHHHHHHHHHh
Q 003384 699 FVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRA 736 (824)
Q Consensus 699 ~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le~l~~ 736 (824)
..++..+.+++..||..+|++|||+ +.+...|+.+..
T Consensus 427 ~~CP~~vY~lM~~CW~~~P~~RPtF-~~L~~~l~~~~~ 463 (468)
T KOG0197|consen 427 EGCPDEVYELMKSCWHEDPEDRPTF-ETLREVLEDFFT 463 (468)
T ss_pred CCCCHHHHHHHHHHhhCCcccCCCH-HHHHHHHHHhhh
Confidence 7889999999999999999999999 677777777644
No 8
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.6e-43 Score=359.29 Aligned_cols=252 Identities=28% Similarity=0.423 Sum_probs=206.1
Q ss_pred CCCccceeeecCceEEEEEEE--CCeEEEEEEecCCCCCC--chhHHHHHHHHHhcCCCceeeEec-ccC---CceEEEE
Q 003384 465 NFDPSLKIGEGGYGSIYKGLL--RHMQVAIKMLHPHSLQG--PSEFQQEIDILSKIRHPNLVTLVG-ACP---EVWTLVY 536 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~--~~~~VAvK~l~~~~~~~--~~~f~~Ei~iL~~l~HpnIv~L~g-~~~---~~~~LV~ 536 (824)
+|.+.++||+|.||+|||+.. .+..||.|.++-..... ...+..|+.+|++|+|||||++++ .+. +..+|||
T Consensus 20 ~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivm 99 (375)
T KOG0591|consen 20 DYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVM 99 (375)
T ss_pred HHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHH
Confidence 578889999999999999975 47889999987443322 345889999999999999999999 452 2478999
Q ss_pred EecCCCChhhhhhcc-CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCC-ceEeccccCCcEEecCCCcceeeccccccccc
Q 003384 537 EYLPNGSLEDRLSCK-DNSPPLSWQTRIRIATELCSVLIFLHSCKPH-SIVHGDLKPANILLDANFVSKLSDFGISRFLS 614 (824)
Q Consensus 537 Ey~~ggsL~~~L~~~-~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~-giiHrDLKp~NILld~~~~vKL~DFGla~~~~ 614 (824)
|||.+|+|..++... .....+++.++++++.|++.||+.+|+.-++ -|+||||||.||+|+.+|.+||+||||++++.
T Consensus 100 E~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~ 179 (375)
T KOG0591|consen 100 ELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLS 179 (375)
T ss_pred HhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHhc
Confidence 999999999998653 4456799999999999999999999994433 38999999999999999999999999999887
Q ss_pred cccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHH--HhhhccccccCC
Q 003384 615 QNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYA--LDTGKLKNLLDP 692 (824)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~--~~~~~~~~~ld~ 692 (824)
...... .+.+|||.||+||.+...+|+.+|||||+||++|||+.-++||.+.+..... +..|..
T Consensus 180 s~~tfA--------~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qgd~------ 245 (375)
T KOG0591|consen 180 SKTTFA--------HSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQGDY------ 245 (375)
T ss_pred chhHHH--------HhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcCCC------
Confidence 553321 4567999999999999999999999999999999999999999887543322 222211
Q ss_pred CCCCCC-hhhHHHHHHHHHHHhhhccCCCCChHHHHHHHHH
Q 003384 693 LAGDWP-FVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLE 732 (824)
Q Consensus 693 ~~~~~p-~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le 732 (824)
.+.| ...+.++..|+..|+..||..||+....|.++..
T Consensus 246 --~~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~~ 284 (375)
T KOG0591|consen 246 --PPLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQS 284 (375)
T ss_pred --CCCcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHHH
Confidence 1223 6778999999999999999999986444444433
No 9
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-42 Score=365.93 Aligned_cols=237 Identities=29% Similarity=0.379 Sum_probs=199.2
Q ss_pred cCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCC---CchhHHHHHHHHHhcCCCceeeEecccC--CceEEE
Q 003384 463 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ---GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLV 535 (824)
Q Consensus 463 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~---~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV 535 (824)
..+|++.++||+|+||+||.++.+ ++-+|+|++++.... ..+....|..||..++||.||+|+..|+ +..|||
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylV 103 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLV 103 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEE
Confidence 457999999999999999998765 578999999875332 3456889999999999999999999995 479999
Q ss_pred EEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccc
Q 003384 536 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQ 615 (824)
Q Consensus 536 ~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~ 615 (824)
+||+.||.|..+|. +...+++....-++.+|+.||.|||+ +|||||||||+|||||..|+++|+|||||+....
T Consensus 104 ld~~~GGeLf~hL~---~eg~F~E~~arfYlaEi~lAL~~LH~---~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~ 177 (357)
T KOG0598|consen 104 LDYLNGGELFYHLQ---REGRFSEDRARFYLAEIVLALGYLHS---KGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLK 177 (357)
T ss_pred EeccCCccHHHHHH---hcCCcchhHHHHHHHHHHHHHHHHHh---CCeeeccCCHHHeeecCCCcEEEeccccchhccc
Confidence 99999999999994 45668999999999999999999999 8999999999999999999999999999985443
Q ss_pred ccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHH--HHHhhhccccccCCC
Q 003384 616 NEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQ--YALDTGKLKNLLDPL 693 (824)
Q Consensus 616 ~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~--~~~~~~~~~~~ld~~ 693 (824)
.+.. . .+.+||+.|||||++.+.+|+..+|||||||++|||++|.|||...+... ..+..++
T Consensus 178 ~~~~--t------~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k-------- 241 (357)
T KOG0598|consen 178 DGDA--T------RTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGK-------- 241 (357)
T ss_pred CCCc--c------ccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCc--------
Confidence 3211 1 23579999999999999999999999999999999999999997665332 2222222
Q ss_pred CCCCChhhHHHHHHHHHHHhhhccCCCC
Q 003384 694 AGDWPFVQAEQLANLAMRCCEMSRKSRP 721 (824)
Q Consensus 694 ~~~~p~~~~~~l~~Li~~Cl~~~P~~RP 721 (824)
....|...+....+++...+..+|++|-
T Consensus 242 ~~~~p~~ls~~ardll~~LL~rdp~~RL 269 (357)
T KOG0598|consen 242 LPLPPGYLSEEARDLLKKLLKRDPRQRL 269 (357)
T ss_pred CCCCCccCCHHHHHHHHHHhccCHHHhc
Confidence 1223444677899999999999999995
No 10
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.3e-42 Score=370.34 Aligned_cols=241 Identities=27% Similarity=0.427 Sum_probs=193.2
Q ss_pred CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCC-------chhHHHHHHHHHhcCCCceeeEeccc--CCceE
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG-------PSEFQQEIDILSKIRHPNLVTLVGAC--PEVWT 533 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~-------~~~f~~Ei~iL~~l~HpnIv~L~g~~--~~~~~ 533 (824)
.|-..+.||+|+||.|-+|..+ ++.||||+++...... ...+.+|++||++|+|||||+++++| ++..|
T Consensus 173 ~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds~Y 252 (475)
T KOG0615|consen 173 YYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDSSY 252 (475)
T ss_pred eeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCceE
Confidence 4777889999999999999775 5899999998753222 12357999999999999999999999 45679
Q ss_pred EEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCC---Ccceeeccccc
Q 003384 534 LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDAN---FVSKLSDFGIS 610 (824)
Q Consensus 534 LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~---~~vKL~DFGla 610 (824)
+||||+.||+|.+.+... +.+.+..-..++.|++.||.|||+ +||+||||||+|||+..+ ..+||+|||+|
T Consensus 253 mVlE~v~GGeLfd~vv~n---k~l~ed~~K~~f~Qll~avkYLH~---~GI~HRDiKPeNILl~~~~e~~llKItDFGlA 326 (475)
T KOG0615|consen 253 MVLEYVEGGELFDKVVAN---KYLREDLGKLLFKQLLTAVKYLHS---QGIIHRDIKPENILLSNDAEDCLLKITDFGLA 326 (475)
T ss_pred EEEEEecCccHHHHHHhc---cccccchhHHHHHHHHHHHHHHHH---cCcccccCCcceEEeccCCcceEEEecccchh
Confidence 999999999999999533 446667778899999999999999 999999999999999765 78999999999
Q ss_pred cccccccccCCCccccccCCCCCCcccCChhhhccCC---CCcchhHHhHHHHHHHHHhCCCCCCCchH---HHHHHhhh
Q 003384 611 RFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGE---LTPKSDVYSFGIILLRLLTGRPALGITKE---VQYALDTG 684 (824)
Q Consensus 611 ~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~---~t~ksDVwSlGvvL~ELltG~~Pf~~~~~---~~~~~~~~ 684 (824)
+....... . .+..||+.|.|||++.+.+ +..++|+||+|||||-+++|.|||..... ....+..|
T Consensus 327 K~~g~~sf---m------~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G 397 (475)
T KOG0615|consen 327 KVSGEGSF---M------KTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKG 397 (475)
T ss_pred hcccccee---h------hhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcC
Confidence 98764321 2 3456999999999998764 33488999999999999999999964322 22333333
Q ss_pred ccccccCCCCCCCChhhHHHHHHHHHHHhhhccCCCCChHH
Q 003384 685 KLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 685 ~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
++.. .+......+++..+||.++|..||++||+..+
T Consensus 398 ~y~f-----~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~e 433 (475)
T KOG0615|consen 398 RYAF-----GPLQWDRISEEALDLINWMLVVDPENRPSADE 433 (475)
T ss_pred cccc-----cChhhhhhhHHHHHHHHHhhEeCcccCcCHHH
Confidence 3321 11122346778999999999999999999843
No 11
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-40 Score=362.79 Aligned_cols=250 Identities=28% Similarity=0.410 Sum_probs=206.5
Q ss_pred CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCC---CCCchhHHHHHHHHHhc-CCCceeeEecccCC--ceEEE
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS---LQGPSEFQQEIDILSKI-RHPNLVTLVGACPE--VWTLV 535 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~---~~~~~~f~~Ei~iL~~l-~HpnIv~L~g~~~~--~~~LV 535 (824)
.+|..++.||.|+|++||+|+.. ++.||||++.+.- ....+-+..|-++|.+| .||.|++||..|.+ .+|+|
T Consensus 73 ~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYFv 152 (604)
T KOG0592|consen 73 NDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYFV 152 (604)
T ss_pred hhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEEE
Confidence 35777788999999999999875 5889999987542 22234577899999999 89999999999955 68999
Q ss_pred EEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccc
Q 003384 536 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQ 615 (824)
Q Consensus 536 ~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~ 615 (824)
+||+++|+|.++|.+ .+.|++.....++.+|+.||.|||+ +|||||||||+|||||.+|++||+|||.|+.+..
T Consensus 153 Le~A~nGdll~~i~K---~Gsfde~caR~YAAeIldAleylH~---~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~ 226 (604)
T KOG0592|consen 153 LEYAPNGDLLDLIKK---YGSFDETCARFYAAEILDALEYLHS---NGIIHRDLKPENILLDKDGHIKITDFGSAKILSP 226 (604)
T ss_pred EEecCCCcHHHHHHH---hCcchHHHHHHHHHHHHHHHHHHHh---cCceeccCChhheeEcCCCcEEEeeccccccCCh
Confidence 999999999999953 3568888899999999999999999 8999999999999999999999999999998876
Q ss_pred cccc-----CCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhcccccc
Q 003384 616 NEIS-----SNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLL 690 (824)
Q Consensus 616 ~~~~-----~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~l 690 (824)
.... ........+...+||..|.+||+|..+..++.+|+|+||||||+|+.|+|||...++....-....
T Consensus 227 ~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~----- 301 (604)
T KOG0592|consen 227 SQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQA----- 301 (604)
T ss_pred hhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHH-----
Confidence 5443 111111223568999999999999999999999999999999999999999987776443222221
Q ss_pred CCCCCCCChhhHHHHHHHHHHHhhhccCCCCChHHHH
Q 003384 691 DPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDV 727 (824)
Q Consensus 691 d~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v 727 (824)
+...||..-++.+.+|+.+.|..+|.+|++. +.+
T Consensus 302 --l~y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~-~qI 335 (604)
T KOG0592|consen 302 --LDYEFPEGFPEDARDLIKKLLVRDPSDRLTS-QQI 335 (604)
T ss_pred --hcccCCCCCCHHHHHHHHHHHccCccccccH-HHH
Confidence 2234556666899999999999999999998 444
No 12
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=8e-40 Score=352.28 Aligned_cols=247 Identities=30% Similarity=0.492 Sum_probs=199.3
Q ss_pred CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCCchhHHHHHHHHHhcCCCceeeEeccc--CC--ceEEEEE
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PE--VWTLVYE 537 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~--~~--~~~LV~E 537 (824)
.++...+.||+|+||.||++... +...|||.+........+.+.+|+.+|++|+|||||+++|.. .+ .++++||
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mE 96 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFME 96 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeee
Confidence 35677888999999999999886 488999988765322245689999999999999999999963 34 4889999
Q ss_pred ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecC-CCcceeeccccccccccc
Q 003384 538 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDA-NFVSKLSDFGISRFLSQN 616 (824)
Q Consensus 538 y~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~-~~~vKL~DFGla~~~~~~ 616 (824)
|+++|+|.+++..... .|++..+.+++.||++||.|||+ +|||||||||+||||+. +|.+||+|||+++.....
T Consensus 97 y~~~GsL~~~~~~~g~--~l~E~~v~~ytr~iL~GL~ylHs---~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~ 171 (313)
T KOG0198|consen 97 YAPGGSLSDLIKRYGG--KLPEPLVRRYTRQILEGLAYLHS---KGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESK 171 (313)
T ss_pred ccCCCcHHHHHHHcCC--CCCHHHHHHHHHHHHHHHHHHHh---CCEeccCcccceEEEeCCCCeEEeccCccccccccc
Confidence 9999999999964432 69999999999999999999998 89999999999999999 799999999999866531
Q ss_pred cccCCCccccccCCCCCCcccCChhhhccCC-CCcchhHHhHHHHHHHHHhCCCCCCC-chHHHHHHhhhccccccCCCC
Q 003384 617 EISSNNTTLCCRTDPKGTFAYMDPEFLASGE-LTPKSDVYSFGIILLRLLTGRPALGI-TKEVQYALDTGKLKNLLDPLA 694 (824)
Q Consensus 617 ~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~t~ksDVwSlGvvL~ELltG~~Pf~~-~~~~~~~~~~~~~~~~ld~~~ 694 (824)
... ........||+.|||||++..+. ..+++|||||||++.||+||.+||.. ..........+.-. ..
T Consensus 172 ~~~-----~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~~-----~~ 241 (313)
T KOG0198|consen 172 GTK-----SDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGRED-----SL 241 (313)
T ss_pred ccc-----ccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhccC-----CC
Confidence 111 01123467999999999998643 34599999999999999999999976 23333333333222 22
Q ss_pred CCCChhhHHHHHHHHHHHhhhccCCCCChHH
Q 003384 695 GDWPFVQAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 695 ~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
+.+|...+....+++.+|+..+|..|||+.+
T Consensus 242 P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~e 272 (313)
T KOG0198|consen 242 PEIPDSLSDEAKDFLRKCFKRDPEKRPTAEE 272 (313)
T ss_pred CCCCcccCHHHHHHHHHHhhcCcccCcCHHH
Confidence 3567778889999999999999999999943
No 13
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=2.7e-39 Score=357.00 Aligned_cols=255 Identities=25% Similarity=0.405 Sum_probs=201.3
Q ss_pred cCCCCccceeeecCceEEEEEEEC-------CeEEEEEEecCCCCC-CchhHHHHHHHHHhc-CCCceeeEecccCC---
Q 003384 463 THNFDPSLKIGEGGYGSIYKGLLR-------HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKI-RHPNLVTLVGACPE--- 530 (824)
Q Consensus 463 ~~~f~~~~~LG~G~fG~Vykg~~~-------~~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l-~HpnIv~L~g~~~~--- 530 (824)
.++|.+.++||+|+||.||+|.+. +..||||++...... ....+.+|+.+|..+ +||||++++|+|..
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 85 (338)
T cd05102 6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNG 85 (338)
T ss_pred hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCC
Confidence 357888999999999999999752 256999998754322 234688999999999 89999999998843
Q ss_pred ceEEEEEecCCCChhhhhhccCC---------------------------------------------------------
Q 003384 531 VWTLVYEYLPNGSLEDRLSCKDN--------------------------------------------------------- 553 (824)
Q Consensus 531 ~~~LV~Ey~~ggsL~~~L~~~~~--------------------------------------------------------- 553 (824)
..++||||+++|+|.+++.....
T Consensus 86 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (338)
T cd05102 86 PLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDD 165 (338)
T ss_pred ceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccc
Confidence 47899999999999998864211
Q ss_pred --CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccccCCCccccccCCC
Q 003384 554 --SPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDP 631 (824)
Q Consensus 554 --~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~ 631 (824)
..++++..+..++.|++.||.|||+ ++|+||||||+|||++.++.+||+|||+++......... .....
T Consensus 166 ~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~------~~~~~ 236 (338)
T cd05102 166 LWKSPLTMEDLICYSFQVARGMEFLAS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYV------RKGSA 236 (338)
T ss_pred cccCCCCHHHHHHHHHHHHHHHHHHHH---CCEECCCCccceEEEcCCCcEEEeecccccccccCcchh------cccCC
Confidence 2358888999999999999999999 899999999999999999999999999998654322111 11234
Q ss_pred CCCcccCChhhhccCCCCcchhHHhHHHHHHHHHh-CCCCCCCchH---HHHHHhhhccccccCCCCCCCChhhHHHHHH
Q 003384 632 KGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKE---VQYALDTGKLKNLLDPLAGDWPFVQAEQLAN 707 (824)
Q Consensus 632 ~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELlt-G~~Pf~~~~~---~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~ 707 (824)
.+++.|+|||++.+..++.++|||||||+||||++ |.+||..... ....+..+. ....+...+..+.+
T Consensus 237 ~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~l~~ 308 (338)
T cd05102 237 RLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGT--------RMRAPENATPEIYR 308 (338)
T ss_pred CCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCC--------CCCCCCCCCHHHHH
Confidence 56789999999999999999999999999999997 9999975432 111111111 11123445678999
Q ss_pred HHHHHhhhccCCCCChHHHHHHHHHHHH
Q 003384 708 LAMRCCEMSRKSRPELGKDVWRVLEPMR 735 (824)
Q Consensus 708 Li~~Cl~~~P~~RPt~~~~v~~~Le~l~ 735 (824)
|+.+||+.+|.+||++ .++++.|+.+.
T Consensus 309 li~~cl~~dp~~RPs~-~el~~~l~~~~ 335 (338)
T cd05102 309 IMLACWQGDPKERPTF-SALVEILGDLL 335 (338)
T ss_pred HHHHHccCChhhCcCH-HHHHHHHHHHH
Confidence 9999999999999999 77888888754
No 14
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=8.1e-39 Score=345.23 Aligned_cols=243 Identities=22% Similarity=0.346 Sum_probs=198.7
Q ss_pred cceeeecCceEEEEEEECCeEEEEEEecCCCCCC---chhHHHHHHHHHhcCCCceeeEecccCC------ceEEEEEec
Q 003384 469 SLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQG---PSEFQQEIDILSKIRHPNLVTLVGACPE------VWTLVYEYL 539 (824)
Q Consensus 469 ~~~LG~G~fG~Vykg~~~~~~VAvK~l~~~~~~~---~~~f~~Ei~iL~~l~HpnIv~L~g~~~~------~~~LV~Ey~ 539 (824)
...||+|++|.||+|.+.+..||||++....... .+.|.+|+.+|++++||||++++|++.+ ..++||||+
T Consensus 25 ~~~i~~g~~~~v~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~ 104 (283)
T PHA02988 25 SVLIKENDQNSIYKGIFNNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYC 104 (283)
T ss_pred CeEEeeCCceEEEEEEECCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeC
Confidence 3679999999999999999999999997654333 3567899999999999999999998743 468999999
Q ss_pred CCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccccccc
Q 003384 540 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEIS 619 (824)
Q Consensus 540 ~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~ 619 (824)
++|+|.+++.. ...+++.....++.+++.||.|||.. .+++||||||+|||++.++.+||+|||+++.+....
T Consensus 105 ~~g~L~~~l~~---~~~~~~~~~~~i~~~i~~~l~~lH~~--~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~-- 177 (283)
T PHA02988 105 TRGYLREVLDK---EKDLSFKTKLDMAIDCCKGLYNLYKY--TNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPP-- 177 (283)
T ss_pred CCCcHHHHHhh---CCCCChhHHHHHHHHHHHHHHHHHhc--CCCCCCcCChhhEEECCCCcEEEcccchHhhhcccc--
Confidence 99999999953 34688999999999999999999973 268899999999999999999999999988654321
Q ss_pred CCCccccccCCCCCCcccCChhhhcc--CCCCcchhHHhHHHHHHHHHhCCCCCCCchHHH--HHHhhhccccccCCCCC
Q 003384 620 SNNTTLCCRTDPKGTFAYMDPEFLAS--GELTPKSDVYSFGIILLRLLTGRPALGITKEVQ--YALDTGKLKNLLDPLAG 695 (824)
Q Consensus 620 ~~~~~~~~~~~~~GT~~Y~APE~l~~--~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~--~~~~~~~~~~~ld~~~~ 695 (824)
....||..|+|||++.+ ..++.++|||||||++|||+||+.||....... ..+..+. ...
T Consensus 178 ---------~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~-------~~~ 241 (283)
T PHA02988 178 ---------FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKN-------NSL 241 (283)
T ss_pred ---------ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcC-------CCC
Confidence 12358999999999976 689999999999999999999999997654322 1111111 111
Q ss_pred CCChhhHHHHHHHHHHHhhhccCCCCChHHHHHHHHHHHH
Q 003384 696 DWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMR 735 (824)
Q Consensus 696 ~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le~l~ 735 (824)
..|...+..+.+|+.+||+.+|.+||++ ++++..|+.+.
T Consensus 242 ~~~~~~~~~l~~li~~cl~~dp~~Rps~-~ell~~l~~~~ 280 (283)
T PHA02988 242 KLPLDCPLEIKCIVEACTSHDSIKRPNI-KEILYNLSLYK 280 (283)
T ss_pred CCCCcCcHHHHHHHHHHhcCCcccCcCH-HHHHHHHHHHH
Confidence 2333457789999999999999999999 77888887654
No 15
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.6e-39 Score=354.31 Aligned_cols=248 Identities=29% Similarity=0.398 Sum_probs=200.3
Q ss_pred CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC--CCchhHHHHHHHHHhcCCCceeeEecccC----CceEEEE
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVGACP----EVWTLVY 536 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~--~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~----~~~~LV~ 536 (824)
.|+.+.+||+|.||.||+|+.. +..||+|++..... ..+....+||.||++|+||||++|.+... ..+|||+
T Consensus 118 ~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlVF 197 (560)
T KOG0600|consen 118 SFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLVF 197 (560)
T ss_pred HHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEEE
Confidence 5777788999999999999875 57799999887653 33556789999999999999999999762 3689999
Q ss_pred EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccc
Q 003384 537 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQN 616 (824)
Q Consensus 537 Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~ 616 (824)
|||++ +|.-++. .....|+..++..++.|++.||.|+|. +||+|||||.+|||||++|.+||+|||||+++...
T Consensus 198 eYMdh-DL~GLl~--~p~vkft~~qIKc~mkQLl~Gl~~cH~---~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~ 271 (560)
T KOG0600|consen 198 EYMDH-DLSGLLS--SPGVKFTEPQIKCYMKQLLEGLEYCHS---RGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPS 271 (560)
T ss_pred ecccc-hhhhhhc--CCCcccChHHHHHHHHHHHHHHHHHhh---cCeeeccccccceEEcCCCCEEeccccceeeccCC
Confidence 99987 7888774 334579999999999999999999999 99999999999999999999999999999987655
Q ss_pred cccCCCccccccCCCCCCcccCChhhhccC-CCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCC
Q 003384 617 EISSNNTTLCCRTDPKGTFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAG 695 (824)
Q Consensus 617 ~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~ 695 (824)
.... .+..+-|.+|.|||.+.+. .|+.++|+||.||||.||++|+|.|.+..++.+....-++ +..|...
T Consensus 272 ~~~~-------~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfkl--cGSP~e~ 342 (560)
T KOG0600|consen 272 GSAP-------YTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKL--CGSPTED 342 (560)
T ss_pred CCcc-------cccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHH--hCCCChh
Confidence 4222 2455679999999999885 7999999999999999999999999988877654332111 1111111
Q ss_pred CCC------------------------hhhHHHHHHHHHHHhhhccCCCCChHHHH
Q 003384 696 DWP------------------------FVQAEQLANLAMRCCEMSRKSRPELGKDV 727 (824)
Q Consensus 696 ~~p------------------------~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v 727 (824)
.|+ ...+....+|+..+|..+|.+|.|+.+.+
T Consensus 343 ~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL 398 (560)
T KOG0600|consen 343 YWPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSAL 398 (560)
T ss_pred ccccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHh
Confidence 111 11234678999999999999999985444
No 16
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=8.1e-40 Score=336.43 Aligned_cols=231 Identities=26% Similarity=0.391 Sum_probs=198.2
Q ss_pred CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCC---CchhHHHHHHHHHhcCCCceeeEecccCC--ceEEEEE
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ---GPSEFQQEIDILSKIRHPNLVTLVGACPE--VWTLVYE 537 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~---~~~~f~~Ei~iL~~l~HpnIv~L~g~~~~--~~~LV~E 537 (824)
+|+..+.||.|+||.|..++.+ +..+|+|++...... ..++..+|..+|+.+.||++++|++.|.+ ..|+|||
T Consensus 45 dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvme 124 (355)
T KOG0616|consen 45 DFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVME 124 (355)
T ss_pred hhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEEe
Confidence 5888899999999999999876 578999999875433 24567899999999999999999999854 6899999
Q ss_pred ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccccc
Q 003384 538 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNE 617 (824)
Q Consensus 538 y~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~ 617 (824)
|++||.|..+|+ ...+|+......++.+|+.||.|||+ ++||+|||||+|||||.+|++||+|||+|+.+....
T Consensus 125 yv~GGElFS~Lr---k~~rF~e~~arFYAAeivlAleylH~---~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~rT 198 (355)
T KOG0616|consen 125 YVPGGELFSYLR---KSGRFSEPHARFYAAEIVLALEYLHS---LDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSGRT 198 (355)
T ss_pred ccCCccHHHHHH---hcCCCCchhHHHHHHHHHHHHHHHHh---cCeeeccCChHHeeeccCCcEEEEeccceEEecCcE
Confidence 999999999994 44579999999999999999999999 889999999999999999999999999999765431
Q ss_pred ccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHH--HHhhhccccccCCCCC
Q 003384 618 ISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQY--ALDTGKLKNLLDPLAG 695 (824)
Q Consensus 618 ~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~--~~~~~~~~~~ld~~~~ 695 (824)
.+..|||.|+|||++...+|+.++|+|||||++|||+.|.+||...+.+.. .+..+ ..
T Consensus 199 -----------~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~---------~v 258 (355)
T KOG0616|consen 199 -----------WTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEG---------KV 258 (355)
T ss_pred -----------EEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhC---------cc
Confidence 234599999999999999999999999999999999999999987765332 11122 22
Q ss_pred CCChhhHHHHHHHHHHHhhhccCCCC
Q 003384 696 DWPFVQAEQLANLAMRCCEMSRKSRP 721 (824)
Q Consensus 696 ~~p~~~~~~l~~Li~~Cl~~~P~~RP 721 (824)
.+|...+.++.+|+...++.|-..|.
T Consensus 259 ~fP~~fs~~~kdLl~~LL~vD~t~R~ 284 (355)
T KOG0616|consen 259 KFPSYFSSDAKDLLKKLLQVDLTKRF 284 (355)
T ss_pred cCCcccCHHHHHHHHHHHhhhhHhhh
Confidence 45777788999999999999998883
No 17
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=1.4e-39 Score=334.96 Aligned_cols=246 Identities=27% Similarity=0.387 Sum_probs=195.1
Q ss_pred CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCC--chhHHHHHHHHHhcCCCceeeEecccC--CceEEEEEe
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG--PSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEY 538 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~--~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~Ey 538 (824)
.|+...++|+|+||+|||.+.+ |+-||||++....... .+-..+|+.+|++|+|||+|.|+.+|. ..++||+||
T Consensus 3 kYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~ 82 (396)
T KOG0593|consen 3 KYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEY 82 (396)
T ss_pred HHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeee
Confidence 4777788999999999999876 5789999997643321 234679999999999999999999994 468999999
Q ss_pred cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccc
Q 003384 539 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEI 618 (824)
Q Consensus 539 ~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~ 618 (824)
|+..-|.++= . ....++...+..++.|++.|+.|+|+ +++|||||||+||||+.+|.+||||||+|+.+.....
T Consensus 83 ~dhTvL~eLe-~--~p~G~~~~~vk~~l~Q~l~ai~~cHk---~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd 156 (396)
T KOG0593|consen 83 CDHTVLHELE-R--YPNGVPSELVKKYLYQLLKAIHFCHK---NNCIHRDIKPENILITQNGVVKLCDFGFARTLSAPGD 156 (396)
T ss_pred cchHHHHHHH-h--ccCCCCHHHHHHHHHHHHHHhhhhhh---cCeecccCChhheEEecCCcEEeccchhhHhhcCCcc
Confidence 9886555543 2 23447888999999999999999999 8899999999999999999999999999998874321
Q ss_pred cCCCccccccCCCCCCcccCChhhhcc-CCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhc------------
Q 003384 619 SSNNTTLCCRTDPKGTFAYMDPEFLAS-GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGK------------ 685 (824)
Q Consensus 619 ~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~------------ 685 (824)
. .+..+.|.+|.|||.+.+ .+|++.+|||++||++.||++|.|.|.+...+...+....
T Consensus 157 ~--------YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~i 228 (396)
T KOG0593|consen 157 N--------YTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSI 228 (396)
T ss_pred h--------hhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHH
Confidence 1 144568999999999988 6899999999999999999999999998877665443211
Q ss_pred ------cccccCC-------CCCCCChhhHHHHHHHHHHHhhhccCCCCChHH
Q 003384 686 ------LKNLLDP-------LAGDWPFVQAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 686 ------~~~~ld~-------~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
+..+.-| +...+| ..+.-+.+|+..||..||.+|++-.+
T Consensus 229 F~~N~~F~Gv~lP~~~~~epLe~k~p-~~s~~~ld~~k~cL~~dP~~R~sc~q 280 (396)
T KOG0593|consen 229 FSSNPFFHGVRLPEPEHPEPLERKYP-KISNVLLDLLKKCLKMDPDDRLSCEQ 280 (396)
T ss_pred hccCCceeeeecCCCCCccchhhhcc-cchHHHHHHHHHHhcCCccccccHHH
Confidence 1111111 111122 22447899999999999999998743
No 18
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-39 Score=359.52 Aligned_cols=256 Identities=27% Similarity=0.474 Sum_probs=203.5
Q ss_pred CCCCccceeeecCceEEEEEEECCeEEEEEEecCCCCCC--chhHHHHHHHHHhcCCCceeeEecccC-CceEEEEEecC
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQG--PSEFQQEIDILSKIRHPNLVTLVGACP-EVWTLVYEYLP 540 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~~~~~VAvK~l~~~~~~~--~~~f~~Ei~iL~~l~HpnIv~L~g~~~-~~~~LV~Ey~~ 540 (824)
..+.+...||+|.||+||+|.|.| .||||+++...... .+.|++|+.+|++-+|-||+-+.|+|. +...||.-+|.
T Consensus 392 ~ev~l~~rIGsGsFGtV~Rg~whG-dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~AIiTqwCe 470 (678)
T KOG0193|consen 392 EEVLLGERIGSGSFGTVYRGRWHG-DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPLAIITQWCE 470 (678)
T ss_pred HHhhccceeccccccceeeccccc-ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCceeeeehhcc
Confidence 345567789999999999999976 59999998765443 457999999999999999999999994 45689999999
Q ss_pred CCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccccC
Q 003384 541 NGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISS 620 (824)
Q Consensus 541 ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~~ 620 (824)
|-+|+.+|+-.. ..|...+.+.|+.||++|+.|||. ++|||||||+.||||.++++|||+||||+..-.......
T Consensus 471 GsSLY~hlHv~e--tkfdm~~~idIAqQiaqGM~YLHA---K~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g~~ 545 (678)
T KOG0193|consen 471 GSSLYTHLHVQE--TKFDMNTTIDIAQQIAQGMDYLHA---KNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSGEQ 545 (678)
T ss_pred Cchhhhhccchh--hhhhHHHHHHHHHHHHHhhhhhhh---hhhhhhhccccceEEccCCcEEEecccceeeeeeecccc
Confidence 999999997443 568899999999999999999999 999999999999999999999999999997543321111
Q ss_pred CCccccccCCCCCCcccCChhhhccC---CCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCCCC
Q 003384 621 NNTTLCCRTDPKGTFAYMDPEFLASG---ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDW 697 (824)
Q Consensus 621 ~~~~~~~~~~~~GT~~Y~APE~l~~~---~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~ 697 (824)
. .....|...|||||++..+ +|+..+||||||||+|||+||..||.....-+.....|+-....|... .
T Consensus 546 q------~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVGrG~l~pd~s~--~ 617 (678)
T KOG0193|consen 546 Q------LEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVGRGYLMPDLSK--I 617 (678)
T ss_pred c------cCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEecccccCccchh--h
Confidence 1 1334689999999999754 689999999999999999999999985443332223333322222221 2
Q ss_pred ChhhHHHHHHHHHHHhhhccCCCCChHHHHHHHHHHH
Q 003384 698 PFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM 734 (824)
Q Consensus 698 p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le~l 734 (824)
....+.++.+|+..||..++++||.+. .|+..|+.+
T Consensus 618 ~s~~pk~mk~Ll~~C~~~~~~eRP~F~-~il~~l~~l 653 (678)
T KOG0193|consen 618 RSNCPKAMKRLLSDCWKFDREERPLFP-QLLSKLEEL 653 (678)
T ss_pred hccCHHHHHHHHHHHHhcCcccCccHH-HHHHHHHHh
Confidence 234567999999999999999999995 455545444
No 19
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=1.2e-38 Score=323.62 Aligned_cols=246 Identities=26% Similarity=0.416 Sum_probs=201.5
Q ss_pred CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCC--chhHHHHHHHHHhcCCCceeeEecccC--CceEEEEEe
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG--PSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEY 538 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~--~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~Ey 538 (824)
.|...++||+|.||.||+|.+. ++.||||+++.....+ .....+|+..|+.++||||+.|+++|+ +...||+||
T Consensus 3 rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfEf 82 (318)
T KOG0659|consen 3 RYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFEF 82 (318)
T ss_pred hhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEEe
Confidence 5677788999999999999875 6889999998754332 235789999999999999999999995 468899999
Q ss_pred cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccc
Q 003384 539 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEI 618 (824)
Q Consensus 539 ~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~ 618 (824)
++ .+|+..+. +....|+...+..++.++++||+|||. +.|+||||||.|+|++.+|.+||+|||+|+.+.....
T Consensus 83 m~-tdLe~vIk--d~~i~l~pa~iK~y~~m~LkGl~y~H~---~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~ 156 (318)
T KOG0659|consen 83 MP-TDLEVVIK--DKNIILSPADIKSYMLMTLKGLAYCHS---KWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNR 156 (318)
T ss_pred cc-ccHHHHhc--ccccccCHHHHHHHHHHHHHHHHHHHh---hhhhcccCCccceEEcCCCcEEeecccchhccCCCCc
Confidence 96 58999984 556789999999999999999999999 8999999999999999999999999999998875543
Q ss_pred cCCCccccccCCCCCCcccCChhhhccC-CCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCCCC
Q 003384 619 SSNNTTLCCRTDPKGTFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDW 697 (824)
Q Consensus 619 ~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~ 697 (824)
.. +..+-|.+|.|||.+.+. .|+..+|+||.|||+.||+-|.|.|.+..++++.... +..+..|....|
T Consensus 157 ~~--------~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~I--f~~LGTP~~~~W 226 (318)
T KOG0659|consen 157 IQ--------THQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKI--FRALGTPTPDQW 226 (318)
T ss_pred cc--------ccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHH--HHHcCCCCcccC
Confidence 22 223579999999998875 7999999999999999999999999888776654322 111222222222
Q ss_pred C-----------------------hhhHHHHHHHHHHHhhhccCCCCChHHH
Q 003384 698 P-----------------------FVQAEQLANLAMRCCEMSRKSRPELGKD 726 (824)
Q Consensus 698 p-----------------------~~~~~~l~~Li~~Cl~~~P~~RPt~~~~ 726 (824)
| ...+.++.+|+..++..||.+|++..+.
T Consensus 227 P~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qa 278 (318)
T KOG0659|consen 227 PEMTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQA 278 (318)
T ss_pred ccccccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHH
Confidence 2 2335577999999999999999999543
No 20
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=2.9e-39 Score=354.15 Aligned_cols=240 Identities=30% Similarity=0.411 Sum_probs=201.5
Q ss_pred CCCccceeeecCceEEEEEEECC--eEEEEEEecCCCCC--CchhHHHHHHHHHhcCCCceeeEecccC--CceEEEEEe
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEY 538 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~~--~~VAvK~l~~~~~~--~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~Ey 538 (824)
+|.....||+|+||.||||+.+. ..||+|.+.+.... ..+.+.+|++|++.|+|||||.+++.|+ ..+++|.||
T Consensus 3 ~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte~ 82 (808)
T KOG0597|consen 3 QYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTEY 82 (808)
T ss_pred chhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEehh
Confidence 56667789999999999997664 78999998765332 2345889999999999999999999995 468899999
Q ss_pred cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccc
Q 003384 539 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEI 618 (824)
Q Consensus 539 ~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~ 618 (824)
+.| +|..+|. ....+++..+..|+.++..||.|||+ ++|+|||+||.||||+.+|++|++|||+|+.+.....
T Consensus 83 a~g-~L~~il~---~d~~lpEe~v~~~a~~LVsaL~yLhs---~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t~ 155 (808)
T KOG0597|consen 83 AVG-DLFTILE---QDGKLPEEQVRAIAYDLVSALYYLHS---NRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNTS 155 (808)
T ss_pred hhh-hHHHHHH---hccCCCHHHHHHHHHHHHHHHHHHHh---cCcccccCCcceeeecCCCceeechhhhhhhcccCce
Confidence 977 9999994 44569999999999999999999999 8999999999999999999999999999997765321
Q ss_pred cCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCCCCC
Q 003384 619 SSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWP 698 (824)
Q Consensus 619 ~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p 698 (824)
..+...|||.|||||...++.|+..+|+||+|||+|||++|+|||....-. .+...+-.-...||
T Consensus 156 --------vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~-------~Lv~~I~~d~v~~p 220 (808)
T KOG0597|consen 156 --------VLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSIT-------QLVKSILKDPVKPP 220 (808)
T ss_pred --------eeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHH-------HHHHHHhcCCCCCc
Confidence 125567999999999999999999999999999999999999999533221 12222222334577
Q ss_pred hhhHHHHHHHHHHHhhhccCCCCChHHH
Q 003384 699 FVQAEQLANLAMRCCEMSRKSRPELGKD 726 (824)
Q Consensus 699 ~~~~~~l~~Li~~Cl~~~P~~RPt~~~~ 726 (824)
...+..+..|+.-.|+.||..|.++.+.
T Consensus 221 ~~~S~~f~nfl~gLL~kdP~~RltW~~L 248 (808)
T KOG0597|consen 221 STASSSFVNFLQGLLIKDPAQRLTWTDL 248 (808)
T ss_pred ccccHHHHHHHHHHhhcChhhcccHHHH
Confidence 8888999999999999999999998543
No 21
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.8e-39 Score=354.53 Aligned_cols=241 Identities=26% Similarity=0.386 Sum_probs=203.4
Q ss_pred CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCCchhHHHHHHHHHhcCCCceeeEeccc--CCceEEEEEecC
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYLP 540 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~--~~~~~LV~Ey~~ 540 (824)
.|..-.+||+|+.|.||.+... +..||||.+........+-+.+|+.+|+.++|+|||.++..| .+..+.|||||+
T Consensus 274 ~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym~ 353 (550)
T KOG0578|consen 274 KYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYME 353 (550)
T ss_pred hhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeecC
Confidence 4566678999999999999765 578999999887766667789999999999999999999987 567889999999
Q ss_pred CCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccccC
Q 003384 541 NGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISS 620 (824)
Q Consensus 541 ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~~ 620 (824)
||+|.|.+. ...+++.++..|+.+++.||.|||. +||||||||.+|||++.+|.+||+|||+|..+.....
T Consensus 354 ggsLTDvVt----~~~~~E~qIA~Icre~l~aL~fLH~---~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~-- 424 (550)
T KOG0578|consen 354 GGSLTDVVT----KTRMTEGQIAAICREILQGLKFLHA---RGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQS-- 424 (550)
T ss_pred CCchhhhhh----cccccHHHHHHHHHHHHHHHHHHHh---cceeeeccccceeEeccCCcEEEeeeeeeeccccccC--
Confidence 999999984 3348999999999999999999999 8999999999999999999999999999987765432
Q ss_pred CCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCCCCChh
Q 003384 621 NNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFV 700 (824)
Q Consensus 621 ~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~ 700 (824)
.+...+|||+|||||+.....|++++||||||++++||+-|+|||-..+.....+.... -. ......+..
T Consensus 425 ------KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~---ng-~P~lk~~~k 494 (550)
T KOG0578|consen 425 ------KRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIAT---NG-TPKLKNPEK 494 (550)
T ss_pred ------ccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhh---cC-CCCcCCccc
Confidence 23667899999999999999999999999999999999999999965544332221110 00 112234566
Q ss_pred hHHHHHHHHHHHhhhccCCCCChH
Q 003384 701 QAEQLANLAMRCCEMSRKSRPELG 724 (824)
Q Consensus 701 ~~~~l~~Li~~Cl~~~P~~RPt~~ 724 (824)
.+..|.+|+.+||+.|+.+||++.
T Consensus 495 lS~~~kdFL~~cL~~dv~~RasA~ 518 (550)
T KOG0578|consen 495 LSPELKDFLDRCLVVDVEQRASAK 518 (550)
T ss_pred cCHHHHHHHHHHhhcchhcCCCHH
Confidence 788999999999999999999994
No 22
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-38 Score=351.01 Aligned_cols=244 Identities=28% Similarity=0.401 Sum_probs=200.3
Q ss_pred hcCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCC----CC-CCchhHHHHHHHHHhcC-CCceeeEeccc--CCc
Q 003384 462 ATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPH----SL-QGPSEFQQEIDILSKIR-HPNLVTLVGAC--PEV 531 (824)
Q Consensus 462 ~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~----~~-~~~~~f~~Ei~iL~~l~-HpnIv~L~g~~--~~~ 531 (824)
..+.|...+.||+|+||+||.|... +..||||++... .. ...+.+.+|+.+++.++ ||||++++.++ ...
T Consensus 15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~ 94 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTK 94 (370)
T ss_pred ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCe
Confidence 4568999999999999999999774 689999987654 11 22346778999999999 99999999987 457
Q ss_pred eEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCC-Ccceeeccccc
Q 003384 532 WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDAN-FVSKLSDFGIS 610 (824)
Q Consensus 532 ~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~-~~vKL~DFGla 610 (824)
.++||||+.||+|.+++.. ..++.+.....++.|++.|+.|+|+ +||+||||||+|||||.+ +++||+|||++
T Consensus 95 ~~ivmEy~~gGdL~~~i~~---~g~l~E~~ar~~F~Qlisav~y~H~---~gi~HRDLK~ENilld~~~~~~Kl~DFG~s 168 (370)
T KOG0583|consen 95 IYIVMEYCSGGDLFDYIVN---KGRLKEDEARKYFRQLISAVAYCHS---RGIVHRDLKPENILLDGNEGNLKLSDFGLS 168 (370)
T ss_pred EEEEEEecCCccHHHHHHH---cCCCChHHHHHHHHHHHHHHHHHHh---CCEeeCCCCHHHEEecCCCCCEEEeccccc
Confidence 9999999999999999953 5678889999999999999999999 899999999999999999 99999999999
Q ss_pred cccc-cccccCCCccccccCCCCCCcccCChhhhccCC-CC-cchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccc
Q 003384 611 RFLS-QNEISSNNTTLCCRTDPKGTFAYMDPEFLASGE-LT-PKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLK 687 (824)
Q Consensus 611 ~~~~-~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~t-~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~ 687 (824)
.... .... .....||+.|+|||++.+.. |+ .++||||+||+||-|++|+.||+..+.......
T Consensus 169 ~~~~~~~~~---------l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~k----- 234 (370)
T KOG0583|consen 169 AISPGEDGL---------LKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRK----- 234 (370)
T ss_pred cccCCCCCc---------ccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHH-----
Confidence 9773 2221 13456999999999999977 86 789999999999999999999987543322212
Q ss_pred cccCCCCCCCChhh-HHHHHHHHHHHhhhccCCCCChHHHHH
Q 003384 688 NLLDPLAGDWPFVQ-AEQLANLAMRCCEMSRKSRPELGKDVW 728 (824)
Q Consensus 688 ~~ld~~~~~~p~~~-~~~l~~Li~~Cl~~~P~~RPt~~~~v~ 728 (824)
+....-.+|... +..+..|+.+||..+|..|+++ .++.
T Consensus 235 --i~~~~~~~p~~~~S~~~~~Li~~mL~~~P~~R~t~-~~i~ 273 (370)
T KOG0583|consen 235 --IRKGEFKIPSYLLSPEARSLIEKMLVPDPSTRITL-LEIL 273 (370)
T ss_pred --HhcCCccCCCCcCCHHHHHHHHHHcCCCcccCCCH-HHHh
Confidence 111112234444 7899999999999999999999 4443
No 23
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=6.4e-39 Score=369.96 Aligned_cols=255 Identities=29% Similarity=0.530 Sum_probs=213.3
Q ss_pred CCCCccceeeecCceEEEEEEECC-------eEEEEEEecCCCCC-CchhHHHHHHHHHhcCCCceeeEecccC--CceE
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLLRH-------MQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWT 533 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~~~-------~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~ 533 (824)
.+....+.||+|+||+||+|...+ ..||||.++..... ...+|++|+++|..|+|||||+|+|.|. +..+
T Consensus 486 ~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~ 565 (774)
T KOG1026|consen 486 SDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLC 565 (774)
T ss_pred hheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeE
Confidence 345566789999999999997653 46999999876554 4678999999999999999999999994 5689
Q ss_pred EEEEecCCCChhhhhhccC-------C----CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcc
Q 003384 534 LVYEYLPNGSLEDRLSCKD-------N----SPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVS 602 (824)
Q Consensus 534 LV~Ey~~ggsL~~~L~~~~-------~----~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~v 602 (824)
+|+|||..|+|.++|.... . .++|+..+.+.||.|||.|+.||-+ +.+|||||-..|+||.++..|
T Consensus 566 MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~---~~FVHRDLATRNCLVge~l~V 642 (774)
T KOG1026|consen 566 MVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSS---HHFVHRDLATRNCLVGENLVV 642 (774)
T ss_pred EEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CcccccchhhhhceeccceEE
Confidence 9999999999999995421 1 3459999999999999999999999 779999999999999999999
Q ss_pred eeeccccccccccccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHh-CCCCCCCc--hHHHH
Q 003384 603 KLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGIT--KEVQY 679 (824)
Q Consensus 603 KL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELlt-G~~Pf~~~--~~~~~ 679 (824)
||+||||++.....++.... ....-.++||+||.+..++|+.+||||||||||||++| |+.|+.+. .++..
T Consensus 643 KIsDfGLsRdiYssDYYk~~------~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe 716 (774)
T KOG1026|consen 643 KISDFGLSRDIYSSDYYKVR------GNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIE 716 (774)
T ss_pred Eecccccchhhhhhhhhccc------CCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHHHH
Confidence 99999999976655543322 12234679999999999999999999999999999998 88888654 33444
Q ss_pred HHhhhccccccCCCCCCCChhhHHHHHHHHHHHhhhccCCCCChHHHHHHHHHHHHh
Q 003384 680 ALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRA 736 (824)
Q Consensus 680 ~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le~l~~ 736 (824)
.+..|.+ ...|..++..+..|+..||+.+|.+||++ ++|..+|+....
T Consensus 717 ~i~~g~l--------L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF-~eI~~~L~~~~~ 764 (774)
T KOG1026|consen 717 CIRAGQL--------LSCPENCPTEVYSLMLECWNENPKRRPSF-KEIHSRLQAWAQ 764 (774)
T ss_pred HHHcCCc--------ccCCCCCCHHHHHHHHHHhhcCcccCCCH-HHHHHHHHHHHh
Confidence 4555544 23577888999999999999999999999 788888887654
No 24
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.4e-38 Score=337.93 Aligned_cols=257 Identities=25% Similarity=0.322 Sum_probs=206.0
Q ss_pred hcCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCC-CchhHHHHHHHHHhcCCCceeeEeccc--CCceEEEE
Q 003384 462 ATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVY 536 (824)
Q Consensus 462 ~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIv~L~g~~--~~~~~LV~ 536 (824)
..+.|.....||.|..++||+|++. +..||||+++..... +.+.+.+|+..|+.++||||++++.+| ....++||
T Consensus 24 n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVm 103 (516)
T KOG0582|consen 24 NAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVM 103 (516)
T ss_pred CccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEee
Confidence 3457888899999999999999875 688999999876433 357899999999999999999999988 56789999
Q ss_pred EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccc
Q 003384 537 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQN 616 (824)
Q Consensus 537 Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~ 616 (824)
.||.+||+.+++...-.. .+++..+..|..++++||.|||+ +|.||||||+.||||+.+|.|||+|||.+-.+...
T Consensus 104 pfMa~GS~ldIik~~~~~-Gl~E~~Ia~iLre~LkaL~YLH~---~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~ 179 (516)
T KOG0582|consen 104 PFMAGGSLLDIIKTYYPD-GLEEASIATILREVLKALDYLHQ---NGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDS 179 (516)
T ss_pred hhhcCCcHHHHHHHHccc-cccHHHHHHHHHHHHHHHHHHHh---cCceecccccccEEEcCCCcEEEcCceeeeeeccc
Confidence 999999999999655333 38899999999999999999999 99999999999999999999999999998876654
Q ss_pred cccCCCccccccCCCCCCcccCChhhhcc--CCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhh--hccccccC-
Q 003384 617 EISSNNTTLCCRTDPKGTFAYMDPEFLAS--GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDT--GKLKNLLD- 691 (824)
Q Consensus 617 ~~~~~~~~~~~~~~~~GT~~Y~APE~l~~--~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~--~~~~~~ld- 691 (824)
+. ... ......+||++|||||++.. .+|+.|+||||||++..||.+|..||.........+.. +.....+.
T Consensus 180 G~---R~~-~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~t~ 255 (516)
T KOG0582|consen 180 GD---RQV-TRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLLTS 255 (516)
T ss_pred Cc---eee-EeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcccc
Confidence 41 111 11167789999999999754 48999999999999999999999999877665543322 21111110
Q ss_pred CCCCCCChhhHHHHHHHHHHHhhhccCCCCChHHH
Q 003384 692 PLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKD 726 (824)
Q Consensus 692 ~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~ 726 (824)
....+........+.+++..||+.||.+||+..+.
T Consensus 256 ~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskL 290 (516)
T KOG0582|consen 256 GLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKL 290 (516)
T ss_pred cCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHH
Confidence 00111112234589999999999999999998443
No 25
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-39 Score=352.42 Aligned_cols=236 Identities=28% Similarity=0.493 Sum_probs=195.2
Q ss_pred cceeeecCceEEEEEEECCeEEEEEEecCCCCCCchhHHHHHHHHHhcCCCceeeEecccC--CceEEEEEecCCCChhh
Q 003384 469 SLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYLPNGSLED 546 (824)
Q Consensus 469 ~~~LG~G~fG~Vykg~~~~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~Ey~~ggsL~~ 546 (824)
+..||.|+.|-||.|.+.+..||||+++... ..+|.-|++|+||||+.+.|+|. ..++||||||+.|-|..
T Consensus 129 LeWlGSGaQGAVF~Grl~netVAVKKV~elk-------ETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL~~ 201 (904)
T KOG4721|consen 129 LEWLGSGAQGAVFLGRLHNETVAVKKVRELK-------ETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQLYE 201 (904)
T ss_pred hhhhccCcccceeeeeccCceehhHHHhhhh-------hhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccccHHH
Confidence 3469999999999999999999999875422 34778899999999999999995 46889999999999999
Q ss_pred hhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccccCCCcccc
Q 003384 547 RLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLC 626 (824)
Q Consensus 547 ~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~~~~~~~~ 626 (824)
+|. ...+++......|..+||.|+.|||. +.|||||||+-||||..+..|||+|||.++-.....+
T Consensus 202 VLk---a~~~itp~llv~Wsk~IA~GM~YLH~---hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~ST-------- 267 (904)
T KOG4721|consen 202 VLK---AGRPITPSLLVDWSKGIAGGMNYLHL---HKIIHRDLKSPNILISYDDVVKISDFGTSKELSDKST-------- 267 (904)
T ss_pred HHh---ccCccCHHHHHHHHHHhhhhhHHHHH---hhHhhhccCCCceEeeccceEEeccccchHhhhhhhh--------
Confidence 994 44567778889999999999999999 7799999999999999999999999999886654321
Q ss_pred ccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCCCCChhhHHHHH
Q 003384 627 CRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLA 706 (824)
Q Consensus 627 ~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~ 706 (824)
+..+.||..|||||++.+.+.+.|+|||||||||||||||..||...+.....+-.| .+. +....|..+++-|.
T Consensus 268 -kMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVG--sNs---L~LpvPstcP~Gfk 341 (904)
T KOG4721|consen 268 -KMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVG--SNS---LHLPVPSTCPDGFK 341 (904)
T ss_pred -hhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEEecc--CCc---ccccCcccCchHHH
Confidence 245679999999999999999999999999999999999999996554322211111 111 22345677788999
Q ss_pred HHHHHHhhhccCCCCChHHHHHHHHH
Q 003384 707 NLAMRCCEMSRKSRPELGKDVWRVLE 732 (824)
Q Consensus 707 ~Li~~Cl~~~P~~RPt~~~~v~~~Le 732 (824)
-|+.+||+..|.+||++++ ++..|+
T Consensus 342 lL~Kqcw~sKpRNRPSFrq-il~Hld 366 (904)
T KOG4721|consen 342 LLLKQCWNSKPRNRPSFRQ-ILLHLD 366 (904)
T ss_pred HHHHHHHhcCCCCCccHHH-HHHHHh
Confidence 9999999999999999955 444444
No 26
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-38 Score=355.41 Aligned_cols=240 Identities=23% Similarity=0.307 Sum_probs=200.8
Q ss_pred hcCCCCccceeeecCceEEEEEEECC--eEEEEEEecCCCC---CCchhHHHHHHHHHhcC-CCceeeEeccc--CCceE
Q 003384 462 ATHNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSL---QGPSEFQQEIDILSKIR-HPNLVTLVGAC--PEVWT 533 (824)
Q Consensus 462 ~~~~f~~~~~LG~G~fG~Vykg~~~~--~~VAvK~l~~~~~---~~~~~f~~Ei~iL~~l~-HpnIv~L~g~~--~~~~~ 533 (824)
...+|...++||+|.||+|+++.+++ ..+|||++++... .+.+....|..|+.... ||.++.|+.+| .++.|
T Consensus 366 ~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~ 445 (694)
T KOG0694|consen 366 TLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLF 445 (694)
T ss_pred cccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEE
Confidence 44679999999999999999998874 6799999988643 33456778999998885 99999999999 46899
Q ss_pred EEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccc
Q 003384 534 LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFL 613 (824)
Q Consensus 534 LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~ 613 (824)
.||||+.||++..+. ....|++.....++.+++.||.|||. +|||+||||.+|||||..|++||+|||||+-.
T Consensus 446 fvmey~~Ggdm~~~~----~~~~F~e~rarfyaAev~l~L~fLH~---~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~ 518 (694)
T KOG0694|consen 446 FVMEYVAGGDLMHHI----HTDVFSEPRARFYAAEVVLGLQFLHE---NGIIYRDLKLDNLLLDTEGHVKIADFGLCKEG 518 (694)
T ss_pred EEEEecCCCcEEEEE----ecccccHHHHHHHHHHHHHHHHHHHh---cCceeeecchhheEEcccCcEEeccccccccc
Confidence 999999999954443 44569999999999999999999999 99999999999999999999999999999854
Q ss_pred ccccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCC
Q 003384 614 SQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPL 693 (824)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~ 693 (824)
.-.+ .. .++..|||.|||||++.+..|+.++|||||||+|||||+|++||.++++.+..- .+-..
T Consensus 519 m~~g--~~------TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~Fd-------sI~~d 583 (694)
T KOG0694|consen 519 MGQG--DR------TSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFD-------SIVND 583 (694)
T ss_pred CCCC--Cc------cccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHH-------HHhcC
Confidence 3221 11 145679999999999999999999999999999999999999998776543211 11112
Q ss_pred CCCCChhhHHHHHHHHHHHhhhccCCCCCh
Q 003384 694 AGDWPFVQAEQLANLAMRCCEMSRKSRPEL 723 (824)
Q Consensus 694 ~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~ 723 (824)
...+|...+.+...++.++|..+|++|-.+
T Consensus 584 ~~~yP~~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 584 EVRYPRFLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred CCCCCCcccHHHHHHHHHHhccCcccccCC
Confidence 234678889999999999999999999876
No 27
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=1e-37 Score=339.09 Aligned_cols=259 Identities=27% Similarity=0.462 Sum_probs=197.1
Q ss_pred CCCCccceeeecCceEEEEEEEC------------------CeEEEEEEecCCCCC-CchhHHHHHHHHHhcCCCceeeE
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLLR------------------HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTL 524 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~~------------------~~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIv~L 524 (824)
++|...++||+|+||.||++.+. +..||+|++...... ....|.+|+.+|.+++||||+++
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 84 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL 84 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence 46788889999999999999753 236999998764322 23468899999999999999999
Q ss_pred ecccC--CceEEEEEecCCCChhhhhhccC----------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEe
Q 003384 525 VGACP--EVWTLVYEYLPNGSLEDRLSCKD----------------NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH 586 (824)
Q Consensus 525 ~g~~~--~~~~LV~Ey~~ggsL~~~L~~~~----------------~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiH 586 (824)
+|+|. +..++||||+++|+|.+++.... ....+++..++.++.|++.||.|||+ ++|+|
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~---~~ivH 161 (304)
T cd05096 85 LGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSS---LNFVH 161 (304)
T ss_pred EEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHH---CCccc
Confidence 99884 46899999999999999885321 12357888999999999999999999 88999
Q ss_pred ccccCCcEEecCCCcceeeccccccccccccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHh
Q 003384 587 GDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT 666 (824)
Q Consensus 587 rDLKp~NILld~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELlt 666 (824)
|||||+|||++.++.+||+|||+++.+....... ......++..|+|||++.++.++.++|||||||++|||++
T Consensus 162 ~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~ 235 (304)
T cd05096 162 RDLATRNCLVGENLTIKIADFGMSRNLYAGDYYR------IQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILM 235 (304)
T ss_pred cCcchhheEEcCCccEEECCCccceecccCceeE------ecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHH
Confidence 9999999999999999999999998654332111 1123456889999999998899999999999999999987
Q ss_pred --CCCCCCCchHHHHHHhhhc-cccccCCCCCCCChhhHHHHHHHHHHHhhhccCCCCChHHHHHHHHH
Q 003384 667 --GRPALGITKEVQYALDTGK-LKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLE 732 (824)
Q Consensus 667 --G~~Pf~~~~~~~~~~~~~~-~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le 732 (824)
|..||.............. +...........+...+..+.+|+.+||+.+|.+||++ +++.+.|+
T Consensus 236 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~-~~i~~~l~ 303 (304)
T cd05096 236 LCKEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSF-SDIHAFLT 303 (304)
T ss_pred ccCCCCCCcCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCH-HHHHHHHh
Confidence 5577764432221111110 00000111112233456789999999999999999999 66666664
No 28
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=1e-37 Score=336.35 Aligned_cols=241 Identities=25% Similarity=0.343 Sum_probs=193.2
Q ss_pred CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCC---CchhHHHHHHHHHhcCCCceeeEecccC--CceEEEEE
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ---GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYE 537 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~---~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~E 537 (824)
.|...+.||+|+||.||+|... +..||||.+...... ....+.+|+.+++.++||||+++++++. +..++|||
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence 3677789999999999999874 688999998654322 2235788999999999999999999873 46889999
Q ss_pred ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccccc
Q 003384 538 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNE 617 (824)
Q Consensus 538 y~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~ 617 (824)
|+++|+|.+++.... ...+++..+..++.|++.||.|||+ ++|+||||||+|||++.++.+||+|||++.......
T Consensus 81 ~~~~g~L~~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~---~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~ 156 (285)
T cd05631 81 IMNGGDLKFHIYNMG-NPGFDEQRAIFYAAELCCGLEDLQR---ERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGE 156 (285)
T ss_pred ecCCCcHHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCC
Confidence 999999998875332 3468999999999999999999999 899999999999999999999999999998653321
Q ss_pred ccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHH--HHHhhhccccccCCCCC
Q 003384 618 ISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQ--YALDTGKLKNLLDPLAG 695 (824)
Q Consensus 618 ~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~--~~~~~~~~~~~ld~~~~ 695 (824)
. .....||+.|+|||++.+..++.++|||||||+||+|++|++||....... ..+.. .+.....
T Consensus 157 ~---------~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~-----~~~~~~~ 222 (285)
T cd05631 157 T---------VRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDR-----RVKEDQE 222 (285)
T ss_pred e---------ecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHH-----Hhhcccc
Confidence 1 123468999999999999999999999999999999999999997543211 11111 0111112
Q ss_pred CCChhhHHHHHHHHHHHhhhccCCCCCh
Q 003384 696 DWPFVQAEQLANLAMRCCEMSRKSRPEL 723 (824)
Q Consensus 696 ~~p~~~~~~l~~Li~~Cl~~~P~~RPt~ 723 (824)
.++...+..+.+|+.+||+.+|.+||+.
T Consensus 223 ~~~~~~s~~~~~li~~~l~~~P~~R~~~ 250 (285)
T cd05631 223 EYSEKFSEDAKSICRMLLTKNPKERLGC 250 (285)
T ss_pred cCCccCCHHHHHHHHHHhhcCHHHhcCC
Confidence 2344456789999999999999999984
No 29
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=7.3e-38 Score=338.68 Aligned_cols=232 Identities=26% Similarity=0.367 Sum_probs=193.3
Q ss_pred CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC---CCchhHHHHHHHHHhcCCCceeeEecccC--CceEEEEE
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYE 537 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~---~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~E 537 (824)
+|...+.||+|+||.||+|... +..||||++..... .....+.+|+.+++.++||||+++++++. ...++|||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 81 (291)
T cd05612 2 DLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLME 81 (291)
T ss_pred CceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEEe
Confidence 6788899999999999999886 68899999865322 22456889999999999999999999874 46789999
Q ss_pred ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccccc
Q 003384 538 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNE 617 (824)
Q Consensus 538 y~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~ 617 (824)
|+++|+|.+++.. ...+++.....++.|++.||.|||+ +||+||||||+|||++.++.+||+|||+++......
T Consensus 82 ~~~~~~L~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~~ 155 (291)
T cd05612 82 YVPGGELFSYLRN---SGRFSNSTGLFYASEIVCALEYLHS---KEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDRT 155 (291)
T ss_pred CCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHeEECCCCCEEEEecCcchhccCCc
Confidence 9999999999853 3468899999999999999999999 899999999999999999999999999987653211
Q ss_pred ccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHH--HHhhhccccccCCCCC
Q 003384 618 ISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQY--ALDTGKLKNLLDPLAG 695 (824)
Q Consensus 618 ~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~--~~~~~~~~~~ld~~~~ 695 (824)
....||+.|+|||++.+..++.++|||||||++|+|+||++||........ .+..+ ..
T Consensus 156 -----------~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~---------~~ 215 (291)
T cd05612 156 -----------WTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAG---------KL 215 (291)
T ss_pred -----------ccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC---------Cc
Confidence 224589999999999998999999999999999999999999976543221 11111 11
Q ss_pred CCChhhHHHHHHHHHHHhhhccCCCCC
Q 003384 696 DWPFVQAEQLANLAMRCCEMSRKSRPE 722 (824)
Q Consensus 696 ~~p~~~~~~l~~Li~~Cl~~~P~~RPt 722 (824)
.+|...+..+.+|+.+||+.+|.+||+
T Consensus 216 ~~~~~~~~~~~~li~~~l~~dp~~R~~ 242 (291)
T cd05612 216 EFPRHLDLYAKDLIKKLLVVDRTRRLG 242 (291)
T ss_pred CCCccCCHHHHHHHHHHcCCCHHHccC
Confidence 234445678999999999999999996
No 30
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2e-37 Score=335.18 Aligned_cols=249 Identities=28% Similarity=0.374 Sum_probs=194.1
Q ss_pred hcCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCC--------------CchhHHHHHHHHHhcCCCceeeEe
Q 003384 462 ATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ--------------GPSEFQQEIDILSKIRHPNLVTLV 525 (824)
Q Consensus 462 ~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~--------------~~~~f~~Ei~iL~~l~HpnIv~L~ 525 (824)
.-++|.+...||+|.||.|-+|+.. ++.||||++.+.... ..+.+.+||.||++|+|||||+|+
T Consensus 95 ~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~Li 174 (576)
T KOG0585|consen 95 QLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLI 174 (576)
T ss_pred ehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEE
Confidence 3457999999999999999999875 588999999653211 124688999999999999999999
Q ss_pred cccC----CceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCc
Q 003384 526 GACP----EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFV 601 (824)
Q Consensus 526 g~~~----~~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~ 601 (824)
.+.. +.+|||+|||..|.+...= .....|+..+.+.|+.++..||.|||+ +|||||||||+|+||+.+|+
T Consensus 175 EvLDDP~s~~~YlVley~s~G~v~w~p---~d~~els~~~Ar~ylrDvv~GLEYLH~---QgiiHRDIKPsNLLl~~~g~ 248 (576)
T KOG0585|consen 175 EVLDDPESDKLYLVLEYCSKGEVKWCP---PDKPELSEQQARKYLRDVVLGLEYLHY---QGIIHRDIKPSNLLLSSDGT 248 (576)
T ss_pred EeecCcccCceEEEEEeccCCccccCC---CCcccccHHHHHHHHHHHHHHHHHHHh---cCeeccccchhheEEcCCCc
Confidence 9873 4789999999998875532 233339999999999999999999999 89999999999999999999
Q ss_pred ceeeccccccccccccccCCCccccccCCCCCCcccCChhhhccCC----CCcchhHHhHHHHHHHHHhCCCCCCCchHH
Q 003384 602 SKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGE----LTPKSDVYSFGIILLRLLTGRPALGITKEV 677 (824)
Q Consensus 602 vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~----~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~ 677 (824)
+||+|||.+..+.......... .....+|||.|+|||...++. .+.+.||||+||+||.|+.|+.||-.....
T Consensus 249 VKIsDFGVs~~~~~~~~~~~d~---~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~ 325 (576)
T KOG0585|consen 249 VKISDFGVSNEFPQGSDEGSDD---QLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFEL 325 (576)
T ss_pred EEeeccceeeecccCCccccHH---HHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHH
Confidence 9999999998764442111111 113367999999999987742 245789999999999999999999765544
Q ss_pred HHHHhhhccccccCCCCCCCChhhHHHHHHHHHHHhhhccCCCCChH
Q 003384 678 QYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELG 724 (824)
Q Consensus 678 ~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~ 724 (824)
...-. .... ++.-+-.....+.+.+||.++|.+||+.|.++.
T Consensus 326 ~l~~K--Ivn~---pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~ 367 (576)
T KOG0585|consen 326 ELFDK--IVND---PLEFPENPEINEDLKDLIKRLLEKDPEQRITLP 367 (576)
T ss_pred HHHHH--HhcC---cccCCCcccccHHHHHHHHHHhhcChhheeehh
Confidence 32211 1111 221111124567899999999999999999983
No 31
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=1.9e-37 Score=341.93 Aligned_cols=245 Identities=27% Similarity=0.357 Sum_probs=196.4
Q ss_pred CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC---CCchhHHHHHHHHHhcCCCceeeEecccC--CceEEEE
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVY 536 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~---~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~ 536 (824)
++|...+.||+|+||.||+|.+. +..||||++..... .....+.+|+.++..++||||+++++++. +..++||
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 36888999999999999999885 57899999875421 22356889999999999999999999884 4688999
Q ss_pred EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccc
Q 003384 537 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQN 616 (824)
Q Consensus 537 Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~ 616 (824)
||++||+|.+++. ....+++..+..++.|++.||.|||+ ++|+||||||+|||++.++.+||+|||++......
T Consensus 81 e~~~g~~L~~~l~---~~~~l~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~~ 154 (333)
T cd05600 81 EYVPGGDFRTLLN---NLGVLSEDHARFYMAEMFEAVDALHE---LGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVTY 154 (333)
T ss_pred eCCCCCCHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEECCCCCEEEEeCcCCcccccc
Confidence 9999999999994 33468899999999999999999999 89999999999999999999999999999755331
Q ss_pred cccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccC-CCCC
Q 003384 617 EISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLD-PLAG 695 (824)
Q Consensus 617 ~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld-~~~~ 695 (824)
.....||+.|+|||++.+..++.++|||||||++|||++|++||..................+. +...
T Consensus 155 -----------~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 223 (333)
T cd05600 155 -----------ANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYD 223 (333)
T ss_pred -----------cCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCCCC
Confidence 1334699999999999999999999999999999999999999976543322111111111111 1111
Q ss_pred CCChhhHHHHHHHHHHHhhhccCCCCChHH
Q 003384 696 DWPFVQAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 696 ~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
......+..+.+|+.+||..+|.+||++.+
T Consensus 224 ~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ 253 (333)
T cd05600 224 DPRFNLSDEAWDLITKLINDPSRRFGSLED 253 (333)
T ss_pred ccccccCHHHHHHHHHHhhChhhhcCCHHH
Confidence 111234678999999999999999999843
No 32
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=9.2e-38 Score=344.26 Aligned_cols=234 Identities=22% Similarity=0.335 Sum_probs=194.3
Q ss_pred CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCC---CCCchhHHHHHHHHHhcCCCceeeEecccC--CceEEEE
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS---LQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVY 536 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~---~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~ 536 (824)
.+|...+.||+|+||.||+|.+. +..||||++.... ......+.+|+.+++.++||||+++++++. +..++||
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 97 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL 97 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence 46888899999999999999886 5789999987532 123456889999999999999999999883 5689999
Q ss_pred EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccc
Q 003384 537 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQN 616 (824)
Q Consensus 537 Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~ 616 (824)
||++||+|.+++.. ...+++.....++.|++.||.|||+ ++|+||||||+|||++.++.+||+|||+++.....
T Consensus 98 e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 171 (329)
T PTZ00263 98 EFVVGGELFTHLRK---AGRFPNDVAKFYHAELVLAFEYLHS---KDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDR 171 (329)
T ss_pred cCCCCChHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHEEECCCCCEEEeeccCceEcCCC
Confidence 99999999999853 3468888999999999999999999 89999999999999999999999999999865332
Q ss_pred cccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHH--HHhhhccccccCCCC
Q 003384 617 EISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQY--ALDTGKLKNLLDPLA 694 (824)
Q Consensus 617 ~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~--~~~~~~~~~~ld~~~ 694 (824)
. ....||+.|+|||++.+..++.++|||||||++|+|+||++||........ .+..+ .
T Consensus 172 ~-----------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~---------~ 231 (329)
T PTZ00263 172 T-----------FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAG---------R 231 (329)
T ss_pred c-----------ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcC---------C
Confidence 1 123589999999999999999999999999999999999999976543321 11111 1
Q ss_pred CCCChhhHHHHHHHHHHHhhhccCCCCCh
Q 003384 695 GDWPFVQAEQLANLAMRCCEMSRKSRPEL 723 (824)
Q Consensus 695 ~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~ 723 (824)
..+|...+..+.+|+.+||+.+|.+||+.
T Consensus 232 ~~~p~~~~~~~~~li~~~L~~dP~~R~~~ 260 (329)
T PTZ00263 232 LKFPNWFDGRARDLVKGLLQTDHTKRLGT 260 (329)
T ss_pred cCCCCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence 12344456789999999999999999973
No 33
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-38 Score=341.69 Aligned_cols=244 Identities=26% Similarity=0.397 Sum_probs=198.0
Q ss_pred CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCCchh--HHHHHHHHHhcC-CCceeeEecccCC---ceEEE
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSE--FQQEIDILSKIR-HPNLVTLVGACPE---VWTLV 535 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~--f~~Ei~iL~~l~-HpnIv~L~g~~~~---~~~LV 535 (824)
.+|...++||.|.||.||+|+.. +..||||.++..-.. .++ -.+|+.-|++|+ |||||+|...+.+ ..++|
T Consensus 10 ~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s-~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fV 88 (538)
T KOG0661|consen 10 DRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYS-WEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFV 88 (538)
T ss_pred HHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhcc-HHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeee
Confidence 46888899999999999999764 678999998765433 333 458999999999 9999999998843 57999
Q ss_pred EEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccc
Q 003384 536 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQ 615 (824)
Q Consensus 536 ~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~ 615 (824)
||||+ .+|++++..+ ..+|++..+..|+.||++||+|+|. +|+.||||||+|||+..+..+||+|||||+.+..
T Consensus 89 fE~Md-~NLYqLmK~R--~r~fse~~irnim~QilqGL~hiHk---~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~S 162 (538)
T KOG0661|consen 89 FEFMD-CNLYQLMKDR--NRLFSESDIRNIMYQILQGLAHIHK---HGFFHRDLKPENILISGNDVIKIADFGLAREVRS 162 (538)
T ss_pred HHhhh-hhHHHHHhhc--CCcCCHHHHHHHHHHHHHHHHHHHh---cCcccccCChhheEecccceeEeccccccccccc
Confidence 99995 5999999644 6789999999999999999999999 9999999999999999999999999999997653
Q ss_pred ccccCCCccccccCCCCCCcccCChhhhcc-CCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCC
Q 003384 616 NEISSNNTTLCCRTDPKGTFAYMDPEFLAS-GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLA 694 (824)
Q Consensus 616 ~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~ 694 (824)
... .+..+.|.+|.|||++.. +-|+.+.|+|++|||++|+.+-+|.|.+.++++.....-.+ +..|..
T Consensus 163 kpP---------YTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~V--LGtP~~ 231 (538)
T KOG0661|consen 163 KPP---------YTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEV--LGTPDK 231 (538)
T ss_pred CCC---------cchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHH--hCCCcc
Confidence 321 145568999999998754 67999999999999999999999999988877655432110 001111
Q ss_pred CCCC-------------------------hhhHHHHHHHHHHHhhhccCCCCChHH
Q 003384 695 GDWP-------------------------FVQAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 695 ~~~p-------------------------~~~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
..|+ ...+.++.+|+.+||..||.+|||+.+
T Consensus 232 ~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~ 287 (538)
T KOG0661|consen 232 DSWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQ 287 (538)
T ss_pred ccchhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHH
Confidence 1111 124678899999999999999999943
No 34
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=3.9e-37 Score=345.66 Aligned_cols=253 Identities=24% Similarity=0.399 Sum_probs=198.5
Q ss_pred cCCCCccceeeecCceEEEEEEEC-------CeEEEEEEecCCCC-CCchhHHHHHHHHHhc-CCCceeeEecccC--Cc
Q 003384 463 THNFDPSLKIGEGGYGSIYKGLLR-------HMQVAIKMLHPHSL-QGPSEFQQEIDILSKI-RHPNLVTLVGACP--EV 531 (824)
Q Consensus 463 ~~~f~~~~~LG~G~fG~Vykg~~~-------~~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l-~HpnIv~L~g~~~--~~ 531 (824)
..+|...+.||+|+||.||+|.+. +..||||+++.... .....+.+|+.+|..+ +||||++++|+|. +.
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~ 113 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGP 113 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCc
Confidence 346888999999999999999742 35799999875432 2235688999999999 8999999999984 46
Q ss_pred eEEEEEecCCCChhhhhhccCC----------------------------------------------------------
Q 003384 532 WTLVYEYLPNGSLEDRLSCKDN---------------------------------------------------------- 553 (824)
Q Consensus 532 ~~LV~Ey~~ggsL~~~L~~~~~---------------------------------------------------------- 553 (824)
.++||||++||+|.+++.....
T Consensus 114 ~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (375)
T cd05104 114 TLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGS 193 (375)
T ss_pred ceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccce
Confidence 8899999999999998854211
Q ss_pred --------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccccccc
Q 003384 554 --------------SPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEIS 619 (824)
Q Consensus 554 --------------~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~ 619 (824)
...+++..++.++.+|+.||.|||+ ++|+||||||+|||++.++.+||+|||+++........
T Consensus 194 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 270 (375)
T cd05104 194 YIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNY 270 (375)
T ss_pred ecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCchhhEEEECCCcEEEecCccceeccCcccc
Confidence 1257889999999999999999999 89999999999999999999999999999865432211
Q ss_pred CCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHh-CCCCCCCchHH---HHHHhhhccccccCCCCC
Q 003384 620 SNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEV---QYALDTGKLKNLLDPLAG 695 (824)
Q Consensus 620 ~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELlt-G~~Pf~~~~~~---~~~~~~~~~~~~ld~~~~ 695 (824)
. ..+...++..|+|||++.+..++.++|||||||++|||++ |.+||...... ...+..+. ..
T Consensus 271 ~------~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~--------~~ 336 (375)
T cd05104 271 V------VKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGY--------RM 336 (375)
T ss_pred c------ccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCc--------cC
Confidence 0 0122345778999999999999999999999999999998 89999654321 11111111 11
Q ss_pred CCChhhHHHHHHHHHHHhhhccCCCCChHHHHHHHHHH
Q 003384 696 DWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEP 733 (824)
Q Consensus 696 ~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le~ 733 (824)
..|...+.++.+|+.+||+.+|.+||++ .++++.|+.
T Consensus 337 ~~~~~~~~~l~~li~~cl~~dP~~RPs~-~eil~~l~~ 373 (375)
T cd05104 337 LSPECAPSEMYDIMKSCWDADPLKRPTF-KQIVQLIEQ 373 (375)
T ss_pred CCCCCCCHHHHHHHHHHccCChhHCcCH-HHHHHHHHh
Confidence 1223345689999999999999999999 677777764
No 35
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=5.2e-37 Score=327.08 Aligned_cols=249 Identities=23% Similarity=0.376 Sum_probs=197.9
Q ss_pred CCCCccceeeecCceEEEEEEEC-----CeEEEEEEecCCCCC-CchhHHHHHHHHHhcCCCceeeEecccC--CceEEE
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLLR-----HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLV 535 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~~-----~~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV 535 (824)
.+|...+.||+|+||.||+|.+. +..||+|+++..... ....|.+|+.++.+++||||++++|++. +..++|
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 84 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIV 84 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEE
Confidence 46788889999999999999764 367999998764322 2346889999999999999999999873 468999
Q ss_pred EEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccc
Q 003384 536 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQ 615 (824)
Q Consensus 536 ~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~ 615 (824)
|||+++|+|.+++... ...+++..++.++.+++.||.|||+ ++++||||||+|||++.++.+|++|||++.....
T Consensus 85 ~e~~~~~~L~~~l~~~--~~~l~~~~~~~~~~~i~~al~~lH~---~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~ 159 (266)
T cd05064 85 TEYMSNGALDSFLRKH--EGQLVAGQLMGMLPGLASGMKYLSE---MGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKS 159 (266)
T ss_pred EEeCCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHH---CCEeeccccHhhEEEcCCCcEEECCCcccccccc
Confidence 9999999999998533 3468999999999999999999999 8999999999999999999999999998765322
Q ss_pred ccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHh-CCCCCCCchHHHH--HHhhhccccccCC
Q 003384 616 NEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQY--ALDTGKLKNLLDP 692 (824)
Q Consensus 616 ~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELlt-G~~Pf~~~~~~~~--~~~~~~~~~~ld~ 692 (824)
.... ......++..|+|||.+.+..++.++|||||||++|||++ |.+||........ .+..+
T Consensus 160 ~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~-------- 224 (266)
T cd05064 160 EAIY-------TTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDG-------- 224 (266)
T ss_pred cchh-------cccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCC--------
Confidence 1110 0112345788999999999999999999999999999775 9999975543221 11111
Q ss_pred CCCCCChhhHHHHHHHHHHHhhhccCCCCChHHHHHHHHHH
Q 003384 693 LAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEP 733 (824)
Q Consensus 693 ~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le~ 733 (824)
.....+...+..+.+++.+||+.+|.+||++ +++.+.|..
T Consensus 225 ~~~~~~~~~~~~~~~li~~c~~~~p~~RP~~-~~i~~~l~~ 264 (266)
T cd05064 225 FRLPAPRNCPNLLHQLMLDCWQKERGERPRF-SQIHSILSK 264 (266)
T ss_pred CCCCCCCCCCHHHHHHHHHHcCCCchhCCCH-HHHHHHHHh
Confidence 1112234456789999999999999999999 677777654
No 36
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=7.7e-37 Score=334.39 Aligned_cols=255 Identities=22% Similarity=0.376 Sum_probs=200.3
Q ss_pred CCCCccceeeecCceEEEEEEEC--C----eEEEEEEecCCCC-CCchhHHHHHHHHHhcCCCceeeEecccC-CceEEE
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLLR--H----MQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGACP-EVWTLV 535 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~~--~----~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~-~~~~LV 535 (824)
.+|+..+.||+|+||.||+|.+. + ..||||++..... .....+.+|+.+++.++||||++++|+|. +..++|
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~v 86 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLI 86 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCCCceee
Confidence 36888999999999999999863 2 2489999875432 23457889999999999999999999984 457899
Q ss_pred EEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccc
Q 003384 536 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQ 615 (824)
Q Consensus 536 ~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~ 615 (824)
+||+++|+|.+++... ...+++..++.++.|++.||.|||+ ++|+||||||+|||++.++.+||+|||+++.+..
T Consensus 87 ~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~qi~~~L~~LH~---~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~ 161 (316)
T cd05108 87 TQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLEE---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 161 (316)
T ss_pred eecCCCCCHHHHHHhc--cccCCHHHHHHHHHHHHHHHHHHHh---cCeeccccchhheEecCCCcEEEccccccccccC
Confidence 9999999999998533 3458889999999999999999999 8999999999999999999999999999987654
Q ss_pred ccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHh-CCCCCCCchHHHHHHhhhccccccCCCC
Q 003384 616 NEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLA 694 (824)
Q Consensus 616 ~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELlt-G~~Pf~~~~~~~~~~~~~~~~~~ld~~~ 694 (824)
...... .....++..|+|||++.+..++.++|||||||++|||+| |++||............. . ...
T Consensus 162 ~~~~~~------~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~~~~---~---~~~ 229 (316)
T cd05108 162 DEKEYH------AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE---K---GER 229 (316)
T ss_pred CCccee------ccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh---C---CCC
Confidence 321110 122335778999999999999999999999999999998 999997654322111000 0 011
Q ss_pred CCCChhhHHHHHHHHHHHhhhccCCCCChHHHHHHHHHHHHh
Q 003384 695 GDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRA 736 (824)
Q Consensus 695 ~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le~l~~ 736 (824)
...+...+..+.+++.+||..+|.+||++ .+++..|..+..
T Consensus 230 ~~~~~~~~~~~~~li~~cl~~~p~~Rps~-~~l~~~l~~~~~ 270 (316)
T cd05108 230 LPQPPICTIDVYMIMVKCWMIDADSRPKF-RELIIEFSKMAR 270 (316)
T ss_pred CCCCCCCCHHHHHHHHHHccCChhhCcCH-HHHHHHHHHHHc
Confidence 11233455689999999999999999999 566666666544
No 37
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=1.6e-37 Score=341.25 Aligned_cols=232 Identities=23% Similarity=0.276 Sum_probs=187.7
Q ss_pred ceeeecCceEEEEEEEC--CeEEEEEEecCCCC---CCchhHHHHHHHHHhcCCCceeeEecccC--CceEEEEEecCCC
Q 003384 470 LKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYLPNG 542 (824)
Q Consensus 470 ~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~---~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~Ey~~gg 542 (824)
+.||+|+||.||++... +..||||++..... .....+.+|+.+++.++||||+++++++. +..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 36999999999999875 57899999875422 22345778999999999999999999874 4688999999999
Q ss_pred ChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccccCCC
Q 003384 543 SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNN 622 (824)
Q Consensus 543 sL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~~~~ 622 (824)
+|.+++.. ...+++..+..++.||+.||.|||+ +||+||||||+|||++.++.+||+|||+++........
T Consensus 81 ~L~~~l~~---~~~~~~~~~~~~~~qi~~~L~~lH~---~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~--- 151 (323)
T cd05571 81 ELFFHLSR---ERVFSEDRARFYGAEIVSALGYLHS---CDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGAT--- 151 (323)
T ss_pred cHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCc---
Confidence 99998853 3568999999999999999999999 89999999999999999999999999998753221110
Q ss_pred ccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCCCCChhhH
Q 003384 623 TTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQA 702 (824)
Q Consensus 623 ~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~ 702 (824)
.....||+.|+|||++.+..++.++|||||||++|||+||++||...+........ . .....+|...+
T Consensus 152 -----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~--~-----~~~~~~p~~~~ 219 (323)
T cd05571 152 -----MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELI--L-----MEEIRFPRTLS 219 (323)
T ss_pred -----ccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHH--H-----cCCCCCCCCCC
Confidence 12346999999999999999999999999999999999999999755432211110 0 01112344567
Q ss_pred HHHHHHHHHHhhhccCCCCC
Q 003384 703 EQLANLAMRCCEMSRKSRPE 722 (824)
Q Consensus 703 ~~l~~Li~~Cl~~~P~~RPt 722 (824)
..+.+|+.+||+.+|.+||+
T Consensus 220 ~~~~~li~~~L~~dP~~R~~ 239 (323)
T cd05571 220 PEAKSLLAGLLKKDPKQRLG 239 (323)
T ss_pred HHHHHHHHHHccCCHHHcCC
Confidence 78999999999999999994
No 38
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=3.2e-37 Score=346.28 Aligned_cols=257 Identities=24% Similarity=0.408 Sum_probs=199.9
Q ss_pred cCCCCccceeeecCceEEEEEEECC-------eEEEEEEecCCCCC-CchhHHHHHHHHHhc-CCCceeeEecccC--Cc
Q 003384 463 THNFDPSLKIGEGGYGSIYKGLLRH-------MQVAIKMLHPHSLQ-GPSEFQQEIDILSKI-RHPNLVTLVGACP--EV 531 (824)
Q Consensus 463 ~~~f~~~~~LG~G~fG~Vykg~~~~-------~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l-~HpnIv~L~g~~~--~~ 531 (824)
.++|...+.||+|+||.||+|...+ ..||||++...... ....+.+|+.+++.+ +||||++++|+|. ..
T Consensus 37 ~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~ 116 (374)
T cd05106 37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGP 116 (374)
T ss_pred HHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCC
Confidence 3468899999999999999987531 47999999754322 234688999999999 8999999999984 46
Q ss_pred eEEEEEecCCCChhhhhhccC-----------------------------------------------------------
Q 003384 532 WTLVYEYLPNGSLEDRLSCKD----------------------------------------------------------- 552 (824)
Q Consensus 532 ~~LV~Ey~~ggsL~~~L~~~~----------------------------------------------------------- 552 (824)
.++||||+++|+|.+++....
T Consensus 117 ~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (374)
T cd05106 117 VLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSD 196 (374)
T ss_pred eEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccccc
Confidence 889999999999999885321
Q ss_pred --------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccccCCCcc
Q 003384 553 --------NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTT 624 (824)
Q Consensus 553 --------~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~~~~~~ 624 (824)
...++++..+++|+.|++.||.|||+ +||+||||||+|||++.++.+||+|||+++.+.......
T Consensus 197 ~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~---~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~---- 269 (374)
T cd05106 197 SKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLAS---KNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYV---- 269 (374)
T ss_pred ccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHH---CCEEeccCchheEEEeCCCeEEEeeceeeeeccCCccee----
Confidence 11357889999999999999999999 899999999999999999999999999997654321110
Q ss_pred ccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHh-CCCCCCCchHHHHHHhhhccccccCCCCCCCChhhHH
Q 003384 625 LCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAE 703 (824)
Q Consensus 625 ~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELlt-G~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~ 703 (824)
......+++.|+|||++.+..++.++|||||||++|+|++ |++||............ ... ......+...+.
T Consensus 270 --~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~--~~~---~~~~~~~~~~~~ 342 (374)
T cd05106 270 --VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKM--VKR---GYQMSRPDFAPP 342 (374)
T ss_pred --eccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHH--HHc---ccCccCCCCCCH
Confidence 0122346778999999998899999999999999999997 99999654321111000 000 011122333467
Q ss_pred HHHHHHHHHhhhccCCCCChHHHHHHHHHHH
Q 003384 704 QLANLAMRCCEMSRKSRPELGKDVWRVLEPM 734 (824)
Q Consensus 704 ~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le~l 734 (824)
.+.+++.+||+.+|.+||++ .++++.|+.+
T Consensus 343 ~l~~li~~cl~~dp~~RPs~-~~l~~~l~~~ 372 (374)
T cd05106 343 EIYSIMKMCWNLEPTERPTF-SQISQLIQRQ 372 (374)
T ss_pred HHHHHHHHHcCCChhhCcCH-HHHHHHHHHH
Confidence 89999999999999999999 7788888765
No 39
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=2.6e-37 Score=337.88 Aligned_cols=231 Identities=23% Similarity=0.299 Sum_probs=187.9
Q ss_pred eeecCceEEEEEEEC--CeEEEEEEecCCC---CCCchhHHHHHHHHHhcCCCceeeEecccC--CceEEEEEecCCCCh
Q 003384 472 IGEGGYGSIYKGLLR--HMQVAIKMLHPHS---LQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYLPNGSL 544 (824)
Q Consensus 472 LG~G~fG~Vykg~~~--~~~VAvK~l~~~~---~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~Ey~~ggsL 544 (824)
||+|+||.||+|... +..||+|++.... ......+.+|+.++.+++||||++++++|. +..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 799999999999886 5789999986532 223456788999999999999999999884 468999999999999
Q ss_pred hhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccccCCCcc
Q 003384 545 EDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTT 624 (824)
Q Consensus 545 ~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~~~~~~ 624 (824)
.+++.. ...+++..+..++.|++.||.|||+ ++|+||||||+|||++.++.+||+|||+++........
T Consensus 81 ~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~----- 149 (312)
T cd05585 81 FHHLQR---EGRFDLSRARFYTAELLCALENLHK---FNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDK----- 149 (312)
T ss_pred HHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEeCCCCHHHeEECCCCcEEEEECcccccCccCCCc-----
Confidence 999853 3468999999999999999999999 89999999999999999999999999998754322110
Q ss_pred ccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCCCCChhhHHH
Q 003384 625 LCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQ 704 (824)
Q Consensus 625 ~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~ 704 (824)
.....||+.|+|||++.+..++.++|||||||++|+|+||++||........... ... ....+|...+..
T Consensus 150 ---~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~--~~~-----~~~~~~~~~~~~ 219 (312)
T cd05585 150 ---TNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRK--ILQ-----EPLRFPDGFDRD 219 (312)
T ss_pred ---cccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHH--HHc-----CCCCCCCcCCHH
Confidence 1234699999999999999999999999999999999999999975543221111 011 111234455678
Q ss_pred HHHHHHHHhhhccCCCCCh
Q 003384 705 LANLAMRCCEMSRKSRPEL 723 (824)
Q Consensus 705 l~~Li~~Cl~~~P~~RPt~ 723 (824)
+.+++.+||+.+|.+||++
T Consensus 220 ~~~li~~~L~~dp~~R~~~ 238 (312)
T cd05585 220 AKDLLIGLLSRDPTRRLGY 238 (312)
T ss_pred HHHHHHHHcCCCHHHcCCC
Confidence 9999999999999999975
No 40
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=2.6e-37 Score=322.14 Aligned_cols=245 Identities=27% Similarity=0.349 Sum_probs=196.2
Q ss_pred CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCC--chhHHHHHHHHHhcCCCceeeEe----cccCCceEEEE
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG--PSEFQQEIDILSKIRHPNLVTLV----GACPEVWTLVY 536 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~--~~~f~~Ei~iL~~l~HpnIv~L~----g~~~~~~~LV~ 536 (824)
.|+....|++|.||.||+|+++ +.-||+|+++...... +-.-.+||.+|.+++|||||.+- |.-.+..||||
T Consensus 77 efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~VM 156 (419)
T KOG0663|consen 77 EFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIVM 156 (419)
T ss_pred HHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeeeH
Confidence 5788889999999999999886 4779999998764322 23467999999999999999984 44467799999
Q ss_pred EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccc
Q 003384 537 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQN 616 (824)
Q Consensus 537 Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~ 616 (824)
|||+. +|..++... ..+|...+...+..|++.||+|||. +.|+||||||+|+|+...|.+||+|||||+.+...
T Consensus 157 e~~Eh-DLksl~d~m--~q~F~~~evK~L~~QlL~glk~lH~---~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp 230 (419)
T KOG0663|consen 157 EYVEH-DLKSLMETM--KQPFLPGEVKTLMLQLLRGLKHLHD---NWILHRDLKTSNLLLSHKGILKIADFGLAREYGSP 230 (419)
T ss_pred HHHHh-hHHHHHHhc--cCCCchHHHHHHHHHHHHHHHHHhh---ceeEecccchhheeeccCCcEEecccchhhhhcCC
Confidence 99986 788888533 3578899999999999999999999 89999999999999999999999999999987655
Q ss_pred cccCCCccccccCCCCCCcccCChhhhccC-CCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCC-
Q 003384 617 EISSNNTTLCCRTDPKGTFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLA- 694 (824)
Q Consensus 617 ~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~- 694 (824)
.. ..+..+-|.+|.|||.+.+. .|+.+.|+||+|||+.||++++|.|.+..++.+.... +..+..|..
T Consensus 231 ~k--------~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~I--f~llGtPte~ 300 (419)
T KOG0663|consen 231 LK--------PYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKI--FKLLGTPSEA 300 (419)
T ss_pred cc--------cCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHH--HHHhCCCccc
Confidence 21 12445679999999999875 6999999999999999999999999887765543221 111111111
Q ss_pred -------------------------CCCChh-hHHHHHHHHHHHhhhccCCCCChHH
Q 003384 695 -------------------------GDWPFV-QAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 695 -------------------------~~~p~~-~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
..++.. .++.-.+|+...|..||.+|.|+.+
T Consensus 301 iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~ 357 (419)
T KOG0663|consen 301 IWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAED 357 (419)
T ss_pred cCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHH
Confidence 111111 3467789999999999999999843
No 41
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-37 Score=369.35 Aligned_cols=257 Identities=29% Similarity=0.482 Sum_probs=210.6
Q ss_pred CCCccceeeecCceEEEEEEECC-------eEEEEEEecCC-CCCCchhHHHHHHHHHhcCCCceeeEecccCC--ceEE
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLRH-------MQVAIKMLHPH-SLQGPSEFQQEIDILSKIRHPNLVTLVGACPE--VWTL 534 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~~-------~~VAvK~l~~~-~~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~~--~~~L 534 (824)
+......||+|+||.||.|.+.+ ..||||.+... +.+...+|.+|..+|++++|||||+|+|+|.+ ..+|
T Consensus 693 ~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~i 772 (1025)
T KOG1095|consen 693 NVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPLI 772 (1025)
T ss_pred heEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcEE
Confidence 44566789999999999998763 24999998765 34456789999999999999999999999943 5789
Q ss_pred EEEecCCCChhhhhhccC----CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccc
Q 003384 535 VYEYLPNGSLEDRLSCKD----NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGIS 610 (824)
Q Consensus 535 V~Ey~~ggsL~~~L~~~~----~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla 610 (824)
++|||.||+|..+|.... ....|+....+.++.+||+|+.||+. +++|||||...|+||+....+||+|||||
T Consensus 773 ~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~---~~fvHRDLAaRNCLL~~~r~VKIaDFGlA 849 (1025)
T KOG1095|consen 773 LLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLES---KHFVHRDLAARNCLLDERRVVKIADFGLA 849 (1025)
T ss_pred EehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHh---CCCcCcchhhhheeecccCcEEEcccchh
Confidence 999999999999996542 14568999999999999999999999 88999999999999999999999999999
Q ss_pred cccccccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHh-CCCCCCCchHHHHHH---hhhcc
Q 003384 611 RFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYAL---DTGKL 686 (824)
Q Consensus 611 ~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELlt-G~~Pf~~~~~~~~~~---~~~~~ 686 (824)
+.+...+..... ....-...|||||.+..+.++.|+|||||||+|||++| |..||+..+..+... ..|
T Consensus 850 rDiy~~~yyr~~------~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~gg-- 921 (1025)
T KOG1095|consen 850 RDIYDKDYYRKH------GEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEGG-- 921 (1025)
T ss_pred Hhhhhchheecc------CccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhCC--
Confidence 955544432211 11233568999999999999999999999999999999 999998776544322 222
Q ss_pred ccccCCCCCCCChhhHHHHHHHHHHHhhhccCCCCChHHHHHHHHHHHHhhCCC
Q 003384 687 KNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRASCGG 740 (824)
Q Consensus 687 ~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le~l~~~~~~ 740 (824)
..+.|..++..+.+++.+||+.+|++||++ ..+++.+..+......
T Consensus 922 -------RL~~P~~CP~~ly~lM~~CW~~~pe~RP~F-~~i~~q~~~i~~~~~~ 967 (1025)
T KOG1095|consen 922 -------RLDPPSYCPEKLYQLMLQCWKHDPEDRPSF-RTIVEQDPAISNAALG 967 (1025)
T ss_pred -------ccCCCCCCChHHHHHHHHHccCChhhCccH-HHHHhhhhhhhhhhcc
Confidence 234577888999999999999999999999 5666777776655433
No 42
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=2.5e-37 Score=328.87 Aligned_cols=244 Identities=40% Similarity=0.655 Sum_probs=189.1
Q ss_pred cceeeecCceEEEEEEEC------CeEEEEEEecCCCCC-CchhHHHHHHHHHhcCCCceeeEecccC--CceEEEEEec
Q 003384 469 SLKIGEGGYGSIYKGLLR------HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYL 539 (824)
Q Consensus 469 ~~~LG~G~fG~Vykg~~~------~~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~Ey~ 539 (824)
.+.||.|.||.||+|.+. +..|+||+++..... ..+.|.+|++++++++||||++++|+|. +..++||||+
T Consensus 4 ~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~~ 83 (259)
T PF07714_consen 4 IKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEYC 83 (259)
T ss_dssp EEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE--
T ss_pred eeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccccccccccccccc
Confidence 467999999999999988 478999999653222 2467999999999999999999999984 4588999999
Q ss_pred CCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccccccc
Q 003384 540 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEIS 619 (824)
Q Consensus 540 ~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~ 619 (824)
++|+|.++|... ....+++..+..|+.|++.||.|||+ ++++|+||+++|||++.++.+||+|||++.........
T Consensus 84 ~~g~L~~~L~~~-~~~~~~~~~~~~i~~~i~~~l~~Lh~---~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~ 159 (259)
T PF07714_consen 84 PGGSLDDYLKSK-NKEPLSEQQRLSIAIQIAEALSYLHS---NNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKY 159 (259)
T ss_dssp TTEBHHHHHHHT-CTTTSBHHHHHHHHHHHHHHHHHHHH---TTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSE
T ss_pred cccccccccccc-cccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccccccc
Confidence 999999999654 24568999999999999999999999 78999999999999999999999999999876322111
Q ss_pred CCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHh-CCCCCCCchHHH--HHHhhhccccccCCCCCC
Q 003384 620 SNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQ--YALDTGKLKNLLDPLAGD 696 (824)
Q Consensus 620 ~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELlt-G~~Pf~~~~~~~--~~~~~~~~~~~ld~~~~~ 696 (824)
.......+...|+|||.+.+..++.++||||||+++|||+| |+.||....... ..+..+. ...
T Consensus 160 ------~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~~~--------~~~ 225 (259)
T PF07714_consen 160 ------KNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQGQ--------RLP 225 (259)
T ss_dssp ------EESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHTTE--------ETT
T ss_pred ------ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc--------cce
Confidence 11123346789999999999999999999999999999999 789986553322 1112211 122
Q ss_pred CChhhHHHHHHHHHHHhhhccCCCCChHHHHHHHH
Q 003384 697 WPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVL 731 (824)
Q Consensus 697 ~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~L 731 (824)
.+...+..+.+++.+||..+|.+||++ +++++.|
T Consensus 226 ~~~~~~~~~~~li~~C~~~~p~~RPs~-~~i~~~L 259 (259)
T PF07714_consen 226 IPDNCPKDIYSLIQQCWSHDPEKRPSF-QEILQEL 259 (259)
T ss_dssp SBTTSBHHHHHHHHHHT-SSGGGS--H-HHHHHHH
T ss_pred eccchhHHHHHHHHHHcCCChhhCcCH-HHHHhcC
Confidence 334456789999999999999999999 5665544
No 43
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=9.9e-37 Score=327.82 Aligned_cols=247 Identities=26% Similarity=0.324 Sum_probs=192.3
Q ss_pred CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC--CCchhHHHHHHHHHhcCCCceeeEecccC--CceEEEEEe
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEY 538 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~--~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~Ey 538 (824)
+|...+.||+|+||.||+|... +..||||++..... .....+.+|+.+++.++||||++++++|. +..++||||
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (287)
T cd07848 2 KFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFEY 81 (287)
T ss_pred CceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEec
Confidence 6888899999999999999986 47899999875422 22456889999999999999999999884 468899999
Q ss_pred cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccc
Q 003384 539 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEI 618 (824)
Q Consensus 539 ~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~ 618 (824)
+++++|..+.. ....+++..+..++.|++.||.|||. .+|+||||||+|||++.++.+||+|||++........
T Consensus 82 ~~~~~l~~~~~---~~~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 155 (287)
T cd07848 82 VEKNMLELLEE---MPNGVPPEKVRSYIYQLIKAIHWCHK---NDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSN 155 (287)
T ss_pred CCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCcEEEeeccCccccccccc
Confidence 99887765542 23468899999999999999999999 8999999999999999999999999999987543221
Q ss_pred cCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhcc------------
Q 003384 619 SSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKL------------ 686 (824)
Q Consensus 619 ~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~------------ 686 (824)
.. .....||+.|+|||++.+..++.++|||||||++|+|++|++||...............
T Consensus 156 ~~-------~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (287)
T cd07848 156 AN-------YTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLF 228 (287)
T ss_pred cc-------ccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhh
Confidence 10 12345899999999999889999999999999999999999999765432221111000
Q ss_pred ------ccccCCCC-------CCCChhhHHHHHHHHHHHhhhccCCCCChH
Q 003384 687 ------KNLLDPLA-------GDWPFVQAEQLANLAMRCCEMSRKSRPELG 724 (824)
Q Consensus 687 ------~~~ld~~~-------~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~ 724 (824)
.....+.. ..+....+..+.+|+.+||+.+|.+||++.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~ 279 (287)
T cd07848 229 YSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTE 279 (287)
T ss_pred hccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHH
Confidence 00000000 001112456799999999999999999984
No 44
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.5e-37 Score=345.56 Aligned_cols=238 Identities=26% Similarity=0.417 Sum_probs=200.7
Q ss_pred CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC---CCchhHHHHHHHHHhcCCCceeeEecccCC--ceEEEEE
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEIDILSKIRHPNLVTLVGACPE--VWTLVYE 537 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~---~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~~--~~~LV~E 537 (824)
-|..++.||.|+-|.|..|++. |+.+|||++..... .....+.+|+-||+.+.||||++||+.+.+ .+|||.|
T Consensus 13 pwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlE 92 (786)
T KOG0588|consen 13 PWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLE 92 (786)
T ss_pred ceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEE
Confidence 4777888999999999999874 78999999976532 224568899999999999999999999954 6899999
Q ss_pred ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccccc
Q 003384 538 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNE 617 (824)
Q Consensus 538 y~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~ 617 (824)
|++||.|.++|. ..++|+....++++.||..|+.|+|. .+|+||||||+|+|||..+.+||+|||+|.+-..+.
T Consensus 93 yv~gGELFdylv---~kG~l~e~eaa~ff~QIi~gv~yCH~---~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gk 166 (786)
T KOG0588|consen 93 YVPGGELFDYLV---RKGPLPEREAAHFFRQILDGVSYCHA---FNICHRDLKPENLLLDVKNNIKIADFGMASLEVPGK 166 (786)
T ss_pred ecCCchhHHHHH---hhCCCCCHHHHHHHHHHHHHHHHHhh---hcceeccCCchhhhhhcccCEeeeccceeecccCCc
Confidence 999999999995 44679999999999999999999999 789999999999999999999999999998765543
Q ss_pred ccCCCccccccCCCCCCcccCChhhhccCCCC-cchhHHhHHHHHHHHHhCCCCCCCchHHH--HHHhhhccccccCCCC
Q 003384 618 ISSNNTTLCCRTDPKGTFAYMDPEFLASGELT-PKSDVYSFGIILLRLLTGRPALGITKEVQ--YALDTGKLKNLLDPLA 694 (824)
Q Consensus 618 ~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t-~ksDVwSlGvvL~ELltG~~Pf~~~~~~~--~~~~~~~~~~~ld~~~ 694 (824)
.- .+.+|+|.|.|||++.+.+|+ .++||||+|||||.||||+.||+.++--. .-+..|.+
T Consensus 167 lL---------eTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f-------- 229 (786)
T KOG0588|consen 167 LL---------ETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVF-------- 229 (786)
T ss_pred cc---------cccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCcc--------
Confidence 21 334599999999999999885 68999999999999999999998554221 11222322
Q ss_pred CCCChhhHHHHHHHHHHHhhhccCCCCChHHHH
Q 003384 695 GDWPFVQAEQLANLAMRCCEMSRKSRPELGKDV 727 (824)
Q Consensus 695 ~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v 727 (824)
+.|...+.+.++|+.+|+..||..|.|+ ++|
T Consensus 230 -~MPs~Is~eaQdLLr~ml~VDp~~RiT~-~eI 260 (786)
T KOG0588|consen 230 -EMPSNISSEAQDLLRRMLDVDPSTRITT-EEI 260 (786)
T ss_pred -cCCCcCCHHHHHHHHHHhccCccccccH-HHH
Confidence 3467778899999999999999999999 444
No 45
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=4.2e-37 Score=340.92 Aligned_cols=234 Identities=23% Similarity=0.324 Sum_probs=191.8
Q ss_pred CCCCccceeeecCceEEEEEEECC---eEEEEEEecCCC---CCCchhHHHHHHHHHhcCCCceeeEecccC--CceEEE
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLLRH---MQVAIKMLHPHS---LQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLV 535 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~~~---~~VAvK~l~~~~---~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV 535 (824)
.+|...+.||+|+||.||+|.+.+ ..||+|++.... ......+.+|+.+++.++||||+++++++. ...++|
T Consensus 30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 109 (340)
T PTZ00426 30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLV 109 (340)
T ss_pred hhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEE
Confidence 368888999999999999998653 579999986432 223456889999999999999999999984 458899
Q ss_pred EEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccc
Q 003384 536 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQ 615 (824)
Q Consensus 536 ~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~ 615 (824)
|||+++|+|.+++.. ...+++..+..++.|++.||.|||+ ++|+||||||+|||++.++.+||+|||++.....
T Consensus 110 ~Ey~~~g~L~~~i~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~ 183 (340)
T PTZ00426 110 LEFVIGGEFFTFLRR---NKRFPNDVGCFYAAQIVLIFEYLQS---LNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDT 183 (340)
T ss_pred EeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEccCCCHHHEEECCCCCEEEecCCCCeecCC
Confidence 999999999999853 3468899999999999999999999 8999999999999999999999999999986532
Q ss_pred ccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCC
Q 003384 616 NEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAG 695 (824)
Q Consensus 616 ~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~ 695 (824)
.. ....||+.|+|||++.+..++.++|||||||++|||+||.+||............. .. ..
T Consensus 184 ~~-----------~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~--~~-----~~ 245 (340)
T PTZ00426 184 RT-----------YTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKIL--EG-----II 245 (340)
T ss_pred Cc-----------ceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHh--cC-----CC
Confidence 11 23458999999999999889999999999999999999999997655432111110 00 11
Q ss_pred CCChhhHHHHHHHHHHHhhhccCCCC
Q 003384 696 DWPFVQAEQLANLAMRCCEMSRKSRP 721 (824)
Q Consensus 696 ~~p~~~~~~l~~Li~~Cl~~~P~~RP 721 (824)
.+|...+..+.+++.+|++.+|.+|+
T Consensus 246 ~~p~~~~~~~~~li~~~l~~dp~~R~ 271 (340)
T PTZ00426 246 YFPKFLDNNCKHLMKKLLSHDLTKRY 271 (340)
T ss_pred CCCCCCCHHHHHHHHHHcccCHHHcC
Confidence 23444566889999999999999996
No 46
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=7.9e-37 Score=353.88 Aligned_cols=248 Identities=20% Similarity=0.242 Sum_probs=198.5
Q ss_pred CCCccceeeecCceEEEEEEEC---CeEEEEEEecCCCCCCchhHHHHHHHHHhcCCCceeeEeccc--CCceEEEEEec
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR---HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYL 539 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~---~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~--~~~~~LV~Ey~ 539 (824)
.|...+.||+|+||.||+|... +..||+|.+..........+.+|+.+|+.++|||||+++++| .+..+|||||+
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~ 147 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYG 147 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECC
Confidence 4888899999999999999764 457888877554433344678899999999999999999988 45789999999
Q ss_pred CCCChhhhhhcc-CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccc
Q 003384 540 PNGSLEDRLSCK-DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEI 618 (824)
Q Consensus 540 ~ggsL~~~L~~~-~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~ 618 (824)
+||+|.++|... ....++++..+..++.|++.||.|||+ ++|+||||||+||||+.++.+||+|||+++.+.....
T Consensus 148 ~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~---~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~ 224 (478)
T PTZ00267 148 SGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHS---RKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVS 224 (478)
T ss_pred CCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHh---CCEEECCcCHHhEEECCCCcEEEEeCcCceecCCccc
Confidence 999999988532 334578999999999999999999999 8999999999999999999999999999987643221
Q ss_pred cCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCCCCC
Q 003384 619 SSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWP 698 (824)
Q Consensus 619 ~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p 698 (824)
.. ......||+.|+|||++.+..++.++|||||||++|+|+||++||........... .+.......|
T Consensus 225 ~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~------~~~~~~~~~~ 292 (478)
T PTZ00267 225 LD------VASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQ------VLYGKYDPFP 292 (478)
T ss_pred cc------cccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH------HHhCCCCCCC
Confidence 10 11345699999999999999999999999999999999999999976543221111 1111111233
Q ss_pred hhhHHHHHHHHHHHhhhccCCCCChHHHH
Q 003384 699 FVQAEQLANLAMRCCEMSRKSRPELGKDV 727 (824)
Q Consensus 699 ~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v 727 (824)
...+..+.+++.+||+.+|.+||++.+.+
T Consensus 293 ~~~s~~~~~li~~~L~~dP~~Rps~~~~l 321 (478)
T PTZ00267 293 CPVSSGMKALLDPLLSKNPALRPTTQQLL 321 (478)
T ss_pred ccCCHHHHHHHHHHhccChhhCcCHHHHH
Confidence 44567899999999999999999985544
No 47
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=9.8e-37 Score=326.90 Aligned_cols=250 Identities=28% Similarity=0.479 Sum_probs=199.2
Q ss_pred CCCccceeeecCceEEEEEEECC-------eEEEEEEecCCCCC-CchhHHHHHHHHHhcCCCceeeEecccC--CceEE
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLRH-------MQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTL 534 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~~-------~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~L 534 (824)
+|...+.||+|+||.||+|...+ ..||+|.+...... ....|.+|+.++..++||||+++++++. ...++
T Consensus 6 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 85 (283)
T cd05048 6 AVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTCM 85 (283)
T ss_pred HcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceEE
Confidence 57778899999999999998643 46999998754322 2346889999999999999999999884 45789
Q ss_pred EEEecCCCChhhhhhccCC-------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCc
Q 003384 535 VYEYLPNGSLEDRLSCKDN-------------SPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFV 601 (824)
Q Consensus 535 V~Ey~~ggsL~~~L~~~~~-------------~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~ 601 (824)
+|||+++|+|.+++..... ...+++..++.++.+++.||.|||. ++++||||||+|||++.++.
T Consensus 86 ~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~---~~i~H~dlkp~Nil~~~~~~ 162 (283)
T cd05048 86 LFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSS---HHFVHRDLAARNCLVGEGLT 162 (283)
T ss_pred EEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccccccceEEEcCCCc
Confidence 9999999999999854311 1458889999999999999999999 89999999999999999999
Q ss_pred ceeeccccccccccccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHh-CCCCCCCchHHH--
Q 003384 602 SKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQ-- 678 (824)
Q Consensus 602 vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELlt-G~~Pf~~~~~~~-- 678 (824)
+||+|||+++......... ......+++.|+|||.+.+..++.++|||||||++|||+| |..||.......
T Consensus 163 ~~L~dfg~~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~ 236 (283)
T cd05048 163 VKISDFGLSRDIYSADYYR------VQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVI 236 (283)
T ss_pred EEECCCcceeecccccccc------ccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHH
Confidence 9999999998654322111 1123457889999999998899999999999999999998 999986543321
Q ss_pred HHHhhhccccccCCCCCCCChhhHHHHHHHHHHHhhhccCCCCChHHHHHHHHH
Q 003384 679 YALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLE 732 (824)
Q Consensus 679 ~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le 732 (824)
..+..+ .....+...+..+.+|+.+||+.+|.+||++ +++.+.|+
T Consensus 237 ~~i~~~--------~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~-~~i~~~l~ 281 (283)
T cd05048 237 EMIRSR--------QLLPCPEDCPARVYALMIECWNEIPARRPRF-KDIHTRLR 281 (283)
T ss_pred HHHHcC--------CcCCCcccCCHHHHHHHHHHccCChhhCcCH-HHHHHHHh
Confidence 111111 1122345567899999999999999999999 67777665
No 48
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=1.8e-36 Score=320.87 Aligned_cols=242 Identities=25% Similarity=0.443 Sum_probs=193.6
Q ss_pred eeeecCceEEEEEEEC----CeEEEEEEecCCCCC--CchhHHHHHHHHHhcCCCceeeEecccC-CceEEEEEecCCCC
Q 003384 471 KIGEGGYGSIYKGLLR----HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPNLVTLVGACP-EVWTLVYEYLPNGS 543 (824)
Q Consensus 471 ~LG~G~fG~Vykg~~~----~~~VAvK~l~~~~~~--~~~~f~~Ei~iL~~l~HpnIv~L~g~~~-~~~~LV~Ey~~ggs 543 (824)
.||+|+||.||+|.+. +..||+|++...... ..+.+.+|+.+++.++||||++++|++. +.+++||||+++|+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~lv~e~~~~~~ 81 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEAESWMLVMELAELGP 81 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCcEEEEecCCCCc
Confidence 5899999999999763 477999998654322 2356889999999999999999999884 46789999999999
Q ss_pred hhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccccCCCc
Q 003384 544 LEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNT 623 (824)
Q Consensus 544 L~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~~~~~ 623 (824)
|.+++.. ...+++..+..++.|++.||.|||. ++|+||||||.|||++.++.+||+|||++............
T Consensus 82 L~~~l~~---~~~~~~~~~~~i~~qi~~al~~lH~---~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~- 154 (257)
T cd05116 82 LNKFLQK---NKHVTEKNITELVHQVSMGMKYLEE---TNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKA- 154 (257)
T ss_pred HHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeee-
Confidence 9999843 3468899999999999999999999 89999999999999999999999999999866433211110
Q ss_pred cccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHh-CCCCCCCchHHH--HHHhhhccccccCCCCCCCChh
Q 003384 624 TLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQ--YALDTGKLKNLLDPLAGDWPFV 700 (824)
Q Consensus 624 ~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELlt-G~~Pf~~~~~~~--~~~~~~~~~~~ld~~~~~~p~~ 700 (824)
.....++..|+|||.+....++.++|||||||++|||+| |++||....... ..+..+ .....|..
T Consensus 155 ----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~--------~~~~~~~~ 222 (257)
T cd05116 155 ----KTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESG--------ERMECPQR 222 (257)
T ss_pred ----cCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCC--------CCCCCCCC
Confidence 122345689999999988889999999999999999998 999997543321 111111 11223445
Q ss_pred hHHHHHHHHHHHhhhccCCCCChHHHHHHHHH
Q 003384 701 QAEQLANLAMRCCEMSRKSRPELGKDVWRVLE 732 (824)
Q Consensus 701 ~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le 732 (824)
.+..+.+++.+||+.+|.+||++ ..|...|+
T Consensus 223 ~~~~l~~li~~~~~~~p~~Rp~~-~~i~~~l~ 253 (257)
T cd05116 223 CPPEMYDLMKLCWTYGVDERPGF-AVVELRLR 253 (257)
T ss_pred CCHHHHHHHHHHhccCchhCcCH-HHHHHHHh
Confidence 67789999999999999999999 66766665
No 49
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=1.4e-36 Score=334.27 Aligned_cols=249 Identities=25% Similarity=0.353 Sum_probs=189.0
Q ss_pred CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCC--CCCchhHHHHHHHHHhcCCCceeeEecccC-------CceE
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS--LQGPSEFQQEIDILSKIRHPNLVTLVGACP-------EVWT 533 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~--~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~-------~~~~ 533 (824)
+|...++||+|+||.||+|... +..||||++.... ......+.+|+.+++.++||||+++++++. ...+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 4778889999999999999875 5789999987432 223346889999999999999999999862 1368
Q ss_pred EEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccc
Q 003384 534 LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFL 613 (824)
Q Consensus 534 LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~ 613 (824)
+||||+. ++|.+++. ....+++..+..++.|++.||.|||+ ++|+||||||+|||++.++.+||+|||+++..
T Consensus 81 lv~e~~~-~~L~~~l~---~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~ 153 (338)
T cd07859 81 VVFELME-SDLHQVIK---ANDDLTPEHHQFFLYQLLRALKYIHT---ANVFHRDLKPKNILANADCKLKICDFGLARVA 153 (338)
T ss_pred EEEecCC-CCHHHHHH---hcccCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCcEEEccCcccccc
Confidence 9999995 68988884 33468999999999999999999999 89999999999999999999999999999864
Q ss_pred ccccccCCCccccccCCCCCCcccCChhhhcc--CCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHH----------
Q 003384 614 SQNEISSNNTTLCCRTDPKGTFAYMDPEFLAS--GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYAL---------- 681 (824)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~--~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~---------- 681 (824)
....... .......||+.|+|||++.+ ..++.++|||||||++|+|+||++||..........
T Consensus 154 ~~~~~~~-----~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~ 228 (338)
T cd07859 154 FNDTPTA-----IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPS 228 (338)
T ss_pred ccccCcc-----ccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCC
Confidence 3322111 01134569999999999876 678999999999999999999999996543221100
Q ss_pred -------hhhccccccC----CCCC---CCChhhHHHHHHHHHHHhhhccCCCCChHH
Q 003384 682 -------DTGKLKNLLD----PLAG---DWPFVQAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 682 -------~~~~~~~~ld----~~~~---~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
........+. .... ......+..+.+++.+||+.+|.+||++.+
T Consensus 229 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e 286 (338)
T cd07859 229 PETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEE 286 (338)
T ss_pred HHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHH
Confidence 0000000000 0000 000123457889999999999999999843
No 50
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=5.3e-37 Score=337.34 Aligned_cols=231 Identities=23% Similarity=0.284 Sum_probs=186.6
Q ss_pred ceeeecCceEEEEEEEC--CeEEEEEEecCCCC---CCchhHHHHHHHHHhcCCCceeeEecccC--CceEEEEEecCCC
Q 003384 470 LKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYLPNG 542 (824)
Q Consensus 470 ~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~---~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~Ey~~gg 542 (824)
+.||+|+||.||++... +..||+|++..... .....+.+|+.+++.++||||++++++|. +..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 36999999999999875 57899999875422 22345778999999999999999999874 5689999999999
Q ss_pred ChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccccCCC
Q 003384 543 SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNN 622 (824)
Q Consensus 543 sL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~~~~ 622 (824)
+|.+++.. ...+++..+..++.|++.||.|||+ +||+||||||+|||++.++.+||+|||++.........
T Consensus 81 ~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~--- 151 (323)
T cd05595 81 ELFFHLSR---ERVFTEERARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--- 151 (323)
T ss_pred cHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHEEEcCCCCEEecccHHhccccCCCCc---
Confidence 99988843 3468999999999999999999999 89999999999999999999999999998753222110
Q ss_pred ccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCCCCChhhH
Q 003384 623 TTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQA 702 (824)
Q Consensus 623 ~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~ 702 (824)
.....||+.|+|||++.+..++.++|||||||++|+|++|+.||............ . .....+|...+
T Consensus 152 -----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~--~-----~~~~~~p~~~~ 219 (323)
T cd05595 152 -----MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELI--L-----MEEIRFPRTLS 219 (323)
T ss_pred -----cccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHH--h-----cCCCCCCCCCC
Confidence 12346899999999999999999999999999999999999999654432211110 0 01112344566
Q ss_pred HHHHHHHHHHhhhccCCCC
Q 003384 703 EQLANLAMRCCEMSRKSRP 721 (824)
Q Consensus 703 ~~l~~Li~~Cl~~~P~~RP 721 (824)
..+.+++.+||+.+|.+||
T Consensus 220 ~~~~~li~~~L~~dP~~R~ 238 (323)
T cd05595 220 PEAKSLLAGLLKKDPKQRL 238 (323)
T ss_pred HHHHHHHHHHccCCHHHhC
Confidence 7899999999999999998
No 51
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=1.9e-36 Score=320.19 Aligned_cols=247 Identities=25% Similarity=0.456 Sum_probs=196.6
Q ss_pred CCCccceeeecCceEEEEEEECC-eEEEEEEecCCCCCCchhHHHHHHHHHhcCCCceeeEecccC--CceEEEEEecCC
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLRH-MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYLPN 541 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~~-~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~Ey~~g 541 (824)
.|+..+.||+|+||.||+|.+.. ..+|+|.+.... .....|.+|+.+|++++||||++++++|. +..++||||+++
T Consensus 5 ~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~ 83 (256)
T cd05114 5 ELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGA-MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFMEN 83 (256)
T ss_pred HcEEeeEecCCcCceEEEEEeccCceEEEEecccCC-ccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCCC
Confidence 47778899999999999998865 579999876432 33567899999999999999999999884 468899999999
Q ss_pred CChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccccCC
Q 003384 542 GSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSN 621 (824)
Q Consensus 542 gsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~~~ 621 (824)
|+|.+++... ...+++..+..++.+++.||.|||+ ++|+||||||+||+++.++.+||+|||+++.........
T Consensus 84 ~~L~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~- 157 (256)
T cd05114 84 GCLLNYLRQR--QGKLSKDMLLSMCQDVCEGMEYLER---NSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTS- 157 (256)
T ss_pred CcHHHHHHhC--ccCCCHHHHHHHHHHHHHHHHHHHH---CCccccccCcceEEEcCCCeEEECCCCCccccCCCceec-
Confidence 9999988533 2358899999999999999999999 899999999999999999999999999988654322111
Q ss_pred CccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHh-CCCCCCCchHHHHHHhhhccccccCCCCCCCChh
Q 003384 622 NTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWPFV 700 (824)
Q Consensus 622 ~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELlt-G~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~ 700 (824)
.....++..|+|||++.+..++.++||||||+++|+|++ |++||................ ....|..
T Consensus 158 ------~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~------~~~~~~~ 225 (256)
T cd05114 158 ------SSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGF------RLYRPKL 225 (256)
T ss_pred ------cCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCC------CCCCCCC
Confidence 122346678999999988889999999999999999999 999997654332211111110 1112333
Q ss_pred hHHHHHHHHHHHhhhccCCCCChHHHHHHHH
Q 003384 701 QAEQLANLAMRCCEMSRKSRPELGKDVWRVL 731 (824)
Q Consensus 701 ~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~L 731 (824)
.+..+.+++.+||+.+|.+||++ +++++.|
T Consensus 226 ~~~~~~~li~~c~~~~p~~Rps~-~~l~~~l 255 (256)
T cd05114 226 ASMTVYEVMYSCWHEKPEGRPTF-AELLRAI 255 (256)
T ss_pred CCHHHHHHHHHHccCCcccCcCH-HHHHHhh
Confidence 45689999999999999999999 5555543
No 52
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=2.6e-36 Score=325.10 Aligned_cols=247 Identities=27% Similarity=0.378 Sum_probs=189.2
Q ss_pred CCCccceeeecCceEEEEEEEC---CeEEEEEEecCCCCC--CchhHHHHHHHHHhc---CCCceeeEecccC-------
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR---HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKI---RHPNLVTLVGACP------- 529 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~---~~~VAvK~l~~~~~~--~~~~f~~Ei~iL~~l---~HpnIv~L~g~~~------- 529 (824)
+|...+.||+|+||.||+|... +..||||++...... ....+.+|+.+++.+ +||||++++++|.
T Consensus 2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~ 81 (290)
T cd07862 2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE 81 (290)
T ss_pred CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCC
Confidence 6888899999999999999873 467999998754322 234567788888776 6999999999872
Q ss_pred CceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccc
Q 003384 530 EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGI 609 (824)
Q Consensus 530 ~~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGl 609 (824)
...++||||+. ++|.+++.... ...+++..+..++.|++.||.|||+ ++|+||||||+|||++.++.+||+|||+
T Consensus 82 ~~~~lv~e~~~-~~l~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~lH~---~~iiH~dlkp~Nil~~~~~~~kl~Dfg~ 156 (290)
T cd07862 82 TKLTLVFEHVD-QDLTTYLDKVP-EPGVPTETIKDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGL 156 (290)
T ss_pred CcEEEEEccCC-CCHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEEcCCCCEEEccccc
Confidence 34789999996 58988885432 3458999999999999999999999 8999999999999999999999999999
Q ss_pred ccccccccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhcccc-
Q 003384 610 SRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKN- 688 (824)
Q Consensus 610 a~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~- 688 (824)
++...... ......||+.|+|||++.+..++.++|||||||++|||++|++||............-....
T Consensus 157 ~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~ 227 (290)
T cd07862 157 ARIYSFQM---------ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGL 227 (290)
T ss_pred eEeccCCc---------ccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCC
Confidence 97654321 01334589999999999988999999999999999999999999976544322111100000
Q ss_pred ---------------ccCCCCC----CCChhhHHHHHHHHHHHhhhccCCCCChHH
Q 003384 689 ---------------LLDPLAG----DWPFVQAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 689 ---------------~ld~~~~----~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
.+.+... ......+..+.+|+.+||+.+|++||++.+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~ 283 (290)
T cd07862 228 PGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYS 283 (290)
T ss_pred CChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHH
Confidence 0000000 001123567889999999999999999843
No 53
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=1.6e-36 Score=321.45 Aligned_cols=249 Identities=26% Similarity=0.468 Sum_probs=200.3
Q ss_pred CCCCccceeeecCceEEEEEEECC-eEEEEEEecCCCCCCchhHHHHHHHHHhcCCCceeeEecccC--CceEEEEEecC
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLLRH-MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYLP 540 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~~~-~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~Ey~~ 540 (824)
++|...++||+|+||.||+|...+ ..||+|.+.... ...+.+.+|+.+++.++||||+++++++. +..++||||++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 84 (261)
T cd05072 6 ESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMA 84 (261)
T ss_pred HHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCc-hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecCC
Confidence 368888999999999999998764 679999886533 23567899999999999999999998874 46789999999
Q ss_pred CCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccccC
Q 003384 541 NGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISS 620 (824)
Q Consensus 541 ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~~ 620 (824)
+|+|.+++... ....+++..+..++.+++.||.|||+ ++++||||||+|||++.++.+||+|||++..........
T Consensus 85 ~~~L~~~l~~~-~~~~~~~~~~~~~~~~l~~~l~~LH~---~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~ 160 (261)
T cd05072 85 KGSLLDFLKSD-EGGKVLLPKLIDFSAQIAEGMAYIER---KNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTA 160 (261)
T ss_pred CCcHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccchhhEEecCCCcEEECCCccceecCCCceec
Confidence 99999998543 23568889999999999999999999 889999999999999999999999999998754322111
Q ss_pred CCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHh-CCCCCCCchHHH--HHHhhhccccccCCCCCCC
Q 003384 621 NNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQ--YALDTGKLKNLLDPLAGDW 697 (824)
Q Consensus 621 ~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELlt-G~~Pf~~~~~~~--~~~~~~~~~~~ld~~~~~~ 697 (824)
.....++..|+|||++.+..++.++|||||||++|+|+| |+.||....... ..+..+ .. ...
T Consensus 161 -------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~----~~----~~~ 225 (261)
T cd05072 161 -------REGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRG----YR----MPR 225 (261)
T ss_pred -------cCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcC----CC----CCC
Confidence 122346788999999988889999999999999999998 999996543322 111111 11 111
Q ss_pred ChhhHHHHHHHHHHHhhhccCCCCChHHHHHHHHHH
Q 003384 698 PFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEP 733 (824)
Q Consensus 698 p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le~ 733 (824)
+...+..+.+++.+|++.+|++||++ +++.+.|+.
T Consensus 226 ~~~~~~~~~~li~~~l~~~p~~Rp~~-~~i~~~l~~ 260 (261)
T cd05072 226 MENCPDELYDIMKTCWKEKAEERPTF-DYLQSVLDD 260 (261)
T ss_pred CCCCCHHHHHHHHHHccCCcccCcCH-HHHHHHHhc
Confidence 22345689999999999999999999 778787764
No 54
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.8e-38 Score=337.24 Aligned_cols=240 Identities=27% Similarity=0.376 Sum_probs=198.3
Q ss_pred CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCC-CchhHHHHHHHHHhcCCCceeeEeccc--CCceEEEEEec
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYL 539 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIv~L~g~~--~~~~~LV~Ey~ 539 (824)
.|.....||+|.||.||+|.+. ++.||||++...... ..+.+++|+.+|.+++++||.++||++ .....++||||
T Consensus 14 ~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~ 93 (467)
T KOG0201|consen 14 LYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYC 93 (467)
T ss_pred ccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHh
Confidence 4666678999999999999986 478999999876443 357899999999999999999999987 45677999999
Q ss_pred CCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccccccc
Q 003384 540 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEIS 619 (824)
Q Consensus 540 ~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~ 619 (824)
.||++.+.|. ....+.+..+.-|..++..||.|||. ++.+|||||+.||||..+|.+||+|||++..+.....
T Consensus 94 ~gGsv~~lL~---~~~~~~E~~i~~ilre~l~~l~ylH~---~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~- 166 (467)
T KOG0201|consen 94 GGGSVLDLLK---SGNILDEFEIAVILREVLKGLDYLHS---EKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVK- 166 (467)
T ss_pred cCcchhhhhc---cCCCCccceeeeehHHHHHHhhhhhh---cceecccccccceeEeccCcEEEEecceeeeeechhh-
Confidence 9999999993 44455778888899999999999999 8899999999999999999999999999986654321
Q ss_pred CCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccC-CCCCCCC
Q 003384 620 SNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLD-PLAGDWP 698 (824)
Q Consensus 620 ~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld-~~~~~~p 698 (824)
.+.+.+||+.|||||++....|+.++||||||++.+||++|.||+.....+ +...++. ...+...
T Consensus 167 -------rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPm-------rvlflIpk~~PP~L~ 232 (467)
T KOG0201|consen 167 -------RRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPM-------RVLFLIPKSAPPRLD 232 (467)
T ss_pred -------ccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcc-------eEEEeccCCCCCccc
Confidence 225678999999999999889999999999999999999999999654432 1111121 1222223
Q ss_pred hhhHHHHHHHHHHHhhhccCCCCChHH
Q 003384 699 FVQAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 699 ~~~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
...+..+.+|+..||+.+|+.||++.+
T Consensus 233 ~~~S~~~kEFV~~CL~k~P~~RpsA~~ 259 (467)
T KOG0201|consen 233 GDFSPPFKEFVEACLDKNPEFRPSAKE 259 (467)
T ss_pred cccCHHHHHHHHHHhhcCcccCcCHHH
Confidence 355778999999999999999999843
No 55
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=1.7e-36 Score=327.37 Aligned_cols=254 Identities=26% Similarity=0.497 Sum_probs=203.0
Q ss_pred CCCccceeeecCceEEEEEEEC-------CeEEEEEEecCCCCCCchhHHHHHHHHHhcCCCceeeEecccC--CceEEE
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR-------HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLV 535 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~-------~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV 535 (824)
+|.....||+|+||.||+|... +..+++|.+..........+.+|+.+++.++||||+++++++. +..++|
T Consensus 6 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 85 (291)
T cd05094 6 DIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMV 85 (291)
T ss_pred HeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEEE
Confidence 4677788999999999999753 2458999987655444567999999999999999999999884 468899
Q ss_pred EEecCCCChhhhhhccC-------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcc
Q 003384 536 YEYLPNGSLEDRLSCKD-------------NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVS 602 (824)
Q Consensus 536 ~Ey~~ggsL~~~L~~~~-------------~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~v 602 (824)
|||+++++|.+++.... ....+++..++.++.+++.||.|||. ++|+||||||+|||++.++.+
T Consensus 86 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~---~~i~H~dlkp~Nil~~~~~~~ 162 (291)
T cd05094 86 FEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLAS---QHFVHRDLATRNCLVGANLLV 162 (291)
T ss_pred EecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccCcceEEEccCCcE
Confidence 99999999999985432 12348999999999999999999999 899999999999999999999
Q ss_pred eeeccccccccccccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHh-CCCCCCCchHHH--H
Q 003384 603 KLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQ--Y 679 (824)
Q Consensus 603 KL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELlt-G~~Pf~~~~~~~--~ 679 (824)
||+|||++.......... ......|+..|+|||++.+..++.++|||||||++|+|+| |++||....... .
T Consensus 163 ~l~dfg~a~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~ 236 (291)
T cd05094 163 KIGDFGMSRDVYSTDYYR------VGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIE 236 (291)
T ss_pred EECCCCcccccCCCceee------cCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence 999999997654322111 1123457889999999999999999999999999999999 999986543321 1
Q ss_pred HHhhhccccccCCCCCCCChhhHHHHHHHHHHHhhhccCCCCChHHHHHHHHHHHHh
Q 003384 680 ALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRA 736 (824)
Q Consensus 680 ~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le~l~~ 736 (824)
....+ .....+...+..+.+++.+||+.+|.+||++ .+|.+.|+.+..
T Consensus 237 ~~~~~--------~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~-~~v~~~l~~~~~ 284 (291)
T cd05094 237 CITQG--------RVLERPRVCPKEVYDIMLGCWQREPQQRLNI-KEIYKILHALGK 284 (291)
T ss_pred HHhCC--------CCCCCCccCCHHHHHHHHHHcccChhhCcCH-HHHHHHHHHHHh
Confidence 11111 1112233456789999999999999999999 788888887744
No 56
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.9e-36 Score=333.88 Aligned_cols=246 Identities=23% Similarity=0.346 Sum_probs=193.3
Q ss_pred CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC-CCchhHHHHHHHHHhcCCCceeeEeccc--CCceEEEEEe
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEY 538 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l~HpnIv~L~g~~--~~~~~LV~Ey 538 (824)
++|+..+.||+|+||.||++... +..||+|++..... .....+.+|+++|++++||||+++++++ .+..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 84 (331)
T cd06649 5 DDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 84 (331)
T ss_pred ccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEeec
Confidence 57889999999999999999886 57899999875422 1234689999999999999999999987 3468999999
Q ss_pred cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccc
Q 003384 539 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEI 618 (824)
Q Consensus 539 ~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~ 618 (824)
+++|+|.+++.. ...+++..+..++.+++.||.|||+. .+|+||||||+|||++.++.+||+|||++..+....
T Consensus 85 ~~~~~L~~~l~~---~~~~~~~~~~~~~~~i~~~l~~lH~~--~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~- 158 (331)
T cd06649 85 MDGGSLDQVLKE---AKRIPEEILGKVSIAVLRGLAYLREK--HQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM- 158 (331)
T ss_pred CCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHhhc--CCEEcCCCChhhEEEcCCCcEEEccCcccccccccc-
Confidence 999999999853 34588999999999999999999982 259999999999999999999999999987653321
Q ss_pred cCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhcc------------
Q 003384 619 SSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKL------------ 686 (824)
Q Consensus 619 ~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~------------ 686 (824)
.....||+.|+|||++.+..++.++|||||||++|||+||+.||............+..
T Consensus 159 ---------~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (331)
T cd06649 159 ---------ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSI 229 (331)
T ss_pred ---------cccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCcccc
Confidence 12345899999999999989999999999999999999999999654322211100000
Q ss_pred ----------------------------ccccCCCCCCC-ChhhHHHHHHHHHHHhhhccCCCCChH
Q 003384 687 ----------------------------KNLLDPLAGDW-PFVQAEQLANLAMRCCEMSRKSRPELG 724 (824)
Q Consensus 687 ----------------------------~~~ld~~~~~~-p~~~~~~l~~Li~~Cl~~~P~~RPt~~ 724 (824)
..+........ ....+.++.+|+.+||+.+|++||++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ 296 (331)
T cd06649 230 SPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLK 296 (331)
T ss_pred CcccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHH
Confidence 00000000001 112456899999999999999999994
No 57
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=1.3e-36 Score=325.47 Aligned_cols=253 Identities=25% Similarity=0.416 Sum_probs=197.7
Q ss_pred hcCCCCccceeeecCceEEEEEEECC-------eEEEEEEecCCCC-CCchhHHHHHHHHHhcCCCceeeEecccC--Cc
Q 003384 462 ATHNFDPSLKIGEGGYGSIYKGLLRH-------MQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGACP--EV 531 (824)
Q Consensus 462 ~~~~f~~~~~LG~G~fG~Vykg~~~~-------~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~ 531 (824)
.+++|+..+.||+|+||.||+|.+.+ ..||||++..... .....|.+|+.+++.++||||+++++++. ..
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~ 83 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP 83 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 45678999999999999999997642 5699998864322 22346889999999999999999999985 45
Q ss_pred eEEEEEecCCCChhhhhhccCC-------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCccee
Q 003384 532 WTLVYEYLPNGSLEDRLSCKDN-------SPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKL 604 (824)
Q Consensus 532 ~~LV~Ey~~ggsL~~~L~~~~~-------~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL 604 (824)
.++||||+++|+|.+++..... ...+++..++.++.+++.||.|||+ .+++||||||+|||++.++.+||
T Consensus 84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~~vH~dlkp~Nil~~~~~~~~l 160 (277)
T cd05062 84 TLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKI 160 (277)
T ss_pred eEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCcchheEEEcCCCCEEE
Confidence 8899999999999999854221 2346788999999999999999999 89999999999999999999999
Q ss_pred eccccccccccccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHh-CCCCCCCchHHHHH--H
Q 003384 605 SDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYA--L 681 (824)
Q Consensus 605 ~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELlt-G~~Pf~~~~~~~~~--~ 681 (824)
+|||+++.......... .....+++.|+|||++.++.++.++|||||||++|||++ |.+||......... .
T Consensus 161 ~dfg~~~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~ 234 (277)
T cd05062 161 GDFGMTRDIYETDYYRK------GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFV 234 (277)
T ss_pred CCCCCccccCCcceeec------CCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence 99999876543321111 122346789999999998899999999999999999999 78898654332111 1
Q ss_pred hhhccccccCCCCCCCChhhHHHHHHHHHHHhhhccCCCCChHHHHHHHHH
Q 003384 682 DTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLE 732 (824)
Q Consensus 682 ~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le 732 (824)
..+. ....+...+..+.+++.+||+.+|.+||++ .+++..|+
T Consensus 235 ~~~~--------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~-~e~l~~l~ 276 (277)
T cd05062 235 MEGG--------LLDKPDNCPDMLFELMRMCWQYNPKMRPSF-LEIISSIK 276 (277)
T ss_pred HcCC--------cCCCCCCCCHHHHHHHHHHcCCChhhCcCH-HHHHHHhh
Confidence 1111 112234456789999999999999999999 56655553
No 58
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=9.7e-37 Score=336.10 Aligned_cols=231 Identities=23% Similarity=0.265 Sum_probs=187.4
Q ss_pred ceeeecCceEEEEEEEC--CeEEEEEEecCCCC---CCchhHHHHHHHHHhcCCCceeeEecccC--CceEEEEEecCCC
Q 003384 470 LKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYLPNG 542 (824)
Q Consensus 470 ~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~---~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~Ey~~gg 542 (824)
+.||+|+||.||++... +..||||++..... .....+.+|+.+++.++||||+++++++. +..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 36999999999999875 57899999875422 22346788999999999999999999873 4689999999999
Q ss_pred ChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccccCCC
Q 003384 543 SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNN 622 (824)
Q Consensus 543 sL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~~~~ 622 (824)
+|.+++.. ...+++..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+++........
T Consensus 81 ~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~--- 151 (328)
T cd05593 81 ELFFHLSR---ERVFSEDRTRFYGAEIVSALDYLHS---GKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAAT--- 151 (328)
T ss_pred CHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEecccCHHHeEECCCCcEEEecCcCCccCCCcccc---
Confidence 99988843 3468999999999999999999999 89999999999999999999999999998753221110
Q ss_pred ccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCCCCChhhH
Q 003384 623 TTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQA 702 (824)
Q Consensus 623 ~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~ 702 (824)
.....||+.|+|||++.+..++.++|||||||++|+|+||++||............ ......+|...+
T Consensus 152 -----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~-------~~~~~~~p~~~~ 219 (328)
T cd05593 152 -----MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELI-------LMEDIKFPRTLS 219 (328)
T ss_pred -----cccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHh-------ccCCccCCCCCC
Confidence 12346999999999999989999999999999999999999999765432211110 011122344566
Q ss_pred HHHHHHHHHHhhhccCCCC
Q 003384 703 EQLANLAMRCCEMSRKSRP 721 (824)
Q Consensus 703 ~~l~~Li~~Cl~~~P~~RP 721 (824)
..+.+|+.+||+.+|.+||
T Consensus 220 ~~~~~li~~~L~~dP~~R~ 238 (328)
T cd05593 220 ADAKSLLSGLLIKDPNKRL 238 (328)
T ss_pred HHHHHHHHHHcCCCHHHcC
Confidence 7899999999999999998
No 59
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=4.5e-36 Score=322.33 Aligned_cols=252 Identities=23% Similarity=0.399 Sum_probs=197.5
Q ss_pred CCCccceeeecCceEEEEEEEC--Ce----EEEEEEecCCCCC-CchhHHHHHHHHHhcCCCceeeEecccC-CceEEEE
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR--HM----QVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACP-EVWTLVY 536 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~--~~----~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIv~L~g~~~-~~~~LV~ 536 (824)
+|...+.||+|+||.||+|.+. +. .|++|.+...... ....+..|+.+++.++||||++++|++. ...++|+
T Consensus 8 ~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~~~~~~i~ 87 (279)
T cd05111 8 ELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPGASLQLVT 87 (279)
T ss_pred hceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECCCccEEEE
Confidence 5677789999999999999873 33 4788887543221 2346778888999999999999999885 4567999
Q ss_pred EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccc
Q 003384 537 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQN 616 (824)
Q Consensus 537 Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~ 616 (824)
||+++|+|.+++... ...+++..+..|+.|++.||.|||+ ++++||||||+|||++.++.+||+|||+++.+...
T Consensus 88 e~~~~gsL~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~---~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~ 162 (279)
T cd05111 88 QLSPLGSLLDHVRQH--RDSLDPQRLLNWCVQIAKGMYYLEE---HRMVHRNLAARNILLKSDSIVQIADFGVADLLYPD 162 (279)
T ss_pred EeCCCCcHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHH---CCEeccccCcceEEEcCCCcEEEcCCccceeccCC
Confidence 999999999999532 3468999999999999999999999 88999999999999999999999999999866433
Q ss_pred cccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHh-CCCCCCCchHHH--HHHhhhccccccCCC
Q 003384 617 EISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQ--YALDTGKLKNLLDPL 693 (824)
Q Consensus 617 ~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELlt-G~~Pf~~~~~~~--~~~~~~~~~~~ld~~ 693 (824)
..... .....|+..|+|||++.++.++.++|||||||++|||+| |+.||....... ..+..+..
T Consensus 163 ~~~~~------~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~------- 229 (279)
T cd05111 163 DKKYF------YSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLLEKGER------- 229 (279)
T ss_pred Ccccc------cCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCc-------
Confidence 21111 123457889999999998899999999999999999998 999997543322 11221111
Q ss_pred CCCCChhhHHHHHHHHHHHhhhccCCCCChHHHHHHHHHHHHh
Q 003384 694 AGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRA 736 (824)
Q Consensus 694 ~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le~l~~ 736 (824)
...+...+..+..++.+||..+|..||++ .++...|..+..
T Consensus 230 -~~~~~~~~~~~~~li~~c~~~~p~~Rps~-~el~~~l~~~~~ 270 (279)
T cd05111 230 -LAQPQICTIDVYMVMVKCWMIDENVRPTF-KELANEFTRMAR 270 (279)
T ss_pred -CCCCCCCCHHHHHHHHHHcCCCcccCcCH-HHHHHHHHHHHh
Confidence 11122345678999999999999999999 667777766543
No 60
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=2e-36 Score=326.35 Aligned_cols=256 Identities=24% Similarity=0.468 Sum_probs=204.0
Q ss_pred CCCCccceeeecCceEEEEEEEC-------CeEEEEEEecCCCCCCchhHHHHHHHHHhcCCCceeeEecccC--CceEE
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLLR-------HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTL 534 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~~-------~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~L 534 (824)
.+|...+.||+|+||.||++... +..+|+|.+..........+.+|+.++++++||||++++++|. +..++
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 84 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEE
Confidence 46788889999999999999752 2458999887554334557899999999999999999999884 46889
Q ss_pred EEEecCCCChhhhhhccC----------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCccee
Q 003384 535 VYEYLPNGSLEDRLSCKD----------NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKL 604 (824)
Q Consensus 535 V~Ey~~ggsL~~~L~~~~----------~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL 604 (824)
||||+++++|.+++.... ....+++..++.++.|++.||.|||+ +|++||||||+|||++.++.+||
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~---~~i~H~dlkp~Nili~~~~~~kl 161 (288)
T cd05093 85 VFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLAS---QHFVHRDLATRNCLVGENLLVKI 161 (288)
T ss_pred EEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccCcceEEEccCCcEEe
Confidence 999999999999885322 12358999999999999999999999 89999999999999999999999
Q ss_pred eccccccccccccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHh-CCCCCCCchHHH--HHH
Q 003384 605 SDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQ--YAL 681 (824)
Q Consensus 605 ~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELlt-G~~Pf~~~~~~~--~~~ 681 (824)
+|||+++......... ......+++.|+|||++.+..++.++|||||||++|+|+| |.+||....... ..+
T Consensus 162 ~dfg~~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i 235 (288)
T cd05093 162 GDFGMSRDVYSTDYYR------VGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECI 235 (288)
T ss_pred ccCCccccccCCceee------cCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence 9999998654322111 1123346789999999998899999999999999999998 999996543221 222
Q ss_pred hhhccccccCCCCCCCChhhHHHHHHHHHHHhhhccCCCCChHHHHHHHHHHHHhh
Q 003384 682 DTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRAS 737 (824)
Q Consensus 682 ~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le~l~~~ 737 (824)
..+.. ...+...+..+.+|+.+||+.+|.+||++ +++...|+.+...
T Consensus 236 ~~~~~--------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~-~~v~~~l~~~~~~ 282 (288)
T cd05093 236 TQGRV--------LQRPRTCPKEVYDLMLGCWQREPHMRLNI-KEIHSLLQNLAKA 282 (288)
T ss_pred HcCCc--------CCCCCCCCHHHHHHHHHHccCChhhCCCH-HHHHHHHHHHHHh
Confidence 22211 11223345689999999999999999999 7788888887653
No 61
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=8.3e-37 Score=340.76 Aligned_cols=249 Identities=23% Similarity=0.304 Sum_probs=192.7
Q ss_pred CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC---CCchhHHHHHHHHHhcCCCceeeEecccC--CceEEEE
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVY 536 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~---~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~ 536 (824)
++|...+.||+|+||.||+|... +..||||++..... .....+.+|+.+|..++||||+++++++. +..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 36888999999999999999875 57899999875321 22345788999999999999999999884 4688999
Q ss_pred EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccc
Q 003384 537 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQN 616 (824)
Q Consensus 537 Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~ 616 (824)
||++||+|.+++.. ...+++..+..++.|++.||.|||+ ++|+||||||+|||++.++.+||+|||++..+...
T Consensus 81 E~~~~g~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 154 (364)
T cd05599 81 EYLPGGDMMTLLMK---KDTFTEEETRFYIAETILAIDSIHK---LGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKS 154 (364)
T ss_pred CCCCCcHHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeEECCCCCEEEeecccceecccc
Confidence 99999999999853 3468999999999999999999999 89999999999999999999999999999765322
Q ss_pred cccCCCc------------------------------cccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHh
Q 003384 617 EISSNNT------------------------------TLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT 666 (824)
Q Consensus 617 ~~~~~~~------------------------------~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELlt 666 (824)
....... .........||+.|+|||++.+..++.++|||||||++|||++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~ 234 (364)
T cd05599 155 HRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLV 234 (364)
T ss_pred ccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhc
Confidence 1100000 0000113469999999999999999999999999999999999
Q ss_pred CCCCCCCchHHHHHHhhhccccccCCCCCCCChhhHHHHHHHHHHHhhhccCCCCC
Q 003384 667 GRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPE 722 (824)
Q Consensus 667 G~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt 722 (824)
|++||.................. .........+..+.+|+.+|+. +|.+|++
T Consensus 235 G~~Pf~~~~~~~~~~~i~~~~~~---~~~~~~~~~s~~~~~li~~ll~-~p~~R~~ 286 (364)
T cd05599 235 GYPPFCSDNPQETYRKIINWKET---LQFPDEVPLSPEAKDLIKRLCC-EAERRLG 286 (364)
T ss_pred CCCCCCCCCHHHHHHHHHcCCCc---cCCCCCCCCCHHHHHHHHHHcc-CHhhcCC
Confidence 99999766543321111111111 1111112345688999999996 8999998
No 62
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-37 Score=344.96 Aligned_cols=254 Identities=28% Similarity=0.448 Sum_probs=203.2
Q ss_pred CCCccceeeecCceEEEEEEECC-----eE-EEEEEecCCC---CCCchhHHHHHHHHHhcCCCceeeEeccc--CCceE
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLRH-----MQ-VAIKMLHPHS---LQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWT 533 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~~-----~~-VAvK~l~~~~---~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~--~~~~~ 533 (824)
+-...++||+|+||+||+|.+.- .. ||||..+... .....+|.+|.++|++++|||||++||++ ....+
T Consensus 158 ~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~ 237 (474)
T KOG0194|consen 158 DIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLM 237 (474)
T ss_pred CccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccE
Confidence 33455899999999999998752 23 8999987533 22345799999999999999999999987 45789
Q ss_pred EEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccc
Q 003384 534 LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFL 613 (824)
Q Consensus 534 LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~ 613 (824)
||||+|+||+|.++|.... ..++..+++.++.++|+||.|||+ +++|||||-..|+|++.++.+||+||||++.-
T Consensus 238 ivmEl~~gGsL~~~L~k~~--~~v~~~ek~~~~~~AA~Gl~YLh~---k~~IHRDIAARNcL~~~~~~vKISDFGLs~~~ 312 (474)
T KOG0194|consen 238 LVMELCNGGSLDDYLKKNK--KSLPTLEKLRFCYDAARGLEYLHS---KNCIHRDIAARNCLYSKKGVVKISDFGLSRAG 312 (474)
T ss_pred EEEEecCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHhHHHHHHH---CCCcchhHhHHHheecCCCeEEeCccccccCC
Confidence 9999999999999996433 369999999999999999999999 89999999999999999999999999998754
Q ss_pred ccccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHh-CCCCCCCchHHHHHHhhhccccccCC
Q 003384 614 SQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDP 692 (824)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELlt-G~~Pf~~~~~~~~~~~~~~~~~~ld~ 692 (824)
..-.... ....-...|+|||.+..+-|+.++|||||||++||+++ |..||.+.......... . ...
T Consensus 313 ~~~~~~~--------~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI--~---~~~ 379 (474)
T KOG0194|consen 313 SQYVMKK--------FLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKI--V---KNG 379 (474)
T ss_pred cceeecc--------ccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHH--H---hcC
Confidence 3111110 01124679999999999999999999999999999998 88899776543321111 0 111
Q ss_pred CCCCCChhhHHHHHHHHHHHhhhccCCCCChHHHHHHHHHHHHhh
Q 003384 693 LAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRAS 737 (824)
Q Consensus 693 ~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le~l~~~ 737 (824)
.....|...+..+..+..+||..+|++||+| ..+.+.|+.+...
T Consensus 380 ~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm-~~i~~~l~~~~~~ 423 (474)
T KOG0194|consen 380 YRMPIPSKTPKELAKVMKQCWKKDPEDRPTM-STIKKKLEALEKK 423 (474)
T ss_pred ccCCCCCCCHHHHHHHHHHhccCChhhccCH-HHHHHHHHHHHhc
Confidence 1223345677899999999999999999999 7788888877654
No 63
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=9.9e-37 Score=337.72 Aligned_cols=252 Identities=25% Similarity=0.316 Sum_probs=197.6
Q ss_pred CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC---CCchhHHHHHHHHHhcCCCceeeEecccC--CceEEEEE
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYE 537 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~---~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~E 537 (824)
+|...+.||+|+||.||+|... +..||||++..... .....+..|+.++..++||||+++++++. +..++|||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (350)
T cd05573 2 DFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVME 81 (350)
T ss_pred CceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEEc
Confidence 6888899999999999999987 68899999875321 23456889999999999999999999884 46889999
Q ss_pred ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccccc
Q 003384 538 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNE 617 (824)
Q Consensus 538 y~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~ 617 (824)
|+++|+|.+++... ..++...+..++.|++.||.|||. +||+||||||+||||+.++.+||+|||++..+....
T Consensus 82 ~~~~~~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~---~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~ 155 (350)
T cd05573 82 YMPGGDLMNLLIRK---DVFPEETARFYIAELVLALDSVHK---LGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAK 155 (350)
T ss_pred CCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEeecCCCCccCcccC
Confidence 99999999999533 568999999999999999999999 899999999999999999999999999998665432
Q ss_pred ccC---------------------CCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchH
Q 003384 618 ISS---------------------NNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKE 676 (824)
Q Consensus 618 ~~~---------------------~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~ 676 (824)
... ............||+.|+|||++.+..++.++|||||||+||+|++|++||.....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~ 235 (350)
T cd05573 156 DREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTL 235 (350)
T ss_pred cccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCH
Confidence 000 00000112345699999999999999999999999999999999999999976653
Q ss_pred HHHHHhhhccccccCCCCCCCChhhHHHHHHHHHHHhhhccCCCCC-hHHHH
Q 003384 677 VQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPE-LGKDV 727 (824)
Q Consensus 677 ~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt-~~~~v 727 (824)
............ ..........+..+.+|+.+|+. +|.+||+ + +++
T Consensus 236 ~~~~~~i~~~~~---~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~-~~l 282 (350)
T cd05573 236 QETYNKIINWKE---SLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSF-EEI 282 (350)
T ss_pred HHHHHHHhccCC---cccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCH-HHH
Confidence 322211111101 11111111246789999999997 9999999 6 444
No 64
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=3e-36 Score=320.17 Aligned_cols=251 Identities=27% Similarity=0.485 Sum_probs=200.7
Q ss_pred CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCCchhHHHHHHHHHhcCCCceeeEecccC--CceEEEEEecC
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYLP 540 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~Ey~~ 540 (824)
.|...+.||.|+||.||+|.+. +..||+|.+.... .....+.+|+.+++.++||||++++++|. +..++||||++
T Consensus 7 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 85 (263)
T cd05052 7 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMT 85 (263)
T ss_pred HeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc-hHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeCC
Confidence 4677788999999999999875 5789999986532 33467899999999999999999999883 46789999999
Q ss_pred CCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccccC
Q 003384 541 NGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISS 620 (824)
Q Consensus 541 ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~~ 620 (824)
+++|.+++.... ...+++..++.++.|++.||.|||. ++++||||||+|||++.++.+||+|||++..........
T Consensus 86 ~~~L~~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~ 161 (263)
T cd05052 86 YGNLLDYLRECN-RQEVNAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 161 (263)
T ss_pred CCcHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHh---CCEeecccCcceEEEcCCCcEEeCCCccccccccceeec
Confidence 999999985432 3468999999999999999999999 899999999999999999999999999998664332111
Q ss_pred CCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHh-CCCCCCCchHHHHHHhhhccccccCCCCCCCCh
Q 003384 621 NNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWPF 699 (824)
Q Consensus 621 ~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELlt-G~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~ 699 (824)
. ....++..|+|||++.+..++.++|||||||++|||+| |.+||........... +.. ......+.
T Consensus 162 ~-------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~---~~~---~~~~~~~~ 228 (263)
T cd05052 162 H-------AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL---LEK---GYRMERPE 228 (263)
T ss_pred c-------CCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH---HHC---CCCCCCCC
Confidence 0 12234678999999998999999999999999999998 9999975432211101 001 11123344
Q ss_pred hhHHHHHHHHHHHhhhccCCCCChHHHHHHHHHHH
Q 003384 700 VQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM 734 (824)
Q Consensus 700 ~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le~l 734 (824)
..+..+.+++.+||+.+|.+||++ .++.+.|+.+
T Consensus 229 ~~~~~~~~li~~cl~~~p~~Rp~~-~~l~~~l~~~ 262 (263)
T cd05052 229 GCPPKVYELMRACWQWNPSDRPSF-AEIHQAFETM 262 (263)
T ss_pred CCCHHHHHHHHHHccCCcccCCCH-HHHHHHHHhh
Confidence 556789999999999999999999 6777777653
No 65
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=3.5e-36 Score=319.01 Aligned_cols=252 Identities=27% Similarity=0.462 Sum_probs=201.0
Q ss_pred cCCCCccceeeecCceEEEEEEECC-eEEEEEEecCCCCCCchhHHHHHHHHHhcCCCceeeEecccC--CceEEEEEec
Q 003384 463 THNFDPSLKIGEGGYGSIYKGLLRH-MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYL 539 (824)
Q Consensus 463 ~~~f~~~~~LG~G~fG~Vykg~~~~-~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~Ey~ 539 (824)
..+|...+.||+|+||.||+|.+.+ ..||||.+.... .....+.+|+.++++++||||+++++++. ...++||||+
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 83 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELM 83 (261)
T ss_pred hhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeecc
Confidence 3468888999999999999998754 679999987543 23567999999999999999999999884 4588999999
Q ss_pred CCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccccccc
Q 003384 540 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEIS 619 (824)
Q Consensus 540 ~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~ 619 (824)
++++|.+++.... ...+++..+..++.+++.||.|||. ++|+||||||+|||++.++.+||+|||++.........
T Consensus 84 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~ 159 (261)
T cd05068 84 KYGSLLEYLQGGA-GRALKLPQLIDMAAQVASGMAYLEA---QNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIYE 159 (261)
T ss_pred cCCcHHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCCcceEEEcCCCCEEECCcceEEEccCCccc
Confidence 9999999985432 3468999999999999999999999 89999999999999999999999999999876532111
Q ss_pred CCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHh-CCCCCCCchHHHHHHhhhccccccCCCCCCCC
Q 003384 620 SNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWP 698 (824)
Q Consensus 620 ~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELlt-G~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p 698 (824)
.. ....++..|+|||++.+..++.++|||||||++|+|+| |++||............... . ....+
T Consensus 160 ~~-------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~---~---~~~~~ 226 (261)
T cd05068 160 AR-------EGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQG---Y---RMPCP 226 (261)
T ss_pred cc-------CCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcC---C---CCCCC
Confidence 00 11223568999999998899999999999999999999 99999764432211111100 0 01123
Q ss_pred hhhHHHHHHHHHHHhhhccCCCCChHHHHHHHHHH
Q 003384 699 FVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEP 733 (824)
Q Consensus 699 ~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le~ 733 (824)
...+..+.+++.+|++.+|.+||++ +.+...|+.
T Consensus 227 ~~~~~~~~~li~~~l~~~P~~Rp~~-~~l~~~l~~ 260 (261)
T cd05068 227 PGCPKELYDIMLDCWKEDPDDRPTF-ETLQWKLED 260 (261)
T ss_pred CcCCHHHHHHHHHHhhcCcccCCCH-HHHHHHHhc
Confidence 3456789999999999999999999 677777764
No 66
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=1.6e-36 Score=332.58 Aligned_cols=236 Identities=25% Similarity=0.299 Sum_probs=188.2
Q ss_pred eeeecCceEEEEEEEC--CeEEEEEEecCCC---CCCchhHHHHHHHHHhc-CCCceeeEecccC--CceEEEEEecCCC
Q 003384 471 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHS---LQGPSEFQQEIDILSKI-RHPNLVTLVGACP--EVWTLVYEYLPNG 542 (824)
Q Consensus 471 ~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~---~~~~~~f~~Ei~iL~~l-~HpnIv~L~g~~~--~~~~LV~Ey~~gg 542 (824)
.||+|+||.||+|... +..||||++.... ......+..|..++..+ +||||+++++++. +..++||||++||
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~gg 81 (316)
T cd05592 2 VLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNGG 81 (316)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCC
Confidence 6999999999999886 4679999987532 12234456677777654 8999999999873 4688999999999
Q ss_pred ChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccccCCC
Q 003384 543 SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNN 622 (824)
Q Consensus 543 sL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~~~~ 622 (824)
+|.+++.. ...++...+..++.|++.||.|||+ ++|+||||||+|||++.++.+||+|||+++.......
T Consensus 82 ~L~~~~~~---~~~~~~~~~~~~~~qi~~al~~LH~---~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~---- 151 (316)
T cd05592 82 DLMFHIQS---SGRFDEARARFYAAEIICGLQFLHK---KGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEG---- 151 (316)
T ss_pred cHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCC----
Confidence 99998843 3468899999999999999999999 8999999999999999999999999999975432211
Q ss_pred ccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCCCCChhhH
Q 003384 623 TTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQA 702 (824)
Q Consensus 623 ~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~ 702 (824)
......||+.|+|||++.+..++.++|||||||++|+|++|+.||...+......... ......|...+
T Consensus 152 ----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~-------~~~~~~~~~~~ 220 (316)
T cd05592 152 ----KASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSIL-------NDRPHFPRWIS 220 (316)
T ss_pred ----ccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHH-------cCCCCCCCCCC
Confidence 0123468999999999999899999999999999999999999997654322211110 11122344566
Q ss_pred HHHHHHHHHHhhhccCCCCChHHHH
Q 003384 703 EQLANLAMRCCEMSRKSRPELGKDV 727 (824)
Q Consensus 703 ~~l~~Li~~Cl~~~P~~RPt~~~~v 727 (824)
..+.+++.+||+.+|.+||++.+.+
T Consensus 221 ~~~~~ll~~~l~~~P~~R~~~~~~l 245 (316)
T cd05592 221 KEAKDCLSKLFERDPTKRLGVDGDI 245 (316)
T ss_pred HHHHHHHHHHccCCHHHcCCChHHH
Confidence 7899999999999999999985444
No 67
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=2.4e-36 Score=323.08 Aligned_cols=251 Identities=25% Similarity=0.455 Sum_probs=199.3
Q ss_pred CCCCccceeeecCceEEEEEEEC-------CeEEEEEEecCCCCC-CchhHHHHHHHHHhcCCCceeeEecccC--CceE
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLLR-------HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWT 533 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~~-------~~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~ 533 (824)
.+|...+.||+|+||.||+|... +..||||.+...... ....|.+|+++|+.++||||+++++++. ...+
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 84 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPI 84 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeE
Confidence 35777889999999999999763 257999998765433 2457999999999999999999999884 4689
Q ss_pred EEEEecCCCChhhhhhccC-----------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcc
Q 003384 534 LVYEYLPNGSLEDRLSCKD-----------NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVS 602 (824)
Q Consensus 534 LV~Ey~~ggsL~~~L~~~~-----------~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~v 602 (824)
+||||+++|+|.+++.... ....+++..+..++.+++.||.|||. ++++||||||+|||++.++.+
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~---~~i~h~dlkp~nili~~~~~~ 161 (280)
T cd05049 85 MVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLAS---QHFVHRDLATRNCLVGYDLVV 161 (280)
T ss_pred EEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhh---CCeeccccccceEEEcCCCeE
Confidence 9999999999999996432 13458889999999999999999999 899999999999999999999
Q ss_pred eeeccccccccccccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHh-CCCCCCCchHHH--H
Q 003384 603 KLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQ--Y 679 (824)
Q Consensus 603 KL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELlt-G~~Pf~~~~~~~--~ 679 (824)
||+|||++........... .....+++.|+|||++.+..++.++|||||||++|+|++ |..||....... .
T Consensus 162 kl~d~g~~~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~ 235 (280)
T cd05049 162 KIGDFGMSRDVYTTDYYRV------GGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIE 235 (280)
T ss_pred EECCcccceecccCcceec------CCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Confidence 9999999875533221110 123346789999999999999999999999999999998 999986543222 1
Q ss_pred HHhhhccccccCCCCCCCChhhHHHHHHHHHHHhhhccCCCCChHHHHHHHHH
Q 003384 680 ALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLE 732 (824)
Q Consensus 680 ~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le 732 (824)
....+. ....+...+..+.+++.+||+.+|.+||++ +++++.|+
T Consensus 236 ~~~~~~--------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~-~eil~~l~ 279 (280)
T cd05049 236 CITQGR--------LLQRPRTCPSEVYDIMLGCWKRDPQQRINI-KDIHERLQ 279 (280)
T ss_pred HHHcCC--------cCCCCCCCCHHHHHHHHHHcCCCcccCCCH-HHHHHHhh
Confidence 111111 111233456789999999999999999999 66766654
No 68
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=5.5e-37 Score=324.63 Aligned_cols=237 Identities=24% Similarity=0.414 Sum_probs=200.3
Q ss_pred hcCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCC---chhHHHHHHHHHhcCCCceeeEecccC--CceEE
Q 003384 462 ATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG---PSEFQQEIDILSKIRHPNLVTLVGACP--EVWTL 534 (824)
Q Consensus 462 ~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~---~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~L 534 (824)
...+|++.+.||+|.||.|-++..+ ++.||||.+++....+ .-.+.+|++||+.|+||||+.+|.+|. +...|
T Consensus 51 lkHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvi 130 (668)
T KOG0611|consen 51 LKHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVI 130 (668)
T ss_pred hhhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEE
Confidence 3457888899999999999999764 6899999998765443 446889999999999999999999995 46889
Q ss_pred EEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccc
Q 003384 535 VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLS 614 (824)
Q Consensus 535 V~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~ 614 (824)
||||..+|.|+|++. ....|++.....++.||..|+.|+|. ++++|||||.+|||||.|+++||+||||+.++.
T Consensus 131 vMEYaS~GeLYDYiS---er~~LsErEaRhfFRQIvSAVhYCHk---nrVvHRDLKLENILLD~N~NiKIADFGLSNly~ 204 (668)
T KOG0611|consen 131 VMEYASGGELYDYIS---ERGSLSEREARHFFRQIVSAVHYCHK---NRVVHRDLKLENILLDQNNNIKIADFGLSNLYA 204 (668)
T ss_pred EEEecCCccHHHHHH---HhccccHHHHHHHHHHHHHHHHHHhh---ccceecccchhheeecCCCCeeeeccchhhhhc
Confidence 999999999999995 44569999999999999999999999 899999999999999999999999999999887
Q ss_pred cccccCCCccccccCCCCCCcccCChhhhccCCC-CcchhHHhHHHHHHHHHhCCCCCCCchHHHH--HHhhhccccccC
Q 003384 615 QNEISSNNTTLCCRTDPKGTFAYMDPEFLASGEL-TPKSDVYSFGIILLRLLTGRPALGITKEVQY--ALDTGKLKNLLD 691 (824)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~-t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~--~~~~~~~~~~ld 691 (824)
...+. .++.|++.|.+||++.+.+| ++.+|-|||||+||.|+.|.-||++.+.-.. .+..|...+
T Consensus 205 ~~kfL---------qTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~GaYrE--- 272 (668)
T KOG0611|consen 205 DKKFL---------QTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGAYRE--- 272 (668)
T ss_pred cccHH---------HHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhcccccC---
Confidence 65432 34569999999999999887 5789999999999999999999998765332 222222211
Q ss_pred CCCCCCChhhHHHHHHHHHHHhhhccCCCCCh
Q 003384 692 PLAGDWPFVQAEQLANLAMRCCEMSRKSRPEL 723 (824)
Q Consensus 692 ~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~ 723 (824)
...+....-||.+||-.||++|-|+
T Consensus 273 -------P~~PSdA~gLIRwmLmVNP~RRATi 297 (668)
T KOG0611|consen 273 -------PETPSDASGLIRWMLMVNPERRATI 297 (668)
T ss_pred -------CCCCchHHHHHHHHHhcCcccchhH
Confidence 1223467889999999999999998
No 69
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=2.6e-36 Score=341.66 Aligned_cols=255 Identities=24% Similarity=0.394 Sum_probs=201.1
Q ss_pred hcCCCCccceeeecCceEEEEEEECC-------eEEEEEEecCCCCC-CchhHHHHHHHHHhcC-CCceeeEecccC--C
Q 003384 462 ATHNFDPSLKIGEGGYGSIYKGLLRH-------MQVAIKMLHPHSLQ-GPSEFQQEIDILSKIR-HPNLVTLVGACP--E 530 (824)
Q Consensus 462 ~~~~f~~~~~LG~G~fG~Vykg~~~~-------~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~-HpnIv~L~g~~~--~ 530 (824)
....|.+.++||+|+||.||+|.+.+ ..||||++...... ....|.+|+.+|+++. ||||++++|+|. .
T Consensus 35 ~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~ 114 (400)
T cd05105 35 PRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSG 114 (400)
T ss_pred cccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCC
Confidence 35578889999999999999998642 36999999754322 2356889999999996 999999999995 4
Q ss_pred ceEEEEEecCCCChhhhhhccC----------------------------------------------------------
Q 003384 531 VWTLVYEYLPNGSLEDRLSCKD---------------------------------------------------------- 552 (824)
Q Consensus 531 ~~~LV~Ey~~ggsL~~~L~~~~---------------------------------------------------------- 552 (824)
..+||||||++|+|.++|....
T Consensus 115 ~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (400)
T cd05105 115 PIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEI 194 (400)
T ss_pred ceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhh
Confidence 6899999999999998885421
Q ss_pred -----------------------------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEec
Q 003384 553 -----------------------------------NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLD 597 (824)
Q Consensus 553 -----------------------------------~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld 597 (824)
....+++..+..++.|++.||.|||. ++|+||||||+|||++
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivH~dikp~Nill~ 271 (400)
T cd05105 195 KEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLAS---KNCVHRDLAARNVLLA 271 (400)
T ss_pred hhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChHhEEEe
Confidence 01347888999999999999999999 8999999999999999
Q ss_pred CCCcceeeccccccccccccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHh-CCCCCCCchH
Q 003384 598 ANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKE 676 (824)
Q Consensus 598 ~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELlt-G~~Pf~~~~~ 676 (824)
.++.+||+|||+++.+....... ......+++.|+|||.+.+..++.++|||||||++|||++ |..||.....
T Consensus 272 ~~~~~kL~DfGla~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~ 345 (400)
T cd05105 272 QGKIVKICDFGLARDIMHDSNYV------SKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIV 345 (400)
T ss_pred CCCEEEEEeCCcceecccccccc------ccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccch
Confidence 99999999999998654322110 1123457889999999998899999999999999999997 9999864321
Q ss_pred ---HHHHHhhhccccccCCCCCCCChhhHHHHHHHHHHHhhhccCCCCChHHHHHHHHHHH
Q 003384 677 ---VQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM 734 (824)
Q Consensus 677 ---~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le~l 734 (824)
....+..+ .....+...+..+.+++.+||+.+|.+||++ ..|.++|+.+
T Consensus 346 ~~~~~~~~~~~--------~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~-~~l~~~l~~l 397 (400)
T cd05105 346 DSTFYNKIKSG--------YRMAKPDHATQEVYDIMVKCWNSEPEKRPSF-LHLSDIVESL 397 (400)
T ss_pred hHHHHHHHhcC--------CCCCCCccCCHHHHHHHHHHCccCHhHCcCH-HHHHHHHHHH
Confidence 11111111 1112234456789999999999999999999 6788888764
No 70
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=5.1e-36 Score=325.79 Aligned_cols=248 Identities=25% Similarity=0.363 Sum_probs=189.3
Q ss_pred cCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCC-CchhHHHHHHHHHhcCCCceeeEeccc--CCceEEEEE
Q 003384 463 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYE 537 (824)
Q Consensus 463 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIv~L~g~~--~~~~~LV~E 537 (824)
..+|...+.||.|+||.||+|... +..||||++...... ....+.+|+.+++.++||||+++++++ .+..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 83 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE 83 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence 457999999999999999999885 578999998754322 234678999999999999999999988 446889999
Q ss_pred ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccccc
Q 003384 538 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNE 617 (824)
Q Consensus 538 y~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~ 617 (824)
|+. ++|.+++.. ....++...+..++.|++.||.|||+ ++|+||||||+|||++.++.+||+|||++.......
T Consensus 84 ~~~-~~l~~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 157 (303)
T cd07869 84 YVH-TDLCQYMDK--HPGGLHPENVKLFLFQLLRGLSYIHQ---RYILHRDLKPQNLLISDTGELKLADFGLARAKSVPS 157 (303)
T ss_pred CCC-cCHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEECCCCcceeccCCC
Confidence 995 577777743 23458888999999999999999999 899999999999999999999999999987543221
Q ss_pred ccCCCccccccCCCCCCcccCChhhhcc-CCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhh-----ccc----
Q 003384 618 ISSNNTTLCCRTDPKGTFAYMDPEFLAS-GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTG-----KLK---- 687 (824)
Q Consensus 618 ~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~-----~~~---- 687 (824)
.. .....||+.|+|||++.+ ..++.++|||||||++|+|+||++||.........+..- ...
T Consensus 158 ~~--------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (303)
T cd07869 158 HT--------YSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTW 229 (303)
T ss_pred cc--------CCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhc
Confidence 10 123458999999999875 468889999999999999999999997654332211110 000
Q ss_pred ----c--ccCCC--CCCCC---------hhhHHHHHHHHHHHhhhccCCCCChH
Q 003384 688 ----N--LLDPL--AGDWP---------FVQAEQLANLAMRCCEMSRKSRPELG 724 (824)
Q Consensus 688 ----~--~ld~~--~~~~p---------~~~~~~l~~Li~~Cl~~~P~~RPt~~ 724 (824)
. ...+. ....+ ...+..+.+|+.+||+.+|.+||++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~ 283 (303)
T cd07869 230 PGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQ 283 (303)
T ss_pred cchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHH
Confidence 0 00000 00000 01235688999999999999999984
No 71
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=1.7e-36 Score=333.23 Aligned_cols=232 Identities=27% Similarity=0.359 Sum_probs=186.5
Q ss_pred ceeeecCceEEEEEEE-----CCeEEEEEEecCCC----CCCchhHHHHHHHHHhcCCCceeeEecccC--CceEEEEEe
Q 003384 470 LKIGEGGYGSIYKGLL-----RHMQVAIKMLHPHS----LQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEY 538 (824)
Q Consensus 470 ~~LG~G~fG~Vykg~~-----~~~~VAvK~l~~~~----~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~Ey 538 (824)
+.||+|+||.||++.. .+..||||++.... ......+..|+.+|+.++||||++++++|. +..++||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 5799999999999875 35789999987532 122345788999999999999999999884 468899999
Q ss_pred cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccc
Q 003384 539 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEI 618 (824)
Q Consensus 539 ~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~ 618 (824)
+++|+|.+++.. ...++......++.|++.||.|||+ ++|+||||||+|||++.++.+||+|||+++.......
T Consensus 82 ~~~~~L~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 155 (323)
T cd05584 82 LSGGELFMHLER---EGIFMEDTACFYLSEISLALEHLHQ---QGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGT 155 (323)
T ss_pred CCCchHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCCEEEeeCcCCeecccCCC
Confidence 999999999843 3467888889999999999999999 8999999999999999999999999999875322211
Q ss_pred cCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCCCCC
Q 003384 619 SSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWP 698 (824)
Q Consensus 619 ~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p 698 (824)
. .....||+.|+|||++.+..++.++|||||||+||||++|++||............ .. .....|
T Consensus 156 ~--------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~------~~-~~~~~~ 220 (323)
T cd05584 156 V--------THTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKI------LK-GKLNLP 220 (323)
T ss_pred c--------ccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHH------Hc-CCCCCC
Confidence 0 12346899999999999888999999999999999999999999765443221111 00 011234
Q ss_pred hhhHHHHHHHHHHHhhhccCCCCC
Q 003384 699 FVQAEQLANLAMRCCEMSRKSRPE 722 (824)
Q Consensus 699 ~~~~~~l~~Li~~Cl~~~P~~RPt 722 (824)
...+..+.+++.+||+.+|.+||+
T Consensus 221 ~~~~~~~~~li~~~l~~~p~~R~~ 244 (323)
T cd05584 221 PYLTPEARDLLKKLLKRNPSSRLG 244 (323)
T ss_pred CCCCHHHHHHHHHHcccCHhHcCC
Confidence 455678999999999999999994
No 72
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=4.4e-36 Score=324.15 Aligned_cols=248 Identities=26% Similarity=0.351 Sum_probs=189.9
Q ss_pred CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC-CCchhHHHHHHHHHhcCCCceeeEecccC--CceEEEEEe
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEY 538 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~Ey 538 (824)
.+|...++||.|+||.||+|... +..||+|++..... .....+.+|+.+++.++||||+++++++. ...++||||
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 84 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY 84 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence 46888899999999999999875 57899999875432 22446789999999999999999999874 457899999
Q ss_pred cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccc
Q 003384 539 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEI 618 (824)
Q Consensus 539 ~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~ 618 (824)
+++ +|.+++... ...+++..+..++.|++.||.|||+ +||+||||||+|||++.++.+||+|||+++.......
T Consensus 85 ~~~-~l~~~l~~~--~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~ 158 (288)
T cd07871 85 LDS-DLKQYLDNC--GNLMSMHNVKIFMFQLLRGLSYCHK---RKILHRDLKPQNLLINEKGELKLADFGLARAKSVPTK 158 (288)
T ss_pred CCc-CHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEECcCcceeeccCCCc
Confidence 975 898888532 3457889999999999999999999 8999999999999999999999999999875432211
Q ss_pred cCCCccccccCCCCCCcccCChhhhcc-CCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhh----h---------
Q 003384 619 SSNNTTLCCRTDPKGTFAYMDPEFLAS-GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDT----G--------- 684 (824)
Q Consensus 619 ~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~----~--------- 684 (824)
. .....||+.|+|||++.+ ..++.++|||||||++|+|+||++||............ +
T Consensus 159 ~--------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (288)
T cd07871 159 T--------YSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPG 230 (288)
T ss_pred c--------ccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhc
Confidence 1 123458999999999876 56899999999999999999999999754332111000 0
Q ss_pred -----ccccccCCCCC-----CCChhhHHHHHHHHHHHhhhccCCCCChHH
Q 003384 685 -----KLKNLLDPLAG-----DWPFVQAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 685 -----~~~~~ld~~~~-----~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
.+...+.+... ......+.++.+|+.+||+.+|.+|||+.+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~ 281 (288)
T cd07871 231 ITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEA 281 (288)
T ss_pred cccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHH
Confidence 00000000000 001123467899999999999999999843
No 73
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=1.5e-36 Score=321.32 Aligned_cols=252 Identities=26% Similarity=0.493 Sum_probs=204.4
Q ss_pred cCCCCccceeeecCceEEEEEEECC-eEEEEEEecCCCCCCchhHHHHHHHHHhcCCCceeeEecccC--CceEEEEEec
Q 003384 463 THNFDPSLKIGEGGYGSIYKGLLRH-MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYL 539 (824)
Q Consensus 463 ~~~f~~~~~LG~G~fG~Vykg~~~~-~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~Ey~ 539 (824)
..+|...++||.|+||.||+|.+.+ ..+|+|++..........+..|+.+++.++||||+++++++. +..++||||+
T Consensus 5 ~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 84 (261)
T cd05148 5 REEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITELM 84 (261)
T ss_pred HHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEeec
Confidence 3468888999999999999998864 789999987765545667999999999999999999999884 4688999999
Q ss_pred CCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccccccc
Q 003384 540 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEIS 619 (824)
Q Consensus 540 ~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~ 619 (824)
++|+|.+++... ....+++..+..++.+++.||.|||+ ++|+||||||+|||++.++.+||+|||++.........
T Consensus 85 ~~~~L~~~~~~~-~~~~~~~~~~~~~~~~i~~al~~lH~---~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~ 160 (261)
T cd05148 85 EKGSLLAFLRSP-EGQVLPVASLIDMACQVAEGMAYLEE---QNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYL 160 (261)
T ss_pred ccCCHHHHHhcC-CCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccCcceEEEcCCceEEEccccchhhcCCcccc
Confidence 999999999643 23568999999999999999999999 89999999999999999999999999999865432211
Q ss_pred CCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHh-CCCCCCCchHHHHHHhhhccccccCCCCCCCC
Q 003384 620 SNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWP 698 (824)
Q Consensus 620 ~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELlt-G~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p 698 (824)
.....++..|+|||.+.+..++.++|||||||++|+|++ |+.||............ ........+
T Consensus 161 --------~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~------~~~~~~~~~ 226 (261)
T cd05148 161 --------SSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQI------TAGYRMPCP 226 (261)
T ss_pred --------ccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHH------HhCCcCCCC
Confidence 123346788999999988899999999999999999998 89999654422111111 011112234
Q ss_pred hhhHHHHHHHHHHHhhhccCCCCChHHHHHHHHHH
Q 003384 699 FVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEP 733 (824)
Q Consensus 699 ~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le~ 733 (824)
...+..+.+++.+||+.+|.+||++ .++.+.|+.
T Consensus 227 ~~~~~~~~~~i~~~l~~~p~~Rpt~-~~l~~~L~~ 260 (261)
T cd05148 227 AKCPQEIYKIMLECWAAEPEDRPSF-KALREELDN 260 (261)
T ss_pred CCCCHHHHHHHHHHcCCCchhCcCH-HHHHHHHhc
Confidence 4556789999999999999999999 677777764
No 74
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=5.7e-36 Score=317.69 Aligned_cols=244 Identities=25% Similarity=0.459 Sum_probs=194.0
Q ss_pred eeeecCceEEEEEEEC----CeEEEEEEecCCCCC-CchhHHHHHHHHHhcCCCceeeEecccC-CceEEEEEecCCCCh
Q 003384 471 KIGEGGYGSIYKGLLR----HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACP-EVWTLVYEYLPNGSL 544 (824)
Q Consensus 471 ~LG~G~fG~Vykg~~~----~~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIv~L~g~~~-~~~~LV~Ey~~ggsL 544 (824)
.||+|+||.||+|.+. +..||+|++...... ....|.+|+.++++++||||++++|+|. +..++||||+++|+|
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~lv~e~~~~~~L 81 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEAEALMLVMEMASGGPL 81 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcCCCeEEEEEeCCCCCH
Confidence 3899999999999874 346999998765322 2356889999999999999999999984 467899999999999
Q ss_pred hhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccccCCCcc
Q 003384 545 EDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTT 624 (824)
Q Consensus 545 ~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~~~~~~ 624 (824)
.+++... ...+++..+..++.+++.||.|||. ++++||||||+|||++.++.+||+|||++..+........
T Consensus 82 ~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~--- 153 (257)
T cd05115 82 NKFLSGK--KDEITVSNVVELMHQVSMGMKYLEG---KNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYK--- 153 (257)
T ss_pred HHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHh---cCeeecccchheEEEcCCCcEEeccCCccccccCCcccee---
Confidence 9998532 3468999999999999999999999 8999999999999999999999999999986543321111
Q ss_pred ccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHh-CCCCCCCchHHH--HHHhhhccccccCCCCCCCChhh
Q 003384 625 LCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQ--YALDTGKLKNLLDPLAGDWPFVQ 701 (824)
Q Consensus 625 ~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELlt-G~~Pf~~~~~~~--~~~~~~~~~~~ld~~~~~~p~~~ 701 (824)
......+++.|+|||++.+..++.++|||||||++|+|++ |.+||....... ..+..+ .....+...
T Consensus 154 --~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~--------~~~~~~~~~ 223 (257)
T cd05115 154 --ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQG--------KRLDCPAEC 223 (257)
T ss_pred --ccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCC--------CCCCCCCCC
Confidence 0122335678999999988889999999999999999996 999996543322 111111 112234456
Q ss_pred HHHHHHHHHHHhhhccCCCCChHHHHHHHHHH
Q 003384 702 AEQLANLAMRCCEMSRKSRPELGKDVWRVLEP 733 (824)
Q Consensus 702 ~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le~ 733 (824)
+..+.+++.+||..+|++||++ ..|.+.|+.
T Consensus 224 ~~~l~~li~~c~~~~~~~Rp~~-~~i~~~l~~ 254 (257)
T cd05115 224 PPEMYALMKDCWIYKWEDRPNF-AKVEERMRT 254 (257)
T ss_pred CHHHHHHHHHHcCCChhhCcCH-HHHHHHHhh
Confidence 7799999999999999999999 667666653
No 75
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=1.2e-36 Score=334.34 Aligned_cols=239 Identities=23% Similarity=0.291 Sum_probs=191.3
Q ss_pred CCCccceeeecCceEEEEEEECC--eEEEEEEecCCC---CCCchhHHHHHHHHHhcCCC-ceeeEeccc--CCceEEEE
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHS---LQGPSEFQQEIDILSKIRHP-NLVTLVGAC--PEVWTLVY 536 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~~--~~VAvK~l~~~~---~~~~~~f~~Ei~iL~~l~Hp-nIv~L~g~~--~~~~~LV~ 536 (824)
+|...+.||+|+||.||+|...+ ..||||++.... ......+..|+.++..+.|+ +|+++++++ .+..++||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 47788899999999999998864 689999987532 22345678899999999765 577888877 45689999
Q ss_pred EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccc
Q 003384 537 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQN 616 (824)
Q Consensus 537 Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~ 616 (824)
||++||+|.+++.. ...+++..+..++.|++.||.|||. ++|+||||||+|||++.++.+||+|||++......
T Consensus 81 E~~~~g~L~~~~~~---~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~ 154 (324)
T cd05587 81 EYVNGGDLMYHIQQ---VGKFKEPHAVFYAAEIAIGLFFLHS---KGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFG 154 (324)
T ss_pred cCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEEcCCCCEEEeecCcceecCCC
Confidence 99999999998843 3468899999999999999999999 89999999999999999999999999998743211
Q ss_pred cccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCCC
Q 003384 617 EISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGD 696 (824)
Q Consensus 617 ~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~ 696 (824)
... .....||+.|+|||++.+..++.++|||||||++|+|+||++||............. .....
T Consensus 155 ~~~--------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~-------~~~~~ 219 (324)
T cd05587 155 GKT--------TRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIM-------EHNVS 219 (324)
T ss_pred CCc--------eeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHH-------cCCCC
Confidence 100 123458999999999999999999999999999999999999997654332211110 11123
Q ss_pred CChhhHHHHHHHHHHHhhhccCCCCChH
Q 003384 697 WPFVQAEQLANLAMRCCEMSRKSRPELG 724 (824)
Q Consensus 697 ~p~~~~~~l~~Li~~Cl~~~P~~RPt~~ 724 (824)
+|...+..+.+++.+||..+|.+||+..
T Consensus 220 ~~~~~~~~~~~li~~~l~~~P~~R~~~~ 247 (324)
T cd05587 220 YPKSLSKEAVSICKGLLTKHPAKRLGCG 247 (324)
T ss_pred CCCCCCHHHHHHHHHHhhcCHHHcCCCC
Confidence 3445667899999999999999999863
No 76
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=2.6e-36 Score=339.56 Aligned_cols=252 Identities=23% Similarity=0.308 Sum_probs=190.6
Q ss_pred CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCC---CchhHHHHHHHHHhcCCCceeeEecccC--CceEEEEE
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ---GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYE 537 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~---~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~E 537 (824)
.|...+.||+|+||+||+|... +..||||++...... ....+.+|+.+++.++||||+++++++. +..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 5788899999999999999875 478999999754322 2346889999999999999999999984 46889999
Q ss_pred ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccccc
Q 003384 538 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNE 617 (824)
Q Consensus 538 y~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~ 617 (824)
|++||+|.+++.. ...+++.....++.|++.||.|||. .||+||||||+||||+.++++||+|||++..+....
T Consensus 82 ~~~gg~L~~~l~~---~~~~~e~~~~~~~~qi~~aL~~LH~---~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~ 155 (381)
T cd05626 82 YIPGGDMMSLLIR---MEVFPEVLARFYIAELTLAIESVHK---MGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTH 155 (381)
T ss_pred cCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCcHHHEEECCCCCEEEeeCcCCccccccc
Confidence 9999999999853 3458888999999999999999999 899999999999999999999999999986442111
Q ss_pred ccCC---------------------------------------CccccccCCCCCCcccCChhhhccCCCCcchhHHhHH
Q 003384 618 ISSN---------------------------------------NTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFG 658 (824)
Q Consensus 618 ~~~~---------------------------------------~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlG 658 (824)
.... ....+......||+.|+|||++.+..++.++||||||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG 235 (381)
T cd05626 156 NSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVG 235 (381)
T ss_pred ccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehh
Confidence 0000 0000001235799999999999988999999999999
Q ss_pred HHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCCCCChhhHHHHHHHHHH--HhhhccCCCCChHH
Q 003384 659 IILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMR--CCEMSRKSRPELGK 725 (824)
Q Consensus 659 vvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~--Cl~~~P~~RPt~~~ 725 (824)
|++|||+||++||..................+ ........+.++.+|+.+ |+..+|..||++.+
T Consensus 236 ~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~---~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~ 301 (381)
T cd05626 236 VILFEMLVGQPPFLAPTPTETQLKVINWENTL---HIPPQVKLSPEAVDLITKLCCSAEERLGRNGADD 301 (381)
T ss_pred hHHHHHHhCCCCCcCCCHHHHHHHHHcccccc---CCCCCCCCCHHHHHHHHHHccCcccccCCCCHHH
Confidence 99999999999997654332221111111100 111112345678889988 44556666999843
No 77
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=1.6e-36 Score=333.48 Aligned_cols=236 Identities=22% Similarity=0.268 Sum_probs=188.1
Q ss_pred CCccceeeecCceEEEEEEEC--CeEEEEEEecCCC---CCCchhHHHHHHHH---HhcCCCceeeEecccC--CceEEE
Q 003384 466 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS---LQGPSEFQQEIDIL---SKIRHPNLVTLVGACP--EVWTLV 535 (824)
Q Consensus 466 f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~---~~~~~~f~~Ei~iL---~~l~HpnIv~L~g~~~--~~~~LV 535 (824)
|.+.+.||+|+||.||+|.+. +..||||++.... ......+.+|+.++ +.++||||+++++++. +..++|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 566788999999999999875 5789999987532 12234566777665 4668999999999884 568999
Q ss_pred EEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccc
Q 003384 536 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQ 615 (824)
Q Consensus 536 ~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~ 615 (824)
|||++||+|..++. ...+++..+..++.+++.||.|||+ +||+||||||+|||++.++.+||+|||+++....
T Consensus 81 ~E~~~~~~L~~~~~----~~~l~~~~~~~~~~qi~~al~~lH~---~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~ 153 (324)
T cd05589 81 MEYAAGGDLMMHIH----TDVFSEPRAVFYAACVVLGLQYLHE---NKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMG 153 (324)
T ss_pred EcCCCCCcHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEecCCCHHHeEECCCCcEEeCcccCCccCCC
Confidence 99999999998873 2468999999999999999999999 8999999999999999999999999999874322
Q ss_pred ccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCC
Q 003384 616 NEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAG 695 (824)
Q Consensus 616 ~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~ 695 (824)
... ......||+.|+|||++.+..++.++|||||||++|+|++|++||.............. ...
T Consensus 154 ~~~--------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~-------~~~ 218 (324)
T cd05589 154 FGD--------RTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVN-------DEV 218 (324)
T ss_pred CCC--------cccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHh-------CCC
Confidence 110 01335699999999999999999999999999999999999999976543221111100 011
Q ss_pred CCChhhHHHHHHHHHHHhhhccCCCCCh
Q 003384 696 DWPFVQAEQLANLAMRCCEMSRKSRPEL 723 (824)
Q Consensus 696 ~~p~~~~~~l~~Li~~Cl~~~P~~RPt~ 723 (824)
..|...+..+.+++.+||+.+|.+||+.
T Consensus 219 ~~p~~~~~~~~~li~~~L~~dP~~R~~~ 246 (324)
T cd05589 219 RYPRFLSREAISIMRRLLRRNPERRLGS 246 (324)
T ss_pred CCCCCCCHHHHHHHHHHhhcCHhHcCCC
Confidence 2344456789999999999999999975
No 78
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=4.9e-36 Score=318.84 Aligned_cols=253 Identities=28% Similarity=0.444 Sum_probs=200.1
Q ss_pred CCCCccceeeecCceEEEEEEEC-----CeEEEEEEecCCCCC-CchhHHHHHHHHHhcCCCceeeEecccC--CceEEE
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLLR-----HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLV 535 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~~-----~~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV 535 (824)
.+|...+.||+|+||.||+|.+. ...||||.+...... ....|.+|+.+++.++||||+++++++. +..++|
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv 83 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMII 83 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEE
Confidence 46888899999999999999874 247999998754322 2346889999999999999999999873 467899
Q ss_pred EEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccc
Q 003384 536 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQ 615 (824)
Q Consensus 536 ~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~ 615 (824)
|||+++|+|.+++... ...+++..++.++.+++.||.|||+ ++|+||||||+|||++.++.+||+|||++..+..
T Consensus 84 ~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~Lh~---~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 158 (266)
T cd05033 84 TEYMENGSLDKFLREN--DGKFTVGQLVGMLRGIASGMKYLSE---MNYVHRDLAARNILVNSNLVCKVSDFGLSRRLED 158 (266)
T ss_pred EEcCCCCCHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcCCCCEEECccchhhcccc
Confidence 9999999999998533 3468999999999999999999999 8999999999999999999999999999987752
Q ss_pred ccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHh-CCCCCCCchHHHHHHhhhccccccCCCC
Q 003384 616 NEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLA 694 (824)
Q Consensus 616 ~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELlt-G~~Pf~~~~~~~~~~~~~~~~~~ld~~~ 694 (824)
..... . .....+++.|+|||.+.+..++.++||||||+++|+|++ |..||............. ....
T Consensus 159 ~~~~~--~----~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~------~~~~ 226 (266)
T cd05033 159 SEATY--T----TKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVE------DGYR 226 (266)
T ss_pred cccce--e----ccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH------cCCC
Confidence 11110 0 012345788999999998899999999999999999998 999996443222111110 1111
Q ss_pred CCCChhhHHHHHHHHHHHhhhccCCCCChHHHHHHHHHHH
Q 003384 695 GDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM 734 (824)
Q Consensus 695 ~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le~l 734 (824)
...+...+..+.+++.+|++.+|.+||++ +++.+.|+.+
T Consensus 227 ~~~~~~~~~~l~~li~~cl~~~p~~Rp~~-~ei~~~l~~~ 265 (266)
T cd05033 227 LPPPMDCPSALYQLMLDCWQKDRNERPTF-SQIVSTLDKM 265 (266)
T ss_pred CCCCCCCCHHHHHHHHHHcCCCcccCcCH-HHHHHHHHhh
Confidence 12234456789999999999999999999 7777777653
No 79
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=4.6e-36 Score=319.53 Aligned_cols=249 Identities=26% Similarity=0.399 Sum_probs=194.3
Q ss_pred CccceeeecCceEEEEEEECC----eEEEEEEecCCCC--CCchhHHHHHHHHHhcCCCceeeEecccC--------Cce
Q 003384 467 DPSLKIGEGGYGSIYKGLLRH----MQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVGACP--------EVW 532 (824)
Q Consensus 467 ~~~~~LG~G~fG~Vykg~~~~----~~VAvK~l~~~~~--~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--------~~~ 532 (824)
.+.+.||+|+||.||+|.+.. ..||+|.+..... .....+.+|+.+++.++||||++++++|. ...
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 81 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSP 81 (272)
T ss_pred ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCc
Confidence 456789999999999998763 2699998875422 22456889999999999999999999762 135
Q ss_pred EEEEEecCCCChhhhhhcc---CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccc
Q 003384 533 TLVYEYLPNGSLEDRLSCK---DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGI 609 (824)
Q Consensus 533 ~LV~Ey~~ggsL~~~L~~~---~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGl 609 (824)
++||||+++|+|.+++... .....+++.....++.|++.||.|||. ++|+||||||+|||++.++.+||+|||+
T Consensus 82 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~ 158 (272)
T cd05075 82 VVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSS---KSFIHRDLAARNCMLNENMNVCVADFGL 158 (272)
T ss_pred EEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHH---CCeeccccchhheEEcCCCCEEECCCCc
Confidence 7999999999999887422 223458999999999999999999999 8999999999999999999999999999
Q ss_pred ccccccccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHh-CCCCCCCchHHH--HHHhhhcc
Q 003384 610 SRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQ--YALDTGKL 686 (824)
Q Consensus 610 a~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELlt-G~~Pf~~~~~~~--~~~~~~~~ 686 (824)
++.+........ .....+++.|+|||++.+..++.++|||||||++|||++ |++||....... ..+..+..
T Consensus 159 ~~~~~~~~~~~~------~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~ 232 (272)
T cd05075 159 SKKIYNGDYYRQ------GRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQGNR 232 (272)
T ss_pred ccccCcccceec------CCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCC
Confidence 987643321110 012346778999999999999999999999999999999 899996543321 11111111
Q ss_pred ccccCCCCCCCChhhHHHHHHHHHHHhhhccCCCCChHHHHHHHHHH
Q 003384 687 KNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEP 733 (824)
Q Consensus 687 ~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le~ 733 (824)
...+...+..+.+++.+||+.+|.+||++ .++.+.|+.
T Consensus 233 --------~~~~~~~~~~~~~li~~~l~~~p~~Rps~-~~l~~~l~~ 270 (272)
T cd05075 233 --------LKQPPDCLDGLYSLMSSCWLLNPKDRPSF-ETLRCELEK 270 (272)
T ss_pred --------CCCCCCCCHHHHHHHHHHcCCCcccCcCH-HHHHHHHHh
Confidence 11223445679999999999999999999 677777664
No 80
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=2.1e-36 Score=332.36 Aligned_cols=238 Identities=21% Similarity=0.295 Sum_probs=191.3
Q ss_pred CCCccceeeecCceEEEEEEECC--eEEEEEEecCCCC---CCchhHHHHHHHHHhc-CCCceeeEecccC--CceEEEE
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSL---QGPSEFQQEIDILSKI-RHPNLVTLVGACP--EVWTLVY 536 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~~--~~VAvK~l~~~~~---~~~~~f~~Ei~iL~~l-~HpnIv~L~g~~~--~~~~LV~ 536 (824)
+|...+.||+|+||.||+|...+ ..||||++..... .....+..|..++..+ +||+|+++++++. +..++||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 47788899999999999998864 6899999875422 2233567788888877 5899999998874 4688999
Q ss_pred EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccc
Q 003384 537 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQN 616 (824)
Q Consensus 537 Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~ 616 (824)
||+++|+|.+.+.. ...+++..+..++.|++.||.|||+ ++|+||||||+|||++.++.+||+|||+++.....
T Consensus 81 E~~~~g~L~~~~~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~ 154 (323)
T cd05616 81 EYVNGGDLMYQIQQ---VGRFKEPHAVFYAAEIAIGLFFLHS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWD 154 (323)
T ss_pred cCCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCEEecCCCHHHeEECCCCcEEEccCCCceecCCC
Confidence 99999999998843 3458899999999999999999999 89999999999999999999999999998753321
Q ss_pred cccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCCC
Q 003384 617 EISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGD 696 (824)
Q Consensus 617 ~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~ 696 (824)
... .....||+.|+|||++.+..++.++|||||||++|||+||++||............. .....
T Consensus 155 ~~~--------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~-------~~~~~ 219 (323)
T cd05616 155 GVT--------TKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIM-------EHNVA 219 (323)
T ss_pred CCc--------cccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHH-------hCCCC
Confidence 111 123468999999999999999999999999999999999999997654332211110 01122
Q ss_pred CChhhHHHHHHHHHHHhhhccCCCCCh
Q 003384 697 WPFVQAEQLANLAMRCCEMSRKSRPEL 723 (824)
Q Consensus 697 ~p~~~~~~l~~Li~~Cl~~~P~~RPt~ 723 (824)
+|...+..+.+++.+|++.+|.+|++.
T Consensus 220 ~p~~~s~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 220 YPKSMSKEAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred CCCcCCHHHHHHHHHHcccCHHhcCCC
Confidence 345567789999999999999999985
No 81
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=4.1e-36 Score=322.65 Aligned_cols=250 Identities=27% Similarity=0.427 Sum_probs=195.9
Q ss_pred CCCccceeeecCceEEEEEEE------CCeEEEEEEecCCCC-CCchhHHHHHHHHHhcCCCceeeEecccC--CceEEE
Q 003384 465 NFDPSLKIGEGGYGSIYKGLL------RHMQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLV 535 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~------~~~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV 535 (824)
.|+..+.||+|+||.||+|.+ .+..||+|.+..... .....|.+|+.+++.++||||+++++++. +..++|
T Consensus 6 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 85 (283)
T cd05090 6 AVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCML 85 (283)
T ss_pred hceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEEE
Confidence 467778999999999999975 236799999875332 12346889999999999999999999873 468899
Q ss_pred EEecCCCChhhhhhccC--------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCc
Q 003384 536 YEYLPNGSLEDRLSCKD--------------NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFV 601 (824)
Q Consensus 536 ~Ey~~ggsL~~~L~~~~--------------~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~ 601 (824)
|||+++|+|.+++.... ....+++...+.++.+++.||.|||+ ++++||||||+|||++.++.
T Consensus 86 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~---~~i~H~dlkp~nili~~~~~ 162 (283)
T cd05090 86 FEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSS---HFFVHKDLAARNILIGEQLH 162 (283)
T ss_pred EEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHh---cCeehhccccceEEEcCCCc
Confidence 99999999999985321 12357888999999999999999999 89999999999999999999
Q ss_pred ceeeccccccccccccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHh-CCCCCCCchHH--H
Q 003384 602 SKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEV--Q 678 (824)
Q Consensus 602 vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELlt-G~~Pf~~~~~~--~ 678 (824)
+||+|||+++.......... .....++..|+|||++.+..++.++|||||||++|||++ |.+||...... .
T Consensus 163 ~kl~dfg~~~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~ 236 (283)
T cd05090 163 VKISDLGLSREIYSADYYRV------QPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVI 236 (283)
T ss_pred EEeccccccccccCCcceec------ccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHH
Confidence 99999999986543321111 122346788999999988889999999999999999998 99999654321 1
Q ss_pred HHHhhhccccccCCCCCCCChhhHHHHHHHHHHHhhhccCCCCChHHHHHHHHH
Q 003384 679 YALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLE 732 (824)
Q Consensus 679 ~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le 732 (824)
.....+. ....+...+..+.+++.+||+.+|.+||++ ..+.+.|.
T Consensus 237 ~~~~~~~--------~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~-~~i~~~l~ 281 (283)
T cd05090 237 EMVRKRQ--------LLPCSEDCPPRMYSLMTECWQEGPSRRPRF-KDIHTRLR 281 (283)
T ss_pred HHHHcCC--------cCCCCCCCCHHHHHHHHHHcccCcccCcCH-HHHHHHhh
Confidence 1111111 112233456789999999999999999999 55655553
No 82
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=5e-36 Score=321.86 Aligned_cols=260 Identities=27% Similarity=0.412 Sum_probs=198.4
Q ss_pred CCCCccceeeecCceEEEEEEEC------CeEEEEEEecCCCCCCchhHHHHHHHHHhcCCCceeeEecccC----CceE
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLLR------HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP----EVWT 533 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~~------~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~----~~~~ 533 (824)
.+|...+.||+|+||.||+|.+. +..||||.+..........|.+|+++++.++||||+++++++. ...+
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 83 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR 83 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence 46788889999999999999752 4689999987654444567899999999999999999999762 3578
Q ss_pred EEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccc
Q 003384 534 LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFL 613 (824)
Q Consensus 534 LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~ 613 (824)
+||||+++|+|.+++... ...+++..+..++.+++.||.|||. +||+||||||+|||++.++.+||+|||++...
T Consensus 84 lv~e~~~~~~L~~~l~~~--~~~l~~~~~~~~~~~l~~aL~~LH~---~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~ 158 (284)
T cd05081 84 LVMEYLPYGSLRDYLQKH--RERLDHRKLLLYASQICKGMEYLGS---KRYVHRDLATRNILVESENRVKIGDFGLTKVL 158 (284)
T ss_pred EEEEecCCCCHHHHHHhc--CcCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCCHhhEEECCCCeEEECCCcccccc
Confidence 999999999999998532 3458999999999999999999999 89999999999999999999999999999876
Q ss_pred ccccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHH-HHHhhhc-------
Q 003384 614 SQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQ-YALDTGK------- 685 (824)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~-~~~~~~~------- 685 (824)
........ ......++..|+|||++.+..++.++|||||||++|||++|..|+....... ..+....
T Consensus 159 ~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (284)
T cd05081 159 PQDKEYYK-----VREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVY 233 (284)
T ss_pred cCCCccee-----ecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchH
Confidence 43321100 0112234567999999998899999999999999999999987764332111 0000000
Q ss_pred -cccccC-CCCCCCChhhHHHHHHHHHHHhhhccCCCCChHHHHHHHHHHH
Q 003384 686 -LKNLLD-PLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM 734 (824)
Q Consensus 686 -~~~~ld-~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le~l 734 (824)
+...+. ......+...+..+.+|+.+||..+|.+||++ +++...|+.+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~-~ei~~~l~~~ 283 (284)
T cd05081 234 HLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSF-SELALQVEAI 283 (284)
T ss_pred HHHHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCH-HHHHHHHHhc
Confidence 000010 11111233456789999999999999999999 7777777654
No 83
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=3.3e-36 Score=349.75 Aligned_cols=255 Identities=20% Similarity=0.268 Sum_probs=202.3
Q ss_pred hhHhhhcCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCC--CchhHHHHHHHHHhcCCCceeeEecccCC--
Q 003384 457 SEIEGATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPNLVTLVGACPE-- 530 (824)
Q Consensus 457 ~ei~~~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~--~~~~f~~Ei~iL~~l~HpnIv~L~g~~~~-- 530 (824)
.++.....+|.+.+.||+|+||.||+|... +..||||++...... ....+.+|+.++..++|+||+++++.+..
T Consensus 25 ~~~~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~ 104 (496)
T PTZ00283 25 ATAKEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKD 104 (496)
T ss_pred ccccccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceeccc
Confidence 344455679999999999999999999864 689999998764332 23457889999999999999999876521
Q ss_pred --------ceEEEEEecCCCChhhhhhcc-CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCc
Q 003384 531 --------VWTLVYEYLPNGSLEDRLSCK-DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFV 601 (824)
Q Consensus 531 --------~~~LV~Ey~~ggsL~~~L~~~-~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~ 601 (824)
..++||||+++|+|.++|... ....++++..+..++.|++.||.|||+ ++|+||||||+||||+.++.
T Consensus 105 ~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~---~~IiHrDLKP~NILl~~~~~ 181 (496)
T PTZ00283 105 PRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHS---KHMIHRDIKSANILLCSNGL 181 (496)
T ss_pred ccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEeCCCC
Confidence 257999999999999998543 234578999999999999999999999 89999999999999999999
Q ss_pred ceeeccccccccccccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHH
Q 003384 602 SKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYAL 681 (824)
Q Consensus 602 vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~ 681 (824)
+||+|||+++.+........ .....||+.|+|||++.+..++.++|||||||+||||++|++||.........
T Consensus 182 vkL~DFGls~~~~~~~~~~~------~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~- 254 (496)
T PTZ00283 182 VKLGDFGFSKMYAATVSDDV------GRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVM- 254 (496)
T ss_pred EEEEecccCeeccccccccc------cccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH-
Confidence 99999999986643221111 13356999999999999999999999999999999999999999765432211
Q ss_pred hhhccccccCCCCCCCChhhHHHHHHHHHHHhhhccCCCCChHHH
Q 003384 682 DTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKD 726 (824)
Q Consensus 682 ~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~ 726 (824)
. ....... ...|...+..+.+++.+||+.+|.+||++.+.
T Consensus 255 ~-~~~~~~~----~~~~~~~~~~l~~li~~~L~~dP~~RPs~~el 294 (496)
T PTZ00283 255 H-KTLAGRY----DPLPPSISPEMQEIVTALLSSDPKRRPSSSKL 294 (496)
T ss_pred H-HHhcCCC----CCCCCCCCHHHHHHHHHHcccChhhCcCHHHH
Confidence 1 1111111 12344556789999999999999999999544
No 84
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.8e-37 Score=309.75 Aligned_cols=242 Identities=25% Similarity=0.424 Sum_probs=200.5
Q ss_pred cCCCCccceeeecCceEEEEEEECC--eEEEEEEecCCCC---CCchhHHHHHHHHHhcCCCceeeEecccCC--ceEEE
Q 003384 463 THNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSL---QGPSEFQQEIDILSKIRHPNLVTLVGACPE--VWTLV 535 (824)
Q Consensus 463 ~~~f~~~~~LG~G~fG~Vykg~~~~--~~VAvK~l~~~~~---~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~~--~~~LV 535 (824)
-++|+.++.||+|-||.||.|+.+. .-||+|++.+... ....++.+|++|-+.|+||||+++||+|-+ ..||+
T Consensus 21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLi 100 (281)
T KOG0580|consen 21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLI 100 (281)
T ss_pred hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEE
Confidence 3468999999999999999998874 5699999876532 234579999999999999999999999944 68999
Q ss_pred EEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccc
Q 003384 536 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQ 615 (824)
Q Consensus 536 ~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~ 615 (824)
+||.++|+|...|... ....++......++.|+|.||.|+|. ++||||||||+|+|++..+.+||+|||-+.....
T Consensus 101 lEya~~gel~k~L~~~-~~~~f~e~~~a~Yi~q~A~Al~y~h~---k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p~ 176 (281)
T KOG0580|consen 101 LEYAPRGELYKDLQEG-RMKRFDEQRAATYIKQLANALLYCHL---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS 176 (281)
T ss_pred EEecCCchHHHHHHhc-ccccccccchhHHHHHHHHHHHHhcc---CCcccCCCCHHHhccCCCCCeeccCCCceeecCC
Confidence 9999999999999533 34568888899999999999999999 8899999999999999999999999998765431
Q ss_pred ccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCC
Q 003384 616 NEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAG 695 (824)
Q Consensus 616 ~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~ 695 (824)
.. +....||..|.+||...+..++..+|+|++|++.||++.|.|||.....-.. +. -+.....
T Consensus 177 ----~k------R~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~et-Yk------rI~k~~~ 239 (281)
T KOG0580|consen 177 ----NK------RKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSET-YK------RIRKVDL 239 (281)
T ss_pred ----CC------ceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHH-HH------HHHHccc
Confidence 11 2345699999999999999999999999999999999999999975442221 11 1111222
Q ss_pred CCChhhHHHHHHHHHHHhhhccCCCCChHH
Q 003384 696 DWPFVQAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 696 ~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
.+|...+....++|.+|+..+|.+|....+
T Consensus 240 ~~p~~is~~a~dlI~~ll~~~p~~r~~l~~ 269 (281)
T KOG0580|consen 240 KFPSTISGGAADLISRLLVKNPIERLALTE 269 (281)
T ss_pred cCCcccChhHHHHHHHHhccCccccccHHH
Confidence 345667789999999999999999999843
No 85
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=3.7e-36 Score=329.75 Aligned_cols=237 Identities=25% Similarity=0.328 Sum_probs=188.0
Q ss_pred ceeeecCceEEEEEEEC--CeEEEEEEecCCC---CCCchhHHHHHHHHHhc-CCCceeeEecccC--CceEEEEEecCC
Q 003384 470 LKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS---LQGPSEFQQEIDILSKI-RHPNLVTLVGACP--EVWTLVYEYLPN 541 (824)
Q Consensus 470 ~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~---~~~~~~f~~Ei~iL~~l-~HpnIv~L~g~~~--~~~~LV~Ey~~g 541 (824)
+.||+|+||+||+|... +..||||++.... ......+..|..++..+ +||||+++++++. +..++||||++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 36999999999999886 4689999987542 12234567788888764 8999999999884 468899999999
Q ss_pred CChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccccCC
Q 003384 542 GSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSN 621 (824)
Q Consensus 542 gsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~~~ 621 (824)
|+|.+++.. ...+++.....++.|++.||.|||+ ++|+||||||+|||++.++.+||+|||+++........
T Consensus 81 g~L~~~l~~---~~~~~~~~~~~~~~qi~~al~~LH~---~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-- 152 (316)
T cd05619 81 GDLMFHIQS---CHKFDLPRATFYAAEIICGLQFLHS---KGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAK-- 152 (316)
T ss_pred CcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCc--
Confidence 999999843 3468899999999999999999999 89999999999999999999999999998743221110
Q ss_pred CccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCCCCChhh
Q 003384 622 NTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQ 701 (824)
Q Consensus 622 ~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~ 701 (824)
.....||+.|+|||++.+..++.++|||||||++|+|++|+.||............. . ....+|...
T Consensus 153 ------~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~-~------~~~~~~~~~ 219 (316)
T cd05619 153 ------TCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIR-M------DNPCYPRWL 219 (316)
T ss_pred ------eeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHH-h------CCCCCCccC
Confidence 123458999999999999899999999999999999999999997654322111110 0 011223345
Q ss_pred HHHHHHHHHHHhhhccCCCCChHHHH
Q 003384 702 AEQLANLAMRCCEMSRKSRPELGKDV 727 (824)
Q Consensus 702 ~~~l~~Li~~Cl~~~P~~RPt~~~~v 727 (824)
+..+.+++.+||+.+|.+||++..++
T Consensus 220 ~~~~~~li~~~l~~~P~~R~~~~~~l 245 (316)
T cd05619 220 TREAKDILVKLFVREPERRLGVKGDI 245 (316)
T ss_pred CHHHHHHHHHHhccCHhhcCCChHHH
Confidence 67899999999999999999985344
No 86
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=5.9e-36 Score=318.21 Aligned_cols=253 Identities=23% Similarity=0.373 Sum_probs=198.0
Q ss_pred CCccceeeecCceEEEEEEECC-----eEEEEEEecCCCCC--CchhHHHHHHHHHhcCCCceeeEecccCC--------
Q 003384 466 FDPSLKIGEGGYGSIYKGLLRH-----MQVAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPNLVTLVGACPE-------- 530 (824)
Q Consensus 466 f~~~~~LG~G~fG~Vykg~~~~-----~~VAvK~l~~~~~~--~~~~f~~Ei~iL~~l~HpnIv~L~g~~~~-------- 530 (824)
|.+.+.||+|+||.||+|.... ..||||.+...... ....+.+|+.+++.++||||+++++++..
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 4567789999999999998642 56999998754322 23468899999999999999999997621
Q ss_pred ceEEEEEecCCCChhhhhhccC---CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecc
Q 003384 531 VWTLVYEYLPNGSLEDRLSCKD---NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF 607 (824)
Q Consensus 531 ~~~LV~Ey~~ggsL~~~L~~~~---~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DF 607 (824)
..++||||+++|+|..++.... ....+++.....++.|++.||.|||. ++++||||||+|||++.++.+||+||
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~df 157 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSN---RNFIHRDLAARNCMLREDMTVCVADF 157 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHh---CCeeccccchheEEECCCCeEEECCc
Confidence 2689999999999999885432 23468999999999999999999999 89999999999999999999999999
Q ss_pred ccccccccccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHh-CCCCCCCchHHHHHHhhhcc
Q 003384 608 GISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKL 686 (824)
Q Consensus 608 Gla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELlt-G~~Pf~~~~~~~~~~~~~~~ 686 (824)
|+++.+........ .....++..|+|||++.+..++.++|||||||++|||++ |.+||............
T Consensus 158 g~~~~~~~~~~~~~------~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~--- 228 (273)
T cd05035 158 GLSKKIYSGDYYRQ------GRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYL--- 228 (273)
T ss_pred cceeeccccccccc------cccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH---
Confidence 99986643322110 112235778999999988889999999999999999999 99999765432211111
Q ss_pred ccccCCCCCCCChhhHHHHHHHHHHHhhhccCCCCChHHHHHHHHHHH
Q 003384 687 KNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM 734 (824)
Q Consensus 687 ~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le~l 734 (824)
........+...+..+.+++.+||+.+|.+||++ .++.+.|+.+
T Consensus 229 ---~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~-~e~~~~l~~~ 272 (273)
T cd05035 229 ---RHGNRLKQPEDCLDELYDLMYSCWRADPKDRPTF-TKLREVLENI 272 (273)
T ss_pred ---HcCCCCCCCcCCCHHHHHHHHHHcCCChhhCcCH-HHHHHHHHhh
Confidence 1111112344556789999999999999999999 6777777653
No 87
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=5.7e-36 Score=317.28 Aligned_cols=247 Identities=26% Similarity=0.459 Sum_probs=196.3
Q ss_pred CCCccceeeecCceEEEEEEECC-eEEEEEEecCCCCCCchhHHHHHHHHHhcCCCceeeEecccC--CceEEEEEecCC
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLRH-MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYLPN 541 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~~-~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~Ey~~g 541 (824)
+|...+.||+|+||.||+|.+.+ ..||||.+.... .....|.+|+.++++++||||++++++|. +..++||||+.+
T Consensus 5 ~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 83 (256)
T cd05113 5 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSN 83 (256)
T ss_pred HeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCCC
Confidence 46778899999999999998875 469999887543 33567999999999999999999999884 357899999999
Q ss_pred CChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccccCC
Q 003384 542 GSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSN 621 (824)
Q Consensus 542 gsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~~~ 621 (824)
|+|.+++... ...+++..++.++.+++.||.|||+ ++++|+||||.|||++.++.+||+|||+++.........
T Consensus 84 ~~l~~~i~~~--~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~- 157 (256)
T cd05113 84 GCLLNYLREH--GKRFQPSQLLEMCKDVCEGMAYLES---KQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTS- 157 (256)
T ss_pred CcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccccCcceEEEcCCCCEEECCCccceecCCCceee-
Confidence 9999998533 2368999999999999999999999 899999999999999999999999999988654322110
Q ss_pred CccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHh-CCCCCCCchHHHHHHhhhccccccCCCCCCCChh
Q 003384 622 NTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWPFV 700 (824)
Q Consensus 622 ~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELlt-G~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~ 700 (824)
.....++..|+|||++.+..++.++|||||||++|+|+| |..||............. .......+..
T Consensus 158 ------~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~------~~~~~~~~~~ 225 (256)
T cd05113 158 ------SVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVS------QGLRLYRPHL 225 (256)
T ss_pred ------cCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHh------cCCCCCCCCC
Confidence 122346788999999988889999999999999999999 999997544322111110 0011112333
Q ss_pred hHHHHHHHHHHHhhhccCCCCChHHHHHHHH
Q 003384 701 QAEQLANLAMRCCEMSRKSRPELGKDVWRVL 731 (824)
Q Consensus 701 ~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~L 731 (824)
.+..+.+++.+||+.+|.+||++ .+++..|
T Consensus 226 ~~~~~~~li~~cl~~~p~~Rp~~-~~ll~~~ 255 (256)
T cd05113 226 ASEKVYAIMYSCWHEKAEERPTF-QQLLSSI 255 (256)
T ss_pred CCHHHHHHHHHHcCCCcccCCCH-HHHHHhh
Confidence 46789999999999999999999 5554443
No 88
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=2.2e-36 Score=325.09 Aligned_cols=236 Identities=23% Similarity=0.321 Sum_probs=188.0
Q ss_pred eeecCceEEEEEEEC--CeEEEEEEecCCCCC---CchhHHHHHHHHHhcCCCceeeEecccC--CceEEEEEecCCCCh
Q 003384 472 IGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ---GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYLPNGSL 544 (824)
Q Consensus 472 LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~---~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~Ey~~ggsL 544 (824)
||+|+||+||++... +..||+|.+...... ....+..|+.+++.++||||+++++++. ...++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 799999999999875 578999998653222 2245778999999999999999998874 458899999999999
Q ss_pred hhhhhcc-CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccccCCCc
Q 003384 545 EDRLSCK-DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNT 623 (824)
Q Consensus 545 ~~~L~~~-~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~~~~~ 623 (824)
.+++... .....+++..+..++.|++.||.|||+ ++|+||||||+|||++.++.+||+|||++..+......
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~---- 153 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQ---RRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSK---- 153 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCcc----
Confidence 9887432 234568999999999999999999999 89999999999999999999999999998765432211
Q ss_pred cccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHH--HHHhhhccccccCCCCCCCChhh
Q 003384 624 TLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQ--YALDTGKLKNLLDPLAGDWPFVQ 701 (824)
Q Consensus 624 ~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~--~~~~~~~~~~~ld~~~~~~p~~~ 701 (824)
.....||+.|+|||++.+..++.++|||||||++|+|++|+.||....... ...... .+. ....++...
T Consensus 154 ----~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~----~~~-~~~~~~~~~ 224 (280)
T cd05608 154 ----TKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQR----ILN-DSVTYPDKF 224 (280)
T ss_pred ----ccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHh----hcc-cCCCCcccC
Confidence 123468999999999999999999999999999999999999996542211 111111 111 111234456
Q ss_pred HHHHHHHHHHHhhhccCCCCCh
Q 003384 702 AEQLANLAMRCCEMSRKSRPEL 723 (824)
Q Consensus 702 ~~~l~~Li~~Cl~~~P~~RPt~ 723 (824)
+..+.+++.+||+.+|.+||++
T Consensus 225 ~~~~~~li~~~l~~~P~~R~~~ 246 (280)
T cd05608 225 SPASKSFCEALLAKDPEKRLGF 246 (280)
T ss_pred CHHHHHHHHHHhcCCHHHhcCC
Confidence 7789999999999999999965
No 89
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=2.5e-36 Score=338.92 Aligned_cols=250 Identities=23% Similarity=0.276 Sum_probs=189.3
Q ss_pred CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC---CCchhHHHHHHHHHhcCCCceeeEecccC--CceEEEEE
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYE 537 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~---~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~E 537 (824)
+|...+.||.|+||.||++... +..||||++..... .....+.+|+++++.++||||++++++|. ...++|||
T Consensus 2 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~E 81 (377)
T cd05629 2 DFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIME 81 (377)
T ss_pred CceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEEe
Confidence 6888899999999999999875 57899999864321 22346788999999999999999999984 46899999
Q ss_pred ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccccc
Q 003384 538 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNE 617 (824)
Q Consensus 538 y~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~ 617 (824)
|++||+|.+++.. ...++...+..++.|++.||.|||+ +||+||||||+|||++.++.+||+|||+++.+....
T Consensus 82 ~~~gg~L~~~l~~---~~~~~~~~~~~~~~ql~~aL~~LH~---~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~ 155 (377)
T cd05629 82 FLPGGDLMTMLIK---YDTFSEDVTRFYMAECVLAIEAVHK---LGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQH 155 (377)
T ss_pred CCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEECCCCCEEEeeccccccccccc
Confidence 9999999999853 3568889999999999999999999 899999999999999999999999999997432211
Q ss_pred ccC-----------CCc----------------------------cccccCCCCCCcccCChhhhccCCCCcchhHHhHH
Q 003384 618 ISS-----------NNT----------------------------TLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFG 658 (824)
Q Consensus 618 ~~~-----------~~~----------------------------~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlG 658 (824)
... ... .........||+.|+|||++.+..++.++||||||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG 235 (377)
T cd05629 156 DSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLG 235 (377)
T ss_pred ccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecc
Confidence 000 000 00000124699999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCCCCChhhHHHHHHHHHHHhhhccCCC---CChH
Q 003384 659 IILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSR---PELG 724 (824)
Q Consensus 659 vvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~R---Pt~~ 724 (824)
|+||||+||++||................. ..........+..+.+|+.+|+. +|.+| |++.
T Consensus 236 vil~elltG~~Pf~~~~~~~~~~~i~~~~~---~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~ 300 (377)
T cd05629 236 AIMFECLIGWPPFCSENSHETYRKIINWRE---TLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAH 300 (377)
T ss_pred hhhhhhhcCCCCCCCCCHHHHHHHHHccCC---ccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHH
Confidence 999999999999976543222111111111 11101112345689999999997 66665 4763
No 90
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=7.9e-36 Score=315.67 Aligned_cols=247 Identities=25% Similarity=0.466 Sum_probs=196.3
Q ss_pred CCCccceeeecCceEEEEEEECC-eEEEEEEecCCCCCCchhHHHHHHHHHhcCCCceeeEecccC--CceEEEEEecCC
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLRH-MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYLPN 541 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~~-~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~Ey~~g 541 (824)
+|+..+.||+|+||.||+|.+.+ ..+|+|++.... .....+.+|+.+++.++||||+++++++. ...++||||++|
T Consensus 5 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 83 (256)
T cd05059 5 ELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGA-MSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMAN 83 (256)
T ss_pred HcchhhhhccCCCceEEEeEecCCccEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCC
Confidence 47778889999999999998764 579999986433 23457889999999999999999999884 467899999999
Q ss_pred CChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccccCC
Q 003384 542 GSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSN 621 (824)
Q Consensus 542 gsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~~~ 621 (824)
++|.+++... ...+++..+..++.+++.||.|||+ ++|+||||||+|||++.++.+||+|||+++.........
T Consensus 84 ~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~- 157 (256)
T cd05059 84 GCLLNYLRER--KGKLGTEWLLDMCSDVCEAMEYLES---NGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTS- 157 (256)
T ss_pred CCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHH---CCcccccccHhhEEECCCCcEEECCcccceecccccccc-
Confidence 9999998533 2368999999999999999999999 899999999999999999999999999988654322111
Q ss_pred CccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHh-CCCCCCCchHHHHHHhhhccccccCCCCCCCChh
Q 003384 622 NTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWPFV 700 (824)
Q Consensus 622 ~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELlt-G~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~ 700 (824)
.....++..|+|||++.+..++.++|||||||++|+|+| |++||............ ... .....+..
T Consensus 158 ------~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~---~~~---~~~~~~~~ 225 (256)
T cd05059 158 ------SQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESV---SAG---YRLYRPKL 225 (256)
T ss_pred ------cCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH---HcC---CcCCCCCC
Confidence 112234568999999998999999999999999999999 89999755433221111 111 11123445
Q ss_pred hHHHHHHHHHHHhhhccCCCCChHHHHHHHH
Q 003384 701 QAEQLANLAMRCCEMSRKSRPELGKDVWRVL 731 (824)
Q Consensus 701 ~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~L 731 (824)
.+..+.+++.+||..+|.+||++ .++++.|
T Consensus 226 ~~~~~~~li~~cl~~~p~~Rpt~-~~~l~~l 255 (256)
T cd05059 226 APTEVYTIMYSCWHEKPEDRPAF-KKLLSQL 255 (256)
T ss_pred CCHHHHHHHHHHhcCChhhCcCH-HHHHHHh
Confidence 67789999999999999999999 5555443
No 91
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=3.5e-36 Score=333.06 Aligned_cols=254 Identities=26% Similarity=0.421 Sum_probs=199.6
Q ss_pred CCCCccceeeecCceEEEEEEEC-------CeEEEEEEecCCCCC-CchhHHHHHHHHHhc-CCCceeeEecccC---Cc
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLLR-------HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKI-RHPNLVTLVGACP---EV 531 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~~-------~~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l-~HpnIv~L~g~~~---~~ 531 (824)
.+|.+.+.||.|+||.||+|... ++.||+|++...... ....+..|+.++.++ +||||++++++|. ..
T Consensus 7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~ 86 (337)
T cd05054 7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGP 86 (337)
T ss_pred HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCC
Confidence 46888999999999999999643 257999998754322 124577899999999 8999999999873 35
Q ss_pred eEEEEEecCCCChhhhhhccCC----------------------------------------------------------
Q 003384 532 WTLVYEYLPNGSLEDRLSCKDN---------------------------------------------------------- 553 (824)
Q Consensus 532 ~~LV~Ey~~ggsL~~~L~~~~~---------------------------------------------------------- 553 (824)
.++||||+++|+|.+++.....
T Consensus 87 ~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (337)
T cd05054 87 LMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELY 166 (337)
T ss_pred EEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHh
Confidence 7899999999999998853211
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccccCCCccccccCCCCC
Q 003384 554 SPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKG 633 (824)
Q Consensus 554 ~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~G 633 (824)
..++++..+..++.+|+.||.|||+ +||+||||||.|||++.++.+||+|||++..+....... ......+
T Consensus 167 ~~~l~~~~~~~~~~qi~~aL~~lH~---~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~------~~~~~~~ 237 (337)
T cd05054 167 KEPLTLEDLISYSFQVARGMEFLAS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYV------RKGDARL 237 (337)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchh------hccCCCC
Confidence 1368999999999999999999999 899999999999999999999999999998764332111 1123456
Q ss_pred CcccCChhhhccCCCCcchhHHhHHHHHHHHHh-CCCCCCCchH---HHHHHhhhccccccCCCCCCCChhhHHHHHHHH
Q 003384 634 TFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKE---VQYALDTGKLKNLLDPLAGDWPFVQAEQLANLA 709 (824)
Q Consensus 634 T~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELlt-G~~Pf~~~~~---~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li 709 (824)
+..|+|||++.+..++.++|||||||+||||++ |.+||..... ....+..+. ....+...+..+.+++
T Consensus 238 ~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~l~ 309 (337)
T cd05054 238 PLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGT--------RMRAPEYATPEIYSIM 309 (337)
T ss_pred CccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccC--------CCCCCccCCHHHHHHH
Confidence 788999999999999999999999999999998 9999965321 111111111 1112334456899999
Q ss_pred HHHhhhccCCCCChHHHHHHHHHHHH
Q 003384 710 MRCCEMSRKSRPELGKDVWRVLEPMR 735 (824)
Q Consensus 710 ~~Cl~~~P~~RPt~~~~v~~~Le~l~ 735 (824)
.+||+.+|.+||++ +++++.|+.+.
T Consensus 310 ~~cl~~~p~~RPs~-~ell~~l~~~~ 334 (337)
T cd05054 310 LDCWHNNPEDRPTF-SELVEILGDLL 334 (337)
T ss_pred HHHccCChhhCcCH-HHHHHHHHHHH
Confidence 99999999999999 77888887654
No 92
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=8.4e-36 Score=321.61 Aligned_cols=255 Identities=27% Similarity=0.397 Sum_probs=199.6
Q ss_pred CCCccceeeecCceEEEEEEECC-------eEEEEEEecCCCC-CCchhHHHHHHHHHhcCCCceeeEecccC--CceEE
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLRH-------MQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTL 534 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~~-------~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~L 534 (824)
+|.....||+|+||.||+|.... ..+++|.+..... .....+.+|+.+++.++||||+++++.|. +..++
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 80 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL 80 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence 46777889999999999998642 4689998865432 12346889999999999999999999884 46889
Q ss_pred EEEecCCCChhhhhhccC---------------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCc
Q 003384 535 VYEYLPNGSLEDRLSCKD---------------------NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPAN 593 (824)
Q Consensus 535 V~Ey~~ggsL~~~L~~~~---------------------~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~N 593 (824)
||||+.+|+|.+++.... ...++++..++.++.+++.||.|||+ ++|+||||||+|
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~---~~ivH~dikp~n 157 (290)
T cd05045 81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAE---MKLVHRDLAARN 157 (290)
T ss_pred EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHH---CCeehhhhhhhe
Confidence 999999999999875321 12358899999999999999999998 899999999999
Q ss_pred EEecCCCcceeeccccccccccccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHh-CCCCCC
Q 003384 594 ILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALG 672 (824)
Q Consensus 594 ILld~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELlt-G~~Pf~ 672 (824)
||++.++.+||+|||+++.......... .....++..|+|||++.+..++.++|||||||++|+|+| |.+||.
T Consensus 158 ill~~~~~~kl~dfg~~~~~~~~~~~~~------~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~ 231 (290)
T cd05045 158 VLVAEGRKMKISDFGLSRDVYEEDSYVK------RSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYP 231 (290)
T ss_pred EEEcCCCcEEeccccccccccCccchhc------ccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCC
Confidence 9999999999999999986543321111 122346778999999988889999999999999999998 999997
Q ss_pred CchHHHHHHhhhccccccCCCCCCCChhhHHHHHHHHHHHhhhccCCCCChHHHHHHHHHHHH
Q 003384 673 ITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMR 735 (824)
Q Consensus 673 ~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le~l~ 735 (824)
............ .......+...+..+.+++.+||+.+|.+||++ .++...|+.+.
T Consensus 232 ~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~-~~i~~~l~~~~ 287 (290)
T cd05045 232 GIAPERLFNLLK------TGYRMERPENCSEEMYNLMLTCWKQEPDKRPTF-ADISKELEKMM 287 (290)
T ss_pred CCCHHHHHHHHh------CCCCCCCCCCCCHHHHHHHHHHccCCcccCCCH-HHHHHHHHHHH
Confidence 554322111110 011112234456789999999999999999999 77888887764
No 93
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=1.1e-35 Score=315.07 Aligned_cols=249 Identities=29% Similarity=0.486 Sum_probs=199.7
Q ss_pred CCCccceeeecCceEEEEEEECC-eEEEEEEecCCCCCCchhHHHHHHHHHhcCCCceeeEecccC-CceEEEEEecCCC
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLRH-MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP-EVWTLVYEYLPNG 542 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~~-~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~-~~~~LV~Ey~~gg 542 (824)
+|++.++||+|+||.||+|...+ ..||+|.+..... ....+.+|+.++++++||||+++++++. ...++||||++++
T Consensus 7 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~lv~e~~~~~ 85 (260)
T cd05070 7 SLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVSEEPIYIVTEYMSKG 85 (260)
T ss_pred HhhhhheeccccCceEEEEEecCCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEECCCCcEEEEEecCCC
Confidence 57888899999999999998764 6799999876433 4567999999999999999999999874 4578999999999
Q ss_pred ChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccccCCC
Q 003384 543 SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNN 622 (824)
Q Consensus 543 sL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~~~~ 622 (824)
+|.+++... ....+++..+..++.+++.||.|||+ ++|+||||||+||+++.++.+||+|||++..+.......
T Consensus 86 ~L~~~~~~~-~~~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~-- 159 (260)
T cd05070 86 SLLDFLKDG-EGRALKLPNLVDMAAQVAAGMAYIER---MNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTA-- 159 (260)
T ss_pred cHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCccceEEEeCCceEEeCCceeeeeccCccccc--
Confidence 999998543 23458999999999999999999999 889999999999999999999999999998664332111
Q ss_pred ccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHh-CCCCCCCchHHHHHHhhhccccccCCCCCCCChhh
Q 003384 623 TTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQ 701 (824)
Q Consensus 623 ~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELlt-G~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~ 701 (824)
.....++..|+|||++.+..++.++||||||+++|+|++ |.+||............ ........+...
T Consensus 160 -----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~------~~~~~~~~~~~~ 228 (260)
T cd05070 160 -----RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQV------ERGYRMPCPQDC 228 (260)
T ss_pred -----ccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH------HcCCCCCCCCcC
Confidence 112345678999999988889999999999999999999 99999654432211111 011112234455
Q ss_pred HHHHHHHHHHHhhhccCCCCChHHHHHHHHH
Q 003384 702 AEQLANLAMRCCEMSRKSRPELGKDVWRVLE 732 (824)
Q Consensus 702 ~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le 732 (824)
+..+.+|+.+|+..+|.+||++ ..+.+.|+
T Consensus 229 ~~~~~~li~~~l~~~p~~Rpt~-~~l~~~l~ 258 (260)
T cd05070 229 PISLHELMLQCWKKDPEERPTF-EYLQSFLE 258 (260)
T ss_pred CHHHHHHHHHHcccCcccCcCH-HHHHHHHh
Confidence 6789999999999999999999 56666665
No 94
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=2.7e-36 Score=330.75 Aligned_cols=237 Identities=23% Similarity=0.282 Sum_probs=188.4
Q ss_pred ceeeecCceEEEEEEEC--CeEEEEEEecCCC---CCCchhHHHHHHHHHhc-CCCceeeEecccC--CceEEEEEecCC
Q 003384 470 LKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS---LQGPSEFQQEIDILSKI-RHPNLVTLVGACP--EVWTLVYEYLPN 541 (824)
Q Consensus 470 ~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~---~~~~~~f~~Ei~iL~~l-~HpnIv~L~g~~~--~~~~LV~Ey~~g 541 (824)
+.||+|+||.||+|... +..||+|++.... ......+..|..++..+ +||||+++++++. +..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 36999999999999885 5789999987532 12334567788888765 8999999999884 468899999999
Q ss_pred CChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccccCC
Q 003384 542 GSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSN 621 (824)
Q Consensus 542 gsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~~~ 621 (824)
|+|.+++.. ...+++..+..++.|++.||.|||+ +||+||||||+|||++.++.+||+|||+++.......
T Consensus 81 g~L~~~i~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--- 151 (316)
T cd05620 81 GDLMFHIQD---KGRFDLYRATFYAAEIVCGLQFLHS---KGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDN--- 151 (316)
T ss_pred CcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEECCCCCEEeCccCCCeecccCCC---
Confidence 999998843 3468899999999999999999999 8999999999999999999999999999874321110
Q ss_pred CccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCCCCChhh
Q 003384 622 NTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQ 701 (824)
Q Consensus 622 ~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~ 701 (824)
......||+.|+|||++.+..++.++|||||||++|+|++|+.||......... .... ......|...
T Consensus 152 -----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~-~~~~------~~~~~~~~~~ 219 (316)
T cd05620 152 -----RASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELF-ESIR------VDTPHYPRWI 219 (316)
T ss_pred -----ceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHH-HHHH------hCCCCCCCCC
Confidence 013346899999999999999999999999999999999999999765432211 1100 0112233445
Q ss_pred HHHHHHHHHHHhhhccCCCCChHHHH
Q 003384 702 AEQLANLAMRCCEMSRKSRPELGKDV 727 (824)
Q Consensus 702 ~~~l~~Li~~Cl~~~P~~RPt~~~~v 727 (824)
+..+.+++.+||+.+|.+||++.+++
T Consensus 220 ~~~~~~li~~~l~~dP~~R~~~~~~~ 245 (316)
T cd05620 220 TKESKDILEKLFERDPTRRLGVVGNI 245 (316)
T ss_pred CHHHHHHHHHHccCCHHHcCCChHHH
Confidence 67899999999999999999985444
No 95
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=2.4e-36 Score=331.76 Aligned_cols=232 Identities=25% Similarity=0.301 Sum_probs=187.2
Q ss_pred eeeecCceEEEEEEEC--CeEEEEEEecCCC---CCCchhHHHHHHHHHhc-CCCceeeEecccC--CceEEEEEecCCC
Q 003384 471 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHS---LQGPSEFQQEIDILSKI-RHPNLVTLVGACP--EVWTLVYEYLPNG 542 (824)
Q Consensus 471 ~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~---~~~~~~f~~Ei~iL~~l-~HpnIv~L~g~~~--~~~~LV~Ey~~gg 542 (824)
.||+|+||.||+|... +..||||++.... ......+..|..++..+ +||||+++++++. +..++||||+++|
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~g 81 (320)
T cd05590 2 VLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNGG 81 (320)
T ss_pred eeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCCc
Confidence 6999999999999876 5789999987532 22334577899998876 6999999999884 4689999999999
Q ss_pred ChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccccCCC
Q 003384 543 SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNN 622 (824)
Q Consensus 543 sL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~~~~ 622 (824)
+|.+++.. ...+++..+..++.|++.||.|||+ ++|+||||||+|||++.++.+||+|||+++........
T Consensus 82 ~L~~~i~~---~~~l~~~~~~~~~~ql~~~L~~lH~---~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~--- 152 (320)
T cd05590 82 DLMFHIQK---SRRFDEARARFYAAEITSALMFLHD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKT--- 152 (320)
T ss_pred hHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCc---
Confidence 99998843 3468899999999999999999999 89999999999999999999999999998753221110
Q ss_pred ccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCCCCChhhH
Q 003384 623 TTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQA 702 (824)
Q Consensus 623 ~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~ 702 (824)
.....||+.|+|||++.+..++.++|||||||++|+|++|++||............ .. .....|...+
T Consensus 153 -----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i--~~-----~~~~~~~~~~ 220 (320)
T cd05590 153 -----TSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAI--LN-----DEVVYPTWLS 220 (320)
T ss_pred -----ccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHH--hc-----CCCCCCCCCC
Confidence 12346999999999999889999999999999999999999999765433211110 00 1112334456
Q ss_pred HHHHHHHHHHhhhccCCCCCh
Q 003384 703 EQLANLAMRCCEMSRKSRPEL 723 (824)
Q Consensus 703 ~~l~~Li~~Cl~~~P~~RPt~ 723 (824)
..+.+++.+||+.+|.+||+.
T Consensus 221 ~~~~~li~~~L~~dP~~R~~~ 241 (320)
T cd05590 221 QDAVDILKAFMTKNPTMRLGS 241 (320)
T ss_pred HHHHHHHHHHcccCHHHCCCC
Confidence 789999999999999999997
No 96
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=3.9e-36 Score=322.51 Aligned_cols=252 Identities=24% Similarity=0.392 Sum_probs=196.9
Q ss_pred CCCccceeeecCceEEEEEEEC-------CeEEEEEEecCCCCCC-chhHHHHHHHHHhcCCCceeeEecccC--CceEE
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR-------HMQVAIKMLHPHSLQG-PSEFQQEIDILSKIRHPNLVTLVGACP--EVWTL 534 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~-------~~~VAvK~l~~~~~~~-~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~L 534 (824)
+|...+.||+|+||.||+|.+. +..||||++....... ...|.+|+.+++.++||||+++++++. +..++
T Consensus 6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~ 85 (283)
T cd05091 6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSM 85 (283)
T ss_pred HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEE
Confidence 3666778999999999999864 2679999987543221 346889999999999999999999884 46789
Q ss_pred EEEecCCCChhhhhhccC-------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCc
Q 003384 535 VYEYLPNGSLEDRLSCKD-------------NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFV 601 (824)
Q Consensus 535 V~Ey~~ggsL~~~L~~~~-------------~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~ 601 (824)
++||+++++|.+++.... ....+++..+..++.|++.||.|||+ ++|+||||||+|||++.++.
T Consensus 86 ~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~---~gi~H~dlkp~Nil~~~~~~ 162 (283)
T cd05091 86 IFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSS---HHVVHKDLATRNVLVFDKLN 162 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHH---cCccccccchhheEecCCCc
Confidence 999999999999984221 12358888999999999999999999 89999999999999999999
Q ss_pred ceeeccccccccccccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHh-CCCCCCCchHHHHH
Q 003384 602 SKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYA 680 (824)
Q Consensus 602 vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELlt-G~~Pf~~~~~~~~~ 680 (824)
+||+|||+++......... ......+++.|+|||.+.++.++.++|||||||++|||+| |.+||.........
T Consensus 163 ~kl~Dfg~~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~ 236 (283)
T cd05091 163 VKISDLGLFREVYAADYYK------LMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVI 236 (283)
T ss_pred eEecccccccccccchhee------eccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHH
Confidence 9999999988654332111 0123456889999999988889999999999999999998 88898654332111
Q ss_pred HhhhccccccCCCCCCCChhhHHHHHHHHHHHhhhccCCCCChHHHHHHHHH
Q 003384 681 LDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLE 732 (824)
Q Consensus 681 ~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le 732 (824)
..+........+...+..+.+|+.+||+.+|.+||++ .+++..|+
T Consensus 237 ------~~i~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~-~~i~~~l~ 281 (283)
T cd05091 237 ------EMIRNRQVLPCPDDCPAWVYTLMLECWNEFPSRRPRF-KDIHSRLR 281 (283)
T ss_pred ------HHHHcCCcCCCCCCCCHHHHHHHHHHhCCCcccCCCH-HHHHHHhh
Confidence 1111111222344566789999999999999999999 66666654
No 97
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=2.2e-36 Score=333.28 Aligned_cols=240 Identities=22% Similarity=0.271 Sum_probs=186.4
Q ss_pred ceeeecCceEEEEEEEC--CeEEEEEEecCCCC---CCchhHHHHHHHHHhc-CCCceeeEecccC--CceEEEEEecCC
Q 003384 470 LKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEIDILSKI-RHPNLVTLVGACP--EVWTLVYEYLPN 541 (824)
Q Consensus 470 ~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~---~~~~~f~~Ei~iL~~l-~HpnIv~L~g~~~--~~~~LV~Ey~~g 541 (824)
+.||+|+||.||+|... +..||||++..... .....+..|..++..+ +||||++++++|. ...++||||++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 36999999999999875 57899999975422 2234578999999998 7999999999884 468999999999
Q ss_pred CChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccccCC
Q 003384 542 GSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSN 621 (824)
Q Consensus 542 gsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~~~ 621 (824)
|+|.+++.. ...+++..+..++.|++.||.|||+ +||+||||||+|||++.++.+||+|||+++........
T Consensus 81 g~L~~~~~~---~~~l~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~-- 152 (329)
T cd05588 81 GDLMFHMQR---QRKLPEEHARFYSAEISLALNFLHE---RGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDT-- 152 (329)
T ss_pred CCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEECCCCCEEECcCccccccccCCCc--
Confidence 999988842 3569999999999999999999999 89999999999999999999999999998743211110
Q ss_pred CccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHH--HHHhhhccccccCCCCCCCCh
Q 003384 622 NTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQ--YALDTGKLKNLLDPLAGDWPF 699 (824)
Q Consensus 622 ~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~--~~~~~~~~~~~ld~~~~~~p~ 699 (824)
.....||+.|+|||++.+..++.++|||||||++|+|+||+.||....... ...........+.......|.
T Consensus 153 ------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 226 (329)
T cd05588 153 ------TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIRIPR 226 (329)
T ss_pred ------cccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCCCCCC
Confidence 123468999999999999999999999999999999999999996321100 000000000000011112344
Q ss_pred hhHHHHHHHHHHHhhhccCCCCCh
Q 003384 700 VQAEQLANLAMRCCEMSRKSRPEL 723 (824)
Q Consensus 700 ~~~~~l~~Li~~Cl~~~P~~RPt~ 723 (824)
..+..+.+++.+||+.+|.+||+.
T Consensus 227 ~~~~~~~~li~~~L~~dP~~R~~~ 250 (329)
T cd05588 227 SLSVKASSVLKGFLNKDPKERLGC 250 (329)
T ss_pred CCCHHHHHHHHHHhccCHHHcCCC
Confidence 556789999999999999999984
No 98
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=9.3e-36 Score=316.72 Aligned_cols=251 Identities=31% Similarity=0.479 Sum_probs=200.3
Q ss_pred CCCCccceeeecCceEEEEEEECC-eEEEEEEecCCCCCCchhHHHHHHHHHhcCCCceeeEecccC-CceEEEEEecCC
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLLRH-MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP-EVWTLVYEYLPN 541 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~~~-~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~-~~~~LV~Ey~~g 541 (824)
.+|.+.++||+|+||.||+|.+.+ ..||+|++.... .....|.+|+.+++.++||||+++++.+. +..++||||+++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~lv~e~~~~ 84 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSK 84 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCc-cCHHHHHHHHHHHHhCCCCCcceEEEEECCCCcEEEEEcCCC
Confidence 468889999999999999998764 579999987533 23467899999999999999999999774 467899999999
Q ss_pred CChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccccCC
Q 003384 542 GSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSN 621 (824)
Q Consensus 542 gsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~~~ 621 (824)
|+|.+++... ....+++..+..++.+++.||.|||+ ++++||||||.|||++.++.+||+|||++..+.......
T Consensus 85 ~~L~~~~~~~-~~~~~~~~~~~~~~~~l~~aL~~lH~---~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~- 159 (262)
T cd05071 85 GSLLDFLKGE-MGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA- 159 (262)
T ss_pred CcHHHHHhhc-cccCCCHHHHHHHHHHHHHHHHHHHH---CCccccccCcccEEEcCCCcEEeccCCceeecccccccc-
Confidence 9999999532 23457899999999999999999999 899999999999999999999999999998664332111
Q ss_pred CccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHh-CCCCCCCchHHHHHHhhhccccccCCCCCCCChh
Q 003384 622 NTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWPFV 700 (824)
Q Consensus 622 ~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELlt-G~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~ 700 (824)
.....++..|+|||++.+..++.++|||||||++|+|+| |.+||............ ........+..
T Consensus 160 ------~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~------~~~~~~~~~~~ 227 (262)
T cd05071 160 ------RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV------ERGYRMPCPPE 227 (262)
T ss_pred ------ccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHH------hcCCCCCCccc
Confidence 122346788999999988899999999999999999999 88999754322111110 00001112334
Q ss_pred hHHHHHHHHHHHhhhccCCCCChHHHHHHHHHH
Q 003384 701 QAEQLANLAMRCCEMSRKSRPELGKDVWRVLEP 733 (824)
Q Consensus 701 ~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le~ 733 (824)
.+..+.+++.+|++.+|.+||++ ..+.+.|+.
T Consensus 228 ~~~~l~~li~~~l~~~p~~Rp~~-~~~~~~l~~ 259 (262)
T cd05071 228 CPESLHDLMCQCWRKEPEERPTF-EYLQAFLED 259 (262)
T ss_pred cCHHHHHHHHHHccCCcccCCCH-HHHHHHHHH
Confidence 56789999999999999999999 677777764
No 99
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=1.1e-35 Score=315.62 Aligned_cols=256 Identities=26% Similarity=0.404 Sum_probs=200.6
Q ss_pred CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCC---chhHHHHHHHHHhcCCCceeeEeccc--CCceEEEE
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG---PSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVY 536 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~---~~~f~~Ei~iL~~l~HpnIv~L~g~~--~~~~~LV~ 536 (824)
.+|...+.||+|+||.||+|... +..||||.+....... ...+.+|+.+++.++||||+++++++ .+..++||
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 46888899999999999999874 6889999876533222 23578999999999999999999987 35688999
Q ss_pred EecCCCChhhhhhcc-CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccc
Q 003384 537 EYLPNGSLEDRLSCK-DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQ 615 (824)
Q Consensus 537 Ey~~ggsL~~~L~~~-~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~ 615 (824)
||+++|+|.+++... .....++...+..++.+++.||.|||+ ++++|+||||+|||++.++.++|+|||++..+..
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~ 158 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCCHHHEEEcCCCCEEECccccceeccc
Confidence 999999999888532 223458889999999999999999999 8999999999999999999999999999886643
Q ss_pred ccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCC
Q 003384 616 NEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAG 695 (824)
Q Consensus 616 ~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~ 695 (824)
.... .....|++.|+|||.+.+..++.++||||||+++|+|++|+.||............ .+.....+ .
T Consensus 159 ~~~~--------~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~-~~~~~~~~--~ 227 (267)
T cd08228 159 KTTA--------AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQ-KIEQCDYP--P 227 (267)
T ss_pred hhHH--------HhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHH-HHhcCCCC--C
Confidence 3211 12345889999999999888999999999999999999999998543211110100 01111111 1
Q ss_pred CCChhhHHHHHHHHHHHhhhccCCCCChHHHHHHHHHHH
Q 003384 696 DWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM 734 (824)
Q Consensus 696 ~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le~l 734 (824)
..+...+..+.+++.+||..+|.+||++ .++.+.|+.+
T Consensus 228 ~~~~~~~~~~~~li~~cl~~~p~~Rp~~-~~vl~~~~~~ 265 (267)
T cd08228 228 LPTEHYSEKLRELVSMCIYPDPDQRPDI-GYVHQIAKQM 265 (267)
T ss_pred CChhhcCHHHHHHHHHHCCCCcccCcCH-HHHHHHHHHh
Confidence 1122345789999999999999999999 7787887765
No 100
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=6.9e-36 Score=317.59 Aligned_cols=246 Identities=27% Similarity=0.342 Sum_probs=193.5
Q ss_pred CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCCchhHHHHHHHHHhcCCCceeeEeccc--CCceEEEEEec
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYL 539 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~--~~~~~LV~Ey~ 539 (824)
.+|...+.||+|+||.||+|... +..||+|++..........+.+|+.++++++||||+++++++ .+..++||||+
T Consensus 9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~~ 88 (267)
T cd06646 9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYC 88 (267)
T ss_pred hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeCC
Confidence 46889999999999999999874 578999999765444456788999999999999999999987 45688999999
Q ss_pred CCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccccccc
Q 003384 540 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEIS 619 (824)
Q Consensus 540 ~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~ 619 (824)
++|+|.+++.. ..++++..+..++.|++.||.|||+ ++|+||||||.||+++.++.+||+|||++..+.....
T Consensus 89 ~~~~L~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~- 161 (267)
T cd06646 89 GGGSLQDIYHV---TGPLSELQIAYVCRETLQGLAYLHS---KGKMHRDIKGANILLTDNGDVKLADFGVAAKITATIA- 161 (267)
T ss_pred CCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEECCCCCEEECcCccceeeccccc-
Confidence 99999998842 3468999999999999999999999 8999999999999999999999999999986532211
Q ss_pred CCCccccccCCCCCCcccCChhhhc---cCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCCC
Q 003384 620 SNNTTLCCRTDPKGTFAYMDPEFLA---SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGD 696 (824)
Q Consensus 620 ~~~~~~~~~~~~~GT~~Y~APE~l~---~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~ 696 (824)
......|++.|+|||.+. ...++.++|||||||++|+|++|++||............. ...+.+....
T Consensus 162 -------~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~ 232 (267)
T cd06646 162 -------KRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMS--KSNFQPPKLK 232 (267)
T ss_pred -------ccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeee--cCCCCCCCCc
Confidence 012345889999999884 3457889999999999999999999985433221111100 0011111111
Q ss_pred CChhhHHHHHHHHHHHhhhccCCCCChHH
Q 003384 697 WPFVQAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 697 ~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
.+...+..+.+++.+||..+|.+||++.+
T Consensus 233 ~~~~~~~~~~~li~~~l~~~P~~Rp~~~~ 261 (267)
T cd06646 233 DKTKWSSTFHNFVKISLTKNPKKRPTAER 261 (267)
T ss_pred cccccCHHHHHHHHHHhhCChhhCcCHHH
Confidence 12234568999999999999999999943
No 101
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=1.2e-35 Score=314.28 Aligned_cols=245 Identities=27% Similarity=0.486 Sum_probs=195.6
Q ss_pred ceeeecCceEEEEEEECC-----eEEEEEEecCCCCC-CchhHHHHHHHHHhcCCCceeeEecccC-CceEEEEEecCCC
Q 003384 470 LKIGEGGYGSIYKGLLRH-----MQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACP-EVWTLVYEYLPNG 542 (824)
Q Consensus 470 ~~LG~G~fG~Vykg~~~~-----~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIv~L~g~~~-~~~~LV~Ey~~gg 542 (824)
++||+|+||.||+|.+.. ..||+|.+...... ....+.+|+.+++.++||||+++++++. +..++||||+++|
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~v~e~~~~~ 80 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCKGEPLMLVMELAPLG 80 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEcCCceEEEEEeCCCC
Confidence 369999999999997642 57999998765442 3456889999999999999999999884 4678999999999
Q ss_pred ChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccccCCC
Q 003384 543 SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNN 622 (824)
Q Consensus 543 sL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~~~~ 622 (824)
+|.+++... ..+++..+..++.+++.||.|||. .+++||||||+|||++.++.+||+|||+++..........
T Consensus 81 ~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lh~---~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~- 153 (257)
T cd05060 81 PLLKYLKKR---REIPVSDLKELAHQVAMGMAYLES---KHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYR- 153 (257)
T ss_pred cHHHHHHhC---CCCCHHHHHHHHHHHHHHHHHHhh---cCeeccCcccceEEEcCCCcEEeccccccceeecCCcccc-
Confidence 999999532 368999999999999999999999 7899999999999999999999999999986643321110
Q ss_pred ccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHh-CCCCCCCchHHHH--HHhhhccccccCCCCCCCCh
Q 003384 623 TTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQY--ALDTGKLKNLLDPLAGDWPF 699 (824)
Q Consensus 623 ~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELlt-G~~Pf~~~~~~~~--~~~~~~~~~~ld~~~~~~p~ 699 (824)
......++..|+|||.+.+..++.++|||||||++|+|++ |.+||........ .+..+. ....+.
T Consensus 154 ----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~~--------~~~~~~ 221 (257)
T cd05060 154 ----ATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGE--------RLPRPE 221 (257)
T ss_pred ----cccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCC--------cCCCCC
Confidence 0122335678999999998899999999999999999998 9999975443221 111111 112334
Q ss_pred hhHHHHHHHHHHHhhhccCCCCChHHHHHHHHHHH
Q 003384 700 VQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM 734 (824)
Q Consensus 700 ~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le~l 734 (824)
..+..+.+++.+||..+|.+||++ .++.+.|+.+
T Consensus 222 ~~~~~l~~li~~cl~~~p~~Rp~~-~~l~~~l~~~ 255 (257)
T cd05060 222 ECPQEIYSIMLSCWKYRPEDRPTF-SELESTFRRD 255 (257)
T ss_pred CCCHHHHHHHHHHhcCChhhCcCH-HHHHHHHHhc
Confidence 456789999999999999999999 6777777653
No 102
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=9.4e-36 Score=314.83 Aligned_cols=243 Identities=27% Similarity=0.462 Sum_probs=197.5
Q ss_pred CCCccceeeecCceEEEEEEECCeEEEEEEecCCCCCCchhHHHHHHHHHhcCCCceeeEeccc---CCceEEEEEecCC
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC---PEVWTLVYEYLPN 541 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~---~~~~~LV~Ey~~g 541 (824)
+|...+.||+|+||.||+|...+..||+|.+.... ....+.+|+.++++++|||+++++|++ ....++||||+++
T Consensus 7 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~k~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~ 84 (256)
T cd05082 7 ELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAK 84 (256)
T ss_pred hCeeeeeecccCCCeEEEEEEcCCcEEEEEeCCCc--hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECCCC
Confidence 57788899999999999999999999999986432 345789999999999999999999975 2357899999999
Q ss_pred CChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccccCC
Q 003384 542 GSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSN 621 (824)
Q Consensus 542 gsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~~~ 621 (824)
|+|.+++.... ...+++..+..++.+++.||.|||+ +|++||||||+|||++.++.+||+|||++.......
T Consensus 85 ~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~---- 156 (256)
T cd05082 85 GSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEA---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ---- 156 (256)
T ss_pred CcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHh---CCEeccccchheEEEcCCCcEEecCCccceeccccC----
Confidence 99999985432 3458899999999999999999999 899999999999999999999999999987543221
Q ss_pred CccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHh-CCCCCCCchHHH--HHHhhhccccccCCCCCCCC
Q 003384 622 NTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQ--YALDTGKLKNLLDPLAGDWP 698 (824)
Q Consensus 622 ~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELlt-G~~Pf~~~~~~~--~~~~~~~~~~~ld~~~~~~p 698 (824)
....++..|+|||++.+..++.++|||||||++|+|++ |++||....... ..+..+ .....+
T Consensus 157 -------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~--------~~~~~~ 221 (256)
T cd05082 157 -------DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKG--------YKMDAP 221 (256)
T ss_pred -------CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcC--------CCCCCC
Confidence 12235678999999998899999999999999999998 999996543221 111111 111223
Q ss_pred hhhHHHHHHHHHHHhhhccCCCCChHHHHHHHHHH
Q 003384 699 FVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEP 733 (824)
Q Consensus 699 ~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le~ 733 (824)
...+..+.+++.+||+.+|.+||++ .++.+.|+.
T Consensus 222 ~~~~~~~~~li~~~l~~~p~~Rpt~-~~l~~~l~~ 255 (256)
T cd05082 222 DGCPPVVYDVMKQCWHLDAATRPSF-LQLREQLEH 255 (256)
T ss_pred CCCCHHHHHHHHHHhcCChhhCcCH-HHHHHHHhc
Confidence 4456789999999999999999999 667666653
No 103
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=3.1e-36 Score=338.85 Aligned_cols=248 Identities=22% Similarity=0.303 Sum_probs=189.6
Q ss_pred CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC---CCchhHHHHHHHHHhcCCCceeeEecccC--CceEEEEE
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYE 537 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~---~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~E 537 (824)
.|...++||+|+||.||+|... +..||||++..... .....+.+|+.++++++||||++++++|. +..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 5788899999999999999875 57899999875322 12346889999999999999999999984 46899999
Q ss_pred ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccccc
Q 003384 538 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNE 617 (824)
Q Consensus 538 y~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~ 617 (824)
|+++|+|.+++.. ...++......++.||+.||.|||+ ++|+||||||+|||++.+|.+||+|||++..+....
T Consensus 82 ~~~gg~L~~~l~~---~~~~~e~~~~~~~~qi~~al~~lH~---~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~ 155 (382)
T cd05625 82 YIPGGDMMSLLIR---MGIFPEDLARFYIAELTCAVESVHK---MGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH 155 (382)
T ss_pred CCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEEeECCCCccccccc
Confidence 9999999999853 2458888999999999999999999 899999999999999999999999999986432110
Q ss_pred ccCC---------------------------------------CccccccCCCCCCcccCChhhhccCCCCcchhHHhHH
Q 003384 618 ISSN---------------------------------------NTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFG 658 (824)
Q Consensus 618 ~~~~---------------------------------------~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlG 658 (824)
.... ...........||+.|+|||++.+..++.++||||||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG 235 (382)
T cd05625 156 DSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVG 235 (382)
T ss_pred cccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEech
Confidence 0000 0000001234699999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCCCCChhhHHHHHHHHHHHhhhccCCCCC
Q 003384 659 IILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPE 722 (824)
Q Consensus 659 vvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt 722 (824)
|+||||+||++||................. ..........+..+.+++.+++ .+|.+|++
T Consensus 236 vil~elltG~~Pf~~~~~~~~~~~i~~~~~---~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~ 295 (382)
T cd05625 236 VILYEMLVGQPPFLAQTPLETQMKVINWQT---SLHIPPQAKLSPEASDLIIKLC-RGPEDRLG 295 (382)
T ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHccCC---CcCCCCcccCCHHHHHHHHHHc-cCHhHcCC
Confidence 999999999999986654332222111111 1111111234567888888876 49999997
No 104
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=2e-35 Score=313.06 Aligned_cols=256 Identities=28% Similarity=0.425 Sum_probs=202.5
Q ss_pred CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC---CCchhHHHHHHHHHhcCCCceeeEecccC--CceEEEE
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVY 536 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~---~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~ 536 (824)
++|...+.||+|+||.||+|... +..||+|.++.... .....+.+|+.++++++|+||+++++++. +..++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 47888899999999999999886 68899998864322 22457889999999999999999999884 4688999
Q ss_pred EecCCCChhhhhhcc-CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccc
Q 003384 537 EYLPNGSLEDRLSCK-DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQ 615 (824)
Q Consensus 537 Ey~~ggsL~~~L~~~-~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~ 615 (824)
||+++|+|.+++... .....+++..+..++.+++.||.|||+ .||+||||+|+||+++.++.++|+|||++..+..
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~ 158 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHS---KRIMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHh---CCEecCCcChhhEEECCCCcEEEeccceeeeccC
Confidence 999999999988543 234568999999999999999999999 8999999999999999999999999999876543
Q ss_pred ccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCC
Q 003384 616 NEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAG 695 (824)
Q Consensus 616 ~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~ 695 (824)
.... .....|++.|+|||.+.+..++.++|||||||++|+|++|+.||.................. ..
T Consensus 159 ~~~~--------~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~----~~ 226 (267)
T cd08224 159 KTTA--------AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCD----YP 226 (267)
T ss_pred CCcc--------cceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhcCC----CC
Confidence 2211 12235889999999999888999999999999999999999999543211110100000011 11
Q ss_pred CCCh-hhHHHHHHHHHHHhhhccCCCCChHHHHHHHHHHHH
Q 003384 696 DWPF-VQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMR 735 (824)
Q Consensus 696 ~~p~-~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le~l~ 735 (824)
..|. ..+..+.+++.+||..+|.+||++ ..+.+.|..+.
T Consensus 227 ~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~-~~il~~~~~~~ 266 (267)
T cd08224 227 PLPADHYSEELRDLVSRCINPDPEKRPDI-SYVLQVAKEMH 266 (267)
T ss_pred CCChhhcCHHHHHHHHHHcCCCcccCCCH-HHHHHHHHHhc
Confidence 1122 445689999999999999999999 67778877653
No 105
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=6.1e-36 Score=322.49 Aligned_cols=243 Identities=23% Similarity=0.310 Sum_probs=193.4
Q ss_pred CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCC---CchhHHHHHHHHHhcCCCceeeEecccC--CceEEEEE
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ---GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYE 537 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~---~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~E 537 (824)
+|+..++||+|+||.||++... +..||||++...... ....+.+|+.+++.++||||+++++.+. +..++|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 4777889999999999999875 578999998653322 2235778999999999999999999884 46899999
Q ss_pred ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccccc
Q 003384 538 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNE 617 (824)
Q Consensus 538 y~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~ 617 (824)
|+++|+|.+++... ....+++..+..++.|++.||.|||+ ++|+||||||+|||+++++.++|+|||++.......
T Consensus 81 ~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 156 (285)
T cd05605 81 LMNGGDLKFHIYNM-GNPGFDEERAVFYAAEITCGLEDLHR---ERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGE 156 (285)
T ss_pred ccCCCcHHHHHHhc-CcCCCCHHHHHHHHHHHHHHHHHHHH---CCcEecCCCHHHEEECCCCCEEEeeCCCceecCCCC
Confidence 99999999888533 23468999999999999999999999 899999999999999999999999999987653221
Q ss_pred ccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCCCC
Q 003384 618 ISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDW 697 (824)
Q Consensus 618 ~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~ 697 (824)
. .....||+.|+|||++.+..++.++|||||||++|+|++|+.||.......... .+...+.......
T Consensus 157 ~---------~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~---~~~~~~~~~~~~~ 224 (285)
T cd05605 157 T---------IRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKRE---EVERRVKEDQEEY 224 (285)
T ss_pred c---------cccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHH---HHHHHhhhccccc
Confidence 1 023458999999999998899999999999999999999999997543211100 0011111112223
Q ss_pred ChhhHHHHHHHHHHHhhhccCCCCCh
Q 003384 698 PFVQAEQLANLAMRCCEMSRKSRPEL 723 (824)
Q Consensus 698 p~~~~~~l~~Li~~Cl~~~P~~RPt~ 723 (824)
+...+..+.+|+.+||+.+|.+||+.
T Consensus 225 ~~~~~~~~~~li~~~l~~~P~~R~~~ 250 (285)
T cd05605 225 SEKFSEAARSICRQLLTKDPGFRLGC 250 (285)
T ss_pred CcccCHHHHHHHHHHccCCHHHhcCC
Confidence 44466789999999999999999953
No 106
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=2.3e-36 Score=333.03 Aligned_cols=241 Identities=25% Similarity=0.330 Sum_probs=189.0
Q ss_pred CCCccceeeecCceEEEEEEE-----CCeEEEEEEecCCC----CCCchhHHHHHHHHHhc-CCCceeeEecccC--Cce
Q 003384 465 NFDPSLKIGEGGYGSIYKGLL-----RHMQVAIKMLHPHS----LQGPSEFQQEIDILSKI-RHPNLVTLVGACP--EVW 532 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~-----~~~~VAvK~l~~~~----~~~~~~f~~Ei~iL~~l-~HpnIv~L~g~~~--~~~ 532 (824)
+|...+.||+|+||.||++.. .+..||+|++.... ......+..|+.++..+ +||||+++++++. ...
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 477889999999999999875 35789999986432 12234678899999999 5999999998874 457
Q ss_pred EEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccc
Q 003384 533 TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRF 612 (824)
Q Consensus 533 ~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~ 612 (824)
++||||+++|+|.+++.. ...+++..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+++.
T Consensus 81 ~lv~e~~~~g~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~ 154 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQ---RDNFSEDEVRFYSGEIILALEHLHK---LGIVYRDIKLENILLDSEGHVVLTDFGLSKE 154 (332)
T ss_pred EEEEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcEecCCCHHHeEECCCCCEEEeeCcCCcc
Confidence 899999999999999853 3468899999999999999999999 8999999999999999999999999999986
Q ss_pred cccccccCCCccccccCCCCCCcccCChhhhccC-CCCcchhHHhHHHHHHHHHhCCCCCCCchH--HHHHHhhhccccc
Q 003384 613 LSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLTGRPALGITKE--VQYALDTGKLKNL 689 (824)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~--~~~~~~~~~~~~~ 689 (824)
+....... .....||+.|+|||++.+. .++.++|||||||+||||+||+.||..... ....+... +.
T Consensus 155 ~~~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~-~~-- 224 (332)
T cd05614 155 FLSEEKER-------TYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRR-IL-- 224 (332)
T ss_pred ccccCCCc-------cccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHH-Hh--
Confidence 53322111 1234699999999999865 478899999999999999999999964321 01111111 00
Q ss_pred cCCCCCCCChhhHHHHHHHHHHHhhhccCCCCCh
Q 003384 690 LDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPEL 723 (824)
Q Consensus 690 ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~ 723 (824)
......+...+..+.+++.+||+.+|.+||+.
T Consensus 225 --~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~ 256 (332)
T cd05614 225 --KCDPPFPSFIGPEAQDLLHKLLRKDPKKRLGA 256 (332)
T ss_pred --cCCCCCCCCCCHHHHHHHHHHcCCCHHHcCCC
Confidence 11122344456789999999999999999953
No 107
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=6.9e-36 Score=317.18 Aligned_cols=247 Identities=29% Similarity=0.405 Sum_probs=196.1
Q ss_pred CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCC--CchhHHHHHHHHHhcCCCc-eeeEecccC--C------c
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPN-LVTLVGACP--E------V 531 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~--~~~~f~~Ei~iL~~l~Hpn-Iv~L~g~~~--~------~ 531 (824)
.|....+||+|+||+||+|+.. |..||+|.+...... -+....+|+.+|+.|+|+| ||+|++++. + .
T Consensus 12 ~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~ 91 (323)
T KOG0594|consen 12 DYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGK 91 (323)
T ss_pred HHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccce
Confidence 4666678999999999999875 678999999876442 4567889999999999999 999999882 2 5
Q ss_pred eEEEEEecCCCChhhhhhccCCC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccc
Q 003384 532 WTLVYEYLPNGSLEDRLSCKDNS-PPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGIS 610 (824)
Q Consensus 532 ~~LV~Ey~~ggsL~~~L~~~~~~-~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla 610 (824)
+++|+||+. -+|..++...... ..++...+..++.||+.||+|||+ ++|+||||||+||||+++|.+||+|||+|
T Consensus 92 l~lvfe~~d-~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~---~~IlHRDLKPQNlLi~~~G~lKlaDFGlA 167 (323)
T KOG0594|consen 92 LYLVFEFLD-RDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHS---HGILHRDLKPQNLLISSSGVLKLADFGLA 167 (323)
T ss_pred EEEEEEeec-ccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHh---CCeecccCCcceEEECCCCcEeeeccchH
Confidence 789999995 5899888544321 356778899999999999999999 89999999999999999999999999999
Q ss_pred cccccccccCCCccccccCCCCCCcccCChhhhccC-CCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccc
Q 003384 611 RFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNL 689 (824)
Q Consensus 611 ~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ 689 (824)
+.+.-... ..+..++|.+|.|||++.+. .|++..||||+|||++||+++++.|.+..+.........+.
T Consensus 168 ra~~ip~~--------~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~l-- 237 (323)
T KOG0594|consen 168 RAFSIPMR--------TYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLL-- 237 (323)
T ss_pred HHhcCCcc--------cccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHc--
Confidence 95542221 12556789999999999887 79999999999999999999999999887765544332111
Q ss_pred cCCCCCCCChhh-------------------------HHHHHHHHHHHhhhccCCCCChHH
Q 003384 690 LDPLAGDWPFVQ-------------------------AEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 690 ld~~~~~~p~~~-------------------------~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
-.|....||... ..+..+++.+|++.+|.+|.+...
T Consensus 238 GtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~ 298 (323)
T KOG0594|consen 238 GTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKG 298 (323)
T ss_pred CCCCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHH
Confidence 111112222111 137889999999999999999843
No 108
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=1.8e-36 Score=333.13 Aligned_cols=232 Identities=22% Similarity=0.263 Sum_probs=185.9
Q ss_pred ceeeecCceEEEEEEEC--CeEEEEEEecCCCC---CCchhHHHHHHHHHhcCCCceeeEecccC--CceEEEEEecCCC
Q 003384 470 LKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYLPNG 542 (824)
Q Consensus 470 ~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~---~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~Ey~~gg 542 (824)
+.||+|+||.||++... +..||+|++..... .....+..|+.++..++||||+++++++. +..++||||+++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 36999999999999874 57899999875422 22345778999999999999999998873 4689999999999
Q ss_pred ChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccccCCC
Q 003384 543 SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNN 622 (824)
Q Consensus 543 sL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~~~~ 622 (824)
+|.+++.. ...+++..+..++.||+.||.|||+. +||+||||||+|||++.++.+||+|||+++........
T Consensus 81 ~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~lH~~--~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~--- 152 (325)
T cd05594 81 ELFFHLSR---ERVFSEDRARFYGAEIVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--- 152 (325)
T ss_pred cHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhc--CCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCcc---
Confidence 99988843 34689999999999999999999962 58999999999999999999999999998753322111
Q ss_pred ccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCCCCChhhH
Q 003384 623 TTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQA 702 (824)
Q Consensus 623 ~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~ 702 (824)
.....||+.|+|||++.+..++.++|||||||+||+|+||+.||............ ......+|...+
T Consensus 153 -----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i-------~~~~~~~p~~~~ 220 (325)
T cd05594 153 -----MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELI-------LMEEIRFPRTLS 220 (325)
T ss_pred -----cccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHH-------hcCCCCCCCCCC
Confidence 12345999999999999999999999999999999999999999755432211110 011112344556
Q ss_pred HHHHHHHHHHhhhccCCCC
Q 003384 703 EQLANLAMRCCEMSRKSRP 721 (824)
Q Consensus 703 ~~l~~Li~~Cl~~~P~~RP 721 (824)
..+.+|+.+||+.+|.+|+
T Consensus 221 ~~~~~li~~~L~~dP~~R~ 239 (325)
T cd05594 221 PEAKSLLSGLLKKDPKQRL 239 (325)
T ss_pred HHHHHHHHHHhhcCHHHhC
Confidence 7899999999999999997
No 109
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=6e-36 Score=322.70 Aligned_cols=257 Identities=25% Similarity=0.408 Sum_probs=202.0
Q ss_pred hcCCCCccceeeecCceEEEEEEECC-------eEEEEEEecCCCC-CCchhHHHHHHHHHhc-CCCceeeEecccC--C
Q 003384 462 ATHNFDPSLKIGEGGYGSIYKGLLRH-------MQVAIKMLHPHSL-QGPSEFQQEIDILSKI-RHPNLVTLVGACP--E 530 (824)
Q Consensus 462 ~~~~f~~~~~LG~G~fG~Vykg~~~~-------~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l-~HpnIv~L~g~~~--~ 530 (824)
..++|+..+.||+|+||.||+|...+ ..||+|.+..... .....+.+|++++.++ +||||++++++|. .
T Consensus 10 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~ 89 (293)
T cd05053 10 PRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEG 89 (293)
T ss_pred CHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCC
Confidence 34568888999999999999998642 5799999875422 2234588999999999 8999999999884 3
Q ss_pred ceEEEEEecCCCChhhhhhcc-------------CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEec
Q 003384 531 VWTLVYEYLPNGSLEDRLSCK-------------DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLD 597 (824)
Q Consensus 531 ~~~LV~Ey~~ggsL~~~L~~~-------------~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld 597 (824)
..++||||+++|+|.+++... .....+++..++.++.|++.||.|||+ ++|+||||||+|||++
T Consensus 90 ~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~---~~ivH~dlkp~Nil~~ 166 (293)
T cd05053 90 PLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLAS---KKCIHRDLAARNVLVT 166 (293)
T ss_pred CeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHH---CCccccccceeeEEEc
Confidence 588999999999999998532 224568999999999999999999998 8999999999999999
Q ss_pred CCCcceeeccccccccccccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHh-CCCCCCCchH
Q 003384 598 ANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKE 676 (824)
Q Consensus 598 ~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELlt-G~~Pf~~~~~ 676 (824)
.++.+||+|||+++.+........ .....++..|+|||++.+..++.++|||||||++|||++ |..||.....
T Consensus 167 ~~~~~kL~Dfg~~~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~ 240 (293)
T cd05053 167 EDHVMKIADFGLARDIHHIDYYRK------TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPV 240 (293)
T ss_pred CCCeEEeCccccccccccccceec------cCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCH
Confidence 999999999999987654321111 122345778999999988899999999999999999998 9999975443
Q ss_pred HHHHHhhhccccccCCCCCCCChhhHHHHHHHHHHHhhhccCCCCChHHHHHHHHHHH
Q 003384 677 VQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM 734 (824)
Q Consensus 677 ~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le~l 734 (824)
....... ........+...+..+.+|+.+||..+|++||++ +++++.|+.+
T Consensus 241 ~~~~~~~------~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~-~eil~~l~~~ 291 (293)
T cd05053 241 EELFKLL------KEGYRMEKPQNCTQELYHLMRDCWHEVPSQRPTF-KQLVEDLDRM 291 (293)
T ss_pred HHHHHHH------HcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCH-HHHHHHHHHh
Confidence 2211100 0111122344556789999999999999999999 6777777654
No 110
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=4e-36 Score=329.79 Aligned_cols=231 Identities=26% Similarity=0.354 Sum_probs=185.8
Q ss_pred eeeecCceEEEEEEEC--CeEEEEEEecCCC---CCCchhHHHHHHHHHhc-CCCceeeEecccC--CceEEEEEecCCC
Q 003384 471 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHS---LQGPSEFQQEIDILSKI-RHPNLVTLVGACP--EVWTLVYEYLPNG 542 (824)
Q Consensus 471 ~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~---~~~~~~f~~Ei~iL~~l-~HpnIv~L~g~~~--~~~~LV~Ey~~gg 542 (824)
.||+|+||.||+|... +..||||++.... ......+..|..++..+ +||||+++++++. +..++||||+++|
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 81 (321)
T cd05591 2 VLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNGG 81 (321)
T ss_pred ccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCCC
Confidence 5999999999999886 4689999987532 22234577899999876 7999999999884 4689999999999
Q ss_pred ChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccccCCC
Q 003384 543 SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNN 622 (824)
Q Consensus 543 sL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~~~~ 622 (824)
+|.+.+.. ...+++..+..++.+++.||.|||+ ++|+||||||+|||++.++.+||+|||++.........
T Consensus 82 ~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~--- 152 (321)
T cd05591 82 DLMFQIQR---SRKFDEPRSRFYAAEVTLALMFLHR---HGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVT--- 152 (321)
T ss_pred cHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEEeecccceecccCCcc---
Confidence 99988843 3468899999999999999999999 89999999999999999999999999998753222110
Q ss_pred ccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCCCCChhhH
Q 003384 623 TTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQA 702 (824)
Q Consensus 623 ~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~ 702 (824)
.....||+.|+|||++.+..++.++|||||||++|+|+||++||............ .. .....|...+
T Consensus 153 -----~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i--~~-----~~~~~p~~~~ 220 (321)
T cd05591 153 -----TTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESI--LH-----DDVLYPVWLS 220 (321)
T ss_pred -----ccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHH--Hc-----CCCCCCCCCC
Confidence 12345899999999999989999999999999999999999999766543221111 00 0112233456
Q ss_pred HHHHHHHHHHhhhccCCCCC
Q 003384 703 EQLANLAMRCCEMSRKSRPE 722 (824)
Q Consensus 703 ~~l~~Li~~Cl~~~P~~RPt 722 (824)
..+.+++.+||+.+|.+||+
T Consensus 221 ~~~~~ll~~~L~~dp~~R~~ 240 (321)
T cd05591 221 KEAVSILKAFMTKNPNKRLG 240 (321)
T ss_pred HHHHHHHHHHhccCHHHcCC
Confidence 78999999999999999994
No 111
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.2e-36 Score=322.59 Aligned_cols=250 Identities=26% Similarity=0.377 Sum_probs=193.9
Q ss_pred cCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCCchhHHHHHHHHHhcCCCceeeEeccc----CC---ceE
Q 003384 463 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC----PE---VWT 533 (824)
Q Consensus 463 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~----~~---~~~ 533 (824)
+-.|...+++|.|+||.||+|... +..||||..-.+. +--.+|++||+.++|||||+|..+| +. ...
T Consensus 23 ~i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~----r~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~ln 98 (364)
T KOG0658|consen 23 EISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDK----RYKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLN 98 (364)
T ss_pred EEEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCC----CcCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHH
Confidence 345778899999999999999886 4789999875432 2335899999999999999998877 12 245
Q ss_pred EEEEecCCCChhhhhhcc-CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCC-Ccceeecccccc
Q 003384 534 LVYEYLPNGSLEDRLSCK-DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDAN-FVSKLSDFGISR 611 (824)
Q Consensus 534 LV~Ey~~ggsL~~~L~~~-~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~-~~vKL~DFGla~ 611 (824)
|||||||. +|...+... ..+..++...+.-+..||++||+|||. .||+||||||.|+|+|.+ |.+||||||.|+
T Consensus 99 lVleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~---~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK 174 (364)
T KOG0658|consen 99 LVLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHS---HGICHRDIKPQNLLVDPDTGVLKICDFGSAK 174 (364)
T ss_pred HHHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHh---cCcccCCCChheEEEcCCCCeEEeccCCcce
Confidence 89999975 888888532 234567777888899999999999999 899999999999999976 999999999999
Q ss_pred ccccccccCCCccccccCCCCCCcccCChhhhccC-CCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhcc----
Q 003384 612 FLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKL---- 686 (824)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~---- 686 (824)
.+..++.+. .. ..|..|.|||.+.+. .|+.+.||||.|||+.||+-|+|.|.+.....+....-++
T Consensus 175 ~L~~~epni--SY-------icSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~P 245 (364)
T KOG0658|consen 175 VLVKGEPNI--SY-------ICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTP 245 (364)
T ss_pred eeccCCCce--eE-------EEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCC
Confidence 887665331 11 248899999998875 7999999999999999999999999876655443321110
Q ss_pred ----------c--cccCC--CCCC----CChhhHHHHHHHHHHHhhhccCCCCChHHHHHH
Q 003384 687 ----------K--NLLDP--LAGD----WPFVQAEQLANLAMRCCEMSRKSRPELGKDVWR 729 (824)
Q Consensus 687 ----------~--~~ld~--~~~~----~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~ 729 (824)
. +...+ .... +....+.++.+|+.+++..+|..|.+..+.+..
T Consensus 246 t~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h 306 (364)
T KOG0658|consen 246 TREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAH 306 (364)
T ss_pred CHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcc
Confidence 0 11111 1111 334456799999999999999999998655543
No 112
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=6.2e-36 Score=321.23 Aligned_cols=252 Identities=24% Similarity=0.419 Sum_probs=197.6
Q ss_pred CCCccceeeecCceEEEEEEEC-------CeEEEEEEecCCCCCCchhHHHHHHHHHhcCCCceeeEecccC--CceEEE
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR-------HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLV 535 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~-------~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV 535 (824)
+|....+||+|+||.||++... +..+|+|.+..........|.+|+++++.++||||+++++++. +..++|
T Consensus 6 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 85 (280)
T cd05092 6 DIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLMV 85 (280)
T ss_pred hceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEEE
Confidence 5677789999999999999642 3579999887654444567999999999999999999999884 467899
Q ss_pred EEecCCCChhhhhhccCC------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcce
Q 003384 536 YEYLPNGSLEDRLSCKDN------------SPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSK 603 (824)
Q Consensus 536 ~Ey~~ggsL~~~L~~~~~------------~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vK 603 (824)
|||+++|+|.+++..... ...+++..++.++.|++.||.|||+ ++++||||||+|||++.++.+|
T Consensus 86 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~---~~i~H~dlkp~nil~~~~~~~k 162 (280)
T cd05092 86 FEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLAS---LHFVHRDLATRNCLVGQGLVVK 162 (280)
T ss_pred EecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHH---CCeecccccHhhEEEcCCCCEE
Confidence 999999999999864321 1358899999999999999999999 8999999999999999999999
Q ss_pred eeccccccccccccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHh-CCCCCCCchHHHHHHh
Q 003384 604 LSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALD 682 (824)
Q Consensus 604 L~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELlt-G~~Pf~~~~~~~~~~~ 682 (824)
|+|||++........... .....+++.|+|||++.+..++.++|||||||++|+|++ |.+||...........
T Consensus 163 L~dfg~~~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~ 236 (280)
T cd05092 163 IGDFGMSRDIYSTDYYRV------GGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIEC 236 (280)
T ss_pred ECCCCceeEcCCCceeec------CCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHH
Confidence 999999976543221110 122346789999999999999999999999999999998 9999964433221111
Q ss_pred hhccccccCCCCCCCChhhHHHHHHHHHHHhhhccCCCCChHHHHHHHHH
Q 003384 683 TGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLE 732 (824)
Q Consensus 683 ~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le 732 (824)
. ........+...+..+.+++.+||..+|.+||++ ++|...|+
T Consensus 237 ~------~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~-~~l~~~l~ 279 (280)
T cd05092 237 I------TQGRELERPRTCPPEVYAIMQGCWQREPQQRMVI-KDIHSRLQ 279 (280)
T ss_pred H------HcCccCCCCCCCCHHHHHHHHHHccCChhhCCCH-HHHHHHHh
Confidence 1 0111112233456789999999999999999999 66666654
No 113
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=8.5e-36 Score=333.06 Aligned_cols=251 Identities=23% Similarity=0.307 Sum_probs=188.3
Q ss_pred CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC---CCchhHHHHHHHHHhcCCCceeeEecccCC--ceEEEEE
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEIDILSKIRHPNLVTLVGACPE--VWTLVYE 537 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~---~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~~--~~~LV~E 537 (824)
+|+..+.||+|+||+||++... +..||||++..... .....+..|+.++..++||||+++++.+.+ ..++|||
T Consensus 2 ~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~E 81 (363)
T cd05628 2 DFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIME 81 (363)
T ss_pred CceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEEc
Confidence 6888899999999999999875 57899999875322 223467889999999999999999998843 6889999
Q ss_pred ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccccc
Q 003384 538 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNE 617 (824)
Q Consensus 538 y~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~ 617 (824)
|++||+|.+++.. ...+++..+..++.|++.||.|||+ +||+||||||+|||++.++.+||+|||+++.+....
T Consensus 82 ~~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~lH~---~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~ 155 (363)
T cd05628 82 FLPGGDMMTLLMK---KDTLTEEETQFYIAETVLAIDSIHQ---LGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAH 155 (363)
T ss_pred CCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEecCCCHHHeEECCCCCEEEeeccCcccccccc
Confidence 9999999999853 3568999999999999999999999 899999999999999999999999999998653221
Q ss_pred ccCCC---------------------------ccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCC
Q 003384 618 ISSNN---------------------------TTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPA 670 (824)
Q Consensus 618 ~~~~~---------------------------~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~P 670 (824)
..... ..........||+.|+|||++.+..++.++|||||||+||||++|++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~P 235 (363)
T cd05628 156 RTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPP 235 (363)
T ss_pred cccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCC
Confidence 10000 000001235799999999999999999999999999999999999999
Q ss_pred CCCchHHHHHHhhhccccccCCCCCCCChhhHHHHHHHHHHHhh--hccCCCCChH
Q 003384 671 LGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCE--MSRKSRPELG 724 (824)
Q Consensus 671 f~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~--~~P~~RPt~~ 724 (824)
|..................+. ... ....+..+.+++.+++. .++..||++.
T Consensus 236 f~~~~~~~~~~~i~~~~~~~~--~p~-~~~~s~~~~~li~~l~~~~~~r~~r~~~~ 288 (363)
T cd05628 236 FCSETPQETYKKVMNWKETLI--FPP-EVPISEKAKDLILRFCCEWEHRIGAPGVE 288 (363)
T ss_pred CCCCCHHHHHHHHHcCcCccc--CCC-cCCCCHHHHHHHHHHcCChhhcCCCCCHH
Confidence 976543322111111111000 000 11234577888877543 2334568873
No 114
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=8.5e-36 Score=320.17 Aligned_cols=257 Identities=28% Similarity=0.437 Sum_probs=197.6
Q ss_pred CCccceeeecCceEEEEEEE------CCeEEEEEEecCCCC-CCchhHHHHHHHHHhcCCCceeeEecccC----CceEE
Q 003384 466 FDPSLKIGEGGYGSIYKGLL------RHMQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGACP----EVWTL 534 (824)
Q Consensus 466 f~~~~~LG~G~fG~Vykg~~------~~~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~----~~~~L 534 (824)
|...+.||+|+||+||.+.+ .+..||+|.+..... .....|.+|+++|+.++||||++++++|. ...++
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (283)
T cd05080 6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQL 85 (283)
T ss_pred ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEE
Confidence 37788999999999988754 246799999875432 23456889999999999999999999873 24789
Q ss_pred EEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccc
Q 003384 535 VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLS 614 (824)
Q Consensus 535 V~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~ 614 (824)
||||+++|+|.+++.. ..+++..++.++.+++.||.|||+ ++|+||||||+|||++.++.+||+|||++..+.
T Consensus 86 v~e~~~~~~l~~~~~~----~~l~~~~~~~i~~~l~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~ 158 (283)
T cd05080 86 IMEYVPLGSLRDYLPK----HKLNLAQLLLFAQQICEGMAYLHS---QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVP 158 (283)
T ss_pred EecCCCCCCHHHHHHH----cCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccChheEEEcCCCcEEEeecccccccC
Confidence 9999999999999842 358999999999999999999999 899999999999999999999999999998665
Q ss_pred cccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHH-HHHHhh-------hcc
Q 003384 615 QNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEV-QYALDT-------GKL 686 (824)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~-~~~~~~-------~~~ 686 (824)
........ .....++..|+|||++.+..++.++|||||||++|+|+||..||...... ...... ..+
T Consensus 159 ~~~~~~~~-----~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 233 (283)
T cd05080 159 EGHEYYRV-----REDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRL 233 (283)
T ss_pred Ccchhhcc-----CCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhh
Confidence 33211100 12234677899999998888999999999999999999999998643211 111100 001
Q ss_pred ccccCC-CCCCCChhhHHHHHHHHHHHhhhccCCCCChHHHHHHHHHHHH
Q 003384 687 KNLLDP-LAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMR 735 (824)
Q Consensus 687 ~~~ld~-~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le~l~ 735 (824)
...++. .....+...+..+.+++.+||+.+|.+||++ +.+++.|+.+.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~-~~i~~~l~~~~ 282 (283)
T cd05080 234 IELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTF-RSLIPILKEMH 282 (283)
T ss_pred hhhhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCH-HHHHHHHHHhh
Confidence 111111 1112234456799999999999999999999 77878887653
No 115
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=3e-36 Score=331.10 Aligned_cols=237 Identities=24% Similarity=0.310 Sum_probs=185.9
Q ss_pred ceeeecCceEEEEEEEC--CeEEEEEEecCCCC---CCchhHHHHHH-HHHhcCCCceeeEeccc--CCceEEEEEecCC
Q 003384 470 LKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEID-ILSKIRHPNLVTLVGAC--PEVWTLVYEYLPN 541 (824)
Q Consensus 470 ~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~---~~~~~f~~Ei~-iL~~l~HpnIv~L~g~~--~~~~~LV~Ey~~g 541 (824)
+.||+|+||+||+|... +..||||++..... .....+..|.. +++.++||||+++++.+ .+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 36999999999999885 58899999865321 12234555555 46789999999999987 3468999999999
Q ss_pred CChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccccCC
Q 003384 542 GSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSN 621 (824)
Q Consensus 542 gsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~~~ 621 (824)
|+|.+++.. ...+++..+..++.||+.||.|||+ +||+||||||+|||++.++.+||+|||+++.......
T Consensus 81 g~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~--- 151 (323)
T cd05575 81 GELFFHLQR---ERSFPEPRARFYAAEIASALGYLHS---LNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSK--- 151 (323)
T ss_pred CCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCC---
Confidence 999998843 3468899999999999999999999 8999999999999999999999999999875322111
Q ss_pred CccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCCCCChhh
Q 003384 622 NTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQ 701 (824)
Q Consensus 622 ~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~ 701 (824)
......||+.|+|||++.+..++.++|||||||++|+|++|++||............ ... ....+...
T Consensus 152 -----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i--~~~-----~~~~~~~~ 219 (323)
T cd05575 152 -----TTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNI--LNK-----PLRLKPNI 219 (323)
T ss_pred -----ccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHH--HcC-----CCCCCCCC
Confidence 012346899999999999999999999999999999999999999765432211110 011 01122334
Q ss_pred HHHHHHHHHHHhhhccCCCCChHHHH
Q 003384 702 AEQLANLAMRCCEMSRKSRPELGKDV 727 (824)
Q Consensus 702 ~~~l~~Li~~Cl~~~P~~RPt~~~~v 727 (824)
+..+.+++.+||+.+|.+||+....+
T Consensus 220 ~~~~~~li~~~l~~~p~~R~~~~~~~ 245 (323)
T cd05575 220 SVSARHLLEGLLQKDRTKRLGAKDDF 245 (323)
T ss_pred CHHHHHHHHHHhhcCHHhCCCCCCCH
Confidence 67899999999999999999985333
No 116
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=4.5e-36 Score=333.94 Aligned_cols=239 Identities=26% Similarity=0.395 Sum_probs=183.7
Q ss_pred CCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCC-CchhHHHHHHHHHhcCCCceeeEecccC--CceEEEEEecC
Q 003384 466 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYLP 540 (824)
Q Consensus 466 f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~Ey~~ 540 (824)
|...++||+|+||.||+|.+. +..||||++...... ....+.+|+.+++.++||||+++++++. ...++||||++
T Consensus 76 ~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 155 (353)
T PLN00034 76 LERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFMD 155 (353)
T ss_pred HhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecCC
Confidence 455678999999999999875 588999998654322 2356889999999999999999999884 46889999999
Q ss_pred CCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccccC
Q 003384 541 NGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISS 620 (824)
Q Consensus 541 ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~~ 620 (824)
+|+|.+.. .++...+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+++.+......
T Consensus 156 ~~~L~~~~-------~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~- 224 (353)
T PLN00034 156 GGSLEGTH-------IADEQFLADVARQILSGIAYLHR---RHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDP- 224 (353)
T ss_pred CCcccccc-------cCCHHHHHHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEcCCCCEEEcccccceeccccccc-
Confidence 99986543 24567788999999999999999 89999999999999999999999999999865432111
Q ss_pred CCccccccCCCCCCcccCChhhhcc-----CCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCC
Q 003384 621 NNTTLCCRTDPKGTFAYMDPEFLAS-----GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAG 695 (824)
Q Consensus 621 ~~~~~~~~~~~~GT~~Y~APE~l~~-----~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~ 695 (824)
.....||..|+|||++.. ...+.++|||||||++|||++|+.||............... ......
T Consensus 225 -------~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~---~~~~~~ 294 (353)
T PLN00034 225 -------CNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAI---CMSQPP 294 (353)
T ss_pred -------ccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHH---hccCCC
Confidence 123469999999998743 23456899999999999999999999733211100000000 000111
Q ss_pred CCChhhHHHHHHHHHHHhhhccCCCCChHH
Q 003384 696 DWPFVQAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 696 ~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
..+...+..+.+|+.+||+.+|.+||++.+
T Consensus 295 ~~~~~~~~~l~~li~~~l~~~P~~Rpt~~e 324 (353)
T PLN00034 295 EAPATASREFRHFISCCLQREPAKRWSAMQ 324 (353)
T ss_pred CCCCccCHHHHHHHHHHccCChhhCcCHHH
Confidence 223445678999999999999999999943
No 117
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=2.1e-36 Score=333.54 Aligned_cols=240 Identities=22% Similarity=0.276 Sum_probs=185.9
Q ss_pred ceeeecCceEEEEEEEC--CeEEEEEEecCCCC---CCchhHHHHHHHHHhc-CCCceeeEeccc--CCceEEEEEecCC
Q 003384 470 LKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEIDILSKI-RHPNLVTLVGAC--PEVWTLVYEYLPN 541 (824)
Q Consensus 470 ~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~---~~~~~f~~Ei~iL~~l-~HpnIv~L~g~~--~~~~~LV~Ey~~g 541 (824)
+.||+|+||.||+|... +..||+|++..... .....+..|+.++.++ +||||+++++++ .+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 36999999999999876 47899999876422 2234577899998877 799999999987 4568999999999
Q ss_pred CChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccccCC
Q 003384 542 GSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSN 621 (824)
Q Consensus 542 gsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~~~ 621 (824)
|+|..++.. ...+++..+..++.+++.||.|||+ ++|+||||||+|||++.++.+||+|||+++........
T Consensus 81 ~~L~~~~~~---~~~l~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~-- 152 (329)
T cd05618 81 GDLMFHMQR---QRKLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT-- 152 (329)
T ss_pred CCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCc--
Confidence 999988843 3468999999999999999999999 89999999999999999999999999998753221110
Q ss_pred CccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHH--HHhhhccccccCCCCCCCCh
Q 003384 622 NTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQY--ALDTGKLKNLLDPLAGDWPF 699 (824)
Q Consensus 622 ~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~--~~~~~~~~~~ld~~~~~~p~ 699 (824)
.....||+.|+|||++.+..++.++|||||||++|+|+||++||........ ......+...+.......|.
T Consensus 153 ------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~ 226 (329)
T cd05618 153 ------TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR 226 (329)
T ss_pred ------cccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCCCCCC
Confidence 1234689999999999999999999999999999999999999952110000 00000000001111122345
Q ss_pred hhHHHHHHHHHHHhhhccCCCCCh
Q 003384 700 VQAEQLANLAMRCCEMSRKSRPEL 723 (824)
Q Consensus 700 ~~~~~l~~Li~~Cl~~~P~~RPt~ 723 (824)
..+..+.+++.+||+.+|.+||+.
T Consensus 227 ~~~~~~~~ll~~~L~~dP~~R~~~ 250 (329)
T cd05618 227 SLSVKAASVLKSFLNKDPKERLGC 250 (329)
T ss_pred CCCHHHHHHHHHHhcCCHHHcCCC
Confidence 566789999999999999999984
No 118
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=1.2e-36 Score=333.34 Aligned_cols=235 Identities=28% Similarity=0.335 Sum_probs=189.5
Q ss_pred ceeeecCceEEEEEEE-----CCeEEEEEEecCCCC--CCchhHHHHHHHHHhcCCCceeeEecccC--CceEEEEEecC
Q 003384 470 LKIGEGGYGSIYKGLL-----RHMQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYLP 540 (824)
Q Consensus 470 ~~LG~G~fG~Vykg~~-----~~~~VAvK~l~~~~~--~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~Ey~~ 540 (824)
+.||+|+||.||++.. .+..||+|++..... .....+..|+.+|++++||||+++++++. ...++||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 4699999999998864 357899999875322 22345778999999999999999999884 46889999999
Q ss_pred CCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccccC
Q 003384 541 NGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISS 620 (824)
Q Consensus 541 ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~~ 620 (824)
+|+|.+++.. ...+++..+..++.|++.||.|||+ ++|+||||||+|||++.++.+||+|||++.........
T Consensus 82 ~~~L~~~l~~---~~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~- 154 (318)
T cd05582 82 GGDLFTRLSK---EVMFTEEDVKFYLAELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKK- 154 (318)
T ss_pred CCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCc-
Confidence 9999999843 3468999999999999999999999 89999999999999999999999999998754332110
Q ss_pred CCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCCCCChh
Q 003384 621 NNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFV 700 (824)
Q Consensus 621 ~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~ 700 (824)
.....||+.|+|||++.+..++.++|||||||++|+|+||+.||............. . .....|..
T Consensus 155 -------~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~--~-----~~~~~p~~ 220 (318)
T cd05582 155 -------AYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMIL--K-----AKLGMPQF 220 (318)
T ss_pred -------eecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHH--c-----CCCCCCCC
Confidence 123468999999999998889999999999999999999999997654332211110 0 01123444
Q ss_pred hHHHHHHHHHHHhhhccCCCCChHH
Q 003384 701 QAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 701 ~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
.+..+.+|+.+||+.+|.+||++.+
T Consensus 221 ~~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 221 LSPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred CCHHHHHHHHHHhhcCHhHcCCCCC
Confidence 5678999999999999999999633
No 119
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=1.1e-35 Score=313.18 Aligned_cols=244 Identities=28% Similarity=0.433 Sum_probs=190.5
Q ss_pred eeeecCceEEEEEEEC--CeEEEEEEecCCCC-CCchhHHHHHHHHHhcCCCceeeEecccC--CceEEEEEecCCCChh
Q 003384 471 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYLPNGSLE 545 (824)
Q Consensus 471 ~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~Ey~~ggsL~ 545 (824)
.||+|+||.||+|.+. ++.||+|.+..... .....+.+|+++++.++||||++++++|. ...++||||+++++|.
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 81 (252)
T cd05084 2 RIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFL 81 (252)
T ss_pred ccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcHH
Confidence 5999999999999874 68899998764322 12356899999999999999999999884 4678999999999999
Q ss_pred hhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccccCCCccc
Q 003384 546 DRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTL 625 (824)
Q Consensus 546 ~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~~~~~~~ 625 (824)
+++... ...+++..++.++.|++.||.|||+ ++|+||||||+|||++.++.+||+|||++...........
T Consensus 82 ~~~~~~--~~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~---- 152 (252)
T cd05084 82 TFLRTE--GPRLKVKELIQMVENAAAGMEYLES---KHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYAST---- 152 (252)
T ss_pred HHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHh---CCccccccchheEEEcCCCcEEECccccCccccccccccc----
Confidence 998532 3468899999999999999999999 8999999999999999999999999999875432211100
Q ss_pred cccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHh-CCCCCCCchHHHHHHhhhccccccCCCCCCCChhhHHH
Q 003384 626 CCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQ 704 (824)
Q Consensus 626 ~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELlt-G~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~ 704 (824)
.....++..|+|||.+.++.++.++|||||||++|+|++ |.+||............. . ......+...+..
T Consensus 153 --~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~---~---~~~~~~~~~~~~~ 224 (252)
T cd05084 153 --GGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIE---Q---GVRLPCPELCPDA 224 (252)
T ss_pred --CCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHH---c---CCCCCCcccCCHH
Confidence 011224567999999998899999999999999999998 999996443221111100 0 1111234445678
Q ss_pred HHHHHHHHhhhccCCCCChHHHHHHHHH
Q 003384 705 LANLAMRCCEMSRKSRPELGKDVWRVLE 732 (824)
Q Consensus 705 l~~Li~~Cl~~~P~~RPt~~~~v~~~Le 732 (824)
+.+++.+|++.+|.+||++ .++.+.|.
T Consensus 225 ~~~li~~~l~~~p~~Rps~-~~~~~~l~ 251 (252)
T cd05084 225 VYRLMERCWEYDPGQRPSF-STVHQELQ 251 (252)
T ss_pred HHHHHHHHcCCChhhCcCH-HHHHHHHh
Confidence 9999999999999999999 66666553
No 120
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.5e-36 Score=333.11 Aligned_cols=247 Identities=26% Similarity=0.402 Sum_probs=207.7
Q ss_pred CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCCc--hhHHHHHHHHHhcCCCceeeEecccCC--c-eEEEE
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGP--SEFQQEIDILSKIRHPNLVTLVGACPE--V-WTLVY 536 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~--~~f~~Ei~iL~~l~HpnIv~L~g~~~~--~-~~LV~ 536 (824)
.+|...++||+|+||.++..+.+ ++.+++|.+.......+ ....+|+.+++++.|||||.+.++|.+ . .+|||
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm 83 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM 83 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence 47888999999999999877655 57899999987654443 357899999999999999999999943 4 78999
Q ss_pred EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccc
Q 003384 537 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQN 616 (824)
Q Consensus 537 Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~ 616 (824)
+||+||+|.+.+.+.+ +..++...+..|+.|++.||.|||. +.|+|||||+.|||++.++.|||+|||+|+.+...
T Consensus 84 ~Y~eGg~l~~~i~~~k-~~~f~E~~i~~~~~Q~~~av~ylH~---~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~ 159 (426)
T KOG0589|consen 84 EYCEGGDLAQLIKEQK-GVLFPEERILKWFVQILLAVNYLHE---NRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPE 159 (426)
T ss_pred eecCCCCHHHHHHHHh-hccccHHHHHHHHHHHHHHHHHHHh---hhhhcccchhhhhhccccCceeecchhhhhhcCCc
Confidence 9999999999996554 5679999999999999999999998 78999999999999999999999999999988765
Q ss_pred cccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCCC
Q 003384 617 EISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGD 696 (824)
Q Consensus 617 ~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~ 696 (824)
... ....+||+.||+||++.+.+|+.|+|||||||++|||++=+++|...+......... ...+.|
T Consensus 160 ~~~--------a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~--~~~~~P---- 225 (426)
T KOG0589|consen 160 DSL--------ASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKIN--RGLYSP---- 225 (426)
T ss_pred hhh--------hheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHh--hccCCC----
Confidence 411 134579999999999999999999999999999999999999998776544433322 222333
Q ss_pred CChhhHHHHHHHHHHHhhhccCCCCChHHHHH
Q 003384 697 WPFVQAEQLANLAMRCCEMSRKSRPELGKDVW 728 (824)
Q Consensus 697 ~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~ 728 (824)
.|...+.++..++..|+..+|..||+..+.+.
T Consensus 226 lp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~ 257 (426)
T KOG0589|consen 226 LPSMYSSELRSLVKSMLRKNPEHRPSALELLR 257 (426)
T ss_pred CCccccHHHHHHHHHHhhcCCccCCCHHHHhh
Confidence 45566789999999999999999999955443
No 121
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=6.7e-36 Score=319.11 Aligned_cols=253 Identities=25% Similarity=0.407 Sum_probs=198.8
Q ss_pred CCCCccceeeecCceEEEEEEECC-------eEEEEEEecCCCC-CCchhHHHHHHHHHhcCCCceeeEecccC--CceE
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLLRH-------MQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWT 533 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~~~-------~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~ 533 (824)
++|.....||+|+||.||+|...+ ..||+|.+..... .....+.+|+.+++.++||||++++|++. ...+
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~ 85 (277)
T cd05032 6 EKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPTL 85 (277)
T ss_pred HHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCcE
Confidence 468888999999999999998753 5699999865432 22346889999999999999999999874 4688
Q ss_pred EEEEecCCCChhhhhhccCC-------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeec
Q 003384 534 LVYEYLPNGSLEDRLSCKDN-------SPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSD 606 (824)
Q Consensus 534 LV~Ey~~ggsL~~~L~~~~~-------~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~D 606 (824)
+||||+++|+|.+++..... ...+++..++.++.+++.||.|||+ ++|+||||||+|||++.++.+||+|
T Consensus 86 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~di~p~nill~~~~~~kl~d 162 (277)
T cd05032 86 VVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAA---KKFVHRDLAARNCMVAEDLTVKIGD 162 (277)
T ss_pred EEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHh---CCccccccChheEEEcCCCCEEECC
Confidence 99999999999999864321 2347889999999999999999999 8999999999999999999999999
Q ss_pred cccccccccccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHh-CCCCCCCchHHHHHHhhhc
Q 003384 607 FGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGK 685 (824)
Q Consensus 607 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELlt-G~~Pf~~~~~~~~~~~~~~ 685 (824)
||+++.+........ .....++..|+|||.+.++.++.++|||||||++|||+| |.+||............
T Consensus 163 fg~~~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~-- 234 (277)
T cd05032 163 FGMTRDIYETDYYRK------GGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFV-- 234 (277)
T ss_pred cccchhhccCccccc------CCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHH--
Confidence 999986544322111 123346889999999988889999999999999999998 99999654332211111
Q ss_pred cccccCCCCCCCChhhHHHHHHHHHHHhhhccCCCCChHHHHHHHHH
Q 003384 686 LKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLE 732 (824)
Q Consensus 686 ~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le 732 (824)
........|...+..+.+++.+||+.+|.+||++ .++...|+
T Consensus 235 ----~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~-~~l~~~l~ 276 (277)
T cd05032 235 ----IDGGHLDLPENCPDKLLELMRMCWQYNPKMRPTF-LEIVSSLK 276 (277)
T ss_pred ----hcCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCH-HHHHHHhc
Confidence 0111112234456789999999999999999999 66655553
No 122
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=4.4e-36 Score=336.74 Aligned_cols=247 Identities=23% Similarity=0.308 Sum_probs=189.3
Q ss_pred CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCC---CCCchhHHHHHHHHHhcCCCceeeEecccC--CceEEEEE
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS---LQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYE 537 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~---~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~E 537 (824)
+|...+.||+|+||.||++... +..||||++.... ......+.+|+.+|+.++||||+++++.+. +..++|||
T Consensus 2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E 81 (376)
T cd05598 2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (376)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEe
Confidence 6888999999999999999875 5789999986432 122456889999999999999999999884 46889999
Q ss_pred ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccccc
Q 003384 538 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNE 617 (824)
Q Consensus 538 y~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~ 617 (824)
|+++|+|.+++.. ...++......++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+|..+....
T Consensus 82 ~~~~g~L~~~i~~---~~~~~~~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~ 155 (376)
T cd05598 82 YIPGGDMMSLLIR---LGIFEEDLARFYIAELTCAIESVHK---MGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH 155 (376)
T ss_pred CCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCCHHHEEECCCCCEEEEeCCCCccccccc
Confidence 9999999999853 3458888889999999999999999 899999999999999999999999999986432100
Q ss_pred ccC----------------------C-------------CccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHH
Q 003384 618 ISS----------------------N-------------NTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILL 662 (824)
Q Consensus 618 ~~~----------------------~-------------~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ 662 (824)
... . ....+......||+.|+|||++.+..++.++|||||||+||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvily 235 (376)
T cd05598 156 DSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILY 235 (376)
T ss_pred cccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceee
Confidence 000 0 00000112347999999999999999999999999999999
Q ss_pred HHHhCCCCCCCchHHHHHHhhhccccccCCCCCCCChhhHHHHHHHHHHHhhhccCCCC
Q 003384 663 RLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRP 721 (824)
Q Consensus 663 ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RP 721 (824)
||+||++||..................+ ........+..+.+++.+|+ .+|.+|+
T Consensus 236 ell~G~~Pf~~~~~~~~~~~i~~~~~~~---~~~~~~~~s~~~~~li~~l~-~~p~~R~ 290 (376)
T cd05598 236 EMLVGQPPFLADTPAETQLKVINWETTL---HIPSQAKLSREASDLILRLC-CGAEDRL 290 (376)
T ss_pred ehhhCCCCCCCCCHHHHHHHHhccCccc---cCCCCCCCCHHHHHHHHHHh-cCHhhcC
Confidence 9999999997665433222111111111 11111234567888888876 5999999
No 123
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=1.7e-35 Score=319.36 Aligned_cols=259 Identities=27% Similarity=0.448 Sum_probs=199.2
Q ss_pred CCCCccceeeecCceEEEEEEECC------------------eEEEEEEecCCCCC-CchhHHHHHHHHHhcCCCceeeE
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLLRH------------------MQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTL 524 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~~~------------------~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIv~L 524 (824)
.+|.+.+.||+|+||.||+|.... ..||+|.+...... ....+.+|++++++++||||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~ 84 (296)
T cd05051 5 QPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARL 84 (296)
T ss_pred hhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeEE
Confidence 468888999999999999987642 45899998754322 24578899999999999999999
Q ss_pred ecccC--CceEEEEEecCCCChhhhhhccC--------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcE
Q 003384 525 VGACP--EVWTLVYEYLPNGSLEDRLSCKD--------NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANI 594 (824)
Q Consensus 525 ~g~~~--~~~~LV~Ey~~ggsL~~~L~~~~--------~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NI 594 (824)
+++|. +..++||||+++++|.+++.... ....+++..++.++.+++.||.|||+ ++|+||||||+||
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~---~~i~H~dlkp~Ni 161 (296)
T cd05051 85 LGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLES---LNFVHRDLATRNC 161 (296)
T ss_pred EEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHH---cCccccccchhce
Confidence 99884 46889999999999999985432 12368999999999999999999999 8999999999999
Q ss_pred EecCCCcceeeccccccccccccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHh--CCCCCC
Q 003384 595 LLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT--GRPALG 672 (824)
Q Consensus 595 Lld~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELlt--G~~Pf~ 672 (824)
|++.++.++|+|||+++.......... .....+++.|+|||++.+..++.++|||||||++|||++ |..||.
T Consensus 162 li~~~~~~~l~dfg~~~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~ 235 (296)
T cd05051 162 LVGKNYTIKIADFGMSRNLYSSDYYRV------QGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYE 235 (296)
T ss_pred eecCCCceEEccccceeecccCcceee------cCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCC
Confidence 999999999999999876543321111 123457889999999998889999999999999999998 778886
Q ss_pred CchHHHHHHhhhccc-cccCCCCCCCChhhHHHHHHHHHHHhhhccCCCCChHHHHHHHHH
Q 003384 673 ITKEVQYALDTGKLK-NLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLE 732 (824)
Q Consensus 673 ~~~~~~~~~~~~~~~-~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le 732 (824)
............... ..........+...+..+.+++.+||+.+|.+||++ .++.+.|+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~-~el~~~L~ 295 (296)
T cd05051 236 HLTDQQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTF-REIHLFLQ 295 (296)
T ss_pred CcChHHHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCH-HHHHHHhc
Confidence 543222111111110 000111112233455789999999999999999999 66666654
No 124
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=7e-36 Score=327.76 Aligned_cols=239 Identities=25% Similarity=0.334 Sum_probs=186.6
Q ss_pred eeeecCceEEEEEEEC--CeEEEEEEecCCCC---CCchhHHHHHH-HHHhcCCCceeeEecccC--CceEEEEEecCCC
Q 003384 471 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEID-ILSKIRHPNLVTLVGACP--EVWTLVYEYLPNG 542 (824)
Q Consensus 471 ~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~---~~~~~f~~Ei~-iL~~l~HpnIv~L~g~~~--~~~~LV~Ey~~gg 542 (824)
.||+|+||.||+|... +..||+|++..... .....+..|.. +++.++||||+++++++. +..++||||++||
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 81 (321)
T cd05603 2 VIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNGG 81 (321)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCCC
Confidence 6999999999999885 57899999865321 12234555554 678899999999999873 4689999999999
Q ss_pred ChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccccCCC
Q 003384 543 SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNN 622 (824)
Q Consensus 543 sL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~~~~ 622 (824)
+|...+.. ...++...+..++.||+.||.|||+ ++|+||||||+||||+.++.+||+|||+++........
T Consensus 82 ~L~~~l~~---~~~~~~~~~~~~~~qi~~~L~~lH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~--- 152 (321)
T cd05603 82 ELFFHLQR---ERCFLEPRARFYAAEVASAIGYLHS---LNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEET--- 152 (321)
T ss_pred CHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCc---
Confidence 99988842 3468888899999999999999999 89999999999999999999999999998753221110
Q ss_pred ccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCCCCChhhH
Q 003384 623 TTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQA 702 (824)
Q Consensus 623 ~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~ 702 (824)
.....||+.|+|||++.+..++.++|||||||++|||++|++||...+.... ... .... ....|....
T Consensus 153 -----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~-~~~-i~~~-----~~~~~~~~~ 220 (321)
T cd05603 153 -----TSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQM-YDN-ILHK-----PLQLPGGKT 220 (321)
T ss_pred -----cccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHH-HHH-HhcC-----CCCCCCCCC
Confidence 1234689999999999988999999999999999999999999976543221 111 0111 112344456
Q ss_pred HHHHHHHHHHhhhccCCCCChHHHHHHH
Q 003384 703 EQLANLAMRCCEMSRKSRPELGKDVWRV 730 (824)
Q Consensus 703 ~~l~~Li~~Cl~~~P~~RPt~~~~v~~~ 730 (824)
..+.+++.+||+.+|.+||+....+.++
T Consensus 221 ~~~~~li~~~l~~~p~~R~~~~~~~~~~ 248 (321)
T cd05603 221 VAACDLLVGLLHKDQRRRLGAKADFLEI 248 (321)
T ss_pred HHHHHHHHHHccCCHhhcCCCCCCHHHH
Confidence 7899999999999999999874444333
No 125
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=1.6e-35 Score=313.81 Aligned_cols=251 Identities=30% Similarity=0.494 Sum_probs=201.3
Q ss_pred CCCCccceeeecCceEEEEEEEC-CeEEEEEEecCCCCCCchhHHHHHHHHHhcCCCceeeEecccC-CceEEEEEecCC
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP-EVWTLVYEYLPN 541 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~~-~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~-~~~~LV~Ey~~g 541 (824)
..|...++||+|+||.||+|... +..||+|.+.... .....+.+|+.+++.++||||+++++++. +..++||||+++
T Consensus 6 ~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~~~ 84 (260)
T cd05067 6 ETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGS-MSPEAFLAEANLMKQLQHPRLVRLYAVVTQEPIYIITEYMEN 84 (260)
T ss_pred HHceeeeeeccCccceEEeeecCCCceEEEEEecCCC-CcHHHHHHHHHHHHhcCCcCeeeEEEEEccCCcEEEEEcCCC
Confidence 46888899999999999999875 4789999987543 34567999999999999999999999874 467899999999
Q ss_pred CChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccccCC
Q 003384 542 GSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSN 621 (824)
Q Consensus 542 gsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~~~ 621 (824)
|+|.+++.... ...+++..+..++.+++.||.|||+ .+++||||||+||+++.++.++|+|||++..........
T Consensus 85 ~~L~~~~~~~~-~~~~~~~~~~~i~~~i~~al~~LH~---~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~- 159 (260)
T cd05067 85 GSLVDFLKTPE-GIKLTINKLIDMAAQIAEGMAFIER---KNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEYTA- 159 (260)
T ss_pred CCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHhc---CCeecccccHHhEEEcCCCCEEEccCcceeecCCCCccc-
Confidence 99999885432 3568999999999999999999999 889999999999999999999999999997665322111
Q ss_pred CccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHh-CCCCCCCchHHHHHHhhhccccccCCCCCCCChh
Q 003384 622 NTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWPFV 700 (824)
Q Consensus 622 ~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELlt-G~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~ 700 (824)
.....++..|+|||++.+..++.++|||||||++|+|++ |++||............. .. .....+..
T Consensus 160 ------~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~---~~---~~~~~~~~ 227 (260)
T cd05067 160 ------REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLE---RG---YRMPRPDN 227 (260)
T ss_pred ------ccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHH---cC---CCCCCCCC
Confidence 122346789999999998899999999999999999999 999997544322111110 00 11112334
Q ss_pred hHHHHHHHHHHHhhhccCCCCChHHHHHHHHHH
Q 003384 701 QAEQLANLAMRCCEMSRKSRPELGKDVWRVLEP 733 (824)
Q Consensus 701 ~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le~ 733 (824)
.+..+.+++.+|++.+|.+||++ +.+...|+.
T Consensus 228 ~~~~~~~li~~~l~~~p~~Rp~~-~~l~~~l~~ 259 (260)
T cd05067 228 CPEELYELMRLCWKEKPEERPTF-EYLRSVLED 259 (260)
T ss_pred CCHHHHHHHHHHccCChhhCCCH-HHHHHHhhc
Confidence 45689999999999999999999 677777653
No 126
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=1.7e-35 Score=312.57 Aligned_cols=246 Identities=28% Similarity=0.406 Sum_probs=195.4
Q ss_pred eeeecCceEEEEEEECC-----eEEEEEEecCCCC-CCchhHHHHHHHHHhcCCCceeeEecccC-CceEEEEEecCCCC
Q 003384 471 KIGEGGYGSIYKGLLRH-----MQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGACP-EVWTLVYEYLPNGS 543 (824)
Q Consensus 471 ~LG~G~fG~Vykg~~~~-----~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~-~~~~LV~Ey~~ggs 543 (824)
.||+|+||.||+|.+.. ..||||.+..... ...+.+.+|+.++++++||||+++++.+. ...++||||+++|+
T Consensus 2 ~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~v~e~~~~~~ 81 (257)
T cd05040 2 KLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLTHPLMMVTELAPLGS 81 (257)
T ss_pred cCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcCCeEEEEEEecCCCc
Confidence 58999999999998742 3699999887655 34567899999999999999999999874 46789999999999
Q ss_pred hhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccccCCCc
Q 003384 544 LEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNT 623 (824)
Q Consensus 544 L~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~~~~~ 623 (824)
|.+.+..... ..+++.....++.|++.||.|||. ++++||||||+|||++.++.+||+|||++..+........
T Consensus 82 L~~~l~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~-- 155 (257)
T cd05040 82 LLDRLRKDAL-GHFLISTLCDYAVQIANGMRYLES---KRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYV-- 155 (257)
T ss_pred HHHHHHhccc-ccCcHHHHHHHHHHHHHHHHHHHh---CCccccccCcccEEEecCCEEEecccccccccccccccee--
Confidence 9999864432 568999999999999999999999 8999999999999999999999999999987654321110
Q ss_pred cccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHh-CCCCCCCchHHHHHHhhhccccccCCCCCCCChhhH
Q 003384 624 TLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQA 702 (824)
Q Consensus 624 ~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELlt-G~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~ 702 (824)
......++..|+|||++.+..++.++|||||||++|+|+| |++||............... ......+...+
T Consensus 156 ---~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 227 (257)
T cd05040 156 ---MEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKE-----GERLERPEACP 227 (257)
T ss_pred ---cccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhc-----CCcCCCCccCC
Confidence 0123457889999999998899999999999999999999 99999654333211111110 11111233446
Q ss_pred HHHHHHHHHHhhhccCCCCChHHHHHHHH
Q 003384 703 EQLANLAMRCCEMSRKSRPELGKDVWRVL 731 (824)
Q Consensus 703 ~~l~~Li~~Cl~~~P~~RPt~~~~v~~~L 731 (824)
..+.+++.+||+.+|.+||++ .++++.|
T Consensus 228 ~~~~~li~~~l~~~p~~Rps~-~~~~~~l 255 (257)
T cd05040 228 QDIYNVMLQCWAHNPADRPTF-AALREFL 255 (257)
T ss_pred HHHHHHHHHHCCCCcccCCCH-HHHHHHh
Confidence 789999999999999999999 5665554
No 127
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=1.3e-35 Score=318.19 Aligned_cols=253 Identities=23% Similarity=0.399 Sum_probs=199.1
Q ss_pred CCCCccceeeecCceEEEEEEEC--Ce----EEEEEEecCCCCC-CchhHHHHHHHHHhcCCCceeeEecccC-CceEEE
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLLR--HM----QVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACP-EVWTLV 535 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~~--~~----~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIv~L~g~~~-~~~~LV 535 (824)
.+|...++||+|+||.||+|.+. +. .||+|++...... ....+.+|+.++..++||||++++|+|. ...+++
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~l~ 86 (279)
T cd05109 7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTSTVQLV 86 (279)
T ss_pred hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCCCcEEE
Confidence 36788889999999999999863 32 5899998754322 2346889999999999999999999884 457899
Q ss_pred EEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccc
Q 003384 536 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQ 615 (824)
Q Consensus 536 ~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~ 615 (824)
|||+++|+|.+++... ...+++..++.++.|++.||.|||+ ++|+||||||+|||++.++.+||+|||+++.+..
T Consensus 87 ~~~~~~g~l~~~l~~~--~~~~~~~~~~~~~~qi~~~L~~lH~---~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~ 161 (279)
T cd05109 87 TQLMPYGCLLDYVREN--KDRIGSQDLLNWCVQIAKGMSYLEE---VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDI 161 (279)
T ss_pred EEcCCCCCHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccccceEEEcCCCcEEECCCCceeeccc
Confidence 9999999999998532 3468999999999999999999999 8999999999999999999999999999987643
Q ss_pred ccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHh-CCCCCCCchHHH--HHHhhhccccccCC
Q 003384 616 NEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQ--YALDTGKLKNLLDP 692 (824)
Q Consensus 616 ~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELlt-G~~Pf~~~~~~~--~~~~~~~~~~~ld~ 692 (824)
..... ......+++.|+|||.+.+..++.++|||||||++|||+| |.+||....... ..+..+.
T Consensus 162 ~~~~~------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~------- 228 (279)
T cd05109 162 DETEY------HADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGE------- 228 (279)
T ss_pred cccee------ecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCC-------
Confidence 22110 0122345788999999998899999999999999999998 999997543221 1111110
Q ss_pred CCCCCChhhHHHHHHHHHHHhhhccCCCCChHHHHHHHHHHHHh
Q 003384 693 LAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRA 736 (824)
Q Consensus 693 ~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le~l~~ 736 (824)
....+...+..+.+++.+||+.+|..||++ .++++.|+.+..
T Consensus 229 -~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~-~~l~~~l~~~~~ 270 (279)
T cd05109 229 -RLPQPPICTIDVYMIMVKCWMIDSECRPRF-RELVDEFSRMAR 270 (279)
T ss_pred -cCCCCccCCHHHHHHHHHHcCCChhhCcCH-HHHHHHHHHhhc
Confidence 111123456789999999999999999999 566677766543
No 128
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=7e-36 Score=342.41 Aligned_cols=249 Identities=22% Similarity=0.367 Sum_probs=188.4
Q ss_pred hcCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCCchhHHHHHHHHHhcCCCceeeEecccC--------C-
Q 003384 462 ATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--------E- 530 (824)
Q Consensus 462 ~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--------~- 530 (824)
...+|...+.||+|+||.||+|... +..||||++... .....+|+.+|+.++|||||++++++. .
T Consensus 64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~----~~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~ 139 (440)
T PTZ00036 64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQD----PQYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKN 139 (440)
T ss_pred cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecC----cchHHHHHHHHHhcCCCCCcceeeeEeecccccCCCc
Confidence 3457999999999999999999875 578999988543 234568999999999999999987651 1
Q ss_pred -ceEEEEEecCCCChhhhhhc-cCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCC-cceeecc
Q 003384 531 -VWTLVYEYLPNGSLEDRLSC-KDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANF-VSKLSDF 607 (824)
Q Consensus 531 -~~~LV~Ey~~ggsL~~~L~~-~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~-~vKL~DF 607 (824)
..++||||+++ +|.+++.. ......+++..+..++.||+.||.|||+ ++||||||||+||||+.++ .+||+||
T Consensus 140 ~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~---~~IiHrDLKp~NILl~~~~~~vkL~DF 215 (440)
T PTZ00036 140 IFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHS---KFICHRDLKPQNLLIDPNTHTLKLCDF 215 (440)
T ss_pred eEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCcCHHHEEEcCCCCceeeecc
Confidence 35689999975 67666532 2344578999999999999999999999 8999999999999999664 7999999
Q ss_pred ccccccccccccCCCccccccCCCCCCcccCChhhhccC-CCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhc-
Q 003384 608 GISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGK- 685 (824)
Q Consensus 608 Gla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~- 685 (824)
|+|+.+..... .....||+.|+|||++.+. .|+.++|||||||+||||+||.+||..............
T Consensus 216 Gla~~~~~~~~---------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~ 286 (440)
T PTZ00036 216 GSAKNLLAGQR---------SVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQV 286 (440)
T ss_pred ccchhccCCCC---------cccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH
Confidence 99986543221 1234589999999998764 699999999999999999999999976543322111100
Q ss_pred ---------------cccc-cCC-----CCCCCChhhHHHHHHHHHHHhhhccCCCCChHHHH
Q 003384 686 ---------------LKNL-LDP-----LAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDV 727 (824)
Q Consensus 686 ---------------~~~~-ld~-----~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v 727 (824)
+..+ +.. +...+|...+.++.+|+.+||..+|.+||++.+.+
T Consensus 287 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l 349 (440)
T PTZ00036 287 LGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEAL 349 (440)
T ss_pred hCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHh
Confidence 0000 000 00112333456899999999999999999995433
No 129
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=1.5e-35 Score=314.66 Aligned_cols=255 Identities=27% Similarity=0.416 Sum_probs=200.7
Q ss_pred CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCC---chhHHHHHHHHHhcCCCceeeEecccC--CceEEEEE
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG---PSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYE 537 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~---~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~E 537 (824)
+|...+.||.|+||.||+|... +..||||.+....... ...+.+|+.+++.++||||+++++++. +..++|||
T Consensus 3 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e 82 (267)
T cd08229 3 NFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLE 82 (267)
T ss_pred hhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEEE
Confidence 5777888999999999999864 6889999876533222 346889999999999999999999873 46889999
Q ss_pred ecCCCChhhhhhcc-CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccc
Q 003384 538 YLPNGSLEDRLSCK-DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQN 616 (824)
Q Consensus 538 y~~ggsL~~~L~~~-~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~ 616 (824)
|+++++|.+++... .....+++..++.++.+++.||.|||. ++++|+||||+||+++.++.++|+|||++..+...
T Consensus 83 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~ 159 (267)
T cd08229 83 LADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSK 159 (267)
T ss_pred ecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEECcchhhhccccC
Confidence 99999999988542 234568999999999999999999999 89999999999999999999999999998765432
Q ss_pred cccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCCC
Q 003384 617 EISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGD 696 (824)
Q Consensus 617 ~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~ 696 (824)
... .....|+..|+|||++.+..++.++||||||+++|+|++|..||............ .+.....+ ..
T Consensus 160 ~~~--------~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~-~~~~~~~~--~~ 228 (267)
T cd08229 160 TTA--------AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCK-KIEQCDYP--PL 228 (267)
T ss_pred Ccc--------cccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhh-hhhcCCCC--CC
Confidence 211 12245899999999998888999999999999999999999999643221111111 11111111 01
Q ss_pred CChhhHHHHHHHHHHHhhhccCCCCChHHHHHHHHHHH
Q 003384 697 WPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM 734 (824)
Q Consensus 697 ~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le~l 734 (824)
.+...+..+.+++.+||..+|.+||++ ..|.+.+..+
T Consensus 229 ~~~~~~~~~~~li~~~l~~~p~~Rpt~-~~i~~~~~~~ 265 (267)
T cd08229 229 PSDHYSEELRQLVNMCINPDPEKRPDI-TYVYDVAKRM 265 (267)
T ss_pred CcccccHHHHHHHHHhcCCCcccCCCH-HHHHHHHhhh
Confidence 122356789999999999999999999 7787877765
No 130
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.5e-35 Score=327.42 Aligned_cols=196 Identities=27% Similarity=0.412 Sum_probs=167.8
Q ss_pred CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC-CCchhHHHHHHHHHhcCCCceeeEeccc--CCceEEEEEe
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEY 538 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l~HpnIv~L~g~~--~~~~~LV~Ey 538 (824)
++|+..++||.|+||.||++... +..+|+|++..... .....+.+|+++++.++||||++++++| .+..++||||
T Consensus 5 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 84 (333)
T cd06650 5 DDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 84 (333)
T ss_pred hhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEec
Confidence 57899999999999999999886 57799998875422 1234688999999999999999999988 3468899999
Q ss_pred cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccc
Q 003384 539 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEI 618 (824)
Q Consensus 539 ~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~ 618 (824)
+++|+|.+++.. ...+++.....++.+++.||.|||+. .+|+||||||+|||++.++.+||+|||++..+....
T Consensus 85 ~~~~~L~~~l~~---~~~~~~~~~~~~~~~l~~~l~~lH~~--~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~- 158 (333)
T cd06650 85 MDGGSLDQVLKK---AGRIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM- 158 (333)
T ss_pred CCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhc--CCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhhc-
Confidence 999999999853 34588899999999999999999972 369999999999999999999999999987553221
Q ss_pred cCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCc
Q 003384 619 SSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGIT 674 (824)
Q Consensus 619 ~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~ 674 (824)
.....||..|+|||++.+..++.++|||||||++|+|++|+.||...
T Consensus 159 ---------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~ 205 (333)
T cd06650 159 ---------ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPP 205 (333)
T ss_pred ---------cccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc
Confidence 12345899999999999888999999999999999999999999754
No 131
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=1.7e-35 Score=317.01 Aligned_cols=257 Identities=23% Similarity=0.342 Sum_probs=203.3
Q ss_pred cCCCCccceeeecCceEEEEEEECC------eEEEEEEecCCCC-CCchhHHHHHHHHHhcCCCceeeEecccC---Cce
Q 003384 463 THNFDPSLKIGEGGYGSIYKGLLRH------MQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGACP---EVW 532 (824)
Q Consensus 463 ~~~f~~~~~LG~G~fG~Vykg~~~~------~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~---~~~ 532 (824)
..+|.....||+|+||.||+|.+.. ..|++|++..... .....+.+|+.+++.++||||+++++++. ...
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 84 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPP 84 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCC
Confidence 4578888999999999999998754 6799998864322 22356889999999999999999999873 457
Q ss_pred EEEEEecCCCChhhhhhccCCC-----CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecc
Q 003384 533 TLVYEYLPNGSLEDRLSCKDNS-----PPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF 607 (824)
Q Consensus 533 ~LV~Ey~~ggsL~~~L~~~~~~-----~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DF 607 (824)
+++++|+++|+|.+++...... ..+++..++.++.+++.||.|||+ ++++||||||+|||++.++.+||+||
T Consensus 85 ~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~---~~i~H~di~p~nil~~~~~~~kl~d~ 161 (280)
T cd05043 85 FVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHK---RGVIHKDIAARNCVIDEELQVKITDN 161 (280)
T ss_pred EEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccCHhhEEEcCCCcEEECCC
Confidence 8999999999999998643222 568999999999999999999999 89999999999999999999999999
Q ss_pred ccccccccccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHh-CCCCCCCchHHHHHHhhhcc
Q 003384 608 GISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKL 686 (824)
Q Consensus 608 Gla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELlt-G~~Pf~~~~~~~~~~~~~~~ 686 (824)
|+++.+........ .....++..|+|||++.+..++.++|||||||++||+++ |++||..............
T Consensus 162 g~~~~~~~~~~~~~------~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~- 234 (280)
T cd05043 162 ALSRDLFPMDYHCL------GDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKD- 234 (280)
T ss_pred CCcccccCCceEEe------CCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHHc-
Confidence 99986543321110 122346788999999988889999999999999999999 9999976543322111110
Q ss_pred ccccCCCCCCCChhhHHHHHHHHHHHhhhccCCCCChHHHHHHHHHHHH
Q 003384 687 KNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMR 735 (824)
Q Consensus 687 ~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le~l~ 735 (824)
......+...+..+.+++.+||..+|.+||++ .++...|..+.
T Consensus 235 -----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~-~~~~~~l~~~~ 277 (280)
T cd05043 235 -----GYRLAQPINCPDELFAVMACCWALDPEERPSF-SQLVQCLTDFH 277 (280)
T ss_pred -----CCCCCCCCcCCHHHHHHHHHHcCCChhhCCCH-HHHHHHHHHHH
Confidence 01111233446789999999999999999999 77888887764
No 132
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.3e-35 Score=323.33 Aligned_cols=257 Identities=25% Similarity=0.414 Sum_probs=202.9
Q ss_pred CCCCccceeeecCceEEEEEEECC---------eEEEEEEecCCC-CCCchhHHHHHHHHHhc-CCCceeeEecccC--C
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLLRH---------MQVAIKMLHPHS-LQGPSEFQQEIDILSKI-RHPNLVTLVGACP--E 530 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~~~---------~~VAvK~l~~~~-~~~~~~f~~Ei~iL~~l-~HpnIv~L~g~~~--~ 530 (824)
.+|.+.+.||+|+||.||++...+ ..+|+|.+.... ......+..|+.+++.+ +||||++++++|. +
T Consensus 18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~ 97 (307)
T cd05098 18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG 97 (307)
T ss_pred HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCC
Confidence 468889999999999999997532 469999987542 22234688899999999 7999999999884 4
Q ss_pred ceEEEEEecCCCChhhhhhccCC-------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEec
Q 003384 531 VWTLVYEYLPNGSLEDRLSCKDN-------------SPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLD 597 (824)
Q Consensus 531 ~~~LV~Ey~~ggsL~~~L~~~~~-------------~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld 597 (824)
..++||||+++|+|.+++..... ...+++..++.++.+++.||.|||+ +|++||||||+|||++
T Consensus 98 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~---~gi~H~dlkp~Nill~ 174 (307)
T cd05098 98 PLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVLVT 174 (307)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHH---CCcccccccHHheEEc
Confidence 68899999999999999964321 2358899999999999999999999 8999999999999999
Q ss_pred CCCcceeeccccccccccccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHh-CCCCCCCchH
Q 003384 598 ANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKE 676 (824)
Q Consensus 598 ~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELlt-G~~Pf~~~~~ 676 (824)
.++.+||+|||++........... .....+++.|+|||++.+..++.++|||||||++|+|++ |.+||.....
T Consensus 175 ~~~~~kL~dfg~a~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~ 248 (307)
T cd05098 175 EDNVMKIADFGLARDIHHIDYYKK------TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV 248 (307)
T ss_pred CCCcEEECCCcccccccccchhhc------cccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCH
Confidence 999999999999876543221110 012235678999999998899999999999999999998 8899975543
Q ss_pred HHH--HHhhhccccccCCCCCCCChhhHHHHHHHHHHHhhhccCCCCChHHHHHHHHHHHHhhC
Q 003384 677 VQY--ALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRASC 738 (824)
Q Consensus 677 ~~~--~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le~l~~~~ 738 (824)
... .+..+ .....+...+..+.+|+.+||..+|.+||++ .++++.|+.+....
T Consensus 249 ~~~~~~~~~~--------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~-~evl~~l~~~~~~~ 303 (307)
T cd05098 249 EELFKLLKEG--------HRMDKPSNCTNELYMMMRDCWHAVPSQRPTF-KQLVEDLDRILALT 303 (307)
T ss_pred HHHHHHHHcC--------CCCCCCCcCCHHHHHHHHHHcccChhhCcCH-HHHHHHHHHHHHHh
Confidence 221 11111 1112334456789999999999999999999 77888888876643
No 133
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=7.4e-36 Score=328.29 Aligned_cols=239 Identities=21% Similarity=0.316 Sum_probs=190.5
Q ss_pred CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCC---CCCchhHHHHHHHHHhcC-CCceeeEecccC--CceEEEE
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS---LQGPSEFQQEIDILSKIR-HPNLVTLVGACP--EVWTLVY 536 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~---~~~~~~f~~Ei~iL~~l~-HpnIv~L~g~~~--~~~~LV~ 536 (824)
+|+..+.||+|+||.||+|... +..||||++.... ......+..|..++..+. ||+|+++++++. +..++||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 3677889999999999999875 5789999987532 122345778999998886 567778888773 4689999
Q ss_pred EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccc
Q 003384 537 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQN 616 (824)
Q Consensus 537 Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~ 616 (824)
||++||+|.+++.. ...+++..+..++.|++.||.|||+ +||+||||||+|||++.++.+||+|||+++.....
T Consensus 81 Ey~~~g~L~~~i~~---~~~l~~~~~~~i~~qi~~al~~lH~---~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~ 154 (323)
T cd05615 81 EYVNGGDLMYHIQQ---VGKFKEPQAVFYAAEISVGLFFLHR---RGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVD 154 (323)
T ss_pred cCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEEeccccccccCCC
Confidence 99999999998843 3468999999999999999999999 89999999999999999999999999998753322
Q ss_pred cccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCCC
Q 003384 617 EISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGD 696 (824)
Q Consensus 617 ~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~ 696 (824)
... .....||+.|+|||++.+..++.++|||||||++|+|+||++||............ .. ....
T Consensus 155 ~~~--------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i--~~-----~~~~ 219 (323)
T cd05615 155 GVT--------TRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSI--ME-----HNVS 219 (323)
T ss_pred Ccc--------ccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHH--Hh-----CCCC
Confidence 110 12345899999999999989999999999999999999999999765432211110 00 1112
Q ss_pred CChhhHHHHHHHHHHHhhhccCCCCChH
Q 003384 697 WPFVQAEQLANLAMRCCEMSRKSRPELG 724 (824)
Q Consensus 697 ~p~~~~~~l~~Li~~Cl~~~P~~RPt~~ 724 (824)
+|...+..+.+++.+||+.+|.+|++..
T Consensus 220 ~p~~~~~~~~~li~~~l~~~p~~R~~~~ 247 (323)
T cd05615 220 YPKSLSKEAVSICKGLMTKHPSKRLGCG 247 (323)
T ss_pred CCccCCHHHHHHHHHHcccCHhhCCCCC
Confidence 3445567899999999999999999863
No 134
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=1.5e-35 Score=312.03 Aligned_cols=243 Identities=26% Similarity=0.399 Sum_probs=196.7
Q ss_pred CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC--CCchhHHHHHHHHHhcCCCceeeEecccC--CceEEEEEe
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEY 538 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~--~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~Ey 538 (824)
+|...+.||+|+||.||+|... +..|++|.+..... .....+.+|+.+++.++||||+++++++. ...++||||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY 80 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence 4677788999999999999875 58899999865422 23456889999999999999999999884 468999999
Q ss_pred cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccc
Q 003384 539 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEI 618 (824)
Q Consensus 539 ~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~ 618 (824)
++|++|.+++... ....+++..++.++.+++.||.|||. +|++||||||+||+++.++.+||+|||+++.+.....
T Consensus 81 ~~~~~L~~~l~~~-~~~~~~~~~~~~i~~~l~~al~~lH~---~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~ 156 (256)
T cd08529 81 AENGDLHKLLKMQ-RGRPLPEDQVWRFFIQILLGLAHLHS---KKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTN 156 (256)
T ss_pred CCCCcHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcceEEEeCCCCEEEcccccceeccCccc
Confidence 9999999998643 24568999999999999999999999 8999999999999999999999999999886653321
Q ss_pred cCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCCCCC
Q 003384 619 SSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWP 698 (824)
Q Consensus 619 ~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p 698 (824)
. .....|++.|+|||++.+..++.++|||||||++|+|+||+.||........... ..... ....+
T Consensus 157 ~--------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~--~~~~~----~~~~~ 222 (256)
T cd08529 157 F--------ANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILK--IIRGV----FPPVS 222 (256)
T ss_pred h--------hhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHH--HHcCC----CCCCc
Confidence 1 1234588999999999999999999999999999999999999976653221111 11111 11222
Q ss_pred hhhHHHHHHHHHHHhhhccCCCCChHH
Q 003384 699 FVQAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 699 ~~~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
...+..+.+++.+||+.+|.+||++.+
T Consensus 223 ~~~~~~~~~~i~~~l~~~p~~Rp~~~~ 249 (256)
T cd08529 223 QMYSQQLAQLIDQCLTKDYRQRPDTFQ 249 (256)
T ss_pred cccCHHHHHHHHHHccCCcccCcCHHH
Confidence 345678999999999999999999944
No 135
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=1.5e-35 Score=315.22 Aligned_cols=254 Identities=26% Similarity=0.456 Sum_probs=198.8
Q ss_pred CCCCccceeeecCceEEEEEEEC--C---eEEEEEEecCCCC-CCchhHHHHHHHHHhcCCCceeeEecccC--CceEEE
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLLR--H---MQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLV 535 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~~--~---~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV 535 (824)
++|+..+.||+|+||.||+|... + ..+|+|.+..... .....+..|+.+++.++||||+++++++. +..++|
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (268)
T cd05063 5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMII 84 (268)
T ss_pred HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEE
Confidence 46788899999999999999874 2 3699998865422 22456889999999999999999999884 467899
Q ss_pred EEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccc
Q 003384 536 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQ 615 (824)
Q Consensus 536 ~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~ 615 (824)
|||+++++|.+++.. ....+++..+..++.+++.||.|||. .+++||||||+|||++.++.+||+|||++.....
T Consensus 85 ~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~ 159 (268)
T cd05063 85 TEYMENGALDKYLRD--HDGEFSSYQLVGMLRGIAAGMKYLSD---MNYVHRDLAARNILVNSNLECKVSDFGLSRVLED 159 (268)
T ss_pred EEcCCCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccchhhEEEcCCCcEEECCCccceeccc
Confidence 999999999999853 23568999999999999999999999 8999999999999999999999999999886543
Q ss_pred ccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHh-CCCCCCCchHHHHHHhhhccccccCCCC
Q 003384 616 NEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLA 694 (824)
Q Consensus 616 ~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELlt-G~~Pf~~~~~~~~~~~~~~~~~~ld~~~ 694 (824)
....... .....+++.|+|||++.+..++.++|||||||++|||+| |+.||............. ....
T Consensus 160 ~~~~~~~-----~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~------~~~~ 228 (268)
T cd05063 160 DPEGTYT-----TSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAIN------DGFR 228 (268)
T ss_pred cccccee-----ccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHh------cCCC
Confidence 2211100 112234568999999988889999999999999999998 999996443221111110 0111
Q ss_pred CCCChhhHHHHHHHHHHHhhhccCCCCChHHHHHHHHHHH
Q 003384 695 GDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM 734 (824)
Q Consensus 695 ~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le~l 734 (824)
...+...+..+.+++.+||+.+|.+||++ .++...|+.+
T Consensus 229 ~~~~~~~~~~~~~li~~c~~~~p~~Rp~~-~~i~~~l~~~ 267 (268)
T cd05063 229 LPAPMDCPSAVYQLMLQCWQQDRARRPRF-VDIVNLLDKL 267 (268)
T ss_pred CCCCCCCCHHHHHHHHHHcCCCcccCcCH-HHHHHHHHhh
Confidence 12233456789999999999999999999 7777777654
No 136
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=1.5e-35 Score=318.20 Aligned_cols=238 Identities=24% Similarity=0.330 Sum_probs=186.7
Q ss_pred eeecCceEEEEEEEC--CeEEEEEEecCCCCC---CchhHHHHHHHHHhcCCCceeeEecccC--CceEEEEEecCCCCh
Q 003384 472 IGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ---GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYLPNGSL 544 (824)
Q Consensus 472 LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~---~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~Ey~~ggsL 544 (824)
||+|+||.||++... +..||+|.+...... ....+..|++++++++||||+++++++. ...++||||++||+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 799999999999875 688999998643221 2234567999999999999999999884 468899999999999
Q ss_pred hhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccccCCCcc
Q 003384 545 EDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTT 624 (824)
Q Consensus 545 ~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~~~~~~ 624 (824)
.+++... ....+++..+..++.|++.||.|||+ ++|+||||||+|||++.++.+||+|||++........
T Consensus 81 ~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~------ 150 (277)
T cd05607 81 KYHIYNV-GERGLEMERVIHYSAQITCGILHLHS---MDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKT------ 150 (277)
T ss_pred HHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHH---CCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCce------
Confidence 9888533 23458899999999999999999999 8999999999999999999999999999876543211
Q ss_pred ccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHH--HHHHhhhccccccCCCCCCCChhhH
Q 003384 625 LCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEV--QYALDTGKLKNLLDPLAGDWPFVQA 702 (824)
Q Consensus 625 ~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~--~~~~~~~~~~~~ld~~~~~~p~~~~ 702 (824)
.....||..|+|||++.+..++.++|||||||++|+|++|++||...... ...+........+.. .....+
T Consensus 151 ---~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 223 (277)
T cd05607 151 ---ITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVKF----EHQNFT 223 (277)
T ss_pred ---eeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhcccccc----ccccCC
Confidence 12345899999999999888999999999999999999999999653221 111111111111110 112346
Q ss_pred HHHHHHHHHHhhhccCCCCChHHH
Q 003384 703 EQLANLAMRCCEMSRKSRPELGKD 726 (824)
Q Consensus 703 ~~l~~Li~~Cl~~~P~~RPt~~~~ 726 (824)
..+.+|+.+||+.+|.+||++.+.
T Consensus 224 ~~~~~li~~~L~~~P~~R~~~~~~ 247 (277)
T cd05607 224 EESKDICRLFLAKKPEDRLGSREK 247 (277)
T ss_pred HHHHHHHHHHhccCHhhCCCCccc
Confidence 689999999999999999998443
No 137
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=3.9e-35 Score=328.69 Aligned_cols=247 Identities=23% Similarity=0.306 Sum_probs=189.2
Q ss_pred CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC--CCchhHHHHHHHHHhcCCCceeeEecccCC-------ceE
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVGACPE-------VWT 533 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~--~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~~-------~~~ 533 (824)
+|++.+.||+|+||.||+|... +..||||.+..... .....+.+|+.+++.++||||+++++++.. ..+
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 4778899999999999999864 68899999864321 223568899999999999999999998732 578
Q ss_pred EEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccc
Q 003384 534 LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFL 613 (824)
Q Consensus 534 LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~ 613 (824)
+||||+. ++|.+.+. ....+++..+..++.|++.||.|||+ ++|+||||||+|||++.++.+||+|||+++..
T Consensus 81 lv~e~~~-~~l~~~~~---~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~ 153 (372)
T cd07853 81 VVTELMQ-SDLHKIIV---SPQPLSSDHVKVFLYQILRGLKYLHS---AGILHRDIKPGNLLVNSNCVLKICDFGLARVE 153 (372)
T ss_pred EEeeccc-cCHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChHHEEECCCCCEEeccccceeec
Confidence 9999996 57877773 34568999999999999999999999 89999999999999999999999999999865
Q ss_pred ccccccCCCccccccCCCCCCcccCChhhhccC-CCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhh--------
Q 003384 614 SQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTG-------- 684 (824)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~-------- 684 (824)
...... ......||+.|+|||++.+. .++.++|||||||++|||++|++||...+.........
T Consensus 154 ~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~ 226 (372)
T cd07853 154 EPDESK-------HMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSL 226 (372)
T ss_pred ccCccc-------cCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCH
Confidence 432211 11234689999999998774 57899999999999999999999997654322111000
Q ss_pred ---------cccccc-CCCC-------CCCChhhHHHHHHHHHHHhhhccCCCCChHH
Q 003384 685 ---------KLKNLL-DPLA-------GDWPFVQAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 685 ---------~~~~~l-d~~~-------~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
....+. .+.. .......+..+.+|+.+||+.+|.+||++.+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e 284 (372)
T cd07853 227 EAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAAD 284 (372)
T ss_pred HHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHH
Confidence 000000 0000 0111223567899999999999999999944
No 138
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=9.4e-36 Score=326.59 Aligned_cols=233 Identities=22% Similarity=0.287 Sum_probs=187.9
Q ss_pred ceeeecCceEEEEEEEC--CeEEEEEEecCCC---CCCchhHHHHHHHHHhc-CCCceeeEeccc--CCceEEEEEecCC
Q 003384 470 LKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS---LQGPSEFQQEIDILSKI-RHPNLVTLVGAC--PEVWTLVYEYLPN 541 (824)
Q Consensus 470 ~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~---~~~~~~f~~Ei~iL~~l-~HpnIv~L~g~~--~~~~~LV~Ey~~g 541 (824)
+.||+|+||.||+|.+. +..||||++.... ......+..|..++..+ +||||+++++++ .+..++||||++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999886 4689999987532 22344577899999888 699999999987 4568999999999
Q ss_pred CChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccccCC
Q 003384 542 GSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSN 621 (824)
Q Consensus 542 gsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~~~ 621 (824)
|+|.+++.. ...+++..+..++.|++.||.|||+ ++|+||||||+|||++.++.+||+|||+++........
T Consensus 81 ~~L~~~~~~---~~~l~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~-- 152 (318)
T cd05570 81 GDLMFHIQR---SGRFDEPRARFYAAEIVLGLQFLHE---RGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVT-- 152 (318)
T ss_pred CCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEccCCCHHHeEECCCCcEEecccCCCeecCcCCCc--
Confidence 999988843 3468999999999999999999999 89999999999999999999999999998743221110
Q ss_pred CccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCCCCChhh
Q 003384 622 NTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQ 701 (824)
Q Consensus 622 ~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~ 701 (824)
.....||+.|+|||++.+..++.++|||||||++|+|+||+.||............. ......|...
T Consensus 153 ------~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~-------~~~~~~~~~~ 219 (318)
T cd05570 153 ------TSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSIL-------EDEVRYPRWL 219 (318)
T ss_pred ------ccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHH-------cCCCCCCCcC
Confidence 123458999999999999999999999999999999999999997654322211110 0011234445
Q ss_pred HHHHHHHHHHHhhhccCCCCCh
Q 003384 702 AEQLANLAMRCCEMSRKSRPEL 723 (824)
Q Consensus 702 ~~~l~~Li~~Cl~~~P~~RPt~ 723 (824)
+..+.+|+.+||+.+|.+||++
T Consensus 220 ~~~~~~li~~~l~~dP~~R~s~ 241 (318)
T cd05570 220 SKEAKSILKSFLTKNPEKRLGC 241 (318)
T ss_pred CHHHHHHHHHHccCCHHHcCCC
Confidence 6789999999999999999998
No 139
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=2e-35 Score=321.38 Aligned_cols=284 Identities=24% Similarity=0.428 Sum_probs=215.3
Q ss_pred CCCCccceeeecCceEEEEEEEC--C----eEEEEEEecCCCCCC-chhHHHHHHHHHhcCCCceeeEecccC-CceEEE
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLLR--H----MQVAIKMLHPHSLQG-PSEFQQEIDILSKIRHPNLVTLVGACP-EVWTLV 535 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~~--~----~~VAvK~l~~~~~~~-~~~f~~Ei~iL~~l~HpnIv~L~g~~~-~~~~LV 535 (824)
.+|...+.||+|+||.||+|.+. + ..||+|.+....... ...+.+|+.+++.++||||++++|+|. ...++|
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~v 86 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQLV 86 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCCCceee
Confidence 35777889999999999999863 3 257999886543221 236889999999999999999999884 456799
Q ss_pred EEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccc
Q 003384 536 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQ 615 (824)
Q Consensus 536 ~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~ 615 (824)
+||+++|+|.+++... ...+++..+..++.|++.||.|||+ ++|+||||||+|||++.++.+||+|||+++.+..
T Consensus 87 ~e~~~~g~l~~~~~~~--~~~~~~~~~~~~~~qi~~~L~~LH~---~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~ 161 (303)
T cd05110 87 TQLMPHGCLLDYVHEH--KDNIGSQLLLNWCVQIAKGMMYLEE---RRLVHRDLAARNVLVKSPNHVKITDFGLARLLEG 161 (303)
T ss_pred ehhcCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHhh---cCeeccccccceeeecCCCceEEccccccccccC
Confidence 9999999999998532 3458899999999999999999999 8999999999999999999999999999986643
Q ss_pred ccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHh-CCCCCCCchH--HHHHHhhhccccccCC
Q 003384 616 NEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKE--VQYALDTGKLKNLLDP 692 (824)
Q Consensus 616 ~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELlt-G~~Pf~~~~~--~~~~~~~~~~~~~ld~ 692 (824)
...... .....++..|+|||++.+..++.++|||||||++|||++ |..||..... ....+..+. .
T Consensus 162 ~~~~~~------~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~---~--- 229 (303)
T cd05110 162 DEKEYN------ADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGE---R--- 229 (303)
T ss_pred cccccc------cCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCC---C---
Confidence 221100 122346789999999998899999999999999999997 8999965432 111111111 0
Q ss_pred CCCCCChhhHHHHHHHHHHHhhhccCCCCChHHHHHHHHHHHHhhCCCCCCccCCCCCCCCCCCCCcccchhhhccC
Q 003384 693 LAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRASCGGSTSYRLGSEERCEPPPYFTCPIFQEVMQD 769 (824)
Q Consensus 693 ~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le~l~~~~~~~~~~~~~~e~~~~~P~~f~cPi~~evm~d 769 (824)
...+...+..+.+++.+||..+|.+||++ .++...|..+..... +............|.....|++++.|.+
T Consensus 230 --~~~~~~~~~~~~~li~~c~~~~p~~Rp~~-~~l~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (303)
T cd05110 230 --LPQPPICTIDVYMVMVKCWMIDADSRPKF-KELAAEFSRMARDPQ--RYLVIQGDDRMKLPSPNDSKFFQNLLDE 301 (303)
T ss_pred --CCCCCCCCHHHHHHHHHHcCCChhhCcCH-HHHHHHHHHHHhchh--hheeeccCCcCCCCCCchhhHHhccccc
Confidence 11122345689999999999999999999 667777777644321 1222233444566788888888887754
No 140
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=3.2e-35 Score=310.47 Aligned_cols=246 Identities=28% Similarity=0.479 Sum_probs=200.7
Q ss_pred CCCCccceeeecCceEEEEEEECCeEEEEEEecCCCCCCchhHHHHHHHHHhcCCCceeeEecccC--CceEEEEEecCC
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYLPN 541 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~~~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~Ey~~g 541 (824)
.+|.....||.|+||.||+|...+..||||.+..... ....+.+|+.+++.++||||+++++++. +..++||||+++
T Consensus 6 ~~~~~~~~ig~g~~g~v~~~~~~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~ 84 (256)
T cd05039 6 KELKLGATIGKGEFGDVMLGDYRGQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMAK 84 (256)
T ss_pred hhccceeeeecCCCceEEEEEecCcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecCC
Confidence 4678889999999999999999999999999976543 4567899999999999999999999874 568899999999
Q ss_pred CChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccccCC
Q 003384 542 GSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSN 621 (824)
Q Consensus 542 gsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~~~ 621 (824)
++|.+++.... ...+++..+..++.+++.||.|||. ++++||||||+|||++.++.+||+|||+++......
T Consensus 85 ~~L~~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lh~---~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~---- 156 (256)
T cd05039 85 GSLVDYLRSRG-RAVITLAQQLGFALDVCEGMEYLEE---KNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQ---- 156 (256)
T ss_pred CcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHh---CCccchhcccceEEEeCCCCEEEccccccccccccc----
Confidence 99999985432 2368999999999999999999999 899999999999999999999999999998663221
Q ss_pred CccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHh-CCCCCCCchHHHHHHhhhccccccCCCCCCCChh
Q 003384 622 NTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWPFV 700 (824)
Q Consensus 622 ~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELlt-G~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~ 700 (824)
....++..|+|||++.++.++.++||||||+++|+|++ |+.||.............. . .....+..
T Consensus 157 -------~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~--~----~~~~~~~~ 223 (256)
T cd05039 157 -------DSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEK--G----YRMEAPEG 223 (256)
T ss_pred -------ccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhc--C----CCCCCccC
Confidence 11235678999999988889999999999999999997 9999975543221111110 0 01112334
Q ss_pred hHHHHHHHHHHHhhhccCCCCChHHHHHHHHH
Q 003384 701 QAEQLANLAMRCCEMSRKSRPELGKDVWRVLE 732 (824)
Q Consensus 701 ~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le 732 (824)
.+..+.+++.+||..+|.+||++ .++...|+
T Consensus 224 ~~~~~~~li~~~l~~~p~~Rp~~-~~l~~~l~ 254 (256)
T cd05039 224 CPPEVYKVMKDCWELDPAKRPTF-KQLREQLA 254 (256)
T ss_pred CCHHHHHHHHHHhccChhhCcCH-HHHHHHHh
Confidence 46789999999999999999999 66766664
No 141
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=3.5e-36 Score=331.45 Aligned_cols=234 Identities=24% Similarity=0.335 Sum_probs=186.2
Q ss_pred ceeeecCceEEEEEEEC--CeEEEEEEecCCCC---CCchhHHHHHHHHHhc-CCCceeeEecccC--CceEEEEEecCC
Q 003384 470 LKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEIDILSKI-RHPNLVTLVGACP--EVWTLVYEYLPN 541 (824)
Q Consensus 470 ~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~---~~~~~f~~Ei~iL~~l-~HpnIv~L~g~~~--~~~~LV~Ey~~g 541 (824)
+.||+|+||.||+|... +..||+|++..... .....+..|+.++.++ +||||+++++++. ...++||||++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 36999999999999875 47899999975422 2234578999999888 6999999999874 468899999999
Q ss_pred CChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccccCC
Q 003384 542 GSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSN 621 (824)
Q Consensus 542 gsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~~~ 621 (824)
|+|..++.. ...+++..+..++.|++.||.|||+ ++|+||||||+|||++.++.+||+|||+++........
T Consensus 81 ~~L~~~~~~---~~~l~~~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~-- 152 (327)
T cd05617 81 GDLMFHMQR---QRKLPEEHARFYAAEICIALNFLHE---RGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDT-- 152 (327)
T ss_pred CcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEEeCCCCEEEeccccceeccCCCCc--
Confidence 999988842 3468999999999999999999999 89999999999999999999999999998743221110
Q ss_pred CccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchH------HHHHHhhhccccccCCCCC
Q 003384 622 NTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKE------VQYALDTGKLKNLLDPLAG 695 (824)
Q Consensus 622 ~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~------~~~~~~~~~~~~~ld~~~~ 695 (824)
.....||+.|+|||++.+..++.++|||||||+||+|+||++||..... ....... .. ....
T Consensus 153 ------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~-----~~-~~~~ 220 (327)
T cd05617 153 ------TSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQV-----IL-EKPI 220 (327)
T ss_pred ------eecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHH-----HH-hCCC
Confidence 1234689999999999999999999999999999999999999953210 0010000 00 1112
Q ss_pred CCChhhHHHHHHHHHHHhhhccCCCCCh
Q 003384 696 DWPFVQAEQLANLAMRCCEMSRKSRPEL 723 (824)
Q Consensus 696 ~~p~~~~~~l~~Li~~Cl~~~P~~RPt~ 723 (824)
..|...+..+.+++.+||+.+|.+||+.
T Consensus 221 ~~p~~~~~~~~~li~~~L~~dP~~R~~~ 248 (327)
T cd05617 221 RIPRFLSVKASHVLKGFLNKDPKERLGC 248 (327)
T ss_pred CCCCCCCHHHHHHHHHHhccCHHHcCCC
Confidence 2344556789999999999999999985
No 142
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=1.5e-35 Score=317.42 Aligned_cols=253 Identities=23% Similarity=0.364 Sum_probs=196.3
Q ss_pred cCCCCccceeeecCceEEEEEEECC-------eEEEEEEecCCCCC-CchhHHHHHHHHHhcCCCceeeEecccC--Cce
Q 003384 463 THNFDPSLKIGEGGYGSIYKGLLRH-------MQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACP--EVW 532 (824)
Q Consensus 463 ~~~f~~~~~LG~G~fG~Vykg~~~~-------~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~ 532 (824)
+++|...+.||+|+||.||+|.+.+ ..||+|.+...... ....|.+|+.+++.++||||+++++++. +..
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 84 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPR 84 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCc
Confidence 4578888999999999999998753 57899987644322 2346889999999999999999999874 457
Q ss_pred EEEEEecCCCChhhhhhccCC----CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCC---cceee
Q 003384 533 TLVYEYLPNGSLEDRLSCKDN----SPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANF---VSKLS 605 (824)
Q Consensus 533 ~LV~Ey~~ggsL~~~L~~~~~----~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~---~vKL~ 605 (824)
++||||++||+|.+++..... ...+++..++.++.+|+.||.|||. ++++||||||+|||++.++ .+||+
T Consensus 85 ~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~nil~~~~~~~~~~kl~ 161 (277)
T cd05036 85 FILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEE---NHFIHRDIAARNCLLTCKGPGRVAKIA 161 (277)
T ss_pred EEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccchheEEEeccCCCcceEec
Confidence 899999999999999864421 2358999999999999999999999 7899999999999998654 68999
Q ss_pred ccccccccccccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHh-CCCCCCCchHHHHHHhhh
Q 003384 606 DFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTG 684 (824)
Q Consensus 606 DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELlt-G~~Pf~~~~~~~~~~~~~ 684 (824)
|||+++.+........ .....++..|+|||++.+..++.++|||||||++|+|++ |+.||............
T Consensus 162 dfg~~~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~- 234 (277)
T cd05036 162 DFGMARDIYRASYYRK------GGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFV- 234 (277)
T ss_pred cCccccccCCccceec------CCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH-
Confidence 9999987633221110 112234678999999998999999999999999999997 99999754322111000
Q ss_pred ccccccCCCCCCCChhhHHHHHHHHHHHhhhccCCCCChHHHHHHHH
Q 003384 685 KLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVL 731 (824)
Q Consensus 685 ~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~L 731 (824)
.......+|...+..+.+++.+|++.+|.+||++ .+|++.|
T Consensus 235 -----~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~-~~vl~~l 275 (277)
T cd05036 235 -----TGGGRLDPPKGCPGPVYRIMTDCWQHTPEDRPNF-ATILERI 275 (277)
T ss_pred -----HcCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCH-HHHHHHh
Confidence 0011122344556789999999999999999999 5565554
No 143
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=3.9e-36 Score=330.50 Aligned_cols=240 Identities=24% Similarity=0.290 Sum_probs=186.8
Q ss_pred ceeeecCceEEEEEEEC--CeEEEEEEecCCCC---CCchhHHHHHH-HHHhcCCCceeeEeccc--CCceEEEEEecCC
Q 003384 470 LKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEID-ILSKIRHPNLVTLVGAC--PEVWTLVYEYLPN 541 (824)
Q Consensus 470 ~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~---~~~~~f~~Ei~-iL~~l~HpnIv~L~g~~--~~~~~LV~Ey~~g 541 (824)
+.||+|+||.||+|... +..||||++..... .....+..|.. +++.++||||+++++++ .+..++||||++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 35999999999999875 57899999865321 12234556655 46779999999999987 4568999999999
Q ss_pred CChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccccCC
Q 003384 542 GSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSN 621 (824)
Q Consensus 542 gsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~~~ 621 (824)
|+|..++. ....+++..+..++.||+.||.|||+ +||+||||||+|||++.++.+||+|||+++.......
T Consensus 81 ~~L~~~l~---~~~~~~~~~~~~~~~qi~~al~~lH~---~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~--- 151 (325)
T cd05604 81 GELFFHLQ---RERSFPEPRARFYAAEIASALGYLHS---INIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSD--- 151 (325)
T ss_pred CCHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCC---
Confidence 99998884 34568999999999999999999999 8999999999999999999999999999874322111
Q ss_pred CccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCCCCChhh
Q 003384 622 NTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQ 701 (824)
Q Consensus 622 ~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~ 701 (824)
......||+.|+|||++.+..++.++|||||||++|+|++|++||............ .... ...+...
T Consensus 152 -----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~--~~~~-----~~~~~~~ 219 (325)
T cd05604 152 -----TTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNI--LHKP-----LVLRPGA 219 (325)
T ss_pred -----CcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHH--HcCC-----ccCCCCC
Confidence 012346999999999999999999999999999999999999999765432211111 0000 1112234
Q ss_pred HHHHHHHHHHHhhhccCCCCChHHHHHHH
Q 003384 702 AEQLANLAMRCCEMSRKSRPELGKDVWRV 730 (824)
Q Consensus 702 ~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~ 730 (824)
+..+.+++.+|++.+|.+||++...+.++
T Consensus 220 ~~~~~~ll~~ll~~~p~~R~~~~~~~~~i 248 (325)
T cd05604 220 SLTAWSILEELLEKDRQRRLGAKEDFLEI 248 (325)
T ss_pred CHHHHHHHHHHhccCHHhcCCCCCCHHHH
Confidence 56889999999999999999985444333
No 144
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=2.3e-35 Score=354.02 Aligned_cols=266 Identities=23% Similarity=0.323 Sum_probs=204.6
Q ss_pred CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCC---chhHHHHHHHHHhcCCCceeeEecccC--CceEEEE
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG---PSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVY 536 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~---~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~ 536 (824)
++|...++||+|+||.||+|.+. +..||||++....... ...|.+|+.+++.++||||+++++++. +..++||
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 46888999999999999999875 5789999987543222 346889999999999999999999884 4688999
Q ss_pred EecCCCChhhhhhccC--------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccc
Q 003384 537 EYLPNGSLEDRLSCKD--------NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFG 608 (824)
Q Consensus 537 Ey~~ggsL~~~L~~~~--------~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFG 608 (824)
||++||+|.+++.... ....+++..++.++.+++.||.|||+ +||+||||||+|||++.++.+||+|||
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs---~GIIHRDLKPeNILLd~dg~vKLiDFG 158 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHS---KGVLHRDLKPDNILLGLFGEVVILDWG 158 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHH---CCccccCCchheEEEcCCCCEEEEecC
Confidence 9999999999885321 12346677889999999999999999 899999999999999999999999999
Q ss_pred cccccccccccCC----------CccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHH
Q 003384 609 ISRFLSQNEISSN----------NTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQ 678 (824)
Q Consensus 609 la~~~~~~~~~~~----------~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~ 678 (824)
+++.......... ...........||+.|+|||++.+..++.++|||||||++|||+||++||.......
T Consensus 159 LAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~k 238 (932)
T PRK13184 159 AAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRK 238 (932)
T ss_pred cceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhh
Confidence 9987622110000 000001123569999999999999999999999999999999999999996543221
Q ss_pred HHHhhhccccccCCCCCCCChhhHHHHHHHHHHHhhhccCCCCChHHHHHHHHHHHHh
Q 003384 679 YALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRA 736 (824)
Q Consensus 679 ~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le~l~~ 736 (824)
.... . ....+.........+..+.+++.+|++.+|.+||+..+++.+.|+....
T Consensus 239 i~~~-~---~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq 292 (932)
T PRK13184 239 ISYR-D---VILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQ 292 (932)
T ss_pred hhhh-h---hccChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 1111 1 1111111111123456789999999999999999888888888877654
No 145
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=6.7e-36 Score=319.72 Aligned_cols=250 Identities=26% Similarity=0.299 Sum_probs=199.7
Q ss_pred CCCccceeeecCceEEEEEEECC--eEEEEEEecCCCCCCc---hhHHHHHHHHHhcCCCceeeEecccC--CceEEEEE
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGP---SEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYE 537 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~~--~~VAvK~l~~~~~~~~---~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~E 537 (824)
.|...+.||.|.-|+||.+..++ ..+|+|++.+...... .+.+.|.+||+.++||.++.||+.|+ +..|||||
T Consensus 78 ~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~me 157 (459)
T KOG0610|consen 78 HFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVME 157 (459)
T ss_pred HHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEEe
Confidence 46777889999999999999986 6799999987654433 35677999999999999999999994 56889999
Q ss_pred ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccccc
Q 003384 538 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNE 617 (824)
Q Consensus 538 y~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~ 617 (824)
||+||+|..+++ ++....|+...+..++.+++.||.|||. .|||+|||||+||||-++|++.|+||.|+.......
T Consensus 158 yCpGGdL~~Lrq-kQp~~~fse~~aRFYaAEvl~ALEYLHm---lGivYRDLKPENILvredGHIMLsDFDLS~~~~~~P 233 (459)
T KOG0610|consen 158 YCPGGDLHSLRQ-KQPGKRFSESAARFYAAEVLLALEYLHM---LGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSP 233 (459)
T ss_pred cCCCccHHHHHh-hCCCCccchhhHHHHHHHHHHHHHHHHh---hceeeccCCcceeEEecCCcEEeeeccccccCCCCC
Confidence 999999998875 4456779999999999999999999999 899999999999999999999999999986432100
Q ss_pred cc-----------------------------C-C------------------CccccccCCCCCCcccCChhhhccCCCC
Q 003384 618 IS-----------------------------S-N------------------NTTLCCRTDPKGTFAYMDPEFLASGELT 649 (824)
Q Consensus 618 ~~-----------------------------~-~------------------~~~~~~~~~~~GT~~Y~APE~l~~~~~t 649 (824)
+. . . ..+.......+||-.|+|||++.+.+++
T Consensus 234 t~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHg 313 (459)
T KOG0610|consen 234 TLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHG 313 (459)
T ss_pred eeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCC
Confidence 00 0 0 0001122356899999999999999999
Q ss_pred cchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCCCCChhhHHHHHHHHHHHhhhccCCCCCh
Q 003384 650 PKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPEL 723 (824)
Q Consensus 650 ~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~ 723 (824)
.++|||+|||+||||+.|..||.+.+.-....+. +.+- ......| ..+..+.+||.+.|.+||.+|...
T Consensus 314 sAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NI--v~~~--l~Fp~~~-~vs~~akDLIr~LLvKdP~kRlg~ 382 (459)
T KOG0610|consen 314 SAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNI--VGQP--LKFPEEP-EVSSAAKDLIRKLLVKDPSKRLGS 382 (459)
T ss_pred chhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHH--hcCC--CcCCCCC-cchhHHHHHHHHHhccChhhhhcc
Confidence 9999999999999999999999877643332221 1110 1111222 456789999999999999999985
No 146
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=8.3e-36 Score=334.33 Aligned_cols=245 Identities=25% Similarity=0.287 Sum_probs=191.4
Q ss_pred cCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCC---CCCchhHHHHHHHHHhcCCCceeeEecccC--CceEEE
Q 003384 463 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS---LQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLV 535 (824)
Q Consensus 463 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~---~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV 535 (824)
..+|...+.||+|+||.||++... +..||+|++.... ......+.+|+.+++.++||||+++++++. ...++|
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~lv 121 (370)
T cd05596 42 AEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYMV 121 (370)
T ss_pred HHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEE
Confidence 347888999999999999999875 5789999986432 122345788999999999999999999884 458899
Q ss_pred EEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccc
Q 003384 536 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQ 615 (824)
Q Consensus 536 ~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~ 615 (824)
|||++||+|.+++.. ..++......++.|++.||.|||+ ++|+||||||+|||++.++.+||+|||++.....
T Consensus 122 ~Ey~~gg~L~~~l~~----~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~ 194 (370)
T cd05596 122 MEYMPGGDLVNLMSN----YDIPEKWARFYTAEVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDA 194 (370)
T ss_pred EcCCCCCcHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEEcCCCCEEEEeccceeeccC
Confidence 999999999998842 347888889999999999999999 8999999999999999999999999999986543
Q ss_pred ccccCCCccccccCCCCCCcccCChhhhccC----CCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccC
Q 003384 616 NEISSNNTTLCCRTDPKGTFAYMDPEFLASG----ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLD 691 (824)
Q Consensus 616 ~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~----~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld 691 (824)
.... ......||+.|+|||++.+. .++.++|||||||+||||++|++||.................
T Consensus 195 ~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~--- 264 (370)
T cd05596 195 NGMV-------RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKN--- 264 (370)
T ss_pred CCcc-------cCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCC---
Confidence 2211 01234699999999998653 478899999999999999999999976554321111100000
Q ss_pred CCCCCCChhhHHHHHHHHHHHhhhccCC--CCChH
Q 003384 692 PLAGDWPFVQAEQLANLAMRCCEMSRKS--RPELG 724 (824)
Q Consensus 692 ~~~~~~p~~~~~~l~~Li~~Cl~~~P~~--RPt~~ 724 (824)
..........+..+.+|+.+||+.+|.+ ||++.
T Consensus 265 ~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ 299 (370)
T cd05596 265 SLTFPDDIEISKQAKDLICAFLTDREVRLGRNGVD 299 (370)
T ss_pred cCCCCCcCCCCHHHHHHHHHHccChhhccCCCCHH
Confidence 0110111234678999999999998987 99983
No 147
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=3.7e-35 Score=311.29 Aligned_cols=250 Identities=30% Similarity=0.475 Sum_probs=198.9
Q ss_pred CCCccceeeecCceEEEEEEECC-eEEEEEEecCCCCCCchhHHHHHHHHHhcCCCceeeEecccC-CceEEEEEecCCC
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLRH-MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP-EVWTLVYEYLPNG 542 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~~-~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~-~~~~LV~Ey~~gg 542 (824)
+|.....||+|+||.||+|.+.+ ..||+|.+.... .....+.+|+.+++.++|||++++++++. +..++||||+++|
T Consensus 7 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~~~~ 85 (260)
T cd05069 7 SLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVSEEPIYIVTEFMGKG 85 (260)
T ss_pred HeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCcEEEEEcCCCC
Confidence 57788899999999999998765 579999876543 23457889999999999999999999874 4578999999999
Q ss_pred ChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccccCCC
Q 003384 543 SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNN 622 (824)
Q Consensus 543 sL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~~~~ 622 (824)
+|.+++... ....+++..+..++.+++.||.|||+ .|++|+||||+|||++.++.+||+|||++..........
T Consensus 86 ~L~~~~~~~-~~~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~-- 159 (260)
T cd05069 86 SLLDFLKEG-DGKYLKLPQLVDMAAQIADGMAYIER---MNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTA-- 159 (260)
T ss_pred CHHHHHhhC-CCCCCCHHHHHHHHHHHHHHHHHHHh---CCEeecccCcceEEEcCCCeEEECCCccceEccCCcccc--
Confidence 999998543 23458899999999999999999999 889999999999999999999999999998664332111
Q ss_pred ccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHh-CCCCCCCchHHHHHHhhhccccccCCCCCCCChhh
Q 003384 623 TTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQ 701 (824)
Q Consensus 623 ~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELlt-G~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~ 701 (824)
.....++..|+|||.+.+..++.++|||||||++|+|+| |++||............ ... .....+...
T Consensus 160 -----~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~---~~~---~~~~~~~~~ 228 (260)
T cd05069 160 -----RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQV---ERG---YRMPCPQGC 228 (260)
T ss_pred -----cCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH---HcC---CCCCCCccc
Confidence 122346788999999988899999999999999999999 99999754332211111 010 111223345
Q ss_pred HHHHHHHHHHHhhhccCCCCChHHHHHHHHHH
Q 003384 702 AEQLANLAMRCCEMSRKSRPELGKDVWRVLEP 733 (824)
Q Consensus 702 ~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le~ 733 (824)
+..+.+++.+||..+|.+||++ +.+.+.|+.
T Consensus 229 ~~~~~~li~~~l~~~p~~Rp~~-~~i~~~l~~ 259 (260)
T cd05069 229 PESLHELMKLCWKKDPDERPTF-EYIQSFLED 259 (260)
T ss_pred CHHHHHHHHHHccCCcccCcCH-HHHHHHHhc
Confidence 6789999999999999999999 677776653
No 148
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=1.9e-35 Score=314.79 Aligned_cols=251 Identities=27% Similarity=0.464 Sum_probs=198.3
Q ss_pred CCCCccceeeecCceEEEEEEEC-----CeEEEEEEecCCCCC-CchhHHHHHHHHHhcCCCceeeEecccC--CceEEE
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLLR-----HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLV 535 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~~-----~~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV 535 (824)
.+|...+.||+|+||.||+|.+. +..+|+|.+...... ....|.+|+.+++.++||||+++++++. +..++|
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV 83 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence 46778889999999999999863 246999998654321 2346889999999999999999999883 468899
Q ss_pred EEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccc
Q 003384 536 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQ 615 (824)
Q Consensus 536 ~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~ 615 (824)
|||+++|+|.+++... ...+++.++..++.+++.||.|||+ ++++||||||+|||++.++.+||+|||++..+..
T Consensus 84 ~e~~~~~~L~~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd05066 84 TEYMENGSLDAFLRKH--DGQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILVNSNLVCKVSDFGLSRVLED 158 (267)
T ss_pred EEcCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCEeehhhchhcEEECCCCeEEeCCCCccccccc
Confidence 9999999999999533 3468999999999999999999999 8999999999999999999999999999987654
Q ss_pred ccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHh-CCCCCCCchHHH--HHHhhhccccccCC
Q 003384 616 NEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQ--YALDTGKLKNLLDP 692 (824)
Q Consensus 616 ~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELlt-G~~Pf~~~~~~~--~~~~~~~~~~~ld~ 692 (824)
....... .....++..|+|||++.+..++.++|||||||++|++++ |..||....... ..+..+
T Consensus 159 ~~~~~~~-----~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~-------- 225 (267)
T cd05066 159 DPEAAYT-----TRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEG-------- 225 (267)
T ss_pred ccceeee-----cCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCC--------
Confidence 3211100 122334678999999998899999999999999999886 999996543221 111111
Q ss_pred CCCCCChhhHHHHHHHHHHHhhhccCCCCChHHHHHHHHHH
Q 003384 693 LAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEP 733 (824)
Q Consensus 693 ~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le~ 733 (824)
.....+...+..+.+++.+|++.+|.+||++ .++.+.|+.
T Consensus 226 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~-~~i~~~l~~ 265 (267)
T cd05066 226 YRLPAPMDCPAALHQLMLDCWQKDRNERPKF-EQIVSILDK 265 (267)
T ss_pred CcCCCCCCCCHHHHHHHHHHcccCchhCCCH-HHHHHHHHh
Confidence 1112233456789999999999999999999 677777765
No 149
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=1.8e-35 Score=319.96 Aligned_cols=259 Identities=27% Similarity=0.461 Sum_probs=196.1
Q ss_pred CCCCccceeeecCceEEEEEEECC----------------eEEEEEEecCCCCC-CchhHHHHHHHHHhcCCCceeeEec
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLLRH----------------MQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVG 526 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~~~----------------~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIv~L~g 526 (824)
++|.+.+.||+|+||.||++...+ ..||+|.+...... ....|.+|++++++++||||+++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~ 84 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG 84 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence 468888999999999999987532 24899998754222 2346889999999999999999999
Q ss_pred cc--CCceEEEEEecCCCChhhhhhccC---------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEE
Q 003384 527 AC--PEVWTLVYEYLPNGSLEDRLSCKD---------NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANIL 595 (824)
Q Consensus 527 ~~--~~~~~LV~Ey~~ggsL~~~L~~~~---------~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NIL 595 (824)
++ ....++||||+++++|.+++.... ....+++..++.++.+++.||.|||+ ++++||||||+|||
T Consensus 85 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~---~~i~H~dlkp~Nil 161 (295)
T cd05097 85 VCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLAS---LNFVHRDLATRNCL 161 (295)
T ss_pred EEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHh---cCeeccccChhhEE
Confidence 88 346889999999999999885332 12347889999999999999999999 89999999999999
Q ss_pred ecCCCcceeeccccccccccccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHh--CCCCCCC
Q 003384 596 LDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT--GRPALGI 673 (824)
Q Consensus 596 ld~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELlt--G~~Pf~~ 673 (824)
++.++.+||+|||++..+...... ...+...++..|+|||++.++.++.++|||||||++|+|++ |..||..
T Consensus 162 l~~~~~~kl~dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~ 235 (295)
T cd05097 162 VGNHYTIKIADFGMSRNLYSGDYY------RIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSL 235 (295)
T ss_pred EcCCCcEEecccccccccccCcce------eccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcc
Confidence 999999999999999765432211 01123446789999999998899999999999999999998 6678865
Q ss_pred chHHHHHHhhhcc-ccccCCCCCCCChhhHHHHHHHHHHHhhhccCCCCChHHHHHHHHH
Q 003384 674 TKEVQYALDTGKL-KNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLE 732 (824)
Q Consensus 674 ~~~~~~~~~~~~~-~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le 732 (824)
............. ...........+...+..+.+|+.+||+.+|.+||++ .+|.+.|+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~-~~i~~~l~ 294 (295)
T cd05097 236 LSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTF-NKIHHFLR 294 (295)
T ss_pred cChHHHHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCH-HHHHHHHh
Confidence 4322111111110 0000111111223345789999999999999999999 66766664
No 150
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=2.9e-35 Score=313.35 Aligned_cols=247 Identities=28% Similarity=0.386 Sum_probs=194.6
Q ss_pred hhcCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCCchhHHHHHHHHHhc-CCCceeeEecccC--------
Q 003384 461 GATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKI-RHPNLVTLVGACP-------- 529 (824)
Q Consensus 461 ~~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l-~HpnIv~L~g~~~-------- 529 (824)
.+++.|+..+.||+|+||.||+|... +..||+|.+.... .....+.+|+.++.++ +||||++++++|.
T Consensus 3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (272)
T cd06637 3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD 81 (272)
T ss_pred ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence 45667888999999999999999875 5789999986543 3345788999999998 7999999999873
Q ss_pred CceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccc
Q 003384 530 EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGI 609 (824)
Q Consensus 530 ~~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGl 609 (824)
...++||||+++|+|.+++... ....+++..+..++.|++.||.|||+ ++|+||||||+||+++.++.+||+|||+
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~~-~~~~l~~~~~~~~~~qi~~~l~~LH~---~~ivh~dl~~~nili~~~~~~~l~Dfg~ 157 (272)
T cd06637 82 DQLWLVMEFCGAGSVTDLIKNT-KGNTLKEEWIAYICREILRGLSHLHQ---HKVIHRDIKGQNVLLTENAEVKLVDFGV 157 (272)
T ss_pred cEEEEEEEcCCCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHEEECCCCCEEEccCCC
Confidence 2478999999999999998643 23468899999999999999999999 8999999999999999999999999999
Q ss_pred ccccccccccCCCccccccCCCCCCcccCChhhhc-----cCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhh
Q 003384 610 SRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLA-----SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTG 684 (824)
Q Consensus 610 a~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~-----~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~ 684 (824)
+........ ......|++.|+|||++. +..++.++|||||||++|||++|++||.............
T Consensus 158 ~~~~~~~~~--------~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~ 229 (272)
T cd06637 158 SAQLDRTVG--------RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIP 229 (272)
T ss_pred ceecccccc--------cCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHh
Confidence 876533211 013346899999999986 3458889999999999999999999996543322211111
Q ss_pred ccccccCCCCCCCChhhHHHHHHHHHHHhhhccCCCCChHH
Q 003384 685 KLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 685 ~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
. .+.....+...+..+.+|+.+||..+|.+||++.+
T Consensus 230 ~-----~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ 265 (272)
T cd06637 230 R-----NPAPRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQ 265 (272)
T ss_pred c-----CCCCCCCCCCcCHHHHHHHHHHcCCChhhCCCHHH
Confidence 0 01111112234568999999999999999999843
No 151
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=2.2e-35 Score=334.06 Aligned_cols=259 Identities=25% Similarity=0.409 Sum_probs=201.6
Q ss_pred hhcCCCCccceeeecCceEEEEEEECC-------eEEEEEEecCCCCCC-chhHHHHHHHHHhcC-CCceeeEecccC--
Q 003384 461 GATHNFDPSLKIGEGGYGSIYKGLLRH-------MQVAIKMLHPHSLQG-PSEFQQEIDILSKIR-HPNLVTLVGACP-- 529 (824)
Q Consensus 461 ~~~~~f~~~~~LG~G~fG~Vykg~~~~-------~~VAvK~l~~~~~~~-~~~f~~Ei~iL~~l~-HpnIv~L~g~~~-- 529 (824)
....+|.+.++||+|+||.||+|.+.+ ..||||++....... ...+.+|+.+|.++. ||||++++|+|.
T Consensus 34 ~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~ 113 (401)
T cd05107 34 MPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKG 113 (401)
T ss_pred ecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccC
Confidence 344567888999999999999998643 579999997543222 346889999999997 999999999984
Q ss_pred CceEEEEEecCCCChhhhhhccC---------------------------------------------------------
Q 003384 530 EVWTLVYEYLPNGSLEDRLSCKD--------------------------------------------------------- 552 (824)
Q Consensus 530 ~~~~LV~Ey~~ggsL~~~L~~~~--------------------------------------------------------- 552 (824)
...++||||+++|+|.+++....
T Consensus 114 ~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (401)
T cd05107 114 GPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQ 193 (401)
T ss_pred CCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchh
Confidence 45789999999999999986431
Q ss_pred --------------------------------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcE
Q 003384 553 --------------------------------------NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANI 594 (824)
Q Consensus 553 --------------------------------------~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NI 594 (824)
....+++...+.|+.+++.||.|||+ ++|+||||||+||
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrdlkp~Ni 270 (401)
T cd05107 194 DMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLAS---KNCVHRDLAARNV 270 (401)
T ss_pred cchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhc---CCcCcccCCcceE
Confidence 11347788889999999999999998 8999999999999
Q ss_pred EecCCCcceeeccccccccccccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHh-CCCCCCC
Q 003384 595 LLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGI 673 (824)
Q Consensus 595 Lld~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELlt-G~~Pf~~ 673 (824)
|++.++.+||+|||+++.+........ .....|++.|+|||++.+..++.++|||||||++|||++ |..||..
T Consensus 271 Ll~~~~~~kL~DfGla~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~ 344 (401)
T cd05107 271 LICEGKLVKICDFGLARDIMRDSNYIS------KGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPE 344 (401)
T ss_pred EEeCCCEEEEEecCcceeccccccccc------CCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCC
Confidence 999999999999999986543221100 123357889999999998889999999999999999998 8999965
Q ss_pred chHHHHHHhhhccccccCCCCCCCChhhHHHHHHHHHHHhhhccCCCCChHHHHHHHHHHH
Q 003384 674 TKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM 734 (824)
Q Consensus 674 ~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le~l 734 (824)
.......... +.. ......|...+..+.+|+.+||..+|.+||++ ++++..|+.+
T Consensus 345 ~~~~~~~~~~--~~~---~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~-~ell~~L~~~ 399 (401)
T cd05107 345 LPMNEQFYNA--IKR---GYRMAKPAHASDEIYEIMQKCWEEKFEIRPDF-SQLVHLVGDL 399 (401)
T ss_pred CCchHHHHHH--HHc---CCCCCCCCCCCHHHHHHHHHHcCCChhHCcCH-HHHHHHHHHH
Confidence 4322211110 000 00112234456789999999999999999999 6777888765
No 152
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2e-35 Score=321.11 Aligned_cols=259 Identities=23% Similarity=0.385 Sum_probs=202.5
Q ss_pred cCCCCccceeeecCceEEEEEEEC---------CeEEEEEEecCCC-CCCchhHHHHHHHHHhc-CCCceeeEecccC--
Q 003384 463 THNFDPSLKIGEGGYGSIYKGLLR---------HMQVAIKMLHPHS-LQGPSEFQQEIDILSKI-RHPNLVTLVGACP-- 529 (824)
Q Consensus 463 ~~~f~~~~~LG~G~fG~Vykg~~~---------~~~VAvK~l~~~~-~~~~~~f~~Ei~iL~~l-~HpnIv~L~g~~~-- 529 (824)
..+|.....||+|+||.||+|.+. +..||+|.+.... ......+.+|+.+++.+ +||||+++++++.
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 93 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 93 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecC
Confidence 346788899999999999999752 2469999886532 22345688999999999 8999999999884
Q ss_pred CceEEEEEecCCCChhhhhhccCC-------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEe
Q 003384 530 EVWTLVYEYLPNGSLEDRLSCKDN-------------SPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILL 596 (824)
Q Consensus 530 ~~~~LV~Ey~~ggsL~~~L~~~~~-------------~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILl 596 (824)
...++||||+++|+|.+++..... ...+++..++.++.|++.||.|||+ +||+||||||+|||+
T Consensus 94 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~---~givH~dlkp~Nili 170 (304)
T cd05101 94 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLAS---QKCIHRDLAARNVLV 170 (304)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHH---CCeeecccccceEEE
Confidence 457899999999999999864321 2358889999999999999999999 899999999999999
Q ss_pred cCCCcceeeccccccccccccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHh-CCCCCCCch
Q 003384 597 DANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITK 675 (824)
Q Consensus 597 d~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELlt-G~~Pf~~~~ 675 (824)
+.++.+||+|||+++.......... .....+++.|+|||++.+..++.++|||||||++|+|+| |.+||....
T Consensus 171 ~~~~~~kl~D~g~~~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~ 244 (304)
T cd05101 171 TENNVMKIADFGLARDVNNIDYYKK------TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP 244 (304)
T ss_pred cCCCcEEECCCccceeccccccccc------ccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCC
Confidence 9999999999999986643321111 122346788999999988889999999999999999998 888886543
Q ss_pred HHHHHHhhhccccccCCCCCCCChhhHHHHHHHHHHHhhhccCCCCChHHHHHHHHHHHHhh
Q 003384 676 EVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRAS 737 (824)
Q Consensus 676 ~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le~l~~~ 737 (824)
......... .......+...+..+.+|+.+||..+|.+||++ .++++.|+.+...
T Consensus 245 ~~~~~~~~~------~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~-~e~l~~l~~~~~~ 299 (304)
T cd05101 245 VEELFKLLK------EGHRMDKPANCTNELYMMMRDCWHAIPSHRPTF-KQLVEDLDRILTL 299 (304)
T ss_pred HHHHHHHHH------cCCcCCCCCCCCHHHHHHHHHHcccChhhCCCH-HHHHHHHHHHHHh
Confidence 322111100 011111233456789999999999999999999 7788888887654
No 153
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=4.5e-36 Score=330.39 Aligned_cols=246 Identities=25% Similarity=0.308 Sum_probs=193.7
Q ss_pred CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC---CCchhHHHHHHHHHhcCCCceeeEecccC--CceEEEE
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVY 536 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~---~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~ 536 (824)
++|.....||+|+||.||++... +..||||++..... .....+..|+.+++.++||||+++++++. +..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 36888899999999999999875 57899999875422 22346889999999999999999999884 4688999
Q ss_pred EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccc
Q 003384 537 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQN 616 (824)
Q Consensus 537 Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~ 616 (824)
||+++|+|.+++... ...+++..+..++.|++.||.|||+ ++|+||||||+|||++.++.+||+|||++..+...
T Consensus 81 e~~~~~~L~~~l~~~--~~~l~~~~~~~~~~qi~~aL~~lH~---~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~ 155 (330)
T cd05601 81 EYQPGGDLLSLLNRY--EDQFDEDMAQFYLAELVLAIHSVHQ---MGYVHRDIKPENVLIDRTGHIKLADFGSAARLTAN 155 (330)
T ss_pred CCCCCCCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEcccCchHheEECCCCCEEeccCCCCeECCCC
Confidence 999999999998533 2468999999999999999999999 89999999999999999999999999999866433
Q ss_pred cccCCCccccccCCCCCCcccCChhhhc------cCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhcccccc
Q 003384 617 EISSNNTTLCCRTDPKGTFAYMDPEFLA------SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLL 690 (824)
Q Consensus 617 ~~~~~~~~~~~~~~~~GT~~Y~APE~l~------~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~l 690 (824)
... ......||+.|+|||++. ...++.++|||||||+||+|++|+.||............-.....+
T Consensus 156 ~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~ 228 (330)
T cd05601 156 KMV-------NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRFL 228 (330)
T ss_pred Cce-------eeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCCCcc
Confidence 211 012346899999999986 4567899999999999999999999997654332211111111111
Q ss_pred CCCCCCCChhhHHHHHHHHHHHhhhccCCCCChHH
Q 003384 691 DPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 691 d~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
........+..+.+|+..|+. +|.+||++.+
T Consensus 229 ---~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~ 259 (330)
T cd05601 229 ---KFPEDPKVSSDFLDLIQSLLC-GQKERLGYEG 259 (330)
T ss_pred ---CCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHH
Confidence 111112346789999999998 9999999843
No 154
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=2.2e-35 Score=319.87 Aligned_cols=254 Identities=27% Similarity=0.441 Sum_probs=196.3
Q ss_pred CCCCccceeeecCceEEEEEEECC----eEEEEEEecCCC-CCCchhHHHHHHHHHhc-CCCceeeEecccC--CceEEE
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLLRH----MQVAIKMLHPHS-LQGPSEFQQEIDILSKI-RHPNLVTLVGACP--EVWTLV 535 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~~~----~~VAvK~l~~~~-~~~~~~f~~Ei~iL~~l-~HpnIv~L~g~~~--~~~~LV 535 (824)
++|.+...||+|+||.||+|.... ..+++|.++... ......+.+|+.++.++ +||||+++++++. ...++|
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 81 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA 81 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence 367888899999999999998753 347888876422 22235688999999999 7999999999884 357899
Q ss_pred EEecCCCChhhhhhccC-------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcc
Q 003384 536 YEYLPNGSLEDRLSCKD-------------NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVS 602 (824)
Q Consensus 536 ~Ey~~ggsL~~~L~~~~-------------~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~v 602 (824)
|||+++|+|.+++.... ....+++..++.++.|++.||.|||+ +||+||||||+|||++.++.+
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~---~~ivH~dlkp~Nill~~~~~~ 158 (297)
T cd05089 82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSE---KQFIHRDLAARNVLVGENLAS 158 (297)
T ss_pred EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCcCCcceEEECCCCeE
Confidence 99999999999985422 12358899999999999999999999 899999999999999999999
Q ss_pred eeeccccccccccccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHh-CCCCCCCchHHHHHH
Q 003384 603 KLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYAL 681 (824)
Q Consensus 603 KL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELlt-G~~Pf~~~~~~~~~~ 681 (824)
||+|||++........ ......+..|+|||++.+..++.++|||||||++|||+| |.+||.........
T Consensus 159 kl~dfg~~~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~- 228 (297)
T cd05089 159 KIADFGLSRGEEVYVK---------KTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELY- 228 (297)
T ss_pred EECCcCCCccccceec---------cCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHH-
Confidence 9999999864321100 011223567999999988889999999999999999997 99999654332211
Q ss_pred hhhccccccCCCCCCCChhhHHHHHHHHHHHhhhccCCCCChHHHHHHHHHHHHh
Q 003384 682 DTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRA 736 (824)
Q Consensus 682 ~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le~l~~ 736 (824)
.. .........+...+..+.+|+.+||+.+|.+||++ ..+.+.|+.+..
T Consensus 229 ~~-----~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~-~~i~~~l~~~~~ 277 (297)
T cd05089 229 EK-----LPQGYRMEKPRNCDDEVYELMRQCWRDRPYERPPF-AQISVQLSRMLE 277 (297)
T ss_pred HH-----HhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCH-HHHHHHHHHHHH
Confidence 11 11111112234456789999999999999999999 666677776654
No 155
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=2e-35 Score=318.65 Aligned_cols=256 Identities=24% Similarity=0.412 Sum_probs=197.8
Q ss_pred hcCCCCccceeeecCceEEEEEEEC-------CeEEEEEEecCCCCC-CchhHHHHHHHHHhcCCCceeeEecccC--Cc
Q 003384 462 ATHNFDPSLKIGEGGYGSIYKGLLR-------HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACP--EV 531 (824)
Q Consensus 462 ~~~~f~~~~~LG~G~fG~Vykg~~~-------~~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~ 531 (824)
...+|...+.||+|+||.||+|..+ +..||+|.+...... ....+.+|+.+++.++||||+++++++. ..
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQP 83 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 3457888999999999999999754 247999987643221 1235788999999999999999999874 46
Q ss_pred eEEEEEecCCCChhhhhhccC-------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCccee
Q 003384 532 WTLVYEYLPNGSLEDRLSCKD-------NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKL 604 (824)
Q Consensus 532 ~~LV~Ey~~ggsL~~~L~~~~-------~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL 604 (824)
.++||||+++|+|.+++.... ....+++..+..++.+++.||.|||+ ++|+||||||+|||++.++.+||
T Consensus 84 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dikp~nili~~~~~~~L 160 (288)
T cd05061 84 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA---KKFVHRDLAARNCMVAHDFTVKI 160 (288)
T ss_pred cEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCcCCCCChheEEEcCCCcEEE
Confidence 799999999999999996432 13456778889999999999999999 89999999999999999999999
Q ss_pred eccccccccccccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHh-CCCCCCCchHHHHHHhh
Q 003384 605 SDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDT 683 (824)
Q Consensus 605 ~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELlt-G~~Pf~~~~~~~~~~~~ 683 (824)
+|||+++.......... .....++..|+|||.+.++.++.++|||||||++|||++ |.+||......... .
T Consensus 161 ~Dfg~~~~~~~~~~~~~------~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~-~- 232 (288)
T cd05061 161 GDFGMTRDIYETDYYRK------GGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVL-K- 232 (288)
T ss_pred CcCCccccccccccccc------cCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHH-H-
Confidence 99999986543321111 122345788999999998899999999999999999998 78899654332211 0
Q ss_pred hccccccCCCCCCCChhhHHHHHHHHHHHhhhccCCCCChHHHHHHHHHH
Q 003384 684 GKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEP 733 (824)
Q Consensus 684 ~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le~ 733 (824)
...+......+...+..+.+++.+|++.+|.+||++ .++.+.|..
T Consensus 233 ----~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~-~~ll~~l~~ 277 (288)
T cd05061 233 ----FVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTF-LEIVNLLKD 277 (288)
T ss_pred ----HHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCH-HHHHHHHHh
Confidence 011111112233445789999999999999999999 566666654
No 156
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=4.7e-35 Score=307.95 Aligned_cols=246 Identities=31% Similarity=0.508 Sum_probs=198.5
Q ss_pred ceeeecCceEEEEEEEC-----CeEEEEEEecCCCCCC-chhHHHHHHHHHhcCCCceeeEecccC--CceEEEEEecCC
Q 003384 470 LKIGEGGYGSIYKGLLR-----HMQVAIKMLHPHSLQG-PSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYLPN 541 (824)
Q Consensus 470 ~~LG~G~fG~Vykg~~~-----~~~VAvK~l~~~~~~~-~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~Ey~~g 541 (824)
+.||+|+||.||+|... +..|++|.+....... ...+.+|+.++..++||||+++++++. ...++||||+++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG 80 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence 36999999999999876 6789999998654433 567899999999999999999999884 468899999999
Q ss_pred CChhhhhhccCC------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccc
Q 003384 542 GSLEDRLSCKDN------SPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQ 615 (824)
Q Consensus 542 gsL~~~L~~~~~------~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~ 615 (824)
++|.+++..... ...+++..+..++.+++.||.|||+ ++++||||||+|||++.++.+||+|||++.....
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 157 (262)
T cd00192 81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLAS---KKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYD 157 (262)
T ss_pred CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHc---CCcccCccCcceEEECCCCcEEEccccccccccc
Confidence 999999964421 3679999999999999999999999 8999999999999999999999999999987654
Q ss_pred ccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHh-CCCCCCCchHHHHHHhhhccccccCCCC
Q 003384 616 NEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLA 694 (824)
Q Consensus 616 ~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELlt-G~~Pf~~~~~~~~~~~~~~~~~~ld~~~ 694 (824)
..... ......+++.|+|||.+....++.++|||||||++|+|++ |.+||............. ....
T Consensus 158 ~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~------~~~~ 225 (262)
T cd00192 158 DDYYR------KKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLR------KGYR 225 (262)
T ss_pred ccccc------cccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH------cCCC
Confidence 33110 1133457899999999988899999999999999999999 699997654322111111 1112
Q ss_pred CCCChhhHHHHHHHHHHHhhhccCCCCChHHHHHHHH
Q 003384 695 GDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVL 731 (824)
Q Consensus 695 ~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~L 731 (824)
...+...+..+.+++.+||..+|.+||++ .+++..|
T Consensus 226 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~-~~l~~~l 261 (262)
T cd00192 226 LPKPEYCPDELYELMLSCWQLDPEDRPTF-SELVERL 261 (262)
T ss_pred CCCCccCChHHHHHHHHHccCCcccCcCH-HHHHHhh
Confidence 22344557799999999999999999999 5665544
No 157
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=3.1e-35 Score=311.40 Aligned_cols=248 Identities=27% Similarity=0.445 Sum_probs=190.1
Q ss_pred eeeecCceEEEEEEEC-----CeEEEEEEecCCC-CCCchhHHHHHHHHHhcCCCceeeEecccC---CceEEEEEecCC
Q 003384 471 KIGEGGYGSIYKGLLR-----HMQVAIKMLHPHS-LQGPSEFQQEIDILSKIRHPNLVTLVGACP---EVWTLVYEYLPN 541 (824)
Q Consensus 471 ~LG~G~fG~Vykg~~~-----~~~VAvK~l~~~~-~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~---~~~~LV~Ey~~g 541 (824)
.||+|+||.||+|.+. ...||||.+.... ......+.+|+.+++.++||||++++++|. ...++||||+.+
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~ 81 (262)
T cd05058 2 VIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMKH 81 (262)
T ss_pred cccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCCC
Confidence 5899999999999863 2569999875432 222457889999999999999999999762 347899999999
Q ss_pred CChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccccCC
Q 003384 542 GSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSN 621 (824)
Q Consensus 542 gsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~~~ 621 (824)
|+|.+++... ...+++..+..++.+++.||.|||. .+++||||||+|||++.++.+||+|||+++.+........
T Consensus 82 ~~L~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~ 156 (262)
T cd05058 82 GDLRNFIRSE--THNPTVKDLIGFGLQVAKGMEYLAS---KKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSV 156 (262)
T ss_pred CCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHh---CCccccccCcceEEEcCCCcEEECCccccccccCCcceee
Confidence 9999998533 2346778889999999999999999 8999999999999999999999999999986543221110
Q ss_pred CccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHh-CCCCCCCchHHHHHHhhhccccccCCCCCCCChh
Q 003384 622 NTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWPFV 700 (824)
Q Consensus 622 ~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELlt-G~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~ 700 (824)
. ......++..|+|||++.+..++.++|||||||++|||++ |.+||............ ........+..
T Consensus 157 ~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~ 226 (262)
T cd05058 157 H----NHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYL------LQGRRLLQPEY 226 (262)
T ss_pred c----ccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH------hcCCCCCCCCc
Confidence 0 0123456789999999988899999999999999999999 56777654332211111 11111112233
Q ss_pred hHHHHHHHHHHHhhhccCCCCChHHHHHHHHHHH
Q 003384 701 QAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM 734 (824)
Q Consensus 701 ~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le~l 734 (824)
.+..+.+++.+||..+|.+||++ .+++..|+.+
T Consensus 227 ~~~~~~~li~~cl~~~p~~Rp~~-~~il~~l~~~ 259 (262)
T cd05058 227 CPDPLYEVMLSCWHPKPEMRPTF-SELVSRIEQI 259 (262)
T ss_pred CCHHHHHHHHHHcCCChhhCCCH-HHHHHHHHHH
Confidence 45689999999999999999999 6777777664
No 158
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=5.1e-35 Score=309.59 Aligned_cols=246 Identities=26% Similarity=0.381 Sum_probs=196.1
Q ss_pred CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCC-----CchhHHHHHHHHHhcCCCceeeEecccC--CceEE
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ-----GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTL 534 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~-----~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~L 534 (824)
.+|...+.||.|+||.||+|... +..||+|.+...... ....+.+|+.++++++||||+++++++. +..++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 46888999999999999999864 588999998654221 1246888999999999999999999884 46889
Q ss_pred EEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccc
Q 003384 535 VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLS 614 (824)
Q Consensus 535 V~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~ 614 (824)
||||+++++|.+++.. ...++......++.+++.||.|||. .+|+||||+|+||+++.++.++|+|||+++...
T Consensus 82 v~e~~~~~~l~~~~~~---~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~ 155 (263)
T cd06625 82 FMEYMPGGSVKDQLKA---YGALTETVTRKYTRQILEGVEYLHS---NMIVHRDIKGANILRDSAGNVKLGDFGASKRLQ 155 (263)
T ss_pred EEEECCCCcHHHHHHH---hCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeecccceecc
Confidence 9999999999998853 3468889999999999999999999 899999999999999999999999999987654
Q ss_pred cccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCC
Q 003384 615 QNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLA 694 (824)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~ 694 (824)
....... ......|+..|+|||++.+..++.++|||||||++|+|++|++||.............. ....
T Consensus 156 ~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~-----~~~~ 225 (263)
T cd06625 156 TICSSGT-----GMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIAT-----QPTN 225 (263)
T ss_pred ccccccc-----cccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHhc-----cCCC
Confidence 3211100 00234578999999999998899999999999999999999999965433322211111 1111
Q ss_pred CCCChhhHHHHHHHHHHHhhhccCCCCChHH
Q 003384 695 GDWPFVQAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 695 ~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
...+...+..+.+++.+||..+|.+||++.+
T Consensus 226 ~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ 256 (263)
T cd06625 226 PQLPSHVSPDARNFLRRTFVENAKKRPSAEE 256 (263)
T ss_pred CCCCccCCHHHHHHHHHHhhcCcccCCCHHH
Confidence 2234456678999999999999999999843
No 159
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=2e-35 Score=321.46 Aligned_cols=253 Identities=26% Similarity=0.444 Sum_probs=194.8
Q ss_pred CCCCccceeeecCceEEEEEEEC--Ce--EEEEEEecCCCC-CCchhHHHHHHHHHhc-CCCceeeEecccC--CceEEE
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLLR--HM--QVAIKMLHPHSL-QGPSEFQQEIDILSKI-RHPNLVTLVGACP--EVWTLV 535 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~~--~~--~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l-~HpnIv~L~g~~~--~~~~LV 535 (824)
++|+..+.||+|+||.||+|.+. +. .+|+|.+..... .....+.+|+.++.++ +||||+++++++. ...++|
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv 86 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 86 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEE
Confidence 36788889999999999999875 33 468887654321 2234688999999999 8999999999884 468899
Q ss_pred EEecCCCChhhhhhccC-------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcc
Q 003384 536 YEYLPNGSLEDRLSCKD-------------NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVS 602 (824)
Q Consensus 536 ~Ey~~ggsL~~~L~~~~-------------~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~v 602 (824)
|||+++|+|.+++.... ....+++..++.++.|++.||.|||+ +||+||||||+|||++.++.+
T Consensus 87 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~---~gi~H~dlkp~Nili~~~~~~ 163 (303)
T cd05088 87 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVA 163 (303)
T ss_pred EEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHh---CCccccccchheEEecCCCcE
Confidence 99999999999986432 12368899999999999999999999 899999999999999999999
Q ss_pred eeeccccccccccccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHh-CCCCCCCchHHHHHH
Q 003384 603 KLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYAL 681 (824)
Q Consensus 603 KL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELlt-G~~Pf~~~~~~~~~~ 681 (824)
||+|||++....... . .....++..|+|||++.+..++.++|||||||++|+|+| |.+||.........
T Consensus 164 kl~dfg~~~~~~~~~-----~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~- 233 (303)
T cd05088 164 KIADFGLSRGQEVYV-----K----KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELY- 233 (303)
T ss_pred EeCccccCcccchhh-----h----cccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHHHH-
Confidence 999999986322110 0 012235678999999988889999999999999999998 99999654332211
Q ss_pred hhhccccccCCCCCCCChhhHHHHHHHHHHHhhhccCCCCChHHHHHHHHHHHH
Q 003384 682 DTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMR 735 (824)
Q Consensus 682 ~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le~l~ 735 (824)
.. .........+...+..+.+|+.+||+.+|.+||++ +.++..|..+.
T Consensus 234 ~~-----~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~-~~il~~l~~~~ 281 (303)
T cd05088 234 EK-----LPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSF-AQILVSLNRML 281 (303)
T ss_pred HH-----HhcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCH-HHHHHHHHHHH
Confidence 11 01111112233445689999999999999999999 55666666543
No 160
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=7.1e-35 Score=309.54 Aligned_cols=245 Identities=26% Similarity=0.455 Sum_probs=195.4
Q ss_pred CCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCCc---------hhHHHHHHHHHhcCCCceeeEecccC--Cce
Q 003384 466 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGP---------SEFQQEIDILSKIRHPNLVTLVGACP--EVW 532 (824)
Q Consensus 466 f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~---------~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~ 532 (824)
|.....||.|+||.||+|... +..||+|.+........ +.+.+|+.++++++||||+++++++. +..
T Consensus 2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (267)
T cd06628 2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHL 81 (267)
T ss_pred ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCcc
Confidence 566778999999999999874 57899998875433222 35789999999999999999999873 467
Q ss_pred EEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccc
Q 003384 533 TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRF 612 (824)
Q Consensus 533 ~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~ 612 (824)
++||||+++++|.+++.. ...+++..+..++.+++.||.|||. ++++||||+|+|||++.++.+||+|||+++.
T Consensus 82 ~lv~e~~~~~~L~~~l~~---~~~l~~~~~~~~~~~l~~~l~~lH~---~~ivH~di~p~nil~~~~~~~~l~dfg~~~~ 155 (267)
T cd06628 82 NIFLEYVPGGSVAALLNN---YGAFEETLVRNFVRQILKGLNYLHN---RGIIHRDIKGANILVDNKGGIKISDFGISKK 155 (267)
T ss_pred EEEEEecCCCCHHHHHHh---ccCccHHHHHHHHHHHHHHHHHHHh---cCcccccCCHHHEEEcCCCCEEecccCCCcc
Confidence 899999999999999943 3568889999999999999999999 8899999999999999999999999999987
Q ss_pred cccccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCC
Q 003384 613 LSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDP 692 (824)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~ 692 (824)
........... .......|+..|+|||++.+..++.++|||||||++|+|++|+.||.............. .
T Consensus 156 ~~~~~~~~~~~--~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~------~ 227 (267)
T cd06628 156 LEANSLSTKTN--GARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGE------N 227 (267)
T ss_pred cccccccCCcc--ccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhc------c
Confidence 65322111111 011234588999999999988899999999999999999999999976544332222111 1
Q ss_pred CCCCCChhhHHHHHHHHHHHhhhccCCCCChH
Q 003384 693 LAGDWPFVQAEQLANLAMRCCEMSRKSRPELG 724 (824)
Q Consensus 693 ~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~ 724 (824)
.....+...+..+.+++.+||+.+|.+||++.
T Consensus 228 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ 259 (267)
T cd06628 228 ASPEIPSNISSEAIDFLEKTFEIDHNKRPTAA 259 (267)
T ss_pred CCCcCCcccCHHHHHHHHHHccCCchhCcCHH
Confidence 11223444567899999999999999999984
No 161
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=4.4e-35 Score=311.82 Aligned_cols=250 Identities=27% Similarity=0.406 Sum_probs=196.2
Q ss_pred HhhhcCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCCchhHHHHHHHHHhcCCCceeeEecccC--CceEE
Q 003384 459 IEGATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTL 534 (824)
Q Consensus 459 i~~~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~L 534 (824)
++.++.++.....||+|+||.||+|.+. +..||+|.+..........+.+|+.+++.++||||++++|++. +..++
T Consensus 3 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 82 (268)
T cd06624 3 YEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKI 82 (268)
T ss_pred cccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEE
Confidence 4556777878889999999999999875 4679999887655445567899999999999999999999884 46889
Q ss_pred EEEecCCCChhhhhhccCCCCCC--CHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecC-CCcceeecccccc
Q 003384 535 VYEYLPNGSLEDRLSCKDNSPPL--SWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDA-NFVSKLSDFGISR 611 (824)
Q Consensus 535 V~Ey~~ggsL~~~L~~~~~~~~l--~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~-~~~vKL~DFGla~ 611 (824)
||||+++++|.+++.... .++ +...+..++.|++.||.|||+ ++|+||||||+||+++. ++.+||+|||++.
T Consensus 83 v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~ 157 (268)
T cd06624 83 FMEQVPGGSLSALLRSKW--GPLKDNEQTIIFYTKQILEGLKYLHD---NQIVHRDIKGDNVLVNTYSGVVKISDFGTSK 157 (268)
T ss_pred EEecCCCCCHHHHHHHhc--ccCCCcHHHHHHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEcCCCCeEEEecchhhe
Confidence 999999999999986432 234 778889999999999999999 89999999999999986 6799999999987
Q ss_pred ccccccccCCCccccccCCCCCCcccCChhhhccC--CCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccc
Q 003384 612 FLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG--ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNL 689 (824)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~--~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ 689 (824)
........ .....|++.|+|||++.+. .++.++|||||||++|+|++|++||...............
T Consensus 158 ~~~~~~~~--------~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~--- 226 (268)
T cd06624 158 RLAGINPC--------TETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGM--- 226 (268)
T ss_pred ecccCCCc--------cccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhh---
Confidence 65432111 1223589999999998664 3788999999999999999999999643221111111000
Q ss_pred cCCCCCCCChhhHHHHHHHHHHHhhhccCCCCChHH
Q 003384 690 LDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 690 ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
.......|......+.+++.+||+.+|.+||++.+
T Consensus 227 -~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ 261 (268)
T cd06624 227 -FKIHPEIPESLSAEAKNFILRCFEPDPDKRASAHD 261 (268)
T ss_pred -hccCCCCCcccCHHHHHHHHHHcCCCchhCCCHHH
Confidence 01112234455678999999999999999999943
No 162
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=1e-35 Score=327.15 Aligned_cols=238 Identities=24% Similarity=0.311 Sum_probs=185.4
Q ss_pred eeeecCceEEEEEEEC--CeEEEEEEecCCCC---CCchhHHHHHH-HHHhcCCCceeeEeccc--CCceEEEEEecCCC
Q 003384 471 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEID-ILSKIRHPNLVTLVGAC--PEVWTLVYEYLPNG 542 (824)
Q Consensus 471 ~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~---~~~~~f~~Ei~-iL~~l~HpnIv~L~g~~--~~~~~LV~Ey~~gg 542 (824)
.||+|+||.||+|... +..||+|++..... .....+..|.. +++.++||||+++++++ .+..++||||+++|
T Consensus 2 ~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~~ 81 (325)
T cd05602 2 VIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGG 81 (325)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCCC
Confidence 6999999999999886 46799999865321 11223444444 56788999999999987 45689999999999
Q ss_pred ChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccccCCC
Q 003384 543 SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNN 622 (824)
Q Consensus 543 sL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~~~~ 622 (824)
+|.+++.. ...++......++.||+.||.|||+ +||+||||||+|||++.++.+||+|||+++.......
T Consensus 82 ~L~~~~~~---~~~~~~~~~~~~~~qi~~~L~~lH~---~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~---- 151 (325)
T cd05602 82 ELFYHLQR---ERCFLEPRARFYAAEIASALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNG---- 151 (325)
T ss_pred cHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEECCCCCEEEccCCCCcccccCCC----
Confidence 99998853 3457788888999999999999999 8999999999999999999999999999875322111
Q ss_pred ccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCCCCChhhH
Q 003384 623 TTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQA 702 (824)
Q Consensus 623 ~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~ 702 (824)
......||+.|+|||++.+..++.++|||||||++|+|++|++||............ ... ....+...+
T Consensus 152 ----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i--~~~-----~~~~~~~~~ 220 (325)
T cd05602 152 ----TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNI--LNK-----PLQLKPNIT 220 (325)
T ss_pred ----CcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHH--HhC-----CcCCCCCCC
Confidence 012346999999999999999999999999999999999999999765433211110 000 111233456
Q ss_pred HHHHHHHHHHhhhccCCCCChHHHHHH
Q 003384 703 EQLANLAMRCCEMSRKSRPELGKDVWR 729 (824)
Q Consensus 703 ~~l~~Li~~Cl~~~P~~RPt~~~~v~~ 729 (824)
..+.+++.+|++.+|.+||+..+.+.+
T Consensus 221 ~~~~~li~~~l~~~p~~R~~~~~~~~~ 247 (325)
T cd05602 221 NSARHLLEGLLQKDRTKRLGAKDDFME 247 (325)
T ss_pred HHHHHHHHHHcccCHHHCCCCCCCHHH
Confidence 789999999999999999998544433
No 163
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=3.8e-35 Score=312.70 Aligned_cols=254 Identities=25% Similarity=0.390 Sum_probs=201.0
Q ss_pred CCCCccceeeecCceEEEEEEECC-----eEEEEEEecCCC-CCCchhHHHHHHHHHhcCCCceeeEecccC-CceEEEE
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLLRH-----MQVAIKMLHPHS-LQGPSEFQQEIDILSKIRHPNLVTLVGACP-EVWTLVY 536 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~~~-----~~VAvK~l~~~~-~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~-~~~~LV~ 536 (824)
.+|...+.||+|+||.||+|.+.. ..||||...... ....+.+.+|+.+++.++||||++++++|. +..++||
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~lv~ 85 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITENPVWIVM 85 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcCCCcEEEE
Confidence 357788899999999999998643 368999886543 223457899999999999999999999884 4578999
Q ss_pred EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccc
Q 003384 537 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQN 616 (824)
Q Consensus 537 Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~ 616 (824)
||+++|+|.+++... ...+++..+..++.+++.||.|||+ .+++||||||+|||++.++.+||+|||+++.....
T Consensus 86 e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~l~~~l~~lH~---~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~ 160 (270)
T cd05056 86 ELAPLGELRSYLQVN--KYSLDLASLILYSYQLSTALAYLES---KRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDE 160 (270)
T ss_pred EcCCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccccChheEEEecCCCeEEccCceeeecccc
Confidence 999999999999533 3358999999999999999999999 88999999999999999999999999999866443
Q ss_pred cccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHh-CCCCCCCchHHHHHHhhhccccccCCCCC
Q 003384 617 EISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAG 695 (824)
Q Consensus 617 ~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELlt-G~~Pf~~~~~~~~~~~~~~~~~~ld~~~~ 695 (824)
.... .....++..|+|||.+....++.++|||||||++|+|++ |.+||................ ..
T Consensus 161 ~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~------~~ 227 (270)
T cd05056 161 SYYK-------ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENGE------RL 227 (270)
T ss_pred ccee-------cCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCC------cC
Confidence 2111 112235678999999988889999999999999999996 999997654332221111110 01
Q ss_pred CCChhhHHHHHHHHHHHhhhccCCCCChHHHHHHHHHHHHh
Q 003384 696 DWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRA 736 (824)
Q Consensus 696 ~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le~l~~ 736 (824)
..+...+..+.+++.+|+..+|.+||++ .++...|+.+..
T Consensus 228 ~~~~~~~~~~~~li~~~l~~~P~~Rpt~-~~~~~~l~~~~~ 267 (270)
T cd05056 228 PMPPNCPPTLYSLMTKCWAYDPSKRPRF-TELKAQLSDILQ 267 (270)
T ss_pred CCCCCCCHHHHHHHHHHcCCChhhCcCH-HHHHHHHHHHHh
Confidence 1233456789999999999999999999 667777776643
No 164
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=1.8e-35 Score=331.74 Aligned_cols=242 Identities=24% Similarity=0.330 Sum_probs=188.6
Q ss_pred cCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCC---CCCchhHHHHHHHHHhcCCCceeeEecccC--CceEEE
Q 003384 463 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS---LQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLV 535 (824)
Q Consensus 463 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~---~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV 535 (824)
..+|...+.||+|+||.||++... +..||+|++.... ......+.+|+.+++.++||||+++++++. ...++|
T Consensus 42 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv 121 (370)
T cd05621 42 AEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMV 121 (370)
T ss_pred HHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEE
Confidence 357888999999999999999886 4789999986421 122345789999999999999999999884 468999
Q ss_pred EEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccc
Q 003384 536 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQ 615 (824)
Q Consensus 536 ~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~ 615 (824)
|||++||+|.+++.. ..++......++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+|..+..
T Consensus 122 ~Ey~~gg~L~~~l~~----~~~~~~~~~~~~~qil~aL~~LH~---~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~ 194 (370)
T cd05621 122 MEYMPGGDLVNLMSN----YDVPEKWAKFYTAEVVLALDAIHS---MGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDE 194 (370)
T ss_pred EcCCCCCcHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHEEECCCCCEEEEecccceeccc
Confidence 999999999999842 247888999999999999999999 8999999999999999999999999999986543
Q ss_pred ccccCCCccccccCCCCCCcccCChhhhccC----CCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccC
Q 003384 616 NEISSNNTTLCCRTDPKGTFAYMDPEFLASG----ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLD 691 (824)
Q Consensus 616 ~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~----~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld 691 (824)
.... ......||+.|+|||++.+. .++.++|||||||+||+|+||++||........... +.+
T Consensus 195 ~~~~-------~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~------i~~ 261 (370)
T cd05621 195 TGMV-------RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSK------IMD 261 (370)
T ss_pred CCce-------ecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHH------HHh
Confidence 2211 01345699999999998764 378899999999999999999999976543221111 111
Q ss_pred C-CCCCCC--hhhHHHHHHHHHHHhhhccCC--CCChH
Q 003384 692 P-LAGDWP--FVQAEQLANLAMRCCEMSRKS--RPELG 724 (824)
Q Consensus 692 ~-~~~~~p--~~~~~~l~~Li~~Cl~~~P~~--RPt~~ 724 (824)
. ....+| ...+..+.+++..|+..++.+ ||++.
T Consensus 262 ~~~~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~ 299 (370)
T cd05621 262 HKNSLNFPEDVEISKHAKNLICAFLTDREVRLGRNGVE 299 (370)
T ss_pred CCcccCCCCcccCCHHHHHHHHHHccCchhccCCCCHH
Confidence 0 001122 234668899999999755433 78873
No 165
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=6.9e-36 Score=346.52 Aligned_cols=261 Identities=23% Similarity=0.329 Sum_probs=203.1
Q ss_pred hhcCCCCccceeeecCceEEEEEEECC--eEEEEEEecCCCCCCchhHHHHHHHHHhcC-CCceeeEeccc-----CC--
Q 003384 461 GATHNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQEIDILSKIR-HPNLVTLVGAC-----PE-- 530 (824)
Q Consensus 461 ~~~~~f~~~~~LG~G~fG~Vykg~~~~--~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~-HpnIv~L~g~~-----~~-- 530 (824)
....++.+.+.|.+|||+.||.+.+.+ ..||+|++-..+....+.+.+||++|++|. |||||.+++.+ .+
T Consensus 34 Vg~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~ 113 (738)
T KOG1989|consen 34 VGSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNG 113 (738)
T ss_pred ECCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCc
Confidence 345567888899999999999998863 789999988777677778999999999997 99999999943 11
Q ss_pred --ceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccc
Q 003384 531 --VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFG 608 (824)
Q Consensus 531 --~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFG 608 (824)
.++|.||||.||+|-|++..+.... |++.++++|+.++++|+.+||++.+ +|||||||-+||||+.+|+.||||||
T Consensus 114 ~~EvllLmEyC~gg~Lvd~mn~Rlq~~-lte~eVLkIf~dv~~AVa~mH~~~p-PiIHRDLKiENvLls~~g~~KLCDFG 191 (738)
T KOG1989|consen 114 VWEVLLLMEYCKGGSLVDFMNTRLQTR-LTEDEVLKIFYDVCEAVAAMHYLKP-PIIHRDLKIENVLLSADGNYKLCDFG 191 (738)
T ss_pred eeEEEeehhhccCCcHHHHHHHHHhcc-CChHHHHHHHHHHHHHHHHHhcCCC-ccchhhhhhhheEEcCCCCEEeCccc
Confidence 3568999999999999996554433 9999999999999999999999874 89999999999999999999999999
Q ss_pred cccccccccccCCCc-cccccCCCCCCcccCChhhh---ccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhh
Q 003384 609 ISRFLSQNEISSNNT-TLCCRTDPKGTFAYMDPEFL---ASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTG 684 (824)
Q Consensus 609 la~~~~~~~~~~~~~-~~~~~~~~~GT~~Y~APE~l---~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~ 684 (824)
.+............. .....-...-|+.|.|||++ .+.+++.|+|||+|||+||-|+....||+..... ++..+
T Consensus 192 Satt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~l--aIlng 269 (738)
T KOG1989|consen 192 SATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKL--AILNG 269 (738)
T ss_pred ccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcce--eEEec
Confidence 987443322111100 00000111248999999987 4568999999999999999999999999765321 12222
Q ss_pred ccccccCCCCCCCChhhHHHHHHHHHHHhhhccCCCCChHHHHHHHHH
Q 003384 685 KLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLE 732 (824)
Q Consensus 685 ~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le 732 (824)
++.- +. ...++..+.+||..||+.+|.+||++.+++.++.+
T Consensus 270 ~Y~~------P~-~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~ 310 (738)
T KOG1989|consen 270 NYSF------PP-FPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFE 310 (738)
T ss_pred cccC------CC-CccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHH
Confidence 2111 11 23678899999999999999999999665544433
No 166
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=9e-36 Score=332.37 Aligned_cols=249 Identities=23% Similarity=0.294 Sum_probs=190.7
Q ss_pred CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCC---CCCchhHHHHHHHHHhcCCCceeeEecccC--CceEEEEE
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS---LQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYE 537 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~---~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~E 537 (824)
+|+..+.||+|+||.||++... +..||||++.... ......+..|+.++..++||||+++++.+. +..++|||
T Consensus 2 ~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~E 81 (360)
T cd05627 2 DFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIME 81 (360)
T ss_pred CceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEe
Confidence 6888899999999999999875 5789999987532 222456888999999999999999999884 46899999
Q ss_pred ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccccc
Q 003384 538 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNE 617 (824)
Q Consensus 538 y~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~ 617 (824)
|++||+|.+++.. ...++...+..++.|++.||.|||+ +||+||||||+|||++.+|.+||+|||++..+....
T Consensus 82 ~~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~~L~~lH~---~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~ 155 (360)
T cd05627 82 FLPGGDMMTLLMK---KDTLSEEATQFYIAETVLAIDAIHQ---LGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAH 155 (360)
T ss_pred CCCCccHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEccCCCHHHEEECCCCCEEEeeccCCccccccc
Confidence 9999999999843 3568899999999999999999999 899999999999999999999999999987553221
Q ss_pred ccCCC---------------------------ccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCC
Q 003384 618 ISSNN---------------------------TTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPA 670 (824)
Q Consensus 618 ~~~~~---------------------------~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~P 670 (824)
..... ..........||+.|+|||++.+..++.++|||||||++|||+||++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~P 235 (360)
T cd05627 156 RTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPP 235 (360)
T ss_pred ccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCC
Confidence 00000 000001234799999999999999999999999999999999999999
Q ss_pred CCCchHHHHHHhhhccccccCCCCCCCChhhHHHHHHHHHHHhhhccCCCCCh
Q 003384 671 LGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPEL 723 (824)
Q Consensus 671 f~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~ 723 (824)
|..................+. .......+..+.+|+.+++. +|.+|++.
T Consensus 236 f~~~~~~~~~~~i~~~~~~~~---~p~~~~~s~~~~~li~~l~~-~p~~R~~~ 284 (360)
T cd05627 236 FCSETPQETYRKVMNWKETLV---FPPEVPISEKAKDLILRFCT-DSENRIGS 284 (360)
T ss_pred CCCCCHHHHHHHHHcCCCcee---cCCCCCCCHHHHHHHHHhcc-ChhhcCCC
Confidence 976543322111111111110 00011245678889988774 99999964
No 167
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-35 Score=331.88 Aligned_cols=247 Identities=26% Similarity=0.382 Sum_probs=206.2
Q ss_pred CCccceeeecCceEEEEEEECC-----eEEEEEEecCCCCC-CchhHHHHHHHHHhcCCCceeeEecccC-CceEEEEEe
Q 003384 466 FDPSLKIGEGGYGSIYKGLLRH-----MQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACP-EVWTLVYEY 538 (824)
Q Consensus 466 f~~~~~LG~G~fG~Vykg~~~~-----~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIv~L~g~~~-~~~~LV~Ey 538 (824)
....++||+|.||.|++|.|+. -.||||.+...... ....|.+|+.+|.+|+|||+|+|||... ....+|||+
T Consensus 112 i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~qp~mMV~EL 191 (1039)
T KOG0199|consen 112 IKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLDQPAMMVFEL 191 (1039)
T ss_pred HHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeeccchhhHHhhh
Confidence 3456689999999999999973 46999999876554 4678999999999999999999999986 457799999
Q ss_pred cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccc
Q 003384 539 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEI 618 (824)
Q Consensus 539 ~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~ 618 (824)
++.|||.+.|+. .....|.......++.|||.|+.||.. +++|||||...|+||-..-.+||+||||.+-+...+.
T Consensus 192 aplGSLldrLrk-a~~~~llv~~Lcdya~QiA~aM~YLes---krlvHRDLAARNlllasprtVKI~DFGLmRaLg~ned 267 (1039)
T KOG0199|consen 192 APLGSLLDRLRK-AKKAILLVSRLCDYAMQIAKAMQYLES---KRLVHRDLAARNLLLASPRTVKICDFGLMRALGENED 267 (1039)
T ss_pred cccchHHHHHhh-ccccceeHHHHHHHHHHHHHHHHHHhh---hhhhhhhhhhhhheecccceeeeecccceeccCCCCc
Confidence 999999999976 566778899999999999999999999 8999999999999999999999999999998776543
Q ss_pred cCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHh-CCCCCCCchHHHHHHhhhccccccCCCCCCC
Q 003384 619 SSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDW 697 (824)
Q Consensus 619 ~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELlt-G~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~ 697 (824)
.-.. .....-.+.|+|||.+....++.++|||+|||++|||+| |..||.+....+..... -+......
T Consensus 268 ~Yvm-----~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~i------D~~erLpR 336 (1039)
T KOG0199|consen 268 MYVM-----APQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNI------DAGERLPR 336 (1039)
T ss_pred ceEe-----cCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhc------cccccCCC
Confidence 2111 122345789999999999999999999999999999998 88999776654422111 12223456
Q ss_pred ChhhHHHHHHHHHHHhhhccCCCCChHHHH
Q 003384 698 PFVQAEQLANLAMRCCEMSRKSRPELGKDV 727 (824)
Q Consensus 698 p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v 727 (824)
|..+++++.+++..||..+|.+||++....
T Consensus 337 Pk~csedIY~imk~cWah~paDRptFsair 366 (1039)
T KOG0199|consen 337 PKYCSEDIYQIMKNCWAHNPADRPTFSAIR 366 (1039)
T ss_pred CCCChHHHHHHHHHhccCCccccccHHHHH
Confidence 788899999999999999999999995443
No 168
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=4.3e-35 Score=314.57 Aligned_cols=242 Identities=25% Similarity=0.375 Sum_probs=192.0
Q ss_pred CCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCCchhHHHHHHHHHhcCCCceeeEeccc--CCceEEEEEecCC
Q 003384 466 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYLPN 541 (824)
Q Consensus 466 f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~--~~~~~LV~Ey~~g 541 (824)
|+..+.||.|+||.||+|... +..+++|.+..........+.+|+++++.++||||++++++| ....++||||+++
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~ 86 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG 86 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCC
Confidence 566778999999999999886 467899988655444456788999999999999999999987 4468899999999
Q ss_pred CChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccccCC
Q 003384 542 GSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSN 621 (824)
Q Consensus 542 gsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~~~ 621 (824)
|+|..++.. ...++++..+..++.+++.||.|||+ .+++||||||+|||++.++.+||+|||++........
T Consensus 87 ~~l~~~~~~--~~~~l~~~~~~~~~~qi~~~L~~LH~---~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~--- 158 (282)
T cd06643 87 GAVDAVMLE--LERPLTEPQIRVVCKQTLEALNYLHE---NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQ--- 158 (282)
T ss_pred CcHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCcccEEEccCCCEEEcccccccccccccc---
Confidence 999988753 23568999999999999999999999 8999999999999999999999999999875432211
Q ss_pred CccccccCCCCCCcccCChhhhc-----cCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCCC
Q 003384 622 NTTLCCRTDPKGTFAYMDPEFLA-----SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGD 696 (824)
Q Consensus 622 ~~~~~~~~~~~GT~~Y~APE~l~-----~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~ 696 (824)
......||+.|+|||++. +..++.++|||||||++|+|++|++||................ .+ ...
T Consensus 159 -----~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~---~~-~~~ 229 (282)
T cd06643 159 -----RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSE---PP-TLA 229 (282)
T ss_pred -----ccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcC---CC-CCC
Confidence 112345899999999984 3457889999999999999999999997654433222211110 00 111
Q ss_pred CChhhHHHHHHHHHHHhhhccCCCCChH
Q 003384 697 WPFVQAEQLANLAMRCCEMSRKSRPELG 724 (824)
Q Consensus 697 ~p~~~~~~l~~Li~~Cl~~~P~~RPt~~ 724 (824)
.+...+..+.+++.+||+.+|.+||++.
T Consensus 230 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~ 257 (282)
T cd06643 230 QPSRWSSEFKDFLKKCLEKNVDARWTTT 257 (282)
T ss_pred CccccCHHHHHHHHHHccCChhhCcCHH
Confidence 2333457899999999999999999984
No 169
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-36 Score=317.60 Aligned_cols=253 Identities=25% Similarity=0.336 Sum_probs=197.3
Q ss_pred hcCCCCccceeeecCceEEEEEEEC--CeEEEEEEecC--CCCCCchhHHHHHHHHHhcCCCceeeEecccC-------C
Q 003384 462 ATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHP--HSLQGPSEFQQEIDILSKIRHPNLVTLVGACP-------E 530 (824)
Q Consensus 462 ~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~--~~~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~-------~ 530 (824)
....|...+.||.|+||.|+.+.++ +..||||++.. ......++..+|+.+|+.++|+||+.+++++. .
T Consensus 20 i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~ 99 (359)
T KOG0660|consen 20 IPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFN 99 (359)
T ss_pred ccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccc
Confidence 4456777789999999999999876 58899999873 33344567889999999999999999999873 2
Q ss_pred ceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccc
Q 003384 531 VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGIS 610 (824)
Q Consensus 531 ~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla 610 (824)
..|+|+|+| +.+|...+. .+..|+......+..|+++||.|+|+ .+|+||||||+|+|++.+..+||+|||||
T Consensus 100 DvYiV~elM-etDL~~iik---~~~~L~d~H~q~f~YQiLrgLKyiHS---AnViHRDLKPsNll~n~~c~lKI~DFGLA 172 (359)
T KOG0660|consen 100 DVYLVFELM-ETDLHQIIK---SQQDLTDDHAQYFLYQILRGLKYIHS---ANVIHRDLKPSNLLLNADCDLKICDFGLA 172 (359)
T ss_pred eeEEehhHH-hhHHHHHHH---cCccccHHHHHHHHHHHHHhcchhhc---ccccccccchhheeeccCCCEEeccccce
Confidence 479999999 678999984 34458999999999999999999999 78999999999999999999999999999
Q ss_pred cccccccccCCCccccccCCCCCCcccCChhhhcc-CCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhh------
Q 003384 611 RFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLAS-GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDT------ 683 (824)
Q Consensus 611 ~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~------ 683 (824)
+...... .....+..+.|.+|.|||++.. ..|+...||||.||||.||++|+|.|.+.+.+.+.-..
T Consensus 173 R~~~~~~------~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGt 246 (359)
T KOG0660|consen 173 RYLDKFF------EDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGT 246 (359)
T ss_pred eeccccC------cccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCC
Confidence 9876431 1112355678999999998765 58999999999999999999999999876554322110
Q ss_pred -----------hccccccC--CCCCCCC-----hhhHHHHHHHHHHHhhhccCCCCChHHHH
Q 003384 684 -----------GKLKNLLD--PLAGDWP-----FVQAEQLANLAMRCCEMSRKSRPELGKDV 727 (824)
Q Consensus 684 -----------~~~~~~ld--~~~~~~p-----~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v 727 (824)
......+. |.....| ....+...+|+.+||..||.+|+|..+.+
T Consensus 247 P~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL 308 (359)
T KOG0660|consen 247 PSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEAL 308 (359)
T ss_pred CCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHh
Confidence 00111111 0011111 13456889999999999999999985433
No 170
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-34 Score=308.37 Aligned_cols=256 Identities=25% Similarity=0.411 Sum_probs=202.4
Q ss_pred cCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCC-CCC------chhHHHHHHHHHhcCCCceeeEeccc---CC
Q 003384 463 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS-LQG------PSEFQQEIDILSKIRHPNLVTLVGAC---PE 530 (824)
Q Consensus 463 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~-~~~------~~~f~~Ei~iL~~l~HpnIv~L~g~~---~~ 530 (824)
..+|-...+||+|||++||++.+- .+.||||+-.... ..+ .+...+|.+|.+.|+||.||++|++| .+
T Consensus 462 n~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtd 541 (775)
T KOG1151|consen 462 NDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTD 541 (775)
T ss_pred HHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccc
Confidence 346778889999999999999764 5789999865431 111 13467899999999999999999998 46
Q ss_pred ceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEec---CCCcceeecc
Q 003384 531 VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLD---ANFVSKLSDF 607 (824)
Q Consensus 531 ~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld---~~~~vKL~DF 607 (824)
.+|-|+|||+|.+|..+|. ....+++.....|+.||..||.||....+ +|||-||||.||||- ..|.+||.||
T Consensus 542 sFCTVLEYceGNDLDFYLK---QhklmSEKEARSIiMQiVnAL~YLNEikp-PIIHYDLKPgNILLv~GtacGeIKITDF 617 (775)
T KOG1151|consen 542 SFCTVLEYCEGNDLDFYLK---QHKLMSEKEARSIIMQIVNALKYLNEIKP-PIIHYDLKPGNILLVNGTACGEIKITDF 617 (775)
T ss_pred cceeeeeecCCCchhHHHH---hhhhhhHHHHHHHHHHHHHHHHHHhccCC-CeeeeccCCccEEEecCcccceeEeeec
Confidence 7999999999999999994 34568899999999999999999999774 899999999999995 4578999999
Q ss_pred ccccccccccccCCCccccccCCCCCCcccCChhhhccC----CCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhh
Q 003384 608 GISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG----ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDT 683 (824)
Q Consensus 608 Gla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~----~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~ 683 (824)
||++.+........... .......||.+|++||+|.-+ .++.++||||.|||||.++.|+.||+....-+..+..
T Consensus 618 GLSKIMdddSy~~vdGm-eLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqe 696 (775)
T KOG1151|consen 618 GLSKIMDDDSYNSVDGM-ELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQE 696 (775)
T ss_pred chhhhccCCccCcccce-eeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhh
Confidence 99998876654322211 122457899999999998654 4778999999999999999999999877655555555
Q ss_pred hccccccCCCCCCCChhhHHHHHHHHHHHhhhccCCCCChH
Q 003384 684 GKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELG 724 (824)
Q Consensus 684 ~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~ 724 (824)
+.+...-....+..| ..+.+...+|.+||++.-++|.+..
T Consensus 697 NTIlkAtEVqFP~KP-vVsseAkaFIRRCLaYRKeDR~DV~ 736 (775)
T KOG1151|consen 697 NTILKATEVQFPPKP-VVSSEAKAFIRRCLAYRKEDRIDVQ 736 (775)
T ss_pred hchhcceeccCCCCC-ccCHHHHHHHHHHHHhhhhhhhhHH
Confidence 544333322222222 4556889999999999999998863
No 171
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=3.9e-35 Score=325.21 Aligned_cols=254 Identities=25% Similarity=0.386 Sum_probs=197.5
Q ss_pred CCCCccceeeecCceEEEEEEEC-------CeEEEEEEecCCCCC-CchhHHHHHHHHHhc-CCCceeeEecccC---Cc
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLLR-------HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKI-RHPNLVTLVGACP---EV 531 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~~-------~~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l-~HpnIv~L~g~~~---~~ 531 (824)
.+|.+.+.||+|+||.||+|.+. ++.||||++...... ....+.+|+.+|.++ +||||++++++|. ..
T Consensus 7 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~ 86 (343)
T cd05103 7 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGP 86 (343)
T ss_pred hHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCc
Confidence 46888999999999999999742 467999999754322 234588999999999 6899999999873 35
Q ss_pred eEEEEEecCCCChhhhhhccCC----------------------------------------------------------
Q 003384 532 WTLVYEYLPNGSLEDRLSCKDN---------------------------------------------------------- 553 (824)
Q Consensus 532 ~~LV~Ey~~ggsL~~~L~~~~~---------------------------------------------------------- 553 (824)
.++||||+++|+|.+++.....
T Consensus 87 ~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (343)
T cd05103 87 LMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEA 166 (343)
T ss_pred eEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhhh
Confidence 7899999999999998854210
Q ss_pred ------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccccCCCccccc
Q 003384 554 ------SPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCC 627 (824)
Q Consensus 554 ------~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~~~~~~~~~ 627 (824)
...+++..+..++.+++.||.|||+ ++|+||||||+|||++.++.+||+|||++..+....... .
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~------~ 237 (343)
T cd05103 167 EQEDLYKKVLTLEDLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYV------R 237 (343)
T ss_pred hhhhhhhccCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCccCeEEEcCCCcEEEEecccccccccCcchh------h
Confidence 1247888899999999999999999 899999999999999999999999999998653322110 1
Q ss_pred cCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHh-CCCCCCCchH---HHHHHhhhccccccCCCCCCCChhhHH
Q 003384 628 RTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKE---VQYALDTGKLKNLLDPLAGDWPFVQAE 703 (824)
Q Consensus 628 ~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELlt-G~~Pf~~~~~---~~~~~~~~~~~~~ld~~~~~~p~~~~~ 703 (824)
.....+++.|+|||++.+..++.++|||||||++|+|++ |..||..... ....+..+. ....|...+.
T Consensus 238 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~ 309 (343)
T cd05103 238 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT--------RMRAPDYTTP 309 (343)
T ss_pred cCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccC--------CCCCCCCCCH
Confidence 122346778999999988899999999999999999997 9999965322 111111111 1111223456
Q ss_pred HHHHHHHHHhhhccCCCCChHHHHHHHHHHHH
Q 003384 704 QLANLAMRCCEMSRKSRPELGKDVWRVLEPMR 735 (824)
Q Consensus 704 ~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le~l~ 735 (824)
.+.+++.+||+.+|.+||++ .++++.|+.+.
T Consensus 310 ~~~~~~~~cl~~~p~~Rps~-~eil~~l~~~~ 340 (343)
T cd05103 310 EMYQTMLDCWHGEPSQRPTF-SELVEHLGNLL 340 (343)
T ss_pred HHHHHHHHHccCChhhCcCH-HHHHHHHHHHH
Confidence 79999999999999999999 67777777654
No 172
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=6.2e-35 Score=316.56 Aligned_cols=244 Identities=25% Similarity=0.385 Sum_probs=196.9
Q ss_pred CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCCchhHHHHHHHHHhcCCCceeeEeccc--CCceEEEEEec
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYL 539 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~--~~~~~LV~Ey~ 539 (824)
.+|...+.||+|+||.||+|... +..||+|.+..........+.+|+.+++.++||||+++++.| ....++||||+
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~ 99 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL 99 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeeccc
Confidence 47888899999999999999864 578999998766555556789999999999999999999987 45689999999
Q ss_pred CCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccccccc
Q 003384 540 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEIS 619 (824)
Q Consensus 540 ~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~ 619 (824)
++++|.+++. ...+++..+..++.+++.||.|||+ .||+||||||+|||++.++.+||+|||++.........
T Consensus 100 ~~~~L~~~~~----~~~~~~~~~~~i~~ql~~aL~~LH~---~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~~ 172 (296)
T cd06654 100 AGGSLTDVVT----ETCMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK 172 (296)
T ss_pred CCCCHHHHHH----hcCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCCCEEECccccchhccccccc
Confidence 9999999884 2357889999999999999999999 89999999999999999999999999998764332111
Q ss_pred CCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCCCCCh
Q 003384 620 SNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPF 699 (824)
Q Consensus 620 ~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~ 699 (824)
.....|++.|+|||++.+..++.++|||||||++|+|++|++||............... ..+ ....+.
T Consensus 173 --------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~---~~~-~~~~~~ 240 (296)
T cd06654 173 --------RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATN---GTP-ELQNPE 240 (296)
T ss_pred --------cCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcC---CCC-CCCCcc
Confidence 12345899999999999888999999999999999999999999765432221111100 000 111233
Q ss_pred hhHHHHHHHHHHHhhhccCCCCChHHH
Q 003384 700 VQAEQLANLAMRCCEMSRKSRPELGKD 726 (824)
Q Consensus 700 ~~~~~l~~Li~~Cl~~~P~~RPt~~~~ 726 (824)
..+..+.+++.+||..+|.+||++.+.
T Consensus 241 ~~~~~l~~li~~~l~~~p~~Rpt~~ei 267 (296)
T cd06654 241 KLSAIFRDFLNRCLDMDVEKRGSAKEL 267 (296)
T ss_pred ccCHHHHHHHHHHCcCCcccCcCHHHH
Confidence 455679999999999999999998443
No 173
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=4.8e-35 Score=326.28 Aligned_cols=245 Identities=22% Similarity=0.298 Sum_probs=187.9
Q ss_pred cCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCC--CCCchhHHHHHHHHHhcCCCceeeEecccC--------C
Q 003384 463 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS--LQGPSEFQQEIDILSKIRHPNLVTLVGACP--------E 530 (824)
Q Consensus 463 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~--~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--------~ 530 (824)
.++|...+.||+|+||.||++... +..||||++.... ......+.+|+.+++.++||||+++++++. .
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 99 (359)
T cd07876 20 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQ 99 (359)
T ss_pred hhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccc
Confidence 467999999999999999999875 5789999986532 222456889999999999999999999873 1
Q ss_pred ceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccc
Q 003384 531 VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGIS 610 (824)
Q Consensus 531 ~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla 610 (824)
..++||||+.+ +|.+.+. ..++...+..++.|++.||.|||+ +||+||||||+|||++.++.+||+|||++
T Consensus 100 ~~~lv~e~~~~-~l~~~~~-----~~~~~~~~~~~~~qi~~~L~~LH~---~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a 170 (359)
T cd07876 100 DVYLVMELMDA-NLCQVIH-----MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLA 170 (359)
T ss_pred eeEEEEeCCCc-CHHHHHh-----ccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEEecCCCc
Confidence 36899999975 5666552 247888899999999999999999 89999999999999999999999999998
Q ss_pred cccccccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhh----h--
Q 003384 611 RFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDT----G-- 684 (824)
Q Consensus 611 ~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~----~-- 684 (824)
+....... .....||+.|+|||++.+..++.++|||||||++|+|+||+.||...+........ +
T Consensus 171 ~~~~~~~~---------~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~ 241 (359)
T cd07876 171 RTACTNFM---------MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTP 241 (359)
T ss_pred cccccCcc---------CCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCC
Confidence 75432211 12346899999999999999999999999999999999999999754322110000 0
Q ss_pred ----------cccccc-------------------CCCCCCCChhhHHHHHHHHHHHhhhccCCCCChHH
Q 003384 685 ----------KLKNLL-------------------DPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 685 ----------~~~~~l-------------------d~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
...... .+.....+...+..+.+|+.+||..+|.+||++.+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e 311 (359)
T cd07876 242 SAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDE 311 (359)
T ss_pred cHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHH
Confidence 000000 00000111123457899999999999999999944
No 174
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=8.3e-35 Score=310.16 Aligned_cols=247 Identities=23% Similarity=0.364 Sum_probs=185.6
Q ss_pred eeeecCceEEEEEEECC----eEEEEEEecCCCCC-CchhHHHHHHHHHhcCCCceeeEecccC--CceEEEEEecCCCC
Q 003384 471 KIGEGGYGSIYKGLLRH----MQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYLPNGS 543 (824)
Q Consensus 471 ~LG~G~fG~Vykg~~~~----~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~Ey~~ggs 543 (824)
.||+|+||.||+|.+.+ ..+|+|.+...... ....+.+|+.++++++||||++++|+|. ...++||||+++|+
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~ 81 (269)
T cd05087 2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLGD 81 (269)
T ss_pred cccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCCc
Confidence 59999999999997643 56999988754322 2346889999999999999999999884 45789999999999
Q ss_pred hhhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccccCC
Q 003384 544 LEDRLSCKD--NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSN 621 (824)
Q Consensus 544 L~~~L~~~~--~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~~~ 621 (824)
|.+++.... ....+++..+..++.|++.||.|||+ ++++||||||+||+++.++++||+|||++..........
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~- 157 (269)
T cd05087 82 LKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHK---NNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYV- 157 (269)
T ss_pred HHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHH---CCEeccccCcceEEEcCCCcEEECCccccccccCcceee-
Confidence 999986432 23356777888999999999999999 899999999999999999999999999987543222111
Q ss_pred CccccccCCCCCCcccCChhhhccC-------CCCcchhHHhHHHHHHHHHh-CCCCCCCchHHHHHHh--hhccccccC
Q 003384 622 NTTLCCRTDPKGTFAYMDPEFLASG-------ELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALD--TGKLKNLLD 691 (824)
Q Consensus 622 ~~~~~~~~~~~GT~~Y~APE~l~~~-------~~t~ksDVwSlGvvL~ELlt-G~~Pf~~~~~~~~~~~--~~~~~~~ld 691 (824)
......|+..|+|||++.+. .++.++|||||||++|||++ |++||........... .+.....
T Consensus 158 -----~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~-- 230 (269)
T cd05087 158 -----TPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKL-- 230 (269)
T ss_pred -----cCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCC--
Confidence 11234578899999998642 35789999999999999996 9999975433221111 1111111
Q ss_pred CCCCCCChhhHHHHHHHHHHHhhhccCCCCChHHHHHHHH
Q 003384 692 PLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVL 731 (824)
Q Consensus 692 ~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~L 731 (824)
.........+..+.+++.+|+ .+|.+||++ ++|+..|
T Consensus 231 -~~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~-~~l~~~l 267 (269)
T cd05087 231 -PKPRLKLPLSDRWYEVMQFCW-LQPEQRPSA-EEVHLLL 267 (269)
T ss_pred -CCCccCCCCChHHHHHHHHHh-cCcccCCCH-HHHHHHh
Confidence 111122234567889999998 689999999 6666555
No 175
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=7e-35 Score=321.65 Aligned_cols=245 Identities=24% Similarity=0.267 Sum_probs=186.6
Q ss_pred CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCC---CCCchhHHHHHHHHHhcCCCceeeEecccC--CceEEEEE
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS---LQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYE 537 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~---~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~E 537 (824)
+|...++||+|+||.||++... +..||+|++.... ......+..|+.++..++||||+++++++. +..++|||
T Consensus 2 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (332)
T cd05623 2 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVMD 81 (332)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEEe
Confidence 6888899999999999999886 4679999986421 112335788999999999999999999884 46899999
Q ss_pred ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccccc
Q 003384 538 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNE 617 (824)
Q Consensus 538 y~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~ 617 (824)
|+++|+|.+++... ...+++..+..++.|++.||.|||+ ++|+||||||+|||++.++.+||+|||++..+....
T Consensus 82 y~~~g~L~~~l~~~--~~~l~~~~~~~~~~qi~~al~~lH~---~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~ 156 (332)
T cd05623 82 YYVGGDLLTLLSKF--EDRLPEDMARFYLAEMVIAIDSVHQ---LHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG 156 (332)
T ss_pred ccCCCcHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHEEECCCCCEEEeecchheecccCC
Confidence 99999999999532 3468899999999999999999999 899999999999999999999999999987543322
Q ss_pred ccCCCccccccCCCCCCcccCChhhhc-----cCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCC
Q 003384 618 ISSNNTTLCCRTDPKGTFAYMDPEFLA-----SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDP 692 (824)
Q Consensus 618 ~~~~~~~~~~~~~~~GT~~Y~APE~l~-----~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~ 692 (824)
.. ......||+.|+|||++. ...++.++|||||||+||||++|++||................. ..
T Consensus 157 ~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~--~~ 227 (332)
T cd05623 157 TV-------QSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKE--RF 227 (332)
T ss_pred cc-------eecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCc--cc
Confidence 11 012346999999999986 34688999999999999999999999976543322111100000 00
Q ss_pred CCCCCChhhHHHHHHHHHHHhhhccCC--CCCh
Q 003384 693 LAGDWPFVQAEQLANLAMRCCEMSRKS--RPEL 723 (824)
Q Consensus 693 ~~~~~p~~~~~~l~~Li~~Cl~~~P~~--RPt~ 723 (824)
.....+...+..+.+|+.+|+..++.. ||++
T Consensus 228 ~~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~ 260 (332)
T cd05623 228 QFPAQVTDVSEDAKDLIRRLICSREHRLGQNGI 260 (332)
T ss_pred cCCCccccCCHHHHHHHHHHccChhhhcCCCCH
Confidence 011112234678899999988654433 5676
No 176
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=5.2e-35 Score=308.82 Aligned_cols=242 Identities=26% Similarity=0.428 Sum_probs=196.4
Q ss_pred CCCccceeeecCceEEEEEEECCeEEEEEEecCCCCCCchhHHHHHHHHHhcCCCceeeEeccc-CCceEEEEEecCCCC
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC-PEVWTLVYEYLPNGS 543 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~-~~~~~LV~Ey~~ggs 543 (824)
+|...+.||+|+||.||+|...+..||+|.+.... ....+.+|+.+++.++||||+++++++ .+..++||||+++|+
T Consensus 7 ~~~~~~~lg~g~~g~v~~~~~~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~v~e~~~~~~ 84 (254)
T cd05083 7 KLTLGEIIGEGEFGAVLQGEYTGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILHNGLYIVMELMSKGN 84 (254)
T ss_pred HceeeeeeccCCCCceEecccCCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcCCCcEEEEECCCCCC
Confidence 47788899999999999999889999999986532 345789999999999999999999987 446789999999999
Q ss_pred hhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccccCCCc
Q 003384 544 LEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNT 623 (824)
Q Consensus 544 L~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~~~~~ 623 (824)
|.+++.... ...+++..++.++.+++.||.|||. +|++||||||+|||++.++.+||+|||++.......
T Consensus 85 L~~~l~~~~-~~~~~~~~~~~~~~qi~~al~~lH~---~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~------ 154 (254)
T cd05083 85 LVNFLRTRG-RALVSVIQLLQFSLDVAEGMEYLES---KKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGV------ 154 (254)
T ss_pred HHHHHHhcC-cCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccccCcceEEEcCCCcEEECCCccceeccccC------
Confidence 999986432 3458899999999999999999999 899999999999999999999999999987543211
Q ss_pred cccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHh-CCCCCCCchHHH--HHHhhhccccccCCCCCCCChh
Q 003384 624 TLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQ--YALDTGKLKNLLDPLAGDWPFV 700 (824)
Q Consensus 624 ~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELlt-G~~Pf~~~~~~~--~~~~~~~~~~~ld~~~~~~p~~ 700 (824)
.....+..|+|||++.++.++.++|||||||++|+|++ |++||....... .....+ .....+..
T Consensus 155 -----~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~--------~~~~~~~~ 221 (254)
T cd05083 155 -----DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKG--------YRMEPPEG 221 (254)
T ss_pred -----CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCC--------CCCCCCCc
Confidence 11234678999999988899999999999999999998 999996554322 111111 01112334
Q ss_pred hHHHHHHHHHHHhhhccCCCCChHHHHHHHHH
Q 003384 701 QAEQLANLAMRCCEMSRKSRPELGKDVWRVLE 732 (824)
Q Consensus 701 ~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le 732 (824)
.+..+.+++.+||+.+|..||++ +++...|+
T Consensus 222 ~~~~~~~li~~~l~~~p~~Rp~~-~~l~~~l~ 252 (254)
T cd05083 222 CPADVYVLMTSCWETEPKKRPSF-HKLREKLE 252 (254)
T ss_pred CCHHHHHHHHHHcCCChhhCcCH-HHHHHHHc
Confidence 56789999999999999999999 56655553
No 177
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.5e-35 Score=334.69 Aligned_cols=189 Identities=24% Similarity=0.313 Sum_probs=161.1
Q ss_pred CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCCchhHHHHHHHHHhcCCCceeeEeccc--CCceEEEEEec
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYL 539 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~--~~~~~LV~Ey~ 539 (824)
..|...+.||+|+||.||++... +..||||... ...+.+|+.+|+.++||||++++++| ....++||||+
T Consensus 92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~ 165 (391)
T PHA03212 92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRY 165 (391)
T ss_pred CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecC
Confidence 46899999999999999999875 5789999753 23578999999999999999999987 45678999999
Q ss_pred CCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccccccc
Q 003384 540 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEIS 619 (824)
Q Consensus 540 ~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~ 619 (824)
. ++|..++.. ...+++..++.|+.|++.||.|||+ ++||||||||+|||++.++.+||+|||+++........
T Consensus 166 ~-~~L~~~l~~---~~~l~~~~~~~i~~qi~~aL~ylH~---~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~ 238 (391)
T PHA03212 166 K-TDLYCYLAA---KRNIAICDILAIERSVLRAIQYLHE---NRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINAN 238 (391)
T ss_pred C-CCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChHhEEEcCCCCEEEEeCCccccccccccc
Confidence 5 688888743 3468899999999999999999999 89999999999999999999999999999754322111
Q ss_pred CCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCC
Q 003384 620 SNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALG 672 (824)
Q Consensus 620 ~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~ 672 (824)
......||+.|+|||++.+..++.++|||||||+||||+||++||.
T Consensus 239 -------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~ 284 (391)
T PHA03212 239 -------KYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLF 284 (391)
T ss_pred -------ccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcC
Confidence 0123469999999999999999999999999999999999997763
No 178
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=6.4e-35 Score=317.54 Aligned_cols=252 Identities=24% Similarity=0.410 Sum_probs=198.7
Q ss_pred cCCCCccceeeecCceEEEEEEEC-------CeEEEEEEecCCCCC-CchhHHHHHHHHHhc-CCCceeeEecccC--Cc
Q 003384 463 THNFDPSLKIGEGGYGSIYKGLLR-------HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKI-RHPNLVTLVGACP--EV 531 (824)
Q Consensus 463 ~~~f~~~~~LG~G~fG~Vykg~~~-------~~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l-~HpnIv~L~g~~~--~~ 531 (824)
.++|...+.||+|+||.||+|... +..||||++...... ....+.+|+.+++++ +||||++++++|. +.
T Consensus 34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 113 (302)
T cd05055 34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGP 113 (302)
T ss_pred HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCc
Confidence 346888999999999999999752 247999998754322 234688999999999 7999999999884 46
Q ss_pred eEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccc
Q 003384 532 WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISR 611 (824)
Q Consensus 532 ~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~ 611 (824)
.++||||+++|+|.+++.... ...+++.++..++.+++.||.|||+ ++|+|+||||+|||++.++.+||+|||+++
T Consensus 114 ~~lv~e~~~~~~L~~~i~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~ 189 (302)
T cd05055 114 ILVITEYCCYGDLLNFLRRKR-ESFLTLEDLLSFSYQVAKGMAFLAS---KNCIHRDLAARNVLLTHGKIVKICDFGLAR 189 (302)
T ss_pred eEEEEEcCCCCcHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHH---CCeehhhhccceEEEcCCCeEEECCCcccc
Confidence 889999999999999985432 2348999999999999999999999 899999999999999999999999999998
Q ss_pred ccccccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHh-CCCCCCCchHHH---HHHhhhccc
Q 003384 612 FLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQ---YALDTGKLK 687 (824)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELlt-G~~Pf~~~~~~~---~~~~~~~~~ 687 (824)
.+...... .......++..|+|||.+.+..++.++|||||||++|+|+| |.+||....... .....+
T Consensus 190 ~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~~~--- 260 (302)
T cd05055 190 DIMNDSNY------VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKEG--- 260 (302)
T ss_pred cccCCCce------eecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHHcC---
Confidence 65433211 01123346789999999999899999999999999999998 999986543211 111111
Q ss_pred cccCCCCCCCChhhHHHHHHHHHHHhhhccCCCCChHHHHHHHHHH
Q 003384 688 NLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEP 733 (824)
Q Consensus 688 ~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le~ 733 (824)
.....+...+..+.+++.+||+.+|++||++ .+++..|+.
T Consensus 261 -----~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~-~ell~~l~~ 300 (302)
T cd05055 261 -----YRMAQPEHAPAEIYDIMKTCWDADPLKRPTF-KQIVQLIGK 300 (302)
T ss_pred -----CcCCCCCCCCHHHHHHHHHHcCCCchhCcCH-HHHHHHHHh
Confidence 0111223345789999999999999999999 677777664
No 179
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=8.8e-35 Score=311.79 Aligned_cols=248 Identities=26% Similarity=0.352 Sum_probs=191.1
Q ss_pred CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCC--CchhHHHHHHHHHhcCCCceeeEecccC--CceEEEEEe
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEY 538 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~--~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~Ey 538 (824)
+|...+.||.|+||.||+|... +..||||.+...... ....+.+|+.+++.++||||+++++++. ...++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence 4677889999999999999875 578999998654322 2356889999999999999999999984 568899999
Q ss_pred cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccc
Q 003384 539 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEI 618 (824)
Q Consensus 539 ~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~ 618 (824)
+. ++|.+++........+++..+..++.|++.||.|||. ++|+||||||+|||++.++.+||+|||++........
T Consensus 81 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 156 (285)
T cd07861 81 LS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHS---RRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVR 156 (285)
T ss_pred CC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCCHHHEEEcCCCcEEECcccceeecCCCcc
Confidence 97 6888887554444678999999999999999999999 8999999999999999999999999999875432211
Q ss_pred cCCCccccccCCCCCCcccCChhhhccC-CCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhc------------
Q 003384 619 SSNNTTLCCRTDPKGTFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGK------------ 685 (824)
Q Consensus 619 ~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~------------ 685 (824)
......|++.|+|||++.+. .++.++|||||||++|+|+||++||..............
T Consensus 157 --------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (285)
T cd07861 157 --------VYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPG 228 (285)
T ss_pred --------cccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhc
Confidence 01234578999999998754 578899999999999999999999976543322111000
Q ss_pred ------ccccc----CCCCCCCChhhHHHHHHHHHHHhhhccCCCCChH
Q 003384 686 ------LKNLL----DPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELG 724 (824)
Q Consensus 686 ------~~~~l----d~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~ 724 (824)
..... ...........+.++.+++.+||+.+|.+||++.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ 277 (285)
T cd07861 229 VTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAK 277 (285)
T ss_pred chhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHH
Confidence 00000 0000001122456788999999999999999994
No 180
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=5.7e-35 Score=311.06 Aligned_cols=233 Identities=26% Similarity=0.412 Sum_probs=181.9
Q ss_pred eeeecCceEEEEEEEC--------------CeEEEEEEecCCCCCCchhHHHHHHHHHhcCCCceeeEecccC--CceEE
Q 003384 471 KIGEGGYGSIYKGLLR--------------HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTL 534 (824)
Q Consensus 471 ~LG~G~fG~Vykg~~~--------------~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~L 534 (824)
.||+|+||.||+|... ...|++|.+..........|..|+.+++.++||||++++|+|. ...++
T Consensus 2 ~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~l 81 (262)
T cd05077 2 HLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENIM 81 (262)
T ss_pred ccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCEE
Confidence 5899999999999753 1358999887654444457889999999999999999999884 45789
Q ss_pred EEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCc-------ceeecc
Q 003384 535 VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFV-------SKLSDF 607 (824)
Q Consensus 535 V~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~-------vKL~DF 607 (824)
||||+++|+|..++... ..++++..++.++.||+.||.|||+ ++|+||||||.|||++.++. +|++||
T Consensus 82 v~e~~~~~~l~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~ 156 (262)
T cd05077 82 VEEFVEFGPLDLFMHRK--SDVLTTPWKFKVAKQLASALSYLED---KDLVHGNVCTKNILLAREGIDGECGPFIKLSDP 156 (262)
T ss_pred EEecccCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHhhh---CCeECCCCCcccEEEecCCccCCCCceeEeCCC
Confidence 99999999998887532 3468999999999999999999999 89999999999999987664 899999
Q ss_pred ccccccccccccCCCccccccCCCCCCcccCChhhhc-cCCCCcchhHHhHHHHHHHHH-hCCCCCCCchHHHHH-Hhhh
Q 003384 608 GISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLA-SGELTPKSDVYSFGIILLRLL-TGRPALGITKEVQYA-LDTG 684 (824)
Q Consensus 608 Gla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~-~~~~t~ksDVwSlGvvL~ELl-tG~~Pf~~~~~~~~~-~~~~ 684 (824)
|++...... ....|+..|+|||++. +..++.++|||||||+||+|+ +|..||......... ...+
T Consensus 157 g~~~~~~~~------------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~ 224 (262)
T cd05077 157 GIPITVLSR------------QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKERFYEG 224 (262)
T ss_pred CCCccccCc------------ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHHHHHhc
Confidence 998654321 1234788999999987 467899999999999999998 588888654322111 0111
Q ss_pred ccccccCCCCCCCChhhHHHHHHHHHHHhhhccCCCCChHHHHHHH
Q 003384 685 KLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRV 730 (824)
Q Consensus 685 ~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~ 730 (824)
.. . ........+.+|+.+||+.+|.+||++ .++++.
T Consensus 225 ~~-----~----~~~~~~~~~~~li~~cl~~dp~~Rp~~-~~il~~ 260 (262)
T cd05077 225 QC-----M----LVTPSCKELADLMTHCMNYDPNQRPFF-RAIMRD 260 (262)
T ss_pred Cc-----c----CCCCChHHHHHHHHHHcCCChhhCcCH-HHHHHh
Confidence 00 0 111234678999999999999999999 555443
No 181
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=6.1e-35 Score=311.58 Aligned_cols=245 Identities=28% Similarity=0.470 Sum_probs=189.2
Q ss_pred eeeecCceEEEEEEECC----eEEEEEEecCCC-CCCchhHHHHHHHHHhc-CCCceeeEecccC--CceEEEEEecCCC
Q 003384 471 KIGEGGYGSIYKGLLRH----MQVAIKMLHPHS-LQGPSEFQQEIDILSKI-RHPNLVTLVGACP--EVWTLVYEYLPNG 542 (824)
Q Consensus 471 ~LG~G~fG~Vykg~~~~----~~VAvK~l~~~~-~~~~~~f~~Ei~iL~~l-~HpnIv~L~g~~~--~~~~LV~Ey~~gg 542 (824)
.||+|+||.||+|.+.+ ..+++|.+.... ......+.+|+.++.++ +||||++++++|. ...++||||+++|
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 81 (270)
T cd05047 2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHG 81 (270)
T ss_pred cCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCCC
Confidence 58999999999998753 357888886432 22335688999999999 7999999999984 3578999999999
Q ss_pred ChhhhhhccC-------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccc
Q 003384 543 SLEDRLSCKD-------------NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGI 609 (824)
Q Consensus 543 sL~~~L~~~~-------------~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGl 609 (824)
+|.+++.... ....+++..+..++.+++.||.|||+ ++++||||||+|||++.++.+||+|||+
T Consensus 82 ~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~---~~i~H~dikp~nili~~~~~~kl~dfgl 158 (270)
T cd05047 82 NLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGL 158 (270)
T ss_pred cHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccccceEEEcCCCeEEECCCCC
Confidence 9999985432 12358899999999999999999999 8999999999999999999999999999
Q ss_pred ccccccccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHh-CCCCCCCchHHHHHHhhhcccc
Q 003384 610 SRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKN 688 (824)
Q Consensus 610 a~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELlt-G~~Pf~~~~~~~~~~~~~~~~~ 688 (824)
+....... . ......+..|+|||++....++.++|||||||++|||+| |.+||......... ..
T Consensus 159 ~~~~~~~~--~-------~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~-~~----- 223 (270)
T cd05047 159 SRGQEVYV--K-------KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELY-EK----- 223 (270)
T ss_pred ccccchhh--h-------ccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHH-HH-----
Confidence 86322110 0 011234678999999988889999999999999999997 99999654322111 10
Q ss_pred ccCCCCCCCChhhHHHHHHHHHHHhhhccCCCCChHHHHHHHHHHH
Q 003384 689 LLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM 734 (824)
Q Consensus 689 ~ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le~l 734 (824)
.........+...+..+.+++.+|+..+|.+||++ .+++..|..+
T Consensus 224 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~-~~il~~l~~~ 268 (270)
T cd05047 224 LPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSF-AQILVSLNRM 268 (270)
T ss_pred HhCCCCCCCCCcCCHHHHHHHHHHcccChhhCCCH-HHHHHHHHHh
Confidence 00111111233445689999999999999999999 6676776654
No 182
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=8.6e-35 Score=312.65 Aligned_cols=247 Identities=27% Similarity=0.378 Sum_probs=187.9
Q ss_pred CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCC--chhHHHHHHHHHhc---CCCceeeEecccC-------C
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG--PSEFQQEIDILSKI---RHPNLVTLVGACP-------E 530 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~--~~~f~~Ei~iL~~l---~HpnIv~L~g~~~-------~ 530 (824)
+|...+.||+|+||.||+|... +..||+|.+....... ...+.+|+.+++.+ +||||+++++++. .
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 4778889999999999999875 5789999987543222 23567788888766 6999999999873 2
Q ss_pred ceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccc
Q 003384 531 VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGIS 610 (824)
Q Consensus 531 ~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla 610 (824)
..++||||+++ +|.+++... ....+++..+..++.|++.||.|||+ +||+||||||+|||++.++.+||+|||++
T Consensus 81 ~~~lv~e~~~~-~l~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dikp~Nili~~~~~~kl~dfg~~ 155 (288)
T cd07863 81 KVTLVFEHVDQ-DLRTYLDKV-PPPGLPAETIKDLMRQFLRGLDFLHA---NCIVHRDLKPENILVTSGGQVKLADFGLA 155 (288)
T ss_pred eEEEEEccccc-CHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEECccCcc
Confidence 36899999974 888887533 23458999999999999999999999 89999999999999999999999999999
Q ss_pred cccccccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhc-----
Q 003384 611 RFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGK----- 685 (824)
Q Consensus 611 ~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~----- 685 (824)
........ .....||+.|+|||++.+..++.++|||||||++|+|++|++||..............
T Consensus 156 ~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~ 226 (288)
T cd07863 156 RIYSCQMA---------LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLP 226 (288)
T ss_pred ccccCccc---------CCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCC
Confidence 86543211 1234589999999999988999999999999999999999999975543221111000
Q ss_pred ----ccc-------ccCCCC----CCCChhhHHHHHHHHHHHhhhccCCCCChHH
Q 003384 686 ----LKN-------LLDPLA----GDWPFVQAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 686 ----~~~-------~ld~~~----~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
+.. .+.+.. .......+..+.+++.+||+.+|.+||++.+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~ 281 (288)
T cd07863 227 PEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFR 281 (288)
T ss_pred ChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHH
Confidence 000 000000 0011123567899999999999999999843
No 183
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-35 Score=326.81 Aligned_cols=249 Identities=27% Similarity=0.472 Sum_probs=205.4
Q ss_pred ccceeeecCceEEEEEEECC------eEEEEEEecCCCC-CCchhHHHHHHHHHhcCCCceeeEecccCC-ceEEEEEec
Q 003384 468 PSLKIGEGGYGSIYKGLLRH------MQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGACPE-VWTLVYEYL 539 (824)
Q Consensus 468 ~~~~LG~G~fG~Vykg~~~~------~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~~-~~~LV~Ey~ 539 (824)
+.++||.|-||.||+|++.. -.||||..+.+.. .+.+.|..|.-+|++++|||||+|+|+|.+ ..+||||++
T Consensus 393 l~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~P~WivmEL~ 472 (974)
T KOG4257|consen 393 LKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQPMWIVMELA 472 (974)
T ss_pred HHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeeccceeEEEecc
Confidence 45679999999999999863 2599999887543 345679999999999999999999999965 578999999
Q ss_pred CCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccccccc
Q 003384 540 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEIS 619 (824)
Q Consensus 540 ~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~ 619 (824)
+-|.|..+|... ...|+..+...++.||+.||.|||+ ..+|||||...|||+.....+||+||||++.+......
T Consensus 473 ~~GELr~yLq~n--k~sL~l~tL~ly~~Qi~talaYLeS---krfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~yY 547 (974)
T KOG4257|consen 473 PLGELREYLQQN--KDSLPLRTLTLYCYQICTALAYLES---KRFVHRDIAARNILVSSPQCVKLADFGLSRYLEDDAYY 547 (974)
T ss_pred cchhHHHHHHhc--cccchHHHHHHHHHHHHHHHHHHHh---hchhhhhhhhhheeecCcceeeecccchhhhccccchh
Confidence 999999999644 4568888999999999999999999 88999999999999999999999999999988766543
Q ss_pred CCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHh-CCCCCCCchHHHHHHhhhccccccCCCCCCCC
Q 003384 620 SNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWP 698 (824)
Q Consensus 620 ~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELlt-G~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p 698 (824)
.. +...-.+-|||||-+.-..++.++|||-|||++||++. |..||.+..... -+..+-.....+.|
T Consensus 548 ka-------S~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsD------VI~~iEnGeRlP~P 614 (974)
T KOG4257|consen 548 KA-------SRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSD------VIGHIENGERLPCP 614 (974)
T ss_pred hc-------cccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccc------eEEEecCCCCCCCC
Confidence 22 22334678999999999999999999999999999986 999996543211 11112223445678
Q ss_pred hhhHHHHHHHHHHHhhhccCCCCChHHHHHHHHHHHH
Q 003384 699 FVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMR 735 (824)
Q Consensus 699 ~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le~l~ 735 (824)
..+++.|..|..+||.++|.+||.+ .++...|..+.
T Consensus 615 ~nCPp~LYslmskcWayeP~kRPrf-tei~~~lsdv~ 650 (974)
T KOG4257|consen 615 PNCPPALYSLMSKCWAYEPSKRPRF-TEIKAILSDVL 650 (974)
T ss_pred CCCChHHHHHHHHHhccCcccCCcH-HHHHHHHHHHH
Confidence 8899999999999999999999999 55666665543
No 184
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=3.6e-35 Score=312.73 Aligned_cols=254 Identities=25% Similarity=0.419 Sum_probs=196.3
Q ss_pred CCCccceeeecCceEEEEEEECC-----eEEEEEEecCCC-CCCchhHHHHHHHHHhcCCCceeeEecccC--CceEEEE
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLRH-----MQVAIKMLHPHS-LQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVY 536 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~~-----~~VAvK~l~~~~-~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~ 536 (824)
.|...+.||+|+||.||+|.+.. ..||||.+.... ......|..|+.+++.++||||+++++++. ...++||
T Consensus 5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 84 (269)
T cd05065 5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIIT 84 (269)
T ss_pred HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEE
Confidence 46778899999999999998752 369999987542 222457899999999999999999999884 3578999
Q ss_pred EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccc
Q 003384 537 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQN 616 (824)
Q Consensus 537 Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~ 616 (824)
||+++|+|.+++... ...+++..++.++.+++.||.|||+ +|++||||||+|||++.++.+||+|||++......
T Consensus 85 e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~~l~~al~~lH~---~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~ 159 (269)
T cd05065 85 EFMENGALDSFLRQN--DGQFTVIQLVGMLRGIAAGMKYLSE---MNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDD 159 (269)
T ss_pred ecCCCCcHHHHHhhC--CCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccChheEEEcCCCcEEECCCccccccccC
Confidence 999999999998543 3468999999999999999999999 89999999999999999999999999998865433
Q ss_pred cccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHh-CCCCCCCchHHHHHHhhhccccccCCCCC
Q 003384 617 EISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAG 695 (824)
Q Consensus 617 ~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELlt-G~~Pf~~~~~~~~~~~~~~~~~~ld~~~~ 695 (824)
....... ......++..|+|||++.+..++.++|||||||++|||++ |.+||............. .. ...
T Consensus 160 ~~~~~~~---~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~---~~---~~~ 230 (269)
T cd05065 160 TSDPTYT---SSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIE---QD---YRL 230 (269)
T ss_pred ccccccc---cccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHH---cC---CcC
Confidence 2111100 0011123568999999998999999999999999999886 999996543322111110 00 111
Q ss_pred CCChhhHHHHHHHHHHHhhhccCCCCChHHHHHHHHHH
Q 003384 696 DWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEP 733 (824)
Q Consensus 696 ~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le~ 733 (824)
..+...+..+.+++.+||+.+|.+||++ ..+...|+.
T Consensus 231 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~-~~i~~~l~~ 267 (269)
T cd05065 231 PPPMDCPTALHQLMLDCWQKDRNARPKF-GQIVSTLDK 267 (269)
T ss_pred CCcccCCHHHHHHHHHHcCCChhhCcCH-HHHHHHHHh
Confidence 2233456789999999999999999999 667666654
No 185
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=4.1e-35 Score=316.08 Aligned_cols=241 Identities=24% Similarity=0.315 Sum_probs=191.7
Q ss_pred CCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCC---CchhHHHHHHHHHhcCCCceeeEeccc--CCceEEEEEe
Q 003384 466 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ---GPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEY 538 (824)
Q Consensus 466 f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~---~~~~f~~Ei~iL~~l~HpnIv~L~g~~--~~~~~LV~Ey 538 (824)
|...+.||.|+||+||+|.+. ++.||+|.+...... ....+.+|+.+|+.++|+||+.+++++ .+..++||||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence 566788999999999999885 578999998654322 223578899999999999999999877 4468899999
Q ss_pred cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccc
Q 003384 539 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEI 618 (824)
Q Consensus 539 ~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~ 618 (824)
+++|+|.+++.... ...+++..+..++.|++.||.|||+ ++|+||||||+|||++.++.+||+|||++........
T Consensus 82 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~ql~~~l~~lH~---~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~ 157 (285)
T cd05632 82 MNGGDLKFHIYNMG-NPGFEEERALFYAAEILCGLEDLHR---ENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGES 157 (285)
T ss_pred ccCccHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCCHHHEEECCCCCEEEecCCcceecCCCCc
Confidence 99999998885332 3469999999999999999999999 8999999999999999999999999999875432211
Q ss_pred cCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHh-hhccccccCCCCCCC
Q 003384 619 SSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALD-TGKLKNLLDPLAGDW 697 (824)
Q Consensus 619 ~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~-~~~~~~~ld~~~~~~ 697 (824)
.....|+..|+|||++.+..++.++|||||||++|+|+||.+||........... ...... ....+
T Consensus 158 ---------~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~----~~~~~ 224 (285)
T cd05632 158 ---------IRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLE----TEEVY 224 (285)
T ss_pred ---------ccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhc----ccccc
Confidence 0234589999999999988999999999999999999999999975543211111 111111 11122
Q ss_pred ChhhHHHHHHHHHHHhhhccCCCCCh
Q 003384 698 PFVQAEQLANLAMRCCEMSRKSRPEL 723 (824)
Q Consensus 698 p~~~~~~l~~Li~~Cl~~~P~~RPt~ 723 (824)
+...+..+.+|+..|++.+|.+||+.
T Consensus 225 ~~~~~~~~~~li~~~l~~~P~~R~~~ 250 (285)
T cd05632 225 SAKFSEEAKSICKMLLTKDPKQRLGC 250 (285)
T ss_pred CccCCHHHHHHHHHHccCCHhHcCCC
Confidence 33445678999999999999999995
No 186
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=6.2e-35 Score=315.98 Aligned_cols=259 Identities=27% Similarity=0.447 Sum_probs=195.8
Q ss_pred CCCCccceeeecCceEEEEEEEC------------------CeEEEEEEecCCCCC-CchhHHHHHHHHHhcCCCceeeE
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLLR------------------HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTL 524 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~~------------------~~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIv~L 524 (824)
++|+..+.||+|+||.||++.+. ...||+|++...... ....|.+|+.+++.++||||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~ 84 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL 84 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence 46888899999999999998532 235899998754322 23578999999999999999999
Q ss_pred eccc--CCceEEEEEecCCCChhhhhhccCC--------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcE
Q 003384 525 VGAC--PEVWTLVYEYLPNGSLEDRLSCKDN--------SPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANI 594 (824)
Q Consensus 525 ~g~~--~~~~~LV~Ey~~ggsL~~~L~~~~~--------~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NI 594 (824)
++++ .+..++||||+++|+|.+++..... ...+++..+..++.+++.||.|||+ ++++||||||+||
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~---~~i~H~dlkp~Ni 161 (296)
T cd05095 85 LAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSS---LNFVHRDLATRNC 161 (296)
T ss_pred EEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHH---CCeecccCChheE
Confidence 9987 3568899999999999999864321 1347788999999999999999999 8999999999999
Q ss_pred EecCCCcceeeccccccccccccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHh--CCCCCC
Q 003384 595 LLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT--GRPALG 672 (824)
Q Consensus 595 Lld~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELlt--G~~Pf~ 672 (824)
|++.++.+||+|||+++.+....... ......+++.|+|||...++.++.++|||||||++|||+| |..||.
T Consensus 162 li~~~~~~~l~dfg~~~~~~~~~~~~------~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~ 235 (296)
T cd05095 162 LVGKNYTIKIADFGMSRNLYSGDYYR------IQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYS 235 (296)
T ss_pred EEcCCCCEEeccCcccccccCCccee------ccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCcc
Confidence 99999999999999998654322110 0122345788999999888899999999999999999998 778886
Q ss_pred CchHHHHHHhhhccc-cccCCCCCCCChhhHHHHHHHHHHHhhhccCCCCChHHHHHHHHH
Q 003384 673 ITKEVQYALDTGKLK-NLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLE 732 (824)
Q Consensus 673 ~~~~~~~~~~~~~~~-~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le 732 (824)
...........+... ..........+...+..+.+|+.+||+.+|.+||++ .+|.+.|.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~-~~i~~~l~ 295 (296)
T cd05095 236 QLSDEQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSF-QEIHATLL 295 (296)
T ss_pred ccChHHHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCH-HHHHHHHh
Confidence 443222111111110 000001111223345789999999999999999999 66666654
No 187
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=4.6e-35 Score=315.25 Aligned_cols=252 Identities=27% Similarity=0.497 Sum_probs=197.1
Q ss_pred cCCCCccceeeecCceEEEEEEEC-------CeEEEEEEecCCCC-CCchhHHHHHHHHHhcCCCceeeEecccC--Cce
Q 003384 463 THNFDPSLKIGEGGYGSIYKGLLR-------HMQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVW 532 (824)
Q Consensus 463 ~~~f~~~~~LG~G~fG~Vykg~~~-------~~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~ 532 (824)
.++|.....||+|+||.||+|... +..||+|++..... .....|.+|+.+++.++||||++++++|. +..
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~ 83 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPM 83 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCcc
Confidence 356888899999999999999763 46799999875422 12356889999999999999999999884 467
Q ss_pred EEEEEecCCCChhhhhhccC-------------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCc
Q 003384 533 TLVYEYLPNGSLEDRLSCKD-------------------NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPAN 593 (824)
Q Consensus 533 ~LV~Ey~~ggsL~~~L~~~~-------------------~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~N 593 (824)
++||||+++|+|.+++.... ....+++..++.++.+++.||.|||. ++++||||||+|
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~---~~i~H~dl~p~n 160 (288)
T cd05050 84 CLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSE---RKFVHRDLATRN 160 (288)
T ss_pred EEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHh---CCeecccccHhh
Confidence 99999999999999985321 12357889999999999999999999 899999999999
Q ss_pred EEecCCCcceeeccccccccccccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHh-CCCCCC
Q 003384 594 ILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALG 672 (824)
Q Consensus 594 ILld~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELlt-G~~Pf~ 672 (824)
||++.++.+||+|||++..+........ .....++..|+|||.+.+..++.++|||||||++|+|++ |..||.
T Consensus 161 il~~~~~~~~l~dfg~~~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~ 234 (288)
T cd05050 161 CLVGENMVVKIADFGLSRNIYSADYYKA------SENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYY 234 (288)
T ss_pred eEecCCCceEECccccceecccCccccc------cCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCC
Confidence 9999999999999999875533221110 012235678999999988899999999999999999998 888885
Q ss_pred CchHHH--HHHhhhccccccCCCCCCCChhhHHHHHHHHHHHhhhccCCCCChHHHHHHHHH
Q 003384 673 ITKEVQ--YALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLE 732 (824)
Q Consensus 673 ~~~~~~--~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le 732 (824)
...... ..+..+.. ...+...+..+.+|+.+||+.+|.+||++ .++...|+
T Consensus 235 ~~~~~~~~~~~~~~~~--------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~-~el~~~l~ 287 (288)
T cd05050 235 GMAHEEVIYYVRDGNV--------LSCPDNCPLELYNLMRLCWSKLPSDRPSF-ASINRILQ 287 (288)
T ss_pred CCCHHHHHHHHhcCCC--------CCCCCCCCHHHHHHHHHHcccCcccCCCH-HHHHHHhh
Confidence 432221 11112111 11233456789999999999999999999 66766664
No 188
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=1e-34 Score=320.22 Aligned_cols=245 Identities=24% Similarity=0.276 Sum_probs=186.3
Q ss_pred CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCC---CCCchhHHHHHHHHHhcCCCceeeEecccC--CceEEEEE
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS---LQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYE 537 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~---~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~E 537 (824)
+|...+.||+|+||.||++... +..||||++.... ......+.+|+.++..++||||++++++|. +..++|||
T Consensus 2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (331)
T cd05597 2 DFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVMD 81 (331)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEEe
Confidence 6888899999999999999875 5789999986421 122345889999999999999999999884 46899999
Q ss_pred ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccccc
Q 003384 538 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNE 617 (824)
Q Consensus 538 y~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~ 617 (824)
|++||+|.+++... ...++...+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||++..+....
T Consensus 82 ~~~g~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 156 (331)
T cd05597 82 YYVGGDLLTLLSKF--EDRLPEDMARFYLAEMVLAIDSVHQ---LGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADG 156 (331)
T ss_pred cCCCCcHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEECCCCHHHEEECCCCCEEEEECCceeecCCCC
Confidence 99999999998532 3458889999999999999999999 899999999999999999999999999987654322
Q ss_pred ccCCCccccccCCCCCCcccCChhhhcc-----CCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCC
Q 003384 618 ISSNNTTLCCRTDPKGTFAYMDPEFLAS-----GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDP 692 (824)
Q Consensus 618 ~~~~~~~~~~~~~~~GT~~Y~APE~l~~-----~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~ 692 (824)
... .....||+.|+|||++.. +.++.++|||||||++|+|++|+.||..................+.
T Consensus 157 ~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~- 228 (331)
T cd05597 157 TVQ-------SNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQ- 228 (331)
T ss_pred Ccc-------ccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCccc-
Confidence 110 122358999999999863 4578899999999999999999999976543222111100011111
Q ss_pred CCCCCChhhHHHHHHHHHHHhhhcc--CCCCCh
Q 003384 693 LAGDWPFVQAEQLANLAMRCCEMSR--KSRPEL 723 (824)
Q Consensus 693 ~~~~~p~~~~~~l~~Li~~Cl~~~P--~~RPt~ 723 (824)
.. ......+..+.+++.+|+...+ ..||++
T Consensus 229 ~~-~~~~~~~~~~~~li~~ll~~~~~r~~r~~~ 260 (331)
T cd05597 229 FP-PDVTDVSEEAKDLIRRLICSPETRLGRNGL 260 (331)
T ss_pred CC-CccCCCCHHHHHHHHHHccCcccccCCCCH
Confidence 01 1112246688999999876433 336777
No 189
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=5.4e-35 Score=314.37 Aligned_cols=260 Identities=25% Similarity=0.416 Sum_probs=196.9
Q ss_pred CCCCccceeeecCceEEEEEEEC------CeEEEEEEecCCC-CCCchhHHHHHHHHHhcCCCceeeEecccC----Cce
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLLR------HMQVAIKMLHPHS-LQGPSEFQQEIDILSKIRHPNLVTLVGACP----EVW 532 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~~------~~~VAvK~l~~~~-~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~----~~~ 532 (824)
..|...+.||+|+||.||.+.+. +..||+|.+.... ......+.+|+.+++.++||||+++++++. ...
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 83 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCce
Confidence 35678889999999999998752 4679999987543 222457899999999999999999999884 347
Q ss_pred EEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccc
Q 003384 533 TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRF 612 (824)
Q Consensus 533 ~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~ 612 (824)
++||||++|++|.+++... ...+++..+..++.+++.||.|||+ +|++||||||+|||++.++.+||+|||++..
T Consensus 84 ~lv~e~~~g~~L~~~l~~~--~~~~~~~~~~~i~~~i~~aL~~lH~---~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~ 158 (284)
T cd05079 84 KLIMEFLPSGSLKEYLPRN--KNKINLKQQLKYAVQICKGMDYLGS---RQYVHRDLAARNVLVESEHQVKIGDFGLTKA 158 (284)
T ss_pred EEEEEccCCCCHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecccchheEEEcCCCCEEECCCccccc
Confidence 8999999999999998532 2358999999999999999999999 8999999999999999999999999999986
Q ss_pred cccccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHH-HHHh--------h
Q 003384 613 LSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQ-YALD--------T 683 (824)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~-~~~~--------~ 683 (824)
+........ ......|+..|+|||++.+..++.++|||||||++|+|+||+.|+....... .... .
T Consensus 159 ~~~~~~~~~-----~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (284)
T cd05079 159 IETDKEYYT-----VKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVT 233 (284)
T ss_pred cccCcccee-----ecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHH
Confidence 643321100 1123457788999999988889999999999999999999887653211100 0000 0
Q ss_pred hccccccCCCCCCCChhhHHHHHHHHHHHhhhccCCCCChHHHHHHHHHHH
Q 003384 684 GKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM 734 (824)
Q Consensus 684 ~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le~l 734 (824)
..............+...+..+.+|+.+||+.+|.+||++ ++++..|+.+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~-~~il~~l~~~ 283 (284)
T cd05079 234 RLVRVLEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTF-QNLIEGFEAI 283 (284)
T ss_pred HHHHHHHcCccCCCCCCCCHHHHHHHHHHccCCcccCcCH-HHHHHHHHhh
Confidence 0000000011111233456789999999999999999999 6777766643
No 190
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=3.9e-35 Score=311.79 Aligned_cols=245 Identities=27% Similarity=0.353 Sum_probs=192.1
Q ss_pred CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCCchhHHHHHHHHHhcCCCceeeEeccc--CCceEEEEEec
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYL 539 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~--~~~~~LV~Ey~ 539 (824)
.+|...+.||+|+||.||+|... +..||+|.+..........+.+|+.+++.++||||+++++++ .+..++||||+
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~ 88 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFC 88 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEecc
Confidence 36777888999999999999874 578999998765444445688999999999999999999987 45688999999
Q ss_pred CCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccccccc
Q 003384 540 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEIS 619 (824)
Q Consensus 540 ~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~ 619 (824)
++++|.+++.. ...+++.....++.+++.||.|||. +|++|+||||+||+++.++.+||+|||++........
T Consensus 89 ~~~~L~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~- 161 (267)
T cd06645 89 GGGSLQDIYHV---TGPLSESQIAYVSRETLQGLYYLHS---KGKMHRDIKGANILLTDNGHVKLADFGVSAQITATIA- 161 (267)
T ss_pred CCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEECcceeeeEccCccc-
Confidence 99999998843 3468999999999999999999999 8999999999999999999999999999876532211
Q ss_pred CCCccccccCCCCCCcccCChhhhc---cCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCCC
Q 003384 620 SNNTTLCCRTDPKGTFAYMDPEFLA---SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGD 696 (824)
Q Consensus 620 ~~~~~~~~~~~~~GT~~Y~APE~l~---~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~ 696 (824)
......|++.|+|||++. ...++.++|||||||++|+|++|.+||.............. .. ..+....
T Consensus 162 -------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~-~~-~~~~~~~ 232 (267)
T cd06645 162 -------KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTK-SN-FQPPKLK 232 (267)
T ss_pred -------ccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhc-cC-CCCCccc
Confidence 112346899999999974 45688999999999999999999999854332211111100 00 1111001
Q ss_pred CChhhHHHHHHHHHHHhhhccCCCCChH
Q 003384 697 WPFVQAEQLANLAMRCCEMSRKSRPELG 724 (824)
Q Consensus 697 ~p~~~~~~l~~Li~~Cl~~~P~~RPt~~ 724 (824)
.....+..+.+++.+||..+|++||++.
T Consensus 233 ~~~~~~~~~~~li~~~l~~~P~~R~~~~ 260 (267)
T cd06645 233 DKMKWSNSFHHFVKMALTKNPKKRPTAE 260 (267)
T ss_pred ccCCCCHHHHHHHHHHccCCchhCcCHH
Confidence 1112345789999999999999999983
No 191
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=8.3e-35 Score=307.96 Aligned_cols=252 Identities=30% Similarity=0.508 Sum_probs=200.8
Q ss_pred cCCCCccceeeecCceEEEEEEECC-eEEEEEEecCCCCCCchhHHHHHHHHHhcCCCceeeEecccC--CceEEEEEec
Q 003384 463 THNFDPSLKIGEGGYGSIYKGLLRH-MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYL 539 (824)
Q Consensus 463 ~~~f~~~~~LG~G~fG~Vykg~~~~-~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~Ey~ 539 (824)
..+|.+.+.||.|+||.||+|.+.+ ..||||.+.... .....+.+|+.++++++||||+++++++. ...++||||+
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 83 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYM 83 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCc-cCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEecc
Confidence 3578888999999999999998764 679999987543 34567999999999999999999999884 4688999999
Q ss_pred CCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccccccc
Q 003384 540 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEIS 619 (824)
Q Consensus 540 ~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~ 619 (824)
++++|.+++.... ...+++..+..++.+++.||.|||. ++++|+||||+||+++.++.+||+|||++..+......
T Consensus 84 ~~~~L~~~i~~~~-~~~~~~~~~~~~~~~i~~al~~lh~---~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~ 159 (261)
T cd05034 84 SKGSLLDFLKSGE-GKKLRLPQLVDMAAQIAEGMAYLES---RNYIHRDLAARNILVGENLVCKIADFGLARLIEDDEYT 159 (261)
T ss_pred CCCCHHHHHhccc-cCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCcchheEEEcCCCCEEECccccceeccchhhh
Confidence 9999999985432 3468999999999999999999999 88999999999999999999999999998866432211
Q ss_pred CCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHh-CCCCCCCchHHHHHHhhhccccccCCCCCCCC
Q 003384 620 SNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWP 698 (824)
Q Consensus 620 ~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELlt-G~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p 698 (824)
. .....++..|+|||.+.+..++.++|||||||++|+|+| |+.||............ ........+
T Consensus 160 ~-------~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~------~~~~~~~~~ 226 (261)
T cd05034 160 A-------REGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQV------ERGYRMPRP 226 (261)
T ss_pred h-------hhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH------HcCCCCCCC
Confidence 1 112235678999999998899999999999999999999 99999654322111111 000111123
Q ss_pred hhhHHHHHHHHHHHhhhccCCCCChHHHHHHHHHH
Q 003384 699 FVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEP 733 (824)
Q Consensus 699 ~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le~ 733 (824)
...+..+.+++.+|++.+|.+||++ +++.+.|+.
T Consensus 227 ~~~~~~~~~~i~~~l~~~p~~Rp~~-~~l~~~l~~ 260 (261)
T cd05034 227 PNCPEELYDLMLQCWDKDPEERPTF-EYLQSFLED 260 (261)
T ss_pred CCCCHHHHHHHHHHcccCcccCCCH-HHHHHHHhc
Confidence 3346789999999999999999999 677776653
No 192
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=1.1e-34 Score=305.07 Aligned_cols=242 Identities=27% Similarity=0.438 Sum_probs=190.4
Q ss_pred eeeecCceEEEEEEEC-CeEEEEEEecCCCCCC-chhHHHHHHHHHhcCCCceeeEecccC--CceEEEEEecCCCChhh
Q 003384 471 KIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQG-PSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYLPNGSLED 546 (824)
Q Consensus 471 ~LG~G~fG~Vykg~~~-~~~VAvK~l~~~~~~~-~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~Ey~~ggsL~~ 546 (824)
+||+|+||.||+|... +..||+|.+....... ...+.+|+++++.++||||++++++|. ...++||||+++++|.+
T Consensus 2 ~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 81 (250)
T cd05085 2 LLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFLS 81 (250)
T ss_pred ccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHHH
Confidence 5999999999999865 4789999987543221 235889999999999999999999884 46889999999999999
Q ss_pred hhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccccCCCcccc
Q 003384 547 RLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLC 626 (824)
Q Consensus 547 ~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~~~~~~~~ 626 (824)
++... ...+++..+..++.+++.||.|||. ++++||||||+||+++.++.+||+|||++..........
T Consensus 82 ~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~---~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~------ 150 (250)
T cd05085 82 FLRKK--KDELKTKQLVKFALDAAAGMAYLES---KNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSS------ 150 (250)
T ss_pred HHHhc--CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccChheEEEcCCCeEEECCCccceecccccccc------
Confidence 88532 3458899999999999999999999 899999999999999999999999999987543321110
Q ss_pred ccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHh-CCCCCCCchHHHHHHhhhccccccCCCCCCCChhhHHHH
Q 003384 627 CRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQL 705 (824)
Q Consensus 627 ~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELlt-G~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l 705 (824)
.....+++.|+|||++.++.++.++|||||||++|+|++ |..||............. . ......+...+..+
T Consensus 151 -~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~---~---~~~~~~~~~~~~~~ 223 (250)
T cd05085 151 -SGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVE---K---GYRMSCPQKCPDDV 223 (250)
T ss_pred -CCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHH---c---CCCCCCCCCCCHHH
Confidence 012235678999999998899999999999999999998 999996543322111111 1 01112233456789
Q ss_pred HHHHHHHhhhccCCCCChHHHHHHHH
Q 003384 706 ANLAMRCCEMSRKSRPELGKDVWRVL 731 (824)
Q Consensus 706 ~~Li~~Cl~~~P~~RPt~~~~v~~~L 731 (824)
.+++.+|++.+|.+||++ .++.+.|
T Consensus 224 ~~li~~~l~~~p~~Rp~~-~~l~~~l 248 (250)
T cd05085 224 YKVMQRCWDYKPENRPKF-SELQKEL 248 (250)
T ss_pred HHHHHHHcccCcccCCCH-HHHHHHh
Confidence 999999999999999999 5665554
No 193
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=4.8e-35 Score=315.69 Aligned_cols=242 Identities=24% Similarity=0.327 Sum_probs=191.1
Q ss_pred CCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCC---chhHHHHHHHHHhcCCCceeeEecccC--CceEEEEEe
Q 003384 466 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG---PSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEY 538 (824)
Q Consensus 466 f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~---~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~Ey 538 (824)
|+..+.||+|+||.||++... +..||||.+....... ...+.+|+.+++.++|+||+.+++.+. +..++||||
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 81 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence 666788999999999999886 5789999986543222 235778999999999999999999874 568899999
Q ss_pred cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccc
Q 003384 539 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEI 618 (824)
Q Consensus 539 ~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~ 618 (824)
++||+|.+++.... ...+++..+..++.|++.||.|||+ .+|+||||||+|||++.++.++|+|||++........
T Consensus 82 ~~g~~L~~~l~~~~-~~~l~~~~~~~~~~qi~~~l~~lH~---~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~ 157 (285)
T cd05630 82 MNGGDLKFHIYHMG-EAGFEEGRAVFYAAEICCGLEDLHQ---ERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT 157 (285)
T ss_pred cCCCcHHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCCCHHHEEECCCCCEEEeeccceeecCCCcc
Confidence 99999999885432 3458899999999999999999999 8999999999999999999999999999876532211
Q ss_pred cCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCCCCC
Q 003384 619 SSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWP 698 (824)
Q Consensus 619 ~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p 698 (824)
.....||+.|+|||++.+..++.++|||||||++|+|++|++||........ ...............+
T Consensus 158 ---------~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~---~~~~~~~~~~~~~~~~ 225 (285)
T cd05630 158 ---------IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK---REEVERLVKEVQEEYS 225 (285)
T ss_pred ---------ccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccch---HHHHHhhhhhhhhhcC
Confidence 0234689999999999999999999999999999999999999975321100 0000111111111223
Q ss_pred hhhHHHHHHHHHHHhhhccCCCCCh
Q 003384 699 FVQAEQLANLAMRCCEMSRKSRPEL 723 (824)
Q Consensus 699 ~~~~~~l~~Li~~Cl~~~P~~RPt~ 723 (824)
...+..+.+|+.+||+.+|.+||++
T Consensus 226 ~~~~~~~~~li~~~l~~~p~~R~s~ 250 (285)
T cd05630 226 EKFSPDARSLCKMLLCKDPKERLGC 250 (285)
T ss_pred ccCCHHHHHHHHHHhhcCHHHccCC
Confidence 3455689999999999999999994
No 194
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=6.6e-35 Score=325.77 Aligned_cols=246 Identities=21% Similarity=0.268 Sum_probs=189.5
Q ss_pred hcCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCC--CCCchhHHHHHHHHHhcCCCceeeEecccCC-------
Q 003384 462 ATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS--LQGPSEFQQEIDILSKIRHPNLVTLVGACPE------- 530 (824)
Q Consensus 462 ~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~--~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~~------- 530 (824)
..++|...+.||+|+||.||++... +..||||++.... ......+.+|+.+++.++||||+++++++..
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 3468999999999999999999875 5789999987532 2223567899999999999999999987632
Q ss_pred -ceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccc
Q 003384 531 -VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGI 609 (824)
Q Consensus 531 -~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGl 609 (824)
..++||||+++ +|.+.+. ..+++..+..++.|++.||.|||+ +||+||||||+|||++.++.+||+|||+
T Consensus 102 ~~~~lv~e~~~~-~l~~~~~-----~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~DfG~ 172 (364)
T cd07875 102 QDVYIVMELMDA-NLCQVIQ-----MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGL 172 (364)
T ss_pred CeEEEEEeCCCC-CHHHHHH-----hcCCHHHHHHHHHHHHHHHHHHhh---CCeecCCCCHHHEEECCCCcEEEEeCCC
Confidence 36899999965 6777663 247888999999999999999999 8999999999999999999999999999
Q ss_pred ccccccccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhc----
Q 003384 610 SRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGK---- 685 (824)
Q Consensus 610 a~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~---- 685 (824)
++....... .....||+.|+|||++.+..++.++|||||||+||+|++|+.||...+........-.
T Consensus 173 a~~~~~~~~---------~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~ 243 (364)
T cd07875 173 ARTAGTSFM---------MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGT 243 (364)
T ss_pred ccccCCCCc---------ccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCC
Confidence 976532211 1234689999999999999999999999999999999999999976543221100000
Q ss_pred --------c-----------------------ccccCCCCCCCChhhHHHHHHHHHHHhhhccCCCCChHH
Q 003384 686 --------L-----------------------KNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 686 --------~-----------------------~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
+ ...+.+............+.+|+.+||+.+|.+|||+.+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e 314 (364)
T cd07875 244 PCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDE 314 (364)
T ss_pred CCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHH
Confidence 0 000000001111123457899999999999999999943
No 195
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.9e-36 Score=332.93 Aligned_cols=238 Identities=29% Similarity=0.463 Sum_probs=197.1
Q ss_pred eeeecCceEEEEEEECC--eEEEEEEecCCCCCCchhHHHHHHHHHhcCCCceeeEecccCC--ceEEEEEecCCCChhh
Q 003384 471 KIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPE--VWTLVYEYLPNGSLED 546 (824)
Q Consensus 471 ~LG~G~fG~Vykg~~~~--~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~~--~~~LV~Ey~~ggsL~~ 546 (824)
+||+|.||+||-|++.. ..+|||-+.........-+..|+.+.+.|+|.|||+++|+|.+ .+-|.||-+|||||.+
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSs 661 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSS 661 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHH
Confidence 69999999999999876 4579998877666666678999999999999999999999965 3558999999999999
Q ss_pred hhhccCCCCCC--CHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEec-CCCcceeeccccccccccccccCCCc
Q 003384 547 RLSCKDNSPPL--SWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLD-ANFVSKLSDFGISRFLSQNEISSNNT 623 (824)
Q Consensus 547 ~L~~~~~~~~l--~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld-~~~~vKL~DFGla~~~~~~~~~~~~~ 623 (824)
+|..+- +|+ ++.+...+..||++||.|||. +.|||||||-+|||++ -.|.+||+|||.++.+..-.
T Consensus 662 LLrskW--GPlKDNEstm~fYtkQILeGLkYLHe---n~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAgin------ 730 (1226)
T KOG4279|consen 662 LLRSKW--GPLKDNESTMNFYTKQILEGLKYLHE---NKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGIN------ 730 (1226)
T ss_pred HHHhcc--CCCccchhHHHHHHHHHHHHhhhhhh---cceeeccccCCcEEEeeccceEEecccccchhhccCC------
Confidence 997553 445 788899999999999999999 7799999999999995 68999999999998765321
Q ss_pred cccccCCCCCCcccCChhhhccC--CCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCCCCChhh
Q 003384 624 TLCCRTDPKGTFAYMDPEFLASG--ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQ 701 (824)
Q Consensus 624 ~~~~~~~~~GT~~Y~APE~l~~~--~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~ 701 (824)
.+..+..||..|||||++..+ +|++++|||||||++.||.||+|||.-....+.++-.--+. ...++.|...
T Consensus 731 --P~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVGmy----KvHP~iPeel 804 (1226)
T KOG4279|consen 731 --PCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVGMY----KVHPPIPEEL 804 (1226)
T ss_pred --ccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhhcce----ecCCCCcHHH
Confidence 122456799999999999876 69999999999999999999999996444443333221111 1234567788
Q ss_pred HHHHHHHHHHHhhhccCCCCChHH
Q 003384 702 AEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 702 ~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
+.+...+|++|+..+|.+||+...
T Consensus 805 saeak~FilrcFepd~~~R~sA~~ 828 (1226)
T KOG4279|consen 805 SAEAKNFILRCFEPDPCDRPSAKD 828 (1226)
T ss_pred HHHHHHHHHHHcCCCcccCccHHH
Confidence 899999999999999999999843
No 196
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=6.2e-35 Score=319.06 Aligned_cols=256 Identities=25% Similarity=0.422 Sum_probs=200.8
Q ss_pred CCCCccceeeecCceEEEEEEEC---------CeEEEEEEecCCCC-CCchhHHHHHHHHHhc-CCCceeeEecccC--C
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLLR---------HMQVAIKMLHPHSL-QGPSEFQQEIDILSKI-RHPNLVTLVGACP--E 530 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~~---------~~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l-~HpnIv~L~g~~~--~ 530 (824)
.+|...+.||+|+||.||+|... ...||+|.+..... .....+..|+.+++.+ +||||++++++|. .
T Consensus 12 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (314)
T cd05099 12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEG 91 (314)
T ss_pred HHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCC
Confidence 46788899999999999999752 24699999875422 2234688999999999 6999999999884 4
Q ss_pred ceEEEEEecCCCChhhhhhccC-------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEec
Q 003384 531 VWTLVYEYLPNGSLEDRLSCKD-------------NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLD 597 (824)
Q Consensus 531 ~~~LV~Ey~~ggsL~~~L~~~~-------------~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld 597 (824)
..++||||+++|+|.+++.... ....+++..+..++.|++.||.|||+ +|++||||||+|||++
T Consensus 92 ~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~---~gi~H~dlkp~Nill~ 168 (314)
T cd05099 92 PLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLES---RRCIHRDLAARNVLVT 168 (314)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHH---CCeeeccccceeEEEc
Confidence 5789999999999999985432 12458999999999999999999999 8999999999999999
Q ss_pred CCCcceeeccccccccccccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHh-CCCCCCCchH
Q 003384 598 ANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKE 676 (824)
Q Consensus 598 ~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELlt-G~~Pf~~~~~ 676 (824)
.++.+||+|||+++.......... .....++..|+|||++.+..++.++|||||||++|+|++ |..||.....
T Consensus 169 ~~~~~kL~Dfg~~~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~ 242 (314)
T cd05099 169 EDNVMKIADFGLARGVHDIDYYKK------TSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPV 242 (314)
T ss_pred CCCcEEEccccccccccccccccc------cccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCH
Confidence 999999999999986543221110 012235578999999998899999999999999999999 8999975432
Q ss_pred HH--HHHhhhccccccCCCCCCCChhhHHHHHHHHHHHhhhccCCCCChHHHHHHHHHHHHhh
Q 003384 677 VQ--YALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRAS 737 (824)
Q Consensus 677 ~~--~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le~l~~~ 737 (824)
.. .....+ .....+...+..+.+++.+||..+|.+||++ .++++.|..+...
T Consensus 243 ~~~~~~~~~~--------~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~-~~ll~~l~~~~~~ 296 (314)
T cd05099 243 EELFKLLREG--------HRMDKPSNCTHELYMLMRECWHAVPTQRPTF-KQLVEALDKVLAA 296 (314)
T ss_pred HHHHHHHHcC--------CCCCCCCCCCHHHHHHHHHHcCCCcccCcCH-HHHHHHHHHHHHH
Confidence 21 111111 1112234456689999999999999999999 7788888877553
No 197
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=8.6e-35 Score=312.34 Aligned_cols=256 Identities=26% Similarity=0.390 Sum_probs=200.0
Q ss_pred CChhhHhhhcCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCCchhHHHHHHHHHhc-CCCceeeEecccC-
Q 003384 454 FSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKI-RHPNLVTLVGACP- 529 (824)
Q Consensus 454 ~~~~ei~~~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l-~HpnIv~L~g~~~- 529 (824)
+.++.+.....+|.....||+|+||.||+|... +..+|+|++..... ....+.+|+.+++.+ +||||++++++|.
T Consensus 8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~-~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 86 (286)
T cd06638 8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHD-IDEEIEAEYNILKALSDHPNVVKFYGMYYK 86 (286)
T ss_pred EEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccc-hHHHHHHHHHHHHHHhcCCCeeeeeeeeee
Confidence 345666778889999999999999999999875 57899998765322 235688999999999 6999999999862
Q ss_pred ------CceEEEEEecCCCChhhhhhcc-CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcc
Q 003384 530 ------EVWTLVYEYLPNGSLEDRLSCK-DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVS 602 (824)
Q Consensus 530 ------~~~~LV~Ey~~ggsL~~~L~~~-~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~v 602 (824)
+.+++||||+++|+|.+++... .....+++..+..++.+++.||.|||+ ++|+||||||+||+++.++.+
T Consensus 87 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nili~~~~~~ 163 (286)
T cd06638 87 KDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHV---NKTIHRDVKGNNILLTTEGGV 163 (286)
T ss_pred cccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHh---CCccccCCCHHhEEECCCCCE
Confidence 3479999999999999987532 234568889999999999999999999 899999999999999999999
Q ss_pred eeeccccccccccccccCCCccccccCCCCCCcccCChhhhcc-----CCCCcchhHHhHHHHHHHHHhCCCCCCCchHH
Q 003384 603 KLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLAS-----GELTPKSDVYSFGIILLRLLTGRPALGITKEV 677 (824)
Q Consensus 603 KL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-----~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~ 677 (824)
||+|||++..+...... .....|++.|+|||++.. ..++.++|||||||++|+|++|++||......
T Consensus 164 kl~dfg~~~~~~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~ 235 (286)
T cd06638 164 KLVDFGVSAQLTSTRLR--------RNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPM 235 (286)
T ss_pred EEccCCceeecccCCCc--------cccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchh
Confidence 99999998865432111 123458999999999853 45788999999999999999999999755433
Q ss_pred HHHHhhhccccccCCCCCCCChhhHHHHHHHHHHHhhhccCCCCChHH
Q 003384 678 QYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 678 ~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
......... . +.....+...+..+.+++.+||+.+|.+||++.+
T Consensus 236 ~~~~~~~~~---~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e 279 (286)
T cd06638 236 RALFKIPRN---P-PPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSD 279 (286)
T ss_pred HHHhhcccc---C-CCcccCCCCcCHHHHHHHHHHccCCcccCCCHHH
Confidence 322111110 0 0011122334567999999999999999999943
No 198
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1e-34 Score=315.00 Aligned_cols=246 Identities=24% Similarity=0.379 Sum_probs=199.0
Q ss_pred cCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCCchhHHHHHHHHHhcCCCceeeEeccc--CCceEEEEEe
Q 003384 463 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEY 538 (824)
Q Consensus 463 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~--~~~~~LV~Ey 538 (824)
..+|+..+.||.|+||.||+|... +..|++|.+..........+.+|+.+++.++||||+++++++ .+..++||||
T Consensus 18 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 97 (296)
T cd06655 18 KKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEY 97 (296)
T ss_pred cceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEe
Confidence 346888999999999999999864 688999998765555556788999999999999999999988 3568999999
Q ss_pred cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccc
Q 003384 539 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEI 618 (824)
Q Consensus 539 ~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~ 618 (824)
+++++|.+++. ...+++..+..++.+++.||.|||+ +|++||||||+||+++.++.+||+|||++........
T Consensus 98 ~~~~~L~~~~~----~~~l~~~~~~~i~~~l~~al~~LH~---~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~ 170 (296)
T cd06655 98 LAGGSLTDVVT----ETCMDEAQIAAVCRECLQALEFLHA---NQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQS 170 (296)
T ss_pred cCCCcHHHHHH----hcCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEccCccchhcccccc
Confidence 99999999884 2358999999999999999999999 8999999999999999999999999999876543221
Q ss_pred cCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCCCCC
Q 003384 619 SSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWP 698 (824)
Q Consensus 619 ~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p 698 (824)
. .....|++.|+|||.+.+..++.++|||||||++|+|++|++||............... . ......+
T Consensus 171 ~--------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~--~--~~~~~~~ 238 (296)
T cd06655 171 K--------RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATN--G--TPELQNP 238 (296)
T ss_pred c--------CCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc--C--CcccCCc
Confidence 1 12345899999999999888999999999999999999999999765543322111100 0 0011123
Q ss_pred hhhHHHHHHHHHHHhhhccCCCCChHHHH
Q 003384 699 FVQAEQLANLAMRCCEMSRKSRPELGKDV 727 (824)
Q Consensus 699 ~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v 727 (824)
...+..+.+++.+||..+|.+||++.+.+
T Consensus 239 ~~~~~~~~~li~~~l~~dp~~Rpt~~~il 267 (296)
T cd06655 239 EKLSPIFRDFLNRCLEMDVEKRGSAKELL 267 (296)
T ss_pred ccCCHHHHHHHHHHhhcChhhCCCHHHHh
Confidence 34556899999999999999999995443
No 199
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=1.1e-34 Score=309.03 Aligned_cols=249 Identities=22% Similarity=0.367 Sum_probs=183.6
Q ss_pred eeeecCceEEEEEEEC----CeEEEEEEecCCCC-CCchhHHHHHHHHHhcCCCceeeEecccC--CceEEEEEecCCCC
Q 003384 471 KIGEGGYGSIYKGLLR----HMQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYLPNGS 543 (824)
Q Consensus 471 ~LG~G~fG~Vykg~~~----~~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~Ey~~ggs 543 (824)
.||+|+||.||+|... ...+++|.+..... .....|.+|+.+++.++||||++++|.|. ...++||||+++|+
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~ 81 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGD 81 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCc
Confidence 5999999999999753 24688888764332 12346889999999999999999999884 46899999999999
Q ss_pred hhhhhhccCC--CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccccCC
Q 003384 544 LEDRLSCKDN--SPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSN 621 (824)
Q Consensus 544 L~~~L~~~~~--~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~~~ 621 (824)
|.+++..... ...+++.....++.|++.||.|||+ ++|+||||||+|||++.++.+||+|||++...........
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~ 158 (269)
T cd05042 82 LKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQ---ADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYIT 158 (269)
T ss_pred HHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHh---cCEecccccHhheEecCCCcEEEeccccccccccchheec
Confidence 9999864322 2335677888999999999999999 8999999999999999999999999999875432211100
Q ss_pred CccccccCCCCCCcccCChhhhcc-------CCCCcchhHHhHHHHHHHHHh-CCCCCCCchHHHHHHhhhccccccCCC
Q 003384 622 NTTLCCRTDPKGTFAYMDPEFLAS-------GELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPL 693 (824)
Q Consensus 622 ~~~~~~~~~~~GT~~Y~APE~l~~-------~~~t~ksDVwSlGvvL~ELlt-G~~Pf~~~~~~~~~~~~~~~~~~ld~~ 693 (824)
.....+++.|+|||++.. ..++.++|||||||++|||++ |.+||......... .........+..
T Consensus 159 ------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~-~~~~~~~~~~~~ 231 (269)
T cd05042 159 ------KDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVL-KQVVREQDIKLP 231 (269)
T ss_pred ------cCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHH-HHHhhccCccCC
Confidence 122346788999999743 356789999999999999999 88898654332211 110011111111
Q ss_pred CCCCChhhHHHHHHHHHHHhhhccCCCCChHHHHHHHH
Q 003384 694 AGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVL 731 (824)
Q Consensus 694 ~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~L 731 (824)
....+...+..+.+++..|+ .+|.+||++ ++|.+.|
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~-~~v~~~l 267 (269)
T cd05042 232 KPQLDLKYSDRWYEVMQFCW-LDPETRPTA-EEVHELL 267 (269)
T ss_pred CCcccccCCHHHHHHHHHHh-cCcccccCH-HHHHHHh
Confidence 12233345667888898998 599999998 6666654
No 200
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=3.5e-35 Score=329.44 Aligned_cols=246 Identities=24% Similarity=0.291 Sum_probs=189.2
Q ss_pred hhhcCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCC---CCCchhHHHHHHHHHhcCCCceeeEecccC--Cce
Q 003384 460 EGATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS---LQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVW 532 (824)
Q Consensus 460 ~~~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~---~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~ 532 (824)
.....+|...+.||+|+||.||++... +..||+|++.... ......+.+|+.+++.++||||+++++++. ...
T Consensus 39 ~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~ 118 (371)
T cd05622 39 RMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYL 118 (371)
T ss_pred CcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEE
Confidence 334468999999999999999999886 4789999986422 122345788999999999999999999884 468
Q ss_pred EEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccc
Q 003384 533 TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRF 612 (824)
Q Consensus 533 ~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~ 612 (824)
++||||++||+|.+++.. ..++...+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||++..
T Consensus 119 ~lv~Ey~~gg~L~~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~ 191 (371)
T cd05622 119 YMVMEYMPGGDLVNLMSN----YDVPEKWARFYTAEVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCMK 191 (371)
T ss_pred EEEEcCCCCCcHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHH---CCEEeCCCCHHHEEECCCCCEEEEeCCceeE
Confidence 899999999999998842 347888889999999999999999 8999999999999999999999999999986
Q ss_pred cccccccCCCccccccCCCCCCcccCChhhhccC----CCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhcccc
Q 003384 613 LSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG----ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKN 688 (824)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~----~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~ 688 (824)
+....... .....||+.|+|||++.+. .++.++|||||||+||||++|++||............-....
T Consensus 192 ~~~~~~~~-------~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~ 264 (371)
T cd05622 192 MNKEGMVR-------CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKN 264 (371)
T ss_pred cCcCCccc-------ccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCC
Confidence 54322110 1235699999999998754 378899999999999999999999986654322111100000
Q ss_pred ccCCCCCCCChhhHHHHHHHHHHHhhhccCC---CCCh
Q 003384 689 LLDPLAGDWPFVQAEQLANLAMRCCEMSRKS---RPEL 723 (824)
Q Consensus 689 ~ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~---RPt~ 723 (824)
......+...+..+.+++..|+. +|.. ||++
T Consensus 265 ---~~~~~~~~~~s~~~~~li~~~L~-~~~~r~~r~~~ 298 (371)
T cd05622 265 ---SLTFPDDNDISKEAKNLICAFLT-DREVRLGRNGV 298 (371)
T ss_pred ---cccCCCcCCCCHHHHHHHHHHcC-ChhhhcCCCCH
Confidence 01111122456789999999998 4444 6676
No 201
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=1.9e-34 Score=306.15 Aligned_cols=249 Identities=24% Similarity=0.447 Sum_probs=195.2
Q ss_pred CCCccceeeecCceEEEEEEEC-CeEEEEEEecCCCCCC------chhHHHHHHHHHhcCCCceeeEecccC--CceEEE
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQG------PSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLV 535 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~-~~~VAvK~l~~~~~~~------~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV 535 (824)
+|.....||.|+||.||+|... +..+|||.+....... ...+.+|+++++.++||||++++++|. ...++|
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence 3667788999999999999874 5789999886542211 245889999999999999999999984 468899
Q ss_pred EEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccc
Q 003384 536 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQ 615 (824)
Q Consensus 536 ~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~ 615 (824)
|||+++++|.+++.. ..++++..+..++.+++.||.|||. .+|+|+||+|+||+++.++.+||+|||++.....
T Consensus 81 ~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 154 (265)
T cd06631 81 MEFVPGGSISSILNR---FGPLPEPVFCKYTKQILDGVAYLHN---NCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAW 154 (265)
T ss_pred EecCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCcCHHhEEECCCCeEEeccchhhHhhhh
Confidence 999999999999843 2458889999999999999999999 8899999999999999999999999999886532
Q ss_pred ccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCC
Q 003384 616 NEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAG 695 (824)
Q Consensus 616 ~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~ 695 (824)
........ .......|+..|+|||++.+..++.++|||||||++|+|++|++||................... .
T Consensus 155 ~~~~~~~~--~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~----~ 228 (265)
T cd06631 155 VGLHGTHS--NMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLM----P 228 (265)
T ss_pred cccccccc--ccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccCCC----C
Confidence 21111100 01123458999999999998889999999999999999999999997654433222211111111 1
Q ss_pred CCChhhHHHHHHHHHHHhhhccCCCCChHH
Q 003384 696 DWPFVQAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 696 ~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
..+...+..+.+++.+||+.+|.+||++.+
T Consensus 229 ~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ 258 (265)
T cd06631 229 RLPDSFSAAAIDFVTSCLTRDQHERPSALQ 258 (265)
T ss_pred CCCCCCCHHHHHHHHHHhcCCcccCCCHHH
Confidence 223445678999999999999999999943
No 202
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=1.1e-34 Score=305.38 Aligned_cols=242 Identities=28% Similarity=0.393 Sum_probs=196.6
Q ss_pred CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCCchhHHHHHHHHHhcCCCceeeEecccC--CceEEEEEec
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYL 539 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~Ey~ 539 (824)
++|+..+.||.|+||.||+|... +..|++|.+..... ...+.+|+++++.++||||++++|++. ...+++|||+
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~ 80 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYC 80 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecC
Confidence 46888899999999999999886 47899999875432 568999999999999999999999884 4688999999
Q ss_pred CCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccccccc
Q 003384 540 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEIS 619 (824)
Q Consensus 540 ~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~ 619 (824)
++++|.+++.. ....+++..+..++.+++.||.|||+ .+++||||+|.||+++.++.+||+|||++.........
T Consensus 81 ~~~~L~~~l~~--~~~~l~~~~~~~~~~~l~~~l~~lh~---~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~~ 155 (256)
T cd06612 81 GAGSVSDIMKI--TNKTLTEEEIAAILYQTLKGLEYLHS---NKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAK 155 (256)
T ss_pred CCCcHHHHHHh--CccCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcceEEECCCCcEEEcccccchhcccCccc
Confidence 99999999853 23568999999999999999999999 78999999999999999999999999998866433211
Q ss_pred CCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCCCCCh
Q 003384 620 SNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPF 699 (824)
Q Consensus 620 ~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~ 699 (824)
.....|+..|+|||++.+..++.++|||||||++|+|+||++||............... .......+.
T Consensus 156 --------~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~~----~~~~~~~~~ 223 (256)
T cd06612 156 --------RNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNK----PPPTLSDPE 223 (256)
T ss_pred --------cccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhccC----CCCCCCchh
Confidence 12345889999999999889999999999999999999999999755433221111110 001111223
Q ss_pred hhHHHHHHHHHHHhhhccCCCCChH
Q 003384 700 VQAEQLANLAMRCCEMSRKSRPELG 724 (824)
Q Consensus 700 ~~~~~l~~Li~~Cl~~~P~~RPt~~ 724 (824)
..+..+.+++.+||+.+|.+||++.
T Consensus 224 ~~~~~~~~~i~~~l~~~P~~Rps~~ 248 (256)
T cd06612 224 KWSPEFNDFVKKCLVKDPEERPSAI 248 (256)
T ss_pred hcCHHHHHHHHHHHhcChhhCcCHH
Confidence 3456899999999999999999994
No 203
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=5.9e-35 Score=337.37 Aligned_cols=249 Identities=22% Similarity=0.296 Sum_probs=186.0
Q ss_pred HhhhcCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCCchhHHHHHHHHHhcCC------CceeeEecccC-
Q 003384 459 IEGATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRH------PNLVTLVGACP- 529 (824)
Q Consensus 459 i~~~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~H------pnIv~L~g~~~- 529 (824)
+...+++|.+.++||+|+||+||+|.+. +..||||+++... .....+..|+.++..++| +++++++++|.
T Consensus 124 ~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~ 202 (467)
T PTZ00284 124 IDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQN 202 (467)
T ss_pred cccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEc
Confidence 4445678999999999999999999875 5789999986432 123456778888888765 45888888873
Q ss_pred --CceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCC-------
Q 003384 530 --EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANF------- 600 (824)
Q Consensus 530 --~~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~------- 600 (824)
...++|||++ |++|.+++.. ...+++..+..|+.||+.||.|||+. .|||||||||+||||+.++
T Consensus 203 ~~~~~~iv~~~~-g~~l~~~l~~---~~~l~~~~~~~i~~qi~~aL~yLH~~--~gIiHrDlKP~NILl~~~~~~~~~~~ 276 (467)
T PTZ00284 203 ETGHMCIVMPKY-GPCLLDWIMK---HGPFSHRHLAQIIFQTGVALDYFHTE--LHLMHTDLKPENILMETSDTVVDPVT 276 (467)
T ss_pred CCceEEEEEecc-CCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhc--CCeecCCCCHHHEEEecCCccccccc
Confidence 3578999988 7788888843 34689999999999999999999971 3899999999999998765
Q ss_pred ---------cceeeccccccccccccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCC
Q 003384 601 ---------VSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPAL 671 (824)
Q Consensus 601 ---------~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf 671 (824)
.+||+|||++...... .....||+.|+|||++.+..|+.++|||||||+||||+||++||
T Consensus 277 ~~~~~~~~~~vkl~DfG~~~~~~~~-----------~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf 345 (467)
T PTZ00284 277 NRALPPDPCRVRICDLGGCCDERHS-----------RTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLY 345 (467)
T ss_pred ccccCCCCceEEECCCCccccCccc-----------cccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCC
Confidence 4999999987532211 13356999999999999999999999999999999999999999
Q ss_pred CCchHHHHHHhh----hcc-------------ccccC------CCC------------CCCChhhHHHHHHHHHHHhhhc
Q 003384 672 GITKEVQYALDT----GKL-------------KNLLD------PLA------------GDWPFVQAEQLANLAMRCCEMS 716 (824)
Q Consensus 672 ~~~~~~~~~~~~----~~~-------------~~~ld------~~~------------~~~p~~~~~~l~~Li~~Cl~~~ 716 (824)
............ |.+ ..++. +.. ..........+.+|+.+||..|
T Consensus 346 ~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~d 425 (467)
T PTZ00284 346 DTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYD 425 (467)
T ss_pred CCCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcC
Confidence 765433211110 000 00000 000 0000112356789999999999
Q ss_pred cCCCCChHH
Q 003384 717 RKSRPELGK 725 (824)
Q Consensus 717 P~~RPt~~~ 725 (824)
|.+||++.+
T Consensus 426 P~~R~ta~e 434 (467)
T PTZ00284 426 RQKRLNARQ 434 (467)
T ss_pred hhhCCCHHH
Confidence 999999943
No 204
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=5.9e-35 Score=324.92 Aligned_cols=246 Identities=20% Similarity=0.270 Sum_probs=189.3
Q ss_pred hcCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC--CCchhHHHHHHHHHhcCCCceeeEecccC--------
Q 003384 462 ATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVGACP-------- 529 (824)
Q Consensus 462 ~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~--~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~-------- 529 (824)
..++|...+.||+|+||.||++... +..||||++..... .....+.+|+.+++.++||||+++++++.
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 94 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF 94 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence 3468999999999999999999865 57899999875422 22346778999999999999999999873
Q ss_pred CceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccc
Q 003384 530 EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGI 609 (824)
Q Consensus 530 ~~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGl 609 (824)
...++||||+++ +|.+.+. ..+++..+..++.|++.||.|||+ +||+||||||+|||++.++.+||+|||+
T Consensus 95 ~~~~lv~e~~~~-~l~~~~~-----~~l~~~~~~~~~~qi~~aL~~LH~---~givHrDikp~Nill~~~~~~kl~Dfg~ 165 (355)
T cd07874 95 QDVYLVMELMDA-NLCQVIQ-----MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGL 165 (355)
T ss_pred ceeEEEhhhhcc-cHHHHHh-----hcCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChHHEEECCCCCEEEeeCcc
Confidence 236899999965 6666663 247888999999999999999999 8999999999999999999999999999
Q ss_pred ccccccccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhh----h-
Q 003384 610 SRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDT----G- 684 (824)
Q Consensus 610 a~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~----~- 684 (824)
++....... .....||+.|+|||++.+..++.++|||||||++|+|++|+.||............ +
T Consensus 166 ~~~~~~~~~---------~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~ 236 (355)
T cd07874 166 ARTAGTSFM---------MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGT 236 (355)
T ss_pred cccCCCccc---------cCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC
Confidence 975432211 12346899999999999989999999999999999999999999765432211000 0
Q ss_pred -----------cccccc-------------------CCCCCCCChhhHHHHHHHHHHHhhhccCCCCChHH
Q 003384 685 -----------KLKNLL-------------------DPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 685 -----------~~~~~l-------------------d~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
.....+ -+.....+...+..+.+|+.+||..+|.+||++.+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~e 307 (355)
T cd07874 237 PCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDE 307 (355)
T ss_pred CCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHH
Confidence 000000 00001112223467899999999999999999944
No 205
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=9.4e-35 Score=306.76 Aligned_cols=243 Identities=23% Similarity=0.333 Sum_probs=195.0
Q ss_pred CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCC-CCCchhHHHHHHHHHhcCCCceeeEecccC--CceEEEEEec
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS-LQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYL 539 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~-~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~Ey~ 539 (824)
+|+..+.||.|+||.||++... +..||+|.+.... ....+.+..|+.+++.++||||+++++++. ...++||||+
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC 80 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence 4677889999999999999875 5789999986432 223457889999999999999999999884 4689999999
Q ss_pred CCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccccccc
Q 003384 540 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEIS 619 (824)
Q Consensus 540 ~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~ 619 (824)
++|+|.+++... ....++......++.+++.||.|||+ ++|+|+||||+|||++.++.++|+|||++.........
T Consensus 81 ~~~~l~~~~~~~-~~~~~~~~~~~~~~~~i~~al~~lH~---~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~ 156 (255)
T cd08219 81 DGGDLMQKIKLQ-RGKLFPEDTILQWFVQMCLGVQHIHE---KRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAY 156 (255)
T ss_pred CCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCcceEEECCCCcEEEcccCcceeecccccc
Confidence 999999988532 23458899999999999999999999 89999999999999999999999999998765432211
Q ss_pred CCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCCCCCh
Q 003384 620 SNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPF 699 (824)
Q Consensus 620 ~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~ 699 (824)
.....|++.|+|||++.+..++.++||||||+++|+|++|.+||............ ...... ..+.
T Consensus 157 --------~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~--~~~~~~----~~~~ 222 (255)
T cd08219 157 --------ACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKV--CQGSYK----PLPS 222 (255)
T ss_pred --------cccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHH--hcCCCC----CCCc
Confidence 12345899999999998888999999999999999999999999765443221111 011111 1233
Q ss_pred hhHHHHHHHHHHHhhhccCCCCChHH
Q 003384 700 VQAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 700 ~~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
..+..+.+++.+||+.+|.+||++.+
T Consensus 223 ~~~~~~~~li~~~l~~~P~~Rp~~~~ 248 (255)
T cd08219 223 HYSYELRSLIKQMFKRNPRSRPSATT 248 (255)
T ss_pred ccCHHHHHHHHHHHhCCcccCCCHHH
Confidence 34567999999999999999999943
No 206
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=6.5e-35 Score=351.38 Aligned_cols=252 Identities=21% Similarity=0.343 Sum_probs=195.3
Q ss_pred hhcCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCC--CchhHHHHHHHHHhcCCCceeeEecccC----Cce
Q 003384 461 GATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPNLVTLVGACP----EVW 532 (824)
Q Consensus 461 ~~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~--~~~~f~~Ei~iL~~l~HpnIv~L~g~~~----~~~ 532 (824)
....+|.+...||.|+||+||++... +..||+|++...... ....|..|+.+|+.|+|||||+++++|. ..+
T Consensus 10 ~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~l 89 (1021)
T PTZ00266 10 SRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKL 89 (1021)
T ss_pred cccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEE
Confidence 34458999999999999999999886 467999998754322 2356889999999999999999999872 358
Q ss_pred EEEEEecCCCChhhhhhcc-CCCCCCCHHHHHHHHHHHHHHHHHHhhcCC----CceEeccccCCcEEecC---------
Q 003384 533 TLVYEYLPNGSLEDRLSCK-DNSPPLSWQTRIRIATELCSVLIFLHSCKP----HSIVHGDLKPANILLDA--------- 598 (824)
Q Consensus 533 ~LV~Ey~~ggsL~~~L~~~-~~~~~l~~~~~~~ia~qia~aL~~LH~~~~----~giiHrDLKp~NILld~--------- 598 (824)
+|||||+++|+|.++|... .....+++..++.|+.||+.||.|||...+ ++||||||||+||||+.
T Consensus 90 yIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~ 169 (1021)
T PTZ00266 90 YILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKIT 169 (1021)
T ss_pred EEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccccccc
Confidence 8999999999999998642 223569999999999999999999998432 46999999999999964
Q ss_pred --------CCcceeeccccccccccccccCCCccccccCCCCCCcccCChhhhcc--CCCCcchhHHhHHHHHHHHHhCC
Q 003384 599 --------NFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLAS--GELTPKSDVYSFGIILLRLLTGR 668 (824)
Q Consensus 599 --------~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~--~~~t~ksDVwSlGvvL~ELltG~ 668 (824)
.+.+||+|||++..+..... .....||+.|+|||++.+ ..++.++||||||||||+|+||+
T Consensus 170 ~~~~n~ng~~iVKLsDFGlAr~l~~~s~---------~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk 240 (1021)
T PTZ00266 170 AQANNLNGRPIAKIGDFGLSKNIGIESM---------AHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGK 240 (1021)
T ss_pred ccccccCCCCceEEccCCcccccccccc---------ccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCC
Confidence 24589999999986543211 123468999999999864 45889999999999999999999
Q ss_pred CCCCCchHHHHHHhhhccccccCCCCCCCChhhHHHHHHHHHHHhhhccCCCCChHHHH
Q 003384 669 PALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDV 727 (824)
Q Consensus 669 ~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v 727 (824)
+||.........+... ...... .....+..+.+|+..||+.+|.+||++.+.+
T Consensus 241 ~PF~~~~~~~qli~~l--k~~p~l----pi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL 293 (1021)
T PTZ00266 241 TPFHKANNFSQLISEL--KRGPDL----PIKGKSKELNILIKNLLNLSAKERPSALQCL 293 (1021)
T ss_pred CCCCcCCcHHHHHHHH--hcCCCC----CcCCCCHHHHHHHHHHhcCChhHCcCHHHHh
Confidence 9997554333222211 010000 0122356899999999999999999995544
No 207
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-35 Score=326.17 Aligned_cols=257 Identities=28% Similarity=0.493 Sum_probs=213.1
Q ss_pred hhHhhhcCCCCccceeeecCceEEEEEEECC--eEEEEEEecCCCCCCchhHHHHHHHHHhcCCCceeeEecccC--Cce
Q 003384 457 SEIEGATHNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVW 532 (824)
Q Consensus 457 ~ei~~~~~~f~~~~~LG~G~fG~Vykg~~~~--~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~ 532 (824)
++++-...+....++||.|.||.||.|.|+. ..||||.++.+.+ ..++|..|..+|+.++|||+|+|+|+|. ..+
T Consensus 260 DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtM-eveEFLkEAAvMKeikHpNLVqLLGVCT~EpPF 338 (1157)
T KOG4278|consen 260 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPF 338 (1157)
T ss_pred chhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcch-hHHHHHHHHHHHHhhcCccHHHHhhhhccCCCe
Confidence 3444444456667899999999999999985 6799999986543 4678999999999999999999999994 579
Q ss_pred EEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccc
Q 003384 533 TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRF 612 (824)
Q Consensus 533 ~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~ 612 (824)
|||.|||..|+|.++|...+ ...++--..+.++.||+.|+.||.. +++|||||...|+|+.++..+||+||||+++
T Consensus 339 YIiTEfM~yGNLLdYLRecn-r~ev~avvLlyMAtQIsSaMeYLEk---knFIHRDLAARNCLVgEnhiVKvADFGLsRl 414 (1157)
T KOG4278|consen 339 YIITEFMCYGNLLDYLRECN-RSEVPAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHIVKVADFGLSRL 414 (1157)
T ss_pred EEEEecccCccHHHHHHHhc-hhhcchhHHHHHHHHHHHHHHHHHH---hhhhhhhhhhhhccccccceEEeeccchhhh
Confidence 99999999999999997553 3457777888999999999999999 8899999999999999999999999999999
Q ss_pred cccccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHh-CCCCCCCchH--HHHHHhhhccccc
Q 003384 613 LSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKE--VQYALDTGKLKNL 689 (824)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELlt-G~~Pf~~~~~--~~~~~~~~~~~~~ 689 (824)
+..+.+... .+..-.+-|.|||-+....++.|+|||+|||+|||+.| |-.||.+.+. +...++.|
T Consensus 415 MtgDTYTAH-------AGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEkg----- 482 (1157)
T KOG4278|consen 415 MTGDTYTAH-------AGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEKG----- 482 (1157)
T ss_pred hcCCceecc-------cCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhcc-----
Confidence 876654332 22334678999999999999999999999999999998 8889876543 22222222
Q ss_pred cCCCCCCCChhhHHHHHHHHHHHhhhccCCCCChHHHHHHHHHHH
Q 003384 690 LDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM 734 (824)
Q Consensus 690 ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le~l 734 (824)
..-+.|..+++.+.+|++.||+.+|.+||++ .++.+.++-+
T Consensus 483 ---yRM~~PeGCPpkVYeLMraCW~WsPsDRPsF-aeiHqafEtm 523 (1157)
T KOG4278|consen 483 ---YRMDGPEGCPPKVYELMRACWNWSPSDRPSF-AEIHQAFETM 523 (1157)
T ss_pred ---ccccCCCCCCHHHHHHHHHHhcCCcccCccH-HHHHHHHHHH
Confidence 1223577888999999999999999999999 6777777655
No 208
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=1.7e-34 Score=305.17 Aligned_cols=246 Identities=28% Similarity=0.366 Sum_probs=197.8
Q ss_pred CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCCchhHHHHHHHHHhcCCCceeeEeccc--CCceEEEEEec
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYL 539 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~--~~~~~LV~Ey~ 539 (824)
.+|...+.||.|+||.||+|... +..+++|++..........+.+|+.+++.++||||++++|++ ....+++|||+
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~ 82 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYC 82 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCC
Confidence 46888899999999999999875 478999999766544567799999999999999999999987 45688999999
Q ss_pred CCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccccccc
Q 003384 540 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEIS 619 (824)
Q Consensus 540 ~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~ 619 (824)
++++|.+++... ...++...+..++.|++.||.|||. ++|+||||+|+||+++.++.+||+|||++..+.....
T Consensus 83 ~~~~l~~~~~~~--~~~l~~~~~~~~~~ql~~~l~~lh~---~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~- 156 (262)
T cd06613 83 GGGSLQDIYQVT--RGPLSELQIAYVCRETLKGLAYLHE---TGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIA- 156 (262)
T ss_pred CCCcHHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHHh---CCceecCCChhhEEECCCCCEEECccccchhhhhhhh-
Confidence 999999988532 2568899999999999999999999 8899999999999999999999999999876543211
Q ss_pred CCCccccccCCCCCCcccCChhhhccC---CCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCCC
Q 003384 620 SNNTTLCCRTDPKGTFAYMDPEFLASG---ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGD 696 (824)
Q Consensus 620 ~~~~~~~~~~~~~GT~~Y~APE~l~~~---~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~ 696 (824)
......|+..|+|||.+.+. .++.++|||||||++|+|+||++||.............. ..+.+....
T Consensus 157 -------~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~--~~~~~~~~~ 227 (262)
T cd06613 157 -------KRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISK--SNFPPPKLK 227 (262)
T ss_pred -------ccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh--ccCCCcccc
Confidence 01234588999999999776 788999999999999999999999976543322221111 101111111
Q ss_pred CChhhHHHHHHHHHHHhhhccCCCCChH
Q 003384 697 WPFVQAEQLANLAMRCCEMSRKSRPELG 724 (824)
Q Consensus 697 ~p~~~~~~l~~Li~~Cl~~~P~~RPt~~ 724 (824)
.+...+..+.+++.+||..+|.+||++.
T Consensus 228 ~~~~~~~~~~~li~~~l~~~p~~Rpt~~ 255 (262)
T cd06613 228 DKEKWSPVFHDFIKKCLTKDPKKRPTAT 255 (262)
T ss_pred chhhhhHHHHHHHHHHcCCChhhCCCHH
Confidence 2334567899999999999999999993
No 209
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=1.4e-34 Score=305.38 Aligned_cols=247 Identities=26% Similarity=0.492 Sum_probs=195.4
Q ss_pred CCCccceeeecCceEEEEEEEC-CeEEEEEEecCCCCCCchhHHHHHHHHHhcCCCceeeEecccC--CceEEEEEecCC
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYLPN 541 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~-~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~Ey~~g 541 (824)
+|+..+.||.|+||.||+|.+. +..+|+|.+.... .....|.+|++++++++||||+++++++. ...++||||+++
T Consensus 5 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~ 83 (256)
T cd05112 5 ELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGA-MSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFMEH 83 (256)
T ss_pred HeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCC-CCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCCC
Confidence 5777889999999999999876 6789999886543 23457999999999999999999999884 467899999999
Q ss_pred CChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccccCC
Q 003384 542 GSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSN 621 (824)
Q Consensus 542 gsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~~~ 621 (824)
++|.+++... ..++++..+..++.+++.||.|||+ .+++||||||+||+++.++.+||+|||++..........
T Consensus 84 ~~L~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~- 157 (256)
T cd05112 84 GCLSDYLRAQ--RGKFSQETLLGMCLDVCEGMAYLES---SNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTS- 157 (256)
T ss_pred CcHHHHHHhC--ccCCCHHHHHHHHHHHHHHHHHHHH---CCccccccccceEEEcCCCeEEECCCcceeecccCcccc-
Confidence 9999998532 3468899999999999999999999 789999999999999999999999999987654321110
Q ss_pred CccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHh-CCCCCCCchHHHHHHhhhccccccCCCCCCCChh
Q 003384 622 NTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWPFV 700 (824)
Q Consensus 622 ~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELlt-G~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~ 700 (824)
.....++..|+|||++.++.++.++|||||||++|||++ |++||.................. ..+..
T Consensus 158 ------~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~------~~~~~ 225 (256)
T cd05112 158 ------STGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAGFRL------YKPRL 225 (256)
T ss_pred ------cCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCCCCC------CCCCC
Confidence 122335678999999998899999999999999999998 99999754432211111000011 11233
Q ss_pred hHHHHHHHHHHHhhhccCCCCChHHHHHHHH
Q 003384 701 QAEQLANLAMRCCEMSRKSRPELGKDVWRVL 731 (824)
Q Consensus 701 ~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~L 731 (824)
.+..+.+|+.+||+.+|.+||++ .++++.|
T Consensus 226 ~~~~~~~l~~~~l~~~p~~Rp~~-~~~l~~l 255 (256)
T cd05112 226 ASQSVYELMQHCWKERPEDRPSF-SLLLHQL 255 (256)
T ss_pred CCHHHHHHHHHHcccChhhCCCH-HHHHHhh
Confidence 45789999999999999999999 5565544
No 210
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=1.2e-34 Score=316.76 Aligned_cols=194 Identities=25% Similarity=0.396 Sum_probs=157.2
Q ss_pred cceeeecCceEEEEEEEC----CeEEEEEEecCCCCCCchhHHHHHHHHHhcCCCceeeEecccC----CceEEEEEecC
Q 003384 469 SLKIGEGGYGSIYKGLLR----HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP----EVWTLVYEYLP 540 (824)
Q Consensus 469 ~~~LG~G~fG~Vykg~~~----~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~----~~~~LV~Ey~~ 540 (824)
..+||+|+||.||+|... +..||+|.+.... ....+.+|+.+|+.++||||+++++++. ...++||||+.
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE 83 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC
Confidence 357999999999999864 3679999986542 2346789999999999999999999872 34789999985
Q ss_pred CCChhhhhhcc------CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEe----cCCCcceeeccccc
Q 003384 541 NGSLEDRLSCK------DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILL----DANFVSKLSDFGIS 610 (824)
Q Consensus 541 ggsL~~~L~~~------~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILl----d~~~~vKL~DFGla 610 (824)
++|.+++... .....++...+..++.|++.||.|||+ ++|+||||||+|||+ +.++.+||+|||++
T Consensus 84 -~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~---~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07868 84 -HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHA---NWVLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred -CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHh---CCEEcCCCCHHHEEEecCCCCcCcEEEeecCce
Confidence 5787776422 122358899999999999999999999 899999999999999 45689999999999
Q ss_pred cccccccccCCCccccccCCCCCCcccCChhhhccC-CCCcchhHHhHHHHHHHHHhCCCCCCC
Q 003384 611 RFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLTGRPALGI 673 (824)
Q Consensus 611 ~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~t~ksDVwSlGvvL~ELltG~~Pf~~ 673 (824)
+.+....... .......||+.|+|||++.+. .++.++|||||||++|+|+||++||..
T Consensus 160 ~~~~~~~~~~-----~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~ 218 (317)
T cd07868 160 RLFNSPLKPL-----ADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 218 (317)
T ss_pred eccCCCCccc-----cccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccC
Confidence 8764332111 111345689999999998774 589999999999999999999999963
No 211
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=1.3e-34 Score=315.73 Aligned_cols=248 Identities=23% Similarity=0.341 Sum_probs=188.9
Q ss_pred CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCC-CchhHHHHHHHHHhcCCCceeeEeccc--CCceEEEEEe
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEY 538 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIv~L~g~~--~~~~~LV~Ey 538 (824)
.+|...+.||+|+||.||+|... +..||+|.+...... ....+.+|+.+++.++||||+++++++ .+..++||||
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 85 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY 85 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence 46888899999999999999875 578999998754322 234678999999999999999999988 4568999999
Q ss_pred cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccc
Q 003384 539 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEI 618 (824)
Q Consensus 539 ~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~ 618 (824)
+++ +|.+++... ...+++..+..++.|++.||.|||+ ++|+||||||+|||++.++.+||+|||++........
T Consensus 86 ~~~-~l~~~~~~~--~~~~~~~~~~~~~~qi~~aL~~lH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 159 (309)
T cd07872 86 LDK-DLKQYMDDC--GNIMSMHNVKIFLYQILRGLAYCHR---RKVLHRDLKPQNLLINERGELKLADFGLARAKSVPTK 159 (309)
T ss_pred CCC-CHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEECccccceecCCCcc
Confidence 975 788877432 3457888999999999999999999 8999999999999999999999999999875432211
Q ss_pred cCCCccccccCCCCCCcccCChhhhcc-CCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhc---------ccc
Q 003384 619 SSNNTTLCCRTDPKGTFAYMDPEFLAS-GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGK---------LKN 688 (824)
Q Consensus 619 ~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~---------~~~ 688 (824)
. .....||+.|+|||++.+ ..++.++|||||||++|+|+||++||............-. +..
T Consensus 160 ~--------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (309)
T cd07872 160 T--------YSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPG 231 (309)
T ss_pred c--------cccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhh
Confidence 1 123457999999999865 4688999999999999999999999975433211100000 000
Q ss_pred c--------cC-CCC-----CCCChhhHHHHHHHHHHHhhhccCCCCChHH
Q 003384 689 L--------LD-PLA-----GDWPFVQAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 689 ~--------ld-~~~-----~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
+ .. +.. .......+..+.+|+.+|++.+|.+||++.+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e 282 (309)
T cd07872 232 ISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEE 282 (309)
T ss_pred hcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHH
Confidence 0 00 000 0001123557889999999999999999843
No 212
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=1.4e-34 Score=319.19 Aligned_cols=246 Identities=23% Similarity=0.287 Sum_probs=187.4
Q ss_pred CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCC---CCCchhHHHHHHHHHhcCCCceeeEecccC--CceEEEE
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS---LQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVY 536 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~---~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~ 536 (824)
++|...+.||+|+||.||++... +..||+|++.... ......+..|+.++..++||||+++++++. +..++||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 36888899999999999999876 4789999986421 112345788999999999999999999884 4688999
Q ss_pred EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccc
Q 003384 537 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQN 616 (824)
Q Consensus 537 Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~ 616 (824)
||++||+|.+++... ...+++..+..++.|++.||.|||+ ++|+||||||+|||++.++.+||+|||++..+...
T Consensus 81 Ey~~gg~L~~~l~~~--~~~l~~~~~~~~~~qi~~~L~~lH~---~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 155 (331)
T cd05624 81 DYYVGGDLLTLLSKF--EDRLPEDMARFYIAEMVLAIHSIHQ---LHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQD 155 (331)
T ss_pred eCCCCCcHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCchHHEEEcCCCCEEEEeccceeeccCC
Confidence 999999999999532 3468889999999999999999999 89999999999999999999999999999765433
Q ss_pred cccCCCccccccCCCCCCcccCChhhhcc-----CCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccC
Q 003384 617 EISSNNTTLCCRTDPKGTFAYMDPEFLAS-----GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLD 691 (824)
Q Consensus 617 ~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-----~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld 691 (824)
.... .....||+.|+|||++.+ +.++.++|||||||+||+|++|+.||..................+
T Consensus 156 ~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~- 227 (331)
T cd05624 156 GTVQ-------SSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERF- 227 (331)
T ss_pred Ccee-------eccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCcc-
Confidence 2110 122459999999999875 567889999999999999999999997654332211110000000
Q ss_pred CCCCCCChhhHHHHHHHHHHHhhhccCC--CCCh
Q 003384 692 PLAGDWPFVQAEQLANLAMRCCEMSRKS--RPEL 723 (824)
Q Consensus 692 ~~~~~~p~~~~~~l~~Li~~Cl~~~P~~--RPt~ 723 (824)
+. .......+..+.+++.+|+...+.+ |+++
T Consensus 228 ~~-p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~ 260 (331)
T cd05624 228 QF-PSHITDVSEEAKDLIQRLICSRERRLGQNGI 260 (331)
T ss_pred cC-CCccccCCHHHHHHHHHHccCchhhcCCCCH
Confidence 00 1111234578999999999865533 3455
No 213
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1e-34 Score=323.66 Aligned_cols=242 Identities=29% Similarity=0.459 Sum_probs=204.0
Q ss_pred cCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCC---chhHHHHHHHHHhcC-CCceeeEecccC--CceEE
Q 003384 463 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG---PSEFQQEIDILSKIR-HPNLVTLVGACP--EVWTL 534 (824)
Q Consensus 463 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~---~~~f~~Ei~iL~~l~-HpnIv~L~g~~~--~~~~L 534 (824)
...|.+.+.||.|.||.||+++.. +..+|+|++.+..... ...+.+|+.||+++. |||||.++++|. ...++
T Consensus 34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~l 113 (382)
T KOG0032|consen 34 KEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYL 113 (382)
T ss_pred cccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEE
Confidence 446888899999999999999876 5789999998765543 358999999999998 999999999995 46799
Q ss_pred EEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecC----CCcceeeccccc
Q 003384 535 VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDA----NFVSKLSDFGIS 610 (824)
Q Consensus 535 V~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~----~~~vKL~DFGla 610 (824)
|||+|.||.|.+.+... .+++.....++.+++.++.|||+ .||+||||||+|+|+.. ++.+|++|||++
T Consensus 114 vmEL~~GGeLfd~i~~~----~~sE~da~~~~~~il~av~~lH~---~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla 186 (382)
T KOG0032|consen 114 VMELCEGGELFDRIVKK----HYSERDAAGIIRQILEAVKYLHS---LGVVHRDLKPENLLLASKDEGSGRIKLIDFGLA 186 (382)
T ss_pred EEEecCCchHHHHHHHc----cCCHHHHHHHHHHHHHHHHHHHh---CCceeccCCHHHeeeccccCCCCcEEEeeCCCc
Confidence 99999999999999655 39999999999999999999999 89999999999999953 358999999999
Q ss_pred cccccccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHH--hhhcccc
Q 003384 611 RFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYAL--DTGKLKN 688 (824)
Q Consensus 611 ~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~--~~~~~~~ 688 (824)
........ ....+||+.|+|||++....|+..+||||+||++|.|++|.+||.......... ..+.+
T Consensus 187 ~~~~~~~~---------~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~-- 255 (382)
T KOG0032|consen 187 KFIKPGER---------LHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDF-- 255 (382)
T ss_pred eEccCCce---------EeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCC--
Confidence 98765211 145679999999999999999999999999999999999999998776544332 23322
Q ss_pred ccCCCCCCCChhhHHHHHHHHHHHhhhccCCCCChHH
Q 003384 689 LLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 689 ~ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
+.....|+. .+..+.+++..|+..+|..|+++.+
T Consensus 256 --~f~~~~w~~-is~~akd~i~~ll~~dp~~R~ta~~ 289 (382)
T KOG0032|consen 256 --DFTSEPWDD-ISESAKDFIRKLLEFDPRKRLTAAQ 289 (382)
T ss_pred --CCCCCCccc-cCHHHHHHHHHhcccCcccCCCHHH
Confidence 334445553 4789999999999999999999943
No 214
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1e-34 Score=315.11 Aligned_cols=243 Identities=25% Similarity=0.381 Sum_probs=196.5
Q ss_pred CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCCchhHHHHHHHHHhcCCCceeeEecccC--CceEEEEEec
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYL 539 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~Ey~ 539 (824)
.+|...+.||.|+||.||+|... +..||+|.+..........+.+|+.+++.++||||++++++|. +..++||||+
T Consensus 19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 98 (297)
T cd06656 19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL 98 (297)
T ss_pred hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeeccc
Confidence 47888999999999999999864 6889999997655555567889999999999999999999884 4689999999
Q ss_pred CCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccccccc
Q 003384 540 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEIS 619 (824)
Q Consensus 540 ~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~ 619 (824)
++++|.+++. ...+++..+..++.+++.||.|||+ .+++||||||+|||++.++.+||+|||++.........
T Consensus 99 ~~~~L~~~~~----~~~~~~~~~~~~~~~l~~~L~~LH~---~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~~ 171 (297)
T cd06656 99 AGGSLTDVVT----ETCMDEGQIAAVCRECLQALDFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK 171 (297)
T ss_pred CCCCHHHHHH----hCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEECcCccceEccCCccC
Confidence 9999999884 2357889999999999999999999 89999999999999999999999999998765432211
Q ss_pred CCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCCCCCh
Q 003384 620 SNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPF 699 (824)
Q Consensus 620 ~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~ 699 (824)
.....|++.|+|||.+.+..++.++|||||||++|+|++|.+||.............. ........+.
T Consensus 172 --------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~----~~~~~~~~~~ 239 (297)
T cd06656 172 --------RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIAT----NGTPELQNPE 239 (297)
T ss_pred --------cCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeecc----CCCCCCCCcc
Confidence 1234588999999999988899999999999999999999999965443221111000 0001111233
Q ss_pred hhHHHHHHHHHHHhhhccCCCCChHH
Q 003384 700 VQAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 700 ~~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
..+..+.+++.+||..+|.+||++.+
T Consensus 240 ~~~~~~~~li~~~l~~~p~~Rps~~~ 265 (297)
T cd06656 240 RLSAVFRDFLNRCLEMDVDRRGSAKE 265 (297)
T ss_pred ccCHHHHHHHHHHccCChhhCcCHHH
Confidence 45567899999999999999999943
No 215
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=1.5e-34 Score=306.67 Aligned_cols=249 Identities=29% Similarity=0.515 Sum_probs=199.0
Q ss_pred CCCCccceeeecCceEEEEEEEC-CeEEEEEEecCCCCCCchhHHHHHHHHHhcCCCceeeEecccC-CceEEEEEecCC
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP-EVWTLVYEYLPN 541 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~~-~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~-~~~~LV~Ey~~g 541 (824)
..|...++||+|+||.||+|.+. +..+|+|.+.... .....+.+|+.+++.++|+||+++++.+. ...++||||+++
T Consensus 6 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~v~e~~~~ 84 (260)
T cd05073 6 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIITEFMAK 84 (260)
T ss_pred cceeEEeEecCccceEEEEEEecCCccEEEEecCCCh-hHHHHHHHHHHHHHhcCCCCcceEEEEEcCCCeEEEEEeCCC
Confidence 46888899999999999999865 4679999887542 23457889999999999999999999874 457899999999
Q ss_pred CChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccccCC
Q 003384 542 GSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSN 621 (824)
Q Consensus 542 gsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~~~ 621 (824)
|+|.+++.... ...+++..+..++.+++.||.|||. .|++||||||+||+++.++.+||+|||++..+.......
T Consensus 85 ~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~aL~~lH~---~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~- 159 (260)
T cd05073 85 GSLLDFLKSDE-GSKQPLPKLIDFSAQIAEGMAFIEQ---RNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTA- 159 (260)
T ss_pred CcHHHHHHhCC-ccccCHHHHHHHHHHHHHHHHHHHh---CCccccccCcceEEEcCCCcEEECCCcceeeccCCCccc-
Confidence 99999986432 3468889999999999999999999 789999999999999999999999999997654322111
Q ss_pred CccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHh-CCCCCCCchHHH--HHHhhhccccccCCCCCCCC
Q 003384 622 NTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQ--YALDTGKLKNLLDPLAGDWP 698 (824)
Q Consensus 622 ~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELlt-G~~Pf~~~~~~~--~~~~~~~~~~~ld~~~~~~p 698 (824)
.....++..|+|||++....++.++|||||||++|+|+| |++||....... ..+..+. ....+
T Consensus 160 ------~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~--------~~~~~ 225 (260)
T cd05073 160 ------REGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGY--------RMPRP 225 (260)
T ss_pred ------ccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCC--------CCCCc
Confidence 122346788999999998889999999999999999999 999997543321 1111111 11122
Q ss_pred hhhHHHHHHHHHHHhhhccCCCCChHHHHHHHHHH
Q 003384 699 FVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEP 733 (824)
Q Consensus 699 ~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le~ 733 (824)
...+..+.+++.+|++.+|.+||++ ..+...|+.
T Consensus 226 ~~~~~~~~~~i~~~l~~~p~~Rp~~-~~l~~~L~~ 259 (260)
T cd05073 226 ENCPEELYNIMMRCWKNRPEERPTF-EYIQSVLDD 259 (260)
T ss_pred ccCCHHHHHHHHHHcccCcccCcCH-HHHHHHHhc
Confidence 3445689999999999999999999 667676653
No 216
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=5.7e-35 Score=313.34 Aligned_cols=234 Identities=26% Similarity=0.402 Sum_probs=179.8
Q ss_pred eeeecCceEEEEEEEC--------------------------CeEEEEEEecCCCCCCchhHHHHHHHHHhcCCCceeeE
Q 003384 471 KIGEGGYGSIYKGLLR--------------------------HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTL 524 (824)
Q Consensus 471 ~LG~G~fG~Vykg~~~--------------------------~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIv~L 524 (824)
.||+|+||.||+|.+. ...|++|++..........|.+|+.+++.++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 5999999999999742 13589999865433333568889999999999999999
Q ss_pred ecccC--CceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCC--
Q 003384 525 VGACP--EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANF-- 600 (824)
Q Consensus 525 ~g~~~--~~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~-- 600 (824)
+|+|. ...++||||+++|+|..++.. ....+++..+..++.|++.||.|||+ ++|+||||||+|||++..+
T Consensus 82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~--~~~~~~~~~~~~i~~qi~~~l~~lH~---~~iiH~dlkp~Nill~~~~~~ 156 (274)
T cd05076 82 HGVCVRGSENIMVEEFVEHGPLDVCLRK--EKGRVPVAWKITVAQQLASALSYLED---KNLVHGNVCAKNILLARLGLA 156 (274)
T ss_pred EEEEEeCCceEEEEecCCCCcHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHc---CCccCCCCCcccEEEeccCcc
Confidence 99984 467899999999999998853 23468899999999999999999999 8999999999999997644
Q ss_pred -----cceeeccccccccccccccCCCccccccCCCCCCcccCChhhhcc-CCCCcchhHHhHHHHHHHHH-hCCCCCCC
Q 003384 601 -----VSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLAS-GELTPKSDVYSFGIILLRLL-TGRPALGI 673 (824)
Q Consensus 601 -----~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~t~ksDVwSlGvvL~ELl-tG~~Pf~~ 673 (824)
.+||+|||++...... ....++..|+|||.+.+ ..++.++|||||||++|||+ +|++||..
T Consensus 157 ~~~~~~~kl~d~g~~~~~~~~------------~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~ 224 (274)
T cd05076 157 EGTSPFIKLSDPGVSFTALSR------------EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKE 224 (274)
T ss_pred cCccceeeecCCccccccccc------------cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccc
Confidence 4799999987643211 12347888999998875 56899999999999999995 79999965
Q ss_pred chHHHHHHhhhccccccCCCCCCCChhhHHHHHHHHHHHhhhccCCCCChHHHHHHH
Q 003384 674 TKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRV 730 (824)
Q Consensus 674 ~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~ 730 (824)
........... . . ...+......+.+++.+||+.+|.+||++ .++++.
T Consensus 225 ~~~~~~~~~~~---~-~----~~~~~~~~~~~~~li~~cl~~~p~~Rps~-~~il~~ 272 (274)
T cd05076 225 RTPSEKERFYE---K-K----HRLPEPSCKELATLISQCLTYEPTQRPSF-RTILRD 272 (274)
T ss_pred cChHHHHHHHH---h-c----cCCCCCCChHHHHHHHHHcccChhhCcCH-HHHHHh
Confidence 43221110000 0 0 01112223578999999999999999999 555443
No 217
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=8.8e-35 Score=312.13 Aligned_cols=240 Identities=26% Similarity=0.354 Sum_probs=186.9
Q ss_pred CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC-CCchhHHHHHHHHHhcCCCceeeEeccc--CCceEEEEEec
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYL 539 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l~HpnIv~L~g~~--~~~~~LV~Ey~ 539 (824)
+|...++||+|+||.||+|... +..||+|++..... .....+.+|+.++++++||||++++++| .+..++||||+
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 81 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFM 81 (279)
T ss_pred cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecC
Confidence 5677889999999999999874 57899999865422 2234688999999999999999999987 45688999999
Q ss_pred CCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccccccc
Q 003384 540 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEIS 619 (824)
Q Consensus 540 ~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~ 619 (824)
++|+|..+. .+++..+..++.+++.||.|||+ .||+|+||||+|||++.++.+||+|||++..+....
T Consensus 82 ~~~~l~~~~-------~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~-- 149 (279)
T cd06619 82 DGGSLDVYR-------KIPEHVLGRIAVAVVKGLTYLWS---LKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSI-- 149 (279)
T ss_pred CCCChHHhh-------cCCHHHHHHHHHHHHHHHHHHHH---CCEeeCCCCHHHEEECCCCCEEEeeCCcceeccccc--
Confidence 999986542 46788899999999999999999 899999999999999999999999999987653221
Q ss_pred CCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHH-HHhhhccccccCCCCCCC-
Q 003384 620 SNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQY-ALDTGKLKNLLDPLAGDW- 697 (824)
Q Consensus 620 ~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~-~~~~~~~~~~ld~~~~~~- 697 (824)
.....||..|+|||++.+..++.++|||||||++|+|++|+.||........ ...........+......
T Consensus 150 --------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (279)
T cd06619 150 --------AKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLP 221 (279)
T ss_pred --------ccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCCCC
Confidence 1234689999999999988999999999999999999999999954211000 000000111111111111
Q ss_pred ChhhHHHHHHHHHHHhhhccCCCCChH
Q 003384 698 PFVQAEQLANLAMRCCEMSRKSRPELG 724 (824)
Q Consensus 698 p~~~~~~l~~Li~~Cl~~~P~~RPt~~ 724 (824)
....+..+.+++.+|++.+|.+||++.
T Consensus 222 ~~~~~~~~~~li~~~l~~~P~~Rp~~~ 248 (279)
T cd06619 222 VGQFSEKFVHFITQCMRKQPKERPAPE 248 (279)
T ss_pred CCcCCHHHHHHHHHHhhCChhhCCCHH
Confidence 122456799999999999999999984
No 218
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=1e-34 Score=308.62 Aligned_cols=246 Identities=25% Similarity=0.451 Sum_probs=192.9
Q ss_pred eeeecCceEEEEEEECC--------eEEEEEEecCCC-CCCchhHHHHHHHHHhcCCCceeeEecccC--CceEEEEEec
Q 003384 471 KIGEGGYGSIYKGLLRH--------MQVAIKMLHPHS-LQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYL 539 (824)
Q Consensus 471 ~LG~G~fG~Vykg~~~~--------~~VAvK~l~~~~-~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~Ey~ 539 (824)
.||+|+||.||+|.... ..||||.+.... ......+.+|+.+++.++||||++++++|. +..++||||+
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (269)
T cd05044 2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMELM 81 (269)
T ss_pred ccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEecc
Confidence 59999999999998653 569999876532 123457889999999999999999999884 4689999999
Q ss_pred CCCChhhhhhccC----CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCC-----cceeeccccc
Q 003384 540 PNGSLEDRLSCKD----NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANF-----VSKLSDFGIS 610 (824)
Q Consensus 540 ~ggsL~~~L~~~~----~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~-----~vKL~DFGla 610 (824)
++|+|.+++.... ....+++..++.++.+++.||.|||+ .+++|+||||+|||++.++ .+||+|||++
T Consensus 82 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~ 158 (269)
T cd05044 82 EGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQ---MHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLA 158 (269)
T ss_pred CCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHh---CCcccCCCChheEEEecCCCCCCcceEECCcccc
Confidence 9999999986432 23458899999999999999999998 7899999999999999877 8999999999
Q ss_pred cccccccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHh-CCCCCCCchHHHHHHhhhccccc
Q 003384 611 RFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNL 689 (824)
Q Consensus 611 ~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELlt-G~~Pf~~~~~~~~~~~~~~~~~~ 689 (824)
........... .....++..|+|||++.++.++.++|||||||++|+|+| |+.||.............
T Consensus 159 ~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~----- 227 (269)
T cd05044 159 RDIYKSDYYRK------EGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVT----- 227 (269)
T ss_pred ccccccccccc------CcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHh-----
Confidence 86543321111 123346789999999999999999999999999999998 999997544322211110
Q ss_pred cCCCCCCCChhhHHHHHHHHHHHhhhccCCCCChHHHHHHHHH
Q 003384 690 LDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLE 732 (824)
Q Consensus 690 ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le 732 (824)
.......+...+..+.+++.+||..+|.+||++ +.+.+.|+
T Consensus 228 -~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~-~~i~~~l~ 268 (269)
T cd05044 228 -AGGRLQKPENCPDKIYQLMTNCWAQDPSERPTF-DRIQEILQ 268 (269)
T ss_pred -cCCccCCcccchHHHHHHHHHHcCCCcccCCCH-HHHHHHHh
Confidence 001112234456789999999999999999999 66666654
No 219
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.9e-34 Score=318.06 Aligned_cols=259 Identities=24% Similarity=0.384 Sum_probs=201.7
Q ss_pred CCCCccceeeecCceEEEEEEECC---------eEEEEEEecCCCC-CCchhHHHHHHHHHhc-CCCceeeEecccC--C
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLLRH---------MQVAIKMLHPHSL-QGPSEFQQEIDILSKI-RHPNLVTLVGACP--E 530 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~~~---------~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l-~HpnIv~L~g~~~--~ 530 (824)
.+|.+.+.||+|+||.||++...+ ..||+|.+..... .....+.+|+.+++++ +||||++++++|. .
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 91 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCC
Confidence 368888999999999999997521 3689998875322 2245788999999999 7999999999884 3
Q ss_pred ceEEEEEecCCCChhhhhhccC-------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEec
Q 003384 531 VWTLVYEYLPNGSLEDRLSCKD-------------NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLD 597 (824)
Q Consensus 531 ~~~LV~Ey~~ggsL~~~L~~~~-------------~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld 597 (824)
..++||||+++|+|.+++.... ....+++..++.++.|++.||.|||. +||+||||||+|||++
T Consensus 92 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~---~givH~dlkp~Nill~ 168 (334)
T cd05100 92 PLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLAS---QKCIHRDLAARNVLVT 168 (334)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHH---CCeeccccccceEEEc
Confidence 5789999999999999986432 12358889999999999999999999 8999999999999999
Q ss_pred CCCcceeeccccccccccccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHh-CCCCCCCchH
Q 003384 598 ANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKE 676 (824)
Q Consensus 598 ~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELlt-G~~Pf~~~~~ 676 (824)
.++.+||+|||+++.......... .....++..|+|||++.+..++.++|||||||++|||++ |.+||.....
T Consensus 169 ~~~~~kL~Dfg~~~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~ 242 (334)
T cd05100 169 EDNVMKIADFGLARDVHNIDYYKK------TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPV 242 (334)
T ss_pred CCCcEEECCcccceeccccccccc------ccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCH
Confidence 999999999999986543221100 122345678999999999999999999999999999998 8899975443
Q ss_pred HHHHHhhhccccccCCCCCCCChhhHHHHHHHHHHHhhhccCCCCChHHHHHHHHHHHHhhC
Q 003384 677 VQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRASC 738 (824)
Q Consensus 677 ~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le~l~~~~ 738 (824)
....... ........+...+..+.+++.+||+.+|.+||++ .+++..|+.+....
T Consensus 243 ~~~~~~~------~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~-~ell~~l~~~~~~~ 297 (334)
T cd05100 243 EELFKLL------KEGHRMDKPANCTHELYMIMRECWHAVPSQRPTF-KQLVEDLDRVLTVT 297 (334)
T ss_pred HHHHHHH------HcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCH-HHHHHHHHHHhhhc
Confidence 2211110 0111112233456689999999999999999999 77778888776543
No 220
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=8.3e-35 Score=311.21 Aligned_cols=259 Identities=26% Similarity=0.441 Sum_probs=199.3
Q ss_pred CCCccceeeecCceEEEEEEEC------CeEEEEEEecCCCCC-CchhHHHHHHHHHhcCCCceeeEecccCC----ceE
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR------HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACPE----VWT 533 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~------~~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIv~L~g~~~~----~~~ 533 (824)
.|...+.||+|+||.||+|.+. +..||||++...... ....|.+|+.+++.+.||||+++++++.. ..+
T Consensus 5 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~ 84 (284)
T cd05038 5 HLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLR 84 (284)
T ss_pred hchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCceE
Confidence 4667788999999999999864 468999998765432 34579999999999999999999998743 578
Q ss_pred EEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccc
Q 003384 534 LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFL 613 (824)
Q Consensus 534 LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~ 613 (824)
+||||+++++|.+++... ...+++..+..++.+++.||.|||. ++++||||||+|||++.++.+||+|||++...
T Consensus 85 lv~e~~~~~~l~~~l~~~--~~~~~~~~~~~~~~~l~~aL~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 159 (284)
T cd05038 85 LIMEYLPSGSLRDYLQRH--RDQINLKRLLLFSSQICKGMDYLGS---QRYIHRDLAARNILVESEDLVKISDFGLAKVL 159 (284)
T ss_pred EEEecCCCCCHHHHHHhC--ccccCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHhEEEcCCCCEEEccccccccc
Confidence 999999999999999533 2358999999999999999999999 89999999999999999999999999999876
Q ss_pred ccccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHH--------Hhhhc
Q 003384 614 SQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYA--------LDTGK 685 (824)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~--------~~~~~ 685 (824)
........ ......++..|+|||.+.+..++.++|||||||++|||+||..||......... .....
T Consensus 160 ~~~~~~~~-----~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 234 (284)
T cd05038 160 PEDKDYYY-----VKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTR 234 (284)
T ss_pred ccCCccee-----ccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHH
Confidence 53221110 011234567899999998889999999999999999999999988543211100 00000
Q ss_pred cccccC-CCCCCCChhhHHHHHHHHHHHhhhccCCCCChHHHHHHHHHHH
Q 003384 686 LKNLLD-PLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM 734 (824)
Q Consensus 686 ~~~~ld-~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le~l 734 (824)
+...+. ......+...+..+.+++.+||+.+|.+||++ .+|+++|+.+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~-~ei~~~l~~i 283 (284)
T cd05038 235 LLELLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSF-ADLILIVDRL 283 (284)
T ss_pred HHHHHHcCCcCCCCccCCHHHHHHHHHHhccChhhCCCH-HHHHHHHhhc
Confidence 001110 01111223345789999999999999999999 7777777654
No 221
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=1.2e-34 Score=305.82 Aligned_cols=234 Identities=29% Similarity=0.468 Sum_probs=184.1
Q ss_pred eeeecCceEEEEEEECCe------------EEEEEEecCCCCCCchhHHHHHHHHHhcCCCceeeEecccC-CceEEEEE
Q 003384 471 KIGEGGYGSIYKGLLRHM------------QVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP-EVWTLVYE 537 (824)
Q Consensus 471 ~LG~G~fG~Vykg~~~~~------------~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~-~~~~LV~E 537 (824)
.||+|+||.||+|.+... .|++|.+...... ...|.+|+.+++.++||||++++|+|. ...++|||
T Consensus 2 ~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~lv~e 80 (259)
T cd05037 2 HLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVRDENIMVEE 80 (259)
T ss_pred cccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEecCCcEEEEE
Confidence 599999999999988643 3788887654332 567999999999999999999999874 56789999
Q ss_pred ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCC-------cceeeccccc
Q 003384 538 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANF-------VSKLSDFGIS 610 (824)
Q Consensus 538 y~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~-------~vKL~DFGla 610 (824)
|+++|+|.+++.... ..+++..++.++.|++.||.|||. ++|+||||||+|||++.++ .+||+|||++
T Consensus 81 ~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a 155 (259)
T cd05037 81 YVKFGPLDVFLHREK--NNVSLHWKLDVAKQLASALHYLED---KKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIP 155 (259)
T ss_pred cCCCCcHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHhh---CCeecccCccceEEEecCccccCCceeEEeCCCCcc
Confidence 999999999985432 268899999999999999999999 8999999999999999887 7999999998
Q ss_pred cccccccccCCCccccccCCCCCCcccCChhhhccC--CCCcchhHHhHHHHHHHHHh-CCCCCCCchHHHHHHhhhccc
Q 003384 611 RFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG--ELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLK 687 (824)
Q Consensus 611 ~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~--~~t~ksDVwSlGvvL~ELlt-G~~Pf~~~~~~~~~~~~~~~~ 687 (824)
...... ....++..|+|||++.+. .++.++|||||||++|+|++ |..||.............
T Consensus 156 ~~~~~~------------~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~--- 220 (259)
T cd05037 156 ITVLSR------------EERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQ--- 220 (259)
T ss_pred cccccc------------cccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHHh---
Confidence 765331 123467889999999876 78999999999999999999 577885442211110000
Q ss_pred cccCCCCCCCChhhHHHHHHHHHHHhhhccCCCCChHHHHHHHH
Q 003384 688 NLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVL 731 (824)
Q Consensus 688 ~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~L 731 (824)
.. ...+......+.+++.+||..+|.+||++ .++++.|
T Consensus 221 ---~~--~~~~~~~~~~~~~li~~~l~~~p~~Rpt~-~~il~~l 258 (259)
T cd05037 221 ---DQ--HRLPMPDCAELANLINQCWTYDPTKRPSF-RAILRDL 258 (259)
T ss_pred ---cC--CCCCCCCchHHHHHHHHHhccChhhCCCH-HHHHHhc
Confidence 00 11112223689999999999999999999 4554443
No 222
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=1.8e-34 Score=311.50 Aligned_cols=244 Identities=24% Similarity=0.360 Sum_probs=192.6
Q ss_pred CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCCchhHHHHHHHHHhcCCCceeeEeccc--CCceEEEEEec
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYL 539 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~--~~~~~LV~Ey~ 539 (824)
+.|++.++||.|+||.||+|... +..|++|.+..........+.+|+.+++.++||||+++++++ ....++||||+
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 91 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFC 91 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecC
Confidence 46888899999999999999875 478999998765444456788999999999999999999987 45689999999
Q ss_pred CCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccccccc
Q 003384 540 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEIS 619 (824)
Q Consensus 540 ~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~ 619 (824)
++++|..++... ...+++..+..++.|++.||.|||. ++++||||||+|||++.++.+||+|||++.........
T Consensus 92 ~~~~l~~~~~~~--~~~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~ 166 (292)
T cd06644 92 PGGAVDAIMLEL--DRGLTEPQIQVICRQMLEALQYLHS---MKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQR 166 (292)
T ss_pred CCCcHHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHhc---CCeeecCCCcceEEEcCCCCEEEccCccceeccccccc
Confidence 999998877432 3468999999999999999999999 89999999999999999999999999998754322110
Q ss_pred CCCccccccCCCCCCcccCChhhhc-----cCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCC
Q 003384 620 SNNTTLCCRTDPKGTFAYMDPEFLA-----SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLA 694 (824)
Q Consensus 620 ~~~~~~~~~~~~~GT~~Y~APE~l~-----~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~ 694 (824)
.....|++.|+|||++. ...++.++|||||||++|+|++|.+||............. ....+ .
T Consensus 167 --------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~---~~~~~-~ 234 (292)
T cd06644 167 --------RDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIA---KSEPP-T 234 (292)
T ss_pred --------cceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHh---cCCCc-c
Confidence 12345889999999985 3457889999999999999999999997654322211111 11111 1
Q ss_pred CCCChhhHHHHHHHHHHHhhhccCCCCChH
Q 003384 695 GDWPFVQAEQLANLAMRCCEMSRKSRPELG 724 (824)
Q Consensus 695 ~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~ 724 (824)
...+...+..+.+++.+||..+|.+||++.
T Consensus 235 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ 264 (292)
T cd06644 235 LSQPSKWSMEFRDFLKTALDKHPETRPSAA 264 (292)
T ss_pred CCCCcccCHHHHHHHHHHhcCCcccCcCHH
Confidence 111233456889999999999999999984
No 223
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=2e-34 Score=307.81 Aligned_cols=240 Identities=28% Similarity=0.371 Sum_probs=194.4
Q ss_pred CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCC-CCCchhHHHHHHHHHhcCCCceeeEecccC--CceEEEEEec
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS-LQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYL 539 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~-~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~Ey~ 539 (824)
+|...+.||.|+||.||+|... +..||+|++.... ......+.+|+.+++.++||||+++++++. ...++|+||+
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (274)
T cd06609 2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYC 81 (274)
T ss_pred hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEee
Confidence 5777889999999999999875 5789999987543 223456889999999999999999999874 4688999999
Q ss_pred CCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccccccc
Q 003384 540 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEIS 619 (824)
Q Consensus 540 ~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~ 619 (824)
++++|.+++.. .++++..+..++.|++.||.|||. ++++||||+|+||+++.++.++|+|||+++.+......
T Consensus 82 ~~~~L~~~~~~----~~~~~~~~~~~~~ql~~~l~~lh~---~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~ 154 (274)
T cd06609 82 GGGSCLDLLKP----GKLDETYIAFILREVLLGLEYLHE---EGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSK 154 (274)
T ss_pred CCCcHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEEcccccceeecccccc
Confidence 99999999842 278999999999999999999999 88999999999999999999999999999876543211
Q ss_pred CCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCCCCCh
Q 003384 620 SNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPF 699 (824)
Q Consensus 620 ~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~ 699 (824)
.....|++.|+|||++.+..++.++|||||||++|+|+||++||............ .....+ ..+.
T Consensus 155 --------~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~---~~~~~~---~~~~ 220 (274)
T cd06609 155 --------RNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLI---PKNNPP---SLEG 220 (274)
T ss_pred --------cccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHh---hhcCCC---CCcc
Confidence 12345889999999999888999999999999999999999999755432211111 011111 1111
Q ss_pred h-hHHHHHHHHHHHhhhccCCCCChHH
Q 003384 700 V-QAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 700 ~-~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
. .+..+.+++.+||..+|.+||++.+
T Consensus 221 ~~~~~~~~~~l~~~l~~~p~~Rpt~~~ 247 (274)
T cd06609 221 NKFSKPFKDFVSLCLNKDPKERPSAKE 247 (274)
T ss_pred cccCHHHHHHHHHHhhCChhhCcCHHH
Confidence 2 4568999999999999999999843
No 224
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=2.1e-34 Score=303.79 Aligned_cols=241 Identities=24% Similarity=0.357 Sum_probs=194.7
Q ss_pred CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC--CCchhHHHHHHHHHhcCCCceeeEecccC--C-ceEEEEE
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVGACP--E-VWTLVYE 537 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~--~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~-~~~LV~E 537 (824)
+|...+.||.|+||.||++... +..||+|.+..... .....+.+|+.++++++|||++++++.+. + ..++|||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 4778899999999999999875 47899999865432 22346889999999999999999998763 2 4689999
Q ss_pred ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccccc
Q 003384 538 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNE 617 (824)
Q Consensus 538 y~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~ 617 (824)
|+++++|.+++... ...++++.++..++.+++.||.+||+ ++++||||||+||+++.++.++|+|||++..+....
T Consensus 81 ~~~~~~l~~~l~~~-~~~~l~~~~~~~~~~~l~~~l~~lH~---~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~ 156 (257)
T cd08223 81 FCEGGDLYHKLKEQ-KGKLLPENQVVEWFVQIAMALQYLHE---KHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQC 156 (257)
T ss_pred ccCCCcHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCchhEEEecCCcEEEecccceEEecccC
Confidence 99999999998542 23468999999999999999999999 899999999999999999999999999998664322
Q ss_pred ccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHH--HHhhhccccccCCCCC
Q 003384 618 ISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQY--ALDTGKLKNLLDPLAG 695 (824)
Q Consensus 618 ~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~--~~~~~~~~~~ld~~~~ 695 (824)
.. .....|++.|+|||++.+..++.++|||||||++|+|++|+.||...+.... ....+. + .
T Consensus 157 ~~--------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~----~----~ 220 (257)
T cd08223 157 DM--------ASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGK----L----P 220 (257)
T ss_pred Cc--------cccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcC----C----C
Confidence 11 1234589999999999999999999999999999999999999975543221 111111 1 1
Q ss_pred CCChhhHHHHHHHHHHHhhhccCCCCChHH
Q 003384 696 DWPFVQAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 696 ~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
..+...+..+.+++.+|++.+|.+||++.+
T Consensus 221 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ 250 (257)
T cd08223 221 PMPKDYSPELGELIATMLSKRPEKRPSVKS 250 (257)
T ss_pred CCccccCHHHHHHHHHHhccCcccCCCHHH
Confidence 223345678999999999999999999843
No 225
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=4e-34 Score=304.37 Aligned_cols=245 Identities=26% Similarity=0.405 Sum_probs=192.4
Q ss_pred CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCC-----CchhHHHHHHHHHhcCCCceeeEecccC----Cce
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ-----GPSEFQQEIDILSKIRHPNLVTLVGACP----EVW 532 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~-----~~~~f~~Ei~iL~~l~HpnIv~L~g~~~----~~~ 532 (824)
.+|...+.||+|+||.||+|... +..||+|.+...... ....+.+|+.+++.++||||+++++++. ...
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 47888999999999999999864 578999988654321 1235888999999999999999999873 357
Q ss_pred EEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccc
Q 003384 533 TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRF 612 (824)
Q Consensus 533 ~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~ 612 (824)
+++|||+++++|.+++.. ...+++.....++.+++.||.|||. .+|+||||||+||+++.++.+||+|||++..
T Consensus 82 ~l~~e~~~~~~L~~~l~~---~~~l~~~~~~~~~~qi~~~l~~LH~---~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~ 155 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKA---YGALTESVTRKYTRQILEGMSYLHS---NMIVHRDIKGANILRDSAGNVKLGDFGASKR 155 (266)
T ss_pred EEEEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEECCCCCEEEccCCCccc
Confidence 899999999999999853 3458899999999999999999998 7899999999999999999999999999886
Q ss_pred cccccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCC
Q 003384 613 LSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDP 692 (824)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~ 692 (824)
+......... .....|+..|+|||++.+..++.++|||||||++|+|++|++||............. ..+
T Consensus 156 ~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~-----~~~ 225 (266)
T cd06651 156 LQTICMSGTG-----IRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIA-----TQP 225 (266)
T ss_pred cccccccCCc-----cccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHHh-----cCC
Confidence 5432111100 123458999999999998889999999999999999999999997554332221111 111
Q ss_pred CCCCCChhhHHHHHHHHHHHhhhccCCCCChHH
Q 003384 693 LAGDWPFVQAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 693 ~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
.....|......+..++ +||..+|.+||++.+
T Consensus 226 ~~~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~e 257 (266)
T cd06651 226 TNPQLPSHISEHARDFL-GCIFVEARHRPSAEE 257 (266)
T ss_pred CCCCCchhcCHHHHHHH-HHhcCChhhCcCHHH
Confidence 12233444556777887 788899999999943
No 226
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=7e-36 Score=337.95 Aligned_cols=269 Identities=27% Similarity=0.458 Sum_probs=215.7
Q ss_pred ccCCCChhhHhhhcCC---------CCccceeeecCceEEEEEEEC--C---eEEEEEEecCCCC-CCchhHHHHHHHHH
Q 003384 450 FFSDFSFSEIEGATHN---------FDPSLKIGEGGYGSIYKGLLR--H---MQVAIKMLHPHSL-QGPSEFQQEIDILS 514 (824)
Q Consensus 450 ~~~~~~~~ei~~~~~~---------f~~~~~LG~G~fG~Vykg~~~--~---~~VAvK~l~~~~~-~~~~~f~~Ei~iL~ 514 (824)
....+++++-..+... ..+.++||.|.||+||+|.++ + ..||||.++.... ....+|..|+.||.
T Consensus 606 YiDP~TYEDPnqAvreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMG 685 (996)
T KOG0196|consen 606 YIDPHTYEDPNQAVREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMG 685 (996)
T ss_pred ecCCccccCccHHHHHhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcc
Confidence 3344555554444333 345678999999999999876 2 5699999987533 33567999999999
Q ss_pred hcCCCceeeEecccC--CceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCC
Q 003384 515 KIRHPNLVTLVGACP--EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPA 592 (824)
Q Consensus 515 ~l~HpnIv~L~g~~~--~~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~ 592 (824)
+++||||++|.|+.. ....||.|||++|+|+.+|..++ +.|++.+..-++.+||.|+.||-. +++|||||...
T Consensus 686 QFdHPNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~D--GqftviQLVgMLrGIAsGMkYLsd---m~YVHRDLAAR 760 (996)
T KOG0196|consen 686 QFDHPNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQND--GQFTVIQLVGMLRGIASGMKYLSD---MNYVHRDLAAR 760 (996)
T ss_pred cCCCCcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhcC--CceEeehHHHHHHHHHHHhHHHhh---cCchhhhhhhh
Confidence 999999999999884 45789999999999999997554 559999999999999999999999 89999999999
Q ss_pred cEEecCCCcceeeccccccccccccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHh-CCCCC
Q 003384 593 NILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPAL 671 (824)
Q Consensus 593 NILld~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELlt-G~~Pf 671 (824)
|||++.|..+|++||||++.+.++... ...+ .+..-..+|.|||.+....++.++|||||||||||.++ |..|+
T Consensus 761 NILVNsnLvCKVsDFGLSRvledd~~~-~ytt----~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPY 835 (996)
T KOG0196|consen 761 NILVNSNLVCKVSDFGLSRVLEDDPEA-AYTT----LGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPY 835 (996)
T ss_pred heeeccceEEEeccccceeecccCCCc-cccc----cCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcc
Confidence 999999999999999999988665411 1111 22334679999999999999999999999999999886 88887
Q ss_pred CCc-h-HHHHHHhhhccccccCCCCCCCChhhHHHHHHHHHHHhhhccCCCCChHHHHHHHHHHHHhh
Q 003384 672 GIT-K-EVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRAS 737 (824)
Q Consensus 672 ~~~-~-~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le~l~~~ 737 (824)
... + ++-.++++| ...+-|.+++..|.+|++.||+++..+||.+ ..++..|+.+.+.
T Consensus 836 WdmSNQdVIkaIe~g--------yRLPpPmDCP~aL~qLMldCWqkdR~~RP~F-~qiV~~lDklIrn 894 (996)
T KOG0196|consen 836 WDMSNQDVIKAIEQG--------YRLPPPMDCPAALYQLMLDCWQKDRNRRPKF-AQIVSTLDKLIRN 894 (996)
T ss_pred cccchHHHHHHHHhc--------cCCCCCCCCcHHHHHHHHHHHHHHhhcCCCH-HHHHHHHHHHhcC
Confidence 533 2 233333332 3344578889999999999999999999999 6777888877553
No 227
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=2.2e-34 Score=308.61 Aligned_cols=253 Identities=24% Similarity=0.415 Sum_probs=200.4
Q ss_pred CCCCccceeeecCceEEEEEEEC--C----eEEEEEEecCCCCC-CchhHHHHHHHHHhcCCCceeeEecccC-CceEEE
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLLR--H----MQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACP-EVWTLV 535 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~~--~----~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIv~L~g~~~-~~~~LV 535 (824)
.+|...+.||+|+||.||+|.+. + ..||+|.+...... ....+.+|+.+++.++||||++++++|. ...++|
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~v 86 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLSSQVQLI 86 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCceEEE
Confidence 35778889999999999999864 2 35899988655332 2356889999999999999999999884 568899
Q ss_pred EEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccc
Q 003384 536 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQ 615 (824)
Q Consensus 536 ~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~ 615 (824)
|||+++|+|.+++... ...+++..+..++.|++.||.|||+ ++|+||||||+|||++.++.+||+|||+++....
T Consensus 87 ~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~LH~---~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~ 161 (279)
T cd05057 87 TQLMPLGCLLDYVRNH--KDNIGSQYLLNWCVQIAKGMSYLEE---KRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDV 161 (279)
T ss_pred EecCCCCcHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHh---CCEEecccCcceEEEcCCCeEEECCCcccccccC
Confidence 9999999999998532 3458999999999999999999999 8999999999999999999999999999987653
Q ss_pred ccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHh-CCCCCCCchHHH--HHHhhhccccccCC
Q 003384 616 NEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQ--YALDTGKLKNLLDP 692 (824)
Q Consensus 616 ~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELlt-G~~Pf~~~~~~~--~~~~~~~~~~~ld~ 692 (824)
..... ......++..|+|||.+....++.++|||||||++|||+| |++||....... ..+..+
T Consensus 162 ~~~~~------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-------- 227 (279)
T cd05057 162 DEKEY------HAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKG-------- 227 (279)
T ss_pred cccce------ecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhCC--------
Confidence 22110 0112234678999999988899999999999999999999 999997654322 111111
Q ss_pred CCCCCChhhHHHHHHHHHHHhhhccCCCCChHHHHHHHHHHHHh
Q 003384 693 LAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRA 736 (824)
Q Consensus 693 ~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le~l~~ 736 (824)
.....|...+..+.+++.+||..+|..||++ ..+.+.|..+..
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~-~~l~~~l~~~~~ 270 (279)
T cd05057 228 ERLPQPPICTIDVYMVLVKCWMIDAESRPTF-KELINEFSKMAR 270 (279)
T ss_pred CCCCCCCCCCHHHHHHHHHHcCCChhhCCCH-HHHHHHHHHHHh
Confidence 1112233455689999999999999999999 667777777643
No 228
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.3e-34 Score=311.32 Aligned_cols=245 Identities=28% Similarity=0.409 Sum_probs=192.7
Q ss_pred CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC-CCchhHHHHHHHHHhcCCCceeeEeccc--CCceEEEEEec
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYL 539 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l~HpnIv~L~g~~--~~~~~LV~Ey~ 539 (824)
+|+..+.||+|+||.||++.+. +..||+|.+..... .....+.+|+.++++++||||+++++++ ....++||||+
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (286)
T cd06622 2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYM 81 (286)
T ss_pred hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeec
Confidence 5778889999999999999886 68899998865321 1235688999999999999999999987 45688999999
Q ss_pred CCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccccccc
Q 003384 540 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEIS 619 (824)
Q Consensus 540 ~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~ 619 (824)
++++|..++........+++..+..++.+++.||.|||.. .+|+||||||+|||++.++.+||+|||++..+....
T Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~--~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~-- 157 (286)
T cd06622 82 DAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEE--HNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASL-- 157 (286)
T ss_pred CCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhc--CCEeeCCCCHHHEEECCCCCEEEeecCCcccccCCc--
Confidence 9999998885433344789999999999999999999962 479999999999999999999999999987553221
Q ss_pred CCCccccccCCCCCCcccCChhhhccC------CCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCC
Q 003384 620 SNNTTLCCRTDPKGTFAYMDPEFLASG------ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPL 693 (824)
Q Consensus 620 ~~~~~~~~~~~~~GT~~Y~APE~l~~~------~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~ 693 (824)
.....|++.|+|||.+.+. .++.++|||||||++|+|++|+.||......... ..+.......
T Consensus 158 --------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~---~~~~~~~~~~ 226 (286)
T cd06622 158 --------AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIF---AQLSAIVDGD 226 (286)
T ss_pred --------cccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHH---HHHHHHhhcC
Confidence 1234588899999998554 3578999999999999999999999643321110 0111111112
Q ss_pred CCCCChhhHHHHHHHHHHHhhhccCCCCChH
Q 003384 694 AGDWPFVQAEQLANLAMRCCEMSRKSRPELG 724 (824)
Q Consensus 694 ~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~ 724 (824)
....+...+..+.+++.+||+.+|.+||++.
T Consensus 227 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ 257 (286)
T cd06622 227 PPTLPSGYSDDAQDFVAKCLNKIPNRRPTYA 257 (286)
T ss_pred CCCCCcccCHHHHHHHHHHcccCcccCCCHH
Confidence 2223445677899999999999999999994
No 229
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=2.6e-34 Score=313.47 Aligned_cols=193 Identities=25% Similarity=0.404 Sum_probs=156.6
Q ss_pred ceeeecCceEEEEEEECC----eEEEEEEecCCCCCCchhHHHHHHHHHhcCCCceeeEeccc----CCceEEEEEecCC
Q 003384 470 LKIGEGGYGSIYKGLLRH----MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC----PEVWTLVYEYLPN 541 (824)
Q Consensus 470 ~~LG~G~fG~Vykg~~~~----~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~----~~~~~LV~Ey~~g 541 (824)
.+||+|+||.||+|...+ ..||+|.+.... ....+.+|+.+|+.++||||+++++++ ....++||||+.+
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~ 84 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAEH 84 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeCC
Confidence 579999999999998642 679999886543 234688999999999999999999987 2357899999864
Q ss_pred CChhhhhhcc------CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEe----cCCCcceeecccccc
Q 003384 542 GSLEDRLSCK------DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILL----DANFVSKLSDFGISR 611 (824)
Q Consensus 542 gsL~~~L~~~------~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILl----d~~~~vKL~DFGla~ 611 (824)
+|.+++... .....+++..+..++.|++.||.|||+ ++|+||||||+|||+ +.++.+||+|||+++
T Consensus 85 -~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~ 160 (317)
T cd07867 85 -DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHA---NWVLHRDLKPANILVMGEGPERGRVKIADMGFAR 160 (317)
T ss_pred -cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHh---CCEEcCCCCHHHEEEccCCCCCCcEEEeecccee
Confidence 777766321 123358899999999999999999999 899999999999999 567899999999998
Q ss_pred ccccccccCCCccccccCCCCCCcccCChhhhccC-CCCcchhHHhHHHHHHHHHhCCCCCCC
Q 003384 612 FLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLTGRPALGI 673 (824)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~t~ksDVwSlGvvL~ELltG~~Pf~~ 673 (824)
.+........ ......||+.|+|||++.+. .++.++|||||||++|||+||++||..
T Consensus 161 ~~~~~~~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~ 218 (317)
T cd07867 161 LFNSPLKPLA-----DLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 218 (317)
T ss_pred ccCCCccccc-----ccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCccc
Confidence 7643321111 11334689999999998764 589999999999999999999999964
No 230
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=9.3e-35 Score=328.27 Aligned_cols=245 Identities=22% Similarity=0.297 Sum_probs=188.1
Q ss_pred CCCCccceeeecCceEEEEEEEC----CeEEEEEEecCCCCCCchhHHHHHHHHHhcCCCceeeEecccC--CceEEEEE
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLLR----HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYE 537 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~~----~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~E 537 (824)
.+|.....||.|+||.||++... +..||+|.+... ..+.+|+.+|+.++||||+++++++. ...++|||
T Consensus 92 ~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e 166 (392)
T PHA03207 92 MQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVMP 166 (392)
T ss_pred CceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEeh
Confidence 46899999999999999998764 367999987542 24678999999999999999999884 46889999
Q ss_pred ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccccc
Q 003384 538 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNE 617 (824)
Q Consensus 538 y~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~ 617 (824)
|+. ++|.+++. ....+++..++.|+.||+.||.|||. +|||||||||+|||++.++.+||+|||+++.+....
T Consensus 167 ~~~-~~l~~~l~---~~~~l~~~~~~~i~~ql~~aL~~LH~---~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~ 239 (392)
T PHA03207 167 KYK-CDLFTYVD---RSGPLPLEQAITIQRRLLEALAYLHG---RGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHP 239 (392)
T ss_pred hcC-CCHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEcCCCCEEEccCccccccCccc
Confidence 995 68888883 34579999999999999999999999 899999999999999999999999999997654332
Q ss_pred ccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchH------HHHHHhh-h--c---
Q 003384 618 ISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKE------VQYALDT-G--K--- 685 (824)
Q Consensus 618 ~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~------~~~~~~~-~--~--- 685 (824)
.... .....||+.|+|||++.+..|+.++|||||||+||||++|+.||..... ....... + .
T Consensus 240 ~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~ 313 (392)
T PHA03207 240 DTPQ------CYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEF 313 (392)
T ss_pred cccc------ccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCcccc
Confidence 1111 1235699999999999999999999999999999999999999854321 1000000 0 0
Q ss_pred -----------cccccCCCCCCCC-------hhhHHHHHHHHHHHhhhccCCCCChHHH
Q 003384 686 -----------LKNLLDPLAGDWP-------FVQAEQLANLAMRCCEMSRKSRPELGKD 726 (824)
Q Consensus 686 -----------~~~~ld~~~~~~p-------~~~~~~l~~Li~~Cl~~~P~~RPt~~~~ 726 (824)
+..........++ ...+.++.+++.+||..+|++||++.+.
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~ 372 (392)
T PHA03207 314 PQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDI 372 (392)
T ss_pred CCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHH
Confidence 0000000000010 1234578899999999999999999443
No 231
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-36 Score=302.51 Aligned_cols=245 Identities=25% Similarity=0.417 Sum_probs=196.4
Q ss_pred CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC--CCchhHHHHHHHHHhcCCCceeeEecccCC--ceEEEEE
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVGACPE--VWTLVYE 537 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~--~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~~--~~~LV~E 537 (824)
.+|++...||+|.|+.||+.... |+.+|+|+++.... .+.+++.+|+.|.+.|+||||++|.....+ ..|||+|
T Consensus 11 d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvFe 90 (355)
T KOG0033|consen 11 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFD 90 (355)
T ss_pred hhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEEe
Confidence 35777788999999999987654 67889988865432 345679999999999999999999998743 5789999
Q ss_pred ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEec---CCCcceeeccccccccc
Q 003384 538 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLD---ANFVSKLSDFGISRFLS 614 (824)
Q Consensus 538 y~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld---~~~~vKL~DFGla~~~~ 614 (824)
+|.|++|..-+..+ ..+++.....++.||+.+|.|+|. ++|||||+||.|+||. .+-.+||+|||+|..+.
T Consensus 91 ~m~G~dl~~eIV~R---~~ySEa~aSH~~rQiLeal~yCH~---n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~ 164 (355)
T KOG0033|consen 91 LVTGGELFEDIVAR---EFYSEADASHCIQQILEALAYCHS---NGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVN 164 (355)
T ss_pred cccchHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHh---cCceeccCChhheeeeeccCCCceeecccceEEEeC
Confidence 99999997666433 457778888999999999999999 8999999999999995 34578999999999776
Q ss_pred cccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCC
Q 003384 615 QNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLA 694 (824)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~ 694 (824)
... . ..+.+|||+|||||++...+|+..+|||+.|||||-|+.|++||.+..... +.++....-+|...
T Consensus 165 ~g~--~-------~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~r--lye~I~~g~yd~~~ 233 (355)
T KOG0033|consen 165 DGE--A-------WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHR--LYEQIKAGAYDYPS 233 (355)
T ss_pred Ccc--c-------cccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHH--HHHHHhccccCCCC
Confidence 221 1 145679999999999999999999999999999999999999997633211 22222333334444
Q ss_pred CCCChhhHHHHHHHHHHHhhhccCCCCChHHH
Q 003384 695 GDWPFVQAEQLANLAMRCCEMSRKSRPELGKD 726 (824)
Q Consensus 695 ~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~ 726 (824)
..|+ ..+++..+|+.+||..||.+|.|..+.
T Consensus 234 ~~w~-~is~~Ak~LvrrML~~dP~kRIta~EA 264 (355)
T KOG0033|consen 234 PEWD-TVTPEAKSLIRRMLTVNPKKRITADEA 264 (355)
T ss_pred cccC-cCCHHHHHHHHHHhccChhhhccHHHH
Confidence 4554 456789999999999999999997443
No 232
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=4.9e-35 Score=310.23 Aligned_cols=235 Identities=26% Similarity=0.397 Sum_probs=183.0
Q ss_pred eeeecCceEEEEEEECC---------eEEEEEEecCCCCCCchhHHHHHHHHHhcCCCceeeEecccC--CceEEEEEec
Q 003384 471 KIGEGGYGSIYKGLLRH---------MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYL 539 (824)
Q Consensus 471 ~LG~G~fG~Vykg~~~~---------~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~Ey~ 539 (824)
.||.|+||.||+|.... ..||+|.+........+.+..|+.+++.++||||+++++++. +..++||||+
T Consensus 2 ~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~ 81 (258)
T cd05078 2 SLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEYV 81 (258)
T ss_pred CCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEecC
Confidence 59999999999997642 348888876544333457889999999999999999999883 5688999999
Q ss_pred CCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCc--------ceeecccccc
Q 003384 540 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFV--------SKLSDFGISR 611 (824)
Q Consensus 540 ~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~--------vKL~DFGla~ 611 (824)
++|+|.+++... ...+++..++.++.|++.||.|||+ ++|+||||||+|||++.++. +|++|||++.
T Consensus 82 ~~g~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~---~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~ 156 (258)
T cd05078 82 KFGSLDTYLKKN--KNLINISWKLEVAKQLAWALHFLED---KGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISI 156 (258)
T ss_pred CCCcHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCccceEEEecccccccCCCceEEeccccccc
Confidence 999999998543 3368899999999999999999999 89999999999999987765 5899999876
Q ss_pred ccccccccCCCccccccCCCCCCcccCChhhhcc-CCCCcchhHHhHHHHHHHHHhC-CCCCCCchHHHHHHhhhccccc
Q 003384 612 FLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLAS-GELTPKSDVYSFGIILLRLLTG-RPALGITKEVQYALDTGKLKNL 689 (824)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~t~ksDVwSlGvvL~ELltG-~~Pf~~~~~~~~~~~~~~~~~~ 689 (824)
..... ....|++.|+|||++.+ ..++.++|||||||++|+|++| .+||..............
T Consensus 157 ~~~~~------------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~~~~~---- 220 (258)
T cd05078 157 TVLPK------------EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQFYED---- 220 (258)
T ss_pred ccCCc------------hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHHHHHc----
Confidence 44321 12347889999999976 4588999999999999999998 467654433221111100
Q ss_pred cCCCCCCCChhhHHHHHHHHHHHhhhccCCCCChHHHHHHHH
Q 003384 690 LDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVL 731 (824)
Q Consensus 690 ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~L 731 (824)
....|......+.+|+.+||+.+|.+||++ +++++.|
T Consensus 221 ----~~~~~~~~~~~~~~li~~~l~~~p~~Rps~-~~il~~l 257 (258)
T cd05078 221 ----RHQLPAPKWTELANLINQCMDYEPDFRPSF-RAIIRDL 257 (258)
T ss_pred ----cccCCCCCcHHHHHHHHHHhccChhhCCCH-HHHHHhc
Confidence 112233344689999999999999999999 5555544
No 233
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=3.9e-34 Score=304.08 Aligned_cols=244 Identities=24% Similarity=0.368 Sum_probs=192.7
Q ss_pred CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCC-----CchhHHHHHHHHHhcCCCceeeEecccCC----ce
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ-----GPSEFQQEIDILSKIRHPNLVTLVGACPE----VW 532 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~-----~~~~f~~Ei~iL~~l~HpnIv~L~g~~~~----~~ 532 (824)
.+|...+.||+|+||.||+|... +..||||.+...... ....+.+|+.++++++||||+++++++.+ .+
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 46888899999999999999875 578999988643211 12467889999999999999999998743 46
Q ss_pred EEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccc
Q 003384 533 TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRF 612 (824)
Q Consensus 533 ~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~ 612 (824)
++||||+++++|.+++.. ...+++.....++.+++.||.|||+ .+++|+||||+|||++.++.+||+|||++..
T Consensus 82 ~~v~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~ 155 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKS---YGALTENVTRKYTRQILEGVSYLHS---NMIVHRDIKGANILRDSVGNVKLGDFGASKR 155 (265)
T ss_pred EEEEEecCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEecCCCCEEECcCccccc
Confidence 799999999999999853 2457888999999999999999999 8899999999999999999999999999886
Q ss_pred cccccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCC
Q 003384 613 LSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDP 692 (824)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~ 692 (824)
.......... .....|+..|+|||.+.+..++.++|||||||++|+|++|++||............ ...+
T Consensus 156 ~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~-----~~~~ 225 (265)
T cd06652 156 LQTICLSGTG-----MKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKI-----ATQP 225 (265)
T ss_pred cccccccccc-----cccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHH-----hcCC
Confidence 5432111110 12345899999999998888999999999999999999999999755333222111 1112
Q ss_pred CCCCCChhhHHHHHHHHHHHhhhccCCCCChH
Q 003384 693 LAGDWPFVQAEQLANLAMRCCEMSRKSRPELG 724 (824)
Q Consensus 693 ~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~ 724 (824)
.....|......+.+++.+|+. +|.+||++.
T Consensus 226 ~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~ 256 (265)
T cd06652 226 TNPVLPPHVSDHCRDFLKRIFV-EAKLRPSAD 256 (265)
T ss_pred CCCCCchhhCHHHHHHHHHHhc-ChhhCCCHH
Confidence 2233455566788999999995 999999983
No 234
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=1.4e-34 Score=310.06 Aligned_cols=245 Identities=27% Similarity=0.381 Sum_probs=194.7
Q ss_pred CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCCchhHHHHHHHHHhcCCCceeeEecccC--CceEEEEEec
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYL 539 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~Ey~ 539 (824)
.+|.+.+.||.|+||.||+|.+. +..||+|.+..........|..|+.++++++||||+++++.+. ...++||||+
T Consensus 5 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (280)
T cd06611 5 DIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEFC 84 (280)
T ss_pred hHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeecc
Confidence 46888889999999999999875 5789999987654444557889999999999999999999884 4688999999
Q ss_pred CCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccccccc
Q 003384 540 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEIS 619 (824)
Q Consensus 540 ~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~ 619 (824)
++++|.+++... ..++++..+..++.+++.||.|||+ ++|+||||||+||+++.++.++|+|||++........
T Consensus 85 ~~~~L~~~~~~~--~~~l~~~~~~~~~~ql~~~l~~lh~---~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~- 158 (280)
T cd06611 85 DGGALDSIMLEL--ERGLTEPQIRYVCRQMLEALNFLHS---HKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQ- 158 (280)
T ss_pred CCCcHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChhhEEECCCCCEEEccCccchhhccccc-
Confidence 999999988532 3468999999999999999999999 8999999999999999999999999999875432211
Q ss_pred CCCccccccCCCCCCcccCChhhhc-----cCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCC
Q 003384 620 SNNTTLCCRTDPKGTFAYMDPEFLA-----SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLA 694 (824)
Q Consensus 620 ~~~~~~~~~~~~~GT~~Y~APE~l~-----~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~ 694 (824)
......||+.|+|||++. +..++.++|||||||++|+|++|++||............. ....+ .
T Consensus 159 -------~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~---~~~~~-~ 227 (280)
T cd06611 159 -------KRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKIL---KSEPP-T 227 (280)
T ss_pred -------ccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHh---cCCCC-C
Confidence 112345899999999975 3457789999999999999999999997654332221111 10001 1
Q ss_pred CCCChhhHHHHHHHHHHHhhhccCCCCChHH
Q 003384 695 GDWPFVQAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 695 ~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
...+...+..+.+++.+||+.+|.+||++.+
T Consensus 228 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ 258 (280)
T cd06611 228 LDQPSKWSSSFNDFLKSCLVKDPDDRPTAAE 258 (280)
T ss_pred cCCcccCCHHHHHHHHHHhccChhhCcCHHH
Confidence 1123344568999999999999999999943
No 235
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=2.7e-34 Score=313.31 Aligned_cols=246 Identities=25% Similarity=0.362 Sum_probs=190.5
Q ss_pred CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCC-CchhHHHHHHHHHhcCCCceeeEeccc--CCceEEEEEec
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYL 539 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIv~L~g~~--~~~~~LV~Ey~ 539 (824)
+|...+.||+|+||.||++.+. +..+|+|.+...... ....+.+|++++++++||||++++++| .+..++||||+
T Consensus 2 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey~ 81 (308)
T cd06615 2 DFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEHM 81 (308)
T ss_pred CceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeecc
Confidence 6888899999999999999875 467899988654221 134588999999999999999999988 45789999999
Q ss_pred CCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccccccc
Q 003384 540 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEIS 619 (824)
Q Consensus 540 ~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~ 619 (824)
++++|.+++.. ...+++..+..++.+++.||.|||+. .+++||||||.|||++.++.+||+|||++.......
T Consensus 82 ~~~~L~~~l~~---~~~~~~~~~~~~~~~i~~~l~~lH~~--~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~-- 154 (308)
T cd06615 82 DGGSLDQVLKK---AGRIPENILGKISIAVLRGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM-- 154 (308)
T ss_pred CCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhh--CCEEECCCChHHEEEecCCcEEEccCCCcccccccc--
Confidence 99999999853 35688999999999999999999972 379999999999999999999999999987543221
Q ss_pred CCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhcccc-cc--------
Q 003384 620 SNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKN-LL-------- 690 (824)
Q Consensus 620 ~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~-~l-------- 690 (824)
.....|+..|+|||++.+..++.++|||||||++|+|+||+.||............+.... ..
T Consensus 155 --------~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (308)
T cd06615 155 --------ANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPV 226 (308)
T ss_pred --------cccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccc
Confidence 1234589999999999888899999999999999999999999964332111100000000 00
Q ss_pred ---------------------CCCCCCCC-hhhHHHHHHHHHHHhhhccCCCCChHH
Q 003384 691 ---------------------DPLAGDWP-FVQAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 691 ---------------------d~~~~~~p-~~~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
.......| ...+..+.+|+.+||..+|.+||++.+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ 283 (308)
T cd06615 227 SGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKE 283 (308)
T ss_pred cCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHH
Confidence 00000001 123567999999999999999999843
No 236
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=4.3e-34 Score=308.21 Aligned_cols=256 Identities=27% Similarity=0.369 Sum_probs=200.6
Q ss_pred CChhhHhhhcCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCCchhHHHHHHHHHhc-CCCceeeEecccC-
Q 003384 454 FSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKI-RHPNLVTLVGACP- 529 (824)
Q Consensus 454 ~~~~ei~~~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l-~HpnIv~L~g~~~- 529 (824)
+.+.++..++++|.....||+|+||.||+|... +..+|+|++.... .....+.+|+.++.++ +||||++++++|.
T Consensus 12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~ 90 (291)
T cd06639 12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFYK 90 (291)
T ss_pred hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEe
Confidence 455677788899999999999999999999874 5789999986532 2245678899999999 8999999999873
Q ss_pred ------CceEEEEEecCCCChhhhhhcc-CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcc
Q 003384 530 ------EVWTLVYEYLPNGSLEDRLSCK-DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVS 602 (824)
Q Consensus 530 ------~~~~LV~Ey~~ggsL~~~L~~~-~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~v 602 (824)
...++||||+++|+|.+++... .....+++..+..++.+++.||.|||. .+++||||||+||+++.++.+
T Consensus 91 ~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dlkp~nili~~~~~~ 167 (291)
T cd06639 91 ADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHN---NRIIHRDVKGNNILLTTEGGV 167 (291)
T ss_pred ccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEEcCCCCE
Confidence 2478999999999999988532 234568999999999999999999999 899999999999999999999
Q ss_pred eeeccccccccccccccCCCccccccCCCCCCcccCChhhhccC-----CCCcchhHHhHHHHHHHHHhCCCCCCCchHH
Q 003384 603 KLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG-----ELTPKSDVYSFGIILLRLLTGRPALGITKEV 677 (824)
Q Consensus 603 KL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-----~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~ 677 (824)
||+|||++......... .....|+..|+|||++... .++.++|||||||++|+|++|++||......
T Consensus 168 kl~dfg~~~~~~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~ 239 (291)
T cd06639 168 KLVDFGVSAQLTSTRLR--------RNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPV 239 (291)
T ss_pred EEeecccchhccccccc--------ccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHH
Confidence 99999998865432211 1234589999999998653 3688999999999999999999999765433
Q ss_pred HHHHhhhccccccCCCCCCCChhhHHHHHHHHHHHhhhccCCCCChHH
Q 003384 678 QYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 678 ~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
........ . ..+ ....+......+.+++.+||+.+|.+||++.+
T Consensus 240 ~~~~~~~~--~-~~~-~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ 283 (291)
T cd06639 240 KTLFKIPR--N-PPP-TLLHPEKWCRSFNHFISQCLIKDFEARPSVTH 283 (291)
T ss_pred HHHHHHhc--C-CCC-CCCcccccCHHHHHHHHHHhhcChhhCcCHHH
Confidence 22211100 0 000 00112234457999999999999999999943
No 237
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=8e-35 Score=306.94 Aligned_cols=244 Identities=35% Similarity=0.528 Sum_probs=191.0
Q ss_pred CCccceeeecCceEEEEEEECC--eEEEEEEecCCCCCCch--hHHHHHHHHHhcCCCceeeEeccc--CCceEEEEEec
Q 003384 466 FDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPS--EFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYL 539 (824)
Q Consensus 466 f~~~~~LG~G~fG~Vykg~~~~--~~VAvK~l~~~~~~~~~--~f~~Ei~iL~~l~HpnIv~L~g~~--~~~~~LV~Ey~ 539 (824)
|+..+.||+|+||+||++...+ ..||+|++......... ...+|+.+++.++||||+++++++ ....++||||+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 5567899999999999999874 57999999876432221 234599999999999999999988 45688999999
Q ss_pred CCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccccccc
Q 003384 540 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEIS 619 (824)
Q Consensus 540 ~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~ 619 (824)
++++|.+++. ....+++..+..++.+++.||.+||+ ++|+|+||||+|||++.++.++|+|||++........
T Consensus 81 ~~~~L~~~l~---~~~~~~~~~~~~~~~qi~~~L~~Lh~---~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~- 153 (260)
T PF00069_consen 81 PGGSLQDYLQ---KNKPLSEEEILKIAYQILEALAYLHS---KGIVHRDIKPENILLDENGEVKLIDFGSSVKLSENNE- 153 (260)
T ss_dssp TTEBHHHHHH---HHSSBBHHHHHHHHHHHHHHHHHHHH---TTEEESSBSGGGEEESTTSEEEESSGTTTEESTSTTS-
T ss_pred cccccccccc---cccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccccccc-
Confidence 9999999995 34568999999999999999999999 8999999999999999999999999999875411110
Q ss_pred CCCccccccCCCCCCcccCChhhhc-cCCCCcchhHHhHHHHHHHHHhCCCCCCCch--HHHHHHhhhccccccCCCCCC
Q 003384 620 SNNTTLCCRTDPKGTFAYMDPEFLA-SGELTPKSDVYSFGIILLRLLTGRPALGITK--EVQYALDTGKLKNLLDPLAGD 696 (824)
Q Consensus 620 ~~~~~~~~~~~~~GT~~Y~APE~l~-~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~--~~~~~~~~~~~~~~ld~~~~~ 696 (824)
......||..|+|||++. +..++.++||||||+++|+|++|..||.... ...................
T Consensus 154 -------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-- 224 (260)
T PF00069_consen 154 -------NFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQ-- 224 (260)
T ss_dssp -------EBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTT--
T ss_pred -------ccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhccccccccccc--
Confidence 113456899999999998 7889999999999999999999999998652 1111111111111100000
Q ss_pred CChhhHHHHHHHHHHHhhhccCCCCChHH
Q 003384 697 WPFVQAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 697 ~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
........+.+++.+||+.+|.+||++.+
T Consensus 225 ~~~~~~~~l~~li~~~l~~~p~~R~~~~~ 253 (260)
T PF00069_consen 225 QSREKSEELRDLIKKMLSKDPEQRPSAEE 253 (260)
T ss_dssp SHTTSHHHHHHHHHHHSSSSGGGSTTHHH
T ss_pred ccchhHHHHHHHHHHHccCChhHCcCHHH
Confidence 01112378999999999999999999843
No 238
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=1.5e-34 Score=319.89 Aligned_cols=243 Identities=21% Similarity=0.319 Sum_probs=187.3
Q ss_pred cCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC--CCchhHHHHHHHHHhcCCCceeeEecccC--------C
Q 003384 463 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVGACP--------E 530 (824)
Q Consensus 463 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~--~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--------~ 530 (824)
..+|...+.||.|+||.||+|... +..||||++..... .....+.+|+.+|+.++||||+++++++. .
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 93 (343)
T cd07878 14 PERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFN 93 (343)
T ss_pred hhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccccC
Confidence 357888899999999999999875 47899999865321 22345778999999999999999998773 2
Q ss_pred ceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccc
Q 003384 531 VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGIS 610 (824)
Q Consensus 531 ~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla 610 (824)
..+++++++ +++|.+++. ...+++..+..++.|++.||.|||+ ++|+||||||+|||++.++.+||+|||++
T Consensus 94 ~~~~~~~~~-~~~l~~~~~----~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivHrdikp~Nil~~~~~~~kl~Dfg~~ 165 (343)
T cd07878 94 EVYLVTNLM-GADLNNIVK----CQKLSDEHVQFLIYQLLRGLKYIHS---AGIIHRDLKPSNVAVNEDCELRILDFGLA 165 (343)
T ss_pred cEEEEeecC-CCCHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeecccCChhhEEECCCCCEEEcCCccc
Confidence 368999988 789988773 2458999999999999999999999 89999999999999999999999999999
Q ss_pred cccccccccCCCccccccCCCCCCcccCChhhhcc-CCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhh----hc
Q 003384 611 RFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLAS-GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDT----GK 685 (824)
Q Consensus 611 ~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~----~~ 685 (824)
+...... ....||+.|+|||++.+ ..++.++|||||||++|+|++|++||............ +.
T Consensus 166 ~~~~~~~-----------~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~ 234 (343)
T cd07878 166 RQADDEM-----------TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGT 234 (343)
T ss_pred eecCCCc-----------CCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCC
Confidence 8653221 23458999999999877 57899999999999999999999999754432211100 00
Q ss_pred -------------cccccCCCCCCCC--------hhhHHHHHHHHHHHhhhccCCCCChHH
Q 003384 686 -------------LKNLLDPLAGDWP--------FVQAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 686 -------------~~~~ld~~~~~~p--------~~~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
....+... ...+ ......+.+|+.+||+.+|.+||++.+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~e 294 (343)
T cd07878 235 PSPEVLKKISSEHARKYIQSL-PHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASE 294 (343)
T ss_pred CCHHHHHhcchhhHHHHhhcc-ccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHH
Confidence 00000000 0000 112345789999999999999999843
No 239
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=3.4e-34 Score=301.50 Aligned_cols=243 Identities=29% Similarity=0.467 Sum_probs=191.9
Q ss_pred eeeecCceEEEEEEEC-CeEEEEEEecCCCCC-CchhHHHHHHHHHhcCCCceeeEecccC--CceEEEEEecCCCChhh
Q 003384 471 KIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYLPNGSLED 546 (824)
Q Consensus 471 ~LG~G~fG~Vykg~~~-~~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~Ey~~ggsL~~ 546 (824)
+||.|+||.||++.+. ++.||+|.+...... ....+.+|++++++++||||+++++++. ...++||||+++++|.+
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~ 81 (251)
T cd05041 2 KIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLLT 81 (251)
T ss_pred ccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHHH
Confidence 6999999999999876 688999988764332 3457899999999999999999999884 45889999999999999
Q ss_pred hhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccccCCCcccc
Q 003384 547 RLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLC 626 (824)
Q Consensus 547 ~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~~~~~~~~ 626 (824)
++... ...+++..+..++.+++.||.|||. ++++||||||+|||++.++.+||+|||++...........
T Consensus 82 ~l~~~--~~~~~~~~~~~~~~~~~~~l~~lH~---~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~----- 151 (251)
T cd05041 82 FLRKK--KNRLTVKKLLQMSLDAAAGMEYLES---KNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVS----- 151 (251)
T ss_pred HHHhc--CCCCCHHHHHHHHHHHHHHHHHHHh---CCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceec-----
Confidence 98543 3368889999999999999999999 8999999999999999999999999999876542211110
Q ss_pred ccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHh-CCCCCCCchHHHHHHhhhccccccCCCCCCCChhhHHHH
Q 003384 627 CRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQL 705 (824)
Q Consensus 627 ~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELlt-G~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l 705 (824)
.....++..|+|||.+.++.++.++|||||||++|+|+| |.+||............ .. ......+...+..+
T Consensus 152 -~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~---~~---~~~~~~~~~~~~~~ 224 (251)
T cd05041 152 -DGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERI---ES---GYRMPAPQLCPEEI 224 (251)
T ss_pred -cccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHH---hc---CCCCCCCccCCHHH
Confidence 011234677999999988899999999999999999999 88998654432211111 00 00112234456789
Q ss_pred HHHHHHHhhhccCCCCChHHHHHHHH
Q 003384 706 ANLAMRCCEMSRKSRPELGKDVWRVL 731 (824)
Q Consensus 706 ~~Li~~Cl~~~P~~RPt~~~~v~~~L 731 (824)
.+++.+|+..+|.+||++ .++++.|
T Consensus 225 ~~li~~~l~~~p~~Rp~~-~ell~~l 249 (251)
T cd05041 225 YRLMLQCWAYDPENRPSF-SEIYNEL 249 (251)
T ss_pred HHHHHHHhccChhhCcCH-HHHHHHh
Confidence 999999999999999999 6665555
No 240
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=4.8e-35 Score=322.06 Aligned_cols=258 Identities=28% Similarity=0.480 Sum_probs=205.2
Q ss_pred CCCccceeeecCceEEEEEEECC-eEEEEEEecCCCCCCc-hhHHHHHHHHHhcCCCceeeEeccc--CCceEEEEEecC
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLRH-MQVAIKMLHPHSLQGP-SEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYLP 540 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~~-~~VAvK~l~~~~~~~~-~~f~~Ei~iL~~l~HpnIv~L~g~~--~~~~~LV~Ey~~ 540 (824)
...+.++||+|-||+|......+ ..||||+++.....+. ..|.+|+.+|.+|+|||||+|+|+| ++..++|+||++
T Consensus 539 ~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYmE 618 (807)
T KOG1094|consen 539 RLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYME 618 (807)
T ss_pred heehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHHh
Confidence 34556789999999999998887 8999999998765554 7899999999999999999999999 567889999999
Q ss_pred CCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccccC
Q 003384 541 NGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISS 620 (824)
Q Consensus 541 ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~~ 620 (824)
+|+|..+|..... +.+......+|+.||+.|++||.+ .++|||||.+.|+|+|.++++||+|||+++.+.......
T Consensus 619 nGDLnqFl~ahea-pt~~t~~~vsi~tqiasgmaYLes---~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~ 694 (807)
T KOG1094|consen 619 NGDLNQFLSAHEL-PTAETAPGVSICTQIASGMAYLES---LNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYR 694 (807)
T ss_pred cCcHHHHHHhccC-cccccchhHHHHHHHHHHHHHHHh---hchhhccccccceeecCcccEEecCcccccccccCCcee
Confidence 9999999965422 224555677899999999999999 679999999999999999999999999999665554322
Q ss_pred CCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHh--CCCCCCCchHHHHHHhhhccccccC-CCCCCC
Q 003384 621 NNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT--GRPALGITKEVQYALDTGKLKNLLD-PLAGDW 697 (824)
Q Consensus 621 ~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELlt--G~~Pf~~~~~~~~~~~~~~~~~~ld-~~~~~~ 697 (824)
. .+..+-.+.|||||.+..++++.++|||+||++|||+++ ...||.....-+..-+.+.+..--. ......
T Consensus 695 v------qgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~~l~~ 768 (807)
T KOG1094|consen 695 V------QGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQVVLSR 768 (807)
T ss_pred e------ecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCcceeccC
Confidence 1 133455789999999999999999999999999999875 7788864433222222222211111 122345
Q ss_pred ChhhHHHHHHHHHHHhhhccCCCCChHHHHHHHHHH
Q 003384 698 PFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEP 733 (824)
Q Consensus 698 p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le~ 733 (824)
|..++..+.+++++||..+-.+||++ +.+...|..
T Consensus 769 P~~cp~~lyelml~Cw~~es~~RPsF-e~lh~~lq~ 803 (807)
T KOG1094|consen 769 PPACPQGLYELMLRCWRRESEQRPSF-EQLHLFLQE 803 (807)
T ss_pred CCcCcHHHHHHHHHHhchhhhcCCCH-HHHHHHHHH
Confidence 67778899999999999999999999 566555543
No 241
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=1.3e-34 Score=309.90 Aligned_cols=241 Identities=27% Similarity=0.399 Sum_probs=192.5
Q ss_pred CCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC-CCchhHHHHHHHHHhcCCCceeeEecccC--CceEEEEEecC
Q 003384 466 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYLP 540 (824)
Q Consensus 466 f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~Ey~~ 540 (824)
|...+.||.|+||.||+|.+. +..||+|.+..... .....+.+|+.+++.++||||++++++|. ...++||||++
T Consensus 6 y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 85 (277)
T cd06642 6 FTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLG 85 (277)
T ss_pred HHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEccC
Confidence 556677999999999999875 57899999875432 22346889999999999999999999884 46899999999
Q ss_pred CCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccccC
Q 003384 541 NGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISS 620 (824)
Q Consensus 541 ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~~ 620 (824)
+++|.+++. ..++++..+..++.+++.||.|||+ ++++|+||+|+||+++.++.+||+|||++..+.....
T Consensus 86 ~~~L~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~---~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~-- 156 (277)
T cd06642 86 GGSALDLLK----PGPLEETYIATILREILKGLDYLHS---ERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI-- 156 (277)
T ss_pred CCcHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHhc---CCeeccCCChheEEEeCCCCEEEccccccccccCcch--
Confidence 999999884 2468899999999999999999999 8999999999999999999999999999876543211
Q ss_pred CCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCCCCChh
Q 003384 621 NNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFV 700 (824)
Q Consensus 621 ~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~ 700 (824)
......|+..|+|||++.+..++.++|||||||++|||+||++||........... .........+..
T Consensus 157 ------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~------~~~~~~~~~~~~ 224 (277)
T cd06642 157 ------KRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFL------IPKNSPPTLEGQ 224 (277)
T ss_pred ------hhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhh------hhcCCCCCCCcc
Confidence 11234588999999999988899999999999999999999999964332211110 001111122334
Q ss_pred hHHHHHHHHHHHhhhccCCCCChHHHH
Q 003384 701 QAEQLANLAMRCCEMSRKSRPELGKDV 727 (824)
Q Consensus 701 ~~~~l~~Li~~Cl~~~P~~RPt~~~~v 727 (824)
.+..+.+++.+||+.+|.+||++.+.+
T Consensus 225 ~~~~~~~li~~~l~~~p~~Rp~~~~il 251 (277)
T cd06642 225 YSKPFKEFVEACLNKDPRFRPTAKELL 251 (277)
T ss_pred cCHHHHHHHHHHccCCcccCcCHHHHH
Confidence 567899999999999999999995444
No 242
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=5e-34 Score=311.58 Aligned_cols=258 Identities=23% Similarity=0.255 Sum_probs=199.0
Q ss_pred CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCC---CchhHHHHHHHHHhcCCCceeeEecccC--CceEEEEE
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ---GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYE 537 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~---~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~E 537 (824)
+|...+.||+|+||.||+|... +..||||.+...... ....+..|+++++.++||||+++++.+. ...++|||
T Consensus 2 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 81 (316)
T cd05574 2 HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMD 81 (316)
T ss_pred ceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEE
Confidence 5788889999999999999885 588999998765433 2346889999999999999999999874 46789999
Q ss_pred ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccccc
Q 003384 538 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNE 617 (824)
Q Consensus 538 y~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~ 617 (824)
|+.|++|.+++... ....+++..+..++.|++.||.|||. .+++||||||+|||++.++.++|+|||++.......
T Consensus 82 ~~~~~~L~~~~~~~-~~~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~ 157 (316)
T cd05574 82 YCPGGELFRLLQRQ-PGKCLSEEVARFYAAEVLLALEYLHL---LGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEP 157 (316)
T ss_pred ecCCCCHHHHHHhC-CCCccCHHHHHHHHHHHHHHHHHHHH---CCeeccCCChHHeEEcCCCCEEEeecchhhcccccc
Confidence 99999999988532 34568999999999999999999999 899999999999999999999999999987553321
Q ss_pred ccCCCc---------------------cccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchH
Q 003384 618 ISSNNT---------------------TLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKE 676 (824)
Q Consensus 618 ~~~~~~---------------------~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~ 676 (824)
...... .........||..|+|||++.+..++.++|||||||++|+|++|+.||.....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~ 237 (316)
T cd05574 158 PPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNR 237 (316)
T ss_pred cccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCch
Confidence 110000 00011234689999999999988899999999999999999999999976543
Q ss_pred HHHHHhhhccccccCCCCCCCChhhHHHHHHHHHHHhhhccCCCCChHHHHHHHH
Q 003384 677 VQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVL 731 (824)
Q Consensus 677 ~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~L 731 (824)
........ .. ..........+..+.+++.+||..+|.+||+....+.++|
T Consensus 238 ~~~~~~~~--~~---~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll 287 (316)
T cd05574 238 DETFSNIL--KK---EVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIK 287 (316)
T ss_pred HHHHHHHh--cC---CccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHH
Confidence 32211110 00 0000111125678999999999999999999644443333
No 243
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=2.9e-35 Score=324.07 Aligned_cols=232 Identities=25% Similarity=0.307 Sum_probs=180.4
Q ss_pred eeecCceEEEEEEEC--CeEEEEEEecCCCCC---CchhHHHHHHHHHhc---CCCceeeEecccC--CceEEEEEecCC
Q 003384 472 IGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ---GPSEFQQEIDILSKI---RHPNLVTLVGACP--EVWTLVYEYLPN 541 (824)
Q Consensus 472 LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~---~~~~f~~Ei~iL~~l---~HpnIv~L~g~~~--~~~~LV~Ey~~g 541 (824)
||+|+||+||+|... +..||||++...... ....+..|..++..+ +||||+++++.+. +..++||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 799999999999875 588999998643211 123455677777765 6999999999874 468999999999
Q ss_pred CChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccccCC
Q 003384 542 GSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSN 621 (824)
Q Consensus 542 gsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~~~ 621 (824)
|+|.+++.. ...+++..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||++.........
T Consensus 81 g~L~~~l~~---~~~~~~~~~~~~~~qil~al~~LH~---~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~-- 152 (330)
T cd05586 81 GELFWHLQK---EGRFSEDRAKFYIAELVLALEHLHK---YDIVYRDLKPENILLDATGHIALCDFGLSKANLTDNKT-- 152 (330)
T ss_pred ChHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCC--
Confidence 999998843 3568899999999999999999999 89999999999999999999999999998753322111
Q ss_pred CccccccCCCCCCcccCChhhhccC-CCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCCCCC-h
Q 003384 622 NTTLCCRTDPKGTFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWP-F 699 (824)
Q Consensus 622 ~~~~~~~~~~~GT~~Y~APE~l~~~-~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p-~ 699 (824)
.....||+.|+|||++.+. .++.++|||||||+||+|+||+.||......... ........ .++ .
T Consensus 153 ------~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~-~~i~~~~~------~~~~~ 219 (330)
T cd05586 153 ------TNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMY-RNIAFGKV------RFPKN 219 (330)
T ss_pred ------ccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHH-HHHHcCCC------CCCCc
Confidence 1234699999999998765 5899999999999999999999999765432211 11000000 111 1
Q ss_pred hhHHHHHHHHHHHhhhccCCCCChH
Q 003384 700 VQAEQLANLAMRCCEMSRKSRPELG 724 (824)
Q Consensus 700 ~~~~~l~~Li~~Cl~~~P~~RPt~~ 724 (824)
..+..+.+++.+||+.+|.+||+..
T Consensus 220 ~~~~~~~~li~~~L~~~P~~R~~~~ 244 (330)
T cd05586 220 VLSDEGRQFVKGLLNRNPQHRLGAH 244 (330)
T ss_pred cCCHHHHHHHHHHcCCCHHHCCCCC
Confidence 2456889999999999999999653
No 244
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.9e-34 Score=310.04 Aligned_cols=248 Identities=26% Similarity=0.381 Sum_probs=193.7
Q ss_pred CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC-CCchhHHHHHHHHHhcCCCceeeEecccC--CceEEEEEe
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEY 538 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~Ey 538 (824)
++|...+.||+|+||+||+|... +..||+|++..... .....+.+|+++++.++||||+++++++. ..+++||||
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF 84 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence 35777889999999999999876 67899998865432 23457899999999999999999999884 468899999
Q ss_pred cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccc
Q 003384 539 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEI 618 (824)
Q Consensus 539 ~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~ 618 (824)
+++|+|.+++.. ..++++.....++.+++.||.|||+. .+++||||||+||+++.++.++|+|||++.......
T Consensus 85 ~~~~~L~~~~~~---~~~~~~~~~~~~~~~i~~~l~~LH~~--~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~- 158 (284)
T cd06620 85 MDCGSLDRIYKK---GGPIPVEILGKIAVAVVEGLTYLYNV--HRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSI- 158 (284)
T ss_pred CCCCCHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHHh--cCeeccCCCHHHEEECCCCcEEEccCCcccchhhhc-
Confidence 999999998843 34689999999999999999999973 379999999999999999999999999986543221
Q ss_pred cCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHH------HHHhhhccccccCC
Q 003384 619 SSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQ------YALDTGKLKNLLDP 692 (824)
Q Consensus 619 ~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~------~~~~~~~~~~~ld~ 692 (824)
.....|+..|+|||++.+..++.++|||||||++|+|+||+.||....... ..+. ..+......
T Consensus 159 ---------~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 228 (284)
T cd06620 159 ---------ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGIL-DLLQQIVQE 228 (284)
T ss_pred ---------cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHH-HHHHHHhhc
Confidence 023458999999999988899999999999999999999999997533210 0000 001111111
Q ss_pred CCCCCCh-hhHHHHHHHHHHHhhhccCCCCChHHHHH
Q 003384 693 LAGDWPF-VQAEQLANLAMRCCEMSRKSRPELGKDVW 728 (824)
Q Consensus 693 ~~~~~p~-~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~ 728 (824)
.....+. ..+..+.+|+.+|++.+|.+||++ +++.
T Consensus 229 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~-~e~~ 264 (284)
T cd06620 229 PPPRLPSSDFPEDLRDFVDACLLKDPTERPTP-QQLC 264 (284)
T ss_pred cCCCCCchhcCHHHHHHHHHHhcCCcccCcCH-HHHh
Confidence 1111111 245679999999999999999999 5554
No 245
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=5.9e-34 Score=305.29 Aligned_cols=247 Identities=28% Similarity=0.364 Sum_probs=191.3
Q ss_pred CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC--CCchhHHHHHHHHHhcCCCceeeEecccC--CceEEEEEe
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEY 538 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~--~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~Ey 538 (824)
+|+....||+|+||.||+|... +..||+|++..... ...+.+.+|+.+++.++||||+++++++. ...++||||
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~ 81 (286)
T cd07847 2 KYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFEY 81 (286)
T ss_pred ceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEec
Confidence 6788889999999999999886 57899998864322 22346789999999999999999999884 467899999
Q ss_pred cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccc
Q 003384 539 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEI 618 (824)
Q Consensus 539 ~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~ 618 (824)
+++++|..++. ....+++..+..++.|++.||.|||+ .+++||||||+||+++.++.+||+|||++........
T Consensus 82 ~~~~~l~~~~~---~~~~~~~~~~~~~~~ql~~~l~~LH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 155 (286)
T cd07847 82 CDHTVLNELEK---NPRGVPEHLIKKIIWQTLQAVNFCHK---HNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGD 155 (286)
T ss_pred cCccHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCChhhEEEcCCCcEEECccccceecCCCcc
Confidence 99998887763 23458999999999999999999999 8999999999999999999999999999987644321
Q ss_pred cCCCccccccCCCCCCcccCChhhhcc-CCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhc-ccc--------
Q 003384 619 SSNNTTLCCRTDPKGTFAYMDPEFLAS-GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGK-LKN-------- 688 (824)
Q Consensus 619 ~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~-~~~-------- 688 (824)
. .....++..|+|||++.+ ..++.++|||||||++|+|+||++||.............. ...
T Consensus 156 ~--------~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (286)
T cd07847 156 D--------YTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQI 227 (286)
T ss_pred c--------ccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhh
Confidence 1 122357889999999876 4578999999999999999999999976543322111100 000
Q ss_pred ---------ccCCCCC-C-----CChhhHHHHHHHHHHHhhhccCCCCChHH
Q 003384 689 ---------LLDPLAG-D-----WPFVQAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 689 ---------~ld~~~~-~-----~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
...+... . +....+..+.+|+.+||+.+|.+||++.+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e 279 (286)
T cd07847 228 FSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEE 279 (286)
T ss_pred cccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHH
Confidence 0000000 0 00123567899999999999999999943
No 246
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=5.8e-34 Score=299.72 Aligned_cols=245 Identities=31% Similarity=0.499 Sum_probs=194.5
Q ss_pred CccceeeecCceEEEEEEECC------eEEEEEEecCCCCC-CchhHHHHHHHHHhcCCCceeeEecccC--CceEEEEE
Q 003384 467 DPSLKIGEGGYGSIYKGLLRH------MQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYE 537 (824)
Q Consensus 467 ~~~~~LG~G~fG~Vykg~~~~------~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~E 537 (824)
.+...||.|+||.||++.... ..||+|++...... ....+..|+.++..++||||+++++++. ...++|||
T Consensus 2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e 81 (258)
T smart00219 2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVME 81 (258)
T ss_pred cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEe
Confidence 456789999999999998864 77999999765433 4567999999999999999999999884 46889999
Q ss_pred ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccccc
Q 003384 538 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNE 617 (824)
Q Consensus 538 y~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~ 617 (824)
|+++++|.+++..... ..+++..+..++.+++.||.|||+ .+++||||||+||+++.++.++|+|||++.......
T Consensus 82 ~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~ql~~~l~~lh~---~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~ 157 (258)
T smart00219 82 YMEGGDLLDYLRKNRP-KELSLSDLLSFALQIARGMEYLES---KNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDD 157 (258)
T ss_pred ccCCCCHHHHHHhhhh-ccCCHHHHHHHHHHHHHHHHHHhc---CCeeecccccceEEEccCCeEEEcccCCceeccccc
Confidence 9999999999853321 128999999999999999999999 899999999999999999999999999998765442
Q ss_pred ccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHh-CCCCCCCchHHHHHHhhhccccccCCCCCC
Q 003384 618 ISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNLLDPLAGD 696 (824)
Q Consensus 618 ~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELlt-G~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~ 696 (824)
.... ....+++.|+|||.+.+..++.++|||||||++|+|++ |++||................ ...
T Consensus 158 ~~~~-------~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~------~~~ 224 (258)
T smart00219 158 YYKK-------KGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKGY------RLP 224 (258)
T ss_pred cccc-------ccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCC------CCC
Confidence 2111 12237889999999988889999999999999999998 899997543322111111100 111
Q ss_pred CChhhHHHHHHHHHHHhhhccCCCCChHHHHHH
Q 003384 697 WPFVQAEQLANLAMRCCEMSRKSRPELGKDVWR 729 (824)
Q Consensus 697 ~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~ 729 (824)
.+...+..+.+++.+|+..+|.+||++ .++.+
T Consensus 225 ~~~~~~~~~~~~i~~~l~~~p~~Rpt~-~~ll~ 256 (258)
T smart00219 225 KPENCPPEIYKLMLQCWAEDPEDRPTF-SELVE 256 (258)
T ss_pred CCCcCCHHHHHHHHHHCcCChhhCcCH-HHHHh
Confidence 233356789999999999999999999 44543
No 247
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=3.8e-34 Score=304.92 Aligned_cols=253 Identities=24% Similarity=0.395 Sum_probs=195.0
Q ss_pred CCccceeeecCceEEEEEEEC-----CeEEEEEEecCCCCC--CchhHHHHHHHHHhcCCCceeeEecccCC--------
Q 003384 466 FDPSLKIGEGGYGSIYKGLLR-----HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPNLVTLVGACPE-------- 530 (824)
Q Consensus 466 f~~~~~LG~G~fG~Vykg~~~-----~~~VAvK~l~~~~~~--~~~~f~~Ei~iL~~l~HpnIv~L~g~~~~-------- 530 (824)
|...+.||+|+||.||+|.+. +..||||++...... ..+.+.+|+.+++.++||||+++++++..
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 455678999999999999863 467999998754322 24568899999999999999999997621
Q ss_pred ceEEEEEecCCCChhhhhhcc---CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecc
Q 003384 531 VWTLVYEYLPNGSLEDRLSCK---DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF 607 (824)
Q Consensus 531 ~~~LV~Ey~~ggsL~~~L~~~---~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DF 607 (824)
..+++++|+.+|+|.+++... .....+++.....++.+++.||.|||+ ++|+||||||+|||++.++.+||+||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~nili~~~~~~kl~df 157 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSS---KNFIHRDLAARNCMLNENMTVCVADF 157 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCEeecccchhhEEEcCCCCEEECcc
Confidence 247899999999999887432 122357889999999999999999999 89999999999999999999999999
Q ss_pred ccccccccccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHh-CCCCCCCchHHHHHHhhhcc
Q 003384 608 GISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKL 686 (824)
Q Consensus 608 Gla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELlt-G~~Pf~~~~~~~~~~~~~~~ 686 (824)
|+++.......... .....+++.|++||.+.+..++.++|||||||++|+|++ |++||...............
T Consensus 158 g~~~~~~~~~~~~~------~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~ 231 (273)
T cd05074 158 GLSKKIYSGDYYRQ------GCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKG 231 (273)
T ss_pred cccccccCCcceec------CCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHcC
Confidence 99986543221111 112345678999999998899999999999999999999 89999755432211111000
Q ss_pred ccccCCCCCCCChhhHHHHHHHHHHHhhhccCCCCChHHHHHHHHHHH
Q 003384 687 KNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM 734 (824)
Q Consensus 687 ~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le~l 734 (824)
. ....+...+..+.+++.+||+.+|.+||++ .+++..|+.+
T Consensus 232 ~------~~~~~~~~~~~~~~l~~~~l~~~p~~Rps~-~~~~~~l~~~ 272 (273)
T cd05074 232 N------RLKQPPDCLEDVYELMCQCWSPEPKCRPSF-QHLRDQLELI 272 (273)
T ss_pred C------cCCCCCCCCHHHHHHHHHHcCCChhhCcCH-HHHHHHHHhh
Confidence 0 111223445689999999999999999999 7777777653
No 248
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=5.3e-34 Score=300.89 Aligned_cols=242 Identities=24% Similarity=0.344 Sum_probs=195.2
Q ss_pred CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCC--CCCchhHHHHHHHHHhcCCCceeeEecccC--CceEEEEEe
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS--LQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEY 538 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~--~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~Ey 538 (824)
+|+..+.||.|+||.||.+... +..+++|.+.... ......+.+|+.++++++||||+++++++. +..++||||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~ 80 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY 80 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence 4788899999999988877654 5789999886543 223456889999999999999999999884 467899999
Q ss_pred cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccc
Q 003384 539 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEI 618 (824)
Q Consensus 539 ~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~ 618 (824)
+++|+|.+++.... ...+++..+..++.+++.||.|||+ .+++||||+|+||+++.++.+||+|||++........
T Consensus 81 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~ 156 (256)
T cd08221 81 ANGGTLYDKIVRQK-GQLFEEEMVLWYLFQIVSAVSYIHK---AGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS 156 (256)
T ss_pred cCCCcHHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHh---CCccccCCChHhEEEeCCCCEEECcCcceEEcccccc
Confidence 99999999986432 3568999999999999999999999 7899999999999999999999999999986643321
Q ss_pred cCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHH--hhhccccccCCCCCC
Q 003384 619 SSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYAL--DTGKLKNLLDPLAGD 696 (824)
Q Consensus 619 ~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~--~~~~~~~~ld~~~~~ 696 (824)
. .....|++.|+|||++.+..++.++|||||||++|+|++|..||.......... ..+.. ..
T Consensus 157 ~--------~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~--------~~ 220 (256)
T cd08221 157 M--------AETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGNY--------TP 220 (256)
T ss_pred c--------ccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCC--------CC
Confidence 1 123458999999999988888999999999999999999999997654322211 11111 11
Q ss_pred CChhhHHHHHHHHHHHhhhccCCCCChHHHH
Q 003384 697 WPFVQAEQLANLAMRCCEMSRKSRPELGKDV 727 (824)
Q Consensus 697 ~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v 727 (824)
.+...+..+.+++.+||..+|.+||++ +++
T Consensus 221 ~~~~~~~~~~~~i~~~l~~~p~~R~s~-~~l 250 (256)
T cd08221 221 VVSVYSSELISLVHSLLQQDPEKRPTA-DEV 250 (256)
T ss_pred CccccCHHHHHHHHHHcccCcccCCCH-HHH
Confidence 123445689999999999999999998 444
No 249
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=5.5e-34 Score=300.23 Aligned_cols=240 Identities=27% Similarity=0.429 Sum_probs=194.3
Q ss_pred CCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCC-----CchhHHHHHHHHHhcCCCceeeEecccC--CceEEEE
Q 003384 466 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ-----GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVY 536 (824)
Q Consensus 466 f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~-----~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~ 536 (824)
|...+.||+|+||.||+|... +..|++|.+...... ....+.+|+.+++.++||||+++++++. ...++||
T Consensus 2 ~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~ 81 (258)
T cd06632 2 WRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFL 81 (258)
T ss_pred ccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEEE
Confidence 566778999999999999885 688999998654321 2356889999999999999999999884 4688999
Q ss_pred EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccc
Q 003384 537 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQN 616 (824)
Q Consensus 537 Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~ 616 (824)
||+++++|.+++.. ..++++..+..++.+++.||.|||+ .+++|+||+|+||+++.++.+||+|||++......
T Consensus 82 e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~ 155 (258)
T cd06632 82 ELVPGGSLAKLLKK---YGSFPEPVIRLYTRQILLGLEYLHD---RNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEF 155 (258)
T ss_pred EecCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEccCccceecccc
Confidence 99999999999843 3468899999999999999999999 89999999999999999999999999998865432
Q ss_pred cccCCCccccccCCCCCCcccCChhhhccCC-CCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCC
Q 003384 617 EISSNNTTLCCRTDPKGTFAYMDPEFLASGE-LTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAG 695 (824)
Q Consensus 617 ~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~ 695 (824)
.. .....|++.|+|||.+.... ++.++|+|||||++|+|++|++||............+.... ..
T Consensus 156 ~~---------~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~-----~~ 221 (258)
T cd06632 156 SF---------AKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSKE-----LP 221 (258)
T ss_pred cc---------ccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhccc-----CC
Confidence 20 12345899999999987766 89999999999999999999999976554333322221111 11
Q ss_pred CCChhhHHHHHHHHHHHhhhccCCCCChHH
Q 003384 696 DWPFVQAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 696 ~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
..+......+.+++.+||+.+|.+||++.+
T Consensus 222 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ 251 (258)
T cd06632 222 PIPDHLSDEAKDFILKCLQRDPSLRPTAAE 251 (258)
T ss_pred CcCCCcCHHHHHHHHHHhhcCcccCcCHHH
Confidence 223345678999999999999999999843
No 250
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=5.2e-34 Score=305.60 Aligned_cols=241 Identities=26% Similarity=0.383 Sum_probs=194.3
Q ss_pred CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC-CCchhHHHHHHHHHhcCCCceeeEecccC--CceEEEEEec
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYL 539 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~Ey~ 539 (824)
.|+..+.||.|+||.||+|.+. +..||||++..... .....+.+|+.+++.++||||+++++++. ...++||||+
T Consensus 5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06640 5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecC
Confidence 4677788999999999999875 57899999875432 22456889999999999999999999884 4689999999
Q ss_pred CCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccccccc
Q 003384 540 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEIS 619 (824)
Q Consensus 540 ~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~ 619 (824)
+||+|.+++. ..++++.....++.+++.||.|||+ ++++|+||+|+||+++.++.++|+|||++.........
T Consensus 85 ~~~~L~~~i~----~~~l~~~~~~~~~~~l~~~l~~lh~---~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~ 157 (277)
T cd06640 85 GGGSALDLLR----AGPFDEFQIATMLKEILKGLDYLHS---EKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIK 157 (277)
T ss_pred CCCcHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHh---CCccCcCCChhhEEEcCCCCEEEcccccceeccCCccc
Confidence 9999999884 2458889999999999999999999 89999999999999999999999999999765432211
Q ss_pred CCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCCCCCh
Q 003384 620 SNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPF 699 (824)
Q Consensus 620 ~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~ 699 (824)
.....|+..|+|||++.+..++.++|||||||++|+|+||.+||............ ........+.
T Consensus 158 --------~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~------~~~~~~~~~~ 223 (277)
T cd06640 158 --------RNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLI------PKNNPPTLTG 223 (277)
T ss_pred --------cccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhh------hcCCCCCCch
Confidence 12345889999999998888999999999999999999999999754332211110 0001122344
Q ss_pred hhHHHHHHHHHHHhhhccCCCCChHHH
Q 003384 700 VQAEQLANLAMRCCEMSRKSRPELGKD 726 (824)
Q Consensus 700 ~~~~~l~~Li~~Cl~~~P~~RPt~~~~ 726 (824)
..+..+.+++.+||+.+|.+||++.+.
T Consensus 224 ~~~~~~~~li~~~l~~~p~~Rp~~~~i 250 (277)
T cd06640 224 EFSKPFKEFIDACLNKDPSFRPTAKEL 250 (277)
T ss_pred hhhHHHHHHHHHHcccCcccCcCHHHH
Confidence 567789999999999999999999433
No 251
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=4.4e-34 Score=310.25 Aligned_cols=241 Identities=25% Similarity=0.354 Sum_probs=192.0
Q ss_pred CCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCCchhHHHHHHHHHhcCCCceeeEeccc--CCceEEEEEecCC
Q 003384 466 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYLPN 541 (824)
Q Consensus 466 f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~--~~~~~LV~Ey~~g 541 (824)
|+....||.|+||.||+|... +..||||.+..........+.+|+.++..++||||++++++| .+..++||||+++
T Consensus 23 ~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~ 102 (297)
T cd06659 23 LENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQG 102 (297)
T ss_pred HHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCC
Confidence 334457999999999999874 688999998765444556788999999999999999999987 4568999999999
Q ss_pred CChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccccCC
Q 003384 542 GSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSN 621 (824)
Q Consensus 542 gsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~~~ 621 (824)
++|..++. ...+++..+..++.|++.||.|||+ ++++||||||+|||++.++.+||+|||++..+......
T Consensus 103 ~~L~~~~~----~~~~~~~~~~~~~~qi~~~L~~LH~---~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~-- 173 (297)
T cd06659 103 GALTDIVS----QTRLNEEQIATVCESVLQALCYLHS---QGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPK-- 173 (297)
T ss_pred CCHHHHHh----hcCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHeEEccCCcEEEeechhHhhccccccc--
Confidence 99998873 2458899999999999999999999 88999999999999999999999999998755432111
Q ss_pred CccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCCCCChhh
Q 003384 622 NTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQ 701 (824)
Q Consensus 622 ~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~ 701 (824)
.....|+..|+|||++.+..++.++|||||||++|||++|++||............. ....+. ...+...
T Consensus 174 ------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~---~~~~~~-~~~~~~~ 243 (297)
T cd06659 174 ------RKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLR---DSPPPK-LKNAHKI 243 (297)
T ss_pred ------ccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh---ccCCCC-ccccCCC
Confidence 123458999999999998889999999999999999999999997554332211110 000111 1112234
Q ss_pred HHHHHHHHHHHhhhccCCCCChHH
Q 003384 702 AEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 702 ~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
+..+.+++.+||+.+|.+||++.+
T Consensus 244 ~~~l~~~i~~~l~~~P~~Rps~~~ 267 (297)
T cd06659 244 SPVLRDFLERMLTREPQERATAQE 267 (297)
T ss_pred CHHHHHHHHHHhcCCcccCcCHHH
Confidence 567899999999999999999843
No 252
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=7.9e-34 Score=300.56 Aligned_cols=252 Identities=25% Similarity=0.347 Sum_probs=198.2
Q ss_pred CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC-CCchhHHHHHHHHHhcCCCceeeEeccc--CCceEEEEEe
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEY 538 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l~HpnIv~L~g~~--~~~~~LV~Ey 538 (824)
++|+..+.||.|+||+||+|... +..+++|++..... .....+.+|+.+++.++||||+++++.+ .+..++||||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 80 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY 80 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence 36888899999999999999874 57899999865432 2456789999999999999999999987 4568899999
Q ss_pred cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccc
Q 003384 539 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEI 618 (824)
Q Consensus 539 ~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~ 618 (824)
+++++|.+++........+++.....++.+++.||.|||+ .|++||||+|+||+++.++.+||+|||++..+.....
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~---~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~ 157 (267)
T cd06610 81 LSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHS---NGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGD 157 (267)
T ss_pred cCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCcc
Confidence 9999999999654333568999999999999999999999 8999999999999999999999999999987654332
Q ss_pred cCCCccccccCCCCCCcccCChhhhccC-CCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCCCC
Q 003384 619 SSNNTTLCCRTDPKGTFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDW 697 (824)
Q Consensus 619 ~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~ 697 (824)
... .......|+..|+|||++... .++.++|||||||++|+|++|+.||............ ... ..+.....
T Consensus 158 ~~~----~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~--~~~-~~~~~~~~ 230 (267)
T cd06610 158 RTR----KVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLT--LQN-DPPSLETG 230 (267)
T ss_pred ccc----cccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHH--hcC-CCCCcCCc
Confidence 210 011334689999999998877 7889999999999999999999999755433211111 000 01111110
Q ss_pred --ChhhHHHHHHHHHHHhhhccCCCCChHH
Q 003384 698 --PFVQAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 698 --p~~~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
....+..+.+++.+||..+|.+||++.+
T Consensus 231 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ 260 (267)
T cd06610 231 ADYKKYSKSFRKMISLCLQKDPSKRPTAEE 260 (267)
T ss_pred cccccccHHHHHHHHHHcCCChhhCcCHHH
Confidence 1234578899999999999999999843
No 253
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=6.3e-34 Score=303.87 Aligned_cols=250 Identities=26% Similarity=0.441 Sum_probs=196.0
Q ss_pred CCCCccceeeecCceEEEEEEEC-------CeEEEEEEecCCCCC-CchhHHHHHHHHHhcCCCceeeEecccCC--ceE
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLLR-------HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACPE--VWT 533 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~~-------~~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIv~L~g~~~~--~~~ 533 (824)
.+|.....||.|+||.||+|... ...|++|.+...... ....+.+|+.++++++||||++++++|.+ ..+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 84 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY 84 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence 46788889999999999999864 256999988654332 23578999999999999999999999854 688
Q ss_pred EEEEecCCCChhhhhhccCCC------CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecc
Q 003384 534 LVYEYLPNGSLEDRLSCKDNS------PPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF 607 (824)
Q Consensus 534 LV~Ey~~ggsL~~~L~~~~~~------~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DF 607 (824)
+||||+++|+|.+++...... ..+++..+..++.+++.||.|||+ .+|+||||||+|||++.++.++|+||
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~---~~i~H~dlkp~Nili~~~~~~~l~~~ 161 (275)
T cd05046 85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSN---ARFVHRDLAARNCLVSSQREVKVSLL 161 (275)
T ss_pred EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhh---cCcccCcCccceEEEeCCCcEEEccc
Confidence 999999999999998644321 268999999999999999999999 78999999999999999999999999
Q ss_pred ccccccccccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHh-CCCCCCCchHHHH--HHhhh
Q 003384 608 GISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQY--ALDTG 684 (824)
Q Consensus 608 Gla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELlt-G~~Pf~~~~~~~~--~~~~~ 684 (824)
|++.......... .....++..|+|||.+.+..++.++|||||||++|+|++ |..||........ ....+
T Consensus 162 ~~~~~~~~~~~~~-------~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~~ 234 (275)
T cd05046 162 SLSKDVYNSEYYK-------LRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAG 234 (275)
T ss_pred ccccccCcccccc-------cCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHHcC
Confidence 9987543221111 123346788999999988888999999999999999999 8889864332211 11111
Q ss_pred ccccccCCCCCCCChhhHHHHHHHHHHHhhhccCCCCChHHHHHHHH
Q 003384 685 KLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVL 731 (824)
Q Consensus 685 ~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~L 731 (824)
... ...+...+..+.+++.+||+.+|.+||++ .+++..|
T Consensus 235 ~~~-------~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~-~~~l~~l 273 (275)
T cd05046 235 KLE-------LPVPEGCPSRLYKLMTRCWAVNPKDRPSF-SELVSAL 273 (275)
T ss_pred CcC-------CCCCCCCCHHHHHHHHHHcCCCcccCCCH-HHHHHHh
Confidence 111 01123345789999999999999999999 5565544
No 254
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=5.2e-34 Score=309.55 Aligned_cols=248 Identities=24% Similarity=0.330 Sum_probs=189.5
Q ss_pred CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC-CCchhHHHHHHHHHhcCCCceeeEecccC--CceEEEEEe
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEY 538 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~Ey 538 (824)
..|...+.||.|+||.||+|... +..||+|.+..... .....+.+|+.+++.++||||+++++++. ...++||||
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~ 85 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 85 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence 36888899999999999999875 57899999875432 22346789999999999999999999884 468899999
Q ss_pred cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccc
Q 003384 539 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEI 618 (824)
Q Consensus 539 ~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~ 618 (824)
++ ++|.+++... ...+++..+..++.+++.||.|||+ ++|+||||||+|||++.++.+||+|||++........
T Consensus 86 ~~-~~l~~~l~~~--~~~~~~~~~~~~~~qi~~aL~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~ 159 (301)
T cd07873 86 LD-KDLKQYLDDC--GNSINMHNVKLFLFQLLRGLNYCHR---RKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTK 159 (301)
T ss_pred cc-cCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCCC
Confidence 97 5888887532 3468899999999999999999999 8999999999999999999999999999875432211
Q ss_pred cCCCccccccCCCCCCcccCChhhhccC-CCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhh---------cccc
Q 003384 619 SSNNTTLCCRTDPKGTFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTG---------KLKN 688 (824)
Q Consensus 619 ~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~---------~~~~ 688 (824)
. .....+++.|+|||++.+. .++.++|||||||++|+|+||++||............. .+..
T Consensus 160 ~--------~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (301)
T cd07873 160 T--------YSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPG 231 (301)
T ss_pred c--------ccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchh
Confidence 0 1233578999999998754 57889999999999999999999997554321110000 0000
Q ss_pred ccCC------CCC--------CCChhhHHHHHHHHHHHhhhccCCCCChHH
Q 003384 689 LLDP------LAG--------DWPFVQAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 689 ~ld~------~~~--------~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
++.. ... ......+..+.+|+.+|++.+|.+||++.+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~e 282 (301)
T cd07873 232 ILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEE 282 (301)
T ss_pred hhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHH
Confidence 0000 000 011223557899999999999999999843
No 255
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=5.9e-35 Score=294.17 Aligned_cols=265 Identities=24% Similarity=0.291 Sum_probs=205.2
Q ss_pred hhcCCCCccceeeecCceEEEEEEE--CCeEEEEEEecCCCCCCchhHHHHHHHHHhcCCCceeeEeccc-------CCc
Q 003384 461 GATHNFDPSLKIGEGGYGSIYKGLL--RHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC-------PEV 531 (824)
Q Consensus 461 ~~~~~f~~~~~LG~G~fG~Vykg~~--~~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~-------~~~ 531 (824)
...++|.+.+.||+|||+.||.+.. .+..+|+|++......+.+...+|++..++++||||+++++++ ...
T Consensus 18 In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~ 97 (302)
T KOG2345|consen 18 INNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHE 97 (302)
T ss_pred EcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCcee
Confidence 3456899999999999999998763 4678999999887777788899999999999999999999987 234
Q ss_pred eEEEEEecCCCChhhhhhccCC-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccc
Q 003384 532 WTLVYEYLPNGSLEDRLSCKDN-SPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGIS 610 (824)
Q Consensus 532 ~~LV~Ey~~ggsL~~~L~~~~~-~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla 610 (824)
.||++.|...|+|.+.+..... +..+++.+++.|+.++++||.+||...+ ++.||||||.|||+...+.++|.|||.+
T Consensus 98 ~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~-~yAH~DiKP~NILls~~~~~vl~D~GS~ 176 (302)
T KOG2345|consen 98 AYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEP-PYAHRDIKPANILLSDSGLPVLMDLGSA 176 (302)
T ss_pred EEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCC-cccccCCCcceeEecCCCceEEEeccCc
Confidence 7999999999999999976543 3479999999999999999999999664 6999999999999999999999999998
Q ss_pred cccccccccCC-CccccccCCCCCCcccCChhhhcc---CCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhh-c
Q 003384 611 RFLSQNEISSN-NTTLCCRTDPKGTFAYMDPEFLAS---GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTG-K 685 (824)
Q Consensus 611 ~~~~~~~~~~~-~~~~~~~~~~~GT~~Y~APE~l~~---~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~-~ 685 (824)
....-.-.... .......+....|..|.|||.+.- ...+.++|||||||+||.|+.|..||+.. +..| .
T Consensus 177 ~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~------~~~GgS 250 (302)
T KOG2345|consen 177 TQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERI------YQQGGS 250 (302)
T ss_pred cccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHH------hhcCCe
Confidence 75542221111 011111234457999999999854 45788999999999999999999999521 1222 2
Q ss_pred cccccCCCCCCCC--hhhHHHHHHHHHHHhhhccCCCCChHHHHHHHHHH
Q 003384 686 LKNLLDPLAGDWP--FVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEP 733 (824)
Q Consensus 686 ~~~~ld~~~~~~p--~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le~ 733 (824)
+.-.+-...-.|| ...++.+.+++..|++.+|.+||++ .+++..++.
T Consensus 251 laLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i-~~ll~~~d~ 299 (302)
T KOG2345|consen 251 LALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTI-PELLSKLDD 299 (302)
T ss_pred EEEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCH-HHHHHHHHh
Confidence 2111111111111 2267899999999999999999999 455555544
No 256
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=6e-34 Score=305.44 Aligned_cols=252 Identities=27% Similarity=0.361 Sum_probs=196.8
Q ss_pred ChhhHhhhcCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCCchhHHHHHHHHHhc-CCCceeeEecccC--
Q 003384 455 SFSEIEGATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKI-RHPNLVTLVGACP-- 529 (824)
Q Consensus 455 ~~~ei~~~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l-~HpnIv~L~g~~~-- 529 (824)
++.++....+.|+....||.|+||.||+|... +..||+|++.... .....+..|+.++.++ +||||+++++++.
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~ 85 (282)
T cd06636 7 DLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIKK 85 (282)
T ss_pred hhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcc
Confidence 44556667788999999999999999999885 5789999986543 2335688999999998 7999999999872
Q ss_pred ------CceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcce
Q 003384 530 ------EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSK 603 (824)
Q Consensus 530 ------~~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vK 603 (824)
+..++||||+++|+|.+++.... ...+++..+..++.|++.||.|||+ ++|+||||+|+||+++.++.++
T Consensus 86 ~~~~~~~~~~iv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH~---~~ivH~dl~~~nili~~~~~~~ 161 (282)
T cd06636 86 SPPGHDDQLWLVMEFCGAGSVTDLVKNTK-GNALKEDWIAYICREILRGLAHLHA---HKVIHRDIKGQNVLLTENAEVK 161 (282)
T ss_pred cccCCCCEEEEEEEeCCCCcHHHHHHHcc-CCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEE
Confidence 35789999999999999885432 3457888899999999999999999 8999999999999999999999
Q ss_pred eeccccccccccccccCCCccccccCCCCCCcccCChhhhc-----cCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHH
Q 003384 604 LSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLA-----SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQ 678 (824)
Q Consensus 604 L~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~-----~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~ 678 (824)
|+|||++........ ......|++.|+|||.+. ...++.++|||||||++|+|+||.+||.......
T Consensus 162 l~dfg~~~~~~~~~~--------~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~ 233 (282)
T cd06636 162 LVDFGVSAQLDRTVG--------RRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMR 233 (282)
T ss_pred EeeCcchhhhhcccc--------CCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHh
Confidence 999999875532211 012345899999999986 3467889999999999999999999996543322
Q ss_pred HHHhhhccccccCCCCCCCChhhHHHHHHHHHHHhhhccCCCCChH
Q 003384 679 YALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELG 724 (824)
Q Consensus 679 ~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~ 724 (824)
....... ... ....+...+..+.+|+.+||+.+|.+||++.
T Consensus 234 ~~~~~~~---~~~--~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ 274 (282)
T cd06636 234 ALFLIPR---NPP--PKLKSKKWSKKFIDFIEGCLVKNYLSRPSTE 274 (282)
T ss_pred hhhhHhh---CCC--CCCcccccCHHHHHHHHHHhCCChhhCcCHH
Confidence 2111110 000 0111123456899999999999999999984
No 257
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=5.5e-34 Score=300.74 Aligned_cols=247 Identities=25% Similarity=0.381 Sum_probs=196.0
Q ss_pred CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCC--CchhHHHHHHHHHhcCCCceeeEecccC----CceEEEE
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPNLVTLVGACP----EVWTLVY 536 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~--~~~~f~~Ei~iL~~l~HpnIv~L~g~~~----~~~~LV~ 536 (824)
+|+....||.|+||.||++... +..||+|.+...... ....+..|+.+++.++||||+++++++. ...+++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 4677889999999999999875 578999998754322 2346888999999999999999998762 2468999
Q ss_pred EecCCCChhhhhhcc-CCCCCCCHHHHHHHHHHHHHHHHHHhhcC--CCceEeccccCCcEEecCCCcceeecccccccc
Q 003384 537 EYLPNGSLEDRLSCK-DNSPPLSWQTRIRIATELCSVLIFLHSCK--PHSIVHGDLKPANILLDANFVSKLSDFGISRFL 613 (824)
Q Consensus 537 Ey~~ggsL~~~L~~~-~~~~~l~~~~~~~ia~qia~aL~~LH~~~--~~giiHrDLKp~NILld~~~~vKL~DFGla~~~ 613 (824)
||+++++|.+++... ....++++..++.++.+++.||.|||..+ ..+++|+||+|+||+++.++.+||+|||++...
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~ 160 (265)
T cd08217 81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKIL 160 (265)
T ss_pred hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccc
Confidence 999999999998543 22457899999999999999999999321 278999999999999999999999999999876
Q ss_pred ccccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCC
Q 003384 614 SQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPL 693 (824)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~ 693 (824)
...... .....|++.|+|||.+.+..++.++||||||+++|+|++|+.||........... .....
T Consensus 161 ~~~~~~--------~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~------~~~~~ 226 (265)
T cd08217 161 GHDSSF--------AKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASK------IKEGK 226 (265)
T ss_pred cCCccc--------ccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHH------HhcCC
Confidence 533210 1234589999999999988899999999999999999999999976542211111 01111
Q ss_pred CCCCChhhHHHHHHHHHHHhhhccCCCCChHH
Q 003384 694 AGDWPFVQAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 694 ~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
....+...+..+.+++.+|++.+|.+||++.+
T Consensus 227 ~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~ 258 (265)
T cd08217 227 FRRIPYRYSSELNEVIKSMLNVDPDKRPSTEE 258 (265)
T ss_pred CCCCccccCHHHHHHHHHHccCCcccCCCHHH
Confidence 22334455678999999999999999999944
No 258
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=8.6e-34 Score=302.31 Aligned_cols=248 Identities=25% Similarity=0.398 Sum_probs=191.5
Q ss_pred CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCC--C--------chhHHHHHHHHHhcCCCceeeEecccC--C
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ--G--------PSEFQQEIDILSKIRHPNLVTLVGACP--E 530 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~--~--------~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~ 530 (824)
+|...+.||.|+||.||+|... +..||||.+...... . .+.+..|+.+++.++||||+++++++. +
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 4666788999999999999764 678999987642111 0 135788999999999999999999884 4
Q ss_pred ceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccc
Q 003384 531 VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGIS 610 (824)
Q Consensus 531 ~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla 610 (824)
..++||||+++|+|.+++... ..+++..+..++.+++.||.|||+ ++++||||+|+||+++.++.+||+|||++
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~~~nil~~~~~~~~l~d~~~~ 155 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTY---GRFEEQLVRFFTEQVLEGLAYLHS---KGILHRDLKADNLLVDADGICKISDFGIS 155 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHhh---CCeeecCCChhhEEEcCCCeEEEeecccc
Confidence 688999999999999998533 568999999999999999999999 89999999999999999999999999998
Q ss_pred cccccccccCCCccccccCCCCCCcccCChhhhccCC--CCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhcccc
Q 003384 611 RFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGE--LTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKN 688 (824)
Q Consensus 611 ~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~--~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~ 688 (824)
.......... ......|+..|+|||.+.... ++.++||||||+++|+|++|..||................
T Consensus 156 ~~~~~~~~~~------~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~- 228 (272)
T cd06629 156 KKSDDIYDND------QNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKR- 228 (272)
T ss_pred cccccccccc------ccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccc-
Confidence 7653221110 112345899999999987654 8899999999999999999999997554433222211110
Q ss_pred ccCCCCCCCChhhHHHHHHHHHHHhhhccCCCCChHH
Q 003384 689 LLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 689 ~ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
.............+..+.+++.+||..+|.+||++.+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ 265 (272)
T cd06629 229 SAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTARE 265 (272)
T ss_pred cCCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHH
Confidence 0001111112234678999999999999999999843
No 259
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=8.5e-34 Score=312.07 Aligned_cols=252 Identities=18% Similarity=0.241 Sum_probs=186.1
Q ss_pred cceeeec--CceEEEEEEEC--CeEEEEEEecCCCCCC--chhHHHHHHHHHhcCCCceeeEeccc--CCceEEEEEecC
Q 003384 469 SLKIGEG--GYGSIYKGLLR--HMQVAIKMLHPHSLQG--PSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYLP 540 (824)
Q Consensus 469 ~~~LG~G--~fG~Vykg~~~--~~~VAvK~l~~~~~~~--~~~f~~Ei~iL~~l~HpnIv~L~g~~--~~~~~LV~Ey~~ 540 (824)
..+||+| +||+||++..+ +..||||++....... ...+.+|+.+++.++||||++++++| .+..++||||++
T Consensus 3 ~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~ 82 (327)
T cd08227 3 LTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMA 82 (327)
T ss_pred hhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEeccC
Confidence 4579999 78999999875 5789999987543221 24577899999999999999999988 456889999999
Q ss_pred CCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccccC
Q 003384 541 NGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISS 620 (824)
Q Consensus 541 ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~~ 620 (824)
+|+|.+++.... ...+++..+..++.|++.||.|||+ ++|+||||||+|||++.++.++++|||.+..........
T Consensus 83 ~~~l~~~~~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~---~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~ 158 (327)
T cd08227 83 YGSAKDLICTHF-MDGMSELAIAYILQGVLKALDYIHH---MGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRL 158 (327)
T ss_pred CCcHHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCChhhEEEecCCcEEEcccchhhccccccccc
Confidence 999999985332 2358999999999999999999999 899999999999999999999999998765432211111
Q ss_pred CCccccccCCCCCCcccCChhhhcc--CCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHh--hhccccccCC----
Q 003384 621 NNTTLCCRTDPKGTFAYMDPEFLAS--GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALD--TGKLKNLLDP---- 692 (824)
Q Consensus 621 ~~~~~~~~~~~~GT~~Y~APE~l~~--~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~--~~~~~~~ld~---- 692 (824)
... ........++..|+|||++.+ ..++.++|||||||++|||++|++||........... .+.....++.
T Consensus 159 ~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (327)
T cd08227 159 RVV-HDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIP 237 (327)
T ss_pred ccc-ccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccchh
Confidence 000 000122357888999999976 4689999999999999999999999975432211111 1111111100
Q ss_pred ---------------------------------CCCCCChhhHHHHHHHHHHHhhhccCCCCChHH
Q 003384 693 ---------------------------------LAGDWPFVQAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 693 ---------------------------------~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
.........+..+.+|+.+||+.+|.+||++.+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e 303 (327)
T cd08227 238 AEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSAST 303 (327)
T ss_pred hhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHH
Confidence 000111123468999999999999999999943
No 260
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=8.8e-34 Score=302.57 Aligned_cols=247 Identities=23% Similarity=0.405 Sum_probs=183.1
Q ss_pred eeeecCceEEEEEEECC----eEEEEEEecCCCC-CCchhHHHHHHHHHhcCCCceeeEecccC--CceEEEEEecCCCC
Q 003384 471 KIGEGGYGSIYKGLLRH----MQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYLPNGS 543 (824)
Q Consensus 471 ~LG~G~fG~Vykg~~~~----~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~Ey~~ggs 543 (824)
.||+|+||.||+|...+ ..+++|.+..... .....|.+|+.+++.++||||+++++.|. ...++||||+++|+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 81 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD 81 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence 59999999999997532 3467777664332 23457999999999999999999999985 45789999999999
Q ss_pred hhhhhhccC-CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccccCCC
Q 003384 544 LEDRLSCKD-NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNN 622 (824)
Q Consensus 544 L~~~L~~~~-~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~~~~ 622 (824)
|.+++.... ....++...+..++.+++.||.|||+ .+++||||||+|||++.++.+||+|||++..........
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~---~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~-- 156 (268)
T cd05086 82 LKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHK---HNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIE-- 156 (268)
T ss_pred HHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHH---CCeeccCCccceEEEcCCccEEecccccccccCcchhhh--
Confidence 999986432 23456777788999999999999999 889999999999999999999999999986432211100
Q ss_pred ccccccCCCCCCcccCChhhhcc-------CCCCcchhHHhHHHHHHHHHh-CCCCCCCchHHHHH--HhhhccccccCC
Q 003384 623 TTLCCRTDPKGTFAYMDPEFLAS-------GELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYA--LDTGKLKNLLDP 692 (824)
Q Consensus 623 ~~~~~~~~~~GT~~Y~APE~l~~-------~~~t~ksDVwSlGvvL~ELlt-G~~Pf~~~~~~~~~--~~~~~~~~~ld~ 692 (824)
......|+..|+|||++.. ..++.++|||||||++|||++ |.+||......... ...+....+.++
T Consensus 157 ----~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 232 (268)
T cd05086 157 ----TEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKP 232 (268)
T ss_pred ----cccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCC
Confidence 0123457899999998743 245778999999999999997 57788654332211 111112222222
Q ss_pred CCCCCChhhHHHHHHHHHHHhhhccCCCCChHHHHHHHH
Q 003384 693 LAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVL 731 (824)
Q Consensus 693 ~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~L 731 (824)
..+......+.+++..|| .+|.+||++ +++++.|
T Consensus 233 ---~~~~~~~~~~~~l~~~c~-~~P~~Rp~~-~~i~~~l 266 (268)
T cd05086 233 ---QLELPYSERWYEVLQFCW-LSPEKRATA-EEVHRLL 266 (268)
T ss_pred ---ccCCCCcHHHHHHHHHHh-hCcccCCCH-HHHHHHh
Confidence 223335678889999999 679999999 5666554
No 261
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=4.6e-34 Score=303.16 Aligned_cols=249 Identities=23% Similarity=0.387 Sum_probs=194.1
Q ss_pred CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCC------CchhHHHHHHHHHhcCCCceeeEecccC--CceEE
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ------GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTL 534 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~------~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~L 534 (824)
+|+....||+|+||.||+|... +..||+|++...... ....+.+|+.+++.++||||+++++++. +..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 4777889999999999999864 578999998653321 1346889999999999999999999984 46789
Q ss_pred EEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCC-cceeecccccccc
Q 003384 535 VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANF-VSKLSDFGISRFL 613 (824)
Q Consensus 535 V~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~-~vKL~DFGla~~~ 613 (824)
||||+++++|.+++.. ..++++..+..++.|++.||.|||+ ++++|+||+|.||+++.++ .+||+|||++..+
T Consensus 81 v~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~ql~~al~~LH~---~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~ 154 (268)
T cd06630 81 FVEWMAGGSVSHLLSK---YGAFKEAVIINYTEQLLRGLSYLHE---NQIIHRDVKGANLLIDSTGQRLRIADFGAAARL 154 (268)
T ss_pred EEeccCCCcHHHHHHH---hCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEEccccccccc
Confidence 9999999999999853 3468899999999999999999999 8999999999999998776 6999999999876
Q ss_pred ccccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCC
Q 003384 614 SQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPL 693 (824)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~ 693 (824)
......... ......||..|+|||.+.+..++.++|||||||++|+|++|.+||................ ....
T Consensus 155 ~~~~~~~~~----~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~--~~~~ 228 (268)
T cd06630 155 AAKGTGAGE----FQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIA--SATT 228 (268)
T ss_pred ccccccCCc----cccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHh--ccCC
Confidence 543211111 1123468999999999988889999999999999999999999996432211000000000 0011
Q ss_pred CCCCChhhHHHHHHHHHHHhhhccCCCCChHH
Q 003384 694 AGDWPFVQAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 694 ~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
....+...+..+.+++.+|+..+|.+||++.+
T Consensus 229 ~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ 260 (268)
T cd06630 229 APSIPEHLSPGLRDVTLRCLELQPEDRPPSRE 260 (268)
T ss_pred CCCCchhhCHHHHHHHHHHcCCCcccCcCHHH
Confidence 22344456678999999999999999999943
No 262
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.2e-34 Score=318.21 Aligned_cols=221 Identities=24% Similarity=0.302 Sum_probs=175.0
Q ss_pred CCCccceeeecCceEEEEEEE--CCeEEEEEEecCCCCCC---chhHHHHHHHHHhcCCCceeeEecccC--CceEEEEE
Q 003384 465 NFDPSLKIGEGGYGSIYKGLL--RHMQVAIKMLHPHSLQG---PSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYE 537 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~--~~~~VAvK~l~~~~~~~---~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~E 537 (824)
-|..++.||-|+||+|.++.- ++..+|+|.+.+.+... ...++.|.+||...+.++||+||..|. +.+|+||+
T Consensus 630 mFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVMd 709 (1034)
T KOG0608|consen 630 MFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 709 (1034)
T ss_pred ceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEEe
Confidence 466678899999999998854 35679999987754322 346789999999999999999999995 47999999
Q ss_pred ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccccc
Q 003384 538 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNE 617 (824)
Q Consensus 538 y~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~ 617 (824)
|++||++..+|.. .+-|.+.....++.++.+|+.++|. .|+|||||||+|||||.+|++||.|||||..+.-..
T Consensus 710 YIPGGDmMSLLIr---mgIFeE~LARFYIAEltcAiesVHk---mGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTH 783 (1034)
T KOG0608|consen 710 YIPGGDMMSLLIR---MGIFEEDLARFYIAELTCAIESVHK---MGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH 783 (1034)
T ss_pred ccCCccHHHHHHH---hccCHHHHHHHHHHHHHHHHHHHHh---ccceecccCccceEEccCCceeeeeccccccceecc
Confidence 9999999999953 3457888888899999999999999 999999999999999999999999999997553111
Q ss_pred ccCCCc----------------------------------cccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHH
Q 003384 618 ISSNNT----------------------------------TLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLR 663 (824)
Q Consensus 618 ~~~~~~----------------------------------~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~E 663 (824)
.+.... ..+..-..+||+.|+|||++...+|+..||+||.||||||
T Consensus 784 dskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~e 863 (1034)
T KOG0608|consen 784 DSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYE 863 (1034)
T ss_pred ccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHH
Confidence 110000 0011123479999999999999999999999999999999
Q ss_pred HHhCCCCCCCchHHHHHHhhhccccccC
Q 003384 664 LLTGRPALGITKEVQYALDTGKLKNLLD 691 (824)
Q Consensus 664 LltG~~Pf~~~~~~~~~~~~~~~~~~ld 691 (824)
|+.|++||-.............+...++
T Consensus 864 m~~g~~pf~~~tp~~tq~kv~nw~~~l~ 891 (1034)
T KOG0608|consen 864 MLVGQPPFLADTPGETQYKVINWRNFLH 891 (1034)
T ss_pred HhhCCCCccCCCCCcceeeeeehhhccc
Confidence 9999999965544333333333444444
No 263
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=3.6e-34 Score=307.26 Aligned_cols=247 Identities=27% Similarity=0.369 Sum_probs=191.1
Q ss_pred CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCC--CchhHHHHHHHHHhcCCCceeeEecccC--CceEEEEEe
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEY 538 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~--~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~Ey 538 (824)
+|+..++||+|+||.||+|.+. +..||+|++...... ..+.+.+|+++++.++||||++++++|. ...++||||
T Consensus 2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 81 (286)
T cd07846 2 KYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFEF 81 (286)
T ss_pred ceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEec
Confidence 5778899999999999999985 588999987654322 2456889999999999999999999984 468999999
Q ss_pred cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccc
Q 003384 539 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEI 618 (824)
Q Consensus 539 ~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~ 618 (824)
+++++|.++... ...+++..+..++.+++.||.|||+ .+++||||+|+||+++.++.+||+|||++..+.....
T Consensus 82 ~~~~~l~~~~~~---~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~ 155 (286)
T cd07846 82 VDHTVLDDLEKY---PNGLDESRVRKYLFQILRGIEFCHS---HNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE 155 (286)
T ss_pred CCccHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCcc
Confidence 999999887632 2348999999999999999999999 8999999999999999999999999999886543321
Q ss_pred cCCCccccccCCCCCCcccCChhhhcc-CCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhc----c----c--
Q 003384 619 SSNNTTLCCRTDPKGTFAYMDPEFLAS-GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGK----L----K-- 687 (824)
Q Consensus 619 ~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~----~----~-- 687 (824)
. .....|+..|+|||++.+ ..++.++|||||||++|+|++|++||.............. + .
T Consensus 156 ~--------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (286)
T cd07846 156 V--------YTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEI 227 (286)
T ss_pred c--------cCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHH
Confidence 1 123457899999999875 4578899999999999999999999975543221111100 0 0
Q ss_pred --------cccCCCCC------CCChhhHHHHHHHHHHHhhhccCCCCChHH
Q 003384 688 --------NLLDPLAG------DWPFVQAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 688 --------~~ld~~~~------~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
....+... ......+..+.+|+.+||+.+|.+||++.+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~ 279 (286)
T cd07846 228 FQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQ 279 (286)
T ss_pred hccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHH
Confidence 00000000 001133567999999999999999999943
No 264
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=8.4e-34 Score=301.35 Aligned_cols=249 Identities=30% Similarity=0.388 Sum_probs=195.0
Q ss_pred hhcCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCCchhHHHHHHHHHhc-CCCceeeEecccCC-------
Q 003384 461 GATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKI-RHPNLVTLVGACPE------- 530 (824)
Q Consensus 461 ~~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l-~HpnIv~L~g~~~~------- 530 (824)
..+++|...+.||.|+||.||+|... +..+++|++..... ....+.+|+.+++++ +||||++++++|..
T Consensus 3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (275)
T cd06608 3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGND 81 (275)
T ss_pred CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcc
Confidence 45678999999999999999999985 47899999875432 345789999999999 79999999998832
Q ss_pred -ceEEEEEecCCCChhhhhhccC-CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccc
Q 003384 531 -VWTLVYEYLPNGSLEDRLSCKD-NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFG 608 (824)
Q Consensus 531 -~~~LV~Ey~~ggsL~~~L~~~~-~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFG 608 (824)
..++||||+++++|.+++.... ....+++..+..++.|++.||.|||+ .+++||||+|+||+++.++.+||+|||
T Consensus 82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~---~~i~H~~l~p~ni~~~~~~~~~l~d~~ 158 (275)
T cd06608 82 DQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHE---NKVIHRDIKGQNILLTKNAEVKLVDFG 158 (275)
T ss_pred eEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHHHEEEccCCeEEECCCc
Confidence 3689999999999999885422 24568999999999999999999999 899999999999999999999999999
Q ss_pred cccccccccccCCCccccccCCCCCCcccCChhhhcc-----CCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhh
Q 003384 609 ISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLAS-----GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDT 683 (824)
Q Consensus 609 la~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-----~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~ 683 (824)
++......... .....|+..|+|||++.. ..++.++|||||||+||+|+||++||............
T Consensus 159 ~~~~~~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~ 230 (275)
T cd06608 159 VSAQLDSTLGR--------RNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKI 230 (275)
T ss_pred cceecccchhh--------hcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHh
Confidence 98765432111 123458999999998854 34678899999999999999999999654322211111
Q ss_pred hccccccCCCCCCCChhhHHHHHHHHHHHhhhccCCCCChHH
Q 003384 684 GKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 684 ~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
.... +.....+...+..+.+|+.+||..+|.+||++.+
T Consensus 231 ---~~~~-~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ 268 (275)
T cd06608 231 ---PRNP-PPTLKSPENWSKKFNDFISECLIKNYEQRPFMEE 268 (275)
T ss_pred ---hccC-CCCCCchhhcCHHHHHHHHHHhhcChhhCcCHHH
Confidence 0000 0011112234568999999999999999999943
No 265
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=3.4e-34 Score=310.37 Aligned_cols=242 Identities=23% Similarity=0.334 Sum_probs=192.2
Q ss_pred CCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCCchhHHHHHHHHHhcCCCceeeEeccc--CCceEEEEEecCC
Q 003384 466 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYLPN 541 (824)
Q Consensus 466 f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~--~~~~~LV~Ey~~g 541 (824)
|.....||+|+||.||++... +..||||.+........+.+.+|+.+++.++||||+++++.+ .+..++||||+++
T Consensus 24 ~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~ 103 (292)
T cd06658 24 LDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEG 103 (292)
T ss_pred HhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCC
Confidence 444567999999999999874 578999998655444455788999999999999999999987 4578999999999
Q ss_pred CChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccccCC
Q 003384 542 GSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSN 621 (824)
Q Consensus 542 gsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~~~ 621 (824)
++|.+++. ...+++..+..++.+++.||.|||+ ++|+||||||+||+++.++.+||+|||++.........
T Consensus 104 ~~L~~~~~----~~~l~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~-- 174 (292)
T cd06658 104 GALTDIVT----HTRMNEEQIATVCLSVLRALSYLHN---QGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPK-- 174 (292)
T ss_pred CcHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEcCCCCEEEccCcchhhccccccc--
Confidence 99999873 2358899999999999999999999 89999999999999999999999999998754322111
Q ss_pred CccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCCCCChhh
Q 003384 622 NTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQ 701 (824)
Q Consensus 622 ~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~ 701 (824)
.....|+..|+|||++.+..++.++|||||||++|||++|+.||........... +...+.+.. ......
T Consensus 175 ------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~---~~~~~~~~~-~~~~~~ 244 (292)
T cd06658 175 ------RKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRR---IRDNLPPRV-KDSHKV 244 (292)
T ss_pred ------CceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH---HHhcCCCcc-cccccc
Confidence 1224589999999999888899999999999999999999999975543322111 111111111 112234
Q ss_pred HHHHHHHHHHHhhhccCCCCChHHH
Q 003384 702 AEQLANLAMRCCEMSRKSRPELGKD 726 (824)
Q Consensus 702 ~~~l~~Li~~Cl~~~P~~RPt~~~~ 726 (824)
+..+.+++.+||..+|.+||++.+.
T Consensus 245 ~~~~~~li~~~l~~~P~~Rpt~~~i 269 (292)
T cd06658 245 SSVLRGFLDLMLVREPSQRATAQEL 269 (292)
T ss_pred CHHHHHHHHHHccCChhHCcCHHHH
Confidence 5678999999999999999999443
No 266
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=1.7e-33 Score=297.87 Aligned_cols=247 Identities=31% Similarity=0.456 Sum_probs=194.4
Q ss_pred CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCC--CchhHHHHHHHHHhcCCCceeeEeccc--CCceEEEEEe
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEY 538 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~--~~~~f~~Ei~iL~~l~HpnIv~L~g~~--~~~~~LV~Ey 538 (824)
+|...+.||+|+||.||+|... +..|++|.+...... ....+..|+.+++.++||||+++++.+ .+..++|+||
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY 80 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence 4677889999999999999874 578999998765443 356789999999999999999999987 4568899999
Q ss_pred cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccc
Q 003384 539 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEI 618 (824)
Q Consensus 539 ~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~ 618 (824)
+++++|.+++.. ...+++..+..++.+++.||.|||+ .+|+|+||+|.||+++.++.+||+|||++........
T Consensus 81 ~~~~~L~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lh~---~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~ 154 (264)
T cd06626 81 CSGGTLEELLEH---GRILDEHVIRVYTLQLLEGLAYLHS---HGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTT 154 (264)
T ss_pred CCCCcHHHHHhh---cCCCChHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEcccccccccCCCCC
Confidence 999999999853 3457889999999999999999999 8999999999999999999999999999987654332
Q ss_pred cCCCccccccCCCCCCcccCChhhhccCC---CCcchhHHhHHHHHHHHHhCCCCCCCch-HHHHHHhhhccccccCCCC
Q 003384 619 SSNNTTLCCRTDPKGTFAYMDPEFLASGE---LTPKSDVYSFGIILLRLLTGRPALGITK-EVQYALDTGKLKNLLDPLA 694 (824)
Q Consensus 619 ~~~~~~~~~~~~~~GT~~Y~APE~l~~~~---~t~ksDVwSlGvvL~ELltG~~Pf~~~~-~~~~~~~~~~~~~~ld~~~ 694 (824)
..... .....|+..|+|||++.+.. ++.++||||||+++|+|++|++||.... .......... ...+..
T Consensus 155 ~~~~~----~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~---~~~~~~ 227 (264)
T cd06626 155 TMGEE----VQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGA---GHKPPI 227 (264)
T ss_pred ccccc----ccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhc---CCCCCC
Confidence 11110 12345889999999998766 8899999999999999999999996442 2111111111 001111
Q ss_pred CCCChhhHHHHHHHHHHHhhhccCCCCChHH
Q 003384 695 GDWPFVQAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 695 ~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
.. ....+..+.+++.+||+.+|.+||++.+
T Consensus 228 ~~-~~~~~~~~~~li~~~l~~~p~~R~~~~~ 257 (264)
T cd06626 228 PD-SLQLSPEGKDFLDRCLESDPKKRPTASE 257 (264)
T ss_pred Cc-ccccCHHHHHHHHHHccCCcccCCCHHH
Confidence 11 1123678899999999999999999943
No 267
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=9.1e-34 Score=299.13 Aligned_cols=244 Identities=23% Similarity=0.348 Sum_probs=194.8
Q ss_pred CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC--CCchhHHHHHHHHHhcCCCceeeEecccC--CceEEEEEe
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEY 538 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~--~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~Ey 538 (824)
+|+..+.||+|+||.||++... +..||+|.+..... .....+.+|+.++++++||||+++++++. +..++||||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY 80 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence 4778889999999999999874 57899999865322 22357899999999999999999999884 468899999
Q ss_pred cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccc
Q 003384 539 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEI 618 (824)
Q Consensus 539 ~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~ 618 (824)
+++++|.+++... ....+++..++.++.+++.||.|||+ ++++|+||+|+|||++.++.++|+|||++..+.....
T Consensus 81 ~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~ 156 (256)
T cd08218 81 CEGGDLYKKINAQ-RGVLFPEDQILDWFVQICLALKHVHD---RKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVE 156 (256)
T ss_pred CCCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCEEEeeccceeecCcchh
Confidence 9999999988532 22357899999999999999999999 8999999999999999999999999999986543221
Q ss_pred cCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCCCCC
Q 003384 619 SSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWP 698 (824)
Q Consensus 619 ~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p 698 (824)
. .....|++.|+|||++.+..++.++|||||||++|+|+||+.||............ +.......+
T Consensus 157 ~--------~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~------~~~~~~~~~ 222 (256)
T cd08218 157 L--------ARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKI------IRGSYPPVS 222 (256)
T ss_pred h--------hhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHH------hcCCCCCCc
Confidence 1 12235889999999999888999999999999999999999999654332211111 111111223
Q ss_pred hhhHHHHHHHHHHHhhhccCCCCChHHH
Q 003384 699 FVQAEQLANLAMRCCEMSRKSRPELGKD 726 (824)
Q Consensus 699 ~~~~~~l~~Li~~Cl~~~P~~RPt~~~~ 726 (824)
...+..+.+++.+||+.+|.+||++.+.
T Consensus 223 ~~~~~~~~~li~~~l~~~p~~Rp~~~~v 250 (256)
T cd08218 223 SHYSYDLRNLVSQLFKRNPRDRPSVNSI 250 (256)
T ss_pred ccCCHHHHHHHHHHhhCChhhCcCHHHH
Confidence 3456789999999999999999999443
No 268
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1e-34 Score=294.88 Aligned_cols=244 Identities=27% Similarity=0.445 Sum_probs=197.0
Q ss_pred CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCC----Cc----hhHHHHHHHHHhc-CCCceeeEecccCC--
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ----GP----SEFQQEIDILSKI-RHPNLVTLVGACPE-- 530 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~----~~----~~f~~Ei~iL~~l-~HpnIv~L~g~~~~-- 530 (824)
.+|.+.+.||.|+.++|.+...+ +..+|+|++...... .. +.-.+|+.||+++ .||||++|.+++..
T Consensus 17 ~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~s 96 (411)
T KOG0599|consen 17 AKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDA 96 (411)
T ss_pred hhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcc
Confidence 35777788999999999887665 578999988653221 12 2345799999998 59999999999854
Q ss_pred ceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccc
Q 003384 531 VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGIS 610 (824)
Q Consensus 531 ~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla 610 (824)
.+++|+|.|+.|.|.|+|. ....+++....+|+.++..|+.|||. ++||||||||+|||+|+|..+||+|||+|
T Consensus 97 F~FlVFdl~prGELFDyLt---s~VtlSEK~tR~iMrqlfegVeylHa---~~IVHRDLKpENILlddn~~i~isDFGFa 170 (411)
T KOG0599|consen 97 FVFLVFDLMPRGELFDYLT---SKVTLSEKETRRIMRQLFEGVEYLHA---RNIVHRDLKPENILLDDNMNIKISDFGFA 170 (411)
T ss_pred hhhhhhhhcccchHHHHhh---hheeecHHHHHHHHHHHHHHHHHHHH---hhhhhcccChhheeeccccceEEecccee
Confidence 5779999999999999994 44678999999999999999999999 89999999999999999999999999999
Q ss_pred cccccccccCCCccccccCCCCCCcccCChhhhcc------CCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHH--Hh
Q 003384 611 RFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLAS------GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYA--LD 682 (824)
Q Consensus 611 ~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~------~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~--~~ 682 (824)
+.+..++.. ....|||+|+|||.+.. .+|+..+|+|++|||||.|+.|-|||.....+... +.
T Consensus 171 ~~l~~GekL---------relCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~Im 241 (411)
T KOG0599|consen 171 CQLEPGEKL---------RELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIM 241 (411)
T ss_pred eccCCchhH---------HHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHH
Confidence 988765421 34569999999998843 46889999999999999999999999766554322 22
Q ss_pred hhccccccCCCCCCCChhhHHHHHHHHHHHhhhccCCCCChHHHH
Q 003384 683 TGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDV 727 (824)
Q Consensus 683 ~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v 727 (824)
+|+. ....+.| .+.+....+|+.+||+.+|.+|.|..+.+
T Consensus 242 eGky----qF~speW-adis~~~KdLIsrlLqVdp~~Ritake~L 281 (411)
T KOG0599|consen 242 EGKY----QFRSPEW-ADISATVKDLISRLLQVDPTKRITAKEAL 281 (411)
T ss_pred hccc----ccCCcch-hhccccHHHHHHHHHeeCchhcccHHHHh
Confidence 3322 2233344 34567899999999999999999985544
No 269
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=9.5e-34 Score=301.49 Aligned_cols=250 Identities=23% Similarity=0.411 Sum_probs=193.6
Q ss_pred CCCccceeeecCceEEEEEEECC---eEEEEEEecCCCCC----------CchhHHHHHHHHHh-cCCCceeeEecccC-
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLRH---MQVAIKMLHPHSLQ----------GPSEFQQEIDILSK-IRHPNLVTLVGACP- 529 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~~---~~VAvK~l~~~~~~----------~~~~f~~Ei~iL~~-l~HpnIv~L~g~~~- 529 (824)
+|+..+.||+|+||.||+|...+ ..+|+|.+...... ....+..|+.++.+ ++||||++++++|.
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 36777889999999999998854 77999987643211 12346778888875 79999999999883
Q ss_pred -CceEEEEEecCCCChhhhhhcc-CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecc
Q 003384 530 -EVWTLVYEYLPNGSLEDRLSCK-DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDF 607 (824)
Q Consensus 530 -~~~~LV~Ey~~ggsL~~~L~~~-~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DF 607 (824)
+..++||||++|++|.+++... .....+++..++.++.+++.||.|||.. .+++|+||+|.|||++.++.+||+||
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~--~~i~H~dl~~~nil~~~~~~~~l~df 158 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKE--KRIVHRDLTPNNIMLGEDDKVTITDF 158 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccC--CceeecCCCHHHEEECCCCcEEEecc
Confidence 4688999999999999987532 2345689999999999999999999952 57999999999999999999999999
Q ss_pred ccccccccccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccc
Q 003384 608 GISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLK 687 (824)
Q Consensus 608 Gla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~ 687 (824)
|++........ .....|+..|+|||++.+..++.++||||||+++|+|++|++||............. .
T Consensus 159 g~~~~~~~~~~---------~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~--~ 227 (269)
T cd08528 159 GLAKQKQPESK---------LTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIV--E 227 (269)
T ss_pred cceeecccccc---------cccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHh--h
Confidence 99986543320 123458999999999998889999999999999999999999997554322111110 0
Q ss_pred cccCCCCCCCChhhHHHHHHHHHHHhhhccCCCCChHHHHHHHH
Q 003384 688 NLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVL 731 (824)
Q Consensus 688 ~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~L 731 (824)
....+.. ....+..+.+++.+||+.+|.+||++ .++..++
T Consensus 228 ~~~~~~~---~~~~~~~l~~li~~cl~~~p~~Rp~~-~e~~~~~ 267 (269)
T cd08528 228 AVYEPLP---EGMYSEDVTDVITSCLTPDAEARPDI-IQVSAMI 267 (269)
T ss_pred ccCCcCC---cccCCHHHHHHHHHHCCCCCccCCCH-HHHHHHh
Confidence 1111111 11345689999999999999999999 5565554
No 270
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=2.3e-33 Score=302.44 Aligned_cols=245 Identities=27% Similarity=0.337 Sum_probs=192.0
Q ss_pred CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC-CCchhHHHHHHHHHhcCCCceeeEecccC----CceEEEEE
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGACP----EVWTLVYE 537 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~----~~~~LV~E 537 (824)
+|...+.||.|+||.||+|... +..||+|.+..... .....+.+|+++++.++||||++++++|. ...++|||
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e 81 (287)
T cd06621 2 KIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAME 81 (287)
T ss_pred ceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEE
Confidence 5778889999999999999985 58899999875433 22456899999999999999999999873 25789999
Q ss_pred ecCCCChhhhhhcc-CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccc
Q 003384 538 YLPNGSLEDRLSCK-DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQN 616 (824)
Q Consensus 538 y~~ggsL~~~L~~~-~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~ 616 (824)
|+++++|.+++... .....++...+..++.+++.||.|||. .+++|+||+|.||+++.++.++|+|||++......
T Consensus 82 ~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~---~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~ 158 (287)
T cd06621 82 YCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHS---RKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNS 158 (287)
T ss_pred ecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEecCCeEEEeecccccccccc
Confidence 99999999887532 234568889999999999999999999 89999999999999999999999999998754322
Q ss_pred cccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchH-----HH--HHHhhhccccc
Q 003384 617 EISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKE-----VQ--YALDTGKLKNL 689 (824)
Q Consensus 617 ~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~-----~~--~~~~~~~~~~~ 689 (824)
.. ....++..|+|||.+.+..++.++|||||||++|+|++|..||..... .. ..........+
T Consensus 159 ~~----------~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (287)
T cd06621 159 LA----------GTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPEL 228 (287)
T ss_pred cc----------ccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhh
Confidence 11 123478899999999988999999999999999999999999975421 11 10011000010
Q ss_pred cCCCCCCCChhhHHHHHHHHHHHhhhccCCCCChH
Q 003384 690 LDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELG 724 (824)
Q Consensus 690 ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~ 724 (824)
.+... .....+..+.+++.+||..+|.+||++.
T Consensus 229 ~~~~~--~~~~~~~~~~~li~~~l~~~p~~Rpt~~ 261 (287)
T cd06621 229 KDEPG--NGIKWSEEFKDFIKQCLEKDPTRRPTPW 261 (287)
T ss_pred ccCCC--CCCchHHHHHHHHHHHcCCCcccCCCHH
Confidence 00000 0012356899999999999999999994
No 271
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=1.1e-33 Score=303.62 Aligned_cols=247 Identities=28% Similarity=0.366 Sum_probs=193.6
Q ss_pred CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCC--CCCchhHHHHHHHHHhcCCCceeeEecccC--CceEEEEEe
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS--LQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEY 538 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~--~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~Ey 538 (824)
+|+..+.||+|+||.||+|... +..||||.++... ......+.+|+++++.++||||+++++++. +..++||||
T Consensus 2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 81 (288)
T cd07833 2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEY 81 (288)
T ss_pred ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEec
Confidence 6888899999999999999886 5789999987532 222457899999999999999999999984 468999999
Q ss_pred cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccc
Q 003384 539 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEI 618 (824)
Q Consensus 539 ~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~ 618 (824)
++++.|..++. ....+++..+..++.+++.||.|||. ++++||||+|+||+++.++.+||+|||++........
T Consensus 82 ~~~~~l~~~~~---~~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~ 155 (288)
T cd07833 82 VERTLLELLEA---SPGGLPPDAVRSYIWQLLQAIAYCHS---HNIIHRDIKPENILVSESGVLKLCDFGFARALRARPA 155 (288)
T ss_pred CCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCCEEEEeeecccccCCCcc
Confidence 99877766553 23458899999999999999999999 8999999999999999999999999999887654321
Q ss_pred cCCCccccccCCCCCCcccCChhhhccC-CCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccc----------
Q 003384 619 SSNNTTLCCRTDPKGTFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLK---------- 687 (824)
Q Consensus 619 ~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~---------- 687 (824)
.. .....|+..|+|||++.+. .++.++||||||+++|+|++|++||................
T Consensus 156 ~~-------~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (288)
T cd07833 156 SP-------LTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQEL 228 (288)
T ss_pred cc-------ccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhh
Confidence 00 1234578999999999888 88999999999999999999999997654432221111000
Q ss_pred ----------cccCCC-----CCCCChhhHHHHHHHHHHHhhhccCCCCChH
Q 003384 688 ----------NLLDPL-----AGDWPFVQAEQLANLAMRCCEMSRKSRPELG 724 (824)
Q Consensus 688 ----------~~ld~~-----~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~ 724 (824)
...... ...++...+..+.+|+.+||..+|.+||++.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ 280 (288)
T cd07833 229 FSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCD 280 (288)
T ss_pred cccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHH
Confidence 000000 0012233467899999999999999999984
No 272
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=1e-33 Score=306.63 Aligned_cols=245 Identities=25% Similarity=0.381 Sum_probs=196.2
Q ss_pred CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCCchhHHHHHHHHHhcCCCceeeEeccc--CCceEEEEEec
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYL 539 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~--~~~~~LV~Ey~ 539 (824)
++|...+.||+|+||.||+|... +..||+|.+..........+.+|+.+++.++||||++++++| .+..++|+||+
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~ 98 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYL 98 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecC
Confidence 57888899999999999999864 578999998755444456789999999999999999999988 45689999999
Q ss_pred CCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccccccc
Q 003384 540 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEIS 619 (824)
Q Consensus 540 ~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~ 619 (824)
++++|.+++.. ..+++..+..++.+++.||.|||+ +|++||||||+||+++.++.+||+|||++.........
T Consensus 99 ~~~~L~~~~~~----~~l~~~~~~~i~~~l~~al~~LH~---~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~~ 171 (293)
T cd06647 99 AGGSLTDVVTE----TCMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK 171 (293)
T ss_pred CCCcHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHh---CCEeeccCCHHHEEEcCCCCEEEccCcceecccccccc
Confidence 99999999842 347888999999999999999999 89999999999999999999999999998765432211
Q ss_pred CCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCCCCCh
Q 003384 620 SNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPF 699 (824)
Q Consensus 620 ~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~ 699 (824)
.....|++.|+|||++....++.++|||||||++|+|++|++||............+.. .......+.
T Consensus 172 --------~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~----~~~~~~~~~ 239 (293)
T cd06647 172 --------RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATN----GTPELQNPE 239 (293)
T ss_pred --------cccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhcC----CCCCCCCcc
Confidence 12345889999999998888999999999999999999999999765432211111000 000011122
Q ss_pred hhHHHHHHHHHHHhhhccCCCCChHHHH
Q 003384 700 VQAEQLANLAMRCCEMSRKSRPELGKDV 727 (824)
Q Consensus 700 ~~~~~l~~Li~~Cl~~~P~~RPt~~~~v 727 (824)
..+..+.+++.+||..+|.+||++.+.+
T Consensus 240 ~~~~~l~~li~~~l~~~p~~Rp~~~~il 267 (293)
T cd06647 240 KLSAIFRDFLNRCLEMDVEKRGSAKELL 267 (293)
T ss_pred ccCHHHHHHHHHHccCChhhCcCHHHHh
Confidence 3456799999999999999999995443
No 273
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=1.8e-33 Score=302.66 Aligned_cols=247 Identities=26% Similarity=0.394 Sum_probs=199.3
Q ss_pred hhcCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCCchhHHHHHHHHHhcCCCceeeEeccc--CCceEEEE
Q 003384 461 GATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVY 536 (824)
Q Consensus 461 ~~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~--~~~~~LV~ 536 (824)
..+.+|.....||+|+||.||+|.+. +..|++|++..... ....+.+|+++++.++||||+++++++ ....++|+
T Consensus 16 ~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 94 (286)
T cd06614 16 DPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVM 94 (286)
T ss_pred CccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEE
Confidence 35567888899999999999999987 68899999876543 456788999999999999999999987 45788999
Q ss_pred EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccc
Q 003384 537 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQN 616 (824)
Q Consensus 537 Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~ 616 (824)
||+++++|.+++.... ..+++..+..++.+++.||.|||. .|++|+||+|+||+++.++.++|+|||++......
T Consensus 95 e~~~~~~L~~~l~~~~--~~l~~~~~~~i~~~i~~~L~~lH~---~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~ 169 (286)
T cd06614 95 EYMDGGSLTDIITQNF--VRMNEPQIAYVCREVLQGLEYLHS---QNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKE 169 (286)
T ss_pred eccCCCcHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCChhhEEEcCCCCEEECccchhhhhccc
Confidence 9999999999996432 379999999999999999999999 89999999999999999999999999998755432
Q ss_pred cccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCCC
Q 003384 617 EISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGD 696 (824)
Q Consensus 617 ~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~ 696 (824)
... .....|+..|+|||++.+..++.++|||||||++|+|++|+.||.............. ..... ..
T Consensus 170 ~~~--------~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~--~~~~~--~~ 237 (286)
T cd06614 170 KSK--------RNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITT--KGIPP--LK 237 (286)
T ss_pred hhh--------hccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh--cCCCC--Cc
Confidence 211 1233578999999999888899999999999999999999999976554322211110 00111 11
Q ss_pred CChhhHHHHHHHHHHHhhhccCCCCChHH
Q 003384 697 WPFVQAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 697 ~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
.+...+..+.+++.+|++.+|..||++.+
T Consensus 238 ~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ 266 (286)
T cd06614 238 NPEKWSPEFKDFLNKCLVKDPEKRPSAEE 266 (286)
T ss_pred chhhCCHHHHHHHHHHhccChhhCcCHHH
Confidence 12224568999999999999999999943
No 274
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=2.5e-33 Score=301.94 Aligned_cols=248 Identities=26% Similarity=0.371 Sum_probs=187.6
Q ss_pred CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCC-CchhHHHHHHHHHhcCCCceeeEecccC--CceEEEEEe
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEY 538 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~Ey 538 (824)
.+|.....||.|+||.||+|... +..||||.+...... ....+.+|+++++.++||||+++++++. +..++||||
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEY 84 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEec
Confidence 46888899999999999999875 588999998754322 2345778999999999999999999884 468899999
Q ss_pred cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccc
Q 003384 539 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEI 618 (824)
Q Consensus 539 ~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~ 618 (824)
+.+ +|.+++... ...+++.....++.+++.||.|||+ ++|+||||||+|||++.++.+||+|||+++.......
T Consensus 85 ~~~-~L~~~~~~~--~~~~~~~~~~~~~~ql~~al~~lH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~ 158 (291)
T cd07844 85 LDT-DLKQYMDDC--GGGLSMHNVRLFLFQLLRGLAYCHQ---RRVLHRDLKPQNLLISERGELKLADFGLARAKSVPSK 158 (291)
T ss_pred CCC-CHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHh---CCeecccCCHHHEEEcCCCCEEECccccccccCCCCc
Confidence 975 899888533 2368899999999999999999999 8999999999999999999999999999875432111
Q ss_pred cCCCccccccCCCCCCcccCChhhhcc-CCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhh-h---------ccc
Q 003384 619 SSNNTTLCCRTDPKGTFAYMDPEFLAS-GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDT-G---------KLK 687 (824)
Q Consensus 619 ~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~-~---------~~~ 687 (824)
. .....++..|+|||++.+ ..++.++|||||||++|+|++|++||.........+.. . .+.
T Consensus 159 ~--------~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (291)
T cd07844 159 T--------YSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWP 230 (291)
T ss_pred c--------ccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhh
Confidence 0 122347889999999876 45889999999999999999999999654321111100 0 000
Q ss_pred c---------ccCCCC------CCC-ChhhHHHHHHHHHHHhhhccCCCCChHH
Q 003384 688 N---------LLDPLA------GDW-PFVQAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 688 ~---------~ld~~~------~~~-p~~~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
. ...... ... .......+.+++.+||+.+|.+||++.+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e 284 (291)
T cd07844 231 GVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAE 284 (291)
T ss_pred hhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHH
Confidence 0 000000 000 0111257789999999999999999843
No 275
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.1e-35 Score=341.57 Aligned_cols=243 Identities=27% Similarity=0.297 Sum_probs=195.8
Q ss_pred cCCCCccceeeecCceEEEEEEECC--eEEEEEEecCCCC---CCchhHHHHHHHHHhcCCCceeeEecccCC--ceEEE
Q 003384 463 THNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSL---QGPSEFQQEIDILSKIRHPNLVTLVGACPE--VWTLV 535 (824)
Q Consensus 463 ~~~f~~~~~LG~G~fG~Vykg~~~~--~~VAvK~l~~~~~---~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~~--~~~LV 535 (824)
..+|.+.++||+|+||.|..++.++ +.||+|++++-.+ ....-|..|.+||..-+.++|+.|+.+|.+ ++|+|
T Consensus 74 ~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~LYlV 153 (1317)
T KOG0612|consen 74 AEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYLYLV 153 (1317)
T ss_pred HHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccceEEE
Confidence 3478899999999999999998864 6799999986322 233468999999999999999999999954 68999
Q ss_pred EEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccc
Q 003384 536 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQ 615 (824)
Q Consensus 536 ~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~ 615 (824)
|||++||+|-.+|...+ +++......++.+|.-||.-||+ .|+|||||||+|||||..|++||+|||.|-.+..
T Consensus 154 MdY~pGGDlltLlSk~~---~~pE~~ArFY~aEiVlAldslH~---mgyVHRDiKPDNvLld~~GHikLADFGsClkm~~ 227 (1317)
T KOG0612|consen 154 MDYMPGGDLLTLLSKFD---RLPEDWARFYTAEIVLALDSLHS---MGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDA 227 (1317)
T ss_pred EecccCchHHHHHhhcC---CChHHHHHHHHHHHHHHHHHHHh---ccceeccCCcceeEecccCcEeeccchhHHhcCC
Confidence 99999999999995433 68888899999999999999999 8999999999999999999999999999987765
Q ss_pred ccccCCCccccccCCCCCCcccCChhhhcc-----CCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhcccccc
Q 003384 616 NEISSNNTTLCCRTDPKGTFAYMDPEFLAS-----GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLL 690 (824)
Q Consensus 616 ~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-----~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~l 690 (824)
++... ....+|||.|++||++.. +.|++.+||||+||++|||+.|..||....-+...-......+.+
T Consensus 228 dG~V~-------s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~l 300 (1317)
T KOG0612|consen 228 DGTVR-------SSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKESL 300 (1317)
T ss_pred CCcEE-------eccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhhc
Confidence 54322 145679999999999953 569999999999999999999999998766555433333333333
Q ss_pred CCCCCCCChhhHHHHHHHHHHHhhhccCCCCC
Q 003384 691 DPLAGDWPFVQAEQLANLAMRCCEMSRKSRPE 722 (824)
Q Consensus 691 d~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt 722 (824)
... -....+....+||.+.+. +|..|-.
T Consensus 301 ~FP---~~~~VSeeakdLI~~ll~-~~e~RLg 328 (1317)
T KOG0612|consen 301 SFP---DETDVSEEAKDLIEALLC-DREVRLG 328 (1317)
T ss_pred CCC---cccccCHHHHHHHHHHhc-Chhhhcc
Confidence 211 013467889999988775 5555654
No 276
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-34 Score=312.08 Aligned_cols=245 Identities=25% Similarity=0.325 Sum_probs=199.5
Q ss_pred cCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC---CCchhHHHHHHHHHhcCCCceeeEeccc--CCceEEE
Q 003384 463 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLV 535 (824)
Q Consensus 463 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~---~~~~~f~~Ei~iL~~l~HpnIv~L~g~~--~~~~~LV 535 (824)
.+.|..-++||+||||.||-...+ |+.+|.|.+.+... .......+|-.||.+++.|.||.|-.+| .+..++|
T Consensus 184 ~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClV 263 (591)
T KOG0986|consen 184 KNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLV 263 (591)
T ss_pred ccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEE
Confidence 345788889999999999977654 67899988765322 2234577899999999999999998877 5689999
Q ss_pred EEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccc
Q 003384 536 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQ 615 (824)
Q Consensus 536 ~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~ 615 (824)
|..|+||+|.-+|...++ +.|++...+.++.+|++||.+||. .+||.|||||+|||||+.|+++|+|+|||.-+..
T Consensus 264 LtlMNGGDLkfHiyn~g~-~gF~e~ra~FYAAEi~cGLehlH~---~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~ 339 (591)
T KOG0986|consen 264 LTLMNGGDLKFHIYNHGN-PGFDEQRARFYAAEIICGLEHLHR---RRIVYRDLKPENILLDDHGHVRISDLGLAVEIPE 339 (591)
T ss_pred EEeecCCceeEEeeccCC-CCCchHHHHHHHHHHHhhHHHHHh---cceeeccCChhheeeccCCCeEeeccceEEecCC
Confidence 999999999999976554 679999999999999999999999 8999999999999999999999999999998776
Q ss_pred ccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCC
Q 003384 616 NEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAG 695 (824)
Q Consensus 616 ~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~ 695 (824)
.... ...+||.+|||||++.++.|+...|+|||||+||||+.|+.||.....-.. ...+...+.....
T Consensus 340 g~~~---------~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk---~eEvdrr~~~~~~ 407 (591)
T KOG0986|consen 340 GKPI---------RGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVK---REEVDRRTLEDPE 407 (591)
T ss_pred CCcc---------ccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhh---HHHHHHHHhcchh
Confidence 5421 345799999999999999999999999999999999999999965432111 1111111112223
Q ss_pred CCChhhHHHHHHHHHHHhhhccCCCCCh
Q 003384 696 DWPFVQAEQLANLAMRCCEMSRKSRPEL 723 (824)
Q Consensus 696 ~~p~~~~~~l~~Li~~Cl~~~P~~RPt~ 723 (824)
.++..-++++..|....|..+|.+|-.-
T Consensus 408 ey~~kFS~eakslc~~LL~Kdp~~RLGc 435 (591)
T KOG0986|consen 408 EYSDKFSEEAKSLCEGLLTKDPEKRLGC 435 (591)
T ss_pred hcccccCHHHHHHHHHHHccCHHHhccC
Confidence 4556667889999999999999998654
No 277
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=1.3e-33 Score=302.54 Aligned_cols=248 Identities=26% Similarity=0.374 Sum_probs=192.2
Q ss_pred CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC--CCchhHHHHHHHHHhcCCCceeeEecccC--CceEEEEEe
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEY 538 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~--~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~Ey 538 (824)
+|...+.||.|+||.||+|.+. +..||+|++..... .....+.+|+.+++.++||||+++++++. ...++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 80 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY 80 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence 4677889999999999999875 58899999876542 22457899999999999999999999874 467899999
Q ss_pred cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccc
Q 003384 539 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEI 618 (824)
Q Consensus 539 ~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~ 618 (824)
+ +++|.+++... ..++++..+..++.+++.||.|||+ ++++|+||||+||+++.++.++|+|||++........
T Consensus 81 ~-~~~L~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~ 154 (286)
T cd07832 81 M-PSDLSEVLRDE--ERPLPEAQVKSYMRMLLKGVAYMHA---NGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEP 154 (286)
T ss_pred c-CCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCC
Confidence 9 99999988533 2569999999999999999999999 8999999999999999999999999999986644321
Q ss_pred cCCCccccccCCCCCCcccCChhhhccC-CCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhh-cc----------
Q 003384 619 SSNNTTLCCRTDPKGTFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTG-KL---------- 686 (824)
Q Consensus 619 ~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~-~~---------- 686 (824)
. ......|+..|+|||++.+. .++.++|||||||++|+|+||++||............. .+
T Consensus 155 ~-------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (286)
T cd07832 155 R-------LYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPG 227 (286)
T ss_pred C-------ccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhh
Confidence 0 01234689999999998654 46889999999999999999999986554322111000 00
Q ss_pred -------ccccCCCCC-----CCChhhHHHHHHHHHHHhhhccCCCCChHH
Q 003384 687 -------KNLLDPLAG-----DWPFVQAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 687 -------~~~ld~~~~-----~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
.....+... ......+..+.+++.+|++.+|.+||++.+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~ 278 (286)
T cd07832 228 LTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAE 278 (286)
T ss_pred ccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHH
Confidence 000000000 011123578999999999999999999943
No 278
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=2.1e-33 Score=305.60 Aligned_cols=249 Identities=23% Similarity=0.277 Sum_probs=191.5
Q ss_pred CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC---CCchhHHHHHHHHHhcCCCceeeEecccC--CceEEEEE
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYE 537 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~---~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~E 537 (824)
+|...+.||+|+||.||++... +..|++|.+..... .....+.+|+++++.++||||+++++.+. +..++|||
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (305)
T cd05609 2 DFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVME 81 (305)
T ss_pred CceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEEe
Confidence 6888899999999999999876 47899999875432 12346789999999999999999999884 45789999
Q ss_pred ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccccc
Q 003384 538 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNE 617 (824)
Q Consensus 538 y~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~ 617 (824)
|++|++|.+++.. ...+++..+..++.+++.||.|||+ ++++||||||.|||++.++.+||+|||+++......
T Consensus 82 ~~~g~~L~~~l~~---~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~ 155 (305)
T cd05609 82 YVEGGDCATLLKN---IGALPVDMARMYFAETVLALEYLHN---YGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSL 155 (305)
T ss_pred cCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCchHHEEECCCCCEEEeeCCCccccCcCc
Confidence 9999999999943 3468999999999999999999999 899999999999999999999999999987421111
Q ss_pred ccC-------CCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhcccccc
Q 003384 618 ISS-------NNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLL 690 (824)
Q Consensus 618 ~~~-------~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~l 690 (824)
... ............|+..|+|||++.+..++.++|||||||++|+|++|..||........ ..........
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~-~~~~~~~~~~ 234 (305)
T cd05609 156 TTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEEL-FGQVISDDIE 234 (305)
T ss_pred cccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHhcccC
Confidence 000 00000111234578899999999888899999999999999999999999975433211 1111001111
Q ss_pred CCCCCCCChhhHHHHHHHHHHHhhhccCCCCCh
Q 003384 691 DPLAGDWPFVQAEQLANLAMRCCEMSRKSRPEL 723 (824)
Q Consensus 691 d~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~ 723 (824)
.+. .+...+..+.+++.+||+.+|.+||+.
T Consensus 235 ~~~---~~~~~~~~~~~li~~~l~~~P~~R~~~ 264 (305)
T cd05609 235 WPE---GDEALPADAQDLISRLLRQNPLERLGT 264 (305)
T ss_pred CCC---ccccCCHHHHHHHHHHhccChhhccCc
Confidence 111 111345679999999999999999996
No 279
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-35 Score=304.22 Aligned_cols=242 Identities=26% Similarity=0.374 Sum_probs=201.6
Q ss_pred CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCCchhHHHHHHHHHhcCCCceeeEeccc--CCceEEEEEecC
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYLP 540 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~--~~~~~LV~Ey~~ 540 (824)
-|++..+||+|+||.||+++++ |+.||||.+... .+..++..|+.||++++.|++|++||.+ ...+++|||||-
T Consensus 34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~--sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCG 111 (502)
T KOG0574|consen 34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD--TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCG 111 (502)
T ss_pred HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc--chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcC
Confidence 4788889999999999999876 688999987654 4567899999999999999999999976 346889999999
Q ss_pred CCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccccC
Q 003384 541 NGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISS 620 (824)
Q Consensus 541 ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~~ 620 (824)
.|+..|++. .++.+|++..+..++...+.||.|||. ..-||||||..||||+-+|++||+|||.|..+....
T Consensus 112 AGSiSDI~R--~R~K~L~E~EIs~iL~~TLKGL~YLH~---~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTM--- 183 (502)
T KOG0574|consen 112 AGSISDIMR--ARRKPLSEQEISAVLRDTLKGLQYLHD---LKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTM--- 183 (502)
T ss_pred CCcHHHHHH--HhcCCccHHHHHHHHHHHHhHHHHHHH---HHHHHhhcccccEEEcccchhhhhhccccchhhhhH---
Confidence 999999995 445789999999999999999999999 668999999999999999999999999998665432
Q ss_pred CCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCCCCChh
Q 003384 621 NNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFV 700 (824)
Q Consensus 621 ~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~ 700 (824)
..++...||+.|||||++..-+|+.++||||||++..||..|+|||......... -+...-.|..-..|..
T Consensus 184 -----AKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAI----FMIPT~PPPTF~KPE~ 254 (502)
T KOG0574|consen 184 -----AKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAI----FMIPTKPPPTFKKPEE 254 (502)
T ss_pred -----HhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCccccccccee----EeccCCCCCCCCChHh
Confidence 2235677999999999999999999999999999999999999999654432211 0111111222234566
Q ss_pred hHHHHHHHHHHHhhhccCCCCChHH
Q 003384 701 QAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 701 ~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
.+.++.+++..||-.+|++|-+..+
T Consensus 255 WS~~F~DFi~~CLiK~PE~R~TA~~ 279 (502)
T KOG0574|consen 255 WSSEFNDFIRSCLIKKPEERKTALR 279 (502)
T ss_pred hhhHHHHHHHHHhcCCHHHHHHHHH
Confidence 6789999999999999999988744
No 280
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=1.4e-33 Score=297.08 Aligned_cols=243 Identities=24% Similarity=0.383 Sum_probs=194.1
Q ss_pred CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCC--CchhHHHHHHHHHhcCCCceeeEeccc--CCceEEEEEe
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEY 538 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~--~~~~f~~Ei~iL~~l~HpnIv~L~g~~--~~~~~LV~Ey 538 (824)
+|+..+.||+|+||.||++... +..+|||.+...... ....+.+|+.+++.++||||+++++.+ .+..++||||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY 80 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence 4778889999999999998774 578999998754322 245688999999999999999999987 4568899999
Q ss_pred cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCC-Ccceeecccccccccccc
Q 003384 539 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDAN-FVSKLSDFGISRFLSQNE 617 (824)
Q Consensus 539 ~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~-~~vKL~DFGla~~~~~~~ 617 (824)
+++++|.+++.... ...+++..+..++.+++.||.|||+ ++++||||+|.||+++.+ +.+||+|||++.......
T Consensus 81 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~---~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~ 156 (256)
T cd08220 81 APGGTLAEYIQKRC-NSLLDEDTILHFFVQILLALHHVHT---KLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKS 156 (256)
T ss_pred CCCCCHHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCc
Confidence 99999999995432 3458899999999999999999999 899999999999999854 568999999998664332
Q ss_pred ccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCCCC
Q 003384 618 ISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDW 697 (824)
Q Consensus 618 ~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~ 697 (824)
.. ....|+..|+|||.+.+..++.++||||||+++|+|++|+.||...+........ .. ......
T Consensus 157 ~~---------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~--~~----~~~~~~ 221 (256)
T cd08220 157 KA---------YTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKI--MS----GTFAPI 221 (256)
T ss_pred cc---------cccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHH--Hh----cCCCCC
Confidence 11 2245889999999999888999999999999999999999999765432221111 11 111122
Q ss_pred ChhhHHHHHHHHHHHhhhccCCCCChHHH
Q 003384 698 PFVQAEQLANLAMRCCEMSRKSRPELGKD 726 (824)
Q Consensus 698 p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~ 726 (824)
+...+..+.+++.+||..+|.+||++.+.
T Consensus 222 ~~~~~~~l~~li~~~l~~~p~~Rpt~~~l 250 (256)
T cd08220 222 SDRYSPDLRQLILSMLNLDPSKRPQLSQI 250 (256)
T ss_pred CCCcCHHHHHHHHHHccCChhhCCCHHHH
Confidence 33456689999999999999999999543
No 281
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=2e-33 Score=303.73 Aligned_cols=247 Identities=26% Similarity=0.307 Sum_probs=190.1
Q ss_pred CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCC-----CchhHHHHHHHHHhcCCCceeeEecccC--CceEEE
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ-----GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLV 535 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~-----~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV 535 (824)
+|...+.||.|+||.||+|... +..||||.+...... ....+..|+.+++.++||||+++++++. +..++|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 3677788999999999999875 578999999765432 1235678999999999999999999884 468899
Q ss_pred EEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccc
Q 003384 536 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQ 615 (824)
Q Consensus 536 ~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~ 615 (824)
|||+ +|+|.+++.... ..+++..+..++.|++.||.|||. ++|+||||+|+|||++.++.+||+|||++.....
T Consensus 81 ~e~~-~~~L~~~i~~~~--~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~ 154 (298)
T cd07841 81 FEFM-ETDLEKVIKDKS--IVLTPADIKSYMLMTLRGLEYLHS---NWILHRDLKPNNLLIASDGVLKLADFGLARSFGS 154 (298)
T ss_pred Eccc-CCCHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCChhhEEEcCCCCEEEccceeeeeccC
Confidence 9999 899999985322 369999999999999999999999 8999999999999999999999999999986643
Q ss_pred ccccCCCccccccCCCCCCcccCChhhhcc-CCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhcc--------
Q 003384 616 NEISSNNTTLCCRTDPKGTFAYMDPEFLAS-GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKL-------- 686 (824)
Q Consensus 616 ~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~-------- 686 (824)
.... .....+++.|+|||++.+ ..++.++|||||||++|+|++|.+||...............
T Consensus 155 ~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (298)
T cd07841 155 PNRK--------MTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEEN 226 (298)
T ss_pred CCcc--------ccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhh
Confidence 3211 123357889999999865 46788999999999999999999988654432211110000
Q ss_pred ----ccccCC---------CCCCCChhhHHHHHHHHHHHhhhccCCCCChHH
Q 003384 687 ----KNLLDP---------LAGDWPFVQAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 687 ----~~~ld~---------~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
...... .........+..+.+++.+||+.+|.+||++.+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e 278 (298)
T cd07841 227 WPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQ 278 (298)
T ss_pred hhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHH
Confidence 000000 000011223568899999999999999999944
No 282
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=9.7e-34 Score=305.75 Aligned_cols=235 Identities=26% Similarity=0.355 Sum_probs=192.2
Q ss_pred CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC---CCchhHHHHHHHHHhcCCCceeeEecccC--CceEEEEE
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYE 537 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~---~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~E 537 (824)
+|...+.||+|+||.||++.+. +..||+|++..... .....+.+|++++++++||||+++++++. ...++|||
T Consensus 2 ~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 81 (290)
T cd05580 2 DFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVME 81 (290)
T ss_pred ceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEEe
Confidence 6788899999999999999885 58899999865322 22456889999999999999999999874 46889999
Q ss_pred ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccccc
Q 003384 538 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNE 617 (824)
Q Consensus 538 y~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~ 617 (824)
|+++++|.+++... ..++...+..++.+++.||.|||+ +||+||||+|.|||++.++.+||+|||++.......
T Consensus 82 ~~~~~~L~~~~~~~---~~l~~~~~~~~~~qil~~l~~lH~---~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~ 155 (290)
T cd05580 82 YVPGGELFSHLRKS---GRFPEPVARFYAAQVVLALEYLHS---LDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGRT 155 (290)
T ss_pred cCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEECCCCCEEEeeCCCccccCCCC
Confidence 99999999998533 568899999999999999999999 899999999999999999999999999988654321
Q ss_pred ccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCCCC
Q 003384 618 ISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDW 697 (824)
Q Consensus 618 ~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~ 697 (824)
....|++.|+|||.+.+..++.++||||||+++|+|++|+.||............. . .....
T Consensus 156 -----------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~------~-~~~~~ 217 (290)
T cd05580 156 -----------YTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKIL------E-GKVRF 217 (290)
T ss_pred -----------CCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh------c-CCccC
Confidence 23358999999999988888999999999999999999999997654321111110 0 01122
Q ss_pred ChhhHHHHHHHHHHHhhhccCCCCCh
Q 003384 698 PFVQAEQLANLAMRCCEMSRKSRPEL 723 (824)
Q Consensus 698 p~~~~~~l~~Li~~Cl~~~P~~RPt~ 723 (824)
|...+..+.+++.+||..+|.+||+.
T Consensus 218 ~~~~~~~l~~li~~~l~~~p~~R~~~ 243 (290)
T cd05580 218 PSFFSPDAKDLIRNLLQVDLTKRLGN 243 (290)
T ss_pred CccCCHHHHHHHHHHccCCHHHccCc
Confidence 33446789999999999999999943
No 283
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=2.2e-33 Score=300.02 Aligned_cols=241 Identities=26% Similarity=0.406 Sum_probs=192.1
Q ss_pred CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCC-CCCchhHHHHHHHHHhcC---CCceeeEecccC--CceEEEE
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS-LQGPSEFQQEIDILSKIR---HPNLVTLVGACP--EVWTLVY 536 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~-~~~~~~f~~Ei~iL~~l~---HpnIv~L~g~~~--~~~~LV~ 536 (824)
.|+..+.||.|+||.||+|.+. +..||+|.+.... ......+.+|+.+++.++ |||+++++++|. ...++||
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~ 81 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM 81 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence 4677788999999999999874 5789999987542 223456889999999997 999999999884 4578999
Q ss_pred EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccc
Q 003384 537 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQN 616 (824)
Q Consensus 537 Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~ 616 (824)
||+++++|.+++.. .++++.....++.+++.||.|||+ .+|+||||+|+||+++.++.++|+|||++..+...
T Consensus 82 e~~~~~~L~~~~~~----~~l~~~~~~~i~~~i~~~l~~lh~---~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~ 154 (277)
T cd06917 82 EYAEGGSVRTLMKA----GPIAEKYISVIIREVLVALKYIHK---VGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQN 154 (277)
T ss_pred ecCCCCcHHHHHHc----cCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCcCHHHEEEcCCCCEEEccCCceeecCCC
Confidence 99999999998842 368999999999999999999999 89999999999999999999999999999876543
Q ss_pred cccCCCccccccCCCCCCcccCChhhhccC-CCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCC
Q 003384 617 EISSNNTTLCCRTDPKGTFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAG 695 (824)
Q Consensus 617 ~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~ 695 (824)
... .....|+..|+|||++.++ .++.++|||||||++|+|++|.+||............ .... ..
T Consensus 155 ~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~---~~~~---~~ 220 (277)
T cd06917 155 SSK--------RSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLI---PKSK---PP 220 (277)
T ss_pred ccc--------cccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhcc---ccCC---CC
Confidence 211 1234589999999998754 5788999999999999999999999765433221111 0111 11
Q ss_pred CCCh-hhHHHHHHHHHHHhhhccCCCCChHHH
Q 003384 696 DWPF-VQAEQLANLAMRCCEMSRKSRPELGKD 726 (824)
Q Consensus 696 ~~p~-~~~~~l~~Li~~Cl~~~P~~RPt~~~~ 726 (824)
..+. ..+..+.+++.+||+.+|.+||++.+.
T Consensus 221 ~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~i 252 (277)
T cd06917 221 RLEDNGYSKLLREFVAACLDEEPKERLSAEEL 252 (277)
T ss_pred CCCcccCCHHHHHHHHHHcCCCcccCcCHHHH
Confidence 1111 245689999999999999999998443
No 284
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.7e-35 Score=321.54 Aligned_cols=244 Identities=25% Similarity=0.369 Sum_probs=199.2
Q ss_pred CCccceeeecCceEEEEEEECCe--EEEEEEecCCCCCCchhHHHHHHHHHhcCCCceeeEeccc--CCceEEEEEecCC
Q 003384 466 FDPSLKIGEGGYGSIYKGLLRHM--QVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYLPN 541 (824)
Q Consensus 466 f~~~~~LG~G~fG~Vykg~~~~~--~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~--~~~~~LV~Ey~~g 541 (824)
|.++..||.|+||.||++..+.. ..|.|++........+.|.-||+||..++||+||+|++.| ...++|..|||.|
T Consensus 34 WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~G 113 (1187)
T KOG0579|consen 34 WEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCGG 113 (1187)
T ss_pred HHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecCC
Confidence 45566799999999999988753 3577888777766677899999999999999999999854 6788999999999
Q ss_pred CChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccccCC
Q 003384 542 GSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSN 621 (824)
Q Consensus 542 gsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~~~ 621 (824)
|-...++.. -..+|+..++.-++.+++.||.|||+ ++|||||||..|||++-+|.++|+|||.+....
T Consensus 114 GAVDaimlE--L~r~LtE~QIqvvc~q~ldALn~LHs---~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~------- 181 (1187)
T KOG0579|consen 114 GAVDAIMLE--LGRVLTEDQIQVVCYQVLDALNWLHS---QNIIHRDLKAGNILLTLDGDIRLADFGVSAKNK------- 181 (1187)
T ss_pred chHhHHHHH--hccccchHHHHHHHHHHHHHHHHHhh---cchhhhhccccceEEEecCcEeeecccccccch-------
Confidence 998887743 34679999999999999999999999 889999999999999999999999999875322
Q ss_pred CccccccCCCCCCcccCChhhhc-----cCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCCC
Q 003384 622 NTTLCCRTDPKGTFAYMDPEFLA-----SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGD 696 (824)
Q Consensus 622 ~~~~~~~~~~~GT~~Y~APE~l~-----~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~ 696 (824)
.+...+..+.|||+|||||+.. ..+|+.++||||||++|.||.-+.||....+.+...+...+- +|...-
T Consensus 182 -~t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKS----ePPTLl 256 (1187)
T KOG0579|consen 182 -STRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS----EPPTLL 256 (1187)
T ss_pred -hHHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhc----CCCccc
Confidence 1222345678999999999864 468999999999999999999999998766655444333211 222222
Q ss_pred CChhhHHHHHHHHHHHhhhccCCCCChHHH
Q 003384 697 WPFVQAEQLANLAMRCCEMSRKSRPELGKD 726 (824)
Q Consensus 697 ~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~ 726 (824)
.|...+..+.+++.+||..+|..||+..+.
T Consensus 257 qPS~Ws~~F~DfLk~cL~Knp~~Rp~aaql 286 (1187)
T KOG0579|consen 257 QPSHWSRSFSDFLKRCLVKNPRNRPPAAQL 286 (1187)
T ss_pred CcchhhhHHHHHHHHHHhcCCccCCCHHHH
Confidence 355667899999999999999999997543
No 285
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.8e-35 Score=319.50 Aligned_cols=234 Identities=29% Similarity=0.423 Sum_probs=191.4
Q ss_pred CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCCc---hhHHHHHHHHHhcCCCceeeEeccc--CCceEEEEE
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGP---SEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYE 537 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~---~~f~~Ei~iL~~l~HpnIv~L~g~~--~~~~~LV~E 537 (824)
-|...+.||.|+||-||-+.+. ...||||.+.-...+.. ..+..|+..|.+++|||+|.+-|+| ....+||||
T Consensus 27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVME 106 (948)
T KOG0577|consen 27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVME 106 (948)
T ss_pred HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHH
Confidence 4777888999999999999875 47799999876655543 4688999999999999999999998 345679999
Q ss_pred ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccccc
Q 003384 538 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNE 617 (824)
Q Consensus 538 y~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~ 617 (824)
||- ||-.|+|.- ...+|-...+..|+.+.+.||+|||+ ++.||||||..||||++.|.|||+|||.|....+.
T Consensus 107 YCl-GSAsDlleV--hkKplqEvEIAAi~~gaL~gLaYLHS---~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PA- 179 (948)
T KOG0577|consen 107 YCL-GSASDLLEV--HKKPLQEVEIAAITHGALQGLAYLHS---HNRIHRDIKAGNILLSEPGLVKLADFGSASIMAPA- 179 (948)
T ss_pred HHh-ccHHHHHHH--HhccchHHHHHHHHHHHHHHHHHHHH---hhHHhhhccccceEecCCCeeeeccccchhhcCch-
Confidence 995 577777742 34678889999999999999999999 78999999999999999999999999988765433
Q ss_pred ccCCCccccccCCCCCCcccCChhhhc---cCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHH--HHHhhhccccccCC
Q 003384 618 ISSNNTTLCCRTDPKGTFAYMDPEFLA---SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQ--YALDTGKLKNLLDP 692 (824)
Q Consensus 618 ~~~~~~~~~~~~~~~GT~~Y~APE~l~---~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~--~~~~~~~~~~~ld~ 692 (824)
.+++|||.|||||++. .|.|+-++|||||||+..||.-.+||+-..+.+. +.+..+. .|
T Consensus 180 -----------nsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQNe-----sP 243 (948)
T KOG0577|consen 180 -----------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNE-----SP 243 (948)
T ss_pred -----------hcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhcC-----CC
Confidence 4567999999999884 4789999999999999999999999976554432 2222211 11
Q ss_pred CCCCCChhhHHHHHHHHHHHhhhccCCCCCh
Q 003384 693 LAGDWPFVQAEQLANLAMRCCEMSRKSRPEL 723 (824)
Q Consensus 693 ~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~ 723 (824)
... ....+..++.|+..||+.-|.+|||.
T Consensus 244 tLq--s~eWS~~F~~Fvd~CLqKipqeRpts 272 (948)
T KOG0577|consen 244 TLQ--SNEWSDYFRNFVDSCLQKIPQERPTS 272 (948)
T ss_pred CCC--CchhHHHHHHHHHHHHhhCcccCCcH
Confidence 111 23446789999999999999999997
No 286
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=2.5e-33 Score=302.15 Aligned_cols=241 Identities=24% Similarity=0.361 Sum_probs=192.5
Q ss_pred CCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCCchhHHHHHHHHHhcCCCceeeEeccc--CCceEEEEEecCC
Q 003384 466 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYLPN 541 (824)
Q Consensus 466 f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~--~~~~~LV~Ey~~g 541 (824)
|.....||.|+||.||+|... +..|++|.+........+.+.+|+.+++.++||||+++++++ .+..++|+||+++
T Consensus 21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~ 100 (285)
T cd06648 21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEG 100 (285)
T ss_pred hhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCC
Confidence 444568999999999999865 578999998655444455688999999999999999999987 4578999999999
Q ss_pred CChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccccCC
Q 003384 542 GSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSN 621 (824)
Q Consensus 542 gsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~~~ 621 (824)
++|.+++.. .++++..+..++.+++.||.|||+ ++|+||||+|+||+++.++.++|+|||++.........
T Consensus 101 ~~L~~~~~~----~~~~~~~~~~~~~ql~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~-- 171 (285)
T cd06648 101 GALTDIVTH----TRMNEEQIATVCLAVLKALSFLHA---QGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPR-- 171 (285)
T ss_pred CCHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCChhhEEEcCCCcEEEcccccchhhccCCcc--
Confidence 999999853 458899999999999999999999 89999999999999999999999999988754332110
Q ss_pred CccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCCCCChhh
Q 003384 622 NTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQ 701 (824)
Q Consensus 622 ~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~ 701 (824)
.....|++.|+|||.+.+..++.++|||||||++|+|++|++||........... +.....+ ....+...
T Consensus 172 ------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~---~~~~~~~-~~~~~~~~ 241 (285)
T cd06648 172 ------RKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKR---IRDNLPP-KLKNLHKV 241 (285)
T ss_pred ------cccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHH---HHhcCCC-CCcccccC
Confidence 1234589999999999888899999999999999999999999965443222111 1111111 11112234
Q ss_pred HHHHHHHHHHHhhhccCCCCChHH
Q 003384 702 AEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 702 ~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
+..+.+++.+||+.+|.+||++.+
T Consensus 242 ~~~l~~li~~~l~~~p~~Rpt~~~ 265 (285)
T cd06648 242 SPRLRSFLDRMLVRDPAQRATAAE 265 (285)
T ss_pred CHHHHHHHHHHcccChhhCcCHHH
Confidence 568999999999999999999943
No 287
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=4.1e-33 Score=290.92 Aligned_cols=243 Identities=30% Similarity=0.476 Sum_probs=197.3
Q ss_pred CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCCchhHHHHHHHHHhcCCCceeeEeccc--CCceEEEEEecC
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYLP 540 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~--~~~~~LV~Ey~~ 540 (824)
.|...+.||+|+||.||+|... +..+++|++..........+.+|+.+++.++||||+++++++ ....++++||++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~ 80 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCS 80 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCC
Confidence 3677788999999999999986 678999999776544556899999999999999999999987 456889999999
Q ss_pred CCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccccC
Q 003384 541 NGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISS 620 (824)
Q Consensus 541 ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~~ 620 (824)
+++|.+++.... ..+++..+..++.+++.||.+||. ++++||||+|.||+++.++.++|+|||++........
T Consensus 81 ~~~L~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lh~---~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~-- 153 (253)
T cd05122 81 GGSLKDLLKSTN--QTLTESQIAYVCKELLKGLEYLHS---NGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA-- 153 (253)
T ss_pred CCcHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHhhc---CCEecCCCCHHHEEEccCCeEEEeecccccccccccc--
Confidence 999999985432 568999999999999999999999 8999999999999999999999999999886654321
Q ss_pred CCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCCCCChh
Q 003384 621 NNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFV 700 (824)
Q Consensus 621 ~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~ 700 (824)
.....|+..|+|||++.+..++.++||||||+++|+|++|++||.............. ........+..
T Consensus 154 -------~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~----~~~~~~~~~~~ 222 (253)
T cd05122 154 -------RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIAT----NGPPGLRNPEK 222 (253)
T ss_pred -------ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHh----cCCCCcCcccc
Confidence 1234588999999999888899999999999999999999999976533222222111 11111111222
Q ss_pred hHHHHHHHHHHHhhhccCCCCChHH
Q 003384 701 QAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 701 ~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
.+..+.+++.+||+.+|.+||++.+
T Consensus 223 ~~~~~~~~i~~~l~~~p~~R~t~~~ 247 (253)
T cd05122 223 WSDEFKDFLKKCLQKNPEKRPTAEQ 247 (253)
T ss_pred cCHHHHHHHHHHccCChhhCCCHHH
Confidence 3568999999999999999999943
No 288
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=8.9e-34 Score=316.26 Aligned_cols=188 Identities=21% Similarity=0.319 Sum_probs=158.3
Q ss_pred CCCCccceeeecCceEEEEEEECC--eEEEEEEecCCCCCCchhHHHHHHHHHhcCCCceeeEecccC--CceEEEEEec
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYL 539 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~~~--~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~Ey~ 539 (824)
.+|...+.||+|+||.||+|...+ ..||+|+.... ....|+.++++++||||+++++++. ...++||||+
T Consensus 66 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 139 (357)
T PHA03209 66 LGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHY 139 (357)
T ss_pred cCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEcc
Confidence 468899999999999999999864 68999974322 3467999999999999999999883 4678999999
Q ss_pred CCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccccccc
Q 003384 540 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEIS 619 (824)
Q Consensus 540 ~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~ 619 (824)
. |+|.+++.. ...++++..+..|+.||+.||.|||. ++||||||||+|||++.++.+||+|||+++.......
T Consensus 140 ~-~~l~~~l~~--~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~- 212 (357)
T PHA03209 140 S-SDLYTYLTK--RSRPLPIDQALIIEKQILEGLRYLHA---QRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAPA- 212 (357)
T ss_pred C-CcHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEEecCccccccccCcc-
Confidence 5 688888743 34568999999999999999999999 8999999999999999999999999999875322110
Q ss_pred CCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCC-CCCC
Q 003384 620 SNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGR-PALG 672 (824)
Q Consensus 620 ~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~-~Pf~ 672 (824)
.....||+.|+|||++.+..++.++|||||||++|||+++. ++|.
T Consensus 213 --------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~ 258 (357)
T PHA03209 213 --------FLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFE 258 (357)
T ss_pred --------cccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcccc
Confidence 12345899999999999999999999999999999999854 4444
No 289
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.1e-33 Score=324.86 Aligned_cols=191 Identities=23% Similarity=0.339 Sum_probs=161.2
Q ss_pred cCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCCchhHHHHHHHHHhcCCCceeeEeccc--CCceEEEEEe
Q 003384 463 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEY 538 (824)
Q Consensus 463 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~--~~~~~LV~Ey 538 (824)
...|.+...||+|+||.||+|.+. +..||||... ...+.+|+++|++|+|||||++++++ ....++||||
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~ 241 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW------YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPK 241 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc------ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEc
Confidence 446888999999999999999986 4779999632 23467899999999999999999987 4568899999
Q ss_pred cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccc
Q 003384 539 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEI 618 (824)
Q Consensus 539 ~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~ 618 (824)
+. ++|.+++... ...+++..++.|+.|++.||.|||. +|||||||||+||||+.++.+||+|||+++.+.....
T Consensus 242 ~~-~~L~~~l~~~--~~~l~~~~~~~i~~qi~~aL~yLH~---~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~ 315 (461)
T PHA03211 242 YR-SDLYTYLGAR--LRPLGLAQVTAVARQLLSAIDYIHG---EGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWS 315 (461)
T ss_pred cC-CCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCEEECcCCHHHEEECCCCCEEEcccCCceecccccc
Confidence 95 6888887432 3469999999999999999999999 8999999999999999999999999999986543211
Q ss_pred cCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCC
Q 003384 619 SSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPAL 671 (824)
Q Consensus 619 ~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf 671 (824)
.. ......||+.|+|||++.+..++.++|||||||+||||++|..|+
T Consensus 316 ~~------~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~l 362 (461)
T PHA03211 316 TP------FHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASL 362 (461)
T ss_pred cc------cccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCc
Confidence 10 012356999999999999999999999999999999999987654
No 290
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=3.4e-33 Score=299.26 Aligned_cols=239 Identities=28% Similarity=0.410 Sum_probs=192.2
Q ss_pred CCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC-CCchhHHHHHHHHHhcCCCceeeEecccC--CceEEEEEecC
Q 003384 466 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYLP 540 (824)
Q Consensus 466 f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~Ey~~ 540 (824)
|...+.||.|+||.||+|... +..||||.+..... .....+.+|+.+++.++||||+++++++. +..++||||++
T Consensus 6 ~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 85 (277)
T cd06641 6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLG 85 (277)
T ss_pred hhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeCC
Confidence 667788999999999999874 57899998764332 22356889999999999999999999884 46889999999
Q ss_pred CCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccccC
Q 003384 541 NGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISS 620 (824)
Q Consensus 541 ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~~ 620 (824)
+|+|.+++. ...+++..+..++.+++.||.|||+ ++++|+||+|.||+++.++.++|+|||++..+.....
T Consensus 86 ~~~l~~~i~----~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~-- 156 (277)
T cd06641 86 GGSALDLLE----PGPLDETQIATILREILKGLDYLHS---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI-- 156 (277)
T ss_pred CCcHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHcc---CCeecCCCCHHhEEECCCCCEEEeecccceecccchh--
Confidence 999999884 2468899999999999999999999 8999999999999999999999999999876543211
Q ss_pred CCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCCCCChh
Q 003384 621 NNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFV 700 (824)
Q Consensus 621 ~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~ 700 (824)
......|+..|+|||++.+..++.++|||||||++|+|++|.+||............. .......+..
T Consensus 157 ------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~------~~~~~~~~~~ 224 (277)
T cd06641 157 ------KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIP------KNNPPTLEGN 224 (277)
T ss_pred ------hhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHh------cCCCCCCCcc
Confidence 1123458899999999988889999999999999999999999997544322111110 0011122334
Q ss_pred hHHHHHHHHHHHhhhccCCCCChHH
Q 003384 701 QAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 701 ~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
.+..+.+++.+||+.+|.+||++.+
T Consensus 225 ~~~~~~~~i~~~l~~~p~~Rp~~~~ 249 (277)
T cd06641 225 YSKPLKEFVEACLNKEPSFRPTAKE 249 (277)
T ss_pred cCHHHHHHHHHHccCChhhCcCHHH
Confidence 5678999999999999999999943
No 291
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=3.7e-33 Score=300.93 Aligned_cols=250 Identities=27% Similarity=0.401 Sum_probs=188.7
Q ss_pred hcCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCC-chhHHHHHHHHHhcCCCceeeEecccC--CceEEEE
Q 003384 462 ATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG-PSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVY 536 (824)
Q Consensus 462 ~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~-~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~ 536 (824)
++.+|...+.||+|+||.||+|... +..||+|++....... ...+.+|+.+++.++|+||+++++++. +..++||
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 82 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF 82 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence 4568999999999999999999875 6889999986543322 336789999999999999999999874 4578999
Q ss_pred EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccc
Q 003384 537 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQN 616 (824)
Q Consensus 537 Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~ 616 (824)
||+. ++|.+.+.. ....+++..+..++.|++.||.|||. .+|+|+||||+|||++.++.+||+|||+++.....
T Consensus 83 e~~~-~~l~~~~~~--~~~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~ 156 (291)
T cd07870 83 EYMH-TDLAQYMIQ--HPGGLHPYNVRLFMFQLLRGLAYIHG---QHILHRDLKPQNLLISYLGELKLADFGLARAKSIP 156 (291)
T ss_pred eccc-CCHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChHHEEEcCCCcEEEeccccccccCCC
Confidence 9996 677666632 23457788889999999999999999 78999999999999999999999999998754322
Q ss_pred cccCCCccccccCCCCCCcccCChhhhccC-CCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhh-----------
Q 003384 617 EISSNNTTLCCRTDPKGTFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTG----------- 684 (824)
Q Consensus 617 ~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~----------- 684 (824)
... .....+++.|+|||++.+. .++.++|||||||++|+|+||.+||.........+...
T Consensus 157 ~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 228 (291)
T cd07870 157 SQT--------YSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDT 228 (291)
T ss_pred CCC--------CCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhh
Confidence 111 1223578999999998764 57889999999999999999999997554322111110
Q ss_pred -----ccccccCCC-----CCC----C-ChhhHHHHHHHHHHHhhhccCCCCChHH
Q 003384 685 -----KLKNLLDPL-----AGD----W-PFVQAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 685 -----~~~~~ld~~-----~~~----~-p~~~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
.+....... ... + .......+.+++.+|+..+|.+||++.+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~ 284 (291)
T cd07870 229 WPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQD 284 (291)
T ss_pred hhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHH
Confidence 000000000 000 0 0112457889999999999999999943
No 292
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.2e-34 Score=308.65 Aligned_cols=240 Identities=24% Similarity=0.368 Sum_probs=200.2
Q ss_pred CCCCccceeeecCceEEEEEE--ECCeEEEEEEecCCCCCC--chhHHHHHHHHHhcCCCceeeEecccC--CceEEEEE
Q 003384 464 HNFDPSLKIGEGGYGSIYKGL--LRHMQVAIKMLHPHSLQG--PSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYE 537 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~--~~~~~VAvK~l~~~~~~~--~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~E 537 (824)
+-|+..+.||+|.|..|-.++ +.|..||||++.+..... ..++.+|+..|+.++|||||+||.+.. ...|||+|
T Consensus 18 GLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLE 97 (864)
T KOG4717|consen 18 GLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILE 97 (864)
T ss_pred eeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEE
Confidence 458888999999999998774 578999999998765544 356889999999999999999999874 57999999
Q ss_pred ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEec-CCCcceeeccccccccccc
Q 003384 538 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLD-ANFVSKLSDFGISRFLSQN 616 (824)
Q Consensus 538 y~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld-~~~~vKL~DFGla~~~~~~ 616 (824)
+-.+|+|+|++.+.. ..+++....+++.||..|+.|+|+. .+|||||||+||.+- .-|-+||.|||++..+...
T Consensus 98 LGD~GDl~DyImKHe--~Gl~E~La~kYF~QI~~AI~YCHqL---HVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG 172 (864)
T KOG4717|consen 98 LGDGGDLFDYIMKHE--EGLNEDLAKKYFAQIVHAISYCHQL---HVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPG 172 (864)
T ss_pred ecCCchHHHHHHhhh--ccccHHHHHHHHHHHHHHHHHHhhh---hhhcccCCcceeEEeeecCceEeeeccccccCCCc
Confidence 999999999997544 4588889999999999999999994 599999999998875 5689999999999876654
Q ss_pred cccCCCccccccCCCCCCcccCChhhhccCCCC-cchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCC
Q 003384 617 EISSNNTTLCCRTDPKGTFAYMDPEFLASGELT-PKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAG 695 (824)
Q Consensus 617 ~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t-~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~ 695 (824)
.. .+...|+..|-|||++.+..|+ +++||||||||||-|++|++||.-.+..+ .+..++|-. .
T Consensus 173 ~k---------L~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSE------TLTmImDCK-Y 236 (864)
T KOG4717|consen 173 KK---------LTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSE------TLTMIMDCK-Y 236 (864)
T ss_pred ch---------hhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchh------hhhhhhccc-c
Confidence 31 1345699999999999999997 57899999999999999999996444322 233333322 2
Q ss_pred CCChhhHHHHHHHHHHHhhhccCCCCChH
Q 003384 696 DWPFVQAEQLANLAMRCCEMSRKSRPELG 724 (824)
Q Consensus 696 ~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~ 724 (824)
..|...+.+..+||..||..+|++|.+..
T Consensus 237 tvPshvS~eCrdLI~sMLvRdPkkRAslE 265 (864)
T KOG4717|consen 237 TVPSHVSKECRDLIQSMLVRDPKKRASLE 265 (864)
T ss_pred cCchhhhHHHHHHHHHHHhcCchhhccHH
Confidence 34778899999999999999999999983
No 293
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=7.2e-34 Score=300.55 Aligned_cols=238 Identities=25% Similarity=0.313 Sum_probs=195.0
Q ss_pred CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC---CCchhHHHHHHHHHhcCCCceeeEecccC--CceEEEEE
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYE 537 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~---~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~E 537 (824)
+|...+.||.|+||.||+|... +..||+|++..... ...+.+.+|+.++++++||||+++++++. +..++|||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 4778889999999999999886 68899999875432 23457889999999999999999999884 46889999
Q ss_pred ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccccc
Q 003384 538 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNE 617 (824)
Q Consensus 538 y~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~ 617 (824)
|+.|++|.+++.. ..+++...+..++.+++.||.|||. ++++|+||+|+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~~L~~~l~~---~~~l~~~~~~~~~~~i~~~l~~lh~---~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~ 154 (258)
T cd05578 81 LLLGGDLRYHLSQ---KVKFSEEQVKFWICEIVLALEYLHS---KGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT 154 (258)
T ss_pred CCCCCCHHHHHHh---cCCcCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeEEcCCCCEEEeecccccccCCCc
Confidence 9999999999843 2578999999999999999999999 889999999999999999999999999987654332
Q ss_pred ccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchH--HHHHHhhhccccccCCCCC
Q 003384 618 ISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKE--VQYALDTGKLKNLLDPLAG 695 (824)
Q Consensus 618 ~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~--~~~~~~~~~~~~~ld~~~~ 695 (824)
. .....|+..|+|||++.+..++.++||||||+++|+|++|+.||..... ....... ......
T Consensus 155 ~---------~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~------~~~~~~ 219 (258)
T cd05578 155 L---------TTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAK------QETADV 219 (258)
T ss_pred c---------ccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHH------hccccc
Confidence 1 1234588999999999888899999999999999999999999975542 1111111 110112
Q ss_pred CCChhhHHHHHHHHHHHhhhccCCCCCh
Q 003384 696 DWPFVQAEQLANLAMRCCEMSRKSRPEL 723 (824)
Q Consensus 696 ~~p~~~~~~l~~Li~~Cl~~~P~~RPt~ 723 (824)
..|...+..+.+++.+||+.+|.+||+.
T Consensus 220 ~~~~~~~~~~~~~i~~~l~~~p~~R~~~ 247 (258)
T cd05578 220 LYPATWSTEAIDAINKLLERDPQKRLGD 247 (258)
T ss_pred cCcccCcHHHHHHHHHHccCChhHcCCc
Confidence 2334456789999999999999999998
No 294
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=2.1e-33 Score=301.19 Aligned_cols=248 Identities=26% Similarity=0.344 Sum_probs=189.1
Q ss_pred CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCC--CchhHHHHHHHHHhcCCCceeeEecccC--CceEEEEEe
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEY 538 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~--~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~Ey 538 (824)
+|+..+.||.|+||.||+|... +..||||.+...... ....+.+|++++++++||||+++++++. +..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 80 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence 4778889999999999999875 578999988654322 2346889999999999999999999884 468899999
Q ss_pred cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccc
Q 003384 539 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEI 618 (824)
Q Consensus 539 ~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~ 618 (824)
+. ++|..++.... ...+++..+..++.+++.||.|||. ++++||||+|+||+++.++.+||+|||++..+.....
T Consensus 81 ~~-~~l~~~~~~~~-~~~l~~~~~~~~~~~i~~~l~~lh~---~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~ 155 (284)
T cd07860 81 LH-QDLKKFMDASP-LSGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 155 (284)
T ss_pred cc-cCHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEEeeccchhhcccCcc
Confidence 96 68888875432 3568999999999999999999999 8999999999999999999999999999875532211
Q ss_pred cCCCccccccCCCCCCcccCChhhhccCC-CCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhcc-----------
Q 003384 619 SSNNTTLCCRTDPKGTFAYMDPEFLASGE-LTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKL----------- 686 (824)
Q Consensus 619 ~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~----------- 686 (824)
. .....+++.|+|||++.+.. ++.++|||||||++|+|+||+.||...............
T Consensus 156 ~--------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (284)
T cd07860 156 T--------YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 227 (284)
T ss_pred c--------cccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhh
Confidence 1 12335788999999887644 688999999999999999999999765433221110000
Q ss_pred -----------ccccCCCCCCCChhhHHHHHHHHHHHhhhccCCCCChHH
Q 003384 687 -----------KNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 687 -----------~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
...............+..+.+++.+||+.+|.+||++.+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ 277 (284)
T cd07860 228 VTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKA 277 (284)
T ss_pred hhHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHH
Confidence 000000000001123457889999999999999999943
No 295
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=1.9e-33 Score=301.60 Aligned_cols=247 Identities=26% Similarity=0.324 Sum_probs=185.9
Q ss_pred CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCC--CchhHHHHHHHHHhcCCCceeeEecccC--CceEEEEEe
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEY 538 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~--~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~Ey 538 (824)
+|...+.||.|+||.||+|.+. +..||+|.+...... ....+.+|+.+++.++||||+++++++. ...++|+||
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY 80 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence 4777889999999999999885 678999998654222 2346788999999999999999999884 468899999
Q ss_pred cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccc
Q 003384 539 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEI 618 (824)
Q Consensus 539 ~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~ 618 (824)
+. ++|.+++... ...+++..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||++..+.....
T Consensus 81 ~~-~~l~~~~~~~--~~~~~~~~~~~~~~qi~~al~~LH~---~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~ 154 (284)
T cd07839 81 CD-QDLKKYFDSC--NGDIDPEIVKSFMFQLLKGLAFCHS---HNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVR 154 (284)
T ss_pred CC-CCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEEcCCCcEEECccchhhccCCCCC
Confidence 97 5787776432 3568999999999999999999999 8999999999999999999999999999876533211
Q ss_pred cCCCccccccCCCCCCcccCChhhhccC-CCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhh-----h--------
Q 003384 619 SSNNTTLCCRTDPKGTFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDT-----G-------- 684 (824)
Q Consensus 619 ~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~-----~-------- 684 (824)
. .....+++.|+|||++.+. .++.++|||||||++|+|+||..||............ +
T Consensus 155 ~--------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (284)
T cd07839 155 C--------YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWP 226 (284)
T ss_pred C--------cCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhH
Confidence 0 1234578999999998775 4789999999999999999988775322211111100 0
Q ss_pred ccccccCC-CCC---------CCChhhHHHHHHHHHHHhhhccCCCCChHH
Q 003384 685 KLKNLLDP-LAG---------DWPFVQAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 685 ~~~~~ld~-~~~---------~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
.+....+. ... ......+..+.+++.+||+.+|.+|||+.+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ 277 (284)
T cd07839 227 GVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEE 277 (284)
T ss_pred HhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHH
Confidence 00000000 000 001123568899999999999999999943
No 296
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=3.2e-33 Score=299.52 Aligned_cols=249 Identities=26% Similarity=0.363 Sum_probs=191.5
Q ss_pred CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCC-CchhHHHHHHHHHhcCCCceeeEecccC--CceEEEEEec
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYL 539 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~Ey~ 539 (824)
+|+..+.||.|+||.||+|... +..||||.+...... ....+.+|+.++++++||||++++++|. +..++||||+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM 80 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence 4778899999999999999985 678999998765332 2456788999999999999999999984 4689999999
Q ss_pred CCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccccccc
Q 003384 540 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEIS 619 (824)
Q Consensus 540 ~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~ 619 (824)
++ +|.+++........+++..+..++.+++.||.|||+ ++++||||||+||+++.++.+||+|||++........
T Consensus 81 ~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~- 155 (284)
T cd07836 81 DK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHE---NRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVN- 155 (284)
T ss_pred Cc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCcc-
Confidence 85 888887654444579999999999999999999999 8999999999999999999999999999975533211
Q ss_pred CCCccccccCCCCCCcccCChhhhccC-CCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhc---------ccc-
Q 003384 620 SNNTTLCCRTDPKGTFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGK---------LKN- 688 (824)
Q Consensus 620 ~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~---------~~~- 688 (824)
......+++.|++||++.+. .++.++|||||||++|+|++|++||.............. +..
T Consensus 156 -------~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (284)
T cd07836 156 -------TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGI 228 (284)
T ss_pred -------ccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHH
Confidence 01234578999999998664 578899999999999999999999975543221110000 000
Q ss_pred -ccCCCCCC-----------CChhhHHHHHHHHHHHhhhccCCCCChHH
Q 003384 689 -LLDPLAGD-----------WPFVQAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 689 -~ld~~~~~-----------~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
........ .....+..+.+++.+|++.+|.+||++.+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ 277 (284)
T cd07836 229 SQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHD 277 (284)
T ss_pred hcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHH
Confidence 00000000 11123467889999999999999999843
No 297
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=2.2e-33 Score=295.74 Aligned_cols=243 Identities=26% Similarity=0.397 Sum_probs=193.1
Q ss_pred CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC--CCchhHHHHHHHHHhcCCCceeeEecccC--CceEEEEEe
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEY 538 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~--~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~Ey 538 (824)
+|...+.||.|+||.||+|... +..||+|.+..... ...+.+.+|+.+++.++||||+++++.+. ...++||||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 80 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY 80 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence 4777889999999999999885 57899999865422 23456889999999999999999999884 457899999
Q ss_pred cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCC-cceeecccccccccccc
Q 003384 539 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANF-VSKLSDFGISRFLSQNE 617 (824)
Q Consensus 539 ~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~-~vKL~DFGla~~~~~~~ 617 (824)
+++++|.+++... ....+++..+..++.+++.||.|||+ .+++|+||||+||+++.++ .+||+|||++.......
T Consensus 81 ~~~~~L~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~ 156 (257)
T cd08225 81 CDGGDLMKRINRQ-RGVLFSEDQILSWFVQISLGLKHIHD---RKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSM 156 (257)
T ss_pred CCCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCCHHHEEEcCCCCeEEecccccchhccCCc
Confidence 9999999988543 23458999999999999999999999 7899999999999999886 56999999987654322
Q ss_pred ccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCCCC
Q 003384 618 ISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDW 697 (824)
Q Consensus 618 ~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~ 697 (824)
.. .....|++.|+|||++.+..++.++|||||||++|+|++|..||............ ....+.+ .
T Consensus 157 ~~--------~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~--~~~~~~~----~ 222 (257)
T cd08225 157 EL--------AYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKI--CQGYFAP----I 222 (257)
T ss_pred cc--------ccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHH--hcccCCC----C
Confidence 11 02235899999999998888999999999999999999999999755432222111 1111111 1
Q ss_pred ChhhHHHHHHHHHHHhhhccCCCCChHH
Q 003384 698 PFVQAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 698 p~~~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
+...+..+.+++.+||..+|.+||++.+
T Consensus 223 ~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ 250 (257)
T cd08225 223 SPNFSRDLRSLISQLFKVSPRDRPSITS 250 (257)
T ss_pred CCCCCHHHHHHHHHHhccChhhCcCHHH
Confidence 2234568999999999999999999943
No 298
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=4.1e-33 Score=298.84 Aligned_cols=247 Identities=25% Similarity=0.339 Sum_probs=188.9
Q ss_pred CCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCC--CchhHHHHHHHHHhcCCCceeeEecccC--CceEEEEEec
Q 003384 466 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYL 539 (824)
Q Consensus 466 f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~--~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~Ey~ 539 (824)
|+..+.||.|++|.||+|.+. +..||+|++...... ....+.+|+++++.++||||+++++++. +..++||||+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~ 80 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL 80 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence 566788999999999999874 688999998754322 2356889999999999999999999884 4688999999
Q ss_pred CCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccccccc
Q 003384 540 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEIS 619 (824)
Q Consensus 540 ~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~ 619 (824)
+ ++|.+++.... ...+++..+..++.+++.||.|||. ++++||||+|+|||++.++.++|+|||++..+......
T Consensus 81 ~-~~l~~~~~~~~-~~~~~~~~~~~~~~~i~~~L~~lH~---~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~ 155 (283)
T cd07835 81 D-LDLKKYMDSSP-LTGLDPPLIKSYLYQLLQGIAYCHS---HRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRT 155 (283)
T ss_pred C-cCHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCccc
Confidence 5 68998885332 2368999999999999999999999 89999999999999999999999999998755322110
Q ss_pred CCCccccccCCCCCCcccCChhhhccC-CCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhc-------------
Q 003384 620 SNNTTLCCRTDPKGTFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGK------------- 685 (824)
Q Consensus 620 ~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~------------- 685 (824)
.....+++.|+|||++.+. .++.++|||||||++|+|+||++||..............
T Consensus 156 --------~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (283)
T cd07835 156 --------YTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGV 227 (283)
T ss_pred --------cCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhh
Confidence 1233578999999988664 578899999999999999999999975543322111000
Q ss_pred ---------cccccCCCCCCCChhhHHHHHHHHHHHhhhccCCCCChHH
Q 003384 686 ---------LKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 686 ---------~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
+...............+..+.+++.+|++.+|.+||++.+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ 276 (283)
T cd07835 228 TSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKA 276 (283)
T ss_pred hhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHH
Confidence 0000000001112233467899999999999999999943
No 299
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=5.8e-33 Score=295.13 Aligned_cols=244 Identities=25% Similarity=0.368 Sum_probs=193.8
Q ss_pred CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC-----CCchhHHHHHHHHHhcCCCceeeEecccCC----ce
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL-----QGPSEFQQEIDILSKIRHPNLVTLVGACPE----VW 532 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~-----~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~~----~~ 532 (824)
.+|...+.||+|+||.||+|... +..||+|.+..... .....+.+|+.++++++||||+++++++.+ .+
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 46888999999999999999874 57899998754311 123468899999999999999999998732 47
Q ss_pred EEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccc
Q 003384 533 TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRF 612 (824)
Q Consensus 533 ~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~ 612 (824)
++||||+++++|.+++.. ...+++.....++.+++.||.|||+ .+++|+||||+||+++.++.++|+|||+++.
T Consensus 82 ~~v~e~~~~~~L~~~~~~---~~~l~~~~~~~~~~~i~~al~~LH~---~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~ 155 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKA---YGALTENVTRRYTRQILQGVSYLHS---NMIVHRDIKGANILRDSAGNVKLGDFGASKR 155 (264)
T ss_pred EEEEEeCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCEEECccccccc
Confidence 899999999999999853 3458889999999999999999999 8999999999999999999999999999986
Q ss_pred cccccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCC
Q 003384 613 LSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDP 692 (824)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~ 692 (824)
......... ......|+..|+|||++.+..++.++|||||||++|+|++|++||............. ..+
T Consensus 156 ~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~-----~~~ 225 (264)
T cd06653 156 IQTICMSGT-----GIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIA-----TQP 225 (264)
T ss_pred cccccccCc-----cccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHHHH-----cCC
Confidence 532211100 0123458999999999998889999999999999999999999997654433222111 111
Q ss_pred CCCCCChhhHHHHHHHHHHHhhhccCCCCChH
Q 003384 693 LAGDWPFVQAEQLANLAMRCCEMSRKSRPELG 724 (824)
Q Consensus 693 ~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~ 724 (824)
.....|......+.+++.+||. +|..||+..
T Consensus 226 ~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~ 256 (264)
T cd06653 226 TKPMLPDGVSDACRDFLKQIFV-EEKRRPTAE 256 (264)
T ss_pred CCCCCCcccCHHHHHHHHHHhc-CcccCccHH
Confidence 2233455667889999999999 579999984
No 300
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=5.4e-33 Score=299.74 Aligned_cols=247 Identities=26% Similarity=0.322 Sum_probs=188.7
Q ss_pred CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCC--CchhHHHHHHHHHhcC-CCceeeEecccC--Cc-----e
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKIR-HPNLVTLVGACP--EV-----W 532 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~--~~~~f~~Ei~iL~~l~-HpnIv~L~g~~~--~~-----~ 532 (824)
+|+..+.||+|+||.||+|.+. +..||||.+...... ....+.+|+.+++.+. ||||+++++++. +. .
T Consensus 2 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~ 81 (295)
T cd07837 2 AYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSL 81 (295)
T ss_pred CceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceE
Confidence 6888899999999999999875 578999987654321 2356889999999995 699999999873 22 6
Q ss_pred EEEEEecCCCChhhhhhccCC--CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecC-CCcceeecccc
Q 003384 533 TLVYEYLPNGSLEDRLSCKDN--SPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDA-NFVSKLSDFGI 609 (824)
Q Consensus 533 ~LV~Ey~~ggsL~~~L~~~~~--~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~-~~~vKL~DFGl 609 (824)
++||||+++ +|.+++..... ...+++..+..++.||+.||.|||. ++|+||||||+||+++. ++.+||+|||+
T Consensus 82 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~---~~i~H~dl~~~nil~~~~~~~~kl~dfg~ 157 (295)
T cd07837 82 YLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHK---HGVMHRDLKPQNLLVDKQKGLLKIADLGL 157 (295)
T ss_pred EEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCChHHEEEecCCCeEEEeeccc
Confidence 899999985 78888754322 3568999999999999999999999 89999999999999998 89999999999
Q ss_pred ccccccccccCCCccccccCCCCCCcccCChhhhcc-CCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhcccc
Q 003384 610 SRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLAS-GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKN 688 (824)
Q Consensus 610 a~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~ 688 (824)
+..+...... .....+++.|+|||++.+ ..++.++|||||||++|+|++|.+||...............
T Consensus 158 ~~~~~~~~~~--------~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~-- 227 (295)
T cd07837 158 GRAFSIPVKS--------YTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKL-- 227 (295)
T ss_pred ceecCCCccc--------cCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHH--
Confidence 8755322111 122347889999998865 45789999999999999999999999765543322111000
Q ss_pred ccCCCCC-----------------------CCChhhHHHHHHHHHHHhhhccCCCCChHH
Q 003384 689 LLDPLAG-----------------------DWPFVQAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 689 ~ld~~~~-----------------------~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
+..+... ......+..+.+++.+||..+|.+||++.+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~e 287 (295)
T cd07837 228 LGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKA 287 (295)
T ss_pred hCCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHH
Confidence 0000000 000124567899999999999999999843
No 301
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=2.8e-33 Score=303.44 Aligned_cols=257 Identities=17% Similarity=0.193 Sum_probs=180.4
Q ss_pred CCCCccceeeecCceEEEEEEECCe-----EEEEEEecCCCCCCch-----------hHHHHHHHHHhcCCCceeeEecc
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLLRHM-----QVAIKMLHPHSLQGPS-----------EFQQEIDILSKIRHPNLVTLVGA 527 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~~~~-----~VAvK~l~~~~~~~~~-----------~f~~Ei~iL~~l~HpnIv~L~g~ 527 (824)
+.|.+.++||+|+||.||+|.+.+. .+|+|+.......... ....+...+..+.|+||++++++
T Consensus 12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~ 91 (294)
T PHA02882 12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC 91 (294)
T ss_pred CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence 5789999999999999999987643 5677764332211100 11223344556789999999987
Q ss_pred cCC------ceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCc
Q 003384 528 CPE------VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFV 601 (824)
Q Consensus 528 ~~~------~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~ 601 (824)
+.. ..+++++++. .++.+.+.. ...+++..+..|+.|++.||.|||+ ++|+||||||+|||++.++.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~---~~iiHrDiKp~Nill~~~~~ 164 (294)
T PHA02882 92 GSFKRCRMYYRFILLEKLV-ENTKEIFKR---IKCKNKKLIKNIMKDMLTTLEYIHE---HGISHGDIKPENIMVDGNNR 164 (294)
T ss_pred eeEecCCceEEEEEEehhc-cCHHHHHHh---hccCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCc
Confidence 532 2367788774 466666632 2335778889999999999999999 89999999999999999999
Q ss_pred ceeeccccccccccccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHH---
Q 003384 602 SKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQ--- 678 (824)
Q Consensus 602 vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~--- 678 (824)
+||+|||+|+.+.......... ........||+.|+|||++.+..++.++|||||||+||||++|++||.......
T Consensus 165 ~~l~DFGla~~~~~~~~~~~~~-~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~ 243 (294)
T PHA02882 165 GYIIDYGIASHFIIHGKHIEYS-KEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLI 243 (294)
T ss_pred EEEEEcCCceeeccCCcccccc-cccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHH
Confidence 9999999998764322111100 011123469999999999999999999999999999999999999997552111
Q ss_pred HHHhhhccccccCCCCCCCChhhHHHHHHHHHHHhhhccCCCCChHHHHHHHH
Q 003384 679 YALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVL 731 (824)
Q Consensus 679 ~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~L 731 (824)
.....+....+..... .+...+..+.+++..|+..+|.+||++ +.+.+.|
T Consensus 244 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~rp~~-~~l~~~~ 293 (294)
T PHA02882 244 HAAKCDFIKRLHEGKI--KIKNANKFIYDFIECVTKLSYEEKPDY-DALIKIF 293 (294)
T ss_pred HHhHHHHHHHhhhhhh--ccCCCCHHHHHHHHHHHhCCCCCCCCH-HHHHHhh
Confidence 1111111111111100 112335789999999999999999999 5565543
No 302
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=4e-33 Score=298.61 Aligned_cols=242 Identities=26% Similarity=0.384 Sum_probs=185.3
Q ss_pred CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCC-CchhHHHHHHH-HHhcCCCceeeEeccc--CCceEEEEEe
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ-GPSEFQQEIDI-LSKIRHPNLVTLVGAC--PEVWTLVYEY 538 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~-~~~~f~~Ei~i-L~~l~HpnIv~L~g~~--~~~~~LV~Ey 538 (824)
+|+....||+|+||.||+|... +..||||.+...... ....+..|+.+ ++.++||||+++++++ ....++||||
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~ 81 (283)
T cd06617 2 DLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICMEV 81 (283)
T ss_pred CceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhhh
Confidence 6888899999999999999885 688999998754322 23356667765 5667899999999988 4468999999
Q ss_pred cCCCChhhhhhcc-CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCC-ceEeccccCCcEEecCCCcceeeccccccccccc
Q 003384 539 LPNGSLEDRLSCK-DNSPPLSWQTRIRIATELCSVLIFLHSCKPH-SIVHGDLKPANILLDANFVSKLSDFGISRFLSQN 616 (824)
Q Consensus 539 ~~ggsL~~~L~~~-~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~-giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~ 616 (824)
++ |+|.+++... .....+++..+..++.|++.||.|||+ + +++||||||+|||++.++.+||+|||++..+...
T Consensus 82 ~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~ 157 (283)
T cd06617 82 MD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHS---KLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDS 157 (283)
T ss_pred hc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhh---cCCeecCCCCHHHEEECCCCCEEEeecccccccccc
Confidence 96 6888777542 234579999999999999999999998 5 8999999999999999999999999998865322
Q ss_pred cccCCCccccccCCCCCCcccCChhhhcc----CCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCC
Q 003384 617 EISSNNTTLCCRTDPKGTFAYMDPEFLAS----GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDP 692 (824)
Q Consensus 617 ~~~~~~~~~~~~~~~~GT~~Y~APE~l~~----~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~ 692 (824)
.. .....|+..|+|||.+.+ ..++.++|+|||||++|+|++|+.||.........+.. ....
T Consensus 158 ~~---------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~-----~~~~ 223 (283)
T cd06617 158 VA---------KTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQ-----VVEE 223 (283)
T ss_pred cc---------cccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHH-----HHhc
Confidence 11 122458899999998865 45788999999999999999999999642211111111 0111
Q ss_pred CCCCCC-hhhHHHHHHHHHHHhhhccCCCCChH
Q 003384 693 LAGDWP-FVQAEQLANLAMRCCEMSRKSRPELG 724 (824)
Q Consensus 693 ~~~~~p-~~~~~~l~~Li~~Cl~~~P~~RPt~~ 724 (824)
.....+ ...+..+.+++.+||..+|.+||++.
T Consensus 224 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~ 256 (283)
T cd06617 224 PSPQLPAEKFSPEFQDFVNKCLKKNYKERPNYP 256 (283)
T ss_pred CCCCCCccccCHHHHHHHHHHccCChhhCcCHH
Confidence 111111 12456899999999999999999994
No 303
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=4.6e-33 Score=302.99 Aligned_cols=201 Identities=25% Similarity=0.359 Sum_probs=163.7
Q ss_pred CCCccceeeecCceEEEEEEEC----CeEEEEEEecCCC---CCCchhHHHHHHHHHhcCCCceeeEecccC----CceE
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR----HMQVAIKMLHPHS---LQGPSEFQQEIDILSKIRHPNLVTLVGACP----EVWT 533 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~----~~~VAvK~l~~~~---~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~----~~~~ 533 (824)
.|.....||+|+||.||+|... +..||+|.+.... ......+.+|+.+++.++||||++++++|. ...+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 3677889999999999999874 5789999988643 222356788999999999999999999884 4588
Q ss_pred EEEEecCCCChhhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecC----CCcceeecc
Q 003384 534 LVYEYLPNGSLEDRLSCK--DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDA----NFVSKLSDF 607 (824)
Q Consensus 534 LV~Ey~~ggsL~~~L~~~--~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~----~~~vKL~DF 607 (824)
+||||+++ +|.+++... .....++...+..++.|++.||.|||+ ++|+||||||+|||++. ++.+||+||
T Consensus 81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~h~dlkp~Nil~~~~~~~~~~~kl~Df 156 (316)
T cd07842 81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHS---NWVLHRDLKPANILVMGEGPERGVVKIGDL 156 (316)
T ss_pred EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHh---CCEeeCCCCHHHEEEcCCCCccceEEECCC
Confidence 99999975 666665322 122478999999999999999999999 89999999999999999 999999999
Q ss_pred ccccccccccccCCCccccccCCCCCCcccCChhhhccC-CCCcchhHHhHHHHHHHHHhCCCCCCCc
Q 003384 608 GISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLTGRPALGIT 674 (824)
Q Consensus 608 Gla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~t~ksDVwSlGvvL~ELltG~~Pf~~~ 674 (824)
|++..+....... .......+|+.|+|||++.+. .++.++|||||||++|+|++|++||...
T Consensus 157 g~~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~ 219 (316)
T cd07842 157 GLARLFNAPLKPL-----ADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGR 219 (316)
T ss_pred ccccccCCCcccc-----cccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCC
Confidence 9998664432110 111234689999999988764 5889999999999999999999999643
No 304
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=4.6e-33 Score=307.41 Aligned_cols=250 Identities=23% Similarity=0.338 Sum_probs=188.4
Q ss_pred cCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC-CCchhHHHHHHHHHhcCCCceeeEecccCC-------ce
Q 003384 463 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGACPE-------VW 532 (824)
Q Consensus 463 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~~-------~~ 532 (824)
+++|...+.||+|+||.||+|... +..||||.+..... .....+.+|+.++++++||||+++++++.. ..
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 83 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV 83 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence 457999999999999999999875 57899999864322 223467889999999999999999987632 36
Q ss_pred EEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccc
Q 003384 533 TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRF 612 (824)
Q Consensus 533 ~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~ 612 (824)
++||||+. ++|.+++. ...+++..+..++.|++.||.|||+ ++|+||||||+|||++.++.+||+|||++..
T Consensus 84 ~lv~e~~~-~~l~~~~~----~~~l~~~~~~~i~~ql~~aL~~LH~---~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~ 155 (336)
T cd07849 84 YIVQELME-TDLYKLIK----TQHLSNDHIQYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTNCDLKICDFGLARI 155 (336)
T ss_pred EEEehhcc-cCHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEECCCCCEEECcccceee
Confidence 89999996 47877773 3468999999999999999999999 8999999999999999999999999999986
Q ss_pred cccccccCCCccccccCCCCCCcccCChhhhcc-CCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhh--------
Q 003384 613 LSQNEISSNNTTLCCRTDPKGTFAYMDPEFLAS-GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDT-------- 683 (824)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~-------- 683 (824)
......... ......||+.|+|||.+.+ ..++.++|||||||++|+|++|++||...+........
T Consensus 156 ~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~ 230 (336)
T cd07849 156 ADPEHDHTG-----FLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPS 230 (336)
T ss_pred ccccccccC-----CcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCC
Confidence 543221111 1123468999999998755 46889999999999999999999999654322110000
Q ss_pred -hccccccC----------CCCCC--C---ChhhHHHHHHHHHHHhhhccCCCCChHH
Q 003384 684 -GKLKNLLD----------PLAGD--W---PFVQAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 684 -~~~~~~ld----------~~~~~--~---p~~~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
..+..+.+ +.... + ....+..+.+++.+||+.+|.+||++.+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e 288 (336)
T cd07849 231 QEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEE 288 (336)
T ss_pred HHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHH
Confidence 00000000 00000 0 0123457899999999999999999943
No 305
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=4.6e-33 Score=300.46 Aligned_cols=248 Identities=26% Similarity=0.360 Sum_probs=190.7
Q ss_pred CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCC--chhHHHHHHHHHhcCCCceeeEeccc--C--CceEEE
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG--PSEFQQEIDILSKIRHPNLVTLVGAC--P--EVWTLV 535 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~--~~~f~~Ei~iL~~l~HpnIv~L~g~~--~--~~~~LV 535 (824)
.+|...+.||.|+||.||+|.+. +..||+|.+....... ...+.+|+.++.+++||||+++++++ . ...++|
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv 84 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV 84 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence 36788889999999999999986 5789999987543221 23567899999999999999999987 3 568999
Q ss_pred EEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccc
Q 003384 536 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQ 615 (824)
Q Consensus 536 ~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~ 615 (824)
|||+. ++|.+++.... ..+++..+..++.|++.||.|||+ ++++||||||+|||++.++.+||+|||++..+..
T Consensus 85 ~e~~~-~~L~~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~---~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~ 158 (293)
T cd07843 85 MEYVE-HDLKSLMETMK--QPFLQSEVKCLMLQLLSGVAHLHD---NWILHRDLKTSNLLLNNRGILKICDFGLAREYGS 158 (293)
T ss_pred ehhcC-cCHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCCHHHEEECCCCcEEEeecCceeeccC
Confidence 99997 48998885432 368999999999999999999999 8999999999999999999999999999986654
Q ss_pred ccccCCCccccccCCCCCCcccCChhhhccC-CCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhh----------
Q 003384 616 NEISSNNTTLCCRTDPKGTFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTG---------- 684 (824)
Q Consensus 616 ~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~---------- 684 (824)
.... .....+++.|+|||++.+. .++.++|||||||++|+|++|.+||.............
T Consensus 159 ~~~~--------~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~ 230 (293)
T cd07843 159 PLKP--------YTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKI 230 (293)
T ss_pred Cccc--------cccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHH
Confidence 3211 1233578999999998764 46889999999999999999999997543322110000
Q ss_pred -------------ccccc-cCCCCCCCChh-hHHHHHHHHHHHhhhccCCCCChHH
Q 003384 685 -------------KLKNL-LDPLAGDWPFV-QAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 685 -------------~~~~~-ld~~~~~~p~~-~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
..... .......++.. .+..+.+++.+||+.+|.+||++.+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~e 286 (293)
T cd07843 231 WPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAED 286 (293)
T ss_pred HHHhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHH
Confidence 00000 00011122222 4677899999999999999999843
No 306
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=3e-33 Score=295.12 Aligned_cols=245 Identities=27% Similarity=0.355 Sum_probs=190.9
Q ss_pred eeecCceEEEEEEEC--CeEEEEEEecCCCC---CCchhHHHHHHHHHhcCCCceeeEecccC--CceEEEEEecCCCCh
Q 003384 472 IGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYLPNGSL 544 (824)
Q Consensus 472 LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~---~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~Ey~~ggsL 544 (824)
||.|+||.||++.+. +..|++|++..... .....+.+|++++++++||||+++++.+. ...++||||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 689999999999986 68899999876543 23456889999999999999999998874 468899999999999
Q ss_pred hhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccccCCCcc
Q 003384 545 EDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTT 624 (824)
Q Consensus 545 ~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~~~~~~ 624 (824)
.+++... ..+++..+..++.|++.||.|||. .+++||||+|+||+++.++.+||+|||++..............
T Consensus 81 ~~~l~~~---~~~~~~~~~~i~~qi~~~L~~lH~---~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 154 (265)
T cd05579 81 ASLLENV---GSLDEDVARIYIAEIVLALEYLHS---NGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDD 154 (265)
T ss_pred HHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH---cCeecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccc
Confidence 9998533 368999999999999999999999 8999999999999999999999999999875443211100000
Q ss_pred ccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCCCCChhh--H
Q 003384 625 LCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQ--A 702 (824)
Q Consensus 625 ~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~--~ 702 (824)
........++..|+|||.+....++.++||||||+++|+|++|.+||.............. . ...++... +
T Consensus 155 ~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~--~-----~~~~~~~~~~~ 227 (265)
T cd05579 155 EKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILN--G-----KIEWPEDVEVS 227 (265)
T ss_pred cccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc--C-----CcCCCccccCC
Confidence 0011234578899999999888899999999999999999999999975543222111100 0 11122222 6
Q ss_pred HHHHHHHHHHhhhccCCCCChHHHHHHH
Q 003384 703 EQLANLAMRCCEMSRKSRPELGKDVWRV 730 (824)
Q Consensus 703 ~~l~~Li~~Cl~~~P~~RPt~~~~v~~~ 730 (824)
..+.+++.+||+.+|.+||++ ..+.+.
T Consensus 228 ~~~~~~i~~~l~~~p~~Rpt~-~~~~~~ 254 (265)
T cd05579 228 DEAIDLISKLLVPDPEKRLGA-KSIEEI 254 (265)
T ss_pred HHHHHHHHHHhcCCHhhcCCC-ccHHHH
Confidence 789999999999999999998 344333
No 307
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=4.6e-33 Score=294.23 Aligned_cols=243 Identities=24% Similarity=0.365 Sum_probs=197.2
Q ss_pred CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC-CCchhHHHHHHHHHhcCCCceeeEecccC--CceEEEEEec
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYL 539 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~Ey~ 539 (824)
+|...+.||.|+||.||+|... +..|+||++..... .....+.+|+.++..++||||+++++++. ...++||||+
T Consensus 2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (264)
T cd06623 2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYM 81 (264)
T ss_pred cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEec
Confidence 6788899999999999999886 58899999876543 23467999999999999999999999884 4688999999
Q ss_pred CCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccccccc
Q 003384 540 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEIS 619 (824)
Q Consensus 540 ~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~ 619 (824)
++++|.+++... .+++...+..++.+++.||.|||.. .+++||||+|+||+++.++.++|+|||++.........
T Consensus 82 ~~~~L~~~l~~~---~~l~~~~~~~~~~~l~~~l~~lh~~--~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~ 156 (264)
T cd06623 82 DGGSLADLLKKV---GKIPEPVLAYIARQILKGLDYLHTK--RHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQ 156 (264)
T ss_pred CCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHhcc--CCCccCCCCHHHEEECCCCCEEEccCccceecccCCCc
Confidence 999999999532 6689999999999999999999973 47999999999999999999999999998866433211
Q ss_pred CCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCch--HHHHHHhhhccccccCCCCCCC
Q 003384 620 SNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITK--EVQYALDTGKLKNLLDPLAGDW 697 (824)
Q Consensus 620 ~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~--~~~~~~~~~~~~~~ld~~~~~~ 697 (824)
. ....|+..|+|||.+.+..++.++||||||+++|+|+||++||.... ........ +........
T Consensus 157 ~--------~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~-----~~~~~~~~~ 223 (264)
T cd06623 157 C--------NTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQA-----ICDGPPPSL 223 (264)
T ss_pred c--------cceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHH-----HhcCCCCCC
Confidence 1 23357899999999998899999999999999999999999996653 11111111 111111222
Q ss_pred Chh-hHHHHHHHHHHHhhhccCCCCChHH
Q 003384 698 PFV-QAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 698 p~~-~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
+.. .+..+.+++.+||..+|.+||++.+
T Consensus 224 ~~~~~~~~l~~li~~~l~~~p~~R~~~~~ 252 (264)
T cd06623 224 PAEEFSPEFRDFISACLQKDPKKRPSAAE 252 (264)
T ss_pred CcccCCHHHHHHHHHHccCChhhCCCHHH
Confidence 333 5678999999999999999999943
No 308
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=7.7e-33 Score=290.04 Aligned_cols=246 Identities=27% Similarity=0.412 Sum_probs=198.2
Q ss_pred CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC--CCchhHHHHHHHHHhcCCCceeeEecccC----CceEEEE
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVGACP----EVWTLVY 536 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~--~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~----~~~~LV~ 536 (824)
+|...+.||+|+||.||+|... +..|++|++..... .....+.+|+.++++++||||+++++.+. ...++||
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 3667788999999999999987 68899999876543 23467899999999999999999999874 4578999
Q ss_pred EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccc
Q 003384 537 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQN 616 (824)
Q Consensus 537 Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~ 616 (824)
||+++++|.+++... ..+++..+..++.+++.||.|||+ .+++|+||+|+||+++.++.+||+|||.+......
T Consensus 81 e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~l~~~l~~lh~---~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~ 154 (260)
T cd06606 81 EYVSGGSLSSLLKKF---GKLPEPVIRKYTRQILEGLAYLHS---NGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDI 154 (260)
T ss_pred EecCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEcCCCCEEEcccccEEecccc
Confidence 999999999998533 379999999999999999999999 89999999999999999999999999999876554
Q ss_pred cccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCCC
Q 003384 617 EISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGD 696 (824)
Q Consensus 617 ~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~ 696 (824)
... .......++..|+|||.+.+..++.++||||||+++|+|++|..||............ ... ......
T Consensus 155 ~~~------~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~--~~~--~~~~~~ 224 (260)
T cd06606 155 ETG------EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYK--IGS--SGEPPE 224 (260)
T ss_pred ccc------ccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHh--ccc--cCCCcC
Confidence 321 0012345899999999998888999999999999999999999999765421111111 000 011122
Q ss_pred CChhhHHHHHHHHHHHhhhccCCCCChHHH
Q 003384 697 WPFVQAEQLANLAMRCCEMSRKSRPELGKD 726 (824)
Q Consensus 697 ~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~ 726 (824)
.+...+..+.+++.+|++.+|.+||++.+.
T Consensus 225 ~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~l 254 (260)
T cd06606 225 IPEHLSEEAKDFLRKCLRRDPKKRPTADEL 254 (260)
T ss_pred CCcccCHHHHHHHHHhCcCChhhCCCHHHH
Confidence 344457799999999999999999999443
No 309
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=2.8e-33 Score=299.96 Aligned_cols=236 Identities=25% Similarity=0.339 Sum_probs=187.4
Q ss_pred eeecCceEEEEEEEC--CeEEEEEEecCCCC---CCchhHHHHHHHHHhcCCCceeeEecccC--CceEEEEEecCCCCh
Q 003384 472 IGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYLPNGSL 544 (824)
Q Consensus 472 LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~---~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~Ey~~ggsL 544 (824)
||+|+||+||++... +..||+|.+..... .....+..|+.+|+.++||||+++++++. +..++||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 699999999999765 57899999865322 12345678999999999999999999873 468999999999999
Q ss_pred hhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccccCCCcc
Q 003384 545 EDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTT 624 (824)
Q Consensus 545 ~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~~~~~~ 624 (824)
.+++..... ..+++..+..++.+++.||.|||. .+++||||+|+|||++.++.+||+|||++........
T Consensus 81 ~~~l~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~---~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~------ 150 (277)
T cd05577 81 KYHIYNVGE-PGFPEARAIFYAAQIICGLEHLHQ---RRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKK------ 150 (277)
T ss_pred HHHHHHcCc-CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEEccCcchhhhccCCc------
Confidence 999864332 468999999999999999999999 8999999999999999999999999999876543211
Q ss_pred ccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHH--HHHHhhhccccccCCCCCCCChhhH
Q 003384 625 LCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEV--QYALDTGKLKNLLDPLAGDWPFVQA 702 (824)
Q Consensus 625 ~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~--~~~~~~~~~~~~ld~~~~~~p~~~~ 702 (824)
.....|+..|+|||++.+..++.++|||||||++|+|++|+.||...... ...+..... ......+...+
T Consensus 151 ---~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 222 (277)
T cd05577 151 ---IKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTL-----EMAVEYPDKFS 222 (277)
T ss_pred ---cccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhccc-----cccccCCccCC
Confidence 12335788999999998888999999999999999999999999654321 111111111 11122333456
Q ss_pred HHHHHHHHHHhhhccCCCCChHH
Q 003384 703 EQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 703 ~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
..+.+++.+||+.+|.+||++.+
T Consensus 223 ~~~~~li~~~l~~~p~~R~~~~~ 245 (277)
T cd05577 223 PEAKDLCEALLQKDPEKRLGCRG 245 (277)
T ss_pred HHHHHHHHHHccCChhHccCCCc
Confidence 78999999999999999996643
No 310
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=2.3e-33 Score=297.36 Aligned_cols=232 Identities=25% Similarity=0.338 Sum_probs=189.2
Q ss_pred eeecCceEEEEEEEC--CeEEEEEEecCCCCC---CchhHHHHHHHHHhcCCCceeeEecccC--CceEEEEEecCCCCh
Q 003384 472 IGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ---GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYLPNGSL 544 (824)
Q Consensus 472 LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~---~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~Ey~~ggsL 544 (824)
||.|+||.||+|... +..||+|++...... ....+.+|+.+++.++||||+++++.+. ...++||||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 699999999999987 688999998754322 2356899999999999999999999874 468899999999999
Q ss_pred hhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccccCCCcc
Q 003384 545 EDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTT 624 (824)
Q Consensus 545 ~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~~~~~~ 624 (824)
.+++.. ...++...+..++.+++.||.|||+ ++++|+||+|+||+++.++.+||+|||++........
T Consensus 81 ~~~l~~---~~~l~~~~~~~~~~~i~~~l~~lH~---~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~~------ 148 (262)
T cd05572 81 WTILRD---RGLFDEYTARFYIACVVLAFEYLHN---RGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQK------ 148 (262)
T ss_pred HHHHhh---cCCCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCHHHEEEcCCCCEEEeeCCcccccCcccc------
Confidence 999953 3458899999999999999999999 8999999999999999999999999999986643310
Q ss_pred ccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCch--HHHHHHhhhccccccC-CCCCCCChhh
Q 003384 625 LCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITK--EVQYALDTGKLKNLLD-PLAGDWPFVQ 701 (824)
Q Consensus 625 ~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~--~~~~~~~~~~~~~~ld-~~~~~~p~~~ 701 (824)
.....|++.|++||.+.+..++.++|+||||+++|+|++|.+||.... ....... ... ......|...
T Consensus 149 ---~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~------~~~~~~~~~~~~~~ 219 (262)
T cd05572 149 ---TWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYND------ILKGNGKLEFPNYI 219 (262)
T ss_pred ---cccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHH------HhccCCCCCCCccc
Confidence 022357899999999988889999999999999999999999997654 2111111 110 1122334444
Q ss_pred HHHHHHHHHHHhhhccCCCCChH
Q 003384 702 AEQLANLAMRCCEMSRKSRPELG 724 (824)
Q Consensus 702 ~~~l~~Li~~Cl~~~P~~RPt~~ 724 (824)
+..+.+++.+||+.+|.+||++.
T Consensus 220 ~~~~~~~i~~~l~~~p~~R~~~~ 242 (262)
T cd05572 220 DKAAKDLIKQLLRRNPEERLGNL 242 (262)
T ss_pred CHHHHHHHHHHccCChhhCcCCc
Confidence 67899999999999999999953
No 311
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=2.7e-33 Score=296.77 Aligned_cols=242 Identities=27% Similarity=0.383 Sum_probs=193.0
Q ss_pred CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC-CCchhHHHHHHHHHhcCCCceeeEeccc--CCceEEEEEec
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYL 539 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l~HpnIv~L~g~~--~~~~~LV~Ey~ 539 (824)
+|+..+.||.|+||.||++... +..||+|.+..... .....+.+|+++++.++||||+++++.+ ....++|+||+
T Consensus 2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (265)
T cd06605 2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYM 81 (265)
T ss_pred cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEec
Confidence 5677788999999999999886 57899999876532 2335688999999999999999999987 34688999999
Q ss_pred CCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccccccc
Q 003384 540 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEIS 619 (824)
Q Consensus 540 ~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~ 619 (824)
++++|.+++.... .+++...+..++.+++.||.|||.. .+++|+||||+||+++.++.+||+|||++........
T Consensus 82 ~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~--~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~- 156 (265)
T cd06605 82 DGGSLDKILKEVQ--GRIPERILGKIAVAVLKGLTYLHEK--HKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLA- 156 (265)
T ss_pred CCCcHHHHHHHcc--CCCCHHHHHHHHHHHHHHHHHHcCC--CCeecCCCCHHHEEECCCCCEEEeecccchhhHHHHh-
Confidence 9999999985332 5788999999999999999999982 5799999999999999999999999999876543211
Q ss_pred CCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCch----HHHHHHhhhccccccCCCCC
Q 003384 620 SNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITK----EVQYALDTGKLKNLLDPLAG 695 (824)
Q Consensus 620 ~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~----~~~~~~~~~~~~~~ld~~~~ 695 (824)
....|+..|+|||++.+..++.++|||||||++|+|++|+.||.... ....... ........
T Consensus 157 ---------~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~ 222 (265)
T cd06605 157 ---------KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQ-----YIVNEPPP 222 (265)
T ss_pred ---------hcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHH-----HHhcCCCC
Confidence 11458899999999998899999999999999999999999996542 1111111 11111111
Q ss_pred CCChh-hHHHHHHHHHHHhhhccCCCCChHH
Q 003384 696 DWPFV-QAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 696 ~~p~~-~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
..+.. .+..+.+++.+||..+|.+||++.+
T Consensus 223 ~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ 253 (265)
T cd06605 223 RLPSGKFSPDFQDFVNLCLIKDPRERPSYKE 253 (265)
T ss_pred CCChhhcCHHHHHHHHHHcCCCchhCcCHHH
Confidence 11222 5668999999999999999999843
No 312
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-34 Score=298.87 Aligned_cols=238 Identities=25% Similarity=0.310 Sum_probs=198.1
Q ss_pred CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCCch---hHHHHHHHHHhcCCCceeeEeccc--CCceEEEE
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPS---EFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVY 536 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~---~f~~Ei~iL~~l~HpnIv~L~g~~--~~~~~LV~ 536 (824)
++|+..++||+|.||+|-.++-+ ++.+|||++++......+ .-..|-.+|+..+||.+..|-.+| .+..|.||
T Consensus 168 ~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFVM 247 (516)
T KOG0690|consen 168 EDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFVM 247 (516)
T ss_pred chhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEEE
Confidence 47889999999999999988654 578999999876443333 456789999999999999998887 46799999
Q ss_pred EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccc
Q 003384 537 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQN 616 (824)
Q Consensus 537 Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~ 616 (824)
||..||.|..+|. ....++......+..+|..||.|||+ ++||.||||.+|+|||.+|++||+|||||+--...
T Consensus 248 eyanGGeLf~HLs---rer~FsE~RtRFYGaEIvsAL~YLHs---~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~~ 321 (516)
T KOG0690|consen 248 EYANGGELFFHLS---RERVFSEDRTRFYGAEIVSALGYLHS---RNIVYRDLKLENLLLDKDGHIKITDFGLCKEEIKY 321 (516)
T ss_pred EEccCceEeeehh---hhhcccchhhhhhhHHHHHHhhhhhh---CCeeeeechhhhheeccCCceEeeecccchhcccc
Confidence 9999999999984 34568888888899999999999999 89999999999999999999999999999843222
Q ss_pred cccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCCC
Q 003384 617 EISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGD 696 (824)
Q Consensus 617 ~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~ 696 (824)
+ .. .....|||.|+|||++....|+..+|+|.+|||+|||++|+.||...++ +++.+++-.....
T Consensus 322 g--~t------~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh-------~kLFeLIl~ed~k 386 (516)
T KOG0690|consen 322 G--DT------TKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDH-------EKLFELILMEDLK 386 (516)
T ss_pred c--ce------eccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccch-------hHHHHHHHhhhcc
Confidence 1 11 1446699999999999999999999999999999999999999965433 3333333333445
Q ss_pred CChhhHHHHHHHHHHHhhhccCCCCC
Q 003384 697 WPFVQAEQLANLAMRCCEMSRKSRPE 722 (824)
Q Consensus 697 ~p~~~~~~l~~Li~~Cl~~~P~~RPt 722 (824)
+|...+++...|+.-.|..+|.+|-.
T Consensus 387 FPr~ls~eAktLLsGLL~kdP~kRLG 412 (516)
T KOG0690|consen 387 FPRTLSPEAKTLLSGLLKKDPKKRLG 412 (516)
T ss_pred CCccCCHHHHHHHHHHhhcChHhhcC
Confidence 67788889999999999999999953
No 313
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=9.9e-33 Score=300.53 Aligned_cols=240 Identities=28% Similarity=0.377 Sum_probs=188.6
Q ss_pred CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCC---chhHHHHHHHHHhcCCCceeeEecccC--CceEEEE
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG---PSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVY 536 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~---~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~ 536 (824)
..|...+.||+|+||.||+|... +..||+|.+....... ...+.+|+.+++.++||||++++++|. +..++||
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~ 94 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM 94 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence 45888899999999999999874 6889999986543322 245889999999999999999999884 4688999
Q ss_pred EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccc
Q 003384 537 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQN 616 (824)
Q Consensus 537 Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~ 616 (824)
||++ |+|.+.+... ..++++..+..++.|++.||.|||. .+|+||||+|+||+++.++.+||+|||++......
T Consensus 95 e~~~-g~l~~~~~~~--~~~l~~~~~~~~~~ql~~~L~~LH~---~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~ 168 (307)
T cd06607 95 EYCL-GSASDILEVH--KKPLQEVEIAAICHGALQGLAYLHS---HERIHRDIKAGNILLTEPGTVKLADFGSASLVSPA 168 (307)
T ss_pred HhhC-CCHHHHHHHc--ccCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCcccEEECCCCCEEEeecCcceecCCC
Confidence 9997 5777766422 3468999999999999999999999 88999999999999999999999999998754322
Q ss_pred cccCCCccccccCCCCCCcccCChhhhc---cCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCC
Q 003384 617 EISSNNTTLCCRTDPKGTFAYMDPEFLA---SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPL 693 (824)
Q Consensus 617 ~~~~~~~~~~~~~~~~GT~~Y~APE~l~---~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~ 693 (824)
....|++.|+|||++. ...++.++|||||||++|+|+||++||.............. .. .+.
T Consensus 169 ------------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~-~~--~~~ 233 (307)
T cd06607 169 ------------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQ-ND--SPT 233 (307)
T ss_pred ------------CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhc-CC--CCC
Confidence 1235788999999874 35688899999999999999999999976543332211110 00 010
Q ss_pred CCCCChhhHHHHHHHHHHHhhhccCCCCChHHH
Q 003384 694 AGDWPFVQAEQLANLAMRCCEMSRKSRPELGKD 726 (824)
Q Consensus 694 ~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~ 726 (824)
..+...+..+.+++.+||+.+|.+||++.+.
T Consensus 234 --~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i 264 (307)
T cd06607 234 --LSSNDWSDYFRNFVDSCLQKIPQDRPSSEEL 264 (307)
T ss_pred --CCchhhCHHHHHHHHHHhcCChhhCcCHHHH
Confidence 0122345689999999999999999999443
No 314
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=4.6e-33 Score=299.46 Aligned_cols=248 Identities=25% Similarity=0.306 Sum_probs=186.4
Q ss_pred CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCC-CchhHHHHHHHHHhcC-CCceeeEeccc--CCceEEEEEe
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIR-HPNLVTLVGAC--PEVWTLVYEY 538 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~-HpnIv~L~g~~--~~~~~LV~Ey 538 (824)
+|.....||+|+||.||++... +..||+|.+...... ....+.+|+.++.++. ||||++++|++ ....+++|||
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~ 84 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMEL 84 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEec
Confidence 3555678999999999999885 578999998754322 2346889999999996 99999999987 3467899999
Q ss_pred cCCCChhhhhhc--cCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccc
Q 003384 539 LPNGSLEDRLSC--KDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQN 616 (824)
Q Consensus 539 ~~ggsL~~~L~~--~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~ 616 (824)
+. ++|.++... ......+++.....++.+++.||.|||+. .+|+||||||+|||++.++.+||+|||++..+...
T Consensus 85 ~~-~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~--~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 161 (288)
T cd06616 85 MD-ISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEE--LKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDS 161 (288)
T ss_pred cc-CCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhc--CCeeccCCCHHHEEEccCCcEEEeecchhHHhccC
Confidence 86 455554321 12235689999999999999999999972 37999999999999999999999999999765432
Q ss_pred cccCCCccccccCCCCCCcccCChhhhccC---CCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCC
Q 003384 617 EISSNNTTLCCRTDPKGTFAYMDPEFLASG---ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPL 693 (824)
Q Consensus 617 ~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~---~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~ 693 (824)
... ....|++.|+|||++.+. .++.++|||||||++|+|++|++||.........+... ........
T Consensus 162 ~~~---------~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~-~~~~~~~~ 231 (288)
T cd06616 162 IAK---------TRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQV-VKGDPPIL 231 (288)
T ss_pred Ccc---------ccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhh-cCCCCCcC
Confidence 111 223589999999998776 68999999999999999999999996543221111111 00000011
Q ss_pred CCCCChhhHHHHHHHHHHHhhhccCCCCChHH
Q 003384 694 AGDWPFVQAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 694 ~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
....+...+..+.+|+.+||+.+|.+||++.+
T Consensus 232 ~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ 263 (288)
T cd06616 232 SNSEEREFSPSFVNFINLCLIKDESKRPKYKE 263 (288)
T ss_pred CCcCCCccCHHHHHHHHHHccCChhhCcCHHH
Confidence 11112335678999999999999999999943
No 315
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=1.4e-32 Score=288.59 Aligned_cols=241 Identities=28% Similarity=0.435 Sum_probs=196.6
Q ss_pred CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC--CCchhHHHHHHHHHhcCCCceeeEecccC--CceEEEEEe
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEY 538 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~--~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~Ey 538 (824)
+|...+.||+|+||.||+|... +..|++|.+..... .....+.+|++++++++|||++++++++. ...++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY 80 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence 4677889999999999999875 47899999976644 23457899999999999999999999874 467899999
Q ss_pred cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccc
Q 003384 539 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEI 618 (824)
Q Consensus 539 ~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~ 618 (824)
+++++|.+++.. ..++++..+..++.+++.||.|||. +||+||||+|+||+++.++.+||+|||++........
T Consensus 81 ~~~~~L~~~~~~---~~~l~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~ 154 (254)
T cd06627 81 AENGSLRQIIKK---FGPFPESLVAVYVYQVLQGLAYLHE---QGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSK 154 (254)
T ss_pred CCCCcHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCHHHEEECCCCCEEEeccccceecCCCcc
Confidence 999999999843 3578999999999999999999999 8999999999999999999999999999987654321
Q ss_pred cCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCCCCC
Q 003384 619 SSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWP 698 (824)
Q Consensus 619 ~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p 698 (824)
. .....|+..|+|||.+.+..++.++||||||+++|+|++|++||............. .......+
T Consensus 155 ~--------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~------~~~~~~~~ 220 (254)
T cd06627 155 D--------DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIV------QDDHPPLP 220 (254)
T ss_pred c--------ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHh------ccCCCCCC
Confidence 1 123458999999999988888999999999999999999999997554322221111 01112233
Q ss_pred hhhHHHHHHHHHHHhhhccCCCCChHH
Q 003384 699 FVQAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 699 ~~~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
...+..+.+++.+||..+|++||++.+
T Consensus 221 ~~~~~~~~~~i~~~l~~~p~~R~~~~~ 247 (254)
T cd06627 221 EGISPELKDFLMQCFQKDPNLRPTAKQ 247 (254)
T ss_pred CCCCHHHHHHHHHHHhCChhhCcCHHH
Confidence 445678999999999999999999843
No 316
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=9.9e-33 Score=300.86 Aligned_cols=252 Identities=22% Similarity=0.262 Sum_probs=189.5
Q ss_pred ccceeeecCceEEEEEEECCeEEEEEEecCC--CCCCchhHHHHHHHHHhcCCCceeeEecccC--CceEEEEEecCCCC
Q 003384 468 PSLKIGEGGYGSIYKGLLRHMQVAIKMLHPH--SLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYLPNGS 543 (824)
Q Consensus 468 ~~~~LG~G~fG~Vykg~~~~~~VAvK~l~~~--~~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~Ey~~ggs 543 (824)
+.+.+|.|+++.||++...+..||||++... .......+.+|+.+++.++||||+++++++. +..+++|||+++|+
T Consensus 6 i~~~~~~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~ 85 (314)
T cd08216 6 IGKCFEDLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGS 85 (314)
T ss_pred hhHhhcCCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCC
Confidence 3445667777888888888899999998764 2233457999999999999999999999884 46889999999999
Q ss_pred hhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccccCCCc
Q 003384 544 LEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNT 623 (824)
Q Consensus 544 L~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~~~~~ 623 (824)
|.+++.... ...++...+..++.+++.||.|||. ++|+||||||+|||++.++.+||+|||.+..+........ .
T Consensus 86 l~~~l~~~~-~~~~~~~~~~~~~~~l~~~L~~LH~---~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~-~ 160 (314)
T cd08216 86 CEDLLKTHF-PEGLPELAIAFILKDVLNALDYIHS---KGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQR-V 160 (314)
T ss_pred HHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCcceEEEecCCceEEecCccceeecccccccc-c
Confidence 999986432 2358889999999999999999999 8999999999999999999999999999876543221110 1
Q ss_pred cccccCCCCCCcccCChhhhcc--CCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhh--hccccccC--------
Q 003384 624 TLCCRTDPKGTFAYMDPEFLAS--GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDT--GKLKNLLD-------- 691 (824)
Q Consensus 624 ~~~~~~~~~GT~~Y~APE~l~~--~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~--~~~~~~ld-------- 691 (824)
.........++..|+|||++.. ..++.++|||||||++|+|++|++||............ +.....++
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (314)
T cd08216 161 VHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYE 240 (314)
T ss_pred cccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhc
Confidence 1111233457889999999876 36889999999999999999999999755433222211 11111110
Q ss_pred ------------C-----CCCCCChhhHHHHHHHHHHHhhhccCCCCChH
Q 003384 692 ------------P-----LAGDWPFVQAEQLANLAMRCCEMSRKSRPELG 724 (824)
Q Consensus 692 ------------~-----~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~ 724 (824)
+ .....+......+.+|+.+||+.+|.+||++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~ 290 (314)
T cd08216 241 DSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSAS 290 (314)
T ss_pred CCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHH
Confidence 0 01111223356789999999999999999984
No 317
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=1.5e-32 Score=297.89 Aligned_cols=252 Identities=26% Similarity=0.398 Sum_probs=188.2
Q ss_pred CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCC--CchhHHHHHHHHHhcCCCceeeEecccCC---------
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPNLVTLVGACPE--------- 530 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~--~~~~f~~Ei~iL~~l~HpnIv~L~g~~~~--------- 530 (824)
++|....+||+|+||.||+|... +..||||.+...... ....+.+|+.++++++||||++++++|..
T Consensus 12 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 91 (310)
T cd07865 12 SKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYK 91 (310)
T ss_pred hheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCC
Confidence 46889999999999999999875 578999988653222 12346789999999999999999998732
Q ss_pred -ceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccc
Q 003384 531 -VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGI 609 (824)
Q Consensus 531 -~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGl 609 (824)
..++||||+. ++|.+.+... ...+++..+..++.|++.||.|||+ ++++|+||||+|||++.++.+||+|||+
T Consensus 92 ~~~~lv~e~~~-~~l~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~ 165 (310)
T cd07865 92 GSFYLVFEFCE-HDLAGLLSNK--NVKFTLSEIKKVMKMLLNGLYYIHR---NKILHRDMKAANILITKDGILKLADFGL 165 (310)
T ss_pred ceEEEEEcCCC-cCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEECCCCcEEECcCCC
Confidence 3589999996 4788877432 2468999999999999999999999 8999999999999999999999999999
Q ss_pred ccccccccccCCCccccccCCCCCCcccCChhhhccC-CCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhh----h
Q 003384 610 SRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDT----G 684 (824)
Q Consensus 610 a~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~----~ 684 (824)
+..+......... ......++..|+|||++.+. .++.++||||||+++|+|+||++||............ +
T Consensus 166 ~~~~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~ 241 (310)
T cd07865 166 ARAFSLSKNSKPN----RYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCG 241 (310)
T ss_pred cccccCCcccCCC----CccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhC
Confidence 9866543221111 11334678999999998764 4788999999999999999999999755432111100 0
Q ss_pred cccccc----------C----CCC-------CCCChhhHHHHHHHHHHHhhhccCCCCChHH
Q 003384 685 KLKNLL----------D----PLA-------GDWPFVQAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 685 ~~~~~l----------d----~~~-------~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
.....+ + +.. .-++......+.+|+.+||..+|.+||++.+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e 303 (310)
T cd07865 242 SITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADT 303 (310)
T ss_pred CCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHH
Confidence 000000 0 000 0001122456789999999999999999843
No 318
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.1e-33 Score=310.81 Aligned_cols=247 Identities=27% Similarity=0.384 Sum_probs=193.3
Q ss_pred hhcCCCCccceeeecCceEEEEEEECC-eEEEEEEecCC--CCCCchhHHHHHHHHHhcC-CCceeeEeccc--CCceEE
Q 003384 461 GATHNFDPSLKIGEGGYGSIYKGLLRH-MQVAIKMLHPH--SLQGPSEFQQEIDILSKIR-HPNLVTLVGAC--PEVWTL 534 (824)
Q Consensus 461 ~~~~~f~~~~~LG~G~fG~Vykg~~~~-~~VAvK~l~~~--~~~~~~~f~~Ei~iL~~l~-HpnIv~L~g~~--~~~~~L 534 (824)
.....|+..++||+||.+.||++...+ +.+|+|++... +.+...-|.+|+..|.+|+ |.+||+||+|- +...|+
T Consensus 358 Vkg~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYm 437 (677)
T KOG0596|consen 358 VKGREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYM 437 (677)
T ss_pred ECcchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEE
Confidence 345579999999999999999998875 66788876543 3333567999999999995 99999999975 567899
Q ss_pred EEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccc
Q 003384 535 VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLS 614 (824)
Q Consensus 535 V~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~ 614 (824)
||||-+ .+|..+|..+... ...| .+..+..||+.|+.++|. +||||.||||.|+|+-. |.+||+|||+|..+.
T Consensus 438 vmE~Gd-~DL~kiL~k~~~~-~~~~-~lk~ywkqML~aV~~IH~---~gIVHSDLKPANFLlVk-G~LKLIDFGIA~aI~ 510 (677)
T KOG0596|consen 438 VMECGD-IDLNKILKKKKSI-DPDW-FLKFYWKQMLLAVKTIHQ---HGIVHSDLKPANFLLVK-GRLKLIDFGIANAIQ 510 (677)
T ss_pred Eeeccc-ccHHHHHHhccCC-CchH-HHHHHHHHHHHHHHHHHH---hceeecCCCcccEEEEe-eeEEeeeechhcccC
Confidence 999874 5899999655432 2234 677889999999999999 89999999999999964 589999999999877
Q ss_pred cccccCCCccccccCCCCCCcccCChhhhccC-----------CCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhh
Q 003384 615 QNEISSNNTTLCCRTDPKGTFAYMDPEFLASG-----------ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDT 683 (824)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-----------~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~ 683 (824)
.+.++. .+...+||+.||+||.+... ..++++||||||||||+|+.|++||+......
T Consensus 511 ~DTTsI------~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~----- 579 (677)
T KOG0596|consen 511 PDTTSI------VKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQI----- 579 (677)
T ss_pred ccccce------eeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHHH-----
Confidence 665433 23456799999999998542 25678999999999999999999997544322
Q ss_pred hccccccCC-CCCCCChhhHH-HHHHHHHHHhhhccCCCCChHH
Q 003384 684 GKLKNLLDP-LAGDWPFVQAE-QLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 684 ~~~~~~ld~-~~~~~p~~~~~-~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
.++..+.+| ...++|..... ++.+++..||..||++||++.+
T Consensus 580 aKl~aI~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~e 623 (677)
T KOG0596|consen 580 AKLHAITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPE 623 (677)
T ss_pred HHHHhhcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHH
Confidence 345555565 22344433332 3999999999999999999943
No 319
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=6.7e-33 Score=305.83 Aligned_cols=251 Identities=22% Similarity=0.313 Sum_probs=191.4
Q ss_pred CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC--CCchhHHHHHHHHHhcCCCceeeEecccC------CceE
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVGACP------EVWT 533 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~--~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~------~~~~ 533 (824)
.+|...+.||.|+||.||+|... +..||+|++..... .....+.+|+.+|+.++||||+++++++. ...+
T Consensus 5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 84 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVY 84 (334)
T ss_pred hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEE
Confidence 57888899999999999999875 68899999875422 23456788999999999999999998763 2478
Q ss_pred EEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccc
Q 003384 534 LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFL 613 (824)
Q Consensus 534 LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~ 613 (824)
+||||+. |+|.+++. ....+++..+..++.|++.||.|||. ++|+||||||+|||++.++.+||+|||++...
T Consensus 85 lv~e~~~-~~l~~~~~---~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~ 157 (334)
T cd07855 85 VVMDLME-SDLHHIIH---SDQPLTEEHIRYFLYQLLRGLKYIHS---ANVIHRDLKPSNLLVNEDCELRIGDFGMARGL 157 (334)
T ss_pred EEEehhh-hhHHHHhc---cCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCcEEecccccceee
Confidence 9999995 68988884 23458999999999999999999999 89999999999999999999999999999765
Q ss_pred ccccccCCCccccccCCCCCCcccCChhhhcc-CCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHH---h-------
Q 003384 614 SQNEISSNNTTLCCRTDPKGTFAYMDPEFLAS-GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYAL---D------- 682 (824)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~---~------- 682 (824)
........ .......|+..|+|||++.+ ..++.++|||||||++|+|++|++||.......... .
T Consensus 158 ~~~~~~~~----~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~ 233 (334)
T cd07855 158 SSSPTEHK----YFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSE 233 (334)
T ss_pred cccCcCCC----cccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChh
Confidence 43321110 01123468999999999866 468899999999999999999999996543321100 0
Q ss_pred -------hhccccccCC--CCCCC-----ChhhHHHHHHHHHHHhhhccCCCCChHH
Q 003384 683 -------TGKLKNLLDP--LAGDW-----PFVQAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 683 -------~~~~~~~ld~--~~~~~-----p~~~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
.......... ..... ....+..+.+++.+||+.+|.+||++.+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ 290 (334)
T cd07855 234 EVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQ 290 (334)
T ss_pred HhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHH
Confidence 0000000000 00001 1224678999999999999999999854
No 320
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=1.2e-32 Score=289.00 Aligned_cols=244 Identities=27% Similarity=0.436 Sum_probs=198.3
Q ss_pred CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC--CCchhHHHHHHHHHhcCCCceeeEeccc--CCceEEEEEe
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEY 538 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~--~~~~~f~~Ei~iL~~l~HpnIv~L~g~~--~~~~~LV~Ey 538 (824)
+|...+.||.|+||.||++.+. +..|++|++..... .....+.+|+++++.++|||++++++.+ .+..++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~ 80 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY 80 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence 4777889999999999999987 68899999876543 3445688999999999999999999887 3568899999
Q ss_pred cCCCChhhhhhccC-CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccccc
Q 003384 539 LPNGSLEDRLSCKD-NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNE 617 (824)
Q Consensus 539 ~~ggsL~~~L~~~~-~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~ 617 (824)
+++++|.+++.... ....+++..+..++.+++.||.|||. .|++|+||+|+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~---~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~ 157 (258)
T cd08215 81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHS---RKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV 157 (258)
T ss_pred cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHh---CCEecccCChHHeEEcCCCcEEECCccceeecccCc
Confidence 99999999986432 23679999999999999999999999 799999999999999999999999999998654432
Q ss_pred ccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCCCC
Q 003384 618 ISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDW 697 (824)
Q Consensus 618 ~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~ 697 (824)
.. .....|++.|+|||.+.+..++.++||||||+++|+|++|+.||............ .... ....
T Consensus 158 ~~--------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~--~~~~----~~~~ 223 (258)
T cd08215 158 DL--------AKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKI--LKGQ----YPPI 223 (258)
T ss_pred ce--------ecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHH--hcCC----CCCC
Confidence 11 12235899999999998888999999999999999999999999765432211111 1111 1222
Q ss_pred ChhhHHHHHHHHHHHhhhccCCCCChHH
Q 003384 698 PFVQAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 698 p~~~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
+...+..+.+++.+||..+|.+||++.+
T Consensus 224 ~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ 251 (258)
T cd08215 224 PSQYSSELRNLVSSLLQKDPEERPSIAQ 251 (258)
T ss_pred CCCCCHHHHHHHHHHcCCChhhCcCHHH
Confidence 3345678999999999999999999944
No 321
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=1.6e-32 Score=297.49 Aligned_cols=240 Identities=23% Similarity=0.339 Sum_probs=190.1
Q ss_pred CccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCCchhHHHHHHHHHhcCCCceeeEeccc--CCceEEEEEecCCC
Q 003384 467 DPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYLPNG 542 (824)
Q Consensus 467 ~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~--~~~~~LV~Ey~~gg 542 (824)
+...+||+|+||.||+|... +..||||.+..........+.+|+.+++.++||||+++++.+ .+..++||||++++
T Consensus 23 ~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 102 (292)
T cd06657 23 DNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGG 102 (292)
T ss_pred hhHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCC
Confidence 34467999999999999874 588999988654433445688999999999999999999987 45789999999999
Q ss_pred ChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccccCCC
Q 003384 543 SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNN 622 (824)
Q Consensus 543 sL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~~~~ 622 (824)
+|.+++. ...+++.....++.+++.||.|||+ +|++||||+|+||+++.++.++|+|||++.........
T Consensus 103 ~L~~~~~----~~~~~~~~~~~~~~ql~~~l~~lH~---~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~--- 172 (292)
T cd06657 103 ALTDIVT----HTRMNEEQIAAVCLAVLKALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR--- 172 (292)
T ss_pred cHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEEcccccceeccccccc---
Confidence 9999873 2358899999999999999999999 89999999999999999999999999998755432110
Q ss_pred ccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCCCCChhhH
Q 003384 623 TTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQA 702 (824)
Q Consensus 623 ~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~ 702 (824)
.....|++.|+|||++.+..++.++|||||||++|+|++|.+||............ ...+.+... .....+
T Consensus 173 -----~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~---~~~~~~~~~-~~~~~~ 243 (292)
T cd06657 173 -----RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI---RDNLPPKLK-NLHKVS 243 (292)
T ss_pred -----ccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH---HhhCCcccC-CcccCC
Confidence 12345899999999998888999999999999999999999999755433211110 011111110 112345
Q ss_pred HHHHHHHHHHhhhccCCCCChHH
Q 003384 703 EQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 703 ~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
..+.+++.+||+.+|.+||++.+
T Consensus 244 ~~l~~li~~~l~~~P~~R~~~~~ 266 (292)
T cd06657 244 PSLKGFLDRLLVRDPAQRATAAE 266 (292)
T ss_pred HHHHHHHHHHHhCCcccCcCHHH
Confidence 67899999999999999999944
No 322
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=1.7e-32 Score=305.17 Aligned_cols=246 Identities=21% Similarity=0.278 Sum_probs=189.2
Q ss_pred cCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCC--CCCchhHHHHHHHHHhcCCCceeeEecccC--------C
Q 003384 463 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS--LQGPSEFQQEIDILSKIRHPNLVTLVGACP--------E 530 (824)
Q Consensus 463 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~--~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--------~ 530 (824)
.+.|...+.||+|+||.||+|... +..||||.+.... ......+.+|+.+++.++||||++++++|. .
T Consensus 15 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 94 (353)
T cd07850 15 LKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQ 94 (353)
T ss_pred hcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccC
Confidence 457999999999999999999874 6889999986432 222346778999999999999999999873 2
Q ss_pred ceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccc
Q 003384 531 VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGIS 610 (824)
Q Consensus 531 ~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla 610 (824)
..++||||+. ++|.+.+.. .++...+..++.|++.||.|||. +||+||||||+|||++.++.+||+|||++
T Consensus 95 ~~~lv~e~~~-~~l~~~~~~-----~l~~~~~~~~~~ql~~aL~~LH~---~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~ 165 (353)
T cd07850 95 DVYLVMELMD-ANLCQVIQM-----DLDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLA 165 (353)
T ss_pred cEEEEEeccC-CCHHHHHhh-----cCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEECCCCCEEEccCccc
Confidence 3689999996 588887732 27888999999999999999999 89999999999999999999999999999
Q ss_pred cccccccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhh----h--
Q 003384 611 RFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDT----G-- 684 (824)
Q Consensus 611 ~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~----~-- 684 (824)
+....... .....||..|+|||++.+..++.++|||||||++|+|++|+.||...+........ +
T Consensus 166 ~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 236 (353)
T cd07850 166 RTAGTSFM---------MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTP 236 (353)
T ss_pred eeCCCCCC---------CCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCC
Confidence 86543211 12345889999999999999999999999999999999999999754322110000 0
Q ss_pred -------------------c------cccccCC-----CCCCCChhhHHHHHHHHHHHhhhccCCCCChHHH
Q 003384 685 -------------------K------LKNLLDP-----LAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKD 726 (824)
Q Consensus 685 -------------------~------~~~~ld~-----~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~ 726 (824)
. +...... .....+...+..+.+++.+||+.+|.+||++.+.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ei 308 (353)
T cd07850 237 SDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDA 308 (353)
T ss_pred CHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHH
Confidence 0 0000000 0000012345678999999999999999999543
No 323
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=2e-32 Score=298.20 Aligned_cols=248 Identities=27% Similarity=0.330 Sum_probs=189.5
Q ss_pred cCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCC--chhHHHHHHHHHhcCCCceeeEecccC----CceEE
Q 003384 463 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG--PSEFQQEIDILSKIRHPNLVTLVGACP----EVWTL 534 (824)
Q Consensus 463 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~--~~~f~~Ei~iL~~l~HpnIv~L~g~~~----~~~~L 534 (824)
..+|+..+.||.|+||.||+|.+. +..||+|.+....... ...+.+|+.++++++||||+++++++. +..++
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL 85 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence 347889999999999999999885 5789999987543221 234678999999999999999999873 34789
Q ss_pred EEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccc
Q 003384 535 VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLS 614 (824)
Q Consensus 535 V~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~ 614 (824)
||||+.+ +|.+++... ...+++..+..++.|++.||.|||+ .+++||||||+|||++.++.+||+|||++..+.
T Consensus 86 v~e~~~~-~l~~~l~~~--~~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~ 159 (309)
T cd07845 86 VMEYCEQ-DLASLLDNM--PTPFSESQVKCLMLQLLRGLQYLHE---NFIIHRDLKVSNLLLTDKGCLKIADFGLARTYG 159 (309)
T ss_pred EEecCCC-CHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEECccceeeecC
Confidence 9999964 788887532 3568999999999999999999999 889999999999999999999999999998664
Q ss_pred cccccCCCccccccCCCCCCcccCChhhhcc-CCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccc-----c
Q 003384 615 QNEISSNNTTLCCRTDPKGTFAYMDPEFLAS-GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLK-----N 688 (824)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~-----~ 688 (824)
..... .....+++.|+|||.+.+ ..++.++|||||||++|+|++|++||................ .
T Consensus 160 ~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~ 231 (309)
T cd07845 160 LPAKP--------MTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNES 231 (309)
T ss_pred CccCC--------CCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChh
Confidence 33211 122346889999999876 468899999999999999999999997654433211110000 0
Q ss_pred c---cC------C-CCCCCC--------hhhHHHHHHHHHHHhhhccCCCCChH
Q 003384 689 L---LD------P-LAGDWP--------FVQAEQLANLAMRCCEMSRKSRPELG 724 (824)
Q Consensus 689 ~---ld------~-~~~~~p--------~~~~~~l~~Li~~Cl~~~P~~RPt~~ 724 (824)
. +. . .....+ ...+..+.+++.+|++.+|.+||++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~ 285 (309)
T cd07845 232 IWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAE 285 (309)
T ss_pred hchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHH
Confidence 0 00 0 000000 11356788999999999999999984
No 324
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=1.9e-32 Score=293.21 Aligned_cols=247 Identities=28% Similarity=0.401 Sum_probs=189.1
Q ss_pred CCccceeeecCceEEEEEEEC--CeEEEEEEecCCC--CCCchhHHHHHHHHHhcCCCceeeEecccC----CceEEEEE
Q 003384 466 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS--LQGPSEFQQEIDILSKIRHPNLVTLVGACP----EVWTLVYE 537 (824)
Q Consensus 466 f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~--~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~----~~~~LV~E 537 (824)
|...+.||.|+||.||+|... +..||+|++.... ......+.+|+.+++.++|||++++++++. ...++|||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 566788999999999999886 4889999998653 222346889999999999999999999884 45899999
Q ss_pred ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccccc
Q 003384 538 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNE 617 (824)
Q Consensus 538 y~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~ 617 (824)
|+++ +|.+++... ...+++..+..++.+++.||.|||. ++++|+||+|+|||++.++.+||+|||++.......
T Consensus 81 ~~~~-~l~~~~~~~--~~~~~~~~~~~i~~~i~~al~~LH~---~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~ 154 (287)
T cd07840 81 YMDH-DLTGLLDSP--EVKFTESQIKCYMKQLLEGLQYLHS---NGILHRDIKGSNILINNDGVLKLADFGLARPYTKRN 154 (287)
T ss_pred cccc-cHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCcHHHeEEcCCCCEEEccccceeeccCCC
Confidence 9975 888887432 2478999999999999999999999 899999999999999999999999999998665432
Q ss_pred ccCCCccccccCCCCCCcccCChhhhcc-CCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccc---------
Q 003384 618 ISSNNTTLCCRTDPKGTFAYMDPEFLAS-GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLK--------- 687 (824)
Q Consensus 618 ~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~--------- 687 (824)
... .....++..|+|||.+.+ ..++.++||||||+++|+|+||++||................
T Consensus 155 ~~~-------~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (287)
T cd07840 155 SAD-------YTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWP 227 (287)
T ss_pred ccc-------ccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhcc
Confidence 100 123457889999998765 467899999999999999999999997654322111100000
Q ss_pred cc--------cCCC-------CCCCChhhHHHHHHHHHHHhhhccCCCCChHH
Q 003384 688 NL--------LDPL-------AGDWPFVQAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 688 ~~--------ld~~-------~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
.. ..+. ........+..+.+++.+||+.+|.+||++.+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ 280 (287)
T cd07840 228 GVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQ 280 (287)
T ss_pred ccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHH
Confidence 00 0000 00001112568899999999999999999943
No 325
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=2.1e-32 Score=295.46 Aligned_cols=250 Identities=24% Similarity=0.360 Sum_probs=187.3
Q ss_pred CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC--CCchhHHHHHHHHHhcCCCceeeEecccC--CceEEEEE
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYE 537 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~--~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~E 537 (824)
++|.....||.|+||.||+|... +..||+|.+..... .....+.+|+.+++.++||||+++++++. ...++|||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 36888889999999999999875 57899999865432 22356889999999999999999999984 46889999
Q ss_pred ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecC-CCcceeeccccccccccc
Q 003384 538 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDA-NFVSKLSDFGISRFLSQN 616 (824)
Q Consensus 538 y~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~-~~~vKL~DFGla~~~~~~ 616 (824)
|++ ++|.+++... ....+++.....++.+|+.||.|||. ++++||||+|+||+++. ++.+||+|||++......
T Consensus 82 ~~~-~~l~~~~~~~-~~~~~~~~~~~~~~~qi~~aL~~LH~---~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~ 156 (294)
T PLN00009 82 YLD-LDLKKHMDSS-PDFAKNPRLIKTYLYQILRGIAYCHS---HRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIP 156 (294)
T ss_pred ccc-ccHHHHHHhC-CCCCcCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCcceEEEECCCCEEEEcccccccccCCC
Confidence 996 5787777432 22346788888999999999999999 89999999999999985 567999999999754322
Q ss_pred cccCCCccccccCCCCCCcccCChhhhccC-CCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhcc-----cccc
Q 003384 617 EISSNNTTLCCRTDPKGTFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKL-----KNLL 690 (824)
Q Consensus 617 ~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~-----~~~l 690 (824)
... .....|++.|+|||++.+. .++.++|||||||++|+|+||++||............... ....
T Consensus 157 ~~~--------~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 228 (294)
T PLN00009 157 VRT--------FTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETW 228 (294)
T ss_pred ccc--------cccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhc
Confidence 110 1234578999999998764 5789999999999999999999999765433221111000 0000
Q ss_pred -------C--CCCCCC--------ChhhHHHHHHHHHHHhhhccCCCCChHHH
Q 003384 691 -------D--PLAGDW--------PFVQAEQLANLAMRCCEMSRKSRPELGKD 726 (824)
Q Consensus 691 -------d--~~~~~~--------p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~ 726 (824)
+ .....+ ....+..+.+++.+|++.+|.+||++.+.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~ 281 (294)
T PLN00009 229 PGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAA 281 (294)
T ss_pred cccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHH
Confidence 0 000000 11235678999999999999999999443
No 326
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=1.4e-32 Score=344.56 Aligned_cols=249 Identities=30% Similarity=0.479 Sum_probs=195.3
Q ss_pred CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCCchhHHHHHHHHHhcCCCceeeEecccC--CceEEEEEec
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYL 539 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~Ey~ 539 (824)
..|.....||+|+||.||+|... +..||||.+..... ....|+.++++++|||||+++|+|. +..++||||+
T Consensus 690 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~----~~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~ 765 (968)
T PLN00113 690 SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS----IPSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYI 765 (968)
T ss_pred hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc----ccHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCC
Confidence 34667788999999999999864 68899999864332 2245789999999999999999984 4678999999
Q ss_pred CCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccccccc
Q 003384 540 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEIS 619 (824)
Q Consensus 540 ~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~ 619 (824)
++|+|.+++. .++|..+..|+.+++.||.|||..+..+|+||||||+|||++.++..++. ||........
T Consensus 766 ~~g~L~~~l~------~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~--- 835 (968)
T PLN00113 766 EGKNLSEVLR------NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTD--- 835 (968)
T ss_pred CCCcHHHHHh------cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-eccccccccC---
Confidence 9999999993 38899999999999999999996555799999999999999999888875 6655432211
Q ss_pred CCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCc--------hHHHHHHhhhccccccC
Q 003384 620 SNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGIT--------KEVQYALDTGKLKNLLD 691 (824)
Q Consensus 620 ~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~--------~~~~~~~~~~~~~~~ld 691 (824)
....||+.|+|||++.+..++.++|||||||++|||+||++||+.. .+............+++
T Consensus 836 ---------~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 906 (968)
T PLN00113 836 ---------TKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWID 906 (968)
T ss_pred ---------CCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeC
Confidence 1235899999999999999999999999999999999999998532 11112122222333444
Q ss_pred CCCC---CCChhhHHHHHHHHHHHhhhccCCCCChHHHHHHHHHHHHh
Q 003384 692 PLAG---DWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRA 736 (824)
Q Consensus 692 ~~~~---~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le~l~~ 736 (824)
+... ..+.....++.+++.+||+.+|.+||+| .++++.|+.+..
T Consensus 907 ~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~-~evl~~L~~~~~ 953 (968)
T PLN00113 907 PSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCA-NDVLKTLESASR 953 (968)
T ss_pred ccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCH-HHHHHHHHHhhc
Confidence 4321 2233455678899999999999999999 678888887655
No 327
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=1.3e-32 Score=295.95 Aligned_cols=231 Identities=26% Similarity=0.326 Sum_probs=177.5
Q ss_pred eeeecCceEEEEEEEC--CeEEEEEEecCCCCCC---chhHHHHHHHHHh---cCCCceeeEecccC--CceEEEEEecC
Q 003384 471 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG---PSEFQQEIDILSK---IRHPNLVTLVGACP--EVWTLVYEYLP 540 (824)
Q Consensus 471 ~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~---~~~f~~Ei~iL~~---l~HpnIv~L~g~~~--~~~~LV~Ey~~ 540 (824)
.||+|+||.||++... +..||+|.+....... ...+.+|..++.. .+||||+.+++++. +..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 4899999999999875 5789999886543221 1234455544443 47999999998873 46889999999
Q ss_pred CCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccccC
Q 003384 541 NGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISS 620 (824)
Q Consensus 541 ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~~ 620 (824)
+|+|.+++.. ...+++..+..++.|++.||.|||+ ++|+||||||+|||++.++.+||+|||++........
T Consensus 81 ~~~L~~~i~~---~~~l~~~~~~~i~~qi~~al~~lH~---~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~~-- 152 (279)
T cd05633 81 GGDLHYHLSQ---HGVFSEKEMRFYATEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP-- 152 (279)
T ss_pred CCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcCCCCCCHHHEEECCCCCEEEccCCcceeccccCc--
Confidence 9999998853 3469999999999999999999999 8899999999999999999999999999875432210
Q ss_pred CCccccccCCCCCCcccCChhhhcc-CCCCcchhHHhHHHHHHHHHhCCCCCCCchHH-HHHHhhhccccccCCCCCCCC
Q 003384 621 NNTTLCCRTDPKGTFAYMDPEFLAS-GELTPKSDVYSFGIILLRLLTGRPALGITKEV-QYALDTGKLKNLLDPLAGDWP 698 (824)
Q Consensus 621 ~~~~~~~~~~~~GT~~Y~APE~l~~-~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~-~~~~~~~~~~~~ld~~~~~~p 698 (824)
....||+.|+|||.+.+ ..++.++|||||||++|+|++|+.||...... ......... ......+
T Consensus 153 --------~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~-----~~~~~~~ 219 (279)
T cd05633 153 --------HASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL-----TVNVELP 219 (279)
T ss_pred --------cCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHhh-----cCCcCCc
Confidence 22358999999999864 56889999999999999999999999643211 111111111 1111233
Q ss_pred hhhHHHHHHHHHHHhhhccCCCCC
Q 003384 699 FVQAEQLANLAMRCCEMSRKSRPE 722 (824)
Q Consensus 699 ~~~~~~l~~Li~~Cl~~~P~~RPt 722 (824)
...+..+.+++.+||..+|.+||+
T Consensus 220 ~~~~~~~~~li~~~l~~~p~~R~~ 243 (279)
T cd05633 220 DSFSPELKSLLEGLLQRDVSKRLG 243 (279)
T ss_pred cccCHHHHHHHHHHhcCCHHHhcC
Confidence 445678999999999999999995
No 328
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=2e-32 Score=292.50 Aligned_cols=239 Identities=19% Similarity=0.272 Sum_probs=182.0
Q ss_pred cCCCCcccee--eecCceEEEEEEEC--CeEEEEEEecCCCCCCchhHHHHHHHHHhc-CCCceeeEeccc--CCceEEE
Q 003384 463 THNFDPSLKI--GEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKI-RHPNLVTLVGAC--PEVWTLV 535 (824)
Q Consensus 463 ~~~f~~~~~L--G~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l-~HpnIv~L~g~~--~~~~~LV 535 (824)
.++|.+.+.+ |.|+||.||++... +..+|+|.+....... .|+.+...+ +||||++++++| .+..++|
T Consensus 13 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~-----~e~~~~~~~~~h~~iv~~~~~~~~~~~~~iv 87 (267)
T PHA03390 13 LKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA-----IEPMVHQLMKDNPNFIKLYYSVTTLKGHVLI 87 (267)
T ss_pred HHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch-----hhHHHHHHhhcCCCEEEEEEEEecCCeeEEE
Confidence 3455555555 99999999999865 5789999986543221 133333323 799999999987 4578999
Q ss_pred EEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCC-cceeeccccccccc
Q 003384 536 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANF-VSKLSDFGISRFLS 614 (824)
Q Consensus 536 ~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~-~vKL~DFGla~~~~ 614 (824)
|||+++|+|.+++... .++++..+..++.|++.||.|||+ .+++||||||+||+++.++ .++|+|||++....
T Consensus 88 ~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~ 161 (267)
T PHA03390 88 MDYIKDGDLFDLLKKE---GKLSEAEVKKIIRQLVEALNDLHK---HNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIG 161 (267)
T ss_pred EEcCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEEeCCCCeEEEecCccceecC
Confidence 9999999999998532 379999999999999999999999 8899999999999999988 99999999987553
Q ss_pred cccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCC
Q 003384 615 QNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLA 694 (824)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~ 694 (824)
.. ....|+..|+|||++.+..++.++|||||||++|+|++|+.||......... ...+.... ...
T Consensus 162 ~~------------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~--~~~~~~~~-~~~ 226 (267)
T PHA03390 162 TP------------SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELD--LESLLKRQ-QKK 226 (267)
T ss_pred CC------------ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhh--HHHHHHhh-ccc
Confidence 22 1234899999999999889999999999999999999999999743221110 00011111 111
Q ss_pred CCCChhhHHHHHHHHHHHhhhccCCCCChHHHH
Q 003384 695 GDWPFVQAEQLANLAMRCCEMSRKSRPELGKDV 727 (824)
Q Consensus 695 ~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v 727 (824)
...+...+..+.+++.+||+.+|.+||+..+++
T Consensus 227 ~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~ 259 (267)
T PHA03390 227 LPFIKNVSKNANDFVQSMLKYNINYRLTNYNEI 259 (267)
T ss_pred CCcccccCHHHHHHHHHHhccChhhCCchHHHH
Confidence 122335667899999999999999999642433
No 329
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=3.8e-32 Score=297.62 Aligned_cols=240 Identities=28% Similarity=0.377 Sum_probs=187.4
Q ss_pred CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCC---chhHHHHHHHHHhcCCCceeeEecccC--CceEEEEE
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG---PSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYE 537 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~---~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~E 537 (824)
.|...+.||+|+||.||+|... +..||+|.+....... ...+.+|+.+++.++|||+++++++|. +..++|||
T Consensus 26 ~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 105 (317)
T cd06635 26 LFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVME 105 (317)
T ss_pred hhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEe
Confidence 3777889999999999999874 5789999987543322 246888999999999999999999884 46789999
Q ss_pred ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccccc
Q 003384 538 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNE 617 (824)
Q Consensus 538 y~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~ 617 (824)
|++| +|.+.+.. ...++++..+..++.+++.||.|||. ++|+||||+|+||+++.++.+||+|||++......
T Consensus 106 ~~~g-~l~~~~~~--~~~~l~~~~~~~i~~~i~~~l~~lH~---~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~- 178 (317)
T cd06635 106 YCLG-SASDLLEV--HKKPLQEVEIAAITHGALQGLAYLHS---HNMIHRDIKAGNILLTEPGQVKLADFGSASIASPA- 178 (317)
T ss_pred CCCC-CHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcccEEECCCCCEEEecCCCccccCCc-
Confidence 9974 77777642 23568999999999999999999999 89999999999999999999999999998654321
Q ss_pred ccCCCccccccCCCCCCcccCChhhhc---cCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCC
Q 003384 618 ISSNNTTLCCRTDPKGTFAYMDPEFLA---SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLA 694 (824)
Q Consensus 618 ~~~~~~~~~~~~~~~GT~~Y~APE~l~---~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~ 694 (824)
....|++.|+|||++. .+.++.++|||||||++|+|++|++||.............. ... +
T Consensus 179 -----------~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~--~~~-~-- 242 (317)
T cd06635 179 -----------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQ--NES-P-- 242 (317)
T ss_pred -----------ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHh--ccC-C--
Confidence 2235889999999974 45688999999999999999999999865432221111100 000 0
Q ss_pred CCCChhhHHHHHHHHHHHhhhccCCCCChHHHHH
Q 003384 695 GDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW 728 (824)
Q Consensus 695 ~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~ 728 (824)
...+...+..+.+++.+||+.+|.+||++ .+++
T Consensus 243 ~~~~~~~~~~l~~li~~~l~~~p~~Rpt~-~~il 275 (317)
T cd06635 243 TLQSNEWSDYFRNFVDSCLQKIPQDRPTS-EELL 275 (317)
T ss_pred CCCCccccHHHHHHHHHHccCCcccCcCH-HHHH
Confidence 01122345679999999999999999999 4443
No 330
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=3.1e-32 Score=291.37 Aligned_cols=243 Identities=24% Similarity=0.315 Sum_probs=183.5
Q ss_pred CCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCC-CchhHHHHHHHHHhcC-CCceeeEecccC----CceEEEEE
Q 003384 466 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIR-HPNLVTLVGACP----EVWTLVYE 537 (824)
Q Consensus 466 f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~-HpnIv~L~g~~~----~~~~LV~E 537 (824)
|...+.||+|+||.||+|... +..||+|.+...... ......+|+.++.++. ||||+++++++. +..++|||
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence 556778999999999999874 578999998754221 2224457999999985 999999999873 45889999
Q ss_pred ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccccc
Q 003384 538 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNE 617 (824)
Q Consensus 538 y~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~ 617 (824)
|++ |+|.+.+... ...+++..+..++.+++.||.|||. .+++||||+|+||+++. +.+||+|||++..+....
T Consensus 81 ~~~-~~l~~~l~~~--~~~~~~~~~~~~~~qi~~~L~~LH~---~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~ 153 (282)
T cd07831 81 LMD-MNLYELIKGR--KRPLPEKRVKSYMYQLLKSLDHMHR---NGIFHRDIKPENILIKD-DILKLADFGSCRGIYSKP 153 (282)
T ss_pred cCC-ccHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHH---CCceecccCHHHEEEcC-CCeEEEecccccccccCC
Confidence 997 5777777432 3468999999999999999999999 89999999999999999 999999999998654322
Q ss_pred ccCCCccccccCCCCCCcccCChhhhcc-CCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhcc----c----c
Q 003384 618 ISSNNTTLCCRTDPKGTFAYMDPEFLAS-GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKL----K----N 688 (824)
Q Consensus 618 ~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~----~----~ 688 (824)
.. ....++..|+|||++.. +.++.++|||||||++|||++|.+||...+........... . .
T Consensus 154 ~~---------~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (282)
T cd07831 154 PY---------TEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLK 224 (282)
T ss_pred Cc---------CCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHH
Confidence 11 12347899999997654 55788999999999999999999999765432211110000 0 0
Q ss_pred ccCC---CCCCC-----------ChhhHHHHHHHHHHHhhhccCCCCChH
Q 003384 689 LLDP---LAGDW-----------PFVQAEQLANLAMRCCEMSRKSRPELG 724 (824)
Q Consensus 689 ~ld~---~~~~~-----------p~~~~~~l~~Li~~Cl~~~P~~RPt~~ 724 (824)
.+.. ....+ ....+..+.+++.+||+.+|.+||++.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~ 274 (282)
T cd07831 225 KFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAK 274 (282)
T ss_pred hhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHH
Confidence 0000 00001 113467899999999999999999994
No 331
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=6.8e-33 Score=298.73 Aligned_cols=241 Identities=26% Similarity=0.355 Sum_probs=188.2
Q ss_pred CCCccceeeecCceEEEEEEE-----CCeEEEEEEecCCCC----CCchhHHHHHHHHHhc-CCCceeeEecccC--Cce
Q 003384 465 NFDPSLKIGEGGYGSIYKGLL-----RHMQVAIKMLHPHSL----QGPSEFQQEIDILSKI-RHPNLVTLVGACP--EVW 532 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~-----~~~~VAvK~l~~~~~----~~~~~f~~Ei~iL~~l-~HpnIv~L~g~~~--~~~ 532 (824)
+|+..+.||.|+||.||++.. .+..||+|++..... ...+.+.+|+.++..+ +||||+++++++. ...
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 467788999999999999876 467899999875322 1235688899999999 5999999998874 357
Q ss_pred EEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccc
Q 003384 533 TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRF 612 (824)
Q Consensus 533 ~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~ 612 (824)
++||||+++++|.+++.. ..++++.....++.+++.||.|||+ .+++||||+|+|||++.++.+||+|||++..
T Consensus 81 ~lv~e~~~~~~L~~~l~~---~~~l~~~~~~~~~~qi~~al~~lH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~ 154 (290)
T cd05613 81 HLILDYINGGELFTHLSQ---RERFKEQEVQIYSGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKE 154 (290)
T ss_pred EEEEecCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeEECCCCCEEEeeCcccee
Confidence 899999999999999853 3468889999999999999999999 8999999999999999999999999999986
Q ss_pred cccccccCCCccccccCCCCCCcccCChhhhccC--CCCcchhHHhHHHHHHHHHhCCCCCCCchHHH--HHHhhhcccc
Q 003384 613 LSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG--ELTPKSDVYSFGIILLRLLTGRPALGITKEVQ--YALDTGKLKN 688 (824)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~--~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~--~~~~~~~~~~ 688 (824)
........ .....|+..|+|||++... .++.++||||||+++|+|+||..||....... ..+..
T Consensus 155 ~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~----- 222 (290)
T cd05613 155 FHEDEVER-------AYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISR----- 222 (290)
T ss_pred cccccccc-------cccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHH-----
Confidence 54322111 1234589999999998753 47789999999999999999999996432110 11111
Q ss_pred ccCCCCCCCChhhHHHHHHHHHHHhhhccCCCCCh
Q 003384 689 LLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPEL 723 (824)
Q Consensus 689 ~ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~ 723 (824)
.+......++...+..+.+++.+||+.+|.+||+.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~ 257 (290)
T cd05613 223 RILKSEPPYPQEMSALAKDIIQRLLMKDPKKRLGC 257 (290)
T ss_pred HhhccCCCCCccCCHHHHHHHHHHhcCCHHHhcCC
Confidence 11111122344566789999999999999999853
No 332
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=1.8e-32 Score=292.23 Aligned_cols=246 Identities=27% Similarity=0.403 Sum_probs=197.1
Q ss_pred CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC---CCchhHHHHHHHHHhcC-CCceeeEecccC--CceEEEE
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL---QGPSEFQQEIDILSKIR-HPNLVTLVGACP--EVWTLVY 536 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~---~~~~~f~~Ei~iL~~l~-HpnIv~L~g~~~--~~~~LV~ 536 (824)
+|.....||.|+||.||+|... +..||+|++..... .....+..|+.+++++. ||||+++++++. +..++||
T Consensus 2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~ 81 (280)
T cd05581 2 DFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVL 81 (280)
T ss_pred CceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEE
Confidence 6788889999999999999885 68899999875322 22346889999999998 999999999884 4688999
Q ss_pred EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccc
Q 003384 537 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQN 616 (824)
Q Consensus 537 Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~ 616 (824)
||+++++|.+++.. ...+++..+..|+.+++.||.|||. .+++|+||+|+||+++.++.++|+|||++......
T Consensus 82 e~~~~~~L~~~l~~---~~~l~~~~~~~i~~ql~~~l~~Lh~---~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~ 155 (280)
T cd05581 82 EYAPNGELLQYIRK---YGSLDEKCTRFYAAEILLALEYLHS---KGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPN 155 (280)
T ss_pred cCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHeEECCCCCEEecCCccccccCCc
Confidence 99999999999953 3469999999999999999999999 89999999999999999999999999999866543
Q ss_pred cccCCC------------ccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhh
Q 003384 617 EISSNN------------TTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTG 684 (824)
Q Consensus 617 ~~~~~~------------~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~ 684 (824)
...... ..........|+..|+|||.+....++.++||||||+++++|++|++||.............
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~ 235 (280)
T cd05581 156 SSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKIL 235 (280)
T ss_pred cccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHH
Confidence 211000 00111234568899999999988889999999999999999999999997665332211111
Q ss_pred ccccccCCCCCCCChhhHHHHHHHHHHHhhhccCCCCCh
Q 003384 685 KLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPEL 723 (824)
Q Consensus 685 ~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~ 723 (824)
.....++...+..+.+++.+||+.+|.+||++
T Consensus 236 -------~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~ 267 (280)
T cd05581 236 -------KLEYSFPPNFPPDAKDLIEKLLVLDPQDRLGV 267 (280)
T ss_pred -------hcCCCCCCccCHHHHHHHHHHhcCCHhhCCCc
Confidence 11122344446789999999999999999998
No 333
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=2.3e-32 Score=303.30 Aligned_cols=256 Identities=21% Similarity=0.297 Sum_probs=193.9
Q ss_pred cCCCChhhHhhhcCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC--CCchhHHHHHHHHHhcCCCceeeEec
Q 003384 451 FSDFSFSEIEGATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVG 526 (824)
Q Consensus 451 ~~~~~~~ei~~~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~--~~~~~f~~Ei~iL~~l~HpnIv~L~g 526 (824)
++.....++...+++|...+.||+|+||.||+|... +..||+|++..... .....+.+|+.++++++||||+++++
T Consensus 4 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~ 83 (345)
T cd07877 4 YRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 83 (345)
T ss_pred chhhHHHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceee
Confidence 334445566677889999999999999999999864 57899999875321 12346788999999999999999998
Q ss_pred ccC--------CceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecC
Q 003384 527 ACP--------EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDA 598 (824)
Q Consensus 527 ~~~--------~~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~ 598 (824)
++. ...+++++++ +++|.+++.. ..+++..+..++.|++.||.|||+ ++|+||||||+||+++.
T Consensus 84 ~~~~~~~~~~~~~~~lv~~~~-~~~L~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIll~~ 155 (345)
T cd07877 84 VFTPARSLEEFNDVYLVTHLM-GADLNNIVKC----QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNE 155 (345)
T ss_pred eeeecccccccccEEEEehhc-ccCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCChHHEEEcC
Confidence 773 2357788876 7899888742 358999999999999999999999 89999999999999999
Q ss_pred CCcceeeccccccccccccccCCCccccccCCCCCCcccCChhhhcc-CCCCcchhHHhHHHHHHHHHhCCCCCCCchHH
Q 003384 599 NFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLAS-GELTPKSDVYSFGIILLRLLTGRPALGITKEV 677 (824)
Q Consensus 599 ~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~ 677 (824)
++.+||+|||++....... ....||..|+|||.+.+ ..++.++|||||||++|+|++|++||......
T Consensus 156 ~~~~kl~dfg~~~~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~ 224 (345)
T cd07877 156 DCELKILDFGLARHTDDEM-----------TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI 224 (345)
T ss_pred CCCEEEecccccccccccc-----------cccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 9999999999987543211 22357899999999876 56889999999999999999999999654332
Q ss_pred HHHHhh----h----------------ccccccCC----CCCCCChhhHHHHHHHHHHHhhhccCCCCChHH
Q 003384 678 QYALDT----G----------------KLKNLLDP----LAGDWPFVQAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 678 ~~~~~~----~----------------~~~~~ld~----~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
...... + .....+.. ...+.....+..+.+++.+|++.+|.+||+..+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e 296 (345)
T cd07877 225 DQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 296 (345)
T ss_pred HHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHH
Confidence 111000 0 00000000 000111123567899999999999999999843
No 334
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=3e-32 Score=291.26 Aligned_cols=246 Identities=26% Similarity=0.335 Sum_probs=191.0
Q ss_pred CCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCC--CchhHHHHHHHHHhcCCCceeeEecccC--CceEEEEEec
Q 003384 466 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYL 539 (824)
Q Consensus 466 f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~--~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~Ey~ 539 (824)
|.....||.|++|.||+|... +..+++|.+...... ....+.+|+.+++.++||||+++++++. ...++||||+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM 80 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence 456678999999999999875 578999998754332 3456889999999999999999999874 4688999999
Q ss_pred CCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccccccc
Q 003384 540 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEIS 619 (824)
Q Consensus 540 ~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~ 619 (824)
++ +|.+++... ...+++..+..++.+++.||.|||. ++|+|+||||+||+++.++.+||+|||++.........
T Consensus 81 ~~-~l~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~~ 154 (283)
T cd05118 81 DT-DLYKLIKDR--QRGLPESLIKSYLYQLLQGLAFCHS---HGILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRP 154 (283)
T ss_pred CC-CHHHHHHhh--cccCCHHHHHHHHHHHHHHHHHHHH---CCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCccc
Confidence 75 888887543 2578999999999999999999999 88999999999999999999999999999876543210
Q ss_pred CCCccccccCCCCCCcccCChhhhccC-CCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhc---------cccc
Q 003384 620 SNNTTLCCRTDPKGTFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGK---------LKNL 689 (824)
Q Consensus 620 ~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~---------~~~~ 689 (824)
.....++..|+|||.+.+. .++.++||||||+++|+|+||++||...+.......... +...
T Consensus 155 --------~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (283)
T cd05118 155 --------YTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKF 226 (283)
T ss_pred --------ccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccc
Confidence 1224578899999998876 789999999999999999999999976554332111100 0000
Q ss_pred cC--------------CCCCCCChhhHHHHHHHHHHHhhhccCCCCChHH
Q 003384 690 LD--------------PLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 690 ld--------------~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
.. ..........+..+.+++.+||+.+|.+||++.+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ 276 (283)
T cd05118 227 TSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQ 276 (283)
T ss_pred hhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHH
Confidence 00 0000011224568999999999999999999954
No 335
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=2.1e-32 Score=289.73 Aligned_cols=231 Identities=24% Similarity=0.298 Sum_probs=181.0
Q ss_pred ceeeecCceEEEEEEEC--CeEEEEEEecCCCCCC---chhHHHHHHHH-HhcCCCceeeEecccC--CceEEEEEecCC
Q 003384 470 LKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG---PSEFQQEIDIL-SKIRHPNLVTLVGACP--EVWTLVYEYLPN 541 (824)
Q Consensus 470 ~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~---~~~f~~Ei~iL-~~l~HpnIv~L~g~~~--~~~~LV~Ey~~g 541 (824)
+.||.|+||.||+|... +..||||++....... ...+..|..++ ..++||||+++++++. +..++||||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 46999999999999874 5789999986543221 12344555544 4558999999999984 468999999999
Q ss_pred CChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccccCC
Q 003384 542 GSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSN 621 (824)
Q Consensus 542 gsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~~~ 621 (824)
++|.+++.. ..++++..+..++.|++.||.|||. .+++||||+|+|||++.++.+||+|||++......
T Consensus 82 ~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~----- 150 (260)
T cd05611 82 GDCASLIKT---LGGLPEDWAKQYIAEVVLGVEDLHQ---RGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLEN----- 150 (260)
T ss_pred CCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCcEEEeecccceecccc-----
Confidence 999999843 3468899999999999999999999 88999999999999999999999999998754321
Q ss_pred CccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHH--HhhhccccccCCCCCCCCh
Q 003384 622 NTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYA--LDTGKLKNLLDPLAGDWPF 699 (824)
Q Consensus 622 ~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~--~~~~~~~~~ld~~~~~~p~ 699 (824)
....|++.|+|||.+.+..++.++||||||+++|+|+||.+||......... ...+.. . .....+.
T Consensus 151 -------~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~----~-~~~~~~~ 218 (260)
T cd05611 151 -------KKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRI----N-WPEEVKE 218 (260)
T ss_pred -------ccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhccc----C-CCCcccc
Confidence 2235889999999998888999999999999999999999999755432211 111111 0 0111122
Q ss_pred hhHHHHHHHHHHHhhhccCCCCCh
Q 003384 700 VQAEQLANLAMRCCEMSRKSRPEL 723 (824)
Q Consensus 700 ~~~~~l~~Li~~Cl~~~P~~RPt~ 723 (824)
..+..+.+++.+||+.+|.+||+.
T Consensus 219 ~~~~~~~~~i~~~l~~~p~~R~~~ 242 (260)
T cd05611 219 FCSPEAVDLINRLLCMDPAKRLGA 242 (260)
T ss_pred cCCHHHHHHHHHHccCCHHHccCC
Confidence 346789999999999999999986
No 336
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=1.9e-32 Score=302.82 Aligned_cols=249 Identities=25% Similarity=0.306 Sum_probs=190.2
Q ss_pred cCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCC--CCCchhHHHHHHHHHhcCCCceeeEecccCC-------c
Q 003384 463 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS--LQGPSEFQQEIDILSKIRHPNLVTLVGACPE-------V 531 (824)
Q Consensus 463 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~--~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~~-------~ 531 (824)
...|...+.||+|+||.||+|... +..||||.+.... ......+.+|+.+++.++||||+++++++.. .
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 346888999999999999999875 5889999987532 2234467789999999999999999998732 3
Q ss_pred eEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccc
Q 003384 532 WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISR 611 (824)
Q Consensus 532 ~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~ 611 (824)
.++||||+. ++|.+++. ....+++..+..++.|++.||.|||+ ++++||||||+|||++.++.+||+|||++.
T Consensus 84 ~~lv~e~~~-~~L~~~~~---~~~~l~~~~~~~i~~qi~~aL~~LH~---~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~ 156 (337)
T cd07858 84 VYIVYELMD-TDLHQIIR---SSQTLSDDHCQYFLYQLLRGLKYIHS---ANVLHRDLKPSNLLLNANCDLKICDFGLAR 156 (337)
T ss_pred EEEEEeCCC-CCHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCEEECcCcccc
Confidence 689999995 68888874 33569999999999999999999999 899999999999999999999999999998
Q ss_pred ccccccccCCCccccccCCCCCCcccCChhhhcc-CCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHh--------
Q 003384 612 FLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLAS-GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALD-------- 682 (824)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~-------- 682 (824)
........ .....|+..|+|||.+.. ..++.++|||||||++|+|++|++||...+.......
T Consensus 157 ~~~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 228 (337)
T cd07858 157 TTSEKGDF--------MTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSP 228 (337)
T ss_pred ccCCCccc--------ccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCC
Confidence 65432111 123357899999998865 4688999999999999999999999975432211000
Q ss_pred ---------hhcccccc-------CCCCCCCChhhHHHHHHHHHHHhhhccCCCCChHHH
Q 003384 683 ---------TGKLKNLL-------DPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKD 726 (824)
Q Consensus 683 ---------~~~~~~~l-------d~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~ 726 (824)
.......+ .+.........+..+.+++.+||+.+|.+||++.+.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~el 288 (337)
T cd07858 229 SEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEA 288 (337)
T ss_pred ChHHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHH
Confidence 00000000 000001112345678999999999999999998443
No 337
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=3.7e-32 Score=294.18 Aligned_cols=250 Identities=27% Similarity=0.351 Sum_probs=190.6
Q ss_pred cCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC--CCchhHHHHHHHHHhcCCCceeeEecccCC--------
Q 003384 463 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVGACPE-------- 530 (824)
Q Consensus 463 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~--~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~~-------- 530 (824)
..+|+....||.|+||.||+|... +..||||.+..... .....+.+|+.+++.++||||+++++++.+
T Consensus 6 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~~ 85 (302)
T cd07864 6 VDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDFK 85 (302)
T ss_pred hhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhcc
Confidence 457888999999999999999985 57899999875432 223467889999999999999999998732
Q ss_pred ----ceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeec
Q 003384 531 ----VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSD 606 (824)
Q Consensus 531 ----~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~D 606 (824)
..++|+||+++ +|.+.+... ...+++..+..++.+++.||.|||+ .+|+||||||+||+++.++.+||+|
T Consensus 86 ~~~~~~~lv~e~~~~-~l~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~---~~i~H~dl~p~nili~~~~~~kl~d 159 (302)
T cd07864 86 KDKGAFYLVFEYMDH-DLMGLLESG--LVHFSEDHIKSFMKQLLEGLNYCHK---KNFLHRDIKCSNILLNNKGQIKLAD 159 (302)
T ss_pred ccCCcEEEEEcccCc-cHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCcEEeCc
Confidence 57899999976 677766432 3468999999999999999999999 8999999999999999999999999
Q ss_pred cccccccccccccCCCccccccCCCCCCcccCChhhhccC-CCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhc
Q 003384 607 FGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGK 685 (824)
Q Consensus 607 FGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~ 685 (824)
||++..+....... .....++..|+|||.+.+. .++.++|||||||++|+|++|++||..............
T Consensus 160 fg~~~~~~~~~~~~-------~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~ 232 (302)
T cd07864 160 FGLARLYNSEESRP-------YTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISR 232 (302)
T ss_pred ccccccccCCcccc-------cccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Confidence 99998665432110 0223468899999988653 578899999999999999999999976544332211110
Q ss_pred c-----cc----c--------cCCCC------CCCChhhHHHHHHHHHHHhhhccCCCCChHH
Q 003384 686 L-----KN----L--------LDPLA------GDWPFVQAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 686 ~-----~~----~--------ld~~~------~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
. .. + .++.. .......+..+.+++.+||+.+|.+||++.+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~ 295 (302)
T cd07864 233 LCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEE 295 (302)
T ss_pred HhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHH
Confidence 0 00 0 00000 0001123678999999999999999999843
No 338
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=3.1e-32 Score=295.56 Aligned_cols=257 Identities=25% Similarity=0.311 Sum_probs=189.7
Q ss_pred cCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCC--chhHHHHHHHHHhcCCCceeeEecccC---------
Q 003384 463 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG--PSEFQQEIDILSKIRHPNLVTLVGACP--------- 529 (824)
Q Consensus 463 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~--~~~f~~Ei~iL~~l~HpnIv~L~g~~~--------- 529 (824)
.++|...++||.|+||.||+|... +..||||.+......+ ...+.+|+++++.++||||+++++.+.
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 458999999999999999999875 5789999886543222 345789999999999999999998762
Q ss_pred -CceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccc
Q 003384 530 -EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFG 608 (824)
Q Consensus 530 -~~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFG 608 (824)
...++||||+.+ +|...+.. ....+++..+..++.+++.||.|||. ++|+||||||+|||++.++.+||+|||
T Consensus 87 ~~~~~lv~~~~~~-~l~~~~~~--~~~~~~~~~~~~i~~~l~~al~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg 160 (311)
T cd07866 87 RGSVYMVTPYMDH-DLSGLLEN--PSVKLTESQIKCYMLQLLEGINYLHE---NHILHRDIKAANILIDNQGILKIADFG 160 (311)
T ss_pred CceEEEEEecCCc-CHHHHHhc--cccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEECcCc
Confidence 136899999965 67666642 34569999999999999999999999 899999999999999999999999999
Q ss_pred cccccccccccCCCc---cccccCCCCCCcccCChhhhccC-CCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhh
Q 003384 609 ISRFLSQNEISSNNT---TLCCRTDPKGTFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTG 684 (824)
Q Consensus 609 la~~~~~~~~~~~~~---~~~~~~~~~GT~~Y~APE~l~~~-~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~ 684 (824)
++............. .....+...|++.|+|||++.+. .++.++|||||||++|+|++|++||.............
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~ 240 (311)
T cd07866 161 LARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIF 240 (311)
T ss_pred cchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 998654432211110 00111344678999999988654 58899999999999999999999997554332111100
Q ss_pred cc---------------ccccC-CCCCCCC-------hhhHHHHHHHHHHHhhhccCCCCChHH
Q 003384 685 KL---------------KNLLD-PLAGDWP-------FVQAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 685 ~~---------------~~~ld-~~~~~~p-------~~~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
.. ....+ ......+ ......+.+++.+||+.+|.+||++.+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~e 304 (311)
T cd07866 241 KLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASD 304 (311)
T ss_pred HHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHH
Confidence 00 00000 0000011 112257889999999999999999843
No 339
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-33 Score=316.90 Aligned_cols=196 Identities=34% Similarity=0.541 Sum_probs=170.2
Q ss_pred CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCC-CCCchhHHHHHHHHHhcCCCceeeEecccC--------CceE
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS-LQGPSEFQQEIDILSKIRHPNLVTLVGACP--------EVWT 533 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~-~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--------~~~~ 533 (824)
.+.....||+||||.||+|+.+ |..||||.++... ....+...+|+++|++|+|||||+++++=. ....
T Consensus 14 ~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~v 93 (732)
T KOG4250|consen 14 LWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPV 93 (732)
T ss_pred ceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccce
Confidence 3455667999999999999875 6889999998753 344567889999999999999999998753 3457
Q ss_pred EEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEec--CCC--cceeecccc
Q 003384 534 LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLD--ANF--VSKLSDFGI 609 (824)
Q Consensus 534 LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld--~~~--~vKL~DFGl 609 (824)
+|||||.||||+..|....+...|+....+.+..++..||.|||. +|||||||||.||++- .+| .-||+|||.
T Consensus 94 lvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrE---n~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~ 170 (732)
T KOG4250|consen 94 LVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRE---NGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGA 170 (732)
T ss_pred EEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHH---cCceeccCCCCcEEEeecCCCceEEeeecccc
Confidence 999999999999999888888889999999999999999999998 8999999999999994 334 459999999
Q ss_pred ccccccccccCCCccccccCCCCCCcccCChhhhcc-CCCCcchhHHhHHHHHHHHHhCCCCCC
Q 003384 610 SRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLAS-GELTPKSDVYSFGIILLRLLTGRPALG 672 (824)
Q Consensus 610 a~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~t~ksDVwSlGvvL~ELltG~~Pf~ 672 (824)
|+-+.++.. .++.+||..|++||.+.. ..|+..+|.|||||++|+++||..||-
T Consensus 171 Arel~d~s~---------~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~ 225 (732)
T KOG4250|consen 171 ARELDDNSL---------FTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFI 225 (732)
T ss_pred cccCCCCCe---------eeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCC
Confidence 998776541 256789999999999984 788999999999999999999999984
No 340
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=7.2e-33 Score=312.62 Aligned_cols=197 Identities=30% Similarity=0.395 Sum_probs=167.2
Q ss_pred CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCCchhHHHHHHHHHhcC-C-----CceeeEeccc--CCceEE
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIR-H-----PNLVTLVGAC--PEVWTL 534 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~-H-----pnIv~L~g~~--~~~~~L 534 (824)
+|.+...||+|.||.|.++.+. +..||||+++.... -..+-..|+.||..|+ | -|+|+++++| .++.||
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~-f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlci 265 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKR-FLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCI 265 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccChH-HHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceee
Confidence 7888999999999999999886 47899999986432 1345667999999997 3 4899999987 678999
Q ss_pred EEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCC--Ccceeeccccccc
Q 003384 535 VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDAN--FVSKLSDFGISRF 612 (824)
Q Consensus 535 V~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~--~~vKL~DFGla~~ 612 (824)
|+|.+ ..+|+++|... ...+|+...+..|+.||+.||.+||. .+|||+||||+||||..- ..+||+|||.|+.
T Consensus 266 VfELL-~~NLYellK~n-~f~Glsl~~ir~~~~Qil~~L~~L~~---l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~ 340 (586)
T KOG0667|consen 266 VFELL-STNLYELLKNN-KFRGLSLPLVRKFAQQILTALLFLHE---LGIIHCDLKPENILLKDPKRSRIKVIDFGSSCF 340 (586)
T ss_pred eehhh-hhhHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCChhheeeccCCcCceeEEecccccc
Confidence 99999 56999999654 34569999999999999999999999 899999999999999643 3799999999997
Q ss_pred cccccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHH
Q 003384 613 LSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQ 678 (824)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~ 678 (824)
...... ...-+..|.|||++.+.+|+.+.||||||||++||+||.|.|.+.+++.
T Consensus 341 ~~q~vy-----------tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~D 395 (586)
T KOG0667|consen 341 ESQRVY-----------TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYD 395 (586)
T ss_pred cCCcce-----------eeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHH
Confidence 665432 1235789999999999999999999999999999999999998766543
No 341
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=2.1e-32 Score=302.12 Aligned_cols=254 Identities=28% Similarity=0.392 Sum_probs=190.7
Q ss_pred cCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCC--CCCCchhHHHHHHHHHhc-CCCceeeEecccCC----ceE
Q 003384 463 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPH--SLQGPSEFQQEIDILSKI-RHPNLVTLVGACPE----VWT 533 (824)
Q Consensus 463 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~--~~~~~~~f~~Ei~iL~~l-~HpnIv~L~g~~~~----~~~ 533 (824)
..+|...+.||+|+||.||+|.+. +..||||.+... .......+.+|+.+++++ +||||++++|+|.. ..+
T Consensus 6 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~ 85 (337)
T cd07852 6 LRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIY 85 (337)
T ss_pred hhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEE
Confidence 346888889999999999999875 578999988542 222334577899999999 99999999998732 478
Q ss_pred EEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccc
Q 003384 534 LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFL 613 (824)
Q Consensus 534 LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~ 613 (824)
+||||++ ++|..++.. ..+++..+..++.+++.||.|||+ +||+||||||+|||++.++.+||+|||++..+
T Consensus 86 lv~e~~~-~~L~~~~~~----~~~~~~~~~~i~~qi~~~L~~LH~---~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~ 157 (337)
T cd07852 86 LVFEYME-TDLHAVIRA----NILEDVHKRYIMYQLLKALKYIHS---GNVIHRDLKPSNILLNSDCRVKLADFGLARSL 157 (337)
T ss_pred EEecccc-cCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCcEEEeeccchhcc
Confidence 9999997 589888742 268889999999999999999999 89999999999999999999999999999876
Q ss_pred ccccccCCCccccccCCCCCCcccCChhhhcc-CCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhh---------
Q 003384 614 SQNEISSNNTTLCCRTDPKGTFAYMDPEFLAS-GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDT--------- 683 (824)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~--------- 683 (824)
.......... ......||..|+|||++.+ ..++.++|||||||++|+|+||++||............
T Consensus 158 ~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~ 234 (337)
T cd07852 158 SELEENPENP---VLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSA 234 (337)
T ss_pred ccccccccCc---chhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCH
Confidence 5433211101 1123468999999998765 46788999999999999999999999654322110000
Q ss_pred --------hccccccCCC-------CCCCChhhHHHHHHHHHHHhhhccCCCCChHHHH
Q 003384 684 --------GKLKNLLDPL-------AGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDV 727 (824)
Q Consensus 684 --------~~~~~~ld~~-------~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v 727 (824)
.....+++.. ........+..+.+++.+||+.+|.+||++.+.+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il 293 (337)
T cd07852 235 EDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEAL 293 (337)
T ss_pred HHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHh
Confidence 0000000000 0011112456899999999999999999995443
No 342
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=3.8e-32 Score=291.93 Aligned_cols=230 Identities=26% Similarity=0.334 Sum_probs=177.8
Q ss_pred eeeecCceEEEEEEEC--CeEEEEEEecCCCCCC---chhHHHHHHH---HHhcCCCceeeEecccC--CceEEEEEecC
Q 003384 471 KIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG---PSEFQQEIDI---LSKIRHPNLVTLVGACP--EVWTLVYEYLP 540 (824)
Q Consensus 471 ~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~---~~~f~~Ei~i---L~~l~HpnIv~L~g~~~--~~~~LV~Ey~~ 540 (824)
.||+|+||.||+|... +..||+|.+....... ...+..|..+ ++...||||+++++++. +..++||||++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 4899999999999764 5789999987543221 1224445443 44457999999999874 46889999999
Q ss_pred CCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccccC
Q 003384 541 NGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISS 620 (824)
Q Consensus 541 ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~~ 620 (824)
||+|.+++. ....+++..+..++.|++.||.|||+ .+|+||||||+|||++.++.+||+|||++..+....
T Consensus 81 g~~L~~~l~---~~~~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~--- 151 (278)
T cd05606 81 GGDLHYHLS---QHGVFSEAEMRFYAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK--- 151 (278)
T ss_pred CCcHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHH---CCEEcCCCCHHHEEECCCCCEEEccCcCccccCccC---
Confidence 999999884 33569999999999999999999999 889999999999999999999999999987543221
Q ss_pred CCccccccCCCCCCcccCChhhhccC-CCCcchhHHhHHHHHHHHHhCCCCCCCchHHHH-HHhhhccccccCCCCCCCC
Q 003384 621 NNTTLCCRTDPKGTFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLTGRPALGITKEVQY-ALDTGKLKNLLDPLAGDWP 698 (824)
Q Consensus 621 ~~~~~~~~~~~~GT~~Y~APE~l~~~-~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~-~~~~~~~~~~ld~~~~~~p 698 (824)
.....|+..|+|||++.++ .++.++|||||||++|+|++|+.||........ ..... .......+|
T Consensus 152 -------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~ 219 (278)
T cd05606 152 -------PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRM-----TLTMAVELP 219 (278)
T ss_pred -------CcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHH-----hhccCCCCC
Confidence 0223589999999998755 689999999999999999999999975421110 01111 001112234
Q ss_pred hhhHHHHHHHHHHHhhhccCCCC
Q 003384 699 FVQAEQLANLAMRCCEMSRKSRP 721 (824)
Q Consensus 699 ~~~~~~l~~Li~~Cl~~~P~~RP 721 (824)
...+..+.+++.+|+..+|.+||
T Consensus 220 ~~~s~~~~~li~~~l~~~p~~R~ 242 (278)
T cd05606 220 DSFSPELRSLLEGLLQRDVNRRL 242 (278)
T ss_pred CcCCHHHHHHHHHHhhcCHHhcc
Confidence 44567899999999999999999
No 343
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-33 Score=297.11 Aligned_cols=238 Identities=23% Similarity=0.304 Sum_probs=192.1
Q ss_pred CCCCccceeeecCceEEEEEEECC--eEEEEEEecCCCC---CCchhHHHHHHHHHhc-CCCceeeEeccc--CCceEEE
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSL---QGPSEFQQEIDILSKI-RHPNLVTLVGAC--PEVWTLV 535 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~~~--~~VAvK~l~~~~~---~~~~~f~~Ei~iL~~l-~HpnIv~L~g~~--~~~~~LV 535 (824)
.+|+...+||+|+||.|..|..++ ..+|||++++... .+.+--..|-.+|... +-|.+++|..+| .+.+|.|
T Consensus 349 tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFV 428 (683)
T KOG0696|consen 349 TDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFV 428 (683)
T ss_pred cccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeE
Confidence 478999999999999999998876 4599999987532 2223334677777766 467888888887 4689999
Q ss_pred EEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccc
Q 003384 536 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQ 615 (824)
Q Consensus 536 ~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~ 615 (824)
|||+.||+|.-++.. -+.+.+.....+|.+||-||-|||+ +|||.||||.+|||||..|++||+|||+++----
T Consensus 429 MEyvnGGDLMyhiQQ---~GkFKEp~AvFYAaEiaigLFFLh~---kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~ 502 (683)
T KOG0696|consen 429 MEYVNGGDLMYHIQQ---VGKFKEPVAVFYAAEIAIGLFFLHS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIF 502 (683)
T ss_pred EEEecCchhhhHHHH---hcccCCchhhhhhHHHHHHhhhhhc---CCeeeeeccccceEeccCCceEeeeccccccccc
Confidence 999999999988843 3457778889999999999999999 9999999999999999999999999999974221
Q ss_pred ccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCC
Q 003384 616 NEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAG 695 (824)
Q Consensus 616 ~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~ 695 (824)
.. .+ ..+..|||.|+|||++..++|+..+|||||||+||||+.|+|||++.++.......... .-
T Consensus 503 ~~----~T----TkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~eh-------nv 567 (683)
T KOG0696|consen 503 DG----VT----TKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEH-------NV 567 (683)
T ss_pred CC----cc----eeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHc-------cC
Confidence 11 11 13456999999999999999999999999999999999999999987654422211111 12
Q ss_pred CCChhhHHHHHHHHHHHhhhccCCCCC
Q 003384 696 DWPFVQAEQLANLAMRCCEMSRKSRPE 722 (824)
Q Consensus 696 ~~p~~~~~~l~~Li~~Cl~~~P~~RPt 722 (824)
.+|...+.+...+....+...|.+|-.
T Consensus 568 syPKslSkEAv~ickg~ltK~P~kRLG 594 (683)
T KOG0696|consen 568 SYPKSLSKEAVAICKGLLTKHPGKRLG 594 (683)
T ss_pred cCcccccHHHHHHHHHHhhcCCccccC
Confidence 356777889999999999999999854
No 344
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6.6e-34 Score=336.62 Aligned_cols=248 Identities=25% Similarity=0.321 Sum_probs=195.9
Q ss_pred hhcCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC--CCchhHHHHHHHHHhcCCCceeeEeccc--CCceEE
Q 003384 461 GATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTL 534 (824)
Q Consensus 461 ~~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~--~~~~~f~~Ei~iL~~l~HpnIv~L~g~~--~~~~~L 534 (824)
..+-++.....||.|.||.||.|... |.-.|+|-++.... .....+.+|+.+|..|+|||+|++||+= .+..+|
T Consensus 1232 nV~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~I 1311 (1509)
T KOG4645|consen 1232 NVTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYI 1311 (1509)
T ss_pred cceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHH
Confidence 44557788889999999999999865 56689997765432 2345688999999999999999999974 567889
Q ss_pred EEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccc
Q 003384 535 VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLS 614 (824)
Q Consensus 535 V~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~ 614 (824)
.||||.+|+|.+++.. +.-.++.....+..|++.||+|||+ +|||||||||+||||+.+|.+|++|||.|..+.
T Consensus 1312 FMEyC~~GsLa~ll~~---gri~dE~vt~vyt~qll~gla~LH~---~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~ 1385 (1509)
T KOG4645|consen 1312 FMEYCEGGSLASLLEH---GRIEDEMVTRVYTKQLLEGLAYLHE---HGIVHRDIKPANILLDFNGLIKYGDFGSAVKIK 1385 (1509)
T ss_pred HHHHhccCcHHHHHHh---cchhhhhHHHHHHHHHHHHHHHHHh---cCceecCCCccceeeecCCcEEeecccceeEec
Confidence 9999999999999953 3446667777889999999999999 899999999999999999999999999998776
Q ss_pred cccccCCCccccccCCCCCCcccCChhhhccC---CCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccC
Q 003384 615 QNEISSNNTTLCCRTDPKGTFAYMDPEFLASG---ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLD 691 (824)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~---~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld 691 (824)
....... ..-...+||+.|||||++.+. +...+.||||+|||.+||+||+.||...+.-...+.. ..-
T Consensus 1386 ~~~~~~~----~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~-----V~~ 1456 (1509)
T KOG4645|consen 1386 NNAQTMP----GELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYH-----VAA 1456 (1509)
T ss_pred CchhcCC----HHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhH-----Hhc
Confidence 5521111 112456899999999999763 5667899999999999999999999644332221111 111
Q ss_pred CCCCCCChhhHHHHHHHHHHHhhhccCCCCCh
Q 003384 692 PLAGDWPFVQAEQLANLAMRCCEMSRKSRPEL 723 (824)
Q Consensus 692 ~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~ 723 (824)
.-.+..|...+.+-.+++.+||+.||+.|-+.
T Consensus 1457 gh~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~ 1488 (1509)
T KOG4645|consen 1457 GHKPQIPERLSSEGRDFLEHCLEQDPKMRWTA 1488 (1509)
T ss_pred cCCCCCchhhhHhHHHHHHHHHhcCchhhhHH
Confidence 12234566678889999999999999999554
No 345
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=4.7e-32 Score=293.52 Aligned_cols=245 Identities=25% Similarity=0.347 Sum_probs=186.0
Q ss_pred CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCC-CchhHHHHHHHHHhcC-CCceeeEecccC--CceEEEEE
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIR-HPNLVTLVGACP--EVWTLVYE 537 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~-HpnIv~L~g~~~--~~~~LV~E 537 (824)
++|.....||.|+||.||+|.+. +..||||.+...... ....+..|+.++.++. ||||++++|+|. ...++|||
T Consensus 15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e 94 (296)
T cd06618 15 NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICME 94 (296)
T ss_pred chheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEee
Confidence 46788899999999999999987 688999998754322 2345677887777775 999999999984 46889999
Q ss_pred ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccccc
Q 003384 538 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNE 617 (824)
Q Consensus 538 y~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~ 617 (824)
|+. ++|.+++... ..++++..+..++.+++.||.|||+. .+|+||||+|+||+++.++.+||+|||++..+....
T Consensus 95 ~~~-~~l~~l~~~~--~~~l~~~~~~~i~~~i~~~l~~lH~~--~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~ 169 (296)
T cd06618 95 LMS-TCLDKLLKRI--QGPIPEDILGKMTVAIVKALHYLKEK--HGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSK 169 (296)
T ss_pred ccC-cCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhh--CCEecCCCcHHHEEEcCCCCEEECccccchhccCCC
Confidence 985 5777766432 23789999999999999999999972 379999999999999999999999999987654322
Q ss_pred ccCCCccccccCCCCCCcccCChhhhccCC----CCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCC
Q 003384 618 ISSNNTTLCCRTDPKGTFAYMDPEFLASGE----LTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPL 693 (824)
Q Consensus 618 ~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~----~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~ 693 (824)
.. ....|+..|+|||++.+.. ++.++|||||||++|+|++|+.||.........+.. .+.... +.
T Consensus 170 ~~---------~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~-~~~~~~-~~ 238 (296)
T cd06618 170 AK---------TRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTK-ILQEEP-PS 238 (296)
T ss_pred cc---------cCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHH-HhcCCC-CC
Confidence 11 2234788999999987553 788999999999999999999999653221111111 000000 00
Q ss_pred CCCCChhhHHHHHHHHHHHhhhccCCCCChHH
Q 003384 694 AGDWPFVQAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 694 ~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
.......+..+.+|+.+||+.+|.+||++.+
T Consensus 239 -~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~ 269 (296)
T cd06618 239 -LPPNEGFSPDFCSFVDLCLTKDHRKRPKYRE 269 (296)
T ss_pred -CCCCCCCCHHHHHHHHHHccCChhhCCCHHH
Confidence 1111234678999999999999999999943
No 346
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=1.6e-32 Score=295.49 Aligned_cols=248 Identities=25% Similarity=0.334 Sum_probs=191.3
Q ss_pred CCCccceeeecCceEEEEEEEC-----CeEEEEEEecCCCC----CCchhHHHHHHHHHhc-CCCceeeEecccC--Cce
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR-----HMQVAIKMLHPHSL----QGPSEFQQEIDILSKI-RHPNLVTLVGACP--EVW 532 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~-----~~~VAvK~l~~~~~----~~~~~f~~Ei~iL~~l-~HpnIv~L~g~~~--~~~ 532 (824)
+|...+.||+|+||.||++... +..||||++..... .....+.+|+.++.++ +||||+++++.+. ...
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 3677789999999999998753 46799999864321 2234688999999999 5999999998874 467
Q ss_pred EEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccc
Q 003384 533 TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRF 612 (824)
Q Consensus 533 ~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~ 612 (824)
++||||+++|+|.+++.. ...+++.....++.|++.||.|||. .+++||||+|.||+++.++.++|+|||+++.
T Consensus 81 ~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~ql~~~l~~lH~---~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~ 154 (288)
T cd05583 81 HLILDYVNGGELFTHLYQ---REHFTESEVRVYIAEIVLALDHLHQ---LGIIYRDIKLENILLDSEGHVVLTDFGLSKE 154 (288)
T ss_pred EEEEecCCCCcHHHHHhh---cCCcCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEEEECccccc
Confidence 899999999999998843 3468899999999999999999999 8999999999999999999999999999876
Q ss_pred cccccccCCCccccccCCCCCCcccCChhhhccCC--CCcchhHHhHHHHHHHHHhCCCCCCCchHH--HHHHhhhcccc
Q 003384 613 LSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGE--LTPKSDVYSFGIILLRLLTGRPALGITKEV--QYALDTGKLKN 688 (824)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~--~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~--~~~~~~~~~~~ 688 (824)
+....... .....|+..|+|||.+.+.. ++.++||||||+++|+|+||..||...... ...+......
T Consensus 155 ~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~- 226 (288)
T cd05583 155 FLAEEEER-------AYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILK- 226 (288)
T ss_pred cccccccc-------cccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHc-
Confidence 54332110 12345899999999987654 788999999999999999999999643211 1111111111
Q ss_pred ccCCCCCCCChhhHHHHHHHHHHHhhhccCCCCChHHHHHHHH
Q 003384 689 LLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVL 731 (824)
Q Consensus 689 ~ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~L 731 (824)
.....+...+..+.+++.+||+.+|.+||++ ..+.+.|
T Consensus 227 ----~~~~~~~~~~~~l~~li~~~l~~~p~~R~t~-~~~~~~l 264 (288)
T cd05583 227 ----SKPPFPKTMSAEARDFIQKLLEKDPKKRLGA-NGADEIK 264 (288)
T ss_pred ----cCCCCCcccCHHHHHHHHHHhcCCHhhccCc-chHHHHh
Confidence 1112233455688999999999999999998 4554444
No 347
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=3.8e-32 Score=301.12 Aligned_cols=243 Identities=23% Similarity=0.345 Sum_probs=185.2
Q ss_pred CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC--CCchhHHHHHHHHHhcCCCceeeEecccCC--------c
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVGACPE--------V 531 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~--~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~~--------~ 531 (824)
.+|.....||+|+||.||+|... +..||||++..... .....+.+|+.+++.++||||++++++|.. .
T Consensus 15 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 94 (342)
T cd07879 15 ERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQD 94 (342)
T ss_pred cceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCce
Confidence 57888899999999999999864 68899999865321 123457899999999999999999998732 3
Q ss_pred eEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccc
Q 003384 532 WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISR 611 (824)
Q Consensus 532 ~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~ 611 (824)
+++|+||+. ++|..++ ...+++..+..++.+++.||.|||. ++|+||||||+|||++.++.+||+|||+++
T Consensus 95 ~~lv~e~~~-~~l~~~~-----~~~~~~~~~~~~~~qi~~aL~~LH~---~~i~H~dlkp~NIll~~~~~~kL~dfg~~~ 165 (342)
T cd07879 95 FYLVMPYMQ-TDLQKIM-----GHPLSEDKVQYLVYQMLCGLKYIHS---AGIIHRDLKPGNLAVNEDCELKILDFGLAR 165 (342)
T ss_pred EEEEecccc-cCHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEeeCCCCc
Confidence 589999996 4776655 2358899999999999999999999 899999999999999999999999999987
Q ss_pred ccccccccCCCccccccCCCCCCcccCChhhhcc-CCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhc-----
Q 003384 612 FLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLAS-GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGK----- 685 (824)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~----- 685 (824)
...... ....||..|+|||++.+ ..++.++|||||||++|||++|+.||..............
T Consensus 166 ~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 234 (342)
T cd07879 166 HADAEM-----------TGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVP 234 (342)
T ss_pred CCCCCC-----------CCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCC
Confidence 542211 23357889999999876 4688999999999999999999999976543221110000
Q ss_pred ------------cccccC--CC--CCCC---ChhhHHHHHHHHHHHhhhccCCCCChHHH
Q 003384 686 ------------LKNLLD--PL--AGDW---PFVQAEQLANLAMRCCEMSRKSRPELGKD 726 (824)
Q Consensus 686 ------------~~~~ld--~~--~~~~---p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~ 726 (824)
...... +. ...+ ....+..+.+|+.+||+.+|.+||++.+.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~ 294 (342)
T cd07879 235 GPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEA 294 (342)
T ss_pred CHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHH
Confidence 000000 00 0000 01234578899999999999999999433
No 348
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=4.6e-32 Score=285.27 Aligned_cols=242 Identities=31% Similarity=0.415 Sum_probs=195.0
Q ss_pred CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCC--CchhHHHHHHHHHhcCCCceeeEecccC--CceEEEEEe
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEY 538 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~--~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~Ey 538 (824)
+|+...+||.|+||.||++... +..+++|.+...... ....+.+|+.+++.++||||+++++++. ...++||||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY 80 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence 4677889999999999999875 578999998754322 2346788999999999999999998873 468899999
Q ss_pred cCCCChhhhhhcc-CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccccc
Q 003384 539 LPNGSLEDRLSCK-DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNE 617 (824)
Q Consensus 539 ~~ggsL~~~L~~~-~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~ 617 (824)
+++++|.+++... .....+++..+..++.+++.||.|||+ .|++||||+|.||+++.++.+||+|||++.......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~---~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~ 157 (256)
T cd08530 81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHE---QKILHRDLKSANILLVANDLVKIGDLGISKVLKKNM 157 (256)
T ss_pred cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCcceEEEecCCcEEEeeccchhhhccCC
Confidence 9999999988542 223568999999999999999999999 899999999999999999999999999998765431
Q ss_pred ccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCCCC
Q 003384 618 ISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDW 697 (824)
Q Consensus 618 ~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~ 697 (824)
. ....|++.|++||.+.+..++.++|+||||+++|+|++|++||............ ... .....
T Consensus 158 ~----------~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~--~~~----~~~~~ 221 (256)
T cd08530 158 A----------KTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKV--QRG----KYPPI 221 (256)
T ss_pred c----------ccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH--hcC----CCCCC
Confidence 1 1234789999999999888999999999999999999999999765533221111 111 11122
Q ss_pred ChhhHHHHHHHHHHHhhhccCCCCChHH
Q 003384 698 PFVQAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 698 p~~~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
+...+.++.+++.+|++.+|.+||++.+
T Consensus 222 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~ 249 (256)
T cd08530 222 PPIYSQDLQNFIRSMLQVKPKLRPNCDK 249 (256)
T ss_pred chhhCHHHHHHHHHHcCCCcccCCCHHH
Confidence 3345678999999999999999999943
No 349
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=1e-31 Score=287.80 Aligned_cols=246 Identities=29% Similarity=0.380 Sum_probs=186.9
Q ss_pred CCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCC--chhHHHHHHHHHhc---CCCceeeEecccC--Cc-----
Q 003384 466 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG--PSEFQQEIDILSKI---RHPNLVTLVGACP--EV----- 531 (824)
Q Consensus 466 f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~--~~~f~~Ei~iL~~l---~HpnIv~L~g~~~--~~----- 531 (824)
|+....||.|+||.||+|.+. +..||+|++....... ...+.+|+.++.++ +||||++++++|. +.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 566788999999999999986 5889999997543221 23567788887766 5999999999883 33
Q ss_pred eEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccc
Q 003384 532 WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISR 611 (824)
Q Consensus 532 ~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~ 611 (824)
.+++|||+.+ +|.+++.... ...+++..+..++.+++.||.|||+ ++++|+||+|+|||++.++.+||+|||++.
T Consensus 81 ~~l~~e~~~~-~l~~~l~~~~-~~~l~~~~~~~~~~~i~~al~~LH~---~~i~h~~l~~~nili~~~~~~~l~dfg~~~ 155 (287)
T cd07838 81 LTLVFEHVDQ-DLATYLSKCP-KPGLPPETIKDLMRQLLRGVDFLHS---HRIVHRDLKPQNILVTSDGQVKIADFGLAR 155 (287)
T ss_pred eEEEehhccc-CHHHHHHHcc-CCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCChhhEEEccCCCEEEeccCcce
Confidence 7899999974 8988885432 2358999999999999999999999 889999999999999999999999999987
Q ss_pred ccccccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccc----
Q 003384 612 FLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLK---- 687 (824)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~---- 687 (824)
.+...... ....++..|+|||++.+..++.++|||||||++|+|+||++||............-...
T Consensus 156 ~~~~~~~~---------~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (287)
T cd07838 156 IYSFEMAL---------TSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPS 226 (287)
T ss_pred eccCCccc---------ccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCC
Confidence 76433211 12347889999999998899999999999999999999999997654332211100000
Q ss_pred ------------cccCCCCC----CCChhhHHHHHHHHHHHhhhccCCCCChHH
Q 003384 688 ------------NLLDPLAG----DWPFVQAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 688 ------------~~ld~~~~----~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
..+..... ......+..+.+++.+||+.+|.+||++.+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~ 280 (287)
T cd07838 227 EEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFE 280 (287)
T ss_pred hHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHH
Confidence 00000000 001123467889999999999999999943
No 350
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=4.6e-32 Score=287.10 Aligned_cols=243 Identities=24% Similarity=0.349 Sum_probs=190.0
Q ss_pred CCCccceeeecCceEEEEEEECC--eEEEEEEecCCCC-----CCchhHHHHHHHHHhcCCCceeeEecccC--CceEEE
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSL-----QGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLV 535 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~~--~~VAvK~l~~~~~-----~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV 535 (824)
+|.+.+.||+|+||.||++.+.. ..+++|+++.... .....+..|+.+++.++||||+++++++. +..++|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 36777899999999999998764 4466666654221 12235778999999999999999999884 468899
Q ss_pred EEecCCCChhhhhhcc-CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccc
Q 003384 536 YEYLPNGSLEDRLSCK-DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLS 614 (824)
Q Consensus 536 ~Ey~~ggsL~~~L~~~-~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~ 614 (824)
|||+++++|.+++... .....+++..+..++.+++.||.|||+ +|++|+||+|+||+++. +.+||+|||++....
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~ 156 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQ---RRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLM 156 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHH---cCccccCCChhheEeec-CCEeecccCceeecC
Confidence 9999999999988542 234579999999999999999999999 89999999999999985 569999999988654
Q ss_pred cccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCC
Q 003384 615 QNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLA 694 (824)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~ 694 (824)
..... .....|++.|+|||.+.+..++.++||||||+++|+|++|..||............ .....
T Consensus 157 ~~~~~--------~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~------~~~~~ 222 (260)
T cd08222 157 GSCDL--------ATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRI------VEGPT 222 (260)
T ss_pred CCccc--------ccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHH------HcCCC
Confidence 32211 12345889999999998888999999999999999999999999754433221111 11112
Q ss_pred CCCChhhHHHHHHHHHHHhhhccCCCCChHH
Q 003384 695 GDWPFVQAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 695 ~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
...+...+..+.+++.+||..+|.+||++.+
T Consensus 223 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ 253 (260)
T cd08222 223 PSLPETYSRQLNSIMQSMLNKDPSLRPSAAE 253 (260)
T ss_pred CCCcchhcHHHHHHHHHHhcCChhhCcCHHH
Confidence 2234456678999999999999999999943
No 351
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=4.8e-33 Score=311.22 Aligned_cols=238 Identities=21% Similarity=0.373 Sum_probs=186.4
Q ss_pred ccceeeecCceEEEEEEECCe--EEE---EEEecCC-CCCCchhHHHHHHHHHhcCCCceeeEecccCC----ceEEEEE
Q 003384 468 PSLKIGEGGYGSIYKGLLRHM--QVA---IKMLHPH-SLQGPSEFQQEIDILSKIRHPNLVTLVGACPE----VWTLVYE 537 (824)
Q Consensus 468 ~~~~LG~G~fG~Vykg~~~~~--~VA---vK~l~~~-~~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~~----~~~LV~E 537 (824)
...+||+|+|-+||+|.+... .|| ||.-... .......|..|+.+|+.|+|||||++|+++.+ ...+|.|
T Consensus 44 ~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTE 123 (632)
T KOG0584|consen 44 FDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITE 123 (632)
T ss_pred hhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeee
Confidence 345699999999999988643 343 2322111 12223679999999999999999999999843 3678999
Q ss_pred ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecC-CCcceeeccccccccccc
Q 003384 538 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDA-NFVSKLSDFGISRFLSQN 616 (824)
Q Consensus 538 y~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~-~~~vKL~DFGla~~~~~~ 616 (824)
.+..|+|..++.+ ...++...+..|+.||++||.|||+..| ||||||||.+||||+. -|.|||+|+|||......
T Consensus 124 L~TSGtLr~Y~kk---~~~vn~kaik~W~RQILkGL~yLHs~~P-PIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s 199 (632)
T KOG0584|consen 124 LFTSGTLREYRKK---HRRVNIKAIKSWCRQILKGLVYLHSQDP-PIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKS 199 (632)
T ss_pred cccCCcHHHHHHH---hccCCHHHHHHHHHHHHHHhhhhhcCCC-CccccccccceEEEcCCcCceeecchhHHHHhhcc
Confidence 9999999999953 3457788999999999999999999775 8999999999999975 589999999999987654
Q ss_pred cccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCch---HHHHHHhhhccccccCCC
Q 003384 617 EISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITK---EVQYALDTGKLKNLLDPL 693 (824)
Q Consensus 617 ~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~---~~~~~~~~~~~~~~ld~~ 693 (824)
.. ....|||.|||||++. ..|+..+||||||++|+||+|+..||.--. .+...+..|..-..+.
T Consensus 200 ~a----------ksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~sl~-- 266 (632)
T KOG0584|consen 200 HA----------KSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAALS-- 266 (632)
T ss_pred cc----------ceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHHHhh--
Confidence 31 3457999999999987 789999999999999999999999995322 2333333333222221
Q ss_pred CCCCChhhHHHHHHHHHHHhhhccCCCCChHHHHH
Q 003384 694 AGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVW 728 (824)
Q Consensus 694 ~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~ 728 (824)
....+++.+||.+|+.. ..+||+..+.+.
T Consensus 267 -----kV~dPevr~fIekCl~~-~~~R~sa~eLL~ 295 (632)
T KOG0584|consen 267 -----KVKDPEVREFIEKCLAT-KSERLSAKELLK 295 (632)
T ss_pred -----ccCCHHHHHHHHHHhcC-chhccCHHHHhh
Confidence 22245899999999999 999999955443
No 352
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=4.4e-32 Score=290.61 Aligned_cols=246 Identities=25% Similarity=0.361 Sum_probs=187.6
Q ss_pred CCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCC-CchhHHHHHHHHHhcC-CCceeeEeccc--CCceEEEEEec
Q 003384 466 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIR-HPNLVTLVGAC--PEVWTLVYEYL 539 (824)
Q Consensus 466 f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~-HpnIv~L~g~~--~~~~~LV~Ey~ 539 (824)
|...+.||.|+||+||+|... +..|+||.+...... ......+|+..+++++ ||||+++++++ .+..++||||+
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM 80 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence 556778999999999999985 578999998654321 2234567999999999 99999999988 34689999999
Q ss_pred CCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccccccc
Q 003384 540 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEIS 619 (824)
Q Consensus 540 ~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~ 619 (824)
+|+|.+++.... ...+++..+..++.+++.+|.|||+ ++++|+||+|.||+++.++.++|+|||++.........
T Consensus 81 -~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~Lh~---~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~~ 155 (283)
T cd07830 81 -EGNLYQLMKDRK-GKPFSESVIRSIIYQILQGLAHIHK---HGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPPY 155 (283)
T ss_pred -CCCHHHHHHhcc-cccCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChhhEEEcCCCCEEEeecccceeccCCCCc
Confidence 889998885433 3468999999999999999999999 89999999999999999999999999998765432111
Q ss_pred CCCccccccCCCCCCcccCChhhhcc-CCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhc-------------
Q 003384 620 SNNTTLCCRTDPKGTFAYMDPEFLAS-GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGK------------- 685 (824)
Q Consensus 620 ~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~------------- 685 (824)
....|+..|+|||++.. ..++.++||||||+++|+|++|++||..............
T Consensus 156 ---------~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (283)
T cd07830 156 ---------TDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEG 226 (283)
T ss_pred ---------CCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhH
Confidence 22357899999998854 4578999999999999999999999975543322111100
Q ss_pred ------cccccCCC----CCCCChhhHHHHHHHHHHHhhhccCCCCChHH
Q 003384 686 ------LKNLLDPL----AGDWPFVQAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 686 ------~~~~ld~~----~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
....+... ........+..+.+++.+||+.+|.+||++.+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~e 276 (283)
T cd07830 227 YKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQ 276 (283)
T ss_pred hhhhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHH
Confidence 00000000 00111112467999999999999999999943
No 353
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=8.5e-32 Score=296.30 Aligned_cols=252 Identities=21% Similarity=0.241 Sum_probs=184.8
Q ss_pred eeeec--CceEEEEEEE--CCeEEEEEEecCCCCCC--chhHHHHHHHHHhcCCCceeeEecccC--CceEEEEEecCCC
Q 003384 471 KIGEG--GYGSIYKGLL--RHMQVAIKMLHPHSLQG--PSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYLPNG 542 (824)
Q Consensus 471 ~LG~G--~fG~Vykg~~--~~~~VAvK~l~~~~~~~--~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~Ey~~gg 542 (824)
.||+| +||+||++.+ .++.||||++....... .+.+.+|+.+++.++||||++++++|. +..++||||+.+|
T Consensus 5 ~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~~ 84 (328)
T cd08226 5 EIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAYG 84 (328)
T ss_pred HhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccCC
Confidence 46666 9999999987 46899999987543222 356889999999999999999999984 4678999999999
Q ss_pred ChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccccCCC
Q 003384 543 SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNN 622 (824)
Q Consensus 543 sL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~~~~ 622 (824)
+|.+++.... ...+++..+..++.|++.||.|||+ ++|+||||||+|||++.++.+|++|||.+............
T Consensus 85 ~l~~~l~~~~-~~~~~~~~~~~~~~qi~~aL~~lH~---~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (328)
T cd08226 85 SANSLLKTYF-PEGMSEALIGNILFGALRGLNYLHQ---NGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKV 160 (328)
T ss_pred CHHHHHHhhc-ccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccccc
Confidence 9999886432 2358899999999999999999999 89999999999999999999999999876543322111100
Q ss_pred ccccccCCCCCCcccCChhhhccC--CCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccc-------------
Q 003384 623 TTLCCRTDPKGTFAYMDPEFLASG--ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLK------------- 687 (824)
Q Consensus 623 ~~~~~~~~~~GT~~Y~APE~l~~~--~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~------------- 687 (824)
.........++..|+|||++.+. .++.++|||||||++|+|++|++||............-...
T Consensus 161 -~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (328)
T cd08226 161 -VYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCE 239 (328)
T ss_pred -cccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchh
Confidence 00000112356789999999764 57899999999999999999999997543322211100000
Q ss_pred --------------------------ccc-CCCCCCCChhhHHHHHHHHHHHhhhccCCCCChHHHH
Q 003384 688 --------------------------NLL-DPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDV 727 (824)
Q Consensus 688 --------------------------~~l-d~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v 727 (824)
... .......+...+..+.+|+.+||+.+|.+||++.+.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l 306 (328)
T cd08226 240 ESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLL 306 (328)
T ss_pred hhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHh
Confidence 000 0001111223466899999999999999999995443
No 354
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=5.7e-32 Score=299.94 Aligned_cols=246 Identities=23% Similarity=0.329 Sum_probs=189.3
Q ss_pred hcCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCC--CchhHHHHHHHHHhcCCCceeeEecccCC-------
Q 003384 462 ATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKIRHPNLVTLVGACPE------- 530 (824)
Q Consensus 462 ~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~--~~~~f~~Ei~iL~~l~HpnIv~L~g~~~~------- 530 (824)
..++|...+.||+|+||.||+|... +..||||++...... ....+.+|+.+|+.++||||+++++++..
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07880 13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRF 92 (343)
T ss_pred cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccccc
Confidence 4567999999999999999999875 578999998643211 23457899999999999999999998732
Q ss_pred -ceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccc
Q 003384 531 -VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGI 609 (824)
Q Consensus 531 -~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGl 609 (824)
.+++||||+ +++|.+++. ...+++..+..++.|++.||.|||. .||+||||||+|||++.++.+||+|||+
T Consensus 93 ~~~~lv~e~~-~~~l~~~~~----~~~l~~~~~~~i~~qi~~al~~LH~---~gi~H~dlkp~Nill~~~~~~kl~dfg~ 164 (343)
T cd07880 93 HDFYLVMPFM-GTDLGKLMK----HEKLSEDRIQFLVYQMLKGLKYIHA---AGIIHRDLKPGNLAVNEDCELKILDFGL 164 (343)
T ss_pred ceEEEEEecC-CCCHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeeccc
Confidence 358999999 779988873 2468999999999999999999999 8999999999999999999999999999
Q ss_pred ccccccccccCCCccccccCCCCCCcccCChhhhcc-CCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhcc--
Q 003384 610 SRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLAS-GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKL-- 686 (824)
Q Consensus 610 a~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~-- 686 (824)
+....... ....+++.|+|||.+.+ ..++.++|||||||++|+|++|++||...............
T Consensus 165 ~~~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~ 233 (343)
T cd07880 165 ARQTDSEM-----------TGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTG 233 (343)
T ss_pred ccccccCc-----------cccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcC
Confidence 87543211 23357899999999876 45889999999999999999999999765432211110000
Q ss_pred ---------------ccccCCC-------CCCCChhhHHHHHHHHHHHhhhccCCCCChHHH
Q 003384 687 ---------------KNLLDPL-------AGDWPFVQAEQLANLAMRCCEMSRKSRPELGKD 726 (824)
Q Consensus 687 ---------------~~~ld~~-------~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~ 726 (824)
....... ........+..+.+++.+|++.+|.+||++.+.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~ 295 (343)
T cd07880 234 TPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEA 295 (343)
T ss_pred CCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHH
Confidence 0000000 000112334578999999999999999999443
No 355
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.3e-32 Score=320.26 Aligned_cols=198 Identities=21% Similarity=0.279 Sum_probs=152.0
Q ss_pred CCCCccceeeecCceEEEEEEECC---eEEEEEEec--------------C---CCCCCchhHHHHHHHHHhcCCCceee
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLLRH---MQVAIKMLH--------------P---HSLQGPSEFQQEIDILSKIRHPNLVT 523 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~~~---~~VAvK~l~--------------~---~~~~~~~~f~~Ei~iL~~l~HpnIv~ 523 (824)
.+|.+..+||+|+||+||++.++. ..+++|.+. . ........+.+|+.+|+.++||||++
T Consensus 148 ~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv~ 227 (501)
T PHA03210 148 AHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENILK 227 (501)
T ss_pred hccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcCc
Confidence 479999999999999999986542 112222110 0 01111245789999999999999999
Q ss_pred Eeccc--CCceEEEEEecCCCChhhhhhccCC--CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCC
Q 003384 524 LVGAC--PEVWTLVYEYLPNGSLEDRLSCKDN--SPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDAN 599 (824)
Q Consensus 524 L~g~~--~~~~~LV~Ey~~ggsL~~~L~~~~~--~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~ 599 (824)
+++++ .+..++|++++. ++|.+++..... ...........|+.||+.||.|||+ ++||||||||+||||+.+
T Consensus 228 l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~---~gIiHrDLKP~NILl~~~ 303 (501)
T PHA03210 228 IEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHD---KKLIHRDIKLENIFLNCD 303 (501)
T ss_pred EeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCC
Confidence 99988 456889999985 567776643211 1223355677899999999999999 899999999999999999
Q ss_pred CcceeeccccccccccccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCC-CCC
Q 003384 600 FVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP-ALG 672 (824)
Q Consensus 600 ~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~-Pf~ 672 (824)
+.+||+|||+++.+....... .....||+.|+|||++.+..++.++|||||||+||||++|.. ||.
T Consensus 304 ~~vkL~DFGla~~~~~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~ 370 (501)
T PHA03210 304 GKIVLGDFGTAMPFEKEREAF-------DYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIG 370 (501)
T ss_pred CCEEEEeCCCceecCcccccc-------cccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCcc
Confidence 999999999998764332111 123469999999999999999999999999999999999874 453
No 356
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=4.5e-32 Score=300.50 Aligned_cols=250 Identities=22% Similarity=0.298 Sum_probs=188.6
Q ss_pred cCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCCchhHHHHHHHHHhcCCCceeeEecccCC----------
Q 003384 463 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPE---------- 530 (824)
Q Consensus 463 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~~---------- 530 (824)
..+|...+.||.|+||.||+|... +..||+|.+........+.+.+|+++++.++||||+++++++..
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVG 83 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccc
Confidence 357899999999999999999875 57899999876655555678899999999999999999987632
Q ss_pred ------ceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEec-CCCcce
Q 003384 531 ------VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLD-ANFVSK 603 (824)
Q Consensus 531 ------~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld-~~~~vK 603 (824)
..++||||+. ++|.+++. ...+++..+..++.|++.||.|||+ .||+||||||+|||++ .++.+|
T Consensus 84 ~~~~~~~~~lv~e~~~-~~L~~~~~----~~~l~~~~~~~~~~qi~~aL~~LH~---~givH~dikp~Nili~~~~~~~k 155 (342)
T cd07854 84 SLTELNSVYIVQEYME-TDLANVLE----QGPLSEEHARLFMYQLLRGLKYIHS---ANVLHRDLKPANVFINTEDLVLK 155 (342)
T ss_pred cccccceEEEEeeccc-ccHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEcCCCceEE
Confidence 3689999997 58888773 2358899999999999999999999 8999999999999997 566889
Q ss_pred eeccccccccccccccCCCccccccCCCCCCcccCChhhhcc-CCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHh
Q 003384 604 LSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLAS-GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALD 682 (824)
Q Consensus 604 L~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~ 682 (824)
|+|||++..+........ ......|+..|+|||++.. ..++.++|||||||++|+|++|++||...........
T Consensus 156 l~dfg~~~~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~ 230 (342)
T cd07854 156 IGDFGLARIVDPHYSHKG-----YLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQL 230 (342)
T ss_pred ECCcccceecCCcccccc-----ccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 999999976532211110 0122357899999998755 4688899999999999999999999975443221111
Q ss_pred hhcc---------ccc--------c-CCCCCCC-----ChhhHHHHHHHHHHHhhhccCCCCChHH
Q 003384 683 TGKL---------KNL--------L-DPLAGDW-----PFVQAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 683 ~~~~---------~~~--------l-d~~~~~~-----p~~~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
.... ... . ....... ....+..+.+|+.+||+.+|.+||++.+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e 296 (342)
T cd07854 231 ILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEE 296 (342)
T ss_pred HHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHH
Confidence 0000 000 0 0000001 1123467889999999999999999843
No 357
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=4.4e-32 Score=298.05 Aligned_cols=249 Identities=25% Similarity=0.329 Sum_probs=192.1
Q ss_pred CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCC--CCCchhHHHHHHHHHhcCCCceeeEecccCC-------ceE
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS--LQGPSEFQQEIDILSKIRHPNLVTLVGACPE-------VWT 533 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~--~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~~-------~~~ 533 (824)
+|...+.||.|+||.||+|... +..||||.+.... ....+.+.+|+.+++.++||||+++++++.. ..+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 4777889999999999999875 5889999987643 2334578999999999999999999998732 478
Q ss_pred EEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccc
Q 003384 534 LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFL 613 (824)
Q Consensus 534 LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~ 613 (824)
+||||++ ++|.+++.. ..++++..+..++.+++.||.|||+ +||+||||||.|||++.++.++|+|||++...
T Consensus 81 lv~e~~~-~~l~~~l~~---~~~l~~~~~~~i~~~l~~~l~~LH~---~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~ 153 (330)
T cd07834 81 IVTELME-TDLHKVIKS---PQPLTDDHIQYFLYQILRGLKYLHS---ANVIHRDLKPSNILVNSNCDLKICDFGLARGV 153 (330)
T ss_pred EEecchh-hhHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEcccCceEee
Confidence 9999997 588888842 3479999999999999999999999 89999999999999999999999999999876
Q ss_pred ccccccCCCccccccCCCCCCcccCChhhhccC-CCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhc-------
Q 003384 614 SQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGK------- 685 (824)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~------- 685 (824)
....... .......||+.|+|||++.+. .++.++|||||||++|+|++|++||............-.
T Consensus 154 ~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~ 228 (330)
T cd07834 154 DPDEDEK-----GFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSE 228 (330)
T ss_pred ccccccc-----ccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCCh
Confidence 5432110 011334589999999999887 789999999999999999999999976543221110000
Q ss_pred ----------cccccCCCC-------CCCChhhHHHHHHHHHHHhhhccCCCCChHH
Q 003384 686 ----------LKNLLDPLA-------GDWPFVQAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 686 ----------~~~~ld~~~-------~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
....+.... .......+..+.+++.+||+.+|.+||++.+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ 285 (330)
T cd07834 229 EDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADE 285 (330)
T ss_pred hHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHH
Confidence 000000000 0001123567899999999999999999843
No 358
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=99.98 E-value=6.9e-33 Score=286.18 Aligned_cols=252 Identities=25% Similarity=0.355 Sum_probs=190.1
Q ss_pred CCCccceeeecCceEEEEEEECC------eEEEEEEecCCCCCC--chhHHHHHHHHHhcCCCceeeEecccC---CceE
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLRH------MQVAIKMLHPHSLQG--PSEFQQEIDILSKIRHPNLVTLVGACP---EVWT 533 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~~------~~VAvK~l~~~~~~~--~~~f~~Ei~iL~~l~HpnIv~L~g~~~---~~~~ 533 (824)
.|+....||+|.||.||++...+ ..+|||.++...... .....+|+.+++.|+||||+.|..+|- ...+
T Consensus 25 ~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v~ 104 (438)
T KOG0666|consen 25 EYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKVW 104 (438)
T ss_pred HhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceEE
Confidence 57888899999999999996532 368999998653322 235789999999999999999988873 3678
Q ss_pred EEEEecCCCChhhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCC----Ccceeecc
Q 003384 534 LVYEYLPNGSLEDRLSCK--DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDAN----FVSKLSDF 607 (824)
Q Consensus 534 LV~Ey~~ggsL~~~L~~~--~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~----~~vKL~DF 607 (824)
+++||.+. +|..++... .....++......|+.||+.|+.|||+ +-|+||||||+|||+..+ |.+||+||
T Consensus 105 l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~---NWvlHRDLKPaNIlvmgdgperG~VKIaDl 180 (438)
T KOG0666|consen 105 LLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHS---NWVLHRDLKPANILVMGDGPERGRVKIADL 180 (438)
T ss_pred EEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhh---hheeeccCCcceEEEeccCCccCeeEeecc
Confidence 99999986 787777543 233578889999999999999999999 889999999999999877 89999999
Q ss_pred ccccccccccccCCCccccccCCCCCCcccCChhhhccC-CCCcchhHHhHHHHHHHHHhCCCCCCCchH-------HHH
Q 003384 608 GISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLTGRPALGITKE-------VQY 679 (824)
Q Consensus 608 Gla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~-------~~~ 679 (824)
|+++.+...-... .....++-|++|.|||.+.+. .||++.|||+.|||+.||+|-.|.|.+... +..
T Consensus 181 GlaR~~~~plkpl-----~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~ 255 (438)
T KOG0666|consen 181 GLARLFNNPLKPL-----ASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQH 255 (438)
T ss_pred cHHHHhhcccccc-----ccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchH
Confidence 9999876543211 112345579999999999885 799999999999999999999998854321 111
Q ss_pred HHhhhccccccCCCCCCCChhh--------------------------------HHHHHHHHHHHhhhccCCCCChHH
Q 003384 680 ALDTGKLKNLLDPLAGDWPFVQ--------------------------------AEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 680 ~~~~~~~~~~ld~~~~~~p~~~--------------------------------~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
.-....+.-+..|...+||... ++...+|+..+|++||.+|.|..+
T Consensus 256 dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~q 333 (438)
T KOG0666|consen 256 DQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQ 333 (438)
T ss_pred HHHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHH
Confidence 1111112222223333333211 224678899999999999999844
No 359
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.98 E-value=8.6e-32 Score=296.74 Aligned_cols=248 Identities=24% Similarity=0.305 Sum_probs=190.1
Q ss_pred HhhhcCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC--CCchhHHHHHHHHHhcCCCceeeEecccC---Cc
Q 003384 459 IEGATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVGACP---EV 531 (824)
Q Consensus 459 i~~~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~--~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~---~~ 531 (824)
+...+++|...+.||.|+||.||+|... +..||||.+..... .....+..|+.+++.++||||++++++|. ..
T Consensus 5 ~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 84 (328)
T cd07856 5 VFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLED 84 (328)
T ss_pred eeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCc
Confidence 3446778999999999999999999865 57899998764321 22456889999999999999999999873 35
Q ss_pred eEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccc
Q 003384 532 WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISR 611 (824)
Q Consensus 532 ~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~ 611 (824)
.++||||+ +++|.+++. ..+++......++.+++.||.|||+ ++|+||||+|+|||++.++.+||+|||++.
T Consensus 85 ~~lv~e~~-~~~L~~~~~----~~~~~~~~~~~~~~ql~~aL~~LH~---~~iiH~dl~p~Nili~~~~~~~l~dfg~~~ 156 (328)
T cd07856 85 IYFVTELL-GTDLHRLLT----SRPLEKQFIQYFLYQILRGLKYVHS---AGVVHRDLKPSNILINENCDLKICDFGLAR 156 (328)
T ss_pred EEEEeehh-ccCHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEeECCCCCEEeCcccccc
Confidence 78999998 568988873 2357888888999999999999999 899999999999999999999999999987
Q ss_pred ccccccccCCCccccccCCCCCCcccCChhhhcc-CCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhh-------
Q 003384 612 FLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLAS-GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDT------- 683 (824)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~------- 683 (824)
...... ....++..|+|||++.+ ..++.++|||||||++|+|+||++||............
T Consensus 157 ~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~ 225 (328)
T cd07856 157 IQDPQM-----------TGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTP 225 (328)
T ss_pred ccCCCc-----------CCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC
Confidence 532211 22357889999998766 56899999999999999999999999754432111000
Q ss_pred ----------hccccccCCC--CCCCC-----hhhHHHHHHHHHHHhhhccCCCCChHH
Q 003384 684 ----------GKLKNLLDPL--AGDWP-----FVQAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 684 ----------~~~~~~ld~~--~~~~p-----~~~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
+.....+... ....| ...+..+.+++.+||+.+|.+||++.+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~e 284 (328)
T cd07856 226 PDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAE 284 (328)
T ss_pred CHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHH
Confidence 0000000000 00111 123568999999999999999999843
No 360
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.98 E-value=1.2e-31 Score=292.54 Aligned_cols=237 Identities=28% Similarity=0.389 Sum_probs=185.9
Q ss_pred CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCC---CchhHHHHHHHHHhcCCCceeeEeccc--CCceEEEEE
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ---GPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYE 537 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~---~~~~f~~Ei~iL~~l~HpnIv~L~g~~--~~~~~LV~E 537 (824)
.|...+.||.|+||.||+|... +..||+|.+...... ....+.+|+.+++.++|||++++++++ ....++|||
T Consensus 16 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 95 (308)
T cd06634 16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME 95 (308)
T ss_pred HHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEE
Confidence 4667788999999999999875 578999988643222 234577899999999999999999987 446789999
Q ss_pred ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccccc
Q 003384 538 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNE 617 (824)
Q Consensus 538 y~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~ 617 (824)
|+. |+|.+.+... ..++++..+..++.+++.||.|||+ .+++||||+|+|||++.++.+||+|||++......
T Consensus 96 ~~~-~~l~~~~~~~--~~~l~~~~~~~~~~~l~~~l~~LH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~- 168 (308)
T cd06634 96 YCL-GSASDLLEVH--KKPLQEVEIAAVTHGALQGLAYLHS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA- 168 (308)
T ss_pred ccC-CCHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHhEEECCCCcEEECCcccceeecCc-
Confidence 996 5787776422 3458899999999999999999999 89999999999999999999999999998764321
Q ss_pred ccCCCccccccCCCCCCcccCChhhhc---cCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHH--HhhhccccccCC
Q 003384 618 ISSNNTTLCCRTDPKGTFAYMDPEFLA---SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYA--LDTGKLKNLLDP 692 (824)
Q Consensus 618 ~~~~~~~~~~~~~~~GT~~Y~APE~l~---~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~--~~~~~~~~~ld~ 692 (824)
....|++.|+|||.+. ...++.++|||||||++|+|++|.+||......... ...+.. +
T Consensus 169 -----------~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~-----~ 232 (308)
T cd06634 169 -----------NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNES-----P 232 (308)
T ss_pred -----------ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhcCC-----C
Confidence 2235789999999975 346788999999999999999999998654332211 111111 1
Q ss_pred CCCCCChhhHHHHHHHHHHHhhhccCCCCChHHHH
Q 003384 693 LAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDV 727 (824)
Q Consensus 693 ~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v 727 (824)
. ..+...+..+.+|+.+||..+|.+||++ +++
T Consensus 233 ~--~~~~~~~~~~~~li~~cl~~~P~~Rp~~-~~l 264 (308)
T cd06634 233 A--LQSGHWSEYFRNFVDSCLQKIPQDRPTS-EVL 264 (308)
T ss_pred C--cCcccccHHHHHHHHHHhhCCcccCCCH-HHH
Confidence 0 0122345679999999999999999998 444
No 361
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.98 E-value=1.3e-31 Score=295.29 Aligned_cols=254 Identities=22% Similarity=0.280 Sum_probs=187.0
Q ss_pred CCC-ccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCC--------------chhHHHHHHHHHhcCCCceeeEecc
Q 003384 465 NFD-PSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG--------------PSEFQQEIDILSKIRHPNLVTLVGA 527 (824)
Q Consensus 465 ~f~-~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~--------------~~~f~~Ei~iL~~l~HpnIv~L~g~ 527 (824)
+|. ....||.|+||.||+|... +..||||.+....... ...+.+|+.+++.++||||++++++
T Consensus 9 ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~ 88 (335)
T PTZ00024 9 RYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDV 88 (335)
T ss_pred chhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEE
Confidence 454 3467999999999999865 5789999986543221 1247789999999999999999998
Q ss_pred c--CCceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceee
Q 003384 528 C--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLS 605 (824)
Q Consensus 528 ~--~~~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~ 605 (824)
+ .+..++||||+. |+|.+++. ....+++.....++.|++.||.|||. ++|+||||+|+|||++.++.+||+
T Consensus 89 ~~~~~~~~lv~e~~~-~~l~~~l~---~~~~~~~~~~~~~~~ql~~aL~~LH~---~~i~H~dl~~~nill~~~~~~kl~ 161 (335)
T PTZ00024 89 YVEGDFINLVMDIMA-SDLKKVVD---RKIRLTESQVKCILLQILNGLNVLHK---WYFMHRDLSPANIFINSKGICKIA 161 (335)
T ss_pred EecCCcEEEEEeccc-cCHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHh---CCeecccccHHHeEECCCCCEEEC
Confidence 7 456889999996 68988884 33468899999999999999999999 899999999999999999999999
Q ss_pred ccccccccccccccCC-----C-ccccccCCCCCCcccCChhhhccC-CCCcchhHHhHHHHHHHHHhCCCCCCCchHHH
Q 003384 606 DFGISRFLSQNEISSN-----N-TTLCCRTDPKGTFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLTGRPALGITKEVQ 678 (824)
Q Consensus 606 DFGla~~~~~~~~~~~-----~-~~~~~~~~~~GT~~Y~APE~l~~~-~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~ 678 (824)
|||++........... . ..........+++.|+|||++.+. .++.++|||||||++|+|+||.+||...+...
T Consensus 162 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~ 241 (335)
T PTZ00024 162 DFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEID 241 (335)
T ss_pred CccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 9999986642211100 0 000011234578899999998764 47899999999999999999999997655432
Q ss_pred HHHhhhc---------ccccc-----CCCCC-------CCChhhHHHHHHHHHHHhhhccCCCCChHH
Q 003384 679 YALDTGK---------LKNLL-----DPLAG-------DWPFVQAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 679 ~~~~~~~---------~~~~l-----d~~~~-------~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
....... +.... .+... ......+..+.+++.+||+.+|.+||++.+
T Consensus 242 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~ 309 (335)
T PTZ00024 242 QLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKE 309 (335)
T ss_pred HHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHH
Confidence 1111000 00000 00000 001123567899999999999999999843
No 362
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.98 E-value=1.3e-31 Score=295.42 Aligned_cols=250 Identities=23% Similarity=0.266 Sum_probs=186.0
Q ss_pred CCCccceeeecCceEEEEEEEC----CeEEEEEEecCCCCC--CchhHHHHHHHHHhc-CCCceeeEecccC------Cc
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR----HMQVAIKMLHPHSLQ--GPSEFQQEIDILSKI-RHPNLVTLVGACP------EV 531 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~----~~~VAvK~l~~~~~~--~~~~f~~Ei~iL~~l-~HpnIv~L~g~~~------~~ 531 (824)
+|...+.||+|+||.||++... +..||||.+...... ....+.+|+.+++++ +||||+++++.+. ..
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 4677889999999999999876 457999988643211 234678899999999 5999999998641 24
Q ss_pred eEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccc
Q 003384 532 WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISR 611 (824)
Q Consensus 532 ~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~ 611 (824)
.+++++|+. ++|.+.+. ....+++..+..++.|++.||.|||. +||+||||||+|||++.++.+||+|||+++
T Consensus 81 ~~~~~e~~~-~~L~~~l~---~~~~~~~~~~~~~~~qi~~aL~~LH~---~givH~dlkp~Nili~~~~~~kl~Dfg~a~ 153 (332)
T cd07857 81 LYLYEELME-ADLHQIIR---SGQPLTDAHFQSFIYQILCGLKYIHS---ANVLHRDLKPGNLLVNADCELKICDFGLAR 153 (332)
T ss_pred EEEEEeccc-CCHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHeEEcCCCCEEeCcCCCce
Confidence 678888885 68988884 34568999999999999999999999 899999999999999999999999999998
Q ss_pred ccccccccCCCccccccCCCCCCcccCChhhhcc-CCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHh--------
Q 003384 612 FLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLAS-GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALD-------- 682 (824)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~-------- 682 (824)
.+........ .......||+.|+|||++.+ ..++.++|||||||++|+|++|.+||...+.......
T Consensus 154 ~~~~~~~~~~----~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 229 (332)
T cd07857 154 GFSENPGENA----GFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTP 229 (332)
T ss_pred eccccccccc----ccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCC
Confidence 6653322111 01133468999999998766 4689999999999999999999999975432110000
Q ss_pred ---------hhc---cccccC----CCCCCCChhhHHHHHHHHHHHhhhccCCCCChHH
Q 003384 683 ---------TGK---LKNLLD----PLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 683 ---------~~~---~~~~ld----~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
... ....+. ..........+..+.+++.+|++.+|.+||++.+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ 288 (332)
T cd07857 230 DEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEE 288 (332)
T ss_pred CHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHH
Confidence 000 000000 0000001123567999999999999999999844
No 363
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.98 E-value=1.1e-31 Score=286.70 Aligned_cols=246 Identities=28% Similarity=0.400 Sum_probs=190.2
Q ss_pred CCccceeeecCceEEEEEEEC--CeEEEEEEecCCC--CCCchhHHHHHHHHHhcCCCceeeEecccC--CceEEEEEec
Q 003384 466 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS--LQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYL 539 (824)
Q Consensus 466 f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~--~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~Ey~ 539 (824)
|+....||.|+||.||+|... +..||+|++.... ......+..|+.+++.++||||+++++++. +..++||||+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC 80 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence 455678999999999999886 5889999988653 223456889999999999999999999874 4688999999
Q ss_pred CCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccccccc
Q 003384 540 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEIS 619 (824)
Q Consensus 540 ~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~ 619 (824)
+ ++|.+++.... ..+++..+..++.+++.||.|||. ++|+||||+|+||+++.++.+||+|||++.........
T Consensus 81 ~-~~l~~~i~~~~--~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~ 154 (282)
T cd07829 81 D-MDLKKYLDKRP--GPLSPNLIKSIMYQLLRGLAYCHS---HRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRT 154 (282)
T ss_pred C-cCHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChheEEEcCCCCEEEecCCcccccCCCccc
Confidence 7 58999985332 468999999999999999999999 89999999999999999999999999999865432211
Q ss_pred CCCccccccCCCCCCcccCChhhhccC-CCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhc---------c---
Q 003384 620 SNNTTLCCRTDPKGTFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGK---------L--- 686 (824)
Q Consensus 620 ~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~---------~--- 686 (824)
.....++..|+|||++.+. .++.++|||||||++|||++|++||.............. +
T Consensus 155 --------~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (282)
T cd07829 155 --------YTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGV 226 (282)
T ss_pred --------cCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhh
Confidence 1223467889999998776 789999999999999999999999976554322111000 0
Q ss_pred ccc--cCCCCCCC--------ChhhHHHHHHHHHHHhhhccCCCCChHH
Q 003384 687 KNL--LDPLAGDW--------PFVQAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 687 ~~~--ld~~~~~~--------p~~~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
..+ .+.....+ ....+..+.+++.+||..+|.+||++.+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ 275 (282)
T cd07829 227 TKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKE 275 (282)
T ss_pred cccccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHH
Confidence 000 00000000 0112568999999999999999999843
No 364
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=99.98 E-value=1.6e-32 Score=279.31 Aligned_cols=238 Identities=25% Similarity=0.368 Sum_probs=181.8
Q ss_pred cceeeecCceEEEEEEECC--eEEEEEEecCCCC-CCchhHHHHHHHHHhcC-CCceeeEecccC--CceEEEEEecCCC
Q 003384 469 SLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSL-QGPSEFQQEIDILSKIR-HPNLVTLVGACP--EVWTLVYEYLPNG 542 (824)
Q Consensus 469 ~~~LG~G~fG~Vykg~~~~--~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l~-HpnIv~L~g~~~--~~~~LV~Ey~~gg 542 (824)
...||.|..|.|++.+++. .-.|||.+..... ...+++...++++.+.+ .|+||+.+|+|- ....+.||.|. .
T Consensus 97 l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelMs-~ 175 (391)
T KOG0983|consen 97 LGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELMS-T 175 (391)
T ss_pred HHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHHH-H
Confidence 3459999999999999875 7899999876543 23456788888877765 899999999983 34567788873 3
Q ss_pred ChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccccCCC
Q 003384 543 SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNN 622 (824)
Q Consensus 543 sL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~~~~ 622 (824)
-++.+|.. -..++++...-++..-+..||.||..- ++|||||+||+|||+|..|.+||||||++..+......
T Consensus 176 C~ekLlkr--ik~piPE~ilGk~tva~v~AL~YLKeK--H~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkAh--- 248 (391)
T KOG0983|consen 176 CAEKLLKR--IKGPIPERILGKMTVAIVKALYYLKEK--HGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKAH--- 248 (391)
T ss_pred HHHHHHHH--hcCCchHHhhhhhHHHHHHHHHHHHHh--cceeecccCccceEEccCCCEEeecccccceeeccccc---
Confidence 45555532 245688888889999999999999885 57999999999999999999999999999877654321
Q ss_pred ccccccCCCCCCcccCChhhhcc---CCCCcchhHHhHHHHHHHHHhCCCCCCCch-HHHHHHhhhccccccCCCCCCCC
Q 003384 623 TTLCCRTDPKGTFAYMDPEFLAS---GELTPKSDVYSFGIILLRLLTGRPALGITK-EVQYALDTGKLKNLLDPLAGDWP 698 (824)
Q Consensus 623 ~~~~~~~~~~GT~~Y~APE~l~~---~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~-~~~~~~~~~~~~~~ld~~~~~~p 698 (824)
+...|.+.|||||.+.. ..|+..+||||||+.|+||.||+.||.+.+ ++.. ....+.+ ..|.. +.-
T Consensus 249 ------trsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~--ltkvln~-ePP~L-~~~ 318 (391)
T KOG0983|consen 249 ------TRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEV--LTKVLNE-EPPLL-PGH 318 (391)
T ss_pred ------ccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHH--HHHHHhc-CCCCC-Ccc
Confidence 34569999999999864 368999999999999999999999997632 2221 1111111 11111 111
Q ss_pred hhhHHHHHHHHHHHhhhccCCCCChH
Q 003384 699 FVQAEQLANLAMRCCEMSRKSRPELG 724 (824)
Q Consensus 699 ~~~~~~l~~Li~~Cl~~~P~~RPt~~ 724 (824)
..-+..+.+++..||..|+.+||.+.
T Consensus 319 ~gFSp~F~~fv~~CL~kd~r~RP~Y~ 344 (391)
T KOG0983|consen 319 MGFSPDFQSFVKDCLTKDHRKRPKYN 344 (391)
T ss_pred cCcCHHHHHHHHHHhhcCcccCcchH
Confidence 12467999999999999999999984
No 365
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.98 E-value=3.1e-31 Score=290.08 Aligned_cols=237 Identities=27% Similarity=0.373 Sum_probs=184.5
Q ss_pred CCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCC---chhHHHHHHHHHhcCCCceeeEecccC--CceEEEEEe
Q 003384 466 FDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG---PSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEY 538 (824)
Q Consensus 466 f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~---~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~Ey 538 (824)
|.....||+|+||.||+|... +..|++|.+....... ...+.+|+.+++.++|||++++++++. +..++||||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 555677999999999999874 5789999986543322 245788999999999999999999884 468899999
Q ss_pred cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccc
Q 003384 539 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEI 618 (824)
Q Consensus 539 ~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~ 618 (824)
+. |+|.+++... ..++++..+..++.+++.||.|||. +|++||||+|+||+++.++.+||+|||++......
T Consensus 103 ~~-~~l~~~l~~~--~~~l~~~~~~~~~~qi~~al~~LH~---~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~~-- 174 (313)
T cd06633 103 CL-GSASDLLEVH--KKPLQEVEIAAITHGALQGLAYLHS---HNMIHRDIKAGNILLTEPGQVKLADFGSASKSSPA-- 174 (313)
T ss_pred CC-CCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCChhhEEECCCCCEEEeecCCCcccCCC--
Confidence 96 5777777432 3468999999999999999999999 89999999999999999999999999987532211
Q ss_pred cCCCccccccCCCCCCcccCChhhhc---cCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCC
Q 003384 619 SSNNTTLCCRTDPKGTFAYMDPEFLA---SGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAG 695 (824)
Q Consensus 619 ~~~~~~~~~~~~~~GT~~Y~APE~l~---~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~ 695 (824)
....|+..|+|||++. .+.++.++|||||||++|+|++|.+||............... . . +..
T Consensus 175 ----------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~-~-~-~~~- 240 (313)
T cd06633 175 ----------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN-D-S-PTL- 240 (313)
T ss_pred ----------CCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc-C-C-CCC-
Confidence 2345899999999984 356888999999999999999999999655433222111110 0 0 100
Q ss_pred CCChhhHHHHHHHHHHHhhhccCCCCChHH
Q 003384 696 DWPFVQAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 696 ~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
.....+..+.+|+.+||+.+|.+||++.+
T Consensus 241 -~~~~~~~~l~~li~~~l~~~P~~Rp~~~~ 269 (313)
T cd06633 241 -QSNEWTDSFRGFVDYCLQKIPQERPASAE 269 (313)
T ss_pred -CccccCHHHHHHHHHHccCChhhCcCHHH
Confidence 11123457899999999999999999943
No 366
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.98 E-value=1.3e-31 Score=281.01 Aligned_cols=232 Identities=30% Similarity=0.385 Sum_probs=189.4
Q ss_pred eeecCceEEEEEEEC--CeEEEEEEecCCCCC---CchhHHHHHHHHHhcCCCceeeEecccC--CceEEEEEecCCCCh
Q 003384 472 IGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ---GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYLPNGSL 544 (824)
Q Consensus 472 LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~---~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~Ey~~ggsL 544 (824)
||.|+||.||++... +..||+|++...... ....+..|+.+++.++||||+++++.+. ...++||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 699999999999886 588999998765432 2347889999999999999999999874 467899999999999
Q ss_pred hhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccccCCCcc
Q 003384 545 EDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTT 624 (824)
Q Consensus 545 ~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~~~~~~ 624 (824)
.+++.. ...+++..+..++.+++.||.|||. .+++|+||+|+||+++.++.++|+|||++........
T Consensus 81 ~~~l~~---~~~l~~~~~~~~~~qi~~~l~~lh~---~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~------ 148 (250)
T cd05123 81 FSHLSK---EGRFSEERARFYAAEIVLALEYLHS---LGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGS------ 148 (250)
T ss_pred HHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCcceEEEcCCCcEEEeecCcceecccCCC------
Confidence 999853 3368999999999999999999999 8899999999999999999999999999876543310
Q ss_pred ccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCCCCChhhHHH
Q 003384 625 LCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQ 704 (824)
Q Consensus 625 ~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~ 704 (824)
......|+..|++||.+.+..++.++|+||||+++|+|++|+.||......... .. ... .....+...+..
T Consensus 149 --~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~-~~--~~~----~~~~~~~~~~~~ 219 (250)
T cd05123 149 --RTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIY-EK--ILK----DPLRFPEFLSPE 219 (250)
T ss_pred --cccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHH-HH--Hhc----CCCCCCCCCCHH
Confidence 013345899999999998888899999999999999999999999765432111 11 000 112334445678
Q ss_pred HHHHHHHHhhhccCCCCChH
Q 003384 705 LANLAMRCCEMSRKSRPELG 724 (824)
Q Consensus 705 l~~Li~~Cl~~~P~~RPt~~ 724 (824)
+.+++.+||..+|.+||++.
T Consensus 220 l~~~i~~~l~~~p~~R~~~~ 239 (250)
T cd05123 220 ARDLISGLLQKDPTKRLGSG 239 (250)
T ss_pred HHHHHHHHhcCCHhhCCCcc
Confidence 99999999999999999984
No 367
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=99.97 E-value=3.6e-32 Score=320.76 Aligned_cols=255 Identities=26% Similarity=0.384 Sum_probs=185.8
Q ss_pred cCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCC-CCCchhHHHHHHHHHhcCCCceeeEeccc-----------
Q 003384 463 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS-LQGPSEFQQEIDILSKIRHPNLVTLVGAC----------- 528 (824)
Q Consensus 463 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~-~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~----------- 528 (824)
..+|+....||+||||.||+++.+ |..||||++.... ...-..+.+|+.+|++|+|||||++|.++
T Consensus 478 ~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~e 557 (1351)
T KOG1035|consen 478 LNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVLE 557 (1351)
T ss_pred hhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccccc
Confidence 346888889999999999999764 8999999987653 22235688999999999999999986432
Q ss_pred -----------C--------------------------------------------------------------------
Q 003384 529 -----------P-------------------------------------------------------------------- 529 (824)
Q Consensus 529 -----------~-------------------------------------------------------------------- 529 (824)
.
T Consensus 558 i~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~e 637 (1351)
T KOG1035|consen 558 IVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDSE 637 (1351)
T ss_pred ccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccccC
Confidence 0
Q ss_pred -------------------------------CceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhh
Q 003384 530 -------------------------------EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHS 578 (824)
Q Consensus 530 -------------------------------~~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~ 578 (824)
-..||=||||+..+|.+++..+... -.....++++.+|++||.|+|+
T Consensus 638 ~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~--~~~d~~wrLFreIlEGLaYIH~ 715 (1351)
T KOG1035|consen 638 GSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFN--SQRDEAWRLFREILEGLAYIHD 715 (1351)
T ss_pred CccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccc--hhhHHHHHHHHHHHHHHHHHHh
Confidence 0024567788777777776432111 0345678999999999999999
Q ss_pred cCCCceEeccccCCcEEecCCCcceeeccccccccc------ccccc----CCCccccccCCCCCCcccCChhhhccC--
Q 003384 579 CKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLS------QNEIS----SNNTTLCCRTDPKGTFAYMDPEFLASG-- 646 (824)
Q Consensus 579 ~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~------~~~~~----~~~~~~~~~~~~~GT~~Y~APE~l~~~-- 646 (824)
+|||||||||.||+||++..|||+|||+|+... ..... .........++.+||.-|+|||++.+.
T Consensus 716 ---~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~ 792 (1351)
T KOG1035|consen 716 ---QGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSS 792 (1351)
T ss_pred ---CceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhccccc
Confidence 899999999999999999999999999998722 00000 011111123677999999999999765
Q ss_pred -CCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCCCCChhhHHHHHHHHHHHhhhccCCCCChHH
Q 003384 647 -ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 647 -~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
.|+.|+|+|||||||+||+. ||+...+-...+ ..+...--|...++.......-+.+|.++++.||.+|||+.+
T Consensus 793 ~~Yn~KiDmYSLGIVlFEM~y---PF~TsMERa~iL--~~LR~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~e 867 (1351)
T KOG1035|consen 793 NKYNSKIDMYSLGIVLFEMLY---PFGTSMERASIL--TNLRKGSIPEPADFFDPEHPEEASLIRWLLSHDPSKRPTATE 867 (1351)
T ss_pred ccccchhhhHHHHHHHHHHhc---cCCchHHHHHHH--HhcccCCCCCCcccccccchHHHHHHHHHhcCCCccCCCHHH
Confidence 49999999999999999986 475443322211 112221112223445556667889999999999999999955
Q ss_pred HH
Q 003384 726 DV 727 (824)
Q Consensus 726 ~v 727 (824)
.+
T Consensus 868 LL 869 (1351)
T KOG1035|consen 868 LL 869 (1351)
T ss_pred Hh
Confidence 44
No 368
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.97 E-value=4.7e-32 Score=303.13 Aligned_cols=244 Identities=25% Similarity=0.385 Sum_probs=199.1
Q ss_pred hhcCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCCc--hhHHHHHHHHHhcCCCceeeEeccc--CCceEE
Q 003384 461 GATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGP--SEFQQEIDILSKIRHPNLVTLVGAC--PEVWTL 534 (824)
Q Consensus 461 ~~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~--~~f~~Ei~iL~~l~HpnIv~L~g~~--~~~~~L 534 (824)
.....|.+...||+|.|++|..|+.. +..||||++........ ..+.+|+++|+.|+|||||+|+.+. +...|+
T Consensus 53 ~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lyl 132 (596)
T KOG0586|consen 53 NSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYL 132 (596)
T ss_pred ccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEE
Confidence 34567999999999999999999765 68999999987654432 4588999999999999999999986 567999
Q ss_pred EEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccc
Q 003384 535 VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLS 614 (824)
Q Consensus 535 V~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~ 614 (824)
||||+.+|.++++|.... .+.......++.|+..|++|||+ ++|||||||.+||||+.+..+||+|||++.++.
T Consensus 133 V~eya~~ge~~~yl~~~g---r~~e~~ar~~F~q~vsaveYcH~---k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~ 206 (596)
T KOG0586|consen 133 VMEYASGGELFDYLVKHG---RMKEKEARAKFRQIVSAVEYCHS---KNIVHRDLKAENILLDENMNIKIADFGFSTFFD 206 (596)
T ss_pred EEEeccCchhHHHHHhcc---cchhhhhhhhhHHHHHHHHHHhh---cceeccccchhhcccccccceeeeccccceeec
Confidence 999999999999996443 34557888899999999999999 899999999999999999999999999999886
Q ss_pred cccccCCCccccccCCCCCCcccCChhhhccCCC-CcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCC
Q 003384 615 QNEISSNNTTLCCRTDPKGTFAYMDPEFLASGEL-TPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPL 693 (824)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~-t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~ 693 (824)
..... .+..|++.|.|||++.+..| ++.+|+||+|++||-|+.|..||++..-.. +....+..
T Consensus 207 ~~~~l---------qt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~--Lr~rvl~g----- 270 (596)
T KOG0586|consen 207 YGLML---------QTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKE--LRPRVLRG----- 270 (596)
T ss_pred ccccc---------cccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCccccc--ccchheee-----
Confidence 44321 34469999999999999876 578999999999999999999998653211 11111100
Q ss_pred CCCCChhhHHHHHHHHHHHhhhccCCCCChHHH
Q 003384 694 AGDWPFVQAEQLANLAMRCCEMSRKSRPELGKD 726 (824)
Q Consensus 694 ~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~ 726 (824)
.-..|.....+..+++++++-.+|.+|+++.+.
T Consensus 271 k~rIp~~ms~dce~lLrk~lvl~Pskr~~~dqi 303 (596)
T KOG0586|consen 271 KYRIPFYMSCDCEDLLRKFLVLNPSKRGPCDQI 303 (596)
T ss_pred eecccceeechhHHHHHHhhccCccccCCHHHh
Confidence 112344556688999999999999999998443
No 369
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=1.1e-31 Score=304.43 Aligned_cols=251 Identities=25% Similarity=0.429 Sum_probs=205.0
Q ss_pred CCccceeeecCceEEEEEEEC------CeEEEEEEecCCCC-CCchhHHHHHHHHHhcCCCceeeEecccC-CceEEEEE
Q 003384 466 FDPSLKIGEGGYGSIYKGLLR------HMQVAIKMLHPHSL-QGPSEFQQEIDILSKIRHPNLVTLVGACP-EVWTLVYE 537 (824)
Q Consensus 466 f~~~~~LG~G~fG~Vykg~~~------~~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~-~~~~LV~E 537 (824)
....++||.|+||+||+|.|- +-+||||++..... ....+|..|+-+|..++|||+++|+|+|. ....||.+
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~~qlvtq 777 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLSTLQLVTQ 777 (1177)
T ss_pred hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccchHHHHHH
Confidence 344678999999999999873 25799999876433 33567999999999999999999999995 45779999
Q ss_pred ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccccc
Q 003384 538 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNE 617 (824)
Q Consensus 538 y~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~ 617 (824)
|+++|+|.|++.. .+.++..+..+.|..|||+|+.|||. +.++||||-..|||+..-.++||.|||+++++..+.
T Consensus 778 ~mP~G~LlDyvr~--hr~~igsq~lLnw~~QIAkgM~YLe~---qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~ 852 (1177)
T KOG1025|consen 778 LMPLGCLLDYVRE--HRDNIGSQDLLNWCYQIAKGMKYLEE---QRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDE 852 (1177)
T ss_pred hcccchHHHHHHH--hhccccHHHHHHHHHHHHHHHHHHHh---cchhhhhhhhhheeecCCCeEEEEecchhhccCccc
Confidence 9999999999964 45678889999999999999999998 899999999999999999999999999999887665
Q ss_pred ccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHh-CCCCCCCchH--HHHHHhhhccccccCCCC
Q 003384 618 ISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKE--VQYALDTGKLKNLLDPLA 694 (824)
Q Consensus 618 ~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELlt-G~~Pf~~~~~--~~~~~~~~~~~~~ld~~~ 694 (824)
..-.. ....-.+-|||=|.+....|+.++|||||||++||++| |..|+.+... +...++.| ..
T Consensus 853 ~ey~~------~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle~g--------eR 918 (1177)
T KOG1025|consen 853 KEYSA------PGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLEKG--------ER 918 (1177)
T ss_pred ccccc------cccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHhcc--------cc
Confidence 33211 22234678999999999999999999999999999998 8888865432 22222222 22
Q ss_pred CCCChhhHHHHHHHHHHHhhhccCCCCChHHHHHHHHHHHHh
Q 003384 695 GDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRA 736 (824)
Q Consensus 695 ~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le~l~~ 736 (824)
...|...+.++..++.+||..++..||++ +++...+..+..
T Consensus 919 LsqPpiCtiDVy~~mvkCwmid~~~rp~f-kel~~~fs~~ar 959 (1177)
T KOG1025|consen 919 LSQPPICTIDVYMVMVKCWMIDADSRPTF-KELAEEFSRMAR 959 (1177)
T ss_pred CCCCCCccHHHHHHHHHHhccCcccCccH-HHHHHHHHHHhc
Confidence 45678888999999999999999999999 566666655543
No 370
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.97 E-value=1.3e-31 Score=297.06 Aligned_cols=245 Identities=22% Similarity=0.309 Sum_probs=188.9
Q ss_pred hcCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCC--CCCchhHHHHHHHHHhcCCCceeeEecccC--C-----
Q 003384 462 ATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHS--LQGPSEFQQEIDILSKIRHPNLVTLVGACP--E----- 530 (824)
Q Consensus 462 ~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~--~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~----- 530 (824)
..++|.....||.|+||.||+|... +..||||++.... ......+.+|+.+++.++||||+++++++. +
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF 92 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence 4567999999999999999999885 5789999986532 122345778999999999999999998763 2
Q ss_pred -ceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccc
Q 003384 531 -VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGI 609 (824)
Q Consensus 531 -~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGl 609 (824)
..++|+||+ +++|.+++.. .++++..+..++.+++.||.|||+ +||+||||||+||+++.++.+||+|||+
T Consensus 93 ~~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~~~~ql~~aL~~LH~---~gi~H~dlkp~Nill~~~~~~kL~dfg~ 164 (343)
T cd07851 93 QDVYLVTHLM-GADLNNIVKC----QKLSDDHIQFLVYQILRGLKYIHS---AGIIHRDLKPSNIAVNEDCELKILDFGL 164 (343)
T ss_pred ccEEEEEecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCCEEEccccc
Confidence 278999998 6799998842 468999999999999999999999 8999999999999999999999999999
Q ss_pred ccccccccccCCCccccccCCCCCCcccCChhhhccC-CCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhcccc
Q 003384 610 SRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKN 688 (824)
Q Consensus 610 a~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~ 688 (824)
+....... ....++..|+|||.+.+. .++.++|||||||++|+|+||++||.................
T Consensus 165 ~~~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~ 233 (343)
T cd07851 165 ARHTDDEM-----------TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVG 233 (343)
T ss_pred cccccccc-----------cCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcC
Confidence 87653221 223578899999998653 678899999999999999999999975543221111000000
Q ss_pred -----------------ccCCC----CCC---CChhhHHHHHHHHHHHhhhccCCCCChHH
Q 003384 689 -----------------LLDPL----AGD---WPFVQAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 689 -----------------~ld~~----~~~---~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
.+... ... .....+..+.+++.+||+.+|.+||++.+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~e 294 (343)
T cd07851 234 TPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAE 294 (343)
T ss_pred CCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHH
Confidence 00000 000 01123568999999999999999999843
No 371
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=1.5e-31 Score=290.08 Aligned_cols=257 Identities=27% Similarity=0.419 Sum_probs=197.3
Q ss_pred CCCccceeeecCceEEEEEEECCeEEEEEEecCCCCCCchhHHHHHHHHHhc--CCCceeeEecccC------CceEEEE
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKI--RHPNLVTLVGACP------EVWTLVY 536 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l--~HpnIv~L~g~~~------~~~~LV~ 536 (824)
......+||+|.||.||||.+.++.||||++... ....|.+|.+|.+.. .|+||++++++-. ..+.||+
T Consensus 211 pl~l~eli~~Grfg~V~KaqL~~~~VAVKifp~~---~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt 287 (534)
T KOG3653|consen 211 PLQLLELIGRGRFGCVWKAQLDNRLVAVKIFPEQ---EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVT 287 (534)
T ss_pred chhhHHHhhcCccceeehhhccCceeEEEecCHH---HHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEe
Confidence 4456678999999999999999999999999754 345799999998875 7999999999752 2578999
Q ss_pred EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcC------CCceEeccccCCcEEecCCCcceeeccccc
Q 003384 537 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK------PHSIVHGDLKPANILLDANFVSKLSDFGIS 610 (824)
Q Consensus 537 Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~------~~giiHrDLKp~NILld~~~~vKL~DFGla 610 (824)
+|-+.|+|.++|. ...++|....+|+..+++||+|||.-. ..+|+|||||+.||||.++++.-|+|||||
T Consensus 288 ~fh~kGsL~dyL~----~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLA 363 (534)
T KOG3653|consen 288 EFHPKGSLCDYLK----ANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLA 363 (534)
T ss_pred eeccCCcHHHHHH----hccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeecccee
Confidence 9999999999994 345899999999999999999999733 357999999999999999999999999999
Q ss_pred cccccccccCCCccccccCCCCCCcccCChhhhccC-CCC-----cchhHHhHHHHHHHHHhCCCCC--CCc--------
Q 003384 611 RFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG-ELT-----PKSDVYSFGIILLRLLTGRPAL--GIT-------- 674 (824)
Q Consensus 611 ~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~t-----~ksDVwSlGvvL~ELltG~~Pf--~~~-------- 674 (824)
..+........ . .+.+||.+|||||++.+. .+. .+.||||+|.|||||+++-.-+ +..
T Consensus 364 l~~~p~~~~~d--~----~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe 437 (534)
T KOG3653|consen 364 LRLEPGKPQGD--T----HGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFE 437 (534)
T ss_pred EEecCCCCCcc--h----hhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchh
Confidence 98874432211 1 336899999999999764 232 3689999999999999865433 111
Q ss_pred ---------hHHHHHHhhhccccccCCCCCCCCh-hhHHHHHHHHHHHhhhccCCCCChHHHHHHHHHHHHhhC
Q 003384 675 ---------KEVQYALDTGKLKNLLDPLAGDWPF-VQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRASC 738 (824)
Q Consensus 675 ---------~~~~~~~~~~~~~~~ld~~~~~~p~-~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le~l~~~~ 738 (824)
+.++..+...+.... +...|.. ....-+.+.+..||+.|++-|-|. .-|.+++..+....
T Consensus 438 ~evG~hPt~e~mq~~VV~kK~RP~---~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA-~Cv~eR~~~l~~~~ 507 (534)
T KOG3653|consen 438 AEVGNHPTLEEMQELVVRKKQRPK---IPDAWRKHAGMAVLCETIEECWDHDAEARLTA-GCVEERMAELMMLW 507 (534)
T ss_pred HHhcCCCCHHHHHHHHHhhccCCC---ChhhhhcCccHHHHHHHHHHHcCCchhhhhhh-HHHHHHHHHHhccC
Confidence 111111111111111 1122221 235578999999999999999998 88888888876654
No 372
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=9.2e-33 Score=299.90 Aligned_cols=238 Identities=21% Similarity=0.297 Sum_probs=198.6
Q ss_pred CCccceeeecCceEEEEEEECCeE--EEEEEecCCCC---CCchhHHHHHHHHHhcCCCceeeEecccCC--ceEEEEEe
Q 003384 466 FDPSLKIGEGGYGSIYKGLLRHMQ--VAIKMLHPHSL---QGPSEFQQEIDILSKIRHPNLVTLVGACPE--VWTLVYEY 538 (824)
Q Consensus 466 f~~~~~LG~G~fG~Vykg~~~~~~--VAvK~l~~~~~---~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~~--~~~LV~Ey 538 (824)
+.....||-||||.|=.+..++.. +|+|++++... ...+++..|-+||..++.|.||+||-.|.+ ..|+.||-
T Consensus 422 l~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmEa 501 (732)
T KOG0614|consen 422 LKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLMEA 501 (732)
T ss_pred hhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHHh
Confidence 344556999999999998887655 78888876433 334678899999999999999999999955 57889999
Q ss_pred cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccc
Q 003384 539 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEI 618 (824)
Q Consensus 539 ~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~ 618 (824)
|-||.|...|. .++.|+..+...++..+.+|+.|||. +|||.|||||+|++||.+|.+||.|||+|+.+....
T Consensus 502 ClGGElWTiLr---dRg~Fdd~tarF~~acv~EAfeYLH~---k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~- 574 (732)
T KOG0614|consen 502 CLGGELWTILR---DRGSFDDYTARFYVACVLEAFEYLHR---KGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGR- 574 (732)
T ss_pred hcCchhhhhhh---hcCCcccchhhhhHHHHHHHHHHHHh---cCceeccCChhheeeccCCceEEeehhhHHHhccCC-
Confidence 99999999994 44568888899999999999999999 899999999999999999999999999999876543
Q ss_pred cCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCCCCC
Q 003384 619 SSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWP 698 (824)
Q Consensus 619 ~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p 698 (824)
.. .+..|||.|.|||++.+.+++.++|.||||+++|||+||.|||.+.+.+......- .-+| .-.||
T Consensus 575 --KT------wTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~IL---kGid--~i~~P 641 (732)
T KOG0614|consen 575 --KT------WTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLIL---KGID--KIEFP 641 (732)
T ss_pred --ce------eeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHH---hhhh--hhhcc
Confidence 11 34569999999999999999999999999999999999999999887654321110 1111 12467
Q ss_pred hhhHHHHHHHHHHHhhhccCCCCCh
Q 003384 699 FVQAEQLANLAMRCCEMSRKSRPEL 723 (824)
Q Consensus 699 ~~~~~~l~~Li~~Cl~~~P~~RPt~ 723 (824)
........+|+.+.|..+|.+|-..
T Consensus 642 r~I~k~a~~Lik~LCr~~P~ERLG~ 666 (732)
T KOG0614|consen 642 RRITKTATDLIKKLCRDNPTERLGY 666 (732)
T ss_pred cccchhHHHHHHHHHhcCcHhhhcc
Confidence 7788899999999999999999863
No 373
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.97 E-value=7.7e-31 Score=315.01 Aligned_cols=143 Identities=29% Similarity=0.435 Sum_probs=126.0
Q ss_pred CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCC---chhHHHHHHHHHhcCCCceeeEeccc--CCceEEEE
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQG---PSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVY 536 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~---~~~f~~Ei~iL~~l~HpnIv~L~g~~--~~~~~LV~ 536 (824)
.+|.+.++||+|+||.||+|.+. +..||||++....... ...+..|+.++..++||||+++++++ ....+|||
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm 83 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM 83 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence 46888999999999999999987 6889999987643322 24688999999999999999999887 35689999
Q ss_pred EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccc
Q 003384 537 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRF 612 (824)
Q Consensus 537 Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~ 612 (824)
||+.|++|.+++.. ...+++..++.|+.||+.||.|||. ++||||||||+||||+.++.+||+|||+++.
T Consensus 84 Ey~~g~~L~~li~~---~~~l~~~~~~~i~~qil~aL~yLH~---~gIiHrDLKP~NILl~~~g~vkL~DFGls~~ 153 (669)
T cd05610 84 EYLIGGDVKSLLHI---YGYFDEEMAVKYISEVALALDYLHR---HGIIHRDLKPDNMLISNEGHIKLTDFGLSKV 153 (669)
T ss_pred eCCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCccHHHEEEcCCCCEEEEeCCCCcc
Confidence 99999999999843 3458889999999999999999999 7999999999999999999999999999873
No 374
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=1.1e-31 Score=278.02 Aligned_cols=248 Identities=23% Similarity=0.361 Sum_probs=191.3
Q ss_pred ceeeecCceEEEEEE--ECCeEEEEEEecCCCCCCchhHHHHHHHHHhcC-CCceeeEecccCC--ceEEEEEecCCCCh
Q 003384 470 LKIGEGGYGSIYKGL--LRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIR-HPNLVTLVGACPE--VWTLVYEYLPNGSL 544 (824)
Q Consensus 470 ~~LG~G~fG~Vykg~--~~~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~-HpnIv~L~g~~~~--~~~LV~Ey~~ggsL 544 (824)
..||+|+|+.|-.++ .++..+|||++.+........+.+|++++.+.+ |+||+.|+.+|++ .+|||||-|.||+|
T Consensus 84 e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~GGpl 163 (463)
T KOG0607|consen 84 ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRGGPL 163 (463)
T ss_pred HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccCchH
Confidence 469999999998664 567899999999887777888999999999995 9999999999954 79999999999999
Q ss_pred hhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCC---CcceeeccccccccccccccCC
Q 003384 545 EDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDAN---FVSKLSDFGISRFLSQNEISSN 621 (824)
Q Consensus 545 ~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~---~~vKL~DFGla~~~~~~~~~~~ 621 (824)
..++.. ...|++....++..+|+.||.|||. +||.||||||+|||.... ..+||+||.|...+.....-..
T Consensus 164 LshI~~---~~~F~E~EAs~vvkdia~aLdFlH~---kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~sp 237 (463)
T KOG0607|consen 164 LSHIQK---RKHFNEREASRVVKDIASALDFLHT---KGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSP 237 (463)
T ss_pred HHHHHH---hhhccHHHHHHHHHHHHHHHHHHhh---cCcccccCCccceeecCCCCcCceeeeccccccccccCCCCCC
Confidence 999853 4568999999999999999999999 999999999999999643 3689999999875443322221
Q ss_pred CccccccCCCCCCcccCChhhhc---c--CCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhc--------ccc
Q 003384 622 NTTLCCRTDPKGTFAYMDPEFLA---S--GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGK--------LKN 688 (824)
Q Consensus 622 ~~~~~~~~~~~GT~~Y~APE~l~---~--~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~--------~~~ 688 (824)
. ......+++|+..|||||+.. + ..|+.++|.||||||||-||+|.+||.+.......++.|. +.+
T Consensus 238 a-stP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFe 316 (463)
T KOG0607|consen 238 A-STPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFE 316 (463)
T ss_pred C-CCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHH
Confidence 1 112235678999999999753 2 3689999999999999999999999965422222222111 111
Q ss_pred -----ccCCCCCCCChhhHHHHHHHHHHHhhhccCCCCChHH
Q 003384 689 -----LLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 689 -----~ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
.+.....+| ...+.+..+++...+-.++.+|-+..+
T Consensus 317 sIQEGkYeFPdkdW-ahIS~eakdlisnLlvrda~~rlsa~~ 357 (463)
T KOG0607|consen 317 SIQEGKYEFPDKDW-AHISSEAKDLISNLLVRDAKQRLSAAQ 357 (463)
T ss_pred HHhccCCcCChhhh-HHhhHHHHHHHHHHHhccHHhhhhhhh
Confidence 111122233 245677889999999999999988743
No 375
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.97 E-value=4.2e-31 Score=277.11 Aligned_cols=217 Identities=24% Similarity=0.213 Sum_probs=175.0
Q ss_pred cCceEEEEEEEC--CeEEEEEEecCCCCCCchhHHHHHHHHHhcCCCceeeEecccC--CceEEEEEecCCCChhhhhhc
Q 003384 475 GGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYLPNGSLEDRLSC 550 (824)
Q Consensus 475 G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~Ey~~ggsL~~~L~~ 550 (824)
|.||.||++.+. +..||+|.+.... .+.+|...+....||||+++++++. +..++||||++||+|.+++..
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 78 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK 78 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence 899999999875 5789999987543 3445666666678999999999874 468899999999999999853
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccccCCCccccccCC
Q 003384 551 KDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTD 630 (824)
Q Consensus 551 ~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~ 630 (824)
. .++++..+..++.+++.||.|||. ++|+||||||+||+++.++.++|+|||++....... ..
T Consensus 79 ~---~~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~-----------~~ 141 (237)
T cd05576 79 F---LNIPEECVKRWAAEMVVALDALHR---EGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSC-----------DG 141 (237)
T ss_pred h---cCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEEcCCCCEEEecccchhcccccc-----------cc
Confidence 2 458999999999999999999999 899999999999999999999999999876543221 12
Q ss_pred CCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCCCCChhhHHHHHHHHH
Q 003384 631 PKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAM 710 (824)
Q Consensus 631 ~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~ 710 (824)
..++..|+|||++.+..++.++|||||||++|+|++|++||....... . .......|...+..+.+++.
T Consensus 142 ~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~---~--------~~~~~~~~~~~~~~~~~li~ 210 (237)
T cd05576 142 EAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGI---N--------THTTLNIPEWVSEEARSLLQ 210 (237)
T ss_pred CCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhc---c--------cccccCCcccCCHHHHHHHH
Confidence 346778999999988889999999999999999999998875432110 0 00011233445678999999
Q ss_pred HHhhhccCCCCChH
Q 003384 711 RCCEMSRKSRPELG 724 (824)
Q Consensus 711 ~Cl~~~P~~RPt~~ 724 (824)
+|++.+|.+||++.
T Consensus 211 ~~l~~dp~~R~~~~ 224 (237)
T cd05576 211 QLLQFNPTERLGAG 224 (237)
T ss_pred HHccCCHHHhcCCC
Confidence 99999999999973
No 376
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=3.9e-31 Score=284.97 Aligned_cols=259 Identities=22% Similarity=0.336 Sum_probs=192.4
Q ss_pred CCCCccceeeecCceEEEEEEECCeEEEEEEecCCCCCCchhHHHHHHHHHh--cCCCceeeEecccC------CceEEE
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSK--IRHPNLVTLVGACP------EVWTLV 535 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~~~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~--l~HpnIv~L~g~~~------~~~~LV 535 (824)
......+.||+|.||+||+|.|+|..||||+|.... ...+.+|.+|++. |+|+||+.++++-. ...+||
T Consensus 211 rqI~L~e~IGkGRyGEVwrG~wrGe~VAVKiF~srd---E~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLv 287 (513)
T KOG2052|consen 211 RQIVLQEIIGKGRFGEVWRGRWRGEDVAVKIFSSRD---ERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWLV 287 (513)
T ss_pred heeEEEEEecCccccceeeccccCCceEEEEecccc---hhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEEe
Confidence 456677889999999999999999999999997644 3468899999876 59999999998752 247899
Q ss_pred EEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhh-----cCCCceEeccccCCcEEecCCCcceeeccccc
Q 003384 536 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHS-----CKPHSIVHGDLKPANILLDANFVSKLSDFGIS 610 (824)
Q Consensus 536 ~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~-----~~~~giiHrDLKp~NILld~~~~vKL~DFGla 610 (824)
.+|-+.|||.|+|. ...++....++++..+|.||++||. .....|.|||||+.|||+..||..-|+|+|||
T Consensus 288 TdYHe~GSL~DyL~----r~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLA 363 (513)
T KOG2052|consen 288 TDYHEHGSLYDYLN----RNTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 363 (513)
T ss_pred eecccCCcHHHHHh----hccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceee
Confidence 99999999999993 3568899999999999999999995 22246999999999999999999999999999
Q ss_pred cccccccccCCCccccccCCCCCCcccCChhhhccC----CCC--cchhHHhHHHHHHHHHhC----------CCCCCCc
Q 003384 611 RFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG----ELT--PKSDVYSFGIILLRLLTG----------RPALGIT 674 (824)
Q Consensus 611 ~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~----~~t--~ksDVwSlGvvL~ELltG----------~~Pf~~~ 674 (824)
-........ .....+..+||.+|||||++... .+. ..+||||||.|+||+... ++||...
T Consensus 364 v~h~~~t~~----idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~ 439 (513)
T KOG2052|consen 364 VRHDSDTDT----IDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDV 439 (513)
T ss_pred EEecccCCc----ccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccC
Confidence 866544211 11223567899999999998653 121 358999999999999752 2676422
Q ss_pred ----hHHHHHHhhhccccccCCCCCCCC-hhhHHHHHHHHHHHhhhccCCCCChHHHHHHHHHHH
Q 003384 675 ----KEVQYALDTGKLKNLLDPLAGDWP-FVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM 734 (824)
Q Consensus 675 ----~~~~~~~~~~~~~~~ld~~~~~~p-~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le~l 734 (824)
+.++.-.+.--...+-......|. ......+.+|+..||..+|.-|-+.. -+-..|..+
T Consensus 440 Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltAL-riKKtl~~l 503 (513)
T KOG2052|consen 440 VPSDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTAL-RIKKTLAKL 503 (513)
T ss_pred CCCCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHH-HHHHHHHHH
Confidence 111111111111111112223333 23456889999999999999999873 344444444
No 377
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=1.3e-30 Score=299.54 Aligned_cols=254 Identities=28% Similarity=0.391 Sum_probs=205.9
Q ss_pred hhhHhhhcCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCCchhHHHHHHHHHhc-CCCceeeEeccc----
Q 003384 456 FSEIEGATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKI-RHPNLVTLVGAC---- 528 (824)
Q Consensus 456 ~~ei~~~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l-~HpnIv~L~g~~---- 528 (824)
++-+...+..|.+...||.|.||.||+++.. ++.+|+|++..... ..+++..|.+||+.+ +|||++.+||++
T Consensus 11 ~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d-~deEiE~eynil~~~~~hpnv~~fyg~~~k~~ 89 (953)
T KOG0587|consen 11 LSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTED-EEEEIELEYNMLKKYSHHPNVATFYGAFIKKD 89 (953)
T ss_pred hhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCcc-ccHHHHHHHHHHHhccCCCCcceEEEEEEEec
Confidence 4445556778999999999999999988654 68899999877543 345788999999988 699999999987
Q ss_pred ---CCceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceee
Q 003384 529 ---PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLS 605 (824)
Q Consensus 529 ---~~~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~ 605 (824)
.+.++||||||.|||..|++.... +..+.|..+..|+.+++.||.+||. +.+||||||-.||||+.++.+||+
T Consensus 90 ~~~~DqLWLVMEfC~gGSVTDLVKn~~-g~rl~E~~IaYI~re~lrgl~HLH~---nkviHRDikG~NiLLT~e~~VKLv 165 (953)
T KOG0587|consen 90 PGNGDQLWLVMEFCGGGSVTDLVKNTK-GNRLKEEWIAYILREILRGLAHLHN---NKVIHRDIKGQNVLLTENAEVKLV 165 (953)
T ss_pred CCCCCeEEEEeeccCCccHHHHHhhhc-ccchhhHHHHHHHHHHHHHHHHHhh---cceeeecccCceEEEeccCcEEEe
Confidence 467899999999999999996655 6779999999999999999999999 779999999999999999999999
Q ss_pred ccccccccccccccCCCccccccCCCCCCcccCChhhhccC-----CCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHH
Q 003384 606 DFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG-----ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYA 680 (824)
Q Consensus 606 DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-----~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~ 680 (824)
|||++..+... ...+.+.+||+.|||||++... .|+..+|+||||++..||.-|.||+.....+...
T Consensus 166 DFGvSaQldsT--------~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraL 237 (953)
T KOG0587|consen 166 DFGVSAQLDST--------VGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRAL 237 (953)
T ss_pred eeeeeeeeecc--------cccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhh
Confidence 99998765432 1223567899999999998643 4778999999999999999999999766554432
Q ss_pred HhhhccccccCCCCCCCChhhHHHHHHHHHHHhhhccCCCCChHHH
Q 003384 681 LDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKD 726 (824)
Q Consensus 681 ~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~ 726 (824)
...-+- .|.....|..-+..+.++|..||..+..+||++.+.
T Consensus 238 F~IpRN----PPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~l 279 (953)
T KOG0587|consen 238 FLIPRN----PPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEEL 279 (953)
T ss_pred ccCCCC----CCccccchhhHHHHHHHHHHHHHhhccccCcchhhh
Confidence 221100 112223355667899999999999999999998543
No 378
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=99.97 E-value=1.9e-31 Score=274.62 Aligned_cols=244 Identities=22% Similarity=0.360 Sum_probs=190.0
Q ss_pred hcCCCCcc-ceeeecCceEEEEEEEC--CeEEEEEEecCCCCCCchhHHHHHHHHHhc-CCCceeeEecccCC------c
Q 003384 462 ATHNFDPS-LKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKI-RHPNLVTLVGACPE------V 531 (824)
Q Consensus 462 ~~~~f~~~-~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l-~HpnIv~L~g~~~~------~ 531 (824)
.+.+|.+. ++||-|-.|.|.....+ +..+|+|++.. ....++|++..-.. .|||||.+++++.+ .
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~D-----s~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkc 133 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLD-----SPKARREVELHWMASGHPHIVSIIDVYENSYQGRKC 133 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhc-----CHHHHhHhhhhhhhcCCCceEEeehhhhhhccCcee
Confidence 34456543 57999999999888765 56799999853 34678899886655 59999999998843 3
Q ss_pred eEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEec---CCCcceeeccc
Q 003384 532 WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLD---ANFVSKLSDFG 608 (824)
Q Consensus 532 ~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld---~~~~vKL~DFG 608 (824)
+.+|||+|+||.|...+..+ ....|++.+...|..+|+.|+.|||+ .+|.||||||+|+|.. .|-.+||+|||
T Consensus 134 LLiVmE~meGGeLfsriq~~-g~~afTErea~eI~~qI~~Av~~lH~---~nIAHRDlKpENLLyt~t~~na~lKLtDfG 209 (400)
T KOG0604|consen 134 LLIVMECMEGGELFSRIQDR-GDQAFTEREASEIMKQIGLAVRYLHS---MNIAHRDLKPENLLYTTTSPNAPLKLTDFG 209 (400)
T ss_pred eEeeeecccchHHHHHHHHc-ccccchHHHHHHHHHHHHHHHHHHHh---cchhhccCChhheeeecCCCCcceEecccc
Confidence 56899999999999999654 34569999999999999999999999 8899999999999996 45689999999
Q ss_pred cccccccccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHH--HHHHhhhcc
Q 003384 609 ISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEV--QYALDTGKL 686 (824)
Q Consensus 609 la~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~--~~~~~~~~~ 686 (824)
+|+...... .. .+..-|+.|.|||++....|+..+|+||+||++|-|++|.|||...... ...+.....
T Consensus 210 FAK~t~~~~---~L------~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~ 280 (400)
T KOG0604|consen 210 FAKETQEPG---DL------MTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIR 280 (400)
T ss_pred cccccCCCc---cc------cCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhh
Confidence 998654322 11 3345799999999999999999999999999999999999999643221 111111111
Q ss_pred ccccCCCCCCCChhhHHHHHHHHHHHhhhccCCCCChH
Q 003384 687 KNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELG 724 (824)
Q Consensus 687 ~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~ 724 (824)
..-++....+| ...++...++|+.+|..+|.+|-|+.
T Consensus 281 ~gqy~FP~pEW-s~VSe~aKdlIR~LLkt~PteRlTI~ 317 (400)
T KOG0604|consen 281 TGQYEFPEPEW-SCVSEAAKDLIRKLLKTEPTERLTIE 317 (400)
T ss_pred ccCccCCChhH-hHHHHHHHHHHHHHhcCCchhheeHH
Confidence 12222233344 34678899999999999999999993
No 379
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=1.9e-30 Score=307.68 Aligned_cols=252 Identities=29% Similarity=0.478 Sum_probs=201.7
Q ss_pred CCCCccceeeecCceEEEEEEEC---------CeEEEEEEecCCCCC-CchhHHHHHHHHHhc-CCCceeeEecccCC--
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLLR---------HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKI-RHPNLVTLVGACPE-- 530 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~~---------~~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l-~HpnIv~L~g~~~~-- 530 (824)
.+..+.+.||.|.||.|++|... ...||||.++..... ..+.+..|+++|+.+ .||||+.|+|+|..
T Consensus 296 ~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~ 375 (609)
T KOG0200|consen 296 ENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDG 375 (609)
T ss_pred hhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCC
Confidence 34455568999999999999753 246999999865433 356799999999999 59999999999954
Q ss_pred ceEEEEEecCCCChhhhhhccC-----CC--------CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEec
Q 003384 531 VWTLVYEYLPNGSLEDRLSCKD-----NS--------PPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLD 597 (824)
Q Consensus 531 ~~~LV~Ey~~ggsL~~~L~~~~-----~~--------~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld 597 (824)
..++|+||+..|+|.++|.... .. ..|+....+.++.|||.|+.||++ .++|||||-..|||+.
T Consensus 376 ~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~---~~~vHRDLAaRNVLi~ 452 (609)
T KOG0200|consen 376 PLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLAS---VPCVHRDLAARNVLIT 452 (609)
T ss_pred ceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhh---CCccchhhhhhhEEec
Confidence 6789999999999999997554 00 248899999999999999999999 8899999999999999
Q ss_pred CCCcceeeccccccccccccccCCCccccccCCCCC--CcccCChhhhccCCCCcchhHHhHHHHHHHHHh-CCCCCCCc
Q 003384 598 ANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKG--TFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGIT 674 (824)
Q Consensus 598 ~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~G--T~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELlt-G~~Pf~~~ 674 (824)
.+..+||+|||+|+.......... ....| ...|||||.+....|+.++|||||||+||||+| |..|+.+.
T Consensus 453 ~~~~~kIaDFGlar~~~~~~~y~~-------~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~ 525 (609)
T KOG0200|consen 453 KNKVIKIADFGLARDHYNKDYYRT-------KSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGI 525 (609)
T ss_pred CCCEEEEccccceeccCCCCceEe-------cCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCC
Confidence 999999999999996554432211 11122 346999999999999999999999999999998 88999763
Q ss_pred h---HHHHHHhhhccccccCCCCCCCChhhHHHHHHHHHHHhhhccCCCCChHHHHHHHHHHH
Q 003384 675 K---EVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM 734 (824)
Q Consensus 675 ~---~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le~l 734 (824)
. .+...+..| .....|..+..++.+++..||+.+|.+||++ .++.+.++..
T Consensus 526 ~~~~~l~~~l~~G--------~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F-~~~~~~~~~~ 579 (609)
T KOG0200|consen 526 PPTEELLEFLKEG--------NRMEQPEHCSDEIYDLMKSCWNADPEDRPTF-SECVEFFEKH 579 (609)
T ss_pred CcHHHHHHHHhcC--------CCCCCCCCCCHHHHHHHHHHhCCCcccCCCH-HHHHHHHHHH
Confidence 2 221122222 2334577788899999999999999999999 5666666653
No 380
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=5.9e-32 Score=272.24 Aligned_cols=252 Identities=25% Similarity=0.433 Sum_probs=192.8
Q ss_pred CCCCccceeeecCceEEEEEEEC--CeEEEEEEecCC--CCCCchhHHHHHHHHHhcCCCceeeEecccC----------
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPH--SLQGPSEFQQEIDILSKIRHPNLVTLVGACP---------- 529 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~--~~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~---------- 529 (824)
+.|....+||+|.||+||++... ++.||+|++-.. ...-+....+|+.+|..|.|+|++.|+..|.
T Consensus 17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r 96 (376)
T KOG0669|consen 17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDR 96 (376)
T ss_pred hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccccc
Confidence 45667778999999999999876 467898865432 2222456789999999999999999999882
Q ss_pred CceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccc
Q 003384 530 EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGI 609 (824)
Q Consensus 530 ~~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGl 609 (824)
..+|+||.+|+. +|..+|. +....++..++.+++.++..||.|+|. +.|+|||+|++|+||+.+|.+||+|||+
T Consensus 97 ~t~ylVf~~ceh-DLaGlLs--n~~vr~sls~Ikk~Mk~Lm~GL~~iHr---~kilHRDmKaaNvLIt~dgilklADFGl 170 (376)
T KOG0669|consen 97 ATFYLVFDFCEH-DLAGLLS--NRKVRFSLSEIKKVMKGLMNGLYYIHR---NKILHRDMKAANVLITKDGILKLADFGL 170 (376)
T ss_pred ceeeeeHHHhhh-hHHHHhc--CccccccHHHHHHHHHHHHHHHHHHHH---hhHHhhcccHhhEEEcCCceEEeecccc
Confidence 138999999976 7888884 333578999999999999999999999 7899999999999999999999999999
Q ss_pred ccccccccccCCCccccccCCCCCCcccCChhhhccC-CCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHh----hh
Q 003384 610 SRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALD----TG 684 (824)
Q Consensus 610 a~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~----~~ 684 (824)
++.+.......... .+..+-|.+|.+||.+.+. .|+++.|||.-|||+.||+||.|.|.+..+...... .|
T Consensus 171 ar~fs~~~n~~kpr----ytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcG 246 (376)
T KOG0669|consen 171 ARAFSTSKNVVKPR----YTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCG 246 (376)
T ss_pred ccceecccccCCCC----cccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhc
Confidence 98876554332221 2556679999999998875 799999999999999999999999976654332211 11
Q ss_pred cccc-------------cc--CCCCCC---------CChhhHHHHHHHHHHHhhhccCCCCChHH
Q 003384 685 KLKN-------------LL--DPLAGD---------WPFVQAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 685 ~~~~-------------~l--d~~~~~---------~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
.+.. .+ .|+... .|........+|+.+++..||.+||+..+
T Consensus 247 s~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~ 311 (376)
T KOG0669|consen 247 SITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQ 311 (376)
T ss_pred cCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHh
Confidence 1111 11 111000 01122346789999999999999999843
No 381
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.97 E-value=4.4e-31 Score=287.18 Aligned_cols=238 Identities=27% Similarity=0.440 Sum_probs=193.6
Q ss_pred cceeeecCceEEEEEEEC--CeEEEEEEecCCCC--CCchhHHHHHHHHHhcCCCceeeEeccc--CCceEEEEEecCCC
Q 003384 469 SLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYLPNG 542 (824)
Q Consensus 469 ~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~--~~~~~f~~Ei~iL~~l~HpnIv~L~g~~--~~~~~LV~Ey~~gg 542 (824)
.+.||.|.||+||-|+++ |+.||||++.+... .....+++|+.||..++||.||.|---| ++..+.|||-+.|.
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~GD 648 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHGD 648 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcch
Confidence 467999999999999886 68999999976433 2346799999999999999999998777 56889999999765
Q ss_pred ChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCC---Ccceeecccccccccccccc
Q 003384 543 SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDAN---FVSKLSDFGISRFLSQNEIS 619 (824)
Q Consensus 543 sL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~---~~vKL~DFGla~~~~~~~~~ 619 (824)
-|+-+|.. ..+.|+......++.||+.||.|||. ++|+|.||||+||||... -.+||||||+|+.+.+..+
T Consensus 649 MLEMILSs--EkgRL~er~TkFlvtQIL~ALr~LH~---knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksF- 722 (888)
T KOG4236|consen 649 MLEMILSS--EKGRLPERITKFLVTQILVALRYLHF---KNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSF- 722 (888)
T ss_pred HHHHHHHh--hcccchHHHHHHHHHHHHHHHHHhhh---cceeeccCCchheeeccCCCCCceeeccccceeecchhhh-
Confidence 55555542 34568888888999999999999999 899999999999999643 4799999999999876543
Q ss_pred CCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCCCCCh
Q 003384 620 SNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPF 699 (824)
Q Consensus 620 ~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~ 699 (824)
+...+|||.|+|||++.+.+|+..-|+||.|||+|--++|.-||.-+.++...+.+..+.. ...+|.
T Consensus 723 --------RrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQIQNAaFMy----Pp~PW~- 789 (888)
T KOG4236|consen 723 --------RRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQIQNAAFMY----PPNPWS- 789 (888)
T ss_pred --------hhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchhHHhhcccccc----CCCchh-
Confidence 2456799999999999999999999999999999999999999977665554443322211 122332
Q ss_pred hhHHHHHHHHHHHhhhccCCCCChHH
Q 003384 700 VQAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 700 ~~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
..+....+||...|+..-.+|-+..+
T Consensus 790 eis~~AidlIn~LLqVkm~kRysvdk 815 (888)
T KOG4236|consen 790 EISPEAIDLINNLLQVKMRKRYSVDK 815 (888)
T ss_pred hcCHHHHHHHHHHHHHHHHHhcchHh
Confidence 34567889999999999999988744
No 382
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.97 E-value=1.5e-30 Score=250.34 Aligned_cols=199 Identities=31% Similarity=0.433 Sum_probs=165.8
Q ss_pred CCCccceeeecCceEEEEEEECC--eEEEEEEecCCCC--CCchhHHHHHHHHHhcCCCceeeEeccc--CCceEEEEEe
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSL--QGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEY 538 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~~--~~VAvK~l~~~~~--~~~~~f~~Ei~iL~~l~HpnIv~L~g~~--~~~~~LV~Ey 538 (824)
+|+..++||+|.||+||+|+.+. .-||+|.++.... .-+....+|+.+|+.++|.|||+|++.. .....+|+||
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~ 82 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF 82 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence 45666789999999999998764 6799999876533 2356789999999999999999999976 4568899999
Q ss_pred cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccc
Q 003384 539 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEI 618 (824)
Q Consensus 539 ~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~ 618 (824)
|. .+|..++... .+.++.+....++.|+++||.|+|+ ++++||||||.|+||+.||.+||+|||+++-+.-..
T Consensus 83 cd-qdlkkyfdsl--ng~~d~~~~rsfmlqllrgl~fchs---hnvlhrdlkpqnllin~ngelkladfglarafgipv- 155 (292)
T KOG0662|consen 83 CD-QDLKKYFDSL--NGDLDPEIVRSFMLQLLRGLGFCHS---HNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPV- 155 (292)
T ss_pred hh-HHHHHHHHhc--CCcCCHHHHHHHHHHHHhhhhhhhh---hhhhhccCCcceEEeccCCcEEecccchhhhcCCce-
Confidence 95 4777776432 4568889999999999999999999 889999999999999999999999999999765332
Q ss_pred cCCCccccccCCCCCCcccCChhhhccC-CCCcchhHHhHHHHHHHHHh-CCCCCCCchHH
Q 003384 619 SSNNTTLCCRTDPKGTFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLT-GRPALGITKEV 677 (824)
Q Consensus 619 ~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~t~ksDVwSlGvvL~ELlt-G~~Pf~~~~~~ 677 (824)
.+....+-|.+|.+|.++.+. -|++..|+||-|||+.|+.. |+|.|.+.+-.
T Consensus 156 -------rcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvd 209 (292)
T KOG0662|consen 156 -------RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVD 209 (292)
T ss_pred -------EeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHH
Confidence 122345579999999999886 48889999999999999985 88888766543
No 383
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.97 E-value=4.5e-32 Score=275.26 Aligned_cols=241 Identities=26% Similarity=0.308 Sum_probs=184.8
Q ss_pred ccceeeecCceEEEEEEEC--CeEEEEEEecCCCC-CCchhHHHHHHHHHhc-CCCceeeEeccc-C-CceEEEEEecCC
Q 003384 468 PSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL-QGPSEFQQEIDILSKI-RHPNLVTLVGAC-P-EVWTLVYEYLPN 541 (824)
Q Consensus 468 ~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l-~HpnIv~L~g~~-~-~~~~LV~Ey~~g 541 (824)
....||.|+||+|+|-.++ ++..|||.+..... ....++..|.++..+- +.||||++||++ . ...++.||+|.
T Consensus 68 dlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd- 146 (361)
T KOG1006|consen 68 DLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMD- 146 (361)
T ss_pred HHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHh-
Confidence 3456999999999998876 57899999987544 3456788899877665 689999999986 3 35678999984
Q ss_pred CChhhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccccccc
Q 003384 542 GSLEDRLSCK--DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEIS 619 (824)
Q Consensus 542 gsL~~~L~~~--~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~ 619 (824)
.||..+...- .....+++...-.|......||.||... ..||||||||+|||||..|.+||||||++..+.....
T Consensus 147 ~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~--lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~SiA- 223 (361)
T KOG1006|consen 147 ISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEE--LKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDSIA- 223 (361)
T ss_pred hhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHH--hhhhhccCChhheEEecCCCEeeecccchHhHHHHHH-
Confidence 5765544211 2234588888888888999999999875 4699999999999999999999999999987654321
Q ss_pred CCCccccccCCCCCCcccCChhhhcc--CCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCCCC
Q 003384 620 SNNTTLCCRTDPKGTFAYMDPEFLAS--GELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDW 697 (824)
Q Consensus 620 ~~~~~~~~~~~~~GT~~Y~APE~l~~--~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~ 697 (824)
.+..+|...|||||.+.. .+|+.+|||||||++|||+.||+-|+...+.+-..+. .....||.....
T Consensus 224 --------kT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~---~Vv~gdpp~l~~ 292 (361)
T KOG1006|consen 224 --------KTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLC---QVVIGDPPILLF 292 (361)
T ss_pred --------hhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHH---HHHcCCCCeecC
Confidence 244578999999999864 3699999999999999999999999875544322221 112223322222
Q ss_pred C---hhhHHHHHHHHHHHhhhccCCCCCh
Q 003384 698 P---FVQAEQLANLAMRCCEMSRKSRPEL 723 (824)
Q Consensus 698 p---~~~~~~l~~Li~~Cl~~~P~~RPt~ 723 (824)
+ ...+..+..++..|+..+..+||.+
T Consensus 293 ~~~~~~~s~~~~~fintCl~Kd~~~Rpky 321 (361)
T KOG1006|consen 293 DKECVHYSFSMVRFINTCLIKDRSDRPKY 321 (361)
T ss_pred cccccccCHHHHHHHHHHhhcccccCcch
Confidence 2 3367799999999999999999998
No 384
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.96 E-value=2.5e-29 Score=260.10 Aligned_cols=230 Identities=32% Similarity=0.425 Sum_probs=185.5
Q ss_pred CceEEEEEEECC--eEEEEEEecCCCCCC-chhHHHHHHHHHhcCCCceeeEecccC--CceEEEEEecCCCChhhhhhc
Q 003384 476 GYGSIYKGLLRH--MQVAIKMLHPHSLQG-PSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYLPNGSLEDRLSC 550 (824)
Q Consensus 476 ~fG~Vykg~~~~--~~VAvK~l~~~~~~~-~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~Ey~~ggsL~~~L~~ 550 (824)
+||.||+|...+ ..+++|++....... ...+.+|+.++++++|+||+++++++. ...++||||+++++|.+++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 689999999864 889999998765544 578999999999999999999999884 568899999999999999853
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccccCCCccccccCC
Q 003384 551 KDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTD 630 (824)
Q Consensus 551 ~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~ 630 (824)
. ..+++..+..++.+++.+|.+||. .+++|+||+|.||+++.++.++|+|||++........ ...
T Consensus 81 ~---~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~---------~~~ 145 (244)
T smart00220 81 R---GRLSEDEARFYARQILSALEYLHS---NGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGGL---------LTT 145 (244)
T ss_pred c---cCCCHHHHHHHHHHHHHHHHHHHH---cCeecCCcCHHHeEECCCCcEEEccccceeeeccccc---------ccc
Confidence 2 238899999999999999999999 7999999999999999999999999999987654320 123
Q ss_pred CCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCCCCChh--hHHHHHHH
Q 003384 631 PKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFV--QAEQLANL 708 (824)
Q Consensus 631 ~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~--~~~~l~~L 708 (824)
..|+..|++||.+.+..++.++||||||+++|+|++|.+||............- ........+.. .+..+.++
T Consensus 146 ~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 220 (244)
T smart00220 146 FVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKI-----GKPKPPFPPPEWKISPEAKDL 220 (244)
T ss_pred ccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHH-----hccCCCCccccccCCHHHHHH
Confidence 458899999999998889999999999999999999999997632222111110 00000000111 45689999
Q ss_pred HHHHhhhccCCCCChHH
Q 003384 709 AMRCCEMSRKSRPELGK 725 (824)
Q Consensus 709 i~~Cl~~~P~~RPt~~~ 725 (824)
+.+|+..+|.+||++.+
T Consensus 221 i~~~l~~~p~~Rp~~~~ 237 (244)
T smart00220 221 IRKLLVKDPEKRLTAEE 237 (244)
T ss_pred HHHHccCCchhccCHHH
Confidence 99999999999999943
No 385
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=3.5e-30 Score=267.48 Aligned_cols=243 Identities=23% Similarity=0.306 Sum_probs=189.8
Q ss_pred CCCCccceeeecCceEEEEEEECC--eEEEEEEecCC---CCCCchhHHHHHHHHHhc-CCCceeeEecccC--CceEEE
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPH---SLQGPSEFQQEIDILSKI-RHPNLVTLVGACP--EVWTLV 535 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~~~--~~VAvK~l~~~---~~~~~~~f~~Ei~iL~~l-~HpnIv~L~g~~~--~~~~LV 535 (824)
.+|+...+||+|+|.+|..+.+.. +-+|+|++++. ...+.+-++.|-.+..+. +||.+|-|..+|. ...++|
T Consensus 250 ~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlffv 329 (593)
T KOG0695|consen 250 QDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFFV 329 (593)
T ss_pred ccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEEE
Confidence 468899999999999999887764 67999998764 233445577888888776 7999999999884 468899
Q ss_pred EEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccc
Q 003384 536 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQ 615 (824)
Q Consensus 536 ~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~ 615 (824)
.||++||+|.-++ .....|++.....+..+|.-||.|||+ +|||.||||.+|||||..|++||.|+|+++---.
T Consensus 330 ieyv~ggdlmfhm---qrqrklpeeharfys~ei~lal~flh~---rgiiyrdlkldnvlldaeghikltdygmcke~l~ 403 (593)
T KOG0695|consen 330 IEYVNGGDLMFHM---QRQRKLPEEHARFYSAEICLALNFLHE---RGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLG 403 (593)
T ss_pred EEEecCcceeeeh---hhhhcCcHHHhhhhhHHHHHHHHHHhh---cCeeeeeccccceEEccCCceeecccchhhcCCC
Confidence 9999999998887 345669999999999999999999999 9999999999999999999999999999984332
Q ss_pred ccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchH--HHHHHhhhccccccCCC
Q 003384 616 NEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKE--VQYALDTGKLKNLLDPL 693 (824)
Q Consensus 616 ~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~--~~~~~~~~~~~~~ld~~ 693 (824)
.+. . ..+..|||.|+|||++.+..|+..+|+|+|||+++||+.|+.||+...- .....+ .-+..++-..
T Consensus 404 ~gd----~----tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~nte-dylfqvilek 474 (593)
T KOG0695|consen 404 PGD----T----TSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTE-DYLFQVILEK 474 (593)
T ss_pred CCc----c----cccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchh-HHHHHHHhhh
Confidence 221 1 1345699999999999999999999999999999999999999974321 000000 0011111111
Q ss_pred CCCCChhhHHHHHHHHHHHhhhccCCCC
Q 003384 694 AGDWPFVQAEQLANLAMRCCEMSRKSRP 721 (824)
Q Consensus 694 ~~~~p~~~~~~l~~Li~~Cl~~~P~~RP 721 (824)
....|...+-....++...|+.+|.+|-
T Consensus 475 qiriprslsvkas~vlkgflnkdp~erl 502 (593)
T KOG0695|consen 475 QIRIPRSLSVKASHVLKGFLNKDPKERL 502 (593)
T ss_pred cccccceeehhhHHHHHHhhcCCcHHhc
Confidence 1223455556778888999999999885
No 386
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.96 E-value=7e-30 Score=287.16 Aligned_cols=233 Identities=27% Similarity=0.373 Sum_probs=185.8
Q ss_pred cCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCCchhHHHHHHHHHhc-CCCceeeEecccCC--ceEEEEE
Q 003384 463 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKI-RHPNLVTLVGACPE--VWTLVYE 537 (824)
Q Consensus 463 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l-~HpnIv~L~g~~~~--~~~LV~E 537 (824)
+..|.....+|.|+|+.|-.+... ++..++|++.... ....+|+.++... +||||+++.+.|.+ ..|+|||
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~----~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e 396 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA----DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVME 396 (612)
T ss_pred chhhccccccCCCCccceeeeeccccccchhheeccccc----cccccccchhhhhcCCCcceeecceecCCceeeeeeh
Confidence 556778888999999999888765 5789999987652 2456788777666 69999999999965 5789999
Q ss_pred ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEe-cCCCcceeeccccccccccc
Q 003384 538 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILL-DANFVSKLSDFGISRFLSQN 616 (824)
Q Consensus 538 y~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILl-d~~~~vKL~DFGla~~~~~~ 616 (824)
++.||-|.+.+... +.....+..|+.+|+.|+.|||. +|+|||||||+|||+ +..|+++|+|||.++.....
T Consensus 397 ~l~g~ell~ri~~~----~~~~~e~~~w~~~lv~Av~~LH~---~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~ 469 (612)
T KOG0603|consen 397 LLDGGELLRRIRSK----PEFCSEASQWAAELVSAVDYLHE---QGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS 469 (612)
T ss_pred hccccHHHHHHHhc----chhHHHHHHHHHHHHHHHHHHHh---cCeeecCCChhheeecCCCCcEEEEEechhhhCchh
Confidence 99999887777422 22236777899999999999999 899999999999999 68999999999999876544
Q ss_pred cccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCCC
Q 003384 617 EISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGD 696 (824)
Q Consensus 617 ~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~ 696 (824)
. ...+-|..|.|||++...+|+.+|||||||++||+||+|+.||.....-..... .+. .+.
T Consensus 470 ~-----------~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~-----~i~---~~~ 530 (612)
T KOG0603|consen 470 C-----------DTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHT-----RIQ---MPK 530 (612)
T ss_pred h-----------cccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHH-----hhc---CCc
Confidence 1 223458899999999999999999999999999999999999965432211110 111 112
Q ss_pred CChhhHHHHHHHHHHHhhhccCCCCChHH
Q 003384 697 WPFVQAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 697 ~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
+....+....+|+.+||+.+|.+||++.+
T Consensus 531 ~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~ 559 (612)
T KOG0603|consen 531 FSECVSDEAKDLLQQLLQVDPALRLGADE 559 (612)
T ss_pred cccccCHHHHHHHHHhccCChhhCcChhh
Confidence 22556789999999999999999999943
No 387
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.96 E-value=9.5e-29 Score=290.63 Aligned_cols=250 Identities=21% Similarity=0.215 Sum_probs=161.5
Q ss_pred hcCCCCccceeeecCceEEEEEEEC------CeEEEEEEecCCCCCCchhHHHHHHHHHhcCCCceeeEecc--------
Q 003384 462 ATHNFDPSLKIGEGGYGSIYKGLLR------HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGA-------- 527 (824)
Q Consensus 462 ~~~~f~~~~~LG~G~fG~Vykg~~~------~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIv~L~g~-------- 527 (824)
..++|...++||+|+||.||+|.+. +..||||.+..... .+.+..+ .+....+.+++.++..
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~--~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~ 205 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA--VEIWMNE--RVRRACPNSCADFVYGFLEPVSSK 205 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch--hHHHHHH--HHHhhchhhHHHHHHhhhcccccc
Confidence 5668999999999999999999875 45799998764321 1111111 1222223333332221
Q ss_pred cCCceEEEEEecCCCChhhhhhccCCC-----------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCceEecccc
Q 003384 528 CPEVWTLVYEYLPNGSLEDRLSCKDNS-----------------PPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLK 590 (824)
Q Consensus 528 ~~~~~~LV~Ey~~ggsL~~~L~~~~~~-----------------~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLK 590 (824)
.....+|||||+.+++|.+++...... .......+..|+.|++.||.|||+ ++|||||||
T Consensus 206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~---~gIiHRDLK 282 (566)
T PLN03225 206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHS---TGIVHRDVK 282 (566)
T ss_pred cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHH---CCEEeCcCC
Confidence 134688999999999999988533210 011123456799999999999999 899999999
Q ss_pred CCcEEecC-CCcceeeccccccccccccccCCCccccccCCCCCCcccCChhhhccC----------------------C
Q 003384 591 PANILLDA-NFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG----------------------E 647 (824)
Q Consensus 591 p~NILld~-~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~----------------------~ 647 (824)
|+||||+. ++.+||+|||+|+.+....... .....||+.|+|||.+... .
T Consensus 283 P~NILl~~~~~~~KL~DFGlA~~l~~~~~~~-------~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~ 355 (566)
T PLN03225 283 PQNIIFSEGSGSFKIIDLGAAADLRVGINYI-------PKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLN 355 (566)
T ss_pred HHHEEEeCCCCcEEEEeCCCccccccccccC-------CcccccCCCccChHHhhccCCCCCCccccccccccchhcccc
Confidence 99999985 6899999999998654322111 1335689999999976432 2
Q ss_pred CCcchhHHhHHHHHHHHHhCCCCCCCchH-HHHHHhhh-----ccccccCCCC-CC------CChhhHHHHHHHHHHHhh
Q 003384 648 LTPKSDVYSFGIILLRLLTGRPALGITKE-VQYALDTG-----KLKNLLDPLA-GD------WPFVQAEQLANLAMRCCE 714 (824)
Q Consensus 648 ~t~ksDVwSlGvvL~ELltG~~Pf~~~~~-~~~~~~~~-----~~~~~ld~~~-~~------~p~~~~~~l~~Li~~Cl~ 714 (824)
++.++|||||||+||||+++..+++.... +...+... .+...+.+.. .+ ..........+|+.+||+
T Consensus 356 ~~~k~DVwSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~ 435 (566)
T PLN03225 356 LPDRFDIYSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMR 435 (566)
T ss_pred CCCCcccHHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHcc
Confidence 34567999999999999997766542211 11111110 0011111110 00 000112345689999999
Q ss_pred hccCCCCChHH
Q 003384 715 MSRKSRPELGK 725 (824)
Q Consensus 715 ~~P~~RPt~~~ 725 (824)
.+|.+||++.+
T Consensus 436 ~dP~kR~ta~e 446 (566)
T PLN03225 436 FKGRQRISAKA 446 (566)
T ss_pred CCcccCCCHHH
Confidence 99999999843
No 388
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.96 E-value=4.7e-28 Score=278.94 Aligned_cols=254 Identities=20% Similarity=0.236 Sum_probs=175.9
Q ss_pred hcCCCCccceeeecCceEEEEEEE------------------CCeEEEEEEecCCCCCCch--------------hHHHH
Q 003384 462 ATHNFDPSLKIGEGGYGSIYKGLL------------------RHMQVAIKMLHPHSLQGPS--------------EFQQE 509 (824)
Q Consensus 462 ~~~~f~~~~~LG~G~fG~Vykg~~------------------~~~~VAvK~l~~~~~~~~~--------------~f~~E 509 (824)
..++|...++||+|+||.||+|.+ .+..||||.+......... .+..|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 456899999999999999999964 1356999998754322222 23457
Q ss_pred HHHHHhcCCCce-----eeEecccC----------CceEEEEEecCCCChhhhhhccCC---------------------
Q 003384 510 IDILSKIRHPNL-----VTLVGACP----------EVWTLVYEYLPNGSLEDRLSCKDN--------------------- 553 (824)
Q Consensus 510 i~iL~~l~HpnI-----v~L~g~~~----------~~~~LV~Ey~~ggsL~~~L~~~~~--------------------- 553 (824)
+.++.+++|.++ ++++|+|. ...+|||||+++|+|.++|.....
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 777778876654 66777763 246899999999999999864211
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccccCCCccccccCCCCC
Q 003384 554 SPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKG 633 (824)
Q Consensus 554 ~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~G 633 (824)
...+++..+..++.+++.||.|||. ++|+||||||+|||++.++.+||+|||++......... . .....+
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH~---~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~---~----~~~g~~ 372 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLHR---IGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINF---N----PLYGML 372 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCchHhEEECCCCcEEEEeCcCccccccCCcc---C----ccccCC
Confidence 1235677888999999999999999 88999999999999999999999999999755332111 0 012345
Q ss_pred CcccCChhhhccCC--------------------C--CcchhHHhHHHHHHHHHhCCC-CCCCchHHHHHHhh--hcccc
Q 003384 634 TFAYMDPEFLASGE--------------------L--TPKSDVYSFGIILLRLLTGRP-ALGITKEVQYALDT--GKLKN 688 (824)
Q Consensus 634 T~~Y~APE~l~~~~--------------------~--t~ksDVwSlGvvL~ELltG~~-Pf~~~~~~~~~~~~--~~~~~ 688 (824)
|+.|+|||.+.... | ..+.||||+||+||+|++|.. ||.....+...... .....
T Consensus 373 tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~ 452 (507)
T PLN03224 373 DPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNR 452 (507)
T ss_pred CcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHH
Confidence 89999999875432 1 124799999999999999975 77533222211110 00000
Q ss_pred --ccCCCCCCC--ChhhHHHHHHHHHHHhhhcc---CCCCChHH
Q 003384 689 --LLDPLAGDW--PFVQAEQLANLAMRCCEMSR---KSRPELGK 725 (824)
Q Consensus 689 --~ld~~~~~~--p~~~~~~l~~Li~~Cl~~~P---~~RPt~~~ 725 (824)
.......++ .........+|+.+++..+| .+|+++.+
T Consensus 453 ~r~~~~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~e 496 (507)
T PLN03224 453 WRMYKGQKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQ 496 (507)
T ss_pred HHhhcccCCCcccccccChHHHHHHHHHhccCCCCcccCCCHHH
Confidence 000001111 12245688999999999766 68999843
No 389
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.96 E-value=2e-29 Score=288.77 Aligned_cols=245 Identities=28% Similarity=0.375 Sum_probs=186.7
Q ss_pred CCCccceeeecCceE-EEEEEECCeEEEEEEecCCCCCCchhHHHHHHHHHhc-CCCceeeEecccC--CceEEEEEecC
Q 003384 465 NFDPSLKIGEGGYGS-IYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKI-RHPNLVTLVGACP--EVWTLVYEYLP 540 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~-Vykg~~~~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l-~HpnIv~L~g~~~--~~~~LV~Ey~~ 540 (824)
-|...+.+|.|+-|+ ||+|.+.++.||||++-... .....+|+..|+.- +|||||++|+.-. ...||..|.|.
T Consensus 510 ~~~~~eilG~Gs~Gt~Vf~G~ye~R~VAVKrll~e~---~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~ 586 (903)
T KOG1027|consen 510 FFSPKEILGYGSNGTVVFRGVYEGREVAVKRLLEEF---FDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCA 586 (903)
T ss_pred eeccHHHcccCCCCcEEEEEeeCCceehHHHHhhHh---HHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhh
Confidence 356667799999875 79999999999999986533 23578999999998 5999999998753 46889999995
Q ss_pred CCChhhhhhcc-CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecC---C--Ccceeeccccccccc
Q 003384 541 NGSLEDRLSCK-DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDA---N--FVSKLSDFGISRFLS 614 (824)
Q Consensus 541 ggsL~~~L~~~-~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~---~--~~vKL~DFGla~~~~ 614 (824)
.+|.+++... .......-...+.+..|++.||++||+ .+||||||||.||||+. + ..++|+|||+|+.+.
T Consensus 587 -~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHs---l~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~ 662 (903)
T KOG1027|consen 587 -CSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHS---LKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLA 662 (903)
T ss_pred -hhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHh---cccccccCCCceEEEEccCCCcceeEEecccccccccC
Confidence 5999999653 111111113456788999999999999 67999999999999975 2 478999999999887
Q ss_pred cccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhC-CCCCCCchHHHHHHhhhccccccCCC
Q 003384 615 QNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTG-RPALGITKEVQYALDTGKLKNLLDPL 693 (824)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG-~~Pf~~~~~~~~~~~~~~~~~~ld~~ 693 (824)
.+..+... ..+..||-+|+|||++....-+.++||||||||+|+.++| ..||+..-.-+..+..|...- ..+
T Consensus 663 ~~~sS~~r-----~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~NIl~~~~~L--~~L 735 (903)
T KOG1027|consen 663 GGKSSFSR-----LSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQANILTGNYTL--VHL 735 (903)
T ss_pred CCcchhhc-----ccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhhhhhcCccce--eee
Confidence 66543322 2567799999999999998888899999999999999996 899986654433333332211 111
Q ss_pred CCCCChhhHHHHHHHHHHHhhhccCCCCChHHHH
Q 003384 694 AGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDV 727 (824)
Q Consensus 694 ~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v 727 (824)
.. .. .....+||.+|++.+|..||++.+++
T Consensus 736 ~~---~~-d~eA~dLI~~ml~~dP~~RPsa~~VL 765 (903)
T KOG1027|consen 736 EP---LP-DCEAKDLISRMLNPDPQLRPSATDVL 765 (903)
T ss_pred cc---Cc-hHHHHHHHHHhcCCCcccCCCHHHHh
Confidence 11 11 11789999999999999999995443
No 390
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.96 E-value=4.6e-29 Score=248.44 Aligned_cols=260 Identities=22% Similarity=0.387 Sum_probs=196.6
Q ss_pred CCCCCccCCCChhhHh-hhcCCCCccceeeecCceEEEEEE--ECCeEEEEEEecCCCCCCchhHHHHHHHHHhcC-CCc
Q 003384 445 SHMPQFFSDFSFSEIE-GATHNFDPSLKIGEGGYGSIYKGL--LRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIR-HPN 520 (824)
Q Consensus 445 ~~~~~~~~~~~~~ei~-~~~~~f~~~~~LG~G~fG~Vykg~--~~~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~-Hpn 520 (824)
...+..+++|.--.+. +...+|++.+++|+|.|++||.|. .++..++||++++.. .+.+.+|+.||..|. |||
T Consensus 18 ~~rp~eYWdYE~~~i~wg~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk---kkKIkREikIL~nL~gg~N 94 (338)
T KOG0668|consen 18 EERPREYWDYESLVIDWGNQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK---KKKIKREIKILQNLRGGPN 94 (338)
T ss_pred ccCchhhcchhheeeeccccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH---HHHHHHHHHHHHhccCCCC
Confidence 3345556666543332 456789999999999999999997 456889999998753 357999999999997 999
Q ss_pred eeeEecccCC----ceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEe
Q 003384 521 LVTLVGACPE----VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILL 596 (824)
Q Consensus 521 Iv~L~g~~~~----~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILl 596 (824)
|++|++...+ ...||+||+.+.++..+. +.|+...+..++.+++.||.|+|+ +||+|||+||.|++|
T Consensus 95 Ii~L~DiV~Dp~SktpaLiFE~v~n~Dfk~ly------~tl~d~dIryY~~elLkALdyCHS---~GImHRDVKPhNvmI 165 (338)
T KOG0668|consen 95 IIKLLDIVKDPESKTPSLIFEYVNNTDFKQLY------PTLTDYDIRYYIYELLKALDYCHS---MGIMHRDVKPHNVMI 165 (338)
T ss_pred eeehhhhhcCccccCchhHhhhhccccHHHHh------hhhchhhHHHHHHHHHHHHhHHHh---cCcccccCCcceeee
Confidence 9999998844 467999999998887765 457777889999999999999999 999999999999999
Q ss_pred cC-CCcceeeccccccccccccccCCCccccccCCCCCCcccCChhhhccC-CCCcchhHHhHHHHHHHHHhCCCCCC-C
Q 003384 597 DA-NFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLTGRPALG-I 673 (824)
Q Consensus 597 d~-~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~t~ksDVwSlGvvL~ELltG~~Pf~-~ 673 (824)
|. .-.++|+|+|||.++...... +-.+.+..|..||.+... .|+..-|+|||||+|..|+..+.||- +
T Consensus 166 dh~~rkLrlIDWGLAEFYHp~~eY---------nVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG 236 (338)
T KOG0668|consen 166 DHELRKLRLIDWGLAEFYHPGKEY---------NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHG 236 (338)
T ss_pred chhhceeeeeecchHhhcCCCcee---------eeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCC
Confidence 95 457999999999988765432 223467789999998764 68888999999999999999998873 2
Q ss_pred chHHHHHHhh-------------hccccccCCC---------CCCC--------ChhhHHHHHHHHHHHhhhccCCCCCh
Q 003384 674 TKEVQYALDT-------------GKLKNLLDPL---------AGDW--------PFVQAEQLANLAMRCCEMSRKSRPEL 723 (824)
Q Consensus 674 ~~~~~~~~~~-------------~~~~~~ld~~---------~~~~--------p~~~~~~l~~Li~~Cl~~~P~~RPt~ 723 (824)
.+...+.+.. ++..-.++|. ...| .....++..+|+...|..|-.+|||.
T Consensus 237 ~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTa 316 (338)
T KOG0668|consen 237 HDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTA 316 (338)
T ss_pred CCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccch
Confidence 2221111110 1111112221 1111 11224678899999999999999998
Q ss_pred HH
Q 003384 724 GK 725 (824)
Q Consensus 724 ~~ 725 (824)
.+
T Consensus 317 kE 318 (338)
T KOG0668|consen 317 KE 318 (338)
T ss_pred HH
Confidence 43
No 391
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.95 E-value=8.5e-29 Score=263.15 Aligned_cols=248 Identities=27% Similarity=0.365 Sum_probs=187.6
Q ss_pred cCCCCccceeeecCceEEEEEEECC--eEEEEEEecCCCCCCchhHHHHHHHHHhcC--CCc----eeeEecccC--Cce
Q 003384 463 THNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQEIDILSKIR--HPN----LVTLVGACP--EVW 532 (824)
Q Consensus 463 ~~~f~~~~~LG~G~fG~Vykg~~~~--~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~--Hpn----Iv~L~g~~~--~~~ 532 (824)
+.+|.+..++|+|.||.|-...++. ..||||+++..... .+...-|+++|.++. .|+ +|.+.++|+ ...
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kY-reAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghi 166 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKY-REAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHI 166 (415)
T ss_pred ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHHH-hhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCce
Confidence 6689999999999999999988764 68999998754321 334667999999994 233 677777774 568
Q ss_pred EEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecC--------------
Q 003384 533 TLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDA-------------- 598 (824)
Q Consensus 533 ~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~-------------- 598 (824)
+||+|.+ |-|+.++|.. ++..+++...+..|+.|++++++|||+ .+++|.||||+|||+-.
T Consensus 167 Civfell-G~S~~dFlk~-N~y~~fpi~~ir~m~~QL~~sv~fLh~---~kl~HTDLKPENILfvss~~~~~~~~k~~~~ 241 (415)
T KOG0671|consen 167 CIVFELL-GLSTFDFLKE-NNYIPFPIDHIRHMGYQLLESVAFLHD---LKLTHTDLKPENILFVSSEYFKTYNPKKKVC 241 (415)
T ss_pred EEEEecc-ChhHHHHhcc-CCccccchHHHHHHHHHHHHHHHHHHh---cceeecCCChheEEEeccceEEEeccCCccc
Confidence 8999998 6699999953 355789999999999999999999999 88999999999999932
Q ss_pred ------CCcceeeccccccccccccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCC
Q 003384 599 ------NFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALG 672 (824)
Q Consensus 599 ------~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~ 672 (824)
+..+||+|||.|.+..+.. ...+.|..|.|||++.+-+++.++||||+||||+|+.||...|.
T Consensus 242 ~~r~~ks~~I~vIDFGsAtf~~e~h-----------s~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFq 310 (415)
T KOG0671|consen 242 FIRPLKSTAIKVIDFGSATFDHEHH-----------STIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQ 310 (415)
T ss_pred eeccCCCcceEEEecCCcceeccCc-----------ceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecc
Confidence 3457999999988655443 23457999999999999999999999999999999999999886
Q ss_pred CchHHHH-HHhhhcc-------------ccccCCCCCCCC-------------------------hhhHHHHHHHHHHHh
Q 003384 673 ITKEVQY-ALDTGKL-------------KNLLDPLAGDWP-------------------------FVQAEQLANLAMRCC 713 (824)
Q Consensus 673 ~~~~~~~-~~~~~~~-------------~~~ld~~~~~~p-------------------------~~~~~~l~~Li~~Cl 713 (824)
..+..+- ++.+..+ ...+.....+|| .....+|.+|+.++|
T Consensus 311 tHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL 390 (415)
T KOG0671|consen 311 THENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRML 390 (415)
T ss_pred cCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHH
Confidence 5432110 1100000 000000011111 123457999999999
Q ss_pred hhccCCCCChHHHH
Q 003384 714 EMSRKSRPELGKDV 727 (824)
Q Consensus 714 ~~~P~~RPt~~~~v 727 (824)
..||.+|+|+.+.+
T Consensus 391 ~fDP~~RiTl~EAL 404 (415)
T KOG0671|consen 391 EFDPARRITLREAL 404 (415)
T ss_pred ccCccccccHHHHh
Confidence 99999999996554
No 392
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.95 E-value=7.1e-29 Score=277.61 Aligned_cols=249 Identities=28% Similarity=0.362 Sum_probs=205.8
Q ss_pred cCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCCchhHHHHHHHHHhcCCCceeeEeccc--CCceEEEEEe
Q 003384 463 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEY 538 (824)
Q Consensus 463 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~--~~~~~LV~Ey 538 (824)
..+|.....+|.|.||.|||+++. +...|+|+++.....+...+++|+-+++..+|||||.++|.+ .+..++.|||
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEy 93 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEY 93 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEe
Confidence 457889999999999999999875 578999999988777778899999999999999999999988 4678999999
Q ss_pred cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccc
Q 003384 539 LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEI 618 (824)
Q Consensus 539 ~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~ 618 (824)
|.||+|.+..+ ...+|++.++..++.+..+||+|||+ +|-+|||||-.|||++..|.+|++|||.+..+.
T Consensus 94 cgggslQdiy~---~TgplselqiayvcRetl~gl~ylhs---~gk~hRdiKGanilltd~gDvklaDfgvsaqit---- 163 (829)
T KOG0576|consen 94 CGGGSLQDIYH---VTGPLSELQIAYVCRETLQGLKYLHS---QGKIHRDIKGANILLTDEGDVKLADFGVSAQIT---- 163 (829)
T ss_pred cCCCcccceee---ecccchhHHHHHHHhhhhccchhhhc---CCcccccccccceeecccCceeecccCchhhhh----
Confidence 99999999874 46789999999999999999999999 889999999999999999999999999876543
Q ss_pred cCCCccccccCCCCCCcccCChhhh---ccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCC
Q 003384 619 SSNNTTLCCRTDPKGTFAYMDPEFL---ASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAG 695 (824)
Q Consensus 619 ~~~~~~~~~~~~~~GT~~Y~APE~l---~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~ 695 (824)
.+...+....||+.|||||+. ..+.|...+|||++|+...|+---+||.-.....+..... ....++|...
T Consensus 164 ----ati~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~Lm--TkS~~qpp~l 237 (829)
T KOG0576|consen 164 ----ATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLM--TKSGFQPPTL 237 (829)
T ss_pred ----hhhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHh--hccCCCCCcc
Confidence 233445678899999999986 3578999999999999999999988886443333222111 1223344333
Q ss_pred CCChhhHHHHHHHHHHHhhhccCCCCChHHHH
Q 003384 696 DWPFVQAEQLANLAMRCCEMSRKSRPELGKDV 727 (824)
Q Consensus 696 ~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v 727 (824)
.-+......+.+|++.|+..+|++||+..+.+
T Consensus 238 kDk~kws~~fh~fvK~altknpKkRptaeklL 269 (829)
T KOG0576|consen 238 KDKTKWSEFFHNFVKGALTKNPKKRPTAEKLL 269 (829)
T ss_pred cCCccchHHHHHHHHHHhcCCCccCCChhhhe
Confidence 33445577899999999999999999985443
No 393
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.95 E-value=1.2e-27 Score=253.62 Aligned_cols=262 Identities=24% Similarity=0.378 Sum_probs=208.1
Q ss_pred hHhhhcCCCCccceeeecCceEEEEEEECC-------eEEEEEEecCCC-CCCchhHHHHHHHHHhcCCCceeeEecccC
Q 003384 458 EIEGATHNFDPSLKIGEGGYGSIYKGLLRH-------MQVAIKMLHPHS-LQGPSEFQQEIDILSKIRHPNLVTLVGACP 529 (824)
Q Consensus 458 ei~~~~~~f~~~~~LG~G~fG~Vykg~~~~-------~~VAvK~l~~~~-~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~ 529 (824)
++.....+++...++-+|.||.||.|+|+. +.|.+|.++... .-....+..|.-.+..+.|||++.+.|.+.
T Consensus 278 ~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~i 357 (563)
T KOG1024|consen 278 ELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSI 357 (563)
T ss_pred hhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEe
Confidence 344445567777789999999999997753 347778776542 223456888999999999999999999883
Q ss_pred ---CceEEEEEecCCCChhhhhh-----ccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCc
Q 003384 530 ---EVWTLVYEYLPNGSLEDRLS-----CKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFV 601 (824)
Q Consensus 530 ---~~~~LV~Ey~~ggsL~~~L~-----~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~ 601 (824)
+..+.+|.++.-|+|..+|. .......++..+...++.|++.|+.|||. ++|||.||...|.+||+...
T Consensus 358 e~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~---~~ViHkDiAaRNCvIdd~Lq 434 (563)
T KOG1024|consen 358 EDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHN---HGVIHKDIAARNCVIDDQLQ 434 (563)
T ss_pred eccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHh---cCcccchhhhhcceehhhee
Confidence 35678899999999999997 22334567788889999999999999999 89999999999999999999
Q ss_pred ceeeccccccccccccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHh-CCCCCCCchHHHHH
Q 003384 602 SKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYA 680 (824)
Q Consensus 602 vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELlt-G~~Pf~~~~~~~~~ 680 (824)
+||+|=.|++.+...+.. |...+......||+||.+.+..|+.++|||||||+||||+| |+.|+...+.++..
T Consensus 435 VkltDsaLSRDLFP~DYh------cLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~ 508 (563)
T KOG1024|consen 435 VKLTDSALSRDLFPGDYH------CLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEME 508 (563)
T ss_pred EEeccchhccccCccccc------ccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHH
Confidence 999999999976555432 22223345778999999999999999999999999999998 99999766555432
Q ss_pred HhhhccccccCCCCCCCChhhHHHHHHHHHHHhhhccCCCCChHHHHHHHHHHHH
Q 003384 681 LDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMR 735 (824)
Q Consensus 681 ~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le~l~ 735 (824)
. .+.|......|..+++++..+...||...|++||++ +.+..-|.++.
T Consensus 509 ~------ylkdGyRlaQP~NCPDeLf~vMacCWallpeeRPsf-~Qlv~cLseF~ 556 (563)
T KOG1024|consen 509 H------YLKDGYRLAQPFNCPDELFTVMACCWALLPEERPSF-SQLVICLSEFH 556 (563)
T ss_pred H------HHhccceecCCCCCcHHHHHHHHHHHhcCcccCCCH-HHHHHHHHHHH
Confidence 1 233444445688899999999999999999999999 56666665543
No 394
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.95 E-value=4.6e-28 Score=238.42 Aligned_cols=197 Identities=27% Similarity=0.363 Sum_probs=157.6
Q ss_pred CCCccceeeecCceEEEE--EEECCeEEEEEEecCCCC-CCchhHHHHHHHHHhc-CCCceeeEecccC--CceEEEEEe
Q 003384 465 NFDPSLKIGEGGYGSIYK--GLLRHMQVAIKMLHPHSL-QGPSEFQQEIDILSKI-RHPNLVTLVGACP--EVWTLVYEY 538 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vyk--g~~~~~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l-~HpnIv~L~g~~~--~~~~LV~Ey 538 (824)
....+..||+|+||.|-+ -...|+-.|+|.+...-. +..++..+|+++..+. ..|.+|.+||... ....+.||.
T Consensus 47 ~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~ 126 (282)
T KOG0984|consen 47 DLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMEL 126 (282)
T ss_pred hhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHH
Confidence 445566799999998754 445678899999876532 2345678899887665 6899999999753 357789999
Q ss_pred cCCCChhhhhhcc-CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccccc
Q 003384 539 LPNGSLEDRLSCK-DNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNE 617 (824)
Q Consensus 539 ~~ggsL~~~L~~~-~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~ 617 (824)
|. .||..+...- +.+..+++..+-+|+..+..||.|||+. ..+||||+||+||||+.+|++||||||++..+.+.-
T Consensus 127 M~-tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~k--L~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSi 203 (282)
T KOG0984|consen 127 MD-TSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSK--LSVIHRDVKPSNILINYDGQVKICDFGISGYLVDSI 203 (282)
T ss_pred hh-hhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHH--hhhhhccCCcceEEEccCCcEEEcccccceeehhhh
Confidence 84 5776655322 4456788899999999999999999995 569999999999999999999999999998776542
Q ss_pred ccCCCccccccCCCCCCcccCChhhhcc----CCCCcchhHHhHHHHHHHHHhCCCCCCC
Q 003384 618 ISSNNTTLCCRTDPKGTFAYMDPEFLAS----GELTPKSDVYSFGIILLRLLTGRPALGI 673 (824)
Q Consensus 618 ~~~~~~~~~~~~~~~GT~~Y~APE~l~~----~~~t~ksDVwSlGvvL~ELltG~~Pf~~ 673 (824)
.. +-..|...|||||.+.. ..|+.++||||||+.++||.+++.|++.
T Consensus 204 Ak---------t~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~ 254 (282)
T KOG0984|consen 204 AK---------TMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYES 254 (282)
T ss_pred HH---------HHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccc
Confidence 11 22458889999999854 3799999999999999999999999853
No 395
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.95 E-value=2.1e-26 Score=231.66 Aligned_cols=204 Identities=39% Similarity=0.605 Sum_probs=175.9
Q ss_pred eeecCceEEEEEEEC--CeEEEEEEecCCCCC-CchhHHHHHHHHHhcCCCceeeEecccCC--ceEEEEEecCCCChhh
Q 003384 472 IGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACPE--VWTLVYEYLPNGSLED 546 (824)
Q Consensus 472 LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIv~L~g~~~~--~~~LV~Ey~~ggsL~~ 546 (824)
||.|++|.||++... +..+++|++...... ....+.+|+.+++.+.|++|+++++++.. ..+++|||+.|++|.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 689999999999987 789999998765432 23579999999999999999999999854 7889999999999999
Q ss_pred hhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecC-CCcceeeccccccccccccccCCCccc
Q 003384 547 RLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDA-NFVSKLSDFGISRFLSQNEISSNNTTL 625 (824)
Q Consensus 547 ~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~-~~~vKL~DFGla~~~~~~~~~~~~~~~ 625 (824)
++.... ..+++..+..++.+++.+|.+||. .+++|+||+|.||+++. ++.++|+|||.+........
T Consensus 81 ~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~---~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~------- 148 (215)
T cd00180 81 LLKENE--GKLSEDEILRILLQILEGLEYLHS---NGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS------- 148 (215)
T ss_pred HHHhcc--CCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc-------
Confidence 985322 468899999999999999999999 79999999999999999 89999999999986654321
Q ss_pred cccCCCCCCcccCChhhhccC-CCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCCCCChhhHHH
Q 003384 626 CCRTDPKGTFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQ 704 (824)
Q Consensus 626 ~~~~~~~GT~~Y~APE~l~~~-~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~ 704 (824)
......+...|++||.+... .++.+.|+|+||+++++| ..
T Consensus 149 -~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l--------------------------------------~~ 189 (215)
T cd00180 149 -LLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL--------------------------------------PE 189 (215)
T ss_pred -hhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH--------------------------------------HH
Confidence 01234578899999999887 888999999999999999 47
Q ss_pred HHHHHHHHhhhccCCCCChHHHH
Q 003384 705 LANLAMRCCEMSRKSRPELGKDV 727 (824)
Q Consensus 705 l~~Li~~Cl~~~P~~RPt~~~~v 727 (824)
+.+++..|++.+|.+||++ .++
T Consensus 190 ~~~~l~~~l~~~p~~R~~~-~~l 211 (215)
T cd00180 190 LKDLIRKMLQKDPEKRPSA-KEI 211 (215)
T ss_pred HHHHHHHHhhCCcccCcCH-HHH
Confidence 8999999999999999998 444
No 396
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.94 E-value=4.2e-26 Score=234.27 Aligned_cols=196 Identities=37% Similarity=0.553 Sum_probs=166.9
Q ss_pred CCccceeeecCceEEEEEEECC--eEEEEEEecCCCCC-CchhHHHHHHHHHhcCCCceeeEecccC--CceEEEEEecC
Q 003384 466 FDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQ-GPSEFQQEIDILSKIRHPNLVTLVGACP--EVWTLVYEYLP 540 (824)
Q Consensus 466 f~~~~~LG~G~fG~Vykg~~~~--~~VAvK~l~~~~~~-~~~~f~~Ei~iL~~l~HpnIv~L~g~~~--~~~~LV~Ey~~ 540 (824)
|.....||.|++|.||+|...+ ..+++|.+...... ....+.+|+..+..++|+|++++++++. ...++++||++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE 80 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence 4566789999999999999864 88999999876544 4668899999999999999999999874 57889999999
Q ss_pred CCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccccC
Q 003384 541 NGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISS 620 (824)
Q Consensus 541 ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~~ 620 (824)
+++|.+++..... .+++.....++.+++.+|.+||. .+++|+||+|.||+++.++.++|+|||++.........
T Consensus 81 ~~~L~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~- 154 (225)
T smart00221 81 GGDLFDYLRKKGG--KLSEEEARFYLRQILEALEYLHS---LGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAA- 154 (225)
T ss_pred CCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccc-
Confidence 9999999853221 17889999999999999999999 79999999999999999999999999999876544200
Q ss_pred CCccccccCCCCCCcccCChhhh-ccCCCCcchhHHhHHHHHHHHHhCCCCCCC
Q 003384 621 NNTTLCCRTDPKGTFAYMDPEFL-ASGELTPKSDVYSFGIILLRLLTGRPALGI 673 (824)
Q Consensus 621 ~~~~~~~~~~~~GT~~Y~APE~l-~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~ 673 (824)
......++..|++||.+ ....++.++|||+||+++++|++|++||..
T Consensus 155 ------~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 155 ------LLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred ------cccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 01234578899999998 666788899999999999999999999965
No 397
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.94 E-value=4.2e-27 Score=259.64 Aligned_cols=192 Identities=24% Similarity=0.414 Sum_probs=163.8
Q ss_pred CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCC------CC--chhHHHHHHHHHhcC---CCceeeEecccCC-
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSL------QG--PSEFQQEIDILSKIR---HPNLVTLVGACPE- 530 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~------~~--~~~f~~Ei~iL~~l~---HpnIv~L~g~~~~- 530 (824)
+|...+.+|.|+||.|+.++++ +..|+||.+.+... .+ ...+-.|+.||..|+ |+||++++++|++
T Consensus 562 ~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEdd 641 (772)
T KOG1152|consen 562 DYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFEDD 641 (772)
T ss_pred cceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeecC
Confidence 5888999999999999999987 37799999876421 11 224667999999997 9999999999954
Q ss_pred -ceEEEEEec-CCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccc
Q 003384 531 -VWTLVYEYL-PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFG 608 (824)
Q Consensus 531 -~~~LV~Ey~-~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFG 608 (824)
.+||+||-- +|.+|.+++ ...+.+++....-|+.|++.|+++||. .||||||||-+||.++.+|.+||+|||
T Consensus 642 d~yyl~te~hg~gIDLFd~I---E~kp~m~E~eAk~IFkQV~agi~hlh~---~~ivhrdikdenvivd~~g~~klidfg 715 (772)
T KOG1152|consen 642 DYYYLETEVHGEGIDLFDFI---EFKPRMDEPEAKLIFKQVVAGIKHLHD---QGIVHRDIKDENVIVDSNGFVKLIDFG 715 (772)
T ss_pred CeeEEEecCCCCCcchhhhh---hccCccchHHHHHHHHHHHhccccccc---cCceecccccccEEEecCCeEEEeecc
Confidence 688999874 566899998 455679999999999999999999999 899999999999999999999999999
Q ss_pred cccccccccccCCCccccccCCCCCCcccCChhhhccCCC-CcchhHHhHHHHHHHHHhCCCCCC
Q 003384 609 ISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGEL-TPKSDVYSFGIILLRLLTGRPALG 672 (824)
Q Consensus 609 la~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~-t~ksDVwSlGvvL~ELltG~~Pf~ 672 (824)
.|.+.....+ ...+||..|.|||++.+..| +..-|||++|++||.++....||.
T Consensus 716 saa~~ksgpf----------d~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 716 SAAYTKSGPF----------DVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred chhhhcCCCc----------ceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 9876654432 34579999999999999876 566899999999999999998884
No 398
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.93 E-value=4.4e-28 Score=246.43 Aligned_cols=199 Identities=25% Similarity=0.395 Sum_probs=162.5
Q ss_pred CCCccceeeecCceEEEEEEEC--CeEEEEEEecCC--CCCCchhHHHHHHHHHhcCCCceeeEecccCC-------ceE
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPH--SLQGPSEFQQEIDILSKIRHPNLVTLVGACPE-------VWT 533 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~--~~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~~-------~~~ 533 (824)
+.++.+.||-|+||.||..++. ++.||+|++... ....-+.+.+|+.+|.-++|.|++..+++... ..|
T Consensus 54 Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiY 133 (449)
T KOG0664|consen 54 DIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELY 133 (449)
T ss_pred cCCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHH
Confidence 4567788999999999998875 588999987542 22234578899999999999999999887632 356
Q ss_pred EEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccc
Q 003384 534 LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFL 613 (824)
Q Consensus 534 LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~ 613 (824)
.|.|+|. .+|..++. ...+|+-..+.-+..||++||.|||+ .+|+||||||.|+|++.|..+||+||||++..
T Consensus 134 V~TELmQ-SDLHKIIV---SPQ~Ls~DHvKVFlYQILRGLKYLHs---A~ILHRDIKPGNLLVNSNCvLKICDFGLARve 206 (449)
T KOG0664|consen 134 VLTELMQ-SDLHKIIV---SPQALTPDHVKVFVYQILRGLKYLHT---ANILHRDIKPGNLLVNSNCILKICDFGLARTW 206 (449)
T ss_pred HHHHHHH-hhhhheec---cCCCCCcchhhhhHHHHHhhhHHHhh---cchhhccCCCccEEeccCceEEeccccccccc
Confidence 7888884 57888773 44568888888899999999999999 88999999999999999999999999999976
Q ss_pred ccccccCCCccccccCCCCCCcccCChhhhccC-CCCcchhHHhHHHHHHHHHhCCCCCCCchHH
Q 003384 614 SQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLTGRPALGITKEV 677 (824)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~ 677 (824)
........ +..+-|..|.|||++++. .|+.+.||||.|||+.||+..+..|...+.+
T Consensus 207 e~d~~~hM-------TqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~Pi 264 (449)
T KOG0664|consen 207 DQRDRLNM-------THEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPI 264 (449)
T ss_pred chhhhhhh-------HHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChH
Confidence 65542221 233458899999999985 7999999999999999999999888654443
No 399
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.93 E-value=1.5e-26 Score=252.26 Aligned_cols=198 Identities=25% Similarity=0.333 Sum_probs=166.3
Q ss_pred hcCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCCchhHHHHHHHHHhcC------CCceeeEeccc--CCc
Q 003384 462 ATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIR------HPNLVTLVGAC--PEV 531 (824)
Q Consensus 462 ~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~------HpnIv~L~g~~--~~~ 531 (824)
....|.+....|+|-|++|.+|.+. +..||||++...... .+.=..|++||++|+ --|+++|+-.| ..+
T Consensus 430 LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M-~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknH 508 (752)
T KOG0670|consen 430 LDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVM-HKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNH 508 (752)
T ss_pred hcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHH-hhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcce
Confidence 3456777778899999999999875 578999999765322 234568999999995 34789998877 467
Q ss_pred eEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCC-Ccceeeccccc
Q 003384 532 WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDAN-FVSKLSDFGIS 610 (824)
Q Consensus 532 ~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~-~~vKL~DFGla 610 (824)
+|||+|-+ ..+|.++|...+....|....+..++.|++-||..|.. -||+|.||||+|||++++ ..+||||||.|
T Consensus 509 LClVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~---c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA 584 (752)
T KOG0670|consen 509 LCLVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKK---CGVLHADIKPDNILVNESKNILKLCDFGSA 584 (752)
T ss_pred eEEEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHh---cCeeecccCccceEeccCcceeeeccCccc
Confidence 99999988 46999999877777788889999999999999999999 579999999999999875 57899999999
Q ss_pred cccccccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCc
Q 003384 611 RFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGIT 674 (824)
Q Consensus 611 ~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~ 674 (824)
.....++.... .-+..|.|||++.+..|+...|+||.||+||||.||+..|.+.
T Consensus 585 ~~~~eneitPY----------LVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~ 638 (752)
T KOG0670|consen 585 SFASENEITPY----------LVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGR 638 (752)
T ss_pred cccccccccHH----------HHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCC
Confidence 87776653322 1356799999999999999999999999999999999988654
No 400
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.93 E-value=8.6e-26 Score=235.44 Aligned_cols=242 Identities=21% Similarity=0.272 Sum_probs=183.5
Q ss_pred CCCCccceeeecCceEEEEEEE--CCeEEEEEEecCC--CCCCchhHHHHHHHHHhcCCCceeeEecccCC--------c
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLL--RHMQVAIKMLHPH--SLQGPSEFQQEIDILSKIRHPNLVTLVGACPE--------V 531 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~--~~~~VAvK~l~~~--~~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~~--------~ 531 (824)
.+|.....+|.|.- .|..+.+ .+.+||+|.+... .....+...+|..++..++|+||++++.+|.. .
T Consensus 17 ~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e 95 (369)
T KOG0665|consen 17 KRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQE 95 (369)
T ss_pred eeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHh
Confidence 46777778898888 5555544 3789999987543 22334568899999999999999999999832 4
Q ss_pred eEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccc
Q 003384 532 WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISR 611 (824)
Q Consensus 532 ~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~ 611 (824)
+|+|||||. ++|...+. ..++-.+...|+.|+++|+.|||+ .||+||||||+||++..+..+||.|||+|+
T Consensus 96 ~y~v~e~m~-~nl~~vi~-----~elDH~tis~i~yq~~~~ik~lhs---~~IihRdLkPsnivv~~~~~lKi~dfg~ar 166 (369)
T KOG0665|consen 96 VYLVMELMD-ANLCQVIL-----MELDHETISYILYQMLCGIKHLHS---AGIIHRDLKPSNIVVNSDCTLKILDFGLAR 166 (369)
T ss_pred HHHHHHhhh-hHHHHHHH-----HhcchHHHHHHHHHHHHHHHHHHh---cceeecccCcccceecchhheeeccchhhc
Confidence 789999995 58888774 346667889999999999999999 899999999999999999999999999998
Q ss_pred ccccccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHh---------
Q 003384 612 FLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALD--------- 682 (824)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~--------- 682 (824)
..... ...+..+.|..|.|||++.+-+|...+||||+||++.||++|...|.+.+.+.....
T Consensus 167 ~e~~~---------~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd 237 (369)
T KOG0665|consen 167 TEDTD---------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPD 237 (369)
T ss_pred ccCcc---------cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCC
Confidence 54332 112445679999999999998899999999999999999999988865433221110
Q ss_pred ---------hh-------------cccccc-C---CCCCCCChhhHHHHHHHHHHHhhhccCCCCChH
Q 003384 683 ---------TG-------------KLKNLL-D---PLAGDWPFVQAEQLANLAMRCCEMSRKSRPELG 724 (824)
Q Consensus 683 ---------~~-------------~~~~~l-d---~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~ 724 (824)
.+ .+...+ | +...+.+...+..+.+++.+||-.+|++|.+..
T Consensus 238 ~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~ 305 (369)
T KOG0665|consen 238 PSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVD 305 (369)
T ss_pred HHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHH
Confidence 00 000111 0 011111223356789999999999999999983
No 401
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.92 E-value=2.2e-25 Score=240.24 Aligned_cols=199 Identities=28% Similarity=0.430 Sum_probs=162.0
Q ss_pred cCCCCccceeeecCceEEEEEEEC-----CeEEEEEEecCCCCCCchhHHHHHHHHHhcC-CCceeeEeccc--CCceEE
Q 003384 463 THNFDPSLKIGEGGYGSIYKGLLR-----HMQVAIKMLHPHSLQGPSEFQQEIDILSKIR-HPNLVTLVGAC--PEVWTL 534 (824)
Q Consensus 463 ~~~f~~~~~LG~G~fG~Vykg~~~-----~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~-HpnIv~L~g~~--~~~~~L 534 (824)
.+.|....+||.|.|++||++++. +..||+|.+... ..+..+.+|+++|..+. +.||+++.+++ .+...+
T Consensus 35 ~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~t--s~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~i 112 (418)
T KOG1167|consen 35 SNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRT--SSPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQVAI 112 (418)
T ss_pred hhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccc--cCchHHHHHHHHHHHhccchhhhcchhhhccCCeeEE
Confidence 346788889999999999999754 367999998764 34678999999999995 99999999998 567899
Q ss_pred EEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecC-CCcceeecccccccc
Q 003384 535 VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDA-NFVSKLSDFGISRFL 613 (824)
Q Consensus 535 V~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~-~~~vKL~DFGla~~~ 613 (824)
|+||+++....+++. .++...+..++..++.||.++|. +|||||||||+|||.+. -+.-.|.|||||...
T Consensus 113 vlp~~~H~~f~~l~~------~l~~~~i~~Yl~~ll~Al~~~h~---~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~ 183 (418)
T KOG1167|consen 113 VLPYFEHDRFRDLYR------SLSLAEIRWYLRNLLKALAHLHK---NGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRY 183 (418)
T ss_pred EecccCccCHHHHHh------cCCHHHHHHHHHHHHHHhhhhhc---cCccccCCCccccccccccCCceEEechhHHHH
Confidence 999999999999883 36678999999999999999999 99999999999999985 467789999999722
Q ss_pred cccc------------ccC------------------------CCccccccCCCCCCcccCChhhhcc-CCCCcchhHHh
Q 003384 614 SQNE------------ISS------------------------NNTTLCCRTDPKGTFAYMDPEFLAS-GELTPKSDVYS 656 (824)
Q Consensus 614 ~~~~------------~~~------------------------~~~~~~~~~~~~GT~~Y~APE~l~~-~~~t~ksDVwS 656 (824)
.... ... +...........||++|.|||++.. +..++++||||
T Consensus 184 d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws 263 (418)
T KOG1167|consen 184 DGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWS 263 (418)
T ss_pred HhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceee
Confidence 1100 000 0000112335589999999999876 46889999999
Q ss_pred HHHHHHHHHhCCCCCC
Q 003384 657 FGIILLRLLTGRPALG 672 (824)
Q Consensus 657 lGvvL~ELltG~~Pf~ 672 (824)
.||||+-+++++.||-
T Consensus 264 ~GVI~Lslls~~~PFf 279 (418)
T KOG1167|consen 264 AGVILLSLLSRRYPFF 279 (418)
T ss_pred ccceeehhhccccccc
Confidence 9999999999999984
No 402
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.92 E-value=2.5e-24 Score=234.43 Aligned_cols=130 Identities=23% Similarity=0.336 Sum_probs=107.7
Q ss_pred cCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCCchhHHHHHHHHHhcC-----C---CceeeEecccC---
Q 003384 463 THNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIR-----H---PNLVTLVGACP--- 529 (824)
Q Consensus 463 ~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~-----H---pnIv~L~g~~~--- 529 (824)
..+|-..++||.|-|++||++.+. .+.||+|+.+.... -.+....||.+|++++ | .+||+|++.|.
T Consensus 77 ~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqh-YtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsG 155 (590)
T KOG1290|consen 77 GGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQH-YTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSG 155 (590)
T ss_pred CceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhH-HHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecC
Confidence 457889999999999999999886 47899999875432 2345678999999983 3 46999999982
Q ss_pred ---CceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEec
Q 003384 530 ---EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLD 597 (824)
Q Consensus 530 ---~~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld 597 (824)
.+.++|+|++ |.+|..++.... ...++...+..|+.||+.||.|||.. -||||.||||+||||.
T Consensus 156 pNG~HVCMVfEvL-GdnLLklI~~s~-YrGlpl~~VK~I~~qvL~GLdYLH~e--cgIIHTDlKPENvLl~ 222 (590)
T KOG1290|consen 156 PNGQHVCMVFEVL-GDNLLKLIKYSN-YRGLPLSCVKEICRQVLTGLDYLHRE--CGIIHTDLKPENVLLC 222 (590)
T ss_pred CCCcEEEEEehhh-hhHHHHHHHHhC-CCCCcHHHHHHHHHHHHHHHHHHHHh--cCccccCCCcceeeee
Confidence 3689999999 778888886543 45588999999999999999999995 4799999999999994
No 403
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.91 E-value=7e-25 Score=269.11 Aligned_cols=199 Identities=16% Similarity=0.187 Sum_probs=138.8
Q ss_pred hcCC-CceeeEeccc---------CCceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCce
Q 003384 515 KIRH-PNLVTLVGAC---------PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI 584 (824)
Q Consensus 515 ~l~H-pnIv~L~g~~---------~~~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~gi 584 (824)
.++| +||++++++| .+.++++|||+ +++|.++|.. ....+++..++.|+.||+.||.|||+ +||
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~--~~~~~~~~~~~~i~~qi~~al~~lH~---~gI 101 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDN--PDRSVDAFECFHVFRQIVEIVNAAHS---QGI 101 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhc--ccccccHHHHHHHHHHHHHHHHHHHh---CCe
Confidence 4556 5888888877 12466788887 6699999952 23569999999999999999999999 899
Q ss_pred EeccccCCcEEecC-------------------CCcceeecccccccccccccc--------CCCccccccCCCCCCccc
Q 003384 585 VHGDLKPANILLDA-------------------NFVSKLSDFGISRFLSQNEIS--------SNNTTLCCRTDPKGTFAY 637 (824)
Q Consensus 585 iHrDLKp~NILld~-------------------~~~vKL~DFGla~~~~~~~~~--------~~~~~~~~~~~~~GT~~Y 637 (824)
|||||||+||||+. ++.+||+|||+++........ .............||+.|
T Consensus 102 vHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y 181 (793)
T PLN00181 102 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWY 181 (793)
T ss_pred eeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcce
Confidence 99999999999954 445666666666542210000 000000001224689999
Q ss_pred CChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCCCCChhhHHHHHHHHHHHhhhcc
Q 003384 638 MDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSR 717 (824)
Q Consensus 638 ~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~P 717 (824)
||||++.+..|+.++|||||||+||||++|.+|+.........+... .+.+ ...........++.+||+.+|
T Consensus 182 ~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~~~~~~~~~----~~~~----~~~~~~~~~~~~~~~~L~~~P 253 (793)
T PLN00181 182 TSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSRTMSSLRHR----VLPP----QILLNWPKEASFCLWLLHPEP 253 (793)
T ss_pred EChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHHHHHHHHHh----hcCh----hhhhcCHHHHHHHHHhCCCCh
Confidence 99999999999999999999999999999999985432221111111 1111 011123356788899999999
Q ss_pred CCCCChHHHH
Q 003384 718 KSRPELGKDV 727 (824)
Q Consensus 718 ~~RPt~~~~v 727 (824)
.+||++.+.+
T Consensus 254 ~~Rps~~eil 263 (793)
T PLN00181 254 SCRPSMSELL 263 (793)
T ss_pred hhCcChHHHh
Confidence 9999995543
No 404
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.90 E-value=1.2e-22 Score=223.64 Aligned_cols=263 Identities=23% Similarity=0.288 Sum_probs=195.3
Q ss_pred CCCccceeeecCceEEEEEEECC---eEEEEEEecCCCCCCchhHHHHHHHHHhcCC----CceeeEeccc---CCceEE
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLRH---MQVAIKMLHPHSLQGPSEFQQEIDILSKIRH----PNLVTLVGAC---PEVWTL 534 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~~---~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~H----pnIv~L~g~~---~~~~~L 534 (824)
+|.+.++||+|+||.||.|.... ..+|+|............+..|+.++..+.. +++..+++.. ....++
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i 98 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI 98 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence 79999999999999999998765 3689998776544433478899999999973 5788887766 235789
Q ss_pred EEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCC-----Ccceeecccc
Q 003384 535 VYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDAN-----FVSKLSDFGI 609 (824)
Q Consensus 535 V~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~-----~~vKL~DFGl 609 (824)
||+.+ |.+|.++..... ...++..+.+.|+.|++.+|.+||+ .|+|||||||+|+++... ..+.|.|||+
T Consensus 99 VM~l~-G~sL~dl~~~~~-~~~fs~~T~l~ia~q~l~~l~~lH~---~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGl 173 (322)
T KOG1164|consen 99 VMSLL-GPSLEDLRKRNP-PGRFSRKTVLRIAIQNLNALEDLHS---KGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGL 173 (322)
T ss_pred EEecc-CccHHHHHHhCC-CCCcCHhHHHHHHHHHHHHHHHHHh---cCcccCCcCHHHeeecCCCCcccceEEEEecCC
Confidence 99988 889999874443 5679999999999999999999999 899999999999999865 4689999999
Q ss_pred cc--ccccccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHH--HHHHhhhc
Q 003384 610 SR--FLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEV--QYALDTGK 685 (824)
Q Consensus 610 a~--~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~--~~~~~~~~ 685 (824)
++ .+...................||..|+++.+..+...+.+.|+||++.++.+|+.|..||...... ...+....
T Consensus 174 ar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~ 253 (322)
T KOG1164|consen 174 ARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDP 253 (322)
T ss_pred CccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHh
Confidence 99 332222111011100013456999999999999999999999999999999999999999543321 11111111
Q ss_pred cccccCCCCCCCChhhHHHHHHHHHHHhhhccCCCCChHHHHHHHHHHHHhh
Q 003384 686 LKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPMRAS 737 (824)
Q Consensus 686 ~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le~l~~~ 737 (824)
....... .....+..+..+...+-..+...+|.+ ..+...|......
T Consensus 254 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~Pdy-~~~~~~l~~~~~~ 300 (322)
T KOG1164|consen 254 RKLLTDR----FGDLKPEEFAKILEYIDSLDYEDKPDY-EKLAELLKDVFDS 300 (322)
T ss_pred hhhcccc----ccCCChHHHHHHHHHhhccCCcCCCCH-HHHHHHHHHHHHh
Confidence 1111111 223345677888888888999999999 6666666665443
No 405
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.90 E-value=2.8e-23 Score=207.23 Aligned_cols=165 Identities=22% Similarity=0.259 Sum_probs=123.3
Q ss_pred CChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccccCC
Q 003384 542 GSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSN 621 (824)
Q Consensus 542 gsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~~~ 621 (824)
|+|.+++... ..++++..++.|+.|++.||.|||+ ++ ||+|||++.++.+|+ ||++......
T Consensus 1 GsL~~~l~~~--~~~l~~~~~~~i~~qi~~~L~~lH~---~~------kp~Nil~~~~~~~~~--fG~~~~~~~~----- 62 (176)
T smart00750 1 VSLADILEVR--GRPLNEEEIWAVCLQCLRALRELHR---QA------KSGNILLTWDGLLKL--DGSVAFKTPE----- 62 (176)
T ss_pred CcHHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHh---cC------CcccEeEcCccceee--ccceEeeccc-----
Confidence 7899998532 4569999999999999999999999 44 999999999999999 9998765432
Q ss_pred CccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhh--hccccccCCCCCCCCh
Q 003384 622 NTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDT--GKLKNLLDPLAGDWPF 699 (824)
Q Consensus 622 ~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~--~~~~~~ld~~~~~~p~ 699 (824)
...||+.|+|||++.+..++.++|||||||++|||+||++||............ ..... ..+.....+.
T Consensus 63 --------~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 133 (176)
T smart00750 63 --------QSRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPA-DDPRDRSNLE 133 (176)
T ss_pred --------cCCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhcc-CCccccccHH
Confidence 124899999999999999999999999999999999999999654332111111 00111 1111111122
Q ss_pred hhHH--HHHHHHHHHhhhccCCCCChHHHHHHHHHHH
Q 003384 700 VQAE--QLANLAMRCCEMSRKSRPELGKDVWRVLEPM 734 (824)
Q Consensus 700 ~~~~--~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le~l 734 (824)
.... .+.+++.+||+.+|.+||++ .+++..+..+
T Consensus 134 ~~~~~~~~~~~i~~cl~~~p~~Rp~~-~~ll~~~~~~ 169 (176)
T smart00750 134 SVSAARSFADFMRVCASRLPQRREAA-NHYLAHCRAL 169 (176)
T ss_pred HHHhhhhHHHHHHHHHhcccccccCH-HHHHHHHHHH
Confidence 2233 69999999999999999999 5565555443
No 406
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.90 E-value=4.8e-24 Score=217.51 Aligned_cols=234 Identities=22% Similarity=0.326 Sum_probs=172.4
Q ss_pred CCCCccceeeecCceEEEEEEECC--eEEEEEEecCCCCCCchhHHHHHHHHHhc-CCCceeeEecc-c--CCceEEEEE
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQGPSEFQQEIDILSKI-RHPNLVTLVGA-C--PEVWTLVYE 537 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~~~--~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l-~HpnIv~L~g~-~--~~~~~LV~E 537 (824)
..|++.+.||+|.||.+..+.+++ +.+++|.+.... ....+|.+|..---.| .|.||+.-|+. | .+.++.++|
T Consensus 24 d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~-tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE 102 (378)
T KOG1345|consen 24 DVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ-TTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQE 102 (378)
T ss_pred hhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcch-hhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeec
Confidence 468999999999999999999885 679999886543 3456899988765555 48999988764 3 356778999
Q ss_pred ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEe-c-CCCcceeecccccccccc
Q 003384 538 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILL-D-ANFVSKLSDFGISRFLSQ 615 (824)
Q Consensus 538 y~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILl-d-~~~~vKL~DFGla~~~~~ 615 (824)
|+|.|+|..-+. ...+.+....+++.|++.||.|+|+ +++||||||.+|||| + +...+||||||+.+....
T Consensus 103 ~aP~gdL~snv~----~~GigE~~~K~v~~ql~SAi~fMHs---knlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~ 175 (378)
T KOG1345|consen 103 FAPRGDLRSNVE----AAGIGEANTKKVFAQLLSAIEFMHS---KNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGT 175 (378)
T ss_pred cCccchhhhhcC----cccccHHHHHHHHHHHHHHHHHhhc---cchhhcccccceEEEecCCccEEEeeecccccccCc
Confidence 999999998773 2346777888999999999999999 899999999999999 3 345899999999874432
Q ss_pred ccccCCCccccccCCCCCCcccCChhhhccC-----CCCcchhHHhHHHHHHHHHhCCCCCCCc-----hHH-HHHHhhh
Q 003384 616 NEISSNNTTLCCRTDPKGTFAYMDPEFLASG-----ELTPKSDVYSFGIILLRLLTGRPALGIT-----KEV-QYALDTG 684 (824)
Q Consensus 616 ~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-----~~t~ksDVwSlGvvL~ELltG~~Pf~~~-----~~~-~~~~~~~ 684 (824)
.. ....-+..|.+||..... ...+.+|||.||+|+|.++||.+||... ... ...+..+
T Consensus 176 tV-----------~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~r 244 (378)
T KOG1345|consen 176 TV-----------KYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKR 244 (378)
T ss_pred ee-----------hhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcc
Confidence 11 112246679999977542 2467899999999999999999999621 111 1112222
Q ss_pred ccccccCCCCCCCChhhHHHHHHHHHHHhhhccCCCC
Q 003384 685 KLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRP 721 (824)
Q Consensus 685 ~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RP 721 (824)
... ..+......++.+..+..+-+..+|++|=
T Consensus 245 k~~-----~~P~~F~~fs~~a~r~Fkk~lt~~~~drc 276 (378)
T KOG1345|consen 245 KNP-----ALPKKFNPFSEKALRLFKKSLTPRFKDRC 276 (378)
T ss_pred cCc-----cCchhhcccCHHHHHHHHHhcCCcccccc
Confidence 221 11111222345677888888888998883
No 407
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.89 E-value=3.7e-23 Score=229.24 Aligned_cols=172 Identities=16% Similarity=0.120 Sum_probs=130.4
Q ss_pred hhhcCCCCccceeeecCceEEEEEEEC---CeEEEEEEecCCCC-----CCchhHHHHHHHHHhcCCCceee-EecccCC
Q 003384 460 EGATHNFDPSLKIGEGGYGSIYKGLLR---HMQVAIKMLHPHSL-----QGPSEFQQEIDILSKIRHPNLVT-LVGACPE 530 (824)
Q Consensus 460 ~~~~~~f~~~~~LG~G~fG~Vykg~~~---~~~VAvK~l~~~~~-----~~~~~f~~Ei~iL~~l~HpnIv~-L~g~~~~ 530 (824)
......|.....||+|+||+||+|.+. +..||||++..... .....|.+|+++|+.++|+|++. +++. .
T Consensus 14 ~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~--~ 91 (365)
T PRK09188 14 PALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT--G 91 (365)
T ss_pred ccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc--C
Confidence 345567999999999999999999874 46689998753311 11345899999999999999985 5443 4
Q ss_pred ceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccc-cCCcEEecCCCcceeecccc
Q 003384 531 VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDL-KPANILLDANFVSKLSDFGI 609 (824)
Q Consensus 531 ~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDL-Kp~NILld~~~~vKL~DFGl 609 (824)
..+|||||++|++|.... . .. ...++.+++.||.|||+ +||+|||| ||+|||++.++.+||+|||+
T Consensus 92 ~~~LVmE~~~G~~L~~~~---~----~~---~~~~~~~i~~aL~~lH~---~gIiHrDL~KP~NILv~~~~~ikLiDFGl 158 (365)
T PRK09188 92 KDGLVRGWTEGVPLHLAR---P----HG---DPAWFRSAHRALRDLHR---AGITHNDLAKPQNWLMGPDGEAAVIDFQL 158 (365)
T ss_pred CcEEEEEccCCCCHHHhC---c----cc---hHHHHHHHHHHHHHHHH---CCCeeCCCCCcceEEEcCCCCEEEEECcc
Confidence 578999999999996321 1 11 14678899999999999 89999999 99999999999999999999
Q ss_pred ccccccccccCCCccccccCCCCCCcccCChhhhccC
Q 003384 610 SRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG 646 (824)
Q Consensus 610 a~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 646 (824)
|+.+..............-....|++.|+|||++...
T Consensus 159 A~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~ 195 (365)
T PRK09188 159 ASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPR 195 (365)
T ss_pred ceecccCcchhhhhhhhhhhhhhccCccCCcccCChh
Confidence 9987654322221111111356789999999998653
No 408
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.88 E-value=3e-23 Score=211.29 Aligned_cols=248 Identities=23% Similarity=0.403 Sum_probs=195.3
Q ss_pred CCccceeeecCceEEEEEEECCeEEEEEEecCCCCCC--chhHHHHHHHHHhcCCCceeeEeccc--CCceEEEEEecCC
Q 003384 466 FDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQG--PSEFQQEIDILSKIRHPNLVTLVGAC--PEVWTLVYEYLPN 541 (824)
Q Consensus 466 f~~~~~LG~G~fG~Vykg~~~~~~VAvK~l~~~~~~~--~~~f~~Ei~iL~~l~HpnIv~L~g~~--~~~~~LV~Ey~~g 541 (824)
.+...+|.+...|+.|+|++.+..+++|+++...... ...|..|.-.|+-+.||||+.++|.| +....++..||+.
T Consensus 192 lnl~tkl~e~hsgelwrgrwqgndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~ 271 (448)
T KOG0195|consen 192 LNLITKLAESHSGELWRGRWQGNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPF 271 (448)
T ss_pred hhhhhhhccCCCcccccccccCcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccc
Confidence 3455678899999999999999999999987654332 35799999999999999999999999 4568899999999
Q ss_pred CChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccccCC
Q 003384 542 GSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSN 621 (824)
Q Consensus 542 gsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~~~ 621 (824)
|||+..|+.. .....+..+..+++.++++|++|||+..+. |.---|.+..|++|++.+++|+= +-+++ +..
T Consensus 272 gslynvlhe~-t~vvvd~sqav~faldiargmaflhslep~-ipr~~lns~hvmidedltarism-ad~kf------sfq 342 (448)
T KOG0195|consen 272 GSLYNVLHEQ-TSVVVDHSQAVRFALDIARGMAFLHSLEPM-IPRFYLNSKHVMIDEDLTARISM-ADTKF------SFQ 342 (448)
T ss_pred hHHHHHHhcC-ccEEEecchHHHHHHHHHhhHHHHhhcchh-hhhhhcccceEEecchhhhheec-cccee------eee
Confidence 9999999644 334566778999999999999999998752 34447899999999999888742 11111 100
Q ss_pred CccccccCCCCCCcccCChhhhccCCCC---cchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCCCCC
Q 003384 622 NTTLCCRTDPKGTFAYMDPEFLASGELT---PKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWP 698 (824)
Q Consensus 622 ~~~~~~~~~~~GT~~Y~APE~l~~~~~t---~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p 698 (824)
..+..-.|.||+||.+...+-+ .++|+|||+++||||.|...||..-...+..+. -.++.+....|
T Consensus 343 ------e~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmk-----ialeglrv~ip 411 (448)
T KOG0195|consen 343 ------EVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMK-----IALEGLRVHIP 411 (448)
T ss_pred ------ccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhh-----hhhccccccCC
Confidence 0223458899999999876543 468999999999999999999976655544332 23445556677
Q ss_pred hhhHHHHHHHHHHHhhhccCCCCChHHHHHHHHHHH
Q 003384 699 FVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM 734 (824)
Q Consensus 699 ~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le~l 734 (824)
...+..+.+|+.-|++.||.+||.+ ..++.+|+.+
T Consensus 412 pgis~hm~klm~icmnedpgkrpkf-dmivpilekm 446 (448)
T KOG0195|consen 412 PGISRHMNKLMNICMNEDPGKRPKF-DMIVPILEKM 446 (448)
T ss_pred CCccHHHHHHHHHHhcCCCCcCCCc-ceehhhHHHh
Confidence 8888999999999999999999999 7788888875
No 409
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.88 E-value=6e-21 Score=202.79 Aligned_cols=258 Identities=33% Similarity=0.475 Sum_probs=192.4
Q ss_pred CCccceeeecCceEEEEEEECCeEEEEEEecCCCCCC---chhHHHHHHHHHhcCCC-ceeeEecccCC--ceEEEEEec
Q 003384 466 FDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQG---PSEFQQEIDILSKIRHP-NLVTLVGACPE--VWTLVYEYL 539 (824)
Q Consensus 466 f~~~~~LG~G~fG~Vykg~~~~~~VAvK~l~~~~~~~---~~~f~~Ei~iL~~l~Hp-nIv~L~g~~~~--~~~LV~Ey~ 539 (824)
|.....||.|+||.||++... ..+++|.+....... ...+.+|+.++..+.|+ +|+++++.+.. ..+++++|+
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~-~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 80 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR-KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEYV 80 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec-cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEecC
Confidence 566778999999999999888 788999987654432 56799999999999988 79999988743 358999999
Q ss_pred CCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCC-cceeeccccccccccccc
Q 003384 540 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANF-VSKLSDFGISRFLSQNEI 618 (824)
Q Consensus 540 ~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~-~vKL~DFGla~~~~~~~~ 618 (824)
.+++|.+++........++......++.+++.+|.|+|. .+++||||||+|||++..+ .++++|||+++.+.....
T Consensus 81 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~---~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~ 157 (384)
T COG0515 81 DGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHS---KGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGS 157 (384)
T ss_pred CCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCc
Confidence 999999766322111368888999999999999999999 7899999999999999988 799999999985544332
Q ss_pred cCCCccccccCCCCCCcccCChhhhcc---CCCCcchhHHhHHHHHHHHHhCCCCCCCchH---HHHHHh---hhccccc
Q 003384 619 SSNNTTLCCRTDPKGTFAYMDPEFLAS---GELTPKSDVYSFGIILLRLLTGRPALGITKE---VQYALD---TGKLKNL 689 (824)
Q Consensus 619 ~~~~~~~~~~~~~~GT~~Y~APE~l~~---~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~---~~~~~~---~~~~~~~ 689 (824)
..... .......||..|+|||.+.+ ..++...|+||+|++++++++|..||..... ...... .......
T Consensus 158 ~~~~~--~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (384)
T COG0515 158 TSSIP--ALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSL 235 (384)
T ss_pred ccccc--ccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCccc
Confidence 11100 01245679999999999987 5788899999999999999999999876542 111111 1110000
Q ss_pred cCCCCCCCChhhHHHHHHHHHHHhhhccCCCCChHHHHHH
Q 003384 690 LDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWR 729 (824)
Q Consensus 690 ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~ 729 (824)
........+......+.+++..|+..+|..|.+.......
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 236 ASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred ccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 0001111111123578999999999999999998655443
No 410
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.86 E-value=3.5e-21 Score=201.55 Aligned_cols=261 Identities=19% Similarity=0.249 Sum_probs=196.3
Q ss_pred hcCCCCccceeeecCceEEEEEE--ECCeEEEEEEecCCCCCCchhHHHHHHHHHhcC-CCceeeEecccC--CceEEEE
Q 003384 462 ATHNFDPSLKIGEGGYGSIYKGL--LRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIR-HPNLVTLVGACP--EVWTLVY 536 (824)
Q Consensus 462 ~~~~f~~~~~LG~G~fG~Vykg~--~~~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~-HpnIv~L~g~~~--~~~~LV~ 536 (824)
..-+|.++++||+|+||+++.|. +++.+||||.-...+ ...++..|....+.|. .++|...|.+-+ -...||+
T Consensus 26 VG~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS--~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVi 103 (449)
T KOG1165|consen 26 VGPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS--EAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVI 103 (449)
T ss_pred ecccceeccccccCcceeeecccccccCceEEEEeccccC--CcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhh
Confidence 34589999999999999999995 568999999754332 2347899999999985 578877765544 4566999
Q ss_pred EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCC-----cceeecccccc
Q 003384 537 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANF-----VSKLSDFGISR 611 (824)
Q Consensus 537 Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~-----~vKL~DFGla~ 611 (824)
|++ |.||+|++.-.+ ..|+..++..||.|++.-+.|+|. +.+|.|||||+|+||..-+ .+.|+|||+|+
T Consensus 104 dLL-GPSLEDLFD~Cg--R~FSvKTV~miA~Qmi~rie~vH~---k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK 177 (449)
T KOG1165|consen 104 DLL-GPSLEDLFDLCG--RRFSVKTVAMIAKQMITRIEYVHE---KDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAK 177 (449)
T ss_pred hhh-CcCHHHHHHHhc--CcccHHhHHHHHHHHHHHHHHHHh---cceeecccCccceeecCCCCCCCceEEEEeccchh
Confidence 998 889999886443 458999999999999999999999 8899999999999997533 57899999999
Q ss_pred ccccccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHH---HHHHhhhcccc
Q 003384 612 FLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEV---QYALDTGKLKN 688 (824)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~---~~~~~~~~~~~ 688 (824)
.+.+..+..... ........||..||+=-...+...+...|+-|||-||++.|-|..||.+-... +.--..|....
T Consensus 178 ~YrDp~TkqHIP-YrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKIGe~Kr 256 (449)
T KOG1165|consen 178 EYRDPKTKQHIP-YREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKIGETKR 256 (449)
T ss_pred hhcCccccccCc-cccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHhccccc
Confidence 887776554332 23346678999999998888999999999999999999999999999653211 11111121111
Q ss_pred ccCCCCCCCChhhHHHHHHHHHHHhhhccCCCCChHHHHHHHHHHH
Q 003384 689 LLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM 734 (824)
Q Consensus 689 ~ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le~l 734 (824)
.. ++ ...-...+.++...+.-....+..+-|+. +-+...+..+
T Consensus 257 ~T-~i-~~Lc~g~P~efa~Yl~yvR~L~F~E~PDY-dylr~Lf~dv 299 (449)
T KOG1165|consen 257 ST-PI-EVLCEGFPEEFATYLRYVRRLDFFETPDY-DYLRKLFDDV 299 (449)
T ss_pred cC-CH-HHHHhcCHHHHHHHHHHHHhcCcccCCCH-HHHHHHHHHH
Confidence 10 00 00112235688888888889999999998 4444444443
No 411
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.86 E-value=3.2e-21 Score=194.10 Aligned_cols=248 Identities=20% Similarity=0.289 Sum_probs=189.0
Q ss_pred cCCCCccceeeecCceEEEEEEE--CCeEEEEEEecCCCCCCchhHHHHHHHHHhcCC-CceeeEeccc--CCceEEEEE
Q 003384 463 THNFDPSLKIGEGGYGSIYKGLL--RHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRH-PNLVTLVGAC--PEVWTLVYE 537 (824)
Q Consensus 463 ~~~f~~~~~LG~G~fG~Vykg~~--~~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~H-pnIv~L~g~~--~~~~~LV~E 537 (824)
.++|...++||.|+||.+|.|.. .+..||||+-..... ..++..|..+...|++ ..|..+.-+. .+...+||+
T Consensus 14 ~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~--hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMd 91 (341)
T KOG1163|consen 14 GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAK--HPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMD 91 (341)
T ss_pred ccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCC--CcchhHHHHHHHHhccCCCCchhhhhccccccceeeee
Confidence 45799999999999999999975 468999998654432 2468899999999975 4555555454 345679999
Q ss_pred ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCC---Ccceeeccccccccc
Q 003384 538 YLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDAN---FVSKLSDFGISRFLS 614 (824)
Q Consensus 538 y~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~---~~vKL~DFGla~~~~ 614 (824)
.+ |.||++++... ...++..+.+-++-|++.-++|+|. +++|||||||+|+|..-+ ..+.|+|||||+.+.
T Consensus 92 LL-GPsLEdLfnfC--~R~ftmkTvLMLaDQml~RiEyvH~---r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~ 165 (341)
T KOG1163|consen 92 LL-GPSLEDLFNFC--SRRFTMKTVLMLADQMLSRIEYVHL---RNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYR 165 (341)
T ss_pred cc-CccHHHHHHHH--hhhhhHHhHHHHHHHHHHHHHHHHh---hccccccCCccceeeccccccceEEEEeccchhhhc
Confidence 98 88999988533 3458889999999999999999999 899999999999999744 467899999999876
Q ss_pred cccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHH-----HHhhhccccc
Q 003384 615 QNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQY-----ALDTGKLKNL 689 (824)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~-----~~~~~~~~~~ 689 (824)
+..+...... .......||..|.+--.+.+...+...|+-|+|.+|.++.-|..||.+...... -+.+.++...
T Consensus 166 d~~t~~HIpy-re~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~EkK~s~~ 244 (341)
T KOG1163|consen 166 DIRTRQHIPY-REDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISEKKMSTP 244 (341)
T ss_pred cccccccCcc-ccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHHHhhcCCC
Confidence 5543322211 122456799999998888888889999999999999999999999975433211 1122222222
Q ss_pred cCCCCCCCChhhHHHHHHHHHHHhhhccCCCCCh
Q 003384 690 LDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPEL 723 (824)
Q Consensus 690 ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~ 723 (824)
+..+...+ +.++.-.+.-|-..-.++-|+.
T Consensus 245 ie~LC~G~----P~EF~myl~Y~R~L~F~E~Pdy 274 (341)
T KOG1163|consen 245 IEVLCKGF----PAEFAMYLNYCRGLGFEEKPDY 274 (341)
T ss_pred HHHHhCCC----cHHHHHHHHHHhhcCCCCCCcH
Confidence 22233333 4578889999999999999987
No 412
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.82 E-value=6.3e-21 Score=223.86 Aligned_cols=247 Identities=23% Similarity=0.335 Sum_probs=180.7
Q ss_pred CCCccceeeecCceEEEEEEECCeEEEEEEecCCC-CCCchhHHHHHHH--HHhcCCCceeeEeccc--CCceEEEEEec
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHS-LQGPSEFQQEIDI--LSKIRHPNLVTLVGAC--PEVWTLVYEYL 539 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~~~~VAvK~l~~~~-~~~~~~f~~Ei~i--L~~l~HpnIv~L~g~~--~~~~~LV~Ey~ 539 (824)
+|...+.||.+.|=+|.+|+++...|+||++-... ..+...|.+.+.- ...++|||++++.-.- ....|||-+|+
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRqyv 103 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGLVVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQYV 103 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCceEEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHHHH
Confidence 56777889999999999999998889999987654 3344555554433 3445899999886543 34567888998
Q ss_pred CCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccccccc
Q 003384 540 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEIS 619 (824)
Q Consensus 540 ~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~ 619 (824)
.+ +|+|+| ..++.|...+...|+.|++.||.-+|. .||+|||||.+||||+.-..+.|+||.--+...-.+..
T Consensus 104 kh-nLyDRl---STRPFL~~iEKkWiaFQLL~al~qcH~---~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDN 176 (1431)
T KOG1240|consen 104 KH-NLYDRL---STRPFLVLIEKKWIAFQLLKALSQCHK---LGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDN 176 (1431)
T ss_pred hh-hhhhhh---ccchHHHHHHHHHHHHHHHHHHHHHHH---cCccccccccceEEEeeechhhhhcccccCCccCCCCC
Confidence 55 899999 455678888899999999999999999 89999999999999999999999999876643322222
Q ss_pred CCCccccccCCCCCCcccCChhhhccC----------C-CCcchhHHhHHHHHHHHHh-CCCCCCCchHHHHHHhhhc--
Q 003384 620 SNNTTLCCRTDPKGTFAYMDPEFLASG----------E-LTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGK-- 685 (824)
Q Consensus 620 ~~~~~~~~~~~~~GT~~Y~APE~l~~~----------~-~t~ksDVwSlGvvL~ELlt-G~~Pf~~~~~~~~~~~~~~-- 685 (824)
...-... ..+...-.+|+|||.|... . .++++||||+||+++||++ |+|||....-..+ ..|.
T Consensus 177 Padf~fF-FDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQL~aY--r~~~~~ 253 (1431)
T KOG1240|consen 177 PADFTFF-FDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQLLAY--RSGNAD 253 (1431)
T ss_pred cccceEE-EecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHHHHhH--hccCcc
Confidence 2111111 1222345589999988542 2 6789999999999999998 8999976544333 2221
Q ss_pred -cccccCCCCCCCChhhHHHHHHHHHHHhhhccCCCCChHHHHHH
Q 003384 686 -LKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWR 729 (824)
Q Consensus 686 -~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~ 729 (824)
....+. ......+++|++.|++.+|..|-+. +++++
T Consensus 254 ~~e~~Le-------~Ied~~~Rnlil~Mi~rdPs~RlSA-edyL~ 290 (1431)
T KOG1240|consen 254 DPEQLLE-------KIEDVSLRNLILSMIQRDPSKRLSA-EDYLQ 290 (1431)
T ss_pred CHHHHHH-------hCcCccHHHHHHHHHccCchhccCH-HHHHH
Confidence 111111 1122378999999999999999998 44433
No 413
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.82 E-value=1.5e-20 Score=194.97 Aligned_cols=170 Identities=16% Similarity=0.175 Sum_probs=133.0
Q ss_pred hcCCCCccceeeecCceEEEEEEECCeEEEEEEecCCCCCCchh---------HHHHHHHHHhcCCCceeeEecccC---
Q 003384 462 ATHNFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSE---------FQQEIDILSKIRHPNLVTLVGACP--- 529 (824)
Q Consensus 462 ~~~~f~~~~~LG~G~fG~Vykg~~~~~~VAvK~l~~~~~~~~~~---------f~~Ei~iL~~l~HpnIv~L~g~~~--- 529 (824)
..++|...++||.|+||.||.....+..+|||++.+........ +.+|+..+.++.||+|..+.+++.
T Consensus 29 l~~~y~~~~~l~~~~f~~v~l~~~~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~ 108 (232)
T PRK10359 29 LSYNIKTIKVFRNIDDTKVSLIDTDYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAE 108 (232)
T ss_pred hhCceEEEEEecCCCceEEEEEecCCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeecc
Confidence 46789999999999999999977777889999998654433322 678999999999999998877642
Q ss_pred -------CceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcc
Q 003384 530 -------EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVS 602 (824)
Q Consensus 530 -------~~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~v 602 (824)
...+|||||++|.+|.++.. ++. ....+++.+|..+|. .|++|||++|+||+++++| +
T Consensus 109 ~~~~~~~~~~~lvmEyi~G~tL~~~~~-------~~~----~~~~~i~~~l~~lH~---~gi~H~Dikp~Nili~~~g-i 173 (232)
T PRK10359 109 RKTLRYAHTYIMLIEYIEGVELNDMPE-------ISE----DVKAKIKASIESLHQ---HGMVSGDPHKGNFIVSKNG-L 173 (232)
T ss_pred cccccccCCeEEEEEEECCccHHHhhh-------ccH----HHHHHHHHHHHHHHH---cCCccCCCChHHEEEeCCC-E
Confidence 24789999999999988641 222 245689999999999 8999999999999999998 9
Q ss_pred eeeccccccccccccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHh
Q 003384 603 KLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT 666 (824)
Q Consensus 603 KL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELlt 666 (824)
+|+|||.......... ..-++....|+.++|+|||||.|.-+..
T Consensus 174 ~liDfg~~~~~~e~~a--------------------~d~~vler~y~~~~di~~lg~~~~~~~~ 217 (232)
T PRK10359 174 RIIDLSGKRCTAQRKA--------------------KDRIDLERHYGIKNEIKDLGYYLLIYKK 217 (232)
T ss_pred EEEECCCcccccchhh--------------------HHHHHHHhHhcccccccceeEeehHHHH
Confidence 9999998764422110 0113445567789999999999876543
No 414
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.81 E-value=5.7e-20 Score=187.16 Aligned_cols=137 Identities=18% Similarity=0.197 Sum_probs=105.7
Q ss_pred ceeeecCceEEEEEEEC-CeEEEEEEecCCCCC--C-------chhH-----------------HHHHHHHHhcCCCcee
Q 003384 470 LKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQ--G-------PSEF-----------------QQEIDILSKIRHPNLV 522 (824)
Q Consensus 470 ~~LG~G~fG~Vykg~~~-~~~VAvK~l~~~~~~--~-------~~~f-----------------~~Ei~iL~~l~HpnIv 522 (824)
..||+|+||.||+|... +..||||+++..... . ...| ..|+.+|.++.++++.
T Consensus 3 ~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v~ 82 (190)
T cd05147 3 GCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGIP 82 (190)
T ss_pred CccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 56999999999999875 789999999764221 1 1122 3499999999877764
Q ss_pred eEecccCCceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHH-hhcCCCceEeccccCCcEEecCCCc
Q 003384 523 TLVGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFL-HSCKPHSIVHGDLKPANILLDANFV 601 (824)
Q Consensus 523 ~L~g~~~~~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~L-H~~~~~giiHrDLKp~NILld~~~~ 601 (824)
..........+|||||++|++|...+. ...+++......++.+++.+|.+| |. .||+||||||+|||++ ++.
T Consensus 83 ~p~~~~~~~~~iVmE~i~g~~l~~~~~---~~~~~~~~~~~~i~~qi~~~L~~l~H~---~giiHrDlkP~NIli~-~~~ 155 (190)
T cd05147 83 CPEPILLKSHVLVMEFIGDDGWAAPRL---KDAPLSESKARELYLQVIQIMRILYQD---CRLVHADLSEYNLLYH-DGK 155 (190)
T ss_pred CCcEEEecCCEEEEEEeCCCCCcchhh---hcCCCCHHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEE-CCc
Confidence 332222233489999999887765432 234688899999999999999999 57 7899999999999998 478
Q ss_pred ceeecccccccc
Q 003384 602 SKLSDFGISRFL 613 (824)
Q Consensus 602 vKL~DFGla~~~ 613 (824)
++|+|||+|...
T Consensus 156 v~LiDFG~a~~~ 167 (190)
T cd05147 156 LYIIDVSQSVEH 167 (190)
T ss_pred EEEEEccccccC
Confidence 999999998744
No 415
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.80 E-value=1.7e-20 Score=220.82 Aligned_cols=247 Identities=22% Similarity=0.305 Sum_probs=175.3
Q ss_pred CccceeeecCceEEEEEEEC--CeEEEEEEecCC--CCCCc----hhHHHHHHHHHhcCCCceeeEecccCC--ceEEEE
Q 003384 467 DPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPH--SLQGP----SEFQQEIDILSKIRHPNLVTLVGACPE--VWTLVY 536 (824)
Q Consensus 467 ~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~--~~~~~----~~f~~Ei~iL~~l~HpnIv~L~g~~~~--~~~LV~ 536 (824)
.....+|.|+||.|+..... ...++.|.+... ..... ..+..|+.+-..|.|||++..+..+.+ ..+-+|
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~m 400 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSM 400 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhh
Confidence 45678999999977766543 233444433211 11111 125567888888999999887776633 333459
Q ss_pred EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccc
Q 003384 537 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQN 616 (824)
Q Consensus 537 Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~ 616 (824)
|||++ +|..++... ..+....+-.++.|+..||.|+|. .||.||||||+|++++.+|.+||+|||.+..+...
T Consensus 401 E~~~~-Dlf~~~~~~---~~~~~~e~~c~fKqL~~Gv~y~h~---~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~ 473 (601)
T KOG0590|consen 401 EYCPY-DLFSLVMSN---GKLTPLEADCFFKQLLRGVKYLHS---MGLAHRDLKLENLLVTENGILKIIDFGAASVFRYP 473 (601)
T ss_pred hcccH-HHHHHHhcc---cccchhhhhHHHHHHHHHHHHHHh---cCceeccCccccEEEecCCceEEeecCcceeeccC
Confidence 99999 999998532 457778889999999999999999 89999999999999999999999999999876544
Q ss_pred cccCCCccccccCCCCCCcccCChhhhccCCCCcc-hhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCC
Q 003384 617 EISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPK-SDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAG 695 (824)
Q Consensus 617 ~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~k-sDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~ 695 (824)
... ......+..|+..|+|||.+.+..|++. .||||.|+++..|++|+.||.......................+
T Consensus 474 ~e~----~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~ 549 (601)
T KOG0590|consen 474 WEK----NIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEG 549 (601)
T ss_pred cch----hhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhccccccccccC
Confidence 321 1122356789999999999999999875 79999999999999999999543221110000000000000111
Q ss_pred CC--ChhhHHHHHHHHHHHhhhccCCCCChH
Q 003384 696 DW--PFVQAEQLANLAMRCCEMSRKSRPELG 724 (824)
Q Consensus 696 ~~--p~~~~~~l~~Li~~Cl~~~P~~RPt~~ 724 (824)
.+ ....+..-..++.++|+.+|.+|.++.
T Consensus 550 ~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~ 580 (601)
T KOG0590|consen 550 PNRLLSLLPRETRIIIYRMLQLDPTKRITIE 580 (601)
T ss_pred hHHHHHhchhhHHHHHHHHccCChhheecHH
Confidence 11 123456778999999999999999994
No 416
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.80 E-value=2e-19 Score=183.26 Aligned_cols=192 Identities=15% Similarity=0.054 Sum_probs=140.9
Q ss_pred CccceeeecCceEEEEEEECCeEEEEEEecCCCCCC----chhHHHHHHHHHhcC-CCceeeEecccCCceEEEEEecCC
Q 003384 467 DPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQG----PSEFQQEIDILSKIR-HPNLVTLVGACPEVWTLVYEYLPN 541 (824)
Q Consensus 467 ~~~~~LG~G~fG~Vykg~~~~~~VAvK~l~~~~~~~----~~~f~~Ei~iL~~l~-HpnIv~L~g~~~~~~~LV~Ey~~g 541 (824)
.....||+|+||+||.+...+.+++.+.+.....-. ...|.+|+++|++|. |++|++++++ +..+++|||+.|
T Consensus 5 ~~~~~l~~~~f~~v~~~~~~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~--~~~~lvmeyI~G 82 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRGGERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW--DGRHLDRSYLAG 82 (218)
T ss_pred ccceeecCCCcceEEEeecCCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE--cCEEEEEeeecC
Confidence 455689999999999877777888888776543311 124789999999995 5889999886 457899999999
Q ss_pred CChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccc-cCCcEEecCCCcceeecccccccccccccc-
Q 003384 542 GSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDL-KPANILLDANFVSKLSDFGISRFLSQNEIS- 619 (824)
Q Consensus 542 gsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDL-Kp~NILld~~~~vKL~DFGla~~~~~~~~~- 619 (824)
.+|...+. . ....++.+++.+|.++|. +||+|||| ||+|||++.++.++|+|||+|.........
T Consensus 83 ~~L~~~~~----~------~~~~~~~qi~~~L~~lH~---~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~ 149 (218)
T PRK12274 83 AAMYQRPP----R------GDLAYFRAARRLLQQLHR---CGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWM 149 (218)
T ss_pred ccHHhhhh----h------hhHHHHHHHHHHHHHHHH---CcCccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHH
Confidence 99875441 0 123577899999999999 89999999 799999999999999999999855432210
Q ss_pred ---CC-CccccccCCCCCCcccCChhhhccC-CCC-cchhHHhHHHHHHHHHhCCCCCCC
Q 003384 620 ---SN-NTTLCCRTDPKGTFAYMDPEFLASG-ELT-PKSDVYSFGIILLRLLTGRPALGI 673 (824)
Q Consensus 620 ---~~-~~~~~~~~~~~GT~~Y~APE~l~~~-~~t-~ksDVwSlGvvL~ELltG~~Pf~~ 673 (824)
.. ........-..+++.|++|+-..-- ..+ ...++++.|+-+|.++||+.++-.
T Consensus 150 r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~ 209 (218)
T PRK12274 150 RLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWE 209 (218)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccc
Confidence 00 0000000112378889999754322 233 567999999999999999987643
No 417
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.79 E-value=2.8e-20 Score=210.02 Aligned_cols=221 Identities=27% Similarity=0.324 Sum_probs=176.6
Q ss_pred eeecCceEEEEE-----EECCeEEEEEEecCCCCCC--chhHHHHHHHHHhcC-CCceeeEecccC--CceEEEEEecCC
Q 003384 472 IGEGGYGSIYKG-----LLRHMQVAIKMLHPHSLQG--PSEFQQEIDILSKIR-HPNLVTLVGACP--EVWTLVYEYLPN 541 (824)
Q Consensus 472 LG~G~fG~Vykg-----~~~~~~VAvK~l~~~~~~~--~~~f~~Ei~iL~~l~-HpnIv~L~g~~~--~~~~LV~Ey~~g 541 (824)
+|+|.||.|+.+ ...+.-+|+|+++...... ......|..++..++ ||.+|++...+. ...+++++|..|
T Consensus 2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~rg 81 (612)
T KOG0603|consen 2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLRG 81 (612)
T ss_pred CCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhccc
Confidence 799999999863 3446778999887653322 124567889999997 999999998874 468899999999
Q ss_pred CChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccccCC
Q 003384 542 GSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSN 621 (824)
Q Consensus 542 gsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~~~ 621 (824)
|.|...+. ....+.......+...++-++.++|. .+|+|||+|++||+++.+|++|+.|||+++..-....
T Consensus 82 g~lft~l~---~~~~f~~~~~~~~~aelaLald~lh~---l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~--- 152 (612)
T KOG0603|consen 82 GDLFTRLS---KEVMFDELDVAFYLAELALALDHLHK---LGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKI--- 152 (612)
T ss_pred chhhhccc---cCCchHHHHHHHHHHHHHHHHhhcch---hHHHHhcccccceeecccCccccCCchhhhHhHhhhh---
Confidence 99988884 44556777777788889999999999 8999999999999999999999999999986654321
Q ss_pred CccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCCCCChhh
Q 003384 622 NTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQ 701 (824)
Q Consensus 622 ~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~ 701 (824)
..||..|||||++. ++...+|+||||++++||+||..||.. +. ...+.......|...
T Consensus 153 ---------~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~--~~---------~~~Il~~~~~~p~~l 210 (612)
T KOG0603|consen 153 ---------ACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG--DT---------MKRILKAELEMPREL 210 (612)
T ss_pred ---------cccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch--HH---------HHHHhhhccCCchhh
Confidence 15899999999998 667889999999999999999999976 11 111111223456777
Q ss_pred HHHHHHHHHHHhhhccCCCCCh
Q 003384 702 AEQLANLAMRCCEMSRKSRPEL 723 (824)
Q Consensus 702 ~~~l~~Li~~Cl~~~P~~RPt~ 723 (824)
...+..++.+++..+|.+|--.
T Consensus 211 ~~~a~~~~~~l~~r~p~nrLg~ 232 (612)
T KOG0603|consen 211 SAEARSLFRQLFKRNPENRLGA 232 (612)
T ss_pred hHHHHHHHHHHHhhCHHHHhcc
Confidence 7889999999999999998754
No 418
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.78 E-value=1e-18 Score=177.85 Aligned_cols=140 Identities=18% Similarity=0.191 Sum_probs=108.5
Q ss_pred cceeeecCceEEEEEEEC-CeEEEEEEecCCCCC---------------------Cc-----hhHHHHHHHHHhcCCCce
Q 003384 469 SLKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQ---------------------GP-----SEFQQEIDILSKIRHPNL 521 (824)
Q Consensus 469 ~~~LG~G~fG~Vykg~~~-~~~VAvK~l~~~~~~---------------------~~-----~~f~~Ei~iL~~l~HpnI 521 (824)
...||+|+||.||+|... +..||||+++..... .. ..+..|...+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 357999999999999875 789999999865321 00 113578999999999987
Q ss_pred eeEecccCCceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCc
Q 003384 522 VTLVGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFV 601 (824)
Q Consensus 522 v~L~g~~~~~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~ 601 (824)
.....+.....+|||||++|+++...+. ...+++......++.+++.+|.+||+. .||+||||||.|||++ ++.
T Consensus 82 ~~p~~~~~~~~~lVmE~~~g~~~~~~~l---~~~~~~~~~~~~i~~~l~~~l~~lH~~--~givHrDlkP~NIll~-~~~ 155 (190)
T cd05145 82 PVPEPILLKKNVLVMEFIGDDGSPAPRL---KDVPLEEEEAEELYEQVVEQMRRLYQE--AGLVHGDLSEYNILYH-DGK 155 (190)
T ss_pred CCceEEEecCCEEEEEEecCCCchhhhh---hhccCCHHHHHHHHHHHHHHHHHHHHh--CCEecCCCChhhEEEE-CCC
Confidence 4433322234589999999886543321 124577788999999999999999983 4899999999999999 889
Q ss_pred ceeeccccccccc
Q 003384 602 SKLSDFGISRFLS 614 (824)
Q Consensus 602 vKL~DFGla~~~~ 614 (824)
++|+|||++....
T Consensus 156 ~~liDFG~a~~~~ 168 (190)
T cd05145 156 PYIIDVSQAVELD 168 (190)
T ss_pred EEEEEcccceecC
Confidence 9999999998654
No 419
>PRK10345 hypothetical protein; Provisional
Probab=99.74 E-value=8.8e-18 Score=173.34 Aligned_cols=134 Identities=18% Similarity=0.233 Sum_probs=103.0
Q ss_pred CccceeeecCceEEEEEEECCeEEEEEEecCCCCCCchhHHHHHHHHHhc-----CCCceeeEecccCCc------eEEE
Q 003384 467 DPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKI-----RHPNLVTLVGACPEV------WTLV 535 (824)
Q Consensus 467 ~~~~~LG~G~fG~Vykg~~~~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l-----~HpnIv~L~g~~~~~------~~LV 535 (824)
.....||+|+||.||..... ...+||++........+.+.+|+.+++.+ +||||++++|++... +.+|
T Consensus 5 ~~~~~LG~G~~~~Vy~hp~~-~~k~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I 83 (210)
T PRK10345 5 SEQSPLGTGRHRKCYAHPED-AQRCIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVI 83 (210)
T ss_pred CCcceecCCCceEEEECCCC-cCeEEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEE
Confidence 44568999999999962222 33479988765444566799999999999 579999999998442 2378
Q ss_pred EEe--cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHH-HHHhhcCCCceEeccccCCcEEecC----CCcceeeccc
Q 003384 536 YEY--LPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVL-IFLHSCKPHSIVHGDLKPANILLDA----NFVSKLSDFG 608 (824)
Q Consensus 536 ~Ey--~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL-~~LH~~~~~giiHrDLKp~NILld~----~~~vKL~DFG 608 (824)
+|| +++|+|.+++.. ..++.. ..++.+++.++ .|||+ ++||||||||+|||++. ++.++|+||+
T Consensus 84 ~e~~G~~~~tL~~~l~~----~~~~e~--~~~~~~~L~~l~~yLh~---~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~ 154 (210)
T PRK10345 84 ADFDGKPSITLTEFAEQ----CRYEED--VAQLRQLLKKLKRYLLD---NRIVTMELKPQNILCQRISESEVIPVVCDNI 154 (210)
T ss_pred ecCCCCcchhHHHHHHc----ccccHh--HHHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEeccCCCCCcEEEEECC
Confidence 999 667999999943 235544 35677888777 89999 89999999999999974 3489999955
Q ss_pred cc
Q 003384 609 IS 610 (824)
Q Consensus 609 la 610 (824)
.+
T Consensus 155 G~ 156 (210)
T PRK10345 155 GE 156 (210)
T ss_pred CC
Confidence 33
No 420
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.72 E-value=3.7e-17 Score=174.64 Aligned_cols=230 Identities=21% Similarity=0.288 Sum_probs=147.1
Q ss_pred CCCccceeeecCceEEEEEEECC--eEEEEEEecCCCCC---CchhHHHHHHHHHhcCC----------Cc------eee
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHSLQ---GPSEFQQEIDILSKIRH----------PN------LVT 523 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~~--~~VAvK~l~~~~~~---~~~~f~~Ei~iL~~l~H----------pn------Iv~ 523 (824)
.+.....||.|+|+.||.+++.. ..+|+|++...... ..+.+.+|.-....+.+ -. +++
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence 34456789999999999999874 89999998654422 23456666644444322 11 222
Q ss_pred Eecc---c---C--C-----ceEEEEEecCCCChhhhhhc---cCC-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEe
Q 003384 524 LVGA---C---P--E-----VWTLVYEYLPNGSLEDRLSC---KDN-SPPLSWQTRIRIATELCSVLIFLHSCKPHSIVH 586 (824)
Q Consensus 524 L~g~---~---~--~-----~~~LV~Ey~~ggsL~~~L~~---~~~-~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiH 586 (824)
+-+- + . . ..+++|.-+ .++|.+++.. ... ...+....++.+..|+.+.+++||. .|++|
T Consensus 93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~---~GlVH 168 (288)
T PF14531_consen 93 IPGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHS---YGLVH 168 (288)
T ss_dssp ETTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHH---TTEEE
T ss_pred EcCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhh---cceEe
Confidence 2210 0 0 1 235677766 4688776532 111 2335556777888999999999999 89999
Q ss_pred ccccCCcEEecCCCcceeeccccccccccccccCCCccccccCCCCCCcccCChhhhccC--------CCCcchhHHhHH
Q 003384 587 GDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG--------ELTPKSDVYSFG 658 (824)
Q Consensus 587 rDLKp~NILld~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~--------~~t~ksDVwSlG 658 (824)
+||+|+|+|++.+|.++|+||+........... ...+..|.+||..... .++.+.|.|+||
T Consensus 169 gdi~~~nfll~~~G~v~Lg~F~~~~r~g~~~~~-----------~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG 237 (288)
T PF14531_consen 169 GDIKPENFLLDQDGGVFLGDFSSLVRAGTRYRC-----------SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLG 237 (288)
T ss_dssp ST-SGGGEEE-TTS-EEE--GGGEEETTEEEEG-----------GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHH
T ss_pred cccceeeEEEcCCCCEEEcChHHHeecCceeec-----------cCCCcccCChhhhhhhcccCcccceeeeccCHHHHH
Confidence 999999999999999999999977654432211 1245789999977442 478889999999
Q ss_pred HHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCCCCChhhHHHHHHHHHHHhhhccCCC
Q 003384 659 IILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSR 720 (824)
Q Consensus 659 vvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~R 720 (824)
+++|.|++|+.||+....... .+.....+. ..++.+..||..+|+.+|.+|
T Consensus 238 ~~ly~lWC~~lPf~~~~~~~~----------~~~~f~~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 238 ITLYSLWCGRLPFGLSSPEAD----------PEWDFSRCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp HHHHHHHHSS-STCCCGGGST----------SGGGGTTSS----HHHHHHHHHHT-SSGGGS
T ss_pred HHHHHHHHccCCCCCCCcccc----------ccccchhcC-CcCHHHHHHHHHHccCCcccC
Confidence 999999999999986532110 000223344 678899999999999999987
No 421
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.72 E-value=8.8e-18 Score=197.88 Aligned_cols=216 Identities=24% Similarity=0.297 Sum_probs=147.6
Q ss_pred hcCCCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCCCchhHHHHHHHHHhcCCCceeeEecccCCceEEEEEec
Q 003384 462 ATHNFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPEVWTLVYEYL 539 (824)
Q Consensus 462 ~~~~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~~~~~LV~Ey~ 539 (824)
...+|+.++.|-.|+||-||...++ .+++|+|+ +.... +.+- |+.....|.+ |
T Consensus 81 ~e~df~~IklisngAygavylvrh~~trqrfa~ki-Nkq~l-----ilRn--ilt~a~npfv-------------v---- 135 (1205)
T KOG0606|consen 81 SESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKI-NKQNL-----ILRN--ILTFAGNPFV-------------V---- 135 (1205)
T ss_pred CccccceeEeeccCCCCceeeeeccccccchhhcc-cccch-----hhhc--cccccCCcce-------------e----
Confidence 3458999999999999999999776 57899854 32211 1110 2222233333 2
Q ss_pred CCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccccccccc
Q 003384 540 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEIS 619 (824)
Q Consensus 540 ~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~ 619 (824)
|+-.+.+ .+-++++... +.+++|||+ .||+|||+||+|+||+.-|++|+.|||+++........
T Consensus 136 --gDc~tll---k~~g~lPvdm--------vla~Eylh~---ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~at 199 (1205)
T KOG0606|consen 136 --GDCATLL---KNIGPLPVDM--------VLAVEYLHS---YGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLAT 199 (1205)
T ss_pred --chhhhhc---ccCCCCcchh--------hHHhHhhcc---CCeecCCCCCCcceeeecccccccchhhhhhhhhhccc
Confidence 4555555 3334455432 678999999 89999999999999999999999999999743221111
Q ss_pred CC-------CccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHH-HHHHhhhccccccC
Q 003384 620 SN-------NTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEV-QYALDTGKLKNLLD 691 (824)
Q Consensus 620 ~~-------~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~-~~~~~~~~~~~~ld 691 (824)
.. ...........||+.|+|||++..++|+..+|||++|+|+||.+.|..||.++..- ......+....+.+
T Consensus 200 nl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~wpE 279 (1205)
T KOG0606|consen 200 NLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPE 279 (1205)
T ss_pred hhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhccccc
Confidence 00 01111224557999999999999999999999999999999999999999766321 11111111111111
Q ss_pred CCCCCCChhhHHHHHHHHHHHhhhccCCCCCh
Q 003384 692 PLAGDWPFVQAEQLANLAMRCCEMSRKSRPEL 723 (824)
Q Consensus 692 ~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~ 723 (824)
. ....+.++++++.+.|+.+|..|--.
T Consensus 280 ---~--dea~p~Ea~dli~~LL~qnp~~Rlgt 306 (1205)
T KOG0606|consen 280 ---E--DEALPPEAQDLIEQLLRQNPLCRLGT 306 (1205)
T ss_pred ---c--CcCCCHHHHHHHHHHHHhChHhhccc
Confidence 1 12235689999999999999999644
No 422
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.71 E-value=5e-17 Score=165.94 Aligned_cols=128 Identities=27% Similarity=0.407 Sum_probs=105.5
Q ss_pred eeeecCceEEEEEEECCeEEEEEEecCCCCCC--------chhHHHHHHHHHhcCCCce--eeEecccCCceEEEEEecC
Q 003384 471 KIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQG--------PSEFQQEIDILSKIRHPNL--VTLVGACPEVWTLVYEYLP 540 (824)
Q Consensus 471 ~LG~G~fG~Vykg~~~~~~VAvK~l~~~~~~~--------~~~f~~Ei~iL~~l~HpnI--v~L~g~~~~~~~LV~Ey~~ 540 (824)
.||+|+||.||+|.+.+..|++|......... ...+.+|+.++..+.|+++ ..+++...+..++||||++
T Consensus 1 ~ig~G~~~~vy~~~~~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~~ 80 (199)
T TIGR03724 1 LIAKGAEAIIYLGDFLGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYIE 80 (199)
T ss_pred CCCCCceEEEEEeecCCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEEC
Confidence 38999999999999999999999876433211 1457789999999988754 4555555667799999999
Q ss_pred CCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccc
Q 003384 541 NGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRF 612 (824)
Q Consensus 541 ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~ 612 (824)
|++|.+.+... . ..++.+++.+|.+||. .|++|||++|.|||++ ++.++++|||++..
T Consensus 81 g~~l~~~~~~~---~-------~~~~~~i~~~l~~lH~---~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 81 GKPLKDVIEEG---N-------DELLREIGRLVGKLHK---AGIVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred CccHHHHHhhc---H-------HHHHHHHHHHHHHHHH---CCeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 99999887321 1 1789999999999999 8999999999999999 88999999998875
No 423
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.71 E-value=5.3e-17 Score=167.15 Aligned_cols=132 Identities=27% Similarity=0.438 Sum_probs=109.8
Q ss_pred ceeeecCceEEEEEEECCeEEEEEEecCCCCCCc--------hhHHHHHHHHHhcCCCceeeEecc--cCCceEEEEEec
Q 003384 470 LKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGP--------SEFQQEIDILSKIRHPNLVTLVGA--CPEVWTLVYEYL 539 (824)
Q Consensus 470 ~~LG~G~fG~Vykg~~~~~~VAvK~l~~~~~~~~--------~~f~~Ei~iL~~l~HpnIv~L~g~--~~~~~~LV~Ey~ 539 (824)
+.||+|++|.||+|.+.+..|++|+......... ..+.+|+.++..+.|+||.....+ ..+..++||||+
T Consensus 2 ~~l~~G~~~~vy~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 81 (211)
T PRK14879 2 KLIKRGAEAEIYLGDFLGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEYI 81 (211)
T ss_pred cccccCceEEEEEEeeCCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEEe
Confidence 4699999999999999989999998765433221 347789999999999887655444 456788999999
Q ss_pred CCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccc
Q 003384 540 PNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRF 612 (824)
Q Consensus 540 ~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~ 612 (824)
+|++|.+++... .. .+..++.+++.+|.+||. .+++|||++|.|||++ ++.++|+|||++..
T Consensus 82 ~G~~L~~~~~~~------~~-~~~~i~~~i~~~l~~lH~---~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 82 EGEPLKDLINSN------GM-EELELSREIGRLVGKLHS---AGIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred CCcCHHHHHHhc------cH-HHHHHHHHHHHHHHHHHh---CCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 999999988421 12 788999999999999999 8999999999999999 78999999998764
No 424
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.70 E-value=2.9e-17 Score=185.84 Aligned_cols=208 Identities=27% Similarity=0.455 Sum_probs=151.8
Q ss_pred HHhcCCCceeeEeccc--CCceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCce-Eeccc
Q 003384 513 LSKIRHPNLVTLVGAC--PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSI-VHGDL 589 (824)
Q Consensus 513 L~~l~HpnIv~L~g~~--~~~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~gi-iHrDL 589 (824)
|+.+.|.|+.+++|.| ....++|.+||..|+|.|.+.. ....+++.-...+..+|+.||.|||.. +| .|+.+
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~--~~~~~d~~F~~s~~rdi~~Gl~ylh~s---~i~~hg~l 75 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSN--EDIKLDYFFILSFIRDISKGLAYLHNS---PIGYHGAL 75 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhc--cccCccHHHHHHHHHHHHHHHHHHhcC---cceeeeee
Confidence 4578999999999988 4467889999999999999964 356688889999999999999999993 34 99999
Q ss_pred cCCcEEecCCCcceeeccccccccccccccCCCccccccCCCCCCcccCChhhhccC---C----CCcchhHHhHHHHHH
Q 003384 590 KPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASG---E----LTPKSDVYSFGIILL 662 (824)
Q Consensus 590 Kp~NILld~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~---~----~t~ksDVwSlGvvL~ 662 (824)
++.|.++|..+.+||+|||+............. ....-...|.|||.+... . .+.+.||||||++++
T Consensus 76 ~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~------~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ 149 (484)
T KOG1023|consen 76 KSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAH------HPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMY 149 (484)
T ss_pred ccccceeeeeEEEEechhhhccccccccccccc------chhHHHHhccCHHHhcccccccccccccccCCeehHHHHHH
Confidence 999999999999999999998876531101000 111135679999998763 2 466799999999999
Q ss_pred HHHhCCCCCCCchH------HHHHHhhhccccccCCCCCCCChhhHHHHHHHHHHHhhhccCCCCChHHHHHHHHHHH
Q 003384 663 RLLTGRPALGITKE------VQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRVLEPM 734 (824)
Q Consensus 663 ELltG~~Pf~~~~~------~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~Le~l 734 (824)
|+++...||+.... +...+.. .....+-|...... ...+.+..++.+||..+|.+||++ +.+...++.+
T Consensus 150 ei~~r~~~~~~~~~~~~~~eii~~~~~-~~~~~~rP~i~~~~-e~~~~l~~l~~~cw~e~P~~rPs~-~~i~~~~~~~ 224 (484)
T KOG1023|consen 150 EILFRSGPFDLRNLVEDPDEIILRVKK-GGSNPFRPSIELLN-ELPPELLLLVARCWEEIPEKRPSI-EQIRSKLLTI 224 (484)
T ss_pred HHHhccCccccccccCChHHHHHHHHh-cCCCCcCcchhhhh-hcchHHHHHHHHhcccChhhCccH-HHHHhhhhhh
Confidence 99999999975322 1111111 01111112111111 233479999999999999999999 5555555443
No 425
>smart00090 RIO RIO-like kinase.
Probab=99.70 E-value=5.5e-17 Score=170.92 Aligned_cols=140 Identities=19% Similarity=0.194 Sum_probs=109.3
Q ss_pred CCCccceeeecCceEEEEEE-E--CCeEEEEEEecCCCCC-------------------Cc-----hhHHHHHHHHHhcC
Q 003384 465 NFDPSLKIGEGGYGSIYKGL-L--RHMQVAIKMLHPHSLQ-------------------GP-----SEFQQEIDILSKIR 517 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~-~--~~~~VAvK~l~~~~~~-------------------~~-----~~f~~Ei~iL~~l~ 517 (824)
-|.+...||+|+||.||+|. . .+..||||++...... .. ..+..|+.++.++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 46777889999999999998 2 4689999998754211 00 12568999999997
Q ss_pred CC--ceeeEecccCCceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCc-eEeccccCCcE
Q 003384 518 HP--NLVTLVGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHS-IVHGDLKPANI 594 (824)
Q Consensus 518 Hp--nIv~L~g~~~~~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~g-iiHrDLKp~NI 594 (824)
+. .+.++++. ...++||||++|++|...+. ...++.......++.+++.+|.+||. .| |+||||||+||
T Consensus 109 ~~~i~~p~~~~~--~~~~lV~E~~~g~~L~~~~~---~~~~~~~~~~~~i~~qi~~~l~~LH~---~g~iiH~Dikp~NI 180 (237)
T smart00090 109 EAGVPVPKPIAW--RRNVLVMEFIGGDGLPAPRL---KDVEPEEEEEFELYDDILEEMRKLYK---EGELVHGDLSEYNI 180 (237)
T ss_pred hcCCCCCeeeEe--cCceEEEEEecCCccccccc---ccCCcchHHHHHHHHHHHHHHHHHHh---cCCEEeCCCChhhE
Confidence 53 34455543 23579999999988876542 22345666678999999999999999 88 99999999999
Q ss_pred EecCCCcceeecccccccc
Q 003384 595 LLDANFVSKLSDFGISRFL 613 (824)
Q Consensus 595 Lld~~~~vKL~DFGla~~~ 613 (824)
|++ ++.++|+|||++...
T Consensus 181 li~-~~~i~LiDFg~a~~~ 198 (237)
T smart00090 181 LVH-DGKVVIIDVSQSVEL 198 (237)
T ss_pred EEE-CCCEEEEEChhhhcc
Confidence 999 889999999988754
No 426
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.69 E-value=1.4e-16 Score=170.31 Aligned_cols=200 Identities=22% Similarity=0.242 Sum_probs=139.8
Q ss_pred CCCceeeEecccC-----------------------------CceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHH
Q 003384 517 RHPNLVTLVGACP-----------------------------EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIAT 567 (824)
Q Consensus 517 ~HpnIv~L~g~~~-----------------------------~~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~ 567 (824)
+|||||+++++|- ...|+||.-.+. +|+.+|... ..+.....-|+.
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~~----~~s~r~~~~~la 348 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWTR----HRSYRTGRVILA 348 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhcC----CCchHHHHHHHH
Confidence 5999999988761 025788877654 888888432 345567788999
Q ss_pred HHHHHHHHHhhcCCCceEeccccCCcEEe--cCCC--cceeeccccccccccccccCCCccccccCCCCCCcccCChhhh
Q 003384 568 ELCSVLIFLHSCKPHSIVHGDLKPANILL--DANF--VSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFL 643 (824)
Q Consensus 568 qia~aL~~LH~~~~~giiHrDLKp~NILl--d~~~--~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l 643 (824)
|+++|+.|||. +||.|||+|++|||| |.++ .+.|+|||+|---...+...... .......|....||||+.
T Consensus 349 QlLEav~hL~~---hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~--S~~Vd~GGNa~lmAPEi~ 423 (598)
T KOG4158|consen 349 QLLEAVTHLHK---HGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYE--SDEVDLGGNAKLMAPEIA 423 (598)
T ss_pred HHHHHHHHHHH---ccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccc--cccccCCCcceecchhhh
Confidence 99999999999 899999999999999 4444 56899999874322211111111 111344588899999998
Q ss_pred ccCC--C----CcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCCCCChhhHHHHHHHHHHHhhhcc
Q 003384 644 ASGE--L----TPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSR 717 (824)
Q Consensus 644 ~~~~--~----t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~P 717 (824)
...+ . -.++|.|+.|.+.||+++...||....+.... .....+ ...+..|...+..+.+++...|+.+|
T Consensus 424 ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~--~r~Yqe---~qLPalp~~vpp~~rqlV~~lL~r~p 498 (598)
T KOG4158|consen 424 TAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLD--TRTYQE---SQLPALPSRVPPVARQLVFDLLKRDP 498 (598)
T ss_pred hcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheec--hhhhhh---hhCCCCcccCChHHHHHHHHHhcCCc
Confidence 6532 1 24799999999999999999999764432211 111111 12233455667789999999999999
Q ss_pred CCCCChHHHHHHHHH
Q 003384 718 KSRPELGKDVWRVLE 732 (824)
Q Consensus 718 ~~RPt~~~~v~~~Le 732 (824)
.+||+. .+...+|.
T Consensus 499 skRvsp-~iAANvl~ 512 (598)
T KOG4158|consen 499 SKRVSP-NIAANVLN 512 (598)
T ss_pred cccCCc-cHHHhHHH
Confidence 999997 55544443
No 427
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.69 E-value=2e-16 Score=190.17 Aligned_cols=195 Identities=26% Similarity=0.334 Sum_probs=154.1
Q ss_pred hHhhhcCCCCccceeeecCceEEEEEEEC-CeEEEEEEecCCCCCCchhHHHHHHHHHhcCCCcee----eEecc--cCC
Q 003384 458 EIEGATHNFDPSLKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLV----TLVGA--CPE 530 (824)
Q Consensus 458 ei~~~~~~f~~~~~LG~G~fG~Vykg~~~-~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIv----~L~g~--~~~ 530 (824)
+++.....|.+.+.||+|+||.||+|... ++.||+|+-++... =+|.--.+++.+|+ |-++ .+..+ +.+
T Consensus 692 ~~~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~---WEfYI~~q~~~RLk-~~~~~~~~~~~~a~~~~~ 767 (974)
T KOG1166|consen 692 EFEVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNP---WEFYICLQVMERLK-PQMLPSIMHISSAHVFQN 767 (974)
T ss_pred eeeecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCc---eeeeehHHHHHhhc-hhhhcchHHHHHHHccCC
Confidence 34445557888999999999999999875 58899999776542 24544556666776 3333 33322 367
Q ss_pred ceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecC-------CCcce
Q 003384 531 VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDA-------NFVSK 603 (824)
Q Consensus 531 ~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~-------~~~vK 603 (824)
..+||+||.+.|+|.+++. ....+++...+.++.+++..+..||. .+||||||||+|+||.. +.-++
T Consensus 768 ~S~lv~ey~~~Gtlld~~N---~~~~m~e~lv~~~~~qml~ive~lH~---~~IIHgDiKPDNfll~~~~~~~~~~~~l~ 841 (974)
T KOG1166|consen 768 ASVLVSEYSPYGTLLDLIN---TNKVMDEYLVMFFSCQMLRIVEHLHA---MGIIHGDIKPDNFLLRREICADSDSKGLY 841 (974)
T ss_pred cceeeeeccccccHHHhhc---cCCCCCchhhhHHHHHHHHHHHHHHh---cceecccCCcceeEeecccCCCCcccceE
Confidence 8889999999999999994 66779999999999999999999999 78999999999999942 34689
Q ss_pred eeccccccccccccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCC
Q 003384 604 LSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGR 668 (824)
Q Consensus 604 L~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~ 668 (824)
|+|||.+..+.--.. .. ......+|-.+-.+|+..|..++...|.|.|+.+++-||.|+
T Consensus 842 lIDfG~siDm~lfp~---~~---~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~ 900 (974)
T KOG1166|consen 842 LIDFGRSIDMKLFPD---GT---KFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGK 900 (974)
T ss_pred EEecccceeeeEcCC---Cc---EEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHH
Confidence 999999874432111 11 114556899999999999999999999999999999999996
No 428
>PF04564 U-box: U-box domain; InterPro: IPR003613 Quality control of intracellular proteins is essential for cellular homeostasis. Molecular chaperones recognise and contribute to the refolding of misfolded or unfolded proteins, whereas the ubiquitin-proteasome system mediates the degradation of such abnormal proteins. Ubiquitin-protein ligases (E3s) determine the substrate specificity for ubiquitylation and have been classified into HECT and RING-finger families. More recently, however, U-box proteins, which contain a domain (the U box) of about 70 amino acids that is conserved from yeast to humans, have been identified as a new type of E3 []. Members of the U-box family of proteins constitute a class of ubiquitin-protein ligases (E3s) distinct from the HECT-type and RING finger-containing E3 families []. Using yeast two-hybrid technology, all mammalian U-box proteins have been reported to interact with molecular chaperones or co-chaperones, including Hsp90, Hsp70, DnaJc7, EKN1, CRN, and VCP. This suggests that the function of U box-type E3s is to mediate the degradation of unfolded or misfolded proteins in conjunction with molecular chaperones as receptors that recognise such abnormal proteins [, ]. Unlike the RING finger domain, IPR001841 from INTERPRO, that is stabilised by Zn2+ ions coordinated by the cysteines and a histidine, the U-box scaffold is probably stabilised by a system of salt-bridges and hydrogen bonds. The charged and polar residues that participate in this network of bonds are more strongly conserved in the U-box proteins than in classic RING fingers, which supports their role in maintaining the stability of the U box. Thus, the U box appears to have evolved from a RING finger domain by appropriation of a new set of residues required to stabilise its structure, concomitant with the loss of the original, metal-chelating residues [].; GO: 0004842 ubiquitin-protein ligase activity, 0016567 protein ubiquitination, 0000151 ubiquitin ligase complex; PDB: 1T1H_A 2C2L_D 2C2V_V 1WGM_A 2KR4_A 3L1Z_B 3L1X_A 2KRE_A 3M63_A 2QIZ_A ....
Probab=99.69 E-value=1.4e-17 Score=142.58 Aligned_cols=71 Identities=44% Similarity=0.843 Sum_probs=63.1
Q ss_pred CCCCCcccchhhhccCCccccCCccchhhhhhhhhcCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhC
Q 003384 754 PPPYFTCPIFQEVMQDPHVAADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPNLALRSAIQEWLQQH 824 (824)
Q Consensus 754 ~P~~f~cPi~~evm~dPvi~~~g~tye~~~i~~wl~~~~~t~p~t~~~l~~~~l~pn~~lr~~i~~~~~~~ 824 (824)
+|++|.|||+.++|.|||++++|+|||+++|..|+..++.+||+|++++...+|+||.+||++|++|+.+|
T Consensus 1 iP~~f~CpIt~~lM~dPVi~~~G~tyer~~I~~~l~~~~~~~P~t~~~l~~~~l~pn~~Lk~~I~~~~~~~ 71 (73)
T PF04564_consen 1 IPDEFLCPITGELMRDPVILPSGHTYERSAIERWLEQNGGTDPFTRQPLSESDLIPNRALKSAIEEWCAEN 71 (73)
T ss_dssp SSGGGB-TTTSSB-SSEEEETTSEEEEHHHHHHHHCTTSSB-TTT-SB-SGGGSEE-HHHHHHHHHHHHHC
T ss_pred CCcccCCcCcCcHhhCceeCCcCCEEcHHHHHHHHHcCCCCCCCCCCcCCcccceECHHHHHHHHHHHHHc
Confidence 58999999999999999999999999999999999998999999999999999999999999999999986
No 429
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.67 E-value=2.3e-16 Score=185.58 Aligned_cols=136 Identities=28% Similarity=0.378 Sum_probs=111.1
Q ss_pred hcCCCCccceeeecCceEEEEEEECCeEEEEEEecCCCCC--------CchhHHHHHHHHHhcCCCceeeEeccc--CCc
Q 003384 462 ATHNFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQ--------GPSEFQQEIDILSKIRHPNLVTLVGAC--PEV 531 (824)
Q Consensus 462 ~~~~f~~~~~LG~G~fG~Vykg~~~~~~VAvK~l~~~~~~--------~~~~f~~Ei~iL~~l~HpnIv~L~g~~--~~~ 531 (824)
....|...+.||+|+||+||+|.+.+..+++|+....... ....+.+|++++..++|+|++..+.++ .+.
T Consensus 331 ~~~~~~~~~~iG~G~~g~Vy~~~~~~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~ 410 (535)
T PRK09605 331 VKRRKIPDHLIGKGAEADIKKGEYLGRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEE 410 (535)
T ss_pred cccccCccceeccCCcEEEEEEeecCccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCC
Confidence 3445677889999999999999998777766654322111 124578999999999999988765544 456
Q ss_pred eEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccc
Q 003384 532 WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISR 611 (824)
Q Consensus 532 ~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~ 611 (824)
.++||||++|++|.+++. ....++.+++.+|.+||+ .+++||||||+|||+ .++.++|+|||+++
T Consensus 411 ~~lv~E~~~g~~L~~~l~-----------~~~~~~~~i~~~L~~lH~---~giiHrDlkp~NILl-~~~~~~liDFGla~ 475 (535)
T PRK09605 411 KTIVMEYIGGKDLKDVLE-----------GNPELVRKVGEIVAKLHK---AGIVHGDLTTSNFIV-RDDRLYLIDFGLGK 475 (535)
T ss_pred CEEEEEecCCCcHHHHHH-----------HHHHHHHHHHHHHHHHHh---CCCccCCCChHHEEE-ECCcEEEEeCcccc
Confidence 789999999999999883 457789999999999999 899999999999999 57799999999987
Q ss_pred c
Q 003384 612 F 612 (824)
Q Consensus 612 ~ 612 (824)
.
T Consensus 476 ~ 476 (535)
T PRK09605 476 Y 476 (535)
T ss_pred c
Confidence 5
No 430
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.66 E-value=4.5e-17 Score=181.12 Aligned_cols=176 Identities=22% Similarity=0.335 Sum_probs=133.5
Q ss_pred ceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccc
Q 003384 531 VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGIS 610 (824)
Q Consensus 531 ~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla 610 (824)
.+||.|++|.-.+|.++|.++......++.....++.|++.|+.| ++.+|+|+||.||++..+..+||+|||+.
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y------k~~ihrdlkp~nif~~~d~q~kIgDFgl~ 403 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY------KGLIHRDLKPSNIFFSDDDQLKIGDFGLV 403 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh------ccchhhhccccccccccchhhhhhhhhhe
Confidence 478999999999999999877777778888999999999999999 57999999999999999999999999998
Q ss_pred cccccccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHh-CCCCCCCchHHHHHHhhhccccc
Q 003384 611 RFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLT-GRPALGITKEVQYALDTGKLKNL 689 (824)
Q Consensus 611 ~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELlt-G~~Pf~~~~~~~~~~~~~~~~~~ 689 (824)
............ ....+..+||..||+||.+.+..|+.++||||||+||+|+++ =..+|. ..+.+..+
T Consensus 404 ts~~~~~~~~~~--~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~e---------r~~t~~d~ 472 (516)
T KOG1033|consen 404 TSQDKDETVAPA--AASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFE---------RIATLTDI 472 (516)
T ss_pred eecccCCcccch--hhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHH---------HHHhhhhh
Confidence 866555421111 112356789999999999999999999999999999999998 333331 11111121
Q ss_pred cCCCCCCCChhhHHHHHHHHHHHhhhccCCCCCh
Q 003384 690 LDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPEL 723 (824)
Q Consensus 690 ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~ 723 (824)
-+...++......+.-..|+.+++.+.|.+||+.
T Consensus 473 r~g~ip~~~~~d~p~e~~ll~~lls~~p~~RP~~ 506 (516)
T KOG1033|consen 473 RDGIIPPEFLQDYPEEYTLLQQLLSPSPEERPSA 506 (516)
T ss_pred hcCCCChHHhhcCcHHHHHHHHhcCCCcccCchH
Confidence 1111110011112355689999999999999954
No 431
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.66 E-value=4.7e-16 Score=159.19 Aligned_cols=136 Identities=20% Similarity=0.179 Sum_probs=107.2
Q ss_pred CCCccceeeecCceEEEEEEEC-CeEEEEEEecCCCCC----------------------CchhHHHHHHHHHhcCCC--
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQ----------------------GPSEFQQEIDILSKIRHP-- 519 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~-~~~VAvK~l~~~~~~----------------------~~~~f~~Ei~iL~~l~Hp-- 519 (824)
.|...+.||+|+||.||+|... +..||||++...... ....+..|+.++..+.|+
T Consensus 16 ~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 95 (198)
T cd05144 16 VESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGF 95 (198)
T ss_pred hhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCC
Confidence 4677788999999999999874 789999987653210 011256789999999877
Q ss_pred ceeeEecccCCceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCC
Q 003384 520 NLVTLVGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDAN 599 (824)
Q Consensus 520 nIv~L~g~~~~~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~ 599 (824)
.+...++. ...++||||++|++|...... .....++.+++.++.++|. .||+||||||.||+++.+
T Consensus 96 ~v~~~~~~--~~~~lv~e~~~g~~L~~~~~~---------~~~~~~~~~i~~~l~~lh~---~gi~H~Dl~p~Nill~~~ 161 (198)
T cd05144 96 PVPKPIDW--NRHAVVMEYIDGVELYRVRVL---------EDPEEVLDEILEEIVKAYK---HGIIHGDLSEFNILVDDD 161 (198)
T ss_pred CCCceeec--CCceEEEEEeCCcchhhcccc---------ccHHHHHHHHHHHHHHHHH---CCCCcCCCCcccEEEcCC
Confidence 44555543 345899999999999775420 2346788999999999999 899999999999999999
Q ss_pred Ccceeeccccccccc
Q 003384 600 FVSKLSDFGISRFLS 614 (824)
Q Consensus 600 ~~vKL~DFGla~~~~ 614 (824)
+.++|+|||++....
T Consensus 162 ~~~~liDfg~~~~~~ 176 (198)
T cd05144 162 EKIYIIDWPQMVSTD 176 (198)
T ss_pred CcEEEEECCccccCC
Confidence 999999999986443
No 432
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.61 E-value=4.7e-15 Score=142.04 Aligned_cols=132 Identities=20% Similarity=0.278 Sum_probs=112.3
Q ss_pred cceeeecCceEEEEEEECCeEEEEEEecCCCCCCchhHHHHHHHHHhcCC--CceeeEecccCC--ceEEEEEecCCCCh
Q 003384 469 SLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRH--PNLVTLVGACPE--VWTLVYEYLPNGSL 544 (824)
Q Consensus 469 ~~~LG~G~fG~Vykg~~~~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~H--pnIv~L~g~~~~--~~~LV~Ey~~ggsL 544 (824)
.+.||.|+++.||++...+..+++|....... ...+..|+.++..+.| ++++++++++.. ..+++|||++|+++
T Consensus 3 ~~~i~~g~~~~v~~~~~~~~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~~ 80 (155)
T cd05120 3 IKLLKGGLTNRVYLLGTKDEDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGETL 80 (155)
T ss_pred ceecccccccceEEEEecCCeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCeec
Confidence 45799999999999999888999999865432 4579999999999976 588888887743 68999999998877
Q ss_pred hhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccc
Q 003384 545 EDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRF 612 (824)
Q Consensus 545 ~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~ 612 (824)
..+ +......++.+++.+|.+||.....+++|+||+|.|||++.++.++++|||++..
T Consensus 81 ~~~----------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 81 DEV----------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred ccC----------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 543 4467778899999999999997656899999999999999989999999998764
No 433
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.53 E-value=4.6e-14 Score=148.97 Aligned_cols=132 Identities=20% Similarity=0.218 Sum_probs=103.7
Q ss_pred ceee-ecCceEEEEEEECCeEEEEEEecCCCC-------------CCchhHHHHHHHHHhcCCCce--eeEecccCC---
Q 003384 470 LKIG-EGGYGSIYKGLLRHMQVAIKMLHPHSL-------------QGPSEFQQEIDILSKIRHPNL--VTLVGACPE--- 530 (824)
Q Consensus 470 ~~LG-~G~fG~Vykg~~~~~~VAvK~l~~~~~-------------~~~~~f~~Ei~iL~~l~HpnI--v~L~g~~~~--- 530 (824)
..|| .||.|+||.+...+..++||.+..... .....+.+|+.++..|.|++| +..++++..
T Consensus 37 ~~lg~~~g~gtv~~v~~~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~~ 116 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQTPGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRHG 116 (239)
T ss_pred ceeecCCCCccEEEEEeCCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeecC
Confidence 4688 899999999988889999998853210 122457889999999998875 666665421
Q ss_pred ---ceEEEEEecCC-CChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeec
Q 003384 531 ---VWTLVYEYLPN-GSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSD 606 (824)
Q Consensus 531 ---~~~LV~Ey~~g-gsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~D 606 (824)
..++||||++| .+|.+++.. .+++.. .+.+++.+|.+||. +||+||||||.|||++.++.++|+|
T Consensus 117 ~~~~~~lV~e~l~G~~~L~~~l~~----~~l~~~----~~~~i~~~l~~lH~---~GI~HrDlkp~NILv~~~~~v~LID 185 (239)
T PRK01723 117 LFYRADILIERIEGARDLVALLQE----APLSEE----QWQAIGQLIARFHD---AGVYHADLNAHNILLDPDGKFWLID 185 (239)
T ss_pred cceeeeEEEEecCCCCCHHHHHhc----CCCCHH----HHHHHHHHHHHHHH---CCCCCCCCCchhEEEcCCCCEEEEE
Confidence 23599999997 689888742 234443 35689999999999 8999999999999999999999999
Q ss_pred cccccc
Q 003384 607 FGISRF 612 (824)
Q Consensus 607 FGla~~ 612 (824)
||.+..
T Consensus 186 fg~~~~ 191 (239)
T PRK01723 186 FDRGEL 191 (239)
T ss_pred CCCccc
Confidence 998764
No 434
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.53 E-value=3.1e-14 Score=143.76 Aligned_cols=137 Identities=18% Similarity=0.189 Sum_probs=96.4
Q ss_pred cceeeecCceEEEEEEEC-CeEEEEEEecCCCCCC--chh----------------------HHHHHHHHHhcCCCc--e
Q 003384 469 SLKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQG--PSE----------------------FQQEIDILSKIRHPN--L 521 (824)
Q Consensus 469 ~~~LG~G~fG~Vykg~~~-~~~VAvK~l~~~~~~~--~~~----------------------f~~Ei~iL~~l~Hpn--I 521 (824)
.+.||+|+||.||+|... +..||||++....... ... ...|...+..+.+.+ +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 357999999999999887 7899999987542211 111 135666666664432 4
Q ss_pred eeEecccCCceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCc
Q 003384 522 VTLVGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFV 601 (824)
Q Consensus 522 v~L~g~~~~~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~ 601 (824)
.+.+++ ...++||||++|+++........ ... .....++.+++.++.++|.. .+|+||||||+||+++ ++.
T Consensus 82 ~~~~~~--~~~~lv~e~~~g~~~~~~~l~~~---~~~-~~~~~~~~~~~~~l~~lh~~--~~ivH~Dl~p~Nili~-~~~ 152 (187)
T cd05119 82 PKPIDL--NRHVLVMEFIGGDGIPAPRLKDV---RLL-EDPEELYDQILELMRKLYRE--AGLVHGDLSEYNILVD-DGK 152 (187)
T ss_pred CceEec--CCCEEEEEEeCCCCccChhhhhh---hhc-ccHHHHHHHHHHHHHHHhhc--cCcCcCCCChhhEEEE-CCc
Confidence 444443 24589999999965432111000 011 46778899999999999973 4799999999999999 899
Q ss_pred ceeeccccccccc
Q 003384 602 SKLSDFGISRFLS 614 (824)
Q Consensus 602 vKL~DFGla~~~~ 614 (824)
++|+|||.+....
T Consensus 153 ~~liDfg~a~~~~ 165 (187)
T cd05119 153 VYIIDVPQAVEID 165 (187)
T ss_pred EEEEECccccccc
Confidence 9999999986543
No 435
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.45 E-value=9.5e-15 Score=172.38 Aligned_cols=244 Identities=26% Similarity=0.372 Sum_probs=178.1
Q ss_pred CCCCccceeeecCceEEEEEEEC---CeEEEEEEecCCC--CCCchhHHHHHHHHHhcC-CCceeeEeccc--CCceEEE
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLLR---HMQVAIKMLHPHS--LQGPSEFQQEIDILSKIR-HPNLVTLVGAC--PEVWTLV 535 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~~---~~~VAvK~l~~~~--~~~~~~f~~Ei~iL~~l~-HpnIv~L~g~~--~~~~~LV 535 (824)
..|...+.||+|+|+.|-..... ...+|+|.+.... .........|..+-..+. |+|++.+++.. .+..+++
T Consensus 20 ~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~ 99 (601)
T KOG0590|consen 20 SQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLS 99 (601)
T ss_pred ccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCcccccc
Confidence 35777788999999999766543 3457777665443 222334556888888887 99999999987 4567899
Q ss_pred EEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHh-hcCCCceEeccccCCcEEecCCC-cceeecccccccc
Q 003384 536 YEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLH-SCKPHSIVHGDLKPANILLDANF-VSKLSDFGISRFL 613 (824)
Q Consensus 536 ~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH-~~~~~giiHrDLKp~NILld~~~-~vKL~DFGla~~~ 613 (824)
++|..||++.+.+... .....+....-.++.++..+|.|+| . .++.||||||+|.+++.++ .+|++|||+|..+
T Consensus 100 ~~~s~g~~~f~~i~~~-~~~~~~~~~~~~~~~ql~s~l~~~H~~---~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~ 175 (601)
T KOG0590|consen 100 LSYSDGGSLFSKISHP-DSTGTSSSSASRYLPQLNSGLSYLHPE---NGVTHRDIKPSNSLLDESGSALKIADFGLATAY 175 (601)
T ss_pred cCcccccccccccccC-CccCCCCcchhhhhhhhccCccccCcc---cccccCCCCCccchhccCCCcccCCCchhhccc
Confidence 9999999998887311 1113444566788999999999999 6 7899999999999999999 9999999999877
Q ss_pred cc-ccccCCCccccccCCCCC-CcccCChhhhccC-CCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhcccccc
Q 003384 614 SQ-NEISSNNTTLCCRTDPKG-TFAYMDPEFLASG-ELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLL 690 (824)
Q Consensus 614 ~~-~~~~~~~~~~~~~~~~~G-T~~Y~APE~l~~~-~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~l 690 (824)
.. .+.... .....| ++.|+|||.+.+. ...+..|+||.|+++.-+++|..|+....... +....+.
T Consensus 176 ~~~~g~~~~------~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~-----~~~~~~~ 244 (601)
T KOG0590|consen 176 RNKNGAERS------LKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKD-----GRYSSWK 244 (601)
T ss_pred cccCCccee------eecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcccccccc-----ccceeec
Confidence 65 321111 133457 9999999999885 45677899999999999999999986543221 1111111
Q ss_pred CC----CCCCCChhhHHHHHHHHHHHhhhccCCCCCh
Q 003384 691 DP----LAGDWPFVQAEQLANLAMRCCEMSRKSRPEL 723 (824)
Q Consensus 691 d~----~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~ 723 (824)
.. ....| ........+++..++..+|..|.+.
T Consensus 245 ~~~~~~~~~~~-~~~~~~~~~~l~k~l~~~~~~r~s~ 280 (601)
T KOG0590|consen 245 SNKGRFTQLPW-NSISDQAHDLLHKILKENPSNRLSI 280 (601)
T ss_pred ccccccccCcc-ccCChhhhhcccccccCCchhcccc
Confidence 11 01111 2334567788888888999999987
No 436
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.35 E-value=2.8e-12 Score=127.08 Aligned_cols=129 Identities=18% Similarity=0.144 Sum_probs=99.1
Q ss_pred ceeeecCceEEEEEEECCeEEEEEEecCCCCCCchhHHHHHHHHHhcCCCce-eeEecccCCceEEEEEecCCCChhhhh
Q 003384 470 LKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNL-VTLVGACPEVWTLVYEYLPNGSLEDRL 548 (824)
Q Consensus 470 ~~LG~G~fG~Vykg~~~~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnI-v~L~g~~~~~~~LV~Ey~~ggsL~~~L 548 (824)
+.|+.|.++.||++...+..|++|+...... ....+..|+.++..+.+.++ .++++.+....++||||++|.++.+..
T Consensus 4 ~~l~~G~~~~vy~~~~~~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~~~~~~lv~e~i~G~~l~~~~ 82 (170)
T cd05151 4 SPLKGGMTNKNYRVEVANKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFDPETGVLITEFIEGSELLTED 82 (170)
T ss_pred eecCCcccCceEEEEECCeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEeCCCCeEEEEecCCCcccccc
Confidence 4689999999999999899999998765432 22357899999999865444 456666665678999999998876431
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHHhhcC--CCceEeccccCCcEEecCCCcceeecccccc
Q 003384 549 SCKDNSPPLSWQTRIRIATELCSVLIFLHSCK--PHSIVHGDLKPANILLDANFVSKLSDFGISR 611 (824)
Q Consensus 549 ~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~--~~giiHrDLKp~NILld~~~~vKL~DFGla~ 611 (824)
. ....++.+++.+|..||... +.+++|+|++|.||+++ ++.++++|||.+.
T Consensus 83 --------~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~ 135 (170)
T cd05151 83 --------F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAG 135 (170)
T ss_pred --------c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEeccccc
Confidence 0 11345678999999999943 23469999999999999 6689999999765
No 437
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.32 E-value=3.3e-12 Score=146.32 Aligned_cols=137 Identities=23% Similarity=0.284 Sum_probs=96.4
Q ss_pred ceeeecCceEEEEEEEC-CeEEEEEEecCCCCCC--------------------------c--------------hhHHH
Q 003384 470 LKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQG--------------------------P--------------SEFQQ 508 (824)
Q Consensus 470 ~~LG~G~fG~Vykg~~~-~~~VAvK~l~~~~~~~--------------------------~--------------~~f~~ 508 (824)
..||.|++|.||+|++. |..||||+.++..... . -.|.+
T Consensus 123 ~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~ 202 (437)
T TIGR01982 123 KPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRR 202 (437)
T ss_pred cceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHH
Confidence 57999999999999885 7899999987642110 0 02445
Q ss_pred HHHHHHhcC-----CCce--eeEecccCCceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHH-HHHHHhhcC
Q 003384 509 EIDILSKIR-----HPNL--VTLVGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCS-VLIFLHSCK 580 (824)
Q Consensus 509 Ei~iL~~l~-----HpnI--v~L~g~~~~~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~-aL~~LH~~~ 580 (824)
|...+.++. +++| .+++..+....+|||||++|++|.+++..... .+ .+..++..++. .+..+|.
T Consensus 203 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~--~~---~~~~ia~~~~~~~l~ql~~-- 275 (437)
T TIGR01982 203 EAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEA--GL---DRKALAENLARSFLNQVLR-- 275 (437)
T ss_pred HHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhc--CC---CHHHHHHHHHHHHHHHHHh--
Confidence 665555552 3332 23333333457899999999999887642211 12 23456666655 4667777
Q ss_pred CCceEeccccCCcEEecCCCcceeeccccccccc
Q 003384 581 PHSIVHGDLKPANILLDANFVSKLSDFGISRFLS 614 (824)
Q Consensus 581 ~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~ 614 (824)
.|++|+|++|.||+++.++.++|+|||++..+.
T Consensus 276 -~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 276 -DGFFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred -CCceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 899999999999999999999999999987654
No 438
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.29 E-value=1.8e-12 Score=136.56 Aligned_cols=209 Identities=23% Similarity=0.323 Sum_probs=143.9
Q ss_pred HHHHHHHHhcCCCceeeEecccCC-------ceEEEEEecCCCChhhhhhcc-CCCCCCCHHHHHHHHHHHHHHHHHHhh
Q 003384 507 QQEIDILSKIRHPNLVTLVGACPE-------VWTLVYEYLPNGSLEDRLSCK-DNSPPLSWQTRIRIATELCSVLIFLHS 578 (824)
Q Consensus 507 ~~Ei~iL~~l~HpnIv~L~g~~~~-------~~~LV~Ey~~ggsL~~~L~~~-~~~~~l~~~~~~~ia~qia~aL~~LH~ 578 (824)
..-..-|-++.|.|||+++.++.+ ...++.||+..|+|..+|... .....+......+|+.||..||.|||+
T Consensus 115 ~~vFdnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs 194 (458)
T KOG1266|consen 115 RAVFDNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHS 194 (458)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhc
Confidence 334455667789999999998843 345889999999999999653 345567788888999999999999999
Q ss_pred cCCCceEeccccCCcEEecCCCcceeeccccccccccccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHH
Q 003384 579 CKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFG 658 (824)
Q Consensus 579 ~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlG 658 (824)
+.| +|+|+++..+-|++..+|-+||+--.-.. .. ..........+....|-++|.+||+-.....+.++|||+||
T Consensus 195 ~~P-piihgnlTc~tifiq~ngLIkig~~ap~s-~h---~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fg 269 (458)
T KOG1266|consen 195 CDP-PIIHGNLTCDTIFIQHNGLIKIGSVAPDS-TH---PSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFG 269 (458)
T ss_pred cCC-ccccCCcchhheeecCCceEEecccCccc-cc---hhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhh
Confidence 885 89999999999999999998875322111 00 01111111222345678999999997777788899999999
Q ss_pred HHHHHHHhCCCCC-CCchHHHHHHhhhccccccCCCCCCCChhhHHHHHHHHHHHhhhccCCCCChHHHHHHH
Q 003384 659 IILLRLLTGRPAL-GITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGKDVWRV 730 (824)
Q Consensus 659 vvL~ELltG~~Pf-~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~~v~~~ 730 (824)
+..++|..|..-- .....+.. .. .....+-.+ ....-+.++..|++..|..||+++..++..
T Consensus 270 mcAlemailEiq~tnseS~~~~--ee-~ia~~i~~l-------en~lqr~~i~kcl~~eP~~rp~ar~llfHp 332 (458)
T KOG1266|consen 270 MCALEMAILEIQSTNSESKVEV--EE-NIANVIIGL-------ENGLQRGSITKCLEGEPNGRPDARLLLFHP 332 (458)
T ss_pred HHHHHHHHheeccCCCcceeeh--hh-hhhhheeec-------cCccccCcCcccccCCCCCCcchhhhhcCc
Confidence 9999999876432 11111110 00 011111001 111235677899999999999997666443
No 439
>cd01989 STK_N The N-terminal domain of Eukaryotic Serine Threonine kinases. The Serine Threonine kinases are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. The N-terminal domain is homologous to the USP family which has a ATP binding fold. The N-terminal domain is predicted to be involved in ATP binding.
Probab=99.22 E-value=1.2e-10 Score=112.91 Aligned_cols=96 Identities=33% Similarity=0.560 Sum_probs=81.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCeeeEEEEeecCchHHHHHHHHHHcCCCEEEeccCcCccchhhhcccchhhHH
Q 003384 38 KVQAYREIERQDMHNHLDMCLLICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKAI 117 (824)
Q Consensus 38 ~v~~~~~~e~~~~~~~l~~~~~~C~~~~V~~~~~~ie~~dv~~~i~e~i~~~~i~~LV~Ga~~~~~~~~~~~~~~s~~a~ 117 (824)
....+..+.+++.+++|+++...|...+++++..+++.++++++|++++.+++++.+|||++..+...+.. +.|.-|.
T Consensus 51 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~I~~~a~~~~~dlIV~Gs~g~~~l~~~~--~gssva~ 128 (146)
T cd01989 51 VASAYKQEEDKEAKELLLPYRCFCSRKGVQCEDVVLEDDDVAKAIVEYVADHGITKLVMGASSDNHFSMKF--KKSDVAS 128 (146)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEEEeCCcHHHHHHHHHHHcCCCEEEEeccCCCceeecc--cCCchhH
Confidence 34567777888899999999999999999999999998899999999999999999999999444443332 2234677
Q ss_pred hhhccCCCccEEEEEecC
Q 003384 118 SVRQQAPASCHIWFICNG 135 (824)
Q Consensus 118 ~v~~~a~~~C~v~~i~~g 135 (824)
.|++++|++|.|.+|++|
T Consensus 129 ~Vi~~a~~~c~Vlvv~~~ 146 (146)
T cd01989 129 SVLKEAPDFCTVYVVSKG 146 (146)
T ss_pred HHHhcCCCCceEEEEeCc
Confidence 999999999999999998
No 440
>smart00504 Ubox Modified RING finger domain. Modified RING finger domain, without the full complement of Zn2+-binding ligands. Probable involvement in E2-dependent ubiquitination.
Probab=99.16 E-value=2.1e-11 Score=101.23 Aligned_cols=63 Identities=57% Similarity=0.993 Sum_probs=60.4
Q ss_pred CCcccchhhhccCCccccCCccchhhhhhhhhcCCCCCCCCCCCCCCCCCCCchHHHHHHHHHH
Q 003384 757 YFTCPIFQEVMQDPHVAADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPNLALRSAIQEW 820 (824)
Q Consensus 757 ~f~cPi~~evm~dPvi~~~g~tye~~~i~~wl~~~~~t~p~t~~~l~~~~l~pn~~lr~~i~~~ 820 (824)
+|.|||+.++|.||+++..|++|++..|.+|+.. +.+||+|+.++...+|+||.+||++|++|
T Consensus 1 ~~~Cpi~~~~~~~Pv~~~~G~v~~~~~i~~~~~~-~~~cP~~~~~~~~~~l~~~~~l~~~i~~~ 63 (63)
T smart00504 1 EFLCPISLEVMKDPVILPSGQTYERRAIEKWLLS-HGTDPVTGQPLTHEDLIPNLALKSAIQEW 63 (63)
T ss_pred CcCCcCCCCcCCCCEECCCCCEEeHHHHHHHHHH-CCCCCCCcCCCChhhceeCHHHHHHHHhC
Confidence 4789999999999999999999999999999988 77999999999999999999999999998
No 441
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.14 E-value=2.6e-11 Score=144.09 Aligned_cols=251 Identities=22% Similarity=0.221 Sum_probs=169.3
Q ss_pred CCCCccceeeecCceEEEEEEECC--eEEEEEEecCCC---CCCchhHHHHHHHHHhcCCCceeeEecc--cCCceEEEE
Q 003384 464 HNFDPSLKIGEGGYGSIYKGLLRH--MQVAIKMLHPHS---LQGPSEFQQEIDILSKIRHPNLVTLVGA--CPEVWTLVY 536 (824)
Q Consensus 464 ~~f~~~~~LG~G~fG~Vykg~~~~--~~VAvK~l~~~~---~~~~~~f~~Ei~iL~~l~HpnIv~L~g~--~~~~~~LV~ 536 (824)
..|.+.+-+-.|.||.++.+.-.+ ...++|+..... ....+....+-.++-.-++|-++..+.. |....+||+
T Consensus 804 d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L~~ 883 (1205)
T KOG0606|consen 804 DGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPLVG 883 (1205)
T ss_pred ccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcchhh
Confidence 345666678889999998765432 334444332211 1112233444444444456777777666 566789999
Q ss_pred EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccc
Q 003384 537 EYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQN 616 (824)
Q Consensus 537 Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~ 616 (824)
+|+.|++|...|+.. +..+..........+..++++||. ..++|+|++|.|+|...+|+.+++|||+.......
T Consensus 884 ~~~~~~~~~Skl~~~---~~~saepaRs~i~~~vqs~e~L~s---~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~ 957 (1205)
T KOG0606|consen 884 HYLNGGDLPSKLHNS---GCLSAEPARSPILERVQSLESLHS---SLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLI 957 (1205)
T ss_pred HHhccCCchhhhhcC---CCcccccccchhHHHHhhhhcccc---chhhcccccccchhhcccCCcccCccccccccccc
Confidence 999999999988533 345544555566778889999999 56899999999999999999999999944322110
Q ss_pred ----cc----c-------------CCCcc--ccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCC
Q 003384 617 ----EI----S-------------SNNTT--LCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGI 673 (824)
Q Consensus 617 ----~~----~-------------~~~~~--~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~ 673 (824)
.. . ..... ........||+.|.+||.+.+...+..+|+|++|++++|.++|.+||..
T Consensus 958 ~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na 1037 (1205)
T KOG0606|consen 958 PPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNA 1037 (1205)
T ss_pred cCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCC
Confidence 00 0 00000 0112456799999999999999999999999999999999999999976
Q ss_pred chHHHHHHhhhccccccCCCCCCCChhhHHHHHHHHHHHhhhccCCCCChH
Q 003384 674 TKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELG 724 (824)
Q Consensus 674 ~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~ 724 (824)
...-+.. .+ +... +.....-+...+....+++.+.+..+|.+|-.+.
T Consensus 1038 ~tpq~~f--~n-i~~~-~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1038 ETPQQIF--EN-ILNR-DIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred cchhhhh--hc-cccC-CCCCCCCccccChhhhhhhhhhhccCchhccCcc
Confidence 5432221 11 1111 1112223444567889999999999999998873
No 442
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.11 E-value=6.4e-10 Score=114.69 Aligned_cols=139 Identities=22% Similarity=0.324 Sum_probs=109.0
Q ss_pred ceeeecCceEEEEEEECC-eEEEEEEecCCCC-CCchhHHHHHHHHHhcCC--CceeeEecccCC-----ceEEEEEecC
Q 003384 470 LKIGEGGYGSIYKGLLRH-MQVAIKMLHPHSL-QGPSEFQQEIDILSKIRH--PNLVTLVGACPE-----VWTLVYEYLP 540 (824)
Q Consensus 470 ~~LG~G~fG~Vykg~~~~-~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l~H--pnIv~L~g~~~~-----~~~LV~Ey~~ 540 (824)
..||.|.++.||++...+ ..+++|+...... .....+..|+.++..+.+ .++.++++++.+ ..++||||++
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~ 83 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD 83 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence 468999999999998876 8899999765432 134578999999999975 345667777644 4589999999
Q ss_pred CCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcC----------------------------------------
Q 003384 541 NGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK---------------------------------------- 580 (824)
Q Consensus 541 ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~---------------------------------------- 580 (824)
|.+|.+.+.. ..++...+..++.+++.+|..||+..
T Consensus 84 G~~l~~~~~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (223)
T cd05154 84 GRVLRDRLLR----PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMER 159 (223)
T ss_pred CEecCCCCCC----CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHH
Confidence 9988776521 34677788888889999999998531
Q ss_pred -------------CCceEeccccCCcEEecC--CCcceeeccccccc
Q 003384 581 -------------PHSIVHGDLKPANILLDA--NFVSKLSDFGISRF 612 (824)
Q Consensus 581 -------------~~giiHrDLKp~NILld~--~~~vKL~DFGla~~ 612 (824)
+..++|+|+.|.|||++. ++.+.|+||+.+..
T Consensus 160 ~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 160 LLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 246799999999999998 66789999997653
No 443
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.10 E-value=8.8e-11 Score=133.64 Aligned_cols=242 Identities=25% Similarity=0.274 Sum_probs=169.2
Q ss_pred CCCccceeee--cCceEEEEEEE--C--CeEEEEEEecCC--CCCCchhHHHHHHHHHhcC-CCceeeEecccCC--ceE
Q 003384 465 NFDPSLKIGE--GGYGSIYKGLL--R--HMQVAIKMLHPH--SLQGPSEFQQEIDILSKIR-HPNLVTLVGACPE--VWT 533 (824)
Q Consensus 465 ~f~~~~~LG~--G~fG~Vykg~~--~--~~~VAvK~l~~~--~~~~~~~f~~Ei~iL~~l~-HpnIv~L~g~~~~--~~~ 533 (824)
.|.....+|. |.+|.||.+.. . ...+|+|.-+.. .......=.+|+....+++ |+|.++.+..+.. ..+
T Consensus 115 ~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lf 194 (524)
T KOG0601|consen 115 RFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILF 194 (524)
T ss_pred hcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcce
Confidence 4566677999 99999999887 3 367898874332 2223333456777777774 9999997777743 456
Q ss_pred EEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHH----HHHHHhhcCCCceEeccccCCcEEecCC-Ccceeeccc
Q 003384 534 LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCS----VLIFLHSCKPHSIVHGDLKPANILLDAN-FVSKLSDFG 608 (824)
Q Consensus 534 LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~----aL~~LH~~~~~giiHrDLKp~NILld~~-~~vKL~DFG 608 (824)
+-.|++ +.+|..+.+... ..++....+.+..+... ||.++|. .+++|-|+||.||++..+ ...+++|||
T Consensus 195 iqtE~~-~~sl~~~~~~~~--~~~p~~~l~~~~~~~~~~~~~al~~~hs---~~~~~~~~kp~~i~~~~~~~s~~~~df~ 268 (524)
T KOG0601|consen 195 IQTELC-GESLQSYCHTPC--NFLPDNLLWNSLRDWLSRDVTALSHLHS---NNIVHDDLKPANIFTTSDWTSCKLTDFG 268 (524)
T ss_pred eeeccc-cchhHHhhhccc--ccCCchhhhhHHhhhhhcccccccccCC---CcccccccchhheecccccceeecCCcc
Confidence 667777 578877775332 23555666777777777 9999999 789999999999999998 789999999
Q ss_pred cccccccccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCc-hHHHHHHhhhccc
Q 003384 609 ISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGIT-KEVQYALDTGKLK 687 (824)
Q Consensus 609 la~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~-~~~~~~~~~~~~~ 687 (824)
+...+........... .....|...|++||.+. +-++...|+|++|.++++-.+|..+.... ...+..++.+
T Consensus 269 ~v~~i~~~~~~~~~~~---~~r~~~~~~Y~~ke~~~-~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~--- 341 (524)
T KOG0601|consen 269 LVSKISDGNFSSVFKV---SKRPEGDCIYAAKELLN-GLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQG--- 341 (524)
T ss_pred eeEEccCCccccceee---eecCCCCceEeChhhhc-cccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccc---
Confidence 9998877664433221 13446888999999864 56788999999999999999987655322 1111111111
Q ss_pred cccCCCCCCCChhhHHHHHHHHHHHhhhccCCCCCh
Q 003384 688 NLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPEL 723 (824)
Q Consensus 688 ~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~ 723 (824)
+.+ .++-......+...+.++++.+|..|++.
T Consensus 342 --~ip--~e~~~~~s~~l~~~~~~~~d~~~~~~~~~ 373 (524)
T KOG0601|consen 342 --YIP--LEFCEGGSSSLRSVTSQMLDEDPRLRLTA 373 (524)
T ss_pred --cCc--hhhhcCcchhhhhHHHHhcCcchhhhhHH
Confidence 111 11222234456668899999999998886
No 444
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.10 E-value=5.9e-10 Score=110.52 Aligned_cols=128 Identities=28% Similarity=0.397 Sum_probs=101.5
Q ss_pred eeeecCceEEEEEEECCeEEEEEEecCCCCCCc--------hhHHHHHHHHHhcCC--CceeeEecccCCceEEEEEecC
Q 003384 471 KIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGP--------SEFQQEIDILSKIRH--PNLVTLVGACPEVWTLVYEYLP 540 (824)
Q Consensus 471 ~LG~G~fG~Vykg~~~~~~VAvK~l~~~~~~~~--------~~f~~Ei~iL~~l~H--pnIv~L~g~~~~~~~LV~Ey~~ 540 (824)
.|++|+-+.+|.+.+.+.++++|.-.+.....+ ..-.+|..+|.+++- -+...++++.++...|+|||++
T Consensus 3 ~i~~GAEa~i~~~~~~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~I~ 82 (204)
T COG3642 3 LIKQGAEAIIYLTDFLGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEYIE 82 (204)
T ss_pred hhhCCcceeEEeeeccCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEEeC
Confidence 588999999999988887888886554433322 235679999998853 3445567777788889999999
Q ss_pred CCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccc
Q 003384 541 NGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRF 612 (824)
Q Consensus 541 ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~ 612 (824)
|..|.+.+... ...++..+-.-+.-||. .||||+||.++||++..+. +.++||||+.+
T Consensus 83 G~~lkd~l~~~----------~~~~~r~vG~~vg~lH~---~givHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 83 GELLKDALEEA----------RPDLLREVGRLVGKLHK---AGIVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred ChhHHHHHHhc----------chHHHHHHHHHHHHHHh---cCeecCCCccceEEEeCCc-EEEEECCcccc
Confidence 99999888422 35677788888999999 8999999999999998765 89999999874
No 445
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.09 E-value=2.1e-10 Score=133.42 Aligned_cols=144 Identities=19% Similarity=0.269 Sum_probs=90.1
Q ss_pred CCCccceeeecCceEEEEEEEC--CeEEEEEEecCCCCC--------------------------Cc--------h----
Q 003384 465 NFDPSLKIGEGGYGSIYKGLLR--HMQVAIKMLHPHSLQ--------------------------GP--------S---- 504 (824)
Q Consensus 465 ~f~~~~~LG~G~fG~Vykg~~~--~~~VAvK~l~~~~~~--------------------------~~--------~---- 504 (824)
.|+. ..||.|++|.||+|+++ |+.||||+.++.... +. +
T Consensus 121 ~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ 199 (537)
T PRK04750 121 DFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHD 199 (537)
T ss_pred hcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHH
Confidence 4565 67999999999999885 689999999864210 00 0
Q ss_pred --hHHHHHHHHHhcC----CCcee---eEecccCCceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHH
Q 003384 505 --EFQQEIDILSKIR----HPNLV---TLVGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIF 575 (824)
Q Consensus 505 --~f~~Ei~iL~~l~----HpnIv---~L~g~~~~~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~ 575 (824)
.|.+|+..+.++. +.+.+ ++|.-+....+|||||+.|+.|.++-.-... ..+. ..++...+. .|
T Consensus 200 ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~--g~d~---~~la~~~v~--~~ 272 (537)
T PRK04750 200 ELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAA--GTDM---KLLAERGVE--VF 272 (537)
T ss_pred hhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhc--CCCH---HHHHHHHHH--HH
Confidence 1344554444442 33222 2333223456799999999999774211111 1111 112222221 12
Q ss_pred HhhcCCCceEeccccCCcEEecCCC----cceeeccccccccccc
Q 003384 576 LHSCKPHSIVHGDLKPANILLDANF----VSKLSDFGISRFLSQN 616 (824)
Q Consensus 576 LH~~~~~giiHrDLKp~NILld~~~----~vKL~DFGla~~~~~~ 616 (824)
+++....|++|+|++|.||+++.+| .++++|||++..+...
T Consensus 273 ~~Qif~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~~ 317 (537)
T PRK04750 273 FTQVFRDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNKE 317 (537)
T ss_pred HHHHHhCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCHH
Confidence 2222227899999999999999888 9999999999877543
No 446
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.07 E-value=1.1e-09 Score=111.67 Aligned_cols=134 Identities=16% Similarity=0.142 Sum_probs=95.9
Q ss_pred ceeeecCceEEEEEEEC--------CeEEEEEEecCCCC--C-------------------C-chhHH----HHHHHHHh
Q 003384 470 LKIGEGGYGSIYKGLLR--------HMQVAIKMLHPHSL--Q-------------------G-PSEFQ----QEIDILSK 515 (824)
Q Consensus 470 ~~LG~G~fG~Vykg~~~--------~~~VAvK~l~~~~~--~-------------------~-~~~f~----~Ei~iL~~ 515 (824)
..||.|--+.||.|... +..+|||+.+.... . + ...+. +|+..|++
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 35899999999999754 26899999754210 0 0 11233 79999999
Q ss_pred cCC--CceeeEecccCCceEEEEEecCCCChhh-hhhccCCCCCCCHHHHHHHHHHHHHHHHHH-hhcCCCceEeccccC
Q 003384 516 IRH--PNLVTLVGACPEVWTLVYEYLPNGSLED-RLSCKDNSPPLSWQTRIRIATELCSVLIFL-HSCKPHSIVHGDLKP 591 (824)
Q Consensus 516 l~H--pnIv~L~g~~~~~~~LV~Ey~~ggsL~~-~L~~~~~~~~l~~~~~~~ia~qia~aL~~L-H~~~~~giiHrDLKp 591 (824)
+.. -++.+++++ ...+|||||+.++.+.. .|. ...++......+..+++.+|..| |. .|||||||++
T Consensus 83 l~~~Gv~vP~pi~~--~~~~lvME~Ig~~~~~~~~Lk----d~~~~~~~~~~i~~~i~~~l~~l~H~---~glVHGDLs~ 153 (197)
T cd05146 83 MQKAGIPCPEVVVL--KKHVLVMSFIGDDQVPAPKLK----DAKLNDEEMKNAYYQVLSMMKQLYKE---CNLVHADLSE 153 (197)
T ss_pred HHHcCCCCCeEEEe--cCCEEEEEEcCCCCccchhhh----ccccCHHHHHHHHHHHHHHHHHHHHh---CCeecCCCCH
Confidence 853 455556654 56789999997654422 221 12344456677889999999988 77 7899999999
Q ss_pred CcEEecCCCcceeecccccccc
Q 003384 592 ANILLDANFVSKLSDFGISRFL 613 (824)
Q Consensus 592 ~NILld~~~~vKL~DFGla~~~ 613 (824)
.|||++ ++.++|+|||.+-..
T Consensus 154 ~NIL~~-~~~v~iIDF~qav~~ 174 (197)
T cd05146 154 YNMLWH-DGKVWFIDVSQSVEP 174 (197)
T ss_pred HHEEEE-CCcEEEEECCCceeC
Confidence 999997 467999999987644
No 447
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.98 E-value=4.8e-09 Score=103.64 Aligned_cols=141 Identities=21% Similarity=0.245 Sum_probs=102.5
Q ss_pred ccceeeecCceEEEEEEECCeEEEEEEecCCCCCC--------chhHHHHHHHHHhcCCCc--eeeEecccCCceEEEEE
Q 003384 468 PSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQG--------PSEFQQEIDILSKIRHPN--LVTLVGACPEVWTLVYE 537 (824)
Q Consensus 468 ~~~~LG~G~fG~Vykg~~~~~~VAvK~l~~~~~~~--------~~~f~~Ei~iL~~l~Hpn--Iv~L~g~~~~~~~LV~E 537 (824)
....|-+|+-+.|+++.+.|..+.||.-....... .....+|+.+|.++.--. ..+++-+-.....|+||
T Consensus 11 ~l~likQGAEArv~~~~~~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~ME 90 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFSGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYME 90 (229)
T ss_pred cceeeeccceeeEeeeccCCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEEE
Confidence 45679999999999999999998888654332222 234678999999886322 23333333456789999
Q ss_pred ecCC-CChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCC---cceeeccccccc
Q 003384 538 YLPN-GSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANF---VSKLSDFGISRF 612 (824)
Q Consensus 538 y~~g-gsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~---~vKL~DFGla~~ 612 (824)
|++| .++.+++......... ......++..|-+.|.-||. ++||||||..+||+|..++ .+.++|||++..
T Consensus 91 ~~~g~~~vk~~i~~~~~~~~~-d~~~~~~~~~iG~~igklH~---ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 91 FIDGASTVKDFILSTMEDESE-DEGLAELARRIGELIGKLHD---NDIIHGDLTTSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred eccchhHHHHHHHHHccCccc-chhHHHHHHHHHHHHHHhhh---CCeecccccccceEEecCCCcCceEEEeecchhc
Confidence 9987 3777777544333222 23346788899999999999 8899999999999996544 458999999753
No 448
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=98.96 E-value=5.3e-10 Score=127.37 Aligned_cols=235 Identities=24% Similarity=0.252 Sum_probs=163.6
Q ss_pred hcCCCCccceeeecCceEEEEEEEC---CeEEEEEEecCCCCCCchhH--HHHHHHHHhc-CCCceeeEeccc--CCceE
Q 003384 462 ATHNFDPSLKIGEGGYGSIYKGLLR---HMQVAIKMLHPHSLQGPSEF--QQEIDILSKI-RHPNLVTLVGAC--PEVWT 533 (824)
Q Consensus 462 ~~~~f~~~~~LG~G~fG~Vykg~~~---~~~VAvK~l~~~~~~~~~~f--~~Ei~iL~~l-~HpnIv~L~g~~--~~~~~ 533 (824)
.+.+|..+..||.|.|+.||+...+ +..+++|.+.........++ ..|+-+...+ -|.+++..+..+ .+..|
T Consensus 263 ~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ 342 (524)
T KOG0601|consen 263 KLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGY 342 (524)
T ss_pred ecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCcccccccc
Confidence 3557888999999999999987654 46788887765433322222 3466666665 488888877766 34677
Q ss_pred EEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCC-Ccceeeccccccc
Q 003384 534 LVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDAN-FVSKLSDFGISRF 612 (824)
Q Consensus 534 LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~-~~vKL~DFGla~~ 612 (824)
+=-|||.++++...+. ....+....++++..+++.++.++|+ +.++|+|+||+||++..+ +..+++|||+...
T Consensus 343 ip~e~~~~~s~~l~~~---~~~~~d~~~~~~~~~q~~~~l~~i~s---~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~ 416 (524)
T KOG0601|consen 343 IPLEFCEGGSSSLRSV---TSQMLDEDPRLRLTAQILTALNVIHS---KLFVHLDVKPSNILISNDGFFSKLGDFGCWTR 416 (524)
T ss_pred CchhhhcCcchhhhhH---HHHhcCcchhhhhHHHHHhccccccc---hhhhcccccccceeeccchhhhhccccccccc
Confidence 8899999998876652 22346667788999999999999998 899999999999999886 7889999999864
Q ss_pred cccccccCCCccccccCCCCCCcccC--ChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCCchHHHHHHhhhcccccc
Q 003384 613 LSQNEISSNNTTLCCRTDPKGTFAYM--DPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLL 690 (824)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~GT~~Y~--APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~l 690 (824)
+.-.. ....++-++. +|.......+..+.|++|||.-+.+.++|.+.-..... ...+.
T Consensus 417 ~~~~~-----------~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~---------~~~i~ 476 (524)
T KOG0601|consen 417 LAFSS-----------GVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQ---------SLTIR 476 (524)
T ss_pred cceec-----------ccccccccccccchhhccccccccccccccccccccccccCcccCccccc---------ceeee
Confidence 22111 1112333444 55555566788999999999999999999753321111 01111
Q ss_pred CCCCCCCChhhHHHHHHHHHHHhhhccCCCCCh
Q 003384 691 DPLAGDWPFVQAEQLANLAMRCCEMSRKSRPEL 723 (824)
Q Consensus 691 d~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~ 723 (824)
.......+..- ..+..+...+...++..||.+
T Consensus 477 ~~~~p~~~~~~-~~~q~~~kv~~~~~~~~~~l~ 508 (524)
T KOG0601|consen 477 SGDTPNLPGLK-LQLQVLLKVMINPDRKRRPSA 508 (524)
T ss_pred cccccCCCchH-HhhhhhhhhhcCCccccchhh
Confidence 11111122222 678888888889999999987
No 449
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=98.96 E-value=5.7e-09 Score=120.09 Aligned_cols=161 Identities=19% Similarity=0.232 Sum_probs=117.7
Q ss_pred CeEEEEEEecCCCCCCchhHHHHHHHHHhcCCCceeeEecccCC--ceEEEEEecCCCChhhhhhccCCCCCCCHHHHHH
Q 003384 487 HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACPE--VWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIR 564 (824)
Q Consensus 487 ~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~~--~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ 564 (824)
+.+|.|...............+-+..|+.++||||++++..+.. ..|||.|-+. .|..+|.. ++......
T Consensus 37 ~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~------l~~~~v~~ 108 (690)
T KOG1243|consen 37 GGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKE------LGKEEVCL 108 (690)
T ss_pred CCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHH------hHHHHHHH
Confidence 56777777765544334557888999999999999999998854 5799999883 56666632 22345556
Q ss_pred HHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccccCCCccccccCCCCCCcccCChhhhc
Q 003384 565 IATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLA 644 (824)
Q Consensus 565 ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 644 (824)
.+.||+.||.|||.- .+++|++|.-+.|+++..|..||++|.++......... .. ...--..|..|+.+.
T Consensus 109 Gl~qIl~AL~FL~~d--~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~--~~------~~~~~~s~~~P~~~~ 178 (690)
T KOG1243|consen 109 GLFQILAALSFLNDD--CNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAP--AK------SLYLIESFDDPEEID 178 (690)
T ss_pred HHHHHHHHHHHHhcc--CCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcc--cc------cchhhhcccChhhcC
Confidence 788999999999863 46999999999999999999999999988644322110 00 001122456666544
Q ss_pred cCCCCcchhHHhHHHHHHHHHhC
Q 003384 645 SGELTPKSDVYSFGIILLRLLTG 667 (824)
Q Consensus 645 ~~~~t~ksDVwSlGvvL~ELltG 667 (824)
... ...|.|-|||++++++.|
T Consensus 179 ~s~--~s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 179 PSE--WSIDSWGLGCLIEELFNG 199 (690)
T ss_pred ccc--cchhhhhHHHHHHHHhCc
Confidence 332 346999999999999999
No 450
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.92 E-value=4.6e-08 Score=106.88 Aligned_cols=254 Identities=21% Similarity=0.295 Sum_probs=165.7
Q ss_pred CccceeeecCceEEEEEEECCeEEEEEEecCCCCCCchhHHHHHHHHHhc-CCCceee--------EecccCC-ceEEEE
Q 003384 467 DPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKI-RHPNLVT--------LVGACPE-VWTLVY 536 (824)
Q Consensus 467 ~~~~~LG~G~fG~Vykg~~~~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l-~HpnIv~--------L~g~~~~-~~~LV~ 536 (824)
.++..||+||-+.+|.----+. .+.|+++..... .-.+-+..|... .||-+-. |+|.-.. ...+.|
T Consensus 14 ~~gr~LgqGgea~ly~l~e~~d-~VAKIYh~Pppa---~~aqk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGflm 89 (637)
T COG4248 14 PPGRPLGQGGEADLYTLGEVRD-QVAKIYHAPPPA---AQAQKVAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGFLM 89 (637)
T ss_pred CCCccccCCccceeeecchhhc-hhheeecCCCch---HHHHHHHHhccCCCCcchhhhhcccHHHhhCCCccceeEEec
Confidence 4567799999999995322222 344777654322 112233334333 4554332 2333222 255677
Q ss_pred EecCCC-Chhhhhh---ccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccc
Q 003384 537 EYLPNG-SLEDRLS---CKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRF 612 (824)
Q Consensus 537 Ey~~gg-sL~~~L~---~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~ 612 (824)
..+.|. ....++. .+...+...|.-.++.+..++.+.+-||. .|.+-||+.++|+|+..++.+.|.|-..-..
T Consensus 90 P~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~---~Gh~vGDVn~~~~lVsd~~~V~LVdsDsfqi 166 (637)
T COG4248 90 PKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHE---HGHVVGDVNQNSFLVSDDSKVVLVDSDSFQI 166 (637)
T ss_pred ccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHh---cCCcccccCccceeeecCceEEEEcccceee
Confidence 777664 2333332 23445678999999999999999999999 8999999999999999999999987542211
Q ss_pred cccccccCCCccccccCCCCCCcccCChhhhc-----cCCCCcchhHHhHHHHHHHHHhC-CCCCCCc-------hHHHH
Q 003384 613 LSQNEISSNNTTLCCRTDPKGTFAYMDPEFLA-----SGELTPKSDVYSFGIILLRLLTG-RPALGIT-------KEVQY 679 (824)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~-----~~~~t~ksDVwSlGvvL~ELltG-~~Pf~~~-------~~~~~ 679 (824)
- .+... ....+|...|.+||... +..-+...|.|.|||++++++.| +.||.+. +..+.
T Consensus 167 ~------~ng~~---~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~ 237 (637)
T COG4248 167 N------ANGTL---HLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLET 237 (637)
T ss_pred c------cCCce---EecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchh
Confidence 1 11111 13467999999999764 33456789999999999999986 9999643 22233
Q ss_pred HHhhhcccccc------CCCCCCCChh-hHHHHHHHHHHHhhhc--cCCCCChHHHHHHHHHHHHhh
Q 003384 680 ALDTGKLKNLL------DPLAGDWPFV-QAEQLANLAMRCCEMS--RKSRPELGKDVWRVLEPMRAS 737 (824)
Q Consensus 680 ~~~~~~~~~~l------d~~~~~~p~~-~~~~l~~Li~~Cl~~~--P~~RPt~~~~v~~~Le~l~~~ 737 (824)
.+..|.+...- .+....||.. .+..+..|..+|+... +.-||+. +..+..|..+++.
T Consensus 238 ~Ia~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a-~aW~aAl~al~~~ 303 (637)
T COG4248 238 DIAHGRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTA-KAWVAALDALRQQ 303 (637)
T ss_pred hhhcceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCH-HHHHHHHHHHHHh
Confidence 34444433222 2334455544 3568899999999863 5689998 7787888777664
No 451
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.76 E-value=1.8e-07 Score=104.76 Aligned_cols=164 Identities=23% Similarity=0.303 Sum_probs=128.1
Q ss_pred eEEEEEEEC--CeEEEEEEecCCCCCCchhHHHHHHHHHhcCCCceeeEecccC------CceEEEEEecCC-CChhhhh
Q 003384 478 GSIYKGLLR--HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVTLVGACP------EVWTLVYEYLPN-GSLEDRL 548 (824)
Q Consensus 478 G~Vykg~~~--~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIv~L~g~~~------~~~~LV~Ey~~g-gsL~~~L 548 (824)
.+.||+... |..|++|+++............-+++++++.|+|||++..+|. ...++||+|.|+ ++|.++.
T Consensus 290 ~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~~ 369 (655)
T KOG3741|consen 290 ITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDLY 369 (655)
T ss_pred ceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHHH
Confidence 567888654 7889999997766666656667789999999999999987763 247899999886 4788766
Q ss_pred hccC------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccc
Q 003384 549 SCKD------------NSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQN 616 (824)
Q Consensus 549 ~~~~------------~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~ 616 (824)
+... .....++..++.++.|+..||.++|+ .|+..+-|.|.+||++.+..++|+..|+..++..+
T Consensus 370 F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHs---sGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~d 446 (655)
T KOG3741|consen 370 FANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHS---SGLACKTLDLKKILVTGKMRIRISGCGIMDVLQED 446 (655)
T ss_pred ccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHh---cCceeecccHhHeEeeCcceEEEecccceeeecCC
Confidence 4321 23356778999999999999999999 78999999999999999999999999987765443
Q ss_pred cccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCC
Q 003384 617 EISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRP 669 (824)
Q Consensus 617 ~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~ 669 (824)
.. +-+.. -.+-|.=-||.+++.|.||..
T Consensus 447 ~~----------------------~~le~---~Qq~D~~~lG~ll~aLAt~~~ 474 (655)
T KOG3741|consen 447 PT----------------------EPLES---QQQNDLRDLGLLLLALATGTE 474 (655)
T ss_pred CC----------------------cchhH---HhhhhHHHHHHHHHHHhhccc
Confidence 20 00111 125688899999999999964
No 452
>KOG4642 consensus Chaperone-dependent E3 ubiquitin protein ligase (contains TPR repeats) [Posttranslational modification, protein turnover, chaperones]
Probab=98.72 E-value=7.1e-09 Score=105.39 Aligned_cols=73 Identities=32% Similarity=0.587 Sum_probs=69.8
Q ss_pred CCCCCCCcccchhhhccCCccccCCccchhhhhhhhhcCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhC
Q 003384 752 CEPPPYFTCPIFQEVMQDPHVAADGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPNLALRSAIQEWLQQH 824 (824)
Q Consensus 752 ~~~P~~f~cPi~~evm~dPvi~~~g~tye~~~i~~wl~~~~~t~p~t~~~l~~~~l~pn~~lr~~i~~~~~~~ 824 (824)
.++|+|.+|.|+.++|++|||+++|.||+|..|.+++..-+-.+|.|+.+|...+++||.+|+..|..|+..|
T Consensus 206 rEvpd~lcgkIt~el~~~pvi~psgIty~ra~I~Ehl~rvghfdpvtr~~Lte~q~ipN~alkevIa~fl~~n 278 (284)
T KOG4642|consen 206 REVPDYLCGKITLELMREPVITPSGITYDRADIEEHLQRVGHFDPVTRWPLTEYQLIPNLALKEVIAAFLKEN 278 (284)
T ss_pred ccccchhhhhhhHHhhcCCccCccccchhHHHHHHHHHHhccCCchhcccCCHHhhccchHHHHHHHHHHHhc
Confidence 4789999999999999999999999999999999999998889999999999999999999999999998765
No 453
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.70 E-value=1.4e-07 Score=101.34 Aligned_cols=137 Identities=15% Similarity=0.070 Sum_probs=97.8
Q ss_pred eeeecCceEEEEEEECCeEEEEEEecCCCCC-----------CchhHHHHHHHHHhcCCCce--eeEeccc-------CC
Q 003384 471 KIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQ-----------GPSEFQQEIDILSKIRHPNL--VTLVGAC-------PE 530 (824)
Q Consensus 471 ~LG~G~fG~Vykg~~~~~~VAvK~l~~~~~~-----------~~~~f~~Ei~iL~~l~HpnI--v~L~g~~-------~~ 530 (824)
.+-......|+++.+.|..|.||........ ....+.+|...+.+|..-+| ..++++. ..
T Consensus 29 ~v~~~~~rrvvr~~~~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~ 108 (268)
T PRK15123 29 VFRELEGRRTLRFELAGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATR 108 (268)
T ss_pred EEecCCCceEEEEEECCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccc
Confidence 3444444557788888889999977543311 11147899999988843222 2333332 12
Q ss_pred ceEEEEEecCCC-ChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecC-------CCcc
Q 003384 531 VWTLVYEYLPNG-SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDA-------NFVS 602 (824)
Q Consensus 531 ~~~LV~Ey~~gg-sL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~-------~~~v 602 (824)
..+||+|++++. +|.+++.... ..+.+...+..++.+++..+.-||. .||+|+|+++.|||++. ++.+
T Consensus 109 ~s~LVte~l~~~~sL~~~~~~~~-~~~~~~~~~~~ll~~la~~i~~LH~---~Gi~HgDL~~~NiLl~~~~~~~~~~~~~ 184 (268)
T PRK15123 109 TSFIITEDLAPTISLEDYCADWA-TNPPDPRLKRMLIKRVATMVRDMHA---AGINHRDCYICHFLLHLPFPGREEDLKL 184 (268)
T ss_pred eeEEEEeeCCCCccHHHHHHhhc-ccCCCHHHHHHHHHHHHHHHHHHHH---CcCccCCCChhhEEEeccccCCCCCceE
Confidence 367999999886 8998874221 2344556777899999999999999 89999999999999975 4688
Q ss_pred eeecccccc
Q 003384 603 KLSDFGISR 611 (824)
Q Consensus 603 KL~DFGla~ 611 (824)
.|+||+.+.
T Consensus 185 ~LIDl~r~~ 193 (268)
T PRK15123 185 SVIDLHRAQ 193 (268)
T ss_pred EEEECCccc
Confidence 999999875
No 454
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.67 E-value=8.3e-08 Score=97.48 Aligned_cols=124 Identities=23% Similarity=0.253 Sum_probs=78.6
Q ss_pred EEEEEEEC-CeEEEEEEecCCCCC---------------------Cc-----hhHHHHHHHHHhcCCC--ceeeEecccC
Q 003384 479 SIYKGLLR-HMQVAIKMLHPHSLQ---------------------GP-----SEFQQEIDILSKIRHP--NLVTLVGACP 529 (824)
Q Consensus 479 ~Vykg~~~-~~~VAvK~l~~~~~~---------------------~~-----~~f~~Ei~iL~~l~Hp--nIv~L~g~~~ 529 (824)
.||.|... +..+|||+.+..... .. ....+|.+.|.++..- ++.+++++.
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 48999874 688999997642110 00 1256899999999755 456666542
Q ss_pred CceEEEEEecC--CCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHH-HhhcCCCceEeccccCCcEEecCCCcceeec
Q 003384 530 EVWTLVYEYLP--NGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIF-LHSCKPHSIVHGDLKPANILLDANFVSKLSD 606 (824)
Q Consensus 530 ~~~~LV~Ey~~--ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~-LH~~~~~giiHrDLKp~NILld~~~~vKL~D 606 (824)
..+|||||++ |..+..+.... ++......++.+++..+.. +|. .|||||||.+.|||++.+ .+.|+|
T Consensus 80 -~~~ivME~I~~~G~~~~~l~~~~-----~~~~~~~~~~~~il~~~~~~~~~---~givHGDLs~~NIlv~~~-~~~iID 149 (188)
T PF01163_consen 80 -RNVIVMEYIGEDGVPLPRLKDVD-----LSPEEPKELLEEILEEIIKMLHK---AGIVHGDLSEYNILVDDG-KVYIID 149 (188)
T ss_dssp -TTEEEEE--EETTEEGGCHHHCG-----GGGSTHHHHHHHHHHHHHHHHHC---TTEEESS-STTSEEEETT-CEEE--
T ss_pred -CCEEEEEecCCCccchhhHHhcc-----ccchhHHHHHHHHHHHHHHHHHh---cCceecCCChhhEEeecc-eEEEEe
Confidence 4579999998 65554433211 1123455677777775555 567 799999999999999988 899999
Q ss_pred ccccccc
Q 003384 607 FGISRFL 613 (824)
Q Consensus 607 FGla~~~ 613 (824)
||.+...
T Consensus 150 f~qav~~ 156 (188)
T PF01163_consen 150 FGQAVDS 156 (188)
T ss_dssp GTTEEET
T ss_pred cCcceec
Confidence 9987643
No 455
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.44 E-value=6.2e-08 Score=112.14 Aligned_cols=151 Identities=21% Similarity=0.287 Sum_probs=102.2
Q ss_pred HHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeeccccccccccccccCCC-ccccccCCCCCCcccCChhhhccC
Q 003384 568 ELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNN-TTLCCRTDPKGTFAYMDPEFLASG 646 (824)
Q Consensus 568 qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~~~~-~~~~~~~~~~GT~~Y~APE~l~~~ 646 (824)
+++.||.|+|.. .++||++|.|++|.++.++.+||++|+++............ ......--..-...|.|||++.+.
T Consensus 107 ~v~dgl~flh~s--Ak~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~~ 184 (700)
T KOG2137|consen 107 NVADGLAFLHRS--AKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLGT 184 (700)
T ss_pred cccchhhhhccC--cceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhccc
Confidence 455899999985 46999999999999999999999999998654331111100 000000111346689999999998
Q ss_pred CCCcchhHHhHHHHHHHHH-hCCCCCCCchHHHHHHhhhccccccCCCCCCCChhhHHHHHHHHHHHhhhccCCCCCh
Q 003384 647 ELTPKSDVYSFGIILLRLL-TGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPEL 723 (824)
Q Consensus 647 ~~t~ksDVwSlGvvL~ELl-tG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~ 723 (824)
..++++|+||+||++|.+. .|++-+...+........+. ..+.....+....+.++.+-+.+.+..+..-||++
T Consensus 185 ~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~~---~~~~~~~~~s~~~p~el~~~l~k~l~~~~~~rp~~ 259 (700)
T KOG2137|consen 185 TNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSRN---LLNAGAFGYSNNLPSELRESLKKLLNGDSAVRPTL 259 (700)
T ss_pred cccccccceeeeeEEEEEecCCcchhhccCCcchhhhhhc---ccccccccccccCcHHHHHHHHHHhcCCcccCcch
Confidence 8899999999999999999 56655543322211111111 11111112234556788999999999999999976
No 456
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.44 E-value=8.9e-07 Score=91.47 Aligned_cols=104 Identities=30% Similarity=0.342 Sum_probs=79.7
Q ss_pred chhHHHHHHHHHhcCCCc--eeeEecccC------CceEEEEEecCCC-ChhhhhhccCCCCCCCHHHHHHHHHHHHHHH
Q 003384 503 PSEFQQEIDILSKIRHPN--LVTLVGACP------EVWTLVYEYLPNG-SLEDRLSCKDNSPPLSWQTRIRIATELCSVL 573 (824)
Q Consensus 503 ~~~f~~Ei~iL~~l~Hpn--Iv~L~g~~~------~~~~LV~Ey~~gg-sL~~~L~~~~~~~~l~~~~~~~ia~qia~aL 573 (824)
.....+|...+..|..-+ +.+.+++.. ...+||+|++++. +|.+++.... .++......++.+++..+
T Consensus 55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~---~~~~~~~~~ll~~l~~~i 131 (206)
T PF06293_consen 55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWE---QLDPSQRRELLRALARLI 131 (206)
T ss_pred chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhc---ccchhhHHHHHHHHHHHH
Confidence 346888999888875322 233344332 2357999999985 8999885322 155567788999999999
Q ss_pred HHHhhcCCCceEeccccCCcEEecCCC---cceeeccccccc
Q 003384 574 IFLHSCKPHSIVHGDLKPANILLDANF---VSKLSDFGISRF 612 (824)
Q Consensus 574 ~~LH~~~~~giiHrDLKp~NILld~~~---~vKL~DFGla~~ 612 (824)
.-||. .||+|+|+++.|||++.++ .+.|+||+-++.
T Consensus 132 ~~lH~---~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~ 170 (206)
T PF06293_consen 132 AKLHD---AGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF 170 (206)
T ss_pred HHHHH---CcCCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence 99999 8999999999999999877 899999998764
No 457
>PRK09902 hypothetical protein; Provisional
Probab=98.40 E-value=3.3e-06 Score=86.76 Aligned_cols=135 Identities=16% Similarity=0.133 Sum_probs=102.0
Q ss_pred eeecCceEEEEEEECCeEEEEEEecCCC------CCCchhHHHHHHHHHhcCCC--ceeeEecccC-------CceEEEE
Q 003384 472 IGEGGYGSIYKGLLRHMQVAIKMLHPHS------LQGPSEFQQEIDILSKIRHP--NLVTLVGACP-------EVWTLVY 536 (824)
Q Consensus 472 LG~G~fG~Vykg~~~~~~VAvK~l~~~~------~~~~~~f~~Ei~iL~~l~Hp--nIv~L~g~~~-------~~~~LV~ 536 (824)
-|+||.+-|++-.+.+..+-+|.-...- ......|.+|+..|.+|..- .+.+.+ ++. -..+||+
T Consensus 26 ~~rgG~SgV~r~~~~g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LVT 104 (216)
T PRK09902 26 YRRNGMSGVQCVERNGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLVT 104 (216)
T ss_pred cCCCCcceEEEEEeCCcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEEE
Confidence 4779999999988888888888754221 12346799999999998532 244444 221 1357999
Q ss_pred EecCC-CChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCc--ceeecccccc
Q 003384 537 EYLPN-GSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFV--SKLSDFGISR 611 (824)
Q Consensus 537 Ey~~g-gsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~--vKL~DFGla~ 611 (824)
|-+.| -+|.+++... ...+.+...+..+..+++..|.-||. .|+.|+|+-+.|||++.++. ++++||.-++
T Consensus 105 e~L~g~~~L~~~l~~~-~~~~~~~~~k~~il~~va~~ia~LH~---~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r 178 (216)
T PRK09902 105 EDMAGFISIADWYAQH-AVSPYSDEVRQAMLKAVALAFKKMHS---VNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSR 178 (216)
T ss_pred EeCCCCccHHHHHhcC-CcCCcchHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHhheeecCCCCeeEEEEEhhccc
Confidence 98865 4888887432 22356777788999999999999999 89999999999999986666 9999999665
No 458
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.35 E-value=1.9e-06 Score=90.52 Aligned_cols=133 Identities=20% Similarity=0.189 Sum_probs=90.9
Q ss_pred CCccceeeecCceEEEEEEEC-CeEEEEEEecCCCC--C--------------------CchhHHHHHHHHHhcCCC--c
Q 003384 466 FDPSLKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSL--Q--------------------GPSEFQQEIDILSKIRHP--N 520 (824)
Q Consensus 466 f~~~~~LG~G~fG~Vykg~~~-~~~VAvK~l~~~~~--~--------------------~~~~f~~Ei~iL~~l~Hp--n 520 (824)
..++..||-|--+.||.|... +.++|||.-+.... . +.....+|.++|.+|... .
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~ 172 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK 172 (304)
T ss_pred HhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence 456678999999999999986 78999997432110 0 012256899999988654 4
Q ss_pred eeeEecccCCceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCC
Q 003384 521 LVTLVGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANF 600 (824)
Q Consensus 521 Iv~L~g~~~~~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~ 600 (824)
|.+.++. +...+||||++|-.|...- ++....-.|+..|++-+.-+-. .||||+|+++-|||++++|
T Consensus 173 VP~P~~~--nRHaVvMe~ieG~eL~~~r--------~~~en~~~il~~il~~~~~~~~---~GiVHGDlSefNIlV~~dg 239 (304)
T COG0478 173 VPKPIAW--NRHAVVMEYIEGVELYRLR--------LDVENPDEILDKILEEVRKAYR---RGIVHGDLSEFNILVTEDG 239 (304)
T ss_pred CCCcccc--ccceeeeehcccceeeccc--------CcccCHHHHHHHHHHHHHHHHH---cCccccCCchheEEEecCC
Confidence 4444443 4567999999987665432 1112222333334333333334 6899999999999999999
Q ss_pred cceeecccccc
Q 003384 601 VSKLSDFGISR 611 (824)
Q Consensus 601 ~vKL~DFGla~ 611 (824)
.+.++||--+.
T Consensus 240 ~~~vIDwPQ~v 250 (304)
T COG0478 240 DIVVIDWPQAV 250 (304)
T ss_pred CEEEEeCcccc
Confidence 99999998654
No 459
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.21 E-value=1e-05 Score=84.83 Aligned_cols=131 Identities=18% Similarity=0.249 Sum_probs=81.3
Q ss_pred cceeeecCceEEEEEEECCeEEEEEEecCCCCCCchhHHHHHHHHHhcCCCce--eeEeccc--CCceEEEEEecCCCC-
Q 003384 469 SLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNL--VTLVGAC--PEVWTLVYEYLPNGS- 543 (824)
Q Consensus 469 ~~~LG~G~fG~Vykg~~~~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnI--v~L~g~~--~~~~~LV~Ey~~ggs- 543 (824)
...||+|..+.||+. .+..+++|...... ......+|.++++.+..-++ .+.++++ .+...+|||+++|.+
T Consensus 6 ~~~i~~G~t~~~y~~--~~~~~VlR~~~~~~--~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~~ 81 (226)
T TIGR02172 6 WTQTGEGGNGESYTH--KTGKWMLKLYNPGF--DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKRS 81 (226)
T ss_pred heeecCCCCcceeEe--cCCCEEEEeCCCCC--CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCccc
Confidence 357999999999984 35567889876532 34567899999998863333 4455554 345678999999863
Q ss_pred hhhhhhccCCCCCCCHHHHHHHHHHHHHH---------------------------------------HHHHhhc-CCCc
Q 003384 544 LEDRLSCKDNSPPLSWQTRIRIATELCSV---------------------------------------LIFLHSC-KPHS 583 (824)
Q Consensus 544 L~~~L~~~~~~~~l~~~~~~~ia~qia~a---------------------------------------L~~LH~~-~~~g 583 (824)
+...+. .+......++..++.. ..+|... .+..
T Consensus 82 ~~~~~~-------~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~ 154 (226)
T TIGR02172 82 FSRIIS-------DNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTST 154 (226)
T ss_pred hhhhhc-------CCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCc
Confidence 221110 0001111111112221 2222211 1235
Q ss_pred eEeccccCCcEEecCCCcceeecccccc
Q 003384 584 IVHGDLKPANILLDANFVSKLSDFGISR 611 (824)
Q Consensus 584 iiHrDLKp~NILld~~~~vKL~DFGla~ 611 (824)
++|+|+.|.||++++++ +.|+||+.+.
T Consensus 155 ~~HgD~~~~Nii~~~~~-~~iIDwe~a~ 181 (226)
T TIGR02172 155 CLHGDFQIGNLITSGKG-TYWIDLGDFG 181 (226)
T ss_pred eEecCCCCCcEEEcCCC-cEEEechhcC
Confidence 78999999999999888 9999999764
No 460
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=98.19 E-value=1.1e-05 Score=83.39 Aligned_cols=140 Identities=21% Similarity=0.302 Sum_probs=84.7
Q ss_pred ceeeecCceEEEEEEECCeEEEEEEecCCCCCCchhHHHHHHHHHhcCCC--ceeeEeccc-----CCceEEEEEecCCC
Q 003384 470 LKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHP--NLVTLVGAC-----PEVWTLVYEYLPNG 542 (824)
Q Consensus 470 ~~LG~G~fG~Vykg~~~~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~Hp--nIv~L~g~~-----~~~~~LV~Ey~~gg 542 (824)
+.|+.|..+.||+....+..+++|..... .....+.+|..++..+... .+.+++..+ ....+++|+|++|.
T Consensus 3 ~~l~~G~~n~~~~v~~~~~~~vlK~~~~~--~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~g~ 80 (239)
T PF01636_consen 3 RPLSGGFSNRVYRVTTDDGRYVLKFYRPP--DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIPGR 80 (239)
T ss_dssp EEEEESSSSEEEEEEETTSEEEEEEESSH--HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEESSE
T ss_pred ccCCCCCeeeEEEEEECCcEEEEEEeCCC--CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEeccc
Confidence 56999999999999988889999997654 2345788999999888533 345566533 22368999999998
Q ss_pred Chhh----------------hhh---cc-CCCCCCCHHHH---------HHH------------HHHHHH-HHHHHhh--
Q 003384 543 SLED----------------RLS---CK-DNSPPLSWQTR---------IRI------------ATELCS-VLIFLHS-- 578 (824)
Q Consensus 543 sL~~----------------~L~---~~-~~~~~l~~~~~---------~~i------------a~qia~-aL~~LH~-- 578 (824)
++.. .+. .. ....++..... ... ...+.. .+..++.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (239)
T PF01636_consen 81 PLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQELEALL 160 (239)
T ss_dssp EHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHHHHHHHHHhhh
Confidence 8777 111 11 11111111110 000 111222 3334443
Q ss_pred --cCCCceEeccccCCcEEec-CCCcceeecccccc
Q 003384 579 --CKPHSIVHGDLKPANILLD-ANFVSKLSDFGISR 611 (824)
Q Consensus 579 --~~~~giiHrDLKp~NILld-~~~~vKL~DFGla~ 611 (824)
..+..++|+|+.|.|||++ .++.+-|+||+.+.
T Consensus 161 ~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~ 196 (239)
T PF01636_consen 161 PKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAG 196 (239)
T ss_dssp HCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-E
T ss_pred ccCCCcEEEEeccccccceeeeccceeEEEecccce
Confidence 1346799999999999999 66666899999764
No 461
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.14 E-value=8.9e-06 Score=83.96 Aligned_cols=135 Identities=19% Similarity=0.211 Sum_probs=91.5
Q ss_pred hcCCCCccceeeecCceEEEEEEECCeEEEEEEecCCCCCCchh---------HHHHHHHHHhcCCCc---eeeEeccc-
Q 003384 462 ATHNFDPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSE---------FQQEIDILSKIRHPN---LVTLVGAC- 528 (824)
Q Consensus 462 ~~~~f~~~~~LG~G~fG~Vykg~~~~~~VAvK~l~~~~~~~~~~---------f~~Ei~iL~~l~Hpn---Iv~L~g~~- 528 (824)
...+|...+++-......|.+-...+..+.+|............ ..+.+..+..+...+ ...++.+.
T Consensus 29 ~~~~~~~~kv~k~~~r~~ValIei~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~~e 108 (229)
T PF06176_consen 29 LDNNYKIIKVFKNTKRNYVALIEIDGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLAAE 108 (229)
T ss_pred HhCCceEEEeecCCCccEEEEEEECCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceeeee
Confidence 35577777778877778888888889999999887644322222 223444444443222 22222211
Q ss_pred ------CCceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcc
Q 003384 529 ------PEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVS 602 (824)
Q Consensus 529 ------~~~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~v 602 (824)
....+|||||++|..|.+... ++. .++..+..++.-||. .|++|+|..|.|++++.++ +
T Consensus 109 kk~~~~~~~~~ll~EYIeG~~l~d~~~-------i~e----~~~~ki~~~ikqlH~---~G~~HGD~hpgNFlv~~~~-i 173 (229)
T PF06176_consen 109 KKIFRYTSSYVLLMEYIEGVELNDIED-------IDE----DLAEKIVEAIKQLHK---HGFYHGDPHPGNFLVSNNG-I 173 (229)
T ss_pred eeeccceeEEEEEEEEecCeecccchh-------cCH----HHHHHHHHHHHHHHH---cCCccCCCCcCcEEEECCc-E
Confidence 234568999999988876541 221 345667788999999 8999999999999999665 8
Q ss_pred eeecccccc
Q 003384 603 KLSDFGISR 611 (824)
Q Consensus 603 KL~DFGla~ 611 (824)
+++||+..+
T Consensus 174 ~iID~~~k~ 182 (229)
T PF06176_consen 174 RIIDTQGKR 182 (229)
T ss_pred EEEECcccc
Confidence 999998654
No 462
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.04 E-value=1.5e-05 Score=92.73 Aligned_cols=139 Identities=21% Similarity=0.302 Sum_probs=90.2
Q ss_pred ceeeecCceEEEEEEEC-CeEEEEEEecCCCCCCc------------------------------h----------hHHH
Q 003384 470 LKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGP------------------------------S----------EFQQ 508 (824)
Q Consensus 470 ~~LG~G~fG~Vykg~~~-~~~VAvK~l~~~~~~~~------------------------------~----------~f~~ 508 (824)
..|+.++-|.||+|++. |+.||||+.++.-.... + .+.+
T Consensus 131 ~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~ 210 (517)
T COG0661 131 EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRR 210 (517)
T ss_pred CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHH
Confidence 46999999999999998 79999999876432110 0 1234
Q ss_pred HHHHHHhcC-----CCce--eeEecccCCceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCC
Q 003384 509 EIDILSKIR-----HPNL--VTLVGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKP 581 (824)
Q Consensus 509 Ei~iL~~l~-----HpnI--v~L~g~~~~~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~ 581 (824)
|..-+.+++ .|+| .++|--+.....|+|||++|..+.+...... ..++. ..++..++++ |+-+.-.
T Consensus 211 EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~--~g~d~---k~ia~~~~~~--f~~q~~~ 283 (517)
T COG0661 211 EAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKS--AGIDR---KELAELLVRA--FLRQLLR 283 (517)
T ss_pred HHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHh--cCCCH---HHHHHHHHHH--HHHHHHh
Confidence 444444442 3332 2233223345679999999999988753222 22332 2333333332 1111111
Q ss_pred CceEeccccCCcEEecCCCcceeecccccccccc
Q 003384 582 HSIVHGDLKPANILLDANFVSKLSDFGISRFLSQ 615 (824)
Q Consensus 582 ~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~ 615 (824)
.|++|.|..|.||+++.+|.+-+.|||+...+..
T Consensus 284 dgffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~ 317 (517)
T COG0661 284 DGFFHADPHPGNILVRSDGRIVLLDFGIVGRLDP 317 (517)
T ss_pred cCccccCCCccceEEecCCcEEEEcCcceecCCH
Confidence 5899999999999999999999999999876654
No 463
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=98.04 E-value=1.7e-05 Score=80.86 Aligned_cols=106 Identities=23% Similarity=0.228 Sum_probs=84.8
Q ss_pred HHHHHHHHhcCC-CceeeEecccCCceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceE
Q 003384 507 QQEIDILSKIRH-PNLVTLVGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIV 585 (824)
Q Consensus 507 ~~Ei~iL~~l~H-pnIv~L~g~~~~~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~gii 585 (824)
..|.-+|+.+.+ +++.+++|+|.. .+|.||+..+++............-+|..|.+||.++++.+.+|++.....+.
T Consensus 7 ~~E~lll~~l~~~~~~pk~lG~CG~--~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~~~~ 84 (188)
T PF12260_consen 7 NNEPLLLQLLQGSEPFPKLLGSCGR--FYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPLGFFY 84 (188)
T ss_pred ccHHHHHHHcCCCCCCCCeeeECCC--EEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCCCcEE
Confidence 458888999976 699999999965 56999998776643210001223468999999999999999999987666688
Q ss_pred eccccCCcEEecCCCcceeeccccccccc
Q 003384 586 HGDLKPANILLDANFVSKLSDFGISRFLS 614 (824)
Q Consensus 586 HrDLKp~NILld~~~~vKL~DFGla~~~~ 614 (824)
-.|++|+|+-++.+|.+|++|...+....
T Consensus 85 lcDv~~~nfgv~~~~~lk~iDld~v~~~~ 113 (188)
T PF12260_consen 85 LCDVSPDNFGVNDDGRLKLIDLDDVFVED 113 (188)
T ss_pred EeecchHHeEEeCCCcEEEEechhcchhH
Confidence 89999999999999999999999776543
No 464
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=98.00 E-value=1.2e-06 Score=100.59 Aligned_cols=191 Identities=18% Similarity=0.149 Sum_probs=132.8
Q ss_pred HhhhcCCCCccceeeecCceEEEEEEECCe-EEEEEEecCCCCCCchhHHHHHHHHHhcCCCc-eeeEecccC--CceEE
Q 003384 459 IEGATHNFDPSLKIGEGGYGSIYKGLLRHM-QVAIKMLHPHSLQGPSEFQQEIDILSKIRHPN-LVTLVGACP--EVWTL 534 (824)
Q Consensus 459 i~~~~~~f~~~~~LG~G~fG~Vykg~~~~~-~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~Hpn-Iv~L~g~~~--~~~~L 534 (824)
++..+.-+...+.+++|+++++||.+.... ....+.+.. .....-++++|.+++||| .+..++.+. +...+
T Consensus 237 lkDk~kws~~fh~fvK~altknpKkRptaeklL~h~fvs~-----~l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i 311 (829)
T KOG0576|consen 237 LKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQ-----TLSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWI 311 (829)
T ss_pred ccCCccchHHHHHHHHHHhcCCCccCCChhhheeceeecc-----chhhHHHHHHHHHccCCCCcccccccCCcccccch
Confidence 334455556667799999999999876532 222444322 245677999999999999 666666663 45678
Q ss_pred EEEecCCC-ChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcceeecccccccc
Q 003384 535 VYEYLPNG-SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVSKLSDFGISRFL 613 (824)
Q Consensus 535 V~Ey~~gg-sL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~vKL~DFGla~~~ 613 (824)
+++|+.+| +-..... .....+...+...+...-.++|++||+ -.-+|+| |||..+ +..|.+||+....+
T Consensus 312 ~~~i~s~~rs~~~~~~--~se~~~~~~~~~~~~r~et~~l~~l~~---~~~~~~d----~~l~s~-~~~~~~~~~v~~~L 381 (829)
T KOG0576|consen 312 PMRICSTGRSSALEMT--VSEIALEQYQFAYPLRKETRPLAELHS---SYKVHRD----NILGSE-EEVKLLDFAVPPQL 381 (829)
T ss_pred hhhhhcCCccccccCC--hhhHhhhhhhhhhhhhhhccccccccc---ccccCcc----cccccc-cccccccccCCccc
Confidence 99999877 2222110 111112223444556667788999998 3348998 887766 57899999988766
Q ss_pred ccccccCCCccccccCCCCCCcccCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCCCC
Q 003384 614 SQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGI 673 (824)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf~~ 673 (824)
.... ......+|+.++|||+.....+....|+|++|+--.+|.-|-+|-..
T Consensus 382 ~~~~---------~~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr~~ 432 (829)
T KOG0576|consen 382 TRTM---------KPRTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPRSS 432 (829)
T ss_pred Cccc---------ccccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCCCC
Confidence 5442 12445699999999999999999999999999988888888877643
No 465
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=97.98 E-value=4.3e-05 Score=80.73 Aligned_cols=137 Identities=16% Similarity=0.169 Sum_probs=82.9
Q ss_pred eeecCc-eEEEEEEECCeEEEEEEecCCCCCCchhHHHHHHHHHhcC-CCceeeEecccCC--ceEEEEEecCCCChhhh
Q 003384 472 IGEGGY-GSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIR-HPNLVTLVGACPE--VWTLVYEYLPNGSLEDR 547 (824)
Q Consensus 472 LG~G~f-G~Vykg~~~~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~-HpnIv~L~g~~~~--~~~LV~Ey~~ggsL~~~ 547 (824)
|-.|.. ..||+....+..+.||+..... ...+.+|+.++..+. +--+.++++++.. ..++||||++|.+|...
T Consensus 6 ~~~g~~~~~v~~~~~~~~~~~vk~~~~~~---~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~~ 82 (244)
T cd05150 6 VTEGQSGATVYRLDGKNPGLYLKIAPSGP---TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPAAAL 82 (244)
T ss_pred cCCCCCcCeEEEEcCCCCcEEEEecCCCc---ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccHhHh
Confidence 445555 7899987766788889875443 346788999998884 3335566666543 47899999999877643
Q ss_pred h-------------------hccC-CCCCCCH--HHHHHHHH--------------------HHHHHHHHHhh----cCC
Q 003384 548 L-------------------SCKD-NSPPLSW--QTRIRIAT--------------------ELCSVLIFLHS----CKP 581 (824)
Q Consensus 548 L-------------------~~~~-~~~~l~~--~~~~~ia~--------------------qia~aL~~LH~----~~~ 581 (824)
. +... ...++.. ........ .+...+..|-. ..+
T Consensus 83 ~~~~~~~~~~~~l~~~l~~lH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 162 (244)
T cd05150 83 WEELEPERLVDALAEALRRLHALPVADCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSAEELYAELEATRPAEED 162 (244)
T ss_pred hcccCHHHHHHHHHHHHHHHhcCCcccCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHHHHHHhhCCCcCc
Confidence 2 1110 0111110 01110000 01111222211 122
Q ss_pred CceEeccccCCcEEecCCCcceeecccccc
Q 003384 582 HSIVHGDLKPANILLDANFVSKLSDFGISR 611 (824)
Q Consensus 582 ~giiHrDLKp~NILld~~~~vKL~DFGla~ 611 (824)
..++|+|+.|.|||+++++.+.|+||+.+.
T Consensus 163 ~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~ 192 (244)
T cd05150 163 LVVTHGDACLPNIIVDPGKFSGFIDLGRLG 192 (244)
T ss_pred eEEECCCCCCccEEEeCCcEEEEEEccccc
Confidence 458999999999999998888999999654
No 466
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=97.89 E-value=4.6e-05 Score=75.64 Aligned_cols=128 Identities=18% Similarity=0.188 Sum_probs=89.3
Q ss_pred CccceeeecCceEEEEEEECCeEEEEEEecCCCCCCchhHHHHHHHHHhcCCCceee-EecccCCceEEEEEecCCCChh
Q 003384 467 DPSLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNLVT-LVGACPEVWTLVYEYLPNGSLE 545 (824)
Q Consensus 467 ~~~~~LG~G~fG~Vykg~~~~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnIv~-L~g~~~~~~~LV~Ey~~ggsL~ 545 (824)
...+.||+|.+|.||+|.+++..+|+|+-..++ ....+..|+++|..+.--++.+ +|.+..+ .+.|||+.|-+|.
T Consensus 25 ~v~~~L~KG~~s~Vyl~~~~~~~~a~Kvrr~ds--~r~~l~kEakiLeil~g~~~~p~vy~yg~~--~i~me~i~G~~L~ 100 (201)
T COG2112 25 RVEKELAKGTTSVVYLGEWRGGEVALKVRRRDS--PRRNLEKEAKILEILAGEGVTPEVYFYGED--FIRMEYIDGRPLG 100 (201)
T ss_pred hhhhhhhcccccEEEEeeccCceEEEEEecCCc--chhhHHHHHHHHHHhhhcCCCceEEEechh--hhhhhhhcCcchh
Confidence 445679999999999999999999999876543 3467999999999987665543 3333322 2459999998887
Q ss_pred hhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEecccc-CCcEEecCCCcceeecccccc
Q 003384 546 DRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLK-PANILLDANFVSKLSDFGISR 611 (824)
Q Consensus 546 ~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLK-p~NILld~~~~vKL~DFGla~ 611 (824)
+.-... +-.+ ...+++.-.-|.. .||-|+.|. |..++|.+++.+.|+||.-|.
T Consensus 101 ~~~~~~------~rk~----l~~vlE~a~~LD~---~GI~H~El~~~~k~vlv~~~~~~iIDFd~At 154 (201)
T COG2112 101 KLEIGG------DRKH----LLRVLEKAYKLDR---LGIEHGELSRPWKNVLVNDRDVYIIDFDSAT 154 (201)
T ss_pred hhhhcc------cHHH----HHHHHHHHHHHHH---hccchhhhcCCceeEEecCCcEEEEEccchh
Confidence 765211 1122 2334455444555 788888886 444444445599999999876
No 467
>PLN02876 acyl-CoA dehydrogenase
Probab=97.88 E-value=0.00011 Score=91.20 Aligned_cols=145 Identities=19% Similarity=0.321 Sum_probs=90.4
Q ss_pred cceeeecCceEEEEEEECC----eEEEEEEecCCCC-CCchhHHHHHHHHHhcC-CCce--eeEecccCC-----ceEEE
Q 003384 469 SLKIGEGGYGSIYKGLLRH----MQVAIKMLHPHSL-QGPSEFQQEIDILSKIR-HPNL--VTLVGACPE-----VWTLV 535 (824)
Q Consensus 469 ~~~LG~G~fG~Vykg~~~~----~~VAvK~l~~~~~-~~~~~f~~Ei~iL~~l~-HpnI--v~L~g~~~~-----~~~LV 535 (824)
...|+.|.++.+|+....+ ..+++|+...... .....+.+|+.+|+.+. |+++ .+++++|.+ ..++|
T Consensus 43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flV 122 (822)
T PLN02876 43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYI 122 (822)
T ss_pred EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEE
Confidence 4568999999999877654 4677787544321 23356889999999995 6665 777887754 46899
Q ss_pred EEecCCCChhhh-----------------------hhccCC--------CCCCCH--HHHHHHH---------------H
Q 003384 536 YEYLPNGSLEDR-----------------------LSCKDN--------SPPLSW--QTRIRIA---------------T 567 (824)
Q Consensus 536 ~Ey~~ggsL~~~-----------------------L~~~~~--------~~~l~~--~~~~~ia---------------~ 567 (824)
|||++|..+.+. |+.... ..+..+ .++..+. -
T Consensus 123 ME~v~G~~~~~~~~~~~~~~~r~~l~~~l~~~La~LH~vd~~~~gl~~~g~~~~~~~~~l~~w~~~~~~~~~~~~~~~~~ 202 (822)
T PLN02876 123 MEYLEGRIFVDPKLPGVAPERRRAIYRATAKVLAALHSADVDAIGLGKYGRRDNYCKRQVERWAKQYLASTGEGKPPRNP 202 (822)
T ss_pred EEecCCcccCCccCCCCCHHHHHHHHHHHHHHHHHHhCCCchhcChhhcCCCCchHHHHHHHHHHHHHHhhcccCCCCCh
Confidence 999998654321 111110 011111 1111111 1
Q ss_pred HHHHHHHHHhhcCC--------CceEeccccCCcEEecCC-C-cceeecccccccc
Q 003384 568 ELCSVLIFLHSCKP--------HSIVHGDLKPANILLDAN-F-VSKLSDFGISRFL 613 (824)
Q Consensus 568 qia~aL~~LH~~~~--------~giiHrDLKp~NILld~~-~-~vKL~DFGla~~~ 613 (824)
.+...+.+|....| ..+||+|+++.|||++.+ + .+-|.||+++..-
T Consensus 203 ~~~~l~~wL~~~~P~~~~~~~~~~LvHGD~~~~Nvl~~~~~~~v~aVLDWE~a~~G 258 (822)
T PLN02876 203 KMLELIDWLRENIPAEDSTGAGTGIVHGDFRIDNLVFHPTEDRVIGILDWELSTLG 258 (822)
T ss_pred hHHHHHHHHHhcCCCccccCCCcceEecCcccccEEEcCCCCeEEEEEeeeccccC
Confidence 13344566654333 249999999999999853 3 3579999998654
No 468
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=97.88 E-value=6.3e-05 Score=79.14 Aligned_cols=71 Identities=11% Similarity=0.165 Sum_probs=45.6
Q ss_pred ceeeecCce-EEEEEEECCeEEEEEEecCCCCCCchhHHHHHHHHHhcCCC---ceeeEecccCC-----ceEEEEEecC
Q 003384 470 LKIGEGGYG-SIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHP---NLVTLVGACPE-----VWTLVYEYLP 540 (824)
Q Consensus 470 ~~LG~G~fG-~Vykg~~~~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~Hp---nIv~L~g~~~~-----~~~LV~Ey~~ 540 (824)
..|+.||.. .||+. +..+++|+.... .....+.+|..+|..+... -+.++++.+.. ..++||++++
T Consensus 3 ~~~~~gG~~n~vy~~---~~~~VlR~~~~~--~~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l~~~i~ 77 (235)
T cd05155 3 EPVDSGGTDNATFRL---GDDMSVRLPSAA--GYAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSVYRWLE 77 (235)
T ss_pred eeccCCCcccceEEc---CCceEEEcCCcc--chHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEEEEeec
Confidence 457877776 48864 345777875432 2345789999999887531 23344444322 3478999999
Q ss_pred CCChh
Q 003384 541 NGSLE 545 (824)
Q Consensus 541 ggsL~ 545 (824)
|.++.
T Consensus 78 G~~l~ 82 (235)
T cd05155 78 GETAT 82 (235)
T ss_pred CCCCC
Confidence 97774
No 469
>KOG2042 consensus Ubiquitin fusion degradation protein-2 [Posttranslational modification, protein turnover, chaperones]
Probab=97.79 E-value=1.4e-05 Score=96.17 Aligned_cols=74 Identities=27% Similarity=0.474 Sum_probs=68.9
Q ss_pred CCCCCCCCCcccchhhhccCCcccc-CCccchhhhhhhhhcCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhC
Q 003384 750 ERCEPPPYFTCPIFQEVMQDPHVAA-DGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPNLALRSAIQEWLQQH 824 (824)
Q Consensus 750 ~~~~~P~~f~cPi~~evm~dPvi~~-~g~tye~~~i~~wl~~~~~t~p~t~~~l~~~~l~pn~~lr~~i~~~~~~~ 824 (824)
...++|++|..|+...+|.|||+.+ +|.+.+|+.|..|+.+ ..|||+.|.+|+..+++||-+||+.|+.|..++
T Consensus 863 ~l~dvpdef~DPlm~Tlm~dPV~LP~Srv~vDRsti~rhlLs-~~tdPFNR~pLt~d~v~pn~eLK~kI~~~~~ek 937 (943)
T KOG2042|consen 863 ELGDVPDEFLDPLMSTLMSDPVVLPSSRVTVDRSTIERHLLS-DCTDPFNREPLTEDMVSPNEELKAKIRCWIKEK 937 (943)
T ss_pred HhccCchhhhCccccccCCCCccCCcccccccHHHHHHHHhc-CCCCccccccCchhhcCCCHHHHHHHHHHHHHh
Confidence 3457999999999999999999999 8899999999999988 669999999999999999999999999998753
No 470
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=97.78 E-value=0.00018 Score=75.31 Aligned_cols=135 Identities=19% Similarity=0.200 Sum_probs=81.8
Q ss_pred eeeecCceEEEEEEEC-CeEEEEEEecCCCCCCc-------------------hh-----HHHHHHHHHhcCC--Cceee
Q 003384 471 KIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGP-------------------SE-----FQQEIDILSKIRH--PNLVT 523 (824)
Q Consensus 471 ~LG~G~fG~Vykg~~~-~~~VAvK~l~~~~~~~~-------------------~~-----f~~Ei~iL~~l~H--pnIv~ 523 (824)
.|..|--+.||+|... +..||||++......-. .. ..+|+.-|.++.. -.+.+
T Consensus 55 ~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVrvP~ 134 (268)
T COG1718 55 CISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVRVPE 134 (268)
T ss_pred eecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCCCCC
Confidence 3556677789998764 68899999875422110 00 2346666666532 22222
Q ss_pred EecccCCceEEEEEecCCC-ChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEecCCCcc
Q 003384 524 LVGACPEVWTLVYEYLPNG-SLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILLDANFVS 602 (824)
Q Consensus 524 L~g~~~~~~~LV~Ey~~gg-sL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILld~~~~v 602 (824)
-+++. ...|||||+... .-.-.| ...++.......+..++.+.+.-|-.- .++||+||+.=|||+. ++.+
T Consensus 135 Pi~~~--~nVLvMEfIg~~g~pAP~L----kDv~~e~~e~~~~~~~~v~~~~~l~~~--a~LVHgDLSEyNiL~~-~~~p 205 (268)
T COG1718 135 PIAFR--NNVLVMEFIGDDGLPAPRL----KDVPLELEEAEGLYEDVVEYMRRLYKE--AGLVHGDLSEYNILVH-DGEP 205 (268)
T ss_pred ceeec--CCeEEEEeccCCCCCCCCc----ccCCcCchhHHHHHHHHHHHHHHHHHh--cCcccccchhhheEEE-CCeE
Confidence 23222 346999998543 111112 111222224555666666666655442 4799999999999999 8899
Q ss_pred eeeccccccccc
Q 003384 603 KLSDFGISRFLS 614 (824)
Q Consensus 603 KL~DFGla~~~~ 614 (824)
.|+|||-|....
T Consensus 206 ~iID~~QaV~~~ 217 (268)
T COG1718 206 YIIDVSQAVTID 217 (268)
T ss_pred EEEECccccccC
Confidence 999999776443
No 471
>cd01987 USP_OKCHK USP domain is located between the N-terminal sensor domain and C-terminal catalytic domain of this Osmosensitive K+ channel histidine kinase family. The family of KdpD sensor kinase proteins regulates the kdpFABC operon responsible for potassium transport. The USP domain is homologous to the universal stress protein Usp Usp is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. Usp enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity.
Probab=97.77 E-value=0.00011 Score=68.87 Aligned_cols=77 Identities=10% Similarity=0.296 Sum_probs=61.7
Q ss_pred HHHHHHHHHHHHhhcCeeeEEEEeecCchHHHHHHHHHHcCCCEEEeccCcCccchhhhcccchhhHHhhhccCCCccEE
Q 003384 50 MHNHLDMCLLICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVRQQAPASCHI 129 (824)
Q Consensus 50 ~~~~l~~~~~~C~~~~V~~~~~~ie~~dv~~~i~e~i~~~~i~~LV~Ga~~~~~~~~~~~~~~s~~a~~v~~~a~~~C~v 129 (824)
.++.|+.+...+.+.++. ..++.+++++++|++++..++|+.||||++..+..++. +....+..|+..+ .-|.|
T Consensus 47 ~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~I~~~~~~~~~dllviG~~~~~~~~~~---~~Gs~~~~v~~~a-~~~~v 120 (124)
T cd01987 47 ERRRLAEALRLAEELGAE--VVTLPGDDVAEAIVEFAREHNVTQIVVGKSRRSRWREL---FRGSLVDRLLRRA-GNIDV 120 (124)
T ss_pred HHHHHHHHHHHHHHcCCE--EEEEeCCcHHHHHHHHHHHcCCCEEEeCCCCCchHHHH---hcccHHHHHHHhC-CCCeE
Confidence 456788888888887764 45667789999999999999999999999955555444 3344677899998 89999
Q ss_pred EEE
Q 003384 130 WFI 132 (824)
Q Consensus 130 ~~i 132 (824)
+++
T Consensus 121 ~v~ 123 (124)
T cd01987 121 HIV 123 (124)
T ss_pred EEe
Confidence 997
No 472
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=97.70 E-value=0.00014 Score=77.57 Aligned_cols=137 Identities=17% Similarity=0.138 Sum_probs=80.3
Q ss_pred eeecCceEEEEEEECCeEEEEEEecCCCCCCchhHHHHHHHHHhcCCCce-eeEecccCCceEEEEEecCCCChhhh---
Q 003384 472 IGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNL-VTLVGACPEVWTLVYEYLPNGSLEDR--- 547 (824)
Q Consensus 472 LG~G~fG~Vykg~~~~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnI-v~L~g~~~~~~~LV~Ey~~ggsL~~~--- 547 (824)
+..|-.+.+|+....+..+++|+.......-.-...+|..+++.+..-++ .++++.+. .++||||++|..+...
T Consensus 4 ~~~G~tn~~y~~~~~~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~i~~~~--~~~v~e~i~G~~~~~~~~~ 81 (256)
T TIGR02721 4 LSGGLTNRSWRIEHPGISFVWRPQSPVCKALGVDRQREYQILQALSALGLAPKPILVNE--HWLLVEWLEGEVITLDQFV 81 (256)
T ss_pred CCCcCcCCeEEEEeCCccEEEeeCCcccccccCcHHHHHHHHHHHHhcCCCCceEEEeC--CEEEEEeccCccccccccc
Confidence 55677789998887778899997654322111246789999999864323 33444443 3689999998765421
Q ss_pred --------------hhccC-CCCCCCHHHH-HHHHHH---------HHHHHHHHhhc-----CCCceEeccccCCcEEec
Q 003384 548 --------------LSCKD-NSPPLSWQTR-IRIATE---------LCSVLIFLHSC-----KPHSIVHGDLKPANILLD 597 (824)
Q Consensus 548 --------------L~~~~-~~~~l~~~~~-~~ia~q---------ia~aL~~LH~~-----~~~giiHrDLKp~NILld 597 (824)
|+... ...+++.... ..+..+ +...+..+-.. .+..++|+|+.|.|||++
T Consensus 82 ~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~Dl~~~Nil~~ 161 (256)
T TIGR02721 82 ALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHMDVHAYNLVVT 161 (256)
T ss_pred CchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecCCCCcCcEEEe
Confidence 11111 1122232211 111111 11112222111 123589999999999999
Q ss_pred CCCcceeecccccc
Q 003384 598 ANFVSKLSDFGISR 611 (824)
Q Consensus 598 ~~~~vKL~DFGla~ 611 (824)
+++ +.|+||+.|.
T Consensus 162 ~~~-~~lIDwE~a~ 174 (256)
T TIGR02721 162 PQG-LKLIDWEYAS 174 (256)
T ss_pred CCC-CEEEeccccC
Confidence 887 7899999765
No 473
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=97.70 E-value=0.00014 Score=84.50 Aligned_cols=139 Identities=19% Similarity=0.250 Sum_probs=92.0
Q ss_pred ceeeecCceEEEEEEEC-CeEEEEEEecCCCCCCc---------------------------h----------hHHHHHH
Q 003384 470 LKIGEGGYGSIYKGLLR-HMQVAIKMLHPHSLQGP---------------------------S----------EFQQEID 511 (824)
Q Consensus 470 ~~LG~G~fG~Vykg~~~-~~~VAvK~l~~~~~~~~---------------------------~----------~f~~Ei~ 511 (824)
+.||.-+.|.||+|+.+ |..||||+-++.-.... + .|.+|.+
T Consensus 167 ~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA~ 246 (538)
T KOG1235|consen 167 EPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEAK 246 (538)
T ss_pred chhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHHH
Confidence 35899999999999987 57899999776422110 0 1344544
Q ss_pred HHHhc----CCCc------eeeEecccCCceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCC
Q 003384 512 ILSKI----RHPN------LVTLVGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKP 581 (824)
Q Consensus 512 iL~~l----~Hpn------Iv~L~g~~~~~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~ 581 (824)
-..++ .|-+ |.++|-.+.....|+||||+|..+.|.-.-... .++.. .|+..+.++ |++....
T Consensus 247 Nae~~~~~f~~~~~~~~V~VP~Vy~~~st~RVLtME~~~G~~i~Dl~~i~~~--gi~~~---~i~~~l~~~--~~~qIf~ 319 (538)
T KOG1235|consen 247 NAERFRENFKDFSLLTYVLVPKVYWDLSTKRVLTMEYVDGIKINDLDAIDKR--GISPH---DILNKLVEA--YLEQIFK 319 (538)
T ss_pred hHHHHHHHHHhcccccceeCCeehhhcCcceEEEEEecCCccCCCHHHHHHc--CCCHH---HHHHHHHHH--HHHHHHh
Confidence 43333 3444 555666666678899999999988776532222 23333 333333332 3333333
Q ss_pred CceEeccccCCcEEecC----CCcceeecccccccccc
Q 003384 582 HSIVHGDLKPANILLDA----NFVSKLSDFGISRFLSQ 615 (824)
Q Consensus 582 ~giiHrDLKp~NILld~----~~~vKL~DFGla~~~~~ 615 (824)
.|++|+|-.|.|||+.. ++.+.+.|||+...+..
T Consensus 320 ~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~ 357 (538)
T KOG1235|consen 320 TGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISH 357 (538)
T ss_pred cCCccCCCCCCcEEEecCCCCCccEEEEcccccccccH
Confidence 68999999999999983 67899999999876654
No 474
>COG5113 UFD2 Ubiquitin fusion degradation protein 2 [Posttranslational modification, protein turnover, chaperones]
Probab=97.64 E-value=7.1e-05 Score=85.00 Aligned_cols=75 Identities=27% Similarity=0.473 Sum_probs=66.9
Q ss_pred CCCCCCCCCCCcccchhhhccCCcccc-CCccchhhhhhhhhcCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHh
Q 003384 748 SEERCEPPPYFTCPIFQEVMQDPHVAA-DGFTYEAEALKGWLDSGHETSPMTNLPLAHKNLVPNLALRSAIQEWLQQ 823 (824)
Q Consensus 748 ~e~~~~~P~~f~cPi~~evm~dPvi~~-~g~tye~~~i~~wl~~~~~t~p~t~~~l~~~~l~pn~~lr~~i~~~~~~ 823 (824)
.+...++|++|..|.+..+|.|||+.+ ++.+.+|+.|..|+.+ +.|||..+.||.-.+++||-.||+.|..|...
T Consensus 845 eED~GDvPDeFlDPLmftimkdPV~Lp~S~i~IDRSTikahlls-d~tDPFNRmPLtlddVtpn~eLrekIn~f~k~ 920 (929)
T COG5113 845 EEDMGDVPDEFLDPLMFTIMKDPVKLPTSRITIDRSTIKAHLLS-DGTDPFNRMPLTLDDVTPNAELREKINRFYKC 920 (929)
T ss_pred hhhccCCchhhhCchhhhcccCCeecccccccccHHHHHHHHhc-CCCCccccCCCchhhcCCCHHHHHHHHHHHhc
Confidence 344668999999999999999999975 4579999999999988 55999999999999999999999999988753
No 475
>PRK05231 homoserine kinase; Provisional
Probab=97.60 E-value=0.00054 Score=75.41 Aligned_cols=139 Identities=19% Similarity=0.248 Sum_probs=78.4
Q ss_pred ceeeecCceEEEEEEECCeEEEEEEecCCCCCCchhHHHHHHHHHhcC-----CCceeeE-----ecccCCceEEEEEec
Q 003384 470 LKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIR-----HPNLVTL-----VGACPEVWTLVYEYL 539 (824)
Q Consensus 470 ~~LG~G~fG~Vykg~~~~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~-----HpnIv~L-----~g~~~~~~~LV~Ey~ 539 (824)
+.|+.|....+|+....+..+++|++.. .....+..|+.++..|. -|.++.- +.......+++++|+
T Consensus 28 ~~l~~G~~n~~y~v~t~~g~~vLK~~~~---~~~~~l~~~~~~l~~L~~~glpvP~~i~~~~G~~~~~~~g~~~~l~~~l 104 (319)
T PRK05231 28 KGIAEGIENSNFFLTTTQGEYVLTLFER---LTAEDLPFFLGLMQHLAARGVPVPAPVARRDGAALGELAGKPAAIVTFL 104 (319)
T ss_pred chhccccccceEEEEeCCCcEEEEEecc---CChHHhHHHHHHHHHHHHCCCCCCcceeCCCCCEeeeeCCEEEEEEEec
Confidence 4466777788999877767899998762 23345556667766663 2333321 111234568999999
Q ss_pred CCCChhh-----------hh---hccCC--------CCCCCH-HHHHHH------------H-HHHHHHHHHHhh----c
Q 003384 540 PNGSLED-----------RL---SCKDN--------SPPLSW-QTRIRI------------A-TELCSVLIFLHS----C 579 (824)
Q Consensus 540 ~ggsL~~-----------~L---~~~~~--------~~~l~~-~~~~~i------------a-~qia~aL~~LH~----~ 579 (824)
+|..+.. .| +.... ...+.| .....- . ..+...+..+.. .
T Consensus 105 ~G~~~~~~~~~~~~~~G~~LA~lH~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 184 (319)
T PRK05231 105 EGKWPRAPTAAHCAEVGEMLARMHLAGRDFPLERPNLRGLAWWRELAPRLLPFLADEQAALLEAELAAQLAFLASAAWPA 184 (319)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHhhhhcCCccCCCCCChHHHHHHHHHHhhccChhHHHHHHHHHHHHHHhhhcccccc
Confidence 9875421 11 11000 011112 111110 0 111122233321 1
Q ss_pred CCCceEeccccCCcEEecCCCcceeecccccc
Q 003384 580 KPHSIVHGDLKPANILLDANFVSKLSDFGISR 611 (824)
Q Consensus 580 ~~~giiHrDLKp~NILld~~~~vKL~DFGla~ 611 (824)
-+.++||+|+.|.|||++.+...-|+||+.+.
T Consensus 185 lp~~liHgD~~~~Nil~~~~~~~~iIDf~~~~ 216 (319)
T PRK05231 185 LPRGVIHADLFRDNVLFEGDRLSGFIDFYFAC 216 (319)
T ss_pred CCcccCCCCCCCCcEEEECCceEEEEeccccc
Confidence 35689999999999999977666899999764
No 476
>PRK10593 hypothetical protein; Provisional
Probab=97.60 E-value=0.00063 Score=74.44 Aligned_cols=73 Identities=22% Similarity=0.132 Sum_probs=55.0
Q ss_pred ceeeecCceEEEEEEECCeEEEEEEecCCCCCCchhHHHHHHHHHhcCC---CceeeEecccC-----CceEEEEEecCC
Q 003384 470 LKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRH---PNLVTLVGACP-----EVWTLVYEYLPN 541 (824)
Q Consensus 470 ~~LG~G~fG~Vykg~~~~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~H---pnIv~L~g~~~-----~~~~LV~Ey~~g 541 (824)
..||.|..+.||+-...+..+.+|..+. ......|..|...|+.|.- -.+.++++.|. ...+||||+++|
T Consensus 20 ~~i~~G~~~~vy~~~~~~~~~~~k~~~~--~~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVmE~i~G 97 (297)
T PRK10593 20 ECISEQPYAALWALYDSQGNPMPLMARS--FSTPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLLERLRG 97 (297)
T ss_pred eecCCccceeEEEEEcCCCCEEEEEecc--cccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEEeccCC
Confidence 4599999999999876656677887543 1234589999999998853 35777887663 347999999998
Q ss_pred CCh
Q 003384 542 GSL 544 (824)
Q Consensus 542 gsL 544 (824)
+++
T Consensus 98 ~~~ 100 (297)
T PRK10593 98 VSV 100 (297)
T ss_pred Eec
Confidence 765
No 477
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=97.60 E-value=0.00032 Score=73.50 Aligned_cols=139 Identities=19% Similarity=0.279 Sum_probs=81.3
Q ss_pred ceeeecCceEEEEEEEC---CeEEEEEEecCCCCCCchhHHHHHHHHHhcCCCc-eeeEecccCCceEEEEEecCCCChh
Q 003384 470 LKIGEGGYGSIYKGLLR---HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPN-LVTLVGACPEVWTLVYEYLPNGSLE 545 (824)
Q Consensus 470 ~~LG~G~fG~Vykg~~~---~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~Hpn-Iv~L~g~~~~~~~LV~Ey~~ggsL~ 545 (824)
+.|..|-...+|+.... +..|++|+...... ..-...+|+.++..+...+ ..++++.+.. .+||||++|.++.
T Consensus 4 ~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~-~~~d~~~E~~~~~~l~~~gl~P~v~~~~~~--~~l~e~i~G~~l~ 80 (235)
T cd05157 4 KRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTE-LIIDRERELRIHKLLSKHGLAPKLYATFQN--GLIYEFIPGRTLE 80 (235)
T ss_pred EEcCCcccceEEEEEcCCCCCCeEEEEEccCCcc-ceecHHHHHHHHHHHHhCCCCCeEEEEeCC--cEEEEeeCCCcCC
Confidence 45777778899988765 46788997654321 1123457999999885333 3445554443 4799999997763
Q ss_pred hh-----------------hhccCCC--------CCCC-HHHHHHHHH----------------------HHHHHHHHH-
Q 003384 546 DR-----------------LSCKDNS--------PPLS-WQTRIRIAT----------------------ELCSVLIFL- 576 (824)
Q Consensus 546 ~~-----------------L~~~~~~--------~~l~-~~~~~~ia~----------------------qia~aL~~L- 576 (824)
.. |+..... .... +..+..+.. .+...+..|
T Consensus 81 ~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 160 (235)
T cd05157 81 PEDLRNPKIYRLIARELAKLHSIKPPEAISSPGTPKPILWPTIRKWINLVPTEFKKPEKFQKKTKAISFEQLRDEISWLK 160 (235)
T ss_pred HHHccChHHHHHHHHHHHHHhcccccccccccCCCCCcHHHHHHHHHHHhHHhhccccchhhhhccccHHHHHHHHHHHH
Confidence 21 0111111 1111 222112211 111111122
Q ss_pred ---hhc-CCCceEeccccCCcEEecC-CCcceeecccccc
Q 003384 577 ---HSC-KPHSIVHGDLKPANILLDA-NFVSKLSDFGISR 611 (824)
Q Consensus 577 ---H~~-~~~giiHrDLKp~NILld~-~~~vKL~DFGla~ 611 (824)
... .+..++|+|+.+.|||++. ++.+.|+||..|.
T Consensus 161 ~~l~~~~~~~~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~ 200 (235)
T cd05157 161 ELLSALNSPIVFCHNDLLSGNIIYNEEKNSVKFIDYEYAG 200 (235)
T ss_pred HHhcccCCCEEEEcCCCCcCcEEEeCCCCCEEEEEcccCC
Confidence 111 2357999999999999998 5789999999765
No 478
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=97.49 E-value=0.00045 Score=75.05 Aligned_cols=140 Identities=16% Similarity=0.177 Sum_probs=86.5
Q ss_pred cceeeecCceEEEEEEECCeEEEEEEecCCCCCCchhHHHHHHHHHhcCCCc--eeeEeccc--------CCceEEEEEe
Q 003384 469 SLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPN--LVTLVGAC--------PEVWTLVYEY 538 (824)
Q Consensus 469 ~~~LG~G~fG~Vykg~~~~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~Hpn--Iv~L~g~~--------~~~~~LV~Ey 538 (824)
...|..|....+|+....+..+++|+... .....+..|+.++..|.+-+ +.+++... .+..++|++|
T Consensus 19 i~~i~~G~~n~~y~v~~~~~~~vLr~~~~---~~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~~~l~~~ 95 (296)
T cd05153 19 FEGISAGIENTNYFVTTDSGRYVLTLFEK---VSAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKPAALVEF 95 (296)
T ss_pred eecccCccccceEEEEeCCCcEEEEEcCC---CChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCceEEEEEe
Confidence 34577777789999877777899998764 23456778888888885322 44444322 2345789999
Q ss_pred cCCCChhh----hh----------hcc----CC----CCCCCHHHHH----------HHHHHHHHHHHHHhh----cCCC
Q 003384 539 LPNGSLED----RL----------SCK----DN----SPPLSWQTRI----------RIATELCSVLIFLHS----CKPH 582 (824)
Q Consensus 539 ~~ggsL~~----~L----------~~~----~~----~~~l~~~~~~----------~ia~qia~aL~~LH~----~~~~ 582 (824)
++|..+.. .+ +.. .. .....|.... .....+..++.++.. ..+.
T Consensus 96 i~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~ 175 (296)
T cd05153 96 LAGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAFDPSDLPR 175 (296)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhhhhhcCCC
Confidence 99877532 00 100 00 0111222111 011113334444443 2346
Q ss_pred ceEeccccCCcEEecCCCcceeecccccc
Q 003384 583 SIVHGDLKPANILLDANFVSKLSDFGISR 611 (824)
Q Consensus 583 giiHrDLKp~NILld~~~~vKL~DFGla~ 611 (824)
+++|+|+.|.|||++.++.+.|+||+.+.
T Consensus 176 ~l~HgD~~~~Nil~~~~~~~~iIDfe~a~ 204 (296)
T cd05153 176 GVIHADLFRDNVLFDGDELSGVIDFYFAC 204 (296)
T ss_pred cCCccCcCcccEEEeCCceEEEeehhhhc
Confidence 79999999999999998778899999764
No 479
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=97.49 E-value=0.0008 Score=76.22 Aligned_cols=74 Identities=16% Similarity=0.096 Sum_probs=56.1
Q ss_pred ceeeecCceEEEEEEECC--eEEEEEEecCCC-------CCCchhHHHHHHHHHhcC---CCceeeEecccCCceEEEEE
Q 003384 470 LKIGEGGYGSIYKGLLRH--MQVAIKMLHPHS-------LQGPSEFQQEIDILSKIR---HPNLVTLVGACPEVWTLVYE 537 (824)
Q Consensus 470 ~~LG~G~fG~Vykg~~~~--~~VAvK~l~~~~-------~~~~~~f~~Ei~iL~~l~---HpnIv~L~g~~~~~~~LV~E 537 (824)
+.||.|.+..||++...+ +.|+||.-.+.. ....+.+..|.+.|..+. ..++.+++.+..+..++|||
T Consensus 32 ~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~D~~~~~lVME 111 (401)
T PRK09550 32 REIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHYDEELAVTVME 111 (401)
T ss_pred eEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEECCCCCEEEEe
Confidence 469999999999998875 389999854221 123456788999988873 35678888888888899999
Q ss_pred ecCCCC
Q 003384 538 YLPNGS 543 (824)
Q Consensus 538 y~~ggs 543 (824)
|+++..
T Consensus 112 ~L~~~~ 117 (401)
T PRK09550 112 DLSDHK 117 (401)
T ss_pred cCCCcc
Confidence 998743
No 480
>cd01988 Na_H_Antiporter_C The C-terminal domain of a subfamily of Na+ /H+ antiporter existed in bacteria and archea . Na+/H+ exchange proteins eject protons from cells, effectively eliminating excess acid from actively metabolising cells. Na+ /H+ exchange activity is also crucial for the regulation of cell volume, and for the reabsorption of NaCl across renal, intestinal, and other epithelia. These antiports exchange Na+ for H+ in an electroneutral manner, and this activity is carried out by a family of Na+ /H+ exchangers, or NHEs, which are known to be present in both prokaryotic and eukaryotic cells. These exchangers are highly-regulated (glyco)phosphoproteins, which, based on their primary structure, appear to contain 10-12 membrane-spanning regions (M) at the N-terminus and a large cytoplasmic region at the C-terminus. The transmembrane regions M3-M12 share identity wit h other members of the family. The M6 and M7 regions are highly conserved. Thus, this is thought to be the regio
Probab=97.37 E-value=0.00092 Score=62.92 Aligned_cols=82 Identities=18% Similarity=0.234 Sum_probs=67.6
Q ss_pred HHHHHHHHHHHHHHHHhhcCeeeEEEEeecCchHHHHHHHHHHcCCCEEEeccCcCccchhhhcccchhhHHhhhccCCC
Q 003384 46 ERQDMHNHLDMCLLICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVRQQAPA 125 (824)
Q Consensus 46 e~~~~~~~l~~~~~~C~~~~V~~~~~~ie~~dv~~~i~e~i~~~~i~~LV~Ga~~~~~~~~~~~~~~s~~a~~v~~~a~~ 125 (824)
+....++.+..+...+...++.++.+++.++++.++|++++..++++.+|||.+....+.+ .+-+..+..|.+.++
T Consensus 50 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~I~~~a~~~~~dlIV~G~~~~~~~~~---~~lGs~~~~v~~~~~- 125 (132)
T cd01988 50 NVQRARKLLRQAERIAASLGVPVHTIIRIDHDIASGILRTAKERQADLIIMGWHGSTSLRD---RLFGGVIDQVLESAP- 125 (132)
T ss_pred HHHHHHHHHHHHHHHhhhcCCceEEEEEecCCHHHHHHHHHHhcCCCEEEEecCCCCCccc---eecCchHHHHHhcCC-
Confidence 4456789999999999999999999998888999999999999999999999995544422 222346778999977
Q ss_pred ccEEEEE
Q 003384 126 SCHIWFI 132 (824)
Q Consensus 126 ~C~v~~i 132 (824)
|.|.+|
T Consensus 126 -~pvlvv 131 (132)
T cd01988 126 -CDVAVV 131 (132)
T ss_pred -CCEEEe
Confidence 999876
No 481
>PRK15118 universal stress global response regulator UspA; Provisional
Probab=97.34 E-value=0.00067 Score=65.46 Aligned_cols=80 Identities=13% Similarity=0.222 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCeeeEEEEeecCchHHHHHHHHHHcCCCEEEeccCcCccchhhhcccchhhHHhhhc
Q 003384 42 YREIERQDMHNHLDMCLLICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVRQ 121 (824)
Q Consensus 42 ~~~~e~~~~~~~l~~~~~~C~~~~V~~~~~~ie~~dv~~~i~e~i~~~~i~~LV~Ga~~~~~~~~~~~~~~s~~a~~v~~ 121 (824)
+++..+....+.|+. ++...++.+...++..++++++|++++.+++++.+|||++ .+.. + .+- ..|..|+.
T Consensus 58 ~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~~~G~p~~~I~~~a~~~~~DLIV~Gs~-~~~~-~---~lg-Sva~~v~~ 128 (144)
T PRK15118 58 MQKRISEETHHALTE---LSTNAGYPITETLSGSGDLGQVLVDAIKKYDMDLVVCGHH-QDFW-S---KLM-SSARQLIN 128 (144)
T ss_pred HHHHHHHHHHHHHHH---HHHhCCCCceEEEEEecCHHHHHHHHHHHhCCCEEEEeCc-ccHH-H---HHH-HHHHHHHh
Confidence 344344444444544 3466788887777777999999999999999999999999 2221 2 233 47889999
Q ss_pred cCCCccEEEEE
Q 003384 122 QAPASCHIWFI 132 (824)
Q Consensus 122 ~a~~~C~v~~i 132 (824)
+++ |.|.+|
T Consensus 129 ~a~--~pVLvv 137 (144)
T PRK15118 129 TVH--VDMLIV 137 (144)
T ss_pred hCC--CCEEEe
Confidence 977 999998
No 482
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=97.33 E-value=0.0017 Score=66.45 Aligned_cols=123 Identities=25% Similarity=0.372 Sum_probs=89.1
Q ss_pred CCCCccceeeecCc-eEEEEEEECCeEEEEEEecC---CCC------------------CCchhHHHHHHHHHhcC---C
Q 003384 464 HNFDPSLKIGEGGY-GSIYKGLLRHMQVAIKMLHP---HSL------------------QGPSEFQQEIDILSKIR---H 518 (824)
Q Consensus 464 ~~f~~~~~LG~G~f-G~Vykg~~~~~~VAvK~l~~---~~~------------------~~~~~f~~Ei~iL~~l~---H 518 (824)
.+++..+.||.|.- |.||++...+..+|+|++.. ... .-...|..|.+...+|+ +
T Consensus 37 ~~I~flefLg~g~~~~~V~kv~I~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~~~ 116 (207)
T PF13095_consen 37 DDIEFLEFLGHGSHDGYVFKVEIDGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEAGR 116 (207)
T ss_pred CcEeeeeecCCCCceeEEEEEEECCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhccc
Confidence 67888999999999 99999999999999999322 110 00124788998888874 4
Q ss_pred Cce--eeEeccc--C------------------CceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHH
Q 003384 519 PNL--VTLVGAC--P------------------EVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFL 576 (824)
Q Consensus 519 pnI--v~L~g~~--~------------------~~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~L 576 (824)
.++ |+++|+. . ..+.||.||++... .+. .+-+.+|.+-|..+
T Consensus 117 e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~------------~~~----~~~~~~~~~dl~~~ 180 (207)
T PF13095_consen 117 EGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP------------PLQ----IRDIPQMLRDLKIL 180 (207)
T ss_pred cCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc------------ccc----hhHHHHHHHHHHHH
Confidence 455 8888875 1 12468888886543 122 22344566777788
Q ss_pred hhcCCCceEeccccCCcEEecCCCcceeeccccc
Q 003384 577 HSCKPHSIVHGDLKPANILLDANFVSKLSDFGIS 610 (824)
Q Consensus 577 H~~~~~giiHrDLKp~NILld~~~~vKL~DFGla 610 (824)
|. .||+-+|+++.|.. .-||+|||.+
T Consensus 181 ~k---~gI~~~Dv~~~ny~-----~G~lvDfs~~ 206 (207)
T PF13095_consen 181 HK---LGIVPRDVKPRNYR-----GGKLVDFSSS 206 (207)
T ss_pred HH---CCeeeccCcccccc-----CCEEEecccC
Confidence 88 89999999999987 2389999964
No 483
>PF00582 Usp: Universal stress protein family; InterPro: IPR006016 The universal stress protein UspA P28242 from SWISSPROT [] is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. UspA enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae UspA [] reveals an alpha/beta fold similar to that of the Methanocaldococcus jannaschii (Methanococcus jannaschii) MJ0577 protein, which binds ATP [], though UspA lacks ATP-binding activity.; GO: 0006950 response to stress; PDB: 3DLO_C 3QTB_A 2PFS_A 3TNJ_A 1JMV_D 3FH0_B 3FDX_B 3AB7_A 3AB8_A 2GM3_F ....
Probab=97.31 E-value=0.00056 Score=63.99 Aligned_cols=69 Identities=19% Similarity=0.237 Sum_probs=56.6
Q ss_pred HHHhhcCeeeEEEEeecCchHHHHHHHHHHcCCCEEEeccCcCccchhhhcccchhhHHhhhccCCCccEEEEE
Q 003384 59 LICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVRQQAPASCHIWFI 132 (824)
Q Consensus 59 ~~C~~~~V~~~~~~ie~~dv~~~i~e~i~~~~i~~LV~Ga~~~~~~~~~~~~~~s~~a~~v~~~a~~~C~v~~i 132 (824)
..+...+.......+..++++++|++++..++++.+|||++..+...+ -.-+..+..|++.+| |.|++|
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~dliv~G~~~~~~~~~---~~~gs~~~~l~~~~~--~pVlvv 139 (140)
T PF00582_consen 71 EEAEAEGGIVIEVVIESGDVADAIIEFAEEHNADLIVMGSRGRSGLER---LLFGSVAEKLLRHAP--CPVLVV 139 (140)
T ss_dssp HHHHHHTTSEEEEEEEESSHHHHHHHHHHHTTCSEEEEESSSTTSTTT---SSSHHHHHHHHHHTS--SEEEEE
T ss_pred HHHhhhccceeEEEEEeeccchhhhhccccccceeEEEeccCCCCccC---CCcCCHHHHHHHcCC--CCEEEe
Confidence 677888888888888899999999999999999999999994333333 234556779999988 999886
No 484
>cd00293 USP_Like Usp: Universal stress protein family. The universal stress protein Usp is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. Usp enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae Usp reveals an alpha/beta fold similar to that of the Methanococcus jannaschii MJ0577 protein, which binds ATP, athough Usp lacks ATP-binding activity.
Probab=97.29 E-value=0.0014 Score=60.64 Aligned_cols=86 Identities=21% Similarity=0.299 Sum_probs=65.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCeeeEEEEeecCchHHHHHHHHHHcCCCEEEeccCcCccchhhhcccchhhHHhhh
Q 003384 41 AYREIERQDMHNHLDMCLLICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVR 120 (824)
Q Consensus 41 ~~~~~e~~~~~~~l~~~~~~C~~~~V~~~~~~ie~~dv~~~i~e~i~~~~i~~LV~Ga~~~~~~~~~~~~~~s~~a~~v~ 120 (824)
.+...+..+.++.|+.|...|...+|.+...+.. ++.+++|++++..++++.||||+...+.+.+ ...+..+..++
T Consensus 45 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~dlvvig~~~~~~~~~---~~~~~~~~~ll 120 (130)
T cd00293 45 ELAELLEEEARALLEALREALAEAGVKVETVVLE-GDPAEAILEAAEELGADLIVMGSRGRSGLRR---LLLGSVAERVL 120 (130)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhcCCCceEEEEec-CCCHHHHHHHHHHcCCCEEEEcCCCCCccce---eeeccHHHHHH
Confidence 4445566777899999999999999999888776 5569999999999999999999995544322 23344566787
Q ss_pred ccCCCccEEEEE
Q 003384 121 QQAPASCHIWFI 132 (824)
Q Consensus 121 ~~a~~~C~v~~i 132 (824)
+. .-|.|+++
T Consensus 121 ~~--~~~pvliv 130 (130)
T cd00293 121 RH--APCPVLVV 130 (130)
T ss_pred hC--CCCCEEeC
Confidence 77 34777653
No 485
>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]
Probab=97.27 E-value=9.3e-05 Score=92.04 Aligned_cols=175 Identities=15% Similarity=0.040 Sum_probs=122.7
Q ss_pred EEEEEEecCCCCCCchh-----HHHHHHHHHhcCCCceeeEecccC----CceEEEEEecCCCChhhhhhcc-CCCCCCC
Q 003384 489 QVAIKMLHPHSLQGPSE-----FQQEIDILSKIRHPNLVTLVGACP----EVWTLVYEYLPNGSLEDRLSCK-DNSPPLS 558 (824)
Q Consensus 489 ~VAvK~l~~~~~~~~~~-----f~~Ei~iL~~l~HpnIv~L~g~~~----~~~~LV~Ey~~ggsL~~~L~~~-~~~~~l~ 558 (824)
.+.+|+.+....+...+ ...|.+-++...|+++...+.-.+ ..-+.+++|+.+|.+.+.|.+. ...+++.
T Consensus 1254 ~Fk~~I~ke~d~e~LsePlkemll~e~de~~~~~h~~~~~~p~rI~ps~s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld 1333 (2724)
T KOG1826|consen 1254 WFKFSIYKEYDFENLSEPLKEMLLSERDELREAKHYLTEVDPLRIPPSESTEEYIRSLYVEFGKLFSIIIKGLEESPDLD 1333 (2724)
T ss_pred eeEEEeehhhhHHHHhhHHHHhhhhhhhhhhhhhceeeecccccCCCCCChHHHHHHHHHHHhHHHHHHHhccccCCcch
Confidence 35666665544333222 334555566678999887665442 2457899999999999988654 3344444
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCC--CceEeccccCCcEEecCCCcceeeccccccccccccccCCCccccccCCCCCCcc
Q 003384 559 WQTRIRIATELCSVLIFLHSCKP--HSIVHGDLKPANILLDANFVSKLSDFGISRFLSQNEISSNNTTLCCRTDPKGTFA 636 (824)
Q Consensus 559 ~~~~~~ia~qia~aL~~LH~~~~--~giiHrDLKp~NILld~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~ 636 (824)
..-......+......-+|.... +--+|++||+.|.+|..++.+|++++|+.+...... ...+...+++.
T Consensus 1334 ~~~v~~~~kvsvl~~~~~ls~tnlg~T~v~~~Lkf~lpmIVtny~v~~gk~gLdKIknp~~--------sf~Gl~l~sp~ 1405 (2724)
T KOG1826|consen 1334 RSPVHLRHKVSVLNRNVILSLTNLGNTNVSKSLKFTLPMIVTNYNVKLGKGGLDKIKNPVL--------SFFGLELCSPI 1405 (2724)
T ss_pred hchHHHHHHHHHhccchhhhcccCCccchhhhhhhhccceecCCcccccccccccccCchH--------hhhhhhhCCHH
Confidence 44444333333455555555332 236899999999999999999999999998322211 11245568899
Q ss_pred cCChhhhccCCCCcchhHHhHHHHHHHHHhCCCCC
Q 003384 637 YMDPEFLASGELTPKSDVYSFGIILLRLLTGRPAL 671 (824)
Q Consensus 637 Y~APE~l~~~~~t~ksDVwSlGvvL~ELltG~~Pf 671 (824)
|+.|++...-.++.++|+|..|+-+|+.--|.++|
T Consensus 1406 ~v~qli~N~ik~t~rsdilr~s~~ly~rs~~n~~f 1440 (2724)
T KOG1826|consen 1406 YVLQLIKNEIKFTKRSDILRRSLSLYLRSDGNAYF 1440 (2724)
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHhcccHHH
Confidence 99999998889998999999999999999999888
No 486
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=97.18 E-value=0.0046 Score=67.77 Aligned_cols=141 Identities=18% Similarity=0.211 Sum_probs=83.8
Q ss_pred cceeeecCceEEEEEEECCeEEEEEEecCCCCCCchhHHHHHHHHHhcCCCc--eeeEeccc--------CCceEEEEEe
Q 003384 469 SLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPN--LVTLVGAC--------PEVWTLVYEY 538 (824)
Q Consensus 469 ~~~LG~G~fG~Vykg~~~~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~Hpn--Iv~L~g~~--------~~~~~LV~Ey 538 (824)
...|+.|-...+|+....+..+++|+.+... ....+..|++++..|...+ +.+++... .+..+++++|
T Consensus 27 i~~~~~G~~n~~y~v~t~~~~~vLK~~~~~~--~~~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~~~~g~~~~l~e~ 104 (307)
T TIGR00938 27 LKGIAEGVENSNYLLTTDVGRYILTLYEKRV--KAEELPFFLALTTHLAARGLPVPKPVKSRDGRQLSTLAGKPACLVEF 104 (307)
T ss_pred ccccCCccccceEEEEeCCCcEEEEEecCCC--CHHHHHHHHHHHHHHHHCCCCCCccccCCCCCeehhcCCeEEEEEEe
Confidence 3456777778999887666678889875421 2446677888888774222 34444332 2346789999
Q ss_pred cCCCChhh-----------h---hhccCCC--CC-------CCHHHHHH------------HHHHHHHHHHHHhh----c
Q 003384 539 LPNGSLED-----------R---LSCKDNS--PP-------LSWQTRIR------------IATELCSVLIFLHS----C 579 (824)
Q Consensus 539 ~~ggsL~~-----------~---L~~~~~~--~~-------l~~~~~~~------------ia~qia~aL~~LH~----~ 579 (824)
++|..+.. . ++..... .+ -.|..... ....+...+.++.. .
T Consensus 105 i~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~l~~~~~~~ 184 (307)
T TIGR00938 105 LQGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQLEAHMGAELDKELDYLDKFWPRD 184 (307)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhcccccCHHHHHHHHHHHHHHHhhhhhc
Confidence 99865421 0 1110000 00 11111100 01123334555532 2
Q ss_pred CCCceEeccccCCcEEecCCCcceeecccccc
Q 003384 580 KPHSIVHGDLKPANILLDANFVSKLSDFGISR 611 (824)
Q Consensus 580 ~~~giiHrDLKp~NILld~~~~vKL~DFGla~ 611 (824)
.+.+++|+|+.+.||+++.++.+.|+||+.+.
T Consensus 185 ~~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~ 216 (307)
T TIGR00938 185 LPRGVIHADLFPDNVLFDGDSVKGVIDFYFAC 216 (307)
T ss_pred CCCccCCCCCCcCcEEEECCceEEEeeccccc
Confidence 35789999999999999998877899999754
No 487
>PRK15456 universal stress protein UspG; Provisional
Probab=97.16 E-value=0.0022 Score=61.75 Aligned_cols=86 Identities=16% Similarity=0.166 Sum_probs=66.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCeeeEEEEeecCchHHHHHHHHHHcCCCEEEeccCcCccchhhhcccchhhHHhh
Q 003384 40 QAYREIERQDMHNHLDMCLLICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISV 119 (824)
Q Consensus 40 ~~~~~~e~~~~~~~l~~~~~~C~~~~V~~~~~~ie~~dv~~~i~e~i~~~~i~~LV~Ga~~~~~~~~~~~~~~s~~a~~v 119 (824)
+.|.+..++..++.|+++.......+++++..+.+ +++++.|++++.+++++.+|||++.. +..+ -+-...|..|
T Consensus 56 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~~v~~-G~~~~~I~~~a~~~~~DLIVmG~~g~-~~~~---~llGS~a~~v 130 (142)
T PRK15456 56 RRFEEHLQHEAEERLQTMVSHFTIDPSRIKQHVRF-GSVRDEVNELAEELGADVVVIGSRNP-SIST---HLLGSNASSV 130 (142)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhCCCCcceEEEEcC-CChHHHHHHHHhhcCCCEEEEcCCCC-Cccc---eecCccHHHH
Confidence 34666667777888888888877778888877666 79999999999999999999999942 2222 1223467789
Q ss_pred hccCCCccEEEEE
Q 003384 120 RQQAPASCHIWFI 132 (824)
Q Consensus 120 ~~~a~~~C~v~~i 132 (824)
.+.++ |.|.+|
T Consensus 131 ~~~a~--~pVLvV 141 (142)
T PRK15456 131 IRHAN--LPVLVV 141 (142)
T ss_pred HHcCC--CCEEEe
Confidence 99976 999886
No 488
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=97.15 E-value=0.0015 Score=71.31 Aligned_cols=138 Identities=22% Similarity=0.290 Sum_probs=81.8
Q ss_pred eeeecCceEEEEEEECC--------eEEEEEEecCCCCCCchhHHHHHHHHHhcCCCc-eeeEecccCCceEEEEEecCC
Q 003384 471 KIGEGGYGSIYKGLLRH--------MQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPN-LVTLVGACPEVWTLVYEYLPN 541 (824)
Q Consensus 471 ~LG~G~fG~Vykg~~~~--------~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~Hpn-Iv~L~g~~~~~~~LV~Ey~~g 541 (824)
.|..|--..||+....+ ..+++|+..... .......+|..++..+...+ ..++++++.+ .+|+||++|
T Consensus 5 ~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~-~~~~~r~~E~~~~~~l~~~g~~P~~~~~~~~--~~v~e~i~G 81 (302)
T cd05156 5 KISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSV-ELLIDRERELVVFARLSERNLGPKLYGIFPN--GRIEEFIPS 81 (302)
T ss_pred EecCcccceeEEEEcCCcccccCCCCeEEEEEecCCC-cceechHHHHHHHHHHHhCCCCCceEEEeCC--CchhheeCC
Confidence 45556667888877653 678999876533 22345678999998885332 3355666543 368999998
Q ss_pred CChhhh-----------------hhccCCCC------CCC--HHHHHHH--------------------------HHHHH
Q 003384 542 GSLEDR-----------------LSCKDNSP------PLS--WQTRIRI--------------------------ATELC 570 (824)
Q Consensus 542 gsL~~~-----------------L~~~~~~~------~l~--~~~~~~i--------------------------a~qia 570 (824)
..+... |+...... ..+ +.....+ ...+.
T Consensus 82 ~~l~~~~~~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (302)
T cd05156 82 RTLTTEELRDPDISAEIARRMAKLHSIVVPLSPEERDLTPAIWKLLKQWLDLAETVIEIVDSDSEKLLEVELSLFLEDEA 161 (302)
T ss_pred CcCCHhHcCCcHHHHHHHHHHHHhhCCCCCCCCCcCcccchHHHHHHHHHHHhhhhhhhcccchhhhhhhhHHHHHHHHH
Confidence 776431 11111110 111 1111110 11122
Q ss_pred HHHHHHhh------cCCCceEeccccCCcEEecCC----Ccceeecccccc
Q 003384 571 SVLIFLHS------CKPHSIVHGDLKPANILLDAN----FVSKLSDFGISR 611 (824)
Q Consensus 571 ~aL~~LH~------~~~~giiHrDLKp~NILld~~----~~vKL~DFGla~ 611 (824)
..+.+|-. ..+..++|+|+.|.|||++.+ +.++|+||+.|.
T Consensus 162 ~~~~~l~~~~~~~~~~~~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~ 212 (302)
T cd05156 162 KYLRFLLESTSEESGSPVVFCHNDLQEGNILLLNPSSETKKLVLIDFEYAS 212 (302)
T ss_pred HHHHHHHhhccCCCCCCceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCC
Confidence 22334432 134679999999999999985 889999999764
No 489
>PRK15005 universal stress protein F; Provisional
Probab=97.13 E-value=0.0022 Score=61.59 Aligned_cols=81 Identities=16% Similarity=0.194 Sum_probs=62.3
Q ss_pred HHHHHHHHHHHHHHHHHhhcCeeeEEEEeecCchHHHHHHHHHHcCCCEEEeccCcCccchhhhcccchhhHHhhhccCC
Q 003384 45 IERQDMHNHLDMCLLICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVRQQAP 124 (824)
Q Consensus 45 ~e~~~~~~~l~~~~~~C~~~~V~~~~~~ie~~dv~~~i~e~i~~~~i~~LV~Ga~~~~~~~~~~~~~~s~~a~~v~~~a~ 124 (824)
..++...+.|..+...+...+++++..+.+ +++++.|++++.+++++.+|||++ .++..+. +-...+..|++++|
T Consensus 63 ~~~~~~~~~l~~~~~~~~~~~~~~~~~v~~-G~p~~~I~~~a~~~~~DLIV~Gs~-~~~~~~~---llGS~a~~vl~~a~ 137 (144)
T PRK15005 63 DLKAEAKSQLEEIIKKFKLPTDRVHVHVEE-GSPKDRILELAKKIPADMIIIASH-RPDITTY---LLGSNAAAVVRHAE 137 (144)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCceEEEEeC-CCHHHHHHHHHHHcCCCEEEEeCC-CCCchhe---eecchHHHHHHhCC
Confidence 344555677778877777788888877766 899999999999999999999988 3333222 22346789999987
Q ss_pred CccEEEEE
Q 003384 125 ASCHIWFI 132 (824)
Q Consensus 125 ~~C~v~~i 132 (824)
|.|++|
T Consensus 138 --cpVlvV 143 (144)
T PRK15005 138 --CSVLVV 143 (144)
T ss_pred --CCEEEe
Confidence 999987
No 490
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=96.93 E-value=0.0068 Score=62.27 Aligned_cols=126 Identities=24% Similarity=0.272 Sum_probs=83.6
Q ss_pred ccceeeecCceEEEEEEEC-CeEEEEEEecCCC----------------CCCchhHHHHHHHHHhcC------CCceeeE
Q 003384 468 PSLKIGEGGYGSIYKGLLR-HMQVAIKMLHPHS----------------LQGPSEFQQEIDILSKIR------HPNLVTL 524 (824)
Q Consensus 468 ~~~~LG~G~fG~Vykg~~~-~~~VAvK~l~~~~----------------~~~~~~f~~Ei~iL~~l~------HpnIv~L 524 (824)
....||+|+.=.||. +. +....||+..+.. ....+++.+|+.-...+. +.+|.++
T Consensus 5 ~~~~i~~G~~R~cy~--HP~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~ 82 (199)
T PF10707_consen 5 ESDLIAQGGERDCYQ--HPDDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRF 82 (199)
T ss_pred CCcccccCCCceEEE--CCCCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccE
Confidence 345799999999994 33 3557889887655 122356778888777766 7889999
Q ss_pred ecccCC--ceEEEEEecCC------CChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceEeccccCCcEEe
Q 003384 525 VGACPE--VWTLVYEYLPN------GSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPHSIVHGDLKPANILL 596 (824)
Q Consensus 525 ~g~~~~--~~~LV~Ey~~g------gsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~giiHrDLKp~NILl 596 (824)
+|.... +..+|+|.+.+ .+|.+++.. ..++. ..... +-.-..||-. +.|+.+||+|.||++
T Consensus 83 ~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~----~~~~~-~~~~~---L~~f~~~l~~---~~Iv~~dl~~~NIv~ 151 (199)
T PF10707_consen 83 YGFVETNLGLGLVVELIRDADGNISPTLEDYLKE----GGLTE-ELRQA---LDEFKRYLLD---HHIVIRDLNPHNIVV 151 (199)
T ss_pred eEEEecCCceEEEEEEEECCCCCcCccHHHHHHc----CCccH-HHHHH---HHHHHHHHHH---cCCeecCCCcccEEE
Confidence 998743 56788888643 257777732 23443 33333 3334445555 679999999999999
Q ss_pred cCC--C--cceeec
Q 003384 597 DAN--F--VSKLSD 606 (824)
Q Consensus 597 d~~--~--~vKL~D 606 (824)
..+ + .+.|+|
T Consensus 152 ~~~~~~~~~lvlID 165 (199)
T PF10707_consen 152 QRRDSGEFRLVLID 165 (199)
T ss_pred EecCCCceEEEEEe
Confidence 643 2 455665
No 491
>PRK11175 universal stress protein UspE; Provisional
Probab=96.82 E-value=0.0073 Score=65.92 Aligned_cols=94 Identities=11% Similarity=0.055 Sum_probs=71.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCeeeEEEEeecCchHHHHHHHHHHcCCCEEEeccCcCccchhhhcccchhh
Q 003384 36 EEKVQAYREIERQDMHNHLDMCLLICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKK 115 (824)
Q Consensus 36 ~e~v~~~~~~e~~~~~~~l~~~~~~C~~~~V~~~~~~ie~~dv~~~i~e~i~~~~i~~LV~Ga~~~~~~~~~~~~~~s~~ 115 (824)
.+..+.++++..++.++.|+.+...|...+++++..++..+++.++|++++..++++.+|||++.. +...+-+-...
T Consensus 53 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~g~~~~~i~~~a~~~~~DLiV~G~~~~---~~~~~~~~gs~ 129 (305)
T PRK11175 53 PDEREAMRQGVISQRTAWIREQAKPYLDAGIPIEIKVVWHNRPFEAIIQEVIAGGHDLVVKMTHQH---DKLESVIFTPT 129 (305)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEecCCCcHHHHHHHHHhcCCCEEEEeCCCC---cHHHhhccChh
Confidence 333444555555567788999999999999999998887799999999999999999999999933 33332222335
Q ss_pred HHhhhccCCCccEEEEEec
Q 003384 116 AISVRQQAPASCHIWFICN 134 (824)
Q Consensus 116 a~~v~~~a~~~C~v~~i~~ 134 (824)
+..|+..+| |-|++|-.
T Consensus 130 ~~~l~~~~~--~pvlvv~~ 146 (305)
T PRK11175 130 DWHLLRKCP--CPVLMVKD 146 (305)
T ss_pred HHHHHhcCC--CCEEEecc
Confidence 667888876 99999943
No 492
>PLN02236 choline kinase
Probab=96.82 E-value=0.0066 Score=67.86 Aligned_cols=138 Identities=16% Similarity=0.184 Sum_probs=80.9
Q ss_pred eeeecCceEEEEEEEC------CeEEEEEEecCCCCCCchhHHHHHHHHHhcCCCce-eeEecccCCceEEEEEecCCCC
Q 003384 471 KIGEGGYGSIYKGLLR------HMQVAIKMLHPHSLQGPSEFQQEIDILSKIRHPNL-VTLVGACPEVWTLVYEYLPNGS 543 (824)
Q Consensus 471 ~LG~G~fG~Vykg~~~------~~~VAvK~l~~~~~~~~~~f~~Ei~iL~~l~HpnI-v~L~g~~~~~~~LV~Ey~~ggs 543 (824)
.|-.|-.-.+|+..+. +..|++|+.........+ -.+|..++..+..-++ .++++.+... .|++|+++.+
T Consensus 43 ~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t~~~id-R~~E~~~~~~l~~~gl~P~~~~~~~~g--~v~efi~g~~ 119 (344)
T PLN02236 43 PLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGVELFFD-RDDEIRTFECMSRHGQGPRLLGRFPNG--RVEEFIHART 119 (344)
T ss_pred EcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCCCeeec-hHHHHHHHHHHHHcCCCCceEEEECCc--eEEEeeCCCC
Confidence 4545667789987653 257899987654322222 3679999988854333 3456666544 6899998877
Q ss_pred hhhh-----------------hhccCC-C-C-CCCHHHHHHHHHH-----------------HHHHHHHH----hh-cCC
Q 003384 544 LEDR-----------------LSCKDN-S-P-PLSWQTRIRIATE-----------------LCSVLIFL----HS-CKP 581 (824)
Q Consensus 544 L~~~-----------------L~~~~~-~-~-~l~~~~~~~ia~q-----------------ia~aL~~L----H~-~~~ 581 (824)
|... |+.... . . +..+.....+..+ +...+..| .. ..+
T Consensus 120 l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~L~~~~~~~~~~ 199 (344)
T PLN02236 120 LSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLEDEINLLEKELSGDDQE 199 (344)
T ss_pred CCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHHHHHHHHHHHhcccCCC
Confidence 6421 111110 0 1 1122333233211 11112222 21 223
Q ss_pred CceEeccccCCcEEecC-CCcceeecccccc
Q 003384 582 HSIVHGDLKPANILLDA-NFVSKLSDFGISR 611 (824)
Q Consensus 582 ~giiHrDLKp~NILld~-~~~vKL~DFGla~ 611 (824)
..++|+|+++.|||+++ ++.+.|+||..|.
T Consensus 200 ~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~ 230 (344)
T PLN02236 200 IGFCHNDLQYGNIMIDEETRAITIIDYEYAS 230 (344)
T ss_pred ceEEeCCCCcCcEEEeCCCCcEEEEeehhcc
Confidence 57899999999999986 4789999999765
No 493
>PRK10116 universal stress protein UspC; Provisional
Probab=96.78 E-value=0.0091 Score=57.23 Aligned_cols=86 Identities=13% Similarity=0.191 Sum_probs=64.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCeeeEEEEeecCchHHHHHHHHHHcCCCEEEeccCcCccchhhhcccchhhH
Q 003384 37 EKVQAYREIERQDMHNHLDMCLLICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKA 116 (824)
Q Consensus 37 e~v~~~~~~e~~~~~~~l~~~~~~C~~~~V~~~~~~ie~~dv~~~i~e~i~~~~i~~LV~Ga~~~~~~~~~~~~~~s~~a 116 (824)
...+.+++..++...+.|..+ +.+.++..+...++.+++.++|++++.+.+++.+|||++.+.+..+.. | .|
T Consensus 52 ~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~G~~~~~I~~~a~~~~~DLiV~g~~~~~~~~~~~----s-~a 123 (142)
T PRK10116 52 PMLEDLRSVMQEETQSFLDKL---IQDADYPIEKTFIAYGELSEHILEVCRKHHFDLVICGNHNHSFFSRAS----C-SA 123 (142)
T ss_pred HHHHHHHHHHHHHHHHHHHHH---HHhcCCCeEEEEEecCCHHHHHHHHHHHhCCCEEEEcCCcchHHHHHH----H-HH
Confidence 344556666666666666655 456788877778888999999999999999999999999544443332 3 47
Q ss_pred HhhhccCCCccEEEEE
Q 003384 117 ISVRQQAPASCHIWFI 132 (824)
Q Consensus 117 ~~v~~~a~~~C~v~~i 132 (824)
..|+..+ -|.|.+|
T Consensus 124 ~~v~~~~--~~pVLvv 137 (142)
T PRK10116 124 KRVIASS--EVDVLLV 137 (142)
T ss_pred HHHHhcC--CCCEEEE
Confidence 7888884 5999987
No 494
>PLN02756 S-methyl-5-thioribose kinase
Probab=96.74 E-value=0.018 Score=65.34 Aligned_cols=79 Identities=14% Similarity=0.053 Sum_probs=57.0
Q ss_pred cceeeecCceEEEEEEECCeEEEEEEecCCCC-------CCchhHHHHHHHHHhcC---CCceeeEecccCCceEEEEEe
Q 003384 469 SLKIGEGGYGSIYKGLLRHMQVAIKMLHPHSL-------QGPSEFQQEIDILSKIR---HPNLVTLVGACPEVWTLVYEY 538 (824)
Q Consensus 469 ~~~LG~G~fG~Vykg~~~~~~VAvK~l~~~~~-------~~~~~f~~Ei~iL~~l~---HpnIv~L~g~~~~~~~LV~Ey 538 (824)
.+.||.|....||+....+..|+||.-.+... .+...-..|...|+.+. ..++.+++.+|.+..++||||
T Consensus 37 ~~eiggGn~N~VyrV~~~~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~ded~~vlvME~ 116 (418)
T PLN02756 37 IKEVGDGNLNFVYIVVSSSGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFDRTMALIGMRY 116 (418)
T ss_pred EEEcCCCceeeEEEEEcCCccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEECCCCCEEEEee
Confidence 45689999999999887777799997542111 13345556677777664 357888999999989999999
Q ss_pred cCC--CChhhh
Q 003384 539 LPN--GSLEDR 547 (824)
Q Consensus 539 ~~g--gsL~~~ 547 (824)
+++ ..+.+.
T Consensus 117 L~~~~~ilr~~ 127 (418)
T PLN02756 117 LEPPHIILRKG 127 (418)
T ss_pred cCCcceehhhh
Confidence 977 345443
No 495
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=96.65 E-value=0.0047 Score=76.27 Aligned_cols=188 Identities=24% Similarity=0.241 Sum_probs=126.9
Q ss_pred HHHHHHHHhcCCCceeeEecccCCc------eEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcC
Q 003384 507 QQEIDILSKIRHPNLVTLVGACPEV------WTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCK 580 (824)
Q Consensus 507 ~~Ei~iL~~l~HpnIv~L~g~~~~~------~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~ 580 (824)
..|...+.++.|+|++.++++.-+. ..+..+||..-++...+. .-..++..+.+.+..++.+||.|+|..
T Consensus 230 E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q---~v~~i~~~~~r~~~~~~~~GL~~~h~~- 305 (1351)
T KOG1035|consen 230 EIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQ---SVGSIPLETLRILHQKLLEGLAYLHSL- 305 (1351)
T ss_pred HHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHh---hccccCHHHHHHHHHHHhhhHHHHHHh-
Confidence 4577778888999999998876321 123457888888888884 445677888888999999999999994
Q ss_pred CCceEeccccCC---cEEecCCCcceee--ccccccccccccccCCCccccccCCCCCCcccCChhhhccCCCCcc--hh
Q 003384 581 PHSIVHGDLKPA---NILLDANFVSKLS--DFGISRFLSQNEISSNNTTLCCRTDPKGTFAYMDPEFLASGELTPK--SD 653 (824)
Q Consensus 581 ~~giiHrDLKp~---NILld~~~~vKL~--DFGla~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~k--sD 653 (824)
...|.-|..+ +...+..+.+.++ ||+.+..+........ ..-+..|.+||......++.+ .|
T Consensus 306 --~l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~~~~---------~~~~~~~~~~e~~~~~~~~~~r~~d 374 (1351)
T KOG1035|consen 306 --SLEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEKSFS---------DLLAEIRNADEDLKENTAKKSRLTD 374 (1351)
T ss_pred --ccceeEEecccccccccCccceeecchhhhcccccCCCcccchh---------hcCccccccccccccccchhhhhhH
Confidence 3444444444 4445566677776 8888876655443221 123556778887766655544 69
Q ss_pred HHhHHHHHHHHHhCCCCCCCchHHHHHHhhhccccccCCCCCCCChhhHHHHHHHHHHHhhhccCCCCChHH
Q 003384 654 VYSFGIILLRLLTGRPALGITKEVQYALDTGKLKNLLDPLAGDWPFVQAEQLANLAMRCCEMSRKSRPELGK 725 (824)
Q Consensus 654 VwSlGvvL~ELltG~~Pf~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~~P~~RPt~~~ 725 (824)
+|.+|..+..+..|..+-...... ..+++. .....+.+....|+..++++|+...+
T Consensus 375 L~~lgll~~~~~~~~~i~~~~~~~---------~~~l~~-------~~~~~~~d~~~~~~~~~~~~Rl~~~~ 430 (1351)
T KOG1035|consen 375 LWCLGLLLLQLSQGEDISEKSAVP---------VSLLDV-------LSTSELLDALPKCLDEDSEERLSALE 430 (1351)
T ss_pred HHHHHHHHhhhhhcCcccccccch---------hhhhcc-------ccchhhhhhhhhhcchhhhhccchhh
Confidence 999999999999987554221111 111111 11115677888999999999999843
No 496
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=96.54 E-value=0.019 Score=64.07 Aligned_cols=78 Identities=15% Similarity=0.114 Sum_probs=54.2
Q ss_pred eeeecCceEEEEEEECC--eEEEEEEecCC-------CCCCchhHHHHHHHHHhcC--CC-ceeeEecccCCceEEEEEe
Q 003384 471 KIGEGGYGSIYKGLLRH--MQVAIKMLHPH-------SLQGPSEFQQEIDILSKIR--HP-NLVTLVGACPEVWTLVYEY 538 (824)
Q Consensus 471 ~LG~G~fG~Vykg~~~~--~~VAvK~l~~~-------~~~~~~~f~~Ei~iL~~l~--Hp-nIv~L~g~~~~~~~LV~Ey 538 (824)
.||.|....||++...+ +.|+||.-.+. ...+.++..-|...|+... -| .+.++|.+-++...+|||+
T Consensus 2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~~D~e~~~~vMEd 81 (370)
T TIGR01767 2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFHFDTEMAVTVMED 81 (370)
T ss_pred cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEEEccccceehHhh
Confidence 47999999999998764 57999964321 1233456778888887764 34 4666777777778899999
Q ss_pred cCCC-Chhhhh
Q 003384 539 LPNG-SLEDRL 548 (824)
Q Consensus 539 ~~gg-sL~~~L 548 (824)
++.. .|.+.|
T Consensus 82 L~~~~ilR~~L 92 (370)
T TIGR01767 82 LSHHKIARKGL 92 (370)
T ss_pred CccchHHHHHH
Confidence 9543 344433
No 497
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=96.52 E-value=0.019 Score=63.18 Aligned_cols=132 Identities=19% Similarity=0.352 Sum_probs=79.0
Q ss_pred ecCce-EEEEEEECCeEEEEEEecC--CCCCCchhHHHHHHHHHhcCC--CceeeEecccCCce----EEEEEecCCCCh
Q 003384 474 EGGYG-SIYKGLLRHMQVAIKMLHP--HSLQGPSEFQQEIDILSKIRH--PNLVTLVGACPEVW----TLVYEYLPNGSL 544 (824)
Q Consensus 474 ~G~fG-~Vykg~~~~~~VAvK~l~~--~~~~~~~~f~~Ei~iL~~l~H--pnIv~L~g~~~~~~----~LV~Ey~~ggsL 544 (824)
.||+. .+|.....++.+++. ... ..........+|..+|+.+.- .-+...+++|.+.. +.||+|+.|..+
T Consensus 34 ~~G~sn~t~~~~~~~~~~vlR-~P~~~~~~~~~~~~~re~~~i~~l~~~~vP~p~~~~~~~~~~~g~pf~v~~~veGe~~ 112 (321)
T COG3173 34 SGGWSNDTFRLGDTGQKYVLR-KPPRGDPVESAHDEKREYRVIAALLDVDVPVPRAFGLCGEGYLGTPFYVMEWVEGEVV 112 (321)
T ss_pred cCCcccceEEEecCCceEEEe-cCCccccchhhhHHHhHHHHHHHhcCCCCCCcccccccccCCCCCceEEEEEecceec
Confidence 34443 344444446677777 221 122223456788888888753 23455678886655 899999998544
Q ss_pred hhhhhccCCCCCCCHHHHHHHH-HHHHHHHHHHh----------------------------------------------
Q 003384 545 EDRLSCKDNSPPLSWQTRIRIA-TELCSVLIFLH---------------------------------------------- 577 (824)
Q Consensus 545 ~~~L~~~~~~~~l~~~~~~~ia-~qia~aL~~LH---------------------------------------------- 577 (824)
.+.+.. .+.. .+++ ..++..|+-||
T Consensus 113 ~~~~~~------~~~~--~~~~~~~l~~~La~LH~ida~~~~~~g~~~~~~~rql~~~~~~~~~~~~~~~~~~p~~~~~~ 184 (321)
T COG3173 113 WSALPP------ESLG--RQFALDALADFLAELHSIDAAGLPDPGKPNAYRGRQLARWDDEYRRAKKELGGRIPLADRLI 184 (321)
T ss_pred cCcCCc------ccch--HHHHHHHHHHHHHHHhCCCCcCCCCCCccCccccchhhHHHHHHHHHHHhccCCCchHHHHH
Confidence 333310 0000 0111 13333333333
Q ss_pred ----hcC-----CCceEeccccCCcEEecCCCcceeeccccccccc
Q 003384 578 ----SCK-----PHSIVHGDLKPANILLDANFVSKLSDFGISRFLS 614 (824)
Q Consensus 578 ----~~~-----~~giiHrDLKp~NILld~~~~vKL~DFGla~~~~ 614 (824)
... +..++|+|+.+.||+++.++.+=|.||+++.+-.
T Consensus 185 ~Wl~~~~p~~~~~~~lvHGD~~~gNlii~~~~~~gVlDwe~~~lGD 230 (321)
T COG3173 185 KWLEANRPPWAGPPVLVHGDYRPGNLIIDPGRPTGVLDWELATLGD 230 (321)
T ss_pred HHHHhcCCCcCCCceeeeCCcccCCEEEeCCCeeEEEeccccccCC
Confidence 311 2468999999999999999889999999987543
No 498
>PF11789 zf-Nse: Zinc-finger of the MIZ type in Nse subunit; PDB: 2YU4_A 3HTK_C.
Probab=96.46 E-value=0.0011 Score=53.71 Aligned_cols=43 Identities=28% Similarity=0.597 Sum_probs=30.9
Q ss_pred CCcccchhhhccCCccc-cCCccchhhhhhhhh-cCCCCCCCCCC
Q 003384 757 YFTCPIFQEVMQDPHVA-ADGFTYEAEALKGWL-DSGHETSPMTN 799 (824)
Q Consensus 757 ~f~cPi~~evm~dPvi~-~~g~tye~~~i~~wl-~~~~~t~p~t~ 799 (824)
.+.|||+...+.|||.. .-|++|++++|.+|| +.+...||+++
T Consensus 11 ~~~CPiT~~~~~~PV~s~~C~H~fek~aI~~~i~~~~~~~CPv~G 55 (57)
T PF11789_consen 11 SLKCPITLQPFEDPVKSKKCGHTFEKEAILQYIQRNGSKRCPVAG 55 (57)
T ss_dssp -SB-TTTSSB-SSEEEESSS--EEEHHHHHHHCTTTS-EE-SCCC
T ss_pred ccCCCCcCChhhCCcCcCCCCCeecHHHHHHHHHhcCCCCCCCCC
Confidence 47899999999999997 449999999999999 44556798865
No 499
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=96.26 E-value=0.003 Score=68.32 Aligned_cols=148 Identities=15% Similarity=0.191 Sum_probs=95.0
Q ss_pred cCCCChhhHhhhcC---CCCccceeeecCceEEEEEEEC-CeEEEEEEecCC--CCC----------------C----ch
Q 003384 451 FSDFSFSEIEGATH---NFDPSLKIGEGGYGSIYKGLLR-HMQVAIKMLHPH--SLQ----------------G----PS 504 (824)
Q Consensus 451 ~~~~~~~ei~~~~~---~f~~~~~LG~G~fG~Vykg~~~-~~~VAvK~l~~~--~~~----------------~----~~ 504 (824)
+.-|.+--|+...+ -+..+..||-|--+.||.+-+. |++.++|.-... +.. + .-
T Consensus 76 y~GyDyLAlktL~~R~~v~svGnqIGVGKESDIY~v~d~~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRl 155 (465)
T KOG2268|consen 76 YAGYDYLALKTLSNRGSVESVGNQIGVGKESDIYVVADEEGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRL 155 (465)
T ss_pred eccchHHHHHHHHhcchhhhhccccccccccceEEEecCCCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHH
Confidence 34445544443333 3677889999999999999887 788888853211 000 0 01
Q ss_pred hHHHHHHHHHhcCCC--ceeeEecccCCceEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCC
Q 003384 505 EFQQEIDILSKIRHP--NLVTLVGACPEVWTLVYEYLPNGSLEDRLSCKDNSPPLSWQTRIRIATELCSVLIFLHSCKPH 582 (824)
Q Consensus 505 ~f~~Ei~iL~~l~Hp--nIv~L~g~~~~~~~LV~Ey~~ggsL~~~L~~~~~~~~l~~~~~~~ia~qia~aL~~LH~~~~~ 582 (824)
...+|...|+.|... -+.+.+++ ...++|||++.|-.|...-+- .+..+ +...+...+--|-. +
T Consensus 156 aa~kEfafmkaL~e~gfpVPkpiD~--~RH~Vvmelv~g~Pl~~v~~v------~d~~~---ly~~lm~~Iv~la~---~ 221 (465)
T KOG2268|consen 156 AATKEFAFMKALYERGFPVPKPIDH--NRHCVVMELVDGYPLRQVRHV------EDPPT---LYDDLMGLIVRLAN---H 221 (465)
T ss_pred HHHHHHHHHHHHHHcCCCCCCcccc--cceeeHHHhhcccceeeeeec------CChHH---HHHHHHHHHHHHHH---c
Confidence 134688888887431 13333443 346789999998887654321 11122 33334444444545 8
Q ss_pred ceEeccccCCcEEecCCCcceeeccccccc
Q 003384 583 SIVHGDLKPANILLDANFVSKLSDFGISRF 612 (824)
Q Consensus 583 giiHrDLKp~NILld~~~~vKL~DFGla~~ 612 (824)
|+||+|..-=||+++.++.++++||--+..
T Consensus 222 GlIHgDFNEFNimv~dd~~i~vIDFPQmvS 251 (465)
T KOG2268|consen 222 GLIHGDFNEFNIMVKDDDKIVVIDFPQMVS 251 (465)
T ss_pred CceecccchheeEEecCCCEEEeechHhhc
Confidence 999999999999999999999999986653
No 500
>PRK11175 universal stress protein UspE; Provisional
Probab=96.14 E-value=0.017 Score=62.97 Aligned_cols=84 Identities=17% Similarity=0.242 Sum_probs=59.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCeeeEEEEeecCchHHHHHHHHHHcCCCEEEeccCcCccchhhhcccchhhHHhhhc
Q 003384 42 YREIERQDMHNHLDMCLLICRQMGVRAEKLDTESESTEKGILELISHYGIRKLVMGAAADKHYKKKMMDLKSKKAISVRQ 121 (824)
Q Consensus 42 ~~~~e~~~~~~~l~~~~~~C~~~~V~~~~~~ie~~dv~~~i~e~i~~~~i~~LV~Ga~~~~~~~~~~~~~~s~~a~~v~~ 121 (824)
|.+..+....+.|.++.. ..++..+...+..++++++|++++..++++.||||++.++...+. +-...|..|+.
T Consensus 216 ~~~~~~~~~~~~l~~~~~---~~~~~~~~~~v~~G~~~~~I~~~a~~~~~DLIVmG~~~~~~~~~~---llGS~a~~v~~ 289 (305)
T PRK11175 216 YNDAIRGQHLLAMKALRQ---KFGIDEEQTHVEEGLPEEVIPDLAEHLDAELVILGTVGRTGLSAA---FLGNTAEHVID 289 (305)
T ss_pred HHHHHHHHHHHHHHHHHH---HhCCChhheeeccCCHHHHHHHHHHHhCCCEEEECCCccCCCcce---eecchHHHHHh
Confidence 333333344445555543 447776666677799999999999999999999999944444333 33446779999
Q ss_pred cCCCccEEEEEe
Q 003384 122 QAPASCHIWFIC 133 (824)
Q Consensus 122 ~a~~~C~v~~i~ 133 (824)
.++ |.|.+|.
T Consensus 290 ~~~--~pVLvv~ 299 (305)
T PRK11175 290 HLN--CDLLAIK 299 (305)
T ss_pred cCC--CCEEEEc
Confidence 987 9999983
Done!