Query 003385
Match_columns 824
No_of_seqs 634 out of 4172
Neff 7.9
Searched_HMMs 29240
Date Mon Mar 25 23:24:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003385.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/003385hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4aw0_A HPDK1, 3-phosphoinositi 100.0 6.4E-45 2.2E-49 392.8 16.6 208 603-817 34-246 (311)
2 4fih_A Serine/threonine-protei 100.0 2.1E-44 7.1E-49 394.5 18.6 199 603-810 76-275 (346)
3 4asz_A BDNF/NT-3 growth factor 100.0 1.7E-44 5.7E-49 389.6 14.5 207 602-811 14-237 (299)
4 4b9d_A Serine/threonine-protei 100.0 2.8E-44 9.5E-49 394.1 15.1 207 602-814 25-234 (350)
5 4fie_A Serine/threonine-protei 100.0 1.8E-43 6.1E-48 396.4 19.9 198 603-809 153-351 (423)
6 4aoj_A High affinity nerve gro 100.0 1.4E-43 4.7E-48 387.7 18.4 205 604-811 44-267 (329)
7 4gt4_A Tyrosine-protein kinase 100.0 5E-44 1.7E-48 387.5 13.5 205 603-810 28-253 (308)
8 4g3f_A NF-kappa-beta-inducing 100.0 2.7E-43 9.3E-48 384.5 18.3 203 603-817 60-268 (336)
9 3ubd_A Ribosomal protein S6 ki 100.0 1E-43 3.4E-48 383.2 12.0 206 603-816 26-237 (304)
10 3hyh_A Carbon catabolite-derep 100.0 7.4E-43 2.5E-47 371.4 16.7 203 602-814 14-221 (275)
11 3omv_A RAF proto-oncogene seri 100.0 1.1E-42 3.6E-47 376.0 17.7 198 603-809 38-241 (307)
12 3fpq_A Serine/threonine-protei 100.0 1.3E-42 4.5E-47 372.5 18.3 196 604-808 29-232 (290)
13 4ase_A Vascular endothelial gr 100.0 1.2E-41 4.2E-46 375.3 13.1 212 597-811 60-294 (353)
14 4g31_A Eukaryotic translation 100.0 1.9E-40 6.3E-45 358.4 18.6 198 603-807 7-229 (299)
15 3hmm_A TGF-beta receptor type- 100.0 6.5E-41 2.2E-45 363.1 14.5 197 603-806 5-219 (303)
16 4b99_A Mitogen-activated prote 100.0 8.7E-40 3E-44 366.5 18.4 210 602-819 55-277 (398)
17 4f9c_A Cell division cycle 7-r 100.0 1.2E-38 4.1E-43 353.2 19.6 196 602-809 22-251 (361)
18 3v5w_A G-protein coupled recep 100.0 1.2E-38 4.2E-43 372.8 18.2 197 603-809 191-395 (689)
19 3uto_A Twitchin; kinase, muscl 100.0 1.7E-38 5.7E-43 372.8 18.8 208 602-817 158-368 (573)
20 4aw2_A Serine/threonine-protei 100.0 3.3E-36 1.1E-40 342.3 17.5 211 603-819 76-295 (437)
21 3v8s_A RHO-associated protein 100.0 3.5E-36 1.2E-40 339.5 16.4 209 603-819 71-287 (410)
22 3zgw_A Maternal embryonic leuc 100.0 6.2E-36 2.1E-40 330.2 17.7 203 602-811 11-216 (347)
23 3fxz_A Serine/threonine-protei 100.0 1.4E-35 4.6E-40 320.3 18.8 199 602-809 21-220 (297)
24 1o6l_A RAC-beta serine/threoni 100.0 1.4E-35 4.9E-40 326.1 17.9 199 603-809 7-209 (337)
25 3fe3_A MAP/microtubule affinit 100.0 1.4E-35 4.9E-40 325.0 17.7 200 603-811 17-220 (328)
26 2vd5_A DMPK protein; serine/th 100.0 1.1E-35 3.6E-40 335.7 17.0 211 603-819 63-284 (412)
27 3txo_A PKC-L, NPKC-ETA, protei 100.0 8.1E-36 2.8E-40 330.2 15.3 205 602-814 24-233 (353)
28 2qkw_B Protein kinase; three-h 100.0 2.4E-35 8.3E-40 321.4 18.5 204 603-809 41-245 (321)
29 3uim_A Brassinosteroid insensi 100.0 1.8E-35 6.1E-40 322.8 15.6 214 593-806 20-236 (326)
30 3s95_A LIMK-1, LIM domain kina 100.0 9.8E-35 3.3E-39 314.8 21.3 200 602-807 11-224 (310)
31 4eqm_A Protein kinase; transfe 100.0 3.1E-35 1.1E-39 316.8 17.2 202 601-809 11-216 (294)
32 1fot_A TPK1 delta, CAMP-depend 100.0 3.1E-35 1.1E-39 320.9 17.4 198 603-811 8-209 (318)
33 2yab_A Death-associated protei 100.0 7.1E-35 2.4E-39 323.6 20.1 201 602-811 13-224 (361)
34 2c30_A Serine/threonine-protei 100.0 1.3E-34 4.3E-39 316.3 21.2 196 605-809 49-245 (321)
35 1xjd_A Protein kinase C, theta 100.0 3.9E-35 1.3E-39 323.7 17.0 202 602-811 18-224 (345)
36 3c0i_A Peripheral plasma membr 100.0 6.1E-35 2.1E-39 322.9 18.4 206 599-808 22-236 (351)
37 3a62_A Ribosomal protein S6 ki 100.0 7.3E-35 2.5E-39 319.0 17.8 201 602-810 18-226 (327)
38 2i0e_A Protein kinase C-beta I 100.0 5.4E-35 1.8E-39 323.6 16.2 204 602-813 21-229 (353)
39 4dc2_A Protein kinase C IOTA t 100.0 1.1E-34 3.7E-39 325.7 18.8 198 602-807 53-255 (396)
40 2y0a_A Death-associated protei 100.0 3E-34 1E-38 314.0 21.5 201 600-809 10-221 (326)
41 3a8x_A Protein kinase C IOTA t 100.0 1.3E-34 4.3E-39 319.7 18.5 197 603-807 11-212 (345)
42 1rdq_E PKA C-alpha, CAMP-depen 100.0 8.2E-35 2.8E-39 321.8 16.7 198 603-811 43-244 (350)
43 3niz_A Rhodanese family protei 100.0 2.6E-34 8.7E-39 312.3 20.1 210 602-819 22-234 (311)
44 2bdw_A Hypothetical protein K1 100.0 2.2E-34 7.5E-39 319.9 19.8 202 599-809 27-234 (362)
45 2r5t_A Serine/threonine-protei 100.0 9.3E-35 3.2E-39 324.0 16.5 208 602-817 39-251 (373)
46 1tki_A Titin; serine kinase, m 100.0 1.8E-34 6.3E-39 315.1 18.2 199 602-809 6-207 (321)
47 4hcu_A Tyrosine-protein kinase 100.0 9.3E-35 3.2E-39 308.2 15.3 201 602-809 11-212 (269)
48 2psq_A Fibroblast growth facto 100.0 1.9E-34 6.4E-39 321.4 18.2 208 601-811 81-312 (370)
49 3sxs_A Cytoplasmic tyrosine-pr 100.0 9.3E-35 3.2E-39 307.9 14.9 202 601-809 8-210 (268)
50 3p86_A Serine/threonine-protei 100.0 1.4E-34 4.6E-39 314.4 16.2 204 600-809 36-243 (309)
51 2pmi_A Negative RE, cyclin-dep 100.0 4.7E-34 1.6E-38 311.0 20.5 212 602-818 6-222 (317)
52 3soa_A Calcium/calmodulin-depe 100.0 2.4E-34 8.2E-39 327.9 18.5 202 600-809 10-217 (444)
53 3kul_A Ephrin type-A receptor 100.0 8.2E-35 2.8E-39 318.3 13.6 206 598-809 46-259 (325)
54 3c4z_A Rhodopsin kinase; Ser/T 100.0 4E-34 1.4E-38 332.5 19.9 202 604-809 188-393 (543)
55 3gen_A Tyrosine-protein kinase 100.0 1.1E-34 3.7E-39 309.9 13.9 203 600-809 23-226 (283)
56 4fr4_A YANK1, serine/threonine 100.0 3.2E-34 1.1E-38 320.7 18.0 198 602-808 16-220 (384)
57 3tki_A Serine/threonine-protei 100.0 2.9E-34 9.8E-39 313.8 17.3 200 603-809 9-212 (323)
58 1ob3_A PFPK5, cell division co 100.0 3.4E-34 1.2E-38 307.4 17.3 207 603-817 4-213 (288)
59 3e7e_A HBUB1, BUB1A, mitotic c 100.0 2.5E-34 8.7E-39 319.3 16.8 201 601-807 65-287 (365)
60 3h4j_B AMPK kdaid, SNF1-like p 100.0 2.5E-34 8.7E-39 316.0 16.2 199 602-810 10-213 (336)
61 2x4f_A Myosin light chain kina 100.0 5.8E-34 2E-38 317.8 19.1 197 606-810 94-293 (373)
62 2zv2_A Calcium/calmodulin-depe 100.0 5.1E-34 1.7E-38 307.4 17.8 199 602-809 14-244 (298)
63 1kob_A Twitchin; kinase, intra 100.0 6.7E-34 2.3E-38 318.6 19.4 200 602-809 52-254 (387)
64 4ejn_A RAC-alpha serine/threon 100.0 1.7E-34 5.8E-39 329.7 14.4 200 602-809 149-353 (446)
65 2izr_A Casein kinase I isoform 100.0 7.8E-34 2.7E-38 310.8 19.1 199 602-809 10-221 (330)
66 4euu_A Serine/threonine-protei 100.0 1.1E-33 3.7E-38 308.1 19.3 203 602-810 10-228 (319)
67 3uc3_A Serine/threonine-protei 100.0 5.7E-34 1.9E-38 316.4 17.2 201 602-812 21-225 (361)
68 3o0g_A Cell division protein k 100.0 1E-33 3.5E-38 304.1 18.2 199 603-809 4-207 (292)
69 3kn6_A Ribosomal protein S6 ki 100.0 1.2E-33 4.1E-38 309.2 18.9 192 607-809 17-213 (325)
70 2acx_A G protein-coupled recep 100.0 8.5E-34 2.9E-38 330.8 18.5 200 603-809 186-389 (576)
71 3f3z_A Calcium/calmodulin-depe 100.0 1.9E-33 6.3E-38 299.4 19.6 200 600-809 8-211 (277)
72 3hko_A Calcium/calmodulin-depe 100.0 6.7E-34 2.3E-38 312.7 16.5 207 600-809 25-280 (345)
73 3qd2_B Eukaryotic translation 100.0 1.4E-33 5E-38 307.4 19.0 202 601-806 6-277 (332)
74 3ork_A Serine/threonine protei 100.0 1.9E-34 6.4E-39 313.1 11.9 201 602-809 13-223 (311)
75 1vzo_A Ribosomal protein S6 ki 100.0 6.7E-34 2.3E-38 315.0 16.5 201 602-809 55-266 (355)
76 3oz6_A Mitogen-activated prote 100.0 8.4E-34 2.9E-38 317.9 17.0 209 601-818 9-244 (388)
77 1qcf_A Haematopoetic cell kina 100.0 4.2E-34 1.4E-38 327.3 14.4 202 601-809 188-390 (454)
78 3cbl_A C-FES, proto-oncogene t 100.0 4.6E-34 1.6E-38 319.0 13.9 202 602-809 115-320 (377)
79 2qr7_A Ribosomal protein S6 ki 100.0 1.4E-33 4.7E-38 311.0 17.4 196 600-807 21-222 (342)
80 3gni_B Strad alpha; kinase fol 100.0 1.9E-33 6.4E-38 315.1 18.8 205 602-811 26-243 (389)
81 2a2a_A Death-associated protei 100.0 2.7E-33 9.3E-38 305.3 19.5 201 600-809 11-222 (321)
82 3ttj_A Mitogen-activated prote 100.0 1E-33 3.5E-38 324.8 16.9 206 602-819 63-277 (464)
83 2y94_A 5'-AMP-activated protei 100.0 1.2E-33 4.1E-38 324.5 17.3 203 602-813 17-224 (476)
84 1rjb_A FL cytokine receptor; k 100.0 8E-34 2.7E-38 312.1 15.1 208 599-809 43-279 (344)
85 3g33_A Cell division protein k 100.0 1.7E-33 5.9E-38 304.7 17.3 216 596-819 4-233 (308)
86 2w4o_A Calcium/calmodulin-depe 100.0 1.7E-33 5.9E-38 311.0 17.2 197 602-809 54-254 (349)
87 3dls_A PAS domain-containing s 100.0 3.3E-33 1.1E-37 307.0 19.2 199 600-807 23-232 (335)
88 3pfq_A PKC-B, PKC-beta, protei 100.0 1.7E-33 6E-38 336.9 18.4 207 602-816 342-553 (674)
89 1luf_A Muscle-specific tyrosin 100.0 8.2E-34 2.8E-38 311.5 14.3 206 601-809 47-281 (343)
90 3is5_A Calcium-dependent prote 100.0 2.3E-33 7.9E-38 300.6 17.2 203 601-809 22-229 (285)
91 3t9t_A Tyrosine-protein kinase 100.0 9.8E-34 3.4E-38 299.4 14.2 201 602-809 9-210 (267)
92 3tt0_A Basic fibroblast growth 100.0 1.9E-33 6.5E-38 314.5 17.2 209 598-809 66-298 (382)
93 3ugc_A Tyrosine-protein kinase 100.0 7.5E-34 2.6E-38 305.5 13.3 202 600-807 9-219 (295)
94 1opk_A P150, C-ABL, proto-onco 100.0 1.1E-33 3.8E-38 327.3 15.7 202 602-809 221-424 (495)
95 2ivs_A Proto-oncogene tyrosine 100.0 1.4E-33 5E-38 305.4 15.6 207 600-809 22-257 (314)
96 3l9p_A Anaplastic lymphoma kin 100.0 5.9E-34 2E-38 317.0 12.6 207 600-809 70-291 (367)
97 3llt_A Serine/threonine kinase 100.0 1.8E-33 6.1E-38 311.5 16.4 210 594-814 28-268 (360)
98 2qol_A Ephrin receptor; recept 100.0 9.6E-34 3.3E-38 316.0 14.1 203 601-809 45-255 (373)
99 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 1.1E-33 3.6E-38 323.8 14.5 202 601-809 184-386 (452)
100 2nru_A Interleukin-1 receptor- 100.0 8.1E-33 2.8E-37 298.9 20.6 217 591-813 13-242 (307)
101 2ac3_A MAP kinase-interacting 100.0 3.5E-33 1.2E-37 303.1 17.6 196 606-808 18-229 (316)
102 1mp8_A Focal adhesion kinase 1 100.0 1.6E-33 5.4E-38 300.9 14.6 203 601-810 15-223 (281)
103 1qpc_A LCK kinase; alpha beta 100.0 2.6E-33 9E-38 298.5 16.3 202 601-809 13-215 (279)
104 1k9a_A Carboxyl-terminal SRC k 100.0 5.6E-33 1.9E-37 317.6 19.9 197 602-810 194-392 (450)
105 3mtl_A Cell division protein k 100.0 2.4E-33 8.3E-38 306.3 16.1 208 603-818 4-214 (324)
106 3qup_A Tyrosine-protein kinase 100.0 2E-33 6.9E-38 306.1 15.4 207 600-809 22-244 (323)
107 4agu_A Cyclin-dependent kinase 100.0 4.3E-33 1.5E-37 301.7 17.8 203 603-813 5-211 (311)
108 3vhe_A Vascular endothelial gr 100.0 1.1E-33 3.6E-38 312.8 13.1 208 599-809 20-300 (359)
109 3p1a_A MYT1 kinase, membrane-a 100.0 9.7E-33 3.3E-37 299.8 20.5 204 594-807 50-257 (311)
110 3eb0_A Putative uncharacterize 100.0 2.8E-33 9.6E-38 313.1 16.5 208 602-819 8-256 (383)
111 3op5_A Serine/threonine-protei 100.0 3E-33 1E-37 310.6 16.6 201 601-808 35-264 (364)
112 2jam_A Calcium/calmodulin-depe 100.0 3.8E-33 1.3E-37 301.5 16.9 200 600-809 8-211 (304)
113 3kfa_A Tyrosine-protein kinase 100.0 1.4E-33 4.6E-38 302.0 13.2 205 599-809 11-217 (288)
114 3bhy_A Death-associated protei 100.0 8.2E-33 2.8E-37 295.1 19.2 201 600-809 4-215 (283)
115 3dtc_A Mitogen-activated prote 100.0 3.7E-33 1.3E-37 295.8 16.4 199 602-809 8-218 (271)
116 2rku_A Serine/threonine-protei 100.0 7.7E-33 2.6E-37 297.4 19.1 200 602-809 16-219 (294)
117 3soc_A Activin receptor type-2 100.0 1.4E-33 4.9E-38 307.8 13.5 200 602-808 25-241 (322)
118 2eue_A Carbon catabolite derep 100.0 3.6E-33 1.2E-37 297.0 16.2 197 603-809 15-216 (275)
119 3rp9_A Mitogen-activated prote 100.0 3.4E-33 1.2E-37 320.0 17.2 198 602-807 54-297 (458)
120 3kk8_A Calcium/calmodulin depe 100.0 6.9E-33 2.4E-37 295.8 18.3 199 602-809 7-211 (284)
121 3cok_A Serine/threonine-protei 100.0 4.2E-33 1.4E-37 296.8 16.2 200 603-809 13-216 (278)
122 2owb_A Serine/threonine-protei 100.0 7.7E-33 2.6E-37 303.8 18.6 201 601-809 41-245 (335)
123 3q4u_A Activin receptor type-1 100.0 4.8E-33 1.7E-37 299.4 16.7 194 602-807 9-235 (301)
124 3gbz_A Kinase, CMGC CDK; ssgci 100.0 2.8E-33 9.7E-38 306.5 15.1 207 602-817 35-250 (329)
125 1nxk_A MAP kinase-activated pr 100.0 1.2E-32 4E-37 310.1 20.5 192 606-809 67-267 (400)
126 3kex_A Receptor tyrosine-prote 100.0 6.3E-33 2.2E-37 303.1 17.8 201 602-809 14-222 (325)
127 1csn_A Casein kinase-1; phosph 100.0 1.5E-32 5.3E-37 295.0 20.4 199 602-809 11-222 (298)
128 3fdn_A Serine/threonine-protei 100.0 4.5E-33 1.5E-37 296.9 16.0 198 603-810 11-212 (279)
129 1t46_A HOMO sapiens V-KIT hard 100.0 4.1E-33 1.4E-37 301.7 15.9 206 601-809 23-252 (313)
130 1j1b_A Glycogen synthase kinas 100.0 5.6E-33 1.9E-37 314.7 17.5 207 603-819 56-271 (420)
131 1u5q_A Serine/threonine protei 100.0 7.2E-33 2.5E-37 306.0 17.8 198 600-809 53-257 (348)
132 2h34_A Serine/threonine-protei 100.0 5.5E-33 1.9E-37 301.3 16.4 201 602-809 35-239 (309)
133 3poz_A Epidermal growth factor 100.0 5.3E-33 1.8E-37 304.0 16.1 202 601-809 15-224 (327)
134 3lij_A Calcium/calmodulin depe 100.0 1.1E-32 3.6E-37 319.1 19.4 200 600-809 36-241 (494)
135 3lb7_A RAF proto-oncogene seri 100.0 2E-33 6.8E-38 304.8 12.5 204 597-809 32-241 (307)
136 3i6u_A CDS1, serine/threonine- 100.0 9.6E-33 3.3E-37 312.8 17.8 200 600-809 134-348 (419)
137 3mwu_A Calmodulin-domain prote 100.0 8.9E-33 3.1E-37 319.0 17.8 200 600-809 21-226 (486)
138 3nyv_A Calmodulin-domain prote 100.0 6.8E-33 2.3E-37 319.7 16.8 201 599-809 24-231 (484)
139 3n9x_A Phosphotransferase; mal 100.0 1.3E-32 4.4E-37 313.0 18.7 196 602-805 27-252 (432)
140 1cm8_A Phosphorylated MAP kina 100.0 5.7E-33 2E-37 309.0 15.4 204 602-818 26-239 (367)
141 2wqm_A Serine/threonine-protei 100.0 1.2E-32 4.1E-37 298.3 17.4 203 602-808 33-239 (310)
142 3dbq_A Dual specificity protei 100.0 7.4E-33 2.5E-37 305.0 16.1 197 602-807 10-222 (343)
143 2w5a_A Serine/threonine-protei 100.0 3E-33 1E-37 297.9 12.4 204 602-809 7-220 (279)
144 2pvf_A Fibroblast growth facto 100.0 8.6E-33 2.9E-37 303.1 16.3 208 599-809 33-264 (334)
145 2h8h_A Proto-oncogene tyrosine 100.0 2.3E-33 7.9E-38 327.6 12.4 202 601-809 267-469 (535)
146 4aaa_A Cyclin-dependent kinase 100.0 1E-32 3.5E-37 302.0 16.6 207 602-816 26-236 (331)
147 2vgo_A Serine/threonine-protei 100.0 1E-32 3.5E-37 294.9 16.2 198 602-809 15-216 (284)
148 2i1m_A Macrophage colony-stimu 100.0 6.1E-33 2.1E-37 303.7 14.7 207 600-809 45-271 (333)
149 3lm5_A Serine/threonine-protei 100.0 1.9E-32 6.6E-37 299.6 18.7 210 593-809 20-237 (327)
150 1ua2_A CAK, cell division prot 100.0 8.7E-33 3E-37 304.7 16.0 210 601-818 10-226 (346)
151 3mi9_A Cell division protein k 100.0 1.7E-32 5.6E-37 302.8 18.2 209 602-817 18-241 (351)
152 3byv_A Rhoptry kinase; malaria 100.0 1.5E-33 5.3E-38 314.6 10.0 199 602-809 74-317 (377)
153 4eut_A Serine/threonine-protei 100.0 6E-33 2.1E-37 312.0 14.7 202 602-809 10-227 (396)
154 2buj_A Serine/threonine-protei 100.0 7.9E-33 2.7E-37 300.5 15.0 204 601-807 29-248 (317)
155 2yex_A Serine/threonine-protei 100.0 2E-32 6.7E-37 290.9 17.6 202 601-809 7-212 (276)
156 4e5w_A Tyrosine-protein kinase 100.0 6.1E-33 2.1E-37 299.0 13.8 202 599-806 19-230 (302)
157 3cc6_A Protein tyrosine kinase 100.0 1.3E-32 4.5E-37 293.6 16.2 201 602-809 13-219 (281)
158 4f0f_A Serine/threonine-protei 100.0 2.4E-32 8.1E-37 292.4 18.1 196 602-809 20-232 (287)
159 3q5i_A Protein kinase; CDPK, m 100.0 2.3E-32 7.8E-37 317.1 19.3 199 601-809 36-251 (504)
160 4fvq_A Tyrosine-protein kinase 100.0 2.3E-33 8E-38 300.3 10.2 196 601-807 8-221 (289)
161 4e7w_A Glycogen synthase kinas 100.0 1.5E-32 5E-37 308.7 17.1 208 602-819 41-256 (394)
162 2v62_A Serine/threonine-protei 100.0 1.1E-32 3.8E-37 303.8 15.7 202 598-807 34-262 (345)
163 3rgf_A Cyclin-dependent kinase 100.0 1.6E-32 5.3E-37 309.4 17.0 197 606-808 26-239 (405)
164 2xrw_A Mitogen-activated prote 100.0 1.7E-32 5.7E-37 305.6 16.8 200 602-813 26-234 (371)
165 1x8b_A WEE1HU, WEE1-like prote 100.0 2.7E-32 9.4E-37 290.8 17.8 200 600-807 10-233 (289)
166 2y7j_A Phosphorylase B kinase 100.0 3.7E-32 1.3E-36 302.3 19.6 200 601-809 94-309 (365)
167 3qyz_A Mitogen-activated prote 100.0 2.4E-32 8.1E-37 303.4 17.9 209 602-819 28-246 (364)
168 3a7i_A MST3 kinase, serine/thr 100.0 3.7E-32 1.3E-36 293.4 18.9 198 603-809 24-223 (303)
169 2ycf_A Serine/threonine-protei 100.0 4.4E-32 1.5E-36 295.8 19.5 201 599-809 8-223 (322)
170 2zmd_A Dual specificity protei 100.0 1.5E-32 5.1E-37 308.2 16.2 197 602-807 57-269 (390)
171 3eqc_A Dual specificity mitoge 100.0 9.7E-33 3.3E-37 305.7 14.4 200 601-809 33-234 (360)
172 2eva_A TAK1 kinase - TAB1 chim 100.0 2.3E-32 7.9E-37 296.2 16.9 197 602-808 9-206 (307)
173 3pg1_A Mitogen-activated prote 100.0 2.1E-32 7.2E-37 303.1 16.9 209 602-819 23-248 (362)
174 2fst_X Mitogen-activated prote 100.0 7.9E-33 2.7E-37 307.9 13.5 204 602-818 30-243 (367)
175 3lxp_A Non-receptor tyrosine-p 100.0 2.3E-32 7.7E-37 297.7 16.8 197 603-807 33-239 (318)
176 3kmu_A ILK, integrin-linked ki 100.0 1.1E-32 3.6E-37 291.7 13.8 196 602-809 11-215 (271)
177 1u59_A Tyrosine-protein kinase 100.0 3.9E-32 1.3E-36 291.0 18.4 196 607-809 16-218 (287)
178 3nsz_A CK II alpha, casein kin 100.0 7E-32 2.4E-36 294.7 20.5 192 601-807 36-233 (330)
179 1fvr_A Tyrosine-protein kinase 100.0 2.1E-32 7.1E-37 299.0 16.3 203 602-809 26-246 (327)
180 3og7_A AKAP9-BRAF fusion prote 100.0 4.7E-33 1.6E-37 298.6 10.9 203 597-808 20-228 (289)
181 3uzp_A CKI-delta, CKID, casein 100.0 7.9E-32 2.7E-36 289.2 20.4 198 602-808 10-218 (296)
182 3q60_A ROP5B; pseudokinase, tr 100.0 8.7E-33 3E-37 307.7 13.2 195 603-808 64-296 (371)
183 1p4o_A Insulin-like growth fac 100.0 9.8E-33 3.3E-37 300.4 13.3 207 600-809 24-245 (322)
184 4hgt_A Casein kinase I isoform 100.0 6.5E-32 2.2E-36 289.6 19.5 200 601-809 9-219 (296)
185 2xir_A Vascular endothelial gr 100.0 1.5E-32 5E-37 297.8 14.4 207 600-809 26-255 (316)
186 2h6d_A 5'-AMP-activated protei 100.0 2E-32 6.8E-37 291.0 15.1 199 602-809 12-215 (276)
187 3kvw_A DYRK2, dual specificity 100.0 3.1E-32 1E-36 309.5 17.4 207 601-818 97-312 (429)
188 2a19_B Interferon-induced, dou 100.0 5.5E-32 1.9E-36 288.4 18.3 200 596-806 6-222 (284)
189 2r3i_A Cell division protein k 100.0 3.4E-32 1.2E-36 292.7 16.6 203 603-812 5-211 (299)
190 2i6l_A Mitogen-activated prote 100.0 3.3E-32 1.1E-36 295.1 16.6 207 602-817 12-237 (320)
191 3com_A Serine/threonine-protei 100.0 5.6E-32 1.9E-36 293.3 18.1 202 598-808 26-228 (314)
192 1mqb_A Ephrin type-A receptor 100.0 2.4E-32 8.3E-37 299.6 15.4 203 601-809 44-255 (333)
193 2jii_A Serine/threonine-protei 100.0 1.9E-32 6.6E-37 302.6 14.6 197 601-808 42-271 (352)
194 3ll6_A Cyclin G-associated kin 100.0 3.2E-32 1.1E-36 297.4 16.2 203 601-808 28-256 (337)
195 2ozo_A Tyrosine-protein kinase 100.0 3.4E-32 1.2E-36 322.5 17.7 195 608-809 343-544 (613)
196 3brb_A Proto-oncogene tyrosine 100.0 1.6E-32 5.5E-37 297.6 13.7 208 599-809 32-254 (313)
197 3f66_A Hepatocyte growth facto 100.0 4.1E-32 1.4E-36 292.1 16.7 201 603-809 27-237 (298)
198 3e3p_A Protein kinase, putativ 100.0 4E-32 1.4E-36 300.3 17.0 212 601-819 23-246 (360)
199 1t4h_A Serine/threonine-protei 100.0 7.5E-32 2.6E-36 289.1 18.5 194 603-807 28-231 (290)
200 3lzb_A Epidermal growth factor 100.0 4.4E-32 1.5E-36 296.9 17.0 201 602-809 16-224 (327)
201 3lxl_A Tyrosine-protein kinase 100.0 2.4E-32 8.2E-37 298.5 14.8 201 601-807 23-232 (327)
202 3fme_A Dual specificity mitoge 100.0 2.3E-32 8E-37 292.5 14.4 201 602-807 8-215 (290)
203 3c1x_A Hepatocyte growth facto 100.0 2E-32 6.7E-37 305.4 14.3 201 603-809 91-301 (373)
204 1phk_A Phosphorylase kinase; g 100.0 8.3E-32 2.8E-36 289.6 18.5 199 602-809 18-233 (298)
205 3pls_A Macrophage-stimulating 100.0 6.7E-32 2.3E-36 290.1 17.2 197 605-807 25-231 (298)
206 2j7t_A Serine/threonine-protei 100.0 1.6E-32 5.6E-37 295.7 12.4 201 602-809 20-226 (302)
207 2pml_X PFPK7, Ser/Thr protein 100.0 3.2E-32 1.1E-36 299.6 14.9 201 602-809 32-256 (348)
208 2clq_A Mitogen-activated prote 100.0 8.7E-32 3E-36 288.8 17.9 196 607-807 28-227 (295)
209 1wak_A Serine/threonine-protei 100.0 2.6E-32 8.8E-37 305.4 14.1 210 590-809 26-297 (397)
210 4fl3_A Tyrosine-protein kinase 100.0 3.4E-32 1.2E-36 323.6 15.7 195 607-809 375-577 (635)
211 4exu_A Mitogen-activated prote 100.0 5.3E-32 1.8E-36 301.5 16.3 203 602-818 43-255 (371)
212 1xbb_A Tyrosine-protein kinase 100.0 4.1E-32 1.4E-36 291.5 14.6 200 602-809 17-225 (291)
213 3an0_A Dual specificity mitoge 100.0 5.6E-32 1.9E-36 297.0 15.7 201 602-807 52-259 (340)
214 1blx_A Cyclin-dependent kinase 100.0 1.2E-31 4.1E-36 292.1 17.9 209 602-818 12-232 (326)
215 1byg_A CSK, protein (C-termina 100.0 4E-32 1.4E-36 289.4 13.8 196 602-809 22-219 (278)
216 2x7f_A TRAF2 and NCK-interacti 100.0 1.1E-31 3.9E-36 292.5 17.5 201 602-809 25-238 (326)
217 1b6c_B TGF-B superfamily recep 100.0 1.4E-31 4.7E-36 293.6 18.3 204 593-808 34-270 (342)
218 2wtk_C Serine/threonine-protei 100.0 1.2E-31 4.1E-36 289.3 16.9 202 602-809 6-217 (305)
219 2vwi_A Serine/threonine-protei 100.0 2.1E-32 7E-37 294.6 10.7 204 602-808 16-230 (303)
220 3mdy_A Bone morphogenetic prot 100.0 2.3E-31 7.8E-36 291.1 19.0 203 596-807 32-264 (337)
221 2b9h_A MAP kinase FUS3, mitoge 100.0 1.2E-31 4.3E-36 295.5 17.0 200 602-810 12-228 (353)
222 3sv0_A Casein kinase I-like; t 100.0 3.7E-31 1.3E-35 304.4 20.7 199 602-809 8-217 (483)
223 1z57_A Dual specificity protei 100.0 1.7E-31 5.7E-36 291.7 17.0 201 600-811 13-240 (339)
224 2yfx_A Tyrosine-protein kinase 100.0 5.7E-32 1.9E-36 295.5 13.2 209 598-809 27-250 (327)
225 2w1i_A JAK2; chromosomal rearr 100.0 9.4E-32 3.2E-36 293.8 14.5 201 601-807 41-250 (326)
226 2wei_A Calmodulin-domain prote 100.0 2.6E-31 9E-36 284.6 17.7 203 597-809 18-226 (287)
227 2iwi_A Serine/threonine-protei 100.0 1.2E-31 4.1E-36 290.7 15.0 201 597-807 27-241 (312)
228 1u46_A ACK-1, activated CDC42 100.0 7.6E-32 2.6E-36 288.6 12.9 202 601-809 18-229 (291)
229 3a99_A Proto-oncogene serine/t 100.0 1.2E-31 4E-36 292.5 14.5 198 600-807 42-251 (320)
230 3coi_A Mitogen-activated prote 100.0 1.3E-31 4.5E-36 295.9 14.9 202 602-817 25-236 (353)
231 3g2f_A Bone morphogenetic prot 100.0 8.2E-32 2.8E-36 294.9 12.6 197 602-807 14-237 (336)
232 2eu9_A Dual specificity protei 100.0 1.7E-31 5.7E-36 293.9 15.0 205 596-811 14-245 (355)
233 2vx3_A Dual specificity tyrosi 100.0 3.4E-31 1.2E-35 296.2 16.8 210 601-819 54-272 (382)
234 2vuw_A Serine/threonine-protei 100.0 9.3E-32 3.2E-36 295.1 10.7 193 599-807 18-279 (336)
235 2j0j_A Focal adhesion kinase 1 100.0 2.8E-31 9.5E-36 316.9 15.3 203 600-809 389-597 (656)
236 3gxj_A TGF-beta receptor type- 100.0 4E-33 1.4E-37 300.2 -0.6 194 602-807 4-230 (303)
237 2y4i_B KSR2, HKSR2, kinase sup 100.0 2.9E-31 1E-35 288.1 13.1 199 602-809 34-247 (319)
238 1zy4_A Serine/threonine-protei 100.0 1.1E-30 3.8E-35 280.5 17.3 193 601-800 6-226 (303)
239 2rio_A Serine/threonine-protei 100.0 5.1E-31 1.7E-35 300.0 14.3 197 605-808 19-243 (434)
240 3cek_A Dual specificity protei 100.0 9.1E-31 3.1E-35 284.0 15.0 199 601-808 28-242 (313)
241 3aln_A Dual specificity mitoge 100.0 1E-30 3.4E-35 285.5 15.0 200 603-807 24-231 (327)
242 1q8y_A SR protein kinase; tran 100.0 9.1E-31 3.1E-35 290.7 13.9 200 600-809 18-239 (373)
243 3fhr_A MAP kinase-activated pr 100.0 1.4E-30 4.9E-35 286.0 15.2 195 603-809 30-233 (336)
244 3p23_A Serine/threonine-protei 100.0 2.4E-30 8.1E-35 294.1 15.7 196 603-808 26-233 (432)
245 2dyl_A Dual specificity mitoge 100.0 3.7E-30 1.3E-34 279.1 15.6 196 603-807 27-231 (318)
246 2pzi_A Probable serine/threoni 100.0 2.3E-30 7.7E-35 311.1 13.7 193 600-808 79-279 (681)
247 3uqc_A Probable conserved tran 100.0 3.2E-30 1.1E-34 276.9 13.0 175 598-809 28-206 (286)
248 3qa8_A MGC80376 protein; kinas 100.0 2.9E-30 9.9E-35 304.2 12.5 202 601-808 14-226 (676)
249 3dzo_A Rhoptry kinase domain; 100.0 1.2E-29 4.3E-34 286.6 13.7 197 605-810 82-322 (413)
250 3m2w_A MAP kinase-activated pr 100.0 3.5E-28 1.2E-32 262.1 17.1 170 606-808 23-201 (299)
251 4azs_A Methyltransferase WBDD; 99.9 8.5E-28 2.9E-32 281.9 3.7 185 608-804 241-437 (569)
252 3en9_A Glycoprotease, O-sialog 99.9 7.8E-25 2.7E-29 255.3 9.4 184 605-806 340-539 (540)
253 1zar_A RIO2 kinase; serine kin 99.8 1.3E-21 4.6E-26 209.2 7.9 141 605-778 94-252 (282)
254 3rgz_A Protein brassinosteroid 99.7 5.4E-19 1.8E-23 215.1 6.2 113 414-526 630-744 (768)
255 1zth_A RIO1 serine protein kin 99.7 4.4E-18 1.5E-22 179.5 9.1 135 604-754 50-219 (258)
256 1ogq_A PGIP-2, polygalacturona 99.7 1.2E-17 4.2E-22 181.1 2.2 182 338-526 123-308 (313)
257 4fcg_A Uncharacterized protein 99.6 1.3E-16 4.4E-21 174.3 7.1 183 339-523 103-291 (328)
258 1p9a_G Platelet glycoprotein I 99.6 6.4E-16 2.2E-20 165.8 11.3 156 339-526 54-212 (290)
259 2o6q_A Variable lymphocyte rec 99.6 6.2E-16 2.1E-20 163.8 10.7 113 413-526 106-222 (270)
260 3m19_A Variable lymphocyte rec 99.6 1.8E-15 6.2E-20 158.4 14.0 156 340-525 35-195 (251)
261 2v9t_B SLIT homolog 2 protein 99.6 2.1E-15 7.3E-20 154.9 12.2 152 343-526 14-169 (220)
262 3oja_A Leucine-rich immune mol 99.6 1.2E-16 4E-21 184.2 1.6 171 339-524 57-252 (487)
263 3zyj_A Leucine-rich repeat-con 99.6 6.4E-16 2.2E-20 175.5 7.4 180 339-526 111-296 (440)
264 3rfs_A Internalin B, repeat mo 99.6 5E-15 1.7E-19 157.1 13.6 157 339-526 62-222 (272)
265 1ozn_A Reticulon 4 receptor; N 99.6 7.1E-16 2.4E-20 164.5 7.1 181 339-526 55-242 (285)
266 3rgz_A Protein brassinosteroid 99.6 4.9E-16 1.7E-20 189.0 6.3 82 439-520 631-715 (768)
267 4gyi_A RIO2 kinase; protein ki 99.6 5.4E-16 1.8E-20 171.1 5.7 138 603-755 97-266 (397)
268 2v70_A SLIT-2, SLIT homolog 2 99.6 2.8E-15 9.4E-20 154.0 10.3 153 344-526 15-170 (220)
269 1p9a_G Platelet glycoprotein I 99.6 2.7E-15 9.2E-20 160.9 10.5 170 340-520 10-183 (290)
270 1w8a_A SLIT protein; signaling 99.6 1.6E-15 5.5E-20 152.3 7.7 154 343-526 11-166 (192)
271 2z66_A Variable lymphocyte rec 99.6 5.8E-16 2E-20 166.8 4.6 183 338-526 76-265 (306)
272 3e6j_A Variable lymphocyte rec 99.6 8.4E-15 2.9E-19 151.3 13.1 150 343-525 22-175 (229)
273 4fcg_A Uncharacterized protein 99.6 7.9E-16 2.7E-20 168.0 4.6 174 338-519 79-263 (328)
274 3zyi_A Leucine-rich repeat-con 99.6 1.1E-15 3.9E-20 174.1 6.1 181 338-526 121-307 (452)
275 2v70_A SLIT-2, SLIT homolog 2 99.6 7.6E-15 2.6E-19 150.8 10.4 137 341-506 33-172 (220)
276 1ogq_A PGIP-2, polygalacturona 99.6 7.7E-16 2.6E-20 166.9 3.0 175 338-520 99-279 (313)
277 3m19_A Variable lymphocyte rec 99.5 1.6E-14 5.4E-19 151.2 11.8 136 338-502 57-194 (251)
278 3v47_A TOLL-like receptor 5B a 99.5 1.8E-14 6.1E-19 163.8 12.8 186 340-526 180-412 (455)
279 3vq2_A TLR4, TOLL-like recepto 99.5 2.9E-15 1E-19 176.8 4.9 182 338-526 374-562 (606)
280 1ozn_A Reticulon 4 receptor; N 99.5 9.3E-15 3.2E-19 155.8 8.3 176 340-520 32-212 (285)
281 2ell_A Acidic leucine-rich nuc 99.5 1.3E-14 4.5E-19 142.0 8.7 136 339-506 23-165 (168)
282 3rfs_A Internalin B, repeat mo 99.5 3.2E-14 1.1E-18 150.8 12.1 138 338-504 83-222 (272)
283 2z62_A TOLL-like receptor 4, v 99.5 4.6E-15 1.6E-19 157.4 5.5 180 339-526 51-241 (276)
284 2v9t_B SLIT homolog 2 protein 99.5 2.1E-14 7.2E-19 147.4 10.3 133 340-501 32-166 (220)
285 2o6s_A Variable lymphocyte rec 99.5 3.7E-14 1.3E-18 143.8 11.9 136 340-504 28-165 (208)
286 3e6j_A Variable lymphocyte rec 99.5 3.7E-14 1.3E-18 146.5 11.9 136 340-504 40-176 (229)
287 2xot_A Amphoterin-induced prot 99.5 8.7E-15 3E-19 161.8 7.6 155 341-526 40-206 (361)
288 4eco_A Uncharacterized protein 99.5 4E-14 1.4E-18 168.4 12.2 183 340-525 402-603 (636)
289 4ezg_A Putative uncharacterize 99.5 2.3E-14 8E-19 144.2 7.6 149 337-520 41-192 (197)
290 2wfh_A SLIT homolog 2 protein 99.5 7.6E-14 2.6E-18 140.3 10.9 107 417-525 32-142 (193)
291 2o6s_A Variable lymphocyte rec 99.5 1.6E-13 5.4E-18 139.2 13.4 151 344-526 11-165 (208)
292 1xku_A Decorin; proteoglycan, 99.5 8E-14 2.7E-18 151.8 11.9 174 340-523 121-307 (330)
293 2o6q_A Variable lymphocyte rec 99.5 4.3E-14 1.5E-18 149.6 9.2 158 339-502 60-220 (270)
294 2z66_A Variable lymphocyte rec 99.5 8.5E-15 2.9E-19 157.7 3.8 185 338-526 99-291 (306)
295 3oja_B Anopheles plasmodium-re 99.5 1E-14 3.5E-19 172.2 4.8 182 338-524 145-360 (597)
296 3o6n_A APL1; leucine-rich repe 99.5 1.5E-14 5.2E-19 161.3 5.8 181 338-523 139-353 (390)
297 2z80_A TOLL-like receptor 2, v 99.5 3.2E-15 1.1E-19 164.5 -0.9 181 339-525 99-317 (353)
298 2z62_A TOLL-like receptor 4, v 99.5 9.1E-14 3.1E-18 147.3 10.2 138 340-507 28-168 (276)
299 2id5_A Lingo-1, leucine rich r 99.5 1.8E-14 6.1E-19 165.1 4.8 181 339-526 151-337 (477)
300 1wwl_A Monocyte differentiatio 99.5 2E-14 6.8E-19 155.6 4.2 105 414-519 171-284 (312)
301 1h6u_A Internalin H; cell adhe 99.5 6.6E-14 2.2E-18 151.3 8.1 170 339-523 62-231 (308)
302 3j0a_A TOLL-like receptor 5; m 99.5 3.8E-14 1.3E-18 174.2 7.0 108 415-525 450-563 (844)
303 4ecn_A Leucine-rich repeat pro 99.5 1.4E-13 4.9E-18 168.0 11.9 107 415-523 727-841 (876)
304 4g8a_A TOLL-like receptor 4; l 99.4 1.1E-13 3.8E-18 163.3 10.5 138 341-507 53-193 (635)
305 2ft3_A Biglycan; proteoglycan, 99.4 8.7E-14 3E-18 151.7 7.8 172 340-522 123-307 (332)
306 3o6n_A APL1; leucine-rich repe 99.4 1.7E-13 5.7E-18 152.8 10.1 157 334-520 39-197 (390)
307 2o6r_A Variable lymphocyte rec 99.4 4.2E-13 1.5E-17 132.4 11.7 131 343-504 10-141 (177)
308 1dce_A Protein (RAB geranylger 99.4 2.8E-14 9.6E-19 167.1 3.6 175 338-520 347-544 (567)
309 3oja_B Anopheles plasmodium-re 99.4 1.7E-13 5.8E-18 161.8 10.2 155 335-519 46-202 (597)
310 2je0_A Acidic leucine-rich nuc 99.4 7.6E-14 2.6E-18 133.6 5.5 127 339-496 16-149 (149)
311 4eco_A Uncharacterized protein 99.4 1.6E-13 5.4E-18 163.3 9.5 175 338-520 247-444 (636)
312 3t6q_A CD180 antigen; protein- 99.4 6.7E-14 2.3E-18 165.2 5.8 181 339-526 375-564 (606)
313 2xot_A Amphoterin-induced prot 99.4 2.7E-13 9.2E-18 149.8 10.2 147 343-520 21-174 (361)
314 3zyi_A Leucine-rich repeat-con 99.4 1.1E-13 3.6E-18 157.8 6.7 176 338-520 97-277 (452)
315 2z63_A TOLL-like receptor 4, v 99.4 1.6E-13 5.5E-18 160.3 8.3 113 413-526 418-535 (570)
316 1h6t_A Internalin B; cell adhe 99.4 3.5E-13 1.2E-17 144.4 9.6 143 339-520 67-211 (291)
317 1w8a_A SLIT protein; signaling 99.4 4.8E-13 1.6E-17 134.2 9.9 111 416-526 29-143 (192)
318 1wwl_A Monocyte differentiatio 99.4 4.3E-14 1.5E-18 153.0 2.3 103 414-521 199-308 (312)
319 4glp_A Monocyte differentiatio 99.4 9.7E-14 3.3E-18 149.9 5.1 176 338-520 89-283 (310)
320 3zyj_A Leucine-rich repeat-con 99.4 1.8E-13 6E-18 155.4 7.5 175 338-520 86-266 (440)
321 3a79_B TLR6, VLRB.59, TOLL-lik 99.4 2.9E-13 1E-17 158.5 9.5 158 338-526 351-514 (562)
322 3vq2_A TLR4, TOLL-like recepto 99.4 4.1E-13 1.4E-17 158.4 10.6 139 340-507 32-173 (606)
323 1m9s_A Internalin B; cell inva 99.4 7.7E-13 2.6E-17 155.9 12.9 125 339-500 64-188 (605)
324 4ecn_A Leucine-rich repeat pro 99.4 6.2E-14 2.1E-18 171.1 3.6 179 338-520 446-655 (876)
325 3v47_A TOLL-like receptor 5B a 99.4 4E-13 1.4E-17 152.6 10.0 140 337-505 272-413 (455)
326 2xwt_C Thyrotropin receptor; s 99.4 3.9E-14 1.3E-18 146.9 1.4 99 420-519 134-236 (239)
327 4glp_A Monocyte differentiatio 99.4 5.1E-13 1.7E-17 144.3 9.8 155 338-522 143-307 (310)
328 4g8a_A TOLL-like receptor 4; l 99.4 4.1E-13 1.4E-17 158.4 9.9 184 337-526 394-584 (635)
329 2z80_A TOLL-like receptor 2, v 99.4 5.4E-14 1.8E-18 154.7 2.0 138 341-507 53-194 (353)
330 2id5_A Lingo-1, leucine rich r 99.4 2.1E-13 7E-18 156.3 6.9 173 341-520 33-211 (477)
331 2z7x_B TOLL-like receptor 1, v 99.4 4.6E-13 1.6E-17 155.0 9.8 157 338-525 322-484 (520)
332 1h6u_A Internalin H; cell adhe 99.4 5E-13 1.7E-17 144.4 9.2 169 337-520 38-206 (308)
333 2ft3_A Biglycan; proteoglycan, 99.4 1.8E-13 6E-18 149.3 5.7 175 338-522 100-277 (332)
334 3t6q_A CD180 antigen; protein- 99.4 3.3E-13 1.1E-17 159.2 8.2 177 339-519 277-459 (606)
335 2z81_A CD282 antigen, TOLL-lik 99.4 2.7E-13 9.2E-18 157.9 7.3 178 340-526 310-514 (549)
336 2xwt_C Thyrotropin receptor; s 99.4 3E-13 1E-17 140.2 6.6 149 341-520 32-190 (239)
337 4ezg_A Putative uncharacterize 99.4 4.6E-13 1.6E-17 134.7 7.7 130 339-501 65-195 (197)
338 4b8c_D Glucose-repressible alc 99.4 8.9E-14 3E-18 167.7 2.0 91 416-507 270-361 (727)
339 3g39_A Variable lymphocyte rec 99.4 1.2E-12 4.2E-17 128.6 9.7 84 417-500 31-115 (170)
340 2wfh_A SLIT homolog 2 protein 99.4 1.1E-12 3.6E-17 131.9 9.3 129 343-503 13-142 (193)
341 2r9u_A Variable lymphocyte rec 99.4 1.5E-12 5E-17 128.6 10.1 103 419-525 15-121 (174)
342 2o6r_A Variable lymphocyte rec 99.4 2.2E-12 7.5E-17 127.2 11.3 121 404-525 8-140 (177)
343 1xeu_A Internalin C; cellular 99.4 5.7E-13 2E-17 140.6 7.5 146 339-500 40-185 (263)
344 4fmz_A Internalin; leucine ric 99.4 5.5E-13 1.9E-17 145.9 7.6 170 338-520 175-344 (347)
345 1h6t_A Internalin B; cell adhe 99.4 1.4E-12 4.9E-17 139.6 10.5 146 338-520 44-189 (291)
346 4b8c_D Glucose-repressible alc 99.3 2.7E-13 9.1E-18 163.5 4.4 136 342-509 203-338 (727)
347 3o53_A Protein LRIM1, AGAP0063 99.3 7.1E-13 2.4E-17 143.7 7.2 151 340-524 99-252 (317)
348 1ziw_A TOLL-like receptor 3; i 99.3 2.4E-12 8.3E-17 154.0 12.5 182 338-526 428-626 (680)
349 1ziw_A TOLL-like receptor 3; i 99.3 1.3E-12 4.4E-17 156.4 9.6 155 340-500 25-184 (680)
350 3j0a_A TOLL-like receptor 5; m 99.3 1.7E-12 5.8E-17 159.5 10.4 140 339-507 23-168 (844)
351 1a9n_A U2A', U2A'; complex (nu 99.3 1E-12 3.5E-17 129.6 6.9 131 337-500 16-153 (176)
352 1m9s_A Internalin B; cell inva 99.3 1.9E-12 6.5E-17 152.5 10.3 147 337-520 40-186 (605)
353 2z63_A TOLL-like receptor 4, v 99.3 2.3E-12 7.9E-17 150.5 10.7 138 340-506 28-168 (570)
354 1xku_A Decorin; proteoglycan, 99.3 2.4E-12 8.3E-17 140.0 9.6 168 341-519 53-226 (330)
355 2z81_A CD282 antigen, TOLL-lik 99.3 1.6E-12 5.4E-17 151.4 8.6 139 340-507 26-168 (549)
356 2z7x_B TOLL-like receptor 1, v 99.3 1.5E-12 5.3E-17 150.6 7.9 87 415-507 68-160 (520)
357 3g39_A Variable lymphocyte rec 99.3 2.6E-12 8.8E-17 126.3 8.0 106 417-526 10-119 (170)
358 3oja_A Leucine-rich immune mol 99.3 4.9E-13 1.7E-17 153.9 3.2 178 338-520 32-225 (487)
359 3cvr_A Invasion plasmid antige 99.3 1.3E-12 4.4E-17 152.5 6.2 147 339-509 99-252 (571)
360 3o53_A Protein LRIM1, AGAP0063 99.3 6.2E-13 2.1E-17 144.1 2.9 139 339-508 119-259 (317)
361 3bz5_A Internalin-J, INLJ; leu 99.3 5.8E-12 2E-16 143.7 10.7 158 339-517 105-262 (457)
362 2jwp_A Malectin, MGC80075; sug 99.3 1.6E-11 5.5E-16 121.1 12.2 139 33-176 8-171 (174)
363 1xeu_A Internalin C; cellular 99.3 1.2E-12 4.3E-17 138.0 4.4 169 337-523 16-186 (263)
364 1o6v_A Internalin A; bacterial 99.3 7.1E-12 2.4E-16 143.2 10.6 105 414-523 285-389 (466)
365 2r9u_A Variable lymphocyte rec 99.3 7E-12 2.4E-16 123.7 8.5 92 415-507 32-124 (174)
366 3a79_B TLR6, VLRB.59, TOLL-lik 99.2 1.2E-11 4.2E-16 144.6 10.6 133 340-507 52-191 (562)
367 2ca6_A RAN GTPase-activating p 99.2 3.6E-13 1.2E-17 149.9 -2.4 181 338-522 92-316 (386)
368 4fmz_A Internalin; leucine ric 99.2 8.3E-12 2.9E-16 136.5 8.4 169 338-521 153-323 (347)
369 1o6v_A Internalin A; bacterial 99.2 9.3E-12 3.2E-16 142.2 8.7 148 339-501 198-345 (466)
370 3cvr_A Invasion plasmid antige 99.2 1E-11 3.4E-16 145.0 8.7 155 340-522 80-243 (571)
371 3bz5_A Internalin-J, INLJ; leu 99.2 1.6E-11 5.5E-16 140.0 9.7 162 338-519 40-201 (457)
372 2ell_A Acidic leucine-rich nuc 99.2 1.4E-11 4.9E-16 120.2 7.7 104 415-520 23-131 (168)
373 2je0_A Acidic leucine-rich nuc 99.2 1.1E-11 3.8E-16 118.4 5.9 104 415-520 16-124 (149)
374 2ifg_A High affinity nerve gro 99.2 1.5E-11 5.2E-16 134.7 7.2 102 421-525 13-119 (347)
375 3g06_A SSPH2 (leucine-rich rep 99.2 3.5E-11 1.2E-15 142.0 10.7 85 416-508 221-305 (622)
376 3tm0_A Aminoglycoside 3'-phosp 99.2 6.6E-11 2.3E-15 124.2 10.6 140 604-753 17-213 (263)
377 1dce_A Protein (RAB geranylger 99.2 1.9E-11 6.5E-16 143.0 6.8 90 414-506 461-551 (567)
378 3g06_A SSPH2 (leucine-rich rep 99.1 1.8E-10 6.2E-15 135.9 14.0 92 417-520 202-295 (622)
379 1jl5_A Outer protein YOPM; leu 99.1 1.4E-10 4.8E-15 132.1 12.1 137 340-519 131-267 (454)
380 2ifg_A High affinity nerve gro 99.1 4.1E-11 1.4E-15 131.2 7.4 84 416-500 31-116 (347)
381 2ast_B S-phase kinase-associat 99.1 3.3E-12 1.1E-16 139.0 -2.9 158 338-498 91-258 (336)
382 1ds9_A Outer arm dynein; leuci 99.1 1E-12 3.5E-17 132.3 -6.5 123 349-505 34-158 (198)
383 2ca6_A RAN GTPase-activating p 99.1 1.8E-11 6.1E-16 136.2 2.8 182 338-520 58-285 (386)
384 4ay9_X Follicle-stimulating ho 99.1 1.3E-11 4.5E-16 135.6 1.5 176 340-522 30-236 (350)
385 1jl5_A Outer protein YOPM; leu 99.1 1.7E-10 6E-15 131.3 9.6 84 417-507 318-418 (454)
386 1a9n_A U2A', U2A'; complex (nu 99.0 1.9E-10 6.5E-15 113.3 7.2 104 415-522 18-126 (176)
387 1nd4_A Aminoglycoside 3'-phosp 99.0 6.3E-10 2.2E-14 115.9 10.4 131 608-753 26-214 (264)
388 2ast_B S-phase kinase-associat 99.0 2E-11 6.7E-16 132.8 -1.5 175 340-520 70-258 (336)
389 3goz_A Leucine-rich repeat-con 99.0 1.6E-11 5.4E-16 135.5 -3.1 180 340-520 22-236 (362)
390 1ds9_A Outer arm dynein; leuci 99.0 4.1E-12 1.4E-16 127.8 -9.3 128 338-500 46-185 (198)
391 1z7x_W Ribonuclease inhibitor; 98.9 1.1E-10 3.6E-15 132.7 -1.9 156 340-519 199-380 (461)
392 1z7x_W Ribonuclease inhibitor; 98.9 1.4E-10 4.8E-15 131.7 -1.0 140 339-502 255-413 (461)
393 3goz_A Leucine-rich repeat-con 98.9 8.7E-11 3E-15 129.6 -3.5 175 345-520 3-207 (362)
394 3dxp_A Putative acyl-COA dehyd 98.8 6.1E-09 2.1E-13 114.5 9.9 140 607-753 44-248 (359)
395 3sg8_A APH(2'')-ID; antibiotic 98.8 3.4E-09 1.2E-13 113.8 5.6 187 607-807 26-289 (304)
396 4ay9_X Follicle-stimulating ho 98.8 9.2E-09 3.2E-13 112.8 8.9 134 344-509 13-150 (350)
397 3un9_A NLR family member X1; l 98.7 1.3E-09 4.3E-14 120.9 -0.3 139 340-502 101-254 (372)
398 3sb4_A Hypothetical leucine ri 98.7 6.1E-09 2.1E-13 113.1 5.1 94 415-511 225-320 (329)
399 2jwp_A Malectin, MGC80075; sug 98.6 2.7E-08 9.2E-13 97.9 6.0 108 193-317 6-113 (174)
400 3un9_A NLR family member X1; l 98.6 2.1E-09 7.3E-14 119.0 -2.5 155 338-520 70-250 (372)
401 3rw6_A Nuclear RNA export fact 98.4 1.1E-07 3.8E-12 99.7 3.5 78 415-493 169-257 (267)
402 3sb4_A Hypothetical leucine ri 98.4 4.5E-07 1.5E-11 98.3 7.6 78 439-519 225-307 (329)
403 3ogk_B Coronatine-insensitive 98.3 1.5E-08 5.1E-13 118.8 -4.7 163 339-501 341-527 (592)
404 3r70_A Aminoglycoside phosphot 98.3 1.6E-06 5.5E-11 93.6 10.3 181 607-804 43-297 (320)
405 3d1u_A Putative fructosamine-3 98.2 4.1E-06 1.4E-10 89.1 11.7 74 607-684 21-97 (288)
406 3tdw_A Gentamicin resistance p 98.1 9.6E-06 3.3E-10 87.0 11.8 136 607-754 25-225 (306)
407 3ogk_B Coronatine-insensitive 98.1 3E-07 1E-11 107.6 -0.5 159 338-497 110-280 (592)
408 3rw6_A Nuclear RNA export fact 98.1 4.3E-07 1.5E-11 95.3 0.2 81 421-504 148-237 (267)
409 3ats_A Putative uncharacterize 98.1 7.2E-06 2.5E-10 89.7 9.5 79 607-685 26-121 (357)
410 2p1m_B Transport inhibitor res 98.1 9.4E-08 3.2E-12 111.9 -6.1 180 338-519 287-491 (594)
411 2ra8_A Uncharacterized protein 98.0 1.1E-06 3.7E-11 96.7 1.7 86 416-501 193-293 (362)
412 4gkh_A Aminoglycoside 3'-phosp 98.0 1.9E-05 6.5E-10 82.5 11.2 135 608-753 31-223 (272)
413 1io0_A Tropomodulin; LRR prote 98.0 1.3E-06 4.3E-11 86.7 1.3 119 357-500 30-164 (185)
414 3ovc_A Hygromycin-B 4-O-kinase 98.0 2.2E-05 7.4E-10 86.4 10.7 72 607-684 47-121 (362)
415 2p1m_B Transport inhibitor res 97.8 1.5E-06 5E-11 101.7 -2.0 37 461-497 287-324 (594)
416 2olc_A MTR kinase, methylthior 97.8 7E-05 2.4E-09 83.1 10.9 74 607-682 36-120 (397)
417 2q83_A YTAA protein; 2635576, 97.8 0.0001 3.6E-09 79.4 11.7 141 608-753 39-252 (346)
418 4fdw_A Leucine rich hypothetic 97.7 2.4E-05 8.2E-10 87.2 6.0 168 339-519 179-355 (401)
419 3f7w_A Putative fructosamine-3 97.6 0.00024 8.1E-09 75.1 11.5 73 607-683 21-96 (288)
420 1io0_A Tropomodulin; LRR prote 97.6 8.6E-06 3E-10 80.6 -0.1 113 339-476 35-164 (185)
421 2ra8_A Uncharacterized protein 97.6 1.1E-05 3.6E-10 88.8 -0.1 87 414-500 217-320 (362)
422 4fdw_A Leucine rich hypothetic 97.4 0.0001 3.4E-09 82.2 5.4 156 340-509 203-366 (401)
423 3jr1_A Putative fructosamine-3 97.4 0.00054 1.9E-08 73.5 10.9 138 607-749 42-232 (312)
424 2pyw_A Uncharacterized protein 97.4 0.00018 6.2E-09 80.5 7.0 78 723-802 232-313 (420)
425 2ppq_A HSK, HK, homoserine kin 97.1 0.0014 4.8E-08 70.1 9.5 144 607-753 28-217 (322)
426 3e4g_A ATP synthase subunit S, 97.0 8E-05 2.7E-09 72.7 -0.7 85 416-500 61-153 (176)
427 3csv_A Aminoglycoside phosphot 97.0 0.0033 1.1E-07 67.6 11.9 142 608-754 25-218 (333)
428 3dxq_A Choline/ethanolamine ki 97.0 0.0024 8.2E-08 67.8 10.2 70 607-684 24-95 (301)
429 1nw1_A Choline kinase (49.2 KD 96.7 0.0024 8.4E-08 71.6 8.4 71 607-683 79-158 (429)
430 3rfe_A Platelet glycoprotein I 96.6 0.0017 6E-08 60.0 5.2 37 464-500 32-68 (130)
431 3rfe_A Platelet glycoprotein I 96.6 0.0016 5.4E-08 60.3 4.6 56 419-476 11-68 (130)
432 1zyl_A Hypothetical protein YI 96.6 0.01 3.5E-07 63.5 11.6 142 608-753 33-223 (328)
433 3feg_A Choline/ethanolamine ki 96.5 0.0049 1.7E-07 67.8 8.8 142 607-753 56-254 (379)
434 2qg7_A Ethanolamine kinase PV0 96.3 0.017 5.9E-07 65.1 11.9 72 607-683 114-187 (458)
435 3c5i_A Choline kinase; choline 96.3 0.0066 2.3E-07 66.3 8.3 72 607-683 39-120 (369)
436 3i1a_A Spectinomycin phosphotr 96.1 0.021 7.3E-07 61.6 11.1 68 610-684 32-108 (339)
437 1pgv_A TMD-1, tropomodulin TMD 95.6 0.0036 1.2E-07 62.1 1.9 112 363-499 41-169 (197)
438 3f2s_A CK, chetk-alpha, cholin 95.4 0.046 1.6E-06 60.4 9.8 142 608-753 59-280 (401)
439 3mes_A Choline kinase; malaria 94.6 0.069 2.3E-06 59.5 8.6 72 607-683 76-156 (424)
440 4fs7_A Uncharacterized protein 94.3 0.054 1.9E-06 59.5 7.1 80 415-497 296-376 (394)
441 4h09_A Hypothetical leucine ri 94.3 0.073 2.5E-06 58.0 7.8 89 416-509 263-353 (379)
442 1pgv_A TMD-1, tropomodulin TMD 93.9 0.0076 2.6E-07 59.8 -1.0 83 416-498 41-137 (197)
443 4gt6_A Cell surface protein; l 93.2 0.091 3.1E-06 57.7 6.1 81 416-500 288-370 (394)
444 3e4g_A ATP synthase subunit S, 93.0 0.018 6.3E-07 55.9 0.1 70 431-500 52-128 (176)
445 4gt6_A Cell surface protein; l 91.6 0.22 7.6E-06 54.6 6.7 99 416-519 265-367 (394)
446 4h09_A Hypothetical leucine ri 91.1 0.25 8.5E-06 53.7 6.4 91 416-510 240-331 (379)
447 2yle_A Protein spire homolog 1 90.1 0.97 3.3E-05 45.2 8.9 120 683-822 34-154 (229)
448 4fs7_A Uncharacterized protein 89.3 0.26 8.9E-06 54.0 4.6 75 414-492 318-393 (394)
449 3g15_A CK, chetk-alpha, cholin 85.8 2.7 9.1E-05 46.1 10.2 30 724-753 245-280 (401)
450 4ann_A ESSB; membrane protein, 76.6 5.9 0.0002 39.4 7.7 123 647-806 36-158 (215)
451 3cxl_A N-chimerin; SH2, RHO-GA 74.0 0.37 1.3E-05 54.2 -2.0 59 606-667 147-214 (463)
452 4ano_A ESSB; membrane protein, 71.6 5.9 0.0002 39.5 6.3 83 655-751 48-131 (219)
453 2ks1_B Epidermal growth factor 51.1 3 0.0001 30.3 -0.1 18 542-559 21-38 (44)
454 2jwa_A Receptor tyrosine-prote 42.3 2.5 8.7E-05 30.6 -1.7 7 535-541 14-20 (44)
455 1nrp_R Receptor based peptide 35.7 13 0.00044 22.6 0.9 16 205-220 6-21 (26)
456 1nro_R Receptor based peptide 33.2 15 0.00051 22.5 1.0 17 205-221 6-22 (27)
457 2w3j_A Carbohydrate binding mo 28.6 3.3E+02 0.011 24.6 10.6 88 89-181 42-134 (145)
458 3ls8_A Phosphatidylinositol 3- 25.6 6.7E+02 0.023 28.6 13.7 45 700-751 454-500 (614)
459 2lz0_A Uncharacterized protein 22.8 1E+02 0.0035 26.2 4.9 44 452-496 8-52 (100)
No 1
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=6.4e-45 Score=392.81 Aligned_cols=208 Identities=25% Similarity=0.389 Sum_probs=182.7
Q ss_pred HHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCC---cccchhhhHHHHHHhhcCCCccceeeceeecCCeEEEEEEe
Q 003385 603 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 678 (824)
Q Consensus 603 ~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~---~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~ 678 (824)
|++.+.||+|+||+||+|+++ +++.||||++++.. ....+.+.+|+++|++++|||||++++++.+++..++||||
T Consensus 34 y~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivmEy 113 (311)
T 4aw0_A 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSY 113 (311)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred cEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEec
Confidence 678899999999999999876 68999999997542 22345688999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccccCCC
Q 003385 679 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 758 (824)
Q Consensus 679 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~ 758 (824)
|++|+|.+++.. ...+++..+..++.||+.||+|||++ +|+||||||+|||+++++++||+|||+|+......
T Consensus 114 ~~gG~L~~~i~~----~~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~ 186 (311)
T 4aw0_A 114 AKNGELLKYIRK----IGSFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186 (311)
T ss_dssp CTTEEHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECCTTT
T ss_pred CCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCC
Confidence 999999999853 45689999999999999999999998 99999999999999999999999999998765432
Q ss_pred -CceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCCCccccchhcH
Q 003385 759 -SHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNI 817 (824)
Q Consensus 759 -~~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~~~~~~~~~~i 817 (824)
.......+||+.|||||++.+..|+.++||||+||++|||++|+.||.+.+..+..++|
T Consensus 187 ~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i 246 (311)
T 4aw0_A 187 KQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKI 246 (311)
T ss_dssp TCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH
T ss_pred CcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 23445678999999999999999999999999999999999999999876644444433
No 2
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=2.1e-44 Score=394.51 Aligned_cols=199 Identities=27% Similarity=0.406 Sum_probs=179.1
Q ss_pred HHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCCcccchhhhHHHHHHhhcCCCccceeeceeecCCeEEEEEEecCC
Q 003385 603 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 681 (824)
Q Consensus 603 ~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~~~ 681 (824)
|.+.++||+|+||+||+|+++ +|+.||||+++.......+.+.+|+++|++++|||||++++++.+++..+||||||++
T Consensus 76 y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~g 155 (346)
T 4fih_A 76 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEG 155 (346)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCCTT
T ss_pred cEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCC
Confidence 556678999999999999986 6899999999766555667789999999999999999999999999999999999999
Q ss_pred CCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccccCCCCce
Q 003385 682 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 761 (824)
Q Consensus 682 gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 761 (824)
|+|.+++.. ..+++..+..++.||+.||+|||++ +|+||||||+|||++.++++||+|||+|+....... .
T Consensus 156 g~L~~~l~~-----~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~-~ 226 (346)
T 4fih_A 156 GALTDIVTH-----TRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP-R 226 (346)
T ss_dssp EEHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSC-C
T ss_pred CcHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCceecCCCCC-c
Confidence 999998842 4589999999999999999999998 999999999999999999999999999987644322 3
Q ss_pred eccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCCCcc
Q 003385 762 SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKF 810 (824)
Q Consensus 762 ~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~~~~ 810 (824)
....+||+.|||||++.+..|+.++||||+||++|||++|+.||.+...
T Consensus 227 ~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~ 275 (346)
T 4fih_A 227 RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP 275 (346)
T ss_dssp BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH
T ss_pred ccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH
Confidence 3456899999999999999999999999999999999999999987553
No 3
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=1.7e-44 Score=389.61 Aligned_cols=207 Identities=29% Similarity=0.526 Sum_probs=178.4
Q ss_pred HHHhhccccccCcEEEEEEEEc------CCcEEEEEEeccCCcccchhhhHHHHHHhhcCCCccceeeceeecCCeEEEE
Q 003385 602 TKMLEKKIGSGGFGVVYYGKLK------DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLV 675 (824)
Q Consensus 602 ~~~i~~~LG~G~fg~Vy~a~~~------~g~~vAVK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV 675 (824)
.+.+.++||+|+||+||+|++. +++.||||+++.......++|.+|+++|++++|||||+++|+|.+++..++|
T Consensus 14 ~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV 93 (299)
T 4asz_A 14 NIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMV 93 (299)
T ss_dssp GEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEE
T ss_pred HeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEE
Confidence 3457789999999999999874 4678999999876666677899999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhhccc---------CccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEE
Q 003385 676 YEFMHNGTLKEHLYGTL---------THEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVS 746 (824)
Q Consensus 676 ~E~~~~gsL~~~L~~~~---------~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~ 746 (824)
||||++|+|.++|.... .....+++.+++.++.||++||+|||++ +|+||||||+|||+++++.+||+
T Consensus 94 ~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~~~~Ki~ 170 (299)
T 4asz_A 94 FEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKIG 170 (299)
T ss_dssp EECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEEC
T ss_pred EEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCCCcEEEC
Confidence 99999999999996532 2345789999999999999999999998 99999999999999999999999
Q ss_pred ecCCcccccCCCCc-eeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHc-CCCCCCCCccc
Q 003385 747 DFGLSKFAVDGASH-VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFG 811 (824)
Q Consensus 747 DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~ellt-G~~Pf~~~~~~ 811 (824)
|||+|+........ ......||+.|||||++.+..|+.++|||||||++|||+| |+.||.+.+..
T Consensus 171 DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~ 237 (299)
T 4asz_A 171 DFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN 237 (299)
T ss_dssp CCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH
T ss_pred CcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH
Confidence 99999865443322 2234568999999999999999999999999999999998 99999875533
No 4
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=2.8e-44 Score=394.10 Aligned_cols=207 Identities=25% Similarity=0.409 Sum_probs=173.9
Q ss_pred HHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCC--cccchhhhHHHHHHhhcCCCccceeeceeecCCeEEEEEEe
Q 003385 602 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 678 (824)
Q Consensus 602 ~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~--~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~ 678 (824)
+|.+.+.||+|+||+||+|+++ +|+.||||+++... ....+.+.+|+++|++++|||||++++++.+++..+|||||
T Consensus 25 ~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmEy 104 (350)
T 4b9d_A 25 KYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDY 104 (350)
T ss_dssp CEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred ceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEeC
Confidence 4667899999999999999976 68999999997543 23346789999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccccCCC
Q 003385 679 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 758 (824)
Q Consensus 679 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~ 758 (824)
|++|+|.+++... ....+++..++.++.||+.||+|||++ +|+||||||+|||+++++.+||+|||+|+......
T Consensus 105 ~~gg~L~~~i~~~--~~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~ 179 (350)
T 4b9d_A 105 CEGGDLFKRINAQ--KGVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTV 179 (350)
T ss_dssp CTTCBHHHHHHHT--TTCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTEESCCCHHH
T ss_pred CCCCcHHHHHHHc--CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccccceeecCCc
Confidence 9999999998542 234578889999999999999999998 99999999999999999999999999998653321
Q ss_pred CceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCCCccccch
Q 003385 759 SHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANC 814 (824)
Q Consensus 759 ~~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~~~~~~~~ 814 (824)
......+||+.|||||++.+..|+.++|||||||++|||++|+.||.+.+..+..
T Consensus 180 -~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~ 234 (350)
T 4b9d_A 180 -ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLV 234 (350)
T ss_dssp -HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred -ccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHH
Confidence 2234567999999999999999999999999999999999999999876544333
No 5
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=1.8e-43 Score=396.41 Aligned_cols=198 Identities=27% Similarity=0.418 Sum_probs=179.0
Q ss_pred HHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCCcccchhhhHHHHHHhhcCCCccceeeceeecCCeEEEEEEecCC
Q 003385 603 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 681 (824)
Q Consensus 603 ~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~~~ 681 (824)
|.+.++||+|+||.||+|+++ +|+.||||++........+.+.+|+++|++++|||||++++++.+.+..|||||||++
T Consensus 153 y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~~g 232 (423)
T 4fie_A 153 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEG 232 (423)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred cEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCCCC
Confidence 556788999999999999986 6899999999876666667789999999999999999999999999999999999999
Q ss_pred CCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccccCCCCce
Q 003385 682 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 761 (824)
Q Consensus 682 gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 761 (824)
|+|.+++. ...+++..+..++.||+.||+|||++ +||||||||+|||++.++++||+|||+|+....... .
T Consensus 233 G~L~~~i~-----~~~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~-~ 303 (423)
T 4fie_A 233 GALTDIVT-----HTRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP-R 303 (423)
T ss_dssp EEHHHHHH-----HSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCC-C
T ss_pred CcHHHHHh-----ccCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccceECCCCCc-c
Confidence 99999884 34588999999999999999999998 999999999999999999999999999987644332 3
Q ss_pred eccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCCCc
Q 003385 762 SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEK 809 (824)
Q Consensus 762 ~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~~~ 809 (824)
....+||+.|||||++.+..|+.++|||||||++|||++|+.||.+..
T Consensus 304 ~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~ 351 (423)
T 4fie_A 304 RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP 351 (423)
T ss_dssp BCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred ccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC
Confidence 345679999999999999999999999999999999999999998754
No 6
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=1.4e-43 Score=387.65 Aligned_cols=205 Identities=29% Similarity=0.513 Sum_probs=172.1
Q ss_pred HhhccccccCcEEEEEEEEc------CCcEEEEEEeccCCcccchhhhHHHHHHhhcCCCccceeeceeecCCeEEEEEE
Q 003385 604 MLEKKIGSGGFGVVYYGKLK------DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYE 677 (824)
Q Consensus 604 ~i~~~LG~G~fg~Vy~a~~~------~g~~vAVK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E 677 (824)
.+.++||+|+||+||+|+++ +++.||||+++.......++|.+|+++|++++|||||+++|+|.+.+..+||||
T Consensus 44 ~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~E 123 (329)
T 4aoj_A 44 VLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFE 123 (329)
T ss_dssp EEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred EEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEE
Confidence 46789999999999999875 478899999987666667789999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhcccC-----------ccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEE
Q 003385 678 FMHNGTLKEHLYGTLT-----------HEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVS 746 (824)
Q Consensus 678 ~~~~gsL~~~L~~~~~-----------~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~ 746 (824)
||++|+|.++++.... ....+++.+++.++.||++||+|||++ +|+||||||+|||+++++.+||+
T Consensus 124 y~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~~~~~~Ki~ 200 (329)
T 4aoj_A 124 YMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQGLVVKIG 200 (329)
T ss_dssp CCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEEC
T ss_pred cCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEECCCCcEEEc
Confidence 9999999999965422 234689999999999999999999998 99999999999999999999999
Q ss_pred ecCCcccccCCCC-ceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHc-CCCCCCCCccc
Q 003385 747 DFGLSKFAVDGAS-HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFG 811 (824)
Q Consensus 747 DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~ellt-G~~Pf~~~~~~ 811 (824)
|||+|+....... ......+||+.|||||++.+..++.++|||||||++|||+| |+.||.+....
T Consensus 201 DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~ 267 (329)
T 4aoj_A 201 DFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT 267 (329)
T ss_dssp CCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHH
T ss_pred ccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHH
Confidence 9999986544322 23345679999999999999999999999999999999999 99999875533
No 7
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=5e-44 Score=387.53 Aligned_cols=205 Identities=25% Similarity=0.436 Sum_probs=176.5
Q ss_pred HHhhccccccCcEEEEEEEEc------CCcEEEEEEeccCCc-ccchhhhHHHHHHhhcCCCccceeeceeecCCeEEEE
Q 003385 603 KMLEKKIGSGGFGVVYYGKLK------DGKEIAVKVLTSNSY-QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLV 675 (824)
Q Consensus 603 ~~i~~~LG~G~fg~Vy~a~~~------~g~~vAVK~l~~~~~-~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV 675 (824)
.++.++||+|+||+||+|++. +++.||||+++.... ...++|.+|+.+|++++|||||+++|+|.+.+..++|
T Consensus 28 ~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV 107 (308)
T 4gt4_A 28 VRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMI 107 (308)
T ss_dssp EEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred CeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEEE
Confidence 456789999999999999873 467899999975432 3346799999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhhccc------------CccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcE
Q 003385 676 YEFMHNGTLKEHLYGTL------------THEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRA 743 (824)
Q Consensus 676 ~E~~~~gsL~~~L~~~~------------~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~v 743 (824)
||||++|+|.++|.... .....+++..++.++.||++||+|||++ +||||||||+|||+++++.+
T Consensus 108 ~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NILl~~~~~~ 184 (308)
T 4gt4_A 108 FSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNV 184 (308)
T ss_dssp EECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCE
T ss_pred EEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceEECCCCCE
Confidence 99999999999996432 1234689999999999999999999998 99999999999999999999
Q ss_pred EEEecCCcccccCCC-CceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHc-CCCCCCCCcc
Q 003385 744 KVSDFGLSKFAVDGA-SHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKF 810 (824)
Q Consensus 744 kL~DFGla~~~~~~~-~~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~ellt-G~~Pf~~~~~ 810 (824)
||+|||+|+...... .......+||+.|||||++.+..|+.++|||||||++|||+| |+.||.+...
T Consensus 185 Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~ 253 (308)
T 4gt4_A 185 KISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN 253 (308)
T ss_dssp EECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCH
T ss_pred EECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCH
Confidence 999999998654332 223345679999999999999999999999999999999998 8999987553
No 8
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=2.7e-43 Score=384.48 Aligned_cols=203 Identities=25% Similarity=0.339 Sum_probs=173.6
Q ss_pred HHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCCcccchhhhHHHHHHhhcCCCccceeeceeecCCeEEEEEEecCC
Q 003385 603 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 681 (824)
Q Consensus 603 ~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~~~ 681 (824)
+.+.++||+|+||+||+|+++ +|+.||||+++.. ....+|+++|++++|||||++++++.+++..+||||||++
T Consensus 60 ~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~-----~~~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~g 134 (336)
T 4g3f_A 60 MTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLE-----VFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEG 134 (336)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETT-----TCCTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTT
T ss_pred eEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHH-----HhHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCC
Confidence 445678999999999999986 6899999999743 2335799999999999999999999999999999999999
Q ss_pred CCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCC-cEEEEecCCcccccCCCCc
Q 003385 682 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHM-RAKVSDFGLSKFAVDGASH 760 (824)
Q Consensus 682 gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~-~vkL~DFGla~~~~~~~~~ 760 (824)
|+|.+++.. ...+++..+..++.||+.||+|||++ +|+||||||+|||++.++ ++||+|||+|+........
T Consensus 135 g~L~~~l~~----~~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~ 207 (336)
T 4g3f_A 135 GSLGQLIKQ----MGCLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLG 207 (336)
T ss_dssp CBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTTCEEC------
T ss_pred CcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcc
Confidence 999999853 45689999999999999999999998 999999999999999987 6999999999876443211
Q ss_pred ----eeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCCCccccchhcH
Q 003385 761 ----VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNI 817 (824)
Q Consensus 761 ----~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~~~~~~~~~~i 817 (824)
.....+||+.|||||++.+..|+.++||||+||++|||++|+.||.+....+...+|
T Consensus 208 ~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i 268 (336)
T 4g3f_A 208 KSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKI 268 (336)
T ss_dssp ------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHH
T ss_pred cceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHH
Confidence 123457999999999999999999999999999999999999999876544444333
No 9
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=1e-43 Score=383.22 Aligned_cols=206 Identities=30% Similarity=0.397 Sum_probs=172.2
Q ss_pred HHhhccccccCcEEEEEEEEc----CCcEEEEEEeccCCc--ccchhhhHHHHHHhhcCCCccceeeceeecCCeEEEEE
Q 003385 603 KMLEKKIGSGGFGVVYYGKLK----DGKEIAVKVLTSNSY--QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVY 676 (824)
Q Consensus 603 ~~i~~~LG~G~fg~Vy~a~~~----~g~~vAVK~l~~~~~--~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~ 676 (824)
|++.+.||+|+||+||+|++. .++.||||+++.... .....+.+|+++|++++|||||++++++.+++..++||
T Consensus 26 Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivm 105 (304)
T 3ubd_A 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLIL 105 (304)
T ss_dssp EEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEEEE
T ss_pred cEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 667899999999999999863 467899999975432 23456888999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccccC
Q 003385 677 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVD 756 (824)
Q Consensus 677 E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~~ 756 (824)
|||++|+|.+++.. ...+++..+..++.||+.||+|||++ +|+||||||+|||+++++++||+|||+|+....
T Consensus 106 Ey~~gg~L~~~l~~----~~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~ 178 (304)
T 3ubd_A 106 DFLRGGDLFTRLSK----EVMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESID 178 (304)
T ss_dssp CCCTTCEEHHHHHH----HCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESSEEEEC---
T ss_pred EcCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEecccccceeccC
Confidence 99999999999853 45689999999999999999999998 999999999999999999999999999986543
Q ss_pred CCCceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCCCccccchhc
Q 003385 757 GASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRN 816 (824)
Q Consensus 757 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~~~~~~~~~~ 816 (824)
... .....+||+.|||||++.+..|+.++||||+||++|||++|+.||.+.+..+....
T Consensus 179 ~~~-~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~ 237 (304)
T 3ubd_A 179 HEK-KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTM 237 (304)
T ss_dssp --C-CCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred CCc-cccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHH
Confidence 322 23456799999999999999999999999999999999999999987654443333
No 10
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=7.4e-43 Score=371.37 Aligned_cols=203 Identities=24% Similarity=0.449 Sum_probs=164.3
Q ss_pred HHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCCc---ccchhhhHHHHHHhhcCCCccceeeceeecCCeEEEEEE
Q 003385 602 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY---QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYE 677 (824)
Q Consensus 602 ~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~---~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E 677 (824)
.|.+.+.||+|+||+||+|+++ +|+.||||++++... ...+.+.+|+++|++++||||+++++++.+++..++|||
T Consensus 14 ~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE 93 (275)
T 3hyh_A 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIE 93 (275)
T ss_dssp CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred CeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEe
Confidence 4678899999999999999875 689999999975432 224568899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccccCC
Q 003385 678 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 757 (824)
Q Consensus 678 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~~~ 757 (824)
|+ +|+|.+++.. ...+++..+..++.||+.||+|||++ +|+||||||+|||+++++++||+|||+|+.....
T Consensus 94 y~-~g~L~~~l~~----~~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~ 165 (275)
T 3hyh_A 94 YA-GNELFDYIVQ----RDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG 165 (275)
T ss_dssp CC-CEEHHHHHHH----SCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSCC------
T ss_pred CC-CCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCCCeecCCC
Confidence 99 6799998853 45689999999999999999999998 9999999999999999999999999999865432
Q ss_pred CCceeccccCCCCCcchhccccCCC-CchHHHHHHHHHHHHHHcCCCCCCCCccccch
Q 003385 758 ASHVSSIVRGTVGYLDPEYYISQQL-TDKSDVYSFGVILLELISGQEAISNEKFGANC 814 (824)
Q Consensus 758 ~~~~~~~~~gt~~y~aPE~l~~~~~-~~~~DIwSlGvil~elltG~~Pf~~~~~~~~~ 814 (824)
. .....+||+.|||||++.+..+ +.++||||+||++|||++|+.||.+....+..
T Consensus 166 ~--~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~ 221 (275)
T 3hyh_A 166 N--FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLF 221 (275)
T ss_dssp -----------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH
T ss_pred C--ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHH
Confidence 2 2345679999999999998876 47999999999999999999999876544333
No 11
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=1.1e-42 Score=376.02 Aligned_cols=198 Identities=35% Similarity=0.609 Sum_probs=165.7
Q ss_pred HHhhccccccCcEEEEEEEEcCCcEEEEEEeccCC--cccchhhhHHHHHHhhcCCCccceeeceeecCCeEEEEEEecC
Q 003385 603 KMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 680 (824)
Q Consensus 603 ~~i~~~LG~G~fg~Vy~a~~~~g~~vAVK~l~~~~--~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~~ 680 (824)
..+.++||+|+||+||+|+++ ..||||+++... ....+.|.+|+++|++++|||||+++|++.+ +..+||||||+
T Consensus 38 l~l~~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmEy~~ 114 (307)
T 3omv_A 38 VMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQWCE 114 (307)
T ss_dssp CCEEEECCCCSSSEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEECCS
T ss_pred eEEeeEEeeCCCcEEEEEEEC--CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEEcCC
Confidence 346789999999999999875 369999987442 2334679999999999999999999999865 46799999999
Q ss_pred CCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccccCCC-C
Q 003385 681 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA-S 759 (824)
Q Consensus 681 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~-~ 759 (824)
+|+|.++|... ...+++.++..++.||++||+|||++ +||||||||+|||+++++.+||+|||+|+...... .
T Consensus 115 gGsL~~~l~~~---~~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~ 188 (307)
T 3omv_A 115 GSSLYKHLHVQ---ETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS 188 (307)
T ss_dssp SCBHHHHHHTS---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSSCBC-------
T ss_pred CCCHHHHHhhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccCceecccCCcc
Confidence 99999999642 45689999999999999999999998 99999999999999999999999999998654322 2
Q ss_pred ceeccccCCCCCcchhcccc---CCCCchHHHHHHHHHHHHHHcCCCCCCCCc
Q 003385 760 HVSSIVRGTVGYLDPEYYIS---QQLTDKSDVYSFGVILLELISGQEAISNEK 809 (824)
Q Consensus 760 ~~~~~~~gt~~y~aPE~l~~---~~~~~~~DIwSlGvil~elltG~~Pf~~~~ 809 (824)
......+||+.|||||++.. ..|+.++|||||||++|||++|+.||.+..
T Consensus 189 ~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~ 241 (307)
T 3omv_A 189 QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHIN 241 (307)
T ss_dssp -----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred eeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCC
Confidence 23345679999999999864 458999999999999999999999998643
No 12
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=1.3e-42 Score=372.51 Aligned_cols=196 Identities=31% Similarity=0.486 Sum_probs=167.4
Q ss_pred HhhccccccCcEEEEEEEEc-CCcEEEEEEeccCC--cccchhhhHHHHHHhhcCCCccceeeceeec----CCeEEEEE
Q 003385 604 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQE----EGRSVLVY 676 (824)
Q Consensus 604 ~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~--~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~----~~~~~lV~ 676 (824)
.+.++||+|+||+||+|.++ +++.||+|++.... ....+.|.+|+++|++++|||||++++++.+ ++..++||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 45678999999999999886 58899999986442 2334678999999999999999999999864 35679999
Q ss_pred EecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcC-CCcEEEEecCCccccc
Q 003385 677 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK-HMRAKVSDFGLSKFAV 755 (824)
Q Consensus 677 E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~-~~~vkL~DFGla~~~~ 755 (824)
|||++|+|.+++.. ...+++..+..++.||+.||+|||++. ++|+||||||+|||++. ++.+||+|||+|+...
T Consensus 109 Ey~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~ylH~~~-~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~ 183 (290)
T 3fpq_A 109 ELMTSGTLKTYLKR----FKVMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR 183 (290)
T ss_dssp ECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred eCCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC-CCEEecccChhheeEECCCCCEEEEeCcCCEeCC
Confidence 99999999999853 456889999999999999999999971 13999999999999985 7999999999997543
Q ss_pred CCCCceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCCC
Q 003385 756 DGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNE 808 (824)
Q Consensus 756 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~~ 808 (824)
. ......+||+.|||||++. +.|+.++|||||||++|||++|+.||.+.
T Consensus 184 ~---~~~~~~~GTp~YmAPE~~~-~~y~~~~DiwSlGvilyelltg~~Pf~~~ 232 (290)
T 3fpq_A 184 A---SFAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSEC 232 (290)
T ss_dssp T---TSBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred C---CccCCcccCccccCHHHcC-CCCCcHHHHHHHHHHHHHHHHCCCCCCCC
Confidence 2 2334567999999999876 46999999999999999999999999753
No 13
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=1.2e-41 Score=375.29 Aligned_cols=212 Identities=29% Similarity=0.447 Sum_probs=179.3
Q ss_pred HHHHHHHHhhccccccCcEEEEEEEEcC------CcEEEEEEeccCCc-ccchhhhHHHHHHhhcCC-Cccceeeceeec
Q 003385 597 DIEDATKMLEKKIGSGGFGVVYYGKLKD------GKEIAVKVLTSNSY-QGKREFTNEVTLLSRIHH-RNLVQFLGYCQE 668 (824)
Q Consensus 597 ~~~~~~~~i~~~LG~G~fg~Vy~a~~~~------g~~vAVK~l~~~~~-~~~~~~~~Ei~il~~l~H-pnIv~l~~~~~~ 668 (824)
++....+.+.+.||+|+||+||+|++.. ++.||||+++.... ...+.|.+|+++|.+++| ||||+++|+|.+
T Consensus 60 Ei~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~ 139 (353)
T 4ase_A 60 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTK 139 (353)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECC
T ss_pred EecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEe
Confidence 3445567788999999999999998753 35799999976533 335678999999999965 999999999866
Q ss_pred C-CeEEEEEEecCCCCHHHHhhcccC------------ccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCE
Q 003385 669 E-GRSVLVYEFMHNGTLKEHLYGTLT------------HEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNI 735 (824)
Q Consensus 669 ~-~~~~lV~E~~~~gsL~~~L~~~~~------------~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NI 735 (824)
. +..++|||||++|+|.++|+.... ....+++.+++.++.|||+||+|||++ +||||||||+||
T Consensus 140 ~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHRDLK~~NI 216 (353)
T 4ase_A 140 PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNI 216 (353)
T ss_dssp TTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGE
T ss_pred cCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecCccCccce
Confidence 4 568999999999999999965321 134589999999999999999999998 999999999999
Q ss_pred EEcCCCcEEEEecCCcccccCCCC-ceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHc-CCCCCCCCccc
Q 003385 736 LLDKHMRAKVSDFGLSKFAVDGAS-HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFG 811 (824)
Q Consensus 736 Ll~~~~~vkL~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~ellt-G~~Pf~~~~~~ 811 (824)
|+++++.+||+|||+|+....... ......+||+.|||||++.+..|+.++|||||||++|||+| |+.||.+....
T Consensus 217 Ll~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~ 294 (353)
T 4ase_A 217 LLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID 294 (353)
T ss_dssp EECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS
T ss_pred eeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHH
Confidence 999999999999999986644333 23445679999999999999999999999999999999998 99999876543
No 14
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=1.9e-40 Score=358.35 Aligned_cols=198 Identities=28% Similarity=0.418 Sum_probs=159.1
Q ss_pred HHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCCc-ccchhhhHHHHHHhhcCCCccceeeceeecCC----------
Q 003385 603 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY-QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEG---------- 670 (824)
Q Consensus 603 ~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~-~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~---------- 670 (824)
|++.+.||+|+||+||+|+++ +|+.||||+++.... ...+.+.+|+++|++++|||||++++++.+.+
T Consensus 7 y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~~ 86 (299)
T 4g31_A 7 FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSP 86 (299)
T ss_dssp EEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC----------
T ss_pred CEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccCC
Confidence 567789999999999999976 689999999975432 23467889999999999999999999986544
Q ss_pred --eEEEEEEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEec
Q 003385 671 --RSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDF 748 (824)
Q Consensus 671 --~~~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DF 748 (824)
..++|||||++|+|.+++.... ......+..++.++.||++||+|||++ +|+||||||+|||++.++.+||+||
T Consensus 87 ~~~l~ivmE~~~gg~L~~~l~~~~-~~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vKl~DF 162 (299)
T 4g31_A 87 KVYLYIQMQLCRKENLKDWMNGRC-TIEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDF 162 (299)
T ss_dssp CEEEEEEEECCCSCCHHHHHHTCC-SGGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCC
T ss_pred CcEEEEEEecCCCCcHHHHHHhcC-CCChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEEEccC
Confidence 3689999999999999996542 223345667889999999999999998 9999999999999999999999999
Q ss_pred CCcccccCCCCc-----------eeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCC
Q 003385 749 GLSKFAVDGASH-----------VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISN 807 (824)
Q Consensus 749 Gla~~~~~~~~~-----------~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~ 807 (824)
|+|+........ .....+||+.|||||++.+..|+.++|||||||++|||++ ||.+
T Consensus 163 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~ 229 (299)
T 4g31_A 163 GLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFST 229 (299)
T ss_dssp CCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSS
T ss_pred ccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCC
Confidence 999865443211 1234579999999999999999999999999999999996 7765
No 15
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=6.5e-41 Score=363.09 Aligned_cols=197 Identities=27% Similarity=0.431 Sum_probs=160.6
Q ss_pred HHhhccccccCcEEEEEEEEcCCcEEEEEEeccCCcccchhhhHHHHHHhhcCCCccceeeceeecCC----eEEEEEEe
Q 003385 603 KMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEG----RSVLVYEF 678 (824)
Q Consensus 603 ~~i~~~LG~G~fg~Vy~a~~~~g~~vAVK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~----~~~lV~E~ 678 (824)
+.+.++||+|+||+||+|+++ |+.||||+++..... ...+..|+..+.+++|||||++++++.+++ ..+|||||
T Consensus 5 i~L~~~iG~G~fG~Vy~~~~~-g~~VAvK~l~~~~~~-~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey 82 (303)
T 3hmm_A 5 IVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREER-SWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDY 82 (303)
T ss_dssp EEEEEEEEECSSSEEEEEEET-TEEEEEEEECGGGHH-HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEEC
T ss_pred EEEEEEEeeCCCeEEEEEEEC-CEEEEEEEECccchh-hHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecC
Confidence 456789999999999999985 899999999653221 222345666667889999999999997654 57999999
Q ss_pred cCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCC-----CCCeEecCCCCCCEEEcCCCcEEEEecCCccc
Q 003385 679 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGC-----VPAIIHRDLKSSNILLDKHMRAKVSDFGLSKF 753 (824)
Q Consensus 679 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~-----~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~ 753 (824)
|++|+|.+++.. ..+++..+..++.|++.||+|||+++ .++|+||||||+|||++.++++||+|||+|+.
T Consensus 83 ~~~gsL~~~l~~-----~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~ 157 (303)
T 3hmm_A 83 HEHGSLFDYLNR-----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR 157 (303)
T ss_dssp CTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred CCCCcHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCcc
Confidence 999999999953 45889999999999999999999752 35899999999999999999999999999987
Q ss_pred ccCCCCc---eeccccCCCCCcchhccccC------CCCchHHHHHHHHHHHHHHcCCCCCC
Q 003385 754 AVDGASH---VSSIVRGTVGYLDPEYYISQ------QLTDKSDVYSFGVILLELISGQEAIS 806 (824)
Q Consensus 754 ~~~~~~~---~~~~~~gt~~y~aPE~l~~~------~~~~~~DIwSlGvil~elltG~~Pf~ 806 (824)
....... .....+||+.|||||++.+. .++.++|||||||++|||++|..||.
T Consensus 158 ~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~ 219 (303)
T 3hmm_A 158 HDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGG 219 (303)
T ss_dssp EETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTT
T ss_pred ccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCC
Confidence 6543322 12345799999999998754 36679999999999999999987764
No 16
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=8.7e-40 Score=366.52 Aligned_cols=210 Identities=21% Similarity=0.384 Sum_probs=175.7
Q ss_pred HHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCC--cccchhhhHHHHHHhhcCCCccceeeceeec------CCeE
Q 003385 602 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQE------EGRS 672 (824)
Q Consensus 602 ~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~--~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~------~~~~ 672 (824)
+|.+.+.||+|+||+||+|+++ +|+.||||+++... ....+.+.+|+++|++++|||||++++++.. .+..
T Consensus 55 ~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~ 134 (398)
T 4b99_A 55 EYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSV 134 (398)
T ss_dssp SEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCE
T ss_pred CeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCEE
Confidence 4677889999999999999986 68999999997542 2234568899999999999999999998753 4678
Q ss_pred EEEEEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcc
Q 003385 673 VLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSK 752 (824)
Q Consensus 673 ~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~ 752 (824)
++|||||+ |+|.+++. ....+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+
T Consensus 135 ~ivmE~~~-g~L~~~i~----~~~~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFGla~ 206 (398)
T 4b99_A 135 YVVLDLME-SDLHQIIH----SSQPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMAR 206 (398)
T ss_dssp EEEEECCS-EEHHHHHT----SSSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCB
T ss_pred EEEEeCCC-CCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeecceee
Confidence 99999996 67988884 346789999999999999999999998 99999999999999999999999999998
Q ss_pred cccCCC---CceeccccCCCCCcchhccccC-CCCchHHHHHHHHHHHHHHcCCCCCCCCccccchhcHhh
Q 003385 753 FAVDGA---SHVSSIVRGTVGYLDPEYYISQ-QLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQ 819 (824)
Q Consensus 753 ~~~~~~---~~~~~~~~gt~~y~aPE~l~~~-~~~~~~DIwSlGvil~elltG~~Pf~~~~~~~~~~~iv~ 819 (824)
...... .......+||+.|||||++.+. .++.++||||+||++|||++|+.||.+.+..+....|.+
T Consensus 207 ~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~ 277 (398)
T 4b99_A 207 GLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMM 277 (398)
T ss_dssp CC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHH
T ss_pred ecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHH
Confidence 654321 2233456899999999998875 568999999999999999999999998775555555443
No 17
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=1.2e-38 Score=353.25 Aligned_cols=196 Identities=25% Similarity=0.372 Sum_probs=167.1
Q ss_pred HHHhhccccccCcEEEEEEEEc----CCcEEEEEEeccCCcccchhhhHHHHHHhhc-CCCccceeeceeecCCeEEEEE
Q 003385 602 TKMLEKKIGSGGFGVVYYGKLK----DGKEIAVKVLTSNSYQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVY 676 (824)
Q Consensus 602 ~~~i~~~LG~G~fg~Vy~a~~~----~g~~vAVK~l~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~lV~ 676 (824)
.|.+.++||+|+||+||+|+++ .++.||||++.... ...++.+|+++|+++ +||||+++++++.+.++.++||
T Consensus 22 ~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvm 99 (361)
T 4f9c_A 22 VFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAM 99 (361)
T ss_dssp TCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEE
T ss_pred cEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEE
Confidence 4667889999999999999864 46789999986543 345678999999998 6999999999999999999999
Q ss_pred EecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCC-CcEEEEecCCccccc
Q 003385 677 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKH-MRAKVSDFGLSKFAV 755 (824)
Q Consensus 677 E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~-~~vkL~DFGla~~~~ 755 (824)
||+++|+|.+++. .+++.++..++.|++.||+|||++ ||+||||||+|||++.+ +++||+|||+|+...
T Consensus 100 E~~~g~~L~~~~~-------~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~ 169 (361)
T 4f9c_A 100 PYLEHESFLDILN-------SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTH 169 (361)
T ss_dssp ECCCCCCHHHHHT-------TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCEECT
T ss_pred eCCCcccHHHHHc-------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEEECcCCCCcccC
Confidence 9999999999883 378889999999999999999998 99999999999999877 899999999997543
Q ss_pred CCCC---------------------------ceeccccCCCCCcchhccccC-CCCchHHHHHHHHHHHHHHcCCCCCCC
Q 003385 756 DGAS---------------------------HVSSIVRGTVGYLDPEYYISQ-QLTDKSDVYSFGVILLELISGQEAISN 807 (824)
Q Consensus 756 ~~~~---------------------------~~~~~~~gt~~y~aPE~l~~~-~~~~~~DIwSlGvil~elltG~~Pf~~ 807 (824)
+... ......+||+.|||||++.+. .|+.++||||+||++|||++|+.||..
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~ 249 (361)
T 4f9c_A 170 DTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYK 249 (361)
T ss_dssp TCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSC
T ss_pred CccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCC
Confidence 3211 112345799999999999875 589999999999999999999999965
Q ss_pred Cc
Q 003385 808 EK 809 (824)
Q Consensus 808 ~~ 809 (824)
..
T Consensus 250 ~~ 251 (361)
T 4f9c_A 250 AS 251 (361)
T ss_dssp CS
T ss_pred CC
Confidence 43
No 18
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=1.2e-38 Score=372.78 Aligned_cols=197 Identities=28% Similarity=0.399 Sum_probs=169.3
Q ss_pred HHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCCc---ccchhhhH---HHHHHhhcCCCccceeeceeecCCeEEEE
Q 003385 603 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY---QGKREFTN---EVTLLSRIHHRNLVQFLGYCQEEGRSVLV 675 (824)
Q Consensus 603 ~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~---~~~~~~~~---Ei~il~~l~HpnIv~l~~~~~~~~~~~lV 675 (824)
|.+.+.||+|+||+||+|+++ +|+.||||++++... .....+.+ ++++++.++|||||++++++.+.+..++|
T Consensus 191 f~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~lylV 270 (689)
T 3v5w_A 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFI 270 (689)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEEE
T ss_pred eEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEEEE
Confidence 446789999999999999986 689999999975321 11222333 45666777899999999999999999999
Q ss_pred EEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCccccc
Q 003385 676 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAV 755 (824)
Q Consensus 676 ~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~ 755 (824)
||||+||+|.++|.. ...+++..+..++.||+.||+|||++ |||||||||+|||++.+|++||+|||+|+...
T Consensus 271 mEy~~GGdL~~~l~~----~~~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~ 343 (689)
T 3v5w_A 271 LDLMNGGDLHYHLSQ----HGVFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFS 343 (689)
T ss_dssp ECCCCSCBHHHHHHH----HCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred EecCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEecccceeeecC
Confidence 999999999999853 45689999999999999999999998 99999999999999999999999999998764
Q ss_pred CCCCceeccccCCCCCcchhcccc-CCCCchHHHHHHHHHHHHHHcCCCCCCCCc
Q 003385 756 DGASHVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEK 809 (824)
Q Consensus 756 ~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~~DIwSlGvil~elltG~~Pf~~~~ 809 (824)
... ....+||+.|||||++.. ..|+.++|+||+||++|||++|+.||.+..
T Consensus 344 ~~~---~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~ 395 (689)
T 3v5w_A 344 KKK---PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHK 395 (689)
T ss_dssp SCC---CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGG
T ss_pred CCC---CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 432 345689999999999975 579999999999999999999999997654
No 19
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=1.7e-38 Score=372.77 Aligned_cols=208 Identities=25% Similarity=0.416 Sum_probs=182.2
Q ss_pred HHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCCcccchhhhHHHHHHhhcCCCccceeeceeecCCeEEEEEEecC
Q 003385 602 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 680 (824)
Q Consensus 602 ~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~~ 680 (824)
.|.+.+.||+|+||+||+|+++ +|+.||+|++........+.+.+|+++|++++|||||++++++.+.+..++|||||+
T Consensus 158 ~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~~ 237 (573)
T 3uto_A 158 HYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMS 237 (573)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred ccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeecC
Confidence 3667899999999999999886 689999999987655556778999999999999999999999999999999999999
Q ss_pred CCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCC--CcEEEEecCCcccccCCC
Q 003385 681 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKH--MRAKVSDFGLSKFAVDGA 758 (824)
Q Consensus 681 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~--~~vkL~DFGla~~~~~~~ 758 (824)
+|+|.+++.. ....+++.++..++.||+.||+|||++ +|+||||||+|||++.+ +.+||+|||+|+......
T Consensus 238 gg~L~~~i~~---~~~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~ 311 (573)
T 3uto_A 238 GGELFEKVAD---EHNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ 311 (573)
T ss_dssp CCBHHHHHTC---TTSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTS
T ss_pred CCcHHHHHHH---hCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeeccceeEccCCC
Confidence 9999998843 235688999999999999999999998 99999999999999864 899999999998765432
Q ss_pred CceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCCCccccchhcH
Q 003385 759 SHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNI 817 (824)
Q Consensus 759 ~~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~~~~~~~~~~i 817 (824)
.....+||+.|||||++.+..|+.++||||+||++|||++|+.||.+....+.+..|
T Consensus 312 --~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i 368 (573)
T 3uto_A 312 --SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNV 368 (573)
T ss_dssp --EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHH
T ss_pred --ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHH
Confidence 334567999999999999999999999999999999999999999876544443333
No 20
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=3.3e-36 Score=342.32 Aligned_cols=211 Identities=25% Similarity=0.336 Sum_probs=181.7
Q ss_pred HHhhccccccCcEEEEEEEEcC-CcEEEEEEeccCCc---ccchhhhHHHHHHhhcCCCccceeeceeecCCeEEEEEEe
Q 003385 603 KMLEKKIGSGGFGVVYYGKLKD-GKEIAVKVLTSNSY---QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 678 (824)
Q Consensus 603 ~~i~~~LG~G~fg~Vy~a~~~~-g~~vAVK~l~~~~~---~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~ 678 (824)
+.+.++||+|+||+||+|+++. ++.||||++++... ...+.+.+|+.++..++||||+++++++.+.+..++||||
T Consensus 76 y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV~Ey 155 (437)
T 4aw2_A 76 FEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDY 155 (437)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECC
T ss_pred eEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEEEec
Confidence 4567899999999999999874 78899999975321 2234588999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccccCCC
Q 003385 679 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 758 (824)
Q Consensus 679 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~ 758 (824)
+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++++||+|||+++......
T Consensus 156 ~~gg~L~~~l~~~---~~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~ 229 (437)
T 4aw2_A 156 YVGGDLLTLLSKF---EDRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG 229 (437)
T ss_dssp CTTCBHHHHHHTT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTTS
T ss_pred CCCCcHHHHHHHc---cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCEEEcchhhhhhcccCC
Confidence 9999999998542 45689999999999999999999998 99999999999999999999999999998665544
Q ss_pred CceeccccCCCCCcchhccc-----cCCCCchHHHHHHHHHHHHHHcCCCCCCCCccccchhcHhh
Q 003385 759 SHVSSIVRGTVGYLDPEYYI-----SQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQ 819 (824)
Q Consensus 759 ~~~~~~~~gt~~y~aPE~l~-----~~~~~~~~DIwSlGvil~elltG~~Pf~~~~~~~~~~~iv~ 819 (824)
.......+||+.|+|||++. ...++.++|||||||++|||++|+.||.+....+.+.+|++
T Consensus 230 ~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~ 295 (437)
T 4aw2_A 230 TVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN 295 (437)
T ss_dssp CEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHT
T ss_pred CcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhh
Confidence 44445567999999999987 46789999999999999999999999988765555555544
No 21
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=3.5e-36 Score=339.45 Aligned_cols=209 Identities=25% Similarity=0.320 Sum_probs=179.9
Q ss_pred HHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCC---cccchhhhHHHHHHhhcCCCccceeeceeecCCeEEEEEEe
Q 003385 603 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 678 (824)
Q Consensus 603 ~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~---~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~ 678 (824)
|.+.+.||+|+||.||+|+++ +++.||+|++++.. ....+.+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus 71 y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~ 150 (410)
T 3v8s_A 71 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEY 150 (410)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred cEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeC
Confidence 455689999999999999987 57899999996532 22345688999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccccCCC
Q 003385 679 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 758 (824)
Q Consensus 679 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~ 758 (824)
+++|+|.+++.. ..+++..+..++.||+.||+|||++ +|+||||||+|||++.++++||+|||+++......
T Consensus 151 ~~gg~L~~~l~~-----~~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~ 222 (410)
T 3v8s_A 151 MPGGDLVNLMSN-----YDVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG 222 (410)
T ss_dssp CTTEEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTTS
T ss_pred CCCCcHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEEeccceeEeeccCC
Confidence 999999998843 3578889999999999999999998 99999999999999999999999999998765443
Q ss_pred CceeccccCCCCCcchhccccCC----CCchHHHHHHHHHHHHHHcCCCCCCCCccccchhcHhh
Q 003385 759 SHVSSIVRGTVGYLDPEYYISQQ----LTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQ 819 (824)
Q Consensus 759 ~~~~~~~~gt~~y~aPE~l~~~~----~~~~~DIwSlGvil~elltG~~Pf~~~~~~~~~~~iv~ 819 (824)
.......+||+.|+|||++.... ++.++|||||||++|||++|+.||.+....+.+.+|++
T Consensus 223 ~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~ 287 (410)
T 3v8s_A 223 MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMN 287 (410)
T ss_dssp EEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHT
T ss_pred cccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHh
Confidence 33445677999999999998765 78899999999999999999999987665555555544
No 22
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=6.2e-36 Score=330.24 Aligned_cols=203 Identities=23% Similarity=0.406 Sum_probs=168.4
Q ss_pred HHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCC-cccchhhhHHHHHHhhcCCCccceeeceeecCCeEEEEEEec
Q 003385 602 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 679 (824)
Q Consensus 602 ~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~ 679 (824)
.|.+.+.||+|+||.||+|++. +|+.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 11 ~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~ 90 (347)
T 3zgw_A 11 YYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYC 90 (347)
T ss_dssp TEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred CeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEEeCC
Confidence 4567789999999999999875 78999999997543 233567889999999999999999999999999999999999
Q ss_pred CCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccccCCCC
Q 003385 680 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 759 (824)
Q Consensus 680 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~~ 759 (824)
++|+|.+++.. ...+++..+..++.|++.||+|||++ +|+||||||+|||+++++.+||+|||++........
T Consensus 91 ~gg~L~~~l~~----~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~ 163 (347)
T 3zgw_A 91 PGGELFDYIIS----QDRLSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKD 163 (347)
T ss_dssp TTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC------
T ss_pred CCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEEEeccCcccccCCCC
Confidence 99999998843 35689999999999999999999998 999999999999999999999999999876554433
Q ss_pred ceeccccCCCCCcchhccccCCC-CchHHHHHHHHHHHHHHcCCCCCCCCccc
Q 003385 760 HVSSIVRGTVGYLDPEYYISQQL-TDKSDVYSFGVILLELISGQEAISNEKFG 811 (824)
Q Consensus 760 ~~~~~~~gt~~y~aPE~l~~~~~-~~~~DIwSlGvil~elltG~~Pf~~~~~~ 811 (824)
......+||+.|+|||++.+..+ +.++||||+||++|||++|+.||.+....
T Consensus 164 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~ 216 (347)
T 3zgw_A 164 YHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVM 216 (347)
T ss_dssp --------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred ccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHH
Confidence 33455679999999999988775 88999999999999999999999876533
No 23
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=1.4e-35 Score=320.26 Aligned_cols=199 Identities=26% Similarity=0.425 Sum_probs=176.7
Q ss_pred HHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCCcccchhhhHHHHHHhhcCCCccceeeceeecCCeEEEEEEecC
Q 003385 602 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 680 (824)
Q Consensus 602 ~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~~ 680 (824)
+|.+.+.||+|+||.||+|.+. +++.||||++........+.+.+|+.++++++||||+++++++...+..++||||++
T Consensus 21 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~ 100 (297)
T 3fxz_A 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLA 100 (297)
T ss_dssp TBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred ceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEECCC
Confidence 4556789999999999999864 689999999976655556778999999999999999999999999999999999999
Q ss_pred CCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccccCCCCc
Q 003385 681 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 760 (824)
Q Consensus 681 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~~~ 760 (824)
+|+|.+++.. ..+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||++........
T Consensus 101 ~~~L~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 171 (297)
T 3fxz_A 101 GGSLTDVVTE-----TCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS- 171 (297)
T ss_dssp TCBHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTC-
T ss_pred CCCHHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCceecCCccc-
Confidence 9999998853 3578899999999999999999998 999999999999999999999999999876544332
Q ss_pred eeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCCCc
Q 003385 761 VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEK 809 (824)
Q Consensus 761 ~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~~~ 809 (824)
......||+.|+|||++.+..++.++||||+||++|||++|+.||.+..
T Consensus 172 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~ 220 (297)
T 3fxz_A 172 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNEN 220 (297)
T ss_dssp CBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred ccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 2334569999999999999999999999999999999999999997643
No 24
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=1.4e-35 Score=326.11 Aligned_cols=199 Identities=27% Similarity=0.384 Sum_probs=174.5
Q ss_pred HHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCC---cccchhhhHHHHHHhhcCCCccceeeceeecCCeEEEEEEe
Q 003385 603 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 678 (824)
Q Consensus 603 ~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~---~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~ 678 (824)
+.+.+.||+|+||.||+|+.+ +++.||+|++++.. ....+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 7 y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~E~ 86 (337)
T 1o6l_A 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEY 86 (337)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred eEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEEeC
Confidence 456789999999999999886 68999999997542 22345678899999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccccCCC
Q 003385 679 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 758 (824)
Q Consensus 679 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~ 758 (824)
+++|+|.+++.. ...+++..+..++.||+.||+|||++ +|+||||||+|||++.++++||+|||+++......
T Consensus 87 ~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 159 (337)
T 1o6l_A 87 ANGGELFFHLSR----ERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG 159 (337)
T ss_dssp CTTCBHHHHHHH----HSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTT
T ss_pred CCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeeccchhhcccCC
Confidence 999999998843 45688999999999999999999998 99999999999999999999999999997543222
Q ss_pred CceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCCCc
Q 003385 759 SHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEK 809 (824)
Q Consensus 759 ~~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~~~ 809 (824)
......+||+.|+|||++.+..++.++|||||||++|||++|+.||.+..
T Consensus 160 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~ 209 (337)
T 1o6l_A 160 -ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD 209 (337)
T ss_dssp -CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred -CcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCC
Confidence 22345679999999999999999999999999999999999999998755
No 25
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=1.4e-35 Score=324.98 Aligned_cols=200 Identities=28% Similarity=0.467 Sum_probs=175.5
Q ss_pred HHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCC--cccchhhhHHHHHHhhcCCCccceeeceeecCCeEEEEEEec
Q 003385 603 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 679 (824)
Q Consensus 603 ~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~--~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~ 679 (824)
|.+.+.||+|+||.||+|++. +|+.||||++.... ....+.+.+|+++++.++||||+++++++.+.+..++||||+
T Consensus 17 y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~ 96 (328)
T 3fe3_A 17 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYA 96 (328)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred EEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEECC
Confidence 567789999999999999984 78999999996542 233456889999999999999999999999999999999999
Q ss_pred CCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccccCCCC
Q 003385 680 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 759 (824)
Q Consensus 680 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~~ 759 (824)
++|+|.+++.. ...+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++......
T Consensus 97 ~~~~L~~~l~~----~~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~- 168 (328)
T 3fe3_A 97 SGGEVFDYLVA----HGRMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG- 168 (328)
T ss_dssp TTCBHHHHHHH----HCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSC-
T ss_pred CCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccCceecCCCC-
Confidence 99999998853 35688999999999999999999998 99999999999999999999999999997654332
Q ss_pred ceeccccCCCCCcchhccccCCCC-chHHHHHHHHHHHHHHcCCCCCCCCccc
Q 003385 760 HVSSIVRGTVGYLDPEYYISQQLT-DKSDVYSFGVILLELISGQEAISNEKFG 811 (824)
Q Consensus 760 ~~~~~~~gt~~y~aPE~l~~~~~~-~~~DIwSlGvil~elltG~~Pf~~~~~~ 811 (824)
.....+||+.|+|||++.+..++ .++||||+||++|||++|+.||.+....
T Consensus 169 -~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~ 220 (328)
T 3fe3_A 169 -KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLK 220 (328)
T ss_dssp -GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred -ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHH
Confidence 23456799999999999988876 7899999999999999999999876533
No 26
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.1e-35 Score=335.71 Aligned_cols=211 Identities=26% Similarity=0.308 Sum_probs=181.2
Q ss_pred HHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCC---cccchhhhHHHHHHhhcCCCccceeeceeecCCeEEEEEEe
Q 003385 603 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 678 (824)
Q Consensus 603 ~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~---~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~ 678 (824)
+.+.+.||+|+||.||+|+++ +++.||||++++.. ....+.+.+|..++.+++||||+++++++.+.+..++||||
T Consensus 63 f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lVmE~ 142 (412)
T 2vd5_A 63 FEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEY 142 (412)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECC
T ss_pred EEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEcC
Confidence 456789999999999999986 68999999997532 22345688999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccccCCC
Q 003385 679 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 758 (824)
Q Consensus 679 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~ 758 (824)
+++|+|.+++... ...+++..+..++.||+.||+|||++ +|+||||||+|||++.++++||+|||+++......
T Consensus 143 ~~gg~L~~~l~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~vkL~DFGla~~~~~~~ 216 (412)
T 2vd5_A 143 YVGGDLLTLLSKF---GERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADG 216 (412)
T ss_dssp CCSCBHHHHHHHH---SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTTS
T ss_pred CCCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCEEEeechhheeccCCC
Confidence 9999999998532 24688999999999999999999998 99999999999999999999999999998765443
Q ss_pred CceeccccCCCCCcchhccc-------cCCCCchHHHHHHHHHHHHHHcCCCCCCCCccccchhcHhh
Q 003385 759 SHVSSIVRGTVGYLDPEYYI-------SQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQ 819 (824)
Q Consensus 759 ~~~~~~~~gt~~y~aPE~l~-------~~~~~~~~DIwSlGvil~elltG~~Pf~~~~~~~~~~~iv~ 819 (824)
.......+||+.|+|||++. ...++.++|||||||++|||++|+.||.+....+.+.+|++
T Consensus 217 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~ 284 (412)
T 2vd5_A 217 TVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVH 284 (412)
T ss_dssp CEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHT
T ss_pred ccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHh
Confidence 33344567999999999987 35689999999999999999999999988765555555554
No 27
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=8.1e-36 Score=330.21 Aligned_cols=205 Identities=28% Similarity=0.403 Sum_probs=173.1
Q ss_pred HHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCC---cccchhhhHHHHHHhhc-CCCccceeeceeecCCeEEEEE
Q 003385 602 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVY 676 (824)
Q Consensus 602 ~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~---~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~lV~ 676 (824)
.|.+.+.||+|+||.||+|+++ +++.||||++++.. ....+.+.+|.++++.+ +||||+++++++.+.+..++||
T Consensus 24 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lv~ 103 (353)
T 3txo_A 24 NFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVM 103 (353)
T ss_dssp CEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred heEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEEEE
Confidence 4567789999999999999986 58899999997542 22345577899999988 6999999999999999999999
Q ss_pred EecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccccC
Q 003385 677 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVD 756 (824)
Q Consensus 677 E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~~ 756 (824)
||+++|+|.+++.. ...+++..+..++.||+.||+|||++ +|+||||||+|||++.++++||+|||+++....
T Consensus 104 E~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~ 176 (353)
T 3txo_A 104 EFVNGGDLMFHIQK----SRRFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIC 176 (353)
T ss_dssp ECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC
T ss_pred eCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEccccceeeccc
Confidence 99999999998843 45688999999999999999999998 999999999999999999999999999975332
Q ss_pred CCCceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCCCccccch
Q 003385 757 GASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANC 814 (824)
Q Consensus 757 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~~~~~~~~ 814 (824)
. .......+||+.|+|||++.+..++.++||||+||++|||++|+.||.+....+..
T Consensus 177 ~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~ 233 (353)
T 3txo_A 177 N-GVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLF 233 (353)
T ss_dssp ----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH
T ss_pred C-CccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHH
Confidence 2 22334567999999999999999999999999999999999999999876544333
No 28
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=2.4e-35 Score=321.37 Aligned_cols=204 Identities=48% Similarity=0.821 Sum_probs=179.8
Q ss_pred HHhhccccccCcEEEEEEEEcCCcEEEEEEeccCCcccchhhhHHHHHHhhcCCCccceeeceeecCCeEEEEEEecCCC
Q 003385 603 KMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNG 682 (824)
Q Consensus 603 ~~i~~~LG~G~fg~Vy~a~~~~g~~vAVK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~~~g 682 (824)
|.+.+.||+|+||.||+|++++++.||||++........+.+.+|++++++++||||+++++++.+.+..++||||+++|
T Consensus 41 y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 120 (321)
T 2qkw_B 41 FDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENG 120 (321)
T ss_dssp CSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEEECCTTC
T ss_pred cCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEEcCCCC
Confidence 44668899999999999998889999999987665555678899999999999999999999999999999999999999
Q ss_pred CHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccccCCC-Cce
Q 003385 683 TLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA-SHV 761 (824)
Q Consensus 683 sL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~-~~~ 761 (824)
+|.+++.........+++..++.++.|++.||.|||++ +|+||||||+||+++.++.+||+|||+++...... ...
T Consensus 121 ~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 197 (321)
T 2qkw_B 121 NLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHL 197 (321)
T ss_dssp BTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEECCCTTCEECSSSSCCCC
T ss_pred cHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEEeeccccccccccccccc
Confidence 99999865544445689999999999999999999998 99999999999999999999999999997643322 222
Q ss_pred eccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCCCc
Q 003385 762 SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEK 809 (824)
Q Consensus 762 ~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~~~ 809 (824)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||.+..
T Consensus 198 ~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~ 245 (321)
T 2qkw_B 198 STVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSL 245 (321)
T ss_dssp BCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSS
T ss_pred ccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccC
Confidence 334458999999999999999999999999999999999999997654
No 29
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=1.8e-35 Score=322.84 Aligned_cols=214 Identities=42% Similarity=0.749 Sum_probs=185.4
Q ss_pred cCHHHHHH--HHHHhhccccccCcEEEEEEEEcCCcEEEEEEeccCCcc-cchhhhHHHHHHhhcCCCccceeeceeecC
Q 003385 593 FTLSDIED--ATKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQ-GKREFTNEVTLLSRIHHRNLVQFLGYCQEE 669 (824)
Q Consensus 593 ~~~~~~~~--~~~~i~~~LG~G~fg~Vy~a~~~~g~~vAVK~l~~~~~~-~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~ 669 (824)
++..++.. ..|.+.+.||+|+||.||+|++++++.||||+++..... ....+.+|++++++++||||+++++++.+.
T Consensus 20 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~ 99 (326)
T 3uim_A 20 FSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTP 99 (326)
T ss_dssp CCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEECCS
T ss_pred ecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEecC
Confidence 44455443 345667899999999999999888999999999765332 344689999999999999999999999999
Q ss_pred CeEEEEEEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecC
Q 003385 670 GRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFG 749 (824)
Q Consensus 670 ~~~~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFG 749 (824)
+..++||||+++|+|.+++.........+++..+..++.|++.||+|||+++.++|+||||||+|||++.++.+||+|||
T Consensus 100 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg 179 (326)
T 3uim_A 100 TERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFG 179 (326)
T ss_dssp SCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECCCS
T ss_pred CceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEeccCc
Confidence 99999999999999999997765566679999999999999999999999765689999999999999999999999999
Q ss_pred CcccccCCCCceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCC
Q 003385 750 LSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAIS 806 (824)
Q Consensus 750 la~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~ 806 (824)
+++..............||+.|+|||.+.+..++.++|||||||++|||++|+.||+
T Consensus 180 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~ 236 (326)
T 3uim_A 180 LAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD 236 (326)
T ss_dssp SCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBC
T ss_pred cccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCccc
Confidence 998765544445555669999999999999999999999999999999999999996
No 30
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=9.8e-35 Score=314.83 Aligned_cols=200 Identities=30% Similarity=0.530 Sum_probs=175.0
Q ss_pred HHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCCcccchhhhHHHHHHhhcCCCccceeeceeecCCeEEEEEEecC
Q 003385 602 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 680 (824)
Q Consensus 602 ~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~~ 680 (824)
.+.+.+.||+|+||.||+|++. +++.||+|++........+.+.+|++++++++||||+++++++.+.+..++||||++
T Consensus 11 ~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~ 90 (310)
T 3s95_A 11 DLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIK 90 (310)
T ss_dssp GEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred HeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEecC
Confidence 3456789999999999999986 588999999876665667789999999999999999999999999999999999999
Q ss_pred CCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccccCCCCc
Q 003385 681 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 760 (824)
Q Consensus 681 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~~~ 760 (824)
+|+|.+++... ...+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++........
T Consensus 91 ~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 164 (310)
T 3s95_A 91 GGTLRGIIKSM---DSQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQ 164 (310)
T ss_dssp TCBHHHHHHHC---CTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEECC-----
T ss_pred CCcHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccceeccccccc
Confidence 99999998642 45688999999999999999999998 9999999999999999999999999999765432221
Q ss_pred e-------------eccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCC
Q 003385 761 V-------------SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISN 807 (824)
Q Consensus 761 ~-------------~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~ 807 (824)
. .....||+.|+|||++.+..++.++|||||||++|||++|..||..
T Consensus 165 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~ 224 (310)
T 3s95_A 165 PEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPD 224 (310)
T ss_dssp ---------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTT
T ss_pred ccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcc
Confidence 1 1145699999999999999999999999999999999999999865
No 31
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=3.1e-35 Score=316.83 Aligned_cols=202 Identities=27% Similarity=0.450 Sum_probs=170.9
Q ss_pred HHHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCCcc---cchhhhHHHHHHhhcCCCccceeeceeecCCeEEEEE
Q 003385 601 ATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ---GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVY 676 (824)
Q Consensus 601 ~~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~~---~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~ 676 (824)
.+|.+.+.||+|+||.||+|++. +++.||+|++...... ..+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 90 (294)
T 4eqm_A 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVM 90 (294)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEE
Confidence 35667899999999999999876 6889999998644322 2356889999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccccC
Q 003385 677 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVD 756 (824)
Q Consensus 677 E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~~ 756 (824)
||+++++|.+++.. ...+++..+..++.|++.||+|||++ +|+||||||+|||++.++++||+|||+++....
T Consensus 91 e~~~g~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 163 (294)
T 4eqm_A 91 EYIEGPTLSEYIES----HGPLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSE 163 (294)
T ss_dssp ECCCSCBHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSSSTTC--
T ss_pred eCCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCCcccccc
Confidence 99999999999853 34688999999999999999999998 999999999999999999999999999986654
Q ss_pred CCCceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCCCc
Q 003385 757 GASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEK 809 (824)
Q Consensus 757 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~~~ 809 (824)
..........||+.|+|||.+.+..++.++||||+||++|||++|+.||.+..
T Consensus 164 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~ 216 (294)
T 4eqm_A 164 TSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGET 216 (294)
T ss_dssp -----------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSC
T ss_pred ccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC
Confidence 43333444569999999999999999999999999999999999999998754
No 32
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=3.1e-35 Score=320.85 Aligned_cols=198 Identities=28% Similarity=0.469 Sum_probs=174.4
Q ss_pred HHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCCc---ccchhhhHHHHHHhhcCCCccceeeceeecCCeEEEEEEe
Q 003385 603 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY---QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 678 (824)
Q Consensus 603 ~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~---~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~ 678 (824)
|.+.+.||+|+||.||+|+.+ +|+.||+|+++.... ...+.+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus 8 y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~e~ 87 (318)
T 1fot_A 8 FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDY 87 (318)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEECC
T ss_pred cEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEEeC
Confidence 456789999999999999886 689999999975421 2345677899999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccccCCC
Q 003385 679 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 758 (824)
Q Consensus 679 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~ 758 (824)
+++|+|.+++.. ...+++..+..++.||+.||+|||++ +|+||||||+|||++.++++||+|||+++....
T Consensus 88 ~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~-- 158 (318)
T 1fot_A 88 IEGGELFSLLRK----SQRFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPD-- 158 (318)
T ss_dssp CCSCBHHHHHHH----TSSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECSS--
T ss_pred CCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecCcceecCC--
Confidence 999999999853 35688899999999999999999998 999999999999999999999999999986532
Q ss_pred CceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCCCccc
Q 003385 759 SHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFG 811 (824)
Q Consensus 759 ~~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~~~~~ 811 (824)
.....+||+.|+|||++.+..++.++||||+||++|||++|+.||.+....
T Consensus 159 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~ 209 (318)
T 1fot_A 159 --VTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTM 209 (318)
T ss_dssp --CBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH
T ss_pred --ccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH
Confidence 223457999999999999999999999999999999999999999875533
No 33
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=7.1e-35 Score=323.62 Aligned_cols=201 Identities=27% Similarity=0.411 Sum_probs=176.0
Q ss_pred HHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCCcc------cchhhhHHHHHHhhcCCCccceeeceeecCCeEEE
Q 003385 602 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ------GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVL 674 (824)
Q Consensus 602 ~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~~------~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~l 674 (824)
.|.+.+.||+|+||.||+|+++ +|+.||+|+++..... ..+.+.+|++++++++||||+++++++.+.+..++
T Consensus 13 ~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 92 (361)
T 2yab_A 13 FYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVL 92 (361)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEEEE
Confidence 3567889999999999999986 6899999999764322 23568899999999999999999999999999999
Q ss_pred EEEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCC----cEEEEecCC
Q 003385 675 VYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHM----RAKVSDFGL 750 (824)
Q Consensus 675 V~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~----~vkL~DFGl 750 (824)
||||+++|+|.+++.. ...+++..+..++.||+.||.|||++ ||+||||||+|||++.++ .+||+|||+
T Consensus 93 v~e~~~gg~L~~~l~~----~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~vkl~DFG~ 165 (361)
T 2yab_A 93 ILELVSGGELFDFLAQ----KESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165 (361)
T ss_dssp EEECCCSCBHHHHHTT----CSCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCSS
T ss_pred EEEcCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCEEEEecCC
Confidence 9999999999999843 45688999999999999999999998 999999999999998876 799999999
Q ss_pred cccccCCCCceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCCCccc
Q 003385 751 SKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFG 811 (824)
Q Consensus 751 a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~~~~~ 811 (824)
++...... .....+||+.|+|||++....++.++||||+||++|+|++|..||.+....
T Consensus 166 a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~ 224 (361)
T 2yab_A 166 AHEIEDGV--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ 224 (361)
T ss_dssp CEECCTTC--CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH
T ss_pred ceEcCCCC--ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 98664432 223456999999999999999999999999999999999999999875533
No 34
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=1.3e-34 Score=316.31 Aligned_cols=196 Identities=27% Similarity=0.454 Sum_probs=174.7
Q ss_pred hhccccccCcEEEEEEEEc-CCcEEEEEEeccCCcccchhhhHHHHHHhhcCCCccceeeceeecCCeEEEEEEecCCCC
Q 003385 605 LEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNGT 683 (824)
Q Consensus 605 i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~~~gs 683 (824)
..++||+|+||.||+|+.+ +|+.||||++........+.+.+|+.++++++||||+++++++...+..++||||+++++
T Consensus 49 ~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 128 (321)
T 2c30_A 49 SYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGA 128 (321)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECCCCSCB
T ss_pred ccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEecCCCCC
Confidence 3568999999999999987 799999999986665556778899999999999999999999999999999999999999
Q ss_pred HHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccccCCCCceec
Q 003385 684 LKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHVSS 763 (824)
Q Consensus 684 L~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~ 763 (824)
|.+++. ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++....... ...
T Consensus 129 L~~~l~-----~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~-~~~ 199 (321)
T 2c30_A 129 LTDIVS-----QVRLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP-KRK 199 (321)
T ss_dssp HHHHHT-----TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSC-CBC
T ss_pred HHHHHH-----hcCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCcEEEeeeeeeeecccCcc-ccc
Confidence 999884 24588999999999999999999998 999999999999999999999999999876544322 223
Q ss_pred cccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCCCc
Q 003385 764 IVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEK 809 (824)
Q Consensus 764 ~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~~~ 809 (824)
...||+.|+|||++.+..++.++|||||||++|||++|+.||.+..
T Consensus 200 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~ 245 (321)
T 2c30_A 200 SLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDS 245 (321)
T ss_dssp CCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred cccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 4569999999999999999999999999999999999999997644
No 35
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=3.9e-35 Score=323.70 Aligned_cols=202 Identities=29% Similarity=0.458 Sum_probs=175.1
Q ss_pred HHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCC---cccchhhhHHHHHHhhc-CCCccceeeceeecCCeEEEEE
Q 003385 602 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVY 676 (824)
Q Consensus 602 ~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~---~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~lV~ 676 (824)
.|.+.+.||+|+||.||+|+++ +++.||||+++... ....+.+..|..++..+ +||||+++++++.+.+..++||
T Consensus 18 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~lv~ 97 (345)
T 1xjd_A 18 DFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVM 97 (345)
T ss_dssp TEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEE
T ss_pred HeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEEEE
Confidence 4557789999999999999986 58899999997542 22345577899999887 8999999999999999999999
Q ss_pred EecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccccC
Q 003385 677 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVD 756 (824)
Q Consensus 677 E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~~ 756 (824)
||+++|+|.+++.. ...+++..+..++.||+.||+|||++ +|+||||||+|||++.++++||+|||+++....
T Consensus 98 E~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 170 (345)
T 1xjd_A 98 EYLNGGDLMYHIQS----CHKFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKENML 170 (345)
T ss_dssp ECCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred eCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEeEChhhhhccc
Confidence 99999999999853 35688999999999999999999998 999999999999999999999999999975433
Q ss_pred CCCceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCCCccc
Q 003385 757 GASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFG 811 (824)
Q Consensus 757 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~~~~~ 811 (824)
.. ......+||+.|+|||++.+..++.++||||+||++|||++|+.||.+....
T Consensus 171 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~ 224 (345)
T 1xjd_A 171 GD-AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEE 224 (345)
T ss_dssp TT-CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred CC-CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHH
Confidence 22 2234567999999999999999999999999999999999999999876533
No 36
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=6.1e-35 Score=322.89 Aligned_cols=206 Identities=23% Similarity=0.327 Sum_probs=177.3
Q ss_pred HHHHHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCC-----cccchhhhHHHHHHhhcCCCccceeeceeecCCeE
Q 003385 599 EDATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS-----YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRS 672 (824)
Q Consensus 599 ~~~~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~-----~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ 672 (824)
....|.+.+.||+|+||.||+|.++ +++.||||++.... ....+.+.+|++++++++||||+++++++.+.+..
T Consensus 22 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 101 (351)
T 3c0i_A 22 FEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGML 101 (351)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEE
T ss_pred cccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 3456788899999999999999876 68999999986432 12346789999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCc---EEEEecC
Q 003385 673 VLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMR---AKVSDFG 749 (824)
Q Consensus 673 ~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~---vkL~DFG 749 (824)
++||||+++++|.+.+.........+++..+..++.||+.||+|||++ +|+||||||+|||++.++. +||+|||
T Consensus 102 ~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg 178 (351)
T 3c0i_A 102 YMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFG 178 (351)
T ss_dssp EEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEEECCCT
T ss_pred EEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEEEecCc
Confidence 999999999999988855433445688999999999999999999998 9999999999999987654 9999999
Q ss_pred CcccccCCCCceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCCC
Q 003385 750 LSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNE 808 (824)
Q Consensus 750 la~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~~ 808 (824)
+++...... .......||+.|+|||++.+..++.++||||+||++|||++|+.||.+.
T Consensus 179 ~a~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~ 236 (351)
T 3c0i_A 179 VAIQLGESG-LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGT 236 (351)
T ss_dssp TCEECCTTS-CBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSS
T ss_pred ceeEecCCC-eeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCc
Confidence 998664432 2233456999999999999999999999999999999999999999764
No 37
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=7.3e-35 Score=319.00 Aligned_cols=201 Identities=26% Similarity=0.411 Sum_probs=166.2
Q ss_pred HHHhhccccccCcEEEEEEEE----cCCcEEEEEEeccCC----cccchhhhHHHHHHhhcCCCccceeeceeecCCeEE
Q 003385 602 TKMLEKKIGSGGFGVVYYGKL----KDGKEIAVKVLTSNS----YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSV 673 (824)
Q Consensus 602 ~~~i~~~LG~G~fg~Vy~a~~----~~g~~vAVK~l~~~~----~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 673 (824)
.|.+.+.||+|+||.||+|+. .+++.||+|+++... ......+.+|++++++++||||+++++++.+.+..+
T Consensus 18 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 97 (327)
T 3a62_A 18 CFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLY 97 (327)
T ss_dssp GEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSCEE
T ss_pred HeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEEE
Confidence 456789999999999999987 478999999997542 223456788999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCccc
Q 003385 674 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKF 753 (824)
Q Consensus 674 lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~ 753 (824)
+||||+++++|.+++.. ...+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||+++.
T Consensus 98 lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~ 170 (327)
T 3a62_A 98 LILEYLSGGELFMQLER----EGIFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKE 170 (327)
T ss_dssp EEEECCTTEEHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECCCSCC--
T ss_pred EEEeCCCCCcHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEeCCcccc
Confidence 99999999999998843 34578889999999999999999998 999999999999999999999999999875
Q ss_pred ccCCCCceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCCCcc
Q 003385 754 AVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKF 810 (824)
Q Consensus 754 ~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~~~~ 810 (824)
..... ......+||+.|+|||++.+..++.++|||||||++|||++|+.||.+...
T Consensus 171 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~ 226 (327)
T 3a62_A 171 SIHDG-TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENR 226 (327)
T ss_dssp ---------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred cccCC-ccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCH
Confidence 43322 223345699999999999999999999999999999999999999987553
No 38
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=5.4e-35 Score=323.59 Aligned_cols=204 Identities=27% Similarity=0.354 Sum_probs=175.7
Q ss_pred HHHhhccccccCcEEEEEEEEcC-CcEEEEEEeccCC---cccchhhhHHHHHHhhc-CCCccceeeceeecCCeEEEEE
Q 003385 602 TKMLEKKIGSGGFGVVYYGKLKD-GKEIAVKVLTSNS---YQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVY 676 (824)
Q Consensus 602 ~~~i~~~LG~G~fg~Vy~a~~~~-g~~vAVK~l~~~~---~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~lV~ 676 (824)
.|.+.+.||+|+||.||+|+++. ++.||||+++... ....+.+..|..++..+ +||+|+++++++.+.+..++||
T Consensus 21 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~ 100 (353)
T 2i0e_A 21 DFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 100 (353)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEEEE
T ss_pred HcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEEEE
Confidence 35567899999999999999874 7889999997542 12345577899999887 7999999999999999999999
Q ss_pred EecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccccC
Q 003385 677 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVD 756 (824)
Q Consensus 677 E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~~ 756 (824)
||+++|+|.+++.. ...+++..+..++.||+.||+|||++ ||+||||||+|||++.++++||+|||+++....
T Consensus 101 E~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 173 (353)
T 2i0e_A 101 EYVNGGDLMYHIQQ----VGRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW 173 (353)
T ss_dssp ECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred eCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeCCccccccc
Confidence 99999999999853 34688999999999999999999998 999999999999999999999999999975432
Q ss_pred CCCceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCCCccccc
Q 003385 757 GASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGAN 813 (824)
Q Consensus 757 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~~~~~~~ 813 (824)
.. ......+||+.|+|||++.+..++.++|||||||++|||++|+.||.+....+.
T Consensus 174 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~ 229 (353)
T 2i0e_A 174 DG-VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDEL 229 (353)
T ss_dssp TT-CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred CC-cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHH
Confidence 22 233456799999999999999999999999999999999999999987654333
No 39
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=1.1e-34 Score=325.67 Aligned_cols=198 Identities=25% Similarity=0.394 Sum_probs=172.8
Q ss_pred HHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCCc---ccchhhhHHHHHHhhc-CCCccceeeceeecCCeEEEEE
Q 003385 602 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY---QGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVY 676 (824)
Q Consensus 602 ~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~---~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~lV~ 676 (824)
.+.+.+.||+|+||.||+|+++ +++.||||++++... ...+.+.+|..++.++ +||||+++++++.+.+..++||
T Consensus 53 ~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV~ 132 (396)
T 4dc2_A 53 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVI 132 (396)
T ss_dssp GEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEE
T ss_pred HcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEEE
Confidence 3567789999999999999987 578899999975432 2345578899999887 8999999999999999999999
Q ss_pred EecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccccC
Q 003385 677 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVD 756 (824)
Q Consensus 677 E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~~ 756 (824)
||+++|+|.+++.. ...+++..+..++.||+.||+|||++ +|+||||||+|||++.++++||+|||+++....
T Consensus 133 E~~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFGla~~~~~ 205 (396)
T 4dc2_A 133 EYVNGGDLMFHMQR----QRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR 205 (396)
T ss_dssp ECCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EcCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeecceeeeccc
Confidence 99999999998853 45689999999999999999999998 999999999999999999999999999975332
Q ss_pred CCCceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCC
Q 003385 757 GASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISN 807 (824)
Q Consensus 757 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~ 807 (824)
. .......+||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 206 ~-~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~ 255 (396)
T 4dc2_A 206 P-GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 255 (396)
T ss_dssp T-TCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTT
T ss_pred C-CCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcc
Confidence 2 2234556799999999999999999999999999999999999999964
No 40
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=3e-34 Score=313.97 Aligned_cols=201 Identities=27% Similarity=0.405 Sum_probs=176.1
Q ss_pred HHHHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCCcc------cchhhhHHHHHHhhcCCCccceeeceeecCCeE
Q 003385 600 DATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ------GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRS 672 (824)
Q Consensus 600 ~~~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~~------~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ 672 (824)
...|.+.+.||+|+||.||+|+++ +++.||+|+++..... ..+.+.+|++++++++||||+++++++.+.+..
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 89 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 345778899999999999999986 6889999998754322 245688999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCC----cEEEEec
Q 003385 673 VLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHM----RAKVSDF 748 (824)
Q Consensus 673 ~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~----~vkL~DF 748 (824)
++||||+++++|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++ .+||+||
T Consensus 90 ~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Df 162 (326)
T 2y0a_A 90 ILILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDF 162 (326)
T ss_dssp EEEEECCCSCBHHHHHTT----SSCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCEEECCC
T ss_pred EEEEEcCCCCCHHHHHHh----cCCcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCEEEEEC
Confidence 999999999999999843 45688999999999999999999998 999999999999999877 8999999
Q ss_pred CCcccccCCCCceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCCCc
Q 003385 749 GLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEK 809 (824)
Q Consensus 749 Gla~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~~~ 809 (824)
|+++...... ......||+.|+|||++....++.++|||||||++|||++|+.||.+..
T Consensus 163 g~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~ 221 (326)
T 2y0a_A 163 GLAHKIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT 221 (326)
T ss_dssp TTCEECCTTS--CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS
T ss_pred CCCeECCCCC--ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCC
Confidence 9998654332 2234569999999999998999999999999999999999999997654
No 41
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=1.3e-34 Score=319.66 Aligned_cols=197 Identities=25% Similarity=0.397 Sum_probs=172.6
Q ss_pred HHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCCc---ccchhhhHHHHHHhhc-CCCccceeeceeecCCeEEEEEE
Q 003385 603 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY---QGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVYE 677 (824)
Q Consensus 603 ~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~---~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~lV~E 677 (824)
|.+.+.||+|+||.||+|+++ +++.||+|+++.... ...+.+.+|..+++++ +||||+++++++.+.+..++|||
T Consensus 11 y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~e 90 (345)
T 3a8x_A 11 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIE 90 (345)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC
T ss_pred eEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEEEe
Confidence 456789999999999999986 588999999975432 2234578899999988 89999999999999999999999
Q ss_pred ecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccccCC
Q 003385 678 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 757 (824)
Q Consensus 678 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~~~ 757 (824)
|+++|+|.+++.. ...+++..+..++.||+.||+|||++ +|+||||||+|||++.++++||+|||+++.....
T Consensus 91 ~~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~ 163 (345)
T 3a8x_A 91 YVNGGDLMFHMQR----QRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 163 (345)
T ss_dssp CCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCT
T ss_pred CCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEeccccccccCC
Confidence 9999999998853 35688999999999999999999998 9999999999999999999999999999754322
Q ss_pred CCceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCC
Q 003385 758 ASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISN 807 (824)
Q Consensus 758 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~ 807 (824)
. ......+||+.|+|||++.+..++.++||||+||++|||++|+.||..
T Consensus 164 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 212 (345)
T 3a8x_A 164 G-DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 212 (345)
T ss_dssp T-CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred C-CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCC
Confidence 2 233456799999999999999999999999999999999999999965
No 42
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=8.2e-35 Score=321.83 Aligned_cols=198 Identities=26% Similarity=0.350 Sum_probs=174.6
Q ss_pred HHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCCc---ccchhhhHHHHHHhhcCCCccceeeceeecCCeEEEEEEe
Q 003385 603 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY---QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 678 (824)
Q Consensus 603 ~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~---~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~ 678 (824)
|.+.+.||+|+||.||+|+++ +|+.||||+++.... ...+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 43 y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 122 (350)
T 1rdq_E 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122 (350)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred CEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEcC
Confidence 456789999999999999986 689999999965422 2345678899999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccccCCC
Q 003385 679 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 758 (824)
Q Consensus 679 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~ 758 (824)
+++|+|.+++.. ...+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 123 ~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~- 194 (350)
T 1rdq_E 123 VAGGEMFSHLRR----IGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR- 194 (350)
T ss_dssp CTTCBHHHHHHH----HCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSSC-
T ss_pred CCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcccccceeccCC-
Confidence 999999999853 34588999999999999999999998 9999999999999999999999999999865332
Q ss_pred CceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCCCccc
Q 003385 759 SHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFG 811 (824)
Q Consensus 759 ~~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~~~~~ 811 (824)
....+||+.|+|||++.+..++.++|||||||++|||++|+.||.+....
T Consensus 195 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~ 244 (350)
T 1rdq_E 195 ---TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI 244 (350)
T ss_dssp ---BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred ---cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHH
Confidence 23456999999999999999999999999999999999999999875533
No 43
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=2.6e-34 Score=312.35 Aligned_cols=210 Identities=25% Similarity=0.377 Sum_probs=174.9
Q ss_pred HHHhhccccccCcEEEEEEEEcCCcEEEEEEeccCCcc--cchhhhHHHHHHhhcCCCccceeeceeecCCeEEEEEEec
Q 003385 602 TKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQ--GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 679 (824)
Q Consensus 602 ~~~i~~~LG~G~fg~Vy~a~~~~g~~vAVK~l~~~~~~--~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~ 679 (824)
+|.+.+.||+|+||+||+|++.+++.||+|+++..... ..+.+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 22 ~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~ 101 (311)
T 3niz_A 22 KYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFM 101 (311)
T ss_dssp EEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEECC
T ss_pred hhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEcCC
Confidence 35677899999999999999988999999999754322 2356889999999999999999999999999999999999
Q ss_pred CCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccccCCCC
Q 003385 680 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 759 (824)
Q Consensus 680 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~~ 759 (824)
++ +|.+.+.. ....+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++.......
T Consensus 102 ~~-~l~~~~~~---~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~ 174 (311)
T 3niz_A 102 EK-DLKKVLDE---NKTGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVR 174 (311)
T ss_dssp SE-EHHHHHHT---CTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC
T ss_pred CC-CHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcCceecCCCcc
Confidence 85 78777753 234588999999999999999999998 999999999999999999999999999986543322
Q ss_pred ceeccccCCCCCcchhcccc-CCCCchHHHHHHHHHHHHHHcCCCCCCCCccccchhcHhh
Q 003385 760 HVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQ 819 (824)
Q Consensus 760 ~~~~~~~gt~~y~aPE~l~~-~~~~~~~DIwSlGvil~elltG~~Pf~~~~~~~~~~~iv~ 819 (824)
......||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+....+....+.+
T Consensus 175 -~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~ 234 (311)
T 3niz_A 175 -SYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFS 234 (311)
T ss_dssp ----CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHH
T ss_pred -cccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Confidence 2233468999999999876 5689999999999999999999999988665555444443
No 44
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=2.2e-34 Score=319.89 Aligned_cols=202 Identities=27% Similarity=0.430 Sum_probs=175.9
Q ss_pred HHHHHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCCc--ccchhhhHHHHHHhhcCCCccceeeceeecCCeEEEE
Q 003385 599 EDATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY--QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLV 675 (824)
Q Consensus 599 ~~~~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~--~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV 675 (824)
....|.+.+.||+|+||.||+|.++ +++.||+|++..... ...+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv 106 (362)
T 2bdw_A 27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 106 (362)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 3456778899999999999999876 688999999975432 2345688999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCC---CcEEEEecCCcc
Q 003385 676 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKH---MRAKVSDFGLSK 752 (824)
Q Consensus 676 ~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~---~~vkL~DFGla~ 752 (824)
|||+++|+|.+.+.. ...+++..+..++.||+.||.|||++ +|+||||||+|||++.+ +.+||+|||+++
T Consensus 107 ~e~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~ 179 (362)
T 2bdw_A 107 FDLVTGGELFEDIVA----REFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAI 179 (362)
T ss_dssp ECCCCSCBHHHHHTT----CSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECCCTTCB
T ss_pred EecCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEeecCcce
Confidence 999999999998843 35688999999999999999999998 99999999999999865 459999999997
Q ss_pred cccCCCCceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCCCc
Q 003385 753 FAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEK 809 (824)
Q Consensus 753 ~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~~~ 809 (824)
...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.+..
T Consensus 180 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~ 234 (362)
T 2bdw_A 180 EVNDSE--AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED 234 (362)
T ss_dssp CCTTCC--SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred EecCCc--ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCC
Confidence 654332 2234569999999999999999999999999999999999999997654
No 45
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=9.3e-35 Score=324.02 Aligned_cols=208 Identities=29% Similarity=0.393 Sum_probs=170.2
Q ss_pred HHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCCc---ccchhhhHHHHH-HhhcCCCccceeeceeecCCeEEEEE
Q 003385 602 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY---QGKREFTNEVTL-LSRIHHRNLVQFLGYCQEEGRSVLVY 676 (824)
Q Consensus 602 ~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~---~~~~~~~~Ei~i-l~~l~HpnIv~l~~~~~~~~~~~lV~ 676 (824)
.|.+.+.||+|+||.||+|+++ +++.||||++++... ...+.+.+|..+ ++.++||||+++++++.+.+..++||
T Consensus 39 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv~ 118 (373)
T 2r5t_A 39 DFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVL 118 (373)
T ss_dssp GEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEEE
T ss_pred heEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEEE
Confidence 3567899999999999999987 578899999975432 223445667666 57789999999999999999999999
Q ss_pred EecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccccC
Q 003385 677 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVD 756 (824)
Q Consensus 677 E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~~ 756 (824)
||+++|+|.+++.. ...+++..+..++.||+.||+|||++ +|+||||||+|||++.++++||+|||+++....
T Consensus 119 E~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~ 191 (373)
T 2r5t_A 119 DYINGGELFYHLQR----ERCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIE 191 (373)
T ss_dssp ECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCBCGGGBC
T ss_pred eCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeCcccccccc
Confidence 99999999998843 35678889999999999999999998 999999999999999999999999999986433
Q ss_pred CCCceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCCCccccchhcH
Q 003385 757 GASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNI 817 (824)
Q Consensus 757 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~~~~~~~~~~i 817 (824)
.. ......+||+.|+|||++.+..++.++|||||||++|||++|+.||.+....+..++|
T Consensus 192 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i 251 (373)
T 2r5t_A 192 HN-STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNI 251 (373)
T ss_dssp CC-CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHH
T ss_pred CC-CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHH
Confidence 22 2334567999999999999999999999999999999999999999876544444443
No 46
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.8e-34 Score=315.12 Aligned_cols=199 Identities=20% Similarity=0.350 Sum_probs=174.6
Q ss_pred HHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCCcccchhhhHHHHHHhhcCCCccceeeceeecCCeEEEEEEecC
Q 003385 602 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 680 (824)
Q Consensus 602 ~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~~ 680 (824)
.|.+.+.||+|+||.||+|.++ +++.+|+|+++... .....+.+|+++++.++||||+++++++.+.+..++||||++
T Consensus 6 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~ 84 (321)
T 1tki_A 6 KYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFIS 84 (321)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCC
T ss_pred ceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeCC
Confidence 3567789999999999999886 57889999987443 335568899999999999999999999999999999999999
Q ss_pred CCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcC--CCcEEEEecCCcccccCCC
Q 003385 681 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK--HMRAKVSDFGLSKFAVDGA 758 (824)
Q Consensus 681 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~--~~~vkL~DFGla~~~~~~~ 758 (824)
+|+|.+++.. ....+++..+..++.|++.||.|||++ +|+||||||+|||++. ++.+||+|||+++......
T Consensus 85 g~~L~~~l~~---~~~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~ 158 (321)
T 1tki_A 85 GLDIFERINT---SAFELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD 158 (321)
T ss_dssp CCBHHHHHTS---SSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTC
T ss_pred CCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCC
Confidence 9999998843 234688999999999999999999998 9999999999999997 7899999999998764432
Q ss_pred CceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCCCc
Q 003385 759 SHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEK 809 (824)
Q Consensus 759 ~~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~~~ 809 (824)
......||+.|+|||++.+..++.++||||+||++|||++|..||.+..
T Consensus 159 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~ 207 (321)
T 1tki_A 159 --NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAET 207 (321)
T ss_dssp --EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred --ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCC
Confidence 2334568999999999998889999999999999999999999998755
No 47
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=9.3e-35 Score=308.24 Aligned_cols=201 Identities=31% Similarity=0.554 Sum_probs=176.2
Q ss_pred HHHhhccccccCcEEEEEEEEcCCcEEEEEEeccCCcccchhhhHHHHHHhhcCCCccceeeceeecCCeEEEEEEecCC
Q 003385 602 TKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 681 (824)
Q Consensus 602 ~~~i~~~LG~G~fg~Vy~a~~~~g~~vAVK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~~~ 681 (824)
.|.+.+.||+|+||.||+|++.+++.||+|++..... ..+++.+|++++++++||||+++++++.+.+..++||||+++
T Consensus 11 ~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 89 (269)
T 4hcu_A 11 ELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEH 89 (269)
T ss_dssp GEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTT
T ss_pred hceeeheecCCCccEEEEEEecCCCeEEEEEeccccc-CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCCC
Confidence 4556789999999999999998899999999975443 356789999999999999999999999999999999999999
Q ss_pred CCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccccCCCCce
Q 003385 682 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 761 (824)
Q Consensus 682 gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 761 (824)
++|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.........
T Consensus 90 ~~L~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 163 (269)
T 4hcu_A 90 GCLSDYLRTQ---RGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS 163 (269)
T ss_dssp CBHHHHHHTT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHS
T ss_pred CcHHHHHHhc---CcccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEecccccccccccccccc
Confidence 9999998532 34588999999999999999999998 99999999999999999999999999997654332222
Q ss_pred eccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHc-CCCCCCCCc
Q 003385 762 SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEK 809 (824)
Q Consensus 762 ~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~ellt-G~~Pf~~~~ 809 (824)
.....+|+.|+|||.+....++.++||||+||++|||++ |+.||.+..
T Consensus 164 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~ 212 (269)
T 4hcu_A 164 STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS 212 (269)
T ss_dssp TTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC
T ss_pred ccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCC
Confidence 333457788999999999999999999999999999999 999998754
No 48
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=1.9e-34 Score=321.40 Aligned_cols=208 Identities=27% Similarity=0.486 Sum_probs=176.0
Q ss_pred HHHHhhccccccCcEEEEEEEEc--------CCcEEEEEEeccCCc-ccchhhhHHHHHHhhc-CCCccceeeceeecCC
Q 003385 601 ATKMLEKKIGSGGFGVVYYGKLK--------DGKEIAVKVLTSNSY-QGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEG 670 (824)
Q Consensus 601 ~~~~i~~~LG~G~fg~Vy~a~~~--------~g~~vAVK~l~~~~~-~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~ 670 (824)
..+.+.+.||+|+||.||+|++. ++..||||+++.... ...+.+.+|+++++++ +||||+++++++.+.+
T Consensus 81 ~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~ 160 (370)
T 2psq_A 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 160 (370)
T ss_dssp GGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSS
T ss_pred HHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCC
Confidence 34567889999999999999863 345799999975532 2345788999999999 8999999999999999
Q ss_pred eEEEEEEecCCCCHHHHhhcccC------------ccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEc
Q 003385 671 RSVLVYEFMHNGTLKEHLYGTLT------------HEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLD 738 (824)
Q Consensus 671 ~~~lV~E~~~~gsL~~~L~~~~~------------~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~ 738 (824)
..++||||+++|+|.+++..... ....+++..++.++.||+.||+|||++ +|+||||||+|||++
T Consensus 161 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~ 237 (370)
T 2psq_A 161 PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVT 237 (370)
T ss_dssp SCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEC
T ss_pred CEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchhhEEEC
Confidence 99999999999999999965321 234588999999999999999999998 999999999999999
Q ss_pred CCCcEEEEecCCcccccCCCCc-eeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHc-CCCCCCCCccc
Q 003385 739 KHMRAKVSDFGLSKFAVDGASH-VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKFG 811 (824)
Q Consensus 739 ~~~~vkL~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~ellt-G~~Pf~~~~~~ 811 (824)
.++.+||+|||+++........ ......+|+.|+|||++.+..++.++|||||||++|||++ |+.||.+....
T Consensus 238 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~ 312 (370)
T 2psq_A 238 ENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE 312 (370)
T ss_dssp TTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG
T ss_pred CCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHH
Confidence 9999999999999865433221 2233457889999999999999999999999999999999 99999875533
No 49
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=9.3e-35 Score=307.88 Aligned_cols=202 Identities=32% Similarity=0.536 Sum_probs=177.5
Q ss_pred HHHHhhccccccCcEEEEEEEEcCCcEEEEEEeccCCcccchhhhHHHHHHhhcCCCccceeeceeecCCeEEEEEEecC
Q 003385 601 ATKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 680 (824)
Q Consensus 601 ~~~~i~~~LG~G~fg~Vy~a~~~~g~~vAVK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~~ 680 (824)
..|.+.+.||+|+||.||+|+++++..||+|+++.... ..+++.+|++++++++||||+++++++.+.+..++||||++
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 86 (268)
T 3sxs_A 8 EEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYIS 86 (268)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred hheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEccC
Confidence 34567789999999999999999888999999975443 35678999999999999999999999999999999999999
Q ss_pred CCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccccCCCCc
Q 003385 681 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 760 (824)
Q Consensus 681 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~~~ 760 (824)
+++|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 87 ~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~ 160 (268)
T 3sxs_A 87 NGCLLNYLRSH---GKGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYV 160 (268)
T ss_dssp TCBHHHHHHHH---GGGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEE
T ss_pred CCcHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccceecchhhhh
Confidence 99999998542 34588999999999999999999998 9999999999999999999999999999866554433
Q ss_pred eeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHc-CCCCCCCCc
Q 003385 761 VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEK 809 (824)
Q Consensus 761 ~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~ellt-G~~Pf~~~~ 809 (824)
......+|+.|+|||.+.+..++.++||||+||++|||++ |+.||....
T Consensus 161 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~ 210 (268)
T 3sxs_A 161 SSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYT 210 (268)
T ss_dssp ECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSC
T ss_pred cccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccC
Confidence 3344456788999999999899999999999999999999 999997643
No 50
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=1.4e-34 Score=314.38 Aligned_cols=204 Identities=36% Similarity=0.590 Sum_probs=167.3
Q ss_pred HHHHHhhccccccCcEEEEEEEEcCCcEEEEEEeccCCc--ccchhhhHHHHHHhhcCCCccceeeceeecCCeEEEEEE
Q 003385 600 DATKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSY--QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYE 677 (824)
Q Consensus 600 ~~~~~i~~~LG~G~fg~Vy~a~~~~g~~vAVK~l~~~~~--~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E 677 (824)
...+.+.+.||+|+||.||+|++. ++.||||++..... ...+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 36 ~~~y~i~~~lG~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 114 (309)
T 3p86_A 36 WCDLNIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTE 114 (309)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEEE
T ss_pred hhHceeeeEeecCCCeEEEEEEEC-CCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEEe
Confidence 345667889999999999999874 88999999875432 223568899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCC--eEecCCCCCCEEEcCCCcEEEEecCCccccc
Q 003385 678 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPA--IIHRDLKSSNILLDKHMRAKVSDFGLSKFAV 755 (824)
Q Consensus 678 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~g--IvHrDLkp~NILl~~~~~vkL~DFGla~~~~ 755 (824)
|+++|+|.+++... .....+++..++.++.|++.||+|||++ + |+||||||+|||++.++.+||+|||+++...
T Consensus 115 ~~~~~~L~~~l~~~-~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~ 190 (309)
T 3p86_A 115 YLSRGSLYRLLHKS-GAREQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKA 190 (309)
T ss_dssp CCTTCBHHHHHHST-THHHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEECCCC------
T ss_pred cCCCCcHHHHHhhc-CCCCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEECCCCCCcccc
Confidence 99999999998643 1223488999999999999999999998 8 9999999999999999999999999997543
Q ss_pred CCCCceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCCCc
Q 003385 756 DGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEK 809 (824)
Q Consensus 756 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~~~ 809 (824)
... .......||+.|+|||.+.+..++.++|||||||++|||++|+.||.+..
T Consensus 191 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~ 243 (309)
T 3p86_A 191 STF-LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLN 243 (309)
T ss_dssp ------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSC
T ss_pred ccc-cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 322 22234569999999999999999999999999999999999999998654
No 51
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=4.7e-34 Score=311.02 Aligned_cols=212 Identities=25% Similarity=0.378 Sum_probs=166.4
Q ss_pred HHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCCc-ccchhhhHHHHHHhhcCCCccceeeceeecCCeEEEEEEec
Q 003385 602 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY-QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 679 (824)
Q Consensus 602 ~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~-~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~ 679 (824)
.|.+.+.||+|+||.||+|.++ +++.||+|+++.... ...+.+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 6 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~ 85 (317)
T 2pmi_A 6 QFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFM 85 (317)
T ss_dssp -------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEECC
T ss_pred ceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEEec
Confidence 4667789999999999999875 688999999975432 23467889999999999999999999999999999999999
Q ss_pred CCCCHHHHhhccc--CccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccccCC
Q 003385 680 HNGTLKEHLYGTL--THEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 757 (824)
Q Consensus 680 ~~gsL~~~L~~~~--~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~~~ 757 (824)
+ |+|.+++.... .....+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 86 ~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 161 (317)
T 2pmi_A 86 D-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIP 161 (317)
T ss_dssp C-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSSCEETTSC
T ss_pred C-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCccceecCCC
Confidence 8 59998885432 1234588999999999999999999998 9999999999999999999999999999865432
Q ss_pred CCceeccccCCCCCcchhcccc-CCCCchHHHHHHHHHHHHHHcCCCCCCCCccccchhcHh
Q 003385 758 ASHVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIV 818 (824)
Q Consensus 758 ~~~~~~~~~gt~~y~aPE~l~~-~~~~~~~DIwSlGvil~elltG~~Pf~~~~~~~~~~~iv 818 (824)
.. ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+....+....+.
T Consensus 162 ~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~ 222 (317)
T 2pmi_A 162 VN-TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIF 222 (317)
T ss_dssp CC-CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH
T ss_pred cc-cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Confidence 22 2233468999999999876 468999999999999999999999998866444444443
No 52
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=2.4e-34 Score=327.89 Aligned_cols=202 Identities=24% Similarity=0.381 Sum_probs=174.3
Q ss_pred HHHHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCCc--ccchhhhHHHHHHhhcCCCccceeeceeecCCeEEEEE
Q 003385 600 DATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY--QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVY 676 (824)
Q Consensus 600 ~~~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~--~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~ 676 (824)
...|.+.+.||+|+||.||+|.+. +|+.+|+|++..... ...+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 10 ~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~ 89 (444)
T 3soa_A 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIF 89 (444)
T ss_dssp HHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEE
T ss_pred cCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEE
Confidence 456778899999999999999875 688999999875432 23456889999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEc---CCCcEEEEecCCccc
Q 003385 677 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLD---KHMRAKVSDFGLSKF 753 (824)
Q Consensus 677 E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~---~~~~vkL~DFGla~~ 753 (824)
||+++|+|.+.+.. ...+++..+..++.||+.||.|||++ +|+||||||+|||++ .++.+||+|||+++.
T Consensus 90 E~~~gg~L~~~i~~----~~~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~ 162 (444)
T 3soa_A 90 DLVTGGELFEDIVA----REYYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGLAIE 162 (444)
T ss_dssp CCCBCCBHHHHHHH----CSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECCCSSCBC
T ss_pred EeCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEccCceeEE
Confidence 99999999998853 35688999999999999999999998 999999999999998 457899999999976
Q ss_pred ccCCCCceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCCCc
Q 003385 754 AVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEK 809 (824)
Q Consensus 754 ~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~~~ 809 (824)
...... ......||+.|+|||++.+..++.++||||+||++|+|++|..||.+..
T Consensus 163 ~~~~~~-~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~ 217 (444)
T 3soa_A 163 VEGEQQ-AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDED 217 (444)
T ss_dssp CCTTCC-BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred ecCCCc-eeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCcc
Confidence 544332 2234569999999999999999999999999999999999999997654
No 53
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=8.2e-35 Score=318.33 Aligned_cols=206 Identities=29% Similarity=0.532 Sum_probs=173.9
Q ss_pred HHHHHHHhhccccccCcEEEEEEEEc----CCcEEEEEEeccC-CcccchhhhHHHHHHhhcCCCccceeeceeecCCeE
Q 003385 598 IEDATKMLEKKIGSGGFGVVYYGKLK----DGKEIAVKVLTSN-SYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRS 672 (824)
Q Consensus 598 ~~~~~~~i~~~LG~G~fg~Vy~a~~~----~g~~vAVK~l~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ 672 (824)
+...+|.+.+.||+|+||.||+|++. .+..||||+++.. .....+.+.+|++++++++||||+++++++.+.+..
T Consensus 46 ~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 125 (325)
T 3kul_A 46 IEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLA 125 (325)
T ss_dssp CCGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCC
T ss_pred cChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCcc
Confidence 44456778899999999999999985 3456999999754 233356789999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcc
Q 003385 673 VLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSK 752 (824)
Q Consensus 673 ~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~ 752 (824)
++||||+++|+|.+++... ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 126 ~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 199 (325)
T 3kul_A 126 MIVTEYMENGSLDTFLRTH---DGQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSR 199 (325)
T ss_dssp EEEEECCTTCBHHHHHHTT---TTCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCSSCE
T ss_pred EEEeeCCCCCcHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCCccc
Confidence 9999999999999998532 34688999999999999999999998 99999999999999999999999999998
Q ss_pred cccCCCCc--eeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHc-CCCCCCCCc
Q 003385 753 FAVDGASH--VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEK 809 (824)
Q Consensus 753 ~~~~~~~~--~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~ellt-G~~Pf~~~~ 809 (824)
........ ......+|+.|+|||++.+..++.++|||||||++|||++ |+.||.+..
T Consensus 200 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~ 259 (325)
T 3kul_A 200 VLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMT 259 (325)
T ss_dssp ECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSC
T ss_pred ccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCC
Confidence 65443222 2222346778999999999999999999999999999999 999997644
No 54
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=4e-34 Score=332.55 Aligned_cols=202 Identities=27% Similarity=0.438 Sum_probs=176.7
Q ss_pred HhhccccccCcEEEEEEEEc-CCcEEEEEEeccCCc---ccchhhhHHHHHHhhcCCCccceeeceeecCCeEEEEEEec
Q 003385 604 MLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY---QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 679 (824)
Q Consensus 604 ~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~---~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~ 679 (824)
.+.+.||+|+||.||+|+++ +|+.||+|+++.... ...+.+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 188 ~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmE~~ 267 (543)
T 3c4z_A 188 LDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIM 267 (543)
T ss_dssp EEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred EEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEEEec
Confidence 34578999999999999986 689999999975422 22356788999999999999999999999999999999999
Q ss_pred CCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccccCCCC
Q 003385 680 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 759 (824)
Q Consensus 680 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~~ 759 (824)
++|+|.+++.........+++..+..++.||+.||.|||++ +|+||||||+|||++.++++||+|||+++.......
T Consensus 268 ~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~~ 344 (543)
T 3c4z_A 268 NGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT 344 (543)
T ss_dssp TTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCC
T ss_pred cCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeecceeeeccCCCc
Confidence 99999999876544456789999999999999999999998 999999999999999999999999999986544322
Q ss_pred ceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCCCc
Q 003385 760 HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEK 809 (824)
Q Consensus 760 ~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~~~ 809 (824)
.....+||+.|+|||++.+..++.++|||||||++|||++|+.||.+..
T Consensus 345 -~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~ 393 (543)
T 3c4z_A 345 -KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARG 393 (543)
T ss_dssp -CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTT
T ss_pred -ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCc
Confidence 2334579999999999999999999999999999999999999998753
No 55
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=1.1e-34 Score=309.94 Aligned_cols=203 Identities=31% Similarity=0.553 Sum_probs=174.4
Q ss_pred HHHHHhhccccccCcEEEEEEEEcCCcEEEEEEeccCCcccchhhhHHHHHHhhcCCCccceeeceeecCCeEEEEEEec
Q 003385 600 DATKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 679 (824)
Q Consensus 600 ~~~~~i~~~LG~G~fg~Vy~a~~~~g~~vAVK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~ 679 (824)
...|.+.+.||+|+||.||+|++++++.||||+++.... ..+++.+|++++++++||||+++++++.+.+..++||||+
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 101 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM 101 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCC
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEecc
Confidence 345667899999999999999999888999999975443 3567899999999999999999999999999999999999
Q ss_pred CCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccccCCCC
Q 003385 680 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 759 (824)
Q Consensus 680 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~~ 759 (824)
++++|.+++... ...+++..+..++.|++.||.|||++ +|+||||||+||+++.++.+||+|||+++.......
T Consensus 102 ~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~ 175 (283)
T 3gen_A 102 ANGCLLNYLREM---RHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY 175 (283)
T ss_dssp TTCBHHHHHHCG---GGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHH
T ss_pred CCCcHHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEcccccccccccccc
Confidence 999999998542 35688999999999999999999998 999999999999999999999999999976543322
Q ss_pred ceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHc-CCCCCCCCc
Q 003385 760 HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEK 809 (824)
Q Consensus 760 ~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~ellt-G~~Pf~~~~ 809 (824)
.......+|+.|+|||.+....++.++||||+||++|||++ |+.||....
T Consensus 176 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~ 226 (283)
T 3gen_A 176 TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFT 226 (283)
T ss_dssp HSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSC
T ss_pred ccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccC
Confidence 22333446788999999999999999999999999999998 999998644
No 56
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=3.2e-34 Score=320.68 Aligned_cols=198 Identities=25% Similarity=0.382 Sum_probs=172.8
Q ss_pred HHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCC---cccchhhhHHHHHHhhcCCCccceeeceeecCCeEEEEEE
Q 003385 602 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYE 677 (824)
Q Consensus 602 ~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~---~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E 677 (824)
.|.+.+.||+|+||.||+|+++ +++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 16 ~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~e 95 (384)
T 4fr4_A 16 HFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVD 95 (384)
T ss_dssp GEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred HeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEe
Confidence 3567889999999999999876 57889999986532 2234567899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccccCC
Q 003385 678 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 757 (824)
Q Consensus 678 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~~~ 757 (824)
|+.+|+|.+++.. ...+++..+..++.|++.||.|||++ ||+||||||+|||++.++.+||+|||+++.....
T Consensus 96 ~~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 168 (384)
T 4fr4_A 96 LLLGGDLRYHLQQ----NVHFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE 168 (384)
T ss_dssp CCTTEEHHHHHHT----TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred cCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccceeeeccCC
Confidence 9999999998853 45688999999999999999999998 9999999999999999999999999999865433
Q ss_pred CCceeccccCCCCCcchhcccc---CCCCchHHHHHHHHHHHHHHcCCCCCCCC
Q 003385 758 ASHVSSIVRGTVGYLDPEYYIS---QQLTDKSDVYSFGVILLELISGQEAISNE 808 (824)
Q Consensus 758 ~~~~~~~~~gt~~y~aPE~l~~---~~~~~~~DIwSlGvil~elltG~~Pf~~~ 808 (824)
......+||+.|+|||++.. ..++.++|||||||++|||++|+.||...
T Consensus 169 --~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~ 220 (384)
T 4fr4_A 169 --TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIR 220 (384)
T ss_dssp --CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCC
T ss_pred --CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCC
Confidence 22345679999999999874 45889999999999999999999999753
No 57
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=2.9e-34 Score=313.80 Aligned_cols=200 Identities=25% Similarity=0.417 Sum_probs=171.1
Q ss_pred HHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCCc-ccchhhhHHHHHHhhcCCCccceeeceeecCCeEEEEEEecC
Q 003385 603 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY-QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 680 (824)
Q Consensus 603 ~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~-~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~~ 680 (824)
|.+.+.||+|+||.||+|++. +++.||||++..... ...+.+.+|+.++++++||||+++++++.+.+..++||||++
T Consensus 9 y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~ 88 (323)
T 3tki_A 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCS 88 (323)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred ceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEcCC
Confidence 556789999999999999877 788999999865432 234678899999999999999999999999999999999999
Q ss_pred CCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccccCCCC-
Q 003385 681 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS- 759 (824)
Q Consensus 681 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~~- 759 (824)
+|+|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 89 ~~~L~~~l~----~~~~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 161 (323)
T 3tki_A 89 GGELFDRIE----PDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161 (323)
T ss_dssp TEEGGGGSB----TTTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred CCcHHHHHh----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeeccceeccCCcc
Confidence 999998874 345688999999999999999999998 999999999999999999999999999976543222
Q ss_pred ceeccccCCCCCcchhccccCCC-CchHHHHHHHHHHHHHHcCCCCCCCCc
Q 003385 760 HVSSIVRGTVGYLDPEYYISQQL-TDKSDVYSFGVILLELISGQEAISNEK 809 (824)
Q Consensus 760 ~~~~~~~gt~~y~aPE~l~~~~~-~~~~DIwSlGvil~elltG~~Pf~~~~ 809 (824)
.......||+.|+|||++.+..+ +.++|||||||++|||++|+.||....
T Consensus 162 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~ 212 (323)
T 3tki_A 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS 212 (323)
T ss_dssp CCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSC
T ss_pred cccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCc
Confidence 22334579999999999987775 678999999999999999999997643
No 58
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=3.4e-34 Score=307.42 Aligned_cols=207 Identities=25% Similarity=0.381 Sum_probs=171.7
Q ss_pred HHhhccccccCcEEEEEEEEcCCcEEEEEEeccCCcc--cchhhhHHHHHHhhcCCCccceeeceeecCCeEEEEEEecC
Q 003385 603 KMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQ--GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 680 (824)
Q Consensus 603 ~~i~~~LG~G~fg~Vy~a~~~~g~~vAVK~l~~~~~~--~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~~ 680 (824)
|.+.+.||+|+||.||+|+..+++.||+|+++..... ..+.+.+|++++++++||||+++++++.+.+..++||||++
T Consensus 4 y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 83 (288)
T 1ob3_A 4 YHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLD 83 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCS
T ss_pred chhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEecC
Confidence 4567899999999999999988999999999754322 24568899999999999999999999999999999999998
Q ss_pred CCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccccCCCCc
Q 003385 681 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 760 (824)
Q Consensus 681 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~~~ 760 (824)
+ +|.+++... ...+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++.......
T Consensus 84 ~-~l~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 155 (288)
T 1ob3_A 84 Q-DLKKLLDVC---EGGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVR- 155 (288)
T ss_dssp E-EHHHHHHTS---TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC----
T ss_pred C-CHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECccccccCcccc-
Confidence 5 888887532 35688899999999999999999998 999999999999999999999999999876543222
Q ss_pred eeccccCCCCCcchhcccc-CCCCchHHHHHHHHHHHHHHcCCCCCCCCccccchhcH
Q 003385 761 VSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNI 817 (824)
Q Consensus 761 ~~~~~~gt~~y~aPE~l~~-~~~~~~~DIwSlGvil~elltG~~Pf~~~~~~~~~~~i 817 (824)
......||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+....+...++
T Consensus 156 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~ 213 (288)
T 1ob3_A 156 KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRI 213 (288)
T ss_dssp ------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred ccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 2233458999999999876 45899999999999999999999999876544433333
No 59
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=2.5e-34 Score=319.32 Aligned_cols=201 Identities=20% Similarity=0.220 Sum_probs=172.1
Q ss_pred HHHHhhccccccCcEEEEEEE------EcCCcEEEEEEeccCCcccchhhhHHHHHHhhcC---CCccceeeceeecCCe
Q 003385 601 ATKMLEKKIGSGGFGVVYYGK------LKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIH---HRNLVQFLGYCQEEGR 671 (824)
Q Consensus 601 ~~~~i~~~LG~G~fg~Vy~a~------~~~g~~vAVK~l~~~~~~~~~~~~~Ei~il~~l~---HpnIv~l~~~~~~~~~ 671 (824)
..|.+.+.||+|+||.||+|. ...++.||||+++... ..++.+|++++++++ |+||+++++++...+.
T Consensus 65 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~ 141 (365)
T 3e7e_A 65 KLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN---PWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNG 141 (365)
T ss_dssp SEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC---HHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSC
T ss_pred EEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC---hhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCC
Confidence 345677899999999999994 4468899999997543 456778888888886 9999999999999999
Q ss_pred EEEEEEecCCCCHHHHhhcccC-ccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcC-----------
Q 003385 672 SVLVYEFMHNGTLKEHLYGTLT-HEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK----------- 739 (824)
Q Consensus 672 ~~lV~E~~~~gsL~~~L~~~~~-~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~----------- 739 (824)
.++||||+++|+|.+++..... ....+++..++.++.|++.||+|||++ +|+||||||+|||++.
T Consensus 142 ~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~~~~~~~~~~ 218 (365)
T 3e7e_A 142 SVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLEQDDEDDL 218 (365)
T ss_dssp EEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGGTCC------
T ss_pred cEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccccCccccccc
Confidence 9999999999999999854322 346689999999999999999999998 9999999999999998
Q ss_pred CCcEEEEecCCcccccC-CCCceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCC
Q 003385 740 HMRAKVSDFGLSKFAVD-GASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISN 807 (824)
Q Consensus 740 ~~~vkL~DFGla~~~~~-~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~ 807 (824)
++.+||+|||+++.... .........+||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 219 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~ 287 (365)
T 3e7e_A 219 SAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVK 287 (365)
T ss_dssp CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEE
T ss_pred cCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCcccc
Confidence 89999999999975432 223344556799999999999999999999999999999999999999864
No 60
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.5e-34 Score=316.01 Aligned_cols=199 Identities=25% Similarity=0.439 Sum_probs=172.3
Q ss_pred HHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCC---cccchhhhHHHHHHhhcCCCccceeeceeecCCeEEEEEE
Q 003385 602 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYE 677 (824)
Q Consensus 602 ~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~---~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E 677 (824)
.|.+.+.||+|+||.||+|++. +++.||||++.... ....+.+.+|+++++.++||||+++++++.+.+..++|||
T Consensus 10 ~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~E 89 (336)
T 3h4j_B 10 PYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIE 89 (336)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred CEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEE
Confidence 3567789999999999999974 78999999986432 2224578899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccccCC
Q 003385 678 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 757 (824)
Q Consensus 678 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~~~ 757 (824)
|+ +|+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||+++++.+||+|||+++.....
T Consensus 90 ~~-~g~l~~~l~~----~~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~ 161 (336)
T 3h4j_B 90 YA-GGELFDYIVE----KKRMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDG 161 (336)
T ss_dssp CC-CEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTS
T ss_pred CC-CCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEeccceeccCC
Confidence 99 6889888743 35688999999999999999999998 9999999999999999999999999999765433
Q ss_pred CCceeccccCCCCCcchhccccCCC-CchHHHHHHHHHHHHHHcCCCCCCCCcc
Q 003385 758 ASHVSSIVRGTVGYLDPEYYISQQL-TDKSDVYSFGVILLELISGQEAISNEKF 810 (824)
Q Consensus 758 ~~~~~~~~~gt~~y~aPE~l~~~~~-~~~~DIwSlGvil~elltG~~Pf~~~~~ 810 (824)
. .....+||+.|+|||++.+..+ +.++||||+||++|||++|+.||.+...
T Consensus 162 ~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~ 213 (336)
T 3h4j_B 162 N--FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFI 213 (336)
T ss_dssp B--TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSS
T ss_pred c--ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccH
Confidence 2 2234569999999999988776 6899999999999999999999987543
No 61
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=5.8e-34 Score=317.77 Aligned_cols=197 Identities=26% Similarity=0.423 Sum_probs=168.6
Q ss_pred hccccccCcEEEEEEEEc-CCcEEEEEEeccCCcccchhhhHHHHHHhhcCCCccceeeceeecCCeEEEEEEecCCCCH
Q 003385 606 EKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNGTL 684 (824)
Q Consensus 606 ~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~~~gsL 684 (824)
.+.||+|+||.||+|+.. +|+.||+|+++.......+.+.+|++++++++||||+++++++.+.+..++||||+++++|
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L 173 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL 173 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEE
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcH
Confidence 467999999999999875 6899999999876655667899999999999999999999999999999999999999999
Q ss_pred HHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEE--cCCCcEEEEecCCcccccCCCCcee
Q 003385 685 KEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILL--DKHMRAKVSDFGLSKFAVDGASHVS 762 (824)
Q Consensus 685 ~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl--~~~~~vkL~DFGla~~~~~~~~~~~ 762 (824)
.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||+++....... .
T Consensus 174 ~~~l~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~--~ 245 (373)
T 2x4f_A 174 FDRIID---ESYNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK--L 245 (373)
T ss_dssp HHHHHH---TGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCB--C
T ss_pred HHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccc--c
Confidence 988853 234588999999999999999999998 99999999999999 5668999999999986644322 2
Q ss_pred ccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCCCcc
Q 003385 763 SIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKF 810 (824)
Q Consensus 763 ~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~~~~ 810 (824)
....||+.|+|||++....++.++|||||||++|||++|+.||.+...
T Consensus 246 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~ 293 (373)
T 2x4f_A 246 KVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDND 293 (373)
T ss_dssp CCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSH
T ss_pred ccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH
Confidence 334699999999999988999999999999999999999999987553
No 62
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=5.1e-34 Score=307.40 Aligned_cols=199 Identities=29% Similarity=0.442 Sum_probs=166.1
Q ss_pred HHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCCcc--------------------------cchhhhHHHHHHhhc
Q 003385 602 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ--------------------------GKREFTNEVTLLSRI 654 (824)
Q Consensus 602 ~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~~--------------------------~~~~~~~Ei~il~~l 654 (824)
.|.+.+.||+|+||.||+|++. +++.||||++...... ..+.+.+|+++++++
T Consensus 14 ~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 93 (298)
T 2zv2_A 14 QYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKL 93 (298)
T ss_dssp TEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHTC
T ss_pred ceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhC
Confidence 4567789999999999999875 6889999998654311 135688999999999
Q ss_pred CCCccceeeceeec--CCeEEEEEEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCC
Q 003385 655 HHRNLVQFLGYCQE--EGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKS 732 (824)
Q Consensus 655 ~HpnIv~l~~~~~~--~~~~~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp 732 (824)
+||||+++++++.+ .+..++||||+++++|.+++ ....+++..+..++.|++.||+|||++ +|+||||||
T Consensus 94 ~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~-----~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp 165 (298)
T 2zv2_A 94 DHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVP-----TLKPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIKP 165 (298)
T ss_dssp CCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSS-----CSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCG
T ss_pred CCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHh-----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCH
Confidence 99999999999976 56889999999999987754 245689999999999999999999998 999999999
Q ss_pred CCEEEcCCCcEEEEecCCcccccCCCCceeccccCCCCCcchhccccCC---CCchHHHHHHHHHHHHHHcCCCCCCCCc
Q 003385 733 SNILLDKHMRAKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQ---LTDKSDVYSFGVILLELISGQEAISNEK 809 (824)
Q Consensus 733 ~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~---~~~~~DIwSlGvil~elltG~~Pf~~~~ 809 (824)
+|||++.++.+||+|||+++....... ......||+.|+|||.+.... ++.++|||||||++|||++|+.||.+..
T Consensus 166 ~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~ 244 (298)
T 2zv2_A 166 SNLLVGEDGHIKIADFGVSNEFKGSDA-LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDER 244 (298)
T ss_dssp GGEEECTTSCEEECCCTTCEECSSSSC-EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred HHEEECCCCCEEEecCCCccccccccc-cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCcc
Confidence 999999999999999999986544322 233456999999999998665 3678999999999999999999997643
No 63
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=6.7e-34 Score=318.64 Aligned_cols=200 Identities=23% Similarity=0.411 Sum_probs=176.0
Q ss_pred HHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCCcccchhhhHHHHHHhhcCCCccceeeceeecCCeEEEEEEecC
Q 003385 602 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 680 (824)
Q Consensus 602 ~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~~ 680 (824)
.|.+.+.||+|+||.||+|..+ +++.||+|++..........+.+|++++++++||||+++++++.+.+..++||||++
T Consensus 52 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~~~ 131 (387)
T 1kob_A 52 YYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLS 131 (387)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCC
T ss_pred ceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEcCC
Confidence 4667889999999999999876 688999999976655556678999999999999999999999999999999999999
Q ss_pred CCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcC--CCcEEEEecCCcccccCCC
Q 003385 681 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK--HMRAKVSDFGLSKFAVDGA 758 (824)
Q Consensus 681 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~--~~~vkL~DFGla~~~~~~~ 758 (824)
+|+|.+++.. ....+++..+..++.||+.||+|||++ +|+||||||+|||++. ++.+||+|||+++......
T Consensus 132 gg~L~~~l~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~ 205 (387)
T 1kob_A 132 GGELFDRIAA---EDYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE 205 (387)
T ss_dssp CCBHHHHTTC---TTCCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTS
T ss_pred CCcHHHHHHh---hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEecccceecCCCc
Confidence 9999998853 234688999999999999999999998 9999999999999974 4789999999998664432
Q ss_pred CceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCCCc
Q 003385 759 SHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEK 809 (824)
Q Consensus 759 ~~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~~~ 809 (824)
......||+.|+|||++.+..++.++|||||||++|||++|+.||.+..
T Consensus 206 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~ 254 (387)
T 1kob_A 206 --IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGED 254 (387)
T ss_dssp --CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSS
T ss_pred --ceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCC
Confidence 2233469999999999999999999999999999999999999998754
No 64
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=1.7e-34 Score=329.75 Aligned_cols=200 Identities=27% Similarity=0.382 Sum_probs=165.4
Q ss_pred HHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccC---CcccchhhhHHHHHHhhcCCCccceeeceeecCCeEEEEEE
Q 003385 602 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSN---SYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYE 677 (824)
Q Consensus 602 ~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~---~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E 677 (824)
.|.+.+.||+|+||.||+|++. +++.||||+++.. .......+.+|++++++++||||+++++++.+.+..++|||
T Consensus 149 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e 228 (446)
T 4ejn_A 149 EFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVME 228 (446)
T ss_dssp GEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEEEC
T ss_pred HcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEEEe
Confidence 3567789999999999999876 6889999999753 22334567789999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHh-CCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccccC
Q 003385 678 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHT-GCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVD 756 (824)
Q Consensus 678 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~-~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~~ 756 (824)
|+++|+|.+++.. ...+++..+..++.|++.||+|||+ . +|+||||||+|||++.++.+||+|||+++....
T Consensus 229 ~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 301 (446)
T 4ejn_A 229 YANGGELFFHLSR----ERVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIK 301 (446)
T ss_dssp CCSSCBHHHHHHH----HSCCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC
T ss_pred eCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEccCCCceeccC
Confidence 9999999998843 4568899999999999999999998 7 999999999999999999999999999975433
Q ss_pred CCCceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCCCc
Q 003385 757 GASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEK 809 (824)
Q Consensus 757 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~~~ 809 (824)
.. ......+||+.|+|||++.+..++.++|||||||++|||++|+.||.+..
T Consensus 302 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~ 353 (446)
T 4ejn_A 302 DG-ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD 353 (446)
T ss_dssp ------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred CC-cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCC
Confidence 22 22344679999999999999999999999999999999999999997654
No 65
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=7.8e-34 Score=310.82 Aligned_cols=199 Identities=21% Similarity=0.321 Sum_probs=173.2
Q ss_pred HHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCCcccchhhhHHHHHHhhc-CCCccceeeceeecCCeEEEEEEec
Q 003385 602 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVYEFM 679 (824)
Q Consensus 602 ~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~lV~E~~ 679 (824)
.|.+.+.||+|+||.||+|+.. +++.||||++.... ..+.+.+|+++++++ +||||+++++++...+..++||||+
T Consensus 10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~ 87 (330)
T 2izr_A 10 NFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS--RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL 87 (330)
T ss_dssp TEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC--SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC
T ss_pred CeEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc--chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC
Confidence 3556789999999999999874 78899999987543 245788999999999 9999999999999999999999999
Q ss_pred CCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCc-----EEEEecCCcccc
Q 003385 680 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMR-----AKVSDFGLSKFA 754 (824)
Q Consensus 680 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~-----vkL~DFGla~~~ 754 (824)
+++|.+++... ...+++..++.++.|++.||+|||++ +|+||||||+|||++.++. +||+|||+++..
T Consensus 88 -~~~L~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~ 160 (330)
T 2izr_A 88 -GPSLEDLFDLC---DRTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEY 160 (330)
T ss_dssp -CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEES
T ss_pred -CCCHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEcccceee
Confidence 99999998542 35689999999999999999999998 9999999999999998887 999999999865
Q ss_pred cCCCCc------eeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCCCc
Q 003385 755 VDGASH------VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEK 809 (824)
Q Consensus 755 ~~~~~~------~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~~~ 809 (824)
...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.+..
T Consensus 161 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~ 221 (330)
T 2izr_A 161 IDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLK 221 (330)
T ss_dssp BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred ecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccc
Confidence 443221 1234579999999999999999999999999999999999999998754
No 66
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.1e-33 Score=308.09 Aligned_cols=203 Identities=25% Similarity=0.392 Sum_probs=172.2
Q ss_pred HHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCCc-ccchhhhHHHHHHhhcCCCccceeeceeecCC--eEEEEEE
Q 003385 602 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY-QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEG--RSVLVYE 677 (824)
Q Consensus 602 ~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~-~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~--~~~lV~E 677 (824)
+|.+.+.||+|+||.||+|++. +++.||||+++.... ...+.+.+|++++++++||||+++++++.... ..++|||
T Consensus 10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e 89 (319)
T 4euu_A 10 LWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIME 89 (319)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEE
T ss_pred CEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEEe
Confidence 3567789999999999999987 489999999975432 23466789999999999999999999987654 7899999
Q ss_pred ecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEE----cCCCcEEEEecCCccc
Q 003385 678 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILL----DKHMRAKVSDFGLSKF 753 (824)
Q Consensus 678 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl----~~~~~vkL~DFGla~~ 753 (824)
|+++++|.+++.... ....+++..+..++.|++.||+|||++ +|+||||||+|||+ +.++.+||+|||+++.
T Consensus 90 ~~~~~~L~~~l~~~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~ 165 (319)
T 4euu_A 90 FCPCGSLYTVLEEPS-NAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE 165 (319)
T ss_dssp CCTTCBHHHHHHSGG-GTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCCTTCEE
T ss_pred CCCCCCHHHHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccCCCcee
Confidence 999999999986432 223489999999999999999999998 99999999999999 7778899999999986
Q ss_pred ccCCCCceeccccCCCCCcchhccc--------cCCCCchHHHHHHHHHHHHHHcCCCCCCCCcc
Q 003385 754 AVDGASHVSSIVRGTVGYLDPEYYI--------SQQLTDKSDVYSFGVILLELISGQEAISNEKF 810 (824)
Q Consensus 754 ~~~~~~~~~~~~~gt~~y~aPE~l~--------~~~~~~~~DIwSlGvil~elltG~~Pf~~~~~ 810 (824)
...... .....||+.|+|||++. ...++.++|||||||++|||++|+.||.....
T Consensus 166 ~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~ 228 (319)
T 4euu_A 166 LEDDEQ--FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEG 228 (319)
T ss_dssp CCTTCC--BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTC
T ss_pred cCCCCc--eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCc
Confidence 644332 23356999999999986 47788999999999999999999999976443
No 67
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=5.7e-34 Score=316.42 Aligned_cols=201 Identities=28% Similarity=0.379 Sum_probs=164.3
Q ss_pred HHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCCcccchhhhHHHHHHhhcCCCccceeeceeecCCeEEEEEEecC
Q 003385 602 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 680 (824)
Q Consensus 602 ~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~~ 680 (824)
+|.+.+.||+|+||.||+|+++ +++.||||++.... ...+.+.+|+.++++++||||+++++++.+.+..++||||++
T Consensus 21 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~ 99 (361)
T 3uc3_A 21 RYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA-AIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYAS 99 (361)
T ss_dssp TEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESST-TSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred cEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCc-cccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeCC
Confidence 4667899999999999999987 78899999997543 234678899999999999999999999999999999999999
Q ss_pred CCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCc--EEEEecCCcccccCCC
Q 003385 681 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMR--AKVSDFGLSKFAVDGA 758 (824)
Q Consensus 681 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~--vkL~DFGla~~~~~~~ 758 (824)
+|+|.+++.. ...+++..+..++.|++.||+|||++ +|+||||||+|||++.++. +||+|||+++......
T Consensus 100 ~~~L~~~l~~----~~~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~ 172 (361)
T 3uc3_A 100 GGELYERICN----AGRFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS 172 (361)
T ss_dssp SCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCCCC-------
T ss_pred CCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecCccccccccC
Confidence 9999998843 34688999999999999999999998 9999999999999987765 9999999987433221
Q ss_pred CceeccccCCCCCcchhccccCCCCch-HHHHHHHHHHHHHHcCCCCCCCCcccc
Q 003385 759 SHVSSIVRGTVGYLDPEYYISQQLTDK-SDVYSFGVILLELISGQEAISNEKFGA 812 (824)
Q Consensus 759 ~~~~~~~~gt~~y~aPE~l~~~~~~~~-~DIwSlGvil~elltG~~Pf~~~~~~~ 812 (824)
......||+.|+|||++.+..++.+ +||||+||++|||++|+.||.+....+
T Consensus 173 --~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~ 225 (361)
T 3uc3_A 173 --QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPR 225 (361)
T ss_dssp ----------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CC
T ss_pred --CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHH
Confidence 2233469999999999988888766 899999999999999999998754333
No 68
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=1e-33 Score=304.13 Aligned_cols=199 Identities=23% Similarity=0.354 Sum_probs=167.9
Q ss_pred HHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCCcc--cchhhhHHHHHHhhcCCCccceeeceeecCCeEEEEEEec
Q 003385 603 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ--GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 679 (824)
Q Consensus 603 ~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~~--~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~ 679 (824)
|.+.+.||+|+||+||+|+++ +++.||||+++..... ..+.+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 4 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 83 (292)
T 3o0g_A 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFC 83 (292)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred ceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEecC
Confidence 456789999999999999986 5889999999754322 2356789999999999999999999999999999999999
Q ss_pred CCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccccCCCC
Q 003385 680 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 759 (824)
Q Consensus 680 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~~ 759 (824)
++ ++.+.+.. ....+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++.......
T Consensus 84 ~~-~l~~~~~~---~~~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 156 (292)
T 3o0g_A 84 DQ-DLKKYFDS---CNGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVR 156 (292)
T ss_dssp SE-EHHHHHHH---TTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCS
T ss_pred CC-CHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecCCccc
Confidence 86 55555432 245688999999999999999999998 999999999999999999999999999986543322
Q ss_pred ceeccccCCCCCcchhccccCC-CCchHHHHHHHHHHHHHHcCCCCC-CCCc
Q 003385 760 HVSSIVRGTVGYLDPEYYISQQ-LTDKSDVYSFGVILLELISGQEAI-SNEK 809 (824)
Q Consensus 760 ~~~~~~~gt~~y~aPE~l~~~~-~~~~~DIwSlGvil~elltG~~Pf-~~~~ 809 (824)
......||+.|+|||++.+.. ++.++||||+||++|||++|..|| .+..
T Consensus 157 -~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~ 207 (292)
T 3o0g_A 157 -CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGND 207 (292)
T ss_dssp -CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSS
T ss_pred -cccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCC
Confidence 223456899999999998765 799999999999999999988885 4443
No 69
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=1.2e-33 Score=309.17 Aligned_cols=192 Identities=24% Similarity=0.397 Sum_probs=150.6
Q ss_pred ccccccCcEEEEEEEEc-CCcEEEEEEeccCCcccchhhhHHHHHHhhcC-CCccceeeceeecCCeEEEEEEecCCCCH
Q 003385 607 KKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIH-HRNLVQFLGYCQEEGRSVLVYEFMHNGTL 684 (824)
Q Consensus 607 ~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~~~lV~E~~~~gsL 684 (824)
+.||+|+||.||+|.++ +++.||||++... ....+.+|+++++++. ||||+++++++.+....++||||+++|+|
T Consensus 17 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 93 (325)
T 3kn6_A 17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGEL 93 (325)
T ss_dssp CCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcH
Confidence 68999999999999986 6889999998643 3456788999999997 99999999999999999999999999999
Q ss_pred HHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCC---cEEEEecCCcccccCCCCce
Q 003385 685 KEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHM---RAKVSDFGLSKFAVDGASHV 761 (824)
Q Consensus 685 ~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~---~vkL~DFGla~~~~~~~~~~ 761 (824)
.+++.. ...+++..+..++.|++.||+|||++ +|+||||||+|||++.++ .+||+|||+++....... .
T Consensus 94 ~~~l~~----~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~-~ 165 (325)
T 3kn6_A 94 FERIKK----KKHFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQ-P 165 (325)
T ss_dssp HHHHHH----CSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-----
T ss_pred HHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCC-c
Confidence 999853 35689999999999999999999998 999999999999998765 899999999986543322 2
Q ss_pred eccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCCCc
Q 003385 762 SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEK 809 (824)
Q Consensus 762 ~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~~~ 809 (824)
....+||+.|+|||++.+..++.++||||+||++|||++|+.||.+..
T Consensus 166 ~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~ 213 (325)
T 3kn6_A 166 LKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHD 213 (325)
T ss_dssp ------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC---
T ss_pred ccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCc
Confidence 334568999999999999999999999999999999999999997643
No 70
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=8.5e-34 Score=330.85 Aligned_cols=200 Identities=31% Similarity=0.464 Sum_probs=175.1
Q ss_pred HHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCC---cccchhhhHHHHHHhhcCCCccceeeceeecCCeEEEEEEe
Q 003385 603 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 678 (824)
Q Consensus 603 ~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~---~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~ 678 (824)
+.+.+.||+|+||.||+|+++ +|+.||||++.... ......+.+|+++|++++||||+++++++.+.+..++||||
T Consensus 186 f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmEy 265 (576)
T 2acx_A 186 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 265 (576)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred eEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEEEEc
Confidence 445689999999999999986 68999999996532 22345578899999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccccCCC
Q 003385 679 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 758 (824)
Q Consensus 679 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~ 758 (824)
+++|+|.+++... ....+++..+..++.||+.||+|||++ +|+||||||+|||++.++++||+|||+++......
T Consensus 266 ~~gg~L~~~l~~~--~~~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~ 340 (576)
T 2acx_A 266 MNGGDLKFHIYHM--GQAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ 340 (576)
T ss_dssp CCSCBHHHHHHSS--SSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECCTTC
T ss_pred CCCCcHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEecccceecccCc
Confidence 9999999988643 234588999999999999999999998 99999999999999999999999999998664432
Q ss_pred CceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCCCc
Q 003385 759 SHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEK 809 (824)
Q Consensus 759 ~~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~~~ 809 (824)
.....+||+.|+|||++.+..++.++|||||||++|||++|+.||.+..
T Consensus 341 --~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~ 389 (576)
T 2acx_A 341 --TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRK 389 (576)
T ss_dssp --CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSS
T ss_pred --cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccc
Confidence 2234579999999999999899999999999999999999999998754
No 71
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=1.9e-33 Score=299.37 Aligned_cols=200 Identities=24% Similarity=0.352 Sum_probs=175.1
Q ss_pred HHHHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCCcccchhhhHHHHHHhhcCCCccceeeceeecCCeEEEEEEe
Q 003385 600 DATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 678 (824)
Q Consensus 600 ~~~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~ 678 (824)
...|.+.+.||+|+||.||+|.++ +++.||+|++........+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMEL 87 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEec
Confidence 346778899999999999999886 4678999999766555567899999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEE---cCCCcEEEEecCCccccc
Q 003385 679 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILL---DKHMRAKVSDFGLSKFAV 755 (824)
Q Consensus 679 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl---~~~~~vkL~DFGla~~~~ 755 (824)
+++++|.+++.. ...+++..+..++.|++.||+|||++ +|+||||||+||++ +.++.+||+|||++....
T Consensus 88 ~~~~~L~~~~~~----~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~ 160 (277)
T 3f3z_A 88 CTGGELFERVVH----KRVFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK 160 (277)
T ss_dssp CCSCBHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred cCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEecccceecc
Confidence 999999998843 35588999999999999999999998 99999999999999 778999999999997654
Q ss_pred CCCCceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCCCc
Q 003385 756 DGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEK 809 (824)
Q Consensus 756 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~~~ 809 (824)
... ......||+.|+|||.+.+ .++.++||||+||++|||++|+.||.+..
T Consensus 161 ~~~--~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~ 211 (277)
T 3f3z_A 161 PGK--MMRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPT 211 (277)
T ss_dssp TTS--CBCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred Ccc--chhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCC
Confidence 432 2234568999999998765 48999999999999999999999998644
No 72
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=6.7e-34 Score=312.69 Aligned_cols=207 Identities=26% Similarity=0.363 Sum_probs=169.7
Q ss_pred HHHHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccC-----CcccchhhhHHHHHHhhcCCCccceeeceeecCCeEE
Q 003385 600 DATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSN-----SYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSV 673 (824)
Q Consensus 600 ~~~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~-----~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 673 (824)
..+|.+.+.||+|+||.||+|.++ +++.||+|++... .....+.+.+|++++++++||||+++++++.+.+..+
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 104 (345)
T 3hko_A 25 QKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYIC 104 (345)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEE
Confidence 356778899999999999999875 6788999998643 2233467889999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHhhcccCc------------------------------------cccCCHHHHHHHHHHHHHHHHHH
Q 003385 674 LVYEFMHNGTLKEHLYGTLTH------------------------------------EQRINWIKRLEIAEDAAKGIEYL 717 (824)
Q Consensus 674 lV~E~~~~gsL~~~L~~~~~~------------------------------------~~~l~~~~~~~i~~qia~gL~yL 717 (824)
+||||+++|+|.+++...... ...+++..+..++.|++.||+||
T Consensus 105 lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~L 184 (345)
T 3hko_A 105 LVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYL 184 (345)
T ss_dssp EEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHH
Confidence 999999999999988421111 12235677888999999999999
Q ss_pred HhCCCCCeEecCCCCCCEEEcCCC--cEEEEecCCcccccCCCC---ceeccccCCCCCcchhcccc--CCCCchHHHHH
Q 003385 718 HTGCVPAIIHRDLKSSNILLDKHM--RAKVSDFGLSKFAVDGAS---HVSSIVRGTVGYLDPEYYIS--QQLTDKSDVYS 790 (824)
Q Consensus 718 H~~~~~gIvHrDLkp~NILl~~~~--~vkL~DFGla~~~~~~~~---~~~~~~~gt~~y~aPE~l~~--~~~~~~~DIwS 790 (824)
|+. +|+||||||+|||++.++ .+||+|||+++....... .......||+.|+|||.+.. ..++.++||||
T Consensus 185 H~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Diws 261 (345)
T 3hko_A 185 HNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWS 261 (345)
T ss_dssp HHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHH
T ss_pred HHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHH
Confidence 998 999999999999998776 899999999986543221 12344569999999999875 67889999999
Q ss_pred HHHHHHHHHcCCCCCCCCc
Q 003385 791 FGVILLELISGQEAISNEK 809 (824)
Q Consensus 791 lGvil~elltG~~Pf~~~~ 809 (824)
|||++|||++|+.||.+..
T Consensus 262 lG~il~el~~g~~pf~~~~ 280 (345)
T 3hko_A 262 AGVLLHLLLMGAVPFPGVN 280 (345)
T ss_dssp HHHHHHHHHHSSCSSCCSS
T ss_pred HHHHHHHHHHCCCCCCCCC
Confidence 9999999999999997644
No 73
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=1.4e-33 Score=307.43 Aligned_cols=202 Identities=26% Similarity=0.376 Sum_probs=168.8
Q ss_pred HHHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCCc-ccchhhhHHHHHHhhcCCCccceeeceeecCC--------
Q 003385 601 ATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY-QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEG-------- 670 (824)
Q Consensus 601 ~~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~-~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~-------- 670 (824)
..|.+.+.||+|+||.||+|+++ +++.||||+++.... ...+.+.+|++++++++||||+++++++.+..
T Consensus 6 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 85 (332)
T 3qd2_B 6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEM 85 (332)
T ss_dssp HHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHH
T ss_pred hcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhh
Confidence 35667889999999999999987 789999999975432 33567899999999999999999999885543
Q ss_pred -------------------------------------------------eEEEEEEecCCCCHHHHhhcccCccccCCHH
Q 003385 671 -------------------------------------------------RSVLVYEFMHNGTLKEHLYGTLTHEQRINWI 701 (824)
Q Consensus 671 -------------------------------------------------~~~lV~E~~~~gsL~~~L~~~~~~~~~l~~~ 701 (824)
..++||||+++++|.+++.... ......+.
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~ 164 (332)
T 3qd2_B 86 DEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRC-SLEDREHG 164 (332)
T ss_dssp HC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCC-SGGGSCHH
T ss_pred hhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhccc-CccchhhH
Confidence 3799999999999999986543 23445677
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccccCCCC-----------ceeccccCCCC
Q 003385 702 KRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS-----------HVSSIVRGTVG 770 (824)
Q Consensus 702 ~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~~-----------~~~~~~~gt~~ 770 (824)
.++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++....... .......||+.
T Consensus 165 ~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 241 (332)
T 3qd2_B 165 VCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKL 241 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGG
T ss_pred HHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcC
Confidence 7889999999999999998 999999999999999999999999999986654321 12233469999
Q ss_pred CcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCC
Q 003385 771 YLDPEYYISQQLTDKSDVYSFGVILLELISGQEAIS 806 (824)
Q Consensus 771 y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~ 806 (824)
|+|||.+.+..++.++|||||||++|||++|..|+.
T Consensus 242 y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~ 277 (332)
T 3qd2_B 242 YMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQM 277 (332)
T ss_dssp GSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHH
T ss_pred ccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChh
Confidence 999999999999999999999999999999988764
No 74
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=1.9e-34 Score=313.05 Aligned_cols=201 Identities=27% Similarity=0.465 Sum_probs=165.3
Q ss_pred HHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCCccc---chhhhHHHHHHhhcCCCccceeeceeecCC----eEE
Q 003385 602 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQG---KREFTNEVTLLSRIHHRNLVQFLGYCQEEG----RSV 673 (824)
Q Consensus 602 ~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~~~---~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~----~~~ 673 (824)
+|.+.+.||+|+||.||+|++. +++.||||+++...... ...+.+|++++++++||||+++++++.... ..+
T Consensus 13 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~ 92 (311)
T 3ork_A 13 RYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPY 92 (311)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred cEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcccE
Confidence 4667899999999999999974 68899999997643222 346889999999999999999999986543 348
Q ss_pred EEEEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCccc
Q 003385 674 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKF 753 (824)
Q Consensus 674 lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~ 753 (824)
+||||+++++|.+++.. ...+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++.
T Consensus 93 lv~e~~~g~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~ 165 (311)
T 3ork_A 93 IVMEYVDGVTLRDIVHT----EGPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARA 165 (311)
T ss_dssp EEEECCCEEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCSCC--
T ss_pred EEEecCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeeccCccc
Confidence 99999999999999853 34688999999999999999999998 999999999999999999999999999976
Q ss_pred ccCCCCc--eeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCCCc
Q 003385 754 AVDGASH--VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEK 809 (824)
Q Consensus 754 ~~~~~~~--~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~~~ 809 (824)
....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.+..
T Consensus 166 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~ 223 (311)
T 3ork_A 166 IADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDS 223 (311)
T ss_dssp ----------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred ccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC
Confidence 5433221 2233568999999999999999999999999999999999999998654
No 75
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.7e-34 Score=315.04 Aligned_cols=201 Identities=28% Similarity=0.388 Sum_probs=171.7
Q ss_pred HHHhhccccccCcEEEEEEEE----cCCcEEEEEEeccCC----cccchhhhHHHHHHhhc-CCCccceeeceeecCCeE
Q 003385 602 TKMLEKKIGSGGFGVVYYGKL----KDGKEIAVKVLTSNS----YQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRS 672 (824)
Q Consensus 602 ~~~i~~~LG~G~fg~Vy~a~~----~~g~~vAVK~l~~~~----~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~ 672 (824)
.|.+.+.||+|+||.||+|+. .+++.||||+++... ....+.+.+|+++++++ +||||+++++++...+..
T Consensus 55 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~ 134 (355)
T 1vzo_A 55 NFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKL 134 (355)
T ss_dssp GEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEE
T ss_pred ceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCceE
Confidence 456789999999999999987 368999999987542 22345678899999999 699999999999999999
Q ss_pred EEEEEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcc
Q 003385 673 VLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSK 752 (824)
Q Consensus 673 ~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~ 752 (824)
++||||+++++|.+++.. ...+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||+++
T Consensus 135 ~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DfG~a~ 207 (355)
T 1vzo_A 135 HLILDYINGGELFTHLSQ----RERFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSK 207 (355)
T ss_dssp EEEECCCCSCBHHHHHHH----HSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSEEE
T ss_pred EEEeecCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEEEeeCCCCe
Confidence 999999999999999853 34688999999999999999999998 99999999999999999999999999998
Q ss_pred cccCCCCceeccccCCCCCcchhcccc--CCCCchHHHHHHHHHHHHHHcCCCCCCCCc
Q 003385 753 FAVDGASHVSSIVRGTVGYLDPEYYIS--QQLTDKSDVYSFGVILLELISGQEAISNEK 809 (824)
Q Consensus 753 ~~~~~~~~~~~~~~gt~~y~aPE~l~~--~~~~~~~DIwSlGvil~elltG~~Pf~~~~ 809 (824)
.............+||+.|+|||++.+ ..++.++|||||||++|||++|+.||....
T Consensus 208 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~ 266 (355)
T 1vzo_A 208 EFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDG 266 (355)
T ss_dssp ECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTT
T ss_pred ecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCC
Confidence 654433333344579999999999985 357899999999999999999999997543
No 76
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=8.4e-34 Score=317.87 Aligned_cols=209 Identities=27% Similarity=0.452 Sum_probs=164.9
Q ss_pred HHHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccC--CcccchhhhHHHHHHhhcC-CCccceeeceeecC--CeEEE
Q 003385 601 ATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSN--SYQGKREFTNEVTLLSRIH-HRNLVQFLGYCQEE--GRSVL 674 (824)
Q Consensus 601 ~~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~--~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~--~~~~l 674 (824)
.+|.+.+.||+|+||.||+|.++ +++.||||++... .....+.+.+|+.+++++. ||||+++++++... ...++
T Consensus 9 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~l 88 (388)
T 3oz6_A 9 RKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYL 88 (388)
T ss_dssp TTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEE
T ss_pred CceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEE
Confidence 45677899999999999999875 6899999998643 2233456788999999997 99999999998754 37899
Q ss_pred EEEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccc
Q 003385 675 VYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFA 754 (824)
Q Consensus 675 V~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~ 754 (824)
||||++ ++|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 89 v~e~~~-~~L~~~~~~-----~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~ 159 (388)
T 3oz6_A 89 VFDYME-TDLHAVIRA-----NILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLSRSF 159 (388)
T ss_dssp EEECCS-EEHHHHHHH-----TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEES
T ss_pred EecccC-cCHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCCcccccc
Confidence 999998 588888743 4678889999999999999999998 9999999999999999999999999999764
Q ss_pred cCC--------------------CCceeccccCCCCCcchhcccc-CCCCchHHHHHHHHHHHHHHcCCCCCCCCccccc
Q 003385 755 VDG--------------------ASHVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGAN 813 (824)
Q Consensus 755 ~~~--------------------~~~~~~~~~gt~~y~aPE~l~~-~~~~~~~DIwSlGvil~elltG~~Pf~~~~~~~~ 813 (824)
... ........+||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+....+.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~ 239 (388)
T 3oz6_A 160 VNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQ 239 (388)
T ss_dssp SSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred cccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 321 1112234579999999999886 6789999999999999999999999988765544
Q ss_pred hhcHh
Q 003385 814 CRNIV 818 (824)
Q Consensus 814 ~~~iv 818 (824)
...|+
T Consensus 240 ~~~i~ 244 (388)
T 3oz6_A 240 LERII 244 (388)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44444
No 77
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=4.2e-34 Score=327.28 Aligned_cols=202 Identities=27% Similarity=0.481 Sum_probs=174.0
Q ss_pred HHHHhhccccccCcEEEEEEEEcCCcEEEEEEeccCCcccchhhhHHHHHHhhcCCCccceeeceeecCCeEEEEEEecC
Q 003385 601 ATKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 680 (824)
Q Consensus 601 ~~~~i~~~LG~G~fg~Vy~a~~~~g~~vAVK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~~ 680 (824)
..+.+.+.||+|+||.||+|++++++.||||+++... ...+.+.+|+++|++++||||+++++++. .+..++||||++
T Consensus 188 ~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~~ 265 (454)
T 1qcf_A 188 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFMA 265 (454)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCCT
T ss_pred HHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeecC
Confidence 3456788999999999999999989999999997644 34678999999999999999999999987 556899999999
Q ss_pred CCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccccCCCCc
Q 003385 681 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 760 (824)
Q Consensus 681 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~~~ 760 (824)
+|+|.+++... ....+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++........
T Consensus 266 ~g~L~~~l~~~--~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~ 340 (454)
T 1qcf_A 266 KGSLLDFLKSD--EGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYT 340 (454)
T ss_dssp TCBHHHHHHSH--HHHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHH
T ss_pred CCcHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCcee
Confidence 99999999542 233578889999999999999999998 9999999999999999999999999999865432212
Q ss_pred eeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHc-CCCCCCCCc
Q 003385 761 VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEK 809 (824)
Q Consensus 761 ~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~ellt-G~~Pf~~~~ 809 (824)
......+|+.|+|||++....++.++|||||||++|||++ |+.||.+..
T Consensus 341 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~ 390 (454)
T 1qcf_A 341 AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMS 390 (454)
T ss_dssp TTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred ccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCC
Confidence 2223346789999999999999999999999999999999 999998654
No 78
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=4.6e-34 Score=318.99 Aligned_cols=202 Identities=32% Similarity=0.525 Sum_probs=173.2
Q ss_pred HHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCC-cccchhhhHHHHHHhhcCCCccceeeceeecCCeEEEEEEec
Q 003385 602 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 679 (824)
Q Consensus 602 ~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~ 679 (824)
.+.+.+.||+|+||.||+|+++ +++.||||+++... ....+.+.+|+++|++++||||+++++++.+.+..++||||+
T Consensus 115 ~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 194 (377)
T 3cbl_A 115 DLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELV 194 (377)
T ss_dssp GEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred HeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEEcC
Confidence 4557789999999999999987 78999999987543 223467899999999999999999999999999999999999
Q ss_pred CCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccccCCCC
Q 003385 680 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 759 (824)
Q Consensus 680 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~~ 759 (824)
++|+|.+++.. ....+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++.......
T Consensus 195 ~~g~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~ 268 (377)
T 3cbl_A 195 QGGDFLTFLRT---EGARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVY 268 (377)
T ss_dssp TTCBHHHHHHH---HGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEE
T ss_pred CCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCCceecCCCce
Confidence 99999999853 234588999999999999999999998 999999999999999999999999999975433211
Q ss_pred cee-ccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHc-CCCCCCCCc
Q 003385 760 HVS-SIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEK 809 (824)
Q Consensus 760 ~~~-~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~ellt-G~~Pf~~~~ 809 (824)
... ....+++.|+|||.+....++.++|||||||++|||++ |+.||.+..
T Consensus 269 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~ 320 (377)
T 3cbl_A 269 AASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLS 320 (377)
T ss_dssp ECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSC
T ss_pred eecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC
Confidence 111 11235678999999999999999999999999999998 999997644
No 79
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=1.4e-33 Score=311.01 Aligned_cols=196 Identities=26% Similarity=0.407 Sum_probs=169.7
Q ss_pred HHHHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCCcccchhhhHHHHHHhhc-CCCccceeeceeecCCeEEEEEE
Q 003385 600 DATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVYE 677 (824)
Q Consensus 600 ~~~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~lV~E 677 (824)
...|.+.+.||+|+||.||+|.++ +++.||||+++... ....+|++++.++ +||||+++++++.+.+..++|||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~----~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E 96 (342)
T 2qr7_A 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSK----RDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTE 96 (342)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTT----CCCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEEC
T ss_pred cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEccc----CChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEe
Confidence 345777899999999999999886 68899999996542 3456789999888 79999999999999999999999
Q ss_pred ecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCC----CcEEEEecCCccc
Q 003385 678 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKH----MRAKVSDFGLSKF 753 (824)
Q Consensus 678 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~----~~vkL~DFGla~~ 753 (824)
|+++|+|.+++.. ...+++..+..++.||+.||+|||++ ||+||||||+|||+.++ +.+||+|||+++.
T Consensus 97 ~~~gg~L~~~i~~----~~~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~ 169 (342)
T 2qr7_A 97 LMKGGELLDKILR----QKFFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQ 169 (342)
T ss_dssp CCCSCBHHHHHHT----CTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECCCTTCEE
T ss_pred CCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEECCCccc
Confidence 9999999998853 35688999999999999999999998 99999999999998543 3599999999986
Q ss_pred ccCCCCceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCC
Q 003385 754 AVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISN 807 (824)
Q Consensus 754 ~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~ 807 (824)
...... .....+||+.|+|||++.+..++.++|||||||++|||++|+.||.+
T Consensus 170 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~ 222 (342)
T 2qr7_A 170 LRAENG-LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFAN 222 (342)
T ss_dssp CBCTTC-CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCS
T ss_pred CcCCCC-ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCC
Confidence 544322 23445789999999999888899999999999999999999999975
No 80
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=1.9e-33 Score=315.05 Aligned_cols=205 Identities=20% Similarity=0.294 Sum_probs=175.2
Q ss_pred HHHhhcccccc--CcEEEEEEEEc-CCcEEEEEEeccCC--cccchhhhHHHHHHhhcCCCccceeeceeecCCeEEEEE
Q 003385 602 TKMLEKKIGSG--GFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVY 676 (824)
Q Consensus 602 ~~~i~~~LG~G--~fg~Vy~a~~~-~g~~vAVK~l~~~~--~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~ 676 (824)
.|.+.+.||+| +||.||+|+++ +++.||||+++... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 26 ~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 105 (389)
T 3gni_B 26 CYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVT 105 (389)
T ss_dssp GEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEEEE
Confidence 46678999999 99999999987 68999999997543 223456788999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccccC
Q 003385 677 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVD 756 (824)
Q Consensus 677 E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~~ 756 (824)
||+++|+|.+++... ....+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||.+.....
T Consensus 106 e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~ 180 (389)
T 3gni_B 106 SFMAYGSAKDLICTH--FMDGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMIS 180 (389)
T ss_dssp ECCTTCBHHHHHHHT--CTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCGGGCEECEE
T ss_pred EccCCCCHHHHHhhh--cccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccccceeecc
Confidence 999999999998543 234588999999999999999999998 999999999999999999999999998764322
Q ss_pred CCC------ceeccccCCCCCcchhcccc--CCCCchHHHHHHHHHHHHHHcCCCCCCCCccc
Q 003385 757 GAS------HVSSIVRGTVGYLDPEYYIS--QQLTDKSDVYSFGVILLELISGQEAISNEKFG 811 (824)
Q Consensus 757 ~~~------~~~~~~~gt~~y~aPE~l~~--~~~~~~~DIwSlGvil~elltG~~Pf~~~~~~ 811 (824)
... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+....
T Consensus 181 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~ 243 (389)
T 3gni_B 181 HGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPAT 243 (389)
T ss_dssp TTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCST
T ss_pred ccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHH
Confidence 111 11223468999999999987 67899999999999999999999999875543
No 81
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=2.7e-33 Score=305.29 Aligned_cols=201 Identities=27% Similarity=0.430 Sum_probs=176.0
Q ss_pred HHHHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCCcc------cchhhhHHHHHHhhcCCCccceeeceeecCCeE
Q 003385 600 DATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ------GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRS 672 (824)
Q Consensus 600 ~~~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~~------~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ 672 (824)
...|.+.+.||+|+||.||+|+++ +++.||+|+++..... ..+.+.+|++++++++||||+++++++.+.+..
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 446778899999999999999986 6889999999754322 245688999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCC----cEEEEec
Q 003385 673 VLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHM----RAKVSDF 748 (824)
Q Consensus 673 ~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~----~vkL~DF 748 (824)
++||||+++++|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++ .+||+||
T Consensus 91 ~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~kl~Df 163 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQ----KESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDF 163 (321)
T ss_dssp EEEECCCCSCBHHHHHHT----CSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCC
T ss_pred EEEEEcCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCEEEccC
Confidence 999999999999999853 34678899999999999999999998 999999999999999887 7999999
Q ss_pred CCcccccCCCCceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCCCc
Q 003385 749 GLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEK 809 (824)
Q Consensus 749 Gla~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~~~ 809 (824)
|+++....... .....||+.|+|||.+.+..++.++|||||||++|||++|+.||.+..
T Consensus 164 g~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 222 (321)
T 2a2a_A 164 GLAHEIEDGVE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT 222 (321)
T ss_dssp TTCEECCTTCC--CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS
T ss_pred ccceecCcccc--ccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCC
Confidence 99986544322 233468999999999999999999999999999999999999997654
No 82
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=1e-33 Score=324.78 Aligned_cols=206 Identities=24% Similarity=0.348 Sum_probs=168.3
Q ss_pred HHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccC--CcccchhhhHHHHHHhhcCCCccceeeceeecC------CeE
Q 003385 602 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSN--SYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEE------GRS 672 (824)
Q Consensus 602 ~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~--~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~------~~~ 672 (824)
+|.+.+.||+|+||.||+|.+. +++.||||++... .....+.+.+|+++++.++||||+++++++... ...
T Consensus 63 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~ 142 (464)
T 3ttj_A 63 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDV 142 (464)
T ss_dssp TEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEE
T ss_pred CeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCeE
Confidence 4667789999999999999876 6889999999754 223356788999999999999999999998654 467
Q ss_pred EEEEEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcc
Q 003385 673 VLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSK 752 (824)
Q Consensus 673 ~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~ 752 (824)
++||||++++ |.+.+. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 143 ~lv~E~~~~~-l~~~~~------~~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG~a~ 212 (464)
T 3ttj_A 143 YLVMELMDAN-LCQVIQ------MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR 212 (464)
T ss_dssp EEEEECCSEE-HHHHHT------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCCC-
T ss_pred EEEEeCCCCC-HHHHHh------hcCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEEeee
Confidence 9999999864 666553 2378889999999999999999998 99999999999999999999999999998
Q ss_pred cccCCCCceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCCCccccchhcHhh
Q 003385 753 FAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQ 819 (824)
Q Consensus 753 ~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~~~~~~~~~~iv~ 819 (824)
..... ......+||+.|+|||++.+..++.++||||+||++|||++|+.||.+....+....|++
T Consensus 213 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~ 277 (464)
T 3ttj_A 213 TAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIE 277 (464)
T ss_dssp ----C--CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred ecCCC--cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 65432 223445699999999999999999999999999999999999999998765444444443
No 83
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=1.2e-33 Score=324.51 Aligned_cols=203 Identities=28% Similarity=0.489 Sum_probs=176.4
Q ss_pred HHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCCc---ccchhhhHHHHHHhhcCCCccceeeceeecCCeEEEEEE
Q 003385 602 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY---QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYE 677 (824)
Q Consensus 602 ~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~---~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E 677 (824)
.|.+.+.||+|+||.||+|++. +|+.||||+++.... ...+.+.+|+++++.++||||+++++++.+.+..++|||
T Consensus 17 ~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~E 96 (476)
T 2y94_A 17 HYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVME 96 (476)
T ss_dssp TEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred CEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence 3567789999999999999986 789999999975422 224568899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccccCC
Q 003385 678 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 757 (824)
Q Consensus 678 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~~~ 757 (824)
|+++|+|.+++. ....+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 97 ~~~gg~L~~~l~----~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~ 169 (476)
T 2y94_A 97 YVSGGELFDYIC----KNGRLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG 169 (476)
T ss_dssp CCSSEEHHHHTT----SSSSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCSSCEECCTT
T ss_pred CCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEeccchhhcccc
Confidence 999999999884 345689999999999999999999998 9999999999999999999999999999866443
Q ss_pred CCceeccccCCCCCcchhccccCCC-CchHHHHHHHHHHHHHHcCCCCCCCCccccc
Q 003385 758 ASHVSSIVRGTVGYLDPEYYISQQL-TDKSDVYSFGVILLELISGQEAISNEKFGAN 813 (824)
Q Consensus 758 ~~~~~~~~~gt~~y~aPE~l~~~~~-~~~~DIwSlGvil~elltG~~Pf~~~~~~~~ 813 (824)
. .....+||+.|+|||++.+..+ +.++||||+||++|||++|+.||.+....+.
T Consensus 170 ~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~ 224 (476)
T 2y94_A 170 E--FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTL 224 (476)
T ss_dssp C--CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHH
T ss_pred c--cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHH
Confidence 2 2334579999999999988766 6799999999999999999999987654433
No 84
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8e-34 Score=312.13 Aligned_cols=208 Identities=28% Similarity=0.459 Sum_probs=174.3
Q ss_pred HHHHHHhhccccccCcEEEEEEEEc------CCcEEEEEEeccCC-cccchhhhHHHHHHhhc-CCCccceeeceeecCC
Q 003385 599 EDATKMLEKKIGSGGFGVVYYGKLK------DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEG 670 (824)
Q Consensus 599 ~~~~~~i~~~LG~G~fg~Vy~a~~~------~g~~vAVK~l~~~~-~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~ 670 (824)
....+.+.+.||+|+||.||+|++. +++.||||+++... ....+.+.+|+++++++ +||||+++++++...+
T Consensus 43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 122 (344)
T 1rjb_A 43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSG 122 (344)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCC
Confidence 3455677899999999999999862 45679999997542 33456789999999999 8999999999999999
Q ss_pred eEEEEEEecCCCCHHHHhhcccCc-------------------cccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCC
Q 003385 671 RSVLVYEFMHNGTLKEHLYGTLTH-------------------EQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLK 731 (824)
Q Consensus 671 ~~~lV~E~~~~gsL~~~L~~~~~~-------------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLk 731 (824)
..++||||+++|+|.+++...... ...+++..++.++.|++.||.|||++ +|+|||||
T Consensus 123 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dik 199 (344)
T 1rjb_A 123 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDLA 199 (344)
T ss_dssp SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEETTCS
T ss_pred ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCC
Confidence 999999999999999999653211 13478999999999999999999998 99999999
Q ss_pred CCCEEEcCCCcEEEEecCCcccccCCCC-ceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHc-CCCCCCCCc
Q 003385 732 SSNILLDKHMRAKVSDFGLSKFAVDGAS-HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEK 809 (824)
Q Consensus 732 p~NILl~~~~~vkL~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~ellt-G~~Pf~~~~ 809 (824)
|+|||++.++.+||+|||+++....... .......||+.|+|||.+.+..++.++|||||||++|||++ |..||.+..
T Consensus 200 p~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 279 (344)
T 1rjb_A 200 ARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIP 279 (344)
T ss_dssp GGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred hhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCC
Confidence 9999999999999999999986544332 22334457889999999999999999999999999999998 999998754
No 85
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=1.7e-33 Score=304.70 Aligned_cols=216 Identities=24% Similarity=0.375 Sum_probs=174.8
Q ss_pred HHHHHHHHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCCc-----ccchhhhHHHHHHhhcC---CCccceeecee
Q 003385 596 SDIEDATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY-----QGKREFTNEVTLLSRIH---HRNLVQFLGYC 666 (824)
Q Consensus 596 ~~~~~~~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~-----~~~~~~~~Ei~il~~l~---HpnIv~l~~~~ 666 (824)
+++...+|.+.+.||+|+||+||+|++. +++.||||+++.... .....+.+|++++++++ ||||+++++++
T Consensus 4 g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~ 83 (308)
T 3g33_A 4 GSMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVC 83 (308)
T ss_dssp ------CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEE
T ss_pred CcccccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeee
Confidence 3445567788899999999999999874 688999999864321 11345678888887775 99999999999
Q ss_pred ecCC-----eEEEEEEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCC
Q 003385 667 QEEG-----RSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHM 741 (824)
Q Consensus 667 ~~~~-----~~~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~ 741 (824)
.... ..++||||+. ++|.+++... ....+++..+..++.|++.||+|||++ +|+||||||+|||++.++
T Consensus 84 ~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~ 157 (308)
T 3g33_A 84 ATSRTDREIKVTLVFEHVD-QDLRTYLDKA--PPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGG 157 (308)
T ss_dssp EECCSSSEEEEEEEEECCC-CBHHHHHHTC--CTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTS
T ss_pred eccCCCCceeEEEEehhhh-cCHHHHHhhc--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCC
Confidence 7654 5789999997 5999988543 233489999999999999999999998 999999999999999999
Q ss_pred cEEEEecCCcccccCCCCceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCCCccccchhcHhh
Q 003385 742 RAKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQ 819 (824)
Q Consensus 742 ~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~~~~~~~~~~iv~ 819 (824)
.+||+|||+++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.+....+...++.+
T Consensus 158 ~~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~ 233 (308)
T 3g33_A 158 TVKLADFGLARIYSYQM--ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFD 233 (308)
T ss_dssp CEEECSCSCTTTSTTCC--CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHH
T ss_pred CEEEeeCccccccCCCc--ccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 99999999997654322 23445689999999999999999999999999999999999999988765544444443
No 86
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=1.7e-33 Score=311.03 Aligned_cols=197 Identities=28% Similarity=0.439 Sum_probs=158.3
Q ss_pred HHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCCcccchhhhHHHHHHhhcCCCccceeeceeecCCeEEEEEEecC
Q 003385 602 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 680 (824)
Q Consensus 602 ~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~~ 680 (824)
.|.+.+.||+|+||.||+|+++ +++.||||+++... ..+.+.+|++++++++||||+++++++.+.+..++||||++
T Consensus 54 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 131 (349)
T 2w4o_A 54 FFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVT 131 (349)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred cEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeCC
Confidence 4567789999999999999987 57889999997543 34668899999999999999999999999999999999999
Q ss_pred CCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcC---CCcEEEEecCCcccccCC
Q 003385 681 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK---HMRAKVSDFGLSKFAVDG 757 (824)
Q Consensus 681 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~---~~~vkL~DFGla~~~~~~ 757 (824)
+++|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||++. ++.+||+|||+++.....
T Consensus 132 ~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 204 (349)
T 2w4o_A 132 GGELFDRIVE----KGYYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQ 204 (349)
T ss_dssp SCBHHHHHTT----CSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCCC--------
T ss_pred CCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccCccccccCcc
Confidence 9999998843 35588999999999999999999998 9999999999999975 789999999998765432
Q ss_pred CCceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCCCc
Q 003385 758 ASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEK 809 (824)
Q Consensus 758 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~~~ 809 (824)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||.+..
T Consensus 205 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~ 254 (349)
T 2w4o_A 205 --VLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDER 254 (349)
T ss_dssp ----------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTT
T ss_pred --cccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCc
Confidence 12234568999999999999999999999999999999999999997644
No 87
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=3.3e-33 Score=307.02 Aligned_cols=199 Identities=26% Similarity=0.402 Sum_probs=173.2
Q ss_pred HHHHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCCcc--------cchhhhHHHHHHhhcCCCccceeeceeecCC
Q 003385 600 DATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ--------GKREFTNEVTLLSRIHHRNLVQFLGYCQEEG 670 (824)
Q Consensus 600 ~~~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~~--------~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~ 670 (824)
...|.+.+.||+|+||.||+|+++ +++.||||+++..... ..+.+.+|++++++++||||+++++++.+.+
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~ 102 (335)
T 3dls_A 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQG 102 (335)
T ss_dssp HHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred ccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCC
Confidence 456778899999999999999875 6889999999754321 2346889999999999999999999999999
Q ss_pred eEEEEEEecCCC-CHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecC
Q 003385 671 RSVLVYEFMHNG-TLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFG 749 (824)
Q Consensus 671 ~~~lV~E~~~~g-sL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFG 749 (824)
..++||||+.+| +|.+++.. ...+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||
T Consensus 103 ~~~lv~e~~~~g~~l~~~~~~----~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg 175 (335)
T 3dls_A 103 FFQLVMEKHGSGLDLFAFIDR----HPRLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDFG 175 (335)
T ss_dssp EEEEEEECCTTSCBHHHHHHT----CCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCT
T ss_pred EEEEEEEeCCCCccHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEEEeecc
Confidence 999999999777 99988843 34688999999999999999999998 99999999999999999999999999
Q ss_pred CcccccCCCCceeccccCCCCCcchhccccCCC-CchHHHHHHHHHHHHHHcCCCCCCC
Q 003385 750 LSKFAVDGASHVSSIVRGTVGYLDPEYYISQQL-TDKSDVYSFGVILLELISGQEAISN 807 (824)
Q Consensus 750 la~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~-~~~~DIwSlGvil~elltG~~Pf~~ 807 (824)
+++....... .....||+.|+|||++.+..+ +.++|||||||++|||++|+.||..
T Consensus 176 ~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 232 (335)
T 3dls_A 176 SAAYLERGKL--FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCE 232 (335)
T ss_dssp TCEECCTTCC--BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSS
T ss_pred cceECCCCCc--eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhh
Confidence 9986644322 234569999999999988877 7889999999999999999999975
No 88
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=1.7e-33 Score=336.87 Aligned_cols=207 Identities=27% Similarity=0.352 Sum_probs=177.5
Q ss_pred HHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCC---cccchhhhHHHHHHhhc-CCCccceeeceeecCCeEEEEE
Q 003385 602 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVY 676 (824)
Q Consensus 602 ~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~---~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~lV~ 676 (824)
.|.+.+.||+|+||.||+|+++ +++.||||+++... ....+.+..|..++..+ +||+|+++++++.+.+..++||
T Consensus 342 ~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~lV~ 421 (674)
T 3pfq_A 342 DFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 421 (674)
T ss_dssp TEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEEEE
T ss_pred ceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEEEE
Confidence 3566789999999999999976 57889999997542 22345677899999887 7999999999999999999999
Q ss_pred EecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccccC
Q 003385 677 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVD 756 (824)
Q Consensus 677 E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~~ 756 (824)
||+++|+|.+++.. ...+++..+..++.||+.||+|||++ +|+||||||+|||++.++++||+|||+++....
T Consensus 422 E~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~ 494 (674)
T 3pfq_A 422 EYVNGGDLMYHIQQ----VGRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW 494 (674)
T ss_dssp ECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCCTTCEECCC
T ss_pred eCcCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeecceeecccc
Confidence 99999999999853 35688999999999999999999998 999999999999999999999999999985433
Q ss_pred CCCceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCCCccccchhc
Q 003385 757 GASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRN 816 (824)
Q Consensus 757 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~~~~~~~~~~ 816 (824)
.. ......+||+.|+|||++.+..++.++|||||||++|||++|+.||.+....+..+.
T Consensus 495 ~~-~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~ 553 (674)
T 3pfq_A 495 DG-VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQS 553 (674)
T ss_dssp TT-CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred CC-cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHH
Confidence 22 234456799999999999999999999999999999999999999987654433333
No 89
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=8.2e-34 Score=311.54 Aligned_cols=206 Identities=28% Similarity=0.487 Sum_probs=174.1
Q ss_pred HHHHhhccccccCcEEEEEEEEcC------CcEEEEEEeccCCc-ccchhhhHHHHHHhhcCCCccceeeceeecCCeEE
Q 003385 601 ATKMLEKKIGSGGFGVVYYGKLKD------GKEIAVKVLTSNSY-QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSV 673 (824)
Q Consensus 601 ~~~~i~~~LG~G~fg~Vy~a~~~~------g~~vAVK~l~~~~~-~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 673 (824)
..|.+.+.||+|+||.||+|++++ ++.||||+++.... ...+.+.+|++++++++||||+++++++.+.+..+
T Consensus 47 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 126 (343)
T 1luf_A 47 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMC 126 (343)
T ss_dssp GGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCE
T ss_pred HHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCceE
Confidence 345677899999999999998753 47899999975432 23467899999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHhhcccCc--------------------cccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCC
Q 003385 674 LVYEFMHNGTLKEHLYGTLTH--------------------EQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSS 733 (824)
Q Consensus 674 lV~E~~~~gsL~~~L~~~~~~--------------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~ 733 (824)
+||||+++|+|.+++...... ...+++..++.++.|++.||.|||++ +|+||||||+
T Consensus 127 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~ 203 (343)
T 1luf_A 127 LLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLATR 203 (343)
T ss_dssp EEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGG
T ss_pred EEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcc
Confidence 999999999999998653211 25689999999999999999999998 9999999999
Q ss_pred CEEEcCCCcEEEEecCCcccccCCCC-ceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHc-CCCCCCCCc
Q 003385 734 NILLDKHMRAKVSDFGLSKFAVDGAS-HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEK 809 (824)
Q Consensus 734 NILl~~~~~vkL~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~ellt-G~~Pf~~~~ 809 (824)
|||++.++.+||+|||+++....... .......+|+.|+|||.+....++.++|||||||++|||++ |+.||.+..
T Consensus 204 NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 281 (343)
T 1luf_A 204 NCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMA 281 (343)
T ss_dssp GEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC
T ss_pred eEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCC
Confidence 99999999999999999975533221 22233457899999999999999999999999999999999 999997654
No 90
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=2.3e-33 Score=300.59 Aligned_cols=203 Identities=24% Similarity=0.426 Sum_probs=171.4
Q ss_pred HHHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCC-cccchhhhHHHHHHhhcCCCccceeeceeecCCeEEEEEEe
Q 003385 601 ATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 678 (824)
Q Consensus 601 ~~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~ 678 (824)
..|.+.+.||+|+||.||+|+.+ +++.+|+|++.... ....+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 101 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMET 101 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEe
Confidence 45778899999999999999876 68899999987543 23356788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEc---CCCcEEEEecCCccccc
Q 003385 679 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLD---KHMRAKVSDFGLSKFAV 755 (824)
Q Consensus 679 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~---~~~~vkL~DFGla~~~~ 755 (824)
+++|+|.+.+.........+++..+..++.|++.||+|||++ +|+||||||+||+++ .++.+||+|||+++...
T Consensus 102 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~ 178 (285)
T 3is5_A 102 CEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK 178 (285)
T ss_dssp CSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC--
T ss_pred CCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEeeecceecC
Confidence 999999998865444456789999999999999999999998 999999999999994 45789999999997654
Q ss_pred CCCCceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCCCc
Q 003385 756 DGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEK 809 (824)
Q Consensus 756 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~~~ 809 (824)
... ......||+.|+|||.+. ..++.++|||||||++|||++|+.||.+..
T Consensus 179 ~~~--~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~ 229 (285)
T 3is5_A 179 SDE--HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTS 229 (285)
T ss_dssp ----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred Ccc--cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCC
Confidence 322 223456899999999875 578999999999999999999999998654
No 91
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=9.8e-34 Score=299.40 Aligned_cols=201 Identities=31% Similarity=0.542 Sum_probs=175.1
Q ss_pred HHHhhccccccCcEEEEEEEEcCCcEEEEEEeccCCcccchhhhHHHHHHhhcCCCccceeeceeecCCeEEEEEEecCC
Q 003385 602 TKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 681 (824)
Q Consensus 602 ~~~i~~~LG~G~fg~Vy~a~~~~g~~vAVK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~~~ 681 (824)
.+.+.+.||+|+||.||+|++.+++.||+|+++.... ..+.+.+|++++++++||||+++++++.+.+..++||||+++
T Consensus 9 ~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 87 (267)
T 3t9t_A 9 ELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEH 87 (267)
T ss_dssp GEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCTT
T ss_pred heeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCCC
Confidence 4556789999999999999998899999999976543 346789999999999999999999999999999999999999
Q ss_pred CCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccccCCCCce
Q 003385 682 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV 761 (824)
Q Consensus 682 gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 761 (824)
++|.+++... ...+++..+..++.|++.||.|||++ +|+||||||+||+++.++.+||+|||+++.........
T Consensus 88 ~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~ 161 (267)
T 3t9t_A 88 GCLSDYLRTQ---RGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS 161 (267)
T ss_dssp CBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHS
T ss_pred CcHHHHHhhC---cccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEcccccccccccccccc
Confidence 9999998542 34578999999999999999999998 99999999999999999999999999987654322222
Q ss_pred eccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHc-CCCCCCCCc
Q 003385 762 SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEK 809 (824)
Q Consensus 762 ~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~ellt-G~~Pf~~~~ 809 (824)
.....++..|+|||.+....++.++||||+|+++|||++ |+.||.+..
T Consensus 162 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~ 210 (267)
T 3t9t_A 162 STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS 210 (267)
T ss_dssp TTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC
T ss_pred cccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCC
Confidence 233457789999999999999999999999999999999 899998644
No 92
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.9e-33 Score=314.50 Aligned_cols=209 Identities=28% Similarity=0.489 Sum_probs=177.4
Q ss_pred HHHHHHHhhccccccCcEEEEEEEEc--------CCcEEEEEEeccCCc-ccchhhhHHHHHHhhc-CCCccceeeceee
Q 003385 598 IEDATKMLEKKIGSGGFGVVYYGKLK--------DGKEIAVKVLTSNSY-QGKREFTNEVTLLSRI-HHRNLVQFLGYCQ 667 (824)
Q Consensus 598 ~~~~~~~i~~~LG~G~fg~Vy~a~~~--------~g~~vAVK~l~~~~~-~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~ 667 (824)
+...++.+.+.||+|+||.||+|++. .++.||||+++.... ...+.+.+|+++++++ +||||+++++++.
T Consensus 66 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~ 145 (382)
T 3tt0_A 66 LPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACT 145 (382)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred cchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeec
Confidence 33446678899999999999999863 235799999975532 2346788999999999 8999999999999
Q ss_pred cCCeEEEEEEecCCCCHHHHhhcccC------------ccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCE
Q 003385 668 EEGRSVLVYEFMHNGTLKEHLYGTLT------------HEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNI 735 (824)
Q Consensus 668 ~~~~~~lV~E~~~~gsL~~~L~~~~~------------~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NI 735 (824)
+.+..++||||+++|+|.+++..... ....+++..++.++.|++.||+|||+. +|+||||||+||
T Consensus 146 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NI 222 (382)
T 3tt0_A 146 QDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNV 222 (382)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGE
T ss_pred cCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCcceE
Confidence 99999999999999999999965421 234689999999999999999999998 999999999999
Q ss_pred EEcCCCcEEEEecCCcccccCCCC-ceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHc-CCCCCCCCc
Q 003385 736 LLDKHMRAKVSDFGLSKFAVDGAS-HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEK 809 (824)
Q Consensus 736 Ll~~~~~vkL~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~ellt-G~~Pf~~~~ 809 (824)
|++.++.+||+|||+++....... .......+|+.|+|||++.+..++.++|||||||++|||++ |..||.+..
T Consensus 223 ll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~ 298 (382)
T 3tt0_A 223 LVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP 298 (382)
T ss_dssp EECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred EEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCC
Confidence 999999999999999986544322 22333457889999999999999999999999999999999 999998654
No 93
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=7.5e-34 Score=305.47 Aligned_cols=202 Identities=32% Similarity=0.545 Sum_probs=169.8
Q ss_pred HHHHHhhccccccCcEEEEEEEEc-----CCcEEEEEEeccCCcccchhhhHHHHHHhhcCCCccceeeceeec--CCeE
Q 003385 600 DATKMLEKKIGSGGFGVVYYGKLK-----DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQE--EGRS 672 (824)
Q Consensus 600 ~~~~~i~~~LG~G~fg~Vy~a~~~-----~g~~vAVK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~--~~~~ 672 (824)
...|.+.+.||+|+||.||+|++. +++.||||+++.......+.+.+|++++++++||||+++++++.. ....
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 88 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 88 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSC
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCce
Confidence 345667899999999999999852 688999999986665556788999999999999999999998854 3568
Q ss_pred EEEEEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcc
Q 003385 673 VLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSK 752 (824)
Q Consensus 673 ~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~ 752 (824)
++||||+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 89 ~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~ 162 (295)
T 3ugc_A 89 KLIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTK 162 (295)
T ss_dssp EEEEECCTTCBHHHHHHHC---GGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCSCC
T ss_pred EEEEEeCCCCCHHHHHHhc---ccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccCcccc
Confidence 9999999999999998543 34588999999999999999999998 99999999999999999999999999998
Q ss_pred cccCCCCc--eeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCC
Q 003385 753 FAVDGASH--VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISN 807 (824)
Q Consensus 753 ~~~~~~~~--~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~ 807 (824)
........ ......++..|+|||.+.+..++.++|||||||++|||++|..||..
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~ 219 (295)
T 3ugc_A 163 VLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 219 (295)
T ss_dssp -------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCS
T ss_pred cccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCC
Confidence 65433221 22334477889999999999999999999999999999999998864
No 94
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=1.1e-33 Score=327.25 Aligned_cols=202 Identities=31% Similarity=0.508 Sum_probs=176.5
Q ss_pred HHHhhccccccCcEEEEEEEEcC-CcEEEEEEeccCCcccchhhhHHHHHHhhcCCCccceeeceeecCCeEEEEEEecC
Q 003385 602 TKMLEKKIGSGGFGVVYYGKLKD-GKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 680 (824)
Q Consensus 602 ~~~i~~~LG~G~fg~Vy~a~~~~-g~~vAVK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~~ 680 (824)
.+.+.+.||+|+||.||+|.++. ++.||||+++... ...+.+.+|+++|++++||||+++++++.+.+..++||||++
T Consensus 221 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~~ 299 (495)
T 1opk_A 221 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMT 299 (495)
T ss_dssp GEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCT
T ss_pred HceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEccC
Confidence 45677899999999999999874 7899999997543 335779999999999999999999999999999999999999
Q ss_pred CCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccccCCCCc
Q 003385 681 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 760 (824)
Q Consensus 681 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~~~ 760 (824)
+|+|.+++... ....+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++........
T Consensus 300 ~g~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~ 374 (495)
T 1opk_A 300 YGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYT 374 (495)
T ss_dssp TCBHHHHHHHS--CTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEE
T ss_pred CCCHHHHHHhc--CcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccceeccCCcee
Confidence 99999999643 234588999999999999999999998 9999999999999999999999999999866443333
Q ss_pred eeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHc-CCCCCCCCc
Q 003385 761 VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEK 809 (824)
Q Consensus 761 ~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~ellt-G~~Pf~~~~ 809 (824)
......+++.|+|||++....++.++|||||||++|||++ |+.||.+..
T Consensus 375 ~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~ 424 (495)
T 1opk_A 375 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 424 (495)
T ss_dssp CCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred ecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCC
Confidence 3333456789999999999999999999999999999999 999998654
No 95
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=1.4e-33 Score=305.42 Aligned_cols=207 Identities=29% Similarity=0.473 Sum_probs=175.6
Q ss_pred HHHHHhhccccccCcEEEEEEEEc------CCcEEEEEEeccCC-cccchhhhHHHHHHhhcCCCccceeeceeecCCeE
Q 003385 600 DATKMLEKKIGSGGFGVVYYGKLK------DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRS 672 (824)
Q Consensus 600 ~~~~~i~~~LG~G~fg~Vy~a~~~------~g~~vAVK~l~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ 672 (824)
...|.+.+.||+|+||.||+|++. +++.||||+++... ....+.+.+|++++++++||||+++++++.+.+..
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 101 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL 101 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCce
Confidence 345667899999999999999862 35789999997543 23346788999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHhhcccC--------------------ccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCC
Q 003385 673 VLVYEFMHNGTLKEHLYGTLT--------------------HEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKS 732 (824)
Q Consensus 673 ~lV~E~~~~gsL~~~L~~~~~--------------------~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp 732 (824)
++||||+++++|.+++..... ....+++..++.++.|++.||.|||++ +|+||||||
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dikp 178 (314)
T 2ivs_A 102 LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLAA 178 (314)
T ss_dssp EEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEECCCCSG
T ss_pred EEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCcccccch
Confidence 999999999999999865322 124588999999999999999999998 999999999
Q ss_pred CCEEEcCCCcEEEEecCCcccccCCCCc-eeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHc-CCCCCCCCc
Q 003385 733 SNILLDKHMRAKVSDFGLSKFAVDGASH-VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEK 809 (824)
Q Consensus 733 ~NILl~~~~~vkL~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~ellt-G~~Pf~~~~ 809 (824)
+||+++.++.+||+|||+++........ ......+|+.|+|||.+.+..++.++|||||||++|||++ |+.||.+..
T Consensus 179 ~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 257 (314)
T 2ivs_A 179 RNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIP 257 (314)
T ss_dssp GGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred heEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCC
Confidence 9999999999999999999865443222 2233457889999999999999999999999999999999 999998754
No 96
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=5.9e-34 Score=316.95 Aligned_cols=207 Identities=29% Similarity=0.472 Sum_probs=174.1
Q ss_pred HHHHHhhccccccCcEEEEEEEEc------CCcEEEEEEeccC-CcccchhhhHHHHHHhhcCCCccceeeceeecCCeE
Q 003385 600 DATKMLEKKIGSGGFGVVYYGKLK------DGKEIAVKVLTSN-SYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRS 672 (824)
Q Consensus 600 ~~~~~i~~~LG~G~fg~Vy~a~~~------~g~~vAVK~l~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ 672 (824)
...+.+.+.||+|+||.||+|++. +++.||||+++.. .......+.+|+.++++++||||+++++++.+....
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 149 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 149 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 345667899999999999999853 4678999999654 233345788999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHhhccc---CccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCC---cEEEE
Q 003385 673 VLVYEFMHNGTLKEHLYGTL---THEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHM---RAKVS 746 (824)
Q Consensus 673 ~lV~E~~~~gsL~~~L~~~~---~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~---~vkL~ 746 (824)
++||||+++|+|.+++.... .....+++..++.++.|++.||+|||++ +|+||||||+|||++.++ .+||+
T Consensus 150 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kL~ 226 (367)
T 3l9p_A 150 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIG 226 (367)
T ss_dssp EEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCceEEEC
Confidence 99999999999999986532 2234688999999999999999999998 999999999999999554 59999
Q ss_pred ecCCcccccCC-CCceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHc-CCCCCCCCc
Q 003385 747 DFGLSKFAVDG-ASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEK 809 (824)
Q Consensus 747 DFGla~~~~~~-~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~ellt-G~~Pf~~~~ 809 (824)
|||+++..... .........||+.|+|||++.+..++.++|||||||++|||++ |..||.+..
T Consensus 227 DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~ 291 (367)
T 3l9p_A 227 DFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS 291 (367)
T ss_dssp CCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred CCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCC
Confidence 99999754322 1122233457999999999999999999999999999999998 999997654
No 97
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=1.8e-33 Score=311.49 Aligned_cols=210 Identities=25% Similarity=0.340 Sum_probs=178.0
Q ss_pred CHHHHHHHHHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCCcccchhhhHHHHHHhhcC-----CCccceeeceee
Q 003385 594 TLSDIEDATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIH-----HRNLVQFLGYCQ 667 (824)
Q Consensus 594 ~~~~~~~~~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~~~~~~~~~Ei~il~~l~-----HpnIv~l~~~~~ 667 (824)
..+++....|.+.++||+|+||.||+|++. +++.||||+++.. ....+.+..|+++++++. ||||+++++++.
T Consensus 28 ~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~ 106 (360)
T 3llt_A 28 KKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFM 106 (360)
T ss_dssp CTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEE
T ss_pred ecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeecccceee
Confidence 334444556778899999999999999985 6889999999643 233456778999999996 999999999999
Q ss_pred cCCeEEEEEEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcC--------
Q 003385 668 EEGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK-------- 739 (824)
Q Consensus 668 ~~~~~~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~-------- 739 (824)
..+..++||||+ +++|.+++... ....+++..+..++.||+.||+|||++ +|+||||||+|||++.
T Consensus 107 ~~~~~~lv~e~~-~~~L~~~~~~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~~ 180 (360)
T 3llt_A 107 YYDHMCLIFEPL-GPSLYEIITRN--NYNGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDDPYFEKSLI 180 (360)
T ss_dssp ETTEEEEEECCC-CCBHHHHHHHT--TTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCTTCCEEEE
T ss_pred ECCeeEEEEcCC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEcccccccccc
Confidence 999999999999 89999998543 233588899999999999999999998 9999999999999975
Q ss_pred -----------------CCcEEEEecCCcccccCCCCceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCC
Q 003385 740 -----------------HMRAKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQ 802 (824)
Q Consensus 740 -----------------~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~ 802 (824)
++.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~ 256 (360)
T 3llt_A 181 TVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY----HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGS 256 (360)
T ss_dssp EEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC----CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSS
T ss_pred chhcccccccccccccCCCCEEEEeccCceecCCC----CcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCC
Confidence 789999999999764332 23356899999999999999999999999999999999999
Q ss_pred CCCCCCccccch
Q 003385 803 EAISNEKFGANC 814 (824)
Q Consensus 803 ~Pf~~~~~~~~~ 814 (824)
.||.+....+..
T Consensus 257 ~pf~~~~~~~~~ 268 (360)
T 3llt_A 257 LLFRTHEHMEHL 268 (360)
T ss_dssp CSCCCSSHHHHH
T ss_pred CCCCCCcHHHHH
Confidence 999876644333
No 98
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=9.6e-34 Score=315.99 Aligned_cols=203 Identities=28% Similarity=0.518 Sum_probs=162.9
Q ss_pred HHHHhhccccccCcEEEEEEEEc----CCcEEEEEEeccCC-cccchhhhHHHHHHhhcCCCccceeeceeecCCeEEEE
Q 003385 601 ATKMLEKKIGSGGFGVVYYGKLK----DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLV 675 (824)
Q Consensus 601 ~~~~i~~~LG~G~fg~Vy~a~~~----~g~~vAVK~l~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV 675 (824)
..+.+.+.||+|+||.||+|+++ ++..||||+++... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 124 (373)
T 2qol_A 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 124 (373)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEE
Confidence 45567889999999999999875 56789999997543 23356789999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCccccc
Q 003385 676 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAV 755 (824)
Q Consensus 676 ~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~ 755 (824)
|||+++|+|.+++... ...+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 125 ~e~~~~~sL~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 198 (373)
T 2qol_A 125 TEYMENGSLDSFLRKH---DAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGRVLE 198 (373)
T ss_dssp EECCTTCBHHHHHHTT---TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC-------
T ss_pred EeCCCCCcHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcCccccccc
Confidence 9999999999998532 34688999999999999999999998 99999999999999999999999999998654
Q ss_pred CCCCce--eccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHc-CCCCCCCCc
Q 003385 756 DGASHV--SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEK 809 (824)
Q Consensus 756 ~~~~~~--~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~ellt-G~~Pf~~~~ 809 (824)
...... .....+++.|+|||.+....++.++|||||||++|||++ |+.||.+..
T Consensus 199 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~ 255 (373)
T 2qol_A 199 DDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMS 255 (373)
T ss_dssp ---------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCC
T ss_pred cCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCC
Confidence 432221 122235778999999999999999999999999999998 999997644
No 99
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=1.1e-33 Score=323.77 Aligned_cols=202 Identities=29% Similarity=0.506 Sum_probs=169.2
Q ss_pred HHHHhhccccccCcEEEEEEEEcCCcEEEEEEeccCCcccchhhhHHHHHHhhcCCCccceeeceeecCCeEEEEEEecC
Q 003385 601 ATKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 680 (824)
Q Consensus 601 ~~~~i~~~LG~G~fg~Vy~a~~~~g~~vAVK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~~ 680 (824)
..+.+.++||+|+||.||+|.++++..||||+++... ...+.+.+|+++|++++||||+++++++.+ +..++||||++
T Consensus 184 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~~ 261 (452)
T 1fmk_A 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMS 261 (452)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCT
T ss_pred hHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhhc
Confidence 3456788999999999999999988899999997544 235678999999999999999999999876 66899999999
Q ss_pred CCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccccCCCCc
Q 003385 681 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 760 (824)
Q Consensus 681 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~~~ 760 (824)
+|+|.+++... ....+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++........
T Consensus 262 ~gsL~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 336 (452)
T 1fmk_A 262 KGSLLDFLKGE--TGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 336 (452)
T ss_dssp TCBHHHHHSHH--HHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC--------
T ss_pred CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccceecCCCcee
Confidence 99999998532 234588999999999999999999998 9999999999999999999999999999866443322
Q ss_pred eeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHc-CCCCCCCCc
Q 003385 761 VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEK 809 (824)
Q Consensus 761 ~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~ellt-G~~Pf~~~~ 809 (824)
......+++.|+|||.+....++.++|||||||++|||++ |+.||.+..
T Consensus 337 ~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~ 386 (452)
T 1fmk_A 337 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV 386 (452)
T ss_dssp ------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC
T ss_pred cccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCC
Confidence 2333457889999999999999999999999999999999 999997644
No 100
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=8.1e-33 Score=298.94 Aligned_cols=217 Identities=39% Similarity=0.683 Sum_probs=181.1
Q ss_pred cccCHHHHHHHHHHhh--------ccccccCcEEEEEEEEcCCcEEEEEEeccCC----cccchhhhHHHHHHhhcCCCc
Q 003385 591 HCFTLSDIEDATKMLE--------KKIGSGGFGVVYYGKLKDGKEIAVKVLTSNS----YQGKREFTNEVTLLSRIHHRN 658 (824)
Q Consensus 591 ~~~~~~~~~~~~~~i~--------~~LG~G~fg~Vy~a~~~~g~~vAVK~l~~~~----~~~~~~~~~Ei~il~~l~Hpn 658 (824)
+.++..++...+..+. +.||+|+||.||+|++ +++.||||++.... ....+.+.+|++++++++|||
T Consensus 13 ~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 91 (307)
T 2nru_A 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHEN 91 (307)
T ss_dssp EECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTT
T ss_pred CcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCC
Confidence 4567777777665543 6799999999999986 58899999986532 122456889999999999999
Q ss_pred cceeeceeecCCeEEEEEEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEc
Q 003385 659 LVQFLGYCQEEGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLD 738 (824)
Q Consensus 659 Iv~l~~~~~~~~~~~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~ 738 (824)
|+++++++.+.+..++||||+++++|.+++... .....+++..++.++.|++.||.|||++ +|+||||||+||+++
T Consensus 92 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nili~ 167 (307)
T 2nru_A 92 LVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCL-DGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLD 167 (307)
T ss_dssp BCCEEEEECSSSSCEEEEECCTTCBHHHHHHTG-GGCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEC
T ss_pred eEEEEEEEecCCceEEEEEecCCCcHHHHHHhc-cCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEc
Confidence 999999999999999999999999999998543 2345689999999999999999999998 999999999999999
Q ss_pred CCCcEEEEecCCcccccCCCCc-eeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCCCccccc
Q 003385 739 KHMRAKVSDFGLSKFAVDGASH-VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGAN 813 (824)
Q Consensus 739 ~~~~vkL~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~~~~~~~ 813 (824)
.++.+||+|||+++........ ......||+.|+|||.+.+ .++.++|||||||++|||++|+.||.+....+.
T Consensus 168 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~ 242 (307)
T 2nru_A 168 EAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQL 242 (307)
T ss_dssp TTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSB
T ss_pred CCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHH
Confidence 9999999999999765433222 2334568999999998764 588999999999999999999999987654433
No 101
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=3.5e-33 Score=303.10 Aligned_cols=196 Identities=28% Similarity=0.428 Sum_probs=164.9
Q ss_pred hccccccCcEEEEEEEEc-CCcEEEEEEeccCCcccchhhhHHHHHHhhc-CCCccceeeceeecCCeEEEEEEecCCCC
Q 003385 606 EKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVYEFMHNGT 683 (824)
Q Consensus 606 ~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~lV~E~~~~gs 683 (824)
.+.||+|+||.||+|++. +++.||||+++.......+.+.+|++++.++ +||||+++++++.+.+..++||||+++++
T Consensus 18 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 97 (316)
T 2ac3_A 18 EDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGS 97 (316)
T ss_dssp CCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTCB
T ss_pred CceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEcCCCCc
Confidence 468999999999999865 6899999999766555567789999999985 79999999999999999999999999999
Q ss_pred HHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCc---EEEEecCCcccccCCC--
Q 003385 684 LKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMR---AKVSDFGLSKFAVDGA-- 758 (824)
Q Consensus 684 L~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~---vkL~DFGla~~~~~~~-- 758 (824)
|.+++.. ...+++..+..++.|++.||+|||++ +|+||||||+|||++.++. +||+|||+++......
T Consensus 98 L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~ 170 (316)
T 2ac3_A 98 ILSHIHK----RRHFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDC 170 (316)
T ss_dssp HHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCTTCCC--------
T ss_pred HHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCcc
Confidence 9999853 34688999999999999999999998 9999999999999998765 9999999987543211
Q ss_pred ----CceeccccCCCCCcchhcccc-----CCCCchHHHHHHHHHHHHHHcCCCCCCCC
Q 003385 759 ----SHVSSIVRGTVGYLDPEYYIS-----QQLTDKSDVYSFGVILLELISGQEAISNE 808 (824)
Q Consensus 759 ----~~~~~~~~gt~~y~aPE~l~~-----~~~~~~~DIwSlGvil~elltG~~Pf~~~ 808 (824)
.......+||+.|+|||++.. ..++.++|||||||++|||++|+.||.+.
T Consensus 171 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~ 229 (316)
T 2ac3_A 171 SPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGR 229 (316)
T ss_dssp -----------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCC
T ss_pred ccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCccc
Confidence 111223459999999999875 55789999999999999999999999764
No 102
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=1.6e-33 Score=300.89 Aligned_cols=203 Identities=24% Similarity=0.388 Sum_probs=161.3
Q ss_pred HHHHhhccccccCcEEEEEEEEcC----CcEEEEEEeccCC-cccchhhhHHHHHHhhcCCCccceeeceeecCCeEEEE
Q 003385 601 ATKMLEKKIGSGGFGVVYYGKLKD----GKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLV 675 (824)
Q Consensus 601 ~~~~i~~~LG~G~fg~Vy~a~~~~----g~~vAVK~l~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV 675 (824)
.+|.+.+.||+|+||.||+|.+.. +..||+|+++... ....+.+.+|+.++++++||||+++++++. .+..++|
T Consensus 15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~lv 93 (281)
T 1mp8_A 15 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWII 93 (281)
T ss_dssp GGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEEE
T ss_pred HHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEEE
Confidence 456678999999999999998753 4569999987543 233467889999999999999999999985 4567899
Q ss_pred EEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCccccc
Q 003385 676 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAV 755 (824)
Q Consensus 676 ~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~ 755 (824)
|||+++++|.+++... ...+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 94 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 167 (281)
T 1mp8_A 94 MELCTLGELRSFLQVR---KYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME 167 (281)
T ss_dssp EECCTTEEHHHHHHHT---TTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC--------
T ss_pred EecCCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECccccccccC
Confidence 9999999999998532 34588999999999999999999998 99999999999999999999999999998665
Q ss_pred CCCCceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHc-CCCCCCCCcc
Q 003385 756 DGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKF 810 (824)
Q Consensus 756 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~ellt-G~~Pf~~~~~ 810 (824)
...........+|+.|+|||.+....++.++|||||||++|||++ |..||.+...
T Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~ 223 (281)
T 1mp8_A 168 DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN 223 (281)
T ss_dssp -----------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCG
T ss_pred cccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCH
Confidence 443333334457889999999999999999999999999999996 9999987543
No 103
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=2.6e-33 Score=298.54 Aligned_cols=202 Identities=28% Similarity=0.502 Sum_probs=174.2
Q ss_pred HHHHhhccccccCcEEEEEEEEcCCcEEEEEEeccCCcccchhhhHHHHHHhhcCCCccceeeceeecCCeEEEEEEecC
Q 003385 601 ATKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 680 (824)
Q Consensus 601 ~~~~i~~~LG~G~fg~Vy~a~~~~g~~vAVK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~~ 680 (824)
..+.+.+.||+|+||.||+|++++++.||||+++... ...+.+.+|++++++++||||+++++++.+ +..++||||++
T Consensus 13 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~~ 90 (279)
T 1qpc_A 13 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYME 90 (279)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEECCT
T ss_pred HhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEEecCC
Confidence 3456788999999999999999888899999997543 235678999999999999999999999875 45789999999
Q ss_pred CCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccccCCCCc
Q 003385 681 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 760 (824)
Q Consensus 681 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~~~ 760 (824)
+++|.+++... ....+++..+..++.|++.||.|||++ +|+||||||+||++++++.+||+|||+++........
T Consensus 91 ~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 165 (279)
T 1qpc_A 91 NGSLVDFLKTP--SGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT 165 (279)
T ss_dssp TCBHHHHTTSH--HHHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEE
T ss_pred CCCHHHHHhcC--CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCcccccccCcccc
Confidence 99999998532 223688999999999999999999998 9999999999999999999999999999876544333
Q ss_pred eeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHc-CCCCCCCCc
Q 003385 761 VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEK 809 (824)
Q Consensus 761 ~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~ellt-G~~Pf~~~~ 809 (824)
......++..|+|||.+....++.++|||||||++|||++ |+.||.+..
T Consensus 166 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~ 215 (279)
T 1qpc_A 166 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT 215 (279)
T ss_dssp CCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCC
T ss_pred cccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccC
Confidence 3334457889999999998899999999999999999999 999997644
No 104
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=5.6e-33 Score=317.58 Aligned_cols=197 Identities=32% Similarity=0.517 Sum_probs=169.6
Q ss_pred HHHhhccccccCcEEEEEEEEcCCcEEEEEEeccCCcccchhhhHHHHHHhhcCCCccceeeceeecCC-eEEEEEEecC
Q 003385 602 TKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEG-RSVLVYEFMH 680 (824)
Q Consensus 602 ~~~i~~~LG~G~fg~Vy~a~~~~g~~vAVK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~-~~~lV~E~~~ 680 (824)
.+.+.+.||+|+||.||+|+++ ++.||||+++... ..+.+.+|+++|++++||||+++++++.+.+ ..++||||++
T Consensus 194 ~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~~ 270 (450)
T 1k9a_A 194 ELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMA 270 (450)
T ss_dssp GEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECCT
T ss_pred HeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEecC
Confidence 3456789999999999999987 7899999997543 4577999999999999999999999987654 7899999999
Q ss_pred CCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccccCCCCc
Q 003385 681 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 760 (824)
Q Consensus 681 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~~~ 760 (824)
+|+|.+++... ....+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 271 ~g~L~~~l~~~--~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~--- 342 (450)
T 1k9a_A 271 KGSLVDYLRSR--GRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST--- 342 (450)
T ss_dssp TCBHHHHHHHH--CTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred CCcHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCccccccc---
Confidence 99999999643 223468889999999999999999998 9999999999999999999999999999754321
Q ss_pred eeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHc-CCCCCCCCcc
Q 003385 761 VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEKF 810 (824)
Q Consensus 761 ~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~ellt-G~~Pf~~~~~ 810 (824)
.....+++.|+|||.+....++.++|||||||++|||++ |+.||.+...
T Consensus 343 -~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~ 392 (450)
T 1k9a_A 343 -QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL 392 (450)
T ss_dssp -----CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCT
T ss_pred -ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 122357889999999999999999999999999999998 9999987543
No 105
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.4e-33 Score=306.32 Aligned_cols=208 Identities=24% Similarity=0.377 Sum_probs=168.5
Q ss_pred HHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCCcc-cchhhhHHHHHHhhcCCCccceeeceeecCCeEEEEEEecC
Q 003385 603 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ-GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 680 (824)
Q Consensus 603 ~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~~-~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~~ 680 (824)
|.+.+.||+|+||.||+|++. +++.||||+++..... ....+.+|++++++++||||+++++++.+.+..++||||++
T Consensus 4 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 83 (324)
T 3mtl_A 4 YIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD 83 (324)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEECCS
T ss_pred eEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecccc
Confidence 456789999999999999986 6889999999754322 23456789999999999999999999999999999999997
Q ss_pred CCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccccCCCCc
Q 003385 681 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 760 (824)
Q Consensus 681 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~~~ 760 (824)
|+|.+++... ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 84 -~~l~~~~~~~---~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~- 155 (324)
T 3mtl_A 84 -KDLKQYLDDC---GNIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTK- 155 (324)
T ss_dssp -EEHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEECC------
T ss_pred -cCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCcccccccCCcc-
Confidence 5888887532 34588899999999999999999998 999999999999999999999999999875443222
Q ss_pred eeccccCCCCCcchhcccc-CCCCchHHHHHHHHHHHHHHcCCCCCCCCccccchhcHh
Q 003385 761 VSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIV 818 (824)
Q Consensus 761 ~~~~~~gt~~y~aPE~l~~-~~~~~~~DIwSlGvil~elltG~~Pf~~~~~~~~~~~iv 818 (824)
......||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+....+....+.
T Consensus 156 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~ 214 (324)
T 3mtl_A 156 TYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIF 214 (324)
T ss_dssp -------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH
T ss_pred ccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 2233468999999999876 568999999999999999999999998876554444443
No 106
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=2e-33 Score=306.14 Aligned_cols=207 Identities=27% Similarity=0.443 Sum_probs=159.9
Q ss_pred HHHHHhhccccccCcEEEEEEEEcCCc----EEEEEEeccC--CcccchhhhHHHHHHhhcCCCccceeeceeecCCeE-
Q 003385 600 DATKMLEKKIGSGGFGVVYYGKLKDGK----EIAVKVLTSN--SYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRS- 672 (824)
Q Consensus 600 ~~~~~i~~~LG~G~fg~Vy~a~~~~g~----~vAVK~l~~~--~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~- 672 (824)
...|.+.+.||+|+||.||+|++.... .||||+++.. .....+.+.+|++++++++||||+++++++......
T Consensus 22 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 101 (323)
T 3qup_A 22 EQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKG 101 (323)
T ss_dssp ---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC----
T ss_pred hhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccccc
Confidence 345677899999999999999866432 7999999754 233356789999999999999999999999876655
Q ss_pred -----EEEEEecCCCCHHHHhhcccC--ccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEE
Q 003385 673 -----VLVYEFMHNGTLKEHLYGTLT--HEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKV 745 (824)
Q Consensus 673 -----~lV~E~~~~gsL~~~L~~~~~--~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL 745 (824)
++||||+++|+|.+++..... ....+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||
T Consensus 102 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~~~kl 178 (323)
T 3qup_A 102 RLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCV 178 (323)
T ss_dssp ---CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEE
T ss_pred CCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCCCEEE
Confidence 899999999999999854321 223588999999999999999999998 9999999999999999999999
Q ss_pred EecCCcccccCCCCc-eeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHc-CCCCCCCCc
Q 003385 746 SDFGLSKFAVDGASH-VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEK 809 (824)
Q Consensus 746 ~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~ellt-G~~Pf~~~~ 809 (824)
+|||+++........ ......+++.|+|||.+.+..++.++|||||||++|||++ |+.||.+..
T Consensus 179 ~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~ 244 (323)
T 3qup_A 179 ADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIE 244 (323)
T ss_dssp CCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC
T ss_pred eeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccC
Confidence 999999765433221 2223446789999999999999999999999999999999 999998754
No 107
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=4.3e-33 Score=301.71 Aligned_cols=203 Identities=26% Similarity=0.368 Sum_probs=168.5
Q ss_pred HHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCCcc--cchhhhHHHHHHhhcCCCccceeeceeecCCeEEEEEEec
Q 003385 603 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ--GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 679 (824)
Q Consensus 603 ~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~~--~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~ 679 (824)
|.+.+.||+|+||.||+|++. +++.||||++...... ..+.+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 5 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (311)
T 4agu_A 5 YEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYC 84 (311)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred ceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEEeC
Confidence 456789999999999999986 5899999998654322 2456789999999999999999999999999999999999
Q ss_pred CCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccccCCCC
Q 003385 680 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 759 (824)
Q Consensus 680 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~~ 759 (824)
++++|.+++.. ...+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.......
T Consensus 85 ~~~~l~~~~~~----~~~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 157 (311)
T 4agu_A 85 DHTVLHELDRY----QRGVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSD 157 (311)
T ss_dssp SEEHHHHHHHT----SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC----
T ss_pred CCchHHHHHhh----hcCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCchhccCccc
Confidence 99999887742 35588999999999999999999998 999999999999999999999999999976543322
Q ss_pred ceeccccCCCCCcchhcccc-CCCCchHHHHHHHHHHHHHHcCCCCCCCCccccc
Q 003385 760 HVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGAN 813 (824)
Q Consensus 760 ~~~~~~~gt~~y~aPE~l~~-~~~~~~~DIwSlGvil~elltG~~Pf~~~~~~~~ 813 (824)
......||+.|+|||.+.+ ..++.++||||+||++|||++|+.||.+....+.
T Consensus 158 -~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~ 211 (311)
T 4agu_A 158 -YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQ 211 (311)
T ss_dssp ---------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred -ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 2234468999999999876 6789999999999999999999999988664433
No 108
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=1.1e-33 Score=312.83 Aligned_cols=208 Identities=30% Similarity=0.464 Sum_probs=173.9
Q ss_pred HHHHHHhhccccccCcEEEEEEEEc------CCcEEEEEEeccCCc-ccchhhhHHHHHHhhc-CCCccceeeceeecCC
Q 003385 599 EDATKMLEKKIGSGGFGVVYYGKLK------DGKEIAVKVLTSNSY-QGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEG 670 (824)
Q Consensus 599 ~~~~~~i~~~LG~G~fg~Vy~a~~~------~g~~vAVK~l~~~~~-~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~ 670 (824)
....|.+.+.||+|+||.||+|++. +++.||||+++.... ...+.+.+|+++++++ +||||+++++++.+.+
T Consensus 20 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 99 (359)
T 3vhe_A 20 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG 99 (359)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTT
T ss_pred cccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCC
Confidence 3455677899999999999999753 457899999975432 2346789999999999 7999999999987754
Q ss_pred -eEEEEEEecCCCCHHHHhhcccCc-------------------------------------------------------
Q 003385 671 -RSVLVYEFMHNGTLKEHLYGTLTH------------------------------------------------------- 694 (824)
Q Consensus 671 -~~~lV~E~~~~gsL~~~L~~~~~~------------------------------------------------------- 694 (824)
..++||||+++|+|.+++......
T Consensus 100 ~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (359)
T 3vhe_A 100 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEE 179 (359)
T ss_dssp SCCEEEEECCTTEEHHHHHHTTTTSBCSCC--------------------------------------------------
T ss_pred CceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhc
Confidence 489999999999999999654221
Q ss_pred -------cccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccccCCCC-ceecccc
Q 003385 695 -------EQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS-HVSSIVR 766 (824)
Q Consensus 695 -------~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~~-~~~~~~~ 766 (824)
...+++..++.++.|++.||.|||++ +|+||||||+|||++.++.+||+|||+++....... .......
T Consensus 180 ~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~ 256 (359)
T 3vhe_A 180 EAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 256 (359)
T ss_dssp ----CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CE
T ss_pred ccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccC
Confidence 12288999999999999999999998 999999999999999999999999999986543322 2334456
Q ss_pred CCCCCcchhccccCCCCchHHHHHHHHHHHHHHc-CCCCCCCCc
Q 003385 767 GTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEK 809 (824)
Q Consensus 767 gt~~y~aPE~l~~~~~~~~~DIwSlGvil~ellt-G~~Pf~~~~ 809 (824)
||+.|+|||++.+..++.++|||||||++|||++ |+.||.+..
T Consensus 257 ~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~ 300 (359)
T 3vhe_A 257 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK 300 (359)
T ss_dssp ECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred CCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccc
Confidence 8899999999999999999999999999999998 999998754
No 109
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=9.7e-33 Score=299.77 Aligned_cols=204 Identities=23% Similarity=0.299 Sum_probs=168.0
Q ss_pred CHHHHHHHHHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCCc--ccchhhhHHHHHHhhc-CCCccceeeceeecC
Q 003385 594 TLSDIEDATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY--QGKREFTNEVTLLSRI-HHRNLVQFLGYCQEE 669 (824)
Q Consensus 594 ~~~~~~~~~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~--~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~ 669 (824)
..+++....|.+.++||+|+||+||+|+++ +++.||||++..... ........|+..+.++ +||||+++++++.+.
T Consensus 50 ~~~~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~ 129 (311)
T 3p1a_A 50 RPESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEG 129 (311)
T ss_dssp SSSCHHHHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET
T ss_pred CccchhhhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeC
Confidence 345666778888999999999999999987 789999999865422 2233445566555555 899999999999999
Q ss_pred CeEEEEEEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecC
Q 003385 670 GRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFG 749 (824)
Q Consensus 670 ~~~~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFG 749 (824)
+..++||||+ +++|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 130 ~~~~lv~e~~-~~~L~~~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG 202 (311)
T 3p1a_A 130 GILYLQTELC-GPSLQQHCEAW---GASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFG 202 (311)
T ss_dssp TEEEEEEECC-CCBHHHHHHHH---CSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCT
T ss_pred CEEEEEEecc-CCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccce
Confidence 9999999999 67898887543 34689999999999999999999998 99999999999999999999999999
Q ss_pred CcccccCCCCceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCC
Q 003385 750 LSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISN 807 (824)
Q Consensus 750 la~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~ 807 (824)
+++..... .......||+.|+|||++.+ .++.++|||||||++|||++|..|+.+
T Consensus 203 ~a~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~ 257 (311)
T 3p1a_A 203 LLVELGTA--GAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHG 257 (311)
T ss_dssp TCEECC--------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSS
T ss_pred eeeecccC--CCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 98765432 22334569999999998875 789999999999999999999776654
No 110
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.8e-33 Score=313.14 Aligned_cols=208 Identities=25% Similarity=0.348 Sum_probs=172.8
Q ss_pred HHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCCcccchhhhHHHHHHhhcCCCccceeeceeec------------
Q 003385 602 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQE------------ 668 (824)
Q Consensus 602 ~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~------------ 668 (824)
+|.+.+.||+|+||.||+|++. +|+.||||++... .+...+|+++++.++||||+++++++..
T Consensus 8 ~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~----~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~ 83 (383)
T 3eb0_A 8 KYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQD----PRYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPP 83 (383)
T ss_dssp TEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECC----TTSCCHHHHHHTTCCCTTBCCEEEEEEEC-----------
T ss_pred eEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecC----cchHHHHHHHHHHcCCCCccchhheeeecCcccccccccc
Confidence 4667899999999999999875 7899999998643 3345689999999999999999999843
Q ss_pred --------------------------CCeEEEEEEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCC
Q 003385 669 --------------------------EGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCV 722 (824)
Q Consensus 669 --------------------------~~~~~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~ 722 (824)
....++||||++ |+|.+.+.........+++..+..++.|++.||.|||+.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-- 160 (383)
T 3eb0_A 84 DDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSL-- 160 (383)
T ss_dssp --------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT--
T ss_pred cccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC--
Confidence 334889999998 588888765545567789999999999999999999998
Q ss_pred CCeEecCCCCCCEEEc-CCCcEEEEecCCcccccCCCCceeccccCCCCCcchhccccC-CCCchHHHHHHHHHHHHHHc
Q 003385 723 PAIIHRDLKSSNILLD-KHMRAKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQ-QLTDKSDVYSFGVILLELIS 800 (824)
Q Consensus 723 ~gIvHrDLkp~NILl~-~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~~DIwSlGvil~ellt 800 (824)
||+||||||+|||++ .++.+||+|||+++....... .....||+.|+|||.+.+. .++.++||||+||++|||++
T Consensus 161 -gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~ 237 (383)
T 3eb0_A 161 -GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP--SVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELIL 237 (383)
T ss_dssp -TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSC--CCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHH
T ss_pred -cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCC--CcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHh
Confidence 999999999999998 679999999999986544322 2334589999999998765 48999999999999999999
Q ss_pred CCCCCCCCccccchhcHhh
Q 003385 801 GQEAISNEKFGANCRNIVQ 819 (824)
Q Consensus 801 G~~Pf~~~~~~~~~~~iv~ 819 (824)
|+.||.+....+...++++
T Consensus 238 g~~pf~~~~~~~~~~~i~~ 256 (383)
T 3eb0_A 238 GKPLFSGETSIDQLVRIIQ 256 (383)
T ss_dssp SSCSSCCSSHHHHHHHHHH
T ss_pred CCCCCCCCChHHHHHHHHH
Confidence 9999998765555555543
No 111
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=3e-33 Score=310.62 Aligned_cols=201 Identities=18% Similarity=0.298 Sum_probs=165.1
Q ss_pred HHHHhhccccccCcEEEEEEEEcC------CcEEEEEEeccCCccc-----------chhhhHHHHHHhhcCCCccceee
Q 003385 601 ATKMLEKKIGSGGFGVVYYGKLKD------GKEIAVKVLTSNSYQG-----------KREFTNEVTLLSRIHHRNLVQFL 663 (824)
Q Consensus 601 ~~~~i~~~LG~G~fg~Vy~a~~~~------g~~vAVK~l~~~~~~~-----------~~~~~~Ei~il~~l~HpnIv~l~ 663 (824)
..|.+.+.||+|+||.||+|.++. ++.||||++....... ...+.+|+..++.++||||++++
T Consensus 35 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~ 114 (364)
T 3op5_A 35 AAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYW 114 (364)
T ss_dssp CEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEE
T ss_pred CeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEE
Confidence 356678999999999999998864 4789999987543211 12234566677778899999999
Q ss_pred ceeecC----CeEEEEEEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEc-
Q 003385 664 GYCQEE----GRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLD- 738 (824)
Q Consensus 664 ~~~~~~----~~~~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~- 738 (824)
+++... ...++||||+ +++|.+++... ...+++..++.++.||+.||+|||++ +|+||||||+|||++
T Consensus 115 ~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~---~~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nill~~ 187 (364)
T 3op5_A 115 GSGLHDKNGKSYRFMIMDRF-GSDLQKIYEAN---AKRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLLNY 187 (364)
T ss_dssp EEEEEEETTEEEEEEEEECE-EEEHHHHHHHT---TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEES
T ss_pred eeeeeccCCcceEEEEEeCC-CCCHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEEEec
Confidence 998764 4579999999 99999998542 35689999999999999999999998 999999999999999
Q ss_pred -CCCcEEEEecCCcccccCCCCc------eeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCCC
Q 003385 739 -KHMRAKVSDFGLSKFAVDGASH------VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNE 808 (824)
Q Consensus 739 -~~~~vkL~DFGla~~~~~~~~~------~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~~ 808 (824)
.++.+||+|||+++........ ......||+.|+|||++.+..++.++|||||||++|||++|+.||.+.
T Consensus 188 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~ 264 (364)
T 3op5_A 188 KNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDN 264 (364)
T ss_dssp SCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGG
T ss_pred CCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCcccc
Confidence 8899999999999765432111 113345999999999999999999999999999999999999999863
No 112
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=3.8e-33 Score=301.49 Aligned_cols=200 Identities=28% Similarity=0.476 Sum_probs=172.7
Q ss_pred HHHHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCCcccchhhhHHHHHHhhcCCCccceeeceeecCCeEEEEEEe
Q 003385 600 DATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 678 (824)
Q Consensus 600 ~~~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~ 678 (824)
...|.+.+.||+|+||.||+|+.. +|+.||+|+++.......+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQL 87 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEc
Confidence 456778899999999999999986 6899999999865544556788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEE---cCCCcEEEEecCCccccc
Q 003385 679 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILL---DKHMRAKVSDFGLSKFAV 755 (824)
Q Consensus 679 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl---~~~~~vkL~DFGla~~~~ 755 (824)
+++++|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+||++ +.++.+||+|||+++...
T Consensus 88 ~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~ 160 (304)
T 2jam_A 88 VSGGELFDRILE----RGVYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQ 160 (304)
T ss_dssp CCSCBHHHHHHH----HSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCC
T ss_pred CCCccHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCCcceecC
Confidence 999999998843 34688999999999999999999998 99999999999999 678999999999987543
Q ss_pred CCCCceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCCCc
Q 003385 756 DGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEK 809 (824)
Q Consensus 756 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~~~ 809 (824)
.. ......||+.|+|||.+.+..++.++||||+||++|||++|+.||.+..
T Consensus 161 ~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 211 (304)
T 2jam_A 161 NG---IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEET 211 (304)
T ss_dssp CB---TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred CC---ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCC
Confidence 22 2233458999999999999999999999999999999999999997643
No 113
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=1.4e-33 Score=301.99 Aligned_cols=205 Identities=31% Similarity=0.511 Sum_probs=178.9
Q ss_pred HHHHHHhhccccccCcEEEEEEEEcC-CcEEEEEEeccCCcccchhhhHHHHHHhhcCCCccceeeceeecCCeEEEEEE
Q 003385 599 EDATKMLEKKIGSGGFGVVYYGKLKD-GKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYE 677 (824)
Q Consensus 599 ~~~~~~i~~~LG~G~fg~Vy~a~~~~-g~~vAVK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E 677 (824)
....+.+.+.||+|+||.||+|.++. ++.||+|+++... ...+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 89 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE 89 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEE
Confidence 33456678899999999999999874 7889999997543 335678899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccccCC
Q 003385 678 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 757 (824)
Q Consensus 678 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~~~ 757 (824)
|+++++|.+++... ....+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++......
T Consensus 90 ~~~~~~L~~~~~~~--~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~ 164 (288)
T 3kfa_A 90 FMTYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 164 (288)
T ss_dssp CCTTEEHHHHHHHC--CTTTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSS
T ss_pred cCCCCcHHHHHHhc--ccCCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCccceeccCC
Confidence 99999999998543 235588999999999999999999998 9999999999999999999999999999876554
Q ss_pred CCceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHc-CCCCCCCCc
Q 003385 758 ASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEK 809 (824)
Q Consensus 758 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~ellt-G~~Pf~~~~ 809 (824)
.........+|+.|+|||.+....++.++|||||||++|+|++ |..||.+..
T Consensus 165 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~ 217 (288)
T 3kfa_A 165 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 217 (288)
T ss_dssp SSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred ccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC
Confidence 4444444557889999999999999999999999999999999 999998654
No 114
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=8.2e-33 Score=295.14 Aligned_cols=201 Identities=28% Similarity=0.441 Sum_probs=172.9
Q ss_pred HHHHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCCcc------cchhhhHHHHHHhhcCCCccceeeceeecCCeE
Q 003385 600 DATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ------GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRS 672 (824)
Q Consensus 600 ~~~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~~------~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ 672 (824)
...|.+.+.||+|+||.||+|++. +++.||+|+++..... ..+.+.+|++++++++||||+++++++.+.+..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 83 (283)
T 3bhy_A 4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDV 83 (283)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeE
Confidence 345778899999999999999987 6899999998754321 245688999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCC----cEEEEec
Q 003385 673 VLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHM----RAKVSDF 748 (824)
Q Consensus 673 ~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~----~vkL~DF 748 (824)
++||||+++++|.+++.. ...+++..+..++.|++.||.|||++ +|+||||||+||+++.++ .+||+||
T Consensus 84 ~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~kl~df 156 (283)
T 3bhy_A 84 VLILELVSGGELFDFLAE----KESLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDF 156 (283)
T ss_dssp EEEEECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCEEECCC
T ss_pred EEEEeecCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCceEEEec
Confidence 999999999999999843 35688999999999999999999998 999999999999998876 8999999
Q ss_pred CCcccccCCCCceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCCCc
Q 003385 749 GLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEK 809 (824)
Q Consensus 749 Gla~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~~~ 809 (824)
|++....... ......|++.|+|||.+....++.++||||||+++|||++|+.||.+..
T Consensus 157 g~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 215 (283)
T 3bhy_A 157 GIAHKIEAGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGET 215 (283)
T ss_dssp TTCEECC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred ccceeccCCC--cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcc
Confidence 9997654322 2233458999999999999999999999999999999999999998654
No 115
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=3.7e-33 Score=295.83 Aligned_cols=199 Identities=34% Similarity=0.520 Sum_probs=160.5
Q ss_pred HHHhhccccccCcEEEEEEEEcCCcEEEEEEeccCCcc----cchhhhHHHHHHhhcCCCccceeeceeecCCeEEEEEE
Q 003385 602 TKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQ----GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYE 677 (824)
Q Consensus 602 ~~~i~~~LG~G~fg~Vy~a~~~~g~~vAVK~l~~~~~~----~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E 677 (824)
.+.+.+.||+|+||.||+|++. ++.||||+++..... ..+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 8 ~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 86 (271)
T 3dtc_A 8 ELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVME 86 (271)
T ss_dssp SEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEEE
T ss_pred heeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEE
Confidence 3456789999999999999986 889999998754322 23568899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcC--------CCcEEEEecC
Q 003385 678 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK--------HMRAKVSDFG 749 (824)
Q Consensus 678 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~--------~~~vkL~DFG 749 (824)
|+++++|.+++. ...+++..+..++.|++.||.|||++...+|+||||||+|||++. ++.+||+|||
T Consensus 87 ~~~~~~L~~~~~-----~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg 161 (271)
T 3dtc_A 87 FARGGPLNRVLS-----GKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFG 161 (271)
T ss_dssp CCTTEEHHHHHT-----SSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCC
T ss_pred cCCCCCHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCC
Confidence 999999999884 346889999999999999999999982222999999999999986 6789999999
Q ss_pred CcccccCCCCceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCCCc
Q 003385 750 LSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEK 809 (824)
Q Consensus 750 la~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~~~ 809 (824)
+++...... .....||+.|+|||.+.+..++.++|||||||++|||++|+.||.+..
T Consensus 162 ~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~ 218 (271)
T 3dtc_A 162 LAREWHRTT---KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGID 218 (271)
T ss_dssp C----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSC
T ss_pred ccccccccc---ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 997654322 223468999999999999999999999999999999999999997633
No 116
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=7.7e-33 Score=297.40 Aligned_cols=200 Identities=22% Similarity=0.378 Sum_probs=174.1
Q ss_pred HHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCC---cccchhhhHHHHHHhhcCCCccceeeceeecCCeEEEEEE
Q 003385 602 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYE 677 (824)
Q Consensus 602 ~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~---~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E 677 (824)
+|.+.+.||+|+||.||+|++. +++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 16 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 95 (294)
T 2rku_A 16 RYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLE 95 (294)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred ceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEEe
Confidence 3556789999999999999987 57889999986542 2234568899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccccCC
Q 003385 678 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 757 (824)
Q Consensus 678 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~~~ 757 (824)
|+++++|.+++.. ...+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 96 ~~~~~~L~~~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~ 168 (294)
T 2rku_A 96 LCRRRSLLELHKR----RKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD 168 (294)
T ss_dssp CCTTCBHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCST
T ss_pred cCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEeccCceecccC
Confidence 9999999998743 35688999999999999999999998 9999999999999999999999999999765432
Q ss_pred CCceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCCCc
Q 003385 758 ASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEK 809 (824)
Q Consensus 758 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~~~ 809 (824)
.. ......||+.|+|||.+.+..++.++||||+|+++|||++|+.||....
T Consensus 169 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~ 219 (294)
T 2rku_A 169 GE-RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSC 219 (294)
T ss_dssp TC-CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred cc-ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 22 2234568999999999998899999999999999999999999998754
No 117
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=1.4e-33 Score=307.85 Aligned_cols=200 Identities=31% Similarity=0.458 Sum_probs=167.1
Q ss_pred HHHhhccccccCcEEEEEEEEcCCcEEEEEEeccCCcccchhhhHHHHHHhhcCCCccceeeceeecCC----eEEEEEE
Q 003385 602 TKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEG----RSVLVYE 677 (824)
Q Consensus 602 ~~~i~~~LG~G~fg~Vy~a~~~~g~~vAVK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~----~~~lV~E 677 (824)
.|.+.+.||+|+||.||+|++. ++.||||+++.... ......+|+.++++++||||+++++++.+.. ..++|||
T Consensus 25 ~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e 102 (322)
T 3soc_A 25 PLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDK-QSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITA 102 (322)
T ss_dssp EEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEE
T ss_pred hchhhheecccCceEEEEEEEC-CCEEEEEEeecCch-HHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEEe
Confidence 4567889999999999999887 79999999965432 2345567899999999999999999997743 4699999
Q ss_pred ecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCC-------CCCeEecCCCCCCEEEcCCCcEEEEecCC
Q 003385 678 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGC-------VPAIIHRDLKSSNILLDKHMRAKVSDFGL 750 (824)
Q Consensus 678 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~-------~~gIvHrDLkp~NILl~~~~~vkL~DFGl 750 (824)
|+++|+|.+++.. ..+++..+..++.|++.||+|||+.+ .++|+||||||+|||++.++.+||+|||+
T Consensus 103 ~~~~g~L~~~l~~-----~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~ 177 (322)
T 3soc_A 103 FHEKGSLSDFLKA-----NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGL 177 (322)
T ss_dssp CCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred cCCCCCHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCc
Confidence 9999999999853 34889999999999999999999851 23899999999999999999999999999
Q ss_pred cccccCCCCc-eeccccCCCCCcchhccccC-----CCCchHHHHHHHHHHHHHHcCCCCCCCC
Q 003385 751 SKFAVDGASH-VSSIVRGTVGYLDPEYYISQ-----QLTDKSDVYSFGVILLELISGQEAISNE 808 (824)
Q Consensus 751 a~~~~~~~~~-~~~~~~gt~~y~aPE~l~~~-----~~~~~~DIwSlGvil~elltG~~Pf~~~ 808 (824)
++........ ......||+.|+|||++.+. .++.++|||||||++|||++|+.||.+.
T Consensus 178 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~ 241 (322)
T 3soc_A 178 ALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGP 241 (322)
T ss_dssp CEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSC
T ss_pred ccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCC
Confidence 9765443222 22335699999999998863 4556789999999999999999999764
No 118
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=3.6e-33 Score=297.03 Aligned_cols=197 Identities=24% Similarity=0.458 Sum_probs=150.4
Q ss_pred HHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCCc---ccchhhhHHHHHHhhcCCCccceeeceeecCCeEEEEEEe
Q 003385 603 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY---QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 678 (824)
Q Consensus 603 ~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~---~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~ 678 (824)
|.+.+.||+|+||.||+|++. +++.||+|++..... ...+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 15 y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 94 (275)
T 2eue_A 15 YQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY 94 (275)
T ss_dssp BCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred eEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEehh
Confidence 556789999999999999865 688999999975432 2245688999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccccCCC
Q 003385 679 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 758 (824)
Q Consensus 679 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~ 758 (824)
+ +++|.+.+.. ...+++..+..++.|++.||.|||++ +|+||||||+||++++++.+||+|||+++......
T Consensus 95 ~-~~~l~~~~~~----~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 166 (275)
T 2eue_A 95 A-GNELFDYIVQ----RDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN 166 (275)
T ss_dssp C-CEEHHHHHHT----SSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCSSCC-------
T ss_pred c-CCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEEEeecccceeccCcc
Confidence 9 6788777743 35688999999999999999999998 99999999999999999999999999997654332
Q ss_pred CceeccccCCCCCcchhccccCCC-CchHHHHHHHHHHHHHHcCCCCCCCCc
Q 003385 759 SHVSSIVRGTVGYLDPEYYISQQL-TDKSDVYSFGVILLELISGQEAISNEK 809 (824)
Q Consensus 759 ~~~~~~~~gt~~y~aPE~l~~~~~-~~~~DIwSlGvil~elltG~~Pf~~~~ 809 (824)
......||+.|+|||.+.+..+ +.++||||+||++|||++|+.||.+..
T Consensus 167 --~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 216 (275)
T 2eue_A 167 --FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES 216 (275)
T ss_dssp ----------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred --cccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCC
Confidence 2233468999999999987765 689999999999999999999998755
No 119
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=3.4e-33 Score=320.02 Aligned_cols=198 Identities=23% Similarity=0.355 Sum_probs=154.4
Q ss_pred HHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccC--CcccchhhhHHHHHHhhcCCCccceeeceeec-----CCeEE
Q 003385 602 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSN--SYQGKREFTNEVTLLSRIHHRNLVQFLGYCQE-----EGRSV 673 (824)
Q Consensus 602 ~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~--~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~-----~~~~~ 673 (824)
+|.+.+.||+|+||.||+|+++ +++.||||++... .....+.+.+|+++|++++||||+++++++.. ....+
T Consensus 54 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 133 (458)
T 3rp9_A 54 RYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELY 133 (458)
T ss_dssp TEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEE
T ss_pred CeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceEE
Confidence 4667899999999999999876 6889999998653 22334678899999999999999999999843 35789
Q ss_pred EEEEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCccc
Q 003385 674 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKF 753 (824)
Q Consensus 674 lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~ 753 (824)
+||||++ ++|.+++.. ...+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 134 lv~e~~~-~~L~~~~~~----~~~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGla~~ 205 (458)
T 3rp9_A 134 VVLEIAD-SDFKKLFRT----PVYLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLART 205 (458)
T ss_dssp EEECCCS-EEHHHHHHS----SCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCBC
T ss_pred EEEeccc-cchhhhccc----CCCCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeecccccchh
Confidence 9999985 688888743 45689999999999999999999998 999999999999999999999999999986
Q ss_pred ccCCCC--------------------------ceeccccCCCCCcchhcc-ccCCCCchHHHHHHHHHHHHHHc------
Q 003385 754 AVDGAS--------------------------HVSSIVRGTVGYLDPEYY-ISQQLTDKSDVYSFGVILLELIS------ 800 (824)
Q Consensus 754 ~~~~~~--------------------------~~~~~~~gt~~y~aPE~l-~~~~~~~~~DIwSlGvil~ellt------ 800 (824)
...... ......+||+.|+|||++ ....++.++|||||||++|||++
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~ 285 (458)
T 3rp9_A 206 VDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENV 285 (458)
T ss_dssp TTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTC
T ss_pred ccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhccccc
Confidence 542211 112335689999999986 45679999999999999999999
Q ss_pred -----CCCCCCC
Q 003385 801 -----GQEAISN 807 (824)
Q Consensus 801 -----G~~Pf~~ 807 (824)
|+++|.+
T Consensus 286 ~~~~~~~p~f~g 297 (458)
T 3rp9_A 286 AYHADRGPLFPG 297 (458)
T ss_dssp SSGGGCCCSCC-
T ss_pred cccccccccCCC
Confidence 6667755
No 120
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=6.9e-33 Score=295.85 Aligned_cols=199 Identities=27% Similarity=0.447 Sum_probs=172.4
Q ss_pred HHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCC--cccchhhhHHHHHHhhcCCCccceeeceeecCCeEEEEEEe
Q 003385 602 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 678 (824)
Q Consensus 602 ~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~--~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~ 678 (824)
.|.+.+.||+|+||.||+|.++ +++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 7 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 86 (284)
T 3kk8_A 7 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDL 86 (284)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEEec
Confidence 3556789999999999999876 58899999986543 22345688999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCc---EEEEecCCccccc
Q 003385 679 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMR---AKVSDFGLSKFAV 755 (824)
Q Consensus 679 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~---vkL~DFGla~~~~ 755 (824)
+++++|.+.+.. ...+++..+..++.|++.||.|||++ +|+||||||+||+++.++. +||+|||++....
T Consensus 87 ~~~~~l~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~ 159 (284)
T 3kk8_A 87 VTGGELFEDIVA----REFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN 159 (284)
T ss_dssp CCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred CCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcc
Confidence 999999888743 35688999999999999999999998 9999999999999986655 9999999997654
Q ss_pred CCCCceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCCCc
Q 003385 756 DGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEK 809 (824)
Q Consensus 756 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~~~ 809 (824)
.... .....||+.|+|||.+.+..++.++||||+||++|+|++|+.||.+..
T Consensus 160 ~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~ 211 (284)
T 3kk8_A 160 DSEA--WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED 211 (284)
T ss_dssp SSCB--CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred cCcc--ccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCc
Confidence 3322 233568999999999999999999999999999999999999997644
No 121
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=4.2e-33 Score=296.78 Aligned_cols=200 Identities=26% Similarity=0.443 Sum_probs=153.5
Q ss_pred HHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCCc---ccchhhhHHHHHHhhcCCCccceeeceeecCCeEEEEEEe
Q 003385 603 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY---QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 678 (824)
Q Consensus 603 ~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~---~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~ 678 (824)
|.+.+.||+|+||.||+|+.. +++.||||++..... ...+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 13 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 92 (278)
T 3cok_A 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEM 92 (278)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred ceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEEec
Confidence 556789999999999999874 789999999864322 1235688999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccccCCC
Q 003385 679 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 758 (824)
Q Consensus 679 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~ 758 (824)
+++++|.+++... ...+++..+..++.|++.||.|||++ +|+||||||+||+++.++.+||+|||++.......
T Consensus 93 ~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~ 166 (278)
T 3cok_A 93 CHNGEMNRYLKNR---VKPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPH 166 (278)
T ss_dssp CTTEEHHHHHHTC---SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCTTCEECC---
T ss_pred CCCCcHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeecceeeccCCC
Confidence 9999999998642 35688999999999999999999998 99999999999999999999999999987654322
Q ss_pred CceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCCCc
Q 003385 759 SHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEK 809 (824)
Q Consensus 759 ~~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~~~ 809 (824)
. ......||+.|+|||.+.+..++.++|||||||++|||++|+.||....
T Consensus 167 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 216 (278)
T 3cok_A 167 E-KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDT 216 (278)
T ss_dssp --------------------------CTHHHHHHHHHHHHHHSSCSSCCCS
T ss_pred C-cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChh
Confidence 2 2233468999999999998889999999999999999999999997644
No 122
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=7.7e-33 Score=303.81 Aligned_cols=201 Identities=22% Similarity=0.376 Sum_probs=175.2
Q ss_pred HHHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCC---cccchhhhHHHHHHhhcCCCccceeeceeecCCeEEEEE
Q 003385 601 ATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVY 676 (824)
Q Consensus 601 ~~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~---~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~ 676 (824)
.+|.+.+.||+|+||.||++++. +++.||+|++.... ....+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 41 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 120 (335)
T 2owb_A 41 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVL 120 (335)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEE
Confidence 34667889999999999999986 57889999986542 223466889999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccccC
Q 003385 677 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVD 756 (824)
Q Consensus 677 E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~~ 756 (824)
||+++++|.+++.. ...+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||+++....
T Consensus 121 e~~~~~~L~~~~~~----~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 193 (335)
T 2owb_A 121 ELCRRRSLLELHKR----RKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY 193 (335)
T ss_dssp CCCTTCBHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred ecCCCCCHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeeccCceeccc
Confidence 99999999998743 35688999999999999999999998 999999999999999999999999999986543
Q ss_pred CCCceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCCCc
Q 003385 757 GASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEK 809 (824)
Q Consensus 757 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~~~ 809 (824)
... ......||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 194 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 245 (335)
T 2owb_A 194 DGE-RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSC 245 (335)
T ss_dssp TTC-CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred Ccc-cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCC
Confidence 222 2234568999999999999999999999999999999999999998654
No 123
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=4.8e-33 Score=299.43 Aligned_cols=194 Identities=26% Similarity=0.463 Sum_probs=162.4
Q ss_pred HHHhhccccccCcEEEEEEEEcCCcEEEEEEeccCCcccchhhhHHHHHHhh--cCCCccceeeceeec----CCeEEEE
Q 003385 602 TKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSR--IHHRNLVQFLGYCQE----EGRSVLV 675 (824)
Q Consensus 602 ~~~i~~~LG~G~fg~Vy~a~~~~g~~vAVK~l~~~~~~~~~~~~~Ei~il~~--l~HpnIv~l~~~~~~----~~~~~lV 675 (824)
.|.+.+.||+|+||.||+|++ +++.||||++... ..+.+.+|.+++.. ++||||+++++++.. ....++|
T Consensus 9 ~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv 84 (301)
T 3q4u_A 9 DITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLI 84 (301)
T ss_dssp GCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEE
T ss_pred cEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEe
Confidence 456778999999999999988 5899999998643 23455667777766 789999999998644 3567899
Q ss_pred EEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHH--------hCCCCCeEecCCCCCCEEEcCCCcEEEEe
Q 003385 676 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLH--------TGCVPAIIHRDLKSSNILLDKHMRAKVSD 747 (824)
Q Consensus 676 ~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH--------~~~~~gIvHrDLkp~NILl~~~~~vkL~D 747 (824)
|||+++|+|.+++. ...+++..+..++.|++.||+||| +. +|+||||||+|||++.++.+||+|
T Consensus 85 ~e~~~~g~L~~~l~-----~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~~~kl~D 156 (301)
T 3q4u_A 85 THYHEMGSLYDYLQ-----LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNGQCCIAD 156 (301)
T ss_dssp ECCCTTCBHHHHHT-----TCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTSCEEECC
T ss_pred hhhccCCCHHHHHh-----hcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCCCEEEee
Confidence 99999999999984 346889999999999999999999 76 999999999999999999999999
Q ss_pred cCCcccccCCCCce---eccccCCCCCcchhccccC------CCCchHHHHHHHHHHHHHHcC----------CCCCCC
Q 003385 748 FGLSKFAVDGASHV---SSIVRGTVGYLDPEYYISQ------QLTDKSDVYSFGVILLELISG----------QEAISN 807 (824)
Q Consensus 748 FGla~~~~~~~~~~---~~~~~gt~~y~aPE~l~~~------~~~~~~DIwSlGvil~elltG----------~~Pf~~ 807 (824)
||+++......... .....||+.|+|||++... .++.++|||||||++|||++| +.||..
T Consensus 157 fg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~ 235 (301)
T 3q4u_A 157 LGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYD 235 (301)
T ss_dssp CTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTT
T ss_pred CCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccc
Confidence 99997655433322 2234699999999999876 445789999999999999999 888865
No 124
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=2.8e-33 Score=306.48 Aligned_cols=207 Identities=21% Similarity=0.304 Sum_probs=165.9
Q ss_pred HHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCCcc--cchhhhHHHHHHhhcCCCccceeeceeecCCeEEEEEEe
Q 003385 602 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ--GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 678 (824)
Q Consensus 602 ~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~~--~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~ 678 (824)
+|.+.+.||+|+||+||+|++. +++.||||+++..... ..+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 35 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 114 (329)
T 3gbz_A 35 RYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEY 114 (329)
T ss_dssp GEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEEEec
Confidence 5667899999999999999876 6889999999754322 245678999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEc-----CCCcEEEEecCCccc
Q 003385 679 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLD-----KHMRAKVSDFGLSKF 753 (824)
Q Consensus 679 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~-----~~~~vkL~DFGla~~ 753 (824)
++ |+|.+++.. ...+++..+..++.|++.||+|||++ +|+||||||+|||++ .++.+||+|||+++.
T Consensus 115 ~~-~~L~~~~~~----~~~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~ 186 (329)
T 3gbz_A 115 AE-NDLKKYMDK----NPDVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARA 186 (329)
T ss_dssp CS-EEHHHHHHH----CTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEECCTTHHHH
T ss_pred CC-CCHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEECcCCCccc
Confidence 98 489888843 34588999999999999999999998 999999999999994 455699999999976
Q ss_pred ccCCCCceeccccCCCCCcchhccccC-CCCchHHHHHHHHHHHHHHcCCCCCCCCccccchhcH
Q 003385 754 AVDGASHVSSIVRGTVGYLDPEYYISQ-QLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNI 817 (824)
Q Consensus 754 ~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~~DIwSlGvil~elltG~~Pf~~~~~~~~~~~i 817 (824)
...... ......||+.|+|||++.+. .++.++|||||||++|||++|+.||.+....+...++
T Consensus 187 ~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~ 250 (329)
T 3gbz_A 187 FGIPIR-QFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKI 250 (329)
T ss_dssp HC------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH
T ss_pred cCCccc-ccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHH
Confidence 543322 22334589999999999874 4899999999999999999999999876644333333
No 125
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=1.2e-32 Score=310.14 Aligned_cols=192 Identities=24% Similarity=0.328 Sum_probs=158.7
Q ss_pred hccccccCcEEEEEEEEc-CCcEEEEEEeccCCcccchhhhHHHHHHhh-cCCCccceeeceeec----CCeEEEEEEec
Q 003385 606 EKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSR-IHHRNLVQFLGYCQE----EGRSVLVYEFM 679 (824)
Q Consensus 606 ~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~~~~~~~~~Ei~il~~-l~HpnIv~l~~~~~~----~~~~~lV~E~~ 679 (824)
.+.||+|+||.||+|.++ +++.||||+++. ...+.+|++++.+ .+||||+++++++.. .+..++||||+
T Consensus 67 ~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~-----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~ 141 (400)
T 1nxk_A 67 SQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECL 141 (400)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECC
T ss_pred cceeeeccCeEEEEEEECCCCCEEEEEEeCc-----chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeC
Confidence 368999999999999876 688999999863 3457788888754 589999999998865 56789999999
Q ss_pred CCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcC---CCcEEEEecCCcccccC
Q 003385 680 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK---HMRAKVSDFGLSKFAVD 756 (824)
Q Consensus 680 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~---~~~vkL~DFGla~~~~~ 756 (824)
++|+|.+++... ....+++..+..++.||+.||.|||++ +|+||||||+|||++. ++.+||+|||+++....
T Consensus 142 ~gg~L~~~l~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~ 216 (400)
T 1nxk_A 142 DGGELFSRIQDR--GDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS 216 (400)
T ss_dssp CSEEHHHHHHCC-----CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC-
T ss_pred CCCcHHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEecccccccCC
Confidence 999999998643 234588999999999999999999998 9999999999999997 78999999999986543
Q ss_pred CCCceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCCCc
Q 003385 757 GASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEK 809 (824)
Q Consensus 757 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~~~ 809 (824)
.. .....+||+.|+|||++....++.++|||||||++|||++|+.||.+..
T Consensus 217 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~ 267 (400)
T 1nxk_A 217 HN--SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNH 267 (400)
T ss_dssp ------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCT
T ss_pred CC--ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCc
Confidence 22 2234568999999999999999999999999999999999999997644
No 126
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=6.3e-33 Score=303.08 Aligned_cols=201 Identities=26% Similarity=0.447 Sum_probs=167.9
Q ss_pred HHHhhccccccCcEEEEEEEEc-CCcE----EEEEEeccCC-cccchhhhHHHHHHhhcCCCccceeeceeecCCeEEEE
Q 003385 602 TKMLEKKIGSGGFGVVYYGKLK-DGKE----IAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLV 675 (824)
Q Consensus 602 ~~~i~~~LG~G~fg~Vy~a~~~-~g~~----vAVK~l~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV 675 (824)
.|.+.+.||+|+||.||+|++. +++. ||+|++.... ....+.+.+|+.++++++||||+++++++.+ +..++|
T Consensus 14 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v 92 (325)
T 3kex_A 14 ELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPG-SSLQLV 92 (325)
T ss_dssp TEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEECB-SSEEEE
T ss_pred HceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcC-CccEEE
Confidence 3456789999999999999875 3443 7888775432 3335678899999999999999999999864 568899
Q ss_pred EEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCccccc
Q 003385 676 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAV 755 (824)
Q Consensus 676 ~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~ 755 (824)
|||+.+|+|.+++... ...+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 93 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~ 166 (325)
T 3kex_A 93 TQYLPLGSLLDHVRQH---RGALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLP 166 (325)
T ss_dssp EECCTTCBSHHHHHSS---GGGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSCSGGGGSC
T ss_pred EEeCCCCCHHHHHHHc---cccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCCCcccccC
Confidence 9999999999998542 34678888999999999999999998 99999999999999999999999999998764
Q ss_pred CCCCc-eeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHc-CCCCCCCCc
Q 003385 756 DGASH-VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEK 809 (824)
Q Consensus 756 ~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~ellt-G~~Pf~~~~ 809 (824)
..... ......||..|+|||.+....++.++|||||||++|||++ |+.||.+..
T Consensus 167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~ 222 (325)
T 3kex_A 167 PDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLR 222 (325)
T ss_dssp CCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSC
T ss_pred cccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccC
Confidence 43322 2344557889999999999999999999999999999999 999998755
No 127
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=1.5e-32 Score=295.05 Aligned_cols=199 Identities=20% Similarity=0.342 Sum_probs=172.8
Q ss_pred HHHhhccccccCcEEEEEEEE-cCCcEEEEEEeccCCcccchhhhHHHHHHhhc-CCCccceeeceeecCCeEEEEEEec
Q 003385 602 TKMLEKKIGSGGFGVVYYGKL-KDGKEIAVKVLTSNSYQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVYEFM 679 (824)
Q Consensus 602 ~~~i~~~LG~G~fg~Vy~a~~-~~g~~vAVK~l~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~lV~E~~ 679 (824)
.|.+.+.||+|+||.||+|++ .+++.||||++.... ..+.+.+|+++++++ +|++++++++++.+....++||||+
T Consensus 11 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~ 88 (298)
T 1csn_A 11 HYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL 88 (298)
T ss_dssp TEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC
T ss_pred ceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEec
Confidence 456778999999999999987 478999999986432 346788999999999 7999999999999999999999999
Q ss_pred CCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCc-----EEEEecCCcccc
Q 003385 680 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMR-----AKVSDFGLSKFA 754 (824)
Q Consensus 680 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~-----vkL~DFGla~~~ 754 (824)
+++|.+++... ...+++..+..++.|++.||+|||++ +|+||||||+|||++.++. +||+|||+++..
T Consensus 89 -~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~ 161 (298)
T 1csn_A 89 -GPSLEDLLDLC---GRKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFY 161 (298)
T ss_dssp -CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEES
T ss_pred -CCCHHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEECcccccc
Confidence 99999998542 34589999999999999999999998 9999999999999987766 999999999865
Q ss_pred cCCCCc------eeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCCCc
Q 003385 755 VDGASH------VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEK 809 (824)
Q Consensus 755 ~~~~~~------~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~~~ 809 (824)
...... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||.+..
T Consensus 162 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 222 (298)
T 1csn_A 162 RDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLK 222 (298)
T ss_dssp BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCC
T ss_pred ccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhh
Confidence 543221 2344569999999999999999999999999999999999999998743
No 128
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=4.5e-33 Score=296.90 Aligned_cols=198 Identities=27% Similarity=0.472 Sum_probs=169.7
Q ss_pred HHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCC---cccchhhhHHHHHHhhcCCCccceeeceeecCCeEEEEEEe
Q 003385 603 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 678 (824)
Q Consensus 603 ~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~---~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~ 678 (824)
|.+.+.||+|+||.||+|++. +++.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 11 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 90 (279)
T 3fdn_A 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEY 90 (279)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred EEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEEEec
Confidence 556789999999999999876 56789999986432 12245688999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccccCCC
Q 003385 679 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 758 (824)
Q Consensus 679 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~ 758 (824)
+++++|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 91 ~~~~~l~~~l~~----~~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~- 162 (279)
T 3fdn_A 91 APLGTVYRELQK----LSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS- 162 (279)
T ss_dssp CTTEEHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSCCEESCC----
T ss_pred CCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEeccccccCCcc-
Confidence 999999998843 35588999999999999999999998 9999999999999999999999999988544322
Q ss_pred CceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCCCcc
Q 003385 759 SHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKF 810 (824)
Q Consensus 759 ~~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~~~~ 810 (824)
......||+.|+|||.+.+..++.++||||+||++|||++|+.||.....
T Consensus 163 --~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~ 212 (279)
T 3fdn_A 163 --RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 212 (279)
T ss_dssp -------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSH
T ss_pred --cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcH
Confidence 22334689999999999999999999999999999999999999987553
No 129
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=4.1e-33 Score=301.71 Aligned_cols=206 Identities=29% Similarity=0.461 Sum_probs=175.7
Q ss_pred HHHHhhccccccCcEEEEEEEE------cCCcEEEEEEeccCCc-ccchhhhHHHHHHhhc-CCCccceeeceeecCCeE
Q 003385 601 ATKMLEKKIGSGGFGVVYYGKL------KDGKEIAVKVLTSNSY-QGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRS 672 (824)
Q Consensus 601 ~~~~i~~~LG~G~fg~Vy~a~~------~~g~~vAVK~l~~~~~-~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~ 672 (824)
..|.+.+.||+|+||.||+|++ .+++.||||+++.... ...+.+.+|+++++++ +||||+++++++.+.+..
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~ 102 (313)
T 1t46_A 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPT 102 (313)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred hhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCc
Confidence 4566789999999999999986 2467899999975432 3356788999999999 999999999999999999
Q ss_pred EEEEEecCCCCHHHHhhcccC--------------ccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEc
Q 003385 673 VLVYEFMHNGTLKEHLYGTLT--------------HEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLD 738 (824)
Q Consensus 673 ~lV~E~~~~gsL~~~L~~~~~--------------~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~ 738 (824)
++||||+++|+|.+++..... ....+++..++.++.|++.||.|||++ +|+||||||+||+++
T Consensus 103 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~ 179 (313)
T 1t46_A 103 LVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLT 179 (313)
T ss_dssp EEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEE
T ss_pred EEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEc
Confidence 999999999999999864321 123588999999999999999999998 999999999999999
Q ss_pred CCCcEEEEecCCcccccCCCCc-eeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHc-CCCCCCCCc
Q 003385 739 KHMRAKVSDFGLSKFAVDGASH-VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEK 809 (824)
Q Consensus 739 ~~~~vkL~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~ellt-G~~Pf~~~~ 809 (824)
.++.+||+|||+++........ ......+|+.|+|||.+.+..++.++|||||||++|||++ |+.||.+..
T Consensus 180 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~ 252 (313)
T 1t46_A 180 HGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMP 252 (313)
T ss_dssp TTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC
T ss_pred CCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCccc
Confidence 9999999999999866543322 2233457889999999999999999999999999999999 999997754
No 130
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=5.6e-33 Score=314.75 Aligned_cols=207 Identities=28% Similarity=0.372 Sum_probs=168.5
Q ss_pred HHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCCcccchhhhHHHHHHhhcCCCccceeeceeec------CCeEEEE
Q 003385 603 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQE------EGRSVLV 675 (824)
Q Consensus 603 ~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~------~~~~~lV 675 (824)
|.+.+.||+|+||.||+|++. +++.||||++... .+...+|++++++++||||+++++++.. ....++|
T Consensus 56 y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~----~~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv 131 (420)
T 1j1b_A 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD----KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLV 131 (420)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC----TTSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEE
T ss_pred EEeeeEEeeCCCEEEEEEEECCCCcEEEEEEeccc----chhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEee
Confidence 556789999999999999986 5899999998643 3345689999999999999999998843 2236799
Q ss_pred EEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCC-CcEEEEecCCcccc
Q 003385 676 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKH-MRAKVSDFGLSKFA 754 (824)
Q Consensus 676 ~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~-~~vkL~DFGla~~~ 754 (824)
|||+++ ++.+.+.........+++..+..++.||+.||.|||++ +|+||||||+|||++.+ +.+||+|||+++..
T Consensus 132 ~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~ 207 (420)
T 1j1b_A 132 LDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 207 (420)
T ss_dssp EECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred hhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccchhhhhc
Confidence 999985 66666543333456789999999999999999999998 99999999999999965 67899999999865
Q ss_pred cCCCCceeccccCCCCCcchhccccC-CCCchHHHHHHHHHHHHHHcCCCCCCCCccccchhcHhh
Q 003385 755 VDGASHVSSIVRGTVGYLDPEYYISQ-QLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQ 819 (824)
Q Consensus 755 ~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~~DIwSlGvil~elltG~~Pf~~~~~~~~~~~iv~ 819 (824)
..... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||.+....+...++++
T Consensus 208 ~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~ 271 (420)
T 1j1b_A 208 VRGEP--NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 271 (420)
T ss_dssp CTTCC--CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred ccCCC--ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 43322 2334689999999998764 789999999999999999999999988764444444443
No 131
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=7.2e-33 Score=305.99 Aligned_cols=198 Identities=28% Similarity=0.470 Sum_probs=170.0
Q ss_pred HHHHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCCcc---cchhhhHHHHHHhhcCCCccceeeceeecCCeEEEE
Q 003385 600 DATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ---GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLV 675 (824)
Q Consensus 600 ~~~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~~---~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV 675 (824)
...|.+.+.||+|+||.||+|+.. +++.||||++...... ..+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 132 (348)
T 1u5q_A 53 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV 132 (348)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEE
Confidence 345667789999999999999874 7889999999754322 235688999999999999999999999999999999
Q ss_pred EEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCccccc
Q 003385 676 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAV 755 (824)
Q Consensus 676 ~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~ 755 (824)
|||+. |+|.+.+.. ....+++..+..++.|+++||.|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 133 ~e~~~-g~l~~~l~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~ 205 (348)
T 1u5q_A 133 MEYCL-GSASDLLEV---HKKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMA 205 (348)
T ss_dssp EECCS-EEHHHHHHH---HTSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSS
T ss_pred EecCC-CCHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccCceecC
Confidence 99997 678777743 235688999999999999999999998 99999999999999999999999999997653
Q ss_pred CCCCceeccccCCCCCcchhccc---cCCCCchHHHHHHHHHHHHHHcCCCCCCCCc
Q 003385 756 DGASHVSSIVRGTVGYLDPEYYI---SQQLTDKSDVYSFGVILLELISGQEAISNEK 809 (824)
Q Consensus 756 ~~~~~~~~~~~gt~~y~aPE~l~---~~~~~~~~DIwSlGvil~elltG~~Pf~~~~ 809 (824)
.. ....||+.|+|||++. ...++.++|||||||++|||++|+.||.+..
T Consensus 206 ~~-----~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~ 257 (348)
T 1u5q_A 206 PA-----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN 257 (348)
T ss_dssp SB-----CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred CC-----CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 32 2346899999999985 5678999999999999999999999997643
No 132
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=5.5e-33 Score=301.33 Aligned_cols=201 Identities=20% Similarity=0.349 Sum_probs=164.4
Q ss_pred HHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCCcc---cchhhhHHHHHHhhcCCCccceeeceeecCCeEEEEEE
Q 003385 602 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ---GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYE 677 (824)
Q Consensus 602 ~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~~---~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E 677 (824)
.|.+.+.||+|+||.||+|++. +++.||+|++...... ..+.+.+|++++++++||||+++++++...+..++|||
T Consensus 35 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 114 (309)
T 2h34_A 35 PYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVDMR 114 (309)
T ss_dssp CEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEEEE
Confidence 4667899999999999999976 6889999999754322 23668899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccccCC
Q 003385 678 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 757 (824)
Q Consensus 678 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~~~ 757 (824)
|+++++|.+++.. ...+++..+..++.|++.||.|||++ +|+||||||+||+++.++.+||+|||++......
T Consensus 115 ~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 187 (309)
T 2h34_A 115 LINGVDLAAMLRR----QGPLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGIASATTDE 187 (309)
T ss_dssp CCCCEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCCC-------
T ss_pred ecCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCccCcccccc
Confidence 9999999999853 34688999999999999999999998 9999999999999999999999999998765443
Q ss_pred CCceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCCCc
Q 003385 758 ASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEK 809 (824)
Q Consensus 758 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~~~ 809 (824)
.........|++.|+|||.+.+..++.++|||||||++|||++|+.||.+..
T Consensus 188 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 239 (309)
T 2h34_A 188 KLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQ 239 (309)
T ss_dssp ---------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCH
T ss_pred ccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCch
Confidence 3333334568999999999999999999999999999999999999997644
No 133
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=5.3e-33 Score=304.02 Aligned_cols=202 Identities=26% Similarity=0.442 Sum_probs=165.3
Q ss_pred HHHHhhccccccCcEEEEEEEEc-CCc----EEEEEEeccCC-cccchhhhHHHHHHhhcCCCccceeeceeecCCeEEE
Q 003385 601 ATKMLEKKIGSGGFGVVYYGKLK-DGK----EIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVL 674 (824)
Q Consensus 601 ~~~~i~~~LG~G~fg~Vy~a~~~-~g~----~vAVK~l~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~l 674 (824)
..|.+.+.||+|+||.||+|++. +++ +||+|.++... ....+.+.+|++++++++||||+++++++.+.. .++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~ 93 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL 93 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEE
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEE
Confidence 34567789999999999999875 344 35888876432 234567899999999999999999999998765 689
Q ss_pred EEEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccc
Q 003385 675 VYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFA 754 (824)
Q Consensus 675 V~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~ 754 (824)
|+||+.+|+|.+++... ...+++..++.++.|++.||.|||++ +|+||||||+|||++.++.+||+|||+++..
T Consensus 94 v~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~ 167 (327)
T 3poz_A 94 ITQLMPFGCLLDYVREH---KDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL 167 (327)
T ss_dssp EEECCTTCBHHHHHHHS---TTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTHHHHH
T ss_pred EEEecCCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccCcceeEc
Confidence 99999999999998643 35688999999999999999999998 9999999999999999999999999999865
Q ss_pred cCCCCc-eeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHc-CCCCCCCCc
Q 003385 755 VDGASH-VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEK 809 (824)
Q Consensus 755 ~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~ellt-G~~Pf~~~~ 809 (824)
...... ......+|+.|+|||.+.+..++.++|||||||++|||++ |+.||.+..
T Consensus 168 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~ 224 (327)
T 3poz_A 168 GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 224 (327)
T ss_dssp TTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC
T ss_pred cCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCC
Confidence 443222 2233446889999999999999999999999999999999 999998754
No 134
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=1.1e-32 Score=319.08 Aligned_cols=200 Identities=29% Similarity=0.471 Sum_probs=169.4
Q ss_pred HHHHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCC--cccchhhhHHHHHHhhcCCCccceeeceeecCCeEEEEE
Q 003385 600 DATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVY 676 (824)
Q Consensus 600 ~~~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~--~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~ 676 (824)
...|.+.+.||+|+||+||+|+++ +++.||+|+++... ......+.+|++++++++||||+++++++.+.+..++||
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 115 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVM 115 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 456778899999999999999986 68899999997543 233567889999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCC---CcEEEEecCCccc
Q 003385 677 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKH---MRAKVSDFGLSKF 753 (824)
Q Consensus 677 E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~---~~vkL~DFGla~~ 753 (824)
||+++|+|.+.+.. ...+++..+..++.||+.||.|||++ +|+||||||+|||++.. +.+||+|||+++.
T Consensus 116 e~~~~g~L~~~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~ 188 (494)
T 3lij_A 116 ECYKGGELFDEIIH----RMKFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAV 188 (494)
T ss_dssp ECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCEE
T ss_pred ecCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEECCCCeE
Confidence 99999999988843 35688999999999999999999998 99999999999999764 5599999999986
Q ss_pred ccCCCCceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCCCc
Q 003385 754 AVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEK 809 (824)
Q Consensus 754 ~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~~~ 809 (824)
..... .....+||+.|+|||++. ..++.++||||+||++|+|++|+.||.+..
T Consensus 189 ~~~~~--~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~ 241 (494)
T 3lij_A 189 FENQK--KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQT 241 (494)
T ss_dssp CBTTB--CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred CCCCc--cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCC
Confidence 64432 233456999999999875 579999999999999999999999998754
No 135
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=2e-33 Score=304.81 Aligned_cols=204 Identities=35% Similarity=0.614 Sum_probs=167.5
Q ss_pred HHHHHHHHhhccccccCcEEEEEEEEcCCcEEEEEEeccCC--cccchhhhHHHHHHhhcCCCccceeeceeecCCeEEE
Q 003385 597 DIEDATKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVL 674 (824)
Q Consensus 597 ~~~~~~~~i~~~LG~G~fg~Vy~a~~~~g~~vAVK~l~~~~--~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~l 674 (824)
++....+.+.+.||+|+||.||+|+++ ..+|+|+++... ....+.+.+|++++++++||||+++++++.. +..++
T Consensus 32 ~i~~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~l 108 (307)
T 3lb7_A 32 EIEASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAI 108 (307)
T ss_dssp BCCTTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEE
T ss_pred EecccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc-CcEEE
Confidence 344456678899999999999999865 468999887543 2234678899999999999999999998764 45789
Q ss_pred EEEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccc
Q 003385 675 VYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFA 754 (824)
Q Consensus 675 V~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~ 754 (824)
||||+++++|.+++.. ....+++..++.++.|++.||+|||++ +|+||||||+|||+++++.+||+|||+++..
T Consensus 109 v~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~ 182 (307)
T 3lb7_A 109 VTQWCEGSSLYKHLHV---QETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVK 182 (307)
T ss_dssp EEECCSSCBHHHHHHT---SCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEECCCCSSCC-
T ss_pred EEecCCCCcHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEEccCCCceec
Confidence 9999999999999853 245688999999999999999999998 9999999999999999999999999999754
Q ss_pred cCC-CCceeccccCCCCCcchhccc---cCCCCchHHHHHHHHHHHHHHcCCCCCCCCc
Q 003385 755 VDG-ASHVSSIVRGTVGYLDPEYYI---SQQLTDKSDVYSFGVILLELISGQEAISNEK 809 (824)
Q Consensus 755 ~~~-~~~~~~~~~gt~~y~aPE~l~---~~~~~~~~DIwSlGvil~elltG~~Pf~~~~ 809 (824)
... .........||+.|+|||++. ...++.++|||||||++|||++|+.||.+..
T Consensus 183 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~ 241 (307)
T 3lb7_A 183 SRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHIN 241 (307)
T ss_dssp -----------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred ccccccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCC
Confidence 321 122233456999999999986 5678889999999999999999999997643
No 136
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=9.6e-33 Score=312.75 Aligned_cols=200 Identities=26% Similarity=0.452 Sum_probs=161.8
Q ss_pred HHHHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCCc--------ccchhhhHHHHHHhhcCCCccceeeceeecCC
Q 003385 600 DATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY--------QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEG 670 (824)
Q Consensus 600 ~~~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~--------~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~ 670 (824)
...|.+.+.||+|+||.||+|.++ +++.||||++..... .....+.+|++++++++||||+++++++.. +
T Consensus 134 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~-~ 212 (419)
T 3i6u_A 134 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA-E 212 (419)
T ss_dssp HTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES-S
T ss_pred hccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec-C
Confidence 445778899999999999999876 578999999865321 123458899999999999999999999854 5
Q ss_pred eEEEEEEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCC---CcEEEEe
Q 003385 671 RSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKH---MRAKVSD 747 (824)
Q Consensus 671 ~~~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~---~~vkL~D 747 (824)
..++||||+++|+|.+++. ....+++..+..++.|++.||+|||++ +|+||||||+|||++.+ ..+||+|
T Consensus 213 ~~~lv~e~~~~g~L~~~l~----~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kl~D 285 (419)
T 3i6u_A 213 DYYIVLELMEGGELFDKVV----GNKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITD 285 (419)
T ss_dssp EEEEEEECCTTCBGGGGTS----SSCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSCCEEECC
T ss_pred ceEEEEEcCCCCcHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcceEEEee
Confidence 5799999999999988774 345689999999999999999999998 99999999999999754 4599999
Q ss_pred cCCcccccCCCCceeccccCCCCCcchhcccc---CCCCchHHHHHHHHHHHHHHcCCCCCCCCc
Q 003385 748 FGLSKFAVDGASHVSSIVRGTVGYLDPEYYIS---QQLTDKSDVYSFGVILLELISGQEAISNEK 809 (824)
Q Consensus 748 FGla~~~~~~~~~~~~~~~gt~~y~aPE~l~~---~~~~~~~DIwSlGvil~elltG~~Pf~~~~ 809 (824)
||+++..... ......+||+.|+|||++.. ..++.++|||||||++|||++|+.||.+..
T Consensus 286 FG~a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~ 348 (419)
T 3i6u_A 286 FGHSKILGET--SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 348 (419)
T ss_dssp SSTTTSCC-------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCS
T ss_pred cccceecCCC--ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCc
Confidence 9999865432 22344579999999999863 677889999999999999999999997643
No 137
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=8.9e-33 Score=319.00 Aligned_cols=200 Identities=31% Similarity=0.448 Sum_probs=172.2
Q ss_pred HHHHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCC--cccchhhhHHHHHHhhcCCCccceeeceeecCCeEEEEE
Q 003385 600 DATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVY 676 (824)
Q Consensus 600 ~~~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~--~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~ 676 (824)
..+|.+.+.||+|+||+||+|+++ +++.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 100 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG 100 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEE
Confidence 456778899999999999999986 78999999986432 233567889999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEc---CCCcEEEEecCCccc
Q 003385 677 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLD---KHMRAKVSDFGLSKF 753 (824)
Q Consensus 677 E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~---~~~~vkL~DFGla~~ 753 (824)
||+.+|+|.+.+.. ...+++..+..++.|++.||.|||++ +|+||||||+|||++ .++.+||+|||+++.
T Consensus 101 e~~~~~~L~~~~~~----~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 173 (486)
T 3mwu_A 101 ELYTGGELFDEIIK----RKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTC 173 (486)
T ss_dssp CCCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECSCSCTTT
T ss_pred EcCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEECCcCeE
Confidence 99999999988843 35688999999999999999999998 999999999999995 456799999999976
Q ss_pred ccCCCCceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCCCc
Q 003385 754 AVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEK 809 (824)
Q Consensus 754 ~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~~~ 809 (824)
..... ......||+.|+|||++.+ .++.++||||+||++|+|++|+.||.+..
T Consensus 174 ~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~ 226 (486)
T 3mwu_A 174 FQQNT--KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKN 226 (486)
T ss_dssp BCCC------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred CCCCC--ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 54332 2334569999999998865 58999999999999999999999997654
No 138
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=6.8e-33 Score=319.74 Aligned_cols=201 Identities=31% Similarity=0.483 Sum_probs=175.0
Q ss_pred HHHHHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCC---cccchhhhHHHHHHhhcCCCccceeeceeecCCeEEE
Q 003385 599 EDATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVL 674 (824)
Q Consensus 599 ~~~~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~---~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~l 674 (824)
...+|.+.+.||+|+||.||+|+++ +++.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++
T Consensus 24 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 103 (484)
T 3nyv_A 24 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYL 103 (484)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 3457788899999999999999986 78999999996543 2235668899999999999999999999999999999
Q ss_pred EEEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEE---cCCCcEEEEecCCc
Q 003385 675 VYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILL---DKHMRAKVSDFGLS 751 (824)
Q Consensus 675 V~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl---~~~~~vkL~DFGla 751 (824)
||||+.+|+|.+.+.. ...+++..+..++.|++.||.|||++ +|+||||||+|||+ +.++.+||+|||++
T Consensus 104 v~e~~~~~~L~~~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a 176 (484)
T 3nyv_A 104 VGEVYTGGELFDEIIS----RKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS 176 (484)
T ss_dssp EECCCCSCBHHHHHHT----CSCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCTTHH
T ss_pred EEecCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEeeeee
Confidence 9999999999998853 35688999999999999999999998 99999999999999 46789999999999
Q ss_pred ccccCCCCceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCCCc
Q 003385 752 KFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEK 809 (824)
Q Consensus 752 ~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~~~ 809 (824)
+...... ......||+.|+|||++.+ .++.++||||+||++|+|++|+.||.+..
T Consensus 177 ~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~ 231 (484)
T 3nyv_A 177 THFEASK--KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGAN 231 (484)
T ss_dssp HHBCCCC--SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred EEccccc--ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCC
Confidence 7654432 2234569999999998865 69999999999999999999999998754
No 139
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=1.3e-32 Score=312.96 Aligned_cols=196 Identities=24% Similarity=0.365 Sum_probs=162.6
Q ss_pred HHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccC--CcccchhhhHHHHHHhhcCCCccceeeceeecC-----CeEE
Q 003385 602 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSN--SYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEE-----GRSV 673 (824)
Q Consensus 602 ~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~--~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~-----~~~~ 673 (824)
.|.+.+.||+|+||.||+|+++ +++.||||+++.. .....+.+.+|++++++++||||+++++++... +..+
T Consensus 27 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~ 106 (432)
T 3n9x_A 27 NYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELY 106 (432)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEE
T ss_pred CEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeEE
Confidence 4667899999999999999876 5788999999753 223346788999999999999999999998765 5789
Q ss_pred EEEEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCccc
Q 003385 674 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKF 753 (824)
Q Consensus 674 lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~ 753 (824)
+||||++ ++|.+++.. ...+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 107 lv~e~~~-~~L~~~~~~----~~~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFGla~~ 178 (432)
T 3n9x_A 107 IVLEIAD-SDLKKLFKT----PIFLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLART 178 (432)
T ss_dssp EEEECCS-EEHHHHHHS----SCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEecCC-cCHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCCCccc
Confidence 9999987 599988843 35689999999999999999999998 999999999999999999999999999986
Q ss_pred ccCCCC---------------------ceeccccCCCCCcchhcc-ccCCCCchHHHHHHHHHHHHHHcCCCCC
Q 003385 754 AVDGAS---------------------HVSSIVRGTVGYLDPEYY-ISQQLTDKSDVYSFGVILLELISGQEAI 805 (824)
Q Consensus 754 ~~~~~~---------------------~~~~~~~gt~~y~aPE~l-~~~~~~~~~DIwSlGvil~elltG~~Pf 805 (824)
...... ......+||+.|+|||++ ....++.++||||+||++|||++|..||
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~ 252 (432)
T 3n9x_A 179 INSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSH 252 (432)
T ss_dssp C-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTT
T ss_pred ccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccccc
Confidence 543221 112445799999999986 4567999999999999999999855444
No 140
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.7e-33 Score=309.02 Aligned_cols=204 Identities=25% Similarity=0.364 Sum_probs=166.4
Q ss_pred HHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCC--cccchhhhHHHHHHhhcCCCccceeeceeecC------CeE
Q 003385 602 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEE------GRS 672 (824)
Q Consensus 602 ~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~--~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~------~~~ 672 (824)
.|.+.+.||+|+||.||+|.+. +|+.||||++.... ....+.+.+|++++++++||||+++++++... ...
T Consensus 26 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~ 105 (367)
T 1cm8_A 26 VYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDF 105 (367)
T ss_dssp SEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCC
T ss_pred eEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCceE
Confidence 3566789999999999999875 68999999986432 22345688999999999999999999998765 345
Q ss_pred EEEEEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcc
Q 003385 673 VLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSK 752 (824)
Q Consensus 673 ~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~ 752 (824)
++||||+ +++|.+++.. ..+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||+++
T Consensus 106 ~lv~e~~-~~~L~~~~~~-----~~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 176 (367)
T 1cm8_A 106 YLVMPFM-GTDLGKLMKH-----EKLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLAR 176 (367)
T ss_dssp EEEEECC-SEEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred EEEEecC-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeeeccc
Confidence 9999999 7899998843 4588899999999999999999998 99999999999999999999999999998
Q ss_pred cccCCCCceeccccCCCCCcchhcccc-CCCCchHHHHHHHHHHHHHHcCCCCCCCCccccchhcHh
Q 003385 753 FAVDGASHVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIV 818 (824)
Q Consensus 753 ~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~~DIwSlGvil~elltG~~Pf~~~~~~~~~~~iv 818 (824)
..... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+....+....|+
T Consensus 177 ~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~ 239 (367)
T 1cm8_A 177 QADSE----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIM 239 (367)
T ss_dssp ECCSS----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred ccccc----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 65332 233468999999999887 689999999999999999999999998866444444443
No 141
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=1.2e-32 Score=298.26 Aligned_cols=203 Identities=24% Similarity=0.394 Sum_probs=164.1
Q ss_pred HHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCC---cccchhhhHHHHHHhhcCCCccceeeceeecCCeEEEEEE
Q 003385 602 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYE 677 (824)
Q Consensus 602 ~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~---~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E 677 (824)
.|.+.+.||+|+||.||+|... +++.||||+++... ....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 33 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 112 (310)
T 2wqm_A 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLE 112 (310)
T ss_dssp GEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEEe
Confidence 4677899999999999999875 78999999997532 2234568899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccccCC
Q 003385 678 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 757 (824)
Q Consensus 678 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~~~ 757 (824)
|+++++|.+++.........+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 113 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~ 189 (310)
T 2wqm_A 113 LADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSK 189 (310)
T ss_dssp CCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC---------
T ss_pred cCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEeccceeeecCC
Confidence 9999999999865433456688999999999999999999998 9999999999999999999999999998765432
Q ss_pred CCceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCCC
Q 003385 758 ASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNE 808 (824)
Q Consensus 758 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~~ 808 (824)
.. ......|++.|+|||.+....++.++|||||||++|||++|+.||.+.
T Consensus 190 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~ 239 (310)
T 2wqm_A 190 TT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGD 239 (310)
T ss_dssp ----------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC--
T ss_pred Cc-cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCccc
Confidence 22 223345899999999999999999999999999999999999999754
No 142
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=7.4e-33 Score=304.97 Aligned_cols=197 Identities=25% Similarity=0.373 Sum_probs=164.3
Q ss_pred HHHhhccccccCcEEEEEEEEcCCcEEEEEEeccCCc--ccchhhhHHHHHHhhcCC--CccceeeceeecCCeEEEEEE
Q 003385 602 TKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSY--QGKREFTNEVTLLSRIHH--RNLVQFLGYCQEEGRSVLVYE 677 (824)
Q Consensus 602 ~~~i~~~LG~G~fg~Vy~a~~~~g~~vAVK~l~~~~~--~~~~~~~~Ei~il~~l~H--pnIv~l~~~~~~~~~~~lV~E 677 (824)
.|.+.+.||+|+||.||+|...+++.||||++..... ...+.+.+|++++++++| |||+++++++.+.+..++|||
T Consensus 10 ~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e 89 (343)
T 3dbq_A 10 IYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME 89 (343)
T ss_dssp EEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC
T ss_pred EEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEEe
Confidence 3567789999999999999988899999999875432 234678899999999986 999999999999999999999
Q ss_pred ecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccccCC
Q 003385 678 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 757 (824)
Q Consensus 678 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~~~ 757 (824)
+.+++|.+++.. ...+++..+..++.|++.||.|||++ +|+||||||+|||++ ++.+||+|||+++.....
T Consensus 90 -~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~ 160 (343)
T 3dbq_A 90 -CGNIDLNSWLKK----KKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPD 160 (343)
T ss_dssp -CCSEEHHHHHHH----SCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC---
T ss_pred -CCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeecccccccCcc
Confidence 567899999853 35688999999999999999999998 999999999999997 678999999999865443
Q ss_pred CCc-eeccccCCCCCcchhcccc-----------CCCCchHHHHHHHHHHHHHHcCCCCCCC
Q 003385 758 ASH-VSSIVRGTVGYLDPEYYIS-----------QQLTDKSDVYSFGVILLELISGQEAISN 807 (824)
Q Consensus 758 ~~~-~~~~~~gt~~y~aPE~l~~-----------~~~~~~~DIwSlGvil~elltG~~Pf~~ 807 (824)
... ......||+.|+|||++.. ..++.++|||||||++|||++|+.||.+
T Consensus 161 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 222 (343)
T 3dbq_A 161 TTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ 222 (343)
T ss_dssp ---------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred cccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchh
Confidence 222 2334569999999999865 6788999999999999999999999975
No 143
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=3e-33 Score=297.85 Aligned_cols=204 Identities=26% Similarity=0.380 Sum_probs=171.6
Q ss_pred HHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCC--cccchhhhHHHHHHhhcCCCccceeeceee--cCCeEEEEE
Q 003385 602 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQ--EEGRSVLVY 676 (824)
Q Consensus 602 ~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~--~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~--~~~~~~lV~ 676 (824)
.|.+.+.||+|+||.||+|+.+ +++.||+|++.... ....+.+.+|++++++++||||+++++++. ..+..++||
T Consensus 7 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~ 86 (279)
T 2w5a_A 7 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVM 86 (279)
T ss_dssp GEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEEE
T ss_pred heeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEEE
Confidence 3456789999999999999886 68899999997543 233466889999999999999999999874 467899999
Q ss_pred EecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCC-----eEecCCCCCCEEEcCCCcEEEEecCCc
Q 003385 677 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPA-----IIHRDLKSSNILLDKHMRAKVSDFGLS 751 (824)
Q Consensus 677 E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~g-----IvHrDLkp~NILl~~~~~vkL~DFGla 751 (824)
||+++++|.+++.........+++..++.++.|++.||+|||+. + |+||||||+||+++.++.+||+|||++
T Consensus 87 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~ 163 (279)
T 2w5a_A 87 EYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA 163 (279)
T ss_dssp ECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECSSSCEEECCCCHH
T ss_pred eCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcCCCCEEEecCchh
Confidence 99999999999865433445689999999999999999999997 7 999999999999999999999999998
Q ss_pred ccccCCCCceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCCCc
Q 003385 752 KFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEK 809 (824)
Q Consensus 752 ~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~~~ 809 (824)
+....... ......|++.|+|||.+.+..++.++|||||||++|||++|+.||....
T Consensus 164 ~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 220 (279)
T 2w5a_A 164 RILNHDTS-FAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFS 220 (279)
T ss_dssp HHC---CH-HHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred eeeccccc-cccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccC
Confidence 76543222 2233458999999999999899999999999999999999999998654
No 144
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=8.6e-33 Score=303.06 Aligned_cols=208 Identities=27% Similarity=0.490 Sum_probs=174.6
Q ss_pred HHHHHHhhccccccCcEEEEEEEEc--------CCcEEEEEEeccCCc-ccchhhhHHHHHHhhc-CCCccceeeceeec
Q 003385 599 EDATKMLEKKIGSGGFGVVYYGKLK--------DGKEIAVKVLTSNSY-QGKREFTNEVTLLSRI-HHRNLVQFLGYCQE 668 (824)
Q Consensus 599 ~~~~~~i~~~LG~G~fg~Vy~a~~~--------~g~~vAVK~l~~~~~-~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~ 668 (824)
....|.+.+.||+|+||.||+|++. +++.||||+++.... ...+.+.+|+++++++ +||||+++++++.+
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 112 (334)
T 2pvf_A 33 PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 112 (334)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred CHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEcc
Confidence 3456678899999999999999873 467899999975432 2346688999999999 89999999999999
Q ss_pred CCeEEEEEEecCCCCHHHHhhcccC------------ccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEE
Q 003385 669 EGRSVLVYEFMHNGTLKEHLYGTLT------------HEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNIL 736 (824)
Q Consensus 669 ~~~~~lV~E~~~~gsL~~~L~~~~~------------~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NIL 736 (824)
.+..++||||+++|+|.+++..... ....+++..++.++.|++.||.|||++ +|+||||||+||+
T Consensus 113 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIl 189 (334)
T 2pvf_A 113 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVL 189 (334)
T ss_dssp SSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEE
T ss_pred CCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCccceEE
Confidence 9999999999999999999965422 123588999999999999999999998 9999999999999
Q ss_pred EcCCCcEEEEecCCcccccCCCCc-eeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHc-CCCCCCCCc
Q 003385 737 LDKHMRAKVSDFGLSKFAVDGASH-VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEK 809 (824)
Q Consensus 737 l~~~~~vkL~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~ellt-G~~Pf~~~~ 809 (824)
++.++.+||+|||+++........ ......+|+.|+|||++.+..++.++|||||||++|||++ |+.||.+..
T Consensus 190 l~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~ 264 (334)
T 2pvf_A 190 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP 264 (334)
T ss_dssp ECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred EcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCC
Confidence 999999999999999865443221 1223447789999999999899999999999999999999 999998654
No 145
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=2.3e-33 Score=327.62 Aligned_cols=202 Identities=29% Similarity=0.506 Sum_probs=173.7
Q ss_pred HHHHhhccccccCcEEEEEEEEcCCcEEEEEEeccCCcccchhhhHHHHHHhhcCCCccceeeceeecCCeEEEEEEecC
Q 003385 601 ATKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 680 (824)
Q Consensus 601 ~~~~i~~~LG~G~fg~Vy~a~~~~g~~vAVK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~~ 680 (824)
..+.+.++||+|+||.||+|++++++.||||+++... ...+.+.+|+++|++++||||+++++++.+ +..++||||++
T Consensus 267 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~~ 344 (535)
T 2h8h_A 267 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMS 344 (535)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCT
T ss_pred hhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehhc
Confidence 3456788999999999999999988899999997544 235679999999999999999999999876 66899999999
Q ss_pred CCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccccCCCCc
Q 003385 681 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 760 (824)
Q Consensus 681 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~~~ 760 (824)
+|+|.+++... ....+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++........
T Consensus 345 ~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~ 419 (535)
T 2h8h_A 345 KGSLLDFLKGE--TGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 419 (535)
T ss_dssp TEEHHHHHSHH--HHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHH
T ss_pred CCcHHHHHhhc--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccccceecCCCcee
Confidence 99999999532 234588899999999999999999998 9999999999999999999999999999765432111
Q ss_pred eeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHc-CCCCCCCCc
Q 003385 761 VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEK 809 (824)
Q Consensus 761 ~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~ellt-G~~Pf~~~~ 809 (824)
......++..|+|||.+....++.++|||||||++|||++ |+.||.+..
T Consensus 420 ~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~ 469 (535)
T 2h8h_A 420 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV 469 (535)
T ss_dssp TTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCC
T ss_pred cccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC
Confidence 2223346789999999999999999999999999999999 999997644
No 146
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=1e-32 Score=302.02 Aligned_cols=207 Identities=24% Similarity=0.388 Sum_probs=170.6
Q ss_pred HHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCCcc--cchhhhHHHHHHhhcCCCccceeeceeecCCeEEEEEEe
Q 003385 602 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ--GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 678 (824)
Q Consensus 602 ~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~~--~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~ 678 (824)
.|.+.+.||+|+||.||+|++. +++.||||++...... ..+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 26 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 105 (331)
T 4aaa_A 26 KYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEF 105 (331)
T ss_dssp GEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEec
Confidence 4566789999999999999986 5889999998654322 245578899999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccccCCC
Q 003385 679 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 758 (824)
Q Consensus 679 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~ 758 (824)
+++++|.+++. ....+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 106 ~~~~~l~~~~~----~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 178 (331)
T 4aaa_A 106 VDHTILDDLEL----FPNGLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG 178 (331)
T ss_dssp CSEEHHHHHHH----STTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTTC-------
T ss_pred CCcchHHHHHh----hccCCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCCceeecCCc
Confidence 99998888763 234588999999999999999999998 99999999999999999999999999997654332
Q ss_pred CceeccccCCCCCcchhccccC-CCCchHHHHHHHHHHHHHHcCCCCCCCCccccchhc
Q 003385 759 SHVSSIVRGTVGYLDPEYYISQ-QLTDKSDVYSFGVILLELISGQEAISNEKFGANCRN 816 (824)
Q Consensus 759 ~~~~~~~~gt~~y~aPE~l~~~-~~~~~~DIwSlGvil~elltG~~Pf~~~~~~~~~~~ 816 (824)
. ......||+.|+|||.+.+. .++.++||||+||++|||++|+.||.+....+...+
T Consensus 179 ~-~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~ 236 (331)
T 4aaa_A 179 E-VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYH 236 (331)
T ss_dssp ------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH
T ss_pred c-ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHH
Confidence 2 22345689999999998875 789999999999999999999999988664443333
No 147
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=1e-32 Score=294.87 Aligned_cols=198 Identities=27% Similarity=0.451 Sum_probs=172.8
Q ss_pred HHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCC---cccchhhhHHHHHHhhcCCCccceeeceeecCCeEEEEEE
Q 003385 602 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYE 677 (824)
Q Consensus 602 ~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~---~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E 677 (824)
.|.+.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 15 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 94 (284)
T 2vgo_A 15 DFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLE 94 (284)
T ss_dssp GEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEEE
Confidence 3567789999999999999886 57789999986432 1224568899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccccCC
Q 003385 678 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 757 (824)
Q Consensus 678 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~~~ 757 (824)
|+++++|.+++.. ...+++..+..++.|++.||.|||++ +|+||||||+||+++.++.+||+|||++......
T Consensus 95 ~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~ 167 (284)
T 2vgo_A 95 FAPRGELYKELQK----HGRFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL 167 (284)
T ss_dssp CCTTEEHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCTTCEECSSS
T ss_pred eCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecccccccCccc
Confidence 9999999998853 34588999999999999999999998 9999999999999999999999999998654332
Q ss_pred CCceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCCCc
Q 003385 758 ASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEK 809 (824)
Q Consensus 758 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~~~ 809 (824)
......|++.|+|||.+.+..++.++|||||||++|||++|+.||....
T Consensus 168 ---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 216 (284)
T 2vgo_A 168 ---RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPS 216 (284)
T ss_dssp ---CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred ---ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCC
Confidence 1234568999999999999999999999999999999999999998644
No 148
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=6.1e-33 Score=303.65 Aligned_cols=207 Identities=28% Similarity=0.469 Sum_probs=174.4
Q ss_pred HHHHHhhccccccCcEEEEEEEEcC-C-----cEEEEEEeccCCc-ccchhhhHHHHHHhhc-CCCccceeeceeecCCe
Q 003385 600 DATKMLEKKIGSGGFGVVYYGKLKD-G-----KEIAVKVLTSNSY-QGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGR 671 (824)
Q Consensus 600 ~~~~~i~~~LG~G~fg~Vy~a~~~~-g-----~~vAVK~l~~~~~-~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~ 671 (824)
...+.+.+.||+|+||.||+|.+.. + +.||+|+++.... ...+.+.+|+++++++ +||||+++++++.+.+.
T Consensus 45 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 124 (333)
T 2i1m_A 45 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGP 124 (333)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred HHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCc
Confidence 3456678999999999999998753 2 4799999975432 3356788999999999 89999999999999999
Q ss_pred EEEEEEecCCCCHHHHhhcccC----------ccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCC
Q 003385 672 SVLVYEFMHNGTLKEHLYGTLT----------HEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHM 741 (824)
Q Consensus 672 ~~lV~E~~~~gsL~~~L~~~~~----------~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~ 741 (824)
.++||||+++|+|.+++..... ....+++..++.++.|++.||.|||++ +|+||||||+|||++.++
T Consensus 125 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~ 201 (333)
T 2i1m_A 125 VLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGH 201 (333)
T ss_dssp CEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGCEEEGGG
T ss_pred eEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccceEEECCCC
Confidence 9999999999999999854311 134578999999999999999999998 999999999999999999
Q ss_pred cEEEEecCCcccccCCCCc-eeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHc-CCCCCCCCc
Q 003385 742 RAKVSDFGLSKFAVDGASH-VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEK 809 (824)
Q Consensus 742 ~vkL~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~ellt-G~~Pf~~~~ 809 (824)
.+||+|||+++........ ......+|+.|+|||.+.+..++.++|||||||++|||++ |..||.+..
T Consensus 202 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 271 (333)
T 2i1m_A 202 VAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGIL 271 (333)
T ss_dssp EEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred eEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccc
Confidence 9999999999865443322 2233457889999999999999999999999999999998 999998644
No 149
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=1.9e-32 Score=299.58 Aligned_cols=210 Identities=24% Similarity=0.369 Sum_probs=174.7
Q ss_pred cCHHHHHHHHHHhh-ccccccCcEEEEEEEEc-CCcEEEEEEeccCC--cccchhhhHHHHHHhhcC-CCccceeeceee
Q 003385 593 FTLSDIEDATKMLE-KKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIH-HRNLVQFLGYCQ 667 (824)
Q Consensus 593 ~~~~~~~~~~~~i~-~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~--~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~ 667 (824)
+...+....+|.+. +.||+|+||.||+|..+ +++.||+|+++... ......+.+|+.+++++. ||||+++++++.
T Consensus 20 ~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~ 99 (327)
T 3lm5_A 20 FQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYE 99 (327)
T ss_dssp SBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEE
T ss_pred HHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEE
Confidence 33344555566665 88999999999999876 68999999987543 223467889999999995 699999999999
Q ss_pred cCCeEEEEEEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcC---CCcEE
Q 003385 668 EEGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK---HMRAK 744 (824)
Q Consensus 668 ~~~~~~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~---~~~vk 744 (824)
+.+..++||||+++|+|.+++... ....+++..+..++.|++.||+|||++ +|+||||||+|||++. ++.+|
T Consensus 100 ~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~~~~k 174 (327)
T 3lm5_A 100 NTSEIILILEYAAGGEIFSLCLPE--LAEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIK 174 (327)
T ss_dssp CSSEEEEEEECCTTEEGGGGGSSC--C-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTBCCEE
T ss_pred eCCeEEEEEEecCCCcHHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCCCcEE
Confidence 999999999999999999987432 245688999999999999999999998 9999999999999997 78999
Q ss_pred EEecCCcccccCCCCceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCCCc
Q 003385 745 VSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEK 809 (824)
Q Consensus 745 L~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~~~ 809 (824)
|+|||+++...... ......||+.|+|||++....++.++|||||||++|||++|+.||.+..
T Consensus 175 L~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~ 237 (327)
T 3lm5_A 175 IVDFGMSRKIGHAC--ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGED 237 (327)
T ss_dssp ECCGGGCEEC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred EeeCccccccCCcc--ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 99999998654322 2233569999999999999999999999999999999999999997654
No 150
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8.7e-33 Score=304.75 Aligned_cols=210 Identities=25% Similarity=0.311 Sum_probs=171.1
Q ss_pred HHHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCCcc-----cchhhhHHHHHHhhcCCCccceeeceeecCCeEEE
Q 003385 601 ATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ-----GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVL 674 (824)
Q Consensus 601 ~~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~~-----~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~l 674 (824)
..|.+.+.||+|+||.||+|++. +|+.||||+++..... ..+.+.+|++++++++||||+++++++.+.+..++
T Consensus 10 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 89 (346)
T 1ua2_A 10 KRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISL 89 (346)
T ss_dssp ---CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEE
T ss_pred cccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceEE
Confidence 45677899999999999999876 5899999998753221 13467899999999999999999999999999999
Q ss_pred EEEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccc
Q 003385 675 VYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFA 754 (824)
Q Consensus 675 V~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~ 754 (824)
||||+++ +|.+++... ...+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++..
T Consensus 90 v~e~~~~-~l~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~ 162 (346)
T 1ua2_A 90 VFDFMET-DLEVIIKDN---SLVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAKSF 162 (346)
T ss_dssp EEECCSE-EHHHHHTTC---CSSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGGSTT
T ss_pred EEEcCCC-CHHHHHHhc---CcCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEEecccceec
Confidence 9999986 888877532 34577788899999999999999998 9999999999999999999999999999865
Q ss_pred cCCCCceeccccCCCCCcchhccccC-CCCchHHHHHHHHHHHHHHcCCCCCCCCccccchhcHh
Q 003385 755 VDGASHVSSIVRGTVGYLDPEYYISQ-QLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIV 818 (824)
Q Consensus 755 ~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~~DIwSlGvil~elltG~~Pf~~~~~~~~~~~iv 818 (824)
..... ......||+.|+|||++.+. .++.++|||||||++|||++|..||.+....+...++.
T Consensus 163 ~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~ 226 (346)
T 1ua2_A 163 GSPNR-AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIF 226 (346)
T ss_dssp TSCCC-CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred cCCcc-cCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHH
Confidence 43322 23345689999999998754 58899999999999999999999998866444444443
No 151
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=1.7e-32 Score=302.79 Aligned_cols=209 Identities=22% Similarity=0.363 Sum_probs=172.1
Q ss_pred HHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCCcc--cchhhhHHHHHHhhcCCCccceeeceeec--------CC
Q 003385 602 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ--GKREFTNEVTLLSRIHHRNLVQFLGYCQE--------EG 670 (824)
Q Consensus 602 ~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~~--~~~~~~~Ei~il~~l~HpnIv~l~~~~~~--------~~ 670 (824)
+|.+.+.||+|+||.||+|+++ +++.||||++...... ....+.+|++++++++||||+++++++.. .+
T Consensus 18 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 97 (351)
T 3mi9_A 18 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKG 97 (351)
T ss_dssp GEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------C
T ss_pred ceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCCc
Confidence 4667899999999999999985 7899999998654322 24567899999999999999999999876 45
Q ss_pred eEEEEEEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCC
Q 003385 671 RSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGL 750 (824)
Q Consensus 671 ~~~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGl 750 (824)
..++||||+++ +|.+.+... ...+++..+..++.|++.||+|||++ ||+||||||+|||++.++.+||+|||+
T Consensus 98 ~~~lv~e~~~~-~l~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 170 (351)
T 3mi9_A 98 SIYLVFDFCEH-DLAGLLSNV---LVKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGL 170 (351)
T ss_dssp EEEEEEECCSE-EHHHHHHCT---TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred eEEEEEeccCC-CHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEccchh
Confidence 68999999985 777766432 34588999999999999999999998 999999999999999999999999999
Q ss_pred cccccCCC---CceeccccCCCCCcchhcccc-CCCCchHHHHHHHHHHHHHHcCCCCCCCCccccchhcH
Q 003385 751 SKFAVDGA---SHVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNI 817 (824)
Q Consensus 751 a~~~~~~~---~~~~~~~~gt~~y~aPE~l~~-~~~~~~~DIwSlGvil~elltG~~Pf~~~~~~~~~~~i 817 (824)
++...... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+....+....+
T Consensus 171 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i 241 (351)
T 3mi9_A 171 ARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALI 241 (351)
T ss_dssp CEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred cccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Confidence 97654221 122234568999999999876 45899999999999999999999999886644333333
No 152
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=1.5e-33 Score=314.59 Aligned_cols=199 Identities=15% Similarity=0.182 Sum_probs=158.8
Q ss_pred HHHhhccccccCcEEEEEEEE-cCCcEEEEEEeccC---CcccchhhhHHHH---HHhhcCCCccceee-------ceee
Q 003385 602 TKMLEKKIGSGGFGVVYYGKL-KDGKEIAVKVLTSN---SYQGKREFTNEVT---LLSRIHHRNLVQFL-------GYCQ 667 (824)
Q Consensus 602 ~~~i~~~LG~G~fg~Vy~a~~-~~g~~vAVK~l~~~---~~~~~~~~~~Ei~---il~~l~HpnIv~l~-------~~~~ 667 (824)
.|.+.+.||+|+||.||+|++ .+|+.||||++... .....+.+.+|++ ++++++||||++++ +++.
T Consensus 74 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~ 153 (377)
T 3byv_A 74 TLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVK 153 (377)
T ss_dssp EEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEE
T ss_pred eEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhh
Confidence 345678999999999999986 46899999999743 2223467889994 55555799999998 4444
Q ss_pred cCC-----------------eEEEEEEecCCCCHHHHhhcc--cCc-cccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEe
Q 003385 668 EEG-----------------RSVLVYEFMHNGTLKEHLYGT--LTH-EQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIH 727 (824)
Q Consensus 668 ~~~-----------------~~~lV~E~~~~gsL~~~L~~~--~~~-~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvH 727 (824)
+.+ ..++||||+ +|+|.+++... ... ...+++..+..++.||+.||+|||++ +|+|
T Consensus 154 ~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH 229 (377)
T 3byv_A 154 DPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GLVH 229 (377)
T ss_dssp CTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---TEEC
T ss_pred ccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---Ceec
Confidence 442 278999999 68999998542 111 23344678888999999999999998 9999
Q ss_pred cCCCCCCEEEcCCCcEEEEecCCcccccCCCCceeccccCCCCCcchhccccC-----------CCCchHHHHHHHHHHH
Q 003385 728 RDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQ-----------QLTDKSDVYSFGVILL 796 (824)
Q Consensus 728 rDLkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-----------~~~~~~DIwSlGvil~ 796 (824)
|||||+|||++.++.+||+|||+++.... .....+| +.|+|||++... .++.++|||||||++|
T Consensus 230 rDikp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~ 304 (377)
T 3byv_A 230 TYLRPVDIVLDQRGGVFLTGFEHLVRDGA----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIY 304 (377)
T ss_dssp SCCCGGGEEECTTCCEEECCGGGCEETTC----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHH
T ss_pred CCCCHHHEEEcCCCCEEEEechhheecCC----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHH
Confidence 99999999999999999999999975322 3344567 999999999887 8999999999999999
Q ss_pred HHHcCCCCCCCCc
Q 003385 797 ELISGQEAISNEK 809 (824)
Q Consensus 797 elltG~~Pf~~~~ 809 (824)
||++|+.||.+..
T Consensus 305 elltg~~Pf~~~~ 317 (377)
T 3byv_A 305 WIWCADLPITKDA 317 (377)
T ss_dssp HHHHSSCCC----
T ss_pred HHHHCCCCCcccc
Confidence 9999999997644
No 153
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=99.98 E-value=6e-33 Score=311.98 Aligned_cols=202 Identities=25% Similarity=0.399 Sum_probs=170.5
Q ss_pred HHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCCc-ccchhhhHHHHHHhhcCCCccceeeceeecCC--eEEEEEE
Q 003385 602 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY-QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEG--RSVLVYE 677 (824)
Q Consensus 602 ~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~-~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~--~~~lV~E 677 (824)
+|.+.+.||+|+||.||+|+++ +++.||||+++.... ...+.+.+|++++++++||||+++++++...+ ..++|||
T Consensus 10 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~e 89 (396)
T 4eut_A 10 LWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIME 89 (396)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEC
T ss_pred ceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEEe
Confidence 4567789999999999999987 489999999975432 23456789999999999999999999987654 7899999
Q ss_pred ecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEE----cCCCcEEEEecCCccc
Q 003385 678 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILL----DKHMRAKVSDFGLSKF 753 (824)
Q Consensus 678 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl----~~~~~vkL~DFGla~~ 753 (824)
|+++|+|.+++.... ....+++..++.++.|++.||+|||++ +|+||||||+|||+ +.++.+||+|||+++.
T Consensus 90 ~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~ 165 (396)
T 4eut_A 90 FCPCGSLYTVLEEPS-NAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE 165 (396)
T ss_dssp CCTTEEHHHHTTSGG-GTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCGGGCEE
T ss_pred cCCCCCHHHHHHhhh-cccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecCCCceE
Confidence 999999999985432 223389999999999999999999998 99999999999999 7778899999999976
Q ss_pred ccCCCCceeccccCCCCCcchhcccc--------CCCCchHHHHHHHHHHHHHHcCCCCCCCCc
Q 003385 754 AVDGASHVSSIVRGTVGYLDPEYYIS--------QQLTDKSDVYSFGVILLELISGQEAISNEK 809 (824)
Q Consensus 754 ~~~~~~~~~~~~~gt~~y~aPE~l~~--------~~~~~~~DIwSlGvil~elltG~~Pf~~~~ 809 (824)
..... ......||+.|+|||++.. ..++.++|||||||++|||++|+.||....
T Consensus 166 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~ 227 (396)
T 4eut_A 166 LEDDE--QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFE 227 (396)
T ss_dssp CCCGG--GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTT
T ss_pred ccCCC--ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCC
Confidence 54322 2234569999999999875 567789999999999999999999997644
No 154
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=99.98 E-value=7.9e-33 Score=300.46 Aligned_cols=204 Identities=25% Similarity=0.385 Sum_probs=170.9
Q ss_pred HHHHhhccccccCcEEEEEEEE-cCCcEEEEEEeccCCcccchhhhHHHHHHhhcCCCccceeeceee----cCCeEEEE
Q 003385 601 ATKMLEKKIGSGGFGVVYYGKL-KDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQ----EEGRSVLV 675 (824)
Q Consensus 601 ~~~~i~~~LG~G~fg~Vy~a~~-~~g~~vAVK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~----~~~~~~lV 675 (824)
..|.+.+.||+|+||.||+|+. .+++.||||++........+.+.+|++++++++||||+++++++. .....++|
T Consensus 29 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv 108 (317)
T 2buj_A 29 KHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLL 108 (317)
T ss_dssp EEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEE
T ss_pred eEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEE
Confidence 4566789999999999999997 478999999987665556678899999999999999999999986 34578999
Q ss_pred EEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCccccc
Q 003385 676 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAV 755 (824)
Q Consensus 676 ~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~ 755 (824)
|||+++|+|.+++.........+++..++.++.|++.||.|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 109 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~ 185 (317)
T 2buj_A 109 LPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSMNQAC 185 (317)
T ss_dssp EECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSSCEESC
T ss_pred EEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCcchhcc
Confidence 999999999999865444556789999999999999999999998 99999999999999999999999999886542
Q ss_pred CCCCc--------eeccccCCCCCcchhccccCC---CCchHHHHHHHHHHHHHHcCCCCCCC
Q 003385 756 DGASH--------VSSIVRGTVGYLDPEYYISQQ---LTDKSDVYSFGVILLELISGQEAISN 807 (824)
Q Consensus 756 ~~~~~--------~~~~~~gt~~y~aPE~l~~~~---~~~~~DIwSlGvil~elltG~~Pf~~ 807 (824)
..... ......||+.|+|||.+.... ++.++|||||||++|||++|+.||..
T Consensus 186 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~ 248 (317)
T 2buj_A 186 IHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDM 248 (317)
T ss_dssp EEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHH
T ss_pred cccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhh
Confidence 21100 012234799999999987554 68899999999999999999999953
No 155
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=99.98 E-value=2e-32 Score=290.87 Aligned_cols=202 Identities=24% Similarity=0.415 Sum_probs=173.9
Q ss_pred HHHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCC-cccchhhhHHHHHHhhcCCCccceeeceeecCCeEEEEEEe
Q 003385 601 ATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 678 (824)
Q Consensus 601 ~~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~ 678 (824)
..|.+.+.||+|+||.||+|+++ +++.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 86 (276)
T 2yex_A 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 86 (276)
T ss_dssp HHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEe
Confidence 45677899999999999999986 68999999986443 23346788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccccCCC
Q 003385 679 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 758 (824)
Q Consensus 679 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~ 758 (824)
+++++|.+++. ....+++..+..++.|++.||.|||++ +|+||||||+||+++.++.+||+|||++.......
T Consensus 87 ~~~~~L~~~l~----~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 159 (276)
T 2yex_A 87 CSGGELFDRIE----PDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNN 159 (276)
T ss_dssp CTTEEGGGGSB----TTTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEETT
T ss_pred cCCCcHHHHHh----hccCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCCccccCCCc
Confidence 99999998874 345688999999999999999999998 99999999999999999999999999997654322
Q ss_pred C-ceeccccCCCCCcchhccccCCC-CchHHHHHHHHHHHHHHcCCCCCCCCc
Q 003385 759 S-HVSSIVRGTVGYLDPEYYISQQL-TDKSDVYSFGVILLELISGQEAISNEK 809 (824)
Q Consensus 759 ~-~~~~~~~gt~~y~aPE~l~~~~~-~~~~DIwSlGvil~elltG~~Pf~~~~ 809 (824)
. .......||+.|+|||.+.+..+ +.++|||||||++|||++|+.||....
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 212 (276)
T 2yex_A 160 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS 212 (276)
T ss_dssp EECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSC
T ss_pred chhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCc
Confidence 1 12334568999999999987765 678999999999999999999997643
No 156
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=99.98 E-value=6.1e-33 Score=298.99 Aligned_cols=202 Identities=31% Similarity=0.506 Sum_probs=170.5
Q ss_pred HHHHHHhhccccccCcEEEEEEEE-----cCCcEEEEEEeccCCc-ccchhhhHHHHHHhhcCCCccceeeceeecC--C
Q 003385 599 EDATKMLEKKIGSGGFGVVYYGKL-----KDGKEIAVKVLTSNSY-QGKREFTNEVTLLSRIHHRNLVQFLGYCQEE--G 670 (824)
Q Consensus 599 ~~~~~~i~~~LG~G~fg~Vy~a~~-----~~g~~vAVK~l~~~~~-~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~--~ 670 (824)
....+.+.+.||+|+||.||+|++ .+++.||||+++.... ...+.+.+|++++++++||||+++++++.+. +
T Consensus 19 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 98 (302)
T 4e5w_A 19 EKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGN 98 (302)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---C
T ss_pred hhhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCc
Confidence 344566789999999999999984 3688999999975432 2346788999999999999999999999876 6
Q ss_pred eEEEEEEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCC
Q 003385 671 RSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGL 750 (824)
Q Consensus 671 ~~~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGl 750 (824)
..++||||+++++|.+++... ...+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 99 ~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~ 172 (302)
T 4e5w_A 99 GIKLIMEFLPSGSLKEYLPKN---KNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGL 172 (302)
T ss_dssp CEEEEEECCTTCBHHHHHHHH---TTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTT
T ss_pred eEEEEEEeCCCCcHHHHHHhc---cccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECcccc
Confidence 689999999999999998532 34588999999999999999999998 999999999999999999999999999
Q ss_pred cccccCCCCc--eeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCC
Q 003385 751 SKFAVDGASH--VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAIS 806 (824)
Q Consensus 751 a~~~~~~~~~--~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~ 806 (824)
++........ ......||..|+|||.+.+..++.++||||+||++|||++|..|+.
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~ 230 (302)
T 4e5w_A 173 TKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDS 230 (302)
T ss_dssp CEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGG
T ss_pred cccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCc
Confidence 9866543321 2234558888999999999999999999999999999999998864
No 157
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=99.98 E-value=1.3e-32 Score=293.61 Aligned_cols=201 Identities=26% Similarity=0.448 Sum_probs=167.2
Q ss_pred HHHhhccccccCcEEEEEEEEcC----CcEEEEEEeccCC-cccchhhhHHHHHHhhcCCCccceeeceeecCCeEEEEE
Q 003385 602 TKMLEKKIGSGGFGVVYYGKLKD----GKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVY 676 (824)
Q Consensus 602 ~~~i~~~LG~G~fg~Vy~a~~~~----g~~vAVK~l~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~ 676 (824)
.+.+.+.||+|+||.||+|++.. +..||+|+++... ....+.+.+|++++++++||||+++++++.+. ..++||
T Consensus 13 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~~~v~ 91 (281)
T 3cc6_A 13 DVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE-PTWIIM 91 (281)
T ss_dssp GEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS-SCEEEE
T ss_pred ceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-CCEEEE
Confidence 45577899999999999998653 2359999987653 23456788999999999999999999998754 468999
Q ss_pred EecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccccC
Q 003385 677 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVD 756 (824)
Q Consensus 677 E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~~ 756 (824)
||+++++|.+++... ...+++..+..++.|++.||.|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 92 e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 165 (281)
T 3cc6_A 92 ELYPYGELGHYLERN---KNSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGLSRYIED 165 (281)
T ss_dssp ECCTTCBHHHHHHHH---TTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCCCGGGCC--
T ss_pred ecCCCCCHHHHHHhc---cccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCccCCCccccc
Confidence 999999999998532 34578999999999999999999998 999999999999999999999999999986654
Q ss_pred CCCceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHc-CCCCCCCCc
Q 003385 757 GASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEK 809 (824)
Q Consensus 757 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~ellt-G~~Pf~~~~ 809 (824)
..........+|+.|+|||.+....++.++|||||||++|||++ |+.||....
T Consensus 166 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~ 219 (281)
T 3cc6_A 166 EDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLE 219 (281)
T ss_dssp -------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC
T ss_pred ccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCC
Confidence 33333344557889999999999999999999999999999998 999997543
No 158
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=99.98 E-value=2.4e-32 Score=292.35 Aligned_cols=196 Identities=36% Similarity=0.605 Sum_probs=166.8
Q ss_pred HHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCCccc-------chhhhHHHHHHhhcCCCccceeeceeecCCeEE
Q 003385 602 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQG-------KREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSV 673 (824)
Q Consensus 602 ~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~~~-------~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 673 (824)
.|.+.+.||+|+||.||+|++. +++.||+|++....... .+.+.+|++++++++||||+++++++.+.. +
T Consensus 20 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~ 97 (287)
T 4f0f_A 20 EIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP--R 97 (287)
T ss_dssp TEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--E
T ss_pred cceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--e
Confidence 4567789999999999999885 78899999986543222 156889999999999999999999997765 6
Q ss_pred EEEEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCC--eEecCCCCCCEEEcCCCc-----EEEE
Q 003385 674 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPA--IIHRDLKSSNILLDKHMR-----AKVS 746 (824)
Q Consensus 674 lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~g--IvHrDLkp~NILl~~~~~-----vkL~ 746 (824)
+||||+++|+|.+.+.. ....+++..+..++.|++.||+|||++ + |+||||||+|||++.++. +||+
T Consensus 98 lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~~~~~kl~ 171 (287)
T 4f0f_A 98 MVMEFVPCGDLYHRLLD---KAHPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAPVCAKVA 171 (287)
T ss_dssp EEEECCTTCBHHHHHHC---TTSCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTCSCCEEEC
T ss_pred EEEEecCCCCHHHHHhc---ccCCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCCceeEEeC
Confidence 99999999999988853 345689999999999999999999998 7 999999999999988776 9999
Q ss_pred ecCCcccccCCCCceeccccCCCCCcchhccc--cCCCCchHHHHHHHHHHHHHHcCCCCCCCCc
Q 003385 747 DFGLSKFAVDGASHVSSIVRGTVGYLDPEYYI--SQQLTDKSDVYSFGVILLELISGQEAISNEK 809 (824)
Q Consensus 747 DFGla~~~~~~~~~~~~~~~gt~~y~aPE~l~--~~~~~~~~DIwSlGvil~elltG~~Pf~~~~ 809 (824)
|||+++.... ......||+.|+|||++. ...++.++||||+||++|||++|+.||....
T Consensus 172 Dfg~~~~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~ 232 (287)
T 4f0f_A 172 DFGLSQQSVH----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYS 232 (287)
T ss_dssp CCTTCBCCSS----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred CCCccccccc----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCcccc
Confidence 9999875432 233456899999999984 4567889999999999999999999997644
No 159
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=99.98 E-value=2.3e-32 Score=317.06 Aligned_cols=199 Identities=31% Similarity=0.506 Sum_probs=169.7
Q ss_pred HHHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCCc-------------ccchhhhHHHHHHhhcCCCccceeecee
Q 003385 601 ATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY-------------QGKREFTNEVTLLSRIHHRNLVQFLGYC 666 (824)
Q Consensus 601 ~~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~-------------~~~~~~~~Ei~il~~l~HpnIv~l~~~~ 666 (824)
..|.+.++||+|+||+||+|+++ +++.||||+++.... ...+.+.+|++++++++||||+++++++
T Consensus 36 ~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~ 115 (504)
T 3q5i_A 36 ESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVF 115 (504)
T ss_dssp GTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred cceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEE
Confidence 35667899999999999999986 578999999875431 2235688999999999999999999999
Q ss_pred ecCCeEEEEEEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCC---cE
Q 003385 667 QEEGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHM---RA 743 (824)
Q Consensus 667 ~~~~~~~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~---~v 743 (824)
.+....++||||+++|+|.+.+.. ...+++..+..++.|++.||.|||++ +|+||||||+|||++.++ .+
T Consensus 116 ~~~~~~~lv~e~~~gg~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~ 188 (504)
T 3q5i_A 116 EDKKYFYLVTEFYEGGELFEQIIN----RHKFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLNI 188 (504)
T ss_dssp ECSSEEEEEEECCTTCBHHHHHHH----HSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESSTTCCSSE
T ss_pred EcCCEEEEEEecCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecCCCCccE
Confidence 999999999999999999998843 35689999999999999999999998 999999999999999775 69
Q ss_pred EEEecCCcccccCCCCceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCCCc
Q 003385 744 KVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEK 809 (824)
Q Consensus 744 kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~~~ 809 (824)
||+|||+++...... ......||+.|+|||++. ..++.++||||+||++|+|++|+.||.+..
T Consensus 189 kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~ 251 (504)
T 3q5i_A 189 KIVDFGLSSFFSKDY--KLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQN 251 (504)
T ss_dssp EECCCTTCEECCTTS--CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred EEEECCCCEEcCCCC--ccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 999999998664432 233456999999999876 568999999999999999999999998755
No 160
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=99.98 E-value=2.3e-33 Score=300.28 Aligned_cols=196 Identities=28% Similarity=0.485 Sum_probs=168.2
Q ss_pred HHHHhhccccccCcEEEEEEEEcC-C-------cEEEEEEeccCCcccchhhhHHHHHHhhcCCCccceeeceeecCCeE
Q 003385 601 ATKMLEKKIGSGGFGVVYYGKLKD-G-------KEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRS 672 (824)
Q Consensus 601 ~~~~i~~~LG~G~fg~Vy~a~~~~-g-------~~vAVK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ 672 (824)
..|.+.+.||+|+||.||+|+++. + +.||+|++........+.+.+|++++++++||||+++++++.+.+..
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 87 (289)
T 4fvq_A 8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDEN 87 (289)
T ss_dssp GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCC
T ss_pred hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCC
Confidence 345678899999999999998653 3 47999999766555567899999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCc--------EE
Q 003385 673 VLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMR--------AK 744 (824)
Q Consensus 673 ~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~--------vk 744 (824)
++||||+++|+|.+++... ...+++..+..++.|++.||.|||++ +|+||||||+|||++.++. +|
T Consensus 88 ~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~k 161 (289)
T 4fvq_A 88 ILVQEFVKFGSLDTYLKKN---KNCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPPFIK 161 (289)
T ss_dssp EEEEECCTTCBHHHHHHHT---GGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBCCEEE
T ss_pred EEEEECCCCCCHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCcccccccceee
Confidence 9999999999999998542 33488999999999999999999998 9999999999999998887 99
Q ss_pred EEecCCcccccCCCCceeccccCCCCCcchhcccc-CCCCchHHHHHHHHHHHHHHcCC-CCCCC
Q 003385 745 VSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQ-EAISN 807 (824)
Q Consensus 745 L~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~~DIwSlGvil~elltG~-~Pf~~ 807 (824)
|+|||++..... .....||+.|+|||.+.+ ..++.++|||||||++|||++|. .||..
T Consensus 162 l~Dfg~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~ 221 (289)
T 4fvq_A 162 LSDPGISITVLP-----KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSA 221 (289)
T ss_dssp ECCCCSCTTTSC-----HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred eccCcccccccC-----ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccc
Confidence 999999865422 123457899999999987 67899999999999999999955 45543
No 161
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=99.98 E-value=1.5e-32 Score=308.67 Aligned_cols=208 Identities=26% Similarity=0.373 Sum_probs=169.2
Q ss_pred HHHhhccccccCcEEEEEEEEcCCcEEEEEEeccCCcccchhhhHHHHHHhhcCCCccceeeceeecCC------eEEEE
Q 003385 602 TKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEG------RSVLV 675 (824)
Q Consensus 602 ~~~i~~~LG~G~fg~Vy~a~~~~g~~vAVK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~------~~~lV 675 (824)
.|.+.+.||+|+||.||+|++..+..||+|++... .+...+|+++++.++||||+++++++...+ ..++|
T Consensus 41 ~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~----~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv 116 (394)
T 4e7w_A 41 AYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQD----KRFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLV 116 (394)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECC----TTSCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEE
T ss_pred eEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecC----cchHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEE
Confidence 46678999999999999999988888999987543 233457999999999999999999985433 37899
Q ss_pred EEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEc-CCCcEEEEecCCcccc
Q 003385 676 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLD-KHMRAKVSDFGLSKFA 754 (824)
Q Consensus 676 ~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~-~~~~vkL~DFGla~~~ 754 (824)
|||++++.+ ..+.........+++..+..++.|++.||+|||++ +|+||||||+|||++ .++.+||+|||+++..
T Consensus 117 ~e~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~ 192 (394)
T 4e7w_A 117 LEYVPETVY-RASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSAKIL 192 (394)
T ss_dssp EECCSEEHH-HHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred eeccCccHH-HHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCCCcccc
Confidence 999987543 33332223356788999999999999999999998 999999999999999 7899999999999865
Q ss_pred cCCCCceeccccCCCCCcchhccccC-CCCchHHHHHHHHHHHHHHcCCCCCCCCccccchhcHhh
Q 003385 755 VDGASHVSSIVRGTVGYLDPEYYISQ-QLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQ 819 (824)
Q Consensus 755 ~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~~DIwSlGvil~elltG~~Pf~~~~~~~~~~~iv~ 819 (824)
..... .....||+.|+|||++.+. .++.++||||+||++|||++|+.||.+....+...++++
T Consensus 193 ~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~ 256 (394)
T 4e7w_A 193 IAGEP--NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIK 256 (394)
T ss_dssp CTTCC--CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred cCCCC--CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 44332 2334689999999998765 589999999999999999999999998765544445444
No 162
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=99.98 E-value=1.1e-32 Score=303.80 Aligned_cols=202 Identities=22% Similarity=0.295 Sum_probs=164.2
Q ss_pred HHHHHHHhhccccccCcEEEEEEEEc----CCcEEEEEEeccCCcc-----------cchhhhHHHHHHhhcCCCcccee
Q 003385 598 IEDATKMLEKKIGSGGFGVVYYGKLK----DGKEIAVKVLTSNSYQ-----------GKREFTNEVTLLSRIHHRNLVQF 662 (824)
Q Consensus 598 ~~~~~~~i~~~LG~G~fg~Vy~a~~~----~g~~vAVK~l~~~~~~-----------~~~~~~~Ei~il~~l~HpnIv~l 662 (824)
+....|.+.+.||+|+||.||+|.+. .+..+|||++...... ..+.+.+|+..++.++||||+++
T Consensus 34 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~ 113 (345)
T 2v62_A 34 MEGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLF 113 (345)
T ss_dssp TTSCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCE
T ss_pred ccCceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCccee
Confidence 33445677899999999999999986 5678999998754321 12346678889999999999999
Q ss_pred eceeec----CCeEEEEEEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEc
Q 003385 663 LGYCQE----EGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLD 738 (824)
Q Consensus 663 ~~~~~~----~~~~~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~ 738 (824)
++++.. ....++||||+ +++|.+++.. ...+++..++.++.|++.||+|||++ +|+||||||+|||++
T Consensus 114 ~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~ 185 (345)
T 2v62_A 114 YGSGLTEFKGRSYRFMVMERL-GIDLQKISGQ----NGTFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLG 185 (345)
T ss_dssp EEEEEEESSSCEEEEEEEECE-EEEHHHHCBG----GGBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEE
T ss_pred ecccccccCCCcEEEEEEecc-CCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEc
Confidence 999877 67889999999 9999998843 33789999999999999999999998 999999999999999
Q ss_pred CCC--cEEEEecCCcccccCCCC------ceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCC
Q 003385 739 KHM--RAKVSDFGLSKFAVDGAS------HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISN 807 (824)
Q Consensus 739 ~~~--~vkL~DFGla~~~~~~~~------~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~ 807 (824)
.++ .+||+|||+++....... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.+
T Consensus 186 ~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~ 262 (345)
T 2v62_A 186 YKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQ 262 (345)
T ss_dssp SSSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGG
T ss_pred cCCCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccc
Confidence 887 999999999976533211 112345699999999999999999999999999999999999999965
No 163
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=99.98 E-value=1.6e-32 Score=309.43 Aligned_cols=197 Identities=24% Similarity=0.370 Sum_probs=152.1
Q ss_pred hccccccCcEEEEEEEEc---CCcEEEEEEeccCCcccchhhhHHHHHHhhcCCCccceeeceee--cCCeEEEEEEecC
Q 003385 606 EKKIGSGGFGVVYYGKLK---DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQ--EEGRSVLVYEFMH 680 (824)
Q Consensus 606 ~~~LG~G~fg~Vy~a~~~---~g~~vAVK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~--~~~~~~lV~E~~~ 680 (824)
+++||+|+||.||+|+++ +++.||||++.... ..+.+.+|+++|++++||||+++++++. .....++||||++
T Consensus 26 g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~~~ 103 (405)
T 3rgf_A 26 GCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE 103 (405)
T ss_dssp SCCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEECCS
T ss_pred CcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEeCCC
Confidence 568999999999999976 57889999996442 2456889999999999999999999994 4678999999997
Q ss_pred CCCHHHHhhccc-----CccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEE----cCCCcEEEEecCCc
Q 003385 681 NGTLKEHLYGTL-----THEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILL----DKHMRAKVSDFGLS 751 (824)
Q Consensus 681 ~gsL~~~L~~~~-----~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl----~~~~~vkL~DFGla 751 (824)
++|.+++.... .....+++..+..++.||+.||.|||++ +|+||||||+|||+ +.++.+||+|||++
T Consensus 104 -~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a 179 (405)
T 3rgf_A 104 -HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGFA 179 (405)
T ss_dssp -EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTTCEEECCTTCC
T ss_pred -CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCCcEEEEECCCc
Confidence 47777764221 1223488999999999999999999998 99999999999999 67789999999999
Q ss_pred ccccCCCC--ceeccccCCCCCcchhccccC-CCCchHHHHHHHHHHHHHHcCCCCCCCC
Q 003385 752 KFAVDGAS--HVSSIVRGTVGYLDPEYYISQ-QLTDKSDVYSFGVILLELISGQEAISNE 808 (824)
Q Consensus 752 ~~~~~~~~--~~~~~~~gt~~y~aPE~l~~~-~~~~~~DIwSlGvil~elltG~~Pf~~~ 808 (824)
+....... ......+||+.|+|||++.+. .++.++|||||||++|||++|+.||.+.
T Consensus 180 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 239 (405)
T 3rgf_A 180 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 239 (405)
T ss_dssp C----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCC
T ss_pred eecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCc
Confidence 86543221 122345689999999999874 5899999999999999999999999754
No 164
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=99.98 E-value=1.7e-32 Score=305.62 Aligned_cols=200 Identities=25% Similarity=0.333 Sum_probs=161.9
Q ss_pred HHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCC--cccchhhhHHHHHHhhcCCCccceeeceeecCC------eE
Q 003385 602 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEG------RS 672 (824)
Q Consensus 602 ~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~--~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~------~~ 672 (824)
.|.+.+.||+|+||.||+|.+. +++.||||++.... ....+.+.+|+++++.++||||+++++++...+ ..
T Consensus 26 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 105 (371)
T 2xrw_A 26 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDV 105 (371)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCEE
T ss_pred heeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccce
Confidence 4567789999999999999876 68899999997532 223456889999999999999999999987654 78
Q ss_pred EEEEEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcc
Q 003385 673 VLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSK 752 (824)
Q Consensus 673 ~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~ 752 (824)
++||||+++ +|.+.+. ..+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||+++
T Consensus 106 ~lv~e~~~~-~l~~~~~------~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~ 175 (371)
T 2xrw_A 106 YIVMELMDA-NLCQVIQ------MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR 175 (371)
T ss_dssp EEEEECCSE-EHHHHHH------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCC--
T ss_pred EEEEEcCCC-CHHHHHh------hccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEeeccc
Confidence 999999975 6877773 3478888999999999999999998 99999999999999999999999999997
Q ss_pred cccCCCCceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCCCccccc
Q 003385 753 FAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGAN 813 (824)
Q Consensus 753 ~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~~~~~~~ 813 (824)
...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.+....+.
T Consensus 176 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~ 234 (371)
T 2xrw_A 176 TAGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQ 234 (371)
T ss_dssp ----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred cccccc--ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 654321 22345689999999999999999999999999999999999999988664333
No 165
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=99.98 E-value=2.7e-32 Score=290.78 Aligned_cols=200 Identities=19% Similarity=0.314 Sum_probs=170.1
Q ss_pred HHHHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCC--cccchhhhHHHHHHhhc-CCCccceeeceeecCCeEEEE
Q 003385 600 DATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLV 675 (824)
Q Consensus 600 ~~~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~--~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~lV 675 (824)
...|.+.+.||+|+||.||+|++. +++.||||+++... ......+.+|+..+.++ +||||+++++++.+.+..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv 89 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ 89 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence 456777899999999999999986 78999999987542 23345678899999999 899999999999999999999
Q ss_pred EEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCC---------------
Q 003385 676 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKH--------------- 740 (824)
Q Consensus 676 ~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~--------------- 740 (824)
|||+++++|.+++.........+++..+..++.|++.||.|||++ +|+||||||+|||++.+
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~ 166 (289)
T 1x8b_A 90 NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDEDDW 166 (289)
T ss_dssp EECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC-----------------
T ss_pred EEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCcccccccccccc
Confidence 999999999999965433346689999999999999999999998 99999999999999844
Q ss_pred ----CcEEEEecCCcccccCCCCceeccccCCCCCcchhccccC-CCCchHHHHHHHHHHHHHHcCCCCCCC
Q 003385 741 ----MRAKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQ-QLTDKSDVYSFGVILLELISGQEAISN 807 (824)
Q Consensus 741 ----~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~~DIwSlGvil~elltG~~Pf~~ 807 (824)
..+||+|||.+....... ...||+.|+|||.+.+. .++.++|||||||++|||++|..|+..
T Consensus 167 ~~~~~~~kl~Dfg~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~ 233 (289)
T 1x8b_A 167 ASNKVMFKIGDLGHVTRISSPQ-----VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRN 233 (289)
T ss_dssp ---CCCEEECCCTTCEETTCSC-----CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSS
T ss_pred cCCceEEEEcccccccccCCcc-----ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcc
Confidence 479999999987654322 23489999999999866 566899999999999999999987644
No 166
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=99.98 E-value=3.7e-32 Score=302.25 Aligned_cols=200 Identities=27% Similarity=0.439 Sum_probs=172.5
Q ss_pred HHHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCCcc--------cchhhhHHHHHHhhc-CCCccceeeceeecCC
Q 003385 601 ATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ--------GKREFTNEVTLLSRI-HHRNLVQFLGYCQEEG 670 (824)
Q Consensus 601 ~~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~~--------~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~ 670 (824)
..|.+.+.||+|+||.||+|+++ +|+.||||+++..... ..+.+.+|+.+++++ +||||+++++++...+
T Consensus 94 ~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 173 (365)
T 2y7j_A 94 QKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSS 173 (365)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSS
T ss_pred hhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCC
Confidence 45666789999999999999986 7999999998754311 134578899999999 7999999999999999
Q ss_pred eEEEEEEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCC
Q 003385 671 RSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGL 750 (824)
Q Consensus 671 ~~~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGl 750 (824)
..++||||+++++|.+++.. ...+++..+..++.|++.||.|||+. ||+||||||+|||++.++.+||+|||+
T Consensus 174 ~~~lv~e~~~g~~L~~~l~~----~~~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~~~ikl~DfG~ 246 (365)
T 2y7j_A 174 FMFLVFDLMRKGELFDYLTE----KVALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQIRLSDFGF 246 (365)
T ss_dssp EEEEEECCCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred EEEEEEEeCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEEecCc
Confidence 99999999999999998853 35688999999999999999999998 999999999999999999999999999
Q ss_pred cccccCCCCceeccccCCCCCcchhcccc------CCCCchHHHHHHHHHHHHHHcCCCCCCCCc
Q 003385 751 SKFAVDGASHVSSIVRGTVGYLDPEYYIS------QQLTDKSDVYSFGVILLELISGQEAISNEK 809 (824)
Q Consensus 751 a~~~~~~~~~~~~~~~gt~~y~aPE~l~~------~~~~~~~DIwSlGvil~elltG~~Pf~~~~ 809 (824)
+....... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+..
T Consensus 247 ~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~ 309 (365)
T 2y7j_A 247 SCHLEPGE--KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRR 309 (365)
T ss_dssp CEECCTTC--CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred ccccCCCc--ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCC
Confidence 87654432 2234569999999999864 357889999999999999999999997643
No 167
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=99.98 E-value=2.4e-32 Score=303.42 Aligned_cols=209 Identities=23% Similarity=0.359 Sum_probs=174.4
Q ss_pred HHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCCc-ccchhhhHHHHHHhhcCCCccceeeceeecC-----CeEEE
Q 003385 602 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY-QGKREFTNEVTLLSRIHHRNLVQFLGYCQEE-----GRSVL 674 (824)
Q Consensus 602 ~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~-~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~-----~~~~l 674 (824)
+|.+.+.||+|+||.||+|.+. +++.||||++..... ...+.+.+|++++++++||||+++++++... ...++
T Consensus 28 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~i 107 (364)
T 3qyz_A 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYI 107 (364)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEE
T ss_pred cEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEEE
Confidence 4667899999999999999876 678899999975332 2346788999999999999999999998654 46899
Q ss_pred EEEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccc
Q 003385 675 VYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFA 754 (824)
Q Consensus 675 V~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~ 754 (824)
||||++ |+|.+++.. ..+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||+++..
T Consensus 108 v~e~~~-~~L~~~l~~-----~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~ 178 (364)
T 3qyz_A 108 VQDLME-TDLYKLLKT-----QHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVA 178 (364)
T ss_dssp EEECCS-EEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEcccC-cCHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcceEec
Confidence 999997 589888742 4588999999999999999999998 9999999999999999999999999999865
Q ss_pred cCCCCce--eccccCCCCCcchhcccc-CCCCchHHHHHHHHHHHHHHcCCCCCCCCccccchhcHhh
Q 003385 755 VDGASHV--SSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQ 819 (824)
Q Consensus 755 ~~~~~~~--~~~~~gt~~y~aPE~l~~-~~~~~~~DIwSlGvil~elltG~~Pf~~~~~~~~~~~iv~ 819 (824)
....... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+....+....+++
T Consensus 179 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~ 246 (364)
T 3qyz_A 179 DPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 246 (364)
T ss_dssp CGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHH
T ss_pred CCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHH
Confidence 4322211 233469999999998764 4589999999999999999999999998776655555543
No 168
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=99.98 E-value=3.7e-32 Score=293.36 Aligned_cols=198 Identities=26% Similarity=0.439 Sum_probs=174.0
Q ss_pred HHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCCc-ccchhhhHHHHHHhhcCCCccceeeceeecCCeEEEEEEecC
Q 003385 603 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY-QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 680 (824)
Q Consensus 603 ~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~-~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~~ 680 (824)
|.+.+.||+|+||.||+|... +++.||||++..... ...+.+.+|+.++++++||||+++++++.+.+..++||||++
T Consensus 24 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 103 (303)
T 3a7i_A 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLG 103 (303)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred HHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEeCC
Confidence 556789999999999999875 688999999975432 334678999999999999999999999999999999999999
Q ss_pred CCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccccCCCCc
Q 003385 681 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 760 (824)
Q Consensus 681 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~~~ 760 (824)
+++|.+++. ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++........
T Consensus 104 ~~~L~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 174 (303)
T 3a7i_A 104 GGSALDLLE-----PGPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI- 174 (303)
T ss_dssp TEEHHHHHT-----TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBC-
T ss_pred CCcHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecccceecCcccc-
Confidence 999999884 24688999999999999999999998 999999999999999999999999999976544322
Q ss_pred eeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCCCc
Q 003385 761 VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEK 809 (824)
Q Consensus 761 ~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~~~ 809 (824)
......||+.|+|||.+....++.++|||||||++|||++|+.||....
T Consensus 175 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 223 (303)
T 3a7i_A 175 KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELH 223 (303)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred ccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcC
Confidence 2234568999999999999999999999999999999999999997643
No 169
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=99.98 E-value=4.4e-32 Score=295.75 Aligned_cols=201 Identities=26% Similarity=0.455 Sum_probs=167.8
Q ss_pred HHHHHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCCc--------ccchhhhHHHHHHhhcCCCccceeeceeecC
Q 003385 599 EDATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY--------QGKREFTNEVTLLSRIHHRNLVQFLGYCQEE 669 (824)
Q Consensus 599 ~~~~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~--------~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~ 669 (824)
....|.+.+.||+|+||.||+|++. +++.||||++..... .....+.+|++++++++||||+++++++...
T Consensus 8 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 87 (322)
T 2ycf_A 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE 87 (322)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS
T ss_pred hhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC
Confidence 3456788899999999999999876 578999999864321 1234688999999999999999999998766
Q ss_pred CeEEEEEEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCc---EEEE
Q 003385 670 GRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMR---AKVS 746 (824)
Q Consensus 670 ~~~~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~---vkL~ 746 (824)
+ .++||||+++++|.+++. ....+++..+..++.|++.||.|||++ +|+||||||+|||++.++. +||+
T Consensus 88 ~-~~lv~e~~~~~~L~~~~~----~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~ 159 (322)
T 2ycf_A 88 D-YYIVLELMEGGELFDKVV----GNKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKIT 159 (322)
T ss_dssp S-EEEEEECCTTEETHHHHS----TTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSCCEEEC
T ss_pred c-eEEEEecCCCCcHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCCeEEEc
Confidence 5 799999999999999884 345688999999999999999999998 9999999999999987654 9999
Q ss_pred ecCCcccccCCCCceeccccCCCCCcchhccc---cCCCCchHHHHHHHHHHHHHHcCCCCCCCCc
Q 003385 747 DFGLSKFAVDGASHVSSIVRGTVGYLDPEYYI---SQQLTDKSDVYSFGVILLELISGQEAISNEK 809 (824)
Q Consensus 747 DFGla~~~~~~~~~~~~~~~gt~~y~aPE~l~---~~~~~~~~DIwSlGvil~elltG~~Pf~~~~ 809 (824)
|||+++..... .......||+.|+|||++. ...++.++|||||||++|||++|+.||....
T Consensus 160 Dfg~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 223 (322)
T 2ycf_A 160 DFGHSKILGET--SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 223 (322)
T ss_dssp CCTTCEECCCC--HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTT
T ss_pred cCccceecccc--cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccc
Confidence 99999765332 2223456899999999974 4678899999999999999999999997644
No 170
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=99.98 E-value=1.5e-32 Score=308.19 Aligned_cols=197 Identities=24% Similarity=0.369 Sum_probs=165.4
Q ss_pred HHHhhccccccCcEEEEEEEEcCCcEEEEEEeccCC--cccchhhhHHHHHHhhcC--CCccceeeceeecCCeEEEEEE
Q 003385 602 TKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIH--HRNLVQFLGYCQEEGRSVLVYE 677 (824)
Q Consensus 602 ~~~i~~~LG~G~fg~Vy~a~~~~g~~vAVK~l~~~~--~~~~~~~~~Ei~il~~l~--HpnIv~l~~~~~~~~~~~lV~E 677 (824)
.|.+.+.||+|+||.||+|...+++.||||++.... ....+.+.+|++++++++ ||||+++++++...+..++|||
T Consensus 57 ~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~E 136 (390)
T 2zmd_A 57 IYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME 136 (390)
T ss_dssp EEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE
T ss_pred ceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEEe
Confidence 366788999999999999998889999999987543 233467889999999996 5999999999999999999999
Q ss_pred ecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccccCC
Q 003385 678 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 757 (824)
Q Consensus 678 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~~~ 757 (824)
+.+++|.+++.. ...+++..+..++.||+.||.|||+. +|+||||||+|||++ ++.+||+|||+++.....
T Consensus 137 -~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~ 207 (390)
T 2zmd_A 137 -CGNIDLNSWLKK----KKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPD 207 (390)
T ss_dssp -CCSEEHHHHHHH----CSSCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCSSSCCC---
T ss_pred -cCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecCccccccCC
Confidence 568899998853 34678889999999999999999998 999999999999995 588999999999866443
Q ss_pred CCc-eeccccCCCCCcchhcccc-----------CCCCchHHHHHHHHHHHHHHcCCCCCCC
Q 003385 758 ASH-VSSIVRGTVGYLDPEYYIS-----------QQLTDKSDVYSFGVILLELISGQEAISN 807 (824)
Q Consensus 758 ~~~-~~~~~~gt~~y~aPE~l~~-----------~~~~~~~DIwSlGvil~elltG~~Pf~~ 807 (824)
... .....+||+.|+|||++.. ..++.++|||||||++|||++|+.||..
T Consensus 208 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~ 269 (390)
T 2zmd_A 208 TTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ 269 (390)
T ss_dssp ------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred CccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchh
Confidence 222 2344579999999999865 3688999999999999999999999975
No 171
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=99.98 E-value=9.7e-33 Score=305.71 Aligned_cols=200 Identities=27% Similarity=0.402 Sum_probs=172.3
Q ss_pred HHHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCC-cccchhhhHHHHHHhhcCCCccceeeceeecCCeEEEEEEe
Q 003385 601 ATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 678 (824)
Q Consensus 601 ~~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~ 678 (824)
..|.+.+.||+|+||.||+|++. +++.||+|+++... ....+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 112 (360)
T 3eqc_A 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 112 (360)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEEC
Confidence 34566789999999999999986 68899999997553 23346788999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccccCCC
Q 003385 679 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 758 (824)
Q Consensus 679 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~ 758 (824)
+++++|.+++.. ...+++..+..++.|++.||.|||+.+ +|+||||||+|||++.++.+||+|||++......
T Consensus 113 ~~~~~L~~~l~~----~~~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~- 185 (360)
T 3eqc_A 113 MDGGSLDQVLKK----AGRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS- 185 (360)
T ss_dssp CTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH-
T ss_pred CCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEECCCCcccccc-
Confidence 999999999853 346888999999999999999999831 7999999999999999999999999998754322
Q ss_pred CceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCCCc
Q 003385 759 SHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEK 809 (824)
Q Consensus 759 ~~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~~~ 809 (824)
......||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 186 --~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 234 (360)
T 3eqc_A 186 --MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPD 234 (360)
T ss_dssp --C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCC
T ss_pred --cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 1233468999999999999999999999999999999999999997543
No 172
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=99.98 E-value=2.3e-32 Score=296.25 Aligned_cols=197 Identities=30% Similarity=0.515 Sum_probs=161.7
Q ss_pred HHHhhccccccCcEEEEEEEEcCCcEEEEEEeccCCcccchhhhHHHHHHhhcCCCccceeeceeecCCeEEEEEEecCC
Q 003385 602 TKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 681 (824)
Q Consensus 602 ~~~i~~~LG~G~fg~Vy~a~~~~g~~vAVK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~~~ 681 (824)
.+.+.+.||+|+||.||+|++. ++.||||++... ...+.+.+|++++++++||||+++++++.+ ..++||||+++
T Consensus 9 ~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~~~~ 83 (307)
T 2eva_A 9 EIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYAEG 83 (307)
T ss_dssp GEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEECCTT
T ss_pred HeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEcCCC
Confidence 3456789999999999999986 789999998643 235678899999999999999999999874 36899999999
Q ss_pred CCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCc-EEEEecCCcccccCCCCc
Q 003385 682 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMR-AKVSDFGLSKFAVDGASH 760 (824)
Q Consensus 682 gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~-vkL~DFGla~~~~~~~~~ 760 (824)
|+|.+++... .....+++..++.++.|+++||+|||+.+..+|+||||||+|||++.++. +||+|||++......
T Consensus 84 ~~L~~~l~~~-~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~--- 159 (307)
T 2eva_A 84 GSLYNVLHGA-EPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH--- 159 (307)
T ss_dssp CBHHHHHHCS-SSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC----------
T ss_pred CCHHHHHhcc-CCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc---
Confidence 9999998643 22335788899999999999999999932228999999999999998876 799999998754322
Q ss_pred eeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCCC
Q 003385 761 VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNE 808 (824)
Q Consensus 761 ~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~~ 808 (824)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 160 -~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~ 206 (307)
T 2eva_A 160 -MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEI 206 (307)
T ss_dssp ------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTT
T ss_pred -cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhh
Confidence 12335899999999999999999999999999999999999999753
No 173
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=99.98 E-value=2.1e-32 Score=303.13 Aligned_cols=209 Identities=23% Similarity=0.339 Sum_probs=167.8
Q ss_pred HHHhhccccccCcEEEEEEEEcCCcEEEEEEeccCCccc-----------chhhhHHHHHHhhcCCCccceeeceee---
Q 003385 602 TKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQG-----------KREFTNEVTLLSRIHHRNLVQFLGYCQ--- 667 (824)
Q Consensus 602 ~~~i~~~LG~G~fg~Vy~a~~~~g~~vAVK~l~~~~~~~-----------~~~~~~Ei~il~~l~HpnIv~l~~~~~--- 667 (824)
.|.+.+.||+|+||.||+|...+++.||||++....... .+.+.+|++++++++||||+++++++.
T Consensus 23 ~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 102 (362)
T 3pg1_A 23 PYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFE 102 (362)
T ss_dssp SCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEEECC
T ss_pred ceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEEecc
Confidence 456678999999999999998889999999986432221 256889999999999999999999984
Q ss_pred --cCCeEEEEEEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEE
Q 003385 668 --EEGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKV 745 (824)
Q Consensus 668 --~~~~~~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL 745 (824)
.....++||||++ |+|.+.+.. ....+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||
T Consensus 103 ~~~~~~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl 175 (362)
T 3pg1_A 103 EPAMHKLYLVTELMR-TDLAQVIHD---QRIVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNILLADNNDITI 175 (362)
T ss_dssp TTTCCEEEEEEECCS-EEHHHHHHC---TTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEE
T ss_pred CCCcceEEEEEccCC-CCHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHHEEEcCCCCEEE
Confidence 3446899999998 688887753 244688999999999999999999998 9999999999999999999999
Q ss_pred EecCCcccccCCCCceeccccCCCCCcchhcccc-CCCCchHHHHHHHHHHHHHHcCCCCCCCCccccchhcHhh
Q 003385 746 SDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQ 819 (824)
Q Consensus 746 ~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~~DIwSlGvil~elltG~~Pf~~~~~~~~~~~iv~ 819 (824)
+|||+++...... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+....+...++++
T Consensus 176 ~Dfg~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~ 248 (362)
T 3pg1_A 176 CDFNLAREDTADA--NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVE 248 (362)
T ss_dssp CCTTC-----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH
T ss_pred EecCccccccccc--ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 9999997543322 2233568999999999876 6789999999999999999999999998775555555544
No 174
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=99.98 E-value=7.9e-33 Score=307.91 Aligned_cols=204 Identities=25% Similarity=0.383 Sum_probs=156.2
Q ss_pred HHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccC--CcccchhhhHHHHHHhhcCCCccceeeceeecC------CeE
Q 003385 602 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSN--SYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEE------GRS 672 (824)
Q Consensus 602 ~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~--~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~------~~~ 672 (824)
+|.+.+.||+|+||.||+|.+. +|+.||||++... .....+.+.+|+++++.++||||+++++++... ...
T Consensus 30 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~ 109 (367)
T 2fst_X 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDV 109 (367)
T ss_dssp TEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCC
T ss_pred ceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCeE
Confidence 4567789999999999999875 6889999998653 223346788999999999999999999998653 567
Q ss_pred EEEEEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcc
Q 003385 673 VLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSK 752 (824)
Q Consensus 673 ~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~ 752 (824)
++|+|++ +++|.+++. ...+++..+..++.||+.||.|||+. ||+||||||+|||++.++.+||+|||+++
T Consensus 110 ~lv~e~~-~~~L~~~~~-----~~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DFG~a~ 180 (367)
T 2fst_X 110 YLVTHLM-GADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 180 (367)
T ss_dssp EEEEECC-CEECC----------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC-----
T ss_pred EEEeccc-CCCHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeeccccc
Confidence 9999999 678888774 24688999999999999999999998 99999999999999999999999999997
Q ss_pred cccCCCCceeccccCCCCCcchhcccc-CCCCchHHHHHHHHHHHHHHcCCCCCCCCccccchhcHh
Q 003385 753 FAVDGASHVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIV 818 (824)
Q Consensus 753 ~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~~DIwSlGvil~elltG~~Pf~~~~~~~~~~~iv 818 (824)
..... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+....+....|+
T Consensus 181 ~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~ 243 (367)
T 2fst_X 181 HTADE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 243 (367)
T ss_dssp --------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH
T ss_pred ccccc----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 65322 233468999999999887 678999999999999999999999998866444444443
No 175
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=99.98 E-value=2.3e-32 Score=297.74 Aligned_cols=197 Identities=30% Similarity=0.493 Sum_probs=169.6
Q ss_pred HHhhccccccCcEEEEEEEEc-----CCcEEEEEEeccCCc-ccchhhhHHHHHHhhcCCCccceeeceeec--CCeEEE
Q 003385 603 KMLEKKIGSGGFGVVYYGKLK-----DGKEIAVKVLTSNSY-QGKREFTNEVTLLSRIHHRNLVQFLGYCQE--EGRSVL 674 (824)
Q Consensus 603 ~~i~~~LG~G~fg~Vy~a~~~-----~g~~vAVK~l~~~~~-~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~--~~~~~l 674 (824)
+.+.+.||+|+||.||++.++ +++.||||+++.... ...+.+.+|++++++++||||+++++++.+ ....++
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 367899999999999998753 678899999976532 335668999999999999999999999987 467899
Q ss_pred EEEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccc
Q 003385 675 VYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFA 754 (824)
Q Consensus 675 V~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~ 754 (824)
||||+++|+|.+++.. ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 113 v~e~~~~~~L~~~l~~-----~~~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~ 184 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLPR-----HSIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAV 184 (318)
T ss_dssp EECCCTTCBHHHHGGG-----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred EEecccCCcHHHHHhh-----CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCccccccc
Confidence 9999999999999843 3488999999999999999999998 9999999999999999999999999999866
Q ss_pred cCCCCc--eeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCC
Q 003385 755 VDGASH--VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISN 807 (824)
Q Consensus 755 ~~~~~~--~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~ 807 (824)
...... ......+|..|+|||.+.+..++.++|||||||++|||++|+.||..
T Consensus 185 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~ 239 (318)
T 3lxp_A 185 PEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQS 239 (318)
T ss_dssp CTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGS
T ss_pred cccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccc
Confidence 543322 22334578899999999999999999999999999999999999865
No 176
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=99.98 E-value=1.1e-32 Score=291.66 Aligned_cols=196 Identities=24% Similarity=0.373 Sum_probs=167.8
Q ss_pred HHHhhccccccCcEEEEEEEEcCCcEEEEEEeccCC--cccchhhhHHHHHHhhcCCCccceeeceeecC--CeEEEEEE
Q 003385 602 TKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEE--GRSVLVYE 677 (824)
Q Consensus 602 ~~~i~~~LG~G~fg~Vy~a~~~~g~~vAVK~l~~~~--~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~--~~~~lV~E 677 (824)
.|.+.+.||+|+||.||+|+++ ++.||||+++... ....+.+.+|++++++++||||+++++++.+. +..++|||
T Consensus 11 ~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e 89 (271)
T 3kmu_A 11 QLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITH 89 (271)
T ss_dssp GCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEEE
T ss_pred HhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeeec
Confidence 3556789999999999999986 8899999997543 23345789999999999999999999999876 77899999
Q ss_pred ecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCC--eEecCCCCCCEEEcCCCcEEEEecCCccccc
Q 003385 678 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPA--IIHRDLKSSNILLDKHMRAKVSDFGLSKFAV 755 (824)
Q Consensus 678 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~g--IvHrDLkp~NILl~~~~~vkL~DFGla~~~~ 755 (824)
|+++|+|.+++... ....+++..+..++.|++.||+|||++ + |+||||||+||+++.++.++|+|||++....
T Consensus 90 ~~~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~ 164 (271)
T 3kmu_A 90 WMPYGSLYNVLHEG--TNFVVDQSQAVKFALDMARGMAFLHTL---EPLIPRHALNSRSVMIDEDMTARISMADVKFSFQ 164 (271)
T ss_dssp CCTTCBHHHHHHSC--SSCCCCHHHHHHHHHHHHHHHHHHTTS---SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTS
T ss_pred ccCCCcHHHHHhhc--ccCCCCHHHHHHHHHHHHHHHHHHhcC---CCceecCCCccceEEEcCCcceeEEeccceeeec
Confidence 99999999999642 233589999999999999999999997 7 9999999999999999999999998865432
Q ss_pred CCCCceeccccCCCCCcchhccccCCCCc---hHHHHHHHHHHHHHHcCCCCCCCCc
Q 003385 756 DGASHVSSIVRGTVGYLDPEYYISQQLTD---KSDVYSFGVILLELISGQEAISNEK 809 (824)
Q Consensus 756 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~---~~DIwSlGvil~elltG~~Pf~~~~ 809 (824)
. ....||+.|+|||.+.+..++. ++|||||||++|||++|+.||.+..
T Consensus 165 ~------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~ 215 (271)
T 3kmu_A 165 S------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLS 215 (271)
T ss_dssp C------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSC
T ss_pred c------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccC
Confidence 1 2245899999999998765544 8999999999999999999997644
No 177
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.98 E-value=3.9e-32 Score=291.00 Aligned_cols=196 Identities=30% Similarity=0.501 Sum_probs=168.3
Q ss_pred ccccccCcEEEEEEEEc---CCcEEEEEEeccCC-cccchhhhHHHHHHhhcCCCccceeeceeecCCeEEEEEEecCCC
Q 003385 607 KKIGSGGFGVVYYGKLK---DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNG 682 (824)
Q Consensus 607 ~~LG~G~fg~Vy~a~~~---~g~~vAVK~l~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~~~g 682 (824)
+.||+|+||.||+|.+. +++.||||+++... ....+.+.+|++++++++||||+++++++ ..+..++||||++++
T Consensus 16 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~~ 94 (287)
T 1u59_A 16 IELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGG 94 (287)
T ss_dssp EEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEEEECCTTE
T ss_pred ccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEEEEeCCCC
Confidence 48999999999999864 57889999997643 23456788999999999999999999999 455689999999999
Q ss_pred CHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccccCCCCce-
Q 003385 683 TLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV- 761 (824)
Q Consensus 683 sL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~~~~- 761 (824)
+|.+++.. ....+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++.........
T Consensus 95 ~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~ 168 (287)
T 1u59_A 95 PLHKFLVG---KREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYT 168 (287)
T ss_dssp EHHHHHTT---CTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEEC
T ss_pred CHHHHHHh---CCccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcccceeeeccCcceee
Confidence 99999853 245688999999999999999999998 99999999999999999999999999998664333221
Q ss_pred -eccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHc-CCCCCCCCc
Q 003385 762 -SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEK 809 (824)
Q Consensus 762 -~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~ellt-G~~Pf~~~~ 809 (824)
.....+|+.|+|||.+....++.++|||||||++|||++ |+.||.+..
T Consensus 169 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~ 218 (287)
T 1u59_A 169 ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMK 218 (287)
T ss_dssp CCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCC
T ss_pred ccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCC
Confidence 222346889999999998899999999999999999998 999997644
No 178
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=99.98 E-value=7e-32 Score=294.70 Aligned_cols=192 Identities=21% Similarity=0.401 Sum_probs=167.1
Q ss_pred HHHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCCcccchhhhHHHHHHhhcC-CCccceeeceeec--CCeEEEEE
Q 003385 601 ATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIH-HRNLVQFLGYCQE--EGRSVLVY 676 (824)
Q Consensus 601 ~~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~--~~~~~lV~ 676 (824)
..|.+.+.||+|+||.||+|++. +++.||||+++.. ..+.+.+|++++++++ ||||+++++++.+ ....++||
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~ 112 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF 112 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEE
Confidence 35667899999999999999874 6889999998643 3467889999999997 9999999999987 66789999
Q ss_pred EecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCC-cEEEEecCCccccc
Q 003385 677 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHM-RAKVSDFGLSKFAV 755 (824)
Q Consensus 677 E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~-~vkL~DFGla~~~~ 755 (824)
||+++++|.+++. .+++..+..++.|++.||+|||++ +|+||||||+|||++.++ .+||+|||+++...
T Consensus 113 e~~~~~~l~~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~ 182 (330)
T 3nsz_A 113 EHVNNTDFKQLYQ-------TLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH 182 (330)
T ss_dssp ECCCCCCHHHHGG-------GCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred eccCchhHHHHHH-------hCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcC
Confidence 9999999998873 377888999999999999999998 999999999999999776 89999999998654
Q ss_pred CCCCceeccccCCCCCcchhcccc-CCCCchHHHHHHHHHHHHHHcCCCCCCC
Q 003385 756 DGASHVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISN 807 (824)
Q Consensus 756 ~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~~DIwSlGvil~elltG~~Pf~~ 807 (824)
.... .....||+.|+|||.+.. ..++.++|||||||++|||++|+.||..
T Consensus 183 ~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~ 233 (330)
T 3nsz_A 183 PGQE--YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFH 233 (330)
T ss_dssp TTCC--CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSC
T ss_pred CCCc--cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCccc
Confidence 4322 234568999999999887 6789999999999999999999999943
No 179
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=99.98 E-value=2.1e-32 Score=298.95 Aligned_cols=203 Identities=32% Similarity=0.526 Sum_probs=169.0
Q ss_pred HHHhhccccccCcEEEEEEEEc-CCcE--EEEEEeccC-CcccchhhhHHHHHHhhc-CCCccceeeceeecCCeEEEEE
Q 003385 602 TKMLEKKIGSGGFGVVYYGKLK-DGKE--IAVKVLTSN-SYQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVY 676 (824)
Q Consensus 602 ~~~i~~~LG~G~fg~Vy~a~~~-~g~~--vAVK~l~~~-~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~lV~ 676 (824)
.|.+.+.||+|+||.||+|+++ +++. +|+|+++.. .....+.+.+|+++++++ +||||+++++++.+.+..++||
T Consensus 26 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~ 105 (327)
T 1fvr_A 26 DIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAI 105 (327)
T ss_dssp GCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEE
T ss_pred HccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEEE
Confidence 4557789999999999999875 4554 499988753 233456788999999999 8999999999999999999999
Q ss_pred EecCCCCHHHHhhccc------------CccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEE
Q 003385 677 EFMHNGTLKEHLYGTL------------THEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAK 744 (824)
Q Consensus 677 E~~~~gsL~~~L~~~~------------~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vk 744 (824)
||+++++|.+++.... .....+++..++.++.|++.||.|||++ +|+||||||+|||++.++.+|
T Consensus 106 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~k 182 (327)
T 1fvr_A 106 EYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAK 182 (327)
T ss_dssp CCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEE
T ss_pred ecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEcCCCeEE
Confidence 9999999999986532 2235689999999999999999999998 999999999999999999999
Q ss_pred EEecCCcccccCCCCceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHc-CCCCCCCCc
Q 003385 745 VSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEK 809 (824)
Q Consensus 745 L~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~ellt-G~~Pf~~~~ 809 (824)
|+|||+++...... ......+++.|+|||.+....++.++|||||||++|||++ |+.||.+..
T Consensus 183 L~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~ 246 (327)
T 1fvr_A 183 IADFGLSRGQEVYV--KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT 246 (327)
T ss_dssp ECCTTCEESSCEEC--CC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCC
T ss_pred EcccCcCccccccc--cccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCc
Confidence 99999987432211 1223347889999999998889999999999999999998 999997654
No 180
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=99.98 E-value=4.7e-33 Score=298.63 Aligned_cols=203 Identities=37% Similarity=0.621 Sum_probs=160.5
Q ss_pred HHHHHHHHhhccccccCcEEEEEEEEcCCcEEEEEEeccCCc--ccchhhhHHHHHHhhcCCCccceeeceeecCCeEEE
Q 003385 597 DIEDATKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSY--QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVL 674 (824)
Q Consensus 597 ~~~~~~~~i~~~LG~G~fg~Vy~a~~~~g~~vAVK~l~~~~~--~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~l 674 (824)
|+....|.+.+.||+|+||.||+|++. ..||||+++.... ...+.+.+|++++++++||||+++++++. ....++
T Consensus 20 ei~~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~l 96 (289)
T 3og7_A 20 EIPDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-APQLAI 96 (289)
T ss_dssp BCCTTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEE
T ss_pred ccCccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeecc-CCccEE
Confidence 444556778899999999999999865 4699999975432 23467889999999999999999999764 456799
Q ss_pred EEEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccc
Q 003385 675 VYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFA 754 (824)
Q Consensus 675 V~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~ 754 (824)
||||+++++|.+++.. ....+++..++.++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 97 v~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~ 170 (289)
T 3og7_A 97 VTQWCEGSSLYHHLHA---SETKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEK 170 (289)
T ss_dssp EEECCCEEEHHHHHTT---C---CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC-----
T ss_pred EEEecCCCcHHHHHhh---ccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceecccc
Confidence 9999999999998853 245688999999999999999999998 9999999999999999999999999998754
Q ss_pred cCCC-CceeccccCCCCCcchhccc---cCCCCchHHHHHHHHHHHHHHcCCCCCCCC
Q 003385 755 VDGA-SHVSSIVRGTVGYLDPEYYI---SQQLTDKSDVYSFGVILLELISGQEAISNE 808 (824)
Q Consensus 755 ~~~~-~~~~~~~~gt~~y~aPE~l~---~~~~~~~~DIwSlGvil~elltG~~Pf~~~ 808 (824)
.... ........||+.|+|||.+. ...++.++|||||||++|||++|+.||.+.
T Consensus 171 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~ 228 (289)
T 3og7_A 171 SRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNI 228 (289)
T ss_dssp -------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSC
T ss_pred ccccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCcccc
Confidence 3321 22223456899999999986 567888999999999999999999999763
No 181
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=99.98 E-value=7.9e-32 Score=289.22 Aligned_cols=198 Identities=25% Similarity=0.403 Sum_probs=168.4
Q ss_pred HHHhhccccccCcEEEEEEEE-cCCcEEEEEEeccCCcccchhhhHHHHHHhhcCCCccceeecee-ecCCeEEEEEEec
Q 003385 602 TKMLEKKIGSGGFGVVYYGKL-KDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYC-QEEGRSVLVYEFM 679 (824)
Q Consensus 602 ~~~i~~~LG~G~fg~Vy~a~~-~~g~~vAVK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~-~~~~~~~lV~E~~ 679 (824)
.|.+.+.||+|+||.||+|++ .+++.||||++.... ..+.+.+|++++++++|++++..+..+ .+.+..++||||+
T Consensus 10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~ 87 (296)
T 3uzp_A 10 RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL 87 (296)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS--SCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred EEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc--chhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEec
Confidence 355678999999999999997 478999999986543 245688999999999998877766655 5667889999999
Q ss_pred CCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEc---CCCcEEEEecCCcccccC
Q 003385 680 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLD---KHMRAKVSDFGLSKFAVD 756 (824)
Q Consensus 680 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~---~~~~vkL~DFGla~~~~~ 756 (824)
+++|.+++... ...+++..+..++.|++.||+|||++ +|+||||||+|||++ .++.+||+|||+++....
T Consensus 88 -~~~L~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~ 160 (296)
T 3uzp_A 88 -GPSLEDLFNFC---SRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 160 (296)
T ss_dssp -CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred -CCCHHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccc
Confidence 89999998532 34689999999999999999999998 999999999999994 789999999999986554
Q ss_pred CCCc------eeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCCC
Q 003385 757 GASH------VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNE 808 (824)
Q Consensus 757 ~~~~------~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~~ 808 (824)
.... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||.+.
T Consensus 161 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 218 (296)
T 3uzp_A 161 ARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGL 218 (296)
T ss_dssp TTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSC
T ss_pred cccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCc
Confidence 3321 123456999999999999999999999999999999999999999864
No 182
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=99.98 E-value=8.7e-33 Score=307.73 Aligned_cols=195 Identities=11% Similarity=0.071 Sum_probs=148.4
Q ss_pred HHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCCc---ccchhhhHHHHHHhhc--CCCccceee-------ceeecC
Q 003385 603 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY---QGKREFTNEVTLLSRI--HHRNLVQFL-------GYCQEE 669 (824)
Q Consensus 603 ~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~---~~~~~~~~Ei~il~~l--~HpnIv~l~-------~~~~~~ 669 (824)
|.+.+.||+|+||.||+|++. +++.||||+++.... ...+.+.+|+++++.+ +||||++++ +++...
T Consensus 64 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~~~ 143 (371)
T 3q60_A 64 LKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAVQ 143 (371)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEEET
T ss_pred eeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehheecC
Confidence 456789999999999999976 788999999986542 2345677885555555 699988755 333222
Q ss_pred -----------------CeEEEEEEecCCCCHHHHhhcccCccccCCHHHH------HHHHHHHHHHHHHHHhCCCCCeE
Q 003385 670 -----------------GRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKR------LEIAEDAAKGIEYLHTGCVPAII 726 (824)
Q Consensus 670 -----------------~~~~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~------~~i~~qia~gL~yLH~~~~~gIv 726 (824)
...++||||++ |+|.+++... ...+.+..+ ..++.||+.||+|||++ +|+
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~---~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~---~iv 216 (371)
T 3q60_A 144 SQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTL---DFVYVFRGDEGILALHILTAQLIRLAANLQSK---GLV 216 (371)
T ss_dssp TSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHH---HHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHT---TEE
T ss_pred CCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHh---ccccchhhhhhhhhHHHHHHHHHHHHHHHHHC---CCc
Confidence 34799999999 8999999643 122333444 67789999999999998 999
Q ss_pred ecCCCCCCEEEcCCCcEEEEecCCcccccCCCCceeccccCCCCCcchhcccc--CCCCchHHHHHHHHHHHHHHcCCCC
Q 003385 727 HRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYIS--QQLTDKSDVYSFGVILLELISGQEA 804 (824)
Q Consensus 727 HrDLkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~l~~--~~~~~~~DIwSlGvil~elltG~~P 804 (824)
||||||+|||++.++.+||+|||+++.... ......+|+.|+|||++.+ ..++.++|||||||++|||++|+.|
T Consensus 217 HrDikp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~P 292 (371)
T 3q60_A 217 HGHFTPDNLFIMPDGRLMLGDVSALWKVGT----RGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLP 292 (371)
T ss_dssp ETTCSGGGEEECTTSCEEECCGGGEEETTC----EEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCS
T ss_pred cCcCCHHHEEECCCCCEEEEecceeeecCC----CccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCC
Confidence 999999999999999999999999986532 1213447799999999987 6799999999999999999999999
Q ss_pred CCCC
Q 003385 805 ISNE 808 (824)
Q Consensus 805 f~~~ 808 (824)
|.+.
T Consensus 293 f~~~ 296 (371)
T 3q60_A 293 FGLV 296 (371)
T ss_dssp TTBC
T ss_pred CCCc
Confidence 9876
No 183
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=99.98 E-value=9.8e-33 Score=300.40 Aligned_cols=207 Identities=25% Similarity=0.443 Sum_probs=174.1
Q ss_pred HHHHHhhccccccCcEEEEEEEEc------CCcEEEEEEeccCCc-ccchhhhHHHHHHhhcCCCccceeeceeecCCeE
Q 003385 600 DATKMLEKKIGSGGFGVVYYGKLK------DGKEIAVKVLTSNSY-QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRS 672 (824)
Q Consensus 600 ~~~~~i~~~LG~G~fg~Vy~a~~~------~g~~vAVK~l~~~~~-~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ 672 (824)
...|.+.+.||+|+||.||+|++. .++.||||++..... .....+.+|++++++++||||+++++++.+.+..
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 103 (322)
T 1p4o_A 24 REKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPT 103 (322)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSC
T ss_pred hhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCcc
Confidence 345677899999999999999765 367899999975432 2345688999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHhhcccC------ccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEE
Q 003385 673 VLVYEFMHNGTLKEHLYGTLT------HEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVS 746 (824)
Q Consensus 673 ~lV~E~~~~gsL~~~L~~~~~------~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~ 746 (824)
++||||+++|+|.+++..... ....+++..++.++.|++.||.|||++ +|+||||||+||+++.++.+||+
T Consensus 104 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIli~~~~~~kl~ 180 (322)
T 1p4o_A 104 LVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIG 180 (322)
T ss_dssp EEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEECTTCCEEEC
T ss_pred EEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEEEcCCCeEEEC
Confidence 999999999999999854211 124568899999999999999999998 99999999999999999999999
Q ss_pred ecCCcccccCCCCc-eeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHc-CCCCCCCCc
Q 003385 747 DFGLSKFAVDGASH-VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEK 809 (824)
Q Consensus 747 DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~ellt-G~~Pf~~~~ 809 (824)
|||+++........ ......+|+.|+|||.+.+..++.++|||||||++|||++ |+.||.+..
T Consensus 181 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~ 245 (322)
T 1p4o_A 181 DFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS 245 (322)
T ss_dssp CTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSC
T ss_pred cCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCC
Confidence 99999755432221 1223346889999999999999999999999999999999 899997644
No 184
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=99.98 E-value=6.5e-32 Score=289.64 Aligned_cols=200 Identities=25% Similarity=0.396 Sum_probs=168.0
Q ss_pred HHHHhhccccccCcEEEEEEEE-cCCcEEEEEEeccCCcccchhhhHHHHHHhhcCCCccceeecee-ecCCeEEEEEEe
Q 003385 601 ATKMLEKKIGSGGFGVVYYGKL-KDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYC-QEEGRSVLVYEF 678 (824)
Q Consensus 601 ~~~~i~~~LG~G~fg~Vy~a~~-~~g~~vAVK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~-~~~~~~~lV~E~ 678 (824)
..|.+.+.||+|+||.||+|++ .+++.||||++.... ..+.+.+|++++++++|++++..++.+ .+.+..++||||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~ 86 (296)
T 4hgt_A 9 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMEL 86 (296)
T ss_dssp --CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred CceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccc--cchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEc
Confidence 4577889999999999999987 478899999875433 245688999999999988877777665 667788999999
Q ss_pred cCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEE---cCCCcEEEEecCCccccc
Q 003385 679 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILL---DKHMRAKVSDFGLSKFAV 755 (824)
Q Consensus 679 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl---~~~~~vkL~DFGla~~~~ 755 (824)
+ +++|.+++... ...+++..+..++.|++.||.|||++ +|+||||||+|||+ +.++.+||+|||+++...
T Consensus 87 ~-~~~L~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~ 159 (296)
T 4hgt_A 87 L-GPSLEDLFNFC---SRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR 159 (296)
T ss_dssp C-CCBHHHHHHHT---TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred c-CCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecCccceecc
Confidence 9 99999988532 34589999999999999999999998 99999999999999 788999999999998654
Q ss_pred CCCC------ceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCCCc
Q 003385 756 DGAS------HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEK 809 (824)
Q Consensus 756 ~~~~------~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~~~ 809 (824)
.... .......||+.|+|||.+.+..++.++|||||||++|||++|+.||.+..
T Consensus 160 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 219 (296)
T 4hgt_A 160 DARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLK 219 (296)
T ss_dssp CTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCC
T ss_pred CcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccc
Confidence 4322 12234569999999999999999999999999999999999999998643
No 185
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=99.98 E-value=1.5e-32 Score=297.82 Aligned_cols=207 Identities=30% Similarity=0.467 Sum_probs=173.8
Q ss_pred HHHHHhhccccccCcEEEEEEEEc------CCcEEEEEEeccCCc-ccchhhhHHHHHHhhc-CCCccceeeceeecCC-
Q 003385 600 DATKMLEKKIGSGGFGVVYYGKLK------DGKEIAVKVLTSNSY-QGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEG- 670 (824)
Q Consensus 600 ~~~~~i~~~LG~G~fg~Vy~a~~~------~g~~vAVK~l~~~~~-~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~- 670 (824)
...|.+.+.||+|+||.||+|++. +++.||||+++.... ...+.+.+|+++++++ +||||+++++++...+
T Consensus 26 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~ 105 (316)
T 2xir_A 26 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 105 (316)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTS
T ss_pred hhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCC
Confidence 445677899999999999999852 467899999975432 2345788999999999 7999999999987654
Q ss_pred eEEEEEEecCCCCHHHHhhcccCc------------cccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEc
Q 003385 671 RSVLVYEFMHNGTLKEHLYGTLTH------------EQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLD 738 (824)
Q Consensus 671 ~~~lV~E~~~~gsL~~~L~~~~~~------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~ 738 (824)
..++||||+++++|.+++...... ...+++..+..++.|++.||.|||++ +|+||||||+||+++
T Consensus 106 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~ 182 (316)
T 2xir_A 106 PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLS 182 (316)
T ss_dssp CCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEC
T ss_pred ceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEEC
Confidence 589999999999999999654321 12378899999999999999999998 999999999999999
Q ss_pred CCCcEEEEecCCcccccCCCC-ceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHc-CCCCCCCCc
Q 003385 739 KHMRAKVSDFGLSKFAVDGAS-HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEK 809 (824)
Q Consensus 739 ~~~~vkL~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~ellt-G~~Pf~~~~ 809 (824)
.++.+||+|||+++....... .......||+.|+|||++.+..++.++|||||||++|||++ |+.||.+..
T Consensus 183 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~ 255 (316)
T 2xir_A 183 EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK 255 (316)
T ss_dssp GGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred CCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccc
Confidence 999999999999976544322 22334557899999999999999999999999999999998 999997754
No 186
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=99.98 E-value=2e-32 Score=291.03 Aligned_cols=199 Identities=28% Similarity=0.495 Sum_probs=165.0
Q ss_pred HHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCC---cccchhhhHHHHHHhhcCCCccceeeceeecCCeEEEEEE
Q 003385 602 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYE 677 (824)
Q Consensus 602 ~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~---~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E 677 (824)
.|.+.+.||+|+||.||+|+++ +++.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 12 ~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 91 (276)
T 2h6d_A 12 HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVME 91 (276)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred cEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEEe
Confidence 4567789999999999999987 78999999986532 1224568899999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccccCC
Q 003385 678 FMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG 757 (824)
Q Consensus 678 ~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~~~ 757 (824)
|+++++|.+++.. ...+++..+..++.|++.||.|||++ +|+||||||+||+++.++.+||+|||++......
T Consensus 92 ~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~ 164 (276)
T 2h6d_A 92 YVSGGELFDYICK----HGRVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG 164 (276)
T ss_dssp CCCSCBHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC-
T ss_pred ccCCCcHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeecccccccCCC
Confidence 9999999999853 34578899999999999999999998 9999999999999999999999999998765432
Q ss_pred CCceeccccCCCCCcchhccccCCC-CchHHHHHHHHHHHHHHcCCCCCCCCc
Q 003385 758 ASHVSSIVRGTVGYLDPEYYISQQL-TDKSDVYSFGVILLELISGQEAISNEK 809 (824)
Q Consensus 758 ~~~~~~~~~gt~~y~aPE~l~~~~~-~~~~DIwSlGvil~elltG~~Pf~~~~ 809 (824)
. ......|++.|+|||.+.+..+ +.++||||||+++|||++|+.||....
T Consensus 165 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~ 215 (276)
T 2h6d_A 165 E--FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEH 215 (276)
T ss_dssp --------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred c--ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCc
Confidence 2 2233468999999999987765 579999999999999999999998654
No 187
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=99.98 E-value=3.1e-32 Score=309.55 Aligned_cols=207 Identities=25% Similarity=0.331 Sum_probs=174.6
Q ss_pred HHHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCCcccchhhhHHHHHHhhc------CCCccceeeceeecCCeEE
Q 003385 601 ATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRI------HHRNLVQFLGYCQEEGRSV 673 (824)
Q Consensus 601 ~~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~~~~~~~~~Ei~il~~l------~HpnIv~l~~~~~~~~~~~ 673 (824)
.+|.+.+.||+|+||.||+|.+. +++.||||+++... ...+.+.+|+++++.+ +|+||+++++++...+..+
T Consensus 97 ~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~ 175 (429)
T 3kvw_A 97 YRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHIC 175 (429)
T ss_dssp TTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEE
T ss_pred CcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc-chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEE
Confidence 35677899999999999999876 58899999997532 2345677888888887 5779999999999999999
Q ss_pred EEEEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCc--EEEEecCCc
Q 003385 674 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMR--AKVSDFGLS 751 (824)
Q Consensus 674 lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~--vkL~DFGla 751 (824)
+||||+. ++|.+++... ....+++..+..++.||+.||+|||++ +|+||||||+|||++.++. +||+|||++
T Consensus 176 lv~e~~~-~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL~DFG~a 249 (429)
T 3kvw_A 176 MTFELLS-MNLYELIKKN--KFQGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDFGSS 249 (429)
T ss_dssp EEECCCC-CBHHHHHHHT--TTCCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEECCCTTC
T ss_pred EEEeccC-CCHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEEeecccc
Confidence 9999996 6898888543 234588999999999999999999998 9999999999999999887 999999999
Q ss_pred ccccCCCCceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCCCccccchhcHh
Q 003385 752 KFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIV 818 (824)
Q Consensus 752 ~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~~~~~~~~~~iv 818 (824)
+..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||.+....+....++
T Consensus 250 ~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~ 312 (429)
T 3kvw_A 250 CYEHQR----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMI 312 (429)
T ss_dssp EETTCC----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred eecCCc----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 754322 233568999999999999999999999999999999999999998876544444443
No 188
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=99.98 E-value=5.5e-32 Score=288.44 Aligned_cols=200 Identities=31% Similarity=0.500 Sum_probs=173.1
Q ss_pred HHHHHHHHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCCcccchhhhHHHHHHhhcCCCccceeeceeec------
Q 003385 596 SDIEDATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQE------ 668 (824)
Q Consensus 596 ~~~~~~~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~------ 668 (824)
.+.....|.+.+.||+|+||.||+|++. +++.||+|+++.. .+.+.+|++++++++||||+++++++..
T Consensus 6 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (284)
T 2a19_B 6 DKRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYN----NEKAEREVKALAKLDHVNIVHYNGCWDGFDYDPE 81 (284)
T ss_dssp CHHHHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECC----SGGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC--
T ss_pred cchhccccceeeeeccCCceEEEEEEEcCCCeEEEEEEeccc----cHHHHHHHHHHHhCCCCCEEEEeeeEeccccCcc
Confidence 3445567778899999999999999987 7899999998753 3567899999999999999999998754
Q ss_pred ----------CCeEEEEEEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEc
Q 003385 669 ----------EGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLD 738 (824)
Q Consensus 669 ----------~~~~~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~ 738 (824)
....++||||+++++|.+++... ....+++..+..++.|++.||.|||++ +|+||||||+||+++
T Consensus 82 ~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~ 156 (284)
T 2a19_B 82 TSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR--RGEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLV 156 (284)
T ss_dssp -------CCEEEEEEEEECCCCSCBHHHHHHHG--GGSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEE
T ss_pred cccccccccCcceEEEEEeccCCCCHHHHHhhc--cCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEc
Confidence 44579999999999999998543 235688999999999999999999998 999999999999999
Q ss_pred CCCcEEEEecCCcccccCCCCceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCC
Q 003385 739 KHMRAKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAIS 806 (824)
Q Consensus 739 ~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~ 806 (824)
.++.+||+|||+++....... .....||+.|+|||.+.+..++.++|||||||++|||++|..|+.
T Consensus 157 ~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~ 222 (284)
T 2a19_B 157 DTKQVKIGDFGLVTSLKNDGK--RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAF 222 (284)
T ss_dssp ETTEEEECCCTTCEESSCCSC--CCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHH
T ss_pred CCCCEEECcchhheecccccc--ccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcch
Confidence 999999999999876544322 233458999999999999999999999999999999999998874
No 189
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=99.98 E-value=3.4e-32 Score=292.71 Aligned_cols=203 Identities=25% Similarity=0.398 Sum_probs=169.9
Q ss_pred HHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCCc--ccchhhhHHHHHHhhcCCCccceeeceeecCCeEEEEEEec
Q 003385 603 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY--QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 679 (824)
Q Consensus 603 ~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~--~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~ 679 (824)
|.+.+.||+|+||.||+|+.+ +++.||||+++.... ...+.+.+|++++++++||||+++++++...+..++||||+
T Consensus 5 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (299)
T 2r3i_A 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL 84 (299)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred hhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEEcc
Confidence 456789999999999999986 689999999875432 23467889999999999999999999999999999999999
Q ss_pred CCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccccCCCC
Q 003385 680 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGAS 759 (824)
Q Consensus 680 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~~ 759 (824)
+ ++|.+++... ....+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||++........
T Consensus 85 ~-~~L~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~ 158 (299)
T 2r3i_A 85 H-QDLKKFMDAS--ALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 158 (299)
T ss_dssp S-EEHHHHHHHT--TTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCSB
T ss_pred c-CCHHHHHHhh--hccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcchhhhhccCCcc
Confidence 8 6999988543 224578889999999999999999998 999999999999999999999999999876543222
Q ss_pred ceeccccCCCCCcchhccccCC-CCchHHHHHHHHHHHHHHcCCCCCCCCcccc
Q 003385 760 HVSSIVRGTVGYLDPEYYISQQ-LTDKSDVYSFGVILLELISGQEAISNEKFGA 812 (824)
Q Consensus 760 ~~~~~~~gt~~y~aPE~l~~~~-~~~~~DIwSlGvil~elltG~~Pf~~~~~~~ 812 (824)
......||+.|+|||.+.+.. ++.++|||||||++|||++|+.||.+....+
T Consensus 159 -~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~ 211 (299)
T 2r3i_A 159 -TYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 211 (299)
T ss_dssp -CTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred -ccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHH
Confidence 223345899999999988765 7899999999999999999999998765433
No 190
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=99.98 E-value=3.3e-32 Score=295.08 Aligned_cols=207 Identities=24% Similarity=0.356 Sum_probs=166.0
Q ss_pred HHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCCcccchhhhHHHHHHhhcCCCccceeeceee-------------
Q 003385 602 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQ------------- 667 (824)
Q Consensus 602 ~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~------------- 667 (824)
+|.+.+.||+|+||.||+|.+. +++.||||++........+.+.+|++++++++||||+++++++.
T Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~ 91 (320)
T 2i6l_A 12 RYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSL 91 (320)
T ss_dssp TEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----C
T ss_pred ceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccccc
Confidence 4566789999999999999987 48999999997665555677899999999999999999998873
Q ss_pred -cCCeEEEEEEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEc-CCCcEEE
Q 003385 668 -EEGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLD-KHMRAKV 745 (824)
Q Consensus 668 -~~~~~~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~-~~~~vkL 745 (824)
+.+..++||||++ |+|.+++. ...+++..+..++.|++.||+|||++ +|+||||||+||+++ +++.+||
T Consensus 92 ~~~~~~~lv~e~~~-~~L~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~kl 162 (320)
T 2i6l_A 92 TELNSVYIVQEYME-TDLANVLE-----QGPLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDLVLKI 162 (320)
T ss_dssp CSCSEEEEEEECCS-EEHHHHHT-----TCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTTEEEE
T ss_pred cccCceeEEeeccC-CCHHHHhh-----cCCccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCeEEE
Confidence 4467899999998 69999884 24578899999999999999999998 999999999999997 5679999
Q ss_pred EecCCcccccCCCC--ceeccccCCCCCcchhcccc-CCCCchHHHHHHHHHHHHHHcCCCCCCCCccccchhcH
Q 003385 746 SDFGLSKFAVDGAS--HVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNI 817 (824)
Q Consensus 746 ~DFGla~~~~~~~~--~~~~~~~gt~~y~aPE~l~~-~~~~~~~DIwSlGvil~elltG~~Pf~~~~~~~~~~~i 817 (824)
+|||+++....... .......+|..|+|||.+.. ..++.++|||||||++|||++|+.||.+....+..+.+
T Consensus 163 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~ 237 (320)
T 2i6l_A 163 GDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLI 237 (320)
T ss_dssp CCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH
T ss_pred ccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 99999986543211 11233457999999998875 67899999999999999999999999886644433333
No 191
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=99.97 E-value=5.6e-32 Score=293.31 Aligned_cols=202 Identities=25% Similarity=0.410 Sum_probs=170.7
Q ss_pred HHHHHHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCCcccchhhhHHHHHHhhcCCCccceeeceeecCCeEEEEE
Q 003385 598 IEDATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVY 676 (824)
Q Consensus 598 ~~~~~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~ 676 (824)
.....|.+.+.||+|+||.||+|.+. +|+.||||++.... ..+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 26 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 103 (314)
T 3com_A 26 QPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVM 103 (314)
T ss_dssp ----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEe
Confidence 34455667889999999999999886 58999999997543 3567889999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccccC
Q 003385 677 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVD 756 (824)
Q Consensus 677 E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~~ 756 (824)
||+++++|.+++.. ....+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 104 e~~~~~~L~~~~~~---~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~ 177 (314)
T 3com_A 104 EYCGAGSVSDIIRL---RNKTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTD 177 (314)
T ss_dssp ECCTTEEHHHHHHH---HTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECBT
T ss_pred ecCCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccchhhhh
Confidence 99999999998852 245688999999999999999999998 999999999999999999999999999976543
Q ss_pred CCCceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCCC
Q 003385 757 GASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNE 808 (824)
Q Consensus 757 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~~ 808 (824)
... ......||+.|+|||.+....++.++|||||||++|||++|+.||.+.
T Consensus 178 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 228 (314)
T 3com_A 178 TMA-KRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADI 228 (314)
T ss_dssp TBS-CBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred hcc-ccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCC
Confidence 322 223446899999999999989999999999999999999999999763
No 192
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.97 E-value=2.4e-32 Score=299.65 Aligned_cols=203 Identities=28% Similarity=0.495 Sum_probs=165.9
Q ss_pred HHHHhhccccccCcEEEEEEEEcC-----CcEEEEEEeccCCc-ccchhhhHHHHHHhhcCCCccceeeceeecCCeEEE
Q 003385 601 ATKMLEKKIGSGGFGVVYYGKLKD-----GKEIAVKVLTSNSY-QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVL 674 (824)
Q Consensus 601 ~~~~i~~~LG~G~fg~Vy~a~~~~-----g~~vAVK~l~~~~~-~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~l 674 (824)
..+.+.+.||+|+||.||+|.++. +..||||+++.... .....+.+|++++++++||||+++++++.+.+..++
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 123 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI 123 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEE
Confidence 344567899999999999998653 23599999975432 234568899999999999999999999999999999
Q ss_pred EEEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccc
Q 003385 675 VYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFA 754 (824)
Q Consensus 675 V~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~ 754 (824)
||||+++++|.+++... ...+++..++.++.|++.||.|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 124 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~ 197 (333)
T 1mqb_A 124 ITEYMENGALDKFLREK---DGEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVL 197 (333)
T ss_dssp EEECCTTEEHHHHHHHT---TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC----
T ss_pred EEeCCCCCcHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCCCcchhh
Confidence 99999999999998532 35688999999999999999999998 9999999999999999999999999999865
Q ss_pred cCCCCc--eeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHc-CCCCCCCCc
Q 003385 755 VDGASH--VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEK 809 (824)
Q Consensus 755 ~~~~~~--~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~ellt-G~~Pf~~~~ 809 (824)
...... ......+|+.|+|||.+....++.++|||||||++|||++ |+.||.+..
T Consensus 198 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~ 255 (333)
T 1mqb_A 198 EDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELS 255 (333)
T ss_dssp -------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC
T ss_pred ccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCC
Confidence 433221 1122346789999999999999999999999999999999 999997543
No 193
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=99.97 E-value=1.9e-32 Score=302.64 Aligned_cols=197 Identities=17% Similarity=0.254 Sum_probs=167.1
Q ss_pred HHHHhhccccccCcEEEEEEEEcC---------CcEEEEEEeccCCcccchhhhHHHHHHhhcCCCccce----------
Q 003385 601 ATKMLEKKIGSGGFGVVYYGKLKD---------GKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQ---------- 661 (824)
Q Consensus 601 ~~~~i~~~LG~G~fg~Vy~a~~~~---------g~~vAVK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~---------- 661 (824)
..|.+.+.||+|+||.||+|++.. ++.||||++... +.+.+|++++++++||||++
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 116 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPL 116 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTT
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCc
Confidence 356678999999999999998764 789999998643 56889999999999999998
Q ss_pred -----eeceeec-CCeEEEEEEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCE
Q 003385 662 -----FLGYCQE-EGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNI 735 (824)
Q Consensus 662 -----l~~~~~~-~~~~~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NI 735 (824)
+++++.. .+..++||||+ +++|.+++... ....+++..++.++.|++.||.|||++ +|+||||||+||
T Consensus 117 ~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NI 190 (352)
T 2jii_A 117 LAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVS--PKHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVTAENI 190 (352)
T ss_dssp CSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHS--GGGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCGGGE
T ss_pred cCccchhhccccCCcEEEEEecCC-CcCHHHHHHhC--CcCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHE
Confidence 4556654 67889999999 99999999642 246689999999999999999999998 999999999999
Q ss_pred EEcCCC--cEEEEecCCcccccCCCCc------eeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCC
Q 003385 736 LLDKHM--RAKVSDFGLSKFAVDGASH------VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISN 807 (824)
Q Consensus 736 Ll~~~~--~vkL~DFGla~~~~~~~~~------~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~ 807 (824)
|++.++ .+||+|||+++........ ......||+.|+|||.+.+..++.++|||||||++|||++|+.||.+
T Consensus 191 l~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~ 270 (352)
T 2jii_A 191 FVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTN 270 (352)
T ss_dssp EEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGG
T ss_pred EEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCccc
Confidence 999998 8999999999765432211 11334699999999999999999999999999999999999999986
Q ss_pred C
Q 003385 808 E 808 (824)
Q Consensus 808 ~ 808 (824)
.
T Consensus 271 ~ 271 (352)
T 2jii_A 271 C 271 (352)
T ss_dssp G
T ss_pred C
Confidence 4
No 194
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=99.97 E-value=3.2e-32 Score=297.43 Aligned_cols=203 Identities=27% Similarity=0.382 Sum_probs=156.2
Q ss_pred HHHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCCcccchhhhHHHHHHhhcC-CCccceeecee--------ecCC
Q 003385 601 ATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIH-HRNLVQFLGYC--------QEEG 670 (824)
Q Consensus 601 ~~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~--------~~~~ 670 (824)
.+|.+.+.||+|+||.||+|++. +++.||||++........+.+.+|+.+++++. ||||+++++++ ....
T Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~ 107 (337)
T 3ll6_A 28 LRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQA 107 (337)
T ss_dssp EEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSE
T ss_pred ceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCc
Confidence 35667899999999999999975 68999999987666555677899999999996 99999999988 3445
Q ss_pred eEEEEEEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCC--eEecCCCCCCEEEcCCCcEEEEec
Q 003385 671 RSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPA--IIHRDLKSSNILLDKHMRAKVSDF 748 (824)
Q Consensus 671 ~~~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~g--IvHrDLkp~NILl~~~~~vkL~DF 748 (824)
..++||||+. |+|.+++... .....+++..++.++.|++.||.|||+. + |+||||||+|||++.++.+||+||
T Consensus 108 ~~~lv~e~~~-g~L~~~l~~~-~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~~~kl~Df 182 (337)
T 3ll6_A 108 EFLLLTELCK-GQLVEFLKKM-ESRGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQGTIKLCDF 182 (337)
T ss_dssp EEEEEEECCS-EEHHHHHHHH-HTTCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTSCEEBCCC
T ss_pred eEEEEEEecC-CCHHHHHHHh-hccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCCCEEEecC
Confidence 6799999996 7898888542 2244689999999999999999999998 7 999999999999999999999999
Q ss_pred CCcccccCCCCc-----------eeccccCCCCCcchhcc---ccCCCCchHHHHHHHHHHHHHHcCCCCCCCC
Q 003385 749 GLSKFAVDGASH-----------VSSIVRGTVGYLDPEYY---ISQQLTDKSDVYSFGVILLELISGQEAISNE 808 (824)
Q Consensus 749 Gla~~~~~~~~~-----------~~~~~~gt~~y~aPE~l---~~~~~~~~~DIwSlGvil~elltG~~Pf~~~ 808 (824)
|+++........ ......||+.|+|||++ ....++.++|||||||++|||++|+.||.+.
T Consensus 183 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~ 256 (337)
T 3ll6_A 183 GSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDG 256 (337)
T ss_dssp TTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC---
T ss_pred ccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcch
Confidence 999865432211 11134589999999998 5667889999999999999999999999753
No 195
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.97 E-value=3.4e-32 Score=322.53 Aligned_cols=195 Identities=30% Similarity=0.504 Sum_probs=164.4
Q ss_pred cccccCcEEEEEEEEc---CCcEEEEEEeccCC-cccchhhhHHHHHHhhcCCCccceeeceeecCCeEEEEEEecCCCC
Q 003385 608 KIGSGGFGVVYYGKLK---DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNGT 683 (824)
Q Consensus 608 ~LG~G~fg~Vy~a~~~---~g~~vAVK~l~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~~~gs 683 (824)
.||+|+||.||+|.++ ++..||||+++... ....+.+.+|+++|++++||||+++++++.. +..++||||+++|+
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~ 421 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 421 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence 7999999999999875 45679999997653 2345678999999999999999999999976 56899999999999
Q ss_pred HHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccccCCCCce--
Q 003385 684 LKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHV-- 761 (824)
Q Consensus 684 L~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~~~~-- 761 (824)
|.+++... ...+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++.........
T Consensus 422 L~~~l~~~---~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~ 495 (613)
T 2ozo_A 422 LHKFLVGK---REEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTA 495 (613)
T ss_dssp HHHHHTTC---TTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC--------
T ss_pred HHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeee
Confidence 99998532 45689999999999999999999998 99999999999999999999999999998654332221
Q ss_pred eccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHc-CCCCCCCCc
Q 003385 762 SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEK 809 (824)
Q Consensus 762 ~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~ellt-G~~Pf~~~~ 809 (824)
.....+|+.|+|||++....++.++|||||||++|||++ |+.||.+..
T Consensus 496 ~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~ 544 (613)
T 2ozo_A 496 RSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMK 544 (613)
T ss_dssp ------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC
T ss_pred ccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCC
Confidence 122335689999999999999999999999999999998 999998754
No 196
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=99.97 E-value=1.6e-32 Score=297.63 Aligned_cols=208 Identities=31% Similarity=0.492 Sum_probs=163.7
Q ss_pred HHHHHHhhccccccCcEEEEEEEEc----CCcEEEEEEeccCC--cccchhhhHHHHHHhhcCCCccceeeceeecCC--
Q 003385 599 EDATKMLEKKIGSGGFGVVYYGKLK----DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEG-- 670 (824)
Q Consensus 599 ~~~~~~i~~~LG~G~fg~Vy~a~~~----~g~~vAVK~l~~~~--~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~-- 670 (824)
....|.+.+.||+|+||.||+|++. .++.||+|+++... ....+.+.+|++++++++||||+++++++.+.+
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 111 (313)
T 3brb_A 32 DRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQ 111 (313)
T ss_dssp CGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC----
T ss_pred CHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeecccc
Confidence 3445667889999999999999865 34579999987542 223456889999999999999999999987654
Q ss_pred ---eEEEEEEecCCCCHHHHhhccc--CccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEE
Q 003385 671 ---RSVLVYEFMHNGTLKEHLYGTL--THEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKV 745 (824)
Q Consensus 671 ---~~~lV~E~~~~gsL~~~L~~~~--~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL 745 (824)
..++||||+++++|.+++.... .....+++..++.++.|++.||.|||++ +|+||||||+||+++.++.+||
T Consensus 112 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kl 188 (313)
T 3brb_A 112 GIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMTVCV 188 (313)
T ss_dssp ---CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTTSCEEE
T ss_pred CCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEE
Confidence 3499999999999999984332 2345689999999999999999999998 9999999999999999999999
Q ss_pred EecCCcccccCCCC-ceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHc-CCCCCCCCc
Q 003385 746 SDFGLSKFAVDGAS-HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEK 809 (824)
Q Consensus 746 ~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~ellt-G~~Pf~~~~ 809 (824)
+|||+++....... .......+++.|+|||.+.+..++.++|||||||++|||++ |..||.+..
T Consensus 189 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~ 254 (313)
T 3brb_A 189 ADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQ 254 (313)
T ss_dssp CSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred eecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCC
Confidence 99999976543322 12233457889999999999999999999999999999999 999997654
No 197
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=99.97 E-value=4.1e-32 Score=292.13 Aligned_cols=201 Identities=31% Similarity=0.530 Sum_probs=165.3
Q ss_pred HHhhccccccCcEEEEEEEEcC----CcEEEEEEeccCC-cccchhhhHHHHHHhhcCCCccceeecee-ecCCeEEEEE
Q 003385 603 KMLEKKIGSGGFGVVYYGKLKD----GKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYC-QEEGRSVLVY 676 (824)
Q Consensus 603 ~~i~~~LG~G~fg~Vy~a~~~~----g~~vAVK~l~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~-~~~~~~~lV~ 676 (824)
|.+.+.||+|+||.||+|++.+ ...+|+|+++... ....+.+.+|++++++++||||+++++++ ...+..++||
T Consensus 27 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~ 106 (298)
T 3f66_A 27 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL 106 (298)
T ss_dssp EEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEE
T ss_pred hhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEEE
Confidence 4567899999999999998653 2358999987543 23346788999999999999999999985 4556789999
Q ss_pred EecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccccC
Q 003385 677 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVD 756 (824)
Q Consensus 677 E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~~ 756 (824)
||+++|+|.+++.. ....+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 107 e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 180 (298)
T 3f66_A 107 PYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 180 (298)
T ss_dssp ECCTTCBHHHHHHC---TTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCGGGCCCSC
T ss_pred eCCCCCCHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECcccccccccc
Confidence 99999999999853 245578899999999999999999998 999999999999999999999999999975543
Q ss_pred CCC---ceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHc-CCCCCCCCc
Q 003385 757 GAS---HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEK 809 (824)
Q Consensus 757 ~~~---~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~ellt-G~~Pf~~~~ 809 (824)
... .......+|+.|+|||.+.+..++.++||||+||++|||++ |.+||.+..
T Consensus 181 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~ 237 (298)
T 3f66_A 181 KEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN 237 (298)
T ss_dssp GGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSC
T ss_pred cchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCC
Confidence 221 12233457889999999999999999999999999999999 666676543
No 198
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=99.97 E-value=4e-32 Score=300.29 Aligned_cols=212 Identities=24% Similarity=0.338 Sum_probs=163.1
Q ss_pred HHHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCCcccchhhhHHHHHHhhcCCCccceeeceeecCCe-------E
Q 003385 601 ATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGR-------S 672 (824)
Q Consensus 601 ~~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~-------~ 672 (824)
..|.+.+.||+|+||.||+|+++ +++.||||++.... .......+|++.++.++||||+++++++...+. .
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~ 101 (360)
T 3e3p_A 23 DRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYL 101 (360)
T ss_dssp TTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEEE
T ss_pred cceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccceeE
Confidence 45677899999999999999986 68999999986543 234456678888899999999999999865333 7
Q ss_pred EEEEEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHH--hCCCCCeEecCCCCCCEEEcC-CCcEEEEecC
Q 003385 673 VLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLH--TGCVPAIIHRDLKSSNILLDK-HMRAKVSDFG 749 (824)
Q Consensus 673 ~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH--~~~~~gIvHrDLkp~NILl~~-~~~vkL~DFG 749 (824)
++||||+++ +|...+.........+++..+..++.|++.||.||| +. +|+||||||+|||++. ++.+||+|||
T Consensus 102 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~~~~~kl~Dfg 177 (360)
T 3e3p_A 102 NVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEADGTLKLCDFG 177 (360)
T ss_dssp EEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETTTTEEEECCCT
T ss_pred EEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCCCCcEEEeeCC
Confidence 899999986 555555444445667888999999999999999999 76 9999999999999997 8999999999
Q ss_pred CcccccCCCCceeccccCCCCCcchhccccC-CCCchHHHHHHHHHHHHHHcCCCCCCCCccccchhcHhh
Q 003385 750 LSKFAVDGASHVSSIVRGTVGYLDPEYYISQ-QLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQ 819 (824)
Q Consensus 750 la~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~~DIwSlGvil~elltG~~Pf~~~~~~~~~~~iv~ 819 (824)
+++....... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||.+....+...++++
T Consensus 178 ~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~ 246 (360)
T 3e3p_A 178 SAKKLSPSEP--NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVR 246 (360)
T ss_dssp TCBCCCTTSC--CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred CceecCCCCC--cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHH
Confidence 9986544322 2344689999999998765 489999999999999999999999998775555555544
No 199
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=99.97 E-value=7.5e-32 Score=289.08 Aligned_cols=194 Identities=30% Similarity=0.482 Sum_probs=165.9
Q ss_pred HHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCC--cccchhhhHHHHHHhhcCCCccceeeceeec----CCeEEEE
Q 003385 603 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQE----EGRSVLV 675 (824)
Q Consensus 603 ~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~--~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~----~~~~~lV 675 (824)
+.+.+.||+|+||.||+|.+. ++..||+|++.... ....+.+.+|++++++++||||+++++++.. ....++|
T Consensus 28 ~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv 107 (290)
T 1t4h_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV 107 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEE
T ss_pred EEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEE
Confidence 456788999999999999876 57889999987542 2334678899999999999999999998765 4568999
Q ss_pred EEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCC--eEecCCCCCCEEEc-CCCcEEEEecCCcc
Q 003385 676 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPA--IIHRDLKSSNILLD-KHMRAKVSDFGLSK 752 (824)
Q Consensus 676 ~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~g--IvHrDLkp~NILl~-~~~~vkL~DFGla~ 752 (824)
|||+++++|.+++.. ...+++..+..++.|++.||.|||+. + |+||||||+|||++ .++.+||+|||++.
T Consensus 108 ~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~ 180 (290)
T 1t4h_A 108 TELMTSGTLKTYLKR----FKVMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGLAT 180 (290)
T ss_dssp EECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCEEECCTTGGG
T ss_pred EEecCCCCHHHHHHH----ccCCCHHHHHHHHHHHHHHHHHHHcC---CCCEEECCCCHHHEEEECCCCCEEEeeCCCcc
Confidence 999999999999853 35688899999999999999999998 7 99999999999998 78999999999986
Q ss_pred cccCCCCceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCC
Q 003385 753 FAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISN 807 (824)
Q Consensus 753 ~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~ 807 (824)
..... ......||+.|+|||.+. ..++.++||||+||++|+|++|+.||.+
T Consensus 181 ~~~~~---~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~ 231 (290)
T 1t4h_A 181 LKRAS---FAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSE 231 (290)
T ss_dssp GCCTT---SBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred ccccc---ccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCC
Confidence 54332 223346899999999776 5689999999999999999999999976
No 200
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=99.97 E-value=4.4e-32 Score=296.91 Aligned_cols=201 Identities=26% Similarity=0.447 Sum_probs=163.1
Q ss_pred HHHhhccccccCcEEEEEEEEc-CCcE----EEEEEeccC-CcccchhhhHHHHHHhhcCCCccceeeceeecCCeEEEE
Q 003385 602 TKMLEKKIGSGGFGVVYYGKLK-DGKE----IAVKVLTSN-SYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLV 675 (824)
Q Consensus 602 ~~~i~~~LG~G~fg~Vy~a~~~-~g~~----vAVK~l~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV 675 (824)
.|.+.+.||+|+||.||+|++. +++. ||+|.++.. .....+.+.+|++++++++||||+++++++.... .++|
T Consensus 16 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~v 94 (327)
T 3lzb_A 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLI 94 (327)
T ss_dssp TEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEEE
T ss_pred HceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceEE
Confidence 4567789999999999999875 4444 577776543 2334567889999999999999999999998765 7899
Q ss_pred EEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCccccc
Q 003385 676 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAV 755 (824)
Q Consensus 676 ~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~ 755 (824)
+|++.+|+|.+++... ...+++..++.++.|++.||.|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 95 ~~~~~~g~L~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~ 168 (327)
T 3lzb_A 95 TQLMPFGCLLDYVREH---KDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 168 (327)
T ss_dssp ECCCSSCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTC-----
T ss_pred EEecCCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccCcceeEcc
Confidence 9999999999998543 34588999999999999999999998 99999999999999999999999999998654
Q ss_pred CCCCc-eeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHc-CCCCCCCCc
Q 003385 756 DGASH-VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEK 809 (824)
Q Consensus 756 ~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~ellt-G~~Pf~~~~ 809 (824)
..... ......+|+.|+|||.+.+..++.++|||||||++|||++ |+.||.+..
T Consensus 169 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~ 224 (327)
T 3lzb_A 169 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 224 (327)
T ss_dssp -----------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC
T ss_pred CccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCC
Confidence 33222 2233446889999999999999999999999999999999 999998754
No 201
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=99.97 E-value=2.4e-32 Score=298.48 Aligned_cols=201 Identities=28% Similarity=0.461 Sum_probs=174.0
Q ss_pred HHHHhhccccccCcEEEEEEEE-----cCCcEEEEEEeccCCcccchhhhHHHHHHhhcCCCccceeeceee--cCCeEE
Q 003385 601 ATKMLEKKIGSGGFGVVYYGKL-----KDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQ--EEGRSV 673 (824)
Q Consensus 601 ~~~~i~~~LG~G~fg~Vy~a~~-----~~g~~vAVK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~--~~~~~~ 673 (824)
..|.+.+.||+|+||.||+|++ .+++.||||++........+.+.+|++++++++||||+++++++. +.+..+
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 102 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR 102 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEE
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEE
Confidence 3566789999999999999985 367899999998766555677999999999999999999999886 456789
Q ss_pred EEEEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCccc
Q 003385 674 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKF 753 (824)
Q Consensus 674 lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~ 753 (824)
+||||+++++|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 103 lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~ 176 (327)
T 3lxl_A 103 LVMEYLPSGCLRDFLQRH---RARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKL 176 (327)
T ss_dssp EEEECCTTCBHHHHHHHH---GGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGGGCEE
T ss_pred EEEeecCCCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEccccccee
Confidence 999999999999998532 34588999999999999999999998 999999999999999999999999999986
Q ss_pred ccCCCCc--eeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCC
Q 003385 754 AVDGASH--VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISN 807 (824)
Q Consensus 754 ~~~~~~~--~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~ 807 (824)
....... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||..
T Consensus 177 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~ 232 (327)
T 3lxl_A 177 LPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCS 232 (327)
T ss_dssp CCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGS
T ss_pred cccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCcc
Confidence 6443322 22334578889999999999999999999999999999999999864
No 202
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=99.97 E-value=2.3e-32 Score=292.45 Aligned_cols=201 Identities=27% Similarity=0.359 Sum_probs=157.6
Q ss_pred HHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCCcc--cchhhhHHHHHHhhcCCCccceeeceeecCCeEEEEEEe
Q 003385 602 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ--GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEF 678 (824)
Q Consensus 602 ~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~~--~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~ 678 (824)
.|.+.+.||+|+||.||+|++. +++.||||+++..... ..+.+.++...++.++||||+++++++.+.+..++||||
T Consensus 8 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~ 87 (290)
T 3fme_A 8 DLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMEL 87 (290)
T ss_dssp GEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEEEC
T ss_pred hhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEEeh
Confidence 4567789999999999999975 6889999999754222 223344555568888999999999999999999999999
Q ss_pred cCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccccCCC
Q 003385 679 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 758 (824)
Q Consensus 679 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~ 758 (824)
++ |+|.+++.........+++..+..++.|++.||+|||++ .+|+||||||+||+++.++.+||+|||+++......
T Consensus 88 ~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~--~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 164 (290)
T 3fme_A 88 MD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK--LSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDV 164 (290)
T ss_dssp CS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH--SCCCCCCCSGGGCEECTTCCEEBCCC----------
T ss_pred hc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEEECCCCCEEEeecCCcccccccc
Confidence 97 588888765444567789999999999999999999984 289999999999999999999999999997654332
Q ss_pred CceeccccCCCCCcchhcc----ccCCCCchHHHHHHHHHHHHHHcCCCCCCC
Q 003385 759 SHVSSIVRGTVGYLDPEYY----ISQQLTDKSDVYSFGVILLELISGQEAISN 807 (824)
Q Consensus 759 ~~~~~~~~gt~~y~aPE~l----~~~~~~~~~DIwSlGvil~elltG~~Pf~~ 807 (824)
......||+.|+|||.+ ....++.++||||+||++|||++|+.||..
T Consensus 165 --~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 215 (290)
T 3fme_A 165 --AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDS 215 (290)
T ss_dssp -------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCC
T ss_pred --cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccc
Confidence 22334689999999996 556788999999999999999999999975
No 203
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=99.97 E-value=2e-32 Score=305.38 Aligned_cols=201 Identities=31% Similarity=0.521 Sum_probs=158.7
Q ss_pred HHhhccccccCcEEEEEEEEc--CC--cEEEEEEeccCC-cccchhhhHHHHHHhhcCCCccceeeceee-cCCeEEEEE
Q 003385 603 KMLEKKIGSGGFGVVYYGKLK--DG--KEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQ-EEGRSVLVY 676 (824)
Q Consensus 603 ~~i~~~LG~G~fg~Vy~a~~~--~g--~~vAVK~l~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~-~~~~~~lV~ 676 (824)
+.+.+.||+|+||.||+|++. ++ ..||||+++... ....+.+.+|++++++++||||+++++++. ..+..++||
T Consensus 91 ~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~ 170 (373)
T 3c1x_A 91 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL 170 (373)
T ss_dssp EEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEE
T ss_pred eecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEE
Confidence 345688999999999999864 22 358999986532 233567899999999999999999999865 456789999
Q ss_pred EecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccccC
Q 003385 677 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVD 756 (824)
Q Consensus 677 E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~~ 756 (824)
||+++|+|.+++... ...+++..+..++.|+++||+|||++ +|+||||||+|||++.++.+||+|||+++....
T Consensus 171 e~~~~g~L~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~ 244 (373)
T 3c1x_A 171 PYMKHGDLRNFIRNE---THNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 244 (373)
T ss_dssp ECCTTCBHHHHHHCT---TCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC--------
T ss_pred ECCCCCCHHHHHhhc---ccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeeccccccccc
Confidence 999999999998532 34578889999999999999999998 999999999999999999999999999976543
Q ss_pred CCCc---eeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHc-CCCCCCCCc
Q 003385 757 GASH---VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEK 809 (824)
Q Consensus 757 ~~~~---~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~ellt-G~~Pf~~~~ 809 (824)
.... ......+|+.|+|||.+.+..++.++|||||||++|||++ |.+||.+..
T Consensus 245 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~ 301 (373)
T 3c1x_A 245 KEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN 301 (373)
T ss_dssp -------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSC
T ss_pred cccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCC
Confidence 2211 1223457789999999999999999999999999999999 778887644
No 204
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=99.97 E-value=8.3e-32 Score=289.56 Aligned_cols=199 Identities=30% Similarity=0.375 Sum_probs=171.2
Q ss_pred HHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCCc---------ccchhhhHHHHHHhhcC-CCccceeeceeecCC
Q 003385 602 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY---------QGKREFTNEVTLLSRIH-HRNLVQFLGYCQEEG 670 (824)
Q Consensus 602 ~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~---------~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~ 670 (824)
.|.+.+.||+|+||.||+|+++ +++.||||+++.... ...+.+.+|+++++++. ||||+++++++.+.+
T Consensus 18 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~ 97 (298)
T 1phk_A 18 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNT 97 (298)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSS
T ss_pred ccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeeccCC
Confidence 4556789999999999999986 688999999975431 12346788999999995 999999999999999
Q ss_pred eEEEEEEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCC
Q 003385 671 RSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGL 750 (824)
Q Consensus 671 ~~~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGl 750 (824)
..++||||+++++|.+++.. ...+++..+..++.|++.||.|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 98 ~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~ 170 (298)
T 1phk_A 98 FFFLVFDLMKKGELFDYLTE----KVTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFGF 170 (298)
T ss_dssp EEEEEEECCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred eEEEEEeccCCCcHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCcEEEecccc
Confidence 99999999999999999853 35688999999999999999999998 999999999999999999999999999
Q ss_pred cccccCCCCceeccccCCCCCcchhccc------cCCCCchHHHHHHHHHHHHHHcCCCCCCCCc
Q 003385 751 SKFAVDGASHVSSIVRGTVGYLDPEYYI------SQQLTDKSDVYSFGVILLELISGQEAISNEK 809 (824)
Q Consensus 751 a~~~~~~~~~~~~~~~gt~~y~aPE~l~------~~~~~~~~DIwSlGvil~elltG~~Pf~~~~ 809 (824)
+....... ......|++.|+|||++. ...++.++|||||||++|||++|+.||.+..
T Consensus 171 ~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~ 233 (298)
T 1phk_A 171 SCQLDPGE--KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRK 233 (298)
T ss_dssp CEECCTTC--CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred hhhcCCCc--ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCcc
Confidence 97654332 223356899999999985 4567889999999999999999999997643
No 205
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=99.97 E-value=6.7e-32 Score=290.08 Aligned_cols=197 Identities=29% Similarity=0.460 Sum_probs=164.6
Q ss_pred hhccccccCcEEEEEEEEcC-C---cEEEEEEeccCCc-ccchhhhHHHHHHhhcCCCccceeeceeecCCeE-EEEEEe
Q 003385 605 LEKKIGSGGFGVVYYGKLKD-G---KEIAVKVLTSNSY-QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRS-VLVYEF 678 (824)
Q Consensus 605 i~~~LG~G~fg~Vy~a~~~~-g---~~vAVK~l~~~~~-~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~-~lV~E~ 678 (824)
+.+.||+|+||.||+|++.+ + ..||+|+++.... ...+.+.+|++++++++||||+++++++.+.+.. ++||||
T Consensus 25 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~ 104 (298)
T 3pls_A 25 SDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPY 104 (298)
T ss_dssp EEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEECC
T ss_pred cCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEEec
Confidence 45889999999999998643 2 3699999875432 3346788999999999999999999999766655 899999
Q ss_pred cCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccccCCC
Q 003385 679 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 758 (824)
Q Consensus 679 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~ 758 (824)
+.+|+|.+++.. ....+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++......
T Consensus 105 ~~~~~L~~~~~~---~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~ 178 (298)
T 3pls_A 105 MCHGDLLQFIRS---PQRNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDILDRE 178 (298)
T ss_dssp CTTCBHHHHHHC---TTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGG
T ss_pred ccCCCHHHHHhc---cccCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCcccccCCc
Confidence 999999999854 245678899999999999999999998 99999999999999999999999999997543321
Q ss_pred ---CceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCC-CCC
Q 003385 759 ---SHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEA-ISN 807 (824)
Q Consensus 759 ---~~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~P-f~~ 807 (824)
........+|+.|+|||.+.+..++.++|||||||++|||++|..| |..
T Consensus 179 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~ 231 (298)
T 3pls_A 179 YYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRH 231 (298)
T ss_dssp GGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTT
T ss_pred ccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCcc
Confidence 1122334578999999999999999999999999999999995555 443
No 206
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=99.97 E-value=1.6e-32 Score=295.67 Aligned_cols=201 Identities=24% Similarity=0.418 Sum_probs=167.9
Q ss_pred HHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCCcccchhhhHHHHHHhhcCCCccceeeceeecCCeEEEEEEecC
Q 003385 602 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMH 680 (824)
Q Consensus 602 ~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~~ 680 (824)
.|.+.+.||+|+||.||+|+++ +++.||+|++........+.+.+|++++++++||||+++++++.+.+..++||||++
T Consensus 20 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 99 (302)
T 2j7t_A 20 VWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCP 99 (302)
T ss_dssp TEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEECCT
T ss_pred ceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEeCC
Confidence 4567789999999999999987 588999999976655556788999999999999999999999999999999999999
Q ss_pred CCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccccCCCCc
Q 003385 681 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 760 (824)
Q Consensus 681 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~~~ 760 (824)
+++|.+++... ...+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||++....... .
T Consensus 100 ~~~l~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~ 172 (302)
T 2j7t_A 100 GGAVDAIMLEL---DRGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTL-Q 172 (302)
T ss_dssp TEEHHHHHHHH---TSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHH-H
T ss_pred CCcHHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCccccccc-c
Confidence 99999987532 35588999999999999999999998 99999999999999999999999999875432111 1
Q ss_pred eeccccCCCCCcchhccc-----cCCCCchHHHHHHHHHHHHHHcCCCCCCCCc
Q 003385 761 VSSIVRGTVGYLDPEYYI-----SQQLTDKSDVYSFGVILLELISGQEAISNEK 809 (824)
Q Consensus 761 ~~~~~~gt~~y~aPE~l~-----~~~~~~~~DIwSlGvil~elltG~~Pf~~~~ 809 (824)
......||+.|+|||.+. ...++.++|||||||++|||++|+.||....
T Consensus 173 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 226 (302)
T 2j7t_A 173 KRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELN 226 (302)
T ss_dssp C-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred ccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCC
Confidence 122345899999999984 5678899999999999999999999997643
No 207
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=99.97 E-value=3.2e-32 Score=299.64 Aligned_cols=201 Identities=26% Similarity=0.386 Sum_probs=172.6
Q ss_pred HHHhhccccccCcEEEEEEEEcCCcEEEEEEeccCCcccc-----------------hhhhHHHHHHhhcCCCccceeec
Q 003385 602 TKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGK-----------------REFTNEVTLLSRIHHRNLVQFLG 664 (824)
Q Consensus 602 ~~~i~~~LG~G~fg~Vy~a~~~~g~~vAVK~l~~~~~~~~-----------------~~~~~Ei~il~~l~HpnIv~l~~ 664 (824)
.|.+.+.||+|+||.||+|+. +++.||||++........ +.+.+|++++++++||||+++++
T Consensus 32 ~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~ 110 (348)
T 2pml_X 32 DYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEG 110 (348)
T ss_dssp TEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCSE
T ss_pred ceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEEE
Confidence 456778999999999999998 899999999875422211 67899999999999999999999
Q ss_pred eeecCCeEEEEEEecCCCCHHHHhhcc--cC--ccccCCHHHHHHHHHHHHHHHHHHHh-CCCCCeEecCCCCCCEEEcC
Q 003385 665 YCQEEGRSVLVYEFMHNGTLKEHLYGT--LT--HEQRINWIKRLEIAEDAAKGIEYLHT-GCVPAIIHRDLKSSNILLDK 739 (824)
Q Consensus 665 ~~~~~~~~~lV~E~~~~gsL~~~L~~~--~~--~~~~l~~~~~~~i~~qia~gL~yLH~-~~~~gIvHrDLkp~NILl~~ 739 (824)
++.+.+..++||||+++++|.+++... .. ....+++..+..++.|++.||.|||+ . ||+||||||+||+++.
T Consensus 111 ~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl~p~Nil~~~ 187 (348)
T 2pml_X 111 IITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDVKPSNILMDK 187 (348)
T ss_dssp EEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCCCGGGEEECT
T ss_pred EEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCCChHhEEEcC
Confidence 999999999999999999999883210 11 25678999999999999999999999 7 9999999999999999
Q ss_pred CCcEEEEecCCcccccCCCCceeccccCCCCCcchhccccC-CCCc-hHHHHHHHHHHHHHHcCCCCCCCCc
Q 003385 740 HMRAKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQ-QLTD-KSDVYSFGVILLELISGQEAISNEK 809 (824)
Q Consensus 740 ~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~-~~DIwSlGvil~elltG~~Pf~~~~ 809 (824)
++.+||+|||++...... ......||+.|+|||.+.+. .++. ++|||||||++|||++|+.||....
T Consensus 188 ~~~~kl~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 256 (348)
T 2pml_X 188 NGRVKLSDFGESEYMVDK---KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKI 256 (348)
T ss_dssp TSCEEECCCTTCEECBTT---EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred CCcEEEeccccccccccc---cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 999999999999765432 33445689999999999877 6666 9999999999999999999997654
No 208
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=99.97 E-value=8.7e-32 Score=288.76 Aligned_cols=196 Identities=27% Similarity=0.447 Sum_probs=166.4
Q ss_pred ccccccCcEEEEEEEEc-CCcEEEEEEeccCCcccchhhhHHHHHHhhcCCCccceeeceeecCCeEEEEEEecCCCCHH
Q 003385 607 KKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNGTLK 685 (824)
Q Consensus 607 ~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~~~gsL~ 685 (824)
..||+|+||.||+|++. +++.||||++........+.+.+|+.++++++||||+++++++.+.+..++||||+++++|.
T Consensus 28 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 107 (295)
T 2clq_A 28 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLS 107 (295)
T ss_dssp CEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSEEEHH
T ss_pred EEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCCCCHH
Confidence 47999999999999875 67899999998665555677899999999999999999999999999999999999999999
Q ss_pred HHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcC-CCcEEEEecCCcccccCCCCceecc
Q 003385 686 EHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK-HMRAKVSDFGLSKFAVDGASHVSSI 764 (824)
Q Consensus 686 ~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~-~~~vkL~DFGla~~~~~~~~~~~~~ 764 (824)
+++.... ....+++..+..++.|++.||.|||++ +|+||||||+||+++. ++.+||+|||+++...... .....
T Consensus 108 ~~l~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~-~~~~~ 182 (295)
T 2clq_A 108 ALLRSKW-GPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN-PCTET 182 (295)
T ss_dssp HHHHHTT-CCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCEESCC------CC
T ss_pred HHHHhhc-cCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeecccccccCCCC-Ccccc
Confidence 9986432 233467888889999999999999998 9999999999999997 8999999999997654322 12234
Q ss_pred ccCCCCCcchhccccCC--CCchHHHHHHHHHHHHHHcCCCCCCC
Q 003385 765 VRGTVGYLDPEYYISQQ--LTDKSDVYSFGVILLELISGQEAISN 807 (824)
Q Consensus 765 ~~gt~~y~aPE~l~~~~--~~~~~DIwSlGvil~elltG~~Pf~~ 807 (824)
..||+.|+|||.+.... ++.++|||||||++|||++|+.||..
T Consensus 183 ~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 227 (295)
T 2clq_A 183 FTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYE 227 (295)
T ss_dssp CCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGG
T ss_pred cCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccC
Confidence 56899999999987643 88999999999999999999999964
No 209
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=99.97 E-value=2.6e-32 Score=305.36 Aligned_cols=210 Identities=24% Similarity=0.349 Sum_probs=174.1
Q ss_pred ccccCHHHHHHHHHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCCcccchhhhHHHHHHhhcC--------CCccc
Q 003385 590 AHCFTLSDIEDATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIH--------HRNLV 660 (824)
Q Consensus 590 ~~~~~~~~~~~~~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~~~~~~~~~Ei~il~~l~--------HpnIv 660 (824)
.+.+..+++...+|.+.++||+|+||.||+|++. +++.||||+++... ...+.+.+|++++++++ |+||+
T Consensus 26 ~~~~~~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv 104 (397)
T 1wak_A 26 YHLVKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAE-HYTETALDEIRLLKSVRNSDPNDPNREMVV 104 (397)
T ss_dssp CCSSCTTCEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHSCTTCGGGGGBC
T ss_pred ceEEehhhhcCCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCC-cchHHHHHHHHHHHHHhhcCCCCCCcceee
Confidence 3445555655667888899999999999999875 57889999997432 33567889999999985 78899
Q ss_pred eeeceee----cCCeEEEEEEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEE
Q 003385 661 QFLGYCQ----EEGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNIL 736 (824)
Q Consensus 661 ~l~~~~~----~~~~~~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NIL 736 (824)
++++++. +....++||||+ +++|.+.+... ....+++..+..++.||+.||+|||+++ ||+||||||+|||
T Consensus 105 ~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~--~~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIl 179 (397)
T 1wak_A 105 QLLDDFKISGVNGTHICMVFEVL-GHHLLKWIIKS--NYQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENIL 179 (397)
T ss_dssp CEEEEEEEEETTEEEEEEEECCC-CCBHHHHHHHT--TTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEE
T ss_pred eeecceeecCCCCceEEEEEecc-CccHHHHHHhc--ccCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHee
Confidence 9999987 556889999999 55666665432 2356889999999999999999999953 8999999999999
Q ss_pred EcCCC-------------------------------------------------cEEEEecCCcccccCCCCceeccccC
Q 003385 737 LDKHM-------------------------------------------------RAKVSDFGLSKFAVDGASHVSSIVRG 767 (824)
Q Consensus 737 l~~~~-------------------------------------------------~vkL~DFGla~~~~~~~~~~~~~~~g 767 (824)
++.++ .+||+|||+++..... .....|
T Consensus 180 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~----~~~~~g 255 (397)
T 1wak_A 180 LSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH----FTEDIQ 255 (397)
T ss_dssp ECCCHHHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC----SCSCCS
T ss_pred EeccchhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc----CccCCC
Confidence 99775 7999999999765432 233468
Q ss_pred CCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCCCc
Q 003385 768 TVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEK 809 (824)
Q Consensus 768 t~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~~~ 809 (824)
|+.|+|||++.+..++.++|||||||++|||++|+.||.+..
T Consensus 256 t~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~ 297 (397)
T 1wak_A 256 TRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHS 297 (397)
T ss_dssp CGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCC
T ss_pred CCcccCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCc
Confidence 999999999999999999999999999999999999998755
No 210
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=99.97 E-value=3.4e-32 Score=323.56 Aligned_cols=195 Identities=31% Similarity=0.496 Sum_probs=164.0
Q ss_pred ccccccCcEEEEEEEEc---CCcEEEEEEeccCCc--ccchhhhHHHHHHhhcCCCccceeeceeecCCeEEEEEEecCC
Q 003385 607 KKIGSGGFGVVYYGKLK---DGKEIAVKVLTSNSY--QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHN 681 (824)
Q Consensus 607 ~~LG~G~fg~Vy~a~~~---~g~~vAVK~l~~~~~--~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~~~ 681 (824)
+.||+|+||.||+|.+. .++.||||+++.... ...+++.+|+++|++++||||+++++++.+ +..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 47999999999999764 467899999975432 234678999999999999999999999965 457899999999
Q ss_pred CCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccccCCCCc-
Q 003385 682 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH- 760 (824)
Q Consensus 682 gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~~~- 760 (824)
|+|.+++.. ...+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++........
T Consensus 454 g~L~~~l~~----~~~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 526 (635)
T 4fl3_A 454 GPLNKYLQQ----NRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 526 (635)
T ss_dssp EEHHHHHHH----CTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-----
T ss_pred CCHHHHHhh----CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCcccc
Confidence 999999843 45688999999999999999999998 9999999999999999999999999999865443221
Q ss_pred -eeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHc-CCCCCCCCc
Q 003385 761 -VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEK 809 (824)
Q Consensus 761 -~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~ellt-G~~Pf~~~~ 809 (824)
......+|+.|+|||++....++.++|||||||++|||++ |+.||.+..
T Consensus 527 ~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~ 577 (635)
T 4fl3_A 527 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK 577 (635)
T ss_dssp --------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC
T ss_pred ccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCC
Confidence 2223346789999999999999999999999999999998 999998754
No 211
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=99.97 E-value=5.3e-32 Score=301.53 Aligned_cols=203 Identities=25% Similarity=0.398 Sum_probs=168.5
Q ss_pred HHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCCc--ccchhhhHHHHHHhhcCCCccceeeceeecCCeE------
Q 003385 602 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY--QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRS------ 672 (824)
Q Consensus 602 ~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~--~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~------ 672 (824)
.|.+.+.||+|+||.||+|.++ +|+.||||++..... ...+.+.+|++++++++||||+++++++...+..
T Consensus 43 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 122 (371)
T 4exu_A 43 TYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDF 122 (371)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCCC
T ss_pred cEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccceeE
Confidence 4566789999999999999876 688999999975422 2246788999999999999999999999876654
Q ss_pred EEEEEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcc
Q 003385 673 VLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSK 752 (824)
Q Consensus 673 ~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~ 752 (824)
++||||+. ++|.+.+. ..+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++
T Consensus 123 ~lv~e~~~-~~l~~~~~------~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg~a~ 192 (371)
T 4exu_A 123 YLVMPFMQ-TDLQKIMG------MEFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLAR 192 (371)
T ss_dssp EEEEECCC-EEHHHHTT------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTTCC-
T ss_pred EEEEcccc-ccHHHHhh------cCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecCccc
Confidence 99999997 68877762 3488999999999999999999998 99999999999999999999999999997
Q ss_pred cccCCCCceeccccCCCCCcchhcccc-CCCCchHHHHHHHHHHHHHHcCCCCCCCCccccchhcHh
Q 003385 753 FAVDGASHVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIV 818 (824)
Q Consensus 753 ~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~~DIwSlGvil~elltG~~Pf~~~~~~~~~~~iv 818 (824)
..... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+....+...+++
T Consensus 193 ~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~ 255 (371)
T 4exu_A 193 HADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQIL 255 (371)
T ss_dssp -----------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH
T ss_pred ccccC----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Confidence 54322 233568999999999887 688999999999999999999999998876544444443
No 212
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=99.97 E-value=4.1e-32 Score=291.47 Aligned_cols=200 Identities=32% Similarity=0.486 Sum_probs=166.8
Q ss_pred HHHhhc-cccccCcEEEEEEEEc---CCcEEEEEEeccCCc--ccchhhhHHHHHHhhcCCCccceeeceeecCCeEEEE
Q 003385 602 TKMLEK-KIGSGGFGVVYYGKLK---DGKEIAVKVLTSNSY--QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLV 675 (824)
Q Consensus 602 ~~~i~~-~LG~G~fg~Vy~a~~~---~g~~vAVK~l~~~~~--~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV 675 (824)
.+.+.+ .||+|+||.||+|.+. .++.||||+++.... ...+.+.+|++++++++||||+++++++ ..+..++|
T Consensus 17 ~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~lv 95 (291)
T 1xbb_A 17 LLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLV 95 (291)
T ss_dssp GEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEEE
T ss_pred hhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEEE
Confidence 344555 8999999999999653 467899999975432 2246788999999999999999999999 55678999
Q ss_pred EEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCccccc
Q 003385 676 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAV 755 (824)
Q Consensus 676 ~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~ 755 (824)
|||+++++|.+++.. ...+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 96 ~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 168 (291)
T 1xbb_A 96 MEMAELGPLNKYLQQ----NRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALR 168 (291)
T ss_dssp EECCTTEEHHHHHHH----CTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEECC
T ss_pred EEeCCCCCHHHHHHh----CcCCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEccCCcceeec
Confidence 999999999999853 34588999999999999999999998 99999999999999999999999999998664
Q ss_pred CCCCcee--ccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHc-CCCCCCCCc
Q 003385 756 DGASHVS--SIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEK 809 (824)
Q Consensus 756 ~~~~~~~--~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~ellt-G~~Pf~~~~ 809 (824)
....... ....+++.|+|||.+.+..++.++|||||||++|||++ |+.||.+..
T Consensus 169 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~ 225 (291)
T 1xbb_A 169 ADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK 225 (291)
T ss_dssp TTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCC
T ss_pred cCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCC
Confidence 4333221 22346788999999998889999999999999999999 999998644
No 213
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=99.97 E-value=5.6e-32 Score=297.02 Aligned_cols=201 Identities=26% Similarity=0.381 Sum_probs=167.0
Q ss_pred HHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCCc-ccchhhhHHHHH-HhhcCCCccceeeceeecCCeEEEEEEe
Q 003385 602 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY-QGKREFTNEVTL-LSRIHHRNLVQFLGYCQEEGRSVLVYEF 678 (824)
Q Consensus 602 ~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~-~~~~~~~~Ei~i-l~~l~HpnIv~l~~~~~~~~~~~lV~E~ 678 (824)
.+.+.+.||+|+||.||+|++. +|+.||||+++.... ....++..|..+ ++.++||||+++++++.+.+..++||||
T Consensus 52 ~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~ 131 (340)
T 3an0_A 52 DLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMEL 131 (340)
T ss_dssp CEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEECC
T ss_pred heeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEHHH
Confidence 3456788999999999999875 688999999975432 223445555555 7778999999999999999999999999
Q ss_pred cCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccccCCC
Q 003385 679 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 758 (824)
Q Consensus 679 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~ 758 (824)
+++ +|.+++.........+++..+..++.||+.||+|||++ .+|+||||||+|||++.++.+||+|||+++.....
T Consensus 132 ~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~--~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~- 207 (340)
T 3an0_A 132 MDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK--LSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDS- 207 (340)
T ss_dssp CSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHH--TCCCCCSCCSTTEEECSTTCEEECCCSHHHHHSCH-
T ss_pred hhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEEECCCCCEEEeeCCCceecccc-
Confidence 985 89888865444556789999999999999999999974 28999999999999999999999999998765322
Q ss_pred CceeccccCCCCCcchhccc----cCCCCchHHHHHHHHHHHHHHcCCCCCCC
Q 003385 759 SHVSSIVRGTVGYLDPEYYI----SQQLTDKSDVYSFGVILLELISGQEAISN 807 (824)
Q Consensus 759 ~~~~~~~~gt~~y~aPE~l~----~~~~~~~~DIwSlGvil~elltG~~Pf~~ 807 (824)
.......||+.|+|||++. ...++.++|||||||++|||++|+.||..
T Consensus 208 -~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~ 259 (340)
T 3an0_A 208 -VAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDS 259 (340)
T ss_dssp -HHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCC
T ss_pred -cccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCcc
Confidence 1223346999999999964 34788999999999999999999999975
No 214
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=99.97 E-value=1.2e-31 Score=292.13 Aligned_cols=209 Identities=23% Similarity=0.359 Sum_probs=172.9
Q ss_pred HHHhhccccccCcEEEEEEEEc--CCcEEEEEEeccCCc--ccchhhhHHHHHHhhc---CCCccceeeceee-----cC
Q 003385 602 TKMLEKKIGSGGFGVVYYGKLK--DGKEIAVKVLTSNSY--QGKREFTNEVTLLSRI---HHRNLVQFLGYCQ-----EE 669 (824)
Q Consensus 602 ~~~i~~~LG~G~fg~Vy~a~~~--~g~~vAVK~l~~~~~--~~~~~~~~Ei~il~~l---~HpnIv~l~~~~~-----~~ 669 (824)
.|.+.+.||+|+||.||+|++. +++.||+|+++.... .....+.+|+++++.+ +||||+++++++. ..
T Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~ 91 (326)
T 1blx_A 12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE 91 (326)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSE
T ss_pred ceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCCC
Confidence 4567889999999999999983 678899999874432 2234677888888777 8999999999987 55
Q ss_pred CeEEEEEEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecC
Q 003385 670 GRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFG 749 (824)
Q Consensus 670 ~~~~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFG 749 (824)
...++||||++ |+|.+++... ....+++..+..++.|++.||.|||++ ||+||||||+||+++.++.+||+|||
T Consensus 92 ~~~~lv~e~~~-~~L~~~l~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~kl~Dfg 165 (326)
T 1blx_A 92 TKLTLVFEHVD-QDLTTYLDKV--PEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFG 165 (326)
T ss_dssp EEEEEEEECCS-CBHHHHHHHS--CTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECSCC
T ss_pred ceEEEEEecCC-CCHHHHHHhc--ccCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEEEecCc
Confidence 67899999998 6999988543 234588999999999999999999998 99999999999999999999999999
Q ss_pred CcccccCCCCceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCCCccccchhcHh
Q 003385 750 LSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIV 818 (824)
Q Consensus 750 la~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~~~~~~~~~~iv 818 (824)
+++..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.+....+...+++
T Consensus 166 ~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~ 232 (326)
T 1blx_A 166 LARIYSFQ--MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKIL 232 (326)
T ss_dssp SCCCCCGG--GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH
T ss_pred ccccccCC--CCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH
Confidence 98765322 12234568999999999999999999999999999999999999998866444443443
No 215
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=99.97 E-value=4e-32 Score=289.41 Aligned_cols=196 Identities=33% Similarity=0.528 Sum_probs=162.5
Q ss_pred HHHhhccccccCcEEEEEEEEcCCcEEEEEEeccCCcccchhhhHHHHHHhhcCCCccceeeceeecC-CeEEEEEEecC
Q 003385 602 TKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEE-GRSVLVYEFMH 680 (824)
Q Consensus 602 ~~~i~~~LG~G~fg~Vy~a~~~~g~~vAVK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~-~~~~lV~E~~~ 680 (824)
.|.+.+.||+|+||.||+|+++ ++.||||+++... ..+.+.+|++++++++||||+++++++.+. +..++||||++
T Consensus 22 ~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 98 (278)
T 1byg_A 22 ELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMA 98 (278)
T ss_dssp GEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCT
T ss_pred hceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecCC
Confidence 4567789999999999999886 8899999987543 456788999999999999999999987544 47899999999
Q ss_pred CCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccccCCCCc
Q 003385 681 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASH 760 (824)
Q Consensus 681 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~~~ 760 (824)
+++|.+++... ....+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++......
T Consensus 99 ~~~L~~~l~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~-- 171 (278)
T 1byg_A 99 KGSLVDYLRSR--GRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-- 171 (278)
T ss_dssp TEEHHHHHHHH--HHHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC----------
T ss_pred CCCHHHHHHhc--ccccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeeccccccccccc--
Confidence 99999998532 123378888999999999999999998 99999999999999999999999999987543321
Q ss_pred eeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHc-CCCCCCCCc
Q 003385 761 VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEK 809 (824)
Q Consensus 761 ~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~ellt-G~~Pf~~~~ 809 (824)
....+++.|+|||.+.+..++.++|||||||++|||++ |+.||....
T Consensus 172 --~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~ 219 (278)
T 1byg_A 172 --DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP 219 (278)
T ss_dssp ------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSC
T ss_pred --cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCC
Confidence 22357889999999999999999999999999999998 999998654
No 216
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=99.97 E-value=1.1e-31 Score=292.51 Aligned_cols=201 Identities=26% Similarity=0.452 Sum_probs=165.0
Q ss_pred HHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCCcccchhhhHHHHHHhhc-CCCccceeeceeec------CCeEE
Q 003385 602 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRI-HHRNLVQFLGYCQE------EGRSV 673 (824)
Q Consensus 602 ~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~------~~~~~ 673 (824)
.|.+.+.||+|+||.||+|++. +++.||||++.... ...+.+.+|+++++++ +||||+++++++.. .+..+
T Consensus 25 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~ 103 (326)
T 2x7f_A 25 IFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLW 103 (326)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEEE
T ss_pred cEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccceEE
Confidence 3567789999999999999985 68899999987543 3356788999999999 79999999999876 46789
Q ss_pred EEEEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCccc
Q 003385 674 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKF 753 (824)
Q Consensus 674 lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~ 753 (824)
+||||+++++|.+++... ....+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++..
T Consensus 104 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~ 178 (326)
T 2x7f_A 104 LVMEFCGAGSVTDLIKNT--KGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQ 178 (326)
T ss_dssp EEEECCTTEEHHHHHHHS--GGGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCTTTC-
T ss_pred EEEEcCCCCcHHHHHHhc--ccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCCEEEeeCcCcee
Confidence 999999999999998643 235688899999999999999999998 999999999999999999999999999876
Q ss_pred ccCCCCceeccccCCCCCcchhccc-----cCCCCchHHHHHHHHHHHHHHcCCCCCCCCc
Q 003385 754 AVDGASHVSSIVRGTVGYLDPEYYI-----SQQLTDKSDVYSFGVILLELISGQEAISNEK 809 (824)
Q Consensus 754 ~~~~~~~~~~~~~gt~~y~aPE~l~-----~~~~~~~~DIwSlGvil~elltG~~Pf~~~~ 809 (824)
...... ......||+.|+|||++. ...++.++|||||||++|||++|+.||.+..
T Consensus 179 ~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 238 (326)
T 2x7f_A 179 LDRTVG-RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMH 238 (326)
T ss_dssp -------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred cCcCcc-ccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCc
Confidence 543221 223346899999999987 5678899999999999999999999997643
No 217
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=99.97 E-value=1.4e-31 Score=293.63 Aligned_cols=204 Identities=27% Similarity=0.450 Sum_probs=172.2
Q ss_pred cCHHHHHHHHHHhhccccccCcEEEEEEEEcCCcEEEEEEeccCCcccchhhhHHHHHHhh--cCCCccceeeceeecCC
Q 003385 593 FTLSDIEDATKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSR--IHHRNLVQFLGYCQEEG 670 (824)
Q Consensus 593 ~~~~~~~~~~~~i~~~LG~G~fg~Vy~a~~~~g~~vAVK~l~~~~~~~~~~~~~Ei~il~~--l~HpnIv~l~~~~~~~~ 670 (824)
+...+.....|.+.+.||+|+||.||+|++. ++.||||+++.. ..+.+.+|+++++. ++||||+++++++....
T Consensus 34 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~ 109 (342)
T 1b6c_B 34 LLVQRTIARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDN 109 (342)
T ss_dssp HHHHHHHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCC
T ss_pred eeecccccccEEEEeeecCCCCcEEEEEEEc-CccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccC
Confidence 3445666678888999999999999999985 899999998643 24567788998887 78999999999998775
Q ss_pred ----eEEEEEEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHH--------hCCCCCeEecCCCCCCEEEc
Q 003385 671 ----RSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLH--------TGCVPAIIHRDLKSSNILLD 738 (824)
Q Consensus 671 ----~~~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH--------~~~~~gIvHrDLkp~NILl~ 738 (824)
..++||||+++|+|.+++.. ..+++..++.++.|++.||.||| +. +|+||||||+|||++
T Consensus 110 ~~~~~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NIll~ 181 (342)
T 1b6c_B 110 GTWTQLWLVSDYHEHGSLFDYLNR-----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVK 181 (342)
T ss_dssp SSCCCEEEEECCCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGEEEC
T ss_pred CccceeEEEEeecCCCcHHHHHhc-----cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHEEEC
Confidence 78999999999999999853 35889999999999999999999 66 999999999999999
Q ss_pred CCCcEEEEecCCcccccCCCCc---eeccccCCCCCcchhccccCC------CCchHHHHHHHHHHHHHHcC--------
Q 003385 739 KHMRAKVSDFGLSKFAVDGASH---VSSIVRGTVGYLDPEYYISQQ------LTDKSDVYSFGVILLELISG-------- 801 (824)
Q Consensus 739 ~~~~vkL~DFGla~~~~~~~~~---~~~~~~gt~~y~aPE~l~~~~------~~~~~DIwSlGvil~elltG-------- 801 (824)
.++.+||+|||+++........ ......||+.|+|||.+.... ++.++|||||||++|||++|
T Consensus 182 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~ 261 (342)
T 1b6c_B 182 KNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHE 261 (342)
T ss_dssp TTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCC
T ss_pred CCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCccc
Confidence 9999999999999766543322 123446999999999987653 33689999999999999999
Q ss_pred --CCCCCCC
Q 003385 802 --QEAISNE 808 (824)
Q Consensus 802 --~~Pf~~~ 808 (824)
+.||...
T Consensus 262 ~~~~p~~~~ 270 (342)
T 1b6c_B 262 DYQLPYYDL 270 (342)
T ss_dssp CCCCTTTTT
T ss_pred ccccCcccc
Confidence 7888654
No 218
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=99.97 E-value=1.2e-31 Score=289.31 Aligned_cols=202 Identities=25% Similarity=0.382 Sum_probs=167.2
Q ss_pred HHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCC----cccchhhhHHHHHHhhcCCCccceeecee--ecCCeEEE
Q 003385 602 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS----YQGKREFTNEVTLLSRIHHRNLVQFLGYC--QEEGRSVL 674 (824)
Q Consensus 602 ~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~----~~~~~~~~~Ei~il~~l~HpnIv~l~~~~--~~~~~~~l 674 (824)
.|.+.+.||+|+||.||+|.+. +++.||+|+++... ....+.+.+|++++++++||||+++++++ .+.+..++
T Consensus 6 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (305)
T 2wtk_C 6 KYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYM 85 (305)
T ss_dssp CBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEEE
T ss_pred ceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEEE
Confidence 3567789999999999999875 68899999997542 22346788999999999999999999998 44567899
Q ss_pred EEEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccc
Q 003385 675 VYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFA 754 (824)
Q Consensus 675 V~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~ 754 (824)
||||++++ |.+.+... ....+++..+..++.|++.||.|||++ +|+||||||+||+++.++.+||+|||++...
T Consensus 86 v~e~~~~~-l~~~~~~~--~~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~ 159 (305)
T 2wtk_C 86 VMEYCVCG-MQEMLDSV--PEKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEAL 159 (305)
T ss_dssp EEECCSEE-HHHHHHHS--TTCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EehhccCC-HHHHHHhC--cccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeecccccccc
Confidence 99999877 76766432 245688999999999999999999998 9999999999999999999999999999765
Q ss_pred cCCC-CceeccccCCCCCcchhccccCCC--CchHHHHHHHHHHHHHHcCCCCCCCCc
Q 003385 755 VDGA-SHVSSIVRGTVGYLDPEYYISQQL--TDKSDVYSFGVILLELISGQEAISNEK 809 (824)
Q Consensus 755 ~~~~-~~~~~~~~gt~~y~aPE~l~~~~~--~~~~DIwSlGvil~elltG~~Pf~~~~ 809 (824)
.... ........||+.|+|||++.+... +.++|||||||++|||++|+.||.+..
T Consensus 160 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 217 (305)
T 2wtk_C 160 HPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDN 217 (305)
T ss_dssp CTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred CccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCch
Confidence 4322 223344568999999999876443 679999999999999999999998754
No 219
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=99.97 E-value=2.1e-32 Score=294.58 Aligned_cols=204 Identities=26% Similarity=0.423 Sum_probs=155.1
Q ss_pred HHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCC-cccchhhhHHHHHHhhcCCCccceeeceeecCCeEEEEEEec
Q 003385 602 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 679 (824)
Q Consensus 602 ~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~ 679 (824)
.|.+.+.||+|+||.||+|.+. +++.||||++.... ....+.+.+|++++++++||||+++++++...+..++||||+
T Consensus 16 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 95 (303)
T 2vwi_A 16 DYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLL 95 (303)
T ss_dssp CCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEEECC
T ss_pred hhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEehhc
Confidence 4567789999999999999864 68899999986543 233567889999999999999999999999999999999999
Q ss_pred CCCCHHHHhhccc----CccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCccccc
Q 003385 680 HNGTLKEHLYGTL----THEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAV 755 (824)
Q Consensus 680 ~~gsL~~~L~~~~----~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~ 755 (824)
++++|.+++.... .....+++..+..++.|++.||.|||++ +|+||||||+||+++.++.+||+|||++....
T Consensus 96 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~ 172 (303)
T 2vwi_A 96 SGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVSAFLA 172 (303)
T ss_dssp TTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCHHHHHCC
T ss_pred cCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEEeccchheec
Confidence 9999999885321 1245588999999999999999999998 99999999999999999999999999987553
Q ss_pred CCCC----ceeccccCCCCCcchhcccc-CCCCchHHHHHHHHHHHHHHcCCCCCCCC
Q 003385 756 DGAS----HVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNE 808 (824)
Q Consensus 756 ~~~~----~~~~~~~gt~~y~aPE~l~~-~~~~~~~DIwSlGvil~elltG~~Pf~~~ 808 (824)
.... .......||+.|+|||.+.. ..++.++|||||||++|||++|+.||...
T Consensus 173 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 230 (303)
T 2vwi_A 173 TGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKY 230 (303)
T ss_dssp ---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred cCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccC
Confidence 3211 11233468999999999876 57899999999999999999999999764
No 220
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=99.97 E-value=2.3e-31 Score=291.12 Aligned_cols=203 Identities=29% Similarity=0.466 Sum_probs=164.8
Q ss_pred HHHHHHHHHhhccccccCcEEEEEEEEcCCcEEEEEEeccCCcccchhhhHHHHHHhhc--CCCccceeeceeecC----
Q 003385 596 SDIEDATKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRI--HHRNLVQFLGYCQEE---- 669 (824)
Q Consensus 596 ~~~~~~~~~i~~~LG~G~fg~Vy~a~~~~g~~vAVK~l~~~~~~~~~~~~~Ei~il~~l--~HpnIv~l~~~~~~~---- 669 (824)
.......|.+.+.||+|+||.||+|+++ ++.||||++.... .....+|.+++..+ +||||+++++++...
T Consensus 32 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~ 107 (337)
T 3mdy_A 32 QRTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTE---EASWFRETEIYQTVLMRHENILGFIAADIKGTGSW 107 (337)
T ss_dssp HTTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGG
T ss_pred ccccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEeccc---cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCC
Confidence 3445567888999999999999999987 8999999986432 23445566665554 899999999998876
Q ss_pred CeEEEEEEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCC-----CCCeEecCCCCCCEEEcCCCcEE
Q 003385 670 GRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGC-----VPAIIHRDLKSSNILLDKHMRAK 744 (824)
Q Consensus 670 ~~~~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~-----~~gIvHrDLkp~NILl~~~~~vk 744 (824)
...++||||+++|+|.+++.. ..+++..++.++.|++.||+|||+++ .++|+||||||+|||++.++.+|
T Consensus 108 ~~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~k 182 (337)
T 3mdy_A 108 TQLYLITDYHENGSLYDYLKS-----TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCC 182 (337)
T ss_dssp CEEEEEECCCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEE
T ss_pred CceEEEEeccCCCcHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEE
Confidence 788999999999999999843 35889999999999999999999851 23899999999999999999999
Q ss_pred EEecCCcccccCCCCce---eccccCCCCCcchhccccCCCCch------HHHHHHHHHHHHHHcC----------CCCC
Q 003385 745 VSDFGLSKFAVDGASHV---SSIVRGTVGYLDPEYYISQQLTDK------SDVYSFGVILLELISG----------QEAI 805 (824)
Q Consensus 745 L~DFGla~~~~~~~~~~---~~~~~gt~~y~aPE~l~~~~~~~~------~DIwSlGvil~elltG----------~~Pf 805 (824)
|+|||+++......... .....||+.|+|||++.......+ +|||||||++|||++| +.||
T Consensus 183 l~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~ 262 (337)
T 3mdy_A 183 IADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPY 262 (337)
T ss_dssp ECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTT
T ss_pred EEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccH
Confidence 99999997654332221 124569999999999987766654 9999999999999999 7777
Q ss_pred CC
Q 003385 806 SN 807 (824)
Q Consensus 806 ~~ 807 (824)
..
T Consensus 263 ~~ 264 (337)
T 3mdy_A 263 HD 264 (337)
T ss_dssp TT
T ss_pred hh
Confidence 54
No 221
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=99.97 E-value=1.2e-31 Score=295.51 Aligned_cols=200 Identities=24% Similarity=0.368 Sum_probs=167.0
Q ss_pred HHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCC-cccchhhhHHHHHHhhcCCCccceeeceeecC-----CeEEE
Q 003385 602 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEE-----GRSVL 674 (824)
Q Consensus 602 ~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~-----~~~~l 674 (824)
.|.+.+.||+|+||.||+|++. +|+.||||+++... ......+.+|++++++++||||+++++++... ...++
T Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~l 91 (353)
T 2b9h_A 12 DFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYI 91 (353)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEEE
T ss_pred ceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEEE
Confidence 3556789999999999999986 68899999996432 22345678999999999999999999987654 67899
Q ss_pred EEEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccc
Q 003385 675 VYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFA 754 (824)
Q Consensus 675 V~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~ 754 (824)
||||+. ++|.+++.. ..+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++..
T Consensus 92 v~e~~~-~~L~~~~~~-----~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~ 162 (353)
T 2b9h_A 92 IQELMQ-TDLHRVIST-----QMLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARII 162 (353)
T ss_dssp EECCCS-EEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEeccC-ccHHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEeccccccc
Confidence 999997 589888743 4588999999999999999999998 9999999999999999999999999999865
Q ss_pred cCCCCc---------eeccccCCCCCcchhcccc-CCCCchHHHHHHHHHHHHHHcCCCCCCCCcc
Q 003385 755 VDGASH---------VSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKF 810 (824)
Q Consensus 755 ~~~~~~---------~~~~~~gt~~y~aPE~l~~-~~~~~~~DIwSlGvil~elltG~~Pf~~~~~ 810 (824)
...... ......||+.|+|||++.. ..++.++|||||||++|||++|+.||.+...
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~ 228 (353)
T 2b9h_A 163 DESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDY 228 (353)
T ss_dssp C----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred ccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCc
Confidence 432111 1123468999999998765 6789999999999999999999999987653
No 222
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=99.97 E-value=3.7e-31 Score=304.39 Aligned_cols=199 Identities=23% Similarity=0.396 Sum_probs=168.8
Q ss_pred HHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCCcccchhhhHHHHHHhhcCC-CccceeeceeecCCeEEEEEEec
Q 003385 602 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHH-RNLVQFLGYCQEEGRSVLVYEFM 679 (824)
Q Consensus 602 ~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~~~~~~~~~Ei~il~~l~H-pnIv~l~~~~~~~~~~~lV~E~~ 679 (824)
.|.+.++||+|+||.||+|++. +++.||||++.... ..+++.+|+++++.++| ++|..+..++...+..++||||+
T Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~ 85 (483)
T 3sv0_A 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT--KHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL 85 (483)
T ss_dssp TEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTC--SSCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred cEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccc--ccHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC
Confidence 4567789999999999999874 68999999886543 24568899999999987 55556666667788899999999
Q ss_pred CCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEE---cCCCcEEEEecCCcccccC
Q 003385 680 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILL---DKHMRAKVSDFGLSKFAVD 756 (824)
Q Consensus 680 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl---~~~~~vkL~DFGla~~~~~ 756 (824)
+++|.+++... ...+++..++.++.||+.||.|||++ +|+||||||+|||+ +.++.+||+|||+++....
T Consensus 86 -g~sL~~ll~~~---~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~ 158 (483)
T 3sv0_A 86 -GPSLEDLFNFC---SRKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRD 158 (483)
T ss_dssp -CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred -CCCHHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCCcceeccC
Confidence 89999998532 35689999999999999999999998 99999999999999 5789999999999986654
Q ss_pred CCCc------eeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCCCc
Q 003385 757 GASH------VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEK 809 (824)
Q Consensus 757 ~~~~------~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~~~ 809 (824)
.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.+..
T Consensus 159 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~ 217 (483)
T 3sv0_A 159 TSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLK 217 (483)
T ss_dssp TTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCC
T ss_pred CccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccc
Confidence 3321 1224569999999999999999999999999999999999999998744
No 223
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=99.97 E-value=1.7e-31 Score=291.71 Aligned_cols=201 Identities=24% Similarity=0.372 Sum_probs=171.5
Q ss_pred HHHHHhhccccccCcEEEEEEEE-c-CCcEEEEEEeccCCcccchhhhHHHHHHhhcCCCc------cceeeceeecCCe
Q 003385 600 DATKMLEKKIGSGGFGVVYYGKL-K-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRN------LVQFLGYCQEEGR 671 (824)
Q Consensus 600 ~~~~~i~~~LG~G~fg~Vy~a~~-~-~g~~vAVK~l~~~~~~~~~~~~~Ei~il~~l~Hpn------Iv~l~~~~~~~~~ 671 (824)
..+|.+.+.||+|+||.||+|.+ + +++.||||+++... ...+.+.+|+++++.++|++ |+++++++.+.+.
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~ 91 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD-RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGH 91 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTE
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC-chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCc
Confidence 34567789999999999999987 3 67899999996432 33567888999999987654 9999999999999
Q ss_pred EEEEEEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcC------------
Q 003385 672 SVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK------------ 739 (824)
Q Consensus 672 ~~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~------------ 739 (824)
.++||||+ +++|.+++... ....+++..+..++.|++.||+|||++ +|+||||||+|||++.
T Consensus 92 ~~lv~e~~-~~~l~~~l~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~~~~~ 165 (339)
T 1z57_A 92 ICIVFELL-GLSTYDFIKEN--GFLPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPKIK 165 (339)
T ss_dssp EEEEEECC-CCBHHHHHHHT--TTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEEC----
T ss_pred EEEEEcCC-CCCHHHHHHhc--CCCCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccccCCccc
Confidence 99999999 88999988543 224578899999999999999999998 9999999999999987
Q ss_pred -------CCcEEEEecCCcccccCCCCceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCCCccc
Q 003385 740 -------HMRAKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFG 811 (824)
Q Consensus 740 -------~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~~~~~ 811 (824)
++.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||......
T Consensus 166 ~~~~~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~ 240 (339)
T 1z57_A 166 RDERTLINPDIKVVDFGSATYDDEH----HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSK 240 (339)
T ss_dssp CEEEEESCCCEEECCCSSCEETTSC----CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHH
T ss_pred cccccccCCCceEeeCcccccCccc----cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChH
Confidence 668999999999764332 23346899999999999999999999999999999999999999876533
No 224
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=99.97 E-value=5.7e-32 Score=295.52 Aligned_cols=209 Identities=29% Similarity=0.476 Sum_probs=170.7
Q ss_pred HHHHHHHhhccccccCcEEEEEEEE------cCCcEEEEEEeccC-CcccchhhhHHHHHHhhcCCCccceeeceeecCC
Q 003385 598 IEDATKMLEKKIGSGGFGVVYYGKL------KDGKEIAVKVLTSN-SYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEG 670 (824)
Q Consensus 598 ~~~~~~~i~~~LG~G~fg~Vy~a~~------~~g~~vAVK~l~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~ 670 (824)
+....|.+.+.||+|+||.||+|++ .+++.||||++... .......+.+|+.++++++||||+++++++.+.+
T Consensus 27 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 106 (327)
T 2yfx_A 27 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSL 106 (327)
T ss_dssp CCGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred CChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCC
Confidence 3445667889999999999999984 25778999999644 2334567889999999999999999999999999
Q ss_pred eEEEEEEecCCCCHHHHhhcccC---ccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcC---CCcEE
Q 003385 671 RSVLVYEFMHNGTLKEHLYGTLT---HEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK---HMRAK 744 (824)
Q Consensus 671 ~~~lV~E~~~~gsL~~~L~~~~~---~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~---~~~vk 744 (824)
..++||||+++++|.+++..... ....+++..++.++.|++.||.|||++ +|+||||||+|||++. +..+|
T Consensus 107 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~~~k 183 (327)
T 2yfx_A 107 PRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAK 183 (327)
T ss_dssp SCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEE
T ss_pred CcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcceEE
Confidence 99999999999999999965421 224588999999999999999999998 9999999999999994 45699
Q ss_pred EEecCCcccccCCCC-ceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHc-CCCCCCCCc
Q 003385 745 VSDFGLSKFAVDGAS-HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEK 809 (824)
Q Consensus 745 L~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~ellt-G~~Pf~~~~ 809 (824)
|+|||+++....... .......||+.|+|||.+.+..++.++|||||||++|||++ |+.||....
T Consensus 184 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~ 250 (327)
T 2yfx_A 184 IGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS 250 (327)
T ss_dssp ECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred ECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcC
Confidence 999999875433221 12233457899999999999999999999999999999998 999997644
No 225
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=99.97 E-value=9.4e-32 Score=293.76 Aligned_cols=201 Identities=32% Similarity=0.545 Sum_probs=171.7
Q ss_pred HHHHhhccccccCcEEEEEEEE-----cCCcEEEEEEeccCCcccchhhhHHHHHHhhcCCCccceeeceeecCC--eEE
Q 003385 601 ATKMLEKKIGSGGFGVVYYGKL-----KDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEG--RSV 673 (824)
Q Consensus 601 ~~~~i~~~LG~G~fg~Vy~a~~-----~~g~~vAVK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~--~~~ 673 (824)
..+.+.+.||+|+||.||+|++ .+++.||||++........+.+.+|++++++++||||+++++++...+ ..+
T Consensus 41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 120 (326)
T 2w1i_A 41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK 120 (326)
T ss_dssp GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCE
T ss_pred HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceE
Confidence 3456789999999999999985 368899999998665555678999999999999999999999886543 679
Q ss_pred EEEEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCccc
Q 003385 674 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKF 753 (824)
Q Consensus 674 lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~ 753 (824)
+||||+++++|.+++... ...+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 121 lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Dfg~~~~ 194 (326)
T 2w1i_A 121 LIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKV 194 (326)
T ss_dssp EEECCCTTCBHHHHHHHS---TTSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEE
T ss_pred EEEECCCCCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecCcchhh
Confidence 999999999999998543 34588999999999999999999998 999999999999999999999999999986
Q ss_pred ccCCCCce--eccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCC
Q 003385 754 AVDGASHV--SSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISN 807 (824)
Q Consensus 754 ~~~~~~~~--~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~ 807 (824)
........ .....++..|+|||.+.+..++.++|||||||++|||++|..||..
T Consensus 195 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~ 250 (326)
T 2w1i_A 195 LPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 250 (326)
T ss_dssp CCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGS
T ss_pred ccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCC
Confidence 64433221 2233467889999999988899999999999999999999998864
No 226
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=99.97 E-value=2.6e-31 Score=284.59 Aligned_cols=203 Identities=30% Similarity=0.431 Sum_probs=173.1
Q ss_pred HHHHHHHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCCc--ccchhhhHHHHHHhhcCCCccceeeceeecCCeEE
Q 003385 597 DIEDATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY--QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSV 673 (824)
Q Consensus 597 ~~~~~~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~--~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 673 (824)
.....+|.+.+.||+|+||.||+|+.. +++.||||++..... ...+.+.+|++++++++||||+++++++.+.+..+
T Consensus 18 ~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 97 (287)
T 2wei_A 18 GTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFY 97 (287)
T ss_dssp HHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred HHHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEE
Confidence 444567888899999999999999986 689999999865432 23467889999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCC---CcEEEEecCC
Q 003385 674 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKH---MRAKVSDFGL 750 (824)
Q Consensus 674 lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~---~~vkL~DFGl 750 (824)
+||||+++++|.+.+.. ...+++..+..++.|++.||.|||++ +|+||||||+||+++.+ +.+||+|||+
T Consensus 98 lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~ 170 (287)
T 2wei_A 98 IVGELYTGGELFDEIIK----RKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGL 170 (287)
T ss_dssp EEECCCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECSTTG
T ss_pred EEEEccCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEeccCc
Confidence 99999999999988743 34688999999999999999999998 99999999999999754 4799999999
Q ss_pred cccccCCCCceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCCCc
Q 003385 751 SKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEK 809 (824)
Q Consensus 751 a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~~~ 809 (824)
+........ .....||+.|+|||.+.+ .++.++|||||||++|+|++|+.||.+..
T Consensus 171 ~~~~~~~~~--~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~ 226 (287)
T 2wei_A 171 STCFQQNTK--MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKN 226 (287)
T ss_dssp GGTBCCCSS--CSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred ceeecCCCc--cccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCC
Confidence 876543322 223348899999998765 58999999999999999999999997643
No 227
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=99.97 E-value=1.2e-31 Score=290.66 Aligned_cols=201 Identities=25% Similarity=0.395 Sum_probs=164.1
Q ss_pred HHHHHHHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCCc------ccchhhhHHHHHHhhc----CCCccceeece
Q 003385 597 DIEDATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY------QGKREFTNEVTLLSRI----HHRNLVQFLGY 665 (824)
Q Consensus 597 ~~~~~~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~------~~~~~~~~Ei~il~~l----~HpnIv~l~~~ 665 (824)
+.....|.+.+.||+|+||.||+|++. +++.||||+++.... .....+.+|++++.++ +||||++++++
T Consensus 27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~ 106 (312)
T 2iwi_A 27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDW 106 (312)
T ss_dssp ------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEE
T ss_pred hhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEE
Confidence 444567888899999999999999875 688999999975432 2345677899999999 89999999999
Q ss_pred eecCCeEEEEEEe-cCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEc-CCCcE
Q 003385 666 CQEEGRSVLVYEF-MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLD-KHMRA 743 (824)
Q Consensus 666 ~~~~~~~~lV~E~-~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~-~~~~v 743 (824)
+...+..++|+|+ +.+++|.+++.. ...+++..+..++.|++.||+|||++ +|+||||||+||+++ .++.+
T Consensus 107 ~~~~~~~~~v~e~~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~ 179 (312)
T 2iwi_A 107 FETQEGFMLVLERPLPAQDLFDYITE----KGPLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDLRRGCA 179 (312)
T ss_dssp C-----CEEEEECCSSEEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEETTTTEE
T ss_pred EecCCeEEEEEEecCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeCCCCeE
Confidence 9998899999999 789999999853 34588999999999999999999998 999999999999999 78999
Q ss_pred EEEecCCcccccCCCCceeccccCCCCCcchhccccCCCC-chHHHHHHHHHHHHHHcCCCCCCC
Q 003385 744 KVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLT-DKSDVYSFGVILLELISGQEAISN 807 (824)
Q Consensus 744 kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~-~~~DIwSlGvil~elltG~~Pf~~ 807 (824)
||+|||+++...... .....|+..|+|||++.+..+. .++|||||||++|||++|+.||..
T Consensus 180 kl~dfg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 241 (312)
T 2iwi_A 180 KLIDFGSGALLHDEP---YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFER 241 (312)
T ss_dssp EECCCSSCEECCSSC---BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCS
T ss_pred EEEEcchhhhcccCc---ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCC
Confidence 999999998654322 2344589999999999877765 489999999999999999999975
No 228
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=99.97 E-value=7.6e-32 Score=288.62 Aligned_cols=202 Identities=29% Similarity=0.455 Sum_probs=161.5
Q ss_pred HHHHhhccccccCcEEEEEEEEc--CCc--EEEEEEeccCC---cccchhhhHHHHHHhhcCCCccceeeceeecCCeEE
Q 003385 601 ATKMLEKKIGSGGFGVVYYGKLK--DGK--EIAVKVLTSNS---YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSV 673 (824)
Q Consensus 601 ~~~~i~~~LG~G~fg~Vy~a~~~--~g~--~vAVK~l~~~~---~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 673 (824)
..|.+.+.||+|+||.||+|++. +++ .||||+++... ....+.+.+|++++++++||||+++++++.+.. .+
T Consensus 18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~ 96 (291)
T 1u46_A 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MK 96 (291)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CE
T ss_pred hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ce
Confidence 35667889999999999999864 233 68999987542 223467889999999999999999999998765 78
Q ss_pred EEEEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCccc
Q 003385 674 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKF 753 (824)
Q Consensus 674 lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~ 753 (824)
+|+||+++++|.+++... ...+++..+..++.|++.||.|||++ +|+||||||+||+++.++.+||+|||+++.
T Consensus 97 ~v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~ 170 (291)
T 1u46_A 97 MVTELAPLGSLLDRLRKH---QGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRA 170 (291)
T ss_dssp EEEECCTTCBHHHHHHHH---GGGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEE
T ss_pred eeEecccCCCHHHHHHhc---cCCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEcccccccc
Confidence 999999999999998542 34588999999999999999999998 999999999999999999999999999986
Q ss_pred ccCCCCc--eeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHc-CCCCCCCCc
Q 003385 754 AVDGASH--VSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEK 809 (824)
Q Consensus 754 ~~~~~~~--~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~ellt-G~~Pf~~~~ 809 (824)
....... ......+|..|+|||.+....++.++|||||||++|||++ |+.||.+..
T Consensus 171 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~ 229 (291)
T 1u46_A 171 LPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLN 229 (291)
T ss_dssp CCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCC
T ss_pred ccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCC
Confidence 6443322 1233457889999999998889999999999999999999 999997644
No 229
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=99.97 E-value=1.2e-31 Score=292.46 Aligned_cols=198 Identities=23% Similarity=0.379 Sum_probs=170.1
Q ss_pred HHHHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCCcc------cchhhhHHHHHHhhcC--CCccceeeceeecCC
Q 003385 600 DATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ------GKREFTNEVTLLSRIH--HRNLVQFLGYCQEEG 670 (824)
Q Consensus 600 ~~~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~~------~~~~~~~Ei~il~~l~--HpnIv~l~~~~~~~~ 670 (824)
...|.+.+.||+|+||.||+|++. +++.||||+++..... ..+.+.+|++++++++ ||||+++++++.+.+
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~ 121 (320)
T 3a99_A 42 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPD 121 (320)
T ss_dssp TTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSS
T ss_pred cCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCC
Confidence 345677899999999999999875 6889999999754322 2356788999999996 599999999999999
Q ss_pred eEEEEEEecCC-CCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEc-CCCcEEEEec
Q 003385 671 RSVLVYEFMHN-GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLD-KHMRAKVSDF 748 (824)
Q Consensus 671 ~~~lV~E~~~~-gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~-~~~~vkL~DF 748 (824)
..++|+|++.+ ++|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++ +++.+||+||
T Consensus 122 ~~~lv~e~~~~~~~L~~~l~~----~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~kL~Df 194 (320)
T 3a99_A 122 SFVLILERPEPVQDLFDFITE----RGALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDF 194 (320)
T ss_dssp EEEEEEECCSSEEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCC
T ss_pred cEEEEEEcCCCCccHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCCCCEEEeeC
Confidence 99999999986 899998853 35688999999999999999999998 999999999999999 6799999999
Q ss_pred CCcccccCCCCceeccccCCCCCcchhccccCCC-CchHHHHHHHHHHHHHHcCCCCCCC
Q 003385 749 GLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQL-TDKSDVYSFGVILLELISGQEAISN 807 (824)
Q Consensus 749 Gla~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~-~~~~DIwSlGvil~elltG~~Pf~~ 807 (824)
|+++...... .....||+.|+|||++....+ +.++|||||||++|||++|+.||..
T Consensus 195 g~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~ 251 (320)
T 3a99_A 195 GSGALLKDTV---YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 251 (320)
T ss_dssp TTCEECCSSC---BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCS
T ss_pred cccccccccc---ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCC
Confidence 9998654322 233468999999999987776 6788999999999999999999975
No 230
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=99.97 E-value=1.3e-31 Score=295.91 Aligned_cols=202 Identities=25% Similarity=0.399 Sum_probs=166.3
Q ss_pred HHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCCc--ccchhhhHHHHHHhhcCCCccceeeceeecCCe------E
Q 003385 602 TKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY--QGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGR------S 672 (824)
Q Consensus 602 ~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~--~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~------~ 672 (824)
.|.+.+.||+|+||.||+|.++ +|+.||||++..... ...+.+.+|+.++++++||||+++++++...+. .
T Consensus 25 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 104 (353)
T 3coi_A 25 TYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDF 104 (353)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCC
T ss_pred eEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccceeE
Confidence 3556789999999999999876 689999999965422 224568899999999999999999999877643 4
Q ss_pred EEEEEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcc
Q 003385 673 VLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSK 752 (824)
Q Consensus 673 ~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~ 752 (824)
++||||++ ++|.+.+. ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++
T Consensus 105 ~lv~e~~~-~~l~~~~~------~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~ 174 (353)
T 3coi_A 105 YLVMPFMQ-TDLQKIMG------LKFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLAR 174 (353)
T ss_dssp EEEEECCS-EEGGGTTT------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTTCTT
T ss_pred EEEecccc-CCHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeeccccc
Confidence 99999997 57777662 3488899999999999999999998 99999999999999999999999999987
Q ss_pred cccCCCCceeccccCCCCCcchhcccc-CCCCchHHHHHHHHHHHHHHcCCCCCCCCccccchhcH
Q 003385 753 FAVDGASHVSSIVRGTVGYLDPEYYIS-QQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNI 817 (824)
Q Consensus 753 ~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~~DIwSlGvil~elltG~~Pf~~~~~~~~~~~i 817 (824)
..... .....||+.|+|||.+.+ ..++.++|||||||++|||++|+.||.+....+....+
T Consensus 175 ~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i 236 (353)
T 3coi_A 175 HADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQI 236 (353)
T ss_dssp C------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHH
T ss_pred CCCCC----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 54322 233468999999999887 67899999999999999999999999886644433333
No 231
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=99.97 E-value=8.2e-32 Score=294.91 Aligned_cols=197 Identities=30% Similarity=0.516 Sum_probs=155.5
Q ss_pred HHHhhccccccCcEEEEEEEEcCCcEEEEEEeccCCcccchhhhHHHHH--HhhcCCCccceeeceee-----cCCeEEE
Q 003385 602 TKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTL--LSRIHHRNLVQFLGYCQ-----EEGRSVL 674 (824)
Q Consensus 602 ~~~i~~~LG~G~fg~Vy~a~~~~g~~vAVK~l~~~~~~~~~~~~~Ei~i--l~~l~HpnIv~l~~~~~-----~~~~~~l 674 (824)
.|.+.+.||+|+||.||+|++ +++.||||+++... ...+..|.++ +..++||||+++++.+. .....++
T Consensus 14 ~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~l 89 (336)
T 3g2f_A 14 NLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLL 89 (336)
T ss_dssp SEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEE
T ss_pred HhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEE
Confidence 345678999999999999987 58999999986432 2334444444 45589999999997542 2346789
Q ss_pred EEEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCC------CCCeEecCCCCCCEEEcCCCcEEEEec
Q 003385 675 VYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGC------VPAIIHRDLKSSNILLDKHMRAKVSDF 748 (824)
Q Consensus 675 V~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~------~~gIvHrDLkp~NILl~~~~~vkL~DF 748 (824)
||||+++|+|.+++.. ...++..+..++.|++.||+|||+.+ .++|+||||||+|||++.++.+||+||
T Consensus 90 v~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DF 164 (336)
T 3g2f_A 90 VMEYYPNGSLXKYLSL-----HTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDF 164 (336)
T ss_dssp EECCCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCC
T ss_pred EEecCCCCcHHHHHhh-----cccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeec
Confidence 9999999999999843 33478889999999999999999852 228999999999999999999999999
Q ss_pred CCcccccCCC-------CceeccccCCCCCcchhcccc-------CCCCchHHHHHHHHHHHHHHcCCCCCCC
Q 003385 749 GLSKFAVDGA-------SHVSSIVRGTVGYLDPEYYIS-------QQLTDKSDVYSFGVILLELISGQEAISN 807 (824)
Q Consensus 749 Gla~~~~~~~-------~~~~~~~~gt~~y~aPE~l~~-------~~~~~~~DIwSlGvil~elltG~~Pf~~ 807 (824)
|+++...... ........||+.|+|||++.+ ..++.++|||||||++|||++|..||..
T Consensus 165 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~ 237 (336)
T 3g2f_A 165 GLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFP 237 (336)
T ss_dssp TTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGST
T ss_pred cceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCC
Confidence 9997654321 112234469999999999876 3556789999999999999999777643
No 232
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=99.97 E-value=1.7e-31 Score=293.92 Aligned_cols=205 Identities=22% Similarity=0.350 Sum_probs=171.6
Q ss_pred HHHHHHHHHhhccccccCcEEEEEEEEc-CC-cEEEEEEeccCCcccchhhhHHHHHHhhcCCCc------cceeeceee
Q 003385 596 SDIEDATKMLEKKIGSGGFGVVYYGKLK-DG-KEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRN------LVQFLGYCQ 667 (824)
Q Consensus 596 ~~~~~~~~~i~~~LG~G~fg~Vy~a~~~-~g-~~vAVK~l~~~~~~~~~~~~~Ei~il~~l~Hpn------Iv~l~~~~~ 667 (824)
++.....|.+.+.||+|+||.||+|... ++ +.||+|+++... ...+.+.+|++++++++|++ ++.+.+++.
T Consensus 14 g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~ 92 (355)
T 2eu9_A 14 GDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVG-KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFN 92 (355)
T ss_dssp TCEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEE
T ss_pred CceecccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccc-cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeee
Confidence 3344456778899999999999999875 34 689999997432 33567888999999998766 899999999
Q ss_pred cCCeEEEEEEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEE----------
Q 003385 668 EEGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILL---------- 737 (824)
Q Consensus 668 ~~~~~~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl---------- 737 (824)
..+..++||||+ ++++.+.+... ....+++..+..++.||+.||+|||++ +|+||||||+|||+
T Consensus 93 ~~~~~~lv~e~~-~~~l~~~l~~~--~~~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~ 166 (355)
T 2eu9_A 93 FHGHMCIAFELL-GKNTFEFLKEN--NFQPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYN 166 (355)
T ss_dssp ETTEEEEEEECC-CCBHHHHHHHT--TTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEEEC
T ss_pred eCCeEEEEEecc-CCChHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeccccccccc
Confidence 999999999999 56777766432 234688999999999999999999998 99999999999999
Q ss_pred ---------cCCCcEEEEecCCcccccCCCCceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCCC
Q 003385 738 ---------DKHMRAKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNE 808 (824)
Q Consensus 738 ---------~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~~ 808 (824)
+.++.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||.+.
T Consensus 167 ~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 242 (355)
T 2eu9_A 167 EHKSCEEKSVKNTSIRVADFGSATFDHEH----HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTH 242 (355)
T ss_dssp CC-CCCEEEESCCCEEECCCTTCEETTSC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccccccccccCCCcEEEeecCcccccccc----ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCC
Confidence 56789999999999764332 23346899999999999999999999999999999999999999876
Q ss_pred ccc
Q 003385 809 KFG 811 (824)
Q Consensus 809 ~~~ 811 (824)
...
T Consensus 243 ~~~ 245 (355)
T 2eu9_A 243 ENR 245 (355)
T ss_dssp SHH
T ss_pred CHH
Confidence 533
No 233
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=99.97 E-value=3.4e-31 Score=296.17 Aligned_cols=210 Identities=25% Similarity=0.291 Sum_probs=172.8
Q ss_pred HHHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCCcccchhhhHHHHHHhhcC-CC-----ccceeeceeecCCeEE
Q 003385 601 ATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIH-HR-----NLVQFLGYCQEEGRSV 673 (824)
Q Consensus 601 ~~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~~~~~~~~~Ei~il~~l~-Hp-----nIv~l~~~~~~~~~~~ 673 (824)
..|.+.+.||+|+||.||+|+++ +++.||||+++... ...+.+..|+++++.++ |+ +|+++++++...+..+
T Consensus 54 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~ 132 (382)
T 2vx3_A 54 DRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK-AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLC 132 (382)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEEE
T ss_pred eeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH-HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCceE
Confidence 35667899999999999999876 67889999997432 23456778899888885 55 4999999999999999
Q ss_pred EEEEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEc--CCCcEEEEecCCc
Q 003385 674 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLD--KHMRAKVSDFGLS 751 (824)
Q Consensus 674 lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~--~~~~vkL~DFGla 751 (824)
+||||++ ++|.+++... ....+++..+..++.|++.||.|||++ ..+|+||||||+|||++ .++.+||+|||++
T Consensus 133 lv~e~~~-~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a 208 (382)
T 2vx3_A 133 LVFEMLS-YNLYDLLRNT--NFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFGSS 208 (382)
T ss_dssp EEEECCC-CBHHHHHHHT--TTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCCTTC
T ss_pred EEEecCC-CCHHHHHhhc--CcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEeccCc
Confidence 9999996 5999988543 224588999999999999999999952 13999999999999995 4678999999999
Q ss_pred ccccCCCCceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCCCccccchhcHhh
Q 003385 752 KFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQ 819 (824)
Q Consensus 752 ~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~~~~~~~~~~iv~ 819 (824)
+..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||.+....+....+++
T Consensus 209 ~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~ 272 (382)
T 2vx3_A 209 CQLGQR----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVE 272 (382)
T ss_dssp EETTCC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred eecccc----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 865432 2335689999999999999999999999999999999999999998765544444443
No 234
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.97 E-value=9.3e-32 Score=295.06 Aligned_cols=193 Identities=20% Similarity=0.241 Sum_probs=159.6
Q ss_pred HHHHHHhhccccccCcEEEEEEEEcCCcEEEEEEeccCCc--------ccchhhhHHHHHHhhcC---------------
Q 003385 599 EDATKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSY--------QGKREFTNEVTLLSRIH--------------- 655 (824)
Q Consensus 599 ~~~~~~i~~~LG~G~fg~Vy~a~~~~g~~vAVK~l~~~~~--------~~~~~~~~Ei~il~~l~--------------- 655 (824)
....|.+.+.||+|+||+||+|++ +|+.||||+++.... ...+.+.+|+++++.++
T Consensus 18 ~~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~ 96 (336)
T 2vuw_A 18 PTEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIG 96 (336)
T ss_dssp CHHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCC
T ss_pred ccccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhh
Confidence 356778899999999999999998 589999999975432 12266889999999886
Q ss_pred -----------CCccceeeceeec-------------CCeEEEEEEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHH
Q 003385 656 -----------HRNLVQFLGYCQE-------------EGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAA 711 (824)
Q Consensus 656 -----------HpnIv~l~~~~~~-------------~~~~~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia 711 (824)
||||+++++++.+ .+..++||||+++|++.+.+. ...+++..+..++.||+
T Consensus 97 l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~-----~~~~~~~~~~~i~~qi~ 171 (336)
T 2vuw_A 97 LNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMR-----TKLSSLATAKSILHQLT 171 (336)
T ss_dssp EEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGT-----TTCCCHHHHHHHHHHHH
T ss_pred hcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHH-----hcCCCHHHHHHHHHHHH
Confidence 5555555555554 678999999999997766652 24578999999999999
Q ss_pred HHHHHHH-hCCCCCeEecCCCCCCEEEcCCC--------------------cEEEEecCCcccccCCCCceeccccCCCC
Q 003385 712 KGIEYLH-TGCVPAIIHRDLKSSNILLDKHM--------------------RAKVSDFGLSKFAVDGASHVSSIVRGTVG 770 (824)
Q Consensus 712 ~gL~yLH-~~~~~gIvHrDLkp~NILl~~~~--------------------~vkL~DFGla~~~~~~~~~~~~~~~gt~~ 770 (824)
.||+||| ++ +|+||||||+|||++.++ .+||+|||+|+..... ..+||+.
T Consensus 172 ~aL~~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~------~~~gt~~ 242 (336)
T 2vuw_A 172 ASLAVAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG------IVVFCDV 242 (336)
T ss_dssp HHHHHHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT------EEECCCC
T ss_pred HHHHHHHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC------cEEEeec
Confidence 9999999 87 999999999999999887 8999999999866432 2369999
Q ss_pred CcchhccccCCCCchHHHHHHHHH-HHHHHcCCCCCCC
Q 003385 771 YLDPEYYISQQLTDKSDVYSFGVI-LLELISGQEAISN 807 (824)
Q Consensus 771 y~aPE~l~~~~~~~~~DIwSlGvi-l~elltG~~Pf~~ 807 (824)
|+|||++.+.. +.++||||+|++ .+++++|..||.+
T Consensus 243 y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~ 279 (336)
T 2vuw_A 243 SMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSN 279 (336)
T ss_dssp TTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHH
T ss_pred ccChhhhcCCC-ccceehhhhhCCCCcccccccCCCcc
Confidence 99999998666 889999998777 7889999999854
No 235
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=99.97 E-value=2.8e-31 Score=316.87 Aligned_cols=203 Identities=24% Similarity=0.392 Sum_probs=168.6
Q ss_pred HHHHHhhccccccCcEEEEEEEEcC----CcEEEEEEeccCC-cccchhhhHHHHHHhhcCCCccceeeceeecCCeEEE
Q 003385 600 DATKMLEKKIGSGGFGVVYYGKLKD----GKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVL 674 (824)
Q Consensus 600 ~~~~~i~~~LG~G~fg~Vy~a~~~~----g~~vAVK~l~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~l 674 (824)
...+.+.+.||+|+||.||+|.+.. +..||||+++... ....+.+.+|+.++++++||||+++++++.+ +..++
T Consensus 389 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~-~~~~l 467 (656)
T 2j0j_A 389 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWI 467 (656)
T ss_dssp GGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEE
T ss_pred cccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec-CceEE
Confidence 3456678899999999999998753 4579999987543 2334678899999999999999999999854 56799
Q ss_pred EEEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccc
Q 003385 675 VYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFA 754 (824)
Q Consensus 675 V~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~ 754 (824)
||||+++|+|.+++... ...+++..++.++.|++.||.|||++ +|+||||||+|||++.++.+||+|||+++..
T Consensus 468 v~E~~~~g~L~~~l~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~DFG~a~~~ 541 (656)
T 2j0j_A 468 IMELCTLGELRSFLQVR---KFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 541 (656)
T ss_dssp EEECCTTCBHHHHHHHT---TTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCCCCSC
T ss_pred EEEcCCCCcHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEecCCCeec
Confidence 99999999999998532 34588999999999999999999998 9999999999999999999999999999876
Q ss_pred cCCCCceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHc-CCCCCCCCc
Q 003385 755 VDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELIS-GQEAISNEK 809 (824)
Q Consensus 755 ~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~ellt-G~~Pf~~~~ 809 (824)
............+|+.|+|||++....++.++|||||||++|||++ |..||.+..
T Consensus 542 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~ 597 (656)
T 2j0j_A 542 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVK 597 (656)
T ss_dssp CC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC
T ss_pred CCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCC
Confidence 5443333334457889999999999999999999999999999997 999998654
No 236
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.97 E-value=4e-33 Score=300.16 Aligned_cols=194 Identities=29% Similarity=0.492 Sum_probs=149.9
Q ss_pred HHHhhccccccCcEEEEEEEEcCCcEEEEEEeccCCcccchhhhHHHHHHhh--cCCCccceeeceeecCC----eEEEE
Q 003385 602 TKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSR--IHHRNLVQFLGYCQEEG----RSVLV 675 (824)
Q Consensus 602 ~~~i~~~LG~G~fg~Vy~a~~~~g~~vAVK~l~~~~~~~~~~~~~Ei~il~~--l~HpnIv~l~~~~~~~~----~~~lV 675 (824)
.|.+.+.||+|+||.||+|++. ++.||||+++.. ..+.+.+|.+++.. ++||||+++++++.... ..++|
T Consensus 4 ~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv 79 (303)
T 3gxj_A 4 TIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV 79 (303)
T ss_dssp GCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-T---THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEEE
T ss_pred eeeehhhccCCCCeEEEEEEEc-CcceEEEEeccc---chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEEE
Confidence 4567889999999999999876 899999998643 24567778888887 78999999999998776 78999
Q ss_pred EEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHH--------hCCCCCeEecCCCCCCEEEcCCCcEEEEe
Q 003385 676 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLH--------TGCVPAIIHRDLKSSNILLDKHMRAKVSD 747 (824)
Q Consensus 676 ~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH--------~~~~~gIvHrDLkp~NILl~~~~~vkL~D 747 (824)
|||+++|+|.+++.. ..+++..+..++.|++.||.||| +. +|+||||||+|||++.++.+||+|
T Consensus 80 ~e~~~~g~L~~~l~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nil~~~~~~~kl~D 151 (303)
T 3gxj_A 80 SDYHEHGSLFDYLNR-----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGTCCIAD 151 (303)
T ss_dssp EECCTTCCHHHHHHH-----CCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC-BCC
T ss_pred EeccCCCCHHHHHhc-----cCcchHHHHHHHHHHHHHHHHHHHHHhhhccCC---CEeeCcCCHHHeEECCCCCEEEee
Confidence 999999999999843 34667778899999999999999 76 999999999999999999999999
Q ss_pred cCCcccccCCCCce---eccccCCCCCcchhccccC------CCCchHHHHHHHHHHHHHHcC----------CCCCCC
Q 003385 748 FGLSKFAVDGASHV---SSIVRGTVGYLDPEYYISQ------QLTDKSDVYSFGVILLELISG----------QEAISN 807 (824)
Q Consensus 748 FGla~~~~~~~~~~---~~~~~gt~~y~aPE~l~~~------~~~~~~DIwSlGvil~elltG----------~~Pf~~ 807 (824)
||+++......... .....||+.|+|||++... .++.++|||||||++|||++| +.||..
T Consensus 152 Fg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~ 230 (303)
T 3gxj_A 152 LGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYD 230 (303)
T ss_dssp CCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTT
T ss_pred cCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccc
Confidence 99997654433221 2334699999999998766 334689999999999999999 777754
No 237
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=99.97 E-value=2.9e-31 Score=288.13 Aligned_cols=199 Identities=27% Similarity=0.440 Sum_probs=164.3
Q ss_pred HHHhhccccccCcEEEEEEEEcCCcEEEEEEeccCC--cccchhhhHHHHHHhhcCCCccceeeceeecCCeEEEEEEec
Q 003385 602 TKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 679 (824)
Q Consensus 602 ~~~i~~~LG~G~fg~Vy~a~~~~g~~vAVK~l~~~~--~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~ 679 (824)
.+.+.+.||+|+||.||+|+++. .+|+|+++... ....+.+.+|+.++++++||||+++++++.+.+..++||||+
T Consensus 34 ~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e~~ 111 (319)
T 2y4i_B 34 QLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLC 111 (319)
T ss_dssp CEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECBCC
T ss_pred HeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEeecc
Confidence 45677899999999999998863 59999987542 233467889999999999999999999999999999999999
Q ss_pred CCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccccCC--
Q 003385 680 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDG-- 757 (824)
Q Consensus 680 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~~~-- 757 (824)
++++|.+++... ...+++..+..++.|++.||+|||++ +|+||||||+||+++ ++.+||+|||+++.....
T Consensus 112 ~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~ 184 (319)
T 2y4i_B 112 KGRTLYSVVRDA---KIVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQA 184 (319)
T ss_dssp CSEEHHHHTTSS---CCCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCCSCCC-------
T ss_pred cCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeecCCccccccccc
Confidence 999999998532 34578899999999999999999998 999999999999998 679999999998654221
Q ss_pred --CCceeccccCCCCCcchhcccc---------CCCCchHHHHHHHHHHHHHHcCCCCCCCCc
Q 003385 758 --ASHVSSIVRGTVGYLDPEYYIS---------QQLTDKSDVYSFGVILLELISGQEAISNEK 809 (824)
Q Consensus 758 --~~~~~~~~~gt~~y~aPE~l~~---------~~~~~~~DIwSlGvil~elltG~~Pf~~~~ 809 (824)
.........|++.|+|||.+.. ..++.++|||||||++|||++|+.||....
T Consensus 185 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~ 247 (319)
T 2y4i_B 185 GRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQP 247 (319)
T ss_dssp ---CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCC
T ss_pred cccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 1112233458999999999874 457889999999999999999999997644
No 238
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=99.97 E-value=1.1e-30 Score=280.51 Aligned_cols=193 Identities=26% Similarity=0.416 Sum_probs=158.4
Q ss_pred HHHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCCcccchhhhHHHHHHhhcCCCccceeeceeec-----------
Q 003385 601 ATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQE----------- 668 (824)
Q Consensus 601 ~~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~----------- 668 (824)
..|.+.+.||+|+||.||+|++. +++.||||+++... ...+.+.+|++++++++||||+++++++.+
T Consensus 6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 84 (303)
T 1zy4_A 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE-EKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAV 84 (303)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEH-HHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC-----
T ss_pred ccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccH-HHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhccc
Confidence 45667899999999999999975 78999999986432 334678899999999999999999998754
Q ss_pred --CCeEEEEEEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEE
Q 003385 669 --EGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVS 746 (824)
Q Consensus 669 --~~~~~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~ 746 (824)
.+..++||||+++++|.+++... ...+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+
T Consensus 85 ~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~~kl~ 158 (303)
T 1zy4_A 85 KKKSTLFIQMEYCENGTLYDLIHSE---NLNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIG 158 (303)
T ss_dssp -CEEEEEEEEECCCSCBHHHHHHHS---CGGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEEC
T ss_pred ccCCceEEEEecCCCCCHHHhhhcc---ccccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCCEEEe
Confidence 45679999999999999998642 34567888899999999999999998 99999999999999999999999
Q ss_pred ecCCcccccCCC-------------CceeccccCCCCCcchhccccC-CCCchHHHHHHHHHHHHHHc
Q 003385 747 DFGLSKFAVDGA-------------SHVSSIVRGTVGYLDPEYYISQ-QLTDKSDVYSFGVILLELIS 800 (824)
Q Consensus 747 DFGla~~~~~~~-------------~~~~~~~~gt~~y~aPE~l~~~-~~~~~~DIwSlGvil~ellt 800 (824)
|||+++...... ........||+.|+|||++.+. .++.++|||||||++|||++
T Consensus 159 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~ 226 (303)
T 1zy4_A 159 DFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY 226 (303)
T ss_dssp CCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS
T ss_pred eCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh
Confidence 999987653221 1122344689999999998764 68999999999999999998
No 239
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=99.97 E-value=5.1e-31 Score=299.97 Aligned_cols=197 Identities=26% Similarity=0.396 Sum_probs=155.0
Q ss_pred hhccccccCcEEEEEEEEcCCcEEEEEEeccCCcccchhhhHHHHHHhhc-CCCccceeeceeecCCeEEEEEEecCCCC
Q 003385 605 LEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVYEFMHNGT 683 (824)
Q Consensus 605 i~~~LG~G~fg~Vy~a~~~~g~~vAVK~l~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~lV~E~~~~gs 683 (824)
+.+.||+|+||+||.+...+|+.||||++.... .+.+.+|+++++++ +||||+++++++.+.+..++||||++ |+
T Consensus 19 ~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-gs 94 (434)
T 2rio_A 19 SEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF---CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-LN 94 (434)
T ss_dssp EEEEEEECSTTCEEEEEESSSSEEEEEEEEGGG---HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-EE
T ss_pred ccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-CC
Confidence 457899999999988777789999999986432 34577899999886 89999999999999999999999996 69
Q ss_pred HHHHhhcccCcccc---CCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCC-------------CcEEEEe
Q 003385 684 LKEHLYGTLTHEQR---INWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKH-------------MRAKVSD 747 (824)
Q Consensus 684 L~~~L~~~~~~~~~---l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~-------------~~vkL~D 747 (824)
|.+++......... ..+..++.++.||+.||+|||++ +|+||||||+|||++.+ +.+||+|
T Consensus 95 L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~D 171 (434)
T 2rio_A 95 LQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISD 171 (434)
T ss_dssp HHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECC
T ss_pred HHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCCCceEEEEcc
Confidence 99998653222111 13334577999999999999998 99999999999999754 4899999
Q ss_pred cCCcccccCCCCc---eeccccCCCCCcchhcccc-------CCCCchHHHHHHHHHHHHHHc-CCCCCCCC
Q 003385 748 FGLSKFAVDGASH---VSSIVRGTVGYLDPEYYIS-------QQLTDKSDVYSFGVILLELIS-GQEAISNE 808 (824)
Q Consensus 748 FGla~~~~~~~~~---~~~~~~gt~~y~aPE~l~~-------~~~~~~~DIwSlGvil~ellt-G~~Pf~~~ 808 (824)
||+++........ ......||+.|+|||++.+ ..++.++|||||||++|||++ |+.||.+.
T Consensus 172 FG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~ 243 (434)
T 2rio_A 172 FGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDK 243 (434)
T ss_dssp CTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCST
T ss_pred cccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCc
Confidence 9999876543221 1234569999999999875 678999999999999999999 99999754
No 240
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=99.97 E-value=9.1e-31 Score=283.97 Aligned_cols=199 Identities=25% Similarity=0.363 Sum_probs=164.1
Q ss_pred HHHHhhccccccCcEEEEEEEEcCCcEEEEEEeccCC--cccchhhhHHHHHHhhcC--CCccceeeceeecCCeEEEEE
Q 003385 601 ATKMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNS--YQGKREFTNEVTLLSRIH--HRNLVQFLGYCQEEGRSVLVY 676 (824)
Q Consensus 601 ~~~~i~~~LG~G~fg~Vy~a~~~~g~~vAVK~l~~~~--~~~~~~~~~Ei~il~~l~--HpnIv~l~~~~~~~~~~~lV~ 676 (824)
..|.+.+.||+|+||.||+|..++++.||||++.... ....+.+.+|++++++++ ||||+++++++.+.+..++||
T Consensus 28 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 107 (313)
T 3cek_A 28 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 107 (313)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEEE
T ss_pred ceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEEE
Confidence 3466788999999999999998889999999997543 223467889999999997 599999999999999999999
Q ss_pred EecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccccC
Q 003385 677 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVD 756 (824)
Q Consensus 677 E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~~ 756 (824)
| +.+++|.+++.. ...+++..+..++.|+++||.|||++ +|+||||||+|||++ ++.+||+|||+++....
T Consensus 108 e-~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~-~~~~kL~Dfg~~~~~~~ 178 (313)
T 3cek_A 108 E-CGNIDLNSWLKK----KKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQP 178 (313)
T ss_dssp C-CCSEEHHHHHHH----CSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCC---
T ss_pred e-cCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEE-CCeEEEeeccccccccC
Confidence 9 667899999853 34678899999999999999999998 999999999999996 48999999999986543
Q ss_pred CCCc-eeccccCCCCCcchhcccc-----------CCCCchHHHHHHHHHHHHHHcCCCCCCCC
Q 003385 757 GASH-VSSIVRGTVGYLDPEYYIS-----------QQLTDKSDVYSFGVILLELISGQEAISNE 808 (824)
Q Consensus 757 ~~~~-~~~~~~gt~~y~aPE~l~~-----------~~~~~~~DIwSlGvil~elltG~~Pf~~~ 808 (824)
.... ......||+.|+|||.+.. ..++.++|||||||++|||++|+.||...
T Consensus 179 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 242 (313)
T 3cek_A 179 DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI 242 (313)
T ss_dssp -----------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred ccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhH
Confidence 3221 2234468999999999875 46888999999999999999999999753
No 241
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=99.97 E-value=1e-30 Score=285.46 Aligned_cols=200 Identities=28% Similarity=0.365 Sum_probs=147.1
Q ss_pred HHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCCc-ccchhhhHHHH-HHhhcCCCccceeeceeecCCeEEEEEEec
Q 003385 603 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY-QGKREFTNEVT-LLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 679 (824)
Q Consensus 603 ~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~-~~~~~~~~Ei~-il~~l~HpnIv~l~~~~~~~~~~~lV~E~~ 679 (824)
+.+.+.||+|+||.||+|.++ +++.||||+++.... ....++..|+. +++.++||||+++++++.+.+..++||||+
T Consensus 24 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e~~ 103 (327)
T 3aln_A 24 LKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELM 103 (327)
T ss_dssp EEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred hhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEeec
Confidence 445688999999999999986 688999999975432 22344555555 677789999999999999999999999999
Q ss_pred CCCCHHHHhhccc-CccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccccCCC
Q 003385 680 HNGTLKEHLYGTL-THEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 758 (824)
Q Consensus 680 ~~gsL~~~L~~~~-~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~ 758 (824)
++ +|.+++.... .....+++..+..++.|++.||.|||+. .+|+||||||+|||++.++.+||+|||+++......
T Consensus 104 ~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~--~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 180 (327)
T 3aln_A 104 ST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKEN--LKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSI 180 (327)
T ss_dssp SE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHH--HSCCCSCCCGGGEEEETTTEEEECCCSSSCC-----
T ss_pred CC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhcc--CCEeECCCCHHHEEEcCCCCEEEccCCCceeccccc
Confidence 85 7777664211 1245688999999999999999999995 389999999999999999999999999997654322
Q ss_pred CceeccccCCCCCcchhcc----ccCCCCchHHHHHHHHHHHHHHcCCCCCCC
Q 003385 759 SHVSSIVRGTVGYLDPEYY----ISQQLTDKSDVYSFGVILLELISGQEAISN 807 (824)
Q Consensus 759 ~~~~~~~~gt~~y~aPE~l----~~~~~~~~~DIwSlGvil~elltG~~Pf~~ 807 (824)
. .....||+.|+|||.+ .+..++.++|||||||++|||++|+.||.+
T Consensus 181 ~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 231 (327)
T 3aln_A 181 A--KTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPK 231 (327)
T ss_dssp ---------------------------CCSHHHHHHHHHHHHHHHHSCCCSSC
T ss_pred c--cccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence 1 2233589999999998 456789999999999999999999999975
No 242
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=99.97 E-value=9.1e-31 Score=290.66 Aligned_cols=200 Identities=24% Similarity=0.447 Sum_probs=165.8
Q ss_pred HHHHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCCcccchhhhHHHHHHhhcC-----------CCccceeeceee
Q 003385 600 DATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIH-----------HRNLVQFLGYCQ 667 (824)
Q Consensus 600 ~~~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~~~~~~~~~Ei~il~~l~-----------HpnIv~l~~~~~ 667 (824)
...|.+.+.||+|+||.||+|++. +++.||||+++... ...+.+.+|++++++++ ||||+++++++.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~ 96 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN 96 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc-cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence 345677899999999999999875 68899999997432 23466788999999886 899999999987
Q ss_pred cCC----eEEEEEEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEc-----
Q 003385 668 EEG----RSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLD----- 738 (824)
Q Consensus 668 ~~~----~~~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~----- 738 (824)
..+ ..++|||++ +++|.+++... ....+++..+..++.||+.||+|||+++ +|+||||||+|||++
T Consensus 97 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~--~~~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~~~~ 171 (373)
T 1q8y_A 97 HKGPNGVHVVMVFEVL-GENLLALIKKY--EHRGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVDSP 171 (373)
T ss_dssp EEETTEEEEEEEECCC-CEEHHHHHHHT--TTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEETT
T ss_pred ccCCCCceEEEEEecC-CCCHHHHHHHh--hccCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEeccCCC
Confidence 644 789999999 88999988543 2345889999999999999999999952 899999999999995
Q ss_pred -CCCcEEEEecCCcccccCCCCceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCCCc
Q 003385 739 -KHMRAKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEK 809 (824)
Q Consensus 739 -~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~~~ 809 (824)
..+.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||.+..
T Consensus 172 ~~~~~~kl~Dfg~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 239 (373)
T 1q8y_A 172 ENLIQIKIADLGNACWYDEH----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDE 239 (373)
T ss_dssp TTEEEEEECCCTTCEETTBC----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC----
T ss_pred cCcceEEEcccccccccCCC----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCc
Confidence 3348999999999765432 223468999999999999999999999999999999999999998654
No 243
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=99.97 E-value=1.4e-30 Score=286.01 Aligned_cols=195 Identities=23% Similarity=0.319 Sum_probs=142.5
Q ss_pred HHh-hccccccCcEEEEEEEEc-CCcEEEEEEeccCCcccchhhhHHHHHHhhcCCCccceeeceeec----CCeEEEEE
Q 003385 603 KML-EKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNLVQFLGYCQE----EGRSVLVY 676 (824)
Q Consensus 603 ~~i-~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~----~~~~~lV~ 676 (824)
|.+ .+.||+|+||.||+|+++ +++.||||++.... +...+....++.++||||+++++++.. ....++||
T Consensus 30 y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~ 105 (336)
T 3fhr_A 30 YQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP----KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIM 105 (336)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred eEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH----HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEEE
Confidence 444 456999999999999987 68999999986421 222233334566799999999999875 45589999
Q ss_pred EecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcC---CCcEEEEecCCccc
Q 003385 677 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK---HMRAKVSDFGLSKF 753 (824)
Q Consensus 677 E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~---~~~vkL~DFGla~~ 753 (824)
||+++|+|.+++... ....+++..+..++.|++.||.|||++ +|+||||||+|||++. ++.+||+|||+++.
T Consensus 106 e~~~gg~L~~~l~~~--~~~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~ 180 (336)
T 3fhr_A 106 ECMEGGELFSRIQER--GDQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKE 180 (336)
T ss_dssp ECCTTEEHHHHHHTC---CCCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCEE
T ss_pred eccCCCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEecccccee
Confidence 999999999998643 234688999999999999999999998 9999999999999986 45599999999976
Q ss_pred ccCCCCceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCCCc
Q 003385 754 AVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEK 809 (824)
Q Consensus 754 ~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~~~ 809 (824)
.... ......||+.|+|||++....++.++|||||||++|||++|+.||.+..
T Consensus 181 ~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 233 (336)
T 3fhr_A 181 TTQN---ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNT 233 (336)
T ss_dssp C-------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC----
T ss_pred cccc---ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCcc
Confidence 5432 2234568999999999988889999999999999999999999996543
No 244
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=99.97 E-value=2.4e-30 Score=294.14 Aligned_cols=196 Identities=27% Similarity=0.395 Sum_probs=155.8
Q ss_pred HHhhccccccCcEEEEEEEEcCCcEEEEEEeccCCcccchhhhHHHHHHhhc-CCCccceeeceeecCCeEEEEEEecCC
Q 003385 603 KMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLVYEFMHN 681 (824)
Q Consensus 603 ~~i~~~LG~G~fg~Vy~a~~~~g~~vAVK~l~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~lV~E~~~~ 681 (824)
+.+.+.||+|+||+||.....+++.||||++.... ...+.+|+++++++ +||||+++++++.+.+..++||||+.
T Consensus 26 y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~- 101 (432)
T 3p23_A 26 FCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPEC---FSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA- 101 (432)
T ss_dssp EEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTT---EEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS-
T ss_pred EecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC-
Confidence 45568999999999776666789999999986433 34567899999999 79999999999999999999999996
Q ss_pred CCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcC-----CCcEEEEecCCcccccC
Q 003385 682 GTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK-----HMRAKVSDFGLSKFAVD 756 (824)
Q Consensus 682 gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~-----~~~vkL~DFGla~~~~~ 756 (824)
|+|.+++.... .......+..++.||+.||.|||++ +|+||||||+|||++. ...+||+|||+++....
T Consensus 102 g~L~~~l~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~ 175 (432)
T 3p23_A 102 ATLQEYVEQKD---FAHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAV 175 (432)
T ss_dssp EEHHHHHHSSS---CCCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC--
T ss_pred CCHHHHHHhcC---CCccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccC
Confidence 59999886432 2233344568999999999999998 9999999999999953 24688999999986543
Q ss_pred CCC--ceeccccCCCCCcchhccc---cCCCCchHHHHHHHHHHHHHHc-CCCCCCCC
Q 003385 757 GAS--HVSSIVRGTVGYLDPEYYI---SQQLTDKSDVYSFGVILLELIS-GQEAISNE 808 (824)
Q Consensus 757 ~~~--~~~~~~~gt~~y~aPE~l~---~~~~~~~~DIwSlGvil~ellt-G~~Pf~~~ 808 (824)
... .......||+.|+|||++. ...++.++|||||||++|||++ |..||...
T Consensus 176 ~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~ 233 (432)
T 3p23_A 176 GRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKS 233 (432)
T ss_dssp ----------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBST
T ss_pred CCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchh
Confidence 321 1233456999999999997 4667889999999999999999 99999653
No 245
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=99.96 E-value=3.7e-30 Score=279.11 Aligned_cols=196 Identities=28% Similarity=0.358 Sum_probs=147.2
Q ss_pred HHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCCcc-c-chhhhHHHHHHhhcCCCccceeeceeecCCeEEEEEEec
Q 003385 603 KMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ-G-KREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFM 679 (824)
Q Consensus 603 ~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~~-~-~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~ 679 (824)
|.+.+.||+|+||.||+|+++ +++.||||++...... . .+.+.++..+++.++||||+++++++.+.+..++||||+
T Consensus 27 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 106 (318)
T 2dyl_A 27 LENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELM 106 (318)
T ss_dssp EEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCC
T ss_pred ccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEEecc
Confidence 456789999999999999986 6899999999754322 1 233445556788889999999999999999999999999
Q ss_pred CCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHh-CCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccccCCC
Q 003385 680 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHT-GCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGA 758 (824)
Q Consensus 680 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~-~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~ 758 (824)
++.+...... ....+++..+..++.|++.||.|||+ . +|+||||||+||+++.++.+||+|||+++......
T Consensus 107 -~~~~~~l~~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~ 179 (318)
T 2dyl_A 107 -GTCAEKLKKR---MQGPIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDK 179 (318)
T ss_dssp -SEEHHHHHHH---HTSCCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGGGEEECTTSCEEECCCTTC-------
T ss_pred -CCcHHHHHHH---hccCCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHHHEEECCCCCEEEEECCCchhccCCc
Confidence 4455444321 23568899999999999999999998 4 89999999999999999999999999987654322
Q ss_pred CceeccccCCCCCcchhccc-----cCCCCchHHHHHHHHHHHHHHcCCCCCCC
Q 003385 759 SHVSSIVRGTVGYLDPEYYI-----SQQLTDKSDVYSFGVILLELISGQEAISN 807 (824)
Q Consensus 759 ~~~~~~~~gt~~y~aPE~l~-----~~~~~~~~DIwSlGvil~elltG~~Pf~~ 807 (824)
......||+.|+|||.+. ...++.++|||||||++|||++|+.||..
T Consensus 180 --~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 231 (318)
T 2dyl_A 180 --AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKN 231 (318)
T ss_dssp ---------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred --cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCC
Confidence 223345899999999984 55788999999999999999999999976
No 246
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.96 E-value=2.3e-30 Score=311.10 Aligned_cols=193 Identities=22% Similarity=0.357 Sum_probs=164.0
Q ss_pred HHHHHhhccccccCcEEEEEEEEc--CCcEEEEEEeccCC-cccchhhhHHHHHHhhcCCCccceeeceeecCCe-----
Q 003385 600 DATKMLEKKIGSGGFGVVYYGKLK--DGKEIAVKVLTSNS-YQGKREFTNEVTLLSRIHHRNLVQFLGYCQEEGR----- 671 (824)
Q Consensus 600 ~~~~~i~~~LG~G~fg~Vy~a~~~--~g~~vAVK~l~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~----- 671 (824)
...|.+.+.||+|+||.||+|.+. +++.||||++.... ....+.+.+|++++++++||||+++++++...+.
T Consensus 79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 158 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV 158 (681)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence 346778899999999999999986 58999999986432 2334568899999999999999999999987655
Q ss_pred EEEEEEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCc
Q 003385 672 SVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLS 751 (824)
Q Consensus 672 ~~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla 751 (824)
.++||||+++++|.+++. ..+++..++.++.||+.||.|||++ +|+||||||+|||++.+ .+||+|||++
T Consensus 159 ~~lv~E~~~g~~L~~~~~------~~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG~a 228 (681)
T 2pzi_A 159 GYIVMEYVGGQSLKRSKG------QKLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLGAV 228 (681)
T ss_dssp EEEEEECCCCEECC----------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCTTC
T ss_pred eEEEEEeCCCCcHHHHHh------CCCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEecccc
Confidence 799999999999987663 2688999999999999999999998 99999999999999986 8999999999
Q ss_pred ccccCCCCceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCCC
Q 003385 752 KFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNE 808 (824)
Q Consensus 752 ~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~~ 808 (824)
+..... ....||+.|+|||++.+.. +.++|||||||++|||++|..||.+.
T Consensus 229 ~~~~~~-----~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~ 279 (681)
T 2pzi_A 229 SRINSF-----GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGR 279 (681)
T ss_dssp EETTCC-----SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTE
T ss_pred hhcccC-----CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCccc
Confidence 865432 3346999999999887654 88999999999999999999998753
No 247
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=99.96 E-value=3.2e-30 Score=276.90 Aligned_cols=175 Identities=13% Similarity=0.112 Sum_probs=151.2
Q ss_pred HHHHHHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccCCcc---cchhhhHHHHHHhhcCCCccceeeceeecCCeEE
Q 003385 598 IEDATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQ---GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSV 673 (824)
Q Consensus 598 ~~~~~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~~---~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 673 (824)
+...+|.+.+.||+|+||.||+|++. +++.||||+++..... ..+.+.+|++++++++||||+++++++.+.+..+
T Consensus 28 ~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~ 107 (286)
T 3uqc_A 28 IANGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGL 107 (286)
T ss_dssp ETTTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEE
T ss_pred EecCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEE
Confidence 44456778899999999999999986 4899999999765332 2367889999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCccc
Q 003385 674 LVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKF 753 (824)
Q Consensus 674 lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~ 753 (824)
+||||+++++|.+++... ....++..++.|++.||+|||++ ||+||||||+|||++.++.+||+++|
T Consensus 108 lv~e~~~g~~L~~~l~~~------~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~---- 174 (286)
T 3uqc_A 108 VVAEWIRGGSLQEVADTS------PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPA---- 174 (286)
T ss_dssp EEEECCCEEEHHHHHTTC------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCC----
T ss_pred EEEEecCCCCHHHHHhcC------CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEecc----
Confidence 999999999999998432 34556788999999999999998 99999999999999999999998543
Q ss_pred ccCCCCceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCCCc
Q 003385 754 AVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEK 809 (824)
Q Consensus 754 ~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~~~ 809 (824)
|++ .++.++|||||||++|||++|+.||.+..
T Consensus 175 -----------------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~ 206 (286)
T 3uqc_A 175 -----------------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAG 206 (286)
T ss_dssp -----------------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCS
T ss_pred -----------------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCC
Confidence 333 36889999999999999999999998754
No 248
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=99.96 E-value=2.9e-30 Score=304.24 Aligned_cols=202 Identities=26% Similarity=0.418 Sum_probs=171.2
Q ss_pred HHHHhhccccccCcEEEEEEEEc-CCcEEEEEEeccC-CcccchhhhHHHHHHhhcCCCccceeeceeec------CCeE
Q 003385 601 ATKMLEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSN-SYQGKREFTNEVTLLSRIHHRNLVQFLGYCQE------EGRS 672 (824)
Q Consensus 601 ~~~~i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~------~~~~ 672 (824)
..|.+.+.||+|+||.||+|.+. +|+.||||+++.. .....+.+.+|++++++++||||+++++++.. .+..
T Consensus 14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~ 93 (676)
T 3qa8_A 14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLP 93 (676)
T ss_dssp ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSC
T ss_pred CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeE
Confidence 46778899999999999999875 6889999998754 23335668899999999999999999998765 6677
Q ss_pred EEEEEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCc---EEEEecC
Q 003385 673 VLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMR---AKVSDFG 749 (824)
Q Consensus 673 ~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~---vkL~DFG 749 (824)
++||||+++|+|.+++... .....+++..+..++.|++.||+|||+. ||+||||||+||+++.++. +||+|||
T Consensus 94 ~LVmEy~~ggsL~~~L~~~-~~~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~DFG 169 (676)
T 3qa8_A 94 LLAMEYCEGGDLRKYLNQF-ENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLG 169 (676)
T ss_dssp CCEEECCSSCBHHHHHHSS-SCTTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEECSCC
T ss_pred EEEEEeCCCCCHHHHHHhc-ccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEcccc
Confidence 9999999999999998643 2233578888999999999999999998 9999999999999997664 9999999
Q ss_pred CcccccCCCCceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCCC
Q 003385 750 LSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNE 808 (824)
Q Consensus 750 la~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~~ 808 (824)
++....... ......||+.|+|||.+.+..++.++||||+||++|||++|+.||.+.
T Consensus 170 ~a~~~~~~~--~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~ 226 (676)
T 3qa8_A 170 YAKELDQGE--LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPN 226 (676)
T ss_dssp CCCBTTSCC--CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred ccccccccc--ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcc
Confidence 998654432 223456999999999999999999999999999999999999999764
No 249
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.96 E-value=1.2e-29 Score=286.61 Aligned_cols=197 Identities=15% Similarity=0.132 Sum_probs=152.2
Q ss_pred hhccccccCcEEEEEEEEc-CCcEEEEEEeccCCc---ccchhhhHHHHHHhhcCC-Cccceeec---------------
Q 003385 605 LEKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY---QGKREFTNEVTLLSRIHH-RNLVQFLG--------------- 664 (824)
Q Consensus 605 i~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~---~~~~~~~~Ei~il~~l~H-pnIv~l~~--------------- 664 (824)
+.+.||+|+||+||+|++. +|+.||||+++.... ...+.+.+|+.+++.++| +|......
T Consensus 82 ~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (413)
T 3dzo_A 82 RGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQ 161 (413)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEECCC
T ss_pred EecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcccCC
Confidence 4578999999999999965 689999999874322 235678899999999987 32211111
Q ss_pred ------eeec-----CCeEEEEEEecCCCCHHHHhhcc---cCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCC
Q 003385 665 ------YCQE-----EGRSVLVYEFMHNGTLKEHLYGT---LTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDL 730 (824)
Q Consensus 665 ------~~~~-----~~~~~lV~E~~~~gsL~~~L~~~---~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDL 730 (824)
++.. ....+++|+++ +++|.+++... ......+++..++.++.|++.||+|||++ +|+||||
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~iiHrDi 237 (413)
T 3dzo_A 162 KKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GLVHTYL 237 (413)
T ss_dssp ---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred CCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCc
Confidence 1111 12356777765 57898887321 22345577888999999999999999998 9999999
Q ss_pred CCCCEEEcCCCcEEEEecCCcccccCCCCceeccccCCCCCcchhcc----------ccCCCCchHHHHHHHHHHHHHHc
Q 003385 731 KSSNILLDKHMRAKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYY----------ISQQLTDKSDVYSFGVILLELIS 800 (824)
Q Consensus 731 kp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~l----------~~~~~~~~~DIwSlGvil~ellt 800 (824)
||+|||++.++.+||+|||+++..... ....+| +.|+|||++ ....++.++|||||||++|||++
T Consensus 238 Kp~NILl~~~~~~kL~DFG~a~~~~~~----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~ellt 312 (413)
T 3dzo_A 238 RPVDIVLDQRGGVFLTGFEHLVRDGAS----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWC 312 (413)
T ss_dssp CGGGEEECTTCCEEECCGGGCEETTEE----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHH
T ss_pred ccceEEEecCCeEEEEeccceeecCCc----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHH
Confidence 999999999999999999998764322 344567 999999999 55568889999999999999999
Q ss_pred CCCCCCCCcc
Q 003385 801 GQEAISNEKF 810 (824)
Q Consensus 801 G~~Pf~~~~~ 810 (824)
|+.||.+...
T Consensus 313 g~~Pf~~~~~ 322 (413)
T 3dzo_A 313 ADLPNTDDAA 322 (413)
T ss_dssp SSCCCCTTGG
T ss_pred CCCCCCCcch
Confidence 9999987543
No 250
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=99.95 E-value=3.5e-28 Score=262.09 Aligned_cols=170 Identities=25% Similarity=0.364 Sum_probs=146.4
Q ss_pred hccccccCcEEEEEEEEc-CCcEEEEEEeccCCcccchhhhHHHHHH-hhcCCCccceeeceeec----CCeEEEEEEec
Q 003385 606 EKKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLL-SRIHHRNLVQFLGYCQE----EGRSVLVYEFM 679 (824)
Q Consensus 606 ~~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~~~~~~~~~Ei~il-~~l~HpnIv~l~~~~~~----~~~~~lV~E~~ 679 (824)
.+.||+|+||.||+|.+. +++.||+|+++. ...+.+|++++ +..+||||+++++++.. ....++||||+
T Consensus 23 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~ 97 (299)
T 3m2w_A 23 SQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECL 97 (299)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEECCC
T ss_pred CcccccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEeec
Confidence 478999999999999875 688999999853 34677888888 55689999999999876 67789999999
Q ss_pred CCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcC---CCcEEEEecCCcccccC
Q 003385 680 HNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDK---HMRAKVSDFGLSKFAVD 756 (824)
Q Consensus 680 ~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~---~~~vkL~DFGla~~~~~ 756 (824)
++|+|.+++... ....+++..+..++.|++.||.|||++ +|+||||||+|||++. ++.+||+|||++....
T Consensus 98 ~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~- 171 (299)
T 3m2w_A 98 DGGELFSRIQDR--GDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT- 171 (299)
T ss_dssp CSCBHHHHHHHC--TTCCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCEECT-
T ss_pred CCCcHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEeccccccccc-
Confidence 999999998643 234688999999999999999999998 9999999999999998 7889999999885432
Q ss_pred CCCceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCCCC
Q 003385 757 GASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNE 808 (824)
Q Consensus 757 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~~~ 808 (824)
...++.++||||+||++|||++|+.||.+.
T Consensus 172 ----------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~ 201 (299)
T 3m2w_A 172 ----------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSN 201 (299)
T ss_dssp ----------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-
T ss_pred ----------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCC
Confidence 134678999999999999999999999653
No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.93 E-value=8.5e-28 Score=281.85 Aligned_cols=185 Identities=16% Similarity=0.119 Sum_probs=129.2
Q ss_pred cccccCcEEEEEEE-EcCCcEEEEEEeccCCc----------ccchhhhHHHHHHhhc-CCCccceeeceeecCCeEEEE
Q 003385 608 KIGSGGFGVVYYGK-LKDGKEIAVKVLTSNSY----------QGKREFTNEVTLLSRI-HHRNLVQFLGYCQEEGRSVLV 675 (824)
Q Consensus 608 ~LG~G~fg~Vy~a~-~~~g~~vAVK~l~~~~~----------~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~lV 675 (824)
..+.|+.|....++ .--|+.+|||++..... ...++|.+|+++|+++ .|+||+++++++++++..|||
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV 320 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV 320 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence 45667777666654 33589999999975421 1235689999999999 699999999999999999999
Q ss_pred EEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCccccc
Q 003385 676 YEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAV 755 (824)
Q Consensus 676 ~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~ 755 (824)
|||++|++|.+.|.. ...++.. .|+.||+.||+|+|++ |||||||||+|||+++++++||+|||+|+...
T Consensus 321 MEyv~G~~L~d~i~~----~~~l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~ 390 (569)
T 4azs_A 321 MEKLPGRLLSDMLAA----GEEIDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFGSIVTTP 390 (569)
T ss_dssp EECCCSEEHHHHHHT----TCCCCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCTTEESCC
T ss_pred EecCCCCcHHHHHHh----CCCCCHH---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeecccCeeCC
Confidence 999999999999953 3445543 5889999999999998 99999999999999999999999999998654
Q ss_pred CCCCceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCC
Q 003385 756 DGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEA 804 (824)
Q Consensus 756 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~P 804 (824)
.... .....+||+.|||||++.+ .+..++|+||+|++++++.+|..+
T Consensus 391 ~~~~-~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 391 QDCS-WPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp ---C-CSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred CCCc-cccCceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence 4322 2345679999999998865 467789999999998877665544
No 252
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.91 E-value=7.8e-25 Score=255.26 Aligned_cols=184 Identities=18% Similarity=0.215 Sum_probs=145.0
Q ss_pred hhccccccCcEEEEEEEEcCCcEEEEEEeccCCcc--------cchhhhHHHHHHhhcCCCccceeeceeecCCeEEEEE
Q 003385 605 LEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQ--------GKREFTNEVTLLSRIHHRNLVQFLGYCQEEGRSVLVY 676 (824)
Q Consensus 605 i~~~LG~G~fg~Vy~a~~~~g~~vAVK~l~~~~~~--------~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~ 676 (824)
..+.||+|+||.||+|+. .++.+++|+....... ..+.+.+|++++++++||||+++..++...+..++||
T Consensus 340 ~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVm 418 (540)
T 3en9_A 340 PEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMM 418 (540)
T ss_dssp --------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEE
T ss_pred CCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEE
Confidence 357899999999999954 4788999986543211 1245789999999999999996666666777779999
Q ss_pred EecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccccC
Q 003385 677 EFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVD 756 (824)
Q Consensus 677 E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~~ 756 (824)
||+++++|.+++.. +..++.|+++||+|||++ +|+||||||+|||++. ++||+|||+++....
T Consensus 419 E~~~ggsL~~~l~~------------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~ 481 (540)
T 3en9_A 419 SYINGKLAKDVIED------------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFGLGKISNL 481 (540)
T ss_dssp ECCCSEEHHHHSTT------------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCTTCEECCC
T ss_pred ECCCCCCHHHHHHH------------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECccCEECCC
Confidence 99999999999853 357899999999999998 9999999999999998 999999999987644
Q ss_pred CCCce------eccccCCCCCcchhcccc--CCCCchHHHHHHHHHHHHHHcCCCCCC
Q 003385 757 GASHV------SSIVRGTVGYLDPEYYIS--QQLTDKSDVYSFGVILLELISGQEAIS 806 (824)
Q Consensus 757 ~~~~~------~~~~~gt~~y~aPE~l~~--~~~~~~~DIwSlGvil~elltG~~Pf~ 806 (824)
..... ....+||+.|||||++.. ..|+..+|+|+..+-..+-+.++.+|.
T Consensus 482 ~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 482 DEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp HHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred ccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 32211 234679999999999986 678888999999999999888887764
No 253
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.84 E-value=1.3e-21 Score=209.25 Aligned_cols=141 Identities=17% Similarity=0.112 Sum_probs=113.5
Q ss_pred hhccccccCcEEEEEEEEcCCcEEEEEEeccCCcc------------------cchhhhHHHHHHhhcCCCccceeecee
Q 003385 605 LEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQ------------------GKREFTNEVTLLSRIHHRNLVQFLGYC 666 (824)
Q Consensus 605 i~~~LG~G~fg~Vy~a~~~~g~~vAVK~l~~~~~~------------------~~~~~~~Ei~il~~l~HpnIv~l~~~~ 666 (824)
+.+.||+|+||.||+|.+.+|+.||||+++..... ....+.+|++++++++ | +++.+++
T Consensus 94 ~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~~~~ 170 (282)
T 1zar_A 94 IGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVPKVY 170 (282)
T ss_dssp EEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSCCEE
T ss_pred ecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcCeEE
Confidence 45899999999999999977999999999643211 2345889999999999 4 6666655
Q ss_pred ecCCeEEEEEEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEE
Q 003385 667 QEEGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVS 746 (824)
Q Consensus 667 ~~~~~~~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~ 746 (824)
.. +..++||||+++++|.+ +.. .....++.|++.||.|||+. ||+||||||+|||++ ++.+||+
T Consensus 171 ~~-~~~~lvmE~~~g~~L~~-l~~----------~~~~~i~~qi~~~l~~lH~~---giiHrDlkp~NILl~-~~~vkl~ 234 (282)
T 1zar_A 171 AW-EGNAVLMELIDAKELYR-VRV----------ENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVLVS-EEGIWII 234 (282)
T ss_dssp EE-ETTEEEEECCCCEEGGG-CCC----------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEE-TTEEEEC
T ss_pred ec-cceEEEEEecCCCcHHH-cch----------hhHHHHHHHHHHHHHHHHHC---CCEeCCCCHHHEEEE-CCcEEEE
Confidence 44 45599999999999987 411 12346899999999999998 999999999999999 9999999
Q ss_pred ecCCcccccCCCCceeccccCCCCCcchhccc
Q 003385 747 DFGLSKFAVDGASHVSSIVRGTVGYLDPEYYI 778 (824)
Q Consensus 747 DFGla~~~~~~~~~~~~~~~gt~~y~aPE~l~ 778 (824)
|||+++. +..++|||.+.
T Consensus 235 DFG~a~~--------------~~~~~a~e~l~ 252 (282)
T 1zar_A 235 DFPQSVE--------------VGEEGWREILE 252 (282)
T ss_dssp CCTTCEE--------------TTSTTHHHHHH
T ss_pred ECCCCeE--------------CCCCCHHHHHH
Confidence 9999853 34578999874
No 254
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.74 E-value=5.4e-19 Score=215.10 Aligned_cols=113 Identities=28% Similarity=0.433 Sum_probs=104.9
Q ss_pred CCCceeEEEecCCCCCccCChhhhcccccccccccccccCCCCCC-CCCCCCcceEeecccccCCCCCccccCCCcccee
Q 003385 414 PQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLREL 492 (824)
Q Consensus 414 ~~~~L~~L~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~L~~L 492 (824)
.+++|+.|||++|+++|.+|..|++|++|+.|+|++|+|+|.+|. +++|++|+.|||++|+|+|.+|..+++|++|+.|
T Consensus 630 ~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L 709 (768)
T 3rgz_A 630 NNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEI 709 (768)
T ss_dssp SSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEE
T ss_pred ccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEE
Confidence 457899999999999999999999999999999999999998886 9999999999999999999999999999999999
Q ss_pred eeccccccccccccc-cccceeccccCCccccCCC
Q 003385 493 YVQNNMLSGTVPSSL-LSKNVVLNYAGNINLHEGG 526 (824)
Q Consensus 493 ~l~~N~l~g~ip~~l-~~~~~~l~~~~n~~lc~~~ 526 (824)
+|++|+|+|.||..- +.......+.||+.+|+.+
T Consensus 710 ~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~ 744 (768)
T 3rgz_A 710 DLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYP 744 (768)
T ss_dssp ECCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTT
T ss_pred ECcCCcccccCCCchhhccCCHHHhcCCchhcCCC
Confidence 999999999999753 5556677899999999764
No 255
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.73 E-value=4.4e-18 Score=179.50 Aligned_cols=135 Identities=24% Similarity=0.259 Sum_probs=102.7
Q ss_pred HhhccccccCcEEEEEEEE-cCCcE--EEEEEeccCCccc------------------------chhhhHHHHHHhhcCC
Q 003385 604 MLEKKIGSGGFGVVYYGKL-KDGKE--IAVKVLTSNSYQG------------------------KREFTNEVTLLSRIHH 656 (824)
Q Consensus 604 ~i~~~LG~G~fg~Vy~a~~-~~g~~--vAVK~l~~~~~~~------------------------~~~~~~Ei~il~~l~H 656 (824)
.+.+.||+|+||.||+|.+ .+|+. ||||+++...... ...+.+|++++++++|
T Consensus 50 ~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~ 129 (258)
T 1zth_A 50 AMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAKE 129 (258)
T ss_dssp EEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHHH
T ss_pred hhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHHh
Confidence 3567899999999999988 67889 9999976432110 1257889999999988
Q ss_pred Ccc--ceeeceeecCCeEEEEEEecCC-C----CHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHH-hCCCCCeEec
Q 003385 657 RNL--VQFLGYCQEEGRSVLVYEFMHN-G----TLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLH-TGCVPAIIHR 728 (824)
Q Consensus 657 pnI--v~l~~~~~~~~~~~lV~E~~~~-g----sL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH-~~~~~gIvHr 728 (824)
+++ ..+++. +..++||||+.+ | .|.+.... .++..+..++.|++.+|.||| +. ||+||
T Consensus 130 ~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~-------~~~~~~~~i~~qi~~~l~~lH~~~---givHr 195 (258)
T 1zth_A 130 AGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE-------LKELDVEGIFNDVVENVKRLYQEA---ELVHA 195 (258)
T ss_dssp TTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG-------GGGSCHHHHHHHHHHHHHHHHHTS---CEECS
T ss_pred CCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc-------cChHHHHHHHHHHHHHHHHHHHHC---CEEeC
Confidence 864 333332 245899999942 4 66665421 112345678999999999999 87 99999
Q ss_pred CCCCCCEEEcCCCcEEEEecCCcccc
Q 003385 729 DLKSSNILLDKHMRAKVSDFGLSKFA 754 (824)
Q Consensus 729 DLkp~NILl~~~~~vkL~DFGla~~~ 754 (824)
||||+|||++. .++|+|||+|...
T Consensus 196 Dlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 196 DLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp SCSTTSEEESS--SEEECCCTTCEET
T ss_pred CCCHHHEEEcC--cEEEEECcccccC
Confidence 99999999998 9999999998654
No 256
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.66 E-value=1.2e-17 Score=181.06 Aligned_cols=182 Identities=20% Similarity=0.187 Sum_probs=139.0
Q ss_pred cccceeeecccccCCC-CCCcccchhhhceeccCCCCCCcHHHHHHHHHhc-CCCCcccCCCCCCCCCCCCe-eEcCCCC
Q 003385 338 SLPFVLSFKFGKTYDS-SRGPLLNAMEINKYLERNDGSIDGVAIVSVISLY-SSADWAQEGGDPCLPVPWSW-LQCNSDP 414 (824)
Q Consensus 338 ~l~~l~~L~L~~n~~s-~LPP~i~~le~l~~L~l~~n~~~~~~l~~lk~~~-~~~~w~~~~~dpc~~~~~~~-~~c~~~~ 414 (824)
.+++|++|+|+.|.++ .+|+.+..++.|+.|+++.|.+.......+..+. .+.....+.+. ..+ +.-....
T Consensus 123 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~------l~~~~~~~~~~ 196 (313)
T 1ogq_A 123 QIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNR------LTGKIPPTFAN 196 (313)
T ss_dssp GCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSE------EEEECCGGGGG
T ss_pred CCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCe------eeccCChHHhC
Confidence 3567888888888888 6677788888888888888877632222222222 22222211100 000 0011122
Q ss_pred CCceeEEEecCCCCCccCChhhhcccccccccccccccCCCCCCCCCCCCcceEeecccccCCCCCccccCCCccceeee
Q 003385 415 QPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYV 494 (824)
Q Consensus 415 ~~~L~~L~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~L~~L~l 494 (824)
+. |+.|+|++|++++.+|..|.++++|+.|+|++|++++.+|.+..+++|+.|+|++|+|++.+|..++++++|+.|+|
T Consensus 197 l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 275 (313)
T 1ogq_A 197 LN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNV 275 (313)
T ss_dssp CC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGGCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEEC
T ss_pred Cc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCcccccCCCCEEECcCCcccCcCChHHhcCcCCCEEEC
Confidence 33 99999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccccccc-cccceeccccCCccccCCC
Q 003385 495 QNNMLSGTVPSSL-LSKNVVLNYAGNINLHEGG 526 (824)
Q Consensus 495 ~~N~l~g~ip~~l-~~~~~~l~~~~n~~lc~~~ 526 (824)
++|+++|.+|..- +..+..+.+.+|+.+|+.+
T Consensus 276 s~N~l~~~ip~~~~l~~L~~l~l~~N~~lc~~p 308 (313)
T 1ogq_A 276 SFNNLCGEIPQGGNLQRFDVSAYANNKCLCGSP 308 (313)
T ss_dssp CSSEEEEECCCSTTGGGSCGGGTCSSSEEESTT
T ss_pred cCCcccccCCCCccccccChHHhcCCCCccCCC
Confidence 9999999999862 3344677889999999865
No 257
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.64 E-value=1.3e-16 Score=174.25 Aligned_cols=183 Identities=14% Similarity=0.150 Sum_probs=136.1
Q ss_pred ccceeeecccccCCCCCCcccchhhhceeccCCCCCCcHHHHHHHHHhcCCCCcccCCCCCCCCCCCCeeE----cCCCC
Q 003385 339 LPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQ----CNSDP 414 (824)
Q Consensus 339 l~~l~~L~L~~n~~s~LPP~i~~le~l~~L~l~~n~~~~~~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~----c~~~~ 414 (824)
+++|++|+|+.|.++.+|+.+..+..|+.|+++.|.+... ...+..+..++.+..++..--...+-.... .....
T Consensus 103 l~~L~~L~L~~n~l~~lp~~~~~l~~L~~L~Ls~n~l~~l-p~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~ 181 (328)
T 4fcg_A 103 LSHLQHMTIDAAGLMELPDTMQQFAGLETLTLARNPLRAL-PASIASLNRLRELSIRACPELTELPEPLASTDASGEHQG 181 (328)
T ss_dssp GTTCSEEEEESSCCCCCCSCGGGGTTCSEEEEESCCCCCC-CGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEE
T ss_pred CCCCCEEECCCCCccchhHHHhccCCCCEEECCCCccccC-cHHHhcCcCCCEEECCCCCCccccChhHhhccchhhhcc
Confidence 6778888888888888888888888888888888876632 223334333433322111100000100000 00123
Q ss_pred CCceeEEEecCCCCCccCChhhhcccccccccccccccCCCCCCCCCCCCcceEeecccccCCCCCccccCCCccceeee
Q 003385 415 QPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYV 494 (824)
Q Consensus 415 ~~~L~~L~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~L~~L~l 494 (824)
+++|++|+|++|+|+ .+|..+++|++|+.|+|++|+++++++.+.++++|+.|+|++|++.+.+|..++++++|+.|+|
T Consensus 182 l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L 260 (328)
T 4fcg_A 182 LVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLIL 260 (328)
T ss_dssp STTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCCCCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEEC
T ss_pred CCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCcCchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEEC
Confidence 678999999999999 8999999999999999999999998888999999999999999999999999999999999999
Q ss_pred ccccccccccccccc--cceeccccCCcccc
Q 003385 495 QNNMLSGTVPSSLLS--KNVVLNYAGNINLH 523 (824)
Q Consensus 495 ~~N~l~g~ip~~l~~--~~~~l~~~~n~~lc 523 (824)
++|++.+.+|..+.. .+..+.+++|+.+-
T Consensus 261 ~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~ 291 (328)
T 4fcg_A 261 KDCSNLLTLPLDIHRLTQLEKLDLRGCVNLS 291 (328)
T ss_dssp TTCTTCCBCCTTGGGCTTCCEEECTTCTTCC
T ss_pred CCCCchhhcchhhhcCCCCCEEeCCCCCchh
Confidence 999999999987643 34677788876443
No 258
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.63 E-value=6.4e-16 Score=165.76 Aligned_cols=156 Identities=23% Similarity=0.269 Sum_probs=126.6
Q ss_pred ccceeeecccccCCCCCCcccchhhhceeccCCCCCCcHHHHHHHHHhcCCCCcccCCCCCCCCCCCCeeEcCCCCCCce
Q 003385 339 LPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 418 (824)
Q Consensus 339 l~~l~~L~L~~n~~s~LPP~i~~le~l~~L~l~~n~~~~~~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~c~~~~~~~L 418 (824)
+++|+.|+|+.|.++.+|+. ..+..|+.|+++.|.+.. . +-....+++|
T Consensus 54 l~~L~~L~L~~n~l~~~~~~-~~l~~L~~L~Ls~N~l~~-----------l-------------------~~~~~~l~~L 102 (290)
T 1p9a_G 54 YTRLTQLNLDRAELTKLQVD-GTLPVLGTLDLSHNQLQS-----------L-------------------PLLGQTLPAL 102 (290)
T ss_dssp CTTCCEEECTTSCCCEEECC-SCCTTCCEEECCSSCCSS-----------C-------------------CCCTTTCTTC
T ss_pred CCCCCEEECCCCccCcccCC-CCCCcCCEEECCCCcCCc-----------C-------------------chhhccCCCC
Confidence 45677777777777777665 667777777777776542 0 0011346799
Q ss_pred eEEEecCCCCCccCChhhhcccccccccccccccCCCCCC-CCCCCCcceEeecccccCCCCCccccCCCccceeeeccc
Q 003385 419 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNN 497 (824)
Q Consensus 419 ~~L~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~L~~L~l~~N 497 (824)
+.|+|++|+|++..|..|.+|++|+.|+|++|+|++.++. |..+++|+.|+|++|+|++..+..+.++++|+.|+|++|
T Consensus 103 ~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N 182 (290)
T 1p9a_G 103 TVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQEN 182 (290)
T ss_dssp CEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCC
Confidence 9999999999966668899999999999999999999887 789999999999999999555556789999999999999
Q ss_pred ccccccccccccc--ceeccccCCccccCCC
Q 003385 498 MLSGTVPSSLLSK--NVVLNYAGNINLHEGG 526 (824)
Q Consensus 498 ~l~g~ip~~l~~~--~~~l~~~~n~~lc~~~ 526 (824)
+|+ .+|..++.. +..+.+.+|+..|.+.
T Consensus 183 ~l~-~ip~~~~~~~~L~~l~L~~Np~~C~c~ 212 (290)
T 1p9a_G 183 SLY-TIPKGFFGSHLLPFAFLHGNPWLCNCE 212 (290)
T ss_dssp CCC-CCCTTTTTTCCCSEEECCSCCBCCSGG
T ss_pred cCC-ccChhhcccccCCeEEeCCCCccCcCc
Confidence 999 999998765 3667789999999763
No 259
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.62 E-value=6.2e-16 Score=163.81 Aligned_cols=113 Identities=24% Similarity=0.254 Sum_probs=99.8
Q ss_pred CCCCceeEEEecCCCCCccCChhhhcccccccccccccccCCCCCC-CCCCCCcceEeecccccCCCCCccccCCCccce
Q 003385 413 DPQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRE 491 (824)
Q Consensus 413 ~~~~~L~~L~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~L~~ 491 (824)
..+++|+.|+|++|++++..|..|.++++|+.|+|++|+|++.++. |.++++|+.|+|++|+|++..|..|.++++|+.
T Consensus 106 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 185 (270)
T 2o6q_A 106 DQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKT 185 (270)
T ss_dssp TTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCE
T ss_pred ccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCE
Confidence 3567999999999999977777899999999999999999998887 899999999999999999766678999999999
Q ss_pred eeeccccccccccccccc---cceeccccCCccccCCC
Q 003385 492 LYVQNNMLSGTVPSSLLS---KNVVLNYAGNINLHEGG 526 (824)
Q Consensus 492 L~l~~N~l~g~ip~~l~~---~~~~l~~~~n~~lc~~~ 526 (824)
|+|++|+++ .+|...+. .+..+.+.+|+..|.+.
T Consensus 186 L~L~~N~l~-~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 222 (270)
T 2o6q_A 186 LKLDNNQLK-RVPEGAFDSLEKLKMLQLQENPWDCTCN 222 (270)
T ss_dssp EECCSSCCS-CCCTTTTTTCTTCCEEECCSSCBCCSSS
T ss_pred EECCCCcCC-cCCHHHhccccCCCEEEecCCCeeCCCc
Confidence 999999999 77776554 44678889999988764
No 260
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.62 E-value=1.8e-15 Score=158.43 Aligned_cols=156 Identities=19% Similarity=0.203 Sum_probs=131.0
Q ss_pred cceeeecccccCCCCCCcc-cchhhhceeccCCCCCCcHHHHHHHHHhcCCCCcccCCCCCCCCCCCCeeEcCCCCCCce
Q 003385 340 PFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 418 (824)
Q Consensus 340 ~~l~~L~L~~n~~s~LPP~-i~~le~l~~L~l~~n~~~~~~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~c~~~~~~~L 418 (824)
+.++.|+|+.|.++.++|. +..++.|+.|+++.|.+.. ..+- ....+++|
T Consensus 35 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-------------------~~~~----------~~~~l~~L 85 (251)
T 3m19_A 35 ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQT-------------------LSAG----------VFDDLTEL 85 (251)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCC-------------------CCTT----------TTTTCTTC
T ss_pred CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCc-------------------cCHh----------HhccCCcC
Confidence 4678899999999999986 8999999999999997763 1110 01346799
Q ss_pred eEEEecCCCCCccCChhhhcccccccccccccccCCCCCC-CCCCCCcceEeecccccCCCCCccccCCCccceeeeccc
Q 003385 419 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNN 497 (824)
Q Consensus 419 ~~L~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~L~~L~l~~N 497 (824)
+.|+|++|+|++..+..|..+++|+.|+|++|+|++.++. |.++++|+.|+|++|+|++..|..|+.+++|+.|+|++|
T Consensus 86 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N 165 (251)
T 3m19_A 86 GTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTN 165 (251)
T ss_dssp CEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCC
Confidence 9999999999977777889999999999999999999887 789999999999999999666668999999999999999
Q ss_pred cccccccccccc---cceeccccCCccccCC
Q 003385 498 MLSGTVPSSLLS---KNVVLNYAGNINLHEG 525 (824)
Q Consensus 498 ~l~g~ip~~l~~---~~~~l~~~~n~~lc~~ 525 (824)
+++ .+|...+. .+..+.+.+|+..|..
T Consensus 166 ~l~-~~~~~~~~~l~~L~~L~l~~N~~~c~~ 195 (251)
T 3m19_A 166 QLQ-SVPHGAFDRLGKLQTITLFGNQFDCSR 195 (251)
T ss_dssp CCS-CCCTTTTTTCTTCCEEECCSCCBCTTS
T ss_pred cCC-ccCHHHHhCCCCCCEEEeeCCceeCCc
Confidence 999 66655443 4467888999988874
No 261
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.61 E-value=2.1e-15 Score=154.90 Aligned_cols=152 Identities=21% Similarity=0.212 Sum_probs=127.0
Q ss_pred eeecccccCCCCCCcccchhhhceeccCCCCCCcHHHHHHHHHhcCCCCcccCCCCCCCCCCCCeeEcCCCCCCceeEEE
Q 003385 343 LSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSITVIH 422 (824)
Q Consensus 343 ~~L~L~~n~~s~LPP~i~~le~l~~L~l~~n~~~~~~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~c~~~~~~~L~~L~ 422 (824)
+.++++.+.++.+|+.+. +.++.|+++.|.+... .+- ....+++|+.|+
T Consensus 14 ~~v~c~~~~l~~iP~~l~--~~l~~L~l~~n~i~~i-------------------~~~----------~~~~l~~L~~L~ 62 (220)
T 2v9t_B 14 NIVDCRGKGLTEIPTNLP--ETITEIRLEQNTIKVI-------------------PPG----------AFSPYKKLRRID 62 (220)
T ss_dssp TEEECTTSCCSSCCSSCC--TTCCEEECCSSCCCEE-------------------CTT----------SSTTCTTCCEEE
T ss_pred CEEEcCCCCcCcCCCccC--cCCCEEECCCCcCCCc-------------------CHh----------HhhCCCCCCEEE
Confidence 346778999999998876 6899999999877631 000 113467899999
Q ss_pred ecCCCCCccCChhhhcccccccccccccccCCCCCC-CCCCCCcceEeecccccCCCCCccccCCCccceeeeccccccc
Q 003385 423 LSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNMLSG 501 (824)
Q Consensus 423 L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~L~~L~l~~N~l~g 501 (824)
|++|+|++..|..|.+|++|+.|+|++|+|+++++. |.++++|+.|+|++|+|++..|..|..+++|+.|+|++|+|+
T Consensus 63 Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~- 141 (220)
T 2v9t_B 63 LSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQ- 141 (220)
T ss_dssp CCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCS-
T ss_pred CCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCC-
Confidence 999999988899999999999999999999998887 788999999999999999888899999999999999999999
Q ss_pred cccccccc---cceeccccCCccccCCC
Q 003385 502 TVPSSLLS---KNVVLNYAGNINLHEGG 526 (824)
Q Consensus 502 ~ip~~l~~---~~~~l~~~~n~~lc~~~ 526 (824)
.+|...+. .+..+.+.+|+..|.+.
T Consensus 142 ~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 169 (220)
T 2v9t_B 142 TIAKGTFSPLRAIQTMHLAQNPFICDCH 169 (220)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCEECSGG
T ss_pred EECHHHHhCCCCCCEEEeCCCCcCCCCc
Confidence 66665444 34677889999988663
No 262
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.60 E-value=1.2e-16 Score=184.17 Aligned_cols=171 Identities=13% Similarity=0.102 Sum_probs=94.3
Q ss_pred ccceeeecccccCCCCCCcccchhhhceeccCCCCCCcHHHHHHHHHhcCCCCcccCCCCCCCCCCCCeeEcC-------
Q 003385 339 LPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCN------- 411 (824)
Q Consensus 339 l~~l~~L~L~~n~~s~LPP~i~~le~l~~L~l~~n~~~~~~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~c~------- 411 (824)
+++|+.|+|++|.++.++| +..+..|+.|+++.|.+..... ...+..+..++ | ....+.|.
T Consensus 57 l~~L~~L~Ls~N~l~~~~~-l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L~L~~---N---~l~~~~~~~l~~L~~ 124 (487)
T 3oja_A 57 FTKLELLNLSSNVLYETLD-LESLSTLRTLDLNNNYVQELLV-----GPSIETLHAAN---N---NISRVSCSRGQGKKN 124 (487)
T ss_dssp CTTCCEEECTTSCCEEEEE-CTTCTTCCEEECCSSEEEEEEE-----CTTCCEEECCS---S---CCCCEEECCCSSCEE
T ss_pred CCCCCEEEeeCCCCCCCcc-cccCCCCCEEEecCCcCCCCCC-----CCCcCEEECcC---C---cCCCCCccccCCCCE
Confidence 4566777777777776666 6677777777777666543110 01111111100 0 11222221
Q ss_pred ---------------CCCCCceeEEEecCCCCCccCChhhh-cccccccccccccccCCCCCCCCCCCCcceEeeccccc
Q 003385 412 ---------------SDPQPSITVIHLSSKNLTGNIPSDLT-KLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQL 475 (824)
Q Consensus 412 ---------------~~~~~~L~~L~L~~n~l~g~lp~~i~-~L~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l 475 (824)
...+++|+.|+|++|+|++..|..+. .|++|+.|+|++|.|++.+ .+..+++|+.|+|++|+|
T Consensus 125 L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~~-~~~~l~~L~~L~Ls~N~l 203 (487)
T 3oja_A 125 IYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVK-GQVVFAKLKTLDLSSNKL 203 (487)
T ss_dssp EECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEE-CCCCCTTCCEEECCSSCC
T ss_pred EECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCcccccc-ccccCCCCCEEECCCCCC
Confidence 12234566666666666655555554 5666666666666666552 233466667777777777
Q ss_pred CCCCCccccCCCccceeeecccccccccccccc--ccceeccccCCccccC
Q 003385 476 TGPLPSSLMNLPNLRELYVQNNMLSGTVPSSLL--SKNVVLNYAGNINLHE 524 (824)
Q Consensus 476 ~g~lP~~l~~l~~L~~L~l~~N~l~g~ip~~l~--~~~~~l~~~~n~~lc~ 524 (824)
++ +|..++.+++|+.|+|++|+|+ .+|..+. ..+..+.+++|+..|.
T Consensus 204 ~~-~~~~~~~l~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~l~~N~l~c~ 252 (487)
T 3oja_A 204 AF-MGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCG 252 (487)
T ss_dssp CE-ECGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCBCHH
T ss_pred CC-CCHhHcCCCCccEEEecCCcCc-ccchhhccCCCCCEEEcCCCCCcCc
Confidence 63 4445677777777777777777 4666543 2345566677766653
No 263
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.59 E-value=6.4e-16 Score=175.52 Aligned_cols=180 Identities=19% Similarity=0.173 Sum_probs=143.7
Q ss_pred ccceeeecccccCCCCCCcc-cchhhhceeccCCCCCCcHHHHHHHHHhcCCCCcccCCCCCCCCCCCCeeEc-CCCCCC
Q 003385 339 LPFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQC-NSDPQP 416 (824)
Q Consensus 339 l~~l~~L~L~~n~~s~LPP~-i~~le~l~~L~l~~n~~~~~~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~c-~~~~~~ 416 (824)
+++|+.|+|+.|.++.+|+. +..+..|+.|+++.|.+.......+..+..++.+...+... ...+.- ....++
T Consensus 111 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~-----l~~i~~~~~~~l~ 185 (440)
T 3zyj_A 111 LANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKR-----LSYISEGAFEGLS 185 (440)
T ss_dssp CSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTT-----CCEECTTTTTTCS
T ss_pred CccCCEEECCCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCC-----cceeCcchhhccc
Confidence 67899999999999999985 99999999999999987753333333333333332211110 111221 234678
Q ss_pred ceeEEEecCCCCCccCChhhhcccccccccccccccCCCCCC-CCCCCCcceEeecccccCCCCCccccCCCccceeeec
Q 003385 417 SITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQ 495 (824)
Q Consensus 417 ~L~~L~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~L~~L~l~ 495 (824)
+|+.|+|++|+|+ .+|. +..+++|+.|+|++|+|++.+|. |.++++|+.|+|++|+|++..|..|.++++|+.|+|+
T Consensus 186 ~L~~L~L~~n~l~-~~~~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 263 (440)
T 3zyj_A 186 NLRYLNLAMCNLR-EIPN-LTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLA 263 (440)
T ss_dssp SCCEEECTTSCCS-SCCC-CTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECT
T ss_pred ccCeecCCCCcCc-cccc-cCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECC
Confidence 9999999999999 7774 89999999999999999999875 9999999999999999998889999999999999999
Q ss_pred cccccccccccccc---cceeccccCCccccCCC
Q 003385 496 NNMLSGTVPSSLLS---KNVVLNYAGNINLHEGG 526 (824)
Q Consensus 496 ~N~l~g~ip~~l~~---~~~~l~~~~n~~lc~~~ 526 (824)
+|+|+ .+|...+. .+..+.+.+|+..|.+.
T Consensus 264 ~N~l~-~~~~~~~~~l~~L~~L~L~~Np~~CdC~ 296 (440)
T 3zyj_A 264 HNNLT-LLPHDLFTPLHHLERIHLHHNPWNCNCD 296 (440)
T ss_dssp TSCCC-CCCTTTTSSCTTCCEEECCSSCEECSST
T ss_pred CCCCC-ccChhHhccccCCCEEEcCCCCccCCCC
Confidence 99999 78877654 34678889999999874
No 264
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.59 E-value=5e-15 Score=157.07 Aligned_cols=157 Identities=20% Similarity=0.161 Sum_probs=125.8
Q ss_pred ccceeeecccccCCCCCCcccchhhhceeccCCCCCCcHHHHHHHHHhcCCCCcccCCCCCCCCCCCCeeEcCCCCCCce
Q 003385 339 LPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 418 (824)
Q Consensus 339 l~~l~~L~L~~n~~s~LPP~i~~le~l~~L~l~~n~~~~~~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~c~~~~~~~L 418 (824)
+++|+.|+|+.|.++.+ +.+..++.|+.|+++.|.+.. ..+. ....+++|
T Consensus 62 l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~L~~n~l~~-------------------~~~~----------~~~~l~~L 111 (272)
T 3rfs_A 62 LPNVRYLALGGNKLHDI-SALKELTNLTYLILTGNQLQS-------------------LPNG----------VFDKLTNL 111 (272)
T ss_dssp CTTCCEEECTTSCCCCC-GGGTTCTTCCEEECTTSCCCC-------------------CCTT----------TTTTCTTC
T ss_pred CCCCcEEECCCCCCCCc-hhhcCCCCCCEEECCCCccCc-------------------cChh----------HhcCCcCC
Confidence 56777888888888876 467778888888888776552 0000 01346789
Q ss_pred eEEEecCCCCCccCChhhhcccccccccccccccCCCCCC-CCCCCCcceEeecccccCCCCCccccCCCccceeeeccc
Q 003385 419 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNN 497 (824)
Q Consensus 419 ~~L~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~L~~L~l~~N 497 (824)
++|+|++|++++..|..|++|++|+.|+|++|++++.++. +.++++|+.|+|++|+|++..|..++.+++|+.|+|++|
T Consensus 112 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N 191 (272)
T 3rfs_A 112 KELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQN 191 (272)
T ss_dssp CEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCC
Confidence 9999999999977777789999999999999999998887 789999999999999999777778899999999999999
Q ss_pred ccccccccccc---ccceeccccCCccccCCC
Q 003385 498 MLSGTVPSSLL---SKNVVLNYAGNINLHEGG 526 (824)
Q Consensus 498 ~l~g~ip~~l~---~~~~~l~~~~n~~lc~~~ 526 (824)
++++ +|+..+ ..+..+.+.+|+..|..+
T Consensus 192 ~l~~-~~~~~~~~l~~L~~L~l~~N~~~~~~~ 222 (272)
T 3rfs_A 192 QLKS-VPDGVFDRLTSLQYIWLHDNPWDCTCP 222 (272)
T ss_dssp CCSC-CCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred cCCc-cCHHHHhCCcCCCEEEccCCCccccCc
Confidence 9995 555443 345778889998888765
No 265
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.59 E-value=7.1e-16 Score=164.48 Aligned_cols=181 Identities=17% Similarity=0.175 Sum_probs=130.3
Q ss_pred ccceeeecccccCCCCCCc-ccchhhhceeccCCCCC-CcHHHHHHHHHhcCCCCcccCCCCCCCCCCCCee-EcCCCCC
Q 003385 339 LPFVLSFKFGKTYDSSRGP-LLNAMEINKYLERNDGS-IDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWL-QCNSDPQ 415 (824)
Q Consensus 339 l~~l~~L~L~~n~~s~LPP-~i~~le~l~~L~l~~n~-~~~~~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~-~c~~~~~ 415 (824)
+++|+.|+|+.|.++.++| .+..++.|+.|+++.|. +.......+..+..++.+..+++. ...+ ......+
T Consensus 55 ~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~------l~~~~~~~~~~l 128 (285)
T 1ozn_A 55 CRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCG------LQELGPGLFRGL 128 (285)
T ss_dssp CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSC------CCCCCTTTTTTC
T ss_pred CCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCc------CCEECHhHhhCC
Confidence 4566777777777777744 37777777777777665 443222222223233332221110 0111 0112457
Q ss_pred CceeEEEecCCCCCccCChhhhcccccccccccccccCCCCCC-CCCCCCcceEeecccccCCCCCccccCCCccceeee
Q 003385 416 PSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYV 494 (824)
Q Consensus 416 ~~L~~L~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~L~~L~l 494 (824)
++|++|+|++|++++..+..|+++++|+.|+|++|++++.++. +.++++|+.|+|++|+|++..|..++++++|+.|+|
T Consensus 129 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 208 (285)
T 1ozn_A 129 AALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYL 208 (285)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred cCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeC
Confidence 7999999999999966666799999999999999999998886 899999999999999999888999999999999999
Q ss_pred cccccccccccccc---ccceeccccCCccccCCC
Q 003385 495 QNNMLSGTVPSSLL---SKNVVLNYAGNINLHEGG 526 (824)
Q Consensus 495 ~~N~l~g~ip~~l~---~~~~~l~~~~n~~lc~~~ 526 (824)
++|+++ .+|...+ ..+..+.+++|+..|.+.
T Consensus 209 ~~n~l~-~~~~~~~~~l~~L~~L~l~~N~~~c~~~ 242 (285)
T 1ozn_A 209 FANNLS-ALPTEALAPLRALQYLRLNDNPWVCDCR 242 (285)
T ss_dssp CSSCCS-CCCHHHHTTCTTCCEEECCSSCEECSGG
T ss_pred CCCcCC-cCCHHHcccCcccCEEeccCCCccCCCC
Confidence 999999 5665433 344678889999888764
No 266
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.59 E-value=4.9e-16 Score=189.00 Aligned_cols=82 Identities=27% Similarity=0.427 Sum_probs=52.6
Q ss_pred ccccccccccccccCCCCCC-CCCCCCcceEeecccccCCCCCccccCCCccceeeeccccccccccccccc--cceecc
Q 003385 439 LSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNMLSGTVPSSLLS--KNVVLN 515 (824)
Q Consensus 439 L~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~L~~L~l~~N~l~g~ip~~l~~--~~~~l~ 515 (824)
+++|+.|||++|+++|.+|. +++|++|+.|+|++|+|+|.+|++|++|++|+.|+|++|+++|.+|..+.. .+..++
T Consensus 631 l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ 710 (768)
T 3rgz_A 631 NGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEID 710 (768)
T ss_dssp SBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEE
T ss_pred cccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEE
Confidence 34566666666666666664 666667777777777777677777777777777777777777666666533 334555
Q ss_pred ccCCc
Q 003385 516 YAGNI 520 (824)
Q Consensus 516 ~~~n~ 520 (824)
+++|.
T Consensus 711 ls~N~ 715 (768)
T 3rgz_A 711 LSNNN 715 (768)
T ss_dssp CCSSE
T ss_pred CcCCc
Confidence 56553
No 267
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.59 E-value=5.4e-16 Score=171.08 Aligned_cols=138 Identities=15% Similarity=0.158 Sum_probs=95.6
Q ss_pred HHhhccccccCcEEEEEEEEcCCcEEEEEEeccCCcc-----cchh-----------------hhHHHHHHhhcCCCccc
Q 003385 603 KMLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQ-----GKRE-----------------FTNEVTLLSRIHHRNLV 660 (824)
Q Consensus 603 ~~i~~~LG~G~fg~Vy~a~~~~g~~vAVK~l~~~~~~-----~~~~-----------------~~~Ei~il~~l~HpnIv 660 (824)
|.+.++||+|++|.||+|...+|+.||||+++..... ..++ ..+|...|.++.+.++.
T Consensus 97 Y~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~ 176 (397)
T 4gyi_A 97 YSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFP 176 (397)
T ss_dssp SEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred EEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 4567889999999999999999999999998643111 0010 12344555555433322
Q ss_pred eeeceeecCCeEEEEEEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCC
Q 003385 661 QFLGYCQEEGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKH 740 (824)
Q Consensus 661 ~l~~~~~~~~~~~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~ 740 (824)
...-+... ..+|||||+++++|..... . .....++.|++.+|.|||+. |||||||||.|||++++
T Consensus 177 vp~p~~~~--~~~LVME~i~G~~L~~l~~--------~--~~~~~l~~qll~~l~~lH~~---gIVHrDLKp~NILl~~d 241 (397)
T 4gyi_A 177 VPEPIAQS--RHTIVMSLVDALPMRQVSS--------V--PDPASLYADLIALILRLAKH---GLIHGDFNEFNILIREE 241 (397)
T ss_dssp CCCEEEEE--TTEEEEECCSCEEGGGCCC--------C--SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEEEE
T ss_pred CCeeeecc--CceEEEEecCCccHhhhcc--------c--HHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeCC
Confidence 11111111 2369999999988765431 1 12346789999999999998 99999999999999987
Q ss_pred C----------cEEEEecCCccccc
Q 003385 741 M----------RAKVSDFGLSKFAV 755 (824)
Q Consensus 741 ~----------~vkL~DFGla~~~~ 755 (824)
+ .+.|+||+.+....
T Consensus 242 gd~~d~~~~~~~~~iID~~Q~V~~~ 266 (397)
T 4gyi_A 242 KDAEDPSSITLTPIIIXFPQMVSMD 266 (397)
T ss_dssp ECSSCTTSEEEEEEECCCTTCEETT
T ss_pred CCcccccccccceEEEEeCCcccCC
Confidence 6 38999999875443
No 268
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.58 E-value=2.8e-15 Score=154.04 Aligned_cols=153 Identities=17% Similarity=0.178 Sum_probs=111.6
Q ss_pred eecccccCCCCCCcccchhhhceeccCCCCCCcHHHHHHHHHhcCCCCcccCCCCCCCCCCCCeeEcCCCCCCceeEEEe
Q 003385 344 SFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSITVIHL 423 (824)
Q Consensus 344 ~L~L~~n~~s~LPP~i~~le~l~~L~l~~n~~~~~~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~c~~~~~~~L~~L~L 423 (824)
.+++++|.++.+|+.+.. .++.|+++.|.+... .+- . ....+++|+.|+|
T Consensus 15 ~l~~s~n~l~~iP~~~~~--~~~~L~L~~N~l~~~-------------------~~~-----~----~~~~l~~L~~L~L 64 (220)
T 2v70_A 15 TVDCSNQKLNKIPEHIPQ--YTAELRLNNNEFTVL-------------------EAT-----G----IFKKLPQLRKINF 64 (220)
T ss_dssp EEECCSSCCSSCCSCCCT--TCSEEECCSSCCCEE-------------------CCC-----C----CGGGCTTCCEEEC
T ss_pred EeEeCCCCcccCccCCCC--CCCEEEcCCCcCCcc-------------------Cch-----h----hhccCCCCCEEEC
Confidence 567788888888876643 457888888876530 000 0 0123567888888
Q ss_pred cCCCCCccCChhhhcccccccccccccccCCCCCC-CCCCCCcceEeecccccCCCCCccccCCCccceeeecccccccc
Q 003385 424 SSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNMLSGT 502 (824)
Q Consensus 424 ~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~L~~L~l~~N~l~g~ 502 (824)
++|+|++..|..|.++++|+.|+|++|+|++.++. |.++++|+.|+|++|+|++..|..|..+++|+.|+|++|++++.
T Consensus 65 ~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 144 (220)
T 2v70_A 65 SNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTV 144 (220)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCB
T ss_pred CCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEE
Confidence 88888866666888888888888888888888876 78888888888888888877788888888888888888888844
Q ss_pred cccccc--ccceeccccCCccccCCC
Q 003385 503 VPSSLL--SKNVVLNYAGNINLHEGG 526 (824)
Q Consensus 503 ip~~l~--~~~~~l~~~~n~~lc~~~ 526 (824)
.|..+. ..+..+.+.+|+..|.+.
T Consensus 145 ~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 145 APGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp CTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred CHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 454442 234667778888777653
No 269
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.58 E-value=2.7e-15 Score=160.86 Aligned_cols=170 Identities=21% Similarity=0.230 Sum_probs=119.1
Q ss_pred cceeeecccccCCCCCCcccchhhhceeccCCCCCCcHHHHHHHHHhcCCCCcccCCCCCCCCCCCCeeEcCCCCCCcee
Q 003385 340 PFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSIT 419 (824)
Q Consensus 340 ~~l~~L~L~~n~~s~LPP~i~~le~l~~L~l~~n~~~~~~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~c~~~~~~~L~ 419 (824)
++++.+++..+.++.+|+.+. +.++.|+++.|.+.......+..+..+.....+++ ....+... ..+++|+
T Consensus 10 ~~l~~l~~~~~~l~~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n------~l~~~~~~-~~l~~L~ 80 (290)
T 1p9a_G 10 ASHLEVNCDKRNLTALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRA------ELTKLQVD-GTLPVLG 80 (290)
T ss_dssp TTCCEEECTTSCCSSCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTS------CCCEEECC-SCCTTCC
T ss_pred CCccEEECCCCCCCcCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCC------ccCcccCC-CCCCcCC
Confidence 344455555555555555443 34555555555443322222222222222221111 01122221 4578999
Q ss_pred EEEecCCCCCccCChhhhcccccccccccccccCCCCCC-CCCCCCcceEeecccccCCCCCccccCCCccceeeecccc
Q 003385 420 VIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNM 498 (824)
Q Consensus 420 ~L~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~L~~L~l~~N~ 498 (824)
.|+|++|+|+ .+|..+..+++|+.|+|++|+|++.++. |.++++|+.|+|++|+|++..|..|..+++|+.|+|++|+
T Consensus 81 ~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 159 (290)
T 1p9a_G 81 TLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNN 159 (290)
T ss_dssp EEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSC
T ss_pred EEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCc
Confidence 9999999999 8999999999999999999999999986 8999999999999999997777788999999999999999
Q ss_pred cccccccccccc---ceeccccCCc
Q 003385 499 LSGTVPSSLLSK---NVVLNYAGNI 520 (824)
Q Consensus 499 l~g~ip~~l~~~---~~~l~~~~n~ 520 (824)
|+ .+|...+.. +..+.+++|.
T Consensus 160 l~-~l~~~~~~~l~~L~~L~L~~N~ 183 (290)
T 1p9a_G 160 LT-ELPAGLLNGLENLDTLLLQENS 183 (290)
T ss_dssp CS-CCCTTTTTTCTTCCEEECCSSC
T ss_pred CC-ccCHHHhcCcCCCCEEECCCCc
Confidence 99 888877653 4566777775
No 270
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.58 E-value=1.6e-15 Score=152.33 Aligned_cols=154 Identities=18% Similarity=0.162 Sum_probs=125.2
Q ss_pred eeecccccCCCCCCcccchhhhceeccCCCCCCcHHHHHHHHHhcCCCCcccCCCCCCCCCCCCeeEcCCCCCCceeEEE
Q 003385 343 LSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSITVIH 422 (824)
Q Consensus 343 ~~L~L~~n~~s~LPP~i~~le~l~~L~l~~n~~~~~~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~c~~~~~~~L~~L~ 422 (824)
+.++++.|.++.+|+.+.. .++.|+++.|.+.. ..+ .. ....+++|+.|+
T Consensus 11 ~~l~~s~~~l~~ip~~~~~--~l~~L~l~~n~i~~-------------------~~~------~~---~~~~l~~L~~L~ 60 (192)
T 1w8a_A 11 TTVDCTGRGLKEIPRDIPL--HTTELLLNDNELGR-------------------ISS------DG---LFGRLPHLVKLE 60 (192)
T ss_dssp TEEECTTSCCSSCCSCCCT--TCSEEECCSCCCCS-------------------BCC------SC---SGGGCTTCCEEE
T ss_pred CEEEcCCCCcCcCccCCCC--CCCEEECCCCcCCc-------------------cCC------cc---ccccCCCCCEEE
Confidence 5678899999999998765 89999999997763 000 00 012467999999
Q ss_pred ecCCCCCccCChhhhcccccccccccccccCCCCCC-CCCCCCcceEeecccccCCCCCccccCCCccceeeeccccccc
Q 003385 423 LSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNMLSG 501 (824)
Q Consensus 423 L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~L~~L~l~~N~l~g 501 (824)
|++|+|++..|..|.+|++|+.|+|++|+|++.++. |.++++|+.|+|++|+|++.+|..++.+++|+.|+|++|++++
T Consensus 61 Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c 140 (192)
T 1w8a_A 61 LKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNC 140 (192)
T ss_dssp CCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCC
T ss_pred CCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccC
Confidence 999999988899999999999999999999999987 8999999999999999999999999999999999999999998
Q ss_pred ccccccccc-ceeccccCCccccCCC
Q 003385 502 TVPSSLLSK-NVVLNYAGNINLHEGG 526 (824)
Q Consensus 502 ~ip~~l~~~-~~~l~~~~n~~lc~~~ 526 (824)
..+...+.. +....+.++...|..+
T Consensus 141 ~c~l~~~~~~l~~~~~~~~~~~C~~P 166 (192)
T 1w8a_A 141 NCHLAWFAEWLRKKSLNGGAARCGAP 166 (192)
T ss_dssp SGGGHHHHHHHHHHCCSGGGCBBCSS
T ss_pred cCcchHHHHHHHHcCCCCCCCCCCCC
Confidence 776443322 2223445666667655
No 271
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.58 E-value=5.8e-16 Score=166.83 Aligned_cols=183 Identities=14% Similarity=0.064 Sum_probs=137.1
Q ss_pred cccceeeecccccCCCCCCcccchhhhceeccCCCCCCcHHHH-HHHHHhcCCCCcccCCCCCCCCCCCCeeE-cCCCCC
Q 003385 338 SLPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAI-VSVISLYSSADWAQEGGDPCLPVPWSWLQ-CNSDPQ 415 (824)
Q Consensus 338 ~l~~l~~L~L~~n~~s~LPP~i~~le~l~~L~l~~n~~~~~~l-~~lk~~~~~~~w~~~~~dpc~~~~~~~~~-c~~~~~ 415 (824)
.+++|+.|+|+.|.++.+|+.+..++.|+.|+++.|.+..... ..+..+..++.+..+++. ..... .....+
T Consensus 76 ~~~~L~~L~Ls~n~i~~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~------l~~~~~~~~~~l 149 (306)
T 2z66_A 76 GTTSLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTH------TRVAFNGIFNGL 149 (306)
T ss_dssp SCSCCCEEECCSCSEEEEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSC------CEECSTTTTTTC
T ss_pred cccccCEEECCCCccccChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCc------CCccchhhcccC
Confidence 3567888888888888888888888888888888877654221 222222233333221110 00000 112456
Q ss_pred CceeEEEecCCCCCc-cCChhhhcccccccccccccccCCCCCC-CCCCCCcceEeecccccCCCCCccccCCCccceee
Q 003385 416 PSITVIHLSSKNLTG-NIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELY 493 (824)
Q Consensus 416 ~~L~~L~L~~n~l~g-~lp~~i~~L~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~L~~L~ 493 (824)
++|++|+|++|++++ .+|..+..+++|+.|+|++|++++.+|. +.++++|+.|+|++|+|++..+..+..+++|+.|+
T Consensus 150 ~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 229 (306)
T 2z66_A 150 SSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLD 229 (306)
T ss_dssp TTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEE
T ss_pred cCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeE
Confidence 799999999999986 5899999999999999999999998775 88999999999999999977777899999999999
Q ss_pred eccccccccccccccc---cceeccccCCccccCCC
Q 003385 494 VQNNMLSGTVPSSLLS---KNVVLNYAGNINLHEGG 526 (824)
Q Consensus 494 l~~N~l~g~ip~~l~~---~~~~l~~~~n~~lc~~~ 526 (824)
|++|++++..|..+.. .+..+.+++|+..|.+.
T Consensus 230 L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~ 265 (306)
T 2z66_A 230 YSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCE 265 (306)
T ss_dssp CTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGG
T ss_pred CCCCCCcccCHHHHHhhhccCCEEEccCCCeecccC
Confidence 9999999877776654 44678889999888663
No 272
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.57 E-value=8.4e-15 Score=151.34 Aligned_cols=150 Identities=21% Similarity=0.172 Sum_probs=123.9
Q ss_pred eeecccccCCCCCCcccchhhhceeccCCCCCCcHHHHHHHHHhcCCCCcccCCCCCCCCCCCCeeEcCCCCCCceeEEE
Q 003385 343 LSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSITVIH 422 (824)
Q Consensus 343 ~~L~L~~n~~s~LPP~i~~le~l~~L~l~~n~~~~~~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~c~~~~~~~L~~L~ 422 (824)
+.++++.+.++.+|+.+. +.|+.|+++.|.+.. ..|- ....+++|+.|+
T Consensus 22 ~~v~c~~~~l~~ip~~~~--~~L~~L~Ls~n~i~~-------------------~~~~----------~~~~l~~L~~L~ 70 (229)
T 3e6j_A 22 TTVDCRSKRHASVPAGIP--TNAQILYLHDNQITK-------------------LEPG----------VFDSLINLKELY 70 (229)
T ss_dssp TEEECTTSCCSSCCSCCC--TTCSEEECCSSCCCC-------------------CCTT----------TTTTCTTCCEEE
T ss_pred CEeEccCCCcCccCCCCC--CCCCEEEcCCCccCc-------------------cCHH----------HhhCccCCcEEE
Confidence 457778999999998776 889999999998763 1110 113467899999
Q ss_pred ecCCCCCccCChhhhcccccccccccccccCCCCCC-CCCCCCcceEeecccccCCCCCccccCCCccceeeeccccccc
Q 003385 423 LSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNMLSG 501 (824)
Q Consensus 423 L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~L~~L~l~~N~l~g 501 (824)
|++|+|++..+..|.+|++|+.|+|++|+|+++++. |..+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|+|+
T Consensus 71 L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~- 148 (229)
T 3e6j_A 71 LGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLK- 148 (229)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCC-
T ss_pred CCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCC-
Confidence 999999854456679999999999999999998887 788999999999999999 89999999999999999999999
Q ss_pred cccccccc---cceeccccCCccccCC
Q 003385 502 TVPSSLLS---KNVVLNYAGNINLHEG 525 (824)
Q Consensus 502 ~ip~~l~~---~~~~l~~~~n~~lc~~ 525 (824)
.+|...+. .+..+.+.+|+..|.+
T Consensus 149 ~~~~~~~~~l~~L~~L~l~~N~~~c~c 175 (229)
T 3e6j_A 149 SIPHGAFDRLSSLTHAYLFGNPWDCEC 175 (229)
T ss_dssp CCCTTTTTTCTTCCEEECTTSCBCTTB
T ss_pred ccCHHHHhCCCCCCEEEeeCCCccCCc
Confidence 77766544 4467788999988866
No 273
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.57 E-value=7.9e-16 Score=168.02 Aligned_cols=174 Identities=10% Similarity=0.086 Sum_probs=97.7
Q ss_pred cccceeeecccccCCCCCCcccchhhhceeccCCCCCCcHHHHHHHHHhcCCCCcccCCCCCCCCCCCCeeEcCCCCCCc
Q 003385 338 SLPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPS 417 (824)
Q Consensus 338 ~l~~l~~L~L~~n~~s~LPP~i~~le~l~~L~l~~n~~~~~~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~c~~~~~~~ 417 (824)
..+.++.|+|+.|.++.+|+.+..++.|+.|+++.|.+.. ....+..+..+..+..+++. ...++.....+++
T Consensus 79 ~~~~l~~L~L~~n~l~~lp~~l~~l~~L~~L~L~~n~l~~-lp~~~~~l~~L~~L~Ls~n~------l~~lp~~l~~l~~ 151 (328)
T 4fcg_A 79 TQPGRVALELRSVPLPQFPDQAFRLSHLQHMTIDAAGLME-LPDTMQQFAGLETLTLARNP------LRALPASIASLNR 151 (328)
T ss_dssp TSTTCCEEEEESSCCSSCCSCGGGGTTCSEEEEESSCCCC-CCSCGGGGTTCSEEEEESCC------CCCCCGGGGGCTT
T ss_pred cccceeEEEccCCCchhcChhhhhCCCCCEEECCCCCccc-hhHHHhccCCCCEEECCCCc------cccCcHHHhcCcC
Confidence 4567899999999999999999999999999999998763 11122222222222221110 0011111223445
Q ss_pred eeEEEecCCCCCccCChhhhc---------ccccccccccccccCCCCCCCCCCCCcceEeecccccCCCCCccccCCCc
Q 003385 418 ITVIHLSSKNLTGNIPSDLTK---------LSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPN 488 (824)
Q Consensus 418 L~~L~L~~n~l~g~lp~~i~~---------L~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~ 488 (824)
|+.|+|++|++.+.+|..++. +++|+.|+|++|+|+.+++.+.++++|+.|+|++|+|+ .+|..++.+++
T Consensus 152 L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~lp~~l~~l~~L~~L~L~~N~l~-~l~~~l~~l~~ 230 (328)
T 4fcg_A 152 LRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIRSLPASIANLQNLKSLKIRNSPLS-ALGPAIHHLPK 230 (328)
T ss_dssp CCEEEEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCCCCCGGGGGCTTCCEEEEESSCCC-CCCGGGGGCTT
T ss_pred CCEEECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcCcchHhhcCCCCCCEEEccCCCCC-cCchhhccCCC
Confidence 555555555555555555443 55555555555555544434555555555555555555 34555555555
Q ss_pred cceeeecccccccccccccc--ccceeccccCC
Q 003385 489 LRELYVQNNMLSGTVPSSLL--SKNVVLNYAGN 519 (824)
Q Consensus 489 L~~L~l~~N~l~g~ip~~l~--~~~~~l~~~~n 519 (824)
|+.|+|++|++.+.+|..+. ..+..+.+++|
T Consensus 231 L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n 263 (328)
T 4fcg_A 231 LEELDLRGCTALRNYPPIFGGRAPLKRLILKDC 263 (328)
T ss_dssp CCEEECTTCTTCCBCCCCTTCCCCCCEEECTTC
T ss_pred CCEEECcCCcchhhhHHHhcCCCCCCEEECCCC
Confidence 55555555555555555442 22334444444
No 274
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.57 E-value=1.1e-15 Score=174.10 Aligned_cols=181 Identities=18% Similarity=0.190 Sum_probs=142.8
Q ss_pred cccceeeecccccCCCCCCcc-cchhhhceeccCCCCCCcHHHHHHHHHhcCCCCcccCCCCCCCCCCCCeeEc-CCCCC
Q 003385 338 SLPFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQC-NSDPQ 415 (824)
Q Consensus 338 ~l~~l~~L~L~~n~~s~LPP~-i~~le~l~~L~l~~n~~~~~~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~c-~~~~~ 415 (824)
.+++|++|+|++|.++.+|+. +..+..|+.|+++.|.+.......+..+..+..+...+ |. ....+.- ....+
T Consensus 121 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~---~~--~l~~i~~~~~~~l 195 (452)
T 3zyi_A 121 GLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGE---LK--KLEYISEGAFEGL 195 (452)
T ss_dssp TCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCC---CT--TCCEECTTTTTTC
T ss_pred CcccCCEEECCCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCC---CC--CccccChhhccCC
Confidence 367889999999999999987 88899999999999987753333333333333332211 10 0112221 23467
Q ss_pred CceeEEEecCCCCCccCChhhhcccccccccccccccCCCCCC-CCCCCCcceEeecccccCCCCCccccCCCccceeee
Q 003385 416 PSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYV 494 (824)
Q Consensus 416 ~~L~~L~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~L~~L~l 494 (824)
++|+.|+|++|+|+ .+| .+..+++|+.|+|++|+|++.+|. |.++++|+.|+|++|+|++..|..|.++++|+.|+|
T Consensus 196 ~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 273 (452)
T 3zyi_A 196 FNLKYLNLGMCNIK-DMP-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNL 273 (452)
T ss_dssp TTCCEEECTTSCCS-SCC-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCccc-ccc-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEEC
Confidence 89999999999999 566 489999999999999999999886 999999999999999999888999999999999999
Q ss_pred ccccccccccccccc---cceeccccCCccccCCC
Q 003385 495 QNNMLSGTVPSSLLS---KNVVLNYAGNINLHEGG 526 (824)
Q Consensus 495 ~~N~l~g~ip~~l~~---~~~~l~~~~n~~lc~~~ 526 (824)
++|+|+ .+|...+. .+..+.+.+|+..|.+.
T Consensus 274 ~~N~l~-~~~~~~~~~l~~L~~L~L~~Np~~CdC~ 307 (452)
T 3zyi_A 274 AHNNLS-SLPHDLFTPLRYLVELHLHHNPWNCDCD 307 (452)
T ss_dssp CSSCCS-CCCTTSSTTCTTCCEEECCSSCEECSTT
T ss_pred CCCcCC-ccChHHhccccCCCEEEccCCCcCCCCC
Confidence 999999 77776654 44678889999999874
No 275
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.55 E-value=7.6e-15 Score=150.76 Aligned_cols=137 Identities=19% Similarity=0.236 Sum_probs=118.8
Q ss_pred ceeeecccccCCCCCCcc--cchhhhceeccCCCCCCcHHHHHHHHHhcCCCCcccCCCCCCCCCCCCeeEcCCCCCCce
Q 003385 341 FVLSFKFGKTYDSSRGPL--LNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 418 (824)
Q Consensus 341 ~l~~L~L~~n~~s~LPP~--i~~le~l~~L~l~~n~~~~~~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~c~~~~~~~L 418 (824)
.++.|+|+.|.++.++|. +..++.|+.|+++.|.+... .+- ....+++|
T Consensus 33 ~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i-------------------~~~----------~~~~l~~L 83 (220)
T 2v70_A 33 YTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDI-------------------EEG----------AFEGASGV 83 (220)
T ss_dssp TCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEE-------------------CTT----------TTTTCTTC
T ss_pred CCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEE-------------------CHH----------HhCCCCCC
Confidence 457899999999999764 89999999999999987641 000 12346799
Q ss_pred eEEEecCCCCCccCChhhhcccccccccccccccCCCCCC-CCCCCCcceEeecccccCCCCCccccCCCccceeeeccc
Q 003385 419 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNN 497 (824)
Q Consensus 419 ~~L~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~L~~L~l~~N 497 (824)
++|+|++|+|++..|..|.+|++|+.|+|++|+|++.+|. |.++++|+.|+|++|+|++..|..|..+++|+.|+|++|
T Consensus 84 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 163 (220)
T 2v70_A 84 NEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLAN 163 (220)
T ss_dssp CEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSC
T ss_pred CEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCc
Confidence 9999999999977777899999999999999999999876 899999999999999999888999999999999999999
Q ss_pred ccccccccc
Q 003385 498 MLSGTVPSS 506 (824)
Q Consensus 498 ~l~g~ip~~ 506 (824)
++++..+..
T Consensus 164 ~l~c~c~l~ 172 (220)
T 2v70_A 164 PFNCNCYLA 172 (220)
T ss_dssp CEECSGGGH
T ss_pred CCcCCCchH
Confidence 999766543
No 276
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.55 E-value=7.7e-16 Score=166.90 Aligned_cols=175 Identities=25% Similarity=0.222 Sum_probs=125.1
Q ss_pred cccceeeecccccCCC-CCCcccchhhhceeccCCCCCCcHHHHHHHHHhcCCCCcccCCCCCCCCCCCC-eeEcCCCCC
Q 003385 338 SLPFVLSFKFGKTYDS-SRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWS-WLQCNSDPQ 415 (824)
Q Consensus 338 ~l~~l~~L~L~~n~~s-~LPP~i~~le~l~~L~l~~n~~~~~~l~~lk~~~~~~~w~~~~~dpc~~~~~~-~~~c~~~~~ 415 (824)
.+++|++|+|+.|.++ .+|+.+..++.|+.|+++.|.+.......+..+..++.+..+.+. .. .+......+
T Consensus 99 ~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~------l~~~~p~~l~~l 172 (313)
T 1ogq_A 99 KLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNR------ISGAIPDSYGSF 172 (313)
T ss_dssp GCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSC------CEEECCGGGGCC
T ss_pred cCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCc------ccCcCCHHHhhh
Confidence 4678999999999998 777789999999999999998774333334444344443222111 11 111112234
Q ss_pred C-ceeEEEecCCCCCccCChhhhcccccccccccccccCCCCCC-CCCCCCcceEeecccccCCCCCccccCCCccceee
Q 003385 416 P-SITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELY 493 (824)
Q Consensus 416 ~-~L~~L~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~L~~L~ 493 (824)
+ +|+.|+|++|++++.+|..+..++ |+.|+|++|++++.+|. +.++++|+.|+|++|++++.+|. ++.+++|++|+
T Consensus 173 ~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~ 250 (313)
T 1ogq_A 173 SKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLD 250 (313)
T ss_dssp CTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEE
T ss_pred hhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEE
Confidence 4 788888888888888888888887 88888888888877775 77888888888888888865555 77888888888
Q ss_pred eccccccccccccccc--cceeccccCCc
Q 003385 494 VQNNMLSGTVPSSLLS--KNVVLNYAGNI 520 (824)
Q Consensus 494 l~~N~l~g~ip~~l~~--~~~~l~~~~n~ 520 (824)
|++|+++|.+|..+.. .+..+.+++|.
T Consensus 251 Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~ 279 (313)
T 1ogq_A 251 LRNNRIYGTLPQGLTQLKFLHSLNVSFNN 279 (313)
T ss_dssp CCSSCCEECCCGGGGGCTTCCEEECCSSE
T ss_pred CcCCcccCcCChHHhcCcCCCEEECcCCc
Confidence 8888888888877643 34566667774
No 277
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.54 E-value=1.6e-14 Score=151.20 Aligned_cols=136 Identities=15% Similarity=0.138 Sum_probs=118.4
Q ss_pred cccceeeecccccCCCCCCcc-cchhhhceeccCCCCCCcHHHHHHHHHhcCCCCcccCCCCCCCCCCCCeeEcCCCCCC
Q 003385 338 SLPFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQP 416 (824)
Q Consensus 338 ~l~~l~~L~L~~n~~s~LPP~-i~~le~l~~L~l~~n~~~~~~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~c~~~~~~ 416 (824)
.+++|+.|+|+.|.++.++|. +..+..|+.|+++.|.+.. ..+. ....++
T Consensus 57 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-------------------~~~~----------~~~~l~ 107 (251)
T 3m19_A 57 GLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLAS-------------------LPLG----------VFDHLT 107 (251)
T ss_dssp TCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCC-------------------CCTT----------TTTTCT
T ss_pred CcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccc-------------------cChh----------HhcccC
Confidence 367899999999999999997 8999999999999997763 0100 013467
Q ss_pred ceeEEEecCCCCCccCChhhhcccccccccccccccCCCCCC-CCCCCCcceEeecccccCCCCCccccCCCccceeeec
Q 003385 417 SITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQ 495 (824)
Q Consensus 417 ~L~~L~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~L~~L~l~ 495 (824)
+|++|+|++|+|++..+..|.++++|+.|+|++|+|++.++. |.++++|+.|+|++|+|++..|..+.++++|+.|+|+
T Consensus 108 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~ 187 (251)
T 3m19_A 108 QLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLF 187 (251)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEee
Confidence 999999999999966666789999999999999999999985 8999999999999999997777799999999999999
Q ss_pred ccccccc
Q 003385 496 NNMLSGT 502 (824)
Q Consensus 496 ~N~l~g~ 502 (824)
+|++++.
T Consensus 188 ~N~~~c~ 194 (251)
T 3m19_A 188 GNQFDCS 194 (251)
T ss_dssp SCCBCTT
T ss_pred CCceeCC
Confidence 9999965
No 278
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.54 E-value=1.8e-14 Score=163.83 Aligned_cols=186 Identities=13% Similarity=0.081 Sum_probs=132.4
Q ss_pred cceeeecccccCCCCCCcc---------cchhhhceeccCCCCCCcHHHHHHHHHhcCC---CCcccCCC----------
Q 003385 340 PFVLSFKFGKTYDSSRGPL---------LNAMEINKYLERNDGSIDGVAIVSVISLYSS---ADWAQEGG---------- 397 (824)
Q Consensus 340 ~~l~~L~L~~n~~s~LPP~---------i~~le~l~~L~l~~n~~~~~~l~~lk~~~~~---~~w~~~~~---------- 397 (824)
..|+.|+++.|.++.+++. +..++.|+.|+++.|.+.......+...... ......+.
T Consensus 180 ~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~ 259 (455)
T 3v47_A 180 KHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHT 259 (455)
T ss_dssp CEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCC
T ss_pred ccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchh
Confidence 4556666666666666554 2244789999999999888777666655211 11100000
Q ss_pred -----CC-----CCCCCCCeeE----------c-CCCCCCceeEEEecCCCCCccCChhhhcccccccccccccccCCCC
Q 003385 398 -----DP-----CLPVPWSWLQ----------C-NSDPQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPI 456 (824)
Q Consensus 398 -----dp-----c~~~~~~~~~----------c-~~~~~~~L~~L~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~ 456 (824)
.+ +.......+. . ....+++|+.|+|++|++++..|..|.++++|+.|+|++|++++.+
T Consensus 260 ~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 339 (455)
T 3v47_A 260 NFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSID 339 (455)
T ss_dssp SSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEEC
T ss_pred hhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcC
Confidence 00 0000011111 1 1245678999999999999888889999999999999999998887
Q ss_pred CC-CCCCCCcceEeecccccCCCCCccccCCCccceeeeccccccccccccccc---cceeccccCCccccCCC
Q 003385 457 PD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNMLSGTVPSSLLS---KNVVLNYAGNINLHEGG 526 (824)
Q Consensus 457 p~-~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~L~~L~l~~N~l~g~ip~~l~~---~~~~l~~~~n~~lc~~~ 526 (824)
|. +.++++|+.|+|++|+|++..|..|+++++|+.|+|++|+++ .+|...+. .+..+.+++|+..|.++
T Consensus 340 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 340 SRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp GGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCS-CCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred hhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccc-cCCHhHhccCCcccEEEccCCCcccCCC
Confidence 75 788999999999999999888889999999999999999999 67776544 44677889999888775
No 279
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.52 E-value=2.9e-15 Score=176.85 Aligned_cols=182 Identities=13% Similarity=0.027 Sum_probs=141.8
Q ss_pred cccceeeecccccCCCCCCcccchhhhceeccCCCCCCcHHHH-HHHHHhcCCCCcccCCCCCCCCCCCCe-eEcCCCCC
Q 003385 338 SLPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAI-VSVISLYSSADWAQEGGDPCLPVPWSW-LQCNSDPQ 415 (824)
Q Consensus 338 ~l~~l~~L~L~~n~~s~LPP~i~~le~l~~L~l~~n~~~~~~l-~~lk~~~~~~~w~~~~~dpc~~~~~~~-~~c~~~~~ 415 (824)
.++.|+.|+|+.|.++.+|+.+..++.|+.|+++.|.+..... ..+..+..+.....+.+. ... .......+
T Consensus 374 ~~~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~------l~~~~~~~~~~l 447 (606)
T 3vq2_A 374 GTNSLRHLDLSFNGAIIMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTN------TKIDFDGIFLGL 447 (606)
T ss_dssp CCSCCCEEECCSCSEEEECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSC------CEECCTTTTTTC
T ss_pred cCCcccEeECCCCccccchhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCC------CCccchhhhcCC
Confidence 4567888888888888888888888899999998887664321 223333333333221111 001 01123457
Q ss_pred CceeEEEecCCCCCc-cCChhhhcccccccccccccccCCCCCC-CCCCCCcceEeecccccCCCCCccccCCCccceee
Q 003385 416 PSITVIHLSSKNLTG-NIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELY 493 (824)
Q Consensus 416 ~~L~~L~L~~n~l~g-~lp~~i~~L~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~L~~L~ 493 (824)
++|+.|+|++|++++ .+|..++.+++|+.|+|++|++++.+|. +.++++|+.|+|++|++++.+|..++++++|+.|+
T Consensus 448 ~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 527 (606)
T 3vq2_A 448 TSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLD 527 (606)
T ss_dssp TTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEE
T ss_pred CCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEE
Confidence 899999999999997 4799999999999999999999999886 89999999999999999988899999999999999
Q ss_pred eccccccccccccccc---cceeccccCCccccCCC
Q 003385 494 VQNNMLSGTVPSSLLS---KNVVLNYAGNINLHEGG 526 (824)
Q Consensus 494 l~~N~l~g~ip~~l~~---~~~~l~~~~n~~lc~~~ 526 (824)
|++|+++ .+|..+.. .+..+.+.+|+..|.++
T Consensus 528 l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~c~ 562 (606)
T 3vq2_A 528 CSFNRIE-TSKGILQHFPKSLAFFNLTNNSVACICE 562 (606)
T ss_dssp CTTSCCC-CEESCGGGSCTTCCEEECCSCCCCCSST
T ss_pred CCCCcCc-ccCHhHhhhcccCcEEEccCCCcccCCc
Confidence 9999999 89988544 25678889999999775
No 280
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.52 E-value=9.3e-15 Score=155.77 Aligned_cols=176 Identities=15% Similarity=0.124 Sum_probs=127.7
Q ss_pred cceeeecccccCCCCCCcc-cchhhhceeccCCCCCCcHHHHHHHHHhcCCCCcccCCCCCCCCCCCCee-EcCCCCCCc
Q 003385 340 PFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWL-QCNSDPQPS 417 (824)
Q Consensus 340 ~~l~~L~L~~n~~s~LPP~-i~~le~l~~L~l~~n~~~~~~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~-~c~~~~~~~ 417 (824)
+.|+.|+|++|.++.+|+. +..+..|+.|+++.|.+.......+..+..+..+..+.+.-- ..+ .-....+++
T Consensus 32 ~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l-----~~~~~~~~~~l~~ 106 (285)
T 1ozn_A 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQL-----RSVDPATFHGLGR 106 (285)
T ss_dssp TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTC-----CCCCTTTTTTCTT
T ss_pred CCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCc-----cccCHHHhcCCcC
Confidence 4788999999999999986 999999999999999877543333444434444332211101 111 011234678
Q ss_pred eeEEEecCCCCCccCChhhhcccccccccccccccCCCCCC-CCCCCCcceEeecccccCCCCCccccCCCccceeeecc
Q 003385 418 ITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQN 496 (824)
Q Consensus 418 L~~L~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~L~~L~l~~ 496 (824)
|++|+|++|++++..|..+.++++|+.|+|++|++++.++. +.++++|+.|+|++|+|++..+..+..+++|+.|+|++
T Consensus 107 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 186 (285)
T 1ozn_A 107 LHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQ 186 (285)
T ss_dssp CCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCC
Confidence 88888888888877778888888888888888888888776 78888888888888888855555788888888888888
Q ss_pred cccccccccccc--ccceeccccCCc
Q 003385 497 NMLSGTVPSSLL--SKNVVLNYAGNI 520 (824)
Q Consensus 497 N~l~g~ip~~l~--~~~~~l~~~~n~ 520 (824)
|++++..|..+. ..+..+.+++|.
T Consensus 187 n~l~~~~~~~~~~l~~L~~L~l~~n~ 212 (285)
T 1ozn_A 187 NRVAHVHPHAFRDLGRLMTLYLFANN 212 (285)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred CcccccCHhHccCcccccEeeCCCCc
Confidence 888855565553 234566666663
No 281
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.52 E-value=1.3e-14 Score=141.95 Aligned_cols=136 Identities=19% Similarity=0.150 Sum_probs=118.8
Q ss_pred ccceeeecccccCCC--CCCcccchhhhceeccCCCCCCcHHHHHHHHHhcCCCCcccCCCCCCCCCCCCeeEcCCCCCC
Q 003385 339 LPFVLSFKFGKTYDS--SRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQP 416 (824)
Q Consensus 339 l~~l~~L~L~~n~~s--~LPP~i~~le~l~~L~l~~n~~~~~~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~c~~~~~~ 416 (824)
.+.|+.|+|++|.++ .+|+.+..+..|+.|+++.|.+.. . .....++
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~-------------------~------------~~~~~l~ 71 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLIS-------------------V------------SNLPKLP 71 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCC-------------------C------------SSCCCCS
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCC-------------------h------------hhhccCC
Confidence 467899999999999 999999999999999999997763 0 0113467
Q ss_pred ceeEEEecCCCCCccCChhhhcccccccccccccccCCCC--CCCCCCCCcceEeecccccCCCCC---ccccCCCccce
Q 003385 417 SITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPI--PDFSGCPDLRIIHLEDNQLTGPLP---SSLMNLPNLRE 491 (824)
Q Consensus 417 ~L~~L~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~--p~~~~l~~L~~L~L~~N~l~g~lP---~~l~~l~~L~~ 491 (824)
+|+.|+|++|++++.+|..+.++++|+.|+|++|+|++.+ +.+..+++|+.|+|++|+|++..+ ..+..+++|+.
T Consensus 72 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~ 151 (168)
T 2ell_A 72 KLKKLELSENRIFGGLDMLAEKLPNLTHLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTY 151 (168)
T ss_dssp SCCEEEEESCCCCSCCCHHHHHCTTCCEEECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCE
T ss_pred CCCEEECcCCcCchHHHHHHhhCCCCCEEeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcE
Confidence 9999999999999779999999999999999999999976 569999999999999999995444 48999999999
Q ss_pred eeecccccccccccc
Q 003385 492 LYVQNNMLSGTVPSS 506 (824)
Q Consensus 492 L~l~~N~l~g~ip~~ 506 (824)
|++++|.+. .+|.+
T Consensus 152 L~l~~n~~~-~~~~~ 165 (168)
T 2ell_A 152 LDGYDREDQ-EAPDS 165 (168)
T ss_dssp ETTEETTSC-BCCSS
T ss_pred ecCCCCChh-hcccc
Confidence 999999999 77764
No 282
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.52 E-value=3.2e-14 Score=150.81 Aligned_cols=138 Identities=20% Similarity=0.159 Sum_probs=119.1
Q ss_pred cccceeeecccccCCCCCCcc-cchhhhceeccCCCCCCcHHHHHHHHHhcCCCCcccCCCCCCCCCCCCeeEcCCCCCC
Q 003385 338 SLPFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQP 416 (824)
Q Consensus 338 ~l~~l~~L~L~~n~~s~LPP~-i~~le~l~~L~l~~n~~~~~~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~c~~~~~~ 416 (824)
.+++|+.|+|+.|.++.+|+. +..++.|+.|+++.|.+.. ..+. ....++
T Consensus 83 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-------------------~~~~----------~~~~l~ 133 (272)
T 3rfs_A 83 ELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQS-------------------LPDG----------VFDKLT 133 (272)
T ss_dssp TCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCC-------------------CCTT----------TTTTCT
T ss_pred CCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCc-------------------cCHH----------HhccCC
Confidence 467899999999999999998 7999999999999997663 1110 013467
Q ss_pred ceeEEEecCCCCCccCChhhhcccccccccccccccCCCCCC-CCCCCCcceEeecccccCCCCCccccCCCccceeeec
Q 003385 417 SITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQ 495 (824)
Q Consensus 417 ~L~~L~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~L~~L~l~ 495 (824)
+|+.|+|++|++++..|..++++++|+.|+|++|++++.++. +.++++|+.|+|++|+|++..|..++.+++|+.|+|+
T Consensus 134 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~ 213 (272)
T 3rfs_A 134 NLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLH 213 (272)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEcc
Confidence 899999999999976667789999999999999999998887 7889999999999999998778889999999999999
Q ss_pred ccccccccc
Q 003385 496 NNMLSGTVP 504 (824)
Q Consensus 496 ~N~l~g~ip 504 (824)
+|++.+..|
T Consensus 214 ~N~~~~~~~ 222 (272)
T 3rfs_A 214 DNPWDCTCP 222 (272)
T ss_dssp SSCBCCCTT
T ss_pred CCCccccCc
Confidence 999997766
No 283
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.52 E-value=4.6e-15 Score=157.38 Aligned_cols=180 Identities=13% Similarity=0.111 Sum_probs=126.9
Q ss_pred ccceeeecccccCCCCCCcc-cchhhhceeccCCCCCCcHHHHHHHHHhcCCCCcccCCCCCCCCCCCCeeEc-CCCCCC
Q 003385 339 LPFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQC-NSDPQP 416 (824)
Q Consensus 339 l~~l~~L~L~~n~~s~LPP~-i~~le~l~~L~l~~n~~~~~~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~c-~~~~~~ 416 (824)
++.|+.|+|+.|.++.+++. +..+..|+.|+++.|.+.......+..+..+.......+.- ..+.. ....++
T Consensus 51 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l------~~~~~~~~~~l~ 124 (276)
T 2z62_A 51 FPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNL------ASLENFPIGHLK 124 (276)
T ss_dssp CTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCC------CCSTTCCCTTCT
T ss_pred ccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCc------cccCchhcccCC
Confidence 45677777777777777773 77777777777777776543322333333333222111110 00000 124567
Q ss_pred ceeEEEecCCCCCc-cCChhhhcccccccccccccccCCCCCC-CCCCCCcc----eEeecccccCCCCCccccCCCccc
Q 003385 417 SITVIHLSSKNLTG-NIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLR----IIHLEDNQLTGPLPSSLMNLPNLR 490 (824)
Q Consensus 417 ~L~~L~L~~n~l~g-~lp~~i~~L~~L~~L~L~~N~l~~~~p~-~~~l~~L~----~L~L~~N~l~g~lP~~l~~l~~L~ 490 (824)
+|++|+|++|++++ .+|..+++|++|+.|+|++|++++.++. +..+++|+ .|+|++|+|++ +|.......+|+
T Consensus 125 ~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~-~~~~~~~~~~L~ 203 (276)
T 2z62_A 125 TLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNF-IQPGAFKEIRLK 203 (276)
T ss_dssp TCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSCCCE-ECTTSSCSCCEE
T ss_pred CCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCcccc-cCccccCCCccc
Confidence 99999999999986 3799999999999999999999998774 66666666 89999999994 554455556899
Q ss_pred eeeeccccccccccccccc---cceeccccCCccccCCC
Q 003385 491 ELYVQNNMLSGTVPSSLLS---KNVVLNYAGNINLHEGG 526 (824)
Q Consensus 491 ~L~l~~N~l~g~ip~~l~~---~~~~l~~~~n~~lc~~~ 526 (824)
.|+|++|+++ .+|..++. .+..+.+++|+..|.++
T Consensus 204 ~L~L~~n~l~-~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 204 ELALDTNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp EEECCSSCCS-CCCTTTTTTCCSCCEEECCSSCBCCCTT
T ss_pred EEECCCCcee-ecCHhHhcccccccEEEccCCcccccCC
Confidence 9999999999 77777654 34677889999998774
No 284
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.52 E-value=2.1e-14 Score=147.43 Aligned_cols=133 Identities=17% Similarity=0.185 Sum_probs=114.9
Q ss_pred cceeeecccccCCCCCCc-ccchhhhceeccCCCCCCcHHHHHHHHHhcCCCCcccCCCCCCCCCCCCeeEcCCCCCCce
Q 003385 340 PFVLSFKFGKTYDSSRGP-LLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 418 (824)
Q Consensus 340 ~~l~~L~L~~n~~s~LPP-~i~~le~l~~L~l~~n~~~~~~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~c~~~~~~~L 418 (824)
+.|+.|+|+.|.++.+|+ .+..++.|+.|+++.|++... .|- ....+++|
T Consensus 32 ~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~-------------------~~~----------~~~~l~~L 82 (220)
T 2v9t_B 32 ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISEL-------------------APD----------AFQGLRSL 82 (220)
T ss_dssp TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEE-------------------CTT----------TTTTCSSC
T ss_pred cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCc-------------------CHH----------HhhCCcCC
Confidence 468899999999999999 499999999999999987631 000 11346799
Q ss_pred eEEEecCCCCCccCChhhhcccccccccccccccCCCCCC-CCCCCCcceEeecccccCCCCCccccCCCccceeeeccc
Q 003385 419 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNN 497 (824)
Q Consensus 419 ~~L~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~L~~L~l~~N 497 (824)
+.|+|++|+|++..+..|.+|++|+.|+|++|+|++.+|. |.++++|+.|+|++|+|++..|..|..+++|+.|+|++|
T Consensus 83 ~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 162 (220)
T 2v9t_B 83 NSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQN 162 (220)
T ss_dssp CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCC
Confidence 9999999999944445578999999999999999999886 899999999999999999777778999999999999999
Q ss_pred cccc
Q 003385 498 MLSG 501 (824)
Q Consensus 498 ~l~g 501 (824)
++..
T Consensus 163 ~~~c 166 (220)
T 2v9t_B 163 PFIC 166 (220)
T ss_dssp CEEC
T ss_pred CcCC
Confidence 9974
No 285
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.52 E-value=3.7e-14 Score=143.82 Aligned_cols=136 Identities=19% Similarity=0.165 Sum_probs=100.5
Q ss_pred cceeeecccccCCCCCCcc-cchhhhceeccCCCCCCcHHHHHHHHHhcCCCCcccCCCCCCCCCCCCeeEcCCCCCCce
Q 003385 340 PFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 418 (824)
Q Consensus 340 ~~l~~L~L~~n~~s~LPP~-i~~le~l~~L~l~~n~~~~~~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~c~~~~~~~L 418 (824)
+.|+.|+|+.|.++.+|+. +..++.|+.|+++.|.+.. ..+. ....+++|
T Consensus 28 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-------------------~~~~----------~~~~l~~L 78 (208)
T 2o6s_A 28 AQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQS-------------------LPNG----------VFNKLTSL 78 (208)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCC-------------------CCTT----------TTTTCTTC
T ss_pred CCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCc-------------------cChh----------hcCCCCCc
Confidence 4677888888888888886 6788888888888886652 0000 01235678
Q ss_pred eEEEecCCCCCccCChhhhcccccccccccccccCCCCCC-CCCCCCcceEeecccccCCCCCccccCCCccceeeeccc
Q 003385 419 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNN 497 (824)
Q Consensus 419 ~~L~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~L~~L~l~~N 497 (824)
++|+|++|+|++..+..|.++++|+.|+|++|+|++.++. +.++++|+.|+|++|+|++..+..+..+++|+.|+|++|
T Consensus 79 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N 158 (208)
T 2o6s_A 79 TYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDN 158 (208)
T ss_dssp CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSC
T ss_pred CEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCC
Confidence 8888888888855555677888888888888888887776 677888888888888888655556788888888888888
Q ss_pred ccccccc
Q 003385 498 MLSGTVP 504 (824)
Q Consensus 498 ~l~g~ip 504 (824)
++.+..|
T Consensus 159 ~~~~~~~ 165 (208)
T 2o6s_A 159 PWDCTCP 165 (208)
T ss_dssp CBCCCTT
T ss_pred CeecCCC
Confidence 7775544
No 286
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.52 E-value=3.7e-14 Score=146.51 Aligned_cols=136 Identities=18% Similarity=0.133 Sum_probs=116.9
Q ss_pred cceeeecccccCCCCCCcc-cchhhhceeccCCCCCCcHHHHHHHHHhcCCCCcccCCCCCCCCCCCCeeEcCCCCCCce
Q 003385 340 PFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 418 (824)
Q Consensus 340 ~~l~~L~L~~n~~s~LPP~-i~~le~l~~L~l~~n~~~~~~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~c~~~~~~~L 418 (824)
++|+.|+|+.|.++.++|. +..++.|+.|+++.|.+.. -.+. ....+++|
T Consensus 40 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~-------------------i~~~----------~~~~l~~L 90 (229)
T 3e6j_A 40 TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGA-------------------LPVG----------VFDSLTQL 90 (229)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC-------------------CCTT----------TTTTCTTC
T ss_pred CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCC-------------------cChh----------hcccCCCc
Confidence 6789999999999999765 8999999999999997753 1110 01346799
Q ss_pred eEEEecCCCCCccCChhhhcccccccccccccccCCCCCCCCCCCCcceEeecccccCCCCCccccCCCccceeeecccc
Q 003385 419 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNM 498 (824)
Q Consensus 419 ~~L~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~L~~L~l~~N~ 498 (824)
+.|+|++|+|++..+..|..|++|+.|+|++|+|+.++..+..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+
T Consensus 91 ~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 170 (229)
T 3e6j_A 91 TVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLTELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNP 170 (229)
T ss_dssp CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCSCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSC
T ss_pred CEEECCCCcCCccChhHhCcchhhCeEeccCCcccccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCC
Confidence 99999999999666667899999999999999999887789999999999999999996666789999999999999999
Q ss_pred cccccc
Q 003385 499 LSGTVP 504 (824)
Q Consensus 499 l~g~ip 504 (824)
+.+..+
T Consensus 171 ~~c~c~ 176 (229)
T 3e6j_A 171 WDCECR 176 (229)
T ss_dssp BCTTBG
T ss_pred ccCCcc
Confidence 996554
No 287
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.52 E-value=8.7e-15 Score=161.84 Aligned_cols=155 Identities=20% Similarity=0.171 Sum_probs=126.2
Q ss_pred ceeeecccccCCCCCCcc-cc-hhhhceeccCCCCCCcHHHHHHHHHhcCCCCcccCCCCCCCCCCCCeeEcCCCCCCce
Q 003385 341 FVLSFKFGKTYDSSRGPL-LN-AMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 418 (824)
Q Consensus 341 ~l~~L~L~~n~~s~LPP~-i~-~le~l~~L~l~~n~~~~~~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~c~~~~~~~L 418 (824)
.++.|+|+.|.++.+|+. +. .+..|+.|+++.|.+... .+- ....+++|
T Consensus 40 ~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i-------------------~~~----------~~~~l~~L 90 (361)
T 2xot_A 40 YTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFI-------------------SSE----------AFVPVPNL 90 (361)
T ss_dssp TCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEE-------------------CTT----------TTTTCTTC
T ss_pred CCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCcc-------------------Chh----------hccCCCCC
Confidence 467899999999999998 44 899999999999987631 000 12346799
Q ss_pred eEEEecCCCCCccCChhhhcccccccccccccccCCCCCC-CCCCCCcceEeecccccCCCCCccc----cCCCccceee
Q 003385 419 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSL----MNLPNLRELY 493 (824)
Q Consensus 419 ~~L~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~g~lP~~l----~~l~~L~~L~ 493 (824)
+.|+|++|+|++..+..|.+|++|+.|+|++|+|+++.|. |.++++|+.|+|++|+|+ .+|..+ ..+++|+.|+
T Consensus 91 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~~~~l~~L~~L~ 169 (361)
T 2xot_A 91 RYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQIS-RFPVELIKDGNKLPKLMLLD 169 (361)
T ss_dssp CEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC-SCCGGGTC----CTTCCEEE
T ss_pred CEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCC-eeCHHHhcCcccCCcCCEEE
Confidence 9999999999977677899999999999999999998875 999999999999999999 566554 6799999999
Q ss_pred eccccccccccccccccc-----eeccccCCccccCCC
Q 003385 494 VQNNMLSGTVPSSLLSKN-----VVLNYAGNINLHEGG 526 (824)
Q Consensus 494 l~~N~l~g~ip~~l~~~~-----~~l~~~~n~~lc~~~ 526 (824)
|++|+|+ .+|...+..+ ..+.+.+|+..|.+.
T Consensus 170 L~~N~l~-~l~~~~~~~l~~~~l~~l~l~~N~~~C~C~ 206 (361)
T 2xot_A 170 LSSNKLK-KLPLTDLQKLPAWVKNGLYLHNNPLECDCK 206 (361)
T ss_dssp CCSSCCC-CCCHHHHHHSCHHHHTTEECCSSCEECCHH
T ss_pred CCCCCCC-ccCHHHhhhccHhhcceEEecCCCccCCcC
Confidence 9999999 7776554433 346789999999763
No 288
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.50 E-value=4e-14 Score=168.40 Aligned_cols=183 Identities=16% Similarity=0.120 Sum_probs=128.8
Q ss_pred cceeeecccccCCCCCCcc-cc-------hhhhceeccCCCCCCcHHHHHHHHHhcCCCCcccCCCCCCCCCCCCeeEcC
Q 003385 340 PFVLSFKFGKTYDSSRGPL-LN-------AMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCN 411 (824)
Q Consensus 340 ~~l~~L~L~~n~~s~LPP~-i~-------~le~l~~L~l~~n~~~~~~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~c~ 411 (824)
++|+.|+|+.|.++...|. |. .+..|+.|+++.|.+.......++.+..+.....+++.-. ..+-......
T Consensus 402 ~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~ 480 (636)
T 4eco_A 402 SVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLT-EIPKNSLKDE 480 (636)
T ss_dssp SCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCS-BCCSSSSEET
T ss_pred CccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCC-CcCHHHhccc
Confidence 3556666666666554333 44 4556666666666655332222333333333222111111 1111111100
Q ss_pred ---CCCCCceeEEEecCCCCCccCChhhh--cccccccccccccccCCCCCCCCCCCCcceEee------cccccCCCCC
Q 003385 412 ---SDPQPSITVIHLSSKNLTGNIPSDLT--KLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHL------EDNQLTGPLP 480 (824)
Q Consensus 412 ---~~~~~~L~~L~L~~n~l~g~lp~~i~--~L~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L------~~N~l~g~lP 480 (824)
..++++|+.|+|++|+|+ .+|..+. .+++|+.|+|++|+|+++++.+.++++|+.|+| ++|++.+.+|
T Consensus 481 ~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p 559 (636)
T 4eco_A 481 NENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSKFPTQPLNSSTLKGFGIRNQRDAQGNRTLREWP 559 (636)
T ss_dssp TEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSSCCCGGGGCSSCCEEECCSCBCTTCCBCCCCCC
T ss_pred cccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCCcChhhhcCCCCCEEECCCCcccccCcccccCh
Confidence 122348999999999999 8999998 999999999999999996666999999999999 5688999999
Q ss_pred ccccCCCccceeeeccccccccccccccccceeccccCCccccCC
Q 003385 481 SSLMNLPNLRELYVQNNMLSGTVPSSLLSKNVVLNYAGNINLHEG 525 (824)
Q Consensus 481 ~~l~~l~~L~~L~l~~N~l~g~ip~~l~~~~~~l~~~~n~~lc~~ 525 (824)
..++++++|+.|+|++|++ +.+|..+...+..+.+++|+..|.+
T Consensus 560 ~~l~~l~~L~~L~Ls~N~l-~~ip~~~~~~L~~L~Ls~N~l~~~~ 603 (636)
T 4eco_A 560 EGITLCPSLTQLQIGSNDI-RKVNEKITPNISVLDIKDNPNISID 603 (636)
T ss_dssp TTGGGCSSCCEEECCSSCC-CBCCSCCCTTCCEEECCSCTTCEEE
T ss_pred HHHhcCCCCCEEECCCCcC-CccCHhHhCcCCEEECcCCCCcccc
Confidence 9999999999999999999 5999999988889999999877744
No 289
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.49 E-value=2.3e-14 Score=144.25 Aligned_cols=149 Identities=16% Similarity=0.141 Sum_probs=117.5
Q ss_pred ccccceeeecccccCCCCCCcccchhhhceeccCCCCCCcHHHHHHHHHhcCCCCcccCCCCCCCCCCCCeeEcCCCCCC
Q 003385 337 LSLPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQP 416 (824)
Q Consensus 337 ~~l~~l~~L~L~~n~~s~LPP~i~~le~l~~L~l~~n~~~~~~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~c~~~~~~ 416 (824)
..++.|+.|+|+.|.++.+| .+..++.|+.|+++.|.+.. . . ....++
T Consensus 41 ~~l~~L~~L~l~~n~i~~l~-~l~~l~~L~~L~l~~n~~~~--------------~-------------~----~l~~l~ 88 (197)
T 4ezg_A 41 AQMNSLTYITLANINVTDLT-GIEYAHNIKDLTINNIHATN--------------Y-------------N----PISGLS 88 (197)
T ss_dssp HHHHTCCEEEEESSCCSCCT-TGGGCTTCSEEEEESCCCSC--------------C-------------G----GGTTCT
T ss_pred hhcCCccEEeccCCCccChH-HHhcCCCCCEEEccCCCCCc--------------c-------------h----hhhcCC
Confidence 45678899999999999998 68999999999999885542 0 0 012356
Q ss_pred ceeEEEecCCCCCccCChhhhcccccccccccccccCCCCCC-CCCCCCcceEeecccc-cCCCCCccccCCCccceeee
Q 003385 417 SITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQ-LTGPLPSSLMNLPNLRELYV 494 (824)
Q Consensus 417 ~L~~L~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~L~~N~-l~g~lP~~l~~l~~L~~L~l 494 (824)
+|++|+|++|++++..|..|++|++|+.|+|++|++++..+. +.++++|+.|+|++|+ ++ .+| .++.+++|+.|++
T Consensus 89 ~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l 166 (197)
T 4ezg_A 89 NLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNI 166 (197)
T ss_dssp TCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEEC
T ss_pred CCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEEC
Confidence 899999999999987888899999999999999999886554 8889999999999998 55 676 6889999999999
Q ss_pred cccccccccc-ccccccceeccccCCc
Q 003385 495 QNNMLSGTVP-SSLLSKNVVLNYAGNI 520 (824)
Q Consensus 495 ~~N~l~g~ip-~~l~~~~~~l~~~~n~ 520 (824)
++|++++ ++ -.-+..+..+.+++|.
T Consensus 167 ~~n~i~~-~~~l~~l~~L~~L~l~~N~ 192 (197)
T 4ezg_A 167 QFDGVHD-YRGIEDFPKLNQLYAFSQT 192 (197)
T ss_dssp TTBCCCC-CTTGGGCSSCCEEEECBC-
T ss_pred CCCCCcC-hHHhccCCCCCEEEeeCcc
Confidence 9999984 54 2224445666777774
No 290
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.49 E-value=7.6e-14 Score=140.28 Aligned_cols=107 Identities=23% Similarity=0.289 Sum_probs=76.4
Q ss_pred ceeEEEecCCCCCccCChhhhcccccccccccccccCCCCCC-CCCCCCcceEeecccccCCCCCccccCCCccceeeec
Q 003385 417 SITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQ 495 (824)
Q Consensus 417 ~L~~L~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~L~~L~l~ 495 (824)
+|++|+|++|+|+ .+|..|.++++|+.|+|++|+|+++++. |.++++|+.|+|++|+|++..|..|+.+++|+.|+|+
T Consensus 32 ~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~ 110 (193)
T 2wfh_A 32 DVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLH 110 (193)
T ss_dssp TCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECC
T ss_pred CCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEECC
Confidence 5677777777777 6777777777777777777777777664 7777777777777777776666677777777777777
Q ss_pred cccccccccccccc---cceeccccCCccccCC
Q 003385 496 NNMLSGTVPSSLLS---KNVVLNYAGNINLHEG 525 (824)
Q Consensus 496 ~N~l~g~ip~~l~~---~~~~l~~~~n~~lc~~ 525 (824)
+|+|+ .+|...+. .+..+.+.+|+..|.+
T Consensus 111 ~N~l~-~~~~~~~~~l~~L~~L~L~~N~~~C~c 142 (193)
T 2wfh_A 111 GNDIS-VVPEGAFNDLSALSHLAIGANPLYCDC 142 (193)
T ss_dssp SSCCC-BCCTTTTTTCTTCCEEECCSSCEECSG
T ss_pred CCCCC-eeChhhhhcCccccEEEeCCCCeecCC
Confidence 77777 66665443 3355666777777755
No 291
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.48 E-value=1.6e-13 Score=139.18 Aligned_cols=151 Identities=21% Similarity=0.165 Sum_probs=123.1
Q ss_pred eecccccCCCCCCcccchhhhceeccCCCCCCcHHHHHHHHHhcCCCCcccCCCCCCCCCCCCeeEcCCCCCCceeEEEe
Q 003385 344 SFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSITVIHL 423 (824)
Q Consensus 344 ~L~L~~n~~s~LPP~i~~le~l~~L~l~~n~~~~~~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~c~~~~~~~L~~L~L 423 (824)
.+++..+.++.+|..+. +.++.|+++.|.+.. ..+- ....+++|++|+|
T Consensus 11 ~v~c~~~~l~~~p~~~~--~~l~~L~l~~n~l~~-------------------~~~~----------~~~~l~~L~~L~l 59 (208)
T 2o6s_A 11 TVECYSQGRTSVPTGIP--AQTTYLDLETNSLKS-------------------LPNG----------VFDELTSLTQLYL 59 (208)
T ss_dssp EEECCSSCCSSCCSCCC--TTCSEEECCSSCCCC-------------------CCTT----------TTTTCTTCSEEEC
T ss_pred EEEecCCCccCCCCCCC--CCCcEEEcCCCccCc-------------------CChh----------hhcccccCcEEEC
Confidence 45668899999998764 589999999987663 0000 0134579999999
Q ss_pred cCCCCCccCChhhhcccccccccccccccCCCCCC-CCCCCCcceEeecccccCCCCCccccCCCccceeeecccccccc
Q 003385 424 SSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNMLSGT 502 (824)
Q Consensus 424 ~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~L~~L~l~~N~l~g~ 502 (824)
++|++++..+..|.++++|+.|+|++|+|++.++. +.++++|+.|+|++|+|++..+..++++++|+.|+|++|+++ .
T Consensus 60 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~ 138 (208)
T 2o6s_A 60 GGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLK-S 138 (208)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCS-C
T ss_pred CCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccc-e
Confidence 99999965566789999999999999999998887 789999999999999999766677999999999999999999 6
Q ss_pred ccccccc---cceeccccCCccccCCC
Q 003385 503 VPSSLLS---KNVVLNYAGNINLHEGG 526 (824)
Q Consensus 503 ip~~l~~---~~~~l~~~~n~~lc~~~ 526 (824)
+|...+. .+..+.+.+|+..|..+
T Consensus 139 ~~~~~~~~l~~L~~L~l~~N~~~~~~~ 165 (208)
T 2o6s_A 139 VPDGVFDRLTSLQYIWLHDNPWDCTCP 165 (208)
T ss_dssp CCTTTTTTCTTCCEEECCSCCBCCCTT
T ss_pred eCHHHhccCCCccEEEecCCCeecCCC
Confidence 7766543 45677889998877654
No 292
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.48 E-value=8e-14 Score=151.77 Aligned_cols=174 Identities=17% Similarity=0.211 Sum_probs=119.8
Q ss_pred cceeeecccccCCCCCCcc-cchhhhceeccCCCCCCcH--HHHHHHHHhcCCCCcccCCCCCCCCCCCCeeEcCCCCCC
Q 003385 340 PFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDG--VAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQP 416 (824)
Q Consensus 340 ~~l~~L~L~~n~~s~LPP~-i~~le~l~~L~l~~n~~~~--~~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~c~~~~~~ 416 (824)
++|++|+|+.|.++.+++. +..+..|+.|+++.|.+.. .....+..+..+.......+. ...++ ..-.+
T Consensus 121 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~------l~~l~--~~~~~ 192 (330)
T 1xku_A 121 KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTN------ITTIP--QGLPP 192 (330)
T ss_dssp TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSC------CCSCC--SSCCT
T ss_pred ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCc------cccCC--ccccc
Confidence 3556666666666666554 5666666666666665532 111122222222222111100 00111 01126
Q ss_pred ceeEEEecCCCCCccCChhhhcccccccccccccccCCCCCC-CCCCCCcceEeecccccCCCCCccccCCCccceeeec
Q 003385 417 SITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQ 495 (824)
Q Consensus 417 ~L~~L~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~L~~L~l~ 495 (824)
+|++|+|++|++++..|..|.++++|+.|+|++|++++.++. +.++++|+.|+|++|+|+ .+|..+..+++|+.|+|+
T Consensus 193 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~ 271 (330)
T 1xku_A 193 SLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLH 271 (330)
T ss_dssp TCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECC
T ss_pred cCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECC
Confidence 899999999999988889999999999999999999998884 889999999999999999 899999999999999999
Q ss_pred cccccccccccccc---------cceeccccCCcccc
Q 003385 496 NNMLSGTVPSSLLS---------KNVVLNYAGNINLH 523 (824)
Q Consensus 496 ~N~l~g~ip~~l~~---------~~~~l~~~~n~~lc 523 (824)
+|+++ .+|...+. ....+.+.+|+..+
T Consensus 272 ~N~i~-~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~ 307 (330)
T 1xku_A 272 NNNIS-AIGSNDFCPPGYNTKKASYSGVSLFSNPVQY 307 (330)
T ss_dssp SSCCC-CCCTTSSSCSSCCTTSCCCSEEECCSSSSCG
T ss_pred CCcCC-ccChhhcCCcccccccccccceEeecCcccc
Confidence 99999 67766552 22456677887543
No 293
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.48 E-value=4.3e-14 Score=149.56 Aligned_cols=158 Identities=20% Similarity=0.172 Sum_probs=116.4
Q ss_pred ccceeeecccccCCCCCCcc-cchhhhceeccCCCCCCcHHHHHHHHHhcCCCCcccCCCCCCCCCCCCeeEc-CCCCCC
Q 003385 339 LPFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQC-NSDPQP 416 (824)
Q Consensus 339 l~~l~~L~L~~n~~s~LPP~-i~~le~l~~L~l~~n~~~~~~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~c-~~~~~~ 416 (824)
+++|++|+|+.|.++.+|+. +..++.|+.|+++.|.+.......+..+..++.+..+++. ...+.- ....++
T Consensus 60 l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~------l~~~~~~~~~~l~ 133 (270)
T 2o6q_A 60 LTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQ------LKSLPPRVFDSLT 133 (270)
T ss_dssp CTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSC------CCCCCTTTTTTCT
T ss_pred CCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCc------cCeeCHHHhCcCc
Confidence 56677777788888777776 4677778888887776654322222333333333221111 111111 124578
Q ss_pred ceeEEEecCCCCCccCChhhhcccccccccccccccCCCCCC-CCCCCCcceEeecccccCCCCCccccCCCccceeeec
Q 003385 417 SITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQ 495 (824)
Q Consensus 417 ~L~~L~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~L~~L~l~ 495 (824)
+|+.|+|++|+|++..+..|..+++|+.|+|++|++++.++. |.++++|+.|+|++|+|++..+..+..+++|+.|+|+
T Consensus 134 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~ 213 (270)
T 2o6q_A 134 KLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQ 213 (270)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEec
Confidence 999999999999965556689999999999999999999886 8999999999999999996666679999999999999
Q ss_pred ccccccc
Q 003385 496 NNMLSGT 502 (824)
Q Consensus 496 ~N~l~g~ 502 (824)
+|++...
T Consensus 214 ~N~~~c~ 220 (270)
T 2o6q_A 214 ENPWDCT 220 (270)
T ss_dssp SSCBCCS
T ss_pred CCCeeCC
Confidence 9999743
No 294
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.48 E-value=8.5e-15 Score=157.66 Aligned_cols=185 Identities=15% Similarity=0.082 Sum_probs=135.5
Q ss_pred cccceeeecccccCCCCCCc--ccchhhhceeccCCCCCCcHHHHHHHHHhcCCCCcccCCCCCCCCCCCCeeEcCCCCC
Q 003385 338 SLPFVLSFKFGKTYDSSRGP--LLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQ 415 (824)
Q Consensus 338 ~l~~l~~L~L~~n~~s~LPP--~i~~le~l~~L~l~~n~~~~~~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~c~~~~~ 415 (824)
.+++|+.|+|+.|.++.+|+ .+..++.|+.|+++.|.+.......+..+..+..+...++. - ....+.-....+
T Consensus 99 ~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~-l---~~~~~~~~~~~l 174 (306)
T 2z66_A 99 GLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNS-F---QENFLPDIFTEL 174 (306)
T ss_dssp TCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCE-E---GGGEECSCCTTC
T ss_pred CCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCc-c---ccccchhHHhhC
Confidence 36788889999999998886 58888899999998887664332223333333333221110 0 000112223467
Q ss_pred CceeEEEecCCCCCccCChhhhcccccccccccccccCCCCCC-CCCCCCcceEeecccccCCCCCccccCCC-ccceee
Q 003385 416 PSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLP-NLRELY 493 (824)
Q Consensus 416 ~~L~~L~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~g~lP~~l~~l~-~L~~L~ 493 (824)
++|+.|+|++|++++..|..|.++++|+.|+|++|++++.++. +.++++|+.|+|++|+|++..|..+..++ +|+.|+
T Consensus 175 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~ 254 (306)
T 2z66_A 175 RNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLN 254 (306)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEE
T ss_pred cCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEE
Confidence 8999999999999988899999999999999999999998884 89999999999999999999999999995 999999
Q ss_pred ecccccccccccc----ccccceeccccCCccccCCC
Q 003385 494 VQNNMLSGTVPSS----LLSKNVVLNYAGNINLHEGG 526 (824)
Q Consensus 494 l~~N~l~g~ip~~----l~~~~~~l~~~~n~~lc~~~ 526 (824)
|++|++++..+.. .+.....+....+...|..+
T Consensus 255 L~~N~~~~~c~~~~~~~~l~~~~~~~~~~~~~~C~~p 291 (306)
T 2z66_A 255 LTQNDFACTCEHQSFLQWIKDQRQLLVEVERMECATP 291 (306)
T ss_dssp CTTCCEECSGGGHHHHHHHHHTGGGBSCGGGCBEEES
T ss_pred ccCCCeecccChHHHHHHHHhhhhhhccccccccCCc
Confidence 9999998654321 12222333445566677655
No 295
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.48 E-value=1e-14 Score=172.22 Aligned_cols=182 Identities=17% Similarity=0.151 Sum_probs=117.3
Q ss_pred cccceeeecccccCCCCCCcc-cchhhhceeccCCCCCCcHHHHHHHHHhcCCCCcccCCCC------C-----------
Q 003385 338 SLPFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGD------P----------- 399 (824)
Q Consensus 338 ~l~~l~~L~L~~n~~s~LPP~-i~~le~l~~L~l~~n~~~~~~l~~lk~~~~~~~w~~~~~d------p----------- 399 (824)
.+++|+.|+|+.|.++.+||. +..+..|+.|+++.|.+....+..+..+.. .....+. |
T Consensus 145 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~---L~l~~n~l~~l~~~~~L~~L~ls~n 221 (597)
T 3oja_B 145 NTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFH---ANVSYNLLSTLAIPIAVEELDASHN 221 (597)
T ss_dssp TCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCCGGGCTTCSE---EECCSSCCSEEECCTTCSEEECCSS
T ss_pred cCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcChhhhhhhhh---hhcccCccccccCCchhheeeccCC
Confidence 466778888888888888775 778888888888877765433222222210 0000000 0
Q ss_pred -------CCCCCCCeeEc---------CCCCCCceeEEEecCCCCCccCChhhhcccccccccccccccCCCCCCCCCCC
Q 003385 400 -------CLPVPWSWLQC---------NSDPQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCP 463 (824)
Q Consensus 400 -------c~~~~~~~~~c---------~~~~~~~L~~L~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~p~~~~l~ 463 (824)
..+.....+.. ....+++|+.|+|++|.+++..|..|++|++|+.|+|++|+|+++++.+..++
T Consensus 222 ~l~~~~~~~~~~L~~L~L~~n~l~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~ 301 (597)
T 3oja_B 222 SINVVRGPVNVELTILKLQHNNLTDTAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVALNLYGQPIP 301 (597)
T ss_dssp CCCEEECSCCSCCCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCEEECSSSCCT
T ss_pred cccccccccCCCCCEEECCCCCCCCChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCCCCcccccCC
Confidence 00000001100 01235677777888888877777778888888888888888877666667777
Q ss_pred CcceEeecccccCCCCCccccCCCccceeeeccccccccccccccccceeccccCCccccC
Q 003385 464 DLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNMLSGTVPSSLLSKNVVLNYAGNINLHE 524 (824)
Q Consensus 464 ~L~~L~L~~N~l~g~lP~~l~~l~~L~~L~l~~N~l~g~ip~~l~~~~~~l~~~~n~~lc~ 524 (824)
+|+.|+|++|+|+ .+|..++.+++|+.|+|++|+++ .+|...+..+..+.+++|+..|.
T Consensus 302 ~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~L~~L~l~~N~~~~~ 360 (597)
T 3oja_B 302 TLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIV-TLKLSTHHTLKNLTLSHNDWDCN 360 (597)
T ss_dssp TCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCC-CCCCCTTCCCSEEECCSSCEEHH
T ss_pred CCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCC-CcChhhcCCCCEEEeeCCCCCCh
Confidence 8888888888887 67777777888888888888887 56666666667777777776664
No 296
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.48 E-value=1.5e-14 Score=161.30 Aligned_cols=181 Identities=17% Similarity=0.150 Sum_probs=110.4
Q ss_pred cccceeeecccccCCCCCCcc-cchhhhceeccCCCCCCcHHHHHHHHHhcCCCCcccCCCCC---CCCCCCCeeEc---
Q 003385 338 SLPFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDP---CLPVPWSWLQC--- 410 (824)
Q Consensus 338 ~l~~l~~L~L~~n~~s~LPP~-i~~le~l~~L~l~~n~~~~~~l~~lk~~~~~~~w~~~~~dp---c~~~~~~~~~c--- 410 (824)
.+++|++|+|+.|.++.++|. +..++.|+.|+++.|.+....+..+.++. ......+.. ..+.....+..
T Consensus 139 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~L~---~L~l~~n~l~~~~~~~~L~~L~l~~n 215 (390)
T 3o6n_A 139 NTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLF---HANVSYNLLSTLAIPIAVEELDASHN 215 (390)
T ss_dssp TCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCCGGGCTTCS---EEECCSSCCSEEECCSSCSEEECCSS
T ss_pred CCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCccccccccccc---eeecccccccccCCCCcceEEECCCC
Confidence 356788888888888888776 88888888888888876654333332221 100000000 00000000000
Q ss_pred ---------------------------CCCCCCceeEEEecCCCCCccCChhhhcccccccccccccccCCCCCCCCCCC
Q 003385 411 ---------------------------NSDPQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCP 463 (824)
Q Consensus 411 ---------------------------~~~~~~~L~~L~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~p~~~~l~ 463 (824)
....+++|++|+|++|++++..|..|.++++|+.|+|++|++++.+..+..++
T Consensus 216 ~l~~~~~~~~~~L~~L~l~~n~l~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~l~ 295 (390)
T 3o6n_A 216 SINVVRGPVNVELTILKLQHNNLTDTAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVALNLYGQPIP 295 (390)
T ss_dssp CCCEEECCCCSSCCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCEEECSSSCCT
T ss_pred eeeeccccccccccEEECCCCCCcccHHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcccCcccCCCC
Confidence 01234566777777777776666677777777777777777776655566677
Q ss_pred CcceEeecccccCCCCCccccCCCccceeeeccccccccccccccccceeccccCCcccc
Q 003385 464 DLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNMLSGTVPSSLLSKNVVLNYAGNINLH 523 (824)
Q Consensus 464 ~L~~L~L~~N~l~g~lP~~l~~l~~L~~L~l~~N~l~g~ip~~l~~~~~~l~~~~n~~lc 523 (824)
+|+.|+|++|+|+ .+|..++.+++|+.|+|++|+++ .+|...+..+..+.+++|+..|
T Consensus 296 ~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~~~L~~L~l~~N~~~~ 353 (390)
T 3o6n_A 296 TLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIV-TLKLSTHHTLKNLTLSHNDWDC 353 (390)
T ss_dssp TCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCC-CCCCCTTCCCSEEECCSSCEEH
T ss_pred CCCEEECCCCcce-ecCccccccCcCCEEECCCCccc-eeCchhhccCCEEEcCCCCccc
Confidence 7777777777776 56666667777777777777776 5565555556666677776555
No 297
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.47 E-value=3.2e-15 Score=164.52 Aligned_cols=181 Identities=13% Similarity=0.092 Sum_probs=131.0
Q ss_pred ccceeeecccccCCCCCCcc-cchhhhceeccCCCCCCcHHHH-HHHHHhcCCCCcccCCCCCCCCCCCCeeE-cCCCCC
Q 003385 339 LPFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVAI-VSVISLYSSADWAQEGGDPCLPVPWSWLQ-CNSDPQ 415 (824)
Q Consensus 339 l~~l~~L~L~~n~~s~LPP~-i~~le~l~~L~l~~n~~~~~~l-~~lk~~~~~~~w~~~~~dpc~~~~~~~~~-c~~~~~ 415 (824)
+++|++|+|+.|.++.+|+. +..++.|+.|+++.|++..... ..+..+..++.+...+++. ...+. .....+
T Consensus 99 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~-----~~~~~~~~~~~l 173 (353)
T 2z80_A 99 LGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDT-----FTKIQRKDFAGL 173 (353)
T ss_dssp CTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSS-----CCEECTTTTTTC
T ss_pred CCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCcc-----ccccCHHHccCC
Confidence 56788888888888888887 7888888888888887653211 1122222222221111100 11111 123456
Q ss_pred CceeEEEecCCCCCccCChhhhcccccccccccccccCCCCCC-CCCCCCcceEeecccccCCC----------------
Q 003385 416 PSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGP---------------- 478 (824)
Q Consensus 416 ~~L~~L~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~g~---------------- 478 (824)
++|++|+|++|++++..|..+.++++|+.|+|++|+++..++. +..+++|+.|+|++|++++.
T Consensus 174 ~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~ 253 (353)
T 2z80_A 174 TFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKK 253 (353)
T ss_dssp CEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCE
T ss_pred CCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccccchhhc
Confidence 7899999999999988899999999999999999998776665 45689999999999999864
Q ss_pred ---------------CCccccCCCccceeeeccccccccccccccc---cceeccccCCccccCC
Q 003385 479 ---------------LPSSLMNLPNLRELYVQNNMLSGTVPSSLLS---KNVVLNYAGNINLHEG 525 (824)
Q Consensus 479 ---------------lP~~l~~l~~L~~L~l~~N~l~g~ip~~l~~---~~~~l~~~~n~~lc~~ 525 (824)
+|+.++++++|+.|+|++|+++ .+|..++. .+..+.+++|+..|..
T Consensus 254 l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~-~i~~~~~~~l~~L~~L~L~~N~~~~~~ 317 (353)
T 2z80_A 254 FTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSC 317 (353)
T ss_dssp EEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred cccccccccCcchhhhHHHHhcccCCCEEECCCCCCC-ccCHHHHhcCCCCCEEEeeCCCccCcC
Confidence 3456788999999999999999 89988754 3467788999988865
No 298
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.46 E-value=9.1e-14 Score=147.32 Aligned_cols=138 Identities=14% Similarity=0.148 Sum_probs=115.4
Q ss_pred cceeeecccccCCCCCCc-ccchhhhceeccCCCCCCcHHHHHHHHHhcCCCCcccCCCCCCCCCCCCeeEcCCCCCCce
Q 003385 340 PFVLSFKFGKTYDSSRGP-LLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 418 (824)
Q Consensus 340 ~~l~~L~L~~n~~s~LPP-~i~~le~l~~L~l~~n~~~~~~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~c~~~~~~~L 418 (824)
+.|+.|+|+.|.++.+|+ .+..++.|+.|+++.|.+... .+- ....+++|
T Consensus 28 ~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~-------------------~~~----------~~~~l~~L 78 (276)
T 2z62_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTI-------------------EDG----------AYQSLSHL 78 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEE-------------------CTT----------TTTTCTTC
T ss_pred CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCcc-------------------CHH----------HccCCcCC
Confidence 368899999999999999 599999999999999976531 000 01345689
Q ss_pred eEEEecCCCCCccCChhhhcccccccccccccccCCCCC-CCCCCCCcceEeecccccCC-CCCccccCCCccceeeecc
Q 003385 419 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIP-DFSGCPDLRIIHLEDNQLTG-PLPSSLMNLPNLRELYVQN 496 (824)
Q Consensus 419 ~~L~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~N~l~g-~lP~~l~~l~~L~~L~l~~ 496 (824)
+.|+|++|++++..|..|.+|++|+.|+|++|++++.++ .+.++++|+.|+|++|++++ .+|..++++++|+.|+|++
T Consensus 79 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~ 158 (276)
T 2z62_A 79 STLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSS 158 (276)
T ss_dssp CEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCS
T ss_pred CEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCC
Confidence 999999999997777889999999999999999999888 48899999999999999986 3689999999999999999
Q ss_pred ccccccccccc
Q 003385 497 NMLSGTVPSSL 507 (824)
Q Consensus 497 N~l~g~ip~~l 507 (824)
|+++ .+|...
T Consensus 159 N~l~-~~~~~~ 168 (276)
T 2z62_A 159 NKIQ-SIYCTD 168 (276)
T ss_dssp SCCC-EECGGG
T ss_pred CCCC-cCCHHH
Confidence 9999 555443
No 299
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.46 E-value=1.8e-14 Score=165.10 Aligned_cols=181 Identities=21% Similarity=0.119 Sum_probs=132.8
Q ss_pred ccceeeecccccCCCCCCcc-cchhhhceeccCCCCCCcHHHHHHHHHhcCCCCcccCCCCCCCCCCCCeeEcCCCCCCc
Q 003385 339 LPFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPS 417 (824)
Q Consensus 339 l~~l~~L~L~~n~~s~LPP~-i~~le~l~~L~l~~n~~~~~~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~c~~~~~~~ 417 (824)
+++|+.|+|+.|.++.+|+. +..++.|+.|+++.|.+.......+..+..+.....++. +. ...+.-......+
T Consensus 151 l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~-~~----~~~~~~~~~~~~~ 225 (477)
T 2id5_A 151 LNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHW-PY----LDTMTPNCLYGLN 225 (477)
T ss_dssp CTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECC-TT----CCEECTTTTTTCC
T ss_pred CCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCC-cc----ccccCcccccCcc
Confidence 56777788888888888775 777778888888777665422212222222222211100 00 0111111122348
Q ss_pred eeEEEecCCCCCccCC-hhhhcccccccccccccccCCCCCC-CCCCCCcceEeecccccCCCCCccccCCCccceeeec
Q 003385 418 ITVIHLSSKNLTGNIP-SDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQ 495 (824)
Q Consensus 418 L~~L~L~~n~l~g~lp-~~i~~L~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~L~~L~l~ 495 (824)
|+.|+|++|+|+ .+| ..+.++++|+.|+|++|+|++.++. |.++++|+.|+|++|+|++..|..|.++++|+.|+|+
T Consensus 226 L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 304 (477)
T 2id5_A 226 LTSLSITHCNLT-AVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVS 304 (477)
T ss_dssp CSEEEEESSCCC-SCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECC
T ss_pred ccEEECcCCccc-ccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECC
Confidence 999999999999 555 6899999999999999999998886 8999999999999999998889999999999999999
Q ss_pred cccccccccccccc---cceeccccCCccccCCC
Q 003385 496 NNMLSGTVPSSLLS---KNVVLNYAGNINLHEGG 526 (824)
Q Consensus 496 ~N~l~g~ip~~l~~---~~~~l~~~~n~~lc~~~ 526 (824)
+|+|+ .+|...+. .+..+.+++|+..|.+.
T Consensus 305 ~N~l~-~~~~~~~~~l~~L~~L~l~~N~l~c~c~ 337 (477)
T 2id5_A 305 GNQLT-TLEESVFHSVGNLETLILDSNPLACDCR 337 (477)
T ss_dssp SSCCS-CCCGGGBSCGGGCCEEECCSSCEECSGG
T ss_pred CCcCc-eeCHhHcCCCcccCEEEccCCCccCccc
Confidence 99999 67776654 34678889999988763
No 300
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.45 E-value=2e-14 Score=155.57 Aligned_cols=105 Identities=25% Similarity=0.253 Sum_probs=59.3
Q ss_pred CCCceeEEEecCCCCCcc--CChhh--hcccccccccccccccCCCCC---C-CCCCCCcceEeecccccCCCCC-cccc
Q 003385 414 PQPSITVIHLSSKNLTGN--IPSDL--TKLSSLVELWLDGNSLTGPIP---D-FSGCPDLRIIHLEDNQLTGPLP-SSLM 484 (824)
Q Consensus 414 ~~~~L~~L~L~~n~l~g~--lp~~i--~~L~~L~~L~L~~N~l~~~~p---~-~~~l~~L~~L~L~~N~l~g~lP-~~l~ 484 (824)
.+++|++|+|++|++.|. +|..+ +++++|+.|+|++|+|++.+. . +.++++|+.|+|++|+|++.+| ..+.
T Consensus 171 ~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 250 (312)
T 1wwl_A 171 VFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCD 250 (312)
T ss_dssp CCSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCC
T ss_pred cCCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhh
Confidence 345666666666666544 23333 566666666666666663221 2 3455666666666666665554 3445
Q ss_pred CCCccceeeeccccccccccccccccceeccccCC
Q 003385 485 NLPNLRELYVQNNMLSGTVPSSLLSKNVVLNYAGN 519 (824)
Q Consensus 485 ~l~~L~~L~l~~N~l~g~ip~~l~~~~~~l~~~~n 519 (824)
.+++|+.|+|++|+|+ .+|..+...+..+.+++|
T Consensus 251 ~l~~L~~L~Ls~N~l~-~ip~~~~~~L~~L~Ls~N 284 (312)
T 1wwl_A 251 WPSQLNSLNLSFTGLK-QVPKGLPAKLSVLDLSYN 284 (312)
T ss_dssp CCTTCCEEECTTSCCS-SCCSSCCSEEEEEECCSS
T ss_pred hcCCCCEEECCCCccC-hhhhhccCCceEEECCCC
Confidence 5566666666666666 666655544455555555
No 301
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.45 E-value=6.6e-14 Score=151.33 Aligned_cols=170 Identities=18% Similarity=0.265 Sum_probs=121.3
Q ss_pred ccceeeecccccCCCCCCcccchhhhceeccCCCCCCcHHHHHHHHHhcCCCCcccCCCCCCCCCCCCeeEcCCCCCCce
Q 003385 339 LPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 418 (824)
Q Consensus 339 l~~l~~L~L~~n~~s~LPP~i~~le~l~~L~l~~n~~~~~~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~c~~~~~~~L 418 (824)
+++|+.|+|+.|.++.+|+ +..++.|+.|+++.|.+... ..+..+..++.+..+++. ...+.. ...+++|
T Consensus 62 l~~L~~L~L~~n~i~~~~~-~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L~~L~l~~n~------l~~~~~-l~~l~~L 131 (308)
T 1h6u_A 62 LNNLIGLELKDNQITDLAP-LKNLTKITELELSGNPLKNV--SAIAGLQSIKTLDLTSTQ------ITDVTP-LAGLSNL 131 (308)
T ss_dssp CTTCCEEECCSSCCCCCGG-GTTCCSCCEEECCSCCCSCC--GGGTTCTTCCEEECTTSC------CCCCGG-GTTCTTC
T ss_pred cCCCCEEEccCCcCCCChh-HccCCCCCEEEccCCcCCCc--hhhcCCCCCCEEECCCCC------CCCchh-hcCCCCC
Confidence 6788999999999999998 89999999999998887652 233333334433222111 111111 2456788
Q ss_pred eEEEecCCCCCccCChhhhcccccccccccccccCCCCCCCCCCCCcceEeecccccCCCCCccccCCCccceeeecccc
Q 003385 419 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNM 498 (824)
Q Consensus 419 ~~L~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~L~~L~l~~N~ 498 (824)
+.|+|++|++++ +|. ++++++|+.|+|++|++++.++ +.++++|+.|+|++|+|++ +|. +..+++|+.|+|++|+
T Consensus 132 ~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~L~~N~ 206 (308)
T 1h6u_A 132 QVLYLDLNQITN-ISP-LAGLTNLQYLSIGNAQVSDLTP-LANLSKLTTLKADDNKISD-ISP-LASLPNLIEVHLKNNQ 206 (308)
T ss_dssp CEEECCSSCCCC-CGG-GGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCC-CGG-GGGCTTCCEEECTTSC
T ss_pred CEEECCCCccCc-Ccc-ccCCCCccEEEccCCcCCCChh-hcCCCCCCEEECCCCccCc-Chh-hcCCCCCCEEEccCCc
Confidence 999999998884 444 8888899999999998888766 8888899999999999884 444 8888889999999999
Q ss_pred ccccccccccccceeccccCCcccc
Q 003385 499 LSGTVPSSLLSKNVVLNYAGNINLH 523 (824)
Q Consensus 499 l~g~ip~~l~~~~~~l~~~~n~~lc 523 (824)
+++..|-.-+..+..+.+++|+..+
T Consensus 207 l~~~~~l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 207 ISDVSPLANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp CCBCGGGTTCTTCCEEEEEEEEEEC
T ss_pred cCccccccCCCCCCEEEccCCeeec
Confidence 8854442333445666777776443
No 302
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.45 E-value=3.8e-14 Score=174.17 Aligned_cols=108 Identities=29% Similarity=0.292 Sum_probs=83.0
Q ss_pred CCceeEEEecCCCCC-----ccCChhhhcccccccccccccccCCCCCC-CCCCCCcceEeecccccCCCCCccccCCCc
Q 003385 415 QPSITVIHLSSKNLT-----GNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPN 488 (824)
Q Consensus 415 ~~~L~~L~L~~n~l~-----g~lp~~i~~L~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~ 488 (824)
+++|+.|+|++|.++ +..|..|.+|++|+.|+|++|+|++.+|. |.++++|+.|+|++|+|++..|..+. ++
T Consensus 450 ~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~ 527 (844)
T 3j0a_A 450 NPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--AN 527 (844)
T ss_dssp CTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SC
T ss_pred CCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--cc
Confidence 345555666666554 33445678889999999999999998886 78899999999999999966555555 78
Q ss_pred cceeeeccccccccccccccccceeccccCCccccCC
Q 003385 489 LRELYVQNNMLSGTVPSSLLSKNVVLNYAGNINLHEG 525 (824)
Q Consensus 489 L~~L~l~~N~l~g~ip~~l~~~~~~l~~~~n~~lc~~ 525 (824)
|+.|+|++|+|+|..|. .+..+..+.+.+|+..|.+
T Consensus 528 L~~L~Ls~N~l~~~~~~-~~~~L~~l~l~~Np~~C~c 563 (844)
T 3j0a_A 528 LEILDISRNQLLAPNPD-VFVSLSVLDITHNKFICEC 563 (844)
T ss_dssp CCEEEEEEECCCCCCSC-CCSSCCEEEEEEECCCCSS
T ss_pred ccEEECCCCcCCCCChh-HhCCcCEEEecCCCccccc
Confidence 99999999999965554 4556777888899888743
No 303
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.45 E-value=1.4e-13 Score=167.96 Aligned_cols=107 Identities=21% Similarity=0.288 Sum_probs=97.0
Q ss_pred CCceeEEEecCCCCCccCChhhh--cccccccccccccccCCCCCCCCCCCCcceEeecc------cccCCCCCccccCC
Q 003385 415 QPSITVIHLSSKNLTGNIPSDLT--KLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLED------NQLTGPLPSSLMNL 486 (824)
Q Consensus 415 ~~~L~~L~L~~n~l~g~lp~~i~--~L~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~------N~l~g~lP~~l~~l 486 (824)
+++|+.|+|++|+|+ .+|..+. .|++|+.|+|++|+|+++++.+.++++|+.|+|++ |++.+.+|..|++|
T Consensus 727 l~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L 805 (876)
T 4ecn_A 727 TYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSSFPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTC 805 (876)
T ss_dssp GGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSSCCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGC
T ss_pred cCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCccchhhhcCCCCCEEECCCCCCcccccccccChHHHhcC
Confidence 348999999999999 8999998 99999999999999999766799999999999976 88999999999999
Q ss_pred CccceeeeccccccccccccccccceeccccCCcccc
Q 003385 487 PNLRELYVQNNMLSGTVPSSLLSKNVVLNYAGNINLH 523 (824)
Q Consensus 487 ~~L~~L~l~~N~l~g~ip~~l~~~~~~l~~~~n~~lc 523 (824)
++|+.|+|++|++ +.+|..+...+..+.+++|+...
T Consensus 806 ~~L~~L~Ls~N~L-~~Ip~~l~~~L~~LdLs~N~l~~ 841 (876)
T 4ecn_A 806 PSLIQLQIGSNDI-RKVDEKLTPQLYILDIADNPNIS 841 (876)
T ss_dssp SSCCEEECCSSCC-CBCCSCCCSSSCEEECCSCTTCE
T ss_pred CCCCEEECCCCCC-CccCHhhcCCCCEEECCCCCCCc
Confidence 9999999999999 59999998888888999996443
No 304
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.45 E-value=1.1e-13 Score=163.31 Aligned_cols=138 Identities=15% Similarity=0.159 Sum_probs=118.5
Q ss_pred ceeeecccccCCCCCCcc-cchhhhceeccCCCCCCcHHHHHHHHHhcCCCCcccCCCCCCCCCCCCeeEcCCCCCCcee
Q 003385 341 FVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSIT 419 (824)
Q Consensus 341 ~l~~L~L~~n~~s~LPP~-i~~le~l~~L~l~~n~~~~~~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~c~~~~~~~L~ 419 (824)
.++.|+|+.|.++.+||. |.+++.|+.|+|+.|.+..+ ++- ...++++|+
T Consensus 53 ~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i-------------------~~~----------~f~~L~~L~ 103 (635)
T 4g8a_A 53 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTI-------------------EDG----------AYQSLSHLS 103 (635)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEE-------------------CTT----------TTTTCTTCC
T ss_pred CCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCc-------------------Chh----------HhcCCCCCC
Confidence 678999999999999986 99999999999999987631 100 113567999
Q ss_pred EEEecCCCCCccCChhhhcccccccccccccccCCCCCC-CCCCCCcceEeecccccCC-CCCccccCCCccceeeeccc
Q 003385 420 VIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTG-PLPSSLMNLPNLRELYVQNN 497 (824)
Q Consensus 420 ~L~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~g-~lP~~l~~l~~L~~L~l~~N 497 (824)
+|+|++|+|++..|..|.+|++|+.|+|++|+|+++++. |++|++|+.|+|++|+|++ .+|..++.|++|+.|+|++|
T Consensus 104 ~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N 183 (635)
T 4g8a_A 104 TLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSN 183 (635)
T ss_dssp EEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSS
T ss_pred EEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCc
Confidence 999999999965567899999999999999999999886 9999999999999999985 47889999999999999999
Q ss_pred cccccccccc
Q 003385 498 MLSGTVPSSL 507 (824)
Q Consensus 498 ~l~g~ip~~l 507 (824)
++++..|..+
T Consensus 184 ~l~~~~~~~l 193 (635)
T 4g8a_A 184 KIQSIYCTDL 193 (635)
T ss_dssp CCCEECGGGG
T ss_pred cccccccccc
Confidence 9995444443
No 305
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.44 E-value=8.7e-14 Score=151.68 Aligned_cols=172 Identities=16% Similarity=0.174 Sum_probs=130.2
Q ss_pred cceeeecccccCCCCCCcc-cchhhhceeccCCCCCCcH--HHHHHHHHhcCCCCcccCCCCCCCCCCCCeeEcCCCCCC
Q 003385 340 PFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDG--VAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQP 416 (824)
Q Consensus 340 ~~l~~L~L~~n~~s~LPP~-i~~le~l~~L~l~~n~~~~--~~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~c~~~~~~ 416 (824)
++|++|+|+.|.++.+|+. +..++.|+.|+++.|.+.. .....+..+ .+.....+.+. ...++. .-.+
T Consensus 123 ~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~------l~~l~~--~~~~ 193 (332)
T 2ft3_A 123 SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAK------LTGIPK--DLPE 193 (332)
T ss_dssp TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSB------CSSCCS--SSCS
T ss_pred ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCC------CCccCc--cccC
Confidence 5788999999999999986 8999999999999998753 111111111 22222111100 111111 1125
Q ss_pred ceeEEEecCCCCCccCChhhhcccccccccccccccCCCCCC-CCCCCCcceEeecccccCCCCCccccCCCccceeeec
Q 003385 417 SITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQ 495 (824)
Q Consensus 417 ~L~~L~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~L~~L~l~ 495 (824)
+|++|+|++|++++..|..|.++++|+.|+|++|++++.++. +..+++|+.|+|++|+|+ .+|..++.+++|+.|+++
T Consensus 194 ~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~ 272 (332)
T 2ft3_A 194 TLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLH 272 (332)
T ss_dssp SCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECC
T ss_pred CCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECC
Confidence 899999999999977778999999999999999999999885 899999999999999999 899999999999999999
Q ss_pred ccccccccccccccc---------ceeccccCCccc
Q 003385 496 NNMLSGTVPSSLLSK---------NVVLNYAGNINL 522 (824)
Q Consensus 496 ~N~l~g~ip~~l~~~---------~~~l~~~~n~~l 522 (824)
+|+++ .+|...+.. ...+.+.+|+..
T Consensus 273 ~N~l~-~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~ 307 (332)
T 2ft3_A 273 TNNIT-KVGVNDFCPVGFGVKRAYYNGISLFNNPVP 307 (332)
T ss_dssp SSCCC-BCCTTSSSCSSCCSSSCCBSEEECCSSSSC
T ss_pred CCCCC-ccChhHccccccccccccccceEeecCccc
Confidence 99999 666654432 245677888755
No 306
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.43 E-value=1.7e-13 Score=152.82 Aligned_cols=157 Identities=18% Similarity=0.218 Sum_probs=132.0
Q ss_pred ceeccccceeeecccccCCCCCCcc-cchhhhceeccCCCCCCcHHHHHHHHHhcCCCCcccCCCCCCCCCCCCeeEcCC
Q 003385 334 YTNLSLPFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNS 412 (824)
Q Consensus 334 ~t~~~l~~l~~L~L~~n~~s~LPP~-i~~le~l~~L~l~~n~~~~~~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~c~~ 412 (824)
...+.+++++.|++.+|.++.+|+. +..++.|+.|+++.|.+... .+- ..
T Consensus 39 ~~~~~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~-------------------~~~----------~~ 89 (390)
T 3o6n_A 39 FEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEI-------------------DTY----------AF 89 (390)
T ss_dssp CSSGGGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEE-------------------CTT----------TT
T ss_pred ccccccCCceEEEecCCchhhCChhHhcccccCcEEECCCCccccc-------------------Chh----------hc
Confidence 3467788999999999999999998 68999999999999876631 000 11
Q ss_pred CCCCceeEEEecCCCCCccCChhhhcccccccccccccccCCCCCC-CCCCCCcceEeecccccCCCCCccccCCCccce
Q 003385 413 DPQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRE 491 (824)
Q Consensus 413 ~~~~~L~~L~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~L~~ 491 (824)
..+++|++|+|++|++++..|..|+++++|+.|+|++|+++.+++. |.++++|+.|+|++|++++..|..++++++|+.
T Consensus 90 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 169 (390)
T 3o6n_A 90 AYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQN 169 (390)
T ss_dssp TTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCE
T ss_pred cCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCE
Confidence 3467899999999999977788899999999999999999988887 688999999999999999877888999999999
Q ss_pred eeeccccccccccccccccceeccccCCc
Q 003385 492 LYVQNNMLSGTVPSSLLSKNVVLNYAGNI 520 (824)
Q Consensus 492 L~l~~N~l~g~ip~~l~~~~~~l~~~~n~ 520 (824)
|++++|+++ .++...+..+..+.+++|.
T Consensus 170 L~l~~n~l~-~~~~~~l~~L~~L~l~~n~ 197 (390)
T 3o6n_A 170 LQLSSNRLT-HVDLSLIPSLFHANVSYNL 197 (390)
T ss_dssp EECCSSCCS-BCCGGGCTTCSEEECCSSC
T ss_pred EECCCCcCC-ccccccccccceeeccccc
Confidence 999999999 6676667777777776663
No 307
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.43 E-value=4.2e-13 Score=132.41 Aligned_cols=131 Identities=18% Similarity=0.199 Sum_probs=101.6
Q ss_pred eeecccccCCCCCCcccchhhhceeccCCCCCCcHHHHHHHHHhcCCCCcccCCCCCCCCCCCCeeEcCCCCCCceeEEE
Q 003385 343 LSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSITVIH 422 (824)
Q Consensus 343 ~~L~L~~n~~s~LPP~i~~le~l~~L~l~~n~~~~~~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~c~~~~~~~L~~L~ 422 (824)
+.+++..|.++.+|..+. +.++.|+++.|.+.. ..+. ....+++|++|+
T Consensus 10 ~~l~~~~~~l~~~p~~~~--~~l~~L~l~~n~l~~-------------------~~~~----------~~~~l~~L~~L~ 58 (177)
T 2o6r_A 10 TEIRCNSKGLTSVPTGIP--SSATRLELESNKLQS-------------------LPHG----------VFDKLTQLTKLS 58 (177)
T ss_dssp TEEECCSSCCSSCCTTCC--TTCSEEECCSSCCCC-------------------CCTT----------TTTTCTTCSEEE
T ss_pred CEEEecCCCCccCCCCCC--CCCcEEEeCCCcccE-------------------eCHH----------HhcCcccccEEE
Confidence 456778888999987654 678888888886653 0000 012456899999
Q ss_pred ecCCCCCccCChhhhcccccccccccccccCCCCCC-CCCCCCcceEeecccccCCCCCccccCCCccceeeeccccccc
Q 003385 423 LSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNMLSG 501 (824)
Q Consensus 423 L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~L~~L~l~~N~l~g 501 (824)
|++|+|++..+..+.++++|+.|+|++|+|++.++. +.++++|+.|+|++|+|++..+..+..+++|+.|+|++|++.+
T Consensus 59 l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 138 (177)
T 2o6r_A 59 LSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 138 (177)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred CCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeec
Confidence 999999855556678899999999999999988886 6889999999999999985555567889999999999999987
Q ss_pred ccc
Q 003385 502 TVP 504 (824)
Q Consensus 502 ~ip 504 (824)
..|
T Consensus 139 ~~~ 141 (177)
T 2o6r_A 139 SCP 141 (177)
T ss_dssp CHH
T ss_pred cCc
Confidence 665
No 308
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.43 E-value=2.8e-14 Score=167.06 Aligned_cols=175 Identities=21% Similarity=0.197 Sum_probs=100.0
Q ss_pred cccceeeecccccCCCCCCcccchhhhceeccCCCCC-------------Cc---HHHHHHHHHhcCCCCcccCCCCCC-
Q 003385 338 SLPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGS-------------ID---GVAIVSVISLYSSADWAQEGGDPC- 400 (824)
Q Consensus 338 ~l~~l~~L~L~~n~~s~LPP~i~~le~l~~L~l~~n~-------------~~---~~~l~~lk~~~~~~~w~~~~~dpc- 400 (824)
.++.|+.|+|+.|.++.||+.|+.++.|+.|++++|. .. ...+..+.++..+.... .+..-
T Consensus 347 ~~~~L~~L~Ls~n~L~~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~--~n~~~~ 424 (567)
T 1dce_A 347 TDEQLFRCELSVEKSTVLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMR--AAYLDD 424 (567)
T ss_dssp TTTTSSSCCCCHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGG--HHHHHH
T ss_pred cCccceeccCChhhHHhhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchh--hcccch
Confidence 4667889999999999999999999999999997663 11 11222232221111000 00000
Q ss_pred CCC---CCCeeEcCCCCCCceeEEEecCCCCCccCChhhhcccccccccccccccCCCCCCCCCCCCcceEeecccccCC
Q 003385 401 LPV---PWSWLQCNSDPQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTG 477 (824)
Q Consensus 401 ~~~---~~~~~~c~~~~~~~L~~L~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~g 477 (824)
.+. ....+.. -....|+.|+|++|+|+ .+|. |++|++|+.|+|++|+|+.+|+.+++|++|+.|+|++|+|++
T Consensus 425 L~~l~l~~n~i~~--l~~~~L~~L~Ls~n~l~-~lp~-~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~Ls~N~l~~ 500 (567)
T 1dce_A 425 LRSKFLLENSVLK--MEYADVRVLHLAHKDLT-VLCH-LEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALEN 500 (567)
T ss_dssp HHHHHHHHHHHHH--HHHTTCSEEECTTSCCS-SCCC-GGGGTTCCEEECCSSCCCCCCGGGGGCTTCCEEECCSSCCCC
T ss_pred hhhhhhhcccccc--cCccCceEEEecCCCCC-CCcC-ccccccCcEeecCcccccccchhhhcCCCCCEEECCCCCCCC
Confidence 000 0000000 00124666667777666 3565 666666777777777666554456666667777777776663
Q ss_pred CCCccccCCCccceeeeccccccccc-ccccc--ccceeccccCCc
Q 003385 478 PLPSSLMNLPNLRELYVQNNMLSGTV-PSSLL--SKNVVLNYAGNI 520 (824)
Q Consensus 478 ~lP~~l~~l~~L~~L~l~~N~l~g~i-p~~l~--~~~~~l~~~~n~ 520 (824)
+| .+++|++|+.|+|++|+|++.. |..+. ..+..+.+++|+
T Consensus 501 -lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~ 544 (567)
T 1dce_A 501 -VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNS 544 (567)
T ss_dssp -CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSG
T ss_pred -Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCc
Confidence 55 6666666777777777666443 55543 233555556664
No 309
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.43 E-value=1.7e-13 Score=161.83 Aligned_cols=155 Identities=19% Similarity=0.204 Sum_probs=125.1
Q ss_pred eeccccceeeecccccCCCCCCcc-cchhhhceeccCCCCCCcHHHHHHHHHhcCCCCcccCCCCCCCCCCCCeeEcCCC
Q 003385 335 TNLSLPFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSD 413 (824)
Q Consensus 335 t~~~l~~l~~L~L~~n~~s~LPP~-i~~le~l~~L~l~~n~~~~~~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~c~~~ 413 (824)
..+.+++++.|++..|.++.+|+. +..++.|+.|+++.|.+... .|- ...
T Consensus 46 ~~l~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~-------------------~~~----------~~~ 96 (597)
T 3oja_B 46 EDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEI-------------------DTY----------AFA 96 (597)
T ss_dssp SSGGGCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEE-------------------CTT----------TTT
T ss_pred ccccCCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCC-------------------ChH----------Hhc
Confidence 466788889999999999999998 68899999999998876630 100 113
Q ss_pred CCCceeEEEecCCCCCccCChhhhcccccccccccccccCCCCCC-CCCCCCcceEeecccccCCCCCccccCCCcccee
Q 003385 414 PQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLREL 492 (824)
Q Consensus 414 ~~~~L~~L~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~L~~L 492 (824)
.+++|+.|+|++|.|++..|..|++|++|+.|+|++|+|+++++. |.++++|+.|+|++|+|++..|..|+++++|+.|
T Consensus 97 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 176 (597)
T 3oja_B 97 YAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNL 176 (597)
T ss_dssp TCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEE
T ss_pred CCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEE
Confidence 456899999999999977777888999999999999999988887 6889999999999999998888889999999999
Q ss_pred eeccccccccccccccccceeccccCC
Q 003385 493 YVQNNMLSGTVPSSLLSKNVVLNYAGN 519 (824)
Q Consensus 493 ~l~~N~l~g~ip~~l~~~~~~l~~~~n 519 (824)
+|++|.++ .+|...+..+..+.+++|
T Consensus 177 ~L~~N~l~-~~~~~~l~~L~~L~l~~n 202 (597)
T 3oja_B 177 QLSSNRLT-HVDLSLIPSLFHANVSYN 202 (597)
T ss_dssp ECTTSCCS-BCCGGGCTTCSEEECCSS
T ss_pred ECcCCCCC-CcChhhhhhhhhhhcccC
Confidence 99999998 566666666666666655
No 310
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.42 E-value=7.6e-14 Score=133.64 Aligned_cols=127 Identities=17% Similarity=0.184 Sum_probs=109.5
Q ss_pred ccceeeecccccCCC--CCCcccchhhhceeccCCCCCCcHHHHHHHHHhcCCCCcccCCCCCCCCCCCCeeEcCCCCCC
Q 003385 339 LPFVLSFKFGKTYDS--SRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQP 416 (824)
Q Consensus 339 l~~l~~L~L~~n~~s--~LPP~i~~le~l~~L~l~~n~~~~~~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~c~~~~~~ 416 (824)
.++|+.|+|+.|.++ .+|+.+..++.|+.|+++.|.+... .....++
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~-------------------------------~~~~~l~ 64 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI-------------------------------ANLPKLN 64 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC-------------------------------TTCCCCT
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc-------------------------------hhhhcCC
Confidence 467899999999999 8999999999999999999977630 0113457
Q ss_pred ceeEEEecCCCCCccCChhhhcccccccccccccccCCCC--CCCCCCCCcceEeecccccCCCCC---ccccCCCccce
Q 003385 417 SITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPI--PDFSGCPDLRIIHLEDNQLTGPLP---SSLMNLPNLRE 491 (824)
Q Consensus 417 ~L~~L~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~--p~~~~l~~L~~L~L~~N~l~g~lP---~~l~~l~~L~~ 491 (824)
+|+.|+|++|++++.+|..+.++++|+.|+|++|++++.+ +.+.++++|+.|+|++|++++..+ ..++.+++|+.
T Consensus 65 ~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~ 144 (149)
T 2je0_A 65 KLKKLELSDNRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTY 144 (149)
T ss_dssp TCCEEECCSSCCCSCTHHHHHHCTTCCEEECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCE
T ss_pred CCCEEECCCCcccchHHHHhhhCCCCCEEECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCccc
Confidence 8999999999999779998999999999999999999964 568999999999999999996555 58999999999
Q ss_pred eeecc
Q 003385 492 LYVQN 496 (824)
Q Consensus 492 L~l~~ 496 (824)
|++++
T Consensus 145 L~l~d 149 (149)
T 2je0_A 145 LDGYD 149 (149)
T ss_dssp ETTBC
T ss_pred ccCCC
Confidence 99864
No 311
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.42 E-value=1.6e-13 Score=163.26 Aligned_cols=175 Identities=13% Similarity=0.100 Sum_probs=133.1
Q ss_pred cccceeeecccccCCC-CCCcccchhhhceeccCCCCC-CcH-HHHHHHHHh------cCCCCcccCCCCCCCCCCCCee
Q 003385 338 SLPFVLSFKFGKTYDS-SRGPLLNAMEINKYLERNDGS-IDG-VAIVSVISL------YSSADWAQEGGDPCLPVPWSWL 408 (824)
Q Consensus 338 ~l~~l~~L~L~~n~~s-~LPP~i~~le~l~~L~l~~n~-~~~-~~l~~lk~~------~~~~~w~~~~~dpc~~~~~~~~ 408 (824)
.+++|++|+|+.|.++ .+|+.|..++.|+.|+++.|+ +.. .....+..+ ..+..+....+. ...+
T Consensus 247 ~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~------l~~i 320 (636)
T 4eco_A 247 NLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNN------LKTF 320 (636)
T ss_dssp GCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSC------CSSC
T ss_pred ccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCc------CCcc
Confidence 4788999999999855 577789999999999999998 876 555556554 445554332211 1112
Q ss_pred Ec--CCCCCCceeEEEecCCCCCccCChhhhcccccccccccccccCCCCCCCCCCCC-cceEeecccccCCCCCccccC
Q 003385 409 QC--NSDPQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPD-LRIIHLEDNQLTGPLPSSLMN 485 (824)
Q Consensus 409 ~c--~~~~~~~L~~L~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~p~~~~l~~-L~~L~L~~N~l~g~lP~~l~~ 485 (824)
+- ....+++|+.|+|++|+++|.+| .|+++++|+.|+|++|+++.+++.+.++++ |+.|+|++|+|+ .+|..++.
T Consensus 321 p~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~ 398 (636)
T 4eco_A 321 PVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQITEIPANFCGFTEQVENLSFAHNKLK-YIPNIFDA 398 (636)
T ss_dssp CCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEEECCTTSEEECTTCCEEECCSSCCS-SCCSCCCT
T ss_pred CchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccccccHhhhhhcccCcEEEccCCcCc-ccchhhhh
Confidence 21 22456789999999999998999 899999999999999999966667888888 999999999998 88888877
Q ss_pred CC--ccceeeecccccccccccccc-------c--cceeccccCCc
Q 003385 486 LP--NLRELYVQNNMLSGTVPSSLL-------S--KNVVLNYAGNI 520 (824)
Q Consensus 486 l~--~L~~L~l~~N~l~g~ip~~l~-------~--~~~~l~~~~n~ 520 (824)
++ +|+.|++++|+++|.+|..+. . .+..+.+++|.
T Consensus 399 ~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~ 444 (636)
T 4eco_A 399 KSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQ 444 (636)
T ss_dssp TCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSC
T ss_pred cccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCc
Confidence 65 899999999999988877665 2 33556666663
No 312
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.42 E-value=6.7e-14 Score=165.17 Aligned_cols=181 Identities=17% Similarity=0.096 Sum_probs=114.7
Q ss_pred ccceeeecccccCCCCCCcc-cchhhhceeccCCCCCCcHHHHH-HHHHhcCCCCcccCCCCCCCCCCCCee-EcCCCCC
Q 003385 339 LPFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVAIV-SVISLYSSADWAQEGGDPCLPVPWSWL-QCNSDPQ 415 (824)
Q Consensus 339 l~~l~~L~L~~n~~s~LPP~-i~~le~l~~L~l~~n~~~~~~l~-~lk~~~~~~~w~~~~~dpc~~~~~~~~-~c~~~~~ 415 (824)
+++|+.|+|+.|.++.++|. +..++.|+.|+++.|.+...... .+..+..+..+..+++. .... ......+
T Consensus 375 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~------l~~~~~~~~~~l 448 (606)
T 3t6q_A 375 LSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSL------LDISSEQLFDGL 448 (606)
T ss_dssp CTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCC------CBTTCTTTTTTC
T ss_pred CCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCc------cCCcCHHHHhCC
Confidence 44556666666666655443 55666666666666554421110 01111122222111000 0000 0012346
Q ss_pred CceeEEEecCCCCCcc---CChhhhcccccccccccccccCCCCCC-CCCCCCcceEeecccccCCCCCccccCCCccce
Q 003385 416 PSITVIHLSSKNLTGN---IPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRE 491 (824)
Q Consensus 416 ~~L~~L~L~~n~l~g~---lp~~i~~L~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~L~~ 491 (824)
++|++|+|++|++++. .+..+..+++|+.|+|++|++++.+|. |.++++|+.|+|++|+|++..|+.++++++| .
T Consensus 449 ~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~ 527 (606)
T 3t6q_A 449 PALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-Y 527 (606)
T ss_dssp TTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-E
T ss_pred CCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-E
Confidence 7888888888888762 335688888888888888888888765 7888888888888888888888888888888 8
Q ss_pred eeeccccccccccccc--cccceeccccCCccccCCC
Q 003385 492 LYVQNNMLSGTVPSSL--LSKNVVLNYAGNINLHEGG 526 (824)
Q Consensus 492 L~l~~N~l~g~ip~~l--~~~~~~l~~~~n~~lc~~~ 526 (824)
|+|++|++++..|..+ +..+..+.+++|+..|.+.
T Consensus 528 L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 564 (606)
T 3t6q_A 528 LNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCS 564 (606)
T ss_dssp EECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGG
T ss_pred EECcCCcccccCHhhcccCCCCCEEeCCCCCccccCC
Confidence 8888888885444433 2344677888999888664
No 313
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.42 E-value=2.7e-13 Score=149.83 Aligned_cols=147 Identities=19% Similarity=0.252 Sum_probs=123.1
Q ss_pred eeecccccCCCCCCcccchhhhceeccCCCCCCcHHHHHHHHHhcCCCCcccCCCCCCCCCCCCeeEcCCCCCCceeEEE
Q 003385 343 LSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSITVIH 422 (824)
Q Consensus 343 ~~L~L~~n~~s~LPP~i~~le~l~~L~l~~n~~~~~~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~c~~~~~~~L~~L~ 422 (824)
..++++.+.++.+|..+.. .++.|+|+.|.+... ...+ . ...+++|+.|+
T Consensus 21 ~~l~c~~~~l~~iP~~~~~--~l~~L~Ls~N~l~~l----------~~~~---------------~---~~~l~~L~~L~ 70 (361)
T 2xot_A 21 NILSCSKQQLPNVPQSLPS--YTALLDLSHNNLSRL----------RAEW---------------T---PTRLTNLHSLL 70 (361)
T ss_dssp TEEECCSSCCSSCCSSCCT--TCSEEECCSSCCCEE----------CTTS---------------S---SSCCTTCCEEE
T ss_pred CEEEeCCCCcCccCccCCC--CCCEEECCCCCCCcc----------Chhh---------------h---hhcccccCEEE
Confidence 4678899999999987754 588999999987640 0011 0 01467999999
Q ss_pred ecCCCCCccCChhhhcccccccccccccccCCCCCC-CCCCCCcceEeecccccCCCCCccccCCCccceeeeccccccc
Q 003385 423 LSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNMLSG 501 (824)
Q Consensus 423 L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~L~~L~l~~N~l~g 501 (824)
|++|+|++..|..|.+|++|+.|+|++|+|+++++. |.++++|+.|+|++|+|++..|..|.+|++|+.|+|++|+|+
T Consensus 71 L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~- 149 (361)
T 2xot_A 71 LSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQIS- 149 (361)
T ss_dssp CCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC-
T ss_pred CCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCC-
Confidence 999999977778899999999999999999999886 899999999999999999878899999999999999999999
Q ss_pred ccccccc------ccceeccccCCc
Q 003385 502 TVPSSLL------SKNVVLNYAGNI 520 (824)
Q Consensus 502 ~ip~~l~------~~~~~l~~~~n~ 520 (824)
.+|..++ ..+..+.+++|.
T Consensus 150 ~l~~~~~~~~~~l~~L~~L~L~~N~ 174 (361)
T 2xot_A 150 RFPVELIKDGNKLPKLMLLDLSSNK 174 (361)
T ss_dssp SCCGGGTC----CTTCCEEECCSSC
T ss_pred eeCHHHhcCcccCCcCCEEECCCCC
Confidence 7888775 344667777774
No 314
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.41 E-value=1.1e-13 Score=157.80 Aligned_cols=176 Identities=18% Similarity=0.143 Sum_probs=128.7
Q ss_pred cccceeeecccccCCCCCCcc-cchhhhceeccCCCCCCcHHHHHHHHHhcCCCCcccCCCCCCCCCCCCeeEc-CCCCC
Q 003385 338 SLPFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQC-NSDPQ 415 (824)
Q Consensus 338 ~l~~l~~L~L~~n~~s~LPP~-i~~le~l~~L~l~~n~~~~~~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~c-~~~~~ 415 (824)
.+++|+.|+|+.|.++.++|. +.++..|+.|+++.|.+.......+..+..+..+..+++. ...+.. ....+
T Consensus 97 ~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~------l~~~~~~~~~~l 170 (452)
T 3zyi_A 97 HLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNP------IESIPSYAFNRV 170 (452)
T ss_dssp TCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEECCSCC------CCEECTTTTTTC
T ss_pred CCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEECCCCC------cceeCHhHHhcC
Confidence 467899999999999999876 8999999999999998775333323333333333222111 122221 23457
Q ss_pred CceeEEEecCCCCCccCCh-hhhcccccccccccccccCCCCCCCCCCCCcceEeecccccCCCCCccccCCCccceeee
Q 003385 416 PSITVIHLSSKNLTGNIPS-DLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYV 494 (824)
Q Consensus 416 ~~L~~L~L~~n~l~g~lp~-~i~~L~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~L~~L~l 494 (824)
++|+.|+|++|+..+.+|. .|.+|++|+.|+|++|+|++. |.+..+++|+.|+|++|+|++..|..|.++++|+.|+|
T Consensus 171 ~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 249 (452)
T 3zyi_A 171 PSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-PNLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWV 249 (452)
T ss_dssp TTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-CCCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEEC
T ss_pred CcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-ccccccccccEEECcCCcCcccCcccccCccCCCEEEe
Confidence 8899999998443335554 688999999999999999876 67889999999999999999888899999999999999
Q ss_pred cccccccccccccc--ccceeccccCCc
Q 003385 495 QNNMLSGTVPSSLL--SKNVVLNYAGNI 520 (824)
Q Consensus 495 ~~N~l~g~ip~~l~--~~~~~l~~~~n~ 520 (824)
++|++++..|..+. ..+..+.+++|.
T Consensus 250 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~ 277 (452)
T 3zyi_A 250 MNSQVSLIERNAFDGLASLVELNLAHNN 277 (452)
T ss_dssp TTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred CCCcCceECHHHhcCCCCCCEEECCCCc
Confidence 99999944444432 344667777774
No 315
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.41 E-value=1.6e-13 Score=160.34 Aligned_cols=113 Identities=21% Similarity=0.232 Sum_probs=97.8
Q ss_pred CCCCceeEEEecCCCCCccCChhhhcccccccccccccccC-CCCC-CCCCCCCcceEeecccccCCCCCccccCCCccc
Q 003385 413 DPQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLT-GPIP-DFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLR 490 (824)
Q Consensus 413 ~~~~~L~~L~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~-~~~p-~~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~L~ 490 (824)
..+++|+.|+|++|++++..|..+.++++|+.|+|++|+++ +.+| .+..+++|+.|+|++|++++..|..++++++|+
T Consensus 418 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 497 (570)
T 2z63_A 418 LSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQ 497 (570)
T ss_dssp TTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCC
T ss_pred hcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCC
Confidence 35679999999999999889999999999999999999998 4455 589999999999999999988899999999999
Q ss_pred eeeecccccccccccccc---ccceeccccCCccccCCC
Q 003385 491 ELYVQNNMLSGTVPSSLL---SKNVVLNYAGNINLHEGG 526 (824)
Q Consensus 491 ~L~l~~N~l~g~ip~~l~---~~~~~l~~~~n~~lc~~~ 526 (824)
.|+|++|++++ +|+..+ ..+..+.+.+|+..|.++
T Consensus 498 ~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~N~~~~~~~ 535 (570)
T 2z63_A 498 VLNMASNQLKS-VPDGIFDRLTSLQKIWLHTNPWDCSCP 535 (570)
T ss_dssp EEECCSSCCSC-CCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred EEeCCCCcCCC-CCHHHhhcccCCcEEEecCCcccCCCc
Confidence 99999999995 554443 344678889999888765
No 316
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.40 E-value=3.5e-13 Score=144.40 Aligned_cols=143 Identities=24% Similarity=0.342 Sum_probs=98.6
Q ss_pred ccceeeecccccCCCCCCcccchhhhceeccCCCCCCcHHHHHHHHHhcCCCCcccCCCCCCCCCCCCeeEcCCCCCCce
Q 003385 339 LPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 418 (824)
Q Consensus 339 l~~l~~L~L~~n~~s~LPP~i~~le~l~~L~l~~n~~~~~~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~c~~~~~~~L 418 (824)
+++|+.|+|+.|.++.++| +..++.|+.|+++.|.+... ..+ ..+++|
T Consensus 67 l~~L~~L~L~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~~--~~l-----------------------------~~l~~L 114 (291)
T 1h6t_A 67 LPNVTKLFLNGNKLTDIKP-LANLKNLGWLFLDENKVKDL--SSL-----------------------------KDLKKL 114 (291)
T ss_dssp CTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCCG--GGG-----------------------------TTCTTC
T ss_pred CCCCCEEEccCCccCCCcc-cccCCCCCEEECCCCcCCCC--hhh-----------------------------ccCCCC
Confidence 6788899999999999988 89999999999998876641 001 234567
Q ss_pred eEEEecCCCCCccCChhhhcccccccccccccccCCCCCCCCCCCCcceEeecccccCCCCCccccCCCccceeeecccc
Q 003385 419 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNM 498 (824)
Q Consensus 419 ~~L~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~L~~L~l~~N~ 498 (824)
+.|+|++|++++ + +.+..|++|+.|+|++|++++. +.+..+++|+.|+|++|+|++. +. ++.+++|+.|+|++|+
T Consensus 115 ~~L~L~~n~i~~-~-~~l~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~L~~N~l~~~-~~-l~~l~~L~~L~L~~N~ 189 (291)
T 1h6t_A 115 KSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI-TVLSRLTKLDTLSLEDNQISDI-VP-LAGLTKLQNLYLSKNH 189 (291)
T ss_dssp CEEECTTSCCCC-C-GGGGGCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCCC-GG-GTTCTTCCEEECCSSC
T ss_pred CEEECCCCcCCC-C-hhhcCCCCCCEEEccCCcCCcc-hhhccCCCCCEEEccCCccccc-hh-hcCCCccCEEECCCCc
Confidence 777777777773 3 3577777777777777777765 5567777777777777777743 33 7777777777777777
Q ss_pred ccccccccc--cccceeccccCCc
Q 003385 499 LSGTVPSSL--LSKNVVLNYAGNI 520 (824)
Q Consensus 499 l~g~ip~~l--~~~~~~l~~~~n~ 520 (824)
++ .+|. + +..+..+.+.+|+
T Consensus 190 i~-~l~~-l~~l~~L~~L~l~~n~ 211 (291)
T 1h6t_A 190 IS-DLRA-LAGLKNLDVLELFSQE 211 (291)
T ss_dssp CC-BCGG-GTTCTTCSEEEEEEEE
T ss_pred CC-CChh-hccCCCCCEEECcCCc
Confidence 77 4543 2 2233445555554
No 317
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.40 E-value=4.8e-13 Score=134.19 Aligned_cols=111 Identities=25% Similarity=0.314 Sum_probs=97.2
Q ss_pred CceeEEEecCCCCCccCCh-hhhcccccccccccccccCCCCCC-CCCCCCcceEeecccccCCCCCccccCCCccceee
Q 003385 416 PSITVIHLSSKNLTGNIPS-DLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELY 493 (824)
Q Consensus 416 ~~L~~L~L~~n~l~g~lp~-~i~~L~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~L~~L~ 493 (824)
.+|++|+|++|+|++..+. .|++|++|+.|+|++|+|++.+|. |.++++|+.|+|++|+|++..|..|+++++|+.|+
T Consensus 29 ~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 108 (192)
T 1w8a_A 29 LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLN 108 (192)
T ss_dssp TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEE
T ss_pred CCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEE
Confidence 4899999999999955554 499999999999999999999875 99999999999999999988888899999999999
Q ss_pred ecccccccccccccc--ccceeccccCCccccCCC
Q 003385 494 VQNNMLSGTVPSSLL--SKNVVLNYAGNINLHEGG 526 (824)
Q Consensus 494 l~~N~l~g~ip~~l~--~~~~~l~~~~n~~lc~~~ 526 (824)
|++|++++.+|..+. ..+..+.+.+|+..|..+
T Consensus 109 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 109 LYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 999999976676653 345778889999888653
No 318
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.40 E-value=4.3e-14 Score=152.95 Aligned_cols=103 Identities=22% Similarity=0.185 Sum_probs=82.8
Q ss_pred CCCceeEEEecCCCCCc--cCC-hhhhcccccccccccccccCCCCC--CCCCCCCcceEeecccccCCCCCccccCCCc
Q 003385 414 PQPSITVIHLSSKNLTG--NIP-SDLTKLSSLVELWLDGNSLTGPIP--DFSGCPDLRIIHLEDNQLTGPLPSSLMNLPN 488 (824)
Q Consensus 414 ~~~~L~~L~L~~n~l~g--~lp-~~i~~L~~L~~L~L~~N~l~~~~p--~~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~ 488 (824)
.+++|++|+|++|+|++ .++ ..+.++++|+.|+|++|+|++.+| .+..+++|+.|+|++|+|+ .+|..+. ++
T Consensus 199 ~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~--~~ 275 (312)
T 1wwl_A 199 KFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP--AK 275 (312)
T ss_dssp SCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC--SE
T ss_pred cCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc--CC
Confidence 46789999999999983 233 344678999999999999999875 4777999999999999999 8998887 89
Q ss_pred cceeeecccccccccccccc--ccceeccccCCcc
Q 003385 489 LRELYVQNNMLSGTVPSSLL--SKNVVLNYAGNIN 521 (824)
Q Consensus 489 L~~L~l~~N~l~g~ip~~l~--~~~~~l~~~~n~~ 521 (824)
|+.|+|++|+|+ .+|. +. ..+..+.+++|+.
T Consensus 276 L~~L~Ls~N~l~-~~p~-~~~l~~L~~L~L~~N~l 308 (312)
T 1wwl_A 276 LSVLDLSYNRLD-RNPS-PDELPQVGNLSLKGNPF 308 (312)
T ss_dssp EEEEECCSSCCC-SCCC-TTTSCEEEEEECTTCTT
T ss_pred ceEEECCCCCCC-CChh-HhhCCCCCEEeccCCCC
Confidence 999999999999 4565 32 2335677788864
No 319
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.40 E-value=9.7e-14 Score=149.93 Aligned_cols=176 Identities=16% Similarity=0.088 Sum_probs=122.9
Q ss_pred cccceeeecccccCCCCCCcc-c--chhhhceeccCCCCCCcHH----HHHHHHHhcCCCCcccCCCCCCCCCCCCeeEc
Q 003385 338 SLPFVLSFKFGKTYDSSRGPL-L--NAMEINKYLERNDGSIDGV----AIVSVISLYSSADWAQEGGDPCLPVPWSWLQC 410 (824)
Q Consensus 338 ~l~~l~~L~L~~n~~s~LPP~-i--~~le~l~~L~l~~n~~~~~----~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~c 410 (824)
.++.|+.|+|++|.++..+|. + ..+..|+.|+++.|.+... ....+..+..++.+..+++. ...+.+
T Consensus 89 ~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~------l~~~~~ 162 (310)
T 4glp_A 89 AYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAH------SPAFSC 162 (310)
T ss_dssp HHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCS------SCCCCT
T ss_pred ccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCC------cchhhH
Confidence 345688999999998866555 5 8899999999998887641 11122222233333222111 112222
Q ss_pred -CCCCCCceeEEEecCCCCCcc--CC--hhhhcccccccccccccccCCCCCC----CCCCCCcceEeecccccCCCCCc
Q 003385 411 -NSDPQPSITVIHLSSKNLTGN--IP--SDLTKLSSLVELWLDGNSLTGPIPD----FSGCPDLRIIHLEDNQLTGPLPS 481 (824)
Q Consensus 411 -~~~~~~~L~~L~L~~n~l~g~--lp--~~i~~L~~L~~L~L~~N~l~~~~p~----~~~l~~L~~L~L~~N~l~g~lP~ 481 (824)
....+++|++|+|++|++.+. ++ ..++++++|+.|+|++|+|+..++. +.++++|+.|+|++|+|++..|+
T Consensus 163 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~ 242 (310)
T 4glp_A 163 EQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRATVNP 242 (310)
T ss_dssp TSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHTCCCSSEECTTSCCCCCCCS
T ss_pred HHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcCCCCCEEECCCCCCCccchh
Confidence 123567899999999988753 32 2347888899999999988765442 46788999999999999977788
Q ss_pred cccCC---CccceeeeccccccccccccccccceeccccCCc
Q 003385 482 SLMNL---PNLRELYVQNNMLSGTVPSSLLSKNVVLNYAGNI 520 (824)
Q Consensus 482 ~l~~l---~~L~~L~l~~N~l~g~ip~~l~~~~~~l~~~~n~ 520 (824)
.++.+ ++|+.|+|++|+|+ .+|..+...+..+.+++|.
T Consensus 243 ~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~~~L~~L~Ls~N~ 283 (310)
T 4glp_A 243 SAPRCMWSSALNSLNLSFAGLE-QVPKGLPAKLRVLDLSSNR 283 (310)
T ss_dssp CCSSCCCCTTCCCEECCSSCCC-SCCSCCCSCCSCEECCSCC
T ss_pred hHHhccCcCcCCEEECCCCCCC-chhhhhcCCCCEEECCCCc
Confidence 88777 58999999999998 8888887777777777774
No 320
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.40 E-value=1.8e-13 Score=155.39 Aligned_cols=175 Identities=17% Similarity=0.168 Sum_probs=129.0
Q ss_pred cccceeeecccccCCCCCCcc-cchhhhceeccCCCCCCcHHHHHHHHHhcCCCCcccCCCCCCCCCCCCeeEc-CCCCC
Q 003385 338 SLPFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQC-NSDPQ 415 (824)
Q Consensus 338 ~l~~l~~L~L~~n~~s~LPP~-i~~le~l~~L~l~~n~~~~~~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~c-~~~~~ 415 (824)
.+++|+.|+|+.|.++.+++. +.++..|+.|+++.|.+.......+..+..++.+..+++. ...+.. ....+
T Consensus 86 ~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~------i~~~~~~~~~~l 159 (440)
T 3zyj_A 86 HLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNP------IESIPSYAFNRI 159 (440)
T ss_dssp SCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECCSCC------CCEECTTTTTTC
T ss_pred CCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeCCCCc------ccccCHHHhhhC
Confidence 467899999999999999976 8999999999999998775332233333333333222111 122221 23457
Q ss_pred CceeEEEecCCCCCccCCh-hhhcccccccccccccccCCCCCCCCCCCCcceEeecccccCCCCCccccCCCccceeee
Q 003385 416 PSITVIHLSSKNLTGNIPS-DLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYV 494 (824)
Q Consensus 416 ~~L~~L~L~~n~l~g~lp~-~i~~L~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~L~~L~l 494 (824)
++|+.|+|++|+..+.+|. .|.+|++|+.|+|++|+|+.+ |.+..+++|+.|+|++|+|++..|..|.++++|+.|+|
T Consensus 160 ~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 238 (440)
T 3zyj_A 160 PSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREI-PNLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWM 238 (440)
T ss_dssp TTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSSC-CCCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred cccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCccc-cccCCCcccCEEECCCCccCccChhhhccCccCCEEEC
Confidence 8899999998544435554 788999999999999999855 57889999999999999999888899999999999999
Q ss_pred ccccccccccccccc---cceeccccCCc
Q 003385 495 QNNMLSGTVPSSLLS---KNVVLNYAGNI 520 (824)
Q Consensus 495 ~~N~l~g~ip~~l~~---~~~~l~~~~n~ 520 (824)
++|+++ .++...+. .+..+.+++|.
T Consensus 239 ~~n~l~-~~~~~~~~~l~~L~~L~L~~N~ 266 (440)
T 3zyj_A 239 IQSQIQ-VIERNAFDNLQSLVEINLAHNN 266 (440)
T ss_dssp TTCCCC-EECTTSSTTCTTCCEEECTTSC
T ss_pred CCCcee-EEChhhhcCCCCCCEEECCCCC
Confidence 999999 55544433 34667777774
No 321
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.40 E-value=2.9e-13 Score=158.48 Aligned_cols=158 Identities=17% Similarity=0.197 Sum_probs=127.3
Q ss_pred cccceeeecccccCCCC-CCcccchhhhceeccCCCCCCcHHHHHHHHHhcCCCCcccCCCCCCCCCCCCeeEcCCCCCC
Q 003385 338 SLPFVLSFKFGKTYDSS-RGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQP 416 (824)
Q Consensus 338 ~l~~l~~L~L~~n~~s~-LPP~i~~le~l~~L~l~~n~~~~~~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~c~~~~~~ 416 (824)
.+++|+.|+|+.|.++. +|+.+..++.|+.|+++.|.+.... .+.-....++
T Consensus 351 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~---------------------------~~~~~~~~l~ 403 (562)
T 3a79_B 351 SPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFF---------------------------KVALMTKNMS 403 (562)
T ss_dssp SCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTT---------------------------HHHHTTTTCT
T ss_pred CCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcc---------------------------cchhhhcCCC
Confidence 46788999999999998 5566899999999999988776310 0000113467
Q ss_pred ceeEEEecCCCCCccCCh-hhhcccccccccccccccCCCCCC-CCCCCCcceEeecccccCCCCCccccCCCccceeee
Q 003385 417 SITVIHLSSKNLTGNIPS-DLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYV 494 (824)
Q Consensus 417 ~L~~L~L~~n~l~g~lp~-~i~~L~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~L~~L~l 494 (824)
+|+.|+|++|++++.+|. .+..+++|+.|+|++|++++.+|. +. ++|+.|+|++|+|+ .+|..+.++++|+.|+|
T Consensus 404 ~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L 480 (562)
T 3a79_B 404 SLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNV 480 (562)
T ss_dssp TCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEEC
T ss_pred CCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEEC
Confidence 899999999999976776 488899999999999999887664 33 79999999999999 89998889999999999
Q ss_pred ccccccccccccccc---cceeccccCCccccCCC
Q 003385 495 QNNMLSGTVPSSLLS---KNVVLNYAGNINLHEGG 526 (824)
Q Consensus 495 ~~N~l~g~ip~~l~~---~~~~l~~~~n~~lc~~~ 526 (824)
++|+|+ .+|...+. .+..+.+++|+..|.++
T Consensus 481 ~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~c~ 514 (562)
T 3a79_B 481 ASNQLK-SVPDGVFDRLTSLQYIWLHDNPWDCTCP 514 (562)
T ss_dssp CSSCCC-CCCTTSTTTCTTCCCEECCSCCBCCCHH
T ss_pred CCCCCC-CCCHHHHhcCCCCCEEEecCCCcCCCcc
Confidence 999999 89987443 34667889999888763
No 322
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.40 E-value=4.1e-13 Score=158.43 Aligned_cols=139 Identities=14% Similarity=0.148 Sum_probs=116.6
Q ss_pred cceeeecccccCCCCCCc-ccchhhhceeccCCCCCCcHHHHHHHHHhcCCCCcccCCCCCCCCCCCCeeEcCCCCCCce
Q 003385 340 PFVLSFKFGKTYDSSRGP-LLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 418 (824)
Q Consensus 340 ~~l~~L~L~~n~~s~LPP-~i~~le~l~~L~l~~n~~~~~~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~c~~~~~~~L 418 (824)
+.++.|+|+.|.++.+|| .+..++.|+.|+++.|.+... .|- ....+++|
T Consensus 32 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i-------------------~~~----------~~~~l~~L 82 (606)
T 3vq2_A 32 SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETI-------------------EDK----------AWHGLHHL 82 (606)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEE-------------------CTT----------TTTTCTTC
T ss_pred CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCccccc-------------------CHH----------Hhhchhhc
Confidence 578899999999999999 599999999999999876530 010 11346789
Q ss_pred eEEEecCCCCCccCChhhhcccccccccccccccCCCCC-CCCCCCCcceEeecccccCC-CCCccccCCCccceeeecc
Q 003385 419 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIP-DFSGCPDLRIIHLEDNQLTG-PLPSSLMNLPNLRELYVQN 496 (824)
Q Consensus 419 ~~L~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~N~l~g-~lP~~l~~l~~L~~L~l~~ 496 (824)
++|+|++|++++..|..|++|++|++|+|++|++++.++ .++++++|++|+|++|++++ .+|..+++|++|+.|+|++
T Consensus 83 ~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~ 162 (606)
T 3vq2_A 83 SNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSY 162 (606)
T ss_dssp CEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCS
T ss_pred CEeECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccC
Confidence 999999999997779999999999999999999999886 48999999999999999986 6799999999999999999
Q ss_pred ccccccccccc
Q 003385 497 NMLSGTVPSSL 507 (824)
Q Consensus 497 N~l~g~ip~~l 507 (824)
|++++..|..+
T Consensus 163 n~l~~~~~~~~ 173 (606)
T 3vq2_A 163 NYIQTITVNDL 173 (606)
T ss_dssp SCCCEECTTTT
T ss_pred CcceecChhhh
Confidence 99995444433
No 323
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.40 E-value=7.7e-13 Score=155.87 Aligned_cols=125 Identities=26% Similarity=0.399 Sum_probs=78.0
Q ss_pred ccceeeecccccCCCCCCcccchhhhceeccCCCCCCcHHHHHHHHHhcCCCCcccCCCCCCCCCCCCeeEcCCCCCCce
Q 003385 339 LPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 418 (824)
Q Consensus 339 l~~l~~L~L~~n~~s~LPP~i~~le~l~~L~l~~n~~~~~~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~c~~~~~~~L 418 (824)
|++|+.|+|+.|.++.+|| +..++.|+.|+|+.|.+... ..+ ..+++|
T Consensus 64 l~~L~~L~Ls~N~l~~~~~-l~~l~~L~~L~Ls~N~l~~l--~~l-----------------------------~~l~~L 111 (605)
T 1m9s_A 64 LPNVTKLFLNGNKLTDIKP-LTNLKNLGWLFLDENKIKDL--SSL-----------------------------KDLKKL 111 (605)
T ss_dssp CTTCCEEECTTSCCCCCGG-GGGCTTCCEEECCSSCCCCC--TTS-----------------------------TTCTTC
T ss_pred CCCCCEEEeeCCCCCCChh-hccCCCCCEEECcCCCCCCC--hhh-----------------------------ccCCCC
Confidence 6788889999999999888 88888899999988876531 011 223455
Q ss_pred eEEEecCCCCCccCChhhhcccccccccccccccCCCCCCCCCCCCcceEeecccccCCCCCccccCCCccceeeecccc
Q 003385 419 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNM 498 (824)
Q Consensus 419 ~~L~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~L~~L~l~~N~ 498 (824)
+.|+|++|+|++ + +.+..|++|+.|+|++|+|+++ +.+..|++|+.|+|++|+|++..| ++.|++|+.|+|++|+
T Consensus 112 ~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l-~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~ 186 (605)
T 1m9s_A 112 KSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI-TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNH 186 (605)
T ss_dssp CEEECTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC-GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSC
T ss_pred CEEEecCCCCCC-C-ccccCCCccCEEECCCCccCCc-hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCC
Confidence 555555555552 3 2355555555555555555554 445555555555555555554333 5555555555555555
Q ss_pred cc
Q 003385 499 LS 500 (824)
Q Consensus 499 l~ 500 (824)
|+
T Consensus 187 i~ 188 (605)
T 1m9s_A 187 IS 188 (605)
T ss_dssp CC
T ss_pred CC
Confidence 55
No 324
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.40 E-value=6.2e-14 Score=171.15 Aligned_cols=179 Identities=17% Similarity=0.176 Sum_probs=133.9
Q ss_pred cccceeeecccccCCCC------------------CCcccc--hhhhceeccCCCCCCcHHHHHHHHHhcCCCCcccCCC
Q 003385 338 SLPFVLSFKFGKTYDSS------------------RGPLLN--AMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGG 397 (824)
Q Consensus 338 ~l~~l~~L~L~~n~~s~------------------LPP~i~--~le~l~~L~l~~n~~~~~~l~~lk~~~~~~~w~~~~~ 397 (824)
.|++|+.|+|+.|.++. +|+.++ .++.|+.|+++.|.+.......+..+..+..+..+++
T Consensus 446 ~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N 525 (876)
T 4ecn_A 446 RLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACN 525 (876)
T ss_dssp GCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTC
T ss_pred cCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCC
Confidence 46789999999999998 999988 9999999999988755433344555555555433222
Q ss_pred C-CCC-CCC--CCeeEcCCCCCCceeEEEecCCCCCccCCh--hhhcccccccccccccccCCCCCCCCCCCCcceEeec
Q 003385 398 D-PCL-PVP--WSWLQCNSDPQPSITVIHLSSKNLTGNIPS--DLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLE 471 (824)
Q Consensus 398 d-pc~-~~~--~~~~~c~~~~~~~L~~L~L~~n~l~g~lp~--~i~~L~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~ 471 (824)
. -.. ..| +....-....+++|+.|+|++|+|+ .+|. .|++|++|+.|+|++|+|+ .+|.++++++|+.|+|+
T Consensus 526 ~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp~~~~L~~L~~L~Ls 603 (876)
T 4ecn_A 526 RGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLEAFGTNVKLTDLKLD 603 (876)
T ss_dssp TTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCCCCCTTSEESEEECC
T ss_pred CCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cchhhcCCCcceEEECc
Confidence 1 110 000 1000002234668999999999999 8998 8999999999999999999 55588999999999999
Q ss_pred ccccCCCCCccccCCCc-cceeeecccccccccccccccc----ceeccccCCc
Q 003385 472 DNQLTGPLPSSLMNLPN-LRELYVQNNMLSGTVPSSLLSK----NVVLNYAGNI 520 (824)
Q Consensus 472 ~N~l~g~lP~~l~~l~~-L~~L~l~~N~l~g~ip~~l~~~----~~~l~~~~n~ 520 (824)
+|+|+ .+|..++++++ |+.|+|++|+++ .+|..+... +..+.+++|.
T Consensus 604 ~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~ 655 (876)
T 4ecn_A 604 YNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNK 655 (876)
T ss_dssp SSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSC
T ss_pred CCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcCCc
Confidence 99999 89999999998 999999999999 888765432 4566667664
No 325
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.40 E-value=4e-13 Score=152.59 Aligned_cols=140 Identities=19% Similarity=0.137 Sum_probs=121.2
Q ss_pred ccccceeeecccccCCCCCCcc-cchhhhceeccCCCCCCcHHHHHHHHHhcCCCCcccCCCCCCCCCCCCeeEcCCCCC
Q 003385 337 LSLPFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQ 415 (824)
Q Consensus 337 ~~l~~l~~L~L~~n~~s~LPP~-i~~le~l~~L~l~~n~~~~~~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~c~~~~~ 415 (824)
...++|+.|+|+.|.++.++|. +..++.|+.|+++.|.+.. ..|. ....+
T Consensus 272 ~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~-------------------~~~~----------~~~~l 322 (455)
T 3v47_A 272 LEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINK-------------------IDDN----------AFWGL 322 (455)
T ss_dssp GTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCE-------------------ECTT----------TTTTC
T ss_pred ccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccc-------------------cChh----------HhcCc
Confidence 3456899999999999998776 9999999999999998763 1110 11346
Q ss_pred CceeEEEecCCCCCccCChhhhcccccccccccccccCCCCCC-CCCCCCcceEeecccccCCCCCccccCCCccceeee
Q 003385 416 PSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYV 494 (824)
Q Consensus 416 ~~L~~L~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~L~~L~l 494 (824)
++|+.|+|++|++++..|..|+++++|+.|+|++|++++.+|. +.++++|+.|+|++|+|++..+..++.+++|+.|+|
T Consensus 323 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 402 (455)
T 3v47_A 323 THLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWL 402 (455)
T ss_dssp TTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEEC
T ss_pred ccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEc
Confidence 7999999999999988889999999999999999999999775 999999999999999999766667899999999999
Q ss_pred ccccccccccc
Q 003385 495 QNNMLSGTVPS 505 (824)
Q Consensus 495 ~~N~l~g~ip~ 505 (824)
++|++++..|.
T Consensus 403 ~~N~l~~~~~~ 413 (455)
T 3v47_A 403 HTNPWDCSCPR 413 (455)
T ss_dssp CSSCBCCCTTT
T ss_pred cCCCcccCCCc
Confidence 99999988883
No 326
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.39 E-value=3.9e-14 Score=146.92 Aligned_cols=99 Identities=17% Similarity=0.107 Sum_probs=65.1
Q ss_pred EEEecCC-CCCccCChhhhcccccc-cccccccccCCCCCCCCCCCCcceEeecccc-cCCCCCccccCC-Cccceeeec
Q 003385 420 VIHLSSK-NLTGNIPSDLTKLSSLV-ELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQ-LTGPLPSSLMNL-PNLRELYVQ 495 (824)
Q Consensus 420 ~L~L~~n-~l~g~lp~~i~~L~~L~-~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~-l~g~lP~~l~~l-~~L~~L~l~ 495 (824)
.|+|++| ++++..+..|.++++|+ .|+|++|+++.+++.....++|+.|+|++|+ |++..+..|..+ ++|+.|+|+
T Consensus 134 ~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~ 213 (239)
T 2xwt_C 134 ILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVS 213 (239)
T ss_dssp EEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTTCEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECT
T ss_pred EEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCCCCCCEEEcCCCCCcccCCHHHhhccccCCcEEECC
Confidence 7777777 77744445577777777 7777777777555543233677777777774 774445567777 777777777
Q ss_pred cccccccccccccccceeccccCC
Q 003385 496 NNMLSGTVPSSLLSKNVVLNYAGN 519 (824)
Q Consensus 496 ~N~l~g~ip~~l~~~~~~l~~~~n 519 (824)
+|+++ .+|...+..+..+.+.++
T Consensus 214 ~N~l~-~l~~~~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 214 QTSVT-ALPSKGLEHLKELIARNT 236 (239)
T ss_dssp TCCCC-CCCCTTCTTCSEEECTTC
T ss_pred CCccc-cCChhHhccCceeeccCc
Confidence 77777 666666665555555544
No 327
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.39 E-value=5.1e-13 Score=144.28 Aligned_cols=155 Identities=20% Similarity=0.196 Sum_probs=118.8
Q ss_pred cccceeeecccccCCCCCCcc-cchhhhceeccCCCCCCcHHHHHHHHHhcCCCCcccCCCCCCCCCCCCeeEcCCCCCC
Q 003385 338 SLPFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQP 416 (824)
Q Consensus 338 ~l~~l~~L~L~~n~~s~LPP~-i~~le~l~~L~l~~n~~~~~~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~c~~~~~~ 416 (824)
.+++|+.|+|+.|.++.+||. +..++.|+.|+++.|++..... +. ..-| ...++
T Consensus 143 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--~~------------~~~~-----------~~~l~ 197 (310)
T 4glp_A 143 LKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERG--LM------------AALC-----------PHKFP 197 (310)
T ss_dssp BCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHH--HH------------TTSC-----------TTSSC
T ss_pred hccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchh--hh------------HHHh-----------hhcCC
Confidence 477899999999999999975 8999999999999998643110 00 0001 02456
Q ss_pred ceeEEEecCCCCCccCCh----hhhcccccccccccccccCCCCC-CCCCC---CCcceEeecccccCCCCCccccCCCc
Q 003385 417 SITVIHLSSKNLTGNIPS----DLTKLSSLVELWLDGNSLTGPIP-DFSGC---PDLRIIHLEDNQLTGPLPSSLMNLPN 488 (824)
Q Consensus 417 ~L~~L~L~~n~l~g~lp~----~i~~L~~L~~L~L~~N~l~~~~p-~~~~l---~~L~~L~L~~N~l~g~lP~~l~~l~~ 488 (824)
+|++|+|++|+|+ .+|. .++++++|+.|+|++|+|++..| .+..+ ++|+.|+|++|+|+ .+|..+. ++
T Consensus 198 ~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~ 273 (310)
T 4glp_A 198 AIQNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AK 273 (310)
T ss_dssp CCCSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SC
T ss_pred CCCEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CC
Confidence 8999999999998 5554 25788999999999999999854 46665 69999999999999 8888875 79
Q ss_pred cceeeeccccccccccc-cccccceeccccCCccc
Q 003385 489 LRELYVQNNMLSGTVPS-SLLSKNVVLNYAGNINL 522 (824)
Q Consensus 489 L~~L~l~~N~l~g~ip~-~l~~~~~~l~~~~n~~l 522 (824)
|+.|+|++|++++ +|. .-+..+..+.+++|+..
T Consensus 274 L~~L~Ls~N~l~~-~~~~~~l~~L~~L~L~~N~l~ 307 (310)
T 4glp_A 274 LRVLDLSSNRLNR-APQPDELPEVDNLTLDGNPFL 307 (310)
T ss_dssp CSCEECCSCCCCS-CCCTTSCCCCSCEECSSTTTS
T ss_pred CCEEECCCCcCCC-CchhhhCCCccEEECcCCCCC
Confidence 9999999999995 332 22345567778888643
No 328
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.39 E-value=4.1e-13 Score=158.44 Aligned_cols=184 Identities=14% Similarity=0.071 Sum_probs=136.0
Q ss_pred ccccceeeecccccCCCCCCcccchhhhceeccCCCCCCcHH-HHHHHHHhcCCCCcccCCCCCCCCCCCCeeE-cCCCC
Q 003385 337 LSLPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGV-AIVSVISLYSSADWAQEGGDPCLPVPWSWLQ-CNSDP 414 (824)
Q Consensus 337 ~~l~~l~~L~L~~n~~s~LPP~i~~le~l~~L~l~~n~~~~~-~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~-c~~~~ 414 (824)
..+.+|+.|++..+....+++.+..++.|+.+++..+..... ....+..+..+.....+. + ....+. .....
T Consensus 394 ~~~~~L~~L~~~~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~---n---~l~~~~~~~~~~ 467 (635)
T 4g8a_A 394 FGTISLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISH---T---HTRVAFNGIFNG 467 (635)
T ss_dssp HSCSCCCEEECCSCSEEEECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTT---S---CCEECCTTTTTT
T ss_pred hhhhhhhhhhccccccccccccccccccccchhhhhccccccccccccccccccccccccc---c---cccccccccccc
Confidence 345678888899999999988888899999988876543321 001111111111111000 0 001110 12245
Q ss_pred CCceeEEEecCCCC-CccCChhhhcccccccccccccccCCCCCC-CCCCCCcceEeecccccCCCCCccccCCCcccee
Q 003385 415 QPSITVIHLSSKNL-TGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLREL 492 (824)
Q Consensus 415 ~~~L~~L~L~~n~l-~g~lp~~i~~L~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~L~~L 492 (824)
+++|+.|+|++|++ .+.+|..|..|++|+.|+|++|+|++++|. |.+|++|+.|+|++|+|++..|..|++|++|+.|
T Consensus 468 ~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L 547 (635)
T 4g8a_A 468 LSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVL 547 (635)
T ss_dssp CTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEE
T ss_pred chhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEE
Confidence 67999999999985 456788999999999999999999999886 8999999999999999998888899999999999
Q ss_pred eecccccccccccccc---ccceeccccCCccccCCC
Q 003385 493 YVQNNMLSGTVPSSLL---SKNVVLNYAGNINLHEGG 526 (824)
Q Consensus 493 ~l~~N~l~g~ip~~l~---~~~~~l~~~~n~~lc~~~ 526 (824)
+|++|+|++..|..+. ..+..+.+++|+..|.+.
T Consensus 548 ~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~ 584 (635)
T 4g8a_A 548 DYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCE 584 (635)
T ss_dssp ECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGG
T ss_pred ECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCC
Confidence 9999999966666553 345678899999999874
No 329
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.39 E-value=5.4e-14 Score=154.72 Aligned_cols=138 Identities=23% Similarity=0.144 Sum_probs=80.8
Q ss_pred ceeeecccccCCCCCCc-ccchhhhceeccCCCCCCcHHHHHHHHHhcCCCCcccCCCCCCCCCCCCeeEcCCCCCCcee
Q 003385 341 FVLSFKFGKTYDSSRGP-LLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSIT 419 (824)
Q Consensus 341 ~l~~L~L~~n~~s~LPP-~i~~le~l~~L~l~~n~~~~~~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~c~~~~~~~L~ 419 (824)
.|+.|+|+.|.++.+|+ .+..++.|+.|+++.|.+.......+ ..+++|+
T Consensus 53 ~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~-----------------------------~~l~~L~ 103 (353)
T 2z80_A 53 AVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSF-----------------------------SSLGSLE 103 (353)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTT-----------------------------TTCTTCC
T ss_pred cCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhc-----------------------------CCCCCCC
Confidence 57788888888888888 48888888888888877653111111 2234566
Q ss_pred EEEecCCCCCccCChhhhcccccccccccccccCCCCC--CCCCCCCcceEeeccc-ccCCCCCccccCCCccceeeecc
Q 003385 420 VIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIP--DFSGCPDLRIIHLEDN-QLTGPLPSSLMNLPNLRELYVQN 496 (824)
Q Consensus 420 ~L~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~p--~~~~l~~L~~L~L~~N-~l~g~lP~~l~~l~~L~~L~l~~ 496 (824)
+|+|++|++++..+..|+++++|+.|+|++|++++.++ .+.++++|+.|+|++| .+++..|..++++++|++|++++
T Consensus 104 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~ 183 (353)
T 2z80_A 104 HLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDA 183 (353)
T ss_dssp EEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEE
T ss_pred EEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCC
Confidence 66666666653222235556666666666666655554 2555666666666665 34433345555566666666666
Q ss_pred ccccccccccc
Q 003385 497 NMLSGTVPSSL 507 (824)
Q Consensus 497 N~l~g~ip~~l 507 (824)
|++++..|..+
T Consensus 184 n~l~~~~~~~l 194 (353)
T 2z80_A 184 SDLQSYEPKSL 194 (353)
T ss_dssp TTCCEECTTTT
T ss_pred CCcCccCHHHH
Confidence 66654334433
No 330
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.39 E-value=2.1e-13 Score=156.26 Aligned_cols=173 Identities=16% Similarity=0.119 Sum_probs=103.5
Q ss_pred ceeeecccccCCCCCCcc-cchhhhceeccCCCCCCcHHHHHHHHHhcCCCCcccCCCCCCCCCCCCeeEc-CCCCCCce
Q 003385 341 FVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQC-NSDPQPSI 418 (824)
Q Consensus 341 ~l~~L~L~~n~~s~LPP~-i~~le~l~~L~l~~n~~~~~~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~c-~~~~~~~L 418 (824)
.++.|+|+.|.++.++|. +..++.|+.|+++.|.+.......+..+..++.+..+++. ...+.. ....+++|
T Consensus 33 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~------l~~~~~~~~~~l~~L 106 (477)
T 2id5_A 33 ETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNR------LKLIPLGVFTGLSNL 106 (477)
T ss_dssp TCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC------CCSCCTTSSTTCTTC
T ss_pred CCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCc------CCccCcccccCCCCC
Confidence 455666666666666543 6666666666666665544322233333333332221110 011111 11345678
Q ss_pred eEEEecCCCCCccCChhhhcccccccccccccccCCCCCC-CCCCCCcceEeecccccCCCCCccccCCCccceeeeccc
Q 003385 419 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNN 497 (824)
Q Consensus 419 ~~L~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~L~~L~l~~N 497 (824)
++|+|++|++++..|..|.++++|+.|+|++|++++..+. |.++++|+.|+|++|++++..+..++++++|+.|+|++|
T Consensus 107 ~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n 186 (477)
T 2id5_A 107 TKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHL 186 (477)
T ss_dssp CEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESC
T ss_pred CEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCC
Confidence 8888888888777777777888888888888888777664 777788888888888877554556777777888888877
Q ss_pred ccccccccccccc---ceeccccCCc
Q 003385 498 MLSGTVPSSLLSK---NVVLNYAGNI 520 (824)
Q Consensus 498 ~l~g~ip~~l~~~---~~~l~~~~n~ 520 (824)
.++ .++...+.. +..+.+++|.
T Consensus 187 ~i~-~~~~~~~~~l~~L~~L~l~~~~ 211 (477)
T 2id5_A 187 NIN-AIRDYSFKRLYRLKVLEISHWP 211 (477)
T ss_dssp CCC-EECTTCSCSCTTCCEEEEECCT
T ss_pred cCc-EeChhhcccCcccceeeCCCCc
Confidence 777 344433322 2444455543
No 331
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.39 E-value=4.6e-13 Score=155.03 Aligned_cols=157 Identities=17% Similarity=0.217 Sum_probs=127.3
Q ss_pred cccceeeecccccCCCC-CCcccchhhhceeccCCCCCCcHHHHHHHHHhcCCCCcccCCCCCCCCCCCCeeEcCCCCCC
Q 003385 338 SLPFVLSFKFGKTYDSS-RGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQP 416 (824)
Q Consensus 338 ~l~~l~~L~L~~n~~s~-LPP~i~~le~l~~L~l~~n~~~~~~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~c~~~~~~ 416 (824)
.++.|+.|+|++|.++. +|+.+..++.|+.|+++.|.+..... +.. ....++
T Consensus 322 ~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~--~~~-------------------------~~~~l~ 374 (520)
T 2z7x_B 322 KISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSK--IAE-------------------------MTTQMK 374 (520)
T ss_dssp SCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHH--HHH-------------------------HHTTCT
T ss_pred hCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCcccc--chH-------------------------HHhhCC
Confidence 56788999999999998 66679999999999999998774210 000 012356
Q ss_pred ceeEEEecCCCCCccCChh-hhcccccccccccccccCCCCCC-CCCCCCcceEeecccccCCCCCccccCCCccceeee
Q 003385 417 SITVIHLSSKNLTGNIPSD-LTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYV 494 (824)
Q Consensus 417 ~L~~L~L~~n~l~g~lp~~-i~~L~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~L~~L~l 494 (824)
+|+.|+|++|++++.+|.. +..+++|+.|+|++|++++..|. +. ++|+.|+|++|+|+ .+|..+..+++|+.|+|
T Consensus 375 ~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L 451 (520)
T 2z7x_B 375 SLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNV 451 (520)
T ss_dssp TCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEEC
T ss_pred CCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEEC
Confidence 8999999999999767774 88899999999999999887664 43 78999999999999 89998889999999999
Q ss_pred ccccccccccccccc---cceeccccCCccccCC
Q 003385 495 QNNMLSGTVPSSLLS---KNVVLNYAGNINLHEG 525 (824)
Q Consensus 495 ~~N~l~g~ip~~l~~---~~~~l~~~~n~~lc~~ 525 (824)
++|+++ .+|...+. .+..+.+++|+..|.+
T Consensus 452 ~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~c 484 (520)
T 2z7x_B 452 ASNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSC 484 (520)
T ss_dssp CSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred CCCcCC-ccCHHHhccCCcccEEECcCCCCcccC
Confidence 999999 88887443 3467788999988865
No 332
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.38 E-value=5e-13 Score=144.37 Aligned_cols=169 Identities=22% Similarity=0.258 Sum_probs=127.7
Q ss_pred ccccceeeecccccCCCCCCcccchhhhceeccCCCCCCcHHHHHHHHHhcCCCCcccCCCCCCCCCCCCeeEcCCCCCC
Q 003385 337 LSLPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQP 416 (824)
Q Consensus 337 ~~l~~l~~L~L~~n~~s~LPP~i~~le~l~~L~l~~n~~~~~~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~c~~~~~~ 416 (824)
..+++|+.|++..|.++.+| .+..++.|+.|+++.|.+..... +..+..++.+..+++. - ..+. ....++
T Consensus 38 ~~l~~L~~L~l~~~~i~~l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~-l-----~~~~-~~~~l~ 107 (308)
T 1h6u_A 38 ADLDGITTLSAFGTGVTTIE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNP-L-----KNVS-AIAGLQ 107 (308)
T ss_dssp HHHHTCCEEECTTSCCCCCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCC-C-----SCCG-GGTTCT
T ss_pred HHcCCcCEEEeeCCCccCch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCc-C-----CCch-hhcCCC
Confidence 34778999999999999997 68999999999999998765332 4444445444332211 1 1111 234578
Q ss_pred ceeEEEecCCCCCccCChhhhcccccccccccccccCCCCCCCCCCCCcceEeecccccCCCCCccccCCCccceeeecc
Q 003385 417 SITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQN 496 (824)
Q Consensus 417 ~L~~L~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~L~~L~l~~ 496 (824)
+|+.|+|++|++++ +|. +..|++|+.|+|++|++++.++ +..+++|+.|+|++|+|++ +|. ++.+++|+.|+|++
T Consensus 108 ~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~ 182 (308)
T 1h6u_A 108 SIKTLDLTSTQITD-VTP-LAGLSNLQVLYLDLNQITNISP-LAGLTNLQYLSIGNAQVSD-LTP-LANLSKLTTLKADD 182 (308)
T ss_dssp TCCEEECTTSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG-GGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCS
T ss_pred CCCEEECCCCCCCC-chh-hcCCCCCCEEECCCCccCcCcc-ccCCCCccEEEccCCcCCC-Chh-hcCCCCCCEEECCC
Confidence 99999999999994 554 8999999999999999998776 8889999999999999994 555 89999999999999
Q ss_pred ccccccccccccccceeccccCCc
Q 003385 497 NMLSGTVPSSLLSKNVVLNYAGNI 520 (824)
Q Consensus 497 N~l~g~ip~~l~~~~~~l~~~~n~ 520 (824)
|++++..|-.-+..+..+.+++|.
T Consensus 183 n~l~~~~~l~~l~~L~~L~L~~N~ 206 (308)
T 1h6u_A 183 NKISDISPLASLPNLIEVHLKNNQ 206 (308)
T ss_dssp SCCCCCGGGGGCTTCCEEECTTSC
T ss_pred CccCcChhhcCCCCCCEEEccCCc
Confidence 999944333334445667777774
No 333
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.38 E-value=1.8e-13 Score=149.26 Aligned_cols=175 Identities=26% Similarity=0.194 Sum_probs=121.5
Q ss_pred cccceeeecccccCCCCCCcccchhhhceeccCCCCCCcHHHHHHHHHhcCCCCcccCCCCCCCCCCCCeeEcCCCCCCc
Q 003385 338 SLPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPS 417 (824)
Q Consensus 338 ~l~~l~~L~L~~n~~s~LPP~i~~le~l~~L~l~~n~~~~~~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~c~~~~~~~ 417 (824)
.+++|++|+|+.|.++.+|+.+. +.|+.|+++.|.+.......+..+..+......++.-. ...........+ +
T Consensus 100 ~l~~L~~L~L~~n~l~~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~---~~~~~~~~~~~l-~ 173 (332)
T 2ft3_A 100 PLRKLQKLYISKNHLVEIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLE---NSGFEPGAFDGL-K 173 (332)
T ss_dssp TCTTCCEEECCSSCCCSCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCB---GGGSCTTSSCSC-C
T ss_pred CcCCCCEEECCCCcCCccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccc---cCCCCcccccCC-c
Confidence 35678888888888888888776 78888888888766432222233323333222111000 000000111223 7
Q ss_pred eeEEEecCCCCCccCChhhhcccccccccccccccCCCCCC-CCCCCCcceEeecccccCCCCCccccCCCccceeeecc
Q 003385 418 ITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQN 496 (824)
Q Consensus 418 L~~L~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~L~~L~l~~ 496 (824)
|+.|+|++|+++ .+|..+. ++|+.|+|++|++++.++. +.++++|+.|+|++|+|++..|..++.+++|+.|+|++
T Consensus 174 L~~L~l~~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 250 (332)
T 2ft3_A 174 LNYLRISEAKLT-GIPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDN 250 (332)
T ss_dssp CSCCBCCSSBCS-SCCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCS
T ss_pred cCEEECcCCCCC-ccCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCC
Confidence 888888888888 5776654 7899999999999998864 88999999999999999987777899999999999999
Q ss_pred ccccccccccccc--cceeccccCCccc
Q 003385 497 NMLSGTVPSSLLS--KNVVLNYAGNINL 522 (824)
Q Consensus 497 N~l~g~ip~~l~~--~~~~l~~~~n~~l 522 (824)
|+++ .+|..+.. .+..+.+++|...
T Consensus 251 N~l~-~lp~~l~~l~~L~~L~l~~N~l~ 277 (332)
T 2ft3_A 251 NKLS-RVPAGLPDLKLLQVVYLHTNNIT 277 (332)
T ss_dssp SCCC-BCCTTGGGCTTCCEEECCSSCCC
T ss_pred CcCe-ecChhhhcCccCCEEECCCCCCC
Confidence 9999 89887643 3466777777543
No 334
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.38 E-value=3.3e-13 Score=159.18 Aligned_cols=177 Identities=20% Similarity=0.185 Sum_probs=109.6
Q ss_pred ccceeeecccccCCCCCCcccchhhhceeccCCCCCCcHHHHHHHHHhcCCCCcccCCCCCCCCCCCCeeEcCCCCCCce
Q 003385 339 LPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 418 (824)
Q Consensus 339 l~~l~~L~L~~n~~s~LPP~i~~le~l~~L~l~~n~~~~~~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~c~~~~~~~L 418 (824)
+++|+.|+|+.|.++.+|+.+..+..|+.|+++.|.+.......+..+..+......+..-....+. -....+++|
T Consensus 277 l~~L~~L~l~~n~l~~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~----~~~~~l~~L 352 (606)
T 3t6q_A 277 FSGLQELDLTATHLSELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGT----GCLENLENL 352 (606)
T ss_dssp CTTCSEEECTTSCCSCCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCS----STTTTCTTC
T ss_pred ccCCCEEeccCCccCCCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccch----hhhhccCcC
Confidence 5678899999999999999899999999999998887654333333433333332211110000000 012345667
Q ss_pred eEEEecCCCCCccC--ChhhhcccccccccccccccCCCCCC-CCCCCCcceEeecccccCCCCCcc-ccCCCccceeee
Q 003385 419 TVIHLSSKNLTGNI--PSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSS-LMNLPNLRELYV 494 (824)
Q Consensus 419 ~~L~L~~n~l~g~l--p~~i~~L~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~g~lP~~-l~~l~~L~~L~l 494 (824)
++|+|++|++++.. |..+.++++|+.|+|++|++++.+|. +.++++|+.|+|++|++++..|.. ++++++|+.|++
T Consensus 353 ~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l 432 (606)
T 3t6q_A 353 RELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNL 432 (606)
T ss_dssp CEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEEC
T ss_pred CEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEEC
Confidence 77777777776544 56677777777777777777666554 666777777777777776655543 667777777777
Q ss_pred ccccccccccccc--cccceeccccCC
Q 003385 495 QNNMLSGTVPSSL--LSKNVVLNYAGN 519 (824)
Q Consensus 495 ~~N~l~g~ip~~l--~~~~~~l~~~~n 519 (824)
++|.+++..|..+ +..+..+.+++|
T Consensus 433 ~~n~l~~~~~~~~~~l~~L~~L~L~~n 459 (606)
T 3t6q_A 433 SHSLLDISSEQLFDGLPALQHLNLQGN 459 (606)
T ss_dssp TTCCCBTTCTTTTTTCTTCCEEECTTC
T ss_pred CCCccCCcCHHHHhCCCCCCEEECCCC
Confidence 7777764444443 223345555555
No 335
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.38 E-value=2.7e-13 Score=157.92 Aligned_cols=178 Identities=12% Similarity=0.015 Sum_probs=109.6
Q ss_pred cceeeecccccCCCCCCccc-chhhhceeccCCCCCCcHHHHHH---HHHhcCCCCcccCCCCCCCCCCCCeeE---cCC
Q 003385 340 PFVLSFKFGKTYDSSRGPLL-NAMEINKYLERNDGSIDGVAIVS---VISLYSSADWAQEGGDPCLPVPWSWLQ---CNS 412 (824)
Q Consensus 340 ~~l~~L~L~~n~~s~LPP~i-~~le~l~~L~l~~n~~~~~~l~~---lk~~~~~~~w~~~~~dpc~~~~~~~~~---c~~ 412 (824)
..|+.|+|++|.++.+|+.+ ..++.|+.|+++.|.+....+.. +..+..+.....+++. ...+. -..
T Consensus 310 ~~L~~L~l~~n~l~~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~------l~~~~~~~~~~ 383 (549)
T 2z81_A 310 EKVKRITVENSKVFLVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNH------LRSMQKTGEIL 383 (549)
T ss_dssp TTCCEEEEESSCCCCCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSC------CCCHHHHHHHG
T ss_pred ccceEEEeccCccccCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCc------ccccccchhhh
Confidence 45667777777777777665 45777777777777766543322 1122222222221110 11100 001
Q ss_pred CCCCceeEEEecCCCCCccCChhhhcccccccccccccccCCCCCCC------------------CCCCCcceEeecccc
Q 003385 413 DPQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDF------------------SGCPDLRIIHLEDNQ 474 (824)
Q Consensus 413 ~~~~~L~~L~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~p~~------------------~~l~~L~~L~L~~N~ 474 (824)
..+++|++|+|++|+++ .+|..++.+++|+.|+|++|+|++.+..+ .++++|+.|+|++|+
T Consensus 384 ~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~~l~~~~~~~L~~L~Ls~N~l~~~~~~l~~L~~L~Ls~N~ 462 (549)
T 2z81_A 384 LTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIRVVKTCIPQTLEVLDVSNNNLDSFSLFLPRLQELYISRNK 462 (549)
T ss_dssp GGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCSCCCTTSCTTCSEEECCSSCCSCCCCCCTTCCEEECCSSC
T ss_pred hcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCcccccchhcCCceEEECCCCChhhhcccCChhcEEECCCCc
Confidence 23456666666666666 56666666666666666666665433321 368889999999999
Q ss_pred cCCCCCccccCCCccceeeeccccccccccccc--cccceeccccCCccccCCC
Q 003385 475 LTGPLPSSLMNLPNLRELYVQNNMLSGTVPSSL--LSKNVVLNYAGNINLHEGG 526 (824)
Q Consensus 475 l~g~lP~~l~~l~~L~~L~l~~N~l~g~ip~~l--~~~~~~l~~~~n~~lc~~~ 526 (824)
|+ .+|. .+.+++|+.|+|++|++++..|..+ +..+..+.+++|+..|.++
T Consensus 463 l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 514 (549)
T 2z81_A 463 LK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 514 (549)
T ss_dssp CS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHH
T ss_pred cC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCc
Confidence 98 7887 5778999999999999995555433 3345678889999888653
No 336
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.38 E-value=3e-13 Score=140.23 Aligned_cols=149 Identities=17% Similarity=0.093 Sum_probs=111.7
Q ss_pred ceeeecccccCCCCCCc-ccchhhhceeccCCCCC-CcHHHHHHHHHhcCCCCcccCCCCCCCCCCCCeeEcCCCCCCce
Q 003385 341 FVLSFKFGKTYDSSRGP-LLNAMEINKYLERNDGS-IDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 418 (824)
Q Consensus 341 ~l~~L~L~~n~~s~LPP-~i~~le~l~~L~l~~n~-~~~~~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~c~~~~~~~L 418 (824)
.|+.|+|++|.++.+|+ .+..++.|+.|+++.|. +... .+ .. ...+++|
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i-------------------~~-----~~-----f~~l~~L 82 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQL-------------------ES-----HS-----FYNLSKV 82 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEE-------------------CT-----TT-----EESCTTC
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCccee-------------------CH-----hH-----cCCCcCC
Confidence 67889999999999998 48899999999999885 5531 00 00 1234688
Q ss_pred eEEEecC-CCCCccCChhhhcccccccccccccccCCCCCCCCCCCCcc---eEeeccc-ccCCCCCccccCCCccc-ee
Q 003385 419 TVIHLSS-KNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLR---IIHLEDN-QLTGPLPSSLMNLPNLR-EL 492 (824)
Q Consensus 419 ~~L~L~~-n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~p~~~~l~~L~---~L~L~~N-~l~g~lP~~l~~l~~L~-~L 492 (824)
++|+|++ |+|++..+..|.++++|+.|+|++|++++.+ .+..+++|+ .|+|++| ++++..+..|.++++|+ .|
T Consensus 83 ~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~lp-~~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L 161 (239)
T 2xwt_C 83 THIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKMFP-DLTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTL 161 (239)
T ss_dssp CEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCSCC-CCTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEE
T ss_pred cEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcccc-ccccccccccccEEECCCCcchhhcCcccccchhcceeEE
Confidence 8888888 8888555567888888888888888888844 477777777 8888888 88855556688888888 88
Q ss_pred eecccccccccccccccc--ceeccccCCc
Q 003385 493 YVQNNMLSGTVPSSLLSK--NVVLNYAGNI 520 (824)
Q Consensus 493 ~l~~N~l~g~ip~~l~~~--~~~l~~~~n~ 520 (824)
++++|+++ .+|...+.. +..+.+++|.
T Consensus 162 ~l~~n~l~-~i~~~~~~~~~L~~L~L~~n~ 190 (239)
T 2xwt_C 162 KLYNNGFT-SVQGYAFNGTKLDAVYLNKNK 190 (239)
T ss_dssp ECCSCCCC-EECTTTTTTCEEEEEECTTCT
T ss_pred EcCCCCCc-ccCHhhcCCCCCCEEEcCCCC
Confidence 88888888 888776654 3455666663
No 337
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.37 E-value=4.6e-13 Score=134.72 Aligned_cols=130 Identities=14% Similarity=0.226 Sum_probs=107.8
Q ss_pred ccceeeecccccCCCCCCcccchhhhceeccCCCCCCcHHHHHHHHHhcCCCCcccCCCCCCCCCCCCeeEcCCCCCCce
Q 003385 339 LPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 418 (824)
Q Consensus 339 l~~l~~L~L~~n~~s~LPP~i~~le~l~~L~l~~n~~~~~~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~c~~~~~~~L 418 (824)
+++|+.|+|++|.++.++ .+..++.|+.|+++.|.+... .+. ....+++|
T Consensus 65 l~~L~~L~l~~n~~~~~~-~l~~l~~L~~L~l~~n~l~~~-------------------~~~----------~l~~l~~L 114 (197)
T 4ezg_A 65 AHNIKDLTINNIHATNYN-PISGLSNLERLRIMGKDVTSD-------------------KIP----------NLSGLTSL 114 (197)
T ss_dssp CTTCSEEEEESCCCSCCG-GGTTCTTCCEEEEECTTCBGG-------------------GSC----------CCTTCTTC
T ss_pred CCCCCEEEccCCCCCcch-hhhcCCCCCEEEeECCccCcc-------------------cCh----------hhcCCCCC
Confidence 568899999999887774 788999999999999987630 000 01246799
Q ss_pred eEEEecCCCCCccCChhhhcccccccccccccc-cCCCCCCCCCCCCcceEeecccccCCCCCccccCCCccceeeeccc
Q 003385 419 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNS-LTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNN 497 (824)
Q Consensus 419 ~~L~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~-l~~~~p~~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~L~~L~l~~N 497 (824)
+.|+|++|++++..|..++++++|+.|+|++|+ ++. +|.+.++++|+.|+|++|+|++ ++ .+..+++|+.|++++|
T Consensus 115 ~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~-~~~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~N 191 (197)
T 4ezg_A 115 TLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITD-IMPLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFSQ 191 (197)
T ss_dssp CEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCC-CGGGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECBC
T ss_pred CEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCccc-cHhhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeCc
Confidence 999999999998899999999999999999998 555 4579999999999999999994 66 7999999999999999
Q ss_pred cccc
Q 003385 498 MLSG 501 (824)
Q Consensus 498 ~l~g 501 (824)
++.+
T Consensus 192 ~i~~ 195 (197)
T 4ezg_A 192 TIGG 195 (197)
T ss_dssp ----
T ss_pred ccCC
Confidence 9873
No 338
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.36 E-value=8.9e-14 Score=167.68 Aligned_cols=91 Identities=21% Similarity=0.265 Sum_probs=46.9
Q ss_pred CceeEEEecCCCCCccCChhhhcccccccccccccccCCCCCCCCCCCCcceEeecccccCCCCCccccCCCc-cceeee
Q 003385 416 PSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPN-LRELYV 494 (824)
Q Consensus 416 ~~L~~L~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~-L~~L~l 494 (824)
++|+.|+|++|+|+ .+|..|++|++|+.|+|++|.|+.++++|++|++|+.|+|++|+|++.+|..++.+.. +..|+|
T Consensus 270 ~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l 348 (727)
T 4b8c_D 270 SNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVTTLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYL 348 (727)
T ss_dssp TTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCCCCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCCccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhh
Confidence 45555555555555 5555555555555555555555544444555555555555555555555554444322 122455
Q ss_pred ccccccccccccc
Q 003385 495 QNNMLSGTVPSSL 507 (824)
Q Consensus 495 ~~N~l~g~ip~~l 507 (824)
++|.++|.+|.++
T Consensus 349 ~~N~l~~~~p~~l 361 (727)
T 4b8c_D 349 RDNRPEIPLPHER 361 (727)
T ss_dssp HHCCCCCCCCCC-
T ss_pred ccCcccCcCcccc
Confidence 5555555555443
No 339
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.36 E-value=1.2e-12 Score=128.58 Aligned_cols=84 Identities=29% Similarity=0.351 Sum_probs=44.7
Q ss_pred ceeEEEecCCCCCccCChhhhcccccccccccccccCCCCCC-CCCCCCcceEeecccccCCCCCccccCCCccceeeec
Q 003385 417 SITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQ 495 (824)
Q Consensus 417 ~L~~L~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~L~~L~l~ 495 (824)
+|+.|+|++|+|++..|..|.+|++|+.|+|++|+|+++++. |.++++|+.|+|++|+|++..|..|.++++|+.|+|+
T Consensus 31 ~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 110 (170)
T 3g39_A 31 TTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWLL 110 (170)
T ss_dssp TCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCccCEeCHHHhcCCCCCCEEEeC
Confidence 445555555555544455555555555555555555555554 4555555555555555553333345555555555555
Q ss_pred ccccc
Q 003385 496 NNMLS 500 (824)
Q Consensus 496 ~N~l~ 500 (824)
+|+++
T Consensus 111 ~N~~~ 115 (170)
T 3g39_A 111 NNPWD 115 (170)
T ss_dssp SSCBC
T ss_pred CCCCC
Confidence 55554
No 340
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.36 E-value=1.1e-12 Score=131.85 Aligned_cols=129 Identities=18% Similarity=0.176 Sum_probs=109.0
Q ss_pred eeecccccCCCCCCcccchhhhceeccCCCCCCcHHHHHHHHHhcCCCCcccCCCCCCCCCCCCeeEcCCCCCCceeEEE
Q 003385 343 LSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSITVIH 422 (824)
Q Consensus 343 ~~L~L~~n~~s~LPP~i~~le~l~~L~l~~n~~~~~~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~c~~~~~~~L~~L~ 422 (824)
+.++++.|.++.+|+.+. +.++.|+++.|.+... .. ....+++|+.|+
T Consensus 13 ~~l~~~~~~l~~ip~~~~--~~l~~L~L~~n~i~~i-----------p~-------------------~~~~l~~L~~L~ 60 (193)
T 2wfh_A 13 TVVRCSNKGLKVLPKGIP--RDVTELYLDGNQFTLV-----------PK-------------------ELSNYKHLTLID 60 (193)
T ss_dssp TEEECTTSCCSSCCSCCC--TTCCEEECCSSCCCSC-----------CG-------------------GGGGCTTCCEEE
T ss_pred CEEEcCCCCCCcCCCCCC--CCCCEEECCCCcCchh-----------HH-------------------HhhcccCCCEEE
Confidence 356788999999998765 5799999999877630 00 112457899999
Q ss_pred ecCCCCCccCChhhhcccccccccccccccCCCCCC-CCCCCCcceEeecccccCCCCCccccCCCccceeeeccccccc
Q 003385 423 LSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNMLSG 501 (824)
Q Consensus 423 L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~L~~L~l~~N~l~g 501 (824)
|++|+|++..|..|.+|++|+.|+|++|+|++++|. |.++++|+.|+|++|+|++..+..|..+++|+.|+|++|++..
T Consensus 61 Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 61 LSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 999999977778899999999999999999999986 9999999999999999996555679999999999999999974
Q ss_pred cc
Q 003385 502 TV 503 (824)
Q Consensus 502 ~i 503 (824)
.-
T Consensus 141 ~c 142 (193)
T 2wfh_A 141 DC 142 (193)
T ss_dssp SG
T ss_pred CC
Confidence 33
No 341
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.36 E-value=1.5e-12 Score=128.58 Aligned_cols=103 Identities=21% Similarity=0.343 Sum_probs=57.4
Q ss_pred eEEEecCCCCCccCChhhhcccccccccccccccCCCCCC-CCCCCCcceEeecccccCCCCCccccCCCccceeeeccc
Q 003385 419 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNN 497 (824)
Q Consensus 419 ~~L~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~L~~L~l~~N 497 (824)
+.|++++|+|+ .+|..+. ++|+.|+|++|+|++.+|. |.++++|+.|+|++|+|++..+..|+++++|+.|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 45666666665 5555543 5566666666666665553 556666666666666666433334456666666666666
Q ss_pred cccccccccccc---cceeccccCCccccCC
Q 003385 498 MLSGTVPSSLLS---KNVVLNYAGNINLHEG 525 (824)
Q Consensus 498 ~l~g~ip~~l~~---~~~~l~~~~n~~lc~~ 525 (824)
+|+ .+|...+. .+..+.+.+|+..|..
T Consensus 92 ~l~-~l~~~~~~~l~~L~~L~L~~N~~~c~~ 121 (174)
T 2r9u_A 92 HLK-SIPRGAFDNLKSLTHIYLYNNPWDCEC 121 (174)
T ss_dssp CCC-CCCTTTTTTCTTCSEEECCSSCBCTTB
T ss_pred ccc-eeCHHHhccccCCCEEEeCCCCccccc
Confidence 666 45544322 2344555566555543
No 342
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.36 E-value=2.2e-12 Score=127.24 Aligned_cols=121 Identities=24% Similarity=0.268 Sum_probs=102.6
Q ss_pred CCCeeEcCCCC--------CCceeEEEecCCCCCccCChhhhcccccccccccccccCCCCCC-CCCCCCcceEeecccc
Q 003385 404 PWSWLQCNSDP--------QPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQ 474 (824)
Q Consensus 404 ~~~~~~c~~~~--------~~~L~~L~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~L~~N~ 474 (824)
.|..+.|+... .++|+.|+|++|++++..+..|.++++|+.|+|++|+|++.++. +.++++|+.|+|++|+
T Consensus 8 ~~~~l~~~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~ 87 (177)
T 2o6r_A 8 SGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENK 87 (177)
T ss_dssp ETTEEECCSSCCSSCCTTCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred CCCEEEecCCCCccCCCCCCCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCC
Confidence 46667775422 36899999999999966666789999999999999999998887 7999999999999999
Q ss_pred cCCCCCccccCCCccceeeeccccccccccccccc---cceeccccCCccccCC
Q 003385 475 LTGPLPSSLMNLPNLRELYVQNNMLSGTVPSSLLS---KNVVLNYAGNINLHEG 525 (824)
Q Consensus 475 l~g~lP~~l~~l~~L~~L~l~~N~l~g~ip~~l~~---~~~~l~~~~n~~lc~~ 525 (824)
|++..|..++.+++|+.|+|++|+++ .+|...+. .+..+.+.+|+..|..
T Consensus 88 l~~~~~~~~~~l~~L~~L~l~~N~l~-~~~~~~~~~l~~L~~L~l~~N~~~~~~ 140 (177)
T 2o6r_A 88 LQSLPNGVFDKLTQLKELALDTNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSC 140 (177)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCS-CCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred ccccCHHHhhCCcccCEEECcCCcce-EeCHHHhcCCcccCEEEecCCCeeccC
Confidence 99777777899999999999999999 78877654 4467788999877754
No 343
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.36 E-value=5.7e-13 Score=140.60 Aligned_cols=146 Identities=15% Similarity=0.130 Sum_probs=72.6
Q ss_pred ccceeeecccccCCCCCCcccchhhhceeccCCCCCCcHHHHHHHHHhcCCCCcccCCCCCCCCCCCCeeEcCCCCCCce
Q 003385 339 LPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 418 (824)
Q Consensus 339 l~~l~~L~L~~n~~s~LPP~i~~le~l~~L~l~~n~~~~~~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~c~~~~~~~L 418 (824)
++.|+.|+|+.|.++.+| .+..++.|+.|+++.|.+..... +..+..+..+..+++.-. ..... .. ++|
T Consensus 40 l~~L~~L~l~~n~i~~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~l~---~l~~~----~~-~~L 108 (263)
T 1xeu_A 40 LSGVQNFNGDNSNIQSLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNRNRLK---NLNGI----PS-ACL 108 (263)
T ss_dssp HTTCSEEECTTSCCCCCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSCCS---CCTTC----CC-SSC
T ss_pred cCcCcEEECcCCCcccch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECCCCccC---CcCcc----cc-Ccc
Confidence 456666666666666665 56666666666666665543111 111111111111000000 00000 01 355
Q ss_pred eEEEecCCCCCccCChhhhcccccccccccccccCCCCCCCCCCCCcceEeecccccCCCCCccccCCCccceeeecccc
Q 003385 419 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNM 498 (824)
Q Consensus 419 ~~L~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~L~~L~l~~N~ 498 (824)
+.|+|++|+|++ +| .+.+|++|+.|+|++|+|++. +.+..+++|+.|+|++|+|++. ..+..+++|+.|++++|+
T Consensus 109 ~~L~L~~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~~-~~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~ 183 (263)
T 1xeu_A 109 SRLFLDNNELRD-TD-SLIHLKNLEILSIRNNKLKSI-VMLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQK 183 (263)
T ss_dssp CEEECCSSCCSB-SG-GGTTCTTCCEEECTTSCCCBC-GGGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEE
T ss_pred cEEEccCCccCC-Ch-hhcCcccccEEECCCCcCCCC-hHHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCc
Confidence 566666666553 33 355556666666666665554 2455555666666666665533 445555566666666665
Q ss_pred cc
Q 003385 499 LS 500 (824)
Q Consensus 499 l~ 500 (824)
++
T Consensus 184 ~~ 185 (263)
T 1xeu_A 184 CV 185 (263)
T ss_dssp EE
T ss_pred cc
Confidence 55
No 344
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.36 E-value=5.5e-13 Score=145.89 Aligned_cols=170 Identities=17% Similarity=0.216 Sum_probs=117.7
Q ss_pred cccceeeecccccCCCCCCcccchhhhceeccCCCCCCcHHHHHHHHHhcCCCCcccCCCCCCCCCCCCeeEcCCCCCCc
Q 003385 338 SLPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPS 417 (824)
Q Consensus 338 ~l~~l~~L~L~~n~~s~LPP~i~~le~l~~L~l~~n~~~~~~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~c~~~~~~~ 417 (824)
.+++|+.|+++.|.++.+++ +..++.|+.|+++.|.+..... +..+..+.....++ |. ...+.. ...+++
T Consensus 175 ~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~---n~---l~~~~~-~~~l~~ 244 (347)
T 4fmz_A 175 NLTDLYSLSLNYNQIEDISP-LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGN---NK---ITDLSP-LANLSQ 244 (347)
T ss_dssp GCTTCSEEECTTSCCCCCGG-GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCS---SC---CCCCGG-GTTCTT
T ss_pred cCCCCCEEEccCCccccccc-ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccC---Cc---cCCCcc-hhcCCC
Confidence 35567777778888777777 7777777777777776554221 22222333322211 10 111111 235678
Q ss_pred eeEEEecCCCCCccCChhhhcccccccccccccccCCCCCCCCCCCCcceEeecccccCCCCCccccCCCccceeeeccc
Q 003385 418 ITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNN 497 (824)
Q Consensus 418 L~~L~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~L~~L~l~~N 497 (824)
|++|+|++|++++ + +.+..+++|+.|+|++|++++. +.+..+++|+.|+|++|++++..|..++++++|+.|+|++|
T Consensus 245 L~~L~l~~n~l~~-~-~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n 321 (347)
T 4fmz_A 245 LTWLEIGTNQISD-I-NAVKDLTKLKMLNVGSNQISDI-SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQN 321 (347)
T ss_dssp CCEEECCSSCCCC-C-GGGTTCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSS
T ss_pred CCEEECCCCccCC-C-hhHhcCCCcCEEEccCCccCCC-hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCC
Confidence 8899999988884 4 4688888999999999988886 56888888999999999988778888888899999999999
Q ss_pred cccccccccccccceeccccCCc
Q 003385 498 MLSGTVPSSLLSKNVVLNYAGNI 520 (824)
Q Consensus 498 ~l~g~ip~~l~~~~~~l~~~~n~ 520 (824)
++++..|-.-+..+..+.+++|+
T Consensus 322 ~l~~~~~~~~l~~L~~L~l~~N~ 344 (347)
T 4fmz_A 322 HITDIRPLASLSKMDSADFANQV 344 (347)
T ss_dssp SCCCCGGGGGCTTCSEESSSCC-
T ss_pred ccccccChhhhhccceeehhhhc
Confidence 98866664445566677777774
No 345
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.35 E-value=1.4e-12 Score=139.61 Aligned_cols=146 Identities=21% Similarity=0.222 Sum_probs=121.2
Q ss_pred cccceeeecccccCCCCCCcccchhhhceeccCCCCCCcHHHHHHHHHhcCCCCcccCCCCCCCCCCCCeeEcCCCCCCc
Q 003385 338 SLPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPS 417 (824)
Q Consensus 338 ~l~~l~~L~L~~n~~s~LPP~i~~le~l~~L~l~~n~~~~~~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~c~~~~~~~ 417 (824)
.++.|+.|+++.|.++.+|. +..++.|+.|+++.|.+.. ..+ ...+++
T Consensus 44 ~l~~L~~L~l~~~~i~~~~~-~~~l~~L~~L~L~~n~l~~-------------------~~~------------l~~l~~ 91 (291)
T 1h6t_A 44 ELNSIDQIIANNSDIKSVQG-IQYLPNVTKLFLNGNKLTD-------------------IKP------------LANLKN 91 (291)
T ss_dssp HHHTCCEEECTTSCCCCCTT-GGGCTTCCEEECCSSCCCC-------------------CGG------------GTTCTT
T ss_pred hcCcccEEEccCCCcccChh-HhcCCCCCEEEccCCccCC-------------------Ccc------------cccCCC
Confidence 57789999999999999964 8999999999999997763 111 134679
Q ss_pred eeEEEecCCCCCccCChhhhcccccccccccccccCCCCCCCCCCCCcceEeecccccCCCCCccccCCCccceeeeccc
Q 003385 418 ITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNN 497 (824)
Q Consensus 418 L~~L~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~L~~L~l~~N 497 (824)
|+.|+|++|++++ +|. +.+|++|+.|+|++|++++. +.+..+++|+.|+|++|+|++ + +.++.+++|+.|+|++|
T Consensus 92 L~~L~l~~n~l~~-~~~-l~~l~~L~~L~L~~n~i~~~-~~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~N 166 (291)
T 1h6t_A 92 LGWLFLDENKVKD-LSS-LKDLKKLKSLSLEHNGISDI-NGLVHLPQLESLYLGNNKITD-I-TVLSRLTKLDTLSLEDN 166 (291)
T ss_dssp CCEEECCSSCCCC-GGG-GTTCTTCCEEECTTSCCCCC-GGGGGCTTCCEEECCSSCCCC-C-GGGGGCTTCSEEECCSS
T ss_pred CCEEECCCCcCCC-Chh-hccCCCCCEEECCCCcCCCC-hhhcCCCCCCEEEccCCcCCc-c-hhhccCCCCCEEEccCC
Confidence 9999999999994 554 99999999999999999986 679999999999999999995 4 68999999999999999
Q ss_pred cccccccccccccceeccccCCc
Q 003385 498 MLSGTVPSSLLSKNVVLNYAGNI 520 (824)
Q Consensus 498 ~l~g~ip~~l~~~~~~l~~~~n~ 520 (824)
++++..|-.-+..+..+.+++|.
T Consensus 167 ~l~~~~~l~~l~~L~~L~L~~N~ 189 (291)
T 1h6t_A 167 QISDIVPLAGLTKLQNLYLSKNH 189 (291)
T ss_dssp CCCCCGGGTTCTTCCEEECCSSC
T ss_pred ccccchhhcCCCccCEEECCCCc
Confidence 99955453334445667777774
No 346
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.34 E-value=2.7e-13 Score=163.50 Aligned_cols=136 Identities=24% Similarity=0.164 Sum_probs=99.4
Q ss_pred eeeecccccCCCCCCcccchhhhceeccCCCCCCcHHHHHHHHHhcCCCCcccCCCCCCCCCCCCeeEcCCCCCCceeEE
Q 003385 342 VLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSITVI 421 (824)
Q Consensus 342 l~~L~L~~n~~s~LPP~i~~le~l~~L~l~~n~~~~~~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~c~~~~~~~L~~L 421 (824)
+..+++..|.+...|..+..+..|+.|+|+.|.+.. -.+ ....+++|+.|
T Consensus 203 i~~~~~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~~-------------------l~~-----------~~~~l~~L~~L 252 (727)
T 4b8c_D 203 IDEDDDIENRMVMPKDSKYDDQLWHALDLSNLQIFN-------------------ISA-----------NIFKYDFLTRL 252 (727)
T ss_dssp -------------------CCCCCCEEECTTSCCSC-------------------CCG-----------GGGGCCSCSCC
T ss_pred ccCccccccceecChhhhccCCCCcEEECCCCCCCC-------------------CCh-----------hhcCCCCCCEE
Confidence 344555566666556667788888888888776542 000 01135689999
Q ss_pred EecCCCCCccCChhhhcccccccccccccccCCCCCCCCCCCCcceEeecccccCCCCCccccCCCccceeeeccccccc
Q 003385 422 HLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNMLSG 501 (824)
Q Consensus 422 ~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~L~~L~l~~N~l~g 501 (824)
+|++|+|+ .+|..|++|++|+.|+|++|+|+.+++.|++|++|+.|+|++|+|+ .+|.+|++|++|+.|+|++|+|+|
T Consensus 253 ~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~ 330 (727)
T 4b8c_D 253 YLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLTSLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEK 330 (727)
T ss_dssp BCTTSCCS-CCCGGGGGGTTCCEEECTTSCCSSCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCS
T ss_pred EeeCCcCc-ccChhhhCCCCCCEEeCcCCcCCccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCC
Confidence 99999999 9999999999999999999999977667999999999999999998 899999999999999999999998
Q ss_pred cccccccc
Q 003385 502 TVPSSLLS 509 (824)
Q Consensus 502 ~ip~~l~~ 509 (824)
.+|..+..
T Consensus 331 ~~p~~~~~ 338 (727)
T 4b8c_D 331 QFLKILTE 338 (727)
T ss_dssp HHHHHHHH
T ss_pred CChHHHhh
Confidence 88877643
No 347
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.34 E-value=7.1e-13 Score=143.66 Aligned_cols=151 Identities=13% Similarity=0.074 Sum_probs=107.3
Q ss_pred cceeeecccccCCCCCCcccchhhhceeccCCCCCCcHHHHHHHHHhcCCCCcccCCCCCCCCCCCCeeEcCCCCCCcee
Q 003385 340 PFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSIT 419 (824)
Q Consensus 340 ~~l~~L~L~~n~~s~LPP~i~~le~l~~L~l~~n~~~~~~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~c~~~~~~~L~ 419 (824)
+.|+.|+|+.|.++.+++.. ++.|+.|+++.|.+... .+ .....+++|+
T Consensus 99 ~~L~~L~l~~n~l~~~~~~~--~~~L~~L~l~~N~l~~~-------------------~~----------~~~~~l~~L~ 147 (317)
T 3o53_A 99 PSIETLHAANNNISRVSCSR--GQGKKNIYLANNKITML-------------------RD----------LDEGCRSRVQ 147 (317)
T ss_dssp TTCCEEECCSSCCSEEEECC--CSSCEEEECCSSCCCSG-------------------GG----------BCTGGGSSEE
T ss_pred CCcCEEECCCCccCCcCccc--cCCCCEEECCCCCCCCc-------------------cc----------hhhhccCCCC
Confidence 45566666666666665542 45566666666655420 00 0112346889
Q ss_pred EEEecCCCCCccCChhhh-cccccccccccccccCCCCCCCCCCCCcceEeecccccCCCCCccccCCCccceeeecccc
Q 003385 420 VIHLSSKNLTGNIPSDLT-KLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNM 498 (824)
Q Consensus 420 ~L~L~~n~l~g~lp~~i~-~L~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~L~~L~l~~N~ 498 (824)
.|+|++|++++..|..+. .+++|+.|+|++|+|++. +....+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|+
T Consensus 148 ~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~L~~N~ 225 (317)
T 3o53_A 148 YLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KGQVVFAKLKTLDLSSNKLA-FMGPEFQSAAGVTWISLRNNK 225 (317)
T ss_dssp EEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-ECCCCCTTCCEEECCSSCCC-EECGGGGGGTTCSEEECTTSC
T ss_pred EEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-ccccccccCCEEECCCCcCC-cchhhhcccCcccEEECcCCc
Confidence 999999999877777664 788999999999998877 44445888999999999998 566678888999999999999
Q ss_pred ccccccccccc--cceeccccCCccccC
Q 003385 499 LSGTVPSSLLS--KNVVLNYAGNINLHE 524 (824)
Q Consensus 499 l~g~ip~~l~~--~~~~l~~~~n~~lc~ 524 (824)
++ .+|..+.. .+..+.+++|+..|.
T Consensus 226 l~-~l~~~~~~l~~L~~L~l~~N~~~~~ 252 (317)
T 3o53_A 226 LV-LIEKALRFSQNLEHFDLRGNGFHCG 252 (317)
T ss_dssp CC-EECTTCCCCTTCCEEECTTCCCBHH
T ss_pred cc-chhhHhhcCCCCCEEEccCCCccCc
Confidence 98 78876533 446777888877764
No 348
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.34 E-value=2.4e-12 Score=153.99 Aligned_cols=182 Identities=17% Similarity=0.106 Sum_probs=126.6
Q ss_pred cccceeeecccccCCCCCCcc-cchhhhceeccCCCCCCcHH--HHHHHHHhcCCCCcccCCCCCCCCCCCCeeEc-CCC
Q 003385 338 SLPFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGV--AIVSVISLYSSADWAQEGGDPCLPVPWSWLQC-NSD 413 (824)
Q Consensus 338 ~l~~l~~L~L~~n~~s~LPP~-i~~le~l~~L~l~~n~~~~~--~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~c-~~~ 413 (824)
.+++|+.|+|+.|.++.+++. +..+..|+.|+++.|.+... ....+..+..+.....+++. ...+.- ...
T Consensus 428 ~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~------l~~i~~~~~~ 501 (680)
T 1ziw_A 428 GLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNN------IANINDDMLE 501 (680)
T ss_dssp TCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSC------CCCCCTTTTT
T ss_pred CcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECCCCC------CCcCChhhhc
Confidence 356778888888888777665 77777777777777665310 00111111122222111100 111110 123
Q ss_pred CCCceeEEEecCCCCCccC----C----hhhhcccccccccccccccCCCCCC-CCCCCCcceEeecccccCCCCCcccc
Q 003385 414 PQPSITVIHLSSKNLTGNI----P----SDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLM 484 (824)
Q Consensus 414 ~~~~L~~L~L~~n~l~g~l----p----~~i~~L~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~g~lP~~l~ 484 (824)
.+++|+.|+|++|++++.. | ..|.+|++|+.|+|++|+|+.+++. |.++++|+.|+|++|+|++..|..|.
T Consensus 502 ~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~ 581 (680)
T 1ziw_A 502 GLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFN 581 (680)
T ss_dssp TCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTT
T ss_pred cccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhC
Confidence 5678999999999998532 2 2378999999999999999988775 89999999999999999965556788
Q ss_pred CCCccceeeeccccccccccccc----cccceeccccCCccccCCC
Q 003385 485 NLPNLRELYVQNNMLSGTVPSSL----LSKNVVLNYAGNINLHEGG 526 (824)
Q Consensus 485 ~l~~L~~L~l~~N~l~g~ip~~l----~~~~~~l~~~~n~~lc~~~ 526 (824)
++++|+.|+|++|+|++ +|+.. +..+..+.+.+|+..|.+.
T Consensus 582 ~l~~L~~L~L~~N~l~~-~~~~~~~~~~~~L~~l~l~~N~~~c~c~ 626 (680)
T 1ziw_A 582 NQVSLKSLNLQKNLITS-VEKKVFGPAFRNLTELDMRFNPFDCTCE 626 (680)
T ss_dssp TCTTCCEEECTTSCCCB-CCHHHHHHHHTTCSEEECTTCCCCBCCC
T ss_pred CCCCCCEEECCCCcCCc-cChhHhcccccccCEEEccCCCcccCCc
Confidence 99999999999999994 55543 3556788899999999874
No 349
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.33 E-value=1.3e-12 Score=156.37 Aligned_cols=155 Identities=14% Similarity=0.077 Sum_probs=86.1
Q ss_pred cceeeecccccCCCCCCcc-cchhhhceeccCCCCCCcHHHHHHHHHhcCCCCcccCCCCCCCCCCCCeeEc-CCCCCCc
Q 003385 340 PFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQC-NSDPQPS 417 (824)
Q Consensus 340 ~~l~~L~L~~n~~s~LPP~-i~~le~l~~L~l~~n~~~~~~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~c-~~~~~~~ 417 (824)
+.++.|+|+.|.++.+|+. +..++.|+.|+++.|.+.......+..+..++....+++. ...+.. ....+++
T Consensus 25 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~------l~~l~~~~~~~l~~ 98 (680)
T 1ziw_A 25 TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNE------LSQLSDKTFAFCTN 98 (680)
T ss_dssp TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSC------CCCCCTTTTTTCTT
T ss_pred CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCc------cCccChhhhccCCC
Confidence 4678899999999999986 9999999999999887765333333333333332221100 011111 1223445
Q ss_pred eeEEEecCCCCCccCChhhhcccccccccccccccCCCCCC-CCCCCCcceEeecccccCCCCCcccc--CCCccceeee
Q 003385 418 ITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLM--NLPNLRELYV 494 (824)
Q Consensus 418 L~~L~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~g~lP~~l~--~l~~L~~L~l 494 (824)
|++|+|++|++++..|..|++|++|+.|+|++|++++.+|. +.++++|+.|+|++|++++..|..++ .+++|+.|++
T Consensus 99 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L 178 (680)
T 1ziw_A 99 LTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLEL 178 (680)
T ss_dssp CSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEEC
T ss_pred CCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEEC
Confidence 55555555555544444555555555555555555555443 45555555555555555544443332 3355555555
Q ss_pred cccccc
Q 003385 495 QNNMLS 500 (824)
Q Consensus 495 ~~N~l~ 500 (824)
++|+++
T Consensus 179 ~~n~l~ 184 (680)
T 1ziw_A 179 SSNQIK 184 (680)
T ss_dssp TTCCCC
T ss_pred CCCccc
Confidence 555555
No 350
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.33 E-value=1.7e-12 Score=159.47 Aligned_cols=140 Identities=19% Similarity=0.163 Sum_probs=88.9
Q ss_pred ccceeeecccccCCCCCCcc-cchhhhceeccCCCCCCcH-HHHHHHHHhcCCCCcccCCCCCCCCCCCCeeEcCCCCCC
Q 003385 339 LPFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDG-VAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQP 416 (824)
Q Consensus 339 l~~l~~L~L~~n~~s~LPP~-i~~le~l~~L~l~~n~~~~-~~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~c~~~~~~ 416 (824)
.++|+.|+|+.|.++.++|. +..++.|+.|+++.|.... +...+ ..+++
T Consensus 23 p~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~-----------------------------f~~L~ 73 (844)
T 3j0a_A 23 LNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEA-----------------------------FRNLP 73 (844)
T ss_dssp CTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTT-----------------------------TSSCT
T ss_pred CCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHH-----------------------------hcCCC
Confidence 45788999999999998654 9999999999998873221 00001 12345
Q ss_pred ceeEEEecCCCCCccCChhhhcccccccccccccccCCCCC-C--CCCCCCcceEeecccccCCCCC-ccccCCCcccee
Q 003385 417 SITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIP-D--FSGCPDLRIIHLEDNQLTGPLP-SSLMNLPNLREL 492 (824)
Q Consensus 417 ~L~~L~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~p-~--~~~l~~L~~L~L~~N~l~g~lP-~~l~~l~~L~~L 492 (824)
+|++|+|++|++++..|..|++|++|+.|+|++|++++.+| . +.+|++|+.|+|++|++++..| ..|++|++|+.|
T Consensus 74 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L 153 (844)
T 3j0a_A 74 NLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSI 153 (844)
T ss_dssp TCCEEECTTCCCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEE
T ss_pred CCCEEECCCCcCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEE
Confidence 66666666666665556666666666666666666665333 2 5666666666666666665433 456666666666
Q ss_pred eeccccccccccccc
Q 003385 493 YVQNNMLSGTVPSSL 507 (824)
Q Consensus 493 ~l~~N~l~g~ip~~l 507 (824)
+|++|.+++..|..+
T Consensus 154 ~Ls~N~i~~~~~~~l 168 (844)
T 3j0a_A 154 DFSSNQIFLVCEHEL 168 (844)
T ss_dssp EEESSCCCCCCSGGG
T ss_pred ECCCCcCCeeCHHHc
Confidence 666666665444443
No 351
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.33 E-value=1e-12 Score=129.64 Aligned_cols=131 Identities=15% Similarity=0.057 Sum_probs=108.2
Q ss_pred ccccceeeecccccCCCCCCcccchhh-hceeccCCCCCCcHHHHHHHHHhcCCCCcccCCCCCCCCCCCCeeEcCCCCC
Q 003385 337 LSLPFVLSFKFGKTYDSSRGPLLNAME-INKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQ 415 (824)
Q Consensus 337 ~~l~~l~~L~L~~n~~s~LPP~i~~le-~l~~L~l~~n~~~~~~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~c~~~~~ 415 (824)
..++.|+.|+|++|.++.+|. +..+. .|+.|+++.|.+.. .. ....+
T Consensus 16 ~~~~~L~~L~l~~n~l~~i~~-~~~~~~~L~~L~Ls~N~l~~-----------~~--------------------~l~~l 63 (176)
T 1a9n_A 16 TNAVRDRELDLRGYKIPVIEN-LGATLDQFDAIDFSDNEIRK-----------LD--------------------GFPLL 63 (176)
T ss_dssp ECTTSCEEEECTTSCCCSCCC-GGGGTTCCSEEECCSSCCCE-----------EC--------------------CCCCC
T ss_pred CCcCCceEEEeeCCCCchhHH-hhhcCCCCCEEECCCCCCCc-----------cc--------------------ccccC
Confidence 346788999999999999965 55554 99999999998763 00 11345
Q ss_pred CceeEEEecCCCCCccCChhhhcccccccccccccccCCCCC--CCCCCCCcceEeecccccCCCCCcc----ccCCCcc
Q 003385 416 PSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIP--DFSGCPDLRIIHLEDNQLTGPLPSS----LMNLPNL 489 (824)
Q Consensus 416 ~~L~~L~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~p--~~~~l~~L~~L~L~~N~l~g~lP~~----l~~l~~L 489 (824)
++|+.|+|++|+|++..|..+..+++|+.|+|++|+|+..++ .+..+++|+.|+|++|+++ .+|.. ++.+++|
T Consensus 64 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L 142 (176)
T 1a9n_A 64 RRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQV 142 (176)
T ss_dssp SSCCEEECCSSCCCEECSCHHHHCTTCCEEECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTC
T ss_pred CCCCEEECCCCcccccCcchhhcCCCCCEEECCCCcCCcchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCcc
Confidence 789999999999995434455999999999999999988776 6889999999999999999 67775 9999999
Q ss_pred ceeeecccccc
Q 003385 490 RELYVQNNMLS 500 (824)
Q Consensus 490 ~~L~l~~N~l~ 500 (824)
+.|++++|.+.
T Consensus 143 ~~Ld~~~n~~~ 153 (176)
T 1a9n_A 143 RVLDFQKVKLK 153 (176)
T ss_dssp SEETTEECCHH
T ss_pred ceeCCCcCCHH
Confidence 99999999887
No 352
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.33 E-value=1.9e-12 Score=152.54 Aligned_cols=147 Identities=20% Similarity=0.211 Sum_probs=122.7
Q ss_pred ccccceeeecccccCCCCCCcccchhhhceeccCCCCCCcHHHHHHHHHhcCCCCcccCCCCCCCCCCCCeeEcCCCCCC
Q 003385 337 LSLPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQP 416 (824)
Q Consensus 337 ~~l~~l~~L~L~~n~~s~LPP~i~~le~l~~L~l~~n~~~~~~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~c~~~~~~ 416 (824)
..|+.|+.|+|+.|.++.+| .|..++.|+.|+|+.|.+.. ..| ...++
T Consensus 40 ~~L~~L~~L~l~~n~i~~l~-~l~~l~~L~~L~Ls~N~l~~-------------------~~~------------l~~l~ 87 (605)
T 1m9s_A 40 NELNSIDQIIANNSDIKSVQ-GIQYLPNVTKLFLNGNKLTD-------------------IKP------------LTNLK 87 (605)
T ss_dssp HHHTTCCCCBCTTCCCCCCT-TGGGCTTCCEEECTTSCCCC-------------------CGG------------GGGCT
T ss_pred hcCCCCCEEECcCCCCCCCh-HHccCCCCCEEEeeCCCCCC-------------------Chh------------hccCC
Confidence 35778899999999999997 58999999999999987663 111 12467
Q ss_pred ceeEEEecCCCCCccCChhhhcccccccccccccccCCCCCCCCCCCCcceEeecccccCCCCCccccCCCccceeeecc
Q 003385 417 SITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQN 496 (824)
Q Consensus 417 ~L~~L~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~L~~L~l~~ 496 (824)
+|+.|+|++|+|+ .+| .+..|++|+.|+|++|+|+++ +.+..|++|+.|+|++|+|++ + ..++.|++|+.|+|++
T Consensus 88 ~L~~L~Ls~N~l~-~l~-~l~~l~~L~~L~Ls~N~l~~l-~~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~ 162 (605)
T 1m9s_A 88 NLGWLFLDENKIK-DLS-SLKDLKKLKSLSLEHNGISDI-NGLVHLPQLESLYLGNNKITD-I-TVLSRLTKLDTLSLED 162 (605)
T ss_dssp TCCEEECCSSCCC-CCT-TSTTCTTCCEEECTTSCCCCC-GGGGGCTTCSEEECCSSCCCC-C-GGGGSCTTCSEEECCS
T ss_pred CCCEEECcCCCCC-CCh-hhccCCCCCEEEecCCCCCCC-ccccCCCccCEEECCCCccCC-c-hhhcccCCCCEEECcC
Confidence 9999999999999 455 799999999999999999985 669999999999999999995 4 6899999999999999
Q ss_pred ccccccccccccccceeccccCCc
Q 003385 497 NMLSGTVPSSLLSKNVVLNYAGNI 520 (824)
Q Consensus 497 N~l~g~ip~~l~~~~~~l~~~~n~ 520 (824)
|+|++..|-.-+..+..|.+++|.
T Consensus 163 N~l~~~~~l~~l~~L~~L~Ls~N~ 186 (605)
T 1m9s_A 163 NQISDIVPLAGLTKLQNLYLSKNH 186 (605)
T ss_dssp SCCCCCGGGTTCTTCCEEECCSSC
T ss_pred CcCCCchhhccCCCCCEEECcCCC
Confidence 999976664445556677777774
No 353
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.32 E-value=2.3e-12 Score=150.54 Aligned_cols=138 Identities=14% Similarity=0.149 Sum_probs=115.4
Q ss_pred cceeeecccccCCCCCCcc-cchhhhceeccCCCCCCcHHHHHHHHHhcCCCCcccCCCCCCCCCCCCeeEcCCCCCCce
Q 003385 340 PFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 418 (824)
Q Consensus 340 ~~l~~L~L~~n~~s~LPP~-i~~le~l~~L~l~~n~~~~~~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~c~~~~~~~L 418 (824)
+.++.|+|+.|.++.+++. +..++.|+.|+++.|.+... .+- ....+++|
T Consensus 28 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i-------------------~~~----------~~~~l~~L 78 (570)
T 2z63_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTI-------------------EDG----------AYQSLSHL 78 (570)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEE-------------------CTT----------TTTTCTTC
T ss_pred ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCcc-------------------Ccc----------cccCchhC
Confidence 3678999999999999885 99999999999999876531 000 01345789
Q ss_pred eEEEecCCCCCccCChhhhcccccccccccccccCCCCC-CCCCCCCcceEeecccccCC-CCCccccCCCccceeeecc
Q 003385 419 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIP-DFSGCPDLRIIHLEDNQLTG-PLPSSLMNLPNLRELYVQN 496 (824)
Q Consensus 419 ~~L~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~N~l~g-~lP~~l~~l~~L~~L~l~~ 496 (824)
++|+|++|++++..|..|++|++|+.|+|++|++++.++ .++++++|++|+|++|++++ .+|..|++|++|+.|++++
T Consensus 79 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~ 158 (570)
T 2z63_A 79 STLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSS 158 (570)
T ss_dssp CEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTT
T ss_pred CEEeCcCCcCCccCHhhhcCccccccccccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcC
Confidence 999999999997777899999999999999999999887 48999999999999999986 4799999999999999999
Q ss_pred cccccccccc
Q 003385 497 NMLSGTVPSS 506 (824)
Q Consensus 497 N~l~g~ip~~ 506 (824)
|++++..|..
T Consensus 159 n~l~~~~~~~ 168 (570)
T 2z63_A 159 NKIQSIYCTD 168 (570)
T ss_dssp SCCCEECGGG
T ss_pred CccceecHHH
Confidence 9999444443
No 354
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.32 E-value=2.4e-12 Score=140.00 Aligned_cols=168 Identities=16% Similarity=0.148 Sum_probs=89.0
Q ss_pred ceeeecccccCCCCCCc-ccchhhhceeccCCCCCCcHHHHHHHHHhcCCCCcccCCCCCCCCCCCCeeEcCCCCCCcee
Q 003385 341 FVLSFKFGKTYDSSRGP-LLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSIT 419 (824)
Q Consensus 341 ~l~~L~L~~n~~s~LPP-~i~~le~l~~L~l~~n~~~~~~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~c~~~~~~~L~ 419 (824)
.++.|+|+.|.++.+|+ .+..++.|+.|+++.|.+.......+..+..++....+.+. ...++. .-.++|+
T Consensus 53 ~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~------l~~l~~--~~~~~L~ 124 (330)
T 1xku_A 53 DTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQ------LKELPE--KMPKTLQ 124 (330)
T ss_dssp TCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSC------CSBCCS--SCCTTCC
T ss_pred CCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCc------CCccCh--hhccccc
Confidence 45667777777777776 37777777777777766553211112222112211111000 000000 0113566
Q ss_pred EEEecCCCCCccCChhhhcccccccccccccccCC--CCCC-CCCCCCcceEeecccccCCCCCccccCCCccceeeecc
Q 003385 420 VIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTG--PIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQN 496 (824)
Q Consensus 420 ~L~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~--~~p~-~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~L~~L~l~~ 496 (824)
+|+|++|++++..+..+.++++|+.|+|++|+++. ..+. +.++++|+.|+|++|+++ .+|..+. ++|+.|+|++
T Consensus 125 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~-~l~~~~~--~~L~~L~l~~ 201 (330)
T 1xku_A 125 ELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGLP--PSLTELHLDG 201 (330)
T ss_dssp EEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-SCCSSCC--TTCSEEECTT
T ss_pred EEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc-cCCcccc--ccCCEEECCC
Confidence 66666666665555556666666666666666653 3333 666666666666666666 4555543 5666666666
Q ss_pred cccccccccccc--ccceeccccCC
Q 003385 497 NMLSGTVPSSLL--SKNVVLNYAGN 519 (824)
Q Consensus 497 N~l~g~ip~~l~--~~~~~l~~~~n 519 (824)
|++++..|..+. ..+..+.+++|
T Consensus 202 n~l~~~~~~~~~~l~~L~~L~Ls~n 226 (330)
T 1xku_A 202 NKITKVDAASLKGLNNLAKLGLSFN 226 (330)
T ss_dssp SCCCEECTGGGTTCTTCCEEECCSS
T ss_pred CcCCccCHHHhcCCCCCCEEECCCC
Confidence 666633333332 12344455555
No 355
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.32 E-value=1.6e-12 Score=151.42 Aligned_cols=139 Identities=20% Similarity=0.143 Sum_probs=85.2
Q ss_pred cceeeecccccCCCCCCcc-cchhhhceeccCCCCCCcHHHHHHHHHhcCCCCcccCCCCCCCCCCCCeeEcCCCCCCce
Q 003385 340 PFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 418 (824)
Q Consensus 340 ~~l~~L~L~~n~~s~LPP~-i~~le~l~~L~l~~n~~~~~~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~c~~~~~~~L 418 (824)
+.|+.|+|+.|.++.++|. +..++.|+.|+++.|.+.......+ ..+++|
T Consensus 26 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~-----------------------------~~l~~L 76 (549)
T 2z81_A 26 AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAF-----------------------------YSLGSL 76 (549)
T ss_dssp TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTT-----------------------------TTCTTC
T ss_pred CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhc-----------------------------cccccC
Confidence 4678888888888888664 8888888888888887653111111 234456
Q ss_pred eEEEecCCCCCccCChhhhcccccccccccccccCCC--CCCCCCCCCcceEeecccccCCCCC-ccccCCCccceeeec
Q 003385 419 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGP--IPDFSGCPDLRIIHLEDNQLTGPLP-SSLMNLPNLRELYVQ 495 (824)
Q Consensus 419 ~~L~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~--~p~~~~l~~L~~L~L~~N~l~g~lP-~~l~~l~~L~~L~l~ 495 (824)
++|+|++|++++..|..|++|++|+.|+|++|++++. ++.+.++++|+.|+|++|++.+.+| ..++++++|++|+++
T Consensus 77 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~ 156 (549)
T 2z81_A 77 EHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIK 156 (549)
T ss_dssp CEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEE
T ss_pred CEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeecc
Confidence 6666666666644444566666666666666666642 2335666666666666666433444 356666666666666
Q ss_pred cccccccccccc
Q 003385 496 NNMLSGTVPSSL 507 (824)
Q Consensus 496 ~N~l~g~ip~~l 507 (824)
+|++++.+|..+
T Consensus 157 ~n~l~~~~~~~l 168 (549)
T 2z81_A 157 ALSLRNYQSQSL 168 (549)
T ss_dssp ETTCCEECTTTT
T ss_pred CCcccccChhhh
Confidence 666665555444
No 356
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.31 E-value=1.5e-12 Score=150.59 Aligned_cols=87 Identities=21% Similarity=0.301 Sum_probs=42.8
Q ss_pred CCceeEEEecCCCCCccCChhhhcccccccccccccccCCC-CC-CCCCCCCcceEeecccccCCCCCccccCCCcc--c
Q 003385 415 QPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGP-IP-DFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNL--R 490 (824)
Q Consensus 415 ~~~L~~L~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~-~p-~~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~L--~ 490 (824)
+++|++|+|++|+|+ .+|.. .+++|++|+|++|++++. +| .++++++|+.|+|++|+|++ ..++.+++| +
T Consensus 68 l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~ 141 (520)
T 2z7x_B 68 NQELEYLDLSHNKLV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNIS 141 (520)
T ss_dssp CTTCCEEECCSSCCC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEE
T ss_pred ccCCCEEecCCCcee-ecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceee
Confidence 345555555555555 44443 455555555555555542 22 35555555555555555543 234444444 5
Q ss_pred eeeeccccc--cccccccc
Q 003385 491 ELYVQNNML--SGTVPSSL 507 (824)
Q Consensus 491 ~L~l~~N~l--~g~ip~~l 507 (824)
.|++++|++ .+.+|..+
T Consensus 142 ~L~l~~n~l~~~~~~~~~l 160 (520)
T 2z7x_B 142 KVLLVLGETYGEKEDPEGL 160 (520)
T ss_dssp EEEEEECTTTTSSCCTTTT
T ss_pred EEEeecccccccccccccc
Confidence 555555555 44444443
No 357
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.30 E-value=2.6e-12 Score=126.26 Aligned_cols=106 Identities=24% Similarity=0.298 Sum_probs=92.3
Q ss_pred ceeEEEecCCCCCccCChhhhcccccccccccccccCCCCCC-CCCCCCcceEeecccccCCCCCccccCCCccceeeec
Q 003385 417 SITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQ 495 (824)
Q Consensus 417 ~L~~L~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~L~~L~l~ 495 (824)
+.+.|++++|+|+ .+|..+. ++|+.|+|++|+|++++|. |.++++|+.|+|++|+|++..|..|.++++|+.|+|+
T Consensus 10 ~~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~ 86 (170)
T 3g39_A 10 SGTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLN 86 (170)
T ss_dssp ETTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECC
Confidence 4578999999999 7998774 8999999999999999886 8999999999999999997666678999999999999
Q ss_pred cccccccccccccc---cceeccccCCccccCCC
Q 003385 496 NNMLSGTVPSSLLS---KNVVLNYAGNINLHEGG 526 (824)
Q Consensus 496 ~N~l~g~ip~~l~~---~~~~l~~~~n~~lc~~~ 526 (824)
+|+|+ .+|...+. .+..+.+++|+..|.+.
T Consensus 87 ~N~l~-~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 87 DNQLK-SIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp SSCCC-CCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred CCccC-EeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 99999 67776544 44678889999888763
No 358
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.30 E-value=4.9e-13 Score=153.87 Aligned_cols=178 Identities=13% Similarity=-0.000 Sum_probs=115.4
Q ss_pred cccceeeecccccCCCCCCc-ccchhhhceeccCCCCCCcHHHHHHHHHhcCCCCcccCCCCCCC---CCCCCeeEcCCC
Q 003385 338 SLPFVLSFKFGKTYDSSRGP-LLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCL---PVPWSWLQCNSD 413 (824)
Q Consensus 338 ~l~~l~~L~L~~n~~s~LPP-~i~~le~l~~L~l~~n~~~~~~l~~lk~~~~~~~w~~~~~dpc~---~~~~~~~~c~~~ 413 (824)
..++|+.|+|+.|.++.+|| .|..+..|+.|+++.|.+..... +..+..+..+..+++.-.. ......+..+..
T Consensus 32 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~~~~L~~L~L~~N 109 (487)
T 3oja_A 32 SAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLVGPSIETLHAANN 109 (487)
T ss_dssp TGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEECTTCCEEECCSS
T ss_pred cCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCCCCCcCEEECcCC
Confidence 34589999999999999987 49999999999999998764111 3333333333221110000 001122222211
Q ss_pred C--------CCceeEEEecCCCCCccCChhhhcccccccccccccccCCCCCC-CC-CCCCcceEeecccccCCCCCccc
Q 003385 414 P--------QPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FS-GCPDLRIIHLEDNQLTGPLPSSL 483 (824)
Q Consensus 414 ~--------~~~L~~L~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~p~-~~-~l~~L~~L~L~~N~l~g~lP~~l 483 (824)
. +++|+.|+|++|+|++..|..++++++|+.|+|++|+|++.+|. +. .+++|+.|+|++|+|++. |. +
T Consensus 110 ~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~-~~-~ 187 (487)
T 3oja_A 110 NISRVSCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-Q 187 (487)
T ss_dssp CCCCEEECCCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-C
T ss_pred cCCCCCccccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc-cc-c
Confidence 1 35677778888888877777788888888888888888876664 54 678888888888888744 32 4
Q ss_pred cCCCccceeeecccccccccccccc--ccceeccccCCc
Q 003385 484 MNLPNLRELYVQNNMLSGTVPSSLL--SKNVVLNYAGNI 520 (824)
Q Consensus 484 ~~l~~L~~L~l~~N~l~g~ip~~l~--~~~~~l~~~~n~ 520 (824)
..+++|+.|+|++|.|+ .+|+.+. ..+..+.+++|.
T Consensus 188 ~~l~~L~~L~Ls~N~l~-~~~~~~~~l~~L~~L~Ls~N~ 225 (487)
T 3oja_A 188 VVFAKLKTLDLSSNKLA-FMGPEFQSAAGVTWISLRNNK 225 (487)
T ss_dssp CCCTTCCEEECCSSCCC-EECGGGGGGTTCSEEECTTSC
T ss_pred ccCCCCCEEECCCCCCC-CCCHhHcCCCCccEEEecCCc
Confidence 45778888888888888 4555543 234556666664
No 359
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.29 E-value=1.3e-12 Score=152.54 Aligned_cols=147 Identities=18% Similarity=0.145 Sum_probs=103.3
Q ss_pred ccceeeecccccCCCCCCcccchhhhceeccCCCCCCcHHHHHHHHHhcCCCCcccCCCCCCCCCCCCeeEcCCCCCCce
Q 003385 339 LPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 418 (824)
Q Consensus 339 l~~l~~L~L~~n~~s~LPP~i~~le~l~~L~l~~n~~~~~~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~c~~~~~~~L 418 (824)
+++|+.|+|++|.++.+|+ +.. .|+.|++++|.+..... .+..+..+..+++. ..+++. .+++|
T Consensus 99 l~~L~~L~Ls~N~l~~ip~-l~~--~L~~L~Ls~N~l~~lp~----~l~~L~~L~Ls~N~------l~~lp~---~l~~L 162 (571)
T 3cvr_A 99 PASLEYLDACDNRLSTLPE-LPA--SLKHLDVDNNQLTMLPE----LPALLEYINADNNQ------LTMLPE---LPTSL 162 (571)
T ss_dssp CTTCCEEECCSSCCSCCCC-CCT--TCCEEECCSSCCSCCCC----CCTTCCEEECCSSC------CSCCCC---CCTTC
T ss_pred cCCCCEEEccCCCCCCcch-hhc--CCCEEECCCCcCCCCCC----cCccccEEeCCCCc------cCcCCC---cCCCc
Confidence 4677888888888888888 665 78888888887664111 11122222211110 111221 35688
Q ss_pred eEEEecCCCCCccCChhhhcccccccccccccccCCCCCCCCCCCCc-------ceEeecccccCCCCCccccCCCccce
Q 003385 419 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDL-------RIIHLEDNQLTGPLPSSLMNLPNLRE 491 (824)
Q Consensus 419 ~~L~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~p~~~~l~~L-------~~L~L~~N~l~g~lP~~l~~l~~L~~ 491 (824)
+.|+|++|+|++ +|. |. ++|+.|+|++|+|+.+++ +.+ +| +.|+|++|+|+ .+|..++++++|+.
T Consensus 163 ~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~ 234 (571)
T 3cvr_A 163 EVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLESLPA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCT 234 (571)
T ss_dssp CEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCSSCCC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEE
T ss_pred CEEECCCCCCCC-cch-hh--CCCCEEECcCCCCCchhh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCE
Confidence 999999999985 777 66 889999999999986666 554 66 89999999998 78888888999999
Q ss_pred eeeccccccccccccccc
Q 003385 492 LYVQNNMLSGTVPSSLLS 509 (824)
Q Consensus 492 L~l~~N~l~g~ip~~l~~ 509 (824)
|+|++|+|+|.+|..+..
T Consensus 235 L~L~~N~l~~~~p~~l~~ 252 (571)
T 3cvr_A 235 IILEDNPLSSRIRESLSQ 252 (571)
T ss_dssp EECCSSSCCHHHHHHHHH
T ss_pred EEeeCCcCCCcCHHHHHH
Confidence 999999998888877644
No 360
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.29 E-value=6.2e-13 Score=144.10 Aligned_cols=139 Identities=18% Similarity=0.180 Sum_probs=114.5
Q ss_pred ccceeeecccccCCCCCCcc-cchhhhceeccCCCCCCcHHHHHHHHHhcCCCCcccCCCCCCCCCCCCeeEcCCCCCCc
Q 003385 339 LPFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPS 417 (824)
Q Consensus 339 l~~l~~L~L~~n~~s~LPP~-i~~le~l~~L~l~~n~~~~~~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~c~~~~~~~ 417 (824)
+++|+.|+|+.|.++.++|. +..+..|+.|+++.|.+..... ..+ ...+++
T Consensus 119 ~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~---------~~~-------------------~~~l~~ 170 (317)
T 3o53_A 119 GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNF---------AEL-------------------AASSDT 170 (317)
T ss_dssp CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEG---------GGG-------------------GGGTTT
T ss_pred cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccH---------HHH-------------------hhccCc
Confidence 57799999999999999885 8999999999999998764100 000 013468
Q ss_pred eeEEEecCCCCCccCChhhhcccccccccccccccCCCCCCCCCCCCcceEeecccccCCCCCccccCCCccceeeeccc
Q 003385 418 ITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNN 497 (824)
Q Consensus 418 L~~L~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~L~~L~l~~N 497 (824)
|++|+|++|++++ +|. ...+++|+.|+|++|+|++.++.+..+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|
T Consensus 171 L~~L~L~~N~l~~-~~~-~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N 247 (317)
T 3o53_A 171 LEHLNLQYNFIYD-VKG-QVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGN 247 (317)
T ss_dssp CCEEECTTSCCCE-EEC-CCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTC
T ss_pred CCEEECCCCcCcc-ccc-ccccccCCEEECCCCcCCcchhhhcccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCC
Confidence 9999999999994 444 44599999999999999998888999999999999999999 78989999999999999999
Q ss_pred ccc-cccccccc
Q 003385 498 MLS-GTVPSSLL 508 (824)
Q Consensus 498 ~l~-g~ip~~l~ 508 (824)
++. +.+|..+.
T Consensus 248 ~~~~~~~~~~~~ 259 (317)
T 3o53_A 248 GFHCGTLRDFFS 259 (317)
T ss_dssp CCBHHHHHHHHH
T ss_pred CccCcCHHHHHh
Confidence 998 66665543
No 361
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.28 E-value=5.8e-12 Score=143.68 Aligned_cols=158 Identities=18% Similarity=0.182 Sum_probs=93.0
Q ss_pred ccceeeecccccCCCCCCcccchhhhceeccCCCCCCcHHHHHHHHHhcCCCCcccCCCCCCCCCCCCeeEcCCCCCCce
Q 003385 339 LPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 418 (824)
Q Consensus 339 l~~l~~L~L~~n~~s~LPP~i~~le~l~~L~l~~n~~~~~~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~c~~~~~~~L 418 (824)
++.|+.|+|+.|.++.+| +..++.|+.|+++.|.+.... +..+..+..+....+... ..+ ....+++|
T Consensus 105 l~~L~~L~L~~N~l~~l~--~~~l~~L~~L~l~~N~l~~l~---l~~l~~L~~L~l~~n~~~-----~~~--~~~~l~~L 172 (457)
T 3bz5_A 105 LTKLTYLNCDTNKLTKLD--VSQNPLLTYLNCARNTLTEID---VSHNTQLTELDCHLNKKI-----TKL--DVTPQTQL 172 (457)
T ss_dssp CTTCCEEECCSSCCSCCC--CTTCTTCCEEECTTSCCSCCC---CTTCTTCCEEECTTCSCC-----CCC--CCTTCTTC
T ss_pred CCcCCEEECCCCcCCeec--CCCCCcCCEEECCCCccceec---cccCCcCCEEECCCCCcc-----ccc--ccccCCcC
Confidence 445555566666655553 555555666666555544321 111111111111100000 000 12345678
Q ss_pred eEEEecCCCCCccCChhhhcccccccccccccccCCCCCCCCCCCCcceEeecccccCCCCCccccCCCccceeeecccc
Q 003385 419 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNM 498 (824)
Q Consensus 419 ~~L~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~L~~L~l~~N~ 498 (824)
+.|+|++|++++ +| ++.+++|+.|+|++|++++. ++..+++|+.|+|++|+|++ +| ++.+++|+.|++++|+
T Consensus 173 ~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~--~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~ 244 (457)
T 3bz5_A 173 TTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL--DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNP 244 (457)
T ss_dssp CEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC--CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSC
T ss_pred CEEECCCCccce-ec--cccCCCCCEEECcCCcCCee--ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCc
Confidence 888888888874 55 77778888888888888776 37777888888888888885 66 7778888888888888
Q ss_pred ccccccccccccceecccc
Q 003385 499 LSGTVPSSLLSKNVVLNYA 517 (824)
Q Consensus 499 l~g~ip~~l~~~~~~l~~~ 517 (824)
+++ +|...+..+..+.+.
T Consensus 245 l~~-~~~~~l~~L~~L~l~ 262 (457)
T 3bz5_A 245 LTE-LDVSTLSKLTTLHCI 262 (457)
T ss_dssp CSC-CCCTTCTTCCEEECT
T ss_pred CCC-cCHHHCCCCCEEecc
Confidence 883 555445444444333
No 362
>2jwp_A Malectin, MGC80075; sugar binding, sugar binding protein; NMR {Xenopus laevis} PDB: 2k46_A* 2kr2_A*
Probab=99.28 E-value=1.6e-11 Score=121.06 Aligned_cols=139 Identities=17% Similarity=0.213 Sum_probs=95.4
Q ss_pred eEeecCCCCCcccCCCeEEecCCccc-cCceeeee----cCc---ccccccceeeeecCCCCcceeeecccCCceeEEEE
Q 003385 33 VSLNCGGNENFTDEIGLQWIADDHLI-YGEISNIS----VAN---ETRKQYMTLRHFPADSRKYCYKLDVITRTRYLIRA 104 (824)
Q Consensus 33 ~~idcg~~~~~~~~~~~~~~~d~~~~-~~~~~~~~----~~~---~~~~~~~tlr~fp~~~~~~cy~~~~~~~~~ylvr~ 104 (824)
+.||||++.. +|..+++|.+|..|. .|..+... ... ...+.|+|-|.||. +.+|.+|+.++|+|+||.
T Consensus 8 ~~INcGg~~~-~d~~gr~w~~D~~~~~~g~~~~~~~~~~~~~~~~~~~~lY~TaR~~~~---~~tY~f~v~~~G~Y~VrL 83 (174)
T 2jwp_A 8 WAVNAGGESH-VDVHGIHYRKDPLEGRVGRASDYGMKLPILRSNPEDQVLYQTERYNED---SFGYDIPIKEEGEYVLVL 83 (174)
T ss_dssp EEEEETSSSE-EETTTEEECSSCSSTTCCCCCCCCTTSCCSSSCHHHHHTTTCCCCCCS---CEEEEEECCSCEEEEEEE
T ss_pred EEEECCCCCc-cCCCCCEEcCCcCcccCCcccccccceEecccCCCCchhhhhhccCCC---CeEEEEEeCCCeEEEEEE
Confidence 4799998864 567899999998886 34322111 110 11246899999995 579999999999999999
Q ss_pred EeeecccCCCCCCCceeEEeCCcee-eeEeeC---CcCcceEEEEEEEe-------------cCCCceEEEeccCCCCce
Q 003385 105 TFLYGNFDNNNVYPKFDISLGPTHW-STIVIS---DAATIEVRELIFLA-------------SSPKIDVCLSNATTGQPF 167 (824)
Q Consensus 105 ~~~yg~~d~~~~~p~fd~~~~~~~w-~~v~~~---~~~~~~~~e~~~~~-------------~~~~~~vcl~~~~~~~pf 167 (824)
.|.--.|.+ ....+||++|+|..- .-.+.. ....+.+.|..+.+ .+..+.|.|.....+.||
T Consensus 84 hF~ei~~~~-~~~rvFdV~ing~~~l~~fdi~~~ag~~~~~~~~~~~~v~~~~l~i~~~~~~~~g~L~I~f~p~~~~~a~ 162 (174)
T 2jwp_A 84 KFAEVYFAQ-SQQKVFDVRVNGHTVVKDLDIFDRVGHSTAHDEIIPISIKKGKLSVQGEVSTFTGKLSVEFVKGYYDNPK 162 (174)
T ss_dssp EEECCSCCC-SSSSCEEEEETTEEEEEEECHHHHHSSSSCEEEEEEEEEETTEEEETTEEEECCSEEEEEEECSSSCSSS
T ss_pred EEeccccCC-CCCeEeEEEECCEEeecCcCHHHhhCCCeeEEEEEEEEEecCceeeeeeecccCCeEEEEEeccCCCCcE
Confidence 998776653 456799999999532 122221 12234455555542 455688888864456799
Q ss_pred eeeeeeeec
Q 003385 168 ISTLELRQF 176 (824)
Q Consensus 168 is~le~~~l 176 (824)
||+||+.+-
T Consensus 163 inaIEI~~~ 171 (174)
T 2jwp_A 163 VCALFIMKG 171 (174)
T ss_dssp EEEEEEESS
T ss_pred EEEEEEEeC
Confidence 999999863
No 363
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.28 E-value=1.2e-12 Score=138.00 Aligned_cols=169 Identities=17% Similarity=0.207 Sum_probs=100.5
Q ss_pred ccccceeeecccccCCCCCCcccchhhhceeccCCCCCCcHHHHHHHHHhcCCCCcccCCCCCCCCCCCCeeEcCCCCCC
Q 003385 337 LSLPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQP 416 (824)
Q Consensus 337 ~~l~~l~~L~L~~n~~s~LPP~i~~le~l~~L~l~~n~~~~~~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~c~~~~~~ 416 (824)
..+..+..++|+++.++.++ .+..++.|+.|++++|.+.... .+..+..+..+..+++. ...+.. ...++
T Consensus 16 ~~l~~l~~l~l~~~~i~~~~-~~~~l~~L~~L~l~~n~i~~l~--~l~~l~~L~~L~L~~N~------i~~~~~-l~~l~ 85 (263)
T 1xeu_A 16 PGLANAVKQNLGKQSVTDLV-SQKELSGVQNFNGDNSNIQSLA--GMQFFTNLKELHLSHNQ------ISDLSP-LKDLT 85 (263)
T ss_dssp HHHHHHHHHHHTCSCTTSEE-CHHHHTTCSEEECTTSCCCCCT--TGGGCTTCCEEECCSSC------CCCCGG-GTTCS
T ss_pred HHHHHHHHHHhcCCCccccc-chhhcCcCcEEECcCCCcccch--HHhhCCCCCEEECCCCc------cCCChh-hccCC
Confidence 35667888999999999998 6899999999999999876421 23333333333221111 111111 23455
Q ss_pred ceeEEEecCCCCCccCChhhhcccccccccccccccCCCCCCCCCCCCcceEeecccccCCCCCccccCCCccceeeecc
Q 003385 417 SITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQN 496 (824)
Q Consensus 417 ~L~~L~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~L~~L~l~~ 496 (824)
+|+.|+|++|+++ .+|.... ++|+.|+|++|+|++. +.+.++++|+.|+|++|+|++ +| .++.+++|+.|+|++
T Consensus 86 ~L~~L~L~~N~l~-~l~~~~~--~~L~~L~L~~N~l~~~-~~l~~l~~L~~L~Ls~N~i~~-~~-~l~~l~~L~~L~L~~ 159 (263)
T 1xeu_A 86 KLEELSVNRNRLK-NLNGIPS--ACLSRLFLDNNELRDT-DSLIHLKNLEILSIRNNKLKS-IV-MLGFLSKLEVLDLHG 159 (263)
T ss_dssp SCCEEECCSSCCS-CCTTCCC--SSCCEEECCSSCCSBS-GGGTTCTTCCEEECTTSCCCB-CG-GGGGCTTCCEEECTT
T ss_pred CCCEEECCCCccC-CcCcccc--CcccEEEccCCccCCC-hhhcCcccccEEECCCCcCCC-Ch-HHccCCCCCEEECCC
Confidence 6666666666666 3444222 6666666666666664 346666667777777777663 33 566666677777777
Q ss_pred ccccccccccc--cccceeccccCCcccc
Q 003385 497 NMLSGTVPSSL--LSKNVVLNYAGNINLH 523 (824)
Q Consensus 497 N~l~g~ip~~l--~~~~~~l~~~~n~~lc 523 (824)
|++++. ..+ +..+..+.+++|+..+
T Consensus 160 N~i~~~--~~l~~l~~L~~L~l~~N~~~~ 186 (263)
T 1xeu_A 160 NEITNT--GGLTRLKKVNWIDLTGQKCVN 186 (263)
T ss_dssp SCCCBC--TTSTTCCCCCEEEEEEEEEEC
T ss_pred CcCcch--HHhccCCCCCEEeCCCCcccC
Confidence 766633 222 2233445555665443
No 364
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.27 E-value=7.1e-12 Score=143.20 Aligned_cols=105 Identities=24% Similarity=0.290 Sum_probs=79.9
Q ss_pred CCCceeEEEecCCCCCccCChhhhcccccccccccccccCCCCCCCCCCCCcceEeecccccCCCCCccccCCCccceee
Q 003385 414 PQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELY 493 (824)
Q Consensus 414 ~~~~L~~L~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~L~~L~ 493 (824)
.+++|+.|+|++|++++ ++. ++.+++|+.|+|++|++++.+| +..+++|+.|+|++|++++. ..++++++|+.|+
T Consensus 285 ~l~~L~~L~L~~n~l~~-~~~-~~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~ 359 (466)
T 1o6v_A 285 GLTALTNLELNENQLED-ISP-ISNLKNLTYLTLYFNNISDISP-VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLS 359 (466)
T ss_dssp TCTTCSEEECCSSCCSC-CGG-GGGCTTCSEEECCSSCCSCCGG-GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEE
T ss_pred CCCccCeEEcCCCcccC-chh-hcCCCCCCEEECcCCcCCCchh-hccCccCCEeECCCCccCCc--hhhccCCCCCEEe
Confidence 45688888888888885 333 7888888888888888888777 77888888888888888853 4688888888888
Q ss_pred eccccccccccccccccceeccccCCcccc
Q 003385 494 VQNNMLSGTVPSSLLSKNVVLNYAGNINLH 523 (824)
Q Consensus 494 l~~N~l~g~ip~~l~~~~~~l~~~~n~~lc 523 (824)
+++|++++..|..-+..+..+.+.+|....
T Consensus 360 l~~n~l~~~~~~~~l~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 360 AGHNQISDLTPLANLTRITQLGLNDQAWTN 389 (466)
T ss_dssp CCSSCCCBCGGGTTCTTCCEEECCCEEEEC
T ss_pred CCCCccCccchhhcCCCCCEEeccCCcccC
Confidence 888888877774445555666777775443
No 365
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.26 E-value=7e-12 Score=123.71 Aligned_cols=92 Identities=23% Similarity=0.324 Sum_probs=82.9
Q ss_pred CCceeEEEecCCCCCccCChhhhcccccccccccccccCCCCCC-CCCCCCcceEeecccccCCCCCccccCCCccceee
Q 003385 415 QPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELY 493 (824)
Q Consensus 415 ~~~L~~L~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~L~~L~ 493 (824)
.++|+.|+|++|+|++..|..|.+|++|+.|+|++|+|+++++. |.++++|+.|+|++|+|++..+..|..|++|+.|+
T Consensus 32 ~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~ 111 (174)
T 2r9u_A 32 PTDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLKSIPRGAFDNLKSLTHIY 111 (174)
T ss_dssp CTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEE
T ss_pred CCCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCccceeCHHHhccccCCCEEE
Confidence 36899999999999988889999999999999999999999887 68999999999999999965555699999999999
Q ss_pred eccccccccccccc
Q 003385 494 VQNNMLSGTVPSSL 507 (824)
Q Consensus 494 l~~N~l~g~ip~~l 507 (824)
|++|++. ..|..+
T Consensus 112 L~~N~~~-c~~~~~ 124 (174)
T 2r9u_A 112 LYNNPWD-CECRDI 124 (174)
T ss_dssp CCSSCBC-TTBGGG
T ss_pred eCCCCcc-cccccH
Confidence 9999999 555543
No 366
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.24 E-value=1.2e-11 Score=144.63 Aligned_cols=133 Identities=17% Similarity=0.121 Sum_probs=72.1
Q ss_pred cceeeecccccCCCCCCc-ccchhhhceeccCCCCCCcHHHHHHHHHhcCCCCcccCCCCCCCCCCCCeeEcCCCCCCce
Q 003385 340 PFVLSFKFGKTYDSSRGP-LLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 418 (824)
Q Consensus 340 ~~l~~L~L~~n~~s~LPP-~i~~le~l~~L~l~~n~~~~~~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~c~~~~~~~L 418 (824)
+.|+.|+|+.|.++.+|| .+..++.|+.|+++.|.+.. ..|- ....+++|
T Consensus 52 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~-------------------~~~~----------~~~~l~~L 102 (562)
T 3a79_B 52 PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRS-------------------LDFH----------VFLFNQDL 102 (562)
T ss_dssp TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCE-------------------ECTT----------TTTTCTTC
T ss_pred CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCc-------------------CCHH----------HhCCCCCC
Confidence 345555555555555554 35555555555555554432 0000 01234566
Q ss_pred eEEEecCCCCCccCChhhhcccccccccccccccCCCC-C-CCCCCCCcceEeecccccCCCCCccccCCCcc--ceeee
Q 003385 419 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPI-P-DFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNL--RELYV 494 (824)
Q Consensus 419 ~~L~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~-p-~~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~L--~~L~l 494 (824)
++|+|++|+|+ .+|.. .|++|+.|+|++|++++.+ | .|+++++|+.|+|++|+|++. .++.+++| +.|+|
T Consensus 103 ~~L~Ls~N~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L 176 (562)
T 3a79_B 103 EYLDVSHNRLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILL 176 (562)
T ss_dssp CEEECTTSCCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEE
T ss_pred CEEECCCCcCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEe
Confidence 66666666666 55554 5666666666666666533 2 366666666666666666642 23333333 66666
Q ss_pred ccccc--cccccccc
Q 003385 495 QNNML--SGTVPSSL 507 (824)
Q Consensus 495 ~~N~l--~g~ip~~l 507 (824)
++|++ ++..|..+
T Consensus 177 ~~n~l~~~~~~~~~l 191 (562)
T 3a79_B 177 DLVSYHIKGGETESL 191 (562)
T ss_dssp EESSCCCCSSSCCEE
T ss_pred ecccccccccCcccc
Confidence 66666 55555444
No 367
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.24 E-value=3.6e-13 Score=149.95 Aligned_cols=181 Identities=14% Similarity=0.134 Sum_probs=133.9
Q ss_pred cccceeeecccccCCCC-----CCcccchhhhceeccCCCCCCcHHHHHHHHHh-------------cCCCCcccCCCCC
Q 003385 338 SLPFVLSFKFGKTYDSS-----RGPLLNAMEINKYLERNDGSIDGVAIVSVISL-------------YSSADWAQEGGDP 399 (824)
Q Consensus 338 ~l~~l~~L~L~~n~~s~-----LPP~i~~le~l~~L~l~~n~~~~~~l~~lk~~-------------~~~~~w~~~~~dp 399 (824)
.+++|+.|+|+.|.++. +|+.+..+..|+.|+++.|.+.......+... ..+..+..+++.
T Consensus 92 ~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~- 170 (386)
T 2ca6_A 92 KCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNR- 170 (386)
T ss_dssp TCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSC-
T ss_pred hCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCC-
Confidence 46789999999999998 88889999999999999999976555444443 345554332111
Q ss_pred CCCCCCCeeE---cCCCCCCceeEEEecCCCCC--c---cCChhhhcccccccccccccccC----CCCC-CCCCCCCcc
Q 003385 400 CLPVPWSWLQ---CNSDPQPSITVIHLSSKNLT--G---NIPSDLTKLSSLVELWLDGNSLT----GPIP-DFSGCPDLR 466 (824)
Q Consensus 400 c~~~~~~~~~---c~~~~~~~L~~L~L~~n~l~--g---~lp~~i~~L~~L~~L~L~~N~l~----~~~p-~~~~l~~L~ 466 (824)
. ....+. .....+++|+.|+|++|+++ | .+|..+.++++|+.|+|++|.|+ +.+| .+..+++|+
T Consensus 171 l---~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~ 247 (386)
T 2ca6_A 171 L---ENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLR 247 (386)
T ss_dssp C---TGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCC
T ss_pred C---CcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcC
Confidence 1 001111 01113468999999999998 3 35558889999999999999995 4444 488899999
Q ss_pred eEeecccccCCC----CCccc--cCCCccceeeeccccccc----cccccc---cccceeccccCCccc
Q 003385 467 IIHLEDNQLTGP----LPSSL--MNLPNLRELYVQNNMLSG----TVPSSL---LSKNVVLNYAGNINL 522 (824)
Q Consensus 467 ~L~L~~N~l~g~----lP~~l--~~l~~L~~L~l~~N~l~g----~ip~~l---~~~~~~l~~~~n~~l 522 (824)
.|+|++|+|++. +|..+ +.+++|+.|+|++|++++ .+|..+ +..+..+.+.+|...
T Consensus 248 ~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~ 316 (386)
T 2ca6_A 248 ELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFS 316 (386)
T ss_dssp EEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSC
T ss_pred EEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCC
Confidence 999999999865 67777 448999999999999996 488877 455677788888544
No 368
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.24 E-value=8.3e-12 Score=136.48 Aligned_cols=169 Identities=17% Similarity=0.182 Sum_probs=121.8
Q ss_pred cccceeeecccccCCCCCCcccchhhhceeccCCCCCCcHHHHHHHHHhcCCCCcccCCCCCCCCCCCCeeEcCCCCCCc
Q 003385 338 SLPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPS 417 (824)
Q Consensus 338 ~l~~l~~L~L~~n~~s~LPP~i~~le~l~~L~l~~n~~~~~~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~c~~~~~~~ 417 (824)
.+++|+.|+++.|.++.+++ +..++.|+.|+++.|.+..... +..+..+....... |. ...+.. ...+++
T Consensus 153 ~l~~L~~L~l~~~~~~~~~~-~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~---n~---l~~~~~-~~~~~~ 222 (347)
T 4fmz_A 153 NMTGLNYLTVTESKVKDVTP-IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYV---NQ---ITDITP-VANMTR 222 (347)
T ss_dssp TCTTCCEEECCSSCCCCCGG-GGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCS---SC---CCCCGG-GGGCTT
T ss_pred hCCCCcEEEecCCCcCCchh-hccCCCCCEEEccCCccccccc--ccCCCccceeeccc---CC---CCCCch-hhcCCc
Confidence 45678888889999888887 7888889999998887654221 33333333322111 10 111111 234678
Q ss_pred eeEEEecCCCCCccCChhhhcccccccccccccccCCCCCCCCCCCCcceEeecccccCCCCCccccCCCccceeeeccc
Q 003385 418 ITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNN 497 (824)
Q Consensus 418 L~~L~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~L~~L~l~~N 497 (824)
|+.|+|++|+++ .+|. +..+++|+.|+|++|++++. +.+..+++|+.|+|++|++++ + +.+..+++|+.|++++|
T Consensus 223 L~~L~l~~n~l~-~~~~-~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~L~~n 297 (347)
T 4fmz_A 223 LNSLKIGNNKIT-DLSP-LANLSQLTWLEIGTNQISDI-NAVKDLTKLKMLNVGSNQISD-I-SVLNNLSQLNSLFLNNN 297 (347)
T ss_dssp CCEEECCSSCCC-CCGG-GTTCTTCCEEECCSSCCCCC-GGGTTCTTCCEEECCSSCCCC-C-GGGGGCTTCSEEECCSS
T ss_pred CCEEEccCCccC-CCcc-hhcCCCCCEEECCCCccCCC-hhHhcCCCcCEEEccCCccCC-C-hhhcCCCCCCEEECcCC
Confidence 999999999999 4555 88999999999999999885 668889999999999999994 4 46889999999999999
Q ss_pred ccccccccccc--ccceeccccCCcc
Q 003385 498 MLSGTVPSSLL--SKNVVLNYAGNIN 521 (824)
Q Consensus 498 ~l~g~ip~~l~--~~~~~l~~~~n~~ 521 (824)
++++..|..+. ..+..+.+++|..
T Consensus 298 ~l~~~~~~~l~~l~~L~~L~L~~n~l 323 (347)
T 4fmz_A 298 QLGNEDMEVIGGLTNLTTLFLSQNHI 323 (347)
T ss_dssp CCCGGGHHHHHTCTTCSEEECCSSSC
T ss_pred cCCCcChhHhhccccCCEEEccCCcc
Confidence 99866665543 3446677788753
No 369
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.23 E-value=9.3e-12 Score=142.22 Aligned_cols=148 Identities=23% Similarity=0.260 Sum_probs=78.7
Q ss_pred ccceeeecccccCCCCCCcccchhhhceeccCCCCCCcHHHHHHHHHhcCCCCcccCCCCCCCCCCCCeeEcCCCCCCce
Q 003385 339 LPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSI 418 (824)
Q Consensus 339 l~~l~~L~L~~n~~s~LPP~i~~le~l~~L~l~~n~~~~~~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~c~~~~~~~L 418 (824)
+++|+.|+|+.|.++.++| +..++.|+.|+++.|.+... ..+..+..+..+..+++. ...+.. ...+++|
T Consensus 198 l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~------l~~~~~-~~~l~~L 267 (466)
T 1o6v_A 198 LTNLESLIATNNQISDITP-LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQ------ISNLAP-LSGLTKL 267 (466)
T ss_dssp CTTCSEEECCSSCCCCCGG-GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSC------CCCCGG-GTTCTTC
T ss_pred CCCCCEEEecCCccccccc-ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCc------cccchh-hhcCCCC
Confidence 4566667777777776666 56666677777766655431 112222222222111100 000000 1234556
Q ss_pred eEEEecCCCCCccCChhhhcccccccccccccccCCCCCCCCCCCCcceEeecccccCCCCCccccCCCccceeeecccc
Q 003385 419 TVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNM 498 (824)
Q Consensus 419 ~~L~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~L~~L~l~~N~ 498 (824)
+.|+|++|++++ +|. +..+++|+.|+|++|++++.++ +..+++|+.|+|++|++++..| ++.+++|+.|++++|+
T Consensus 268 ~~L~l~~n~l~~-~~~-~~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~ 342 (466)
T 1o6v_A 268 TELKLGANQISN-ISP-LAGLTALTNLELNENQLEDISP-ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNK 342 (466)
T ss_dssp SEEECCSSCCCC-CGG-GTTCTTCSEEECCSSCCSCCGG-GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSC
T ss_pred CEEECCCCccCc-ccc-ccCCCccCeEEcCCCcccCchh-hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCc
Confidence 666666666663 333 5666666666666666665544 5556666666666666664433 5566666666666666
Q ss_pred ccc
Q 003385 499 LSG 501 (824)
Q Consensus 499 l~g 501 (824)
+++
T Consensus 343 l~~ 345 (466)
T 1o6v_A 343 VSD 345 (466)
T ss_dssp CCC
T ss_pred cCC
Confidence 663
No 370
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.23 E-value=1e-11 Score=145.03 Aligned_cols=155 Identities=17% Similarity=0.175 Sum_probs=112.6
Q ss_pred cceeeecccccCCCCCCcccchhhhceeccCCCCCCcHHHHHHHHHhcCCCCcccCCCCCCCCCCCCeeEcCCCCCCcee
Q 003385 340 PFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSIT 419 (824)
Q Consensus 340 ~~l~~L~L~~n~~s~LPP~i~~le~l~~L~l~~n~~~~~~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~c~~~~~~~L~ 419 (824)
++|+.|+|++|.++.+| ..++.|+.|+++.|.+..+.. +.. .+..+..+++. ..+++- .+++|+
T Consensus 80 ~~L~~L~Ls~N~l~~ip---~~l~~L~~L~Ls~N~l~~ip~--l~~--~L~~L~Ls~N~------l~~lp~---~l~~L~ 143 (571)
T 3cvr_A 80 PQITVLEITQNALISLP---ELPASLEYLDACDNRLSTLPE--LPA--SLKHLDVDNNQ------LTMLPE---LPALLE 143 (571)
T ss_dssp TTCSEEECCSSCCSCCC---CCCTTCCEEECCSSCCSCCCC--CCT--TCCEEECCSSC------CSCCCC---CCTTCC
T ss_pred CCCCEEECcCCCCcccc---cccCCCCEEEccCCCCCCcch--hhc--CCCEEECCCCc------CCCCCC---cCcccc
Confidence 46889999999999998 557899999999998775211 211 23322222111 111111 457899
Q ss_pred EEEecCCCCCccCChhhhcccccccccccccccCCCCCCCCCCCCcceEeecccccCCCCCccccCCCcc-------cee
Q 003385 420 VIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNL-------REL 492 (824)
Q Consensus 420 ~L~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~L-------~~L 492 (824)
.|+|++|+|++ +|. .+++|+.|+|++|+|+++++ |. ++|+.|+|++|+|+ .+|. |.+ +| +.|
T Consensus 144 ~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~lp~-l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L 212 (571)
T 3cvr_A 144 YINADNNQLTM-LPE---LPTSLEVLSVRNNQLTFLPE-LP--ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFF 212 (571)
T ss_dssp EEECCSSCCSC-CCC---CCTTCCEEECCSSCCSCCCC-CC--TTCCEEECCSSCCS-SCCC-CC----------CCEEE
T ss_pred EEeCCCCccCc-CCC---cCCCcCEEECCCCCCCCcch-hh--CCCCEEECcCCCCC-chhh-HHH--hhhcccccceEE
Confidence 99999999994 776 67899999999999998655 65 89999999999999 7887 665 77 999
Q ss_pred eeccccccccccccccc--cceeccccCCccc
Q 003385 493 YVQNNMLSGTVPSSLLS--KNVVLNYAGNINL 522 (824)
Q Consensus 493 ~l~~N~l~g~ip~~l~~--~~~~l~~~~n~~l 522 (824)
+|++|+|+ .+|..++. .+..+.+++|+..
T Consensus 213 ~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~ 243 (571)
T 3cvr_A 213 RCRENRIT-HIPENILSLDPTCTIILEDNPLS 243 (571)
T ss_dssp ECCSSCCC-CCCGGGGGSCTTEEEECCSSSCC
T ss_pred ecCCCcce-ecCHHHhcCCCCCEEEeeCCcCC
Confidence 99999999 89988765 3366777888644
No 371
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.22 E-value=1.6e-11 Score=140.02 Aligned_cols=162 Identities=17% Similarity=0.092 Sum_probs=92.7
Q ss_pred cccceeeecccccCCCCCCcccchhhhceeccCCCCCCcHHHHHHHHHhcCCCCcccCCCCCCCCCCCCeeEcCCCCCCc
Q 003385 338 SLPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPS 417 (824)
Q Consensus 338 ~l~~l~~L~L~~n~~s~LPP~i~~le~l~~L~l~~n~~~~~~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~c~~~~~~~ 417 (824)
.++.|+.|+|+.|.++.+| .+..++.|+.|+++.|.+.... +..+..++....+.+. ...+ ....+++
T Consensus 40 ~l~~L~~L~Ls~n~l~~~~-~l~~l~~L~~L~Ls~n~l~~~~---~~~l~~L~~L~Ls~N~------l~~~--~~~~l~~ 107 (457)
T 3bz5_A 40 QLATLTSLDCHNSSITDMT-GIEKLTGLTKLICTSNNITTLD---LSQNTNLTYLACDSNK------LTNL--DVTPLTK 107 (457)
T ss_dssp HHTTCCEEECCSSCCCCCT-TGGGCTTCSEEECCSSCCSCCC---CTTCTTCSEEECCSSC------CSCC--CCTTCTT
T ss_pred HcCCCCEEEccCCCcccCh-hhcccCCCCEEEccCCcCCeEc---cccCCCCCEEECcCCC------Ccee--ecCCCCc
Confidence 3567777777777777775 5777777777777777765532 2222222222221111 1111 1234566
Q ss_pred eeEEEecCCCCCccCChhhhcccccccccccccccCCCCCCCCCCCCcceEeecccccCCCCCccccCCCccceeeeccc
Q 003385 418 ITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNN 497 (824)
Q Consensus 418 L~~L~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~L~~L~l~~N 497 (824)
|++|+|++|++++ +| ++++++|+.|+|++|+|++. .++++++|+.|+|++|+..+.+ .++.+++|+.|++++|
T Consensus 108 L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l--~l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n 180 (457)
T 3bz5_A 108 LTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTEI--DVSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFN 180 (457)
T ss_dssp CCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSCC--CCTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSS
T ss_pred CCEEECCCCcCCe-ec--CCCCCcCCEEECCCCcccee--ccccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCC
Confidence 7777777777774 44 66777777777777777764 2566666666666666544455 3566666666666666
Q ss_pred cccccccccccccceeccccCC
Q 003385 498 MLSGTVPSSLLSKNVVLNYAGN 519 (824)
Q Consensus 498 ~l~g~ip~~l~~~~~~l~~~~n 519 (824)
+++ .+|-.-+..+..+.+++|
T Consensus 181 ~l~-~l~l~~l~~L~~L~l~~N 201 (457)
T 3bz5_A 181 KIT-ELDVSQNKLLNRLNCDTN 201 (457)
T ss_dssp CCC-CCCCTTCTTCCEEECCSS
T ss_pred ccc-eeccccCCCCCEEECcCC
Confidence 666 355333333344444444
No 372
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.21 E-value=1.4e-11 Score=120.18 Aligned_cols=104 Identities=22% Similarity=0.266 Sum_probs=87.7
Q ss_pred CCceeEEEecCCCCC-ccCChhhhcccccccccccccccCCCCCCCCCCCCcceEeecccccCCCCCccccCCCccceee
Q 003385 415 QPSITVIHLSSKNLT-GNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELY 493 (824)
Q Consensus 415 ~~~L~~L~L~~n~l~-g~lp~~i~~L~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~L~~L~ 493 (824)
+++|+.|+|++|+++ +.+|..+..+++|+.|+|++|+|++. +.+..+++|+.|+|++|+|++.+|..++++++|+.|+
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV-SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC-SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh-hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 468999999999998 88999899999999999999999988 7789999999999999999977888888899999999
Q ss_pred ecccccccccc--ccc--cccceeccccCCc
Q 003385 494 VQNNMLSGTVP--SSL--LSKNVVLNYAGNI 520 (824)
Q Consensus 494 l~~N~l~g~ip--~~l--~~~~~~l~~~~n~ 520 (824)
|++|+++ .+| ..+ +..+..+.+++|.
T Consensus 102 Ls~N~l~-~~~~~~~l~~l~~L~~L~l~~N~ 131 (168)
T 2ell_A 102 LSGNKLK-DISTLEPLKKLECLKSLDLFNCE 131 (168)
T ss_dssp CBSSSCC-SSGGGGGGSSCSCCCEEECCSSG
T ss_pred ccCCccC-cchhHHHHhcCCCCCEEEeeCCc
Confidence 9999998 554 333 2334666777774
No 373
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.19 E-value=1.1e-11 Score=118.41 Aligned_cols=104 Identities=18% Similarity=0.215 Sum_probs=83.7
Q ss_pred CCceeEEEecCCCCC-ccCChhhhcccccccccccccccCCCCCCCCCCCCcceEeecccccCCCCCccccCCCccceee
Q 003385 415 QPSITVIHLSSKNLT-GNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELY 493 (824)
Q Consensus 415 ~~~L~~L~L~~n~l~-g~lp~~i~~L~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~L~~L~ 493 (824)
.++|+.|+|++|+++ +.+|..+..+++|+.|+|++|++++. +.+.++++|+.|+|++|+|++.+|..++.+++|+.|+
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI-ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC-TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc-hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 357889999999988 78888888899999999999998887 6788889999999999999877888888888999999
Q ss_pred ecccccccccc--cccc--ccceeccccCCc
Q 003385 494 VQNNMLSGTVP--SSLL--SKNVVLNYAGNI 520 (824)
Q Consensus 494 l~~N~l~g~ip--~~l~--~~~~~l~~~~n~ 520 (824)
+++|++++ +| ..+. ..+..+.+++|.
T Consensus 95 ls~N~i~~-~~~~~~~~~l~~L~~L~l~~N~ 124 (149)
T 2je0_A 95 LSGNKIKD-LSTIEPLKKLENLKSLDLFNCE 124 (149)
T ss_dssp CTTSCCCS-HHHHGGGGGCTTCCEEECTTCG
T ss_pred CCCCcCCC-hHHHHHHhhCCCCCEEeCcCCc
Confidence 99999884 43 4442 334566677774
No 374
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.19 E-value=1.5e-11 Score=134.67 Aligned_cols=102 Identities=19% Similarity=0.217 Sum_probs=69.3
Q ss_pred EEecCC-CCCccCChhhhcccccccccccc-cccCCCCCC-CCCCCCcceEeecccccCCCCCccccCCCccceeeeccc
Q 003385 421 IHLSSK-NLTGNIPSDLTKLSSLVELWLDG-NSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNN 497 (824)
Q Consensus 421 L~L~~n-~l~g~lp~~i~~L~~L~~L~L~~-N~l~~~~p~-~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~L~~L~l~~N 497 (824)
++++++ +|+ .+|. |..+++|+.|+|++ |+|+++++. |.+|++|+.|+|++|+|++..|..|++|++|+.|+|++|
T Consensus 13 v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N 90 (347)
T 2ifg_A 13 LRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFN 90 (347)
T ss_dssp EECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSS
T ss_pred EEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCC
Confidence 455665 676 5676 77777777777775 777777664 677777777777777777666667777777777777777
Q ss_pred ccccccccccccc--ceeccccCCccccCC
Q 003385 498 MLSGTVPSSLLSK--NVVLNYAGNINLHEG 525 (824)
Q Consensus 498 ~l~g~ip~~l~~~--~~~l~~~~n~~lc~~ 525 (824)
+|+ .+|..++.. +..|.+.+|+..|.+
T Consensus 91 ~l~-~~~~~~~~~~~L~~l~l~~N~~~c~c 119 (347)
T 2ifg_A 91 ALE-SLSWKTVQGLSLQELVLSGNPLHCSC 119 (347)
T ss_dssp CCS-CCCSTTTCSCCCCEEECCSSCCCCCG
T ss_pred ccc-eeCHHHcccCCceEEEeeCCCccCCC
Confidence 777 566665543 345566667666654
No 375
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.18 E-value=3.5e-11 Score=142.02 Aligned_cols=85 Identities=31% Similarity=0.342 Sum_probs=62.2
Q ss_pred CceeEEEecCCCCCccCChhhhcccccccccccccccCCCCCCCCCCCCcceEeecccccCCCCCccccCCCccceeeec
Q 003385 416 PSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQ 495 (824)
Q Consensus 416 ~~L~~L~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~L~~L~l~ 495 (824)
++|+.|+|++|+|+ .+| ..+++|+.|+|++|+|+++++ .+++|+.|+|++|+|+ .+|..|+++++|+.|+|+
T Consensus 221 ~~L~~L~Ls~N~L~-~lp---~~l~~L~~L~Ls~N~L~~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~ 292 (622)
T 3g06_A 221 SGLKELIVSGNRLT-SLP---VLPSELKELMVSGNRLTSLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLE 292 (622)
T ss_dssp TTCCEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSCCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECC
T ss_pred CCCCEEEccCCccC-cCC---CCCCcCcEEECCCCCCCcCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEec
Confidence 56777777777777 466 455777777787777776554 5677778888888887 777778888888888888
Q ss_pred ccccccccccccc
Q 003385 496 NNMLSGTVPSSLL 508 (824)
Q Consensus 496 ~N~l~g~ip~~l~ 508 (824)
+|+++|.+|..+.
T Consensus 293 ~N~l~~~~~~~l~ 305 (622)
T 3g06_A 293 GNPLSERTLQALR 305 (622)
T ss_dssp SCCCCHHHHHHHH
T ss_pred CCCCCCcCHHHHH
Confidence 8888766666543
No 376
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.16 E-value=6.6e-11 Score=124.15 Aligned_cols=140 Identities=18% Similarity=0.094 Sum_probs=108.7
Q ss_pred HhhccccccCcEEEEEEEEcCCcEEEEEEeccCCcccchhhhHHHHHHhhcC-CCccceeeceeecCCeEEEEEEecCCC
Q 003385 604 MLEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIH-HRNLVQFLGYCQEEGRSVLVYEFMHNG 682 (824)
Q Consensus 604 ~i~~~LG~G~fg~Vy~a~~~~g~~vAVK~l~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~~~lV~E~~~~g 682 (824)
.+...++.|+.+.||+.... ++.+++|+...........+.+|+++++.+. |..+.++++++.+.+..++||||++|.
T Consensus 17 ~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~ 95 (263)
T 3tm0_A 17 RCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGV 95 (263)
T ss_dssp EEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSE
T ss_pred eeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecCCe
Confidence 34566788888999999754 6899999987533233457899999999985 677889999998888999999999999
Q ss_pred CHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCC-----------------------------------------
Q 003385 683 TLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGC----------------------------------------- 721 (824)
Q Consensus 683 sL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~----------------------------------------- 721 (824)
+|.+.+.. ......++.+++++|..||+..
T Consensus 96 ~l~~~~~~---------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (263)
T 3tm0_A 96 LCSEEYED---------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKD 166 (263)
T ss_dssp EHHHHCCT---------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSS
T ss_pred ehhhccCC---------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCC
Confidence 98775311 1122367889999999999810
Q ss_pred ---------------CCCeEecCCCCCCEEEcCCCcEEEEecCCccc
Q 003385 722 ---------------VPAIIHRDLKSSNILLDKHMRAKVSDFGLSKF 753 (824)
Q Consensus 722 ---------------~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~ 753 (824)
.+.++|+|++|.|||++++..+.|+||+.+..
T Consensus 167 ~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~ 213 (263)
T 3tm0_A 167 PRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR 213 (263)
T ss_dssp HHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence 03589999999999998765567999997753
No 377
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.16 E-value=1.9e-11 Score=143.05 Aligned_cols=90 Identities=26% Similarity=0.293 Sum_probs=82.8
Q ss_pred CCCceeEEEecCCCCCccCChhhhcccccccccccccccCCCCCCCCCCCCcceEeecccccCCCC-CccccCCCcccee
Q 003385 414 PQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPL-PSSLMNLPNLREL 492 (824)
Q Consensus 414 ~~~~L~~L~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~g~l-P~~l~~l~~L~~L 492 (824)
.+++|+.|+|++|+|+ .+|..|++|++|+.|+|++|+|+++ |.+++|++|+.|+|++|+|++.. |..|++|++|+.|
T Consensus 461 ~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~l-p~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L 538 (567)
T 1dce_A 461 QLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALENV-DGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLL 538 (567)
T ss_dssp GGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCC-GGGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEE
T ss_pred ccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCCC-cccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEE
Confidence 4568999999999999 9999999999999999999999995 48999999999999999999776 9999999999999
Q ss_pred eecccccccccccc
Q 003385 493 YVQNNMLSGTVPSS 506 (824)
Q Consensus 493 ~l~~N~l~g~ip~~ 506 (824)
+|++|+|++ +|+.
T Consensus 539 ~L~~N~l~~-~~~~ 551 (567)
T 1dce_A 539 NLQGNSLCQ-EEGI 551 (567)
T ss_dssp ECTTSGGGG-SSSC
T ss_pred EecCCcCCC-CccH
Confidence 999999994 4443
No 378
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.14 E-value=1.8e-10 Score=135.93 Aligned_cols=92 Identities=30% Similarity=0.382 Sum_probs=55.6
Q ss_pred ceeEEEecCCCCCccCChhhhcccccccccccccccCCCCCCCCCCCCcceEeecccccCCCCCccccCCCccceeeecc
Q 003385 417 SITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQN 496 (824)
Q Consensus 417 ~L~~L~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~L~~L~l~~ 496 (824)
+|+.|+|++|+|+ .+|.. +++|+.|+|++|+|++++ ..+++|+.|+|++|+|+ .+|. .+++|+.|+|++
T Consensus 202 ~L~~L~L~~N~l~-~l~~~---~~~L~~L~Ls~N~L~~lp---~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~ 270 (622)
T 3g06_A 202 ELYKLWAYNNRLT-SLPAL---PSGLKELIVSGNRLTSLP---VLPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYR 270 (622)
T ss_dssp TCCEEECCSSCCS-SCCCC---CTTCCEEECCSSCCSCCC---CCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCS
T ss_pred hhhEEECcCCccc-ccCCC---CCCCCEEEccCCccCcCC---CCCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCC
Confidence 4444444444444 33321 256677777777777644 44567777777777777 5665 456777777777
Q ss_pred ccccccccccccc--cceeccccCCc
Q 003385 497 NMLSGTVPSSLLS--KNVVLNYAGNI 520 (824)
Q Consensus 497 N~l~g~ip~~l~~--~~~~l~~~~n~ 520 (824)
|+|+ .+|..+.. .+..+.+++|+
T Consensus 271 N~L~-~lp~~l~~l~~L~~L~L~~N~ 295 (622)
T 3g06_A 271 NQLT-RLPESLIHLSSETTVNLEGNP 295 (622)
T ss_dssp SCCC-SCCGGGGGSCTTCEEECCSCC
T ss_pred CCCC-cCCHHHhhccccCEEEecCCC
Confidence 7777 77766533 23455666664
No 379
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.13 E-value=1.4e-10 Score=132.14 Aligned_cols=137 Identities=27% Similarity=0.360 Sum_probs=86.8
Q ss_pred cceeeecccccCCCCCCcccchhhhceeccCCCCCCcHHHHHHHHHhcCCCCcccCCCCCCCCCCCCeeEcCCCCCCcee
Q 003385 340 PFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSIT 419 (824)
Q Consensus 340 ~~l~~L~L~~n~~s~LPP~i~~le~l~~L~l~~n~~~~~~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~c~~~~~~~L~ 419 (824)
++|+.|+|+.|.++.+| .+..++.|+.|+++.|.+... .. ..++|+
T Consensus 131 ~~L~~L~L~~n~l~~lp-~~~~l~~L~~L~l~~N~l~~l-----------p~----------------------~~~~L~ 176 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEKLP-ELQNSSFLKIIDVDNNSLKKL-----------PD----------------------LPPSLE 176 (454)
T ss_dssp TTCCEEECCSSCCSSCC-CCTTCTTCCEEECCSSCCSCC-----------CC----------------------CCTTCC
T ss_pred CCCCEEECcCCCCCCCc-ccCCCCCCCEEECCCCcCccc-----------CC----------------------Cccccc
Confidence 57788888888888887 588888888888888866520 00 012566
Q ss_pred EEEecCCCCCccCChhhhcccccccccccccccCCCCCCCCCCCCcceEeecccccCCCCCccccCCCccceeeeccccc
Q 003385 420 VIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNML 499 (824)
Q Consensus 420 ~L~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~L~~L~l~~N~l 499 (824)
+|+|++|++++ +| .+++|++|+.|+|++|++++.+... ++|+.|+|++|+++ .+|+ ++.+++|+.|++++|++
T Consensus 177 ~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~l~~~~---~~L~~L~l~~n~l~-~lp~-~~~l~~L~~L~l~~N~l 249 (454)
T 1jl5_A 177 FIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKKLPDLP---LSLESIVAGNNILE-ELPE-LQNLPFLTTIYADNNLL 249 (454)
T ss_dssp EEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSSCCCCC---TTCCEEECCSSCCS-SCCC-CTTCTTCCEEECCSSCC
T ss_pred EEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCcCCCCc---CcccEEECcCCcCC-cccc-cCCCCCCCEEECCCCcC
Confidence 66666666663 55 4666666666666666666533221 46666666666666 5663 66666666666666666
Q ss_pred cccccccccccceeccccCC
Q 003385 500 SGTVPSSLLSKNVVLNYAGN 519 (824)
Q Consensus 500 ~g~ip~~l~~~~~~l~~~~n 519 (824)
+ .+|.. ...+..+.+++|
T Consensus 250 ~-~l~~~-~~~L~~L~l~~N 267 (454)
T 1jl5_A 250 K-TLPDL-PPSLEALNVRDN 267 (454)
T ss_dssp S-SCCSC-CTTCCEEECCSS
T ss_pred C-ccccc-ccccCEEECCCC
Confidence 6 45542 234444555544
No 380
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.13 E-value=4.1e-11 Score=131.19 Aligned_cols=84 Identities=26% Similarity=0.271 Sum_probs=61.4
Q ss_pred CceeEEEecC-CCCCccCChhhhcccccccccccccccCCCCCC-CCCCCCcceEeecccccCCCCCccccCCCccceee
Q 003385 416 PSITVIHLSS-KNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELY 493 (824)
Q Consensus 416 ~~L~~L~L~~-n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~L~~L~ 493 (824)
++|+.|+|++ |+|++..|..|++|++|+.|+|++|+|++++|. |.+|++|+.|+|++|+|++..|..+..++ |+.|+
T Consensus 31 ~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~ 109 (347)
T 2ifg_A 31 ENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQGLS-LQELV 109 (347)
T ss_dssp SCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCSCCCSTTTCSCC-CCEEE
T ss_pred CCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCCccceeCHHHcccCC-ceEEE
Confidence 4577777775 777765566777888888888888888887775 67788888888888888844444454444 88888
Q ss_pred ecccccc
Q 003385 494 VQNNMLS 500 (824)
Q Consensus 494 l~~N~l~ 500 (824)
|++|+|.
T Consensus 110 l~~N~~~ 116 (347)
T 2ifg_A 110 LSGNPLH 116 (347)
T ss_dssp CCSSCCC
T ss_pred eeCCCcc
Confidence 8888777
No 381
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.10 E-value=3.3e-12 Score=138.98 Aligned_cols=158 Identities=16% Similarity=0.160 Sum_probs=96.5
Q ss_pred cccceeeecccccCCCC--CCcccchhhhceeccCCCCCCcHHHHHHHHHhcCCCCcccCCCCCCCCCCCCeeEcCCCCC
Q 003385 338 SLPFVLSFKFGKTYDSS--RGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQ 415 (824)
Q Consensus 338 ~l~~l~~L~L~~n~~s~--LPP~i~~le~l~~L~l~~n~~~~~~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~c~~~~~ 415 (824)
.+++|+.|+|+.|.++. +|..+..++.|+.|+++.|.+....+..+.++..++.+..++ |.......+......+
T Consensus 91 ~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~---~~~l~~~~l~~~~~~~ 167 (336)
T 2ast_B 91 SPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSG---CSGFSEFALQTLLSSC 167 (336)
T ss_dssp CCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTT---CBSCCHHHHHHHHHHC
T ss_pred cCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCC---CCCCCHHHHHHHHhcC
Confidence 35677777777777764 666677777777777777777665666665554454443221 1000000111001234
Q ss_pred CceeEEEecCC-CCCcc-CChhhhccc-cccccccccc--ccC-CCCC-CCCCCCCcceEeecccc-cCCCCCccccCCC
Q 003385 416 PSITVIHLSSK-NLTGN-IPSDLTKLS-SLVELWLDGN--SLT-GPIP-DFSGCPDLRIIHLEDNQ-LTGPLPSSLMNLP 487 (824)
Q Consensus 416 ~~L~~L~L~~n-~l~g~-lp~~i~~L~-~L~~L~L~~N--~l~-~~~p-~~~~l~~L~~L~L~~N~-l~g~lP~~l~~l~ 487 (824)
++|++|+|++| ++++. ++..+..++ +|+.|+|++| .++ +.++ .+.++++|+.|+|++|. +++..+..+++++
T Consensus 168 ~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~ 247 (336)
T 2ast_B 168 SRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLN 247 (336)
T ss_dssp TTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCT
T ss_pred CCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCC
Confidence 56777777777 77643 566677777 7777777777 343 2333 35567777777777777 6656666777777
Q ss_pred ccceeeecccc
Q 003385 488 NLRELYVQNNM 498 (824)
Q Consensus 488 ~L~~L~l~~N~ 498 (824)
+|+.|+|++|.
T Consensus 248 ~L~~L~l~~~~ 258 (336)
T 2ast_B 248 YLQHLSLSRCY 258 (336)
T ss_dssp TCCEEECTTCT
T ss_pred CCCEeeCCCCC
Confidence 77777777774
No 382
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.10 E-value=1e-12 Score=132.28 Aligned_cols=123 Identities=17% Similarity=0.243 Sum_probs=103.3
Q ss_pred ccCCCCCCcccchhhhceeccCCCCCCcHHHHHHHHHhcCCCCcccCCCCCCCCCCCCeeEcCCCCCCceeEEEecCCCC
Q 003385 349 KTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSITVIHLSSKNL 428 (824)
Q Consensus 349 ~n~~s~LPP~i~~le~l~~L~l~~n~~~~~~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~c~~~~~~~L~~L~L~~n~l 428 (824)
.+.++.+|..+..++.|+.|+++.|.+... + . ...+++|+.|+|++|++
T Consensus 34 ~~~l~~l~~~~~~l~~L~~L~ls~n~l~~l-------------------------~--~----~~~l~~L~~L~l~~n~l 82 (198)
T 1ds9_A 34 IPPIEKMDATLSTLKACKHLALSTNNIEKI-------------------------S--S----LSGMENLRILSLGRNLI 82 (198)
T ss_dssp CTTCCCCHHHHHHTTTCSEEECSEEEESCC-------------------------C--C----HHHHTTCCEEEEEEEEE
T ss_pred cCcHhhhhHHHhcCCCCCEEECCCCCCccc-------------------------c--c----cccCCCCCEEECCCCCc
Confidence 346677777899999999999998876630 0 0 02346899999999999
Q ss_pred CccCChhhhcccccccccccccccCCCCCCCCCCCCcceEeecccccCCCCC--ccccCCCccceeeeccccccccccc
Q 003385 429 TGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLP--SSLMNLPNLRELYVQNNMLSGTVPS 505 (824)
Q Consensus 429 ~g~lp~~i~~L~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~g~lP--~~l~~l~~L~~L~l~~N~l~g~ip~ 505 (824)
+ .+|..+..+++|+.|+|++|+|++. |.+..+++|+.|+|++|+|+ .+| ..++.+++|+.|++++|++++.+|.
T Consensus 83 ~-~l~~~~~~~~~L~~L~L~~N~l~~l-~~~~~l~~L~~L~l~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~ 158 (198)
T 1ds9_A 83 K-KIENLDAVADTLEELWISYNQIASL-SGIEKLVNLRVLYMSNNKIT-NWGEIDKLAALDKLEDLLLAGNPLYNDYKE 158 (198)
T ss_dssp C-SCSSHHHHHHHCSEEEEEEEECCCH-HHHHHHHHSSEEEESEEECC-CHHHHHHHTTTTTCSEEEECSCHHHHHHHT
T ss_pred c-cccchhhcCCcCCEEECcCCcCCcC-CccccCCCCCEEECCCCcCC-chhHHHHHhcCCCCCEEEecCCcccccccc
Confidence 9 8999999999999999999999985 47888999999999999999 444 4899999999999999999977665
No 383
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.10 E-value=1.8e-11 Score=136.19 Aligned_cols=182 Identities=18% Similarity=0.175 Sum_probs=130.4
Q ss_pred cccceeeecccccCCCCC----Cccc-------chhhhceeccCCCCCCcHH----HHHHHHHhcCCCCcccCCCCCCCC
Q 003385 338 SLPFVLSFKFGKTYDSSR----GPLL-------NAMEINKYLERNDGSIDGV----AIVSVISLYSSADWAQEGGDPCLP 402 (824)
Q Consensus 338 ~l~~l~~L~L~~n~~s~L----PP~i-------~~le~l~~L~l~~n~~~~~----~l~~lk~~~~~~~w~~~~~dpc~~ 402 (824)
.+++|+.|+|+.|.+..+ |+.+ ..++.|+.|+++.|.+... ....+.....+..+..+++. -..
T Consensus 58 ~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~-l~~ 136 (386)
T 2ca6_A 58 SKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNG-LGP 136 (386)
T ss_dssp TCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSC-CHH
T ss_pred hCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCC-CCH
Confidence 367889999999876644 4444 6778999999999998773 33345555556555332111 000
Q ss_pred CCCCeeEcCCCCC---------CceeEEEecCCCCC-ccCC---hhhhcccccccccccccccC--C---CCC-CCCCCC
Q 003385 403 VPWSWLQCNSDPQ---------PSITVIHLSSKNLT-GNIP---SDLTKLSSLVELWLDGNSLT--G---PIP-DFSGCP 463 (824)
Q Consensus 403 ~~~~~~~c~~~~~---------~~L~~L~L~~n~l~-g~lp---~~i~~L~~L~~L~L~~N~l~--~---~~p-~~~~l~ 463 (824)
.....+......+ ++|+.|+|++|+++ +.+| ..+..+++|+.|+|++|+|+ | ..| .+..++
T Consensus 137 ~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~ 216 (386)
T 2ca6_A 137 QAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQ 216 (386)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCT
T ss_pred HHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCC
Confidence 0000000000011 68999999999998 5566 57889999999999999998 3 556 688999
Q ss_pred CcceEeecccccC----CCCCccccCCCccceeeecccccccc----ccccc----cccceeccccCCc
Q 003385 464 DLRIIHLEDNQLT----GPLPSSLMNLPNLRELYVQNNMLSGT----VPSSL----LSKNVVLNYAGNI 520 (824)
Q Consensus 464 ~L~~L~L~~N~l~----g~lP~~l~~l~~L~~L~l~~N~l~g~----ip~~l----~~~~~~l~~~~n~ 520 (824)
+|+.|+|++|+|+ +.+|..+..+++|+.|+|++|++++. +|..+ ...+..+.+++|.
T Consensus 217 ~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~ 285 (386)
T 2ca6_A 217 ELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNE 285 (386)
T ss_dssp TCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSC
T ss_pred CccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCc
Confidence 9999999999996 57899999999999999999999865 56655 4556677777774
No 384
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.10 E-value=1.3e-11 Score=135.59 Aligned_cols=176 Identities=16% Similarity=0.171 Sum_probs=110.7
Q ss_pred cceeeecccccCCCCCCcc-cchhhhceeccCCCCCC-cHHHHHHHHHhcCCCCcccCCCCCCCCCCCCeeEc-CCCCCC
Q 003385 340 PFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSI-DGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQC-NSDPQP 416 (824)
Q Consensus 340 ~~l~~L~L~~n~~s~LPP~-i~~le~l~~L~l~~n~~-~~~~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~c-~~~~~~ 416 (824)
++++.|+|+.|.++.+|+. +.+++.|+.|+++.|++ +.+....+..+..+..+...+.+ ....+.- ....++
T Consensus 30 ~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N-----~l~~l~~~~f~~l~ 104 (350)
T 4ay9_X 30 RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKAN-----NLLYINPEAFQNLP 104 (350)
T ss_dssp TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEET-----TCCEECTTSBCCCT
T ss_pred CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCC-----cccccCchhhhhcc
Confidence 4678899999999999986 89999999999998875 32111111111111110000000 0011110 012344
Q ss_pred ceeEEEecCCCCCc------------------------cC-Chhhhccc-ccccccccccccCCCCCCCCCCCCcceEee
Q 003385 417 SITVIHLSSKNLTG------------------------NI-PSDLTKLS-SLVELWLDGNSLTGPIPDFSGCPDLRIIHL 470 (824)
Q Consensus 417 ~L~~L~L~~n~l~g------------------------~l-p~~i~~L~-~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L 470 (824)
+|+.|+|++|+|++ .+ +..|..+. .|+.|+|++|+|+.+++......+|+.|++
T Consensus 105 ~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~i~~~~f~~~~L~~l~l 184 (350)
T 4ay9_X 105 NLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNSAFNGTQLDELNL 184 (350)
T ss_dssp TCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEECTTSSTTEEEEEEEC
T ss_pred ccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccCCChhhccccchhHHhh
Confidence 45555555544442 22 22344443 577888888988888777666778888888
Q ss_pred cc-cccCCCCC-ccccCCCccceeeeccccccccccccccccceeccccCCccc
Q 003385 471 ED-NQLTGPLP-SSLMNLPNLRELYVQNNMLSGTVPSSLLSKNVVLNYAGNINL 522 (824)
Q Consensus 471 ~~-N~l~g~lP-~~l~~l~~L~~L~l~~N~l~g~ip~~l~~~~~~l~~~~n~~l 522 (824)
++ |+++ .+| +.|..+++|+.|+|++|+|+ .+|...+..+..+....+..+
T Consensus 185 ~~~n~l~-~i~~~~f~~l~~L~~LdLs~N~l~-~lp~~~~~~L~~L~~l~~~~l 236 (350)
T 4ay9_X 185 SDNNNLE-ELPNDVFHGASGPVILDISRTRIH-SLPSYGLENLKKLRARSTYNL 236 (350)
T ss_dssp TTCTTCC-CCCTTTTTTEECCSEEECTTSCCC-CCCSSSCTTCCEEECTTCTTC
T ss_pred ccCCccc-CCCHHHhccCcccchhhcCCCCcC-ccChhhhccchHhhhccCCCc
Confidence 75 6666 666 46789999999999999999 899888888777766555433
No 385
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.07 E-value=1.7e-10 Score=131.34 Aligned_cols=84 Identities=29% Similarity=0.386 Sum_probs=37.3
Q ss_pred ceeEEEecCCCCCccCChhhhcccccccccccccccCCCCCCCCCCCCcceEeecccccCC--CCCccccCC--------
Q 003385 417 SITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTG--PLPSSLMNL-------- 486 (824)
Q Consensus 417 ~L~~L~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~g--~lP~~l~~l-------- 486 (824)
+|+.|+|++|++++ +|.. +++|+.|+|++|+++++++ .+++|+.|+|++|++++ .+|.+++.|
T Consensus 318 ~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~~lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~L~~n~~~~~ 390 (454)
T 1jl5_A 318 SLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLAEVPE---LPQNLKQLHVEYNPLREFPDIPESVEDLRMNSHLAE 390 (454)
T ss_dssp TCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSCCCC---CCTTCCEEECCSSCCSSCCCCCTTCCEEECCC----
T ss_pred cCCEEECCCCcccc-cccc---CCcCCEEECCCCccccccc---hhhhccEEECCCCCCCcCCCChHHHHhhhhcccccc
Confidence 56666666666663 5543 3566666666666665333 35666666666666665 556666555
Q ss_pred -----Cccceeeeccccccc--cccccc
Q 003385 487 -----PNLRELYVQNNMLSG--TVPSSL 507 (824)
Q Consensus 487 -----~~L~~L~l~~N~l~g--~ip~~l 507 (824)
++|+.|++++|+++| .+|.++
T Consensus 391 i~~~~~~L~~L~ls~N~l~~~~~iP~sl 418 (454)
T 1jl5_A 391 VPELPQNLKQLHVETNPLREFPDIPESV 418 (454)
T ss_dssp ----------------------------
T ss_pred cccccCcCCEEECCCCcCCccccchhhH
Confidence 556666666666664 455443
No 386
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.04 E-value=1.9e-10 Score=113.26 Aligned_cols=104 Identities=17% Similarity=0.134 Sum_probs=82.6
Q ss_pred CCceeEEEecCCCCCccCChhhhccc-ccccccccccccCCCCCCCCCCCCcceEeecccccCCCCCccccCCCccceee
Q 003385 415 QPSITVIHLSSKNLTGNIPSDLTKLS-SLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELY 493 (824)
Q Consensus 415 ~~~L~~L~L~~n~l~g~lp~~i~~L~-~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~L~~L~ 493 (824)
+.+|+.|+|++|+++ .+|. +..+. +|+.|+|++|+|++. +.+.++++|+.|+|++|+|++..|..++.+++|+.|+
T Consensus 18 ~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~-~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 94 (176)
T 1a9n_A 18 AVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL-DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELI 94 (176)
T ss_dssp TTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE-CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEE
T ss_pred cCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc-cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEE
Confidence 358999999999999 6665 66655 999999999999987 7799999999999999999954334458999999999
Q ss_pred eccccccccccc--ccc--ccceeccccCCccc
Q 003385 494 VQNNMLSGTVPS--SLL--SKNVVLNYAGNINL 522 (824)
Q Consensus 494 l~~N~l~g~ip~--~l~--~~~~~l~~~~n~~l 522 (824)
|++|+++ .+|. .+. ..+..+.+.+|+..
T Consensus 95 L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~ 126 (176)
T 1a9n_A 95 LTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT 126 (176)
T ss_dssp CCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG
T ss_pred CCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC
Confidence 9999997 7776 432 33466777888643
No 387
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.02 E-value=6.3e-10 Score=115.88 Aligned_cols=131 Identities=19% Similarity=0.121 Sum_probs=98.1
Q ss_pred ccc-ccCcEEEEEEEEcCCcEEEEEEeccCCcccchhhhHHHHHHhhcCCCc--cceeeceeecCCeEEEEEEecCCCCH
Q 003385 608 KIG-SGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRN--LVQFLGYCQEEGRSVLVYEFMHNGTL 684 (824)
Q Consensus 608 ~LG-~G~fg~Vy~a~~~~g~~vAVK~l~~~~~~~~~~~~~Ei~il~~l~Hpn--Iv~l~~~~~~~~~~~lV~E~~~~gsL 684 (824)
.++ .|..+.||+....+|+.+++|+.... ....+.+|+++++.+.+.+ +.+++++....+..++||||++|.++
T Consensus 26 ~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l 102 (264)
T 1nd4_A 26 QQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDL 102 (264)
T ss_dssp ECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEET
T ss_pred ecccCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCccc
Confidence 344 55569999998777888999997643 2356889999999986544 55688888877788999999999887
Q ss_pred HHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCC-------------------------------------------
Q 003385 685 KEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGC------------------------------------------- 721 (824)
Q Consensus 685 ~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~------------------------------------------- 721 (824)
. .. . .. ...++.++++.|..||+..
T Consensus 103 ~--~~-~------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (264)
T 1nd4_A 103 L--SS-H------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAEL 170 (264)
T ss_dssp T--TS-C------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHH
T ss_pred C--cC-c------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHH
Confidence 3 21 1 11 1246777888888888641
Q ss_pred ------------CCCeEecCCCCCCEEEcCCCcEEEEecCCccc
Q 003385 722 ------------VPAIIHRDLKSSNILLDKHMRAKVSDFGLSKF 753 (824)
Q Consensus 722 ------------~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~ 753 (824)
...++|+|++|.|||+++++.+.|+|||.+..
T Consensus 171 ~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 171 FARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp HHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 01399999999999998776677999998754
No 388
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.01 E-value=2e-11 Score=132.77 Aligned_cols=175 Identities=14% Similarity=0.109 Sum_probs=132.3
Q ss_pred cceeeecccccCCCCCCcccchhhhceeccCCCCCCcHHHHH-HHHHhcCCCCcccCCCCCCCCCCCCe-eEcCCCCCCc
Q 003385 340 PFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIV-SVISLYSSADWAQEGGDPCLPVPWSW-LQCNSDPQPS 417 (824)
Q Consensus 340 ~~l~~L~L~~n~~s~LPP~i~~le~l~~L~l~~n~~~~~~l~-~lk~~~~~~~w~~~~~dpc~~~~~~~-~~c~~~~~~~ 417 (824)
+.++.|++..|.++..++.+..+..|+.|+++.|.+....+. .+..+..++....++ |. ... ..-....+++
T Consensus 70 ~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~---~~---l~~~~~~~l~~~~~ 143 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEG---LR---LSDPIVNTLAKNSN 143 (336)
T ss_dssp TTCSEEECTTCEECSCCCSCCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTT---CB---CCHHHHHHHTTCTT
T ss_pred ccceEEEcCCccccccchhhccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcC---cc---cCHHHHHHHhcCCC
Confidence 578899999999999999999999999999999998765444 444445555553322 21 111 0001134679
Q ss_pred eeEEEecCC-CCCcc-CChhhhccccccccccccc-ccCCC-CCC-CCCCC-CcceEeeccc--ccC-CCCCccccCCCc
Q 003385 418 ITVIHLSSK-NLTGN-IPSDLTKLSSLVELWLDGN-SLTGP-IPD-FSGCP-DLRIIHLEDN--QLT-GPLPSSLMNLPN 488 (824)
Q Consensus 418 L~~L~L~~n-~l~g~-lp~~i~~L~~L~~L~L~~N-~l~~~-~p~-~~~l~-~L~~L~L~~N--~l~-g~lP~~l~~l~~ 488 (824)
|++|+|++| .+++. +|..+.++++|+.|+|++| ++++. ++. +..++ +|+.|+|++| .++ +.+|..++++++
T Consensus 144 L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~ 223 (336)
T 2ast_B 144 LVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPN 223 (336)
T ss_dssp CSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTT
T ss_pred CCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCC
Confidence 999999999 78863 7888999999999999999 89874 344 77899 9999999999 455 467888889999
Q ss_pred cceeeecccc-ccccccccccc--cceeccccCCc
Q 003385 489 LRELYVQNNM-LSGTVPSSLLS--KNVVLNYAGNI 520 (824)
Q Consensus 489 L~~L~l~~N~-l~g~ip~~l~~--~~~~l~~~~n~ 520 (824)
|+.|+|++|. +++..+..+.. .+..+.+++|.
T Consensus 224 L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~ 258 (336)
T 2ast_B 224 LVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCY 258 (336)
T ss_dssp CSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCT
T ss_pred CCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCC
Confidence 9999999999 77677766643 34667777775
No 389
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.00 E-value=1.6e-11 Score=135.55 Aligned_cols=180 Identities=17% Similarity=0.123 Sum_probs=116.4
Q ss_pred cceeeecccccCCCCCCc-----ccchhh-hceeccCCCCCCcHHHHHHHHHh-----cCCCCcccCCCCCCCCCCCCee
Q 003385 340 PFVLSFKFGKTYDSSRGP-----LLNAME-INKYLERNDGSIDGVAIVSVISL-----YSSADWAQEGGDPCLPVPWSWL 408 (824)
Q Consensus 340 ~~l~~L~L~~n~~s~LPP-----~i~~le-~l~~L~l~~n~~~~~~l~~lk~~-----~~~~~w~~~~~dpc~~~~~~~~ 408 (824)
++|+.|+|+.|.++..++ .+..+. .|+.|+++.|.+.......+... ..++.++.+++.-. ......+
T Consensus 22 ~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~-~~~~~~l 100 (362)
T 3goz_A 22 HGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLS-YKSSDEL 100 (362)
T ss_dssp TTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGG-GSCHHHH
T ss_pred CCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCC-hHHHHHH
Confidence 348899999999999986 366666 89999999998887655555554 34444433211100 0000000
Q ss_pred EcCCCCC-CceeEEEecCCCCCccCChhhhc-----ccccccccccccccCCCCC-----CCCCCC-CcceEeecccccC
Q 003385 409 QCNSDPQ-PSITVIHLSSKNLTGNIPSDLTK-----LSSLVELWLDGNSLTGPIP-----DFSGCP-DLRIIHLEDNQLT 476 (824)
Q Consensus 409 ~c~~~~~-~~L~~L~L~~n~l~g~lp~~i~~-----L~~L~~L~L~~N~l~~~~p-----~~~~l~-~L~~L~L~~N~l~ 476 (824)
....... ++|++|+|++|+|++..+..+.. .++|+.|+|++|+|++... .+..++ +|+.|+|++|+|+
T Consensus 101 ~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~ 180 (362)
T 3goz_A 101 VKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLA 180 (362)
T ss_dssp HHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGG
T ss_pred HHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCc
Confidence 0000112 58889999999988665555554 2688999999998885333 244554 8899999999988
Q ss_pred CCCCccccC----C-Cccceeeecccccccc----ccccccc---cceeccccCCc
Q 003385 477 GPLPSSLMN----L-PNLRELYVQNNMLSGT----VPSSLLS---KNVVLNYAGNI 520 (824)
Q Consensus 477 g~lP~~l~~----l-~~L~~L~l~~N~l~g~----ip~~l~~---~~~~l~~~~n~ 520 (824)
+..+..++. + ++|+.|+|++|++++. ++..+.. .+..+.+++|.
T Consensus 181 ~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~ 236 (362)
T 3goz_A 181 SKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNC 236 (362)
T ss_dssp GSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSC
T ss_pred hhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCC
Confidence 666654443 4 5899999999988842 5555533 45667777774
No 390
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=98.95 E-value=4.1e-12 Score=127.80 Aligned_cols=128 Identities=17% Similarity=0.201 Sum_probs=107.1
Q ss_pred cccceeeecccccCCCCCCcccchhhhceeccCCCCCCcHHHHHHHHHhcCCCCcccCCCCCCCCCCCCeeEcCCCCCCc
Q 003385 338 SLPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPS 417 (824)
Q Consensus 338 ~l~~l~~L~L~~n~~s~LPP~i~~le~l~~L~l~~n~~~~~~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~c~~~~~~~ 417 (824)
.+++|+.|+|+.|.++.+| .+..++.|+.|+++.|.+.. .... . ..+++
T Consensus 46 ~l~~L~~L~ls~n~l~~l~-~~~~l~~L~~L~l~~n~l~~-----------l~~~---------------~----~~~~~ 94 (198)
T 1ds9_A 46 TLKACKHLALSTNNIEKIS-SLSGMENLRILSLGRNLIKK-----------IENL---------------D----AVADT 94 (198)
T ss_dssp HTTTCSEEECSEEEESCCC-CHHHHTTCCEEEEEEEEECS-----------CSSH---------------H----HHHHH
T ss_pred cCCCCCEEECCCCCCcccc-ccccCCCCCEEECCCCCccc-----------ccch---------------h----hcCCc
Confidence 4678999999999999998 99999999999999887652 0000 0 11358
Q ss_pred eeEEEecCCCCCccCChhhhcccccccccccccccCCCCC--CCCCCCCcceEeecccccCCCCCcc----------ccC
Q 003385 418 ITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIP--DFSGCPDLRIIHLEDNQLTGPLPSS----------LMN 485 (824)
Q Consensus 418 L~~L~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~p--~~~~l~~L~~L~L~~N~l~g~lP~~----------l~~ 485 (824)
|+.|+|++|++++ +| .+.++++|+.|+|++|+|++.++ .+..+++|+.|+|++|++++.+|.. +..
T Consensus 95 L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~ 172 (198)
T 1ds9_A 95 LEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKR 172 (198)
T ss_dssp CSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHH
T ss_pred CCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHh
Confidence 9999999999995 66 69999999999999999998665 5899999999999999999776653 889
Q ss_pred CCccceeeecccccc
Q 003385 486 LPNLRELYVQNNMLS 500 (824)
Q Consensus 486 l~~L~~L~l~~N~l~ 500 (824)
+++|+.|+ +|.++
T Consensus 173 l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 173 LPNLKKLD--GMPVD 185 (198)
T ss_dssp CSSCSEEC--CGGGT
T ss_pred CCCcEEEC--CcccC
Confidence 99999887 77776
No 391
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=98.89 E-value=1.1e-10 Score=132.67 Aligned_cols=156 Identities=19% Similarity=0.131 Sum_probs=100.5
Q ss_pred cceeeecccccCCCC-----CCcccchhhhceeccCCCCCCcHHHHHHHHHhcCCCCcccCCCCCCCCCCCCeeEcCCCC
Q 003385 340 PFVLSFKFGKTYDSS-----RGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDP 414 (824)
Q Consensus 340 ~~l~~L~L~~n~~s~-----LPP~i~~le~l~~L~l~~n~~~~~~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~c~~~~ 414 (824)
+.|+.|+|+.|.++. +|..+..++.|+.|+++.|.+....+..+.... ...
T Consensus 199 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~------------------------~~~ 254 (461)
T 1z7x_W 199 CQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGL------------------------LHP 254 (461)
T ss_dssp CCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHH------------------------TST
T ss_pred CCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHH------------------------hcC
Confidence 356666666666665 455566666666666666666554444443221 012
Q ss_pred CCceeEEEecCCCCCcc----CChhhhcccccccccccccccCCCCCC-C-----CCCCCcceEeecccccCCC----CC
Q 003385 415 QPSITVIHLSSKNLTGN----IPSDLTKLSSLVELWLDGNSLTGPIPD-F-----SGCPDLRIIHLEDNQLTGP----LP 480 (824)
Q Consensus 415 ~~~L~~L~L~~n~l~g~----lp~~i~~L~~L~~L~L~~N~l~~~~p~-~-----~~l~~L~~L~L~~N~l~g~----lP 480 (824)
.++|+.|+|++|+++.. ++..+.++++|+.|+|++|.+++..+. + ...++|+.|+|++|++++. +|
T Consensus 255 ~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~ 334 (461)
T 1z7x_W 255 SSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFS 334 (461)
T ss_dssp TCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHH
T ss_pred CCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHH
Confidence 35788888888888843 677777788888888888887654332 2 2236788888888888754 56
Q ss_pred ccccCCCccceeeeccccccccccccccc-------cceeccccCC
Q 003385 481 SSLMNLPNLRELYVQNNMLSGTVPSSLLS-------KNVVLNYAGN 519 (824)
Q Consensus 481 ~~l~~l~~L~~L~l~~N~l~g~ip~~l~~-------~~~~l~~~~n 519 (824)
..+..+++|++|+|++|++++..+..+.. .+..+.+++|
T Consensus 335 ~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n 380 (461)
T 1z7x_W 335 SVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADC 380 (461)
T ss_dssp HHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTS
T ss_pred HHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCC
Confidence 66777788888888888887554443332 3455555665
No 392
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=98.88 E-value=1.4e-10 Score=131.70 Aligned_cols=140 Identities=20% Similarity=0.188 Sum_probs=103.1
Q ss_pred ccceeeecccccCCCC-----CCcccchhhhceeccCCCCCCcHHHHHHHHHhcCCCCcccCCCCCCCCCCCCeeEcCCC
Q 003385 339 LPFVLSFKFGKTYDSS-----RGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSD 413 (824)
Q Consensus 339 l~~l~~L~L~~n~~s~-----LPP~i~~le~l~~L~l~~n~~~~~~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~c~~~ 413 (824)
++.|+.|+|+.|.++. +|..+..++.|+.|+++.|.+....+..+..... .
T Consensus 255 ~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~------------------------~ 310 (461)
T 1z7x_W 255 SSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLL------------------------E 310 (461)
T ss_dssp TCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHT------------------------S
T ss_pred CCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhc------------------------c
Confidence 4456666666666666 5555666666666666666665554444443311 1
Q ss_pred CCCceeEEEecCCCCCcc----CChhhhcccccccccccccccCCCCCC-CCC-----CCCcceEeecccccCC----CC
Q 003385 414 PQPSITVIHLSSKNLTGN----IPSDLTKLSSLVELWLDGNSLTGPIPD-FSG-----CPDLRIIHLEDNQLTG----PL 479 (824)
Q Consensus 414 ~~~~L~~L~L~~n~l~g~----lp~~i~~L~~L~~L~L~~N~l~~~~p~-~~~-----l~~L~~L~L~~N~l~g----~l 479 (824)
..++|+.|+|++|++++. +|..+..+++|+.|+|++|++++..+. +.. +++|+.|+|++|+|++ .+
T Consensus 311 ~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l 390 (461)
T 1z7x_W 311 PGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSL 390 (461)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHH
T ss_pred CCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHH
Confidence 224899999999999865 677888889999999999999875442 322 6799999999999996 78
Q ss_pred CccccCCCccceeeecccccccc
Q 003385 480 PSSLMNLPNLRELYVQNNMLSGT 502 (824)
Q Consensus 480 P~~l~~l~~L~~L~l~~N~l~g~ 502 (824)
|..+..+++|++|+|++|++++.
T Consensus 391 ~~~l~~~~~L~~L~l~~N~i~~~ 413 (461)
T 1z7x_W 391 AATLLANHSLRELDLSNNCLGDA 413 (461)
T ss_dssp HHHHHHCCCCCEEECCSSSCCHH
T ss_pred HHHHHhCCCccEEECCCCCCCHH
Confidence 88999999999999999999843
No 393
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=98.87 E-value=8.7e-11 Score=129.60 Aligned_cols=175 Identities=18% Similarity=0.146 Sum_probs=113.9
Q ss_pred ecccccCCCCCCccc-chhhhceeccCCCCCCcHHHH----HHHHHhc-CCCCcccCCCCCCCCCCCCee-EcCCCCCCc
Q 003385 345 FKFGKTYDSSRGPLL-NAMEINKYLERNDGSIDGVAI----VSVISLY-SSADWAQEGGDPCLPVPWSWL-QCNSDPQPS 417 (824)
Q Consensus 345 L~L~~n~~s~LPP~i-~~le~l~~L~l~~n~~~~~~l----~~lk~~~-~~~~w~~~~~dpc~~~~~~~~-~c~~~~~~~ 417 (824)
+.|+.|.++.+.|.+ .....|+.|+++.|.+..... ..++.+. .+..+..+++.-. ...+..+ .+-....++
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~-~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLG-FKNSDELVQILAAIPAN 81 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGG-GSCHHHHHHHHHTSCTT
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCC-HHHHHHHHHHHhccCCC
Confidence 567889999877774 444559999999999887655 4444443 4554433211100 0000000 000011268
Q ss_pred eeEEEecCCCCCccCChhhhcc-----cccccccccccccCCCCCC-----CCC-CCCcceEeecccccCCC----CCcc
Q 003385 418 ITVIHLSSKNLTGNIPSDLTKL-----SSLVELWLDGNSLTGPIPD-----FSG-CPDLRIIHLEDNQLTGP----LPSS 482 (824)
Q Consensus 418 L~~L~L~~n~l~g~lp~~i~~L-----~~L~~L~L~~N~l~~~~p~-----~~~-l~~L~~L~L~~N~l~g~----lP~~ 482 (824)
|++|+|++|++++..+..+..+ ++|+.|+|++|+|++..+. +.. .++|+.|+|++|+|++. ++..
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~ 161 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQI 161 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHH
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHH
Confidence 9999999999987777665554 8899999999999887663 334 36899999999998853 3444
Q ss_pred ccCCC-ccceeeecccccccccccccc-------ccceeccccCCc
Q 003385 483 LMNLP-NLRELYVQNNMLSGTVPSSLL-------SKNVVLNYAGNI 520 (824)
Q Consensus 483 l~~l~-~L~~L~l~~N~l~g~ip~~l~-------~~~~~l~~~~n~ 520 (824)
+..++ +|++|+|++|++++..+..+. ..+..+.+++|.
T Consensus 162 l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~ 207 (362)
T 3goz_A 162 LAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANL 207 (362)
T ss_dssp HHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSC
T ss_pred HhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCC
Confidence 55665 899999999999866554442 244566677774
No 394
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.83 E-value=6.1e-09 Score=114.52 Aligned_cols=140 Identities=16% Similarity=0.304 Sum_probs=104.3
Q ss_pred ccccccCcEEEEEEEEcCCcEEEEEEec--cCC-cccchhhhHHHHHHhhcC--CCccceeeceeecC---CeEEEEEEe
Q 003385 607 KKIGSGGFGVVYYGKLKDGKEIAVKVLT--SNS-YQGKREFTNEVTLLSRIH--HRNLVQFLGYCQEE---GRSVLVYEF 678 (824)
Q Consensus 607 ~~LG~G~fg~Vy~a~~~~g~~vAVK~l~--~~~-~~~~~~~~~Ei~il~~l~--HpnIv~l~~~~~~~---~~~~lV~E~ 678 (824)
+.|+.|.++.||+.+.. ++.+++|+.. ... ......+.+|.++++.+. +..+.+++.++.+. +..++||||
T Consensus 44 ~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme~ 122 (359)
T 3dxp_A 44 EQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIMEF 122 (359)
T ss_dssp EECCC-CCSCEEEEECS-SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEEC
T ss_pred EEcCCcccceEEEEEEC-CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEEe
Confidence 56889999999998866 4678888775 322 123467889999999997 45578888888766 457899999
Q ss_pred cCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCC-------------------------------------
Q 003385 679 MHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGC------------------------------------- 721 (824)
Q Consensus 679 ~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~------------------------------------- 721 (824)
++|..+.+.. ...++..++..++.++++.|..||+..
T Consensus 123 v~G~~l~~~~------~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (359)
T 3dxp_A 123 VSGRVLWDQS------LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPA 196 (359)
T ss_dssp CCCBCCCCTT------CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHH
T ss_pred cCCeecCCCc------cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChH
Confidence 9987764321 123567777889999999999999721
Q ss_pred ------------------CCCeEecCCCCCCEEEcCCCc--EEEEecCCccc
Q 003385 722 ------------------VPAIIHRDLKSSNILLDKHMR--AKVSDFGLSKF 753 (824)
Q Consensus 722 ------------------~~gIvHrDLkp~NILl~~~~~--vkL~DFGla~~ 753 (824)
.+.++|||+++.|||++.++. +.|+||+.+..
T Consensus 197 ~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 197 MDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 147999999999999997753 68999998864
No 395
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.78 E-value=3.4e-09 Score=113.82 Aligned_cols=187 Identities=20% Similarity=0.248 Sum_probs=120.7
Q ss_pred ccccccCcEEEEEEEEcCCcEEEEEEeccCCcccchhhhHHHHHHhhcC-CCc--cceeeceeecCC---eEEEEEEecC
Q 003385 607 KKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIH-HRN--LVQFLGYCQEEG---RSVLVYEFMH 680 (824)
Q Consensus 607 ~~LG~G~fg~Vy~a~~~~g~~vAVK~l~~~~~~~~~~~~~Ei~il~~l~-Hpn--Iv~l~~~~~~~~---~~~lV~E~~~ 680 (824)
+.++.|....||+.. +.+++|+.... .....+.+|.++++.+. +.. +.+++......+ ..++|||+++
T Consensus 26 ~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~ 99 (304)
T 3sg8_A 26 EISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIK 99 (304)
T ss_dssp CEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCC
T ss_pred EecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccC
Confidence 457899999999863 56889986532 23467889999998884 333 344554443332 3478999999
Q ss_pred CCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhC----------------------------------------
Q 003385 681 NGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTG---------------------------------------- 720 (824)
Q Consensus 681 ~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~---------------------------------------- 720 (824)
|.++.+... ..++..++..++.|+++.|..||+.
T Consensus 100 G~~l~~~~~------~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 173 (304)
T 3sg8_A 100 GVPLTPLLL------NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKV 173 (304)
T ss_dssp CEECCHHHH------HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHH
T ss_pred CeECCcccc------ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHH
Confidence 988765332 2355666677788888888888851
Q ss_pred ---------------CCCCeEecCCCCCCEEEcC--CCcEEEEecCCcccccCCCCceeccccCCCCCcchhcccc----
Q 003385 721 ---------------CVPAIIHRDLKSSNILLDK--HMRAKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYIS---- 779 (824)
Q Consensus 721 ---------------~~~gIvHrDLkp~NILl~~--~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~l~~---- 779 (824)
..+.++|+|++|.||++++ +..+.|+||+.+....+ ........... .-..|+....
T Consensus 174 ~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~-~~Dl~~~~~~~-~~~~~~~~~~~l~~ 251 (304)
T 3sg8_A 174 DDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDP-DNDFISLMEDD-EEYGMEFVSKILNH 251 (304)
T ss_dssp HHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECT-THHHHTTCCTT-TSCCHHHHHHHHHH
T ss_pred HHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCCh-HHHHHHHHhhc-cccCHHHHHHHHHH
Confidence 1136899999999999998 45678999998865322 11111100000 0022322111
Q ss_pred -CCC---------CchHHHHHHHHHHHHHHcCCCCCCC
Q 003385 780 -QQL---------TDKSDVYSFGVILLELISGQEAISN 807 (824)
Q Consensus 780 -~~~---------~~~~DIwSlGvil~elltG~~Pf~~ 807 (824)
... ....+.|+++.++|.+.+|..+|..
T Consensus 252 Y~~~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~~~ 289 (304)
T 3sg8_A 252 YKHKDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDWYE 289 (304)
T ss_dssp HTCSCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred cCCCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHH
Confidence 111 1235899999999999999988743
No 396
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=98.78 E-value=9.2e-09 Score=112.78 Aligned_cols=134 Identities=13% Similarity=0.066 Sum_probs=88.6
Q ss_pred eecccccCCCCCCcccchhhhceeccCCCCCCcHHHHHHHHHhcCCCCcccCCCCCCCCCCCCeeEcCCCCCCceeEEEe
Q 003385 344 SFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSITVIHL 423 (824)
Q Consensus 344 ~L~L~~n~~s~LPP~i~~le~l~~L~l~~n~~~~~~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~c~~~~~~~L~~L~L 423 (824)
.++.+++.++.+|..|. +.++.|+|+.|++..+... ...++++|++|+|
T Consensus 13 ~v~C~~~~Lt~iP~~l~--~~l~~L~Ls~N~i~~i~~~-----------------------------~f~~l~~L~~L~L 61 (350)
T 4ay9_X 13 VFLCQESKVTEIPSDLP--RNAIELRFVLTKLRVIQKG-----------------------------AFSGFGDLEKIEI 61 (350)
T ss_dssp EEEEESTTCCSCCTTCC--TTCSEEEEESCCCSEECTT-----------------------------SSTTCTTCCEEEE
T ss_pred EEEecCCCCCccCcCcC--CCCCEEEccCCcCCCcCHH-----------------------------HHcCCCCCCEEEC
Confidence 45667888999988763 5788888888876631000 0134567778888
Q ss_pred cCCCCCccCCh-hhhccccccc-ccccccccCCCCCC-CCCCCCcceEeecccccCCCCCccccCCCccceeeecc-ccc
Q 003385 424 SSKNLTGNIPS-DLTKLSSLVE-LWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQN-NML 499 (824)
Q Consensus 424 ~~n~l~g~lp~-~i~~L~~L~~-L~L~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~L~~L~l~~-N~l 499 (824)
++|++.+.+|. .|.+|++|+. +.+++|+|+.++|+ |.++++|+.|++++|+|++..+..+..+.++..|++.+ |++
T Consensus 62 s~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i 141 (350)
T 4ay9_X 62 SQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINI 141 (350)
T ss_dssp ECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTC
T ss_pred cCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhcccccc
Confidence 88777656654 5667777654 55666777777765 67777888888888877755555666666677777755 445
Q ss_pred cccccccccc
Q 003385 500 SGTVPSSLLS 509 (824)
Q Consensus 500 ~g~ip~~l~~ 509 (824)
. .+|...+.
T Consensus 142 ~-~l~~~~f~ 150 (350)
T 4ay9_X 142 H-TIERNSFV 150 (350)
T ss_dssp C-EECTTSST
T ss_pred c-cccccchh
Confidence 5 66655443
No 397
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.72 E-value=1.3e-09 Score=120.89 Aligned_cols=139 Identities=19% Similarity=0.119 Sum_probs=104.4
Q ss_pred cceeeecccccCCCCC--CcccchhhhceeccCCCCCCcHHHHHHHHHhcCCCCcccCCCCCCCCCCCCeeEcCCCCCCc
Q 003385 340 PFVLSFKFGKTYDSSR--GPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPS 417 (824)
Q Consensus 340 ~~l~~L~L~~n~~s~L--PP~i~~le~l~~L~l~~n~~~~~~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~c~~~~~~~ 417 (824)
+.|+.|+|+.|.++.- .....++..|+.|+|+.|.+.......+...... ..++
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~------------------------~~~~ 156 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLH------------------------DQCQ 156 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHS------------------------TTCC
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHh------------------------cCCc
Confidence 4678888888887653 2335567788888888888877666666554210 1237
Q ss_pred eeEEEecCCCCCc----cCChhhhcccccccccccccccCCCC----C-CCCCCCCcceEeecccccCC----CCCcccc
Q 003385 418 ITVIHLSSKNLTG----NIPSDLTKLSSLVELWLDGNSLTGPI----P-DFSGCPDLRIIHLEDNQLTG----PLPSSLM 484 (824)
Q Consensus 418 L~~L~L~~n~l~g----~lp~~i~~L~~L~~L~L~~N~l~~~~----p-~~~~l~~L~~L~L~~N~l~g----~lP~~l~ 484 (824)
|++|+|++|+|+. .++..+..+++|+.|+|++|+|+... . .+..+++|+.|+|++|+|+. .++..+.
T Consensus 157 L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~ 236 (372)
T 3un9_A 157 ITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAR 236 (372)
T ss_dssp CCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHH
T ss_pred cceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHH
Confidence 9999999999974 35666788999999999999988632 2 36778899999999999984 3445666
Q ss_pred CCCccceeeecccccccc
Q 003385 485 NLPNLRELYVQNNMLSGT 502 (824)
Q Consensus 485 ~l~~L~~L~l~~N~l~g~ 502 (824)
..++|+.|+|++|.|++.
T Consensus 237 ~~~~L~~L~Ls~N~i~~~ 254 (372)
T 3un9_A 237 EHPSLELLHLYFNELSSE 254 (372)
T ss_dssp HCSSCCEEECTTSSCCHH
T ss_pred hCCCCCEEeccCCCCCHH
Confidence 778999999999999843
No 398
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.72 E-value=6.1e-09 Score=113.14 Aligned_cols=94 Identities=21% Similarity=0.281 Sum_probs=80.7
Q ss_pred CCceeEEEecCCCCCccCChhhhcccccccccccccccCCCCCC-CCCCCCcc-eEeecccccCCCCCccccCCCcccee
Q 003385 415 QPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLR-IIHLEDNQLTGPLPSSLMNLPNLREL 492 (824)
Q Consensus 415 ~~~L~~L~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~p~-~~~l~~L~-~L~L~~N~l~g~lP~~l~~l~~L~~L 492 (824)
+++|+.|+|++|+++..-+..|.++++|+.|+|++| ++.+.+. |.+|++|+ .|+|.+ +++..-+.+|.+|++|+.|
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l 302 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYV 302 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEE
T ss_pred cCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEE
Confidence 468999999999999444457999999999999998 7776665 99999999 999998 7774455799999999999
Q ss_pred eeccccccccccccccccc
Q 003385 493 YVQNNMLSGTVPSSLLSKN 511 (824)
Q Consensus 493 ~l~~N~l~g~ip~~l~~~~ 511 (824)
++++|+++ .|+...|...
T Consensus 303 ~l~~n~i~-~I~~~aF~~~ 320 (329)
T 3sb4_A 303 LATGDKIT-TLGDELFGNG 320 (329)
T ss_dssp EECSSCCC-EECTTTTCTT
T ss_pred EeCCCccC-ccchhhhcCC
Confidence 99999999 8988887654
No 399
>2jwp_A Malectin, MGC80075; sugar binding, sugar binding protein; NMR {Xenopus laevis} PDB: 2k46_A* 2kr2_A*
Probab=98.62 E-value=2.7e-08 Score=97.86 Aligned_cols=108 Identities=19% Similarity=0.156 Sum_probs=70.4
Q ss_pred EEEeeecCCCCCCCccCCCCCCCCccccCccccccccccccCCccccccccccCCCCCCCChHHHHhhcccccCCceEEe
Q 003385 193 VSARINFGADSEAPVRYPDDPFDRIWESDSLKKANYLVDVAAGTEKVSTKLPIDLRSDELPPQKVMQTAVVGTNGSLTYR 272 (824)
Q Consensus 193 ~~~r~~~g~~~~~~irypdD~~dR~W~~~~~~~~~~~~~~~~~~~~~st~~~i~~~~~~~pP~~v~qtA~t~~~~sl~~~ 272 (824)
.+.|.|||+.. +. |..+|.|++|......... ..... .+.....+..|..|+|||=... .+++|.
T Consensus 6 ~~~~INcGg~~---~~---d~~gr~w~~D~~~~~~g~~------~~~~~--~~~~~~~~~~~~~lY~TaR~~~-~~~tY~ 70 (174)
T 2jwp_A 6 VIWAVNAGGES---HV---DVHGIHYRKDPLEGRVGRA------SDYGM--KLPILRSNPEDQVLYQTERYNE-DSFGYD 70 (174)
T ss_dssp EEEEEEETSSS---EE---ETTTEEECSSCSSTTCCCC------CCCCT--TSCCSSSCHHHHHTTTCCCCCC-SCEEEE
T ss_pred EEEEEECCCCC---cc---CCCCCEEcCCcCcccCCcc------ccccc--ceEecccCCCCchhhhhhccCC-CCeEEE
Confidence 45699999842 22 6789999998542211100 00001 1111223456899999997643 467888
Q ss_pred ecCCCCCCcceeEEeeccccCCCCCcceEEEEEECCCcCcccccc
Q 003385 273 LNLDGFPGFGWAVTYFAEIEDLDPDESRKFRLVLPGQPDVSKAIV 317 (824)
Q Consensus 273 ~~~~~~~~~~y~~~yFae~~~~~~~~~R~F~i~in~~~~~~~~~~ 317 (824)
.+++.. ..+.+-|||+|+.. ...+.|+|||++||+...++..+
T Consensus 71 f~v~~~-G~Y~VrLhF~ei~~-~~~~~rvFdV~ing~~~l~~fdi 113 (174)
T 2jwp_A 71 IPIKEE-GEYVLVLKFAEVYF-AQSQQKVFDVRVNGHTVVKDLDI 113 (174)
T ss_dssp EECCSC-EEEEEEEEEECCSC-CCSSSSCEEEEETTEEEEEEECH
T ss_pred EEeCCC-eEEEEEEEEecccc-CCCCCeEeEEEECCEEeecCcCH
Confidence 887543 34457999999974 45789999999999987776554
No 400
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.61 E-value=2.1e-09 Score=119.02 Aligned_cols=155 Identities=16% Similarity=0.124 Sum_probs=113.6
Q ss_pred cccceeeecccccCCCCCCcc-cchh-----hhceeccCCCCCCcHHHHHHHHHhcCCCCcccCCCCCCCCCCCCeeEcC
Q 003385 338 SLPFVLSFKFGKTYDSSRGPL-LNAM-----EINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCN 411 (824)
Q Consensus 338 ~l~~l~~L~L~~n~~s~LPP~-i~~l-----e~l~~L~l~~n~~~~~~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~c~ 411 (824)
.++.|+.|+|+.|.++..... |..+ +.|+.|+|+.|.+....+..+...
T Consensus 70 ~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~------------------------- 124 (372)
T 3un9_A 70 VLSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPV------------------------- 124 (372)
T ss_dssp HHTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHH-------------------------
T ss_pred HHhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHH-------------------------
Confidence 356788999999998875544 4444 689999999999877655544332
Q ss_pred CCCCCceeEEEecCCCCCccCChhhh-----cccccccccccccccCCCC-----CCCCCCCCcceEeecccccCC----
Q 003385 412 SDPQPSITVIHLSSKNLTGNIPSDLT-----KLSSLVELWLDGNSLTGPI-----PDFSGCPDLRIIHLEDNQLTG---- 477 (824)
Q Consensus 412 ~~~~~~L~~L~L~~n~l~g~lp~~i~-----~L~~L~~L~L~~N~l~~~~-----p~~~~l~~L~~L~L~~N~l~g---- 477 (824)
+++|+.|+|++|+|+..-...+. ..++|+.|+|++|.|+... ..+..+++|++|+|++|+|+.
T Consensus 125 ---L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~ 201 (372)
T 3un9_A 125 ---FLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLE 201 (372)
T ss_dssp ---HHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHH
T ss_pred ---HHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHH
Confidence 23689999999999855444443 3578999999999997622 235778999999999999984
Q ss_pred CCCccccCCCccceeeecccccccc----ccccc--cccceeccccCCc
Q 003385 478 PLPSSLMNLPNLRELYVQNNMLSGT----VPSSL--LSKNVVLNYAGNI 520 (824)
Q Consensus 478 ~lP~~l~~l~~L~~L~l~~N~l~g~----ip~~l--~~~~~~l~~~~n~ 520 (824)
.+++.+..+++|+.|+|++|.+++. ++..+ ...+..+++++|.
T Consensus 202 ~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~ 250 (372)
T 3un9_A 202 LLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNE 250 (372)
T ss_dssp HHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSS
T ss_pred HHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCC
Confidence 2466778889999999999999843 22222 2334667777774
No 401
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.39 E-value=1.1e-07 Score=99.75 Aligned_cols=78 Identities=24% Similarity=0.332 Sum_probs=47.8
Q ss_pred CCceeEEEecCCCCCc--cCChhhhcccccccccccccccCCCCCCCCCCC--CcceEeecccccCCCCCc-------cc
Q 003385 415 QPSITVIHLSSKNLTG--NIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCP--DLRIIHLEDNQLTGPLPS-------SL 483 (824)
Q Consensus 415 ~~~L~~L~L~~n~l~g--~lp~~i~~L~~L~~L~L~~N~l~~~~p~~~~l~--~L~~L~L~~N~l~g~lP~-------~l 483 (824)
+++|+.|+|++|+|++ .+|..+..|++|+.|+|++|+|++. .++..++ +|+.|+|++|.|.+.+|+ .+
T Consensus 169 l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~-~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il 247 (267)
T 3rw6_A 169 IPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE-RELDKIKGLKLEELWLDGNSLCDTFRDQSTYISAIR 247 (267)
T ss_dssp CTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG-GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHH
T ss_pred CCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc-hhhhhcccCCcceEEccCCcCccccCcchhHHHHHH
Confidence 4567777777777775 4456666677777777777777665 2222222 666777777776665552 25
Q ss_pred cCCCccceee
Q 003385 484 MNLPNLRELY 493 (824)
Q Consensus 484 ~~l~~L~~L~ 493 (824)
..+++|+.||
T Consensus 248 ~~~P~L~~LD 257 (267)
T 3rw6_A 248 ERFPKLLRLD 257 (267)
T ss_dssp HHCTTCCEES
T ss_pred HHCcccCeEC
Confidence 5566666554
No 402
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.35 E-value=4.5e-07 Score=98.28 Aligned_cols=78 Identities=18% Similarity=0.092 Sum_probs=57.2
Q ss_pred ccccccccccccccCCCCCC-CCCCCCcceEeecccccCCCCCccccCCCccc-eeeeccccccccccccccccc---ee
Q 003385 439 LSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLR-ELYVQNNMLSGTVPSSLLSKN---VV 513 (824)
Q Consensus 439 L~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~L~-~L~l~~N~l~g~ip~~l~~~~---~~ 513 (824)
+++|+.|+|++|+++.+++. |.+|++|+.|+|.+| ++..-+.+|.++++|+ .|++.+ .++ .|+...|... ..
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~-~I~~~aF~~c~~L~~ 301 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVT-AIEFGAFMGCDNLRY 301 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCC-EECTTTTTTCTTEEE
T ss_pred cCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cce-EEchhhhhCCccCCE
Confidence 67888888888888877775 888888888888887 6634445788888888 888877 777 7777776543 34
Q ss_pred ccccCC
Q 003385 514 LNYAGN 519 (824)
Q Consensus 514 l~~~~n 519 (824)
+.+.+|
T Consensus 302 l~l~~n 307 (329)
T 3sb4_A 302 VLATGD 307 (329)
T ss_dssp EEECSS
T ss_pred EEeCCC
Confidence 444444
No 403
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.35 E-value=1.5e-08 Score=118.78 Aligned_cols=163 Identities=15% Similarity=0.100 Sum_probs=88.5
Q ss_pred ccceeeeccc-----------ccCCCC--CCcccchhhhceeccCCCCCCcHHHHHHHHH-hcCCCCcccCCCCCCCCCC
Q 003385 339 LPFVLSFKFG-----------KTYDSS--RGPLLNAMEINKYLERNDGSIDGVAIVSVIS-LYSSADWAQEGGDPCLPVP 404 (824)
Q Consensus 339 l~~l~~L~L~-----------~n~~s~--LPP~i~~le~l~~L~l~~n~~~~~~l~~lk~-~~~~~~w~~~~~dpc~~~~ 404 (824)
+++|+.|+|. .|.++. ++.....+..|+.|+++.|.+....+..+.. ...+..+.....+-|....
T Consensus 341 ~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~ 420 (592)
T 3ogk_B 341 CKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERIT 420 (592)
T ss_dssp CTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCS
T ss_pred CCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCcccc
Confidence 4567777777 345543 3333555777777777777777666666655 3333333221111111100
Q ss_pred C----CeeEcCCCCCCceeEEEecCC--CCCccCChhhhc-ccccccccccccccCC-CCCC-CCCCCCcceEeeccccc
Q 003385 405 W----SWLQCNSDPQPSITVIHLSSK--NLTGNIPSDLTK-LSSLVELWLDGNSLTG-PIPD-FSGCPDLRIIHLEDNQL 475 (824)
Q Consensus 405 ~----~~~~c~~~~~~~L~~L~L~~n--~l~g~lp~~i~~-L~~L~~L~L~~N~l~~-~~p~-~~~l~~L~~L~L~~N~l 475 (824)
. .++......+++|+.|+|+++ .+++..+..++. +++|+.|+|++|++++ .++. +.++++|+.|+|++|+|
T Consensus 421 ~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l 500 (592)
T 3ogk_B 421 DLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCF 500 (592)
T ss_dssp SCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCC
T ss_pred CchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCC
Confidence 0 011100112456777777643 355555555544 6677777777777665 2333 45667777777777776
Q ss_pred CCC-CCccccCCCccceeeeccccccc
Q 003385 476 TGP-LPSSLMNLPNLRELYVQNNMLSG 501 (824)
Q Consensus 476 ~g~-lP~~l~~l~~L~~L~l~~N~l~g 501 (824)
++. ++..+..+++|+.|+|++|++++
T Consensus 501 ~~~~~~~~~~~l~~L~~L~ls~n~it~ 527 (592)
T 3ogk_B 501 SERAIAAAVTKLPSLRYLWVQGYRASM 527 (592)
T ss_dssp BHHHHHHHHHHCSSCCEEEEESCBCCT
T ss_pred cHHHHHHHHHhcCccCeeECcCCcCCH
Confidence 543 33444566777777777777663
No 404
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.30 E-value=1.6e-06 Score=93.64 Aligned_cols=181 Identities=15% Similarity=0.222 Sum_probs=116.0
Q ss_pred ccccccCcEEEEEEEEcCCcEEEEEEeccCCcccchhhhHHHHHHhhcCC----CccceeeceeecCCeEEEEEEecCCC
Q 003385 607 KKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHH----RNLVQFLGYCQEEGRSVLVYEFMHNG 682 (824)
Q Consensus 607 ~~LG~G~fg~Vy~a~~~~g~~vAVK~l~~~~~~~~~~~~~Ei~il~~l~H----pnIv~l~~~~~~~~~~~lV~E~~~~g 682 (824)
+.++.|..+.||+. ++.+++|+..... ....+.+|.++++.+.+ ..+.+++++ +..++||||++|.
T Consensus 43 ~~l~~G~~n~vy~v----g~~~vlR~~~~~~--~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme~i~G~ 112 (320)
T 3r70_A 43 RYLSSGDDSDTFLC----NEQYVVKVPKRDS--VRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMKYIKGE 112 (320)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEESSHH--HHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEECCCCB
T ss_pred EeCCCCCCceEEEE----CCEEEEEeCCcHH--HHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEeecCCc
Confidence 56889999999988 6788999864322 23458899999988866 223445544 4558999999998
Q ss_pred CHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCC----------------------------------------
Q 003385 683 TLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCV---------------------------------------- 722 (824)
Q Consensus 683 sL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~---------------------------------------- 722 (824)
++..... ..++..++..++.+++..|..||+...
T Consensus 113 ~l~~~~~------~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (320)
T 3r70_A 113 RITYEQY------HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDEML 186 (320)
T ss_dssp CCCHHHH------TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHHHH
T ss_pred ccccccc------ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccccccch
Confidence 8764321 224555566677777777777774321
Q ss_pred --------------------CCeEecCCCCCCEEEcCCCcEEEEecCCcccccCCCCceeccccCCCCCcchhcccc---
Q 003385 723 --------------------PAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYIS--- 779 (824)
Q Consensus 723 --------------------~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~l~~--- 779 (824)
+.++|+|++|.|||++.+..+.|+||+.+....+. ...............||....
T Consensus 187 ~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~~~~-~Dl~~~~~~~~~~~~~~~~~~~l~ 265 (320)
T 3r70_A 187 EHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVGDPD-NDFLCLLDCSTDDFGKEFGRKVLK 265 (320)
T ss_dssp HHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEECGG-GGGHHHHSCCTTSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccCCHH-HHHHHHHHhcccccCHHHHHHHHH
Confidence 24599999999999998666799999988654322 111111111111234443321
Q ss_pred --CC-----CCchHHHHHHHHHHHHHHcCCCC
Q 003385 780 --QQ-----LTDKSDVYSFGVILLELISGQEA 804 (824)
Q Consensus 780 --~~-----~~~~~DIwSlGvil~elltG~~P 804 (824)
.. .....+.|..-..+.+++.|..-
T Consensus 266 ~Y~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~ 297 (320)
T 3r70_A 266 YYQHKAPEVAERKAELNDVYWSIDQIIYGYER 297 (320)
T ss_dssp HTTCSCHHHHHHHHHHHHHTHHHHHHHSSCTT
T ss_pred HHhccCcHHHHHHHHHHHHHhHHHHHHHHHHc
Confidence 11 12356778655568888888553
No 405
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.24 E-value=4.1e-06 Score=89.13 Aligned_cols=74 Identities=20% Similarity=0.212 Sum_probs=59.2
Q ss_pred ccccccCcEEEEEEEEcCCcEEEEEEeccCCcccchhhhHHHHHHhhcCCC---ccceeeceeecCCeEEEEEEecCCCC
Q 003385 607 KKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHR---NLVQFLGYCQEEGRSVLVYEFMHNGT 683 (824)
Q Consensus 607 ~~LG~G~fg~Vy~a~~~~g~~vAVK~l~~~~~~~~~~~~~Ei~il~~l~Hp---nIv~l~~~~~~~~~~~lV~E~~~~gs 683 (824)
+.|+.|.++.||+++..+|+.++||+...........+.+|++.|+.+.+. .+.+++++. ..++||||++++.
T Consensus 21 ~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g~~ 96 (288)
T 3d1u_A 21 AERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDERP 96 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCCCC
T ss_pred eeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEecccCC
Confidence 568999999999999888999999997543333346789999999999875 477777763 2589999999886
Q ss_pred H
Q 003385 684 L 684 (824)
Q Consensus 684 L 684 (824)
+
T Consensus 97 ~ 97 (288)
T 3d1u_A 97 P 97 (288)
T ss_dssp C
T ss_pred C
Confidence 4
No 406
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.13 E-value=9.6e-06 Score=86.99 Aligned_cols=136 Identities=20% Similarity=0.246 Sum_probs=90.7
Q ss_pred ccccccCcEEEEEEEEcCCcEEEEEEeccCCcccchhhhHHHHHHhhcCCC---ccceeeceee-cCCeEEEEEEecCCC
Q 003385 607 KKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHR---NLVQFLGYCQ-EEGRSVLVYEFMHNG 682 (824)
Q Consensus 607 ~~LG~G~fg~Vy~a~~~~g~~vAVK~l~~~~~~~~~~~~~Ei~il~~l~Hp---nIv~l~~~~~-~~~~~~lV~E~~~~g 682 (824)
+.++.|....||+. ++.+++|+-+. ......+.+|.++|+.+.+. .+.+.+.+.. ..+..++|||+++|.
T Consensus 25 ~~l~~G~~n~v~~v----g~~~VlR~~~~--~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~ 98 (306)
T 3tdw_A 25 ESLGEGFRNYAILV----NGDWVFRFPKS--QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQ 98 (306)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSE
T ss_pred eecCCCcceeEEEE----CCEEEEEecCC--chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCe
Confidence 45788888899987 67788998532 22346788999999999753 3556666663 445678999999998
Q ss_pred CHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhC------------------------------------------
Q 003385 683 TLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTG------------------------------------------ 720 (824)
Q Consensus 683 sL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~------------------------------------------ 720 (824)
++.+.... .++..+...++.++++.|..||+.
T Consensus 99 ~l~~~~~~------~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l 172 (306)
T 3tdw_A 99 ILGEDGMA------VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYL 172 (306)
T ss_dssp ECHHHHHT------TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHH
T ss_pred ECchhhhh------hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHH
Confidence 87653211 122233333444444444444431
Q ss_pred ---------------CCCCeEecCCCCCCEEEcC---CCc-EEEEecCCcccc
Q 003385 721 ---------------CVPAIIHRDLKSSNILLDK---HMR-AKVSDFGLSKFA 754 (824)
Q Consensus 721 ---------------~~~gIvHrDLkp~NILl~~---~~~-vkL~DFGla~~~ 754 (824)
..+.++|+|+++.|||++. ++. +.|+||+.+...
T Consensus 173 ~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~g 225 (306)
T 3tdw_A 173 TLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAIS 225 (306)
T ss_dssp HHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEE
T ss_pred HHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCC
Confidence 1236799999999999997 455 489999987643
No 407
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.12 E-value=3e-07 Score=107.55 Aligned_cols=159 Identities=13% Similarity=0.063 Sum_probs=82.7
Q ss_pred cccceeeecccccCCCCCCcc-cchh--hhceeccCCCCC-CcHHHHHHHH-HhcCCCCcccCCCCCCCCCCCCeeEcCC
Q 003385 338 SLPFVLSFKFGKTYDSSRGPL-LNAM--EINKYLERNDGS-IDGVAIVSVI-SLYSSADWAQEGGDPCLPVPWSWLQCNS 412 (824)
Q Consensus 338 ~l~~l~~L~L~~n~~s~LPP~-i~~l--e~l~~L~l~~n~-~~~~~l~~lk-~~~~~~~w~~~~~dpc~~~~~~~~~c~~ 412 (824)
.+++|+.|+|+.|.++...+. +..+ ..|+.|+++.+. .....+..+. ....++.+...... -......|+....
T Consensus 110 ~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~-~~~~~~~~l~~~~ 188 (592)
T 3ogk_B 110 NLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESS-FSEKDGKWLHELA 188 (592)
T ss_dssp HCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCE-EECCCSHHHHHHH
T ss_pred hCCCCCeEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECcccc-ccCcchhHHHHHH
Confidence 467788888888876654333 5443 348888887665 4444444443 22334433221110 0000111111111
Q ss_pred CCCCceeEEEecCCCCC----ccCChhhhcccccccccccccccCCCCCCCCCCCCcceEeecccccC---CCCCccccC
Q 003385 413 DPQPSITVIHLSSKNLT----GNIPSDLTKLSSLVELWLDGNSLTGPIPDFSGCPDLRIIHLEDNQLT---GPLPSSLMN 485 (824)
Q Consensus 413 ~~~~~L~~L~L~~n~l~----g~lp~~i~~L~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~---g~lP~~l~~ 485 (824)
..+++|+.|+|++|+++ +.++..+.++++|+.|+|++|.+.+.+..+.++++|+.|+++.+... +..+..++.
T Consensus 189 ~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~ 268 (592)
T 3ogk_B 189 QHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILELVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVF 268 (592)
T ss_dssp HHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGGGHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCC
T ss_pred hcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHHHHHHHhhhhHHHhhcccccccccchHHHHHHhhc
Confidence 23457777777777776 34555566777777777777777664434555566666666542222 122334444
Q ss_pred CCccceeeeccc
Q 003385 486 LPNLRELYVQNN 497 (824)
Q Consensus 486 l~~L~~L~l~~N 497 (824)
+++|+.|+++++
T Consensus 269 ~~~L~~L~l~~~ 280 (592)
T 3ogk_B 269 PRKLCRLGLSYM 280 (592)
T ss_dssp CTTCCEEEETTC
T ss_pred cccccccCcccc
Confidence 444555444443
No 408
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.10 E-value=4.3e-07 Score=95.28 Aligned_cols=81 Identities=23% Similarity=0.348 Sum_probs=64.3
Q ss_pred EEecCCCCCccCCh----hhhcccccccccccccccCCCC--CC-CCCCCCcceEeecccccCCCCCccccCCC--ccce
Q 003385 421 IHLSSKNLTGNIPS----DLTKLSSLVELWLDGNSLTGPI--PD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLP--NLRE 491 (824)
Q Consensus 421 L~L~~n~l~g~lp~----~i~~L~~L~~L~L~~N~l~~~~--p~-~~~l~~L~~L~L~~N~l~g~lP~~l~~l~--~L~~ 491 (824)
++++.|+.. .++. ...+|++|+.|+|++|+|+++. |. +..+++|+.|+|++|+|++. +.+..+. +|++
T Consensus 148 l~l~~N~~~-~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~ 224 (267)
T 3rw6_A 148 IDVVLNRRS-CMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEE 224 (267)
T ss_dssp CCCCTTSHH-HHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSE
T ss_pred ccccCCHHH-HHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcce
Confidence 566777544 3333 3367899999999999999954 44 57899999999999999954 4466666 9999
Q ss_pred eeecccccccccc
Q 003385 492 LYVQNNMLSGTVP 504 (824)
Q Consensus 492 L~l~~N~l~g~ip 504 (824)
|+|++|++++.+|
T Consensus 225 L~L~~Npl~~~~~ 237 (267)
T 3rw6_A 225 LWLDGNSLCDTFR 237 (267)
T ss_dssp EECTTSTTGGGCS
T ss_pred EEccCCcCccccC
Confidence 9999999998777
No 409
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.07 E-value=7.2e-06 Score=89.65 Aligned_cols=79 Identities=4% Similarity=0.047 Sum_probs=55.8
Q ss_pred ccc-cccCcEEEEEEEEc-------CCcEEEEEEeccCC---cccchhhhHHHHHHhhcCC---CccceeeceeecC---
Q 003385 607 KKI-GSGGFGVVYYGKLK-------DGKEIAVKVLTSNS---YQGKREFTNEVTLLSRIHH---RNLVQFLGYCQEE--- 669 (824)
Q Consensus 607 ~~L-G~G~fg~Vy~a~~~-------~g~~vAVK~l~~~~---~~~~~~~~~Ei~il~~l~H---pnIv~l~~~~~~~--- 669 (824)
+.| +.|....+|+.... +++.+++|+..... ......+.+|+.+++.+.. -.+.+++.++.+.
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 456 78888999988754 26788999865432 1123567889999988853 3467788777654
Q ss_pred CeEEEEEEecCCCCHH
Q 003385 670 GRSVLVYEFMHNGTLK 685 (824)
Q Consensus 670 ~~~~lV~E~~~~gsL~ 685 (824)
+..++|||+++|..+.
T Consensus 106 g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPP 121 (357)
T ss_dssp SSCEEEEECCCCBCCC
T ss_pred CCceEEEEecCCCChh
Confidence 3568999999986654
No 410
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.07 E-value=9.4e-08 Score=111.90 Aligned_cols=180 Identities=15% Similarity=0.040 Sum_probs=93.7
Q ss_pred cccceeeecccccCCCC--CCcccchhhhceeccCCCCCCcHHHHHHHHH-hcCCCCcccCCC-----CCCCCCCCCeeE
Q 003385 338 SLPFVLSFKFGKTYDSS--RGPLLNAMEINKYLERNDGSIDGVAIVSVIS-LYSSADWAQEGG-----DPCLPVPWSWLQ 409 (824)
Q Consensus 338 ~l~~l~~L~L~~n~~s~--LPP~i~~le~l~~L~l~~n~~~~~~l~~lk~-~~~~~~w~~~~~-----dpc~~~~~~~~~ 409 (824)
.+++|+.|+|+.|.++. ++..+..++.|+.|+++.| +....+..+.. ...++.+..... ..|......++.
T Consensus 287 ~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~ 365 (594)
T 2p1m_B 287 VCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLV 365 (594)
T ss_dssp HHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHH
T ss_pred hhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHH
Confidence 46788899998888664 2333667888888888877 44444554443 233444322110 112111111110
Q ss_pred cCCCCCCceeEEEecCCCCCccCChhhh-ccccccccccc--c----cccCCCCCC------CCCCCCcceEeecccccC
Q 003385 410 CNSDPQPSITVIHLSSKNLTGNIPSDLT-KLSSLVELWLD--G----NSLTGPIPD------FSGCPDLRIIHLEDNQLT 476 (824)
Q Consensus 410 c~~~~~~~L~~L~L~~n~l~g~lp~~i~-~L~~L~~L~L~--~----N~l~~~~p~------~~~l~~L~~L~L~~N~l~ 476 (824)
.-...+++|+.|++..|++++..+..+. .+++|+.|+|+ + |++++.+.+ +.++++|+.|+|++ .++
T Consensus 366 ~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~ 444 (594)
T 2p1m_B 366 SVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLT 444 (594)
T ss_dssp HHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCC
T ss_pred HHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-ccc
Confidence 0001135677777777777655555554 46777777776 3 455533221 34456666666655 444
Q ss_pred CCCCccccC-CCccceeeeccccccccccccc---cccceeccccCC
Q 003385 477 GPLPSSLMN-LPNLRELYVQNNMLSGTVPSSL---LSKNVVLNYAGN 519 (824)
Q Consensus 477 g~lP~~l~~-l~~L~~L~l~~N~l~g~ip~~l---~~~~~~l~~~~n 519 (824)
+..+..++. +++|+.|+|++|.+++..+..+ +..+..+.+++|
T Consensus 445 ~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n 491 (594)
T 2p1m_B 445 DKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDC 491 (594)
T ss_dssp HHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESC
T ss_pred HHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCC
Confidence 444444444 5566666666666654433333 233444444444
No 411
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.03 E-value=1.1e-06 Score=96.74 Aligned_cols=86 Identities=20% Similarity=0.333 Sum_probs=44.9
Q ss_pred CceeEEEecCCCCCccCChhhh--cccccccccccc--cccCCC------CCCC--CCCCCcceEeecccccCCCCCccc
Q 003385 416 PSITVIHLSSKNLTGNIPSDLT--KLSSLVELWLDG--NSLTGP------IPDF--SGCPDLRIIHLEDNQLTGPLPSSL 483 (824)
Q Consensus 416 ~~L~~L~L~~n~l~g~lp~~i~--~L~~L~~L~L~~--N~l~~~------~p~~--~~l~~L~~L~L~~N~l~g~lP~~l 483 (824)
++|+.|+|..++++...-..+. .|++|+.|+|+. |...+. -+.+ ..+++|+.|+|++|++....+..+
T Consensus 193 ~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~l 272 (362)
T 2ra8_A 193 PNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMF 272 (362)
T ss_dssp TTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHH
T ss_pred CCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHH
Confidence 4666666666665533333343 566666666642 221111 1112 235667777776666653333223
Q ss_pred c---CCCccceeeeccccccc
Q 003385 484 M---NLPNLRELYVQNNMLSG 501 (824)
Q Consensus 484 ~---~l~~L~~L~l~~N~l~g 501 (824)
. .+++|+.|+|+.|.|.+
T Consensus 273 a~a~~~~~L~~LdLs~n~L~d 293 (362)
T 2ra8_A 273 LESDILPQLETMDISAGVLTD 293 (362)
T ss_dssp HHCSSGGGCSEEECCSSCCBH
T ss_pred HhCccCCCCCEEECCCCCCCh
Confidence 2 45667777777666664
No 412
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.02 E-value=1.9e-05 Score=82.54 Aligned_cols=135 Identities=17% Similarity=0.122 Sum_probs=94.7
Q ss_pred cccccCcE-EEEEEEEc-CCcEEEEEEeccCCcccchhhhHHHHHHhhcC-CCccceeeceeecCCeEEEEEEecCCCCH
Q 003385 608 KIGSGGFG-VVYYGKLK-DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIH-HRNLVQFLGYCQEEGRSVLVYEFMHNGTL 684 (824)
Q Consensus 608 ~LG~G~fg-~Vy~a~~~-~g~~vAVK~l~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~~~lV~E~~~~gsL 684 (824)
.+..|..| .||+.... ++..+++|+-... ....+.+|...|+.+. +--+.++++++.+.+..++|||+++|.++
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~ 107 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTA 107 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEH
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccc
Confidence 34445554 68987755 4667899986532 2456888999998885 33367888888888999999999999887
Q ss_pred HHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCC-------------------------------------------
Q 003385 685 KEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGC------------------------------------------- 721 (824)
Q Consensus 685 ~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~------------------------------------------- 721 (824)
.+..... ......+..+++..|..||+..
T Consensus 108 ~~~~~~~--------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (272)
T 4gkh_A 108 FQVLEEY--------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQV 179 (272)
T ss_dssp HHHHHHC--------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHH
T ss_pred cccccCC--------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHH
Confidence 6654211 0112235556666666666311
Q ss_pred ------------CCCeEecCCCCCCEEEcCCCcEEEEecCCccc
Q 003385 722 ------------VPAIIHRDLKSSNILLDKHMRAKVSDFGLSKF 753 (824)
Q Consensus 722 ------------~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~ 753 (824)
.+.++|+|+.+.|||++.++.+-|+||+.+..
T Consensus 180 ~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 180 WKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp HHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 12479999999999999877777999998754
No 413
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=97.99 E-value=1.3e-06 Score=86.67 Aligned_cols=119 Identities=10% Similarity=0.095 Sum_probs=90.2
Q ss_pred cccchhhhceeccCCCC-CCcHHHHHHHHHhcCCCCcccCCCCCCCCCCCCeeEcCCCCCCceeEEEecCCCCCc----c
Q 003385 357 PLLNAMEINKYLERNDG-SIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSITVIHLSSKNLTG----N 431 (824)
Q Consensus 357 P~i~~le~l~~L~l~~n-~~~~~~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~c~~~~~~~L~~L~L~~n~l~g----~ 431 (824)
..+...+.|+.|+|+.| .+.......+...... .++|++|+|++|+|.. .
T Consensus 30 ~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~-------------------------~~~L~~L~Ls~n~i~~~g~~~ 84 (185)
T 1io0_A 30 RIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKT-------------------------NTYVKKFSIVGTRSNDPVAFA 84 (185)
T ss_dssp HHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTT-------------------------CCSCCEEECTTSCCCHHHHHH
T ss_pred HHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHh-------------------------CCCcCEEECcCCCCChHHHHH
Confidence 34555677888999988 8888777776655211 1368999999999974 2
Q ss_pred CChhhhcccccccccccccccCCC-----CCCCCCCCCcceEee--cccccCCC----CCccccCCCccceeeecccccc
Q 003385 432 IPSDLTKLSSLVELWLDGNSLTGP-----IPDFSGCPDLRIIHL--EDNQLTGP----LPSSLMNLPNLRELYVQNNMLS 500 (824)
Q Consensus 432 lp~~i~~L~~L~~L~L~~N~l~~~-----~p~~~~l~~L~~L~L--~~N~l~g~----lP~~l~~l~~L~~L~l~~N~l~ 500 (824)
+...+...++|+.|+|++|+|+.. ...+...++|+.|+| ++|+|... +.+.+...++|++|+|++|.+.
T Consensus 85 l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 85 LAEMLKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHhCCCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 455666778999999999999863 334777889999999 88999843 4455666689999999999986
No 414
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=97.96 E-value=2.2e-05 Score=86.38 Aligned_cols=72 Identities=10% Similarity=0.118 Sum_probs=54.5
Q ss_pred ccccccCcEEEEEEEEcCCcEEEEEEeccCCcccchhhhHHHHHHhhcCCCc--cceeeceeecC-CeEEEEEEecCCCC
Q 003385 607 KKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRN--LVQFLGYCQEE-GRSVLVYEFMHNGT 683 (824)
Q Consensus 607 ~~LG~G~fg~Vy~a~~~~g~~vAVK~l~~~~~~~~~~~~~Ei~il~~l~Hpn--Iv~l~~~~~~~-~~~~lV~E~~~~gs 683 (824)
+.++.|....+|+.+. +++.+++|+.... ..+.+|..+++.+.... +.+++.++... +..++||||++|.+
T Consensus 47 ~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G~~ 120 (362)
T 3ovc_A 47 MQLSEGEESRAFSFDV-GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQGVT 120 (362)
T ss_dssp EEEEECSSEEEEEEEE-TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCSEE
T ss_pred EECCCCCcceEEEEEE-CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCCCC
Confidence 4678899999999875 4788999987432 35888999999987544 45677666554 56899999999765
Q ss_pred H
Q 003385 684 L 684 (824)
Q Consensus 684 L 684 (824)
+
T Consensus 121 l 121 (362)
T 3ovc_A 121 L 121 (362)
T ss_dssp T
T ss_pred c
Confidence 4
No 415
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=97.82 E-value=1.5e-06 Score=101.71 Aligned_cols=37 Identities=22% Similarity=0.314 Sum_probs=26.1
Q ss_pred CCCCcceEeecccccCCCCC-ccccCCCccceeeeccc
Q 003385 461 GCPDLRIIHLEDNQLTGPLP-SSLMNLPNLRELYVQNN 497 (824)
Q Consensus 461 ~l~~L~~L~L~~N~l~g~lP-~~l~~l~~L~~L~l~~N 497 (824)
.+++|+.|+|++|.+++..+ ..+.++++|+.|++++|
T Consensus 287 ~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~ 324 (594)
T 2p1m_B 287 VCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY 324 (594)
T ss_dssp HHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG
T ss_pred hhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc
Confidence 56788888888888664322 23567788888888877
No 416
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.78 E-value=7e-05 Score=83.13 Aligned_cols=74 Identities=15% Similarity=0.119 Sum_probs=48.6
Q ss_pred ccccccCcEEEEEEEEc-CCcEEEEEEeccCCc-------ccchhhhHHHHHHhhcCC--Cc-cceeeceeecCCeEEEE
Q 003385 607 KKIGSGGFGVVYYGKLK-DGKEIAVKVLTSNSY-------QGKREFTNEVTLLSRIHH--RN-LVQFLGYCQEEGRSVLV 675 (824)
Q Consensus 607 ~~LG~G~fg~Vy~a~~~-~g~~vAVK~l~~~~~-------~~~~~~~~Ei~il~~l~H--pn-Iv~l~~~~~~~~~~~lV 675 (824)
+.||.|..+.||+++.. +++.++||....... .....+..|.++++.+.+ |. +.+++.+ +.+..++|
T Consensus 36 ~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~lv 113 (397)
T 2olc_A 36 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVTV 113 (397)
T ss_dssp EECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEEE
T ss_pred EECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEEE
Confidence 57899999999999754 468899998653211 123456789999988742 33 3455543 33445899
Q ss_pred EEecCCC
Q 003385 676 YEFMHNG 682 (824)
Q Consensus 676 ~E~~~~g 682 (824)
||++++.
T Consensus 114 mE~l~g~ 120 (397)
T 2olc_A 114 MEDLSHL 120 (397)
T ss_dssp ECCCTTS
T ss_pred EEeCCCc
Confidence 9999763
No 417
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.76 E-value=0.0001 Score=79.41 Aligned_cols=141 Identities=16% Similarity=0.244 Sum_probs=79.8
Q ss_pred cccccCcEEEEEEEEcCCcEEEEEEeccCCcccchhhhHHHHHHhhcCC--Cccceeec------eeecCCeEEEEEEec
Q 003385 608 KIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHH--RNLVQFLG------YCQEEGRSVLVYEFM 679 (824)
Q Consensus 608 ~LG~G~fg~Vy~a~~~~g~~vAVK~l~~~~~~~~~~~~~Ei~il~~l~H--pnIv~l~~------~~~~~~~~~lV~E~~ 679 (824)
.|+.|..+.||+....+| .+++|+.... ...+..|.++++.+.. -.+.+++. +....+..+++|||+
T Consensus 39 ~l~gG~~n~~~~v~~~~~-~~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~i 113 (346)
T 2q83_A 39 VIQGNQMALVWKVHTDSG-AVCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDWI 113 (346)
T ss_dssp ECC----CEEEEEEETTE-EEEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEECC
T ss_pred eccccccCcEEEEEeCCC-CEEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEee
Confidence 455567889999987644 5899988642 2344456666665531 12334443 123456789999999
Q ss_pred CCCCHH-----------HH---hhcc---c--Ccc-----ccCCHHHH-------------------------------H
Q 003385 680 HNGTLK-----------EH---LYGT---L--THE-----QRINWIKR-------------------------------L 704 (824)
Q Consensus 680 ~~gsL~-----------~~---L~~~---~--~~~-----~~l~~~~~-------------------------------~ 704 (824)
+|..+. .. ++.. . ... ....|... .
T Consensus 114 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 193 (346)
T 2q83_A 114 EGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEID 193 (346)
T ss_dssp CCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred cCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHH
Confidence 986432 11 1111 0 000 00122110 1
Q ss_pred HHHHHHHHHHHHHHh----------CCCCCeEecCCCCCCEEEcCCCcEEEEecCCccc
Q 003385 705 EIAEDAAKGIEYLHT----------GCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKF 753 (824)
Q Consensus 705 ~i~~qia~gL~yLH~----------~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~ 753 (824)
.+..++..++.+|++ .....++|+|+++.|||++.++.+.|+||+.+..
T Consensus 194 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~ 252 (346)
T 2q83_A 194 GFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF 252 (346)
T ss_dssp HHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred HHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence 112234445666653 0124899999999999998888899999998753
No 418
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=97.72 E-value=2.4e-05 Score=87.24 Aligned_cols=168 Identities=12% Similarity=0.051 Sum_probs=94.9
Q ss_pred ccceeeecccccCCCCCCcccchhhhceeccCCCCCCcHHHHHHHHHhcCCCCcccCCCCCCCCCCCCeeEcC-CCCCCc
Q 003385 339 LPFVLSFKFGKTYDSSRGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCN-SDPQPS 417 (824)
Q Consensus 339 l~~l~~L~L~~n~~s~LPP~i~~le~l~~L~l~~n~~~~~~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~c~-~~~~~~ 417 (824)
+++|+.++|.+|.++.+|+..-....|+.+.+.++ +..+.-.++.....+...... .....++-. ..+ .+
T Consensus 179 c~~L~~l~l~~n~l~~I~~~aF~~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~-------~~l~~I~~~aF~~-~~ 249 (401)
T 4fdw_A 179 CYNLKKADLSKTKITKLPASTFVYAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIP-------ENVSTIGQEAFRE-SG 249 (401)
T ss_dssp CTTCCEEECTTSCCSEECTTTTTTCCCSEEECCTT-CCEECTTTTTTCTTCCCEECC-------TTCCEECTTTTTT-CC
T ss_pred cccCCeeecCCCcceEechhhEeecccCEEEeCCc-hheehhhHhhCCCCCCEEecC-------CCccCcccccccc-CC
Confidence 45677777788888888777555677777777643 222111112222122221110 001111110 111 46
Q ss_pred eeEEEecCCCCCccCChhhhcccccccccccccccC-----CCCC-CCCCCCCcceEeecccccCCCCCccccCCCccce
Q 003385 418 ITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLT-----GPIP-DFSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRE 491 (824)
Q Consensus 418 L~~L~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~-----~~~p-~~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~L~~ 491 (824)
|+.|.| .++++..-+..|.++++|+.|+|.+|.+. .+.+ .|.+|++|+.++|. |.++..-..+|.+|++|+.
T Consensus 250 L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~ 327 (401)
T 4fdw_A 250 ITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQ 327 (401)
T ss_dssp CSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCE
T ss_pred ccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccE
Confidence 777777 44566344557778888888888877765 2333 27788888888887 4466333457777788888
Q ss_pred eeeccccccccccccccccc--eeccccCC
Q 003385 492 LYVQNNMLSGTVPSSLLSKN--VVLNYAGN 519 (824)
Q Consensus 492 L~l~~N~l~g~ip~~l~~~~--~~l~~~~n 519 (824)
|.|..| ++ .|+...|... ..+.+.+|
T Consensus 328 l~lp~~-l~-~I~~~aF~~~~L~~l~l~~n 355 (401)
T 4fdw_A 328 LTIPAN-VT-QINFSAFNNTGIKEVKVEGT 355 (401)
T ss_dssp EEECTT-CC-EECTTSSSSSCCCEEEECCS
T ss_pred EEECcc-cc-EEcHHhCCCCCCCEEEEcCC
Confidence 888544 66 6766665543 33444555
No 419
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.62 E-value=0.00024 Score=75.14 Aligned_cols=73 Identities=21% Similarity=0.239 Sum_probs=54.7
Q ss_pred ccccccCcEEEEEEEEcCCcEEEEEEeccCCcccchhhhHHHHHHhhcCCC---ccceeeceeecCCeEEEEEEecCCCC
Q 003385 607 KKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHR---NLVQFLGYCQEEGRSVLVYEFMHNGT 683 (824)
Q Consensus 607 ~~LG~G~fg~Vy~a~~~~g~~vAVK~l~~~~~~~~~~~~~Ei~il~~l~Hp---nIv~l~~~~~~~~~~~lV~E~~~~gs 683 (824)
+.+|.|..+.||+.+..+|+.+++|+...........+..|.+.|+.+... -+.+++++. . .++||||++++.
T Consensus 21 ~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~--~--~~lv~e~l~~~~ 96 (288)
T 3f7w_A 21 AERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD--D--RTLAMEWVDERP 96 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE--T--TEEEEECCCCCC
T ss_pred EecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc--C--ceEEEEeecccC
Confidence 568999999999999999999999987655444456688999999988522 244555442 2 378999998764
No 420
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=97.60 E-value=8.6e-06 Score=80.59 Aligned_cols=113 Identities=12% Similarity=0.103 Sum_probs=88.2
Q ss_pred ccceeeeccccc-CCCC-----CCcccchhhhceeccCCCCCCcHHHHHHHHHhcCCCCcccCCCCCCCCCCCCeeEcCC
Q 003385 339 LPFVLSFKFGKT-YDSS-----RGPLLNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNS 412 (824)
Q Consensus 339 l~~l~~L~L~~n-~~s~-----LPP~i~~le~l~~L~l~~n~~~~~~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~c~~ 412 (824)
.+.|++|+|+.| .+.. +...+.....|+.|+|+.|.+.......+......
T Consensus 35 ~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~----------------------- 91 (185)
T 1io0_A 35 DPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKV----------------------- 91 (185)
T ss_dssp CTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHH-----------------------
T ss_pred CCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHh-----------------------
Confidence 457889999998 7765 44445566789999999999988777776655320
Q ss_pred CCCCceeEEEecCCCCCcc----CChhhhcccccccccc--cccccCCCC-----CCCCCCCCcceEeecccccC
Q 003385 413 DPQPSITVIHLSSKNLTGN----IPSDLTKLSSLVELWL--DGNSLTGPI-----PDFSGCPDLRIIHLEDNQLT 476 (824)
Q Consensus 413 ~~~~~L~~L~L~~n~l~g~----lp~~i~~L~~L~~L~L--~~N~l~~~~-----p~~~~l~~L~~L~L~~N~l~ 476 (824)
.++|++|+|++|+|+.. +...+...++|+.|+| ++|.|+..- ..+...++|+.|+|++|++.
T Consensus 92 --n~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 92 --NNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp --CSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred --CCCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 13689999999999853 5667888899999999 889998632 23566789999999999986
No 421
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=97.55 E-value=1.1e-05 Score=88.78 Aligned_cols=87 Identities=15% Similarity=0.161 Sum_probs=55.8
Q ss_pred CCCceeEEEecC--CCCCc-----cCChhh--hcccccccccccccccCCCCCC----CCCCCCcceEeecccccCCC--
Q 003385 414 PQPSITVIHLSS--KNLTG-----NIPSDL--TKLSSLVELWLDGNSLTGPIPD----FSGCPDLRIIHLEDNQLTGP-- 478 (824)
Q Consensus 414 ~~~~L~~L~L~~--n~l~g-----~lp~~i--~~L~~L~~L~L~~N~l~~~~p~----~~~l~~L~~L~L~~N~l~g~-- 478 (824)
.+|+|+.|+|+. |...| .+...+ ..+++|+.|+|.+|.+....+. ...+++|+.|+|+.|+|++.
T Consensus 217 ~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~ 296 (362)
T 2ra8_A 217 DLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGA 296 (362)
T ss_dssp BCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHH
T ss_pred cCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHH
Confidence 356788888753 22111 111122 2467888888888887653221 23477888888888888752
Q ss_pred --CCccccCCCccceeeecccccc
Q 003385 479 --LPSSLMNLPNLRELYVQNNMLS 500 (824)
Q Consensus 479 --lP~~l~~l~~L~~L~l~~N~l~ 500 (824)
++..+..+++|+.|+|++|.++
T Consensus 297 ~~L~~~L~~l~~L~~L~L~~n~i~ 320 (362)
T 2ra8_A 297 RLLLDHVDKIKHLKFINMKYNYLS 320 (362)
T ss_dssp HHHHTTHHHHTTCSEEECCSBBCC
T ss_pred HHHHhhcccCCcceEEECCCCcCC
Confidence 4555566788888888888777
No 422
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=97.41 E-value=0.0001 Score=82.21 Aligned_cols=156 Identities=11% Similarity=0.007 Sum_probs=103.2
Q ss_pred cceeeecccccCCCCCCcc-cchhhhceeccCCCCCCcHHHHHHHHHhcCCCCcccCCCCCCCCCCCCeeE-cCCCCCCc
Q 003385 340 PFVLSFKFGKTYDSSRGPL-LNAMEINKYLERNDGSIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQ-CNSDPQPS 417 (824)
Q Consensus 340 ~~l~~L~L~~n~~s~LPP~-i~~le~l~~L~l~~n~~~~~~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~-c~~~~~~~ 417 (824)
++|+.+.|. +.++.+++. +..+..|+.+.+..+-.. +...++.. ..+..... |.....++ .....+++
T Consensus 203 ~~L~~l~lp-~~l~~I~~~aF~~~~~L~~l~l~~~l~~-I~~~aF~~-~~L~~i~l-------p~~i~~I~~~aF~~c~~ 272 (401)
T 4fdw_A 203 AGIEEVLLP-VTLKEIGSQAFLKTSQLKTIEIPENVST-IGQEAFRE-SGITTVKL-------PNGVTNIASRAFYYCPE 272 (401)
T ss_dssp CCCSEEECC-TTCCEECTTTTTTCTTCCCEECCTTCCE-ECTTTTTT-CCCSEEEE-------ETTCCEECTTTTTTCTT
T ss_pred cccCEEEeC-CchheehhhHhhCCCCCCEEecCCCccC-cccccccc-CCccEEEe-------CCCccEEChhHhhCCCC
Confidence 456677776 447788777 778888888888764211 11011111 01111100 00011121 11234579
Q ss_pred eeEEEecCCCCC-----ccCChhhhcccccccccccccccCCCCCC-CCCCCCcceEeecccccCCCCCccccCCCccce
Q 003385 418 ITVIHLSSKNLT-----GNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRE 491 (824)
Q Consensus 418 L~~L~L~~n~l~-----g~lp~~i~~L~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~L~~ 491 (824)
|+.|+|.+|.+. ..-+..|.++++|+.++|. |+++.+... |.+|++|+.|+|.+| ++..-+.+|.++ +|+.
T Consensus 273 L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~ 349 (401)
T 4fdw_A 273 LAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKE 349 (401)
T ss_dssp CCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCE
T ss_pred CCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCE
Confidence 999999998775 3445689999999999999 557776665 999999999999666 663445789999 9999
Q ss_pred eeeccccccccccccccc
Q 003385 492 LYVQNNMLSGTVPSSLLS 509 (824)
Q Consensus 492 L~l~~N~l~g~ip~~l~~ 509 (824)
|++.+|.+. .++...+.
T Consensus 350 l~l~~n~~~-~l~~~~F~ 366 (401)
T 4fdw_A 350 VKVEGTTPP-QVFEKVWY 366 (401)
T ss_dssp EEECCSSCC-BCCCSSCC
T ss_pred EEEcCCCCc-cccccccc
Confidence 999999988 66665543
No 423
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.41 E-value=0.00054 Score=73.46 Aligned_cols=138 Identities=19% Similarity=0.243 Sum_probs=90.0
Q ss_pred ccccccCcEEEEEEEEcCCcEEEEEEeccCCcccchhhhHHHHHHhhcC---CCccceeeceeecCCeEEEEEEecCCCC
Q 003385 607 KKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIH---HRNLVQFLGYCQEEGRSVLVYEFMHNGT 683 (824)
Q Consensus 607 ~~LG~G~fg~Vy~a~~~~g~~vAVK~l~~~~~~~~~~~~~Ei~il~~l~---HpnIv~l~~~~~~~~~~~lV~E~~~~gs 683 (824)
+.|+.|....+|+... +++.+++|+.... ....+..|.+.|+.+. ...+.+++.+....+..++||||+++..
T Consensus 42 ~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~~ 117 (312)
T 3jr1_A 42 EKLYSGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKSK 117 (312)
T ss_dssp EEECCSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCCC
T ss_pred EEeCCccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCCC
Confidence 4578899999999875 4778899987532 2456888999998884 3568888888887788999999999875
Q ss_pred HH--------HHh---hcccC-c-----------------cccCCHHHHH---HHH----------------HHHHHHH-
Q 003385 684 LK--------EHL---YGTLT-H-----------------EQRINWIKRL---EIA----------------EDAAKGI- 714 (824)
Q Consensus 684 L~--------~~L---~~~~~-~-----------------~~~l~~~~~~---~i~----------------~qia~gL- 714 (824)
+. ..| +.... . ...-+|.... ++. .+++..+
T Consensus 118 ~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~l~ 197 (312)
T 3jr1_A 118 NKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIVA 197 (312)
T ss_dssp CCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHHHH
T ss_pred CCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHH
Confidence 31 111 21111 0 0011343221 011 1122222
Q ss_pred HHHHh-CCCCCeEecCCCCCCEEEcCCCcEEEEecC
Q 003385 715 EYLHT-GCVPAIIHRDLKSSNILLDKHMRAKVSDFG 749 (824)
Q Consensus 715 ~yLH~-~~~~gIvHrDLkp~NILl~~~~~vkL~DFG 749 (824)
..|.. ...+.++|+|+.+.|++++.++ +.|+|+.
T Consensus 198 ~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 198 DTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 23421 1236899999999999999887 8999985
No 424
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.38 E-value=0.00018 Score=80.50 Aligned_cols=78 Identities=15% Similarity=0.202 Sum_probs=47.9
Q ss_pred CCeEecCCCCCCEEEcCCCcEEEEecCCcccccCCCCceeccc-cCCCCCcchhccccCC---CCchHHHHHHHHHHHHH
Q 003385 723 PAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHVSSIV-RGTVGYLDPEYYISQQ---LTDKSDVYSFGVILLEL 798 (824)
Q Consensus 723 ~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~-~gt~~y~aPE~l~~~~---~~~~~DIwSlGvil~el 798 (824)
+.++|||+++.|||++.++ ++++||+.+....+... ..... .-...|.+|+...... .....++.+....+|+.
T Consensus 232 ~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~D-la~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (420)
T 2pyw_A 232 QALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFD-IGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWNL 309 (420)
T ss_dssp CEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHH-HHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHHH
T ss_pred CeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHH-HHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHHH
Confidence 4899999999999998876 99999998865432111 11100 0113456666543211 11234556777788877
Q ss_pred HcCC
Q 003385 799 ISGQ 802 (824)
Q Consensus 799 ltG~ 802 (824)
+.++
T Consensus 310 y~~~ 313 (420)
T 2pyw_A 310 FNKR 313 (420)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7664
No 425
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.06 E-value=0.0014 Score=70.10 Aligned_cols=144 Identities=15% Similarity=0.195 Sum_probs=80.4
Q ss_pred ccccccCcEEEEEEEEcCCcEEEEEEeccCCcccchhhhHHHHHHhhcCCCc--cceeece------eecCCeEEEEEEe
Q 003385 607 KKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRN--LVQFLGY------CQEEGRSVLVYEF 678 (824)
Q Consensus 607 ~~LG~G~fg~Vy~a~~~~g~~vAVK~l~~~~~~~~~~~~~Ei~il~~l~Hpn--Iv~l~~~------~~~~~~~~lV~E~ 678 (824)
+.|+.|....+|+....+| .+++|+.... .....+..|.++++.+...+ +.+++.. ....+..+++++|
T Consensus 28 ~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~--~~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l~~~ 104 (322)
T 2ppq_A 28 KGIAEGVENSNFLLHTTKD-PLILTLYEKR--VEKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALISF 104 (322)
T ss_dssp EEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEEEC
T ss_pred eccCCCcccceEEEEeCCc-cEEEEEeCCC--CCHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEEEEe
Confidence 3566788889999887655 6889988642 23456677888888774222 3333322 1223567899999
Q ss_pred cCCCCHHH-----------H---hhcc---cCcc--c--c-CCHHHHHH------------HHHHHHHHHHHHHhC----
Q 003385 679 MHNGTLKE-----------H---LYGT---LTHE--Q--R-INWIKRLE------------IAEDAAKGIEYLHTG---- 720 (824)
Q Consensus 679 ~~~gsL~~-----------~---L~~~---~~~~--~--~-l~~~~~~~------------i~~qia~gL~yLH~~---- 720 (824)
++|..+.. . ++.. .... . . ..|..... +...+...++.+++.
T Consensus 105 l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~~~~~ 184 (322)
T 2ppq_A 105 LEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHWPKD 184 (322)
T ss_dssp CCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHCCCS
T ss_pred CCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCccc
Confidence 98864311 1 1111 0000 0 0 01211100 011234445555531
Q ss_pred CCCCeEecCCCCCCEEEcCCCcEEEEecCCccc
Q 003385 721 CVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKF 753 (824)
Q Consensus 721 ~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~ 753 (824)
...+++|+|+++.|||++++..+.|+||+.+..
T Consensus 185 ~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 185 LPAGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp SCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred CCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 124799999999999998876668999997754
No 426
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.02 E-value=8e-05 Score=72.70 Aligned_cols=85 Identities=12% Similarity=0.092 Sum_probs=66.3
Q ss_pred CceeEEEecCCCCCccCChhhhcccccccccccccc-cCCC-CCCCCCC----CCcceEeecccc-cCCCCCccccCCCc
Q 003385 416 PSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNS-LTGP-IPDFSGC----PDLRIIHLEDNQ-LTGPLPSSLMNLPN 488 (824)
Q Consensus 416 ~~L~~L~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~-l~~~-~p~~~~l----~~L~~L~L~~N~-l~g~lP~~l~~l~~ 488 (824)
.+|+.|||+++.++..=-..+.++++|+.|+|++|. |+.. +..++.+ ++|+.|+|+++. |+..=-..+.++++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 479999999999985544568899999999999995 6652 2235554 479999999985 77433346788999
Q ss_pred cceeeecccc-cc
Q 003385 489 LRELYVQNNM-LS 500 (824)
Q Consensus 489 L~~L~l~~N~-l~ 500 (824)
|+.|+|+++. ++
T Consensus 141 L~~L~L~~c~~It 153 (176)
T 3e4g_A 141 LKYLFLSDLPGVK 153 (176)
T ss_dssp CCEEEEESCTTCC
T ss_pred CCEEECCCCCCCC
Confidence 9999999986 44
No 427
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.00 E-value=0.0033 Score=67.61 Aligned_cols=142 Identities=13% Similarity=0.107 Sum_probs=74.2
Q ss_pred cccccCcEE-EEEEEEcCCcEEEEEEeccCCcccchhhhHHHHHHhhcCCC--ccceeeceeecCCeEEEEEEecCCCCH
Q 003385 608 KIGSGGFGV-VYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHR--NLVQFLGYCQEEGRSVLVYEFMHNGTL 684 (824)
Q Consensus 608 ~LG~G~fg~-Vy~a~~~~g~~vAVK~l~~~~~~~~~~~~~Ei~il~~l~Hp--nIv~l~~~~~~~~~~~lV~E~~~~gsL 684 (824)
.|+.|.... +|+....+++.+++|...... ...+..|+.+++.+... .+.+++.+..+.+ +++||++.+..+
T Consensus 25 ~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~---~~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~~~l 99 (333)
T 3csv_A 25 PLAGDASSRRYQRLRSPTGAKAVLMDWSPEE---GGDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGDALF 99 (333)
T ss_dssp C--------CCEEEECTTCCEEEEEECCTTT---TCCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCSCBH
T ss_pred ECCCCCCCceEEEEEcCCCCeEEEEECCCCC---CccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCCcch
Confidence 455555444 666654446777777654321 14567788888877432 3456666544333 689999977666
Q ss_pred HHHhhccc---------------------Cc-cccCCHHHHH--------------------HHHHHHHHHHHHHH---h
Q 003385 685 KEHLYGTL---------------------TH-EQRINWIKRL--------------------EIAEDAAKGIEYLH---T 719 (824)
Q Consensus 685 ~~~L~~~~---------------------~~-~~~l~~~~~~--------------------~i~~qia~gL~yLH---~ 719 (824)
.+.+.... .. ...+...... .....+...++.+. .
T Consensus 100 ~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~~ 179 (333)
T 3csv_A 100 TEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQL 179 (333)
T ss_dssp HHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhcc
Confidence 54332110 00 0011111000 00011112222221 1
Q ss_pred CCCCCeEecCCCCCCEEEcCC----CcEEEEecCCcccc
Q 003385 720 GCVPAIIHRDLKSSNILLDKH----MRAKVSDFGLSKFA 754 (824)
Q Consensus 720 ~~~~gIvHrDLkp~NILl~~~----~~vkL~DFGla~~~ 754 (824)
.....++|||+.+.|||++.+ +.+.|+||+.+...
T Consensus 180 ~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G 218 (333)
T 3csv_A 180 EGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG 218 (333)
T ss_dssp CSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred cCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence 112489999999999999875 67999999988654
No 428
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=96.96 E-value=0.0024 Score=67.75 Aligned_cols=70 Identities=11% Similarity=0.126 Sum_probs=44.6
Q ss_pred ccccccCcEEEEEEEEcCCcEEEEEEeccCCcccchhhhHHHHHHhhcCCCcc-ceeeceeecCCeEEEEEEec-CCCCH
Q 003385 607 KKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNL-VQFLGYCQEEGRSVLVYEFM-HNGTL 684 (824)
Q Consensus 607 ~~LG~G~fg~Vy~a~~~~g~~vAVK~l~~~~~~~~~~~~~Ei~il~~l~HpnI-v~l~~~~~~~~~~~lV~E~~-~~gsL 684 (824)
+.|+.|....+|+. +.+++|+...... ......+|..+++.+...++ .++++...+ .-++++||+ ++.++
T Consensus 24 ~~l~gG~tN~~~~~-----~~~vlR~~~~~~~-~~~~r~~E~~~l~~l~~~g~~P~~~~~~~~--~~~~v~e~i~~g~~l 95 (301)
T 3dxq_A 24 LERLGGLTNLVFRA-----GDLCLRIPGKGTE-EYINRANEAVAAREAAKAGVSPEVLHVDPA--TGVMVTRYIAGAQTM 95 (301)
T ss_dssp EEEESCSSEEEEEE-----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEECTT--TCCEEEECCTTCEEC
T ss_pred eEcCCcccccccee-----eeEEEECCCCCcc-ceeCHHHHHHHHHHHHHcCCCCceEEEECC--CCEEEEeecCCCccC
Confidence 56888999999998 5688998764321 12234578888887753333 456554432 346899999 55443
No 429
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.73 E-value=0.0024 Score=71.56 Aligned_cols=71 Identities=13% Similarity=0.302 Sum_probs=48.7
Q ss_pred ccccccCcEEEEEEEEcC--------CcEEEEEEeccCCcccchhhhHHHHHHhhcCCCcc-ceeeceeecCCeEEEEEE
Q 003385 607 KKIGSGGFGVVYYGKLKD--------GKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNL-VQFLGYCQEEGRSVLVYE 677 (824)
Q Consensus 607 ~~LG~G~fg~Vy~a~~~~--------g~~vAVK~l~~~~~~~~~~~~~Ei~il~~l~HpnI-v~l~~~~~~~~~~~lV~E 677 (824)
+.|+.|-...+|+....+ ++.+++|+.... .....+.+|..+++.+...++ .++++.+.+ .+|+|
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~e 152 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLEE 152 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEEC
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--CcHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEEE
Confidence 457788889999998753 578999988432 111455679999988853333 566766543 38999
Q ss_pred ecCCCC
Q 003385 678 FMHNGT 683 (824)
Q Consensus 678 ~~~~gs 683 (824)
|++|.+
T Consensus 153 ~l~G~~ 158 (429)
T 1nw1_A 153 YIPSRP 158 (429)
T ss_dssp CCCEEE
T ss_pred EeCCcc
Confidence 998643
No 430
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.64 E-value=0.0017 Score=60.02 Aligned_cols=37 Identities=32% Similarity=0.328 Sum_probs=20.3
Q ss_pred CcceEeecccccCCCCCccccCCCccceeeecccccc
Q 003385 464 DLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQNNMLS 500 (824)
Q Consensus 464 ~L~~L~L~~N~l~g~lP~~l~~l~~L~~L~l~~N~l~ 500 (824)
+|+.|+|++|+|+..-++.|..+++|+.|+|++|.+.
T Consensus 32 ~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 32 DTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 3556666666666333334555666666655555543
No 431
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.59 E-value=0.0016 Score=60.30 Aligned_cols=56 Identities=32% Similarity=0.520 Sum_probs=47.5
Q ss_pred eEEEecCCCCC-ccCChhhhcccccccccccccccCCCCCC-CCCCCCcceEeecccccC
Q 003385 419 TVIHLSSKNLT-GNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLT 476 (824)
Q Consensus 419 ~~L~L~~n~l~-g~lp~~i~~L~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~ 476 (824)
..++.++++|+ ..+|..|. ++|+.|+|++|+|+.+++. |..+++|+.|+|++|.+.
T Consensus 11 ~~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TEEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CEEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 37888999987 46776543 4799999999999999887 788999999999999876
No 432
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.57 E-value=0.01 Score=63.46 Aligned_cols=142 Identities=13% Similarity=0.138 Sum_probs=80.9
Q ss_pred cccccCcEEEEEEEEcCCcEEEEEEeccCCcccchhhhHHHHHHhhcCCCc--cceeece-----eecCCeEEEEEEecC
Q 003385 608 KIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRN--LVQFLGY-----CQEEGRSVLVYEFMH 680 (824)
Q Consensus 608 ~LG~G~fg~Vy~a~~~~g~~vAVK~l~~~~~~~~~~~~~Ei~il~~l~Hpn--Iv~l~~~-----~~~~~~~~lV~E~~~ 680 (824)
.++ |....||+....+|+.+++|+.+... .....+..|..+++.+.... +.+++.. ....+..+++|++++
T Consensus 33 ~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i~ 110 (328)
T 1zyl_A 33 PLN-SYENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVG 110 (328)
T ss_dssp EEC-CSSSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCC
T ss_pred eec-CcccceEEEEcCCCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEecC
Confidence 355 77789998877777789999986432 23456777888888774222 3444443 122456688999998
Q ss_pred CCCHH-----------HH---hhcc---cC--ccccCCHHHH----------------------HHHHHHHHHHHHHHHh
Q 003385 681 NGTLK-----------EH---LYGT---LT--HEQRINWIKR----------------------LEIAEDAAKGIEYLHT 719 (824)
Q Consensus 681 ~gsL~-----------~~---L~~~---~~--~~~~l~~~~~----------------------~~i~~qia~gL~yLH~ 719 (824)
|..+. .. ++.. .. .....++... ...+.+++..+.-+..
T Consensus 111 G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 190 (328)
T 1zyl_A 111 GRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWR 190 (328)
T ss_dssp CEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHHhh
Confidence 75321 11 1110 00 0111121110 1111222222222211
Q ss_pred -CCCCCeEecCCCCCCEEEcCCCcEEEEecCCccc
Q 003385 720 -GCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKF 753 (824)
Q Consensus 720 -~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~ 753 (824)
.....++|+|+++.|||++ + .+.|+||+.+..
T Consensus 191 ~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 191 EDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp SCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred hcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 1123689999999999999 4 899999987754
No 433
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.53 E-value=0.0049 Score=67.84 Aligned_cols=142 Identities=15% Similarity=0.230 Sum_probs=80.7
Q ss_pred ccccccCcEEEEEEEEc--------CCcEEEEEEeccCCcccchhhhHHHHHHhhcC-CCccceeeceeecCCeEEEEEE
Q 003385 607 KKIGSGGFGVVYYGKLK--------DGKEIAVKVLTSNSYQGKREFTNEVTLLSRIH-HRNLVQFLGYCQEEGRSVLVYE 677 (824)
Q Consensus 607 ~~LG~G~fg~Vy~a~~~--------~g~~vAVK~l~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~~~lV~E 677 (824)
+.|..|-...+|+.... +++.+++|+.... ......+.+|.++++.+. +.-..++++.+.+ .+|||
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e 130 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQ 130 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEE
Confidence 35666777889998764 2478999986332 223455668999998885 3333566666643 28999
Q ss_pred ecCCCCHHH--------------Hh---hcc-cCccccCC--HHHHHHHHHHHH-------------------HHHHHHH
Q 003385 678 FMHNGTLKE--------------HL---YGT-LTHEQRIN--WIKRLEIAEDAA-------------------KGIEYLH 718 (824)
Q Consensus 678 ~~~~gsL~~--------------~L---~~~-~~~~~~l~--~~~~~~i~~qia-------------------~gL~yLH 718 (824)
|++|..|.. .| +.. ........ +.++..+..++. ..+..|.
T Consensus 131 ~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~ 210 (379)
T 3feg_A 131 YIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLR 210 (379)
T ss_dssp CCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHH
T ss_pred EecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHH
Confidence 998754421 01 111 01111112 233333333321 1223332
Q ss_pred ----hC-CCCCeEecCCCCCCEEEcCC----CcEEEEecCCccc
Q 003385 719 ----TG-CVPAIIHRDLKSSNILLDKH----MRAKVSDFGLSKF 753 (824)
Q Consensus 719 ----~~-~~~gIvHrDLkp~NILl~~~----~~vkL~DFGla~~ 753 (824)
.. ....++|+|+.+.|||++.+ +.+.++||..+..
T Consensus 211 ~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 211 KLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 21 12378999999999999876 7899999998754
No 434
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.32 E-value=0.017 Score=65.13 Aligned_cols=72 Identities=11% Similarity=0.109 Sum_probs=47.3
Q ss_pred ccccccCcEEEEEEEEcC-CcEEEEEEeccCCcccchhhhHHHHHHhhcCCCcc-ceeeceeecCCeEEEEEEecCCCC
Q 003385 607 KKIGSGGFGVVYYGKLKD-GKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRNL-VQFLGYCQEEGRSVLVYEFMHNGT 683 (824)
Q Consensus 607 ~~LG~G~fg~Vy~a~~~~-g~~vAVK~l~~~~~~~~~~~~~Ei~il~~l~HpnI-v~l~~~~~~~~~~~lV~E~~~~gs 683 (824)
+.|+.|-...+|+....+ ++.+++|+..... ...-...+|..+++.+...++ .++++.+. + .+|+||++|.+
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~-~~~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~ 187 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKT-DEIINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYA 187 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-C-CSCSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEE
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCCh-hhhcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCcc
Confidence 467788889999998775 4788999875322 111122589999999875544 56776663 2 25999998744
No 435
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.31 E-value=0.0066 Score=66.32 Aligned_cols=72 Identities=15% Similarity=0.179 Sum_probs=44.1
Q ss_pred ccccccCcEEEEEEEEcC---------CcEEEEEEeccCCcccchhhhHHHHHHhhcCCCc-cceeeceeecCCeEEEEE
Q 003385 607 KKIGSGGFGVVYYGKLKD---------GKEIAVKVLTSNSYQGKREFTNEVTLLSRIHHRN-LVQFLGYCQEEGRSVLVY 676 (824)
Q Consensus 607 ~~LG~G~fg~Vy~a~~~~---------g~~vAVK~l~~~~~~~~~~~~~Ei~il~~l~Hpn-Iv~l~~~~~~~~~~~lV~ 676 (824)
+.|+.|....+|+....+ ++.+++|+..... ........|.++++.+...+ +.++++.. .+ ++||
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~-~~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~~--~~v~ 113 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHV-DELYNTISEFEVYKTMSKYKIAPQLLNTF--NG--GRIE 113 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTG-GGTSCHHHHHHHHHHHHHTTSSCCEEEEE--TT--EEEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCc-cceecHHHHHHHHHHHHhcCCCCceEEec--CC--cEEE
Confidence 457778888999998754 2688899875432 11123467888888885333 34666544 22 6899
Q ss_pred EecCCCC
Q 003385 677 EFMHNGT 683 (824)
Q Consensus 677 E~~~~gs 683 (824)
||++|..
T Consensus 114 e~i~G~~ 120 (369)
T 3c5i_A 114 EWLYGDP 120 (369)
T ss_dssp ECCCSEE
T ss_pred EEecCCc
Confidence 9998754
No 436
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.14 E-value=0.021 Score=61.64 Aligned_cols=68 Identities=12% Similarity=0.193 Sum_probs=44.7
Q ss_pred cccCcEEEEEEEEcCCcEEEEEEeccCCcccchhhhHHHHHHhhcCC---Cccceeece------eecCCeEEEEEEecC
Q 003385 610 GSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFTNEVTLLSRIHH---RNLVQFLGY------CQEEGRSVLVYEFMH 680 (824)
Q Consensus 610 G~G~fg~Vy~a~~~~g~~vAVK~l~~~~~~~~~~~~~Ei~il~~l~H---pnIv~l~~~------~~~~~~~~lV~E~~~ 680 (824)
|.|....||+....+| .+++|+..... ...|+.+++.+.. |.+.+.+.. ....+..+++|+|++
T Consensus 32 G~g~~N~vy~v~~~~g-~~vLK~~~~~~------~~~E~~~l~~L~~~g~~~vp~pi~~~~G~~~~~~~g~~~~l~~~i~ 104 (339)
T 3i1a_A 32 GADTNAFAYQADSESK-SYFIKLKYGYH------DEINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKHFKIIAYPFIH 104 (339)
T ss_dssp TSCSSCEEEEEECSSC-EEEEEEEECSS------CCHHHHHHHHHHHTTCCSSCCCCCCTTSCSSEECSSEEEEEEECCC
T ss_pred cCccccceEEEEeCCC-CEEEEEecCcc------chHHHHHHHHHHhcCCcccccceecCCCCEEEEECCEEEEEEeccC
Confidence 3344679999987766 89999876433 2467777766632 224555533 233567899999999
Q ss_pred CCCH
Q 003385 681 NGTL 684 (824)
Q Consensus 681 ~gsL 684 (824)
|..+
T Consensus 105 G~~~ 108 (339)
T 3i1a_A 105 APNG 108 (339)
T ss_dssp CCBT
T ss_pred CCcC
Confidence 8654
No 437
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=95.61 E-value=0.0036 Score=62.11 Aligned_cols=112 Identities=13% Similarity=0.077 Sum_probs=61.6
Q ss_pred hhceeccCCCC-CCcHHHHHHHHHhcCCCCcccCCCCCCCCCCCCeeEcCCCCCCceeEEEecCCCCCc----cCChhhh
Q 003385 363 EINKYLERNDG-SIDGVAIVSVISLYSSADWAQEGGDPCLPVPWSWLQCNSDPQPSITVIHLSSKNLTG----NIPSDLT 437 (824)
Q Consensus 363 e~l~~L~l~~n-~~~~~~l~~lk~~~~~~~w~~~~~dpc~~~~~~~~~c~~~~~~~L~~L~L~~n~l~g----~lp~~i~ 437 (824)
..|+.|+|++| .+.......|...... -+.|+.|+|++|+|.. .+.+.+.
T Consensus 41 ~~L~~L~L~~nn~igd~ga~~la~aL~~-------------------------N~~L~~L~L~~n~igd~ga~alA~aL~ 95 (197)
T 1pgv_A 41 TDLKEVNINNMKRVSKERIRSLIEAACN-------------------------SKHIEKFSLANTAISDSEARGLIELIE 95 (197)
T ss_dssp SSCCEEECTTCCSSCHHHHHHHHHHHTT-------------------------CSCCCEEECTTSCCBHHHHTTHHHHHH
T ss_pred CCccEEECCCCCCCCHHHHHHHHHHHhh-------------------------CCCcCEEEccCCCCChHHHHHHHHHHh
Confidence 34666777764 6666555555554321 1257778888887762 2334444
Q ss_pred cccccccccccccccCCC-----CCCCCCCCCcceEeeccccc---CC----CCCccccCCCccceeeeccccc
Q 003385 438 KLSSLVELWLDGNSLTGP-----IPDFSGCPDLRIIHLEDNQL---TG----PLPSSLMNLPNLRELYVQNNML 499 (824)
Q Consensus 438 ~L~~L~~L~L~~N~l~~~-----~p~~~~l~~L~~L~L~~N~l---~g----~lP~~l~~l~~L~~L~l~~N~l 499 (824)
.=+.|+.|+|+.|+|+.. ...+..-+.|+.|+|++|.. .. .+-+.+..-+.|+.|+++.|..
T Consensus 96 ~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 96 TSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASM 169 (197)
T ss_dssp HCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCH
T ss_pred cCCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCc
Confidence 556777777777777642 11244445577777765432 21 1223344445566666655543
No 438
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.36 E-value=0.046 Score=60.36 Aligned_cols=142 Identities=14% Similarity=0.206 Sum_probs=79.7
Q ss_pred cccccCcEEEEEEEEcC--------CcEEEEEEeccCCcc-----------cc-------hhhhHHHHHHhhcC-CCccc
Q 003385 608 KIGSGGFGVVYYGKLKD--------GKEIAVKVLTSNSYQ-----------GK-------REFTNEVTLLSRIH-HRNLV 660 (824)
Q Consensus 608 ~LG~G~fg~Vy~a~~~~--------g~~vAVK~l~~~~~~-----------~~-------~~~~~Ei~il~~l~-HpnIv 660 (824)
.|..|-...+|+....+ .+.|.+++.-..... ++ +.+..|.++++.+. +.-..
T Consensus 59 ~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~P 138 (401)
T 3f2s_A 59 VIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLGP 138 (401)
T ss_dssp EEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSSC
T ss_pred EcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCCC
Confidence 45457778999988753 367889987543211 11 11234888888885 44456
Q ss_pred eeeceeecCCeEEEEEEecCCCCHHHH-----------------hhcc-cCccccCC--HHHHHHHHHHHH---------
Q 003385 661 QFLGYCQEEGRSVLVYEFMHNGTLKEH-----------------LYGT-LTHEQRIN--WIKRLEIAEDAA--------- 711 (824)
Q Consensus 661 ~l~~~~~~~~~~~lV~E~~~~gsL~~~-----------------L~~~-~~~~~~l~--~~~~~~i~~qia--------- 711 (824)
++++++.++ +|+||+++.+|... ++.. ........ +.....+..++.
T Consensus 139 kl~~~~~~G----~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~~ 214 (401)
T 3f2s_A 139 KLYGIFPQG----RLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEESR 214 (401)
T ss_dssp CEEEEETTE----EEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHHH
T ss_pred eEEEEeCCC----eEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchhh
Confidence 777776432 89999986543210 0111 11111122 112222222211
Q ss_pred -------------HHH----HHHHhC-CCCCeEecCCCCCCEEEcCC------CcEEEEecCCccc
Q 003385 712 -------------KGI----EYLHTG-CVPAIIHRDLKSSNILLDKH------MRAKVSDFGLSKF 753 (824)
Q Consensus 712 -------------~gL----~yLH~~-~~~gIvHrDLkp~NILl~~~------~~vkL~DFGla~~ 753 (824)
.-+ ++|... ....++|+|+.+.|||++.+ +.+.++||..+..
T Consensus 215 ~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~ 280 (401)
T 3f2s_A 215 IKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEE
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCCc
Confidence 112 223221 12368999999999999887 7899999997753
No 439
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=94.61 E-value=0.069 Score=59.51 Aligned_cols=72 Identities=11% Similarity=0.086 Sum_probs=47.5
Q ss_pred ccccccCcEEEEEEEEcC--------CcEEEEEEeccCCcccchhhhHHHHHHhhcC-CCccceeeceeecCCeEEEEEE
Q 003385 607 KKIGSGGFGVVYYGKLKD--------GKEIAVKVLTSNSYQGKREFTNEVTLLSRIH-HRNLVQFLGYCQEEGRSVLVYE 677 (824)
Q Consensus 607 ~~LG~G~fg~Vy~a~~~~--------g~~vAVK~l~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~~~lV~E 677 (824)
+.+..|-...+|+....+ ++.+++|+..... ...-+..+|.++++.+. +.-..++++.+. + ++|+|
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t-~~~idR~~E~~~l~~L~~~gi~P~l~~~~~--~--~~I~e 150 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV-GKFYDSKVELDVFRYLSNINIAPNIIADFP--E--GRIEE 150 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC--CCCCHHHHHHHHHHHHHTTSSCCEEEEET--T--EEEEE
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc-chhcCHHHHHHHHHHHHhcCCCCCEEEEcC--C--CEEEE
Confidence 456667788999998763 5789999865322 22223467888888885 333455665432 2 68999
Q ss_pred ecCCCC
Q 003385 678 FMHNGT 683 (824)
Q Consensus 678 ~~~~gs 683 (824)
|++|..
T Consensus 151 fI~G~~ 156 (424)
T 3mes_A 151 FIDGEP 156 (424)
T ss_dssp CCCSEE
T ss_pred EeCCcc
Confidence 999865
No 440
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=94.35 E-value=0.054 Score=59.52 Aligned_cols=80 Identities=19% Similarity=0.152 Sum_probs=60.1
Q ss_pred CCceeEEEecCCCCCccCChhhhcccccccccccccccCCCCCC-CCCCCCcceEeecccccCCCCCccccCCCccceee
Q 003385 415 QPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELY 493 (824)
Q Consensus 415 ~~~L~~L~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~L~~L~ 493 (824)
..+|+.+.+.++ ++..-...|.++++|+.++|..+ ++.+... |.+|++|+.++|..| ++..-..+|.++++|+.++
T Consensus 296 ~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ 372 (394)
T 4fs7_A 296 CSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVE 372 (394)
T ss_dssp CTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEE
T ss_pred cccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEE
Confidence 457888888765 66334557889999999999754 6665553 899999999999877 6623345899999999998
Q ss_pred eccc
Q 003385 494 VQNN 497 (824)
Q Consensus 494 l~~N 497 (824)
+..|
T Consensus 373 lp~~ 376 (394)
T 4fs7_A 373 LPKR 376 (394)
T ss_dssp EEGG
T ss_pred ECCC
Confidence 8654
No 441
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=94.26 E-value=0.073 Score=58.00 Aligned_cols=89 Identities=15% Similarity=0.242 Sum_probs=62.9
Q ss_pred CceeEEEecCCCCCccCChhhhcccccccccccccccCCCCCC-CCCCCCcceEeecccccCCCCC-ccccCCCccceee
Q 003385 416 PSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLP-SSLMNLPNLRELY 493 (824)
Q Consensus 416 ~~L~~L~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~g~lP-~~l~~l~~L~~L~ 493 (824)
.+|+.+.+.++ ++..-...|.++++|+.+.|.+|.++.+.+. |.+|.+|+.++|.++ ++ .|. .+|.++++|+.+.
T Consensus 263 ~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~aF~~C~~L~~i~ 339 (379)
T 4h09_A 263 TALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LK-TIQVYAFKNCKALSTIS 339 (379)
T ss_dssp TTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCTTCCCCC
T ss_pred ehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-cc-EEHHHHhhCCCCCCEEE
Confidence 46777777644 5523344778888888888888888876664 888888888888755 55 444 5788888888888
Q ss_pred eccccccccccccccc
Q 003385 494 VQNNMLSGTVPSSLLS 509 (824)
Q Consensus 494 l~~N~l~g~ip~~l~~ 509 (824)
+..+ ++ .|....|.
T Consensus 340 ip~~-v~-~I~~~aF~ 353 (379)
T 4h09_A 340 YPKS-IT-LIESGAFE 353 (379)
T ss_dssp CCTT-CC-EECTTTTT
T ss_pred ECCc-cC-EEchhHhh
Confidence 7544 55 56555544
No 442
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=93.86 E-value=0.0076 Score=59.77 Aligned_cols=83 Identities=14% Similarity=0.245 Sum_probs=62.1
Q ss_pred CceeEEEecCC-CCCc----cCChhhhcccccccccccccccCCCCC-----CCCCCCCcceEeecccccCCC----CCc
Q 003385 416 PSITVIHLSSK-NLTG----NIPSDLTKLSSLVELWLDGNSLTGPIP-----DFSGCPDLRIIHLEDNQLTGP----LPS 481 (824)
Q Consensus 416 ~~L~~L~L~~n-~l~g----~lp~~i~~L~~L~~L~L~~N~l~~~~p-----~~~~l~~L~~L~L~~N~l~g~----lP~ 481 (824)
+.|++|+|++| +|.. .+-+.+..=+.|+.|+|++|+|...-- .+..-+.|+.|+|++|+|... +-+
T Consensus 41 ~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~ 120 (197)
T 1pgv_A 41 TDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLR 120 (197)
T ss_dssp SSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHH
T ss_pred CCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHH
Confidence 47899999986 7762 245567777899999999999985321 244567899999999999832 334
Q ss_pred cccCCCccceeeecccc
Q 003385 482 SLMNLPNLRELYVQNNM 498 (824)
Q Consensus 482 ~l~~l~~L~~L~l~~N~ 498 (824)
.+..-+.|++|+|++|.
T Consensus 121 aL~~N~tL~~L~L~n~~ 137 (197)
T 1pgv_A 121 STLVTQSIVEFKADNQR 137 (197)
T ss_dssp HTTTTCCCSEEECCCCS
T ss_pred HHhhCCceeEEECCCCc
Confidence 56666779999998763
No 443
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=93.16 E-value=0.091 Score=57.69 Aligned_cols=81 Identities=23% Similarity=0.346 Sum_probs=57.3
Q ss_pred CceeEEEecCCCCCccCChhhhcccccccccccccccCCCCCC-CCCCCCcceEeecccccCCCCC-ccccCCCccceee
Q 003385 416 PSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLP-SSLMNLPNLRELY 493 (824)
Q Consensus 416 ~~L~~L~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~g~lP-~~l~~l~~L~~L~ 493 (824)
.+|+.+.+. +.++..-...|.++++|+.++|..| ++.+... |.+|++|+.+.|..+ ++ .+. .+|.++++|+.++
T Consensus 288 ~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~-~I~~~aF~~C~~L~~i~ 363 (394)
T 4gt6_A 288 PALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VT-KIPESAFSNCTALNNIE 363 (394)
T ss_dssp TTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CC-BCCGGGGTTCTTCCEEE
T ss_pred cccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cC-EEhHhHhhCCCCCCEEE
Confidence 467777775 4566333457888888888888754 5554443 888888888888655 66 454 5788888888888
Q ss_pred ecccccc
Q 003385 494 VQNNMLS 500 (824)
Q Consensus 494 l~~N~l~ 500 (824)
+.+|...
T Consensus 364 ~~~~~~~ 370 (394)
T 4gt6_A 364 YSGSRSQ 370 (394)
T ss_dssp ESSCHHH
T ss_pred ECCceee
Confidence 8877543
No 444
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=93.00 E-value=0.018 Score=55.93 Aligned_cols=70 Identities=10% Similarity=0.119 Sum_probs=51.4
Q ss_pred cCChhhhcccccccccccccccCCC-CCCCCCCCCcceEeecccc-cCCCCCccccCC----Cccceeeecccc-cc
Q 003385 431 NIPSDLTKLSSLVELWLDGNSLTGP-IPDFSGCPDLRIIHLEDNQ-LTGPLPSSLMNL----PNLRELYVQNNM-LS 500 (824)
Q Consensus 431 ~lp~~i~~L~~L~~L~L~~N~l~~~-~p~~~~l~~L~~L~L~~N~-l~g~lP~~l~~l----~~L~~L~l~~N~-l~ 500 (824)
.+|.....--+|+.|||+++.|+.. +..+.+|++|+.|+|+++. |+..--..++.+ ++|++|+|++|. ++
T Consensus 52 ~LP~~~~~~~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~IT 128 (176)
T 3e4g_A 52 HLPTGPLDKYKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVT 128 (176)
T ss_dssp GSCCCSTTCCCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCC
T ss_pred cCCcccCCCceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCC
Confidence 3454332234799999999998763 3457899999999999995 774433456665 479999999985 76
No 445
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=91.60 E-value=0.22 Score=54.56 Aligned_cols=99 Identities=15% Similarity=0.338 Sum_probs=55.2
Q ss_pred CceeEEEecCCCCCccCChhhhcccccccccccccccCCCCCC-CCCCCCcceEeecccccCCCCCccccCCCccceeee
Q 003385 416 PSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYV 494 (824)
Q Consensus 416 ~~L~~L~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~L~~L~l 494 (824)
..|+.+.+.++..+ .-...|.++++|+.+.+. +.++.+... |.+|.+|+.++|.+| ++..-..+|.++++|+.+.|
T Consensus 265 ~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~i 341 (394)
T 4gt6_A 265 AYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAI 341 (394)
T ss_dssp SSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEE
T ss_pred ccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEE
Confidence 35666666554433 334456666777777664 345444443 667777777777654 44122346666777777776
Q ss_pred cccccccccccccccc---ceeccccCC
Q 003385 495 QNNMLSGTVPSSLLSK---NVVLNYAGN 519 (824)
Q Consensus 495 ~~N~l~g~ip~~l~~~---~~~l~~~~n 519 (824)
..+ ++ .|....|.. +..+.+.+|
T Consensus 342 p~s-v~-~I~~~aF~~C~~L~~i~~~~~ 367 (394)
T 4gt6_A 342 PSS-VT-KIPESAFSNCTALNNIEYSGS 367 (394)
T ss_dssp CTT-CC-BCCGGGGTTCTTCCEEEESSC
T ss_pred Ccc-cC-EEhHhHhhCCCCCCEEEECCc
Confidence 433 55 566555443 334444444
No 446
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=91.14 E-value=0.25 Score=53.68 Aligned_cols=91 Identities=15% Similarity=0.200 Sum_probs=70.3
Q ss_pred CceeEEEecCCCCCccCChhhhcccccccccccccccCCCCCC-CCCCCCcceEeecccccCCCCCccccCCCccceeee
Q 003385 416 PSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYV 494 (824)
Q Consensus 416 ~~L~~L~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~L~~L~l 494 (824)
..|+.+.+..+ ++..-...|.++.+|+.+.+..+ +..+... |.++++|+.+.+.+|.++..-..+|.++.+|+.+.|
T Consensus 240 ~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~l 317 (379)
T 4h09_A 240 KALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTL 317 (379)
T ss_dssp SSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEEC
T ss_pred ccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEc
Confidence 47888888776 66344567888999999999754 5555553 899999999999999998333468999999999999
Q ss_pred cccccccccccccccc
Q 003385 495 QNNMLSGTVPSSLLSK 510 (824)
Q Consensus 495 ~~N~l~g~ip~~l~~~ 510 (824)
..+ ++ .|+...|..
T Consensus 318 p~~-l~-~I~~~aF~~ 331 (379)
T 4h09_A 318 PTA-LK-TIQVYAFKN 331 (379)
T ss_dssp CTT-CC-EECTTTTTT
T ss_pred Ccc-cc-EEHHHHhhC
Confidence 654 77 777776643
No 447
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=90.06 E-value=0.97 Score=45.20 Aligned_cols=120 Identities=12% Similarity=0.091 Sum_probs=76.6
Q ss_pred CHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccccCCCCcee
Q 003385 683 TLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHVS 762 (824)
Q Consensus 683 sL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~ 762 (824)
+|.+.|.. .+.++++.+++.++.|.+.+|.-+-.+.. + ..+=+.|..|++..+|.+...+ ..+.
T Consensus 34 SL~eIL~~---~~~PlsEEqaWALc~Qc~~~L~~~~~~~~-~-~~~i~~~~~i~l~~dG~V~f~~-~~s~---------- 97 (229)
T 2yle_A 34 SLEEILRL---YNQPINEEQAWAVCYQCCGSLRAAARRRQ-P-RHRVRSAAQIRVWRDGAVTLAP-AADD---------- 97 (229)
T ss_dssp EHHHHHHH---HTSCCCHHHHHHHHHHHHHHHHHHHHTTC-C-CCCCCSGGGEEEETTSCEEECC-C-------------
T ss_pred cHHHHHHH---cCCCcCHHHHHHHHHHHHHHHHhhhhccc-C-CceecCCcceEEecCCceeccc-cccc----------
Confidence 68888753 36789999999999999999877622100 1 1233456889999999887764 1110
Q ss_pred ccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCC-CCCCCccccchhcHhhhhc
Q 003385 763 SIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQE-AISNEKFGANCRNIVQWVK 822 (824)
Q Consensus 763 ~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~-Pf~~~~~~~~~~~iv~~~~ 822 (824)
.....+.+||... ...+.+.=|||+|+++|.-+-=.. +=.....++...+++..|.
T Consensus 98 ---~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~e~eE~eLS~~LE~LL~~Mt 154 (229)
T 2yle_A 98 ---AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLKENEERELSPPLEQLIDHMA 154 (229)
T ss_dssp ------------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCCTTEEECCCHHHHHHHHHHT
T ss_pred ---ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCCcccchhhCHHHHHHHHHHH
Confidence 0123456788653 345678899999999999887444 4444556666777777664
No 448
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=89.27 E-value=0.26 Score=54.00 Aligned_cols=75 Identities=16% Similarity=0.205 Sum_probs=58.8
Q ss_pred CCCceeEEEecCCCCCccCChhhhcccccccccccccccCCCCCC-CCCCCCcceEeecccccCCCCCccccCCCcccee
Q 003385 414 PQPSITVIHLSSKNLTGNIPSDLTKLSSLVELWLDGNSLTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLREL 492 (824)
Q Consensus 414 ~~~~L~~L~L~~n~l~g~lp~~i~~L~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~L~~L 492 (824)
+..+|+.++|.++ ++..-...|.++++|+.+.|..| ++.+... |.+|++|+.++|..| ++ .+..+|.++++|+.+
T Consensus 318 ~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~-~~-~~~~~F~~c~~L~~I 393 (394)
T 4fs7_A 318 SCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR-LE-QYRYDFEDTTKFKWI 393 (394)
T ss_dssp TCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG-GG-GGGGGBCTTCEEEEE
T ss_pred CCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC-CE-EhhheecCCCCCcEE
Confidence 3458999999754 77334568999999999999877 7665554 999999999999865 44 456788899888865
No 449
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=85.84 E-value=2.7 Score=46.10 Aligned_cols=30 Identities=30% Similarity=0.524 Sum_probs=25.3
Q ss_pred CeEecCCCCCCEEE------cCCCcEEEEecCCccc
Q 003385 724 AIIHRDLKSSNILL------DKHMRAKVSDFGLSKF 753 (824)
Q Consensus 724 gIvHrDLkp~NILl------~~~~~vkL~DFGla~~ 753 (824)
.++|+|+.+.|||+ +++..++++||..|..
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 46899999999999 3457799999998754
No 450
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=76.60 E-value=5.9 Score=39.37 Aligned_cols=123 Identities=9% Similarity=0.091 Sum_probs=80.8
Q ss_pred HHHHHhhcCCCccceeeceeecCCeEEEEEEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHHHHHhCCCCCeE
Q 003385 647 EVTLLSRIHHRNLVQFLGYCQEEGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIEYLHTGCVPAII 726 (824)
Q Consensus 647 Ei~il~~l~HpnIv~l~~~~~~~~~~~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~gIv 726 (824)
|+.+|.. .||+.+.. .+-.+.+...+.++.-+.+ ..+ ..-+.++...+++++.+|+....+++.. +
T Consensus 36 el~LL~~-~~~~Fl~~-~I~e~eD~v~~~y~~~~~~--~~f-----~~ik~~~~~eKlr~l~ni~~l~~~~~~r-----~ 101 (215)
T 4ann_A 36 LMYLLEQ-HSPYFIDA-ELTELRDSFQIHYDINDNH--TPF-----DNIKSFTKNEKLRYLLNIKNLEEVNRTR-----Y 101 (215)
T ss_dssp GGGGGGS-CCTTBCCE-EEEECSSEEEEEECCCTTS--EEG-----GGGGGSCHHHHHHHHHHGGGGGGGGGSS-----E
T ss_pred HHHHHhc-cCCcccce-EEEEcccEEEEEEEcCccc--CCH-----HHHHhcCHHHHHHHHHHHHHHHHHhcCc-----e
Confidence 3444432 68888866 4555666666655544322 111 2335577888999999999888777765 7
Q ss_pred ecCCCCCCEEEcCCCcEEEEecCCcccccCCCCceeccccCCCCCcchhccccCCCCchHHHHHHHHHHHHHHcCCCCCC
Q 003385 727 HRDLKSSNILLDKHMRAKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAIS 806 (824)
Q Consensus 727 HrDLkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DIwSlGvil~elltG~~Pf~ 806 (824)
|--++|+||+++.++.+++.-.|+.....+ . ..+...=.-.+=|++..+++++..|+
T Consensus 102 tf~L~P~NL~f~~~~~p~i~~RGik~~l~P------------------~-----~~~ee~fL~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 102 TFVLAPDELFFTRDGLPIAKTRGLQNVVDP------------------L-----PVSEAEFLTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp ECCCSGGGEEECTTSCEEESCCEETTTBSC------------------C-----CCCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred EEEEecceEEEcCCCCEEEEEccCccCCCC------------------C-----CCCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 889999999999999999998886432211 1 11222223355677888888888775
No 451
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=74.01 E-value=0.37 Score=54.21 Aligned_cols=59 Identities=5% Similarity=0.022 Sum_probs=17.0
Q ss_pred hccccccCcEEEEEEEEcC-CcEEEE------EEeccCC--cccchhhhHHHHHHhhcCCCccceeeceee
Q 003385 606 EKKIGSGGFGVVYYGKLKD-GKEIAV------KVLTSNS--YQGKREFTNEVTLLSRIHHRNLVQFLGYCQ 667 (824)
Q Consensus 606 ~~~LG~G~fg~Vy~a~~~~-g~~vAV------K~l~~~~--~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~ 667 (824)
.+.|| ||+||+|.+.. ..+||| |..+... .+....+.+|..+++.++|||+++.+++..
T Consensus 147 ~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 147 YEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp TTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred cccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence 45666 99999998764 357888 6655322 222346788999999999999999988753
No 452
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=71.58 E-value=5.9 Score=39.48 Aligned_cols=83 Identities=7% Similarity=0.039 Sum_probs=59.5
Q ss_pred CCCccceeeceeecCCeEEEEEEecCCCCHHHHhhcccCccccCCHHHHHHHHHHHHHHHH-HHHhCCCCCeEecCCCCC
Q 003385 655 HHRNLVQFLGYCQEEGRSVLVYEFMHNGTLKEHLYGTLTHEQRINWIKRLEIAEDAAKGIE-YLHTGCVPAIIHRDLKSS 733 (824)
Q Consensus 655 ~HpnIv~l~~~~~~~~~~~lV~E~~~~gsL~~~L~~~~~~~~~l~~~~~~~i~~qia~gL~-yLH~~~~~gIvHrDLkp~ 733 (824)
.||.+ -..+-.+++...+.++--+++.-...+ +.++...+++++.+|+.... +++.. +|--++|+
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i-------~~~~~~eKlrll~nl~~L~~~~~~~r-----~tf~l~P~ 113 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAI-------RKTTLLSRIRAAIHLVSKVKHHSARR-----LIFIVCPE 113 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHH-------HTSCHHHHHHHHHHHHHHHSSCCSSS-----EECCCCGG
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHH-------HhcCHHHHHHHHHHHHHHHHHhhhCc-----eeEEEeCc
Confidence 67877 444446677777777765443222222 44677888888888887766 56554 78899999
Q ss_pred CEEEcCCCcEEEEecCCc
Q 003385 734 NILLDKHMRAKVSDFGLS 751 (824)
Q Consensus 734 NILl~~~~~vkL~DFGla 751 (824)
||+++.++.++|.-.|+-
T Consensus 114 NL~f~~~~~p~i~hRGi~ 131 (219)
T 4ano_A 114 NLMFNRALEPFFLHVGVK 131 (219)
T ss_dssp GEEECTTCCEEESCCEET
T ss_pred eEEEeCCCcEEEEEcCCc
Confidence 999999999999988864
No 453
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=51.14 E-value=3 Score=30.28 Aligned_cols=18 Identities=28% Similarity=0.412 Sum_probs=6.6
Q ss_pred hHHHHHHhhheeeeeecC
Q 003385 542 AAVLLLATVVSCLFMHKG 559 (824)
Q Consensus 542 ~~vl~l~~~l~~~~~~rr 559 (824)
+++++++.++.++++++|
T Consensus 21 v~~~~ii~~~~~~~~RRr 38 (44)
T 2ks1_B 21 LLLLLVVALGIGLFMRRR 38 (44)
T ss_dssp HHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHhhhh
Confidence 333333333333333333
No 454
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=42.26 E-value=2.5 Score=30.60 Aligned_cols=7 Identities=57% Similarity=0.881 Sum_probs=2.7
Q ss_pred Eeeehhh
Q 003385 535 IIGSSVG 541 (824)
Q Consensus 535 ii~~~v~ 541 (824)
+++.+++
T Consensus 14 Ia~~vVG 20 (44)
T 2jwa_A 14 IISAVVG 20 (44)
T ss_dssp HHHHHHH
T ss_pred hHHHHHH
Confidence 3333333
No 455
>1nrp_R Receptor based peptide NR'S; serine proteinase/receptor; 3.00A {Homo sapiens} PDB: 1nrn_R 1nrq_R*
Probab=35.71 E-value=13 Score=22.60 Aligned_cols=16 Identities=31% Similarity=0.846 Sum_probs=13.9
Q ss_pred CCccCCCCCCCCcccc
Q 003385 205 APVRYPDDPFDRIWES 220 (824)
Q Consensus 205 ~~irypdD~~dR~W~~ 220 (824)
...|-|+|.|.-+|+-
T Consensus 6 fllrnpndkyepfwed 21 (26)
T 1nrp_R 6 FLLRNPNDKYEPFWED 21 (26)
T ss_pred hhhcCCCcccCccccc
Confidence 3579999999999985
No 456
>1nro_R Receptor based peptide NRP; serine proteinase/receptor; 3.10A {Homo sapiens}
Probab=33.18 E-value=15 Score=22.50 Aligned_cols=17 Identities=29% Similarity=0.849 Sum_probs=14.3
Q ss_pred CCccCCCCCCCCccccC
Q 003385 205 APVRYPDDPFDRIWESD 221 (824)
Q Consensus 205 ~~irypdD~~dR~W~~~ 221 (824)
...|-|+|.|.-+|+-.
T Consensus 6 fllrnpndkyepfwede 22 (27)
T 1nro_R 6 FLLRNPNDKYEPFWEDE 22 (27)
T ss_pred ccccCCCcccCccccch
Confidence 35799999999999863
No 457
>2w3j_A Carbohydrate binding module; sugar-binding protein, family 35, uronic acid sugars; 1.70A {Uncultured bacterium}
Probab=28.61 E-value=3.3e+02 Score=24.58 Aligned_cols=88 Identities=13% Similarity=0.102 Sum_probs=53.0
Q ss_pred eeeecccCCceeEEEEEeeecccCCCCCCCceeEEeCCceeeeEeeCC-cCc---ceEEEEEEEecCCCceEEEecc-CC
Q 003385 89 CYKLDVITRTRYLIRATFLYGNFDNNNVYPKFDISLGPTHWSTIVISD-AAT---IEVRELIFLASSPKIDVCLSNA-TT 163 (824)
Q Consensus 89 cy~~~~~~~~~ylvr~~~~yg~~d~~~~~p~fd~~~~~~~w~~v~~~~-~~~---~~~~e~~~~~~~~~~~vcl~~~-~~ 163 (824)
-|++.+.+.|.|.|+..|.=|.. ..-.++|.|+|+.-.+|.... .+. ....--|.+ .+..-.+=|..+ +.
T Consensus 42 ~~~V~v~~aG~Y~l~~ryang~~----~~r~~~l~VNG~~~~~v~~p~Tg~W~~w~t~~~~v~L-~aG~ntI~l~~~~~~ 116 (145)
T 2w3j_A 42 VWSLSAASAKTYTAQIRFGNGGT----SARRATVVVNDSQIKTLDFPTNSNWTQWQTVNVDIPL-KAGTNSIKLVAETAD 116 (145)
T ss_dssp EEEEEESSCEEEEEEEEEECCSS----SCCCEEEEETTEEEEEECCCCCSCTTSCEEEEEEEEE-CSEEEEEEEEECSTT
T ss_pred EEEEECCCCeEEEEEEEEECCCC----CCeEEEEEECCeEeeEEEecCCCCCCeeEEEEEEEEE-CCCceEEEEEEecCc
Confidence 56777777899999887753322 234789999998776776532 111 121112333 333334555543 45
Q ss_pred CCceeeeeeeeecCCccc
Q 003385 164 GQPFISTLELRQFNGSVY 181 (824)
Q Consensus 164 ~~pfis~le~~~l~~~~y 181 (824)
|-|-|-.|+|.+.+....
T Consensus 117 g~~niD~i~v~~~~~~~~ 134 (145)
T 2w3j_A 117 GLANIDSIRVTGNGITPA 134 (145)
T ss_dssp CCCEEEEEEECSTTEEEC
T ss_pred CCEEEEEEEEEcCCCCCC
Confidence 679999999987665443
No 458
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=25.61 E-value=6.7e+02 Score=28.65 Aligned_cols=45 Identities=24% Similarity=0.146 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHH--HHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCc
Q 003385 700 WIKRLEIAEDAAK--GIEYLHTGCVPAIIHRDLKSSNILLDKHMRAKVSDFGLS 751 (824)
Q Consensus 700 ~~~~~~i~~qia~--gL~yLH~~~~~gIvHrDLkp~NILl~~~~~vkL~DFGla 751 (824)
+..+..+++.+|. .+.|+=.- +|=+++|||++.+|++.=+|||..
T Consensus 454 ~~a~~nF~~S~A~ySvv~YILGi-------gDRH~~NILld~tG~v~HIDFG~~ 500 (614)
T 3ls8_A 454 AEVMDTYVKSCAGYCVITYILGV-------GDRHLDNLLLTKTGKLFHIDFGYI 500 (614)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTC-------CCCCTTSEEECTTSCEEECCCSSC
T ss_pred HHHHHHHHHHHHHHhHhheeeec-------cCCCCcceeEcCCCCEeeeehHHh
Confidence 3445555555443 45566543 588899999999999999999986
No 459
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=22.83 E-value=1e+02 Score=26.19 Aligned_cols=44 Identities=18% Similarity=0.237 Sum_probs=26.1
Q ss_pred cCCCCCC-CCCCCCcceEeecccccCCCCCccccCCCccceeeecc
Q 003385 452 LTGPIPD-FSGCPDLRIIHLEDNQLTGPLPSSLMNLPNLRELYVQN 496 (824)
Q Consensus 452 l~~~~p~-~~~l~~L~~L~L~~N~l~g~lP~~l~~l~~L~~L~l~~ 496 (824)
++.+-.. |.+|++|+.+.|-.+ ++..=..+|.++.+|+.+.+..
T Consensus 8 vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 8 VVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred cCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 4444433 677777777777654 3312334677777777776654
Done!