BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003386
(824 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225445943|ref|XP_002263967.1| PREDICTED: DNA ligase 4-like [Vitis vinifera]
Length = 1162
Score = 1033 bits (2671), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 526/781 (67%), Positives = 628/781 (80%), Gaps = 18/781 (2%)
Query: 55 TGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAG 114
+GEPCWSL+A++VD+VE+FFK+T+ENRDEGIVLKDLGSKWEP DRSGKWLKLKPEY+ AG
Sbjct: 389 SGEPCWSLIAYDVDDVERFFKKTVENRDEGIVLKDLGSKWEPSDRSGKWLKLKPEYVHAG 448
Query: 115 SDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVV 174
SDLDVLIIGGYYGSGRRGGEVAQFLV LA+ PDTYPRRFISFCRVGTGLSD+ELDAVV
Sbjct: 449 SDLDVLIIGGYYGSGRRGGEVAQFLVGLADHSGPDTYPRRFISFCRVGTGLSDDELDAVV 508
Query: 175 TKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA 234
TKLKPYFRK EYPK+APPSFYQVTNNSKERPD+WI+SPEKSIILSITSDIRTIRSEVF+A
Sbjct: 509 TKLKPYFRKNEYPKKAPPSFYQVTNNSKERPDIWIDSPEKSIILSITSDIRTIRSEVFAA 568
Query: 235 PYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRK 294
PYSLRFPRID VRYDKPWH+CLDVQSF+ELVHSSNGTTQ+G +YG +QD KPK+ +SS+K
Sbjct: 569 PYSLRFPRIDCVRYDKPWHECLDVQSFMELVHSSNGTTQRGADYGRMQDSKPKRMKSSKK 628
Query: 295 GEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSM 354
GE+K +VPSHF+QTDV+++KGET IFS+M+FYFVN PP +SLDSLHK+VVENGGTFSM
Sbjct: 629 GEQKTAHVVPSHFMQTDVTNVKGETLIFSNMMFYFVNTPPTHSLDSLHKLVVENGGTFSM 688
Query: 355 NLNNSVTHCVAADNKGLKYEAAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKK 414
NLNNSVTHCVAA +KG+KY+AAK RGD+IH SWV DCCSQKKLL LQPKY+L LS+ SKK
Sbjct: 689 NLNNSVTHCVAAQSKGIKYQAAKLRGDIIHCSWVFDCCSQKKLLPLQPKYFLFLSEHSKK 748
Query: 415 KLQEEVDEFSDLYFWDLDLADIKQLLSNVDRSEDPKTIDYYKKKYCPQDKWSCFHGCCIY 474
KLQEE+D+FSD Y+ DLD++DIKQLLSNVDRS++ KTIDYYK KYCP++KWS FH CCI
Sbjct: 749 KLQEEIDKFSDSYYQDLDISDIKQLLSNVDRSDNSKTIDYYKNKYCPKEKWSRFHDCCIC 808
Query: 475 FYHSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNLANATHVVVLSVLGYDVNFNSLT 534
F+ S + + DWE+L LALRR+KLE+S GGKV NNL+ ATH+VV SV G+D++F+ +
Sbjct: 809 FHSSIQSSNSDWELLSKLALRRMKLEVSMGGGKVGNNLSQATHLVVFSVPGFDLDFSDIM 868
Query: 535 ESFTAREKHLLWNKKLHVVRSQWLEDCLAKEQKSEEYEYSLKPTGMQESYLELCEEDLDM 594
ESF+ EKHLL NKKLHVV QWLE CL + ++ +E +YSLKP G++ES C+ D+D+
Sbjct: 869 ESFSPAEKHLLCNKKLHVVGYQWLEGCLEEGRRLQEQKYSLKPEGLEESNFGECKHDIDV 928
Query: 595 EEPSSTLETSDKQNVSSFPDGDGKQRGTRGVSP-------ASPKREGKRKRGRPAGGSAK 647
E P S L++ + QN+ SFPD +GKQ RG +P ASPKR+ KRKRGRPAG S K
Sbjct: 929 EAP-SVLDSVENQNLVSFPDKEGKQ--GRGKAPPESISILASPKRDEKRKRGRPAGPSTK 985
Query: 648 KRKSTVNLARRKRPHVRNKPSKIYQNESDESNASDETEKKEE--INREENHEDREMDDEE 705
K K+ + ARR RP + KP KIY+NESD ASD EK EE NH ++ +E
Sbjct: 986 KGKAGFSQARRTRPRI-GKPPKIYENESD---ASDSGEKMEEEGTKMGGNHAIHGVECKE 1041
Query: 706 NLETRQTNVVEDLESLDRGKALQQEVVKDFGKEKQTVRAPDIEMRERYHSKDSETTDKQQ 765
E ++T +VED ES RGK ++EV D +EK RA DIE+ +S+ T+K +
Sbjct: 1042 CPEIQETEIVEDSESSQRGKTEEKEVALDNVREKWLDRAQDIELDSENKVDNSKKTEKLE 1101
Query: 766 --VDAVQAMLLDMIPSLGMKNEKTTNPIPKEESSSAEPSAEPTKKKKVSYKDIASKLLKD 823
VD VQAMLLDMIPSLG+K ++TNPI +E E AEP KKKKVSYKD+A LLKD
Sbjct: 1102 VMVDPVQAMLLDMIPSLGVKKAESTNPIIDDEKPPVEQGAEPVKKKKVSYKDVAGALLKD 1161
Query: 824 W 824
W
Sbjct: 1162 W 1162
>gi|297735473|emb|CBI17913.3| unnamed protein product [Vitis vinifera]
Length = 1163
Score = 1032 bits (2669), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 526/781 (67%), Positives = 628/781 (80%), Gaps = 18/781 (2%)
Query: 55 TGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAG 114
+GEPCWSL+A++VD+VE+FFK+T+ENRDEGIVLKDLGSKWEP DRSGKWLKLKPEY+ AG
Sbjct: 390 SGEPCWSLIAYDVDDVERFFKKTVENRDEGIVLKDLGSKWEPSDRSGKWLKLKPEYVHAG 449
Query: 115 SDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVV 174
SDLDVLIIGGYYGSGRRGGEVAQFLV LA+ PDTYPRRFISFCRVGTGLSD+ELDAVV
Sbjct: 450 SDLDVLIIGGYYGSGRRGGEVAQFLVGLADHSGPDTYPRRFISFCRVGTGLSDDELDAVV 509
Query: 175 TKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA 234
TKLKPYFRK EYPK+APPSFYQVTNNSKERPD+WI+SPEKSIILSITSDIRTIRSEVF+A
Sbjct: 510 TKLKPYFRKNEYPKKAPPSFYQVTNNSKERPDIWIDSPEKSIILSITSDIRTIRSEVFAA 569
Query: 235 PYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRK 294
PYSLRFPRID VRYDKPWH+CLDVQSF+ELVHSSNGTTQ+G +YG +QD KPK+ +SS+K
Sbjct: 570 PYSLRFPRIDCVRYDKPWHECLDVQSFMELVHSSNGTTQRGADYGRMQDSKPKRMKSSKK 629
Query: 295 GEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSM 354
GE+K +VPSHF+QTDV+++KGET IFS+M+FYFVN PP +SLDSLHK+VVENGGTFSM
Sbjct: 630 GEQKTAHVVPSHFMQTDVTNVKGETLIFSNMMFYFVNTPPTHSLDSLHKLVVENGGTFSM 689
Query: 355 NLNNSVTHCVAADNKGLKYEAAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKK 414
NLNNSVTHCVAA +KG+KY+AAK RGD+IH SWV DCCSQKKLL LQPKY+L LS+ SKK
Sbjct: 690 NLNNSVTHCVAAQSKGIKYQAAKLRGDIIHCSWVFDCCSQKKLLPLQPKYFLFLSEHSKK 749
Query: 415 KLQEEVDEFSDLYFWDLDLADIKQLLSNVDRSEDPKTIDYYKKKYCPQDKWSCFHGCCIY 474
KLQEE+D+FSD Y+ DLD++DIKQLLSNVDRS++ KTIDYYK KYCP++KWS FH CCI
Sbjct: 750 KLQEEIDKFSDSYYQDLDISDIKQLLSNVDRSDNSKTIDYYKNKYCPKEKWSRFHDCCIC 809
Query: 475 FYHSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNLANATHVVVLSVLGYDVNFNSLT 534
F+ S + + DWE+L LALRR+KLE+S GGKV NNL+ ATH+VV SV G+D++F+ +
Sbjct: 810 FHSSIQSSNSDWELLSKLALRRMKLEVSMGGGKVGNNLSQATHLVVFSVPGFDLDFSDIM 869
Query: 535 ESFTAREKHLLWNKKLHVVRSQWLEDCLAKEQKSEEYEYSLKPTGMQESYLELCEEDLDM 594
ESF+ EKHLL NKKLHVV QWLE CL + ++ +E +YSLKP G++ES C+ D+D+
Sbjct: 870 ESFSPAEKHLLCNKKLHVVGYQWLEGCLEEGRRLQEQKYSLKPEGLEESNFGECKHDIDV 929
Query: 595 EEPSSTLETSDKQNVSSFPDGDGKQRGTRGVSP-------ASPKREGKRKRGRPAGGSAK 647
E P S L++ + QN+ SFPD +GKQ RG +P ASPKR+ KRKRGRPAG S K
Sbjct: 930 EAP-SVLDSVENQNLVSFPDKEGKQ--GRGKAPPESISILASPKRDEKRKRGRPAGPSTK 986
Query: 648 KRKSTVNLARRKRPHVRNKPSKIYQNESDESNASDETEKKEE--INREENHEDREMDDEE 705
K K+ + ARR RP + KP KIY+NESD ASD EK EE NH ++ +E
Sbjct: 987 KGKAGFSQARRTRPRI-GKPPKIYENESD---ASDSGEKMEEEGTKMGGNHAIHGVECKE 1042
Query: 706 NLETRQTNVVEDLESLDRGKALQQEVVKDFGKEKQTVRAPDIEMRERYHSKDSETTDKQQ 765
E ++T +VED ES RGK ++EV D +EK RA DIE+ +S+ T+K +
Sbjct: 1043 CPEIQETEIVEDSESSQRGKTEEKEVALDNVREKWLDRAQDIELDSENKVDNSKKTEKLE 1102
Query: 766 --VDAVQAMLLDMIPSLGMKNEKTTNPIPKEESSSAEPSAEPTKKKKVSYKDIASKLLKD 823
VD VQAMLLDMIPSLG+K ++TNPI +E E AEP KKKKVSYKD+A LLKD
Sbjct: 1103 VMVDPVQAMLLDMIPSLGVKKAESTNPIIDDEKPPVEQGAEPVKKKKVSYKDVAGALLKD 1162
Query: 824 W 824
W
Sbjct: 1163 W 1163
>gi|224144326|ref|XP_002325262.1| predicted protein [Populus trichocarpa]
gi|222866696|gb|EEF03827.1| predicted protein [Populus trichocarpa]
Length = 1242
Score = 957 bits (2474), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 512/847 (60%), Positives = 604/847 (71%), Gaps = 86/847 (10%)
Query: 56 GEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS 115
GEP SL+A+NVD++EKFFKETIENRDEGIVLKDLGSKWEP DRSGKWLKLKPEYIRAGS
Sbjct: 399 GEPYCSLIAYNVDDIEKFFKETIENRDEGIVLKDLGSKWEPSDRSGKWLKLKPEYIRAGS 458
Query: 116 DLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVT 175
DLDVLIIGGYYGSGRRGGEVAQFL+ LAERPA +TYPRRFISFCRVG GLSDEELD VV+
Sbjct: 459 DLDVLIIGGYYGSGRRGGEVAQFLLGLAERPASNTYPRRFISFCRVGNGLSDEELDTVVS 518
Query: 176 KLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP 235
KLKPYFRK EYPK +PPSFYQVTNNSKERPDVWIE+P+KSIILSITSDIRTI SEVFSAP
Sbjct: 519 KLKPYFRKNEYPKNSPPSFYQVTNNSKERPDVWIENPDKSIILSITSDIRTISSEVFSAP 578
Query: 236 YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKG 295
YSLRFPRIDRVRYDKPWH+CLDVQSFVELVHSSNGTTQKGK YG +QD KP +SSRKG
Sbjct: 579 YSLRFPRIDRVRYDKPWHECLDVQSFVELVHSSNGTTQKGKGYGYVQDSKPTHIKSSRKG 638
Query: 296 EKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMN 355
EKK+VS+VPSH +QTD+SDIKGET IFS+M+FYFVNVPP+ SL+SLHKMV ENGGTFSMN
Sbjct: 639 EKKSVSVVPSHLIQTDISDIKGETLIFSNMMFYFVNVPPSNSLESLHKMVAENGGTFSMN 698
Query: 356 LNNSVTHCVAADNKGLKYEAAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKK 415
LNNSVTHC+AA++KG+KY+AAK GD+IHYSWVLDCC QKKLL LQPK +L LSD SKKK
Sbjct: 699 LNNSVTHCIAAESKGIKYQAAKLHGDIIHYSWVLDCCLQKKLLPLQPKSFLFLSDGSKKK 758
Query: 416 LQEEVDEFSDLYFWDLDLADIKQLLSNVDRSEDPKTIDYYKKKYCPQDKWSCFHGCCIYF 475
L EE+DEFSD Y+WDLDL+DIKQLLSN++ SED K ID K+KYCP++KWS FHGCC+YF
Sbjct: 759 LHEEIDEFSDSYYWDLDLSDIKQLLSNINASEDAKAIDDLKQKYCPEEKWSLFHGCCVYF 818
Query: 476 YHSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNLANATHVVVLSVLGYDVNFNSLTE 535
+ S E L+PDWE LLGLA RRLKLEI GGKV NN+A+ATH+VVL V DV+F SL +
Sbjct: 819 HISRESLTPDWESLLGLAFRRLKLEIFMGGGKVSNNIAHATHLVVLIVPASDVDFGSLVK 878
Query: 536 SFTAREKHLLWNKKLHVVRSQWLEDCLAKEQKSEEYEYSLKPTGMQESYLELCEE----- 590
SFT EKH L NK+L+V+ SQWLED L + QK E Y+LKP+G++ES C+E
Sbjct: 879 SFTTAEKHFLLNKRLYVIGSQWLEDSLERGQKLLEDTYNLKPSGLEESN---CKEVLPSV 935
Query: 591 -DLDMEEPSSTLETSDKQNVSSF----------PDGDGKQRGTRGVSPASPKR------- 632
D + +E S D + S P G ++G G A R
Sbjct: 936 TDSEAKEKGSKAALKDSNKLGSLEKETTRKRGRPAGGSTKKGKIGAGQARRTRARIVNKP 995
Query: 633 ------------------------------EGKRKRGRPAGGSAKKRKSTVNLARRKRPH 662
G + GRPAGGS KK K A R R
Sbjct: 996 AKISVEKSDESCSHDDKNEENDMSDGNEEIHGGKPAGRPAGGSTKKGKIGAGQALRTRTR 1055
Query: 663 VRNKPSKIYQNESDESNASDETEKKEEINREENHEDREMDDEENLETRQTNVVEDLESLD 722
+ NKP+KI + +S+ES D+ ++ E++ E N E + NL+ +QT VED ES
Sbjct: 1056 IANKPAKILEEKSEESCLHDDEIEENEMS-EGNEEIHGPVSKYNLDIQQTKTVEDSESSR 1114
Query: 723 RGKALQQEVVKDFGKEKQTVRAPDIEMRERYHSKDSETTDKQQ--VDAVQAMLLDMIPSL 780
R KA ++E ++ E+ +APD+EM ERY+ + +E +K + VD V A+L+DMIPSL
Sbjct: 1115 RDKA-KEETAEENRHEEWLDKAPDVEMSERYYDQVTEKPEKLEVMVDPVHAILMDMIPSL 1173
Query: 781 GMKNEKTTNPIPKEESSSAEPSAEPT--------------------------KKKKVSYK 814
GMK +TTNP E + P A+P+ KKKVSYK
Sbjct: 1174 GMKKGETTNPTIGNEKQAEGPYAQPSLSMKKVENTTPTLDTEKPSENPSLLPVKKKVSYK 1233
Query: 815 DIASKLL 821
D+A+KLL
Sbjct: 1234 DLAAKLL 1240
>gi|356556242|ref|XP_003546435.1| PREDICTED: DNA ligase 4-like [Glycine max]
Length = 1171
Score = 937 bits (2421), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 489/792 (61%), Positives = 604/792 (76%), Gaps = 31/792 (3%)
Query: 55 TGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAG 114
+GEPCWS +AHNVDEVE+FFKETIENRDEGIVLKD SKWEP DRSGKWLKLKPEYI+AG
Sbjct: 389 SGEPCWSFIAHNVDEVERFFKETIENRDEGIVLKDHSSKWEPSDRSGKWLKLKPEYIQAG 448
Query: 115 SDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVV 174
SDLDVLIIGGYYGSGRRGGEVAQFLV LAERP+P+T+P++FISFCRVGTGLSD+ELDAVV
Sbjct: 449 SDLDVLIIGGYYGSGRRGGEVAQFLVGLAERPSPNTHPKQFISFCRVGTGLSDDELDAVV 508
Query: 175 TKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA 234
TKLKPYFRKYEYPK+ PPSFYQVTN+SKERPDVW++SPEKSIILSITSDIRTI SEVFSA
Sbjct: 509 TKLKPYFRKYEYPKKRPPSFYQVTNHSKERPDVWVDSPEKSIILSITSDIRTIESEVFSA 568
Query: 235 PYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRK 294
PYSLRFPRIDRVRYDK W++CLDVQSF+ELVHSSNGTTQ+ EYG QD KPK+ +SS +
Sbjct: 569 PYSLRFPRIDRVRYDKAWYECLDVQSFIELVHSSNGTTQRDTEYGSKQDSKPKRSKSSTR 628
Query: 295 GEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSM 354
GEKKN+SIVPSH +QTDVS IKG + IFS+M+FYFVNVP ++SL+SLHK++ ENGGTFSM
Sbjct: 629 GEKKNLSIVPSHLIQTDVSSIKGGSLIFSNMMFYFVNVPLSHSLESLHKIIAENGGTFSM 688
Query: 355 NLNNSVTHCVAADNKGLKYEAAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKK 414
NLNNSVTHCVAAD+KG K+EAAKR GD+IHYSWVLDC QKKL+ LQPKY+L LS+ +KK
Sbjct: 689 NLNNSVTHCVAADSKGFKFEAAKRHGDIIHYSWVLDCYDQKKLVCLQPKYFLFLSELTKK 748
Query: 415 KLQEEVDEFSDLYFWDLDLADIKQLLSNVDRSEDPKTIDYYKKKYCPQDKWSCFHGCCIY 474
KLQEE+DEFSD Y+ DLDL IKQLLSN+DRSED T+D+Y+KKYCP+DKWS F+GC IY
Sbjct: 749 KLQEEIDEFSDTYYLDLDLGVIKQLLSNIDRSEDVSTVDHYRKKYCPKDKWSFFYGCSIY 808
Query: 475 FYHSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNLANATHVVVLSVLGYDVNFNSLT 534
F+ + L DW +L LA+RRLKLE+ GGKV +NL ATH+VVL V GY +F +
Sbjct: 809 FHSAIPSLKSDWHFILQLAVRRLKLEVLMGGGKVTSNLTCATHLVVLLVPGYQTDFEQIQ 868
Query: 535 ESFTAREKHLLWNKKLHVVRSQWLEDCLAKEQKSEEYEYSLKPTGMQESYLELCEEDLDM 594
SFT+ ++ +L +K+LH+V+SQWLEDC Q+ E YSLKP G++E+ E CE +L +
Sbjct: 869 SSFTSVKRKILRSKRLHIVKSQWLEDCSDSCQRLPEDSYSLKPWGIEETTAEDCELELGL 928
Query: 595 EEPSSTLETSDKQNVSSFPDGDGKQRGTRGVSP-----ASPKREGKRKRGRPAGGSAKK- 648
E S D QN+ SF D +QR ++ S S ++ GKRKRGRPAG KK
Sbjct: 929 EAHQSGDNVED-QNI-SFSDKGIQQRSSKAASEDSMALVSQEKGGKRKRGRPAGSGIKKV 986
Query: 649 RKSTVNLARRKRPHVRNKPSKIYQNE-SDESNASDETEKKEEINR--------EENHEDR 699
++ V ARR RP + KP+KI + E SDES++ + ++EI+ ++ E +
Sbjct: 987 KQPAVKQARRARPQIAKKPAKICEYESSDESDSHGKRPIEQEIDTRAGSLDFYKKRSEPQ 1046
Query: 700 EMDDEENLETRQTNVVEDLESLDRGKALQQEVVKDFGKEKQTVRAPDIEMRERYHSKDSE 759
E + EN++ + + LD+ K L E++ + P+IEM +R++ +++E
Sbjct: 1047 ETEKRENVQVAEIEKNSEQNKLDKQKDLND-------NERERMLVPEIEMSDRHNEQNNE 1099
Query: 760 TTDKQQV--DAVQAMLLDMIPSLG-MKNEKTTNPIPKE----ESSSAEPSAEPTKKKKVS 812
T+K ++ D +QAML DMIPSL K E+ N +E E+S+AE TKKKKVS
Sbjct: 1100 VTEKLEISADPLQAMLFDMIPSLATQKVEQPMNRSVREEKLPETSNAEAEPMTTKKKKVS 1159
Query: 813 YKDIASKLLKDW 824
YKD+AS+LLKDW
Sbjct: 1160 YKDVASELLKDW 1171
>gi|112732548|dbj|BAF03051.1| DNA ligase IV [Populus nigra]
Length = 1319
Score = 924 bits (2387), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/920 (55%), Positives = 610/920 (66%), Gaps = 155/920 (16%)
Query: 56 GEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS 115
GEP SL+A+NVD++EKFFKETIENRDEGIVLKDLGSKWEP DRSGKWLKLKPEYIRAGS
Sbjct: 399 GEPYCSLIAYNVDDIEKFFKETIENRDEGIVLKDLGSKWEPSDRSGKWLKLKPEYIRAGS 458
Query: 116 DLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVT 175
DLDVLIIGGYYGSGRRGGEVAQFL+ LAE PA +TYPRRFISFCRVG GLS+EELD VV+
Sbjct: 459 DLDVLIIGGYYGSGRRGGEVAQFLLGLAECPASNTYPRRFISFCRVGNGLSNEELDTVVS 518
Query: 176 KLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP 235
KLKPYFRK EYPK +PPSFYQVTNNSKERPDVWIE+P+KSIILSITSDIRTI SEVFSAP
Sbjct: 519 KLKPYFRKNEYPKNSPPSFYQVTNNSKERPDVWIENPDKSIILSITSDIRTISSEVFSAP 578
Query: 236 YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKG 295
YSLRFPRIDRVRYDKPWH+CLDVQSFVELVHSSNGTTQKGK YG +QD KP +SSRKG
Sbjct: 579 YSLRFPRIDRVRYDKPWHECLDVQSFVELVHSSNGTTQKGKGYGDVQDSKPTHIKSSRKG 638
Query: 296 EKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMN 355
EKK+VS+VPSH +QTD+SDIKGET IFS+M+FY VNVPP+ SL+SLHKMV ENGGTFSMN
Sbjct: 639 EKKSVSVVPSHLIQTDISDIKGETLIFSNMMFYVVNVPPSNSLESLHKMVAENGGTFSMN 698
Query: 356 LNNSVTHCVAADNKGLKYEAAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKK 415
LNNSVTHC+AA++KG+KY+AAK GD+IHYSWVLDCC QKKLL LQPK +L LSD SKKK
Sbjct: 699 LNNSVTHCIAAESKGIKYQAAKLHGDIIHYSWVLDCCLQKKLLPLQPKSFLFLSDGSKKK 758
Query: 416 LQEEVDEFSDLYFWDLDLADIKQLLSNVDRSEDPKTIDYYKKKYCPQDKWSCFHGCCIYF 475
L EE+DEFSD Y+WDLDL+DIKQLLSN++ SED K ID K+KYCP++KWS FHGCC+YF
Sbjct: 759 LHEEIDEFSDSYYWDLDLSDIKQLLSNINASEDGKAIDDLKQKYCPEEKWSLFHGCCVYF 818
Query: 476 YHSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNLANATHVVVLSVLGYDVNFNSLTE 535
+ S E L+PDWE LLGLA RRLKLEI GGKV NN+A+ATH+VVL+V DV+F SL +
Sbjct: 819 HISRESLTPDWESLLGLAFRRLKLEIFMGGGKVSNNIAHATHLVVLNVPASDVDFGSLVK 878
Query: 536 SFTAREKHLLWNKKLHVVRSQWLEDCLAKEQKSEEYEYSLKPTGMQESYLE--LCEEDL- 592
SFT EKH L NK+L+V+ SQWLED L + QK E Y+LKP+G++ES + +C+ D+
Sbjct: 879 SFTTAEKHFLLNKRLYVIGSQWLEDSLERGQKLLEDTYNLKPSGLEESNCKEIVCDLDME 938
Query: 593 --------------------DMEEPSSTLETSDKQNVSSF----------PDGDGKQRGT 622
+ +E S D + S P G ++G
Sbjct: 939 EATPISDGAKNERLPSVTDSEAKEKGSKAALKDSNKLGSLEKETTRKRGRPAGGSTKKGK 998
Query: 623 RGVSPASPKR-------------------------------EGKRK--RGRPAGGSAKKR 649
G A R +G + G+PAGG KKR
Sbjct: 999 IGAGQAQRTRARIVNKPAKISVEKSDESCSQDDKNEENDMSDGNEEIHGGKPAGGITKKR 1058
Query: 650 KSTVNLARRKRPHVRNKPSKIYQNESDESNASDETEKKEEINR----------------- 692
K LARR R + NKP+K + + DES DE ++ E++
Sbjct: 1059 KMGAGLARRTRACIVNKPAKTSEEKPDESCCHDEKSEENEMSEGSYEIHGGRPAGGSTRK 1118
Query: 693 -----------------------EENHEDREMDDEE--------------------NLET 709
EE E+ + D+E NL+
Sbjct: 1119 GKIGAGQARRTRTRIANKPAKILEEKSEESCLHDDEIEENEMSEGNEEIHGPDSKYNLDI 1178
Query: 710 RQTNVVEDLESLDRGKALQQEVVKDFGKEKQTVRAPDIEMRERYHSKDSETTDKQQ--VD 767
+QT +VED ES RGKA ++ ++ E+ +APD+EM RY+ + +E +K + VD
Sbjct: 1179 QQTKMVEDSESSRRGKA-KEATAEENRHEEWLDKAPDVEMSGRYYDQVTEKPEKLEVMVD 1237
Query: 768 AVQAMLLDMIPSLGMKNEKTTNPIPKEESSSAEPSAE------------PT--------- 806
V A+L+DMIPSLGMK +TTNP E + P A+ PT
Sbjct: 1238 PVHAILMDMIPSLGMKKGETTNPTIDNEKQAEGPYAQSSLSMKKVENTTPTLDTEKPAEN 1297
Query: 807 -----KKKKVSYKDIASKLL 821
KKKVSYKD+A+KLL
Sbjct: 1298 PSLLPVKKKVSYKDLAAKLL 1317
>gi|357449599|ref|XP_003595076.1| DNA ligase [Medicago truncatula]
gi|355484124|gb|AES65327.1| DNA ligase [Medicago truncatula]
Length = 1244
Score = 884 bits (2285), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/792 (57%), Positives = 574/792 (72%), Gaps = 32/792 (4%)
Query: 55 TGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAG 114
+GEPCWS +AHN +EVE+FFKETIENR+EGIV+KDL SKWEP DRSGKWLKLKP+Y+ AG
Sbjct: 398 SGEPCWSFIAHNAEEVERFFKETIENREEGIVVKDLSSKWEPSDRSGKWLKLKPDYVHAG 457
Query: 115 SDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVV 174
SDLDVLIIGGYYGSGR GGEVAQFLV LAERP+P+T+P+RFIS CRVGTGLSD+EL+AVV
Sbjct: 458 SDLDVLIIGGYYGSGRHGGEVAQFLVGLAERPSPNTHPKRFISLCRVGTGLSDDELEAVV 517
Query: 175 TKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA 234
TKLKPYFRKY PK +PPSFYQVTN+SKERPDVW++SPEKSIILS+TSDIRTI SE F+A
Sbjct: 518 TKLKPYFRKY--PKTSPPSFYQVTNHSKERPDVWVDSPEKSIILSVTSDIRTIESEAFAA 575
Query: 235 PYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRK 294
PYSLRFPRIDRVRYDK WH+CLDVQSF+ELV S NGTTQ+ EYG +D KPK+ +SS +
Sbjct: 576 PYSLRFPRIDRVRYDKDWHECLDVQSFIELVQSGNGTTQRNTEYGSNKDSKPKRMKSSTR 635
Query: 295 GEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVF-------YFVNVPPAYSLDSLHKMVVE 347
GEKKN+S VPSH QTDVS + G + +FS+M+F FVNVPP++SL+S HK+V E
Sbjct: 636 GEKKNMSTVPSHLSQTDVSSVTGGSLMFSNMMFCILKNLANFVNVPPSHSLESFHKLVAE 695
Query: 348 NGGTFSMNLNNSVTHCVAADNKGLKYEAAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLH 407
NGGTFSMNLNN+VTHCVAAD+KG K+EAAKRRGD+IHY+WVLDCC+QKKL+ L KY+L
Sbjct: 696 NGGTFSMNLNNAVTHCVAADSKGFKFEAAKRRGDIIHYTWVLDCCAQKKLIPLHLKYFLF 755
Query: 408 LSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNVDRSEDPKTIDYYKKKYCPQDKWSC 467
LS+ +KKKLQE++DEFSD Y+ DLDL DIKQLLSN++RSED T+D+Y+KKYCP+DKWS
Sbjct: 756 LSELTKKKLQEDIDEFSDSYYLDLDLGDIKQLLSNINRSEDVSTVDHYRKKYCPKDKWSI 815
Query: 468 FHGCCIYFYHSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNLANATHVVVLSVLGYD 527
F+GC IYF + L DW++LL L+ +R K+E+ GGKV +NL +ATHVV L +
Sbjct: 816 FNGCSIYFRTTMPSLKEDWQILLELSSKRFKVEVLMGGGKVTSNLNSATHVVALFLPSCH 875
Query: 528 VNF-NSLTESFTAREKHLLWNKKLHVVRSQWLEDCLAKEQKSEEYEYSLKPTGMQESYLE 586
N+ + + SFT+ E+ LL K+LH++ S+WLEDCL Q+ E YS+KP G++ES E
Sbjct: 876 TNYEDEIQSSFTSVERKLLGRKRLHIINSKWLEDCLNSCQRLSEDTYSIKPYGIEESTSE 935
Query: 587 LCEEDLDMEEPSSTLETSDKQNVSSFPDGDGKQRGTRGVSP-----ASPKREGKRKRGRP 641
CE L ++ + + QNVS G KQ + S AS + G RKRGRP
Sbjct: 936 DCEHALAVDAHLIKKDNVEDQNVSISNKG-SKQSSVKAASEDSLTLASQAKVGPRKRGRP 994
Query: 642 AGGSAKKRKSTVNLARRKRPHVRNKPSKIYQNESDESNASDETEKKEEINREENHEDREM 701
G S K K+ N ARR R + K +KI + ESDES++ D+ ++E + E D
Sbjct: 995 PGRSITKIKTDTNQARRVRSQIAKKRAKISEYESDESDSLDKRPYEQEADNVEGSLDFHY 1054
Query: 702 DDEENLETRQTNVV----EDLESLDRGKALQQEVVKDFGKEKQTVRAPDIEMRERYHSKD 757
+ ET + + V E +ES ++ K + E KD E V P+IEM++ + +
Sbjct: 1055 VRSQPHETEKIHNVQGGTEGVESSEQNKGIGLEDFKDNQHENMFV--PEIEMKDADNDQS 1112
Query: 758 SETTDKQQV--DAVQAMLLDMIPSLGM------KNEKTTNPIPKEESSSAEPSAEPTKKK 809
S+ T+K ++ D VQAMLLDMIP L M +N P E S+ EPS+ TKKK
Sbjct: 1113 SQVTEKLEIMTDPVQAMLLDMIPGLSMNKVEQPRNHHVEAEKPP-EISNEEPSS-TTKKK 1170
Query: 810 KVSYKDIASKLL 821
KVS+K +A + L
Sbjct: 1171 KVSFKALADEPL 1182
>gi|297796605|ref|XP_002866187.1| ATLIG4 [Arabidopsis lyrata subsp. lyrata]
gi|297312022|gb|EFH42446.1| ATLIG4 [Arabidopsis lyrata subsp. lyrata]
Length = 1221
Score = 835 bits (2157), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/852 (53%), Positives = 582/852 (68%), Gaps = 104/852 (12%)
Query: 55 TGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAG 114
+GEP WS+V H +VE+FFKET+ENRDEG+VLKDLGSKWEPGDRSGKWLKLKPEYIRAG
Sbjct: 392 SGEPSWSIVVHAAADVERFFKETVENRDEGVVLKDLGSKWEPGDRSGKWLKLKPEYIRAG 451
Query: 115 SDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVV 174
+DLDVLIIGGYYGSGRRGGEVAQFLVALA+R + YPRRF+SFCRVGTGLSD+EL+ VV
Sbjct: 452 TDLDVLIIGGYYGSGRRGGEVAQFLVALADRAEANVYPRRFMSFCRVGTGLSDDELNTVV 511
Query: 175 TKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA 234
+KLKPYFRK E+PK+APPSFYQVTN+SKERPDVWIESPEKSIILSITSDIRTIRSEVF A
Sbjct: 512 SKLKPYFRKNEHPKKAPPSFYQVTNHSKERPDVWIESPEKSIILSITSDIRTIRSEVFVA 571
Query: 235 PYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRK 294
PYSLRFPRID+VRYDK WH+CLDVQ+FVELV+SSNGTTQK KE QD+ PK +SS+K
Sbjct: 572 PYSLRFPRIDKVRYDKSWHECLDVQAFVELVNSSNGTTQKQKESESTQDN-PKVNKSSKK 630
Query: 295 GEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSM 354
GEKKNVS+VPS F+QTDVSDIKG+TS+FS+M+FYFVNVP ++SL++ HK VVENGG FSM
Sbjct: 631 GEKKNVSLVPSQFIQTDVSDIKGKTSVFSNMIFYFVNVPLSHSLETFHKTVVENGGKFSM 690
Query: 355 NLNNSVTHCVAADNKGLKYEAAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKK 414
NLNNSVTHC+AA++ G+KY+AAKR+ DVIH+SWVLDCCS+ K+L LQPKY+LHL+D+S+
Sbjct: 691 NLNNSVTHCIAAESSGIKYQAAKRQRDVIHFSWVLDCCSRNKMLPLQPKYFLHLTDASRT 750
Query: 415 KLQEEVDEFSDLYFWDLDLADIKQLLSNVDRSEDPKTIDYYKKKYCPQDKWSCFHGCCIY 474
KLQ+++DEFSD Y+WDLDL +KQ+LSN +SED K+IDYYKKK CP+ +WSC CC+Y
Sbjct: 751 KLQDDIDEFSDSYYWDLDLEGLKQVLSNAKQSEDSKSIDYYKKKLCPEKRWSCLFSCCVY 810
Query: 475 FYHSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNLANATHVVVLSVLGYDVNFNSLT 534
FY ++ LS + E LLG+ +RL LE+ GGKV NNLA+A+H+VVL++ ++F S++
Sbjct: 811 FYPYSQTLSTEEEALLGIMAKRLALEVLMGGGKVSNNLAHASHLVVLTMAEKSLDFASVS 870
Query: 535 ESFTAREKHLLWNKKLHVVRSQWLEDCLAKEQKSEEYEYSLKPTGMQESYLE-------- 586
+SF+ EK LL K+LHVV S+WLED L +E+K E Y+L+P M+ES E
Sbjct: 871 KSFSEMEKRLLLKKRLHVVSSRWLEDSLQREEKLCEDVYNLRPKYMEESDTEESDKSEHD 930
Query: 587 ----LCEEDLDMEEPSSTLETSDKQNVSSFPDGDGKQRGTRGVSPASPKREGKRKRGR-P 641
E EEPSS+ K ++S + RG S + + +R+RG+ P
Sbjct: 931 TTEVASEGSAQTEEPSSS-----KMTITSSRGRSTTRAVKRGRSSTNSLQRVQRRRGKQP 985
Query: 642 A----------------------------------------GGSAKKRKSTVNLARR-KR 660
+ G SAK+ KS V +R +R
Sbjct: 986 SKITGDETEESDAAEEKVSTRLSDIAEETDSFGEAQRNSSRGRSAKRGKSRVGQTQRVQR 1045
Query: 661 PHVRNKPSKIYQNESDESNASDETEKKEEINREENHEDREMDDEENLETRQTNVVEDLES 720
KPSKI +ES+E +DE K ++ + + EN ETR+ ++ + ES
Sbjct: 1046 SRRGKKPSKIGGDESEE---NDEFGDKNNVSSDAQESNAAGRSVENEETREPDIAKYTES 1102
Query: 721 LDRGKALQQEVVKDFGKEKQTVRAPDIEMRERYHSKDSETTDKQQVDAVQAMLLDMIPSL 780
L R V+D ++ + + +++M+E+ K D +QAML++M PSL
Sbjct: 1103 LQRDNT---AAVEDASQDSKNAKT-EMDMKEKL---------KIHEDPLQAMLMNMFPSL 1149
Query: 781 GMKNEKTTNPIPKE----------ESS----------------SAEPSAEP--TKKKKVS 812
KN +T+N I E ESS + A P KKKKVS
Sbjct: 1150 SQKNTETSNRITGENRKANVSGECESSEKRKLDAETDSTCVNAGTDSEAVPPLVKKKKVS 1209
Query: 813 YKDIASKLLKDW 824
Y+D+A +LLKDW
Sbjct: 1210 YRDVAGELLKDW 1221
>gi|449463583|ref|XP_004149513.1| PREDICTED: DNA ligase 4-like [Cucumis sativus]
Length = 1214
Score = 827 bits (2137), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/838 (54%), Positives = 571/838 (68%), Gaps = 69/838 (8%)
Query: 50 MAADQTGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPE 109
+ +D G P WS+ A+NVD+VE+FFK TIENRDEGIV+KDLGSKWEPGDRSGKWLKLKP+
Sbjct: 383 LNSDCAGYPSWSIRAYNVDDVERFFKSTIENRDEGIVIKDLGSKWEPGDRSGKWLKLKPD 442
Query: 110 YIRAGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEE 169
Y+RAGSDLD LIIGGYYGSGRRGGEVAQFL+ LAERP + YPRRF+SFCRVGTGL+DEE
Sbjct: 443 YVRAGSDLDALIIGGYYGSGRRGGEVAQFLMGLAERPPSNAYPRRFVSFCRVGTGLTDEE 502
Query: 170 LDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRS 229
LDAVV KLKPYFRK EYP++ PSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTI+S
Sbjct: 503 LDAVVNKLKPYFRKSEYPRKTAPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIKS 562
Query: 230 EVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQF 289
EVF+APYSLRFPRIDRVRYDKPWH+CLDVQSFVELVHSSNGTTQ+G G QD K K
Sbjct: 563 EVFAAPYSLRFPRIDRVRYDKPWHECLDVQSFVELVHSSNGTTQRGTNNSGRQDSKGKYI 622
Query: 290 RSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENG 349
+S KG KK+VS+VPSH LQTD++ I ++ IFS+M+FY VNVPP +SLDSLHK++VENG
Sbjct: 623 KSIGKGRKKSVSVVPSHLLQTDITGITEDSLIFSNMLFYIVNVPPTHSLDSLHKLIVENG 682
Query: 350 GTFSMNLNNSVTHCVAADNKGLKYEAAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLS 409
GTFSMNLNNSVTH VAAD+KG+KYEAAKR GDVIHYSWVL+CCSQKKLL L+PK++L LS
Sbjct: 683 GTFSMNLNNSVTHSVAADSKGIKYEAAKRHGDVIHYSWVLECCSQKKLLPLKPKHFLFLS 742
Query: 410 DSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNVDRSEDPKTIDYYKKKYCPQDKWSCFH 469
+SKKKL++E+DEF+D YFWDL+L+++KQLLSN+ SED K IDYY+ KYCP+ W F
Sbjct: 743 GNSKKKLEKEIDEFADSYFWDLELSELKQLLSNLSISEDVKAIDYYRGKYCPKQDWCMFV 802
Query: 470 GCCIYFYHSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNLANATHVVVLSVLGYDVN 529
GC IYF L DW +LL L++RRLK+E+SF GGKV ++ +ATH++V + G V
Sbjct: 803 GCQIYFLPLRLSLKSDWGILLELSIRRLKVEVSFRGGKVSDDPVSATHIIVFEIPGAPVR 862
Query: 530 FNSLTESFTAREKHLLWNKKLHVVRSQWLEDCLAKEQKSEEYEYSLKPTGMQESYLELCE 589
+ ++ +S EKH + K+H++ QWLEDCL Q+ +E Y+L P G + +E
Sbjct: 863 YETVLKSCNEAEKHAMLKDKIHIIAHQWLEDCLEMAQRLQEDSYNLNPNGKRS--IENIN 920
Query: 590 EDLDMEEPSSTLETSDKQNVS-SFPDGDGKQRGTRGVSPA------SPKREGKRKRGRPA 642
+D + P L D++N P + K +G + S +R +KRGRPA
Sbjct: 921 FGMDSDTP---LALEDQENPQIPCPSKEYKDQGRNEAASGQQMLSHSTERYDGKKRGRPA 977
Query: 643 GGSAKKRKSTVNLARRKRPHVRNKPSKIYQNESDESNASDETEKKEEIN-------REEN 695
S +K KS V RR R P+KI + ESD S+ +DE K E N E
Sbjct: 978 TRSMQKAKSDVEQVRRARTRKAKGPAKISEVESDISDHTDEKTKAETGNIGTLCTENSEK 1037
Query: 696 HEDREMDDE--------------------ENLETRQTNV-----------VEDLESLDRG 724
HE + +++E E + R+T + + +S D
Sbjct: 1038 HEFKTLENEISNSKKRGRPPAGNAQREKAEAGKIRRTRAHIAKGSANIGGINNSDSSDEA 1097
Query: 725 KALQQEVVKDFGKEKQTVRA-PDIEMRE--------RYHSKDSETTDKQQV--DAVQAML 773
A + + KD ++ + D ++ R SK E +K +V D ++AML
Sbjct: 1098 NAEESKRGKDENEKTNEFKMLEDCNAKQKGKAIEEVRADSKSVEKPEKLEVMKDPLEAML 1157
Query: 774 LDMIPSLGMKNEK-------TTNPIPKEESSSAEPSAEPTKKKKVSYKDIASKLLKDW 824
LDM+PSLGM K +++ + +E+ E +E KKKVSYKD+AS+LLKDW
Sbjct: 1158 LDMVPSLGMSGTKSSISSSSSSSTVVEEKKPFVENKSEAV-KKKVSYKDVASELLKDW 1214
>gi|449516627|ref|XP_004165348.1| PREDICTED: LOW QUALITY PROTEIN: DNA ligase 4-like, partial [Cucumis
sativus]
Length = 918
Score = 825 bits (2130), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/838 (54%), Positives = 570/838 (68%), Gaps = 69/838 (8%)
Query: 50 MAADQTGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPE 109
+ +D G P WS+ A+NVD+VE+FFK TIENRDEGIV+KDLGSKWEPGDRSGKWLKLKP+
Sbjct: 87 LNSDCAGYPSWSIRAYNVDDVERFFKSTIENRDEGIVIKDLGSKWEPGDRSGKWLKLKPD 146
Query: 110 YIRAGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEE 169
Y+RAGSDLD LIIGGYYGSGRRGGEVAQFL+ LAERP + YPRRF+SFCRVGTGL+DEE
Sbjct: 147 YVRAGSDLDALIIGGYYGSGRRGGEVAQFLMGLAERPPSNAYPRRFVSFCRVGTGLTDEE 206
Query: 170 LDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRS 229
LDAVV KLKPYFRK EYP++ PSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTI+S
Sbjct: 207 LDAVVNKLKPYFRKSEYPRKTAPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIKS 266
Query: 230 EVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQF 289
EVF+APYSLRFPRIDRVRYDKPWH+CLDVQSFVELVHSSNGTTQ+G G QD K K
Sbjct: 267 EVFAAPYSLRFPRIDRVRYDKPWHECLDVQSFVELVHSSNGTTQRGTNNSGRQDSKGKYI 326
Query: 290 RSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENG 349
+S KG KK+VS+VPSH LQTD++ I ++ IFS+M+FY VNVPP +SLDSLHK++VENG
Sbjct: 327 KSIGKGRKKSVSVVPSHLLQTDITGITEDSLIFSNMLFYIVNVPPTHSLDSLHKLIVENG 386
Query: 350 GTFSMNLNNSVTHCVAADNKGLKYEAAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLS 409
GTFSMNLNNSVTH VAAD+KG+KYEAAKR GDVIHYSWVL+CCSQKKLL L+PK++L LS
Sbjct: 387 GTFSMNLNNSVTHSVAADSKGIKYEAAKRHGDVIHYSWVLECCSQKKLLPLKPKHFLFLS 446
Query: 410 DSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNVDRSEDPKTIDYYKKKYCPQDKWSCFH 469
+SK KL++E+DEF+D YFWDL+L+++KQLLSN+ SED K IDYY+ KYCP+ W F
Sbjct: 447 GNSKXKLEKEIDEFADSYFWDLELSELKQLLSNLSISEDVKAIDYYRGKYCPKQDWCMFV 506
Query: 470 GCCIYFYHSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNLANATHVVVLSVLGYDVN 529
GC IYF L DW +LL L++RRLK+E+SF GGKV ++ +ATH++V + G V
Sbjct: 507 GCQIYFLPLRLSLKSDWGILLELSIRRLKVEVSFRGGKVSDDPVSATHIIVFEIPGAPVR 566
Query: 530 FNSLTESFTAREKHLLWNKKLHVVRSQWLEDCLAKEQKSEEYEYSLKPTGMQESYLELCE 589
+ ++ +S EKH + K+H++ QWLEDCL Q+ +E Y+L P G + +E
Sbjct: 567 YETVLKSCNEAEKHAMLKDKIHIIAHQWLEDCLEMAQRLQEDSYNLNPNGKRS--IENIN 624
Query: 590 EDLDMEEPSSTLETSDKQNVS-SFPDGDGKQRGTRGVSPA------SPKREGKRKRGRPA 642
+D + P L D++N P + K +G + S +R +KRGRPA
Sbjct: 625 FGMDSDTP---LALEDQENPQIPCPSKEYKDQGRNEAASGQQMLSHSTERYDGKKRGRPA 681
Query: 643 GGSAKKRKSTVNLARRKRPHVRNKPSKIYQNESDESNASDETEKKEEIN-------REEN 695
S +K KS V RR R P+KI + ESD S+ +DE K E N E
Sbjct: 682 TRSMQKAKSDVEQVRRARTRKAKGPAKISEVESDISDHTDEKTKAETGNIGTLCTENSEK 741
Query: 696 HEDREMDDE--------------------ENLETRQTNV-----------VEDLESLDRG 724
HE + +++E E + R+T + + +S D
Sbjct: 742 HEFKTLENEISNSKKRGRPPAGNAQREKAEAGKIRRTRAHIAKGSANIGGINNSDSSDEA 801
Query: 725 KALQQEVVKDFGKEKQTVRA-PDIEMRE--------RYHSKDSETTDKQQV--DAVQAML 773
A + + KD ++ + D ++ R SK E +K +V D ++AML
Sbjct: 802 NAEESKRGKDENEKTNEFKMLEDCNAKQKGKAIEEVRADSKSVEKPEKLEVMKDPLEAML 861
Query: 774 LDMIPSLGMKNEK-------TTNPIPKEESSSAEPSAEPTKKKKVSYKDIASKLLKDW 824
LDM+PSLGM K +++ + +E+ E +E KKKVSYKD+AS+LLKDW
Sbjct: 862 LDMVPSLGMSGTKSSISSSSSSSTVVEEKKPFVENKSEAV-KKKVSYKDVASELLKDW 918
>gi|30696835|ref|NP_568851.2| DNA ligase 4 [Arabidopsis thaliana]
gi|75174554|sp|Q9LL84.1|DNLI4_ARATH RecName: Full=DNA ligase 4; AltName: Full=DNA ligase IV; AltName:
Full=Polydeoxyribonucleotide synthase [ATP] 4
gi|9651815|gb|AAF91284.1|AF233527_1 DNA ligase IV [Arabidopsis thaliana]
gi|332009474|gb|AED96857.1| DNA ligase 4 [Arabidopsis thaliana]
Length = 1219
Score = 811 bits (2095), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/863 (51%), Positives = 573/863 (66%), Gaps = 126/863 (14%)
Query: 55 TGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAG 114
+GEP WS+V H +VE+FFKET+ENRDEGIVLKDL SKWEPGDRSGKW+KLKPEYIRAG
Sbjct: 390 SGEPSWSIVVHAAADVERFFKETVENRDEGIVLKDLESKWEPGDRSGKWMKLKPEYIRAG 449
Query: 115 SDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVV 174
+DLDVLIIGGYYGSGRRGGEVAQFLVALA+R + YPRRF+SFCRVGTGLSD+EL+ VV
Sbjct: 450 ADLDVLIIGGYYGSGRRGGEVAQFLVALADRAEANVYPRRFMSFCRVGTGLSDDELNTVV 509
Query: 175 TKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA 234
+KLKPYFRK E+PK+APPSFYQVTN+SKERPDVWI+SPEKSIILSITSDIRTIRSEVF A
Sbjct: 510 SKLKPYFRKNEHPKKAPPSFYQVTNHSKERPDVWIDSPEKSIILSITSDIRTIRSEVFVA 569
Query: 235 PYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRK 294
PYSLRFPRID+VRYDKPWH+CLDVQ+FVELV+SSNGTTQK KE QD+ PK +SS++
Sbjct: 570 PYSLRFPRIDKVRYDKPWHECLDVQAFVELVNSSNGTTQKQKESESTQDN-PKVNKSSKR 628
Query: 295 GEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSM 354
GEKKNVS+VPS F+QTDVSDIKG+TSIFS+M+FYFVNVP ++SL++ HKMVVENGG FSM
Sbjct: 629 GEKKNVSLVPSQFIQTDVSDIKGKTSIFSNMIFYFVNVPRSHSLETFHKMVVENGGKFSM 688
Query: 355 NLNNSVTHCVAADNKGLKYEAAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKK 414
NLNNSVTHC+AA++ G+KY+AAKR+ DVIH+SWVLDCCS+ K+L L PKY+LHL+D+S+
Sbjct: 689 NLNNSVTHCIAAESSGIKYQAAKRQRDVIHFSWVLDCCSRNKMLPLLPKYFLHLTDASRT 748
Query: 415 KLQEEVDEFSDLYFWDLDLADIKQLLSNVDRSEDPKTIDYYKKKYCPQDKWSCFHGCCIY 474
KLQ+++DEFSD Y+WDLDL +KQ+LSN +SED K+IDYYKKK CP+ +WSC CC+Y
Sbjct: 749 KLQDDIDEFSDSYYWDLDLEGLKQVLSNAKQSEDSKSIDYYKKKLCPEKRWSCLLSCCVY 808
Query: 475 FYHSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNLANATHVVVLSVLGYDVNFNSLT 534
FY ++ LS + E LLG+ +RL LE+ GGKV NNLA+A+H+VVL++ ++F ++
Sbjct: 809 FYPYSQTLSTEEEALLGIMAKRLMLEVLMAGGKVSNNLAHASHLVVLAMAEEPLDFTLVS 868
Query: 535 ESFTAREKHLLWNKKLHVVRSQWLEDCLAKEQKSEEYEYSLKPTGMQESYLELCEEDLDM 594
+SF+ EK LL K+LHVV S WLE+ L +E+K E Y+L+P M+ES D
Sbjct: 869 KSFSEMEKRLLLKKRLHVVSSHWLEESLQREEKLCEDVYTLRPKYMEES---------DT 919
Query: 595 EEPSSTLETSDKQNVSSFPDGDGKQRGTRGVSPASPKREGKRKRGRPAGGSAKKRKSTVN 654
EE + D V+S K+ PAS K RGR + K+ +S+ N
Sbjct: 920 EESDKS--EHDTTEVASQGSAQTKE-------PASSKIAITSSRGRSNTRAVKRGRSSTN 970
Query: 655 LARRKRPHVRNKPSKIYQNESDESNASDET------------------------------ 684
+R + +PSKI +E++ES+AS+E
Sbjct: 971 SLQRVQRRRGKQPSKISGDETEESDASEEKVSTRLSDIAEETDSFGEAQRNSSRGKCAKR 1030
Query: 685 -----------------EKKEEINREENHEDREMDDE-----------------ENLETR 710
+K +I +E+ E+ E+D EN ETR
Sbjct: 1031 GKSRVGQTQRVQRSRRGKKAAKIGGDESDENDELDGNNNVSADAEEGNAAGRSVENEETR 1090
Query: 711 QTNVVEDLESLDRGKALQ-QEVVKDFGKEKQTVRAPDIEMRERYHSKDSETTDKQQVDAV 769
+ ++ + ES R + +E ++D K +++M+E+ + D +
Sbjct: 1091 EPDIAKYTESQQRDNTVAVEEALQDSRNAK-----TEMDMKEKLQIHE---------DPL 1136
Query: 770 QAMLLDMIPSLGMKNEKTTNPIPKE----------------------ESSSAEPSAEP-- 805
QAML+ M P K +T+N E +++S AE
Sbjct: 1137 QAMLMKMFPIPSQKTTETSNRTTGEYRKANVSGECESSEKRKLDAETDNTSVNAGAESDV 1196
Query: 806 ----TKKKKVSYKDIASKLLKDW 824
KKKKVSY+D+A +LLKDW
Sbjct: 1197 VPPLVKKKKVSYRDVAGELLKDW 1219
>gi|8843818|dbj|BAA97366.1| unnamed protein product [Arabidopsis thaliana]
Length = 1184
Score = 771 bits (1992), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/863 (50%), Positives = 559/863 (64%), Gaps = 139/863 (16%)
Query: 55 TGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAG 114
+GEP WS+V H +VE+FFKET+ENRDEGIVLKDL SKWEPGDRSGKW+KLKPEYIRAG
Sbjct: 368 SGEPSWSIVVHAAADVERFFKETVENRDEGIVLKDLESKWEPGDRSGKWMKLKPEYIRAG 427
Query: 115 SDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVV 174
+DLDVLIIGGYYGSGRRGGEVAQFLVALA+R + YPRRF+SFCRVGTGLSD+EL+ VV
Sbjct: 428 ADLDVLIIGGYYGSGRRGGEVAQFLVALADRAEANVYPRRFMSFCRVGTGLSDDELNTVV 487
Query: 175 TKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA 234
+KLKPYFRK E+PK+APPSFYQVTN+SKERPDVWI+SPEKSIILSITSDIRTIRSEVF A
Sbjct: 488 SKLKPYFRKNEHPKKAPPSFYQVTNHSKERPDVWIDSPEKSIILSITSDIRTIRSEVFVA 547
Query: 235 PYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRK 294
PYSLRFPRID+VRYDKPWH+CLDVQ+FVELV+SSNGTTQK KE QD+ PK +SS++
Sbjct: 548 PYSLRFPRIDKVRYDKPWHECLDVQAFVELVNSSNGTTQKQKESESTQDN-PKVNKSSKR 606
Query: 295 GEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSM 354
GEKKNVS+VPS F+QTDVSDIK FVNVP ++SL++ HKMVVENGG FSM
Sbjct: 607 GEKKNVSLVPSQFIQTDVSDIKD-----------FVNVPRSHSLETFHKMVVENGGKFSM 655
Query: 355 NLNNSVTHCVAADNKGLKYEAAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKK 414
NLNNSVTHC+AA++ G+KY+AAKR+ DVIH+SWVLDCCS+ K+L L PKY+LHL+D+S+
Sbjct: 656 NLNNSVTHCIAAESSGIKYQAAKRQRDVIHFSWVLDCCSRNKMLPLLPKYFLHLTDASRT 715
Query: 415 KLQEEVDEFSDLYFWDLDLADIKQLLSNVDRSEDPKTIDYYKKKYCPQDKWSCFHGCCIY 474
KLQ+++DEFSD Y+WDLDL +KQ+LSN +SED K+IDYYKKK CP+ +WSC CC+Y
Sbjct: 716 KLQDDIDEFSDSYYWDLDLEGLKQVLSNAKQSEDSKSIDYYKKKLCPEKRWSCLLSCCVY 775
Query: 475 FYHSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNLANATHVVVLSVLGYDVNFNSLT 534
FY ++ LS + E LLG+ +RL LE+ GGKV NNLA+A+H+VVL++ ++F ++
Sbjct: 776 FYPYSQTLSTEEEALLGIMAKRLMLEVLMAGGKVSNNLAHASHLVVLAMAEEPLDFTLVS 835
Query: 535 ESFTAREKHLLWNKKLHVVRSQWLEDCLAKEQKSEEYEYSLKPTGMQESYLELCEEDLDM 594
+S EK LL K+LHVV S WLE+ L +E+K E Y+L+P M+ES D
Sbjct: 836 KS--EMEKRLLLKKRLHVVSSHWLEESLQREEKLCEDVYTLRPKYMEES---------DT 884
Query: 595 EEPSSTLETSDKQNVSSFPDGDGKQRGTRGVSPASPKREGKRKRGRPAGGSAKKRKSTVN 654
EE + D V+S K+ PAS K RGR + K+ +S+ N
Sbjct: 885 EESDKS--EHDTTEVASQGSAQTKE-------PASSKIAITSSRGRSNTRAVKRGRSSTN 935
Query: 655 LARRKRPHVRNKPSKIYQNESDESNASDET------------------------------ 684
+R + +PSKI +E++ES+AS+E
Sbjct: 936 SLQRVQRRRGKQPSKISGDETEESDASEEKVSTRLSDIAEETDSFGEAQRNSSRGKCAKR 995
Query: 685 -----------------EKKEEINREENHEDREMDDE-----------------ENLETR 710
+K +I +E+ E+ E+D EN ETR
Sbjct: 996 GKSRVGQTQRVQRSRRGKKAAKIGGDESDENDELDGNNNVSADAEEGNAAGRSVENEETR 1055
Query: 711 QTNVVEDLESLDRGKALQ-QEVVKDFGKEKQTVRAPDIEMRERYHSKDSETTDKQQVDAV 769
+ ++ + ES R + +E ++D K +++M+E+ + D +
Sbjct: 1056 EPDIAKYTESQQRDNTVAVEEALQDSRNAK-----TEMDMKEKLQIHE---------DPL 1101
Query: 770 QAMLLDMIPSLGMKNEKTTNPIPKE----------------------ESSSAEPSAEP-- 805
QAML+ M P K +T+N E +++S AE
Sbjct: 1102 QAMLMKMFPIPSQKTTETSNRTTGEYRKANVSGECESSEKRKLDAETDNTSVNAGAESDV 1161
Query: 806 ----TKKKKVSYKDIASKLLKDW 824
KKKKVSY+D+A +LLKDW
Sbjct: 1162 VPPLVKKKKVSYRDVAGELLKDW 1184
>gi|255573570|ref|XP_002527709.1| DNA ligase IV, putative [Ricinus communis]
gi|223532899|gb|EEF34668.1| DNA ligase IV, putative [Ricinus communis]
Length = 850
Score = 717 bits (1851), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/484 (74%), Positives = 421/484 (86%), Gaps = 2/484 (0%)
Query: 56 GEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS 115
GEP SL+ +NV++V++FF+ET++NRDEGI+LKDL SKWEP DRSGKWLKLKPEYI+A S
Sbjct: 366 GEPPCSLITYNVNDVKRFFEETVKNRDEGIILKDLASKWEPSDRSGKWLKLKPEYIQAAS 425
Query: 116 DLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVT 175
DLDVLIIGGYYGSGRRGGEVAQFLV LAERPAPDTYPRRFISFCRVGTGL+D+EL AVV
Sbjct: 426 DLDVLIIGGYYGSGRRGGEVAQFLVGLAERPAPDTYPRRFISFCRVGTGLTDDELAAVVN 485
Query: 176 KLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP 235
KLKPYFRKYEYPK APP+FYQVTNNSKERPDVWIESPEKSIILSITSDIRTI SEVF+AP
Sbjct: 486 KLKPYFRKYEYPKMAPPNFYQVTNNSKERPDVWIESPEKSIILSITSDIRTISSEVFAAP 545
Query: 236 YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKG 295
YSLRFPRIDRVRYDKPWH+CLDVQSFVELVHSSNGTTQ GK+ GLQD+KP +SS+KG
Sbjct: 546 YSLRFPRIDRVRYDKPWHECLDVQSFVELVHSSNGTTQNGKDNKGLQDNKPTSVKSSKKG 605
Query: 296 EKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMN 355
+KN S VPSHF++TDVS +K E+ IFS M+FYFVNVPP +SL+SLHKMV ENGG+FSMN
Sbjct: 606 GRKNASAVPSHFIETDVSGVKEESFIFSKMMFYFVNVPPTHSLESLHKMVAENGGSFSMN 665
Query: 356 LNNSVTHCVAADNKGLKYEAAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKK 415
LN SVTHC+AA++KG+KY+A K GD+IH SWVLDCCSQK+LL LQPKY+L L+DSSKKK
Sbjct: 666 LNKSVTHCIAAESKGIKYQATKLHGDIIHCSWVLDCCSQKRLLPLQPKYFLFLADSSKKK 725
Query: 416 LQEEVDEFSDLYFWDLDLADIKQLLSNVDRSEDPKTIDYYKKKYCPQDKWSCFHGCCIYF 475
LQEE+DEFSD Y+WD+DLAD+KQLL +++ S + +IDY K+KY +DKWS FHGC +YF
Sbjct: 726 LQEEIDEFSDSYYWDVDLADMKQLLDSINTSGNFSSIDYLKRKYGAKDKWSQFHGCSVYF 785
Query: 476 YHSTEPL--SPDWEVLLGLALRRLKLEISFHGGKVCNNLANATHVVVLSVLGYDVNFNSL 533
Y ST + DW+ LLGL LRRLKLE+ GG+V +NLANATH+V L+V G V+F+SL
Sbjct: 786 YVSTASFLRTCDWQSLLGLKLRRLKLEVIMGGGQVTDNLANATHLVALNVPGSSVDFDSL 845
Query: 534 TESF 537
+ +
Sbjct: 846 MKRY 849
>gi|116309733|emb|CAH66777.1| OSIGBa0113I13.3 [Oryza sativa Indica Group]
Length = 1281
Score = 704 bits (1818), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/649 (55%), Positives = 490/649 (75%), Gaps = 29/649 (4%)
Query: 57 EPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD 116
EPCWS++AH++D+VEKFFK+T++NR+EGI+LKDL SKWEPGDRSGKWLKLKP+YI AG+D
Sbjct: 377 EPCWSILAHSLDDVEKFFKDTVDNREEGIILKDLESKWEPGDRSGKWLKLKPDYIHAGAD 436
Query: 117 LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTK 176
LDV+IIGGYYGSGRRGGEVAQFLV LA ++YP+RF+SFCRVGTGLSDEELDA+VTK
Sbjct: 437 LDVIIIGGYYGSGRRGGEVAQFLVGLAVPSDDNSYPKRFLSFCRVGTGLSDEELDALVTK 496
Query: 177 LKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPY 236
LKP+FRK EYPK+ PP FY+VTN+SKERPDVWIESP+KS+I+SITSDIRTI+SEVF+APY
Sbjct: 497 LKPHFRKNEYPKK-PPRFYEVTNHSKERPDVWIESPDKSVIISITSDIRTIKSEVFAAPY 555
Query: 237 SLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGG-LQDDKPKQFRSSRKG 295
SLRFPRI R+RYDKPWH+CLDVQ+FV++VHSSNGTT + + L++ K KQ R+++KG
Sbjct: 556 SLRFPRIQRLRYDKPWHECLDVQAFVDIVHSSNGTTHRAADDDNDLKNVKVKQLRTNKKG 615
Query: 296 EKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMN 355
EKKNVSI+PSH ++TD+S +KGET IF++ +FYFVN+PP+Y+LD HK+VVENGG+FSMN
Sbjct: 616 EKKNVSIIPSHLMKTDISGLKGETLIFANTMFYFVNIPPSYNLDYFHKLVVENGGSFSMN 675
Query: 356 LNNSVTHCVAADNKGLKYEAAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKK 415
LN+SVTHC+AA+ KG+KY+AA R+G +IHYSW+LDCC +K+LL LQPKY L L+D ++ K
Sbjct: 676 LNDSVTHCIAAEKKGIKYQAATRQGRIIHYSWILDCCKEKRLLHLQPKYILFLADFARHK 735
Query: 416 LQEEVDEFSDLYFWDLDLADIKQLLSNVDRS-EDPKTIDYYKKKYCPQDKWSCFHGCCIY 474
EE+D ++D ++WD+D++D+KQ+ SN+DR+ D + +YKKKYC +++ F GCC+Y
Sbjct: 736 FPEEIDSYADYFYWDIDISDLKQIFSNMDRAVVDSNMVHHYKKKYCADERFCFFQGCCVY 795
Query: 475 FYHSTEPL-SPDWEVLLGLALRRLKLEISFHGGKVCNNLANATHVVVLSVLGYDVNFNSL 533
FYH+ PL + D+ V+ LAL+R+K +++ HGG+VC+ LA ATH++++SVL NF+ L
Sbjct: 796 FYHA--PLVNADYNVISDLALKRVKQDLTMHGGQVCSILAPATHLIIVSVLQA-YNFDML 852
Query: 534 TESFTAREKHLLWNKKLHVVRSQWLEDCLAKEQKSEEYEYSLKPTGMQESYLELCEEDLD 593
+S E+ L +K+L VV ++WLED + K+ + E YSLKP ++E +E EE +
Sbjct: 853 YKSLPPAERRYLHDKRLQVVSNKWLEDSVEKQTRLPETTYSLKPDTLEEIEIERSEETV- 911
Query: 594 MEEPSSTLETSDKQNVSSFPDGDGKQRGTRGVSPASPKREGKRKRGRPAGGSAKKRKSTV 653
+ + LE ++K + S + RKRGRP+ +++ K
Sbjct: 912 -QPCNDKLEENEKADTSHV-------------------KHAPRKRGRPSSSASRTAKPAP 951
Query: 654 NLARRKRPHVRNKPSKIYQNESDESNASDETEKKEEINREENHEDREMD 702
RR R N+ +KI E +ES+ ET ++I +N E+D
Sbjct: 952 RPVRRTRARRGNQHAKIDDVEPEESDHG-ETGLDDQIPDTDNISKMEVD 999
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 50/122 (40%), Gaps = 47/122 (38%)
Query: 750 RERYHSKDSETTDK--QQVDAVQAMLLDMIPSLGMKNEKTTN------------------ 789
R+ + S T +K Q VD + AMLLDMIPSLG N
Sbjct: 1160 RDTAETTSSATCEKMEQMVDPLHAMLLDMIPSLGQMKTDVGNRVAEAKAETNPPWVGSST 1219
Query: 790 -----PIPKEE------------------SSSAEPSAEPT----KKKKVSYKDIASKLLK 822
P+P+ S+ P+ +PT KKKKVSYKD+A LLK
Sbjct: 1220 SSYVAPVPQASASSASSSGVPAPHAGSSTQSTGVPAPDPTAGAPKKKKVSYKDVAGALLK 1279
Query: 823 DW 824
DW
Sbjct: 1280 DW 1281
>gi|218195520|gb|EEC77947.1| hypothetical protein OsI_17298 [Oryza sativa Indica Group]
Length = 1322
Score = 704 bits (1818), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/649 (55%), Positives = 490/649 (75%), Gaps = 29/649 (4%)
Query: 57 EPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD 116
EPCWS++AH++D+VEKFFK+T++NR+EGI+LKDL SKWEPGDRSGKWLKLKP+YI AG+D
Sbjct: 418 EPCWSILAHSLDDVEKFFKDTVDNREEGIILKDLESKWEPGDRSGKWLKLKPDYIHAGAD 477
Query: 117 LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTK 176
LDV+IIGGYYGSGRRGGEVAQFLV LA ++YP+RF+SFCRVGTGLSDEELDA+VTK
Sbjct: 478 LDVIIIGGYYGSGRRGGEVAQFLVGLAVPSDDNSYPKRFLSFCRVGTGLSDEELDALVTK 537
Query: 177 LKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPY 236
LKP+FRK EYPK+ PP FY+VTN+SKERPDVWIESP+KS+I+SITSDIRTI+SEVF+APY
Sbjct: 538 LKPHFRKNEYPKK-PPRFYEVTNHSKERPDVWIESPDKSVIISITSDIRTIKSEVFAAPY 596
Query: 237 SLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGG-LQDDKPKQFRSSRKG 295
SLRFPRI R+RYDKPWH+CLDVQ+FV++VHSSNGTT + + L++ K KQ R+++KG
Sbjct: 597 SLRFPRIQRLRYDKPWHECLDVQAFVDIVHSSNGTTHRAADDDNDLKNVKVKQLRTNKKG 656
Query: 296 EKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMN 355
EKKNVSI+PSH ++TD+S +KGET IF++ +FYFVN+PP+Y+LD HK+VVENGG+FSMN
Sbjct: 657 EKKNVSIIPSHLMKTDISGLKGETLIFANTMFYFVNIPPSYNLDYFHKLVVENGGSFSMN 716
Query: 356 LNNSVTHCVAADNKGLKYEAAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKK 415
LN+SVTHC+AA+ KG+KY+AA R+G +IHYSW+LDCC +K+LL LQPKY L L+D ++ K
Sbjct: 717 LNDSVTHCIAAEKKGIKYQAATRQGRIIHYSWILDCCKEKRLLHLQPKYILFLADFARHK 776
Query: 416 LQEEVDEFSDLYFWDLDLADIKQLLSNVDRS-EDPKTIDYYKKKYCPQDKWSCFHGCCIY 474
EE+D ++D ++WD+D++D+KQ+ SN+DR+ D + +YKKKYC +++ F GCC+Y
Sbjct: 777 FPEEIDSYADYFYWDIDISDLKQIFSNMDRAVVDSNMVHHYKKKYCADERFCFFQGCCVY 836
Query: 475 FYHSTEPL-SPDWEVLLGLALRRLKLEISFHGGKVCNNLANATHVVVLSVLGYDVNFNSL 533
FYH+ PL + D+ V+ LAL+R+K +++ HGG+VC+ LA ATH++++SVL NF+ L
Sbjct: 837 FYHA--PLVNADYNVISDLALKRVKQDLTMHGGQVCSILAPATHLIIVSVLQA-YNFDML 893
Query: 534 TESFTAREKHLLWNKKLHVVRSQWLEDCLAKEQKSEEYEYSLKPTGMQESYLELCEEDLD 593
+S E+ L +K+L VV ++WLED + K+ + E YSLKP ++E +E EE +
Sbjct: 894 YKSLPPAERRYLHDKRLQVVSNKWLEDSVEKQTRLPETTYSLKPDTLEEIEIERSEETV- 952
Query: 594 MEEPSSTLETSDKQNVSSFPDGDGKQRGTRGVSPASPKREGKRKRGRPAGGSAKKRKSTV 653
+ + LE ++K + S + RKRGRP+ +++ K
Sbjct: 953 -QPCNDKLEENEKADTSHV-------------------KHAPRKRGRPSSSASRTAKPAP 992
Query: 654 NLARRKRPHVRNKPSKIYQNESDESNASDETEKKEEINREENHEDREMD 702
RR R N+ +KI E +ES+ ET ++I +N E+D
Sbjct: 993 RPVRRTRARRGNQHAKIDDVEPEESDHG-ETGLDDQIPDTDNISKMEVD 1040
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 50/122 (40%), Gaps = 47/122 (38%)
Query: 750 RERYHSKDSETTDK--QQVDAVQAMLLDMIPSLGMKNEKTTN------------------ 789
R+ + S T +K Q VD + AMLLDMIPSLG N
Sbjct: 1201 RDTAETTSSATCEKMEQMVDPLHAMLLDMIPSLGQMKTDVGNRVAEAKAETNPPWVGSST 1260
Query: 790 -----PIPK------------------EESSSAEPSAEPT----KKKKVSYKDIASKLLK 822
P+P+ S+ P+ +PT KKKKVSYKD+A LLK
Sbjct: 1261 SSYVAPVPQASASSASSSGVPAPHAGSSTQSTGVPAPDPTAGAPKKKKVSYKDVAGALLK 1320
Query: 823 DW 824
DW
Sbjct: 1321 DW 1322
>gi|222629503|gb|EEE61635.1| hypothetical protein OsJ_16077 [Oryza sativa Japonica Group]
Length = 1322
Score = 703 bits (1814), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/649 (55%), Positives = 490/649 (75%), Gaps = 29/649 (4%)
Query: 57 EPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD 116
EPCWS++AH++D+VEKFFK+T++NR+EGI+LKDL SKWEPGDRSGKWLKLKP+YI AG+D
Sbjct: 418 EPCWSILAHSLDDVEKFFKDTVDNREEGIILKDLESKWEPGDRSGKWLKLKPDYIHAGAD 477
Query: 117 LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTK 176
LDV+IIGGYYGSGRRGGEVAQFLV LA ++YP+RF+SFCRVGTGLSDEELDA+VTK
Sbjct: 478 LDVIIIGGYYGSGRRGGEVAQFLVGLAVPSDDNSYPKRFLSFCRVGTGLSDEELDALVTK 537
Query: 177 LKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPY 236
LKP+FRK EYPK+ PP FY+VTN+SKERPDVWIESP+KS+I+SITSDIRTI+SEVF+APY
Sbjct: 538 LKPHFRKNEYPKK-PPRFYEVTNHSKERPDVWIESPDKSVIISITSDIRTIKSEVFAAPY 596
Query: 237 SLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGG-LQDDKPKQFRSSRKG 295
SLRFPRI R+RYDKPWH+CLDVQ+FV++VHSSNGTT + + L++ K KQ R+++KG
Sbjct: 597 SLRFPRIQRLRYDKPWHECLDVQAFVDIVHSSNGTTHRAADDDNDLKNVKVKQPRTNKKG 656
Query: 296 EKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMN 355
EKKNVSI+PSH ++TD+S +KGET IF++ +FYFVN+PP+Y+LD HK+VVENGG+FSMN
Sbjct: 657 EKKNVSIIPSHLMKTDISGLKGETLIFANTMFYFVNIPPSYNLDYFHKLVVENGGSFSMN 716
Query: 356 LNNSVTHCVAADNKGLKYEAAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKK 415
LN+SVTHC+AA+ KG+KY+AA R+G +IHYSW+LDCC +K+LL LQPKY L L+D ++ K
Sbjct: 717 LNDSVTHCIAAEKKGIKYQAATRQGRIIHYSWILDCCKEKRLLHLQPKYILFLADFARHK 776
Query: 416 LQEEVDEFSDLYFWDLDLADIKQLLSNVDRS-EDPKTIDYYKKKYCPQDKWSCFHGCCIY 474
EE+D ++D ++WD+D++D+KQ+ SN+DR+ D + +YKKKYC +++ F GCC+Y
Sbjct: 777 FPEEIDSYADYFYWDIDISDLKQIFSNMDRAVVDSNMVHHYKKKYCADERFCFFQGCCVY 836
Query: 475 FYHSTEPL-SPDWEVLLGLALRRLKLEISFHGGKVCNNLANATHVVVLSVLGYDVNFNSL 533
FYH+ PL + D+ V+ LAL+R+K +++ HGG+VC+ LA ATH++++SVL NF+ L
Sbjct: 837 FYHA--PLVNADYNVISDLALKRVKQDLTMHGGQVCSILAPATHLIIVSVLQA-YNFDML 893
Query: 534 TESFTAREKHLLWNKKLHVVRSQWLEDCLAKEQKSEEYEYSLKPTGMQESYLELCEEDLD 593
+S E+ L +K+L VV ++WLED + K+ + E YSLKP ++E +E EE +
Sbjct: 894 YKSLPPAERRYLHDKRLQVVSNKWLEDSVEKQTRLPETTYSLKPDTLEEIEIERSEETV- 952
Query: 594 MEEPSSTLETSDKQNVSSFPDGDGKQRGTRGVSPASPKREGKRKRGRPAGGSAKKRKSTV 653
+ + LE ++K + S + RKRGRP+ +++ K
Sbjct: 953 -QPCNDKLEENEKADTSHV-------------------KHAPRKRGRPSSSASRTAKPAP 992
Query: 654 NLARRKRPHVRNKPSKIYQNESDESNASDETEKKEEINREENHEDREMD 702
RR R N+ +KI E +ES+ ET ++I +N E+D
Sbjct: 993 RPVRRTRARRGNQHAKIDDVEPEESDHG-ETGLDDQIPDTDNISKMEVD 1040
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 50/122 (40%), Gaps = 47/122 (38%)
Query: 750 RERYHSKDSETTDK--QQVDAVQAMLLDMIPSLGMKNEKTTN------------------ 789
R+ + S T +K Q VD + AMLLDMIPSLG N
Sbjct: 1201 RDTAETTSSATCEKMEQMVDPLHAMLLDMIPSLGQMKTDVGNRVAEAKAETNPPWVGSST 1260
Query: 790 -----PIPK------------------EESSSAEPSAEPT----KKKKVSYKDIASKLLK 822
P+P+ S+ P+ +PT KKKKVSYKD+A LLK
Sbjct: 1261 SSYVAPVPQASASSASSSGVPAPHAGSSTQSTGVPAPDPTAGAPKKKKVSYKDVAGALLK 1320
Query: 823 DW 824
DW
Sbjct: 1321 DW 1322
>gi|242077098|ref|XP_002448485.1| hypothetical protein SORBIDRAFT_06g027820 [Sorghum bicolor]
gi|241939668|gb|EES12813.1| hypothetical protein SORBIDRAFT_06g027820 [Sorghum bicolor]
Length = 1164
Score = 632 bits (1629), Expect = e-178, Method: Compositional matrix adjust.
Identities = 307/523 (58%), Positives = 407/523 (77%), Gaps = 36/523 (6%)
Query: 57 EPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD 116
EPCWS++AHNV++VE+FFKETIENRDEGI+LKDL SKWEPGDR+GKWLKLKP+YI AG+D
Sbjct: 370 EPCWSIIAHNVEDVERFFKETIENRDEGIILKDLDSKWEPGDRNGKWLKLKPDYIHAGAD 429
Query: 117 LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTK 176
LDV+IIGGYYGSGRRG EVAQFLV LA ++YP+RF+SFCRVGTGLSDEE DA+VTK
Sbjct: 430 LDVIIIGGYYGSGRRGREVAQFLVGLAVPSDDNSYPKRFLSFCRVGTGLSDEERDALVTK 489
Query: 177 LKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPY 236
LKPYFRK EYPK+ PP FY+VTNNSKERPDVWIESP+KS+I+S+TSDIRTI+SEVF++PY
Sbjct: 490 LKPYFRKNEYPKK-PPKFYEVTNNSKERPDVWIESPDKSVIISVTSDIRTIKSEVFASPY 548
Query: 237 SLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGE 296
LRFPRI RVRYDKPWH+CLDVQ+FV++VHSSNGTTQ+ + L++D + R+++K E
Sbjct: 549 CLRFPRIQRVRYDKPWHECLDVQAFVDIVHSSNGTTQRVADDNSLKNDDTNRSRTNKKVE 608
Query: 297 KKN-VSIVPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMN 355
KK VS++PSH ++TDVS VVENGG+FSMN
Sbjct: 609 KKKCVSVIPSHLMKTDVS-------------------------------VVENGGSFSMN 637
Query: 356 LNNSVTHCVAADNKGLKYEAAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKK 415
LN+SVTHC+AA+ KG+KY+AA R+G +IHY W+LDCC +K LL+LQP+Y L L+D ++ K
Sbjct: 638 LNDSVTHCIAAEKKGIKYQAALRQGRIIHYEWILDCCKEKHLLRLQPRYILFLADFARHK 697
Query: 416 LQEEVDEFSDLYFWDLDLADIKQLLSNVDR-SEDPKTIDYYKKKYCPQDKWSCFHGCCIY 474
EE+D ++D Y+WD+++AD+KQ+ SN+D+ + D ++ YKKK+C +++ F GCC+Y
Sbjct: 698 FPEEIDSYADYYYWDIEIADLKQIFSNIDKVAGDSNMVNQYKKKHCIDERFCFFQGCCVY 757
Query: 475 FYHSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNLANATHVVVLSVLGYDVNFNSLT 534
H+ ++ D+ V+ LAL+R+K +++ HGG+VC+++A ATH+VV+SVL NF++L
Sbjct: 758 L-HNAPLVNADYNVISDLALKRVKQDLTMHGGQVCSSIAPATHLVVVSVLQA-YNFDNLY 815
Query: 535 ESFTAREKHLLWNKKLHVVRSQWLEDCLAKEQKSEEYEYSLKP 577
+SF E+ L +K+LHVV ++WLED + K+ K E YSLKP
Sbjct: 816 KSFPPAERRYLHDKRLHVVSNKWLEDSVEKQMKLSETAYSLKP 858
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 48/89 (53%), Gaps = 27/89 (30%)
Query: 763 KQQVDAVQAMLLDMIPSLGMKN--EKTTNPIPKEE---------SSSAE---PSAEPT-- 806
+Q D + AMLLDM+P LG K + + P+PK E +S++E P A +
Sbjct: 1076 EQMADPLHAMLLDMLPLLGKKGTEDASRAPLPKAEKDPPAGGSSTSNSEILAPDAGTSGV 1135
Query: 807 -----------KKKKVSYKDIASKLLKDW 824
KKKKVSYKD+AS+LLKDW
Sbjct: 1136 PAPDPNAAPPPKKKKVSYKDVASELLKDW 1164
>gi|302803492|ref|XP_002983499.1| hypothetical protein SELMODRAFT_422836 [Selaginella moellendorffii]
gi|300148742|gb|EFJ15400.1| hypothetical protein SELMODRAFT_422836 [Selaginella moellendorffii]
Length = 1172
Score = 466 bits (1200), Expect = e-128, Method: Compositional matrix adjust.
Identities = 258/539 (47%), Positives = 354/539 (65%), Gaps = 25/539 (4%)
Query: 46 RSQIMAADQ--TGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKW 103
R +++ D+ G WS+ + +VEKFF T++NR+EGIV+KD SKWEPGDRSGKW
Sbjct: 374 RLELLQPDRRNCGGQLWSITPQSAADVEKFFLMTVDNREEGIVVKDFDSKWEPGDRSGKW 433
Query: 104 LKLKPEYIRAGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGT 163
+KLKP+Y++ S++DVLIIGGYYGSGRRGG+VAQFL+ +AERPA YP +F SFC+VGT
Sbjct: 434 MKLKPDYVKE-SEMDVLIIGGYYGSGRRGGDVAQFLLGIAERPA-SGYPTKFHSFCKVGT 491
Query: 164 GLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSD 223
GLSDEE +V KL+PYFRKY+ + PPS+Y VTNN+KERPDVWIE P+KS++L + SD
Sbjct: 492 GLSDEECRVLVDKLRPYFRKYDKNTK-PPSYYVVTNNAKERPDVWIEQPDKSVLLEVKSD 550
Query: 224 IRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQD 283
IR I+SEVF++PYSLRFPR+ RVRYDKPW++CLD+Q V +V G G GG
Sbjct: 551 IRKIKSEVFASPYSLRFPRVTRVRYDKPWNECLDIQELVRMVAEDAGAGVNGDGDGG--- 607
Query: 284 DKPKQFRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDS--- 340
K KQ R+ +K K + P H QTDVS +K + + S +VF+ VN + L+
Sbjct: 608 RKKKQERAPKKKAPKLPLLAP-HMQQTDVSGVKKVSDMLSGLVFFLVN----FKLEEKER 662
Query: 341 LHKMVVENGGTFSMNLNNSVTHCVAADNKGLKYEAAKRRGDVIHYSWVLDCCSQKKLLQL 400
HK+V E GG FSMNLN VTH +A KGL YE A +RGDVIH SW +D + K+LL L
Sbjct: 663 FHKLVAEYGGKFSMNLNGDVTHVLAESPKGLLYETATKRGDVIHSSWFMDSIAAKELLPL 722
Query: 401 QPKYYLHLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNV---DRSEDPKTIDYYKK 457
+PKY LHLS +++ L++ +DEF D YF ++D AD+KQL + D S + K +D ++
Sbjct: 723 RPKYMLHLSYKTRETLKDTLDEFGDHYFVEVDEADMKQLFGRMRVEDLSVNEKDVDEHRG 782
Query: 458 KYCPQDKWSCFHGCCIYFYHSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNLANATH 517
D+ + F GC YFY+ E D ++ G+ LRRL++E+ G V +LA ATH
Sbjct: 783 SL--GDRKNIFEGCSFYFYYPREAAVADEAMIAGVVLRRLEVEVELRKGAVKPSLAGATH 840
Query: 518 VVVLSVLGYDVNFNSLTESFTAREKHLLWNKKLHVVRSQWLEDCLAKEQKSEEYEYSLK 576
++V +D + + E L+ +KKL V+ +WLE+ L ++ E +Y ++
Sbjct: 841 MIVF----WDSERDHSEAGLSFSENKLVSSKKLRVLSHRWLEEALRRDSVPPEDDYDVR 895
>gi|302784448|ref|XP_002973996.1| hypothetical protein SELMODRAFT_414166 [Selaginella moellendorffii]
gi|300158328|gb|EFJ24951.1| hypothetical protein SELMODRAFT_414166 [Selaginella moellendorffii]
Length = 1171
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 258/539 (47%), Positives = 354/539 (65%), Gaps = 25/539 (4%)
Query: 46 RSQIMAADQ--TGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKW 103
R +++ D+ G WS+ + +VEKFF T++NR+EGIV+KD SKWEPGDRSGKW
Sbjct: 374 RFELLQPDRRNCGGQLWSITPQSAADVEKFFLMTVDNREEGIVVKDFDSKWEPGDRSGKW 433
Query: 104 LKLKPEYIRAGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGT 163
+KLKP+Y++ S++DVLIIGGYYGSGRRGG+VAQFL+ +AERPA YP +F SFC+VGT
Sbjct: 434 MKLKPDYVKE-SEMDVLIIGGYYGSGRRGGDVAQFLLGIAERPA-SGYPTKFHSFCKVGT 491
Query: 164 GLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSD 223
GLSDEE +V KL+PYFRKY+ + PPS+Y VTNN+KERPDVWIE P+KS++L + SD
Sbjct: 492 GLSDEECRVLVDKLRPYFRKYDKNTK-PPSYYVVTNNAKERPDVWIEQPDKSVLLEVKSD 550
Query: 224 IRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQD 283
IR I+SEVF++PYSLRFPR+ RVRYDKPW++CLD+Q V +V G G GG
Sbjct: 551 IRKIKSEVFASPYSLRFPRVTRVRYDKPWNECLDIQELVRMVAEDTGAGVNGDGDGG--- 607
Query: 284 DKPKQFRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDS--- 340
K KQ RS +K K + P H QTDVS +K + + S +VF+ VN + L+
Sbjct: 608 RKKKQERSPKKKAPKLPLLAP-HMQQTDVSGVKKVSDMLSGLVFFLVN----FKLEDKER 662
Query: 341 LHKMVVENGGTFSMNLNNSVTHCVAADNKGLKYEAAKRRGDVIHYSWVLDCCSQKKLLQL 400
HK+V E GG FSMNLN VTH +A KGL YE A +RGDVIH SW +D + K+LL L
Sbjct: 663 FHKLVAEYGGKFSMNLNGDVTHVLAESPKGLLYETATKRGDVIHSSWFMDSIAAKELLPL 722
Query: 401 QPKYYLHLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNV---DRSEDPKTIDYYKK 457
+PKY LHLS +++ L++ +DEF D YF ++D AD+KQL + + S + K +D ++
Sbjct: 723 RPKYMLHLSYKTRETLKDTLDEFGDHYFVEVDEADMKQLFGRMRVEELSVNDKDVDEHRG 782
Query: 458 KYCPQDKWSCFHGCCIYFYHSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNLANATH 517
D+ + F GC YFY+ E D ++ G+ LRRL++E+ G V +LA ATH
Sbjct: 783 SL--GDRKNIFEGCSFYFYYPREAAVADEAMIAGVVLRRLEVEVELRKGAVKPSLARATH 840
Query: 518 VVVLSVLGYDVNFNSLTESFTAREKHLLWNKKLHVVRSQWLEDCLAKEQKSEEYEYSLK 576
++V +D + + E L+ +KKL V+ +WLE+ L ++ E +Y ++
Sbjct: 841 MIVF----WDSERDHSEAGLSFSENKLVSSKKLRVLSHRWLEEALRRDSVPPEDDYDVR 895
>gi|357168383|ref|XP_003581620.1| PREDICTED: LOW QUALITY PROTEIN: putative DNA ligase 4-like
[Brachypodium distachyon]
Length = 1249
Score = 330 bits (846), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 176/287 (61%), Positives = 208/287 (72%), Gaps = 60/287 (20%)
Query: 57 EPCWSLVAHNVDEVEKFFKETIEN----------------------------RDEGIVLK 88
EPCWS+ AHN+++ EKFFKET++N R+EGIVLK
Sbjct: 419 EPCWSIFAHNIEDAEKFFKETVDNRFLSTSNFLXQXXFNFPLLXSFNPSSVLREEGIVLK 478
Query: 89 DLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAP 148
DL SKWEPGDRSGKWLKLKP+YI AG+DLDV+I+GGYYGSGRRGGEVAQFLV LA
Sbjct: 479 DLDSKWEPGDRSGKWLKLKPDYIHAGTDLDVIIVGGYYGSGRRGGEVAQFLVGLAVPSND 538
Query: 149 DTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVW 208
++YP+RF+SFCRVGTGLSDEELDA+VTKLKP+FRK EYPK+ PP FY+VTNNSKERPDVW
Sbjct: 539 NSYPKRFLSFCRVGTGLSDEELDALVTKLKPHFRKNEYPKK-PPRFYEVTNNSKERPDVW 597
Query: 209 IESPEK-------------------------------SIILSITSDIRTIRSEVFSAPYS 237
IESP+K S+I+S+TSDIRTI+SEVF+APY
Sbjct: 598 IESPDKXALFHALVSCLFAGQSLRWRKNLIRXVTNCRSVIISVTSDIRTIKSEVFAAPYC 657
Query: 238 LRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 284
LRFPRI +VRYDKPWH+CLDVQSFVE+VHSSNGT QK ++ L++D
Sbjct: 658 LRFPRIQQVRYDKPWHECLDVQSFVEIVHSSNGTMQKAEDDKSLKND 704
Score = 241 bits (616), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 187/584 (32%), Positives = 279/584 (47%), Gaps = 147/584 (25%)
Query: 348 NGGTFSMNLNNSVTHCVAADNKGLKYEAAKRRGDVIHYSWVLDCCSQKKLLQLQPKYY-L 406
NGG+FSMNLN+SVTHC+AA+ K + R G +IHYSW+L+CC QK LL+LQPK L
Sbjct: 706 NGGSFSMNLNDSVTHCIAAEKKAI------RHGRIIHYSWILECCKQKCLLRLQPKSVPL 759
Query: 407 HLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNVDR-SEDPKTIDYYKKKYCPQDKW 465
H K EE+D ++D Y+WD+D+AD+KQ+ SN++ + D + YKKK+C +++
Sbjct: 760 H-------KFLEEIDSYADFYYWDIDVADLKQIFSNMNTITVDQSIVQRYKKKHCADERF 812
Query: 466 SCFHGCCIYFYHSTEPL-SPDWEVLLGLALRRLKLEISFHGGKVCNNLANATHVVVLSVL 524
F GCC+Y +H+ PL + D+ V+ LAL+R+K +++ HGG+VC++LA ATH+V++SVL
Sbjct: 813 CFFQGCCVYLHHA--PLVNEDYNVISDLALKRVKHDLTMHGGQVCSSLAPATHLVIVSVL 870
Query: 525 GYDVNFNSLTESFTAREKHLLWNKKLHVVRSQWLEDCLAKEQKSEEYEYSLKPTGMQESY 584
NF+ +SF+ E+ L +K+LHVV ++WLED + K+ K E Y+LKP ++E +
Sbjct: 871 QA-YNFDISYKSFSPAERRYLHDKRLHVVSNKWLEDSVDKQMKLPEALYNLKPDTLEEIH 929
Query: 585 LELCEEDL----DMEEPSSTLETSDKQNV---------------------SSFPDGDGKQ 619
+E E D+ D E +E S N G Q
Sbjct: 930 IERSEVDVQPSNDKHEEDEEVEISHVTNARKRGRPSSSSSRTVRAAPRPVRRTRARRGNQ 989
Query: 620 RGTRG---VSPASPKREGKRKRGRPAGGSAKKR-----------KSTVNLARRKRPHVRN 665
R G + P G+ + A ++K ++ ARR N
Sbjct: 990 RAKIGDVESEESGPGETGQDDQKLKADYTSKMEEDNSDKDQRPPQAAPRPARRTSARRGN 1049
Query: 666 KPSKI-----YQNESDESNASDETEKKEEINREENHEDREMDDEENLETRQTNVVEDLES 720
+ +KI +N+ E+ +D T K EE N +++ LE ++ N V+
Sbjct: 1050 QLAKIDYLESEENDHGETGKADYTTKMEEDNLDKDQGPPPGAQFITLEEQEPNGVK---- 1105
Query: 721 LDRGKALQQEVVKDFGKEKQTVRAPDIEMRERYHSKDS-------ETTD------KQQVD 767
L G + T +P RY SK++ ETT +Q D
Sbjct: 1106 LSTG--------------EDTTSSP------RYKSKETSGRTNVAETTSTTGEKIEQMFD 1145
Query: 768 AVQAMLLDMIPSL-------------------------GMKNEKTTNPIPKEESSSAEP- 801
V AMLL+M+PSL G P+P+ S++
Sbjct: 1146 PVHAMLLNMMPSLRQERRQDAITDPPATKLENNPPARAGSSTSSYRVPVPETVGSASNSG 1205
Query: 802 ---------------------SAEPTKKKKVSYKDIASKLLKDW 824
+A P KKKKVSYKD+A+ LLKDW
Sbjct: 1206 ISASQTGSSTYSAGVPASDPNAAAPPKKKKVSYKDMANDLLKDW 1249
>gi|75140457|sp|Q7X7E9.2|DNLI4_ORYSJ RecName: Full=Putative DNA ligase 4; AltName: Full=DNA ligase IV;
AltName: Full=Polydeoxyribonucleotide synthase [ATP] 4
gi|38346547|emb|CAD41778.2| OSJNBa0035M09.8 [Oryza sativa Japonica Group]
Length = 1322
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 172/272 (63%), Positives = 206/272 (75%), Gaps = 52/272 (19%)
Query: 57 EPCWSLVAHNVDEVEKFFKETIENR----------------------------------D 82
EPCWS++AH++D+VEKFFK+T++NR +
Sbjct: 437 EPCWSILAHSLDDVEKFFKDTVDNRFFPTSPNTDELSNLSISLMIQFRFSDYSICYVLRE 496
Query: 83 EGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVLIIGGYYGSGRRGGEVAQFLVAL 142
EGI+LKDL SKWEPGDRSGKWLKLKP+YI AG+DLDV+IIGGYYGSGRRGGEVAQFLV L
Sbjct: 497 EGIILKDLESKWEPGDRSGKWLKLKPDYIHAGADLDVIIIGGYYGSGRRGGEVAQFLVGL 556
Query: 143 AERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSK 202
A ++YP+RF+SFCRVGTGLSDEELDA+VTKLKP+FRK EYPK+ PP FY+VTN+SK
Sbjct: 557 AVPSDDNSYPKRFLSFCRVGTGLSDEELDALVTKLKPHFRKNEYPKK-PPRFYEVTNHSK 615
Query: 203 ERPDVWIESPEK-----------------SIILSITSDIRTIRSEVFSAPYSLRFPRIDR 245
ERPDVWIESP+K S+I+SITSDIRTI+SEVF+APYSLRFPRI R
Sbjct: 616 ERPDVWIESPDKQSVRFRKHLIYCITKCRSVIISITSDIRTIKSEVFAAPYSLRFPRIQR 675
Query: 246 VRYDKPWHDCLDVQSFVELVHSSNGTTQKGKE 277
+RYDKPWH+CLDVQ+FV++VHSSNGTT + +
Sbjct: 676 LRYDKPWHECLDVQAFVDIVHSSNGTTHRAAD 707
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 139/359 (38%), Positives = 216/359 (60%), Gaps = 35/359 (9%)
Query: 346 VENGGTFSMNLNNSVTHCVAADNKGLKYEAAKRRGDVIHYSWVLDCCSQKKLLQLQPKYY 405
V+NGG+FSMNLN+SVTHC+AA+ K A R+G +IHYSW+LDCC +K+LL LQPK+
Sbjct: 715 VKNGGSFSMNLNDSVTHCIAAEKK------ATRQGRIIHYSWILDCCKEKRLLHLQPKFD 768
Query: 406 LHLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNVDRS-EDPKTIDYYKKKYCPQDK 464
L K EE+D ++D ++WD+D++D+KQ+ SN+DR+ D + +YKKKYC ++
Sbjct: 769 PCLQ--PMHKFPEEIDSYADYFYWDIDISDLKQIFSNMDRAVVDSNMVHHYKKKYCADER 826
Query: 465 WSCFHGCCIYFYHSTEPL-SPDWEVLLGLALRRLKLEISFHGGKVCNNLANATHVVVLSV 523
+ F GCC+YFYH+ PL + D+ V+ LAL+R+K +++ HGG+VC+ LA ATH++++SV
Sbjct: 827 FCFFQGCCVYFYHA--PLVNADYNVISDLALKRVKQDLTMHGGQVCSILAPATHLIIVSV 884
Query: 524 LGYDVNFNSLTESFTAREKHLLWNKKLHVVRSQWLEDCLAKEQKSEEYEYSLKPTGMQES 583
L NF+ L +S E+ L +K+L VV ++WLED + K+ + E YSLKP ++E
Sbjct: 885 LQA-YNFDMLYKSLPPAERRYLHDKRLQVVSNKWLEDSVEKQTRLPETTYSLKPDTLEEI 943
Query: 584 YLELCEEDLDMEEPSSTLETSDKQNVSSFPDGDGKQRGTRGVSPASPKREGKRKRGRPAG 643
+E + ++ + LE ++K + S + RKRGRP+
Sbjct: 944 EIE--RSEETVQPCNDKLEENEKADTSHV-------------------KHAPRKRGRPSS 982
Query: 644 GSAKKRKSTVNLARRKRPHVRNKPSKIYQNESDESNASDETEKKEEINREENHEDREMD 702
+++ K RR R N+ +KI E +ES+ ET ++I +N E+D
Sbjct: 983 SASRTAKPAPRPVRRTRARRGNQHAKIDDVEPEESDHG-ETGLDDQIPDTDNISKMEVD 1040
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 50/122 (40%), Gaps = 47/122 (38%)
Query: 750 RERYHSKDSETTDK--QQVDAVQAMLLDMIPSLGMKNEKTTN------------------ 789
R+ + S T +K Q VD + AMLLDMIPSLG N
Sbjct: 1201 RDTAETTSSATCEKMEQMVDPLHAMLLDMIPSLGQMKTDVGNRVAEAKAETNPPWVGSST 1260
Query: 790 -----PIPK------------------EESSSAEPSAEPT----KKKKVSYKDIASKLLK 822
P+P+ S+ P+ +PT KKKKVSYKD+A LLK
Sbjct: 1261 SSYVAPVPQASASSASSSGVPAPHAGSSTQSTGVPAPDPTAGAPKKKKVSYKDVAGALLK 1320
Query: 823 DW 824
DW
Sbjct: 1321 DW 1322
>gi|384252539|gb|EIE26015.1| hypothetical protein COCSUDRAFT_40196 [Coccomyxa subellipsoidea
C-169]
Length = 1267
Score = 258 bits (659), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 185/600 (30%), Positives = 292/600 (48%), Gaps = 91/600 (15%)
Query: 55 TGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAG 114
TG P S +++ +D++++ F+E+I +EGIV+K S W DR WLK+K +Y+
Sbjct: 432 TGVP-GSKLSYVLDDIQEKFEESIRVNEEGIVVKAADSPWRCNDRGMAWLKIKADYVHK- 489
Query: 115 SDLDVLIIGGYYGSGRRGGEVAQFLVALAERP-APDTYPRRFISFCRVGTGLSDEELDAV 173
++D +IIG +G+GRRGG +A++L+ALAE P T P F+SFC VGTG++D + D +
Sbjct: 490 VEIDAVIIGAKFGTGRRGGAIAEYLLALAEVPQGGTTEPSTFVSFCVVGTGVNDADRDTL 549
Query: 174 VTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFS 233
+L+P F K P Y+ T KERPDVWI+ P +S++L + +D+RTI S+ F+
Sbjct: 550 AKRLEPLFVDNVKGKNCVPRCYRTTGMPKERPDVWIKDPTRSVVLQVQADVRTIVSKQFA 609
Query: 234 APYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPK------ 287
+ +SLRFPR+ RVR+DK D Q ++V S+ G G+ G + P
Sbjct: 610 SRHSLRFPRVQRVRWDKGPLDIQTDQELWDIVESNQGAIVGGE---GHDMESPAGKGKGR 666
Query: 288 QFRSSRKGE---KKNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFVNVP---PAYSLDSL 341
+ + KG + S V FL TDVS I+ E D + YFV P Y L
Sbjct: 667 GKKRAVKGAATPAQQRSKVVEQFLPTDVSHIRRECDALRDSLVYFVPAPVKTAKYPKKYL 726
Query: 342 HKMVVENGGTFSMNLNNSVTHCVAADNKGLKYEAAKRRGDVIHYSWVLDCCSQKKLLQLQ 401
++V GG + N VTH +A D ++A + + D+I W+L+C +++ L+ L+
Sbjct: 727 EEVVARLGGKVTQNYVPRVTHVIAQDANDPFFKARRDKVDMISVEWLLECAAKQALISLR 786
Query: 402 PKYYLHLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSN----------------VDR 445
P +Y+HL+ ++ + V + D+Y+ D+ D+K +L+N D
Sbjct: 787 PHHYMHLTRDTRNNV-PNVCIYGDMYYEDVSAIDVKVILNNHAHLEPGALDDLAALMADE 845
Query: 446 SEDPK---------TIDYYKK-------------------KYCPQDKWSC-FHGCCIYFY 476
+ +P+ T YK+ +Y D +C F GC I
Sbjct: 846 AGEPQPGVASRADGTAQLYKRLKRKPGVEDIMLAVDRELAEYGLLDSTACLFRGCHICLL 905
Query: 477 H---STEPLSPD---------WEVLLGLALRRLKLEISFHGGKVCNNL-ANATHVVVL-- 521
T P + D L L +R KLE+ HGGK + + + TH+VV+
Sbjct: 906 QLPDDTCPAAKDSAQESAAAAKRELAALQAQRRKLEVMLHGGKAQDAIDMSTTHIVVIPP 965
Query: 522 -----------SVLGYDVNFNSLTESFTAREKHLLWNKKLHVVRSQWLEDCLAKEQKSEE 570
+LG + T T K LL ++H+V WLE+ L +++ E
Sbjct: 966 ANCAMPRLSPADLLGILHSEKGGTAGLTTLRK-LLAAGEVHIVMQSWLEESLEALRQAAE 1024
>gi|443721461|gb|ELU10753.1| hypothetical protein CAPTEDRAFT_17890 [Capitella teleta]
Length = 905
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 164/509 (32%), Positives = 264/509 (51%), Gaps = 27/509 (5%)
Query: 74 FKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSGRRG 132
E I+ R+EGI++KD S ++P R G W K+KPEY+ D LD++++GGY G GRR
Sbjct: 410 LNEAIDGREEGIMVKDPDSVYKPNTRKGGWYKIKPEYVGGLMDELDLIVVGGYMGVGRRA 469
Query: 133 GEVAQFLVALAERPA-PDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAP 191
G ++ FL ALA P PD P F SFCRVG+G S +EL KL+P+++ Y+ K P
Sbjct: 470 GLMSHFLCALAVPPEDPDDKPSVFHSFCRVGSGYSRKELFEFNQKLEPHWQMYK--KSKP 527
Query: 192 PSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKP 251
P++ + + K+RPD I P KS IL I + S+ F + +LRFPR++++R DK
Sbjct: 528 PAWLHLASGDKQRPDACIH-PSKSAILQIKA-AEITNSDQFKSGCTLRFPRVEKIRMDKA 585
Query: 252 WHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSS--RKGEKKNVSIVPSHFLQ 309
WH+C+ + +L S+G G+ ++ +P + R RK E+ +V S F
Sbjct: 586 WHECMSTKEMKDLRQKSDGKLA-GQLANADEEGEPSKKRRKIFRKAERPSVL---SQFKG 641
Query: 310 TDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMNLNNSVTHCVAADNK 369
DVS + + + S +N ++S L ++E GG+ + N S T+CV AD
Sbjct: 642 IDVSCVTKVSELLSGKELCVINGTTSHSKSDLETKILECGGSIAQN-PGSDTYCVIADKV 700
Query: 370 GLKYEAAKRRG--DVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEVDEFSDLY 427
+K R+G D++ SW+L C Q +L+ P +H S ++K + E D F D +
Sbjct: 701 QIKVNNLIRKGSHDIVRSSWLLKCVDQSRLIPWSPSDMVHTSATTKARFSAEYDSFGDSF 760
Query: 428 FWDLDLADIKQLLSNVD--RSEDPKTIDYYKKKYCPQDK-WSCFHGCCIYFYHSTEPLSP 484
F D + ++++ ++V+ R+ + + + Y P D F C +Y ++ P
Sbjct: 761 FNDTSVEELRETFTHVNQVRAISSEEMADVEMTYFPHDSHLGLFRLCRVYMDCNSVVDDP 820
Query: 485 DWEVLLGLALRRLKLEISFHGGKVCNNLANATHVVVLSVLGYDVNFNSLTESFTAREKHL 544
+ L L++ FHG K+C NL +A+HVV V+ L+ R +
Sbjct: 821 STSIQC-CPLDLSALDLRFHGAKICENLESASHVV--------VHTKDLSRVKELRNLNK 871
Query: 545 LWNKKLHVVRSQWLEDCLAKEQKSEEYEY 573
L +K H+V W++DC+ +E+ E Y
Sbjct: 872 LRRRKFHMVTEHWVKDCIEEEKILNERRY 900
>gi|145351923|ref|XP_001420309.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580543|gb|ABO98602.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 994
Score = 255 bits (652), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 159/506 (31%), Positives = 265/506 (52%), Gaps = 47/506 (9%)
Query: 41 MLSQLRSQIMAADQTGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRS 100
M +R++I+ A T + +S V +++E+ E ++N +EG+V+KDL W PGDRS
Sbjct: 472 MCGNIRARILLA--TPDCAFSRVGSTKEDIERALLEAMDNGEEGLVIKDLDGPWIPGDRS 529
Query: 101 GKWLKLKPEYIRAGSDLDVLIIGGYYGSGR-RGGEVAQFLVALAE------RPAPDTYPR 153
W+K+KP+Y+ + DLDV++IGGYYG+G RGG+++QFL + E A D
Sbjct: 530 NNWMKIKPDYL-SSEDLDVVLIGGYYGAGELRGGKISQFLCGIVEATNDPISTASDGV-- 586
Query: 154 RFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE 213
+ +SFC+VGTG+S +LD + ++L + + E P+ Y VT+ E+PDVWI P+
Sbjct: 587 KIMSFCKVGTGISAMQLDDLRSRLGDFMHR-EKPQDMN---YNVTDAYNEKPDVWIWPPQ 642
Query: 214 KSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQ 273
+S+++++ DIR IR+ F+ YSLRFPR+ +RYDK W D L + ++ + T +
Sbjct: 643 RSLVVTVKGDIRAIRTTTFATGYSLRFPRVTGIRYDKKWSDILTLCDLLKTIEEEVPTLK 702
Query: 274 KGKEYGGLQDDKPKQFRSSRKGEKKN--VSIVPSHFLQTDVSDIKGETSIFSDMVFYFVN 331
+ D + ++RK + +++P+H + DVS + E+ IF +M + N
Sbjct: 703 -------VNIDDTRGGTNARKRSRTTGPATLLPAHLMPVDVSGVVQESEIFKNMQVHIAN 755
Query: 332 VPPAYSLDSLHKMVVENGGTFSMNLNNSVTHCVAADNKGLKYEAAKRRGDVIHYSWVLDC 391
L K V+ GT S + VTH VA + G K+ A R GDV +W+ +C
Sbjct: 756 CESREQKQELFKAVIARSGTTSELWHKHVTHSVALNRDGSKFRTASREGDVYTIAWLQEC 815
Query: 392 CSQKKLLQLQPKYYLHLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNV-DRSEDPK 450
+ +++ +P++ LHLS ++ + +D + D +F D +LAD+ L+ V D+++ K
Sbjct: 816 IHEGRVVPPKPRHRLHLSATTWYG-TDAMDRYGDDHFSDCNLADVHALVHQVGDQTKRWK 874
Query: 451 T--------IDYYKKKYCPQDKWSCFHGCCIYFYHSTEPLSPDWEV---------LLGLA 493
T +D C K F GC + + L D V +L
Sbjct: 875 TAEVPALVELDREYPSVCADVKLLTFRGCV---FEIDDSLGKDARVDEQSSMFPSVLAGE 931
Query: 494 LRRLKLEISFHGGKVCNNLANATHVV 519
R ++ + +GGK+ TH+V
Sbjct: 932 RRNVEQILRIYGGKLAPEGRMGTHIV 957
>gi|308809329|ref|XP_003081974.1| DNA ligase IV (ISS) [Ostreococcus tauri]
gi|116060441|emb|CAL55777.1| DNA ligase IV (ISS) [Ostreococcus tauri]
Length = 1111
Score = 252 bits (643), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 159/506 (31%), Positives = 254/506 (50%), Gaps = 34/506 (6%)
Query: 38 HVYMLSQLRSQIMAADQTGEP-C-WSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWE 95
HV+ +S + I A P C +S + ++E+ E IE DEG+V+KDL S+W
Sbjct: 460 HVHPVSAMCGNIKARILLATPDCEFSKIGSTKQDIERALLEAIEAGDEGLVIKDLNSEWI 519
Query: 96 PGDRSGKWLKLKPEYIRAGSDLDVLIIGGYYGSGR-RGGEVAQFLVALAERPAPDT--YP 152
PGDRSG W+K+KP+Y ++ DLDVL+IGGYYG+G RGG+++QFLV + E T +
Sbjct: 520 PGDRSGNWMKIKPDYCKS-EDLDVLLIGGYYGAGELRGGKISQFLVGIIESTNDPTSAHG 578
Query: 153 RRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESP 212
+ +SFC+VGTG+S ELD + +L Y + E P+ Y VT+ ERPDVWI P
Sbjct: 579 IKIMSFCKVGTGISATELDDLRNRLGDYMHR-EKPREMD---YNVTDAYSERPDVWIWPP 634
Query: 213 EKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTT 272
++S+++ + DIR IRS ++ YSLRFPR+ +RYDK W D L +++
Sbjct: 635 QRSVVVRVKGDIRCIRSMTYATGYSLRFPRVTGIRYDKTWSDILTNAELKQIIEEDRPNI 694
Query: 273 QKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFVNV 332
G + K R +++P+H + DVS + E+ +F + + VN
Sbjct: 695 AMDMGEGHMNSRK-------RTRAAALTTLLPAHLMPVDVSGVVPESEVFKSLQIHIVNC 747
Query: 333 PPAYSLDSLHKMVVENGGTFSMNLNNSVTHCVAADNKGLKYEAAKRRGDVIHYSWVLDCC 392
L K ++ GG S ++ VTH VAA+ G K+ AA GDV W+ C
Sbjct: 748 ESREQKQELFKAIIARGGRTSEMWHSDVTHSVAANRDGAKFIAASHHGDVYTIDWLKQCI 807
Query: 393 SQKKLLQLQPKYYLHLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNV-------DR 445
Q +++ +P++ L+L+ S+ +D + D + + DI+ LL V +
Sbjct: 808 QQNRIVTPRPRHRLNLATSTWYG-SNIMDRYGDDHAIPCNEEDIRALLHQVGDQAKRWET 866
Query: 446 SEDPKTIDYYKK--KYCPQDKWSCFHGCCIYFYHSTEPLSPDW-------EVLLGLALRR 496
SE P ++ ++ K+ F C S + +W ++L
Sbjct: 867 SEVPAMVELTREYPNLLKSMKYCTFSECVFEIDDSCDVQHNEWMSESEHFRLMLHEERFN 926
Query: 497 LKLEISFHGGKVCNNLANATHVVVLS 522
++L + GG + + TH+V ++
Sbjct: 927 VELRLRLFGGTMAPEGRSGTHIVRMN 952
>gi|351702718|gb|EHB05637.1| DNA ligase 4 [Heterocephalus glaber]
Length = 911
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 166/523 (31%), Positives = 265/523 (50%), Gaps = 34/523 (6%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLII 122
AH EV E I+ R+EGI++K S ++P R WLK+KPEY+ D LD+LI+
Sbjct: 408 AHTKKEVIDALNEAIDKREEGIMIKHPLSIYKPDKRGEGWLKIKPEYVNGLMDELDILIV 467
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
GGY+G G RGG ++ FL A+AE+P P P F + CRVG+G + +EL + KL +++
Sbjct: 468 GGYWGKGSRGGMMSHFLCAVAEKPPPGEKPAVFHTLCRVGSGYTMKELYDLGLKLAKHWK 527
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
++ K+APPS E+P+V+IE P S+I+ I + + SE++ +LRFPR
Sbjct: 528 PFQ--KKAPPSSILC---GTEKPEVYIE-PRNSVIVQIKA-AEIVPSEMYKTSCTLRFPR 580
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSI 302
I+++R DK WH+C+ + +L ++G Y G DD+PK+ + + K V
Sbjct: 581 IEKIRDDKEWHECMTLDELEQLRGKASGKLASKHLYVG-SDDEPKEKKRKAAPKMKKVIG 639
Query: 303 VPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMNLNNSVTH 362
+ + ++S+I ++IF D+ F ++ ++S L + E GG N T+
Sbjct: 640 ILENLKAPNLSNISKVSNIFEDVEFCVMSGTDSHSKLDLENRIAELGGYIVQNPGPD-TY 698
Query: 363 CVAA--DNKGLKYEAAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEV 420
CV A +N ++ + + DV+ +W+L+C K L P++ +H+ S+++ E
Sbjct: 699 CVIAGLENIRVRNIVSSDKHDVVRPAWLLECFKTKTCLPWHPRFMIHMCPSTRQHFAREY 758
Query: 421 DEFSDLYFWDLDLADIKQLLSNVDRSE-------DPKTIDYYKKKYCPQDKWSCFHGCCI 473
D + D YF D DL +K++ S + S P D + + S F +
Sbjct: 759 DRYGDSYFVDTDLNQLKEVFSGIKNSNAQTPKEMAPVIADLEYRYSWDRSSLSMFRHHTV 818
Query: 474 Y--FYHSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNLA-NATHVVVLSVLGYDVNF 530
Y Y LS E G L + LE+ FHG KV + LA +HV+V G D
Sbjct: 819 YLDLYTVINDLSTKIE---GTRLAIVALELRFHGAKVVSCLAEGVSHVIV----GED--- 868
Query: 531 NSLTESFTAREKHLLWNKKLHVVRSQWLEDCLAKEQKSEEYEY 573
S F A + L KK ++R W+ D + K + EE +Y
Sbjct: 869 QSRVADFKAFRRSL--KKKFKILRECWVTDSIDKCELEEESQY 909
>gi|301760197|ref|XP_002915906.1| PREDICTED: DNA ligase 4-like [Ailuropoda melanoleuca]
gi|281351498|gb|EFB27082.1| hypothetical protein PANDA_003934 [Ailuropoda melanoleuca]
Length = 911
Score = 238 bits (607), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 165/526 (31%), Positives = 267/526 (50%), Gaps = 40/526 (7%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLII 122
AH EV E I+ R+EGI++K S ++P R WLK+KPEY+ D LD+LI+
Sbjct: 408 AHTQKEVIDALNEAIDKREEGIMIKHPLSIYKPDKRGEGWLKIKPEYVDGLMDELDILIV 467
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
GGY+G G RGG ++ FL A+AE+P P P F + CRVG+G + +EL + KL +++
Sbjct: 468 GGYWGKGSRGGMMSHFLCAVAEKPPPGEKPSVFHTLCRVGSGYTMKELYDLGLKLAKHWK 527
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
+ K+APPS E+P+V+IE P S+I+ + + + S+++ A +LRFPR
Sbjct: 528 PFH--KKAPPSSILC---GTEKPEVYIE-PCHSVIVQVKA-TEIVSSDMYKAGCTLRFPR 580
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSI 302
I+R+R DK WH+C V +L ++G Y G DD+P++ + + K V
Sbjct: 581 IERIREDKEWHECTTVDDLEQLRGKASGKLASKHLYVG-DDDEPQEKKRKAAPKVKKVIG 639
Query: 303 VPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMNLNNSVTH 362
+ H ++S++ +IF D+ F ++ ++ L + E GG N T+
Sbjct: 640 IIEHLKAPNLSNVNKVCNIFEDVEFCVMSGTGSHPKPDLENRIAEFGGYIVQNPGPD-TY 698
Query: 363 CVAADNKGLKYE--AAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEV 420
CV A ++ ++ + + + DV+ W+L+C K + QP++ +H+ S+K+ E
Sbjct: 699 CVIAGSENIRVKNIISSNKHDVVKPEWLLECFKTKSCVPWQPRFMIHMCPSTKEHFAREY 758
Query: 421 DEFSDLYFWDLDLADIKQLLSNVDRS------EDPKTIDYYKKKY----CPQDKWSCFHG 470
D + D YF D DL +K++ S + S E I + + +Y CP S F
Sbjct: 759 DHYGDSYFIDTDLNQLKEVFSGIKNSGEQTPGEMASVIAHLEFRYSWDRCP---LSMFRQ 815
Query: 471 CCIY--FYHSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNLANA-THVVVLSVLGYD 527
IY Y LS E G L + LE+ FHG KV + LA +HV+V G D
Sbjct: 816 HIIYVDVYAVINDLSTKIE---GTRLAVMGLELRFHGAKVVSRLAQGVSHVIV----GED 868
Query: 528 VNFNSLTESFTAREKHLLWNKKLHVVRSQWLEDCLAKEQKSEEYEY 573
+ + ++F K +K +++ W+ D + K + EE Y
Sbjct: 869 RSRVADLKAFRRTLK-----RKFKILQQDWVTDSIDKCELQEENRY 909
>gi|156739291|ref|NP_001096593.1| DNA ligase 4 [Danio rerio]
gi|152012596|gb|AAI50237.1| Zgc:165595 protein [Danio rerio]
Length = 909
Score = 233 bits (595), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 152/516 (29%), Positives = 257/516 (49%), Gaps = 31/516 (6%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGG 124
+ EV E I+NR+EGI++KD S ++P R WLK+KPEY+ D LD+LI+GG
Sbjct: 415 TMQEVVNSLNEAIDNREEGIMVKDPMSIYKPDKRGEGWLKIKPEYVDGLMDELDLLIVGG 474
Query: 125 YYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKY 184
Y+G GRR G ++ FL A+AE P+P P F + CR+G+G + +EL + KL +++ Y
Sbjct: 475 YWGKGRRSGMLSHFLCAVAEVPSPGEKPTVFHTLCRIGSGYTLKELYDLGVKLAKHWKVY 534
Query: 185 EYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRID 244
K PP+ E+P+V+IE P S+IL + + + SE++ +LRFPRI+
Sbjct: 535 N--KNNPPAAILC---GTEKPEVYIE-PRNSVILQVKA-AEIVTSEMYKTDCTLRFPRIE 587
Query: 245 RVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVP 304
R+R DK WH C+ + + ++G + + + +D+P++ + + K V
Sbjct: 588 RIREDKEWHQCMTLDDLNQFRSKASG--KLASRHLNIHEDQPEKKKRKIVAKPKKTIGVI 645
Query: 305 SHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMNLNNSVTHC- 363
HF D+S + ET +F ++ F +N +S L K V GG N T+C
Sbjct: 646 DHFKSQDLSKVAKETDMFEEVEFCVINGDDEHSKAELEKGVARCGGIVVQNPGKD-TYCA 704
Query: 364 -VAADNKGLKYEAAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEVDE 422
A N +K + + DV+ +W+L+C K+++ QP++ +H+S S+++ +E D+
Sbjct: 705 IAAVQNMRVKNLISSDQHDVVWATWLLECLENKQVIPWQPRHMIHMSPSTREHFAKEYDQ 764
Query: 423 FSDLYFWDLDLADIKQLLSNVDRSEDPKTIDYYKKKYCPQDKW-----SCFHGCCIYFYH 477
+ D Y+ D ++ ++ + +E K++ + + ++ W S F YF
Sbjct: 765 YGDSYYVDTSEQQLRDVIERISSAE-VKSLSVAQIE--AENAWDDLPTSIFRPYSAYFDR 821
Query: 478 STEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNLANATHVVVLSVLGYDVNFNSLTESF 537
+ P V+ G L LE FHGGKV L VV+ + ++ +L
Sbjct: 822 CADIGDPK-SVICGTCLDTRALEFRFHGGKVVEKLKEGISHVVVEDMKRALDLKTLRR-- 878
Query: 538 TAREKHLLWNKKLHVVRSQWLEDCLAKEQKSEEYEY 573
L KK +V W+ D + +E +Y
Sbjct: 879 -------LHAKKFKIVHESWVTDSIKAGHVKDEIDY 907
>gi|296188957|ref|XP_002742576.1| PREDICTED: DNA ligase 4 isoform 1 [Callithrix jacchus]
Length = 911
Score = 233 bits (594), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 159/523 (30%), Positives = 261/523 (49%), Gaps = 34/523 (6%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLII 122
AH DEV E I+ R+EGI++K S ++P R WLK+KPEY+ D LD+LI+
Sbjct: 408 AHTKDEVIDALNEAIDKREEGIMIKRPLSIYKPDKRGEGWLKIKPEYVSGLMDELDILIV 467
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
GGY+G G RGG ++ FL A+AE+P P P F + RVG+G + +EL + +L Y+R
Sbjct: 468 GGYWGKGSRGGMMSHFLCAVAEKPPPGKKPSVFHTLSRVGSGCTMKELYDLGLRLAKYWR 527
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
+ K+ PPS E+P+V+IE P S+I+ I + + S+++ +LRFPR
Sbjct: 528 PFH--KKTPPSSILC---GTEKPEVYIE-PCNSVIVQIKA-AEIVPSDIYKTGCTLRFPR 580
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSI 302
I+++R DK WH+C+ + +L ++G Y G D P++ R + KK + I
Sbjct: 581 IEKIRDDKEWHECMTLDDLEQLRGKASGKLASKHFYVGGDDGPPEKKRKAPPKMKKVIGI 640
Query: 303 VPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMNLNNSVTH 362
+ H +++++ ++IF D+VF ++ + L + E GG N T+
Sbjct: 641 I-EHLKAPNLTNVNKISNIFEDVVFCVMSGTDSQPKSDLENRIAEFGGYIVQNPGPD-TY 698
Query: 363 CVAADNKGLKYE--AAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEV 420
CV A ++ ++ + + DV+ +W+L+C K + QP + +H+ S+K+ E
Sbjct: 699 CVIAGSENIRVKNIILSNKYDVVKPAWLLECFKTKSFVPWQPCFMIHMCPSTKEHFAREY 758
Query: 421 DEFSDLYFWDLDLADIKQLLSNVDRS------EDPKTIDYYKKKYC-PQDKWSCFHGCCI 473
D + D YF D DL +K++ S + S E I + +Y + S F I
Sbjct: 759 DCYGDSYFVDTDLNQLKEVFSGIKNSNKLTPEEMASVIADLEHRYSWDRSPLSMFRRHTI 818
Query: 474 Y--FYHSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNLA-NATHVVVLSVLGYDVNF 530
Y Y LS E G L LE+ FHGG V + LA +HV++ +F
Sbjct: 819 YLDLYAVINDLSTKTE---GTRLAIKALELRFHGGTVVSCLAEGVSHVIIGEDHSRVADF 875
Query: 531 NSLTESFTAREKHLLWNKKLHVVRSQWLEDCLAKEQKSEEYEY 573
+ +F +K +++ W+ D + K + EE +Y
Sbjct: 876 KAFRRTF---------KRKFKILKDSWVTDSIDKCELQEENQY 909
>gi|397524265|ref|XP_003832121.1| PREDICTED: DNA ligase 4 isoform 1 [Pan paniscus]
gi|397524267|ref|XP_003832122.1| PREDICTED: DNA ligase 4 isoform 2 [Pan paniscus]
gi|397524269|ref|XP_003832123.1| PREDICTED: DNA ligase 4 isoform 3 [Pan paniscus]
gi|397524271|ref|XP_003832124.1| PREDICTED: DNA ligase 4 isoform 4 [Pan paniscus]
Length = 911
Score = 232 bits (592), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 156/523 (29%), Positives = 263/523 (50%), Gaps = 34/523 (6%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLII 122
AH +EV E I+ R+EGI++K S ++P R WLK+KPEY+ D LD+LI+
Sbjct: 408 AHTKNEVIDALNEAIDKREEGIMVKQPLSIYKPDKRGEGWLKIKPEYVSGLMDELDILIV 467
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
GGY+G G RGG ++ FL A+AE+P P P F + RVG+G + +EL + KL Y++
Sbjct: 468 GGYWGKGSRGGMMSHFLCAVAEKPPPGEKPSVFHTLSRVGSGCTMKELYDLGLKLAKYWK 527
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
+ ++APPS E+P+V+IE P S+I+ I + + S+++ +LRFPR
Sbjct: 528 PFH--RKAPPSSILC---GTEKPEVYIE-PCNSVIVQIKA-AEIVPSDMYKTGCTLRFPR 580
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSI 302
I+++R DK WH+C+ + +L ++G Y G DD+P++ R + K V
Sbjct: 581 IEKIRDDKEWHECMTLDDLEQLRGKASGKLASKHLYIG-GDDEPQEKRRKAAPKMKKVIG 639
Query: 303 VPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMNLNNSVTH 362
+ H +++++ ++IF D+ F ++ + L + E GG N T+
Sbjct: 640 IIEHLKAPNLTNVNKISNIFEDVEFCVMSGTDSQPKPDLENRIAEFGGYIVQNPGPD-TY 698
Query: 363 CVAADNKGLKYE--AAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEV 420
CV A +K ++ + + + DV+ +W+L+C K + QP++ +H+ S+K+ E
Sbjct: 699 CVIAGSKNIRVKNIISSNKHDVVKPAWLLECFKTKSFVPWQPRFMIHMCPSTKEHFAREY 758
Query: 421 DEFSDLYFWDLDLADIKQLLSNVDRS--EDPKTIDYYKKKYCPQDKWSC-----FHGCCI 473
D + D YF D DL +K++ S + S + P+ + + W C F +
Sbjct: 759 DCYGDSYFIDTDLNQLKEVFSGIKNSNEQTPEEMASLIADLEYRYSWDCSPLSMFRRHTV 818
Query: 474 YF--YHSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNLA-NATHVVVLSVLGYDVNF 530
Y Y LS E G L LE+ FHG KV + LA +HV++ +F
Sbjct: 819 YLDSYAVINDLSTKNE---GTRLAIKALELRFHGAKVVSCLAEGVSHVIIGEDHSRVADF 875
Query: 531 NSLTESFTAREKHLLWNKKLHVVRSQWLEDCLAKEQKSEEYEY 573
+ +F +K +++ W+ D + K + EE +Y
Sbjct: 876 KAFRRTF---------KRKFKILKESWVTDSIDKCELQEENQY 909
>gi|114650627|ref|XP_509726.2| PREDICTED: DNA ligase 4 isoform 2 [Pan troglodytes]
gi|114650629|ref|XP_001135359.1| PREDICTED: DNA ligase 4 isoform 1 [Pan troglodytes]
gi|332841618|ref|XP_003314254.1| PREDICTED: DNA ligase 4 [Pan troglodytes]
gi|410216076|gb|JAA05257.1| ligase IV, DNA, ATP-dependent [Pan troglodytes]
gi|410216078|gb|JAA05258.1| ligase IV, DNA, ATP-dependent [Pan troglodytes]
gi|410259034|gb|JAA17483.1| ligase IV, DNA, ATP-dependent [Pan troglodytes]
gi|410259036|gb|JAA17484.1| ligase IV, DNA, ATP-dependent [Pan troglodytes]
gi|410299716|gb|JAA28458.1| ligase IV, DNA, ATP-dependent [Pan troglodytes]
gi|410338935|gb|JAA38414.1| ligase IV, DNA, ATP-dependent [Pan troglodytes]
gi|410338937|gb|JAA38415.1| ligase IV, DNA, ATP-dependent [Pan troglodytes]
Length = 911
Score = 232 bits (591), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 156/523 (29%), Positives = 263/523 (50%), Gaps = 34/523 (6%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLII 122
AH +EV E I+ R+EGI++K S ++P R WLK+KPEY+ D LD+LI+
Sbjct: 408 AHTKNEVIDALNEAIDKREEGIMVKQPLSIYKPDKRGEGWLKIKPEYVSGLMDELDILIV 467
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
GGY+G G RGG ++ FL A+AE+P P P F + RVG+G + +EL + KL Y++
Sbjct: 468 GGYWGKGSRGGMMSHFLCAVAEKPPPGEKPSVFHTLSRVGSGCTMKELYDLGLKLAKYWK 527
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
+ ++APPS E+P+V+IE P S+I+ I + + S+++ +LRFPR
Sbjct: 528 PFH--RKAPPSSILC---GTEKPEVYIE-PCNSVIVQIKA-AEIVPSDMYKTGCTLRFPR 580
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSI 302
I+++R DK WH+C+ + +L ++G Y G DD+P++ R + K V
Sbjct: 581 IEKIRDDKEWHECMTLDDLEQLRGKASGKLASKHLYIG-GDDEPQEKRRKAAPKMKKVIG 639
Query: 303 VPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMNLNNSVTH 362
+ H +++++ ++IF D+ F ++ + L + E GG N T+
Sbjct: 640 IIEHLKAPNLTNVNKISNIFEDVEFCVMSGTDSQPKPDLENRIAEFGGYIVQNPGPD-TY 698
Query: 363 CVAADNKGLKYE--AAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEV 420
CV A +K ++ + + + DV+ +W+L+C K + QP++ +H+ S+K+ E
Sbjct: 699 CVIAGSKNIRVKNIISSNKHDVVKPAWLLECFKTKSFVPWQPRFMIHMCPSTKEHFAREY 758
Query: 421 DEFSDLYFWDLDLADIKQLLSNVDRS--EDPKTIDYYKKKYCPQDKWSC-----FHGCCI 473
D + D YF D DL +K++ S + S + P+ + + W C F +
Sbjct: 759 DCYGDSYFIDTDLNQLKEVFSGIKNSNEQTPEEMASLIADLEYRYSWDCSPLSMFRRHTV 818
Query: 474 YF--YHSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNLA-NATHVVVLSVLGYDVNF 530
Y Y LS E G L LE+ FHG KV + LA +HV++ +F
Sbjct: 819 YLDSYAVINDLSTKNE---GTRLAIKALELRFHGAKVVSCLAEGVSHVIIGEDHSRVADF 875
Query: 531 NSLTESFTAREKHLLWNKKLHVVRSQWLEDCLAKEQKSEEYEY 573
+ +F +K +++ W+ D + K + EE +Y
Sbjct: 876 KAFRRTF---------KRKFKILKESWVTDSIDKCELQEENQY 909
>gi|397524273|ref|XP_003832125.1| PREDICTED: DNA ligase 4 isoform 5 [Pan paniscus]
Length = 844
Score = 231 bits (590), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 156/523 (29%), Positives = 263/523 (50%), Gaps = 34/523 (6%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLII 122
AH +EV E I+ R+EGI++K S ++P R WLK+KPEY+ D LD+LI+
Sbjct: 341 AHTKNEVIDALNEAIDKREEGIMVKQPLSIYKPDKRGEGWLKIKPEYVSGLMDELDILIV 400
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
GGY+G G RGG ++ FL A+AE+P P P F + RVG+G + +EL + KL Y++
Sbjct: 401 GGYWGKGSRGGMMSHFLCAVAEKPPPGEKPSVFHTLSRVGSGCTMKELYDLGLKLAKYWK 460
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
+ ++APPS E+P+V+IE P S+I+ I + + S+++ +LRFPR
Sbjct: 461 PFH--RKAPPSSILC---GTEKPEVYIE-PCNSVIVQIKA-AEIVPSDMYKTGCTLRFPR 513
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSI 302
I+++R DK WH+C+ + +L ++G Y G DD+P++ R + K V
Sbjct: 514 IEKIRDDKEWHECMTLDDLEQLRGKASGKLASKHLYIG-GDDEPQEKRRKAAPKMKKVIG 572
Query: 303 VPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMNLNNSVTH 362
+ H +++++ ++IF D+ F ++ + L + E GG N T+
Sbjct: 573 IIEHLKAPNLTNVNKISNIFEDVEFCVMSGTDSQPKPDLENRIAEFGGYIVQNPGPD-TY 631
Query: 363 CVAADNKGLKYE--AAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEV 420
CV A +K ++ + + + DV+ +W+L+C K + QP++ +H+ S+K+ E
Sbjct: 632 CVIAGSKNIRVKNIISSNKHDVVKPAWLLECFKTKSFVPWQPRFMIHMCPSTKEHFAREY 691
Query: 421 DEFSDLYFWDLDLADIKQLLSNVDRSED--PKTIDYYKKKYCPQDKWSC-----FHGCCI 473
D + D YF D DL +K++ S + S + P+ + + W C F +
Sbjct: 692 DCYGDSYFIDTDLNQLKEVFSGIKNSNEQTPEEMASLIADLEYRYSWDCSPLSMFRRHTV 751
Query: 474 YF--YHSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNLA-NATHVVVLSVLGYDVNF 530
Y Y LS E G L LE+ FHG KV + LA +HV++ +F
Sbjct: 752 YLDSYAVINDLSTKNE---GTRLAIKALELRFHGAKVVSCLAEGVSHVIIGEDHSRVADF 808
Query: 531 NSLTESFTAREKHLLWNKKLHVVRSQWLEDCLAKEQKSEEYEY 573
+ +F +K +++ W+ D + K + EE +Y
Sbjct: 809 KAFRRTF---------KRKFKILKESWVTDSIDKCELQEENQY 842
>gi|332841620|ref|XP_003314255.1| PREDICTED: DNA ligase 4 [Pan troglodytes]
Length = 844
Score = 231 bits (590), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 156/523 (29%), Positives = 263/523 (50%), Gaps = 34/523 (6%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLII 122
AH +EV E I+ R+EGI++K S ++P R WLK+KPEY+ D LD+LI+
Sbjct: 341 AHTKNEVIDALNEAIDKREEGIMVKQPLSIYKPDKRGEGWLKIKPEYVSGLMDELDILIV 400
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
GGY+G G RGG ++ FL A+AE+P P P F + RVG+G + +EL + KL Y++
Sbjct: 401 GGYWGKGSRGGMMSHFLCAVAEKPPPGEKPSVFHTLSRVGSGCTMKELYDLGLKLAKYWK 460
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
+ ++APPS E+P+V+IE P S+I+ I + + S+++ +LRFPR
Sbjct: 461 PFH--RKAPPSSILC---GTEKPEVYIE-PCNSVIVQIKA-AEIVPSDMYKTGCTLRFPR 513
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSI 302
I+++R DK WH+C+ + +L ++G Y G DD+P++ R + K V
Sbjct: 514 IEKIRDDKEWHECMTLDDLEQLRGKASGKLASKHLYIG-GDDEPQEKRRKAAPKMKKVIG 572
Query: 303 VPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMNLNNSVTH 362
+ H +++++ ++IF D+ F ++ + L + E GG N T+
Sbjct: 573 IIEHLKAPNLTNVNKISNIFEDVEFCVMSGTDSQPKPDLENRIAEFGGYIVQNPGPD-TY 631
Query: 363 CVAADNKGLKYE--AAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEV 420
CV A +K ++ + + + DV+ +W+L+C K + QP++ +H+ S+K+ E
Sbjct: 632 CVIAGSKNIRVKNIISSNKHDVVKPAWLLECFKTKSFVPWQPRFMIHMCPSTKEHFAREY 691
Query: 421 DEFSDLYFWDLDLADIKQLLSNVDRSED--PKTIDYYKKKYCPQDKWSC-----FHGCCI 473
D + D YF D DL +K++ S + S + P+ + + W C F +
Sbjct: 692 DCYGDSYFIDTDLNQLKEVFSGIKNSNEQTPEEMASLIADLEYRYSWDCSPLSMFRRHTV 751
Query: 474 YF--YHSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNLA-NATHVVVLSVLGYDVNF 530
Y Y LS E G L LE+ FHG KV + LA +HV++ +F
Sbjct: 752 YLDSYAVINDLSTKNE---GTRLAIKALELRFHGAKVVSCLAEGVSHVIIGEDHSRVADF 808
Query: 531 NSLTESFTAREKHLLWNKKLHVVRSQWLEDCLAKEQKSEEYEY 573
+ +F +K +++ W+ D + K + EE +Y
Sbjct: 809 KAFRRTF---------KRKFKILKESWVTDSIDKCELQEENQY 842
>gi|332242088|ref|XP_003270216.1| PREDICTED: DNA ligase 4 isoform 1 [Nomascus leucogenys]
gi|332242090|ref|XP_003270217.1| PREDICTED: DNA ligase 4 isoform 2 [Nomascus leucogenys]
gi|332242092|ref|XP_003270218.1| PREDICTED: DNA ligase 4 isoform 3 [Nomascus leucogenys]
gi|332242094|ref|XP_003270219.1| PREDICTED: DNA ligase 4 isoform 4 [Nomascus leucogenys]
Length = 911
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 155/523 (29%), Positives = 262/523 (50%), Gaps = 34/523 (6%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLII 122
AH +EV E I+ R+EGI++K S ++P R WLK+KPEY+ D LD+LI+
Sbjct: 408 AHTKNEVIDALNEAIDKREEGIMIKQPLSIYKPDKRGEGWLKIKPEYVSGLIDELDILIV 467
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
GGY+G G RGG ++ FL A+AE+P P P F + RVG+G + +EL + KL Y++
Sbjct: 468 GGYWGKGSRGGMMSHFLCAVAEKPPPGEKPSVFHTLSRVGSGYTMKELYDLGLKLAKYWK 527
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
+ K+APPS E+P+V+IE P S+I+ I + + S+++ +LRFPR
Sbjct: 528 PFH--KKAPPSSILC---GTEKPEVYIE-PCNSVIVQIKA-AEIVPSDMYKTGCTLRFPR 580
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSI 302
I+++R DK WH+C+ + +L ++G Y G DD+P++ + + K V
Sbjct: 581 IEKIRDDKEWHECMTLDDLEQLRGKASGKLASKHLYVG-GDDEPQEKKRKAAPKMKKVIG 639
Query: 303 VPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMNLNNSVTH 362
+ H +++++ ++IF D+ F ++ + L + E GG N T+
Sbjct: 640 IIEHLKAPNLTNVNKISNIFEDVEFCVMSGTDSQPKPDLENRIAEFGGYIVQNPGPD-TY 698
Query: 363 CVAADNKGLKYE--AAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEV 420
CV A +K ++ + + DV+ +W+L+C K + QP++ +H+ S+K+ E
Sbjct: 699 CVIAGSKNIRVKNIIVSNKHDVVKPAWLLECFKTKSFVPWQPRFMIHMCPSTKEHFAREY 758
Query: 421 DEFSDLYFWDLDLADIKQLLSNVDRS--EDPKTIDYYKKKYCPQDKWSCF-------HGC 471
D + D YF + DL ++K++ S + S + P+ + + W C H
Sbjct: 759 DCYGDSYFVNTDLNELKEVFSGIKNSNEQTPEEMTSLIADLECRYSWDCCPLSMFRRHTV 818
Query: 472 CIYFYHSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNLA-NATHVVVLSVLGYDVNF 530
+ Y LS E G L LE+ FHG KV + LA +HV+V +F
Sbjct: 819 YLDLYAVINDLSTKNE---GTRLAVKALELRFHGAKVVSCLAEGVSHVIVGEDHSRVADF 875
Query: 531 NSLTESFTAREKHLLWNKKLHVVRSQWLEDCLAKEQKSEEYEY 573
+ +F +K +++ W+ D + K + EE +Y
Sbjct: 876 KAFRRTF---------KRKFKILKESWVTDSIDKCELQEENQY 909
>gi|395833277|ref|XP_003789666.1| PREDICTED: DNA ligase 4 [Otolemur garnettii]
Length = 912
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 159/523 (30%), Positives = 269/523 (51%), Gaps = 34/523 (6%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLII 122
AH+ +EV E I+ R+EG+++K S ++P R WLK+KPEY+ D LD+LI+
Sbjct: 409 AHSKNEVIDALNEAIDKREEGVMIKHPLSIYKPDKRGEGWLKIKPEYVSGLMDELDILIV 468
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
GGY+G G RGG ++ FL A+AE+P P P F + RVG+G + +EL + KL +++
Sbjct: 469 GGYWGKGSRGGMMSHFLCAVAEKPPPGEKPSVFHTLSRVGSGYTMKELYDLGLKLAKHWK 528
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
+ K+APPS E+P+V+IE P S+I+ + + + S+++ +LRFPR
Sbjct: 529 PFN--KKAPPSSILC---GTEKPEVYIE-PCNSVIVQVKA-AEIVPSDMYKTGCTLRFPR 581
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSI 302
I+++R DK WH+C+ + +L ++G + G+ DD+P++ + + K V
Sbjct: 582 IEKIRDDKEWHECMTLDDLEQLRGKASGKLASKHFFVGI-DDEPQEKKRKAAPKIKKVIG 640
Query: 303 VPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMNLNNSVTH 362
V H ++S+I +++F D+ F +N ++ L + E GG N T+
Sbjct: 641 VIEHLKAPNLSNINKVSNVFEDVEFCVMNGTASHPKPDLENRIAEFGGYIVQNPGPD-TY 699
Query: 363 CVAADNKGLKYE--AAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEV 420
CV A ++ ++ + + DV+ +W+L+C K + QP++ +H+ S+K+ E
Sbjct: 700 CVIAGSENIRVKNIISSNEHDVVKPAWLLECFKTKTCVPWQPRFMIHMCPSTKEHFAREY 759
Query: 421 DEFSDLYFWDLDLADIKQLLSNVDRS--EDPKTIDYYKKKYCPQDKW-----SCFHGCCI 473
D + D YF D DL +K++ S + S + PK + + W S F I
Sbjct: 760 DCYGDSYFVDTDLNQLKEVFSGIRSSNKQTPKEMASVIADLEYRYSWDHSPLSLFRRHTI 819
Query: 474 Y--FYHSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNLA-NATHVVVLSVLGYDVNF 530
Y Y LS E G L LE+ FHG KV + LA +HV++ G D
Sbjct: 820 YLDLYTVINDLSTRTE---GTRLAIKALELRFHGAKVVSCLAEGVSHVII----GED--- 869
Query: 531 NSLTESFTAREKHLLWNKKLHVVRSQWLEDCLAKEQKSEEYEY 573
+S +F A + + +K +++ W+ D + K + EE +Y
Sbjct: 870 HSRVANFKAFRRKM--KRKFKILKEDWVTDSIDKHELQEENQY 910
>gi|332242096|ref|XP_003270220.1| PREDICTED: DNA ligase 4 isoform 5 [Nomascus leucogenys]
Length = 844
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 155/525 (29%), Positives = 263/525 (50%), Gaps = 34/525 (6%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLII 122
AH +EV E I+ R+EGI++K S ++P R WLK+KPEY+ D LD+LI+
Sbjct: 341 AHTKNEVIDALNEAIDKREEGIMIKQPLSIYKPDKRGEGWLKIKPEYVSGLIDELDILIV 400
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
GGY+G G RGG ++ FL A+AE+P P P F + RVG+G + +EL + KL Y++
Sbjct: 401 GGYWGKGSRGGMMSHFLCAVAEKPPPGEKPSVFHTLSRVGSGYTMKELYDLGLKLAKYWK 460
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
+ K+APPS E+P+V+IE P S+I+ I + + S+++ +LRFPR
Sbjct: 461 PFH--KKAPPSSILC---GTEKPEVYIE-PCNSVIVQIKA-AEIVPSDMYKTGCTLRFPR 513
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSI 302
I+++R DK WH+C+ + +L ++G Y G DD+P++ + + K V
Sbjct: 514 IEKIRDDKEWHECMTLDDLEQLRGKASGKLASKHLYVG-GDDEPQEKKRKAAPKMKKVIG 572
Query: 303 VPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMNLNNSVTH 362
+ H +++++ ++IF D+ F ++ + L + E GG N T+
Sbjct: 573 IIEHLKAPNLTNVNKISNIFEDVEFCVMSGTDSQPKPDLENRIAEFGGYIVQNPGPD-TY 631
Query: 363 CVAADNKGLKYE--AAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEV 420
CV A +K ++ + + DV+ +W+L+C K + QP++ +H+ S+K+ E
Sbjct: 632 CVIAGSKNIRVKNIIVSNKHDVVKPAWLLECFKTKSFVPWQPRFMIHMCPSTKEHFAREY 691
Query: 421 DEFSDLYFWDLDLADIKQLLSNVDRSED--PKTIDYYKKKYCPQDKWSCF-------HGC 471
D + D YF + DL ++K++ S + S + P+ + + W C H
Sbjct: 692 DCYGDSYFVNTDLNELKEVFSGIKNSNEQTPEEMTSLIADLECRYSWDCCPLSMFRRHTV 751
Query: 472 CIYFYHSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNLA-NATHVVVLSVLGYDVNF 530
+ Y LS E G L LE+ FHG KV + LA +HV+V +F
Sbjct: 752 YLDLYAVINDLSTKNE---GTRLAVKALELRFHGAKVVSCLAEGVSHVIVGEDHSRVADF 808
Query: 531 NSLTESFTAREKHLLWNKKLHVVRSQWLEDCLAKEQKSEEYEYSL 575
+ +F +K +++ W+ D + K + EE +Y +
Sbjct: 809 KAFRRTF---------KRKFKILKESWVTDSIDKCELQEENQYLI 844
>gi|291393221|ref|XP_002713071.1| PREDICTED: DNA ligase (ATP) 4-like [Oryctolagus cuniculus]
Length = 911
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 158/524 (30%), Positives = 267/524 (50%), Gaps = 34/524 (6%)
Query: 63 VAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLI 121
+AH +EV E I+ R+EGI++K S ++P R WLK+KPEY+ D LD+LI
Sbjct: 407 LAHTKNEVIDALNEAIDKREEGIMIKHPLSIYKPDKRGEGWLKIKPEYVSGLMDELDILI 466
Query: 122 IGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYF 181
+GGY+G G RGG ++ FL A+AERP P P F + CRVG+G + +EL + KL ++
Sbjct: 467 VGGYWGKGLRGGMMSHFLCAVAERPPPGEKPSVFHTLCRVGSGYTMKELYDLGLKLAKHW 526
Query: 182 RKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFP 241
+ + ++APP E+P+V+IE P S+I+ + + + S ++ +LRFP
Sbjct: 527 KPFH--RKAPPGSILC---GTEKPEVYIE-PRNSVIVQVKA-AEIVPSTMYKTGCTLRFP 579
Query: 242 RIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVS 301
RI+++R DK WH+C+ + +L ++G G DD+P++ + + K V
Sbjct: 580 RIEKIRDDKEWHECMTLDDLEQLRGRASGKLASKHLCVG-ADDEPREKKRKAAPKMKKVI 638
Query: 302 IVPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMNLNNSVT 361
+ H ++S+I ++IF D+ F ++ ++ L + E GG N T
Sbjct: 639 GIIEHLKAPNLSNINKVSNIFEDVEFCVMSGTDSHPKPDLENRIAELGGYIVQNPGPD-T 697
Query: 362 HCVAADNKGLKYE--AAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEE 419
+CV A ++ ++ + + + DV+ +W+L+C K + QP++ +H+ S+KK E
Sbjct: 698 YCVIAGSENIRVKNIISSDKHDVVKPAWLLECFKTKSCVPWQPRFMIHMCPSTKKHFALE 757
Query: 420 VDEFSDLYFWDLDLADIKQLLSNVDRSED------PKTIDYYKKKYC-PQDKWSCFHGCC 472
D + D YF D DL +K++ S + S++ I + +Y Q S F
Sbjct: 758 YDCYGDSYFVDTDLNQLKEVFSGIKNSDEQTPEEMASVIADLEFRYSWDQSPLSMFRHHT 817
Query: 473 IY--FYHSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNLA-NATHVVVLSVLGYDVN 529
+Y Y LS E G L L++ FHG K+ + LA +HV++ G D
Sbjct: 818 VYLDLYAVINDLSTKIE---GTGLATKALQLRFHGAKLVSCLAEGVSHVII----GDD-- 868
Query: 530 FNSLTESFTAREKHLLWNKKLHVVRSQWLEDCLAKEQKSEEYEY 573
+S F A + L +K +++ W+ D + K + EE +Y
Sbjct: 869 -HSRVPDFKAFRRTL--KRKFKILQEDWVTDSIDKSELQEENQY 909
>gi|126337295|ref|XP_001365353.1| PREDICTED: DNA ligase 4 [Monodelphis domestica]
Length = 911
Score = 231 bits (588), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 162/528 (30%), Positives = 266/528 (50%), Gaps = 40/528 (7%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLII 122
A+ EV E I+ R+EGI++K+ S ++P R WLK+KPEYI D LD+LI+
Sbjct: 408 ANTKKEVIDALNEAIDKREEGIMIKNPLSIYKPDKRGEGWLKIKPEYINELMDELDILIV 467
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
GGY+G G RGG ++ FL A+AE P P P F + CRVG+G + +EL + KL +++
Sbjct: 468 GGYWGKGLRGGMMSHFLCAVAETPPPGEKPSVFYTLCRVGSGYTMKELYDLGLKLSKHWK 527
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
+ KRAPP+ E+P+V+IE P S+I+ + + + S+++ +LRFPR
Sbjct: 528 PFH--KRAPPNSILC---GTEKPEVYIE-PCNSVIVQVKA-AEIVSSDMYKTNCTLRFPR 580
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSI 302
I+++R DK W+ C+ + L ++G + G D++P+ + KK + I
Sbjct: 581 IEKIREDKEWYKCMTLDELENLRGKASGKLASKHLFIGGDDEEPQGKKRKAIKVKKTIGI 640
Query: 303 VPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMNLNNSVTH 362
+ H D+S+I +++F D+ F + ++S L + E GG N T+
Sbjct: 641 I-EHLKAPDLSNINRISNVFEDVEFCVMTGTDSHSKPDLESHIAELGGYIVQNPGPD-TY 698
Query: 363 CVAADNKGLKYE--AAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEV 420
CV A + ++ + + DV+ W+L+C K+ + QP++ +H+ S+K+ E
Sbjct: 699 CVIAGTENVRVRNIISSNKHDVVKPEWLLECFKAKECVPWQPQFMIHMCPSTKEHFACEY 758
Query: 421 DEFSDLYFWDLDLADIKQLLSNVD--RSEDPKTI--------DYYKKKYCPQDKWSCFHG 470
D + D YF D D+ +K++ S + + E P + D Y CP S F
Sbjct: 759 DCYGDSYFADTDVVQLKEVFSRIKNVKEESPNEMASVIADLEDRYSWDNCP---LSMFRH 815
Query: 471 CCIY--FYHSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNL-ANATHVVVLSVLGYD 527
C +Y Y L+ E G L LE+ FHG KV + L +HV++ G D
Sbjct: 816 CTMYVDIYAIINDLTTQIE---GTRLAIKALELRFHGAKVVSCLEEGVSHVII----GED 868
Query: 528 VNFNSLTESFTAREKHLLWNKKLHVVRSQWLEDCLAKEQKSEEYEYSL 575
+S E F A + L +K +++ W+ D L K + EE +Y +
Sbjct: 869 ---HSRVEEFKAFRRTL--KRKYKILQELWVTDSLKKGELQEENQYLI 911
>gi|197101141|ref|NP_001126522.1| DNA ligase 4 [Pongo abelii]
gi|75041273|sp|Q5R6L3.1|DNLI4_PONAB RecName: Full=DNA ligase 4; AltName: Full=DNA ligase IV; AltName:
Full=Polydeoxyribonucleotide synthase [ATP] 4
gi|55731786|emb|CAH92597.1| hypothetical protein [Pongo abelii]
Length = 911
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 156/523 (29%), Positives = 261/523 (49%), Gaps = 34/523 (6%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLII 122
AH +EV E I+ R+EGI++K S ++P R WLK+KPEY+ D LD+LI+
Sbjct: 408 AHTKNEVIDALNEAIDKREEGIMIKQPLSIYKPDKRGEGWLKIKPEYVSGLMDELDILIV 467
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
GGY+G G RGG ++ FL A+AE+P P P F + RVG+G + +EL + KL Y++
Sbjct: 468 GGYWGKGSRGGMMSHFLCAVAEKPPPGEKPSVFHTLSRVGSGCTMKELYDLGLKLAKYWK 527
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
+ K+APPS E+P+V+IE P S+I+ I + + S+++ +LRFPR
Sbjct: 528 PFH--KKAPPSSILC---GTEKPEVYIE-PCNSVIVQIKA-AEIVPSDMYKTGCTLRFPR 580
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSI 302
I+++R DK WH+C+ + +L ++G Y G DD+P++ + + K V
Sbjct: 581 IEKIRDDKEWHECMTLDDLEQLRGKASGKLASKHFYVG-GDDEPQEKKRKAAPKMKKVIG 639
Query: 303 VPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMNLNNSVTH 362
+ H +++++ ++IF D+ F ++ + L + E GG N T+
Sbjct: 640 IIEHLKAPNLTNVNKISNIFEDVEFCVMSGTDSQPKPDLENRIAEFGGYIVQNPGPD-TY 698
Query: 363 CVAADNKGLKYE--AAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEV 420
CV A +K ++ + + DV+ +W+L+C K + QP + +H+ S+K+ E
Sbjct: 699 CVIAGSKNIRVKNIILSNKHDVVKPAWLLECFKTKSFVPWQPHFMIHMCPSTKEHFAREY 758
Query: 421 DEFSDLYFWDLDLADIKQLLSNVDRS--EDPKTIDYYKKKYCPQDKWSC-----FHGCCI 473
D + D YF D DL +K++ S + S + P+ + + W C F +
Sbjct: 759 DCYGDSYFVDTDLNQLKEVFSGIKNSNEQTPEEMASLIADLEYRYSWDCSPLSMFRRHTV 818
Query: 474 Y--FYHSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNLA-NATHVVVLSVLGYDVNF 530
Y Y LS E G L LE+ FHG KV + LA +HV++ +F
Sbjct: 819 YLDLYAVINDLSTKNE---GTRLAIKALELRFHGAKVVSCLAEGVSHVIIGEDHSRIADF 875
Query: 531 NSLTESFTAREKHLLWNKKLHVVRSQWLEDCLAKEQKSEEYEY 573
+ +F +K +++ W+ D + K + EE +Y
Sbjct: 876 KAFRRTF---------KRKFKILKESWITDSIDKCELQEENQY 909
>gi|426375938|ref|XP_004054771.1| PREDICTED: DNA ligase 4 isoform 1 [Gorilla gorilla gorilla]
gi|426375940|ref|XP_004054772.1| PREDICTED: DNA ligase 4 isoform 2 [Gorilla gorilla gorilla]
gi|426375942|ref|XP_004054773.1| PREDICTED: DNA ligase 4 isoform 3 [Gorilla gorilla gorilla]
Length = 911
Score = 230 bits (586), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 155/523 (29%), Positives = 262/523 (50%), Gaps = 34/523 (6%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLII 122
AH +EV E I+ R+EGI++K S ++P R WLK+KPEY+ D LD+LI+
Sbjct: 408 AHTKNEVIDALNEAIDKREEGIMVKQPLSIYKPDKRGEGWLKIKPEYVSGLMDELDILIV 467
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
GGY+G G RGG ++ FL A+AE+P P P F + RVG+G + +EL + KL Y++
Sbjct: 468 GGYWGKGSRGGMMSHFLCAVAEKPPPGEKPSVFHTLSRVGSGCTMKELYDLGLKLAKYWK 527
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
+ ++APPS E+P+V+IE P S+I+ I + + S+++ +LRFPR
Sbjct: 528 PFH--RKAPPSSILC---GTEKPEVYIE-PCNSVIVQIKA-AEIVPSDMYKTGCTLRFPR 580
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSI 302
I+++R DK WH+C+ + +L ++G Y G DD+P++ + + K V
Sbjct: 581 IEKIRDDKEWHECMTLDDLEQLRGKASGKLASKHLYIG-GDDEPQEKKRKAAPKMKKVIG 639
Query: 303 VPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMNLNNSVTH 362
+ H +++++ ++IF D+ F ++ + L + E GG N T+
Sbjct: 640 IIEHLKAPNLTNVNKISNIFEDVEFCVMSGTDSQPKPDLENRIAEFGGYIVQNPGPD-TY 698
Query: 363 CVAADNKGLKYE--AAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEV 420
CV A +K ++ + + DV+ +W+L+C K + QP++ +H+ S+K+ E
Sbjct: 699 CVIAGSKNIRVKNIILSNKHDVVKPAWLLECFKTKSFVPWQPRFMIHMCPSTKEHFAREY 758
Query: 421 DEFSDLYFWDLDLADIKQLLSNVDRSED--PKTIDYYKKKYCPQDKWSC-----FHGCCI 473
D + D YF D DL +K++ S + S + P+ + + W C F +
Sbjct: 759 DCYGDSYFIDTDLNQLKEVFSGIKNSNEQTPEEMASLIADLEYRYSWDCSPLSMFRRHTV 818
Query: 474 YF--YHSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNLA-NATHVVVLSVLGYDVNF 530
Y Y LS E G L LE+ FHG KV + LA +HV++ +F
Sbjct: 819 YLDSYAVINDLSTKNE---GTRLAIKALELRFHGAKVVSCLAEGVSHVIIGEDHSRVADF 875
Query: 531 NSLTESFTAREKHLLWNKKLHVVRSQWLEDCLAKEQKSEEYEY 573
+ +F +K +++ W+ D + K + EE +Y
Sbjct: 876 KAFRRTF---------KRKFKILKESWVTDSIDKCELQEENQY 909
>gi|426375944|ref|XP_004054774.1| PREDICTED: DNA ligase 4 isoform 4 [Gorilla gorilla gorilla]
Length = 844
Score = 229 bits (585), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 155/523 (29%), Positives = 262/523 (50%), Gaps = 34/523 (6%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLII 122
AH +EV E I+ R+EGI++K S ++P R WLK+KPEY+ D LD+LI+
Sbjct: 341 AHTKNEVIDALNEAIDKREEGIMVKQPLSIYKPDKRGEGWLKIKPEYVSGLMDELDILIV 400
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
GGY+G G RGG ++ FL A+AE+P P P F + RVG+G + +EL + KL Y++
Sbjct: 401 GGYWGKGSRGGMMSHFLCAVAEKPPPGEKPSVFHTLSRVGSGCTMKELYDLGLKLAKYWK 460
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
+ ++APPS E+P+V+IE P S+I+ I + + S+++ +LRFPR
Sbjct: 461 PFH--RKAPPSSILC---GTEKPEVYIE-PCNSVIVQIKA-AEIVPSDMYKTGCTLRFPR 513
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSI 302
I+++R DK WH+C+ + +L ++G Y G DD+P++ + + K V
Sbjct: 514 IEKIRDDKEWHECMTLDDLEQLRGKASGKLASKHLYIG-GDDEPQEKKRKAAPKMKKVIG 572
Query: 303 VPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMNLNNSVTH 362
+ H +++++ ++IF D+ F ++ + L + E GG N T+
Sbjct: 573 IIEHLKAPNLTNVNKISNIFEDVEFCVMSGTDSQPKPDLENRIAEFGGYIVQNPGPD-TY 631
Query: 363 CVAADNKGLKYE--AAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEV 420
CV A +K ++ + + DV+ +W+L+C K + QP++ +H+ S+K+ E
Sbjct: 632 CVIAGSKNIRVKNIILSNKHDVVKPAWLLECFKTKSFVPWQPRFMIHMCPSTKEHFAREY 691
Query: 421 DEFSDLYFWDLDLADIKQLLSNVDRS--EDPKTIDYYKKKYCPQDKWSC-----FHGCCI 473
D + D YF D DL +K++ S + S + P+ + + W C F +
Sbjct: 692 DCYGDSYFIDTDLNQLKEVFSGIKNSNEQTPEEMASLIADLEYRYSWDCSPLSMFRRHTV 751
Query: 474 YF--YHSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNLA-NATHVVVLSVLGYDVNF 530
Y Y LS E G L LE+ FHG KV + LA +HV++ +F
Sbjct: 752 YLDSYAVINDLSTKNE---GTRLAIKALELRFHGAKVVSCLAEGVSHVIIGEDHSRVADF 808
Query: 531 NSLTESFTAREKHLLWNKKLHVVRSQWLEDCLAKEQKSEEYEY 573
+ +F +K +++ W+ D + K + EE +Y
Sbjct: 809 KAFRRTF---------KRKFKILKESWVTDSIDKCELQEENQY 842
>gi|444706089|gb|ELW47449.1| DNA ligase 4 [Tupaia chinensis]
Length = 844
Score = 229 bits (583), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 160/525 (30%), Positives = 264/525 (50%), Gaps = 34/525 (6%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLII 122
AH +EV E I+ R+EGI++K S ++P R WLK+KPEY+ D LD+LI+
Sbjct: 341 AHTKNEVIDALNEAIDKREEGIMIKHPLSIYKPDKRGEGWLKIKPEYVSGLMDELDILIV 400
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
GGY+G G RGG ++ FL A+AE P P P F + CRVG+G + +EL + KL +++
Sbjct: 401 GGYWGKGSRGGMMSHFLCAVAENPPPGEKPSVFHTLCRVGSGYTMKELYDLGLKLAKHWK 460
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
+ K++PPS E+P+V+IE P S+I+ I + + S+++ +LRFPR
Sbjct: 461 PFH--KKSPPSSILC---GTEKPEVYIE-PCNSVIVQIKA-AEIVPSDMYKTGCTLRFPR 513
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSI 302
I+R+R DK WH+C+ + +L ++G + G DD+P++ + + + V
Sbjct: 514 IERIRDDKVWHECMTLGDLEQLRGKASGKLASKHYFLG-GDDEPREKKRRTAPKTRKVIG 572
Query: 303 VPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMNLNNSVTH 362
+ H ++S+I + IF D+ F +N ++ L + E GG N T+
Sbjct: 573 IIQHLKAPNLSNINKVSDIFEDVEFCVMNGLDSHPKSDLENRIAEFGGYIVQNPGPD-TY 631
Query: 363 CVAA--DNKGLKYEAAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEV 420
CV A +N +K + + DV+ W+L C K + QP++ +H+ S+K+ +
Sbjct: 632 CVIAGSENVRVKNIISSNKHDVVKPEWLLQCFETKSCVPWQPRFMIHMCPSTKQHFAHQY 691
Query: 421 DEFSDLYFWDLDLADIKQLLSNVDRSED--PKTI-----DYYKKKYCPQDKWSCFHGCCI 473
D + D YF D DL +K++ S + SE+ P+ + D + S F I
Sbjct: 692 DCYGDSYFVDTDLNQLKEVFSGIKHSEEQTPENMASVIADLEYRYVWDHSPLSMFRHHTI 751
Query: 474 Y--FYHSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNLA-NATHVVVLSVLGYDVNF 530
Y Y LS + G L LE+ FHG K+ LA +HV++ G D
Sbjct: 752 YVDLYTVINDLSTK---IKGTRLIIKALELRFHGAKIVPCLAEGVSHVII----GAD--- 801
Query: 531 NSLTESFTAREKHLLWNKKLHVVRSQWLEDCLAKEQKSEEYEYSL 575
++ F A + L +K +++ W+ D + K + EE +Y +
Sbjct: 802 HTRVADFKAFRRTL--KRKFKILQEDWVTDSIDKCELQEENQYLI 844
>gi|355701094|gb|EHH29115.1| DNA ligase 4 [Macaca mulatta]
gi|380789413|gb|AFE66582.1| DNA ligase 4 [Macaca mulatta]
gi|383410121|gb|AFH28274.1| DNA ligase 4 [Macaca mulatta]
Length = 911
Score = 228 bits (582), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 157/527 (29%), Positives = 261/527 (49%), Gaps = 42/527 (7%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLII 122
AH +EV E I+ R+EGI++K S ++P R WLK+KPEY+ D LD+LI+
Sbjct: 408 AHTKNEVIDALNEAIDKREEGIMIKQPLSIYKPDKRGEGWLKIKPEYVTGLMDELDILIV 467
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
GGY+G G RGG ++ FL A+AE+P P P F + RVG+G + +EL + KL Y++
Sbjct: 468 GGYWGKGSRGGMMSHFLCAVAEKPPPGEKPSVFHTLSRVGSGCTMKELYDLGLKLAKYWK 527
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
+ K+APPS E+P+V+IE P S+I+ I + + S+++ +LRFPR
Sbjct: 528 PFH--KKAPPSSILC---GTEKPEVYIE-PCNSVIVQIKA-AEIVPSDMYKTGCTLRFPR 580
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSI 302
I+++R DK WH+C+ + +L ++G Y G DD P++ + + K V
Sbjct: 581 IEKIREDKEWHECMTLDDLEQLRGKASGKLASKHLYVG-GDDGPQEKKRKAAPKMKKVIG 639
Query: 303 VPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMNLNNSVTH 362
+ H +++++ ++IF D+ F ++ + L + E GG N T+
Sbjct: 640 IIEHLKAPNLTNVNKISNIFEDVEFCVMSGTDSQPKPDLENRIAELGGYIVQNPGPD-TY 698
Query: 363 CVAADNKGLKYE--AAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEV 420
CV A +K ++ + + DV+ +W+L+C K + QP++ +H+ S+K+ E
Sbjct: 699 CVIAGSKNIRVKNIILSNKHDVVKPAWLLECFKTKSFVPWQPRFMIHMCPSTKEHFAREY 758
Query: 421 DEFSDLYFWDLDLADIKQLLSNVDRS------EDPKTIDYYKKKYCPQDKWSC-----FH 469
D + D YF D DL +K++ S + S E I + +Y W C F
Sbjct: 759 DCYGDSYFVDTDLNQLKEVFSGIKNSYEQTSEEMASLIADLEYRY----SWDCSPLSMFR 814
Query: 470 GCCIY--FYHSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNLA-NATHVVVLSVLGY 526
+Y Y LS E G L LE+ FHG KV + LA +HV++
Sbjct: 815 RHTVYLDLYVVINDLSTKTE---GTRLAIKALELRFHGAKVVSCLAEGVSHVIIGEDHSR 871
Query: 527 DVNFNSLTESFTAREKHLLWNKKLHVVRSQWLEDCLAKEQKSEEYEY 573
+F + +F +K +++ W+ D + + + EE +Y
Sbjct: 872 VADFKAFRRTF---------KRKFKILKESWVTDSIDRCELQEENQY 909
>gi|403272943|ref|XP_003928292.1| PREDICTED: DNA ligase 4 isoform 1 [Saimiri boliviensis boliviensis]
gi|403272945|ref|XP_003928293.1| PREDICTED: DNA ligase 4 isoform 2 [Saimiri boliviensis boliviensis]
Length = 911
Score = 228 bits (582), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 158/525 (30%), Positives = 260/525 (49%), Gaps = 34/525 (6%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLII 122
AH DEV E I+ R+EGI++K S ++P R WLK+KPEY+ D LD++I+
Sbjct: 408 AHTKDEVIDALNEAIDKREEGIMIKYPLSIYKPDKRGEGWLKIKPEYVSGLMDELDIIIV 467
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
GGY+G G RGG ++ FL A+AE+P P P F + RVG+G + +EL + KL Y+R
Sbjct: 468 GGYWGKGSRGGMMSHFLCAVAEKPPPGKKPSVFHTLSRVGSGYTMKELYDLGLKLAKYWR 527
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
+ K+ PPS E+P+V+IE P S+I+ I + + S+++ +LRFPR
Sbjct: 528 PFH--KKTPPSSILC---GSEKPEVYIE-PCNSVIVQIKA-AEIVPSDMYKTGCTLRFPR 580
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSI 302
I+++R DK WH+C+ + +L + G Y G D P++ R + KK + I
Sbjct: 581 IEKIRDDKEWHECMTLDDLEQLRGKACGKLASKHLYIGGDDGPPEKKRKAPPKIKKVIGI 640
Query: 303 VPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMNLNNSVTH 362
+ H +++++ ++IF D+ F ++ + L + E GG N T+
Sbjct: 641 I-EHLKAPNLTNVNKISNIFEDVEFCVMSGTDSQPKPDLENRIAEFGGYIVQNPGPD-TY 698
Query: 363 CVAADNKGLKYE--AAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEV 420
CV A ++ ++ + + DV+ +W+L+C K + QP + +H+ S+K+ E
Sbjct: 699 CVIAGSENIRVKNIILSDKHDVVKPAWLLECFKTKSFVPWQPCFMIHMCPSTKEHFAREY 758
Query: 421 DEFSDLYFWDLDLADIKQLLSNVDRS------EDPKTIDYYKKKYC-PQDKWSCFHGCCI 473
D + D YF D DL +K++ S + S E I + +Y + S F I
Sbjct: 759 DCYGDSYFVDTDLNQLKEVFSGIKNSNEQTPEEMASVIADLEHRYSWDRSPLSIFRRHTI 818
Query: 474 Y--FYHSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNLA-NATHVVVLSVLGYDVNF 530
Y Y LS E G L LE+ FHGG V + LA +HV++ +F
Sbjct: 819 YLDLYAVINDLSTKTE---GTRLAVKALELRFHGGTVVSCLAEGVSHVIIGEDHSRVADF 875
Query: 531 NSLTESFTAREKHLLWNKKLHVVRSQWLEDCLAKEQKSEEYEYSL 575
+ +F +K +++ W+ D + K + EE +Y +
Sbjct: 876 KAFRRTF---------KRKFKILKDSWITDSIDKYELQEESQYLI 911
>gi|860937|emb|CAA58467.1| DNA ligase IV [Homo sapiens]
Length = 844
Score = 228 bits (582), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 154/523 (29%), Positives = 262/523 (50%), Gaps = 34/523 (6%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLII 122
AH +EV E I+ R+EGI++K S ++P R WLK+KPEY+ D LD+LI+
Sbjct: 341 AHTKNEVIDALNEAIDKREEGIMVKQPLSIYKPDKRGEGWLKIKPEYVSGLMDELDILIV 400
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
GGY+G G RGG ++ FL A+AE+P P P F + RVG+G + +EL + KL Y++
Sbjct: 401 GGYWGKGSRGGMMSHFLCAVAEKPPPGEKPSVFHTLSRVGSGCTMKELYDLGLKLAKYWK 460
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
+ ++APPS E+P+V+IE P S+I+ I + + S+++ +LRFPR
Sbjct: 461 PFH--RKAPPSSILC---GTEKPEVYIE-PCNSVIVQIKA-AEIVPSDMYKTGCTLRFPR 513
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSI 302
I+++R DK WH+C+ + +L ++G Y G DD+P++ + + K V
Sbjct: 514 IEKIRDDKEWHECMTLDDLEQLRGKASGKLASKHLYIG-GDDEPQEKKRKAAPKMKKVIG 572
Query: 303 VPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMNLNNSVTH 362
+ H +++++ ++IF D+ F ++ + L + E GG N T+
Sbjct: 573 IIEHLKAPNLTNVNKISNIFEDVEFCVMSGTDSQPKPDLENRIAEFGGYIVQNPGPD-TY 631
Query: 363 CVAADNKGLKYE--AAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEV 420
CV A ++ ++ + + DV+ +W+L+C K + QP++ +H+ S+K+ E
Sbjct: 632 CVIAGSENIRVKNIILSNKHDVVKPAWLLECFKTKSFVPWQPRFMIHMCPSTKEHFAREY 691
Query: 421 DEFSDLYFWDLDLADIKQLLSNVDRS--EDPKTIDYYKKKYCPQDKWSC-----FHGCCI 473
D + D YF D DL +K++ S + S + P+ + + W C F +
Sbjct: 692 DCYGDSYFIDTDLNQLKEVFSGIKNSNEQTPEEMASLIADLEYRYSWDCSPLSMFRRHTV 751
Query: 474 YF--YHSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNLA-NATHVVVLSVLGYDVNF 530
Y Y LS E G L LE+ FHG KV + LA +HV++ +F
Sbjct: 752 YLDSYAVINDLSTKNE---GTRLAIKALELRFHGAKVVSCLAEGVSHVIIGEDHSRVADF 808
Query: 531 NSLTESFTAREKHLLWNKKLHVVRSQWLEDCLAKEQKSEEYEY 573
+ +F +K +++ W+ D + K + EE +Y
Sbjct: 809 KAFRRTF---------KRKFKILKESWVTDSIDKCELQEENQY 842
>gi|355754801|gb|EHH58702.1| DNA ligase 4 [Macaca fascicularis]
Length = 911
Score = 228 bits (582), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 157/527 (29%), Positives = 261/527 (49%), Gaps = 42/527 (7%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLII 122
AH +EV E I+ R+EGI++K S ++P R WLK+KPEY+ D LD+LI+
Sbjct: 408 AHTKNEVIDALNEAIDKREEGIMIKQPLSIYKPDKRGEGWLKIKPEYVTGLMDELDILIV 467
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
GGY+G G RGG ++ FL A+AE+P P P F + RVG+G + +EL + KL Y++
Sbjct: 468 GGYWGKGSRGGMMSHFLCAVAEKPPPGEKPSVFHTLSRVGSGCTMKELYDLGLKLAKYWK 527
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
+ K+APPS E+P+V+IE P S+I+ I + + S+++ +LRFPR
Sbjct: 528 PFH--KKAPPSSILC---GTEKPEVYIE-PCNSVIVQIKA-AEIVPSDMYKTGCTLRFPR 580
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSI 302
I+++R DK WH+C+ + +L ++G Y G DD P++ + + K V
Sbjct: 581 IEKIREDKEWHECMTLDDLEQLRGKASGKLASKHLYVG-GDDGPQEKKRKAAPKMKKVIG 639
Query: 303 VPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMNLNNSVTH 362
+ H +++++ ++IF D+ F ++ + L + E GG N T+
Sbjct: 640 IIEHLKAPNLTNVNKISNIFEDVEFCVMSGTDSQPKPDLENRIAELGGYIVQNPGPD-TY 698
Query: 363 CVAADNKGLKYE--AAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEV 420
CV A +K ++ + + DV+ +W+L+C K + QP++ +H+ S+K+ E
Sbjct: 699 CVIAGSKNIRVKNIILSNKHDVVKPAWLLECFKTKSFVPWQPRFMIHMCPSTKEHFAREY 758
Query: 421 DEFSDLYFWDLDLADIKQLLSNVDRS------EDPKTIDYYKKKYCPQDKWSC-----FH 469
D + D YF D DL +K++ S + S E I + +Y W C F
Sbjct: 759 DCYGDSYFVDTDLNQLKEVFSGIKNSYEQTSEEMASLIADLEYRY----SWDCSPLSMFR 814
Query: 470 GCCIY--FYHSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNLA-NATHVVVLSVLGY 526
+Y Y LS E G L LE+ FHG KV + LA +HV++
Sbjct: 815 RHTVYLDLYVVINDLSTKTE---GTRLAIKALELRFHGAKVVSCLAEGVSHVIIGEDHSR 871
Query: 527 DVNFNSLTESFTAREKHLLWNKKLHVVRSQWLEDCLAKEQKSEEYEY 573
+F + +F +K +++ W+ D + + + EE +Y
Sbjct: 872 VADFKAFRRTF---------KRKFKILKESWVTDSIDRCELQEENQY 909
>gi|189054575|dbj|BAG37361.1| unnamed protein product [Homo sapiens]
Length = 911
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 154/523 (29%), Positives = 262/523 (50%), Gaps = 34/523 (6%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLII 122
AH +EV E I+ R+EGI++K S ++P R WLK+KPEY+ D LD+LI+
Sbjct: 408 AHTKNEVIDALNEAIDKREEGIMVKQPLSIYKPDKRGEGWLKIKPEYVSGLMDELDILIV 467
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
GGY+G G RGG ++ FL A+AE+P P P F + RVG+G + +EL + KL Y++
Sbjct: 468 GGYWGKGSRGGMMSHFLCAVAEKPPPGEKPSVFHTLSRVGSGCTMKELYDLGLKLAKYWK 527
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
+ ++APPS E+P+V+IE P S+I+ I + + S+++ +LRFPR
Sbjct: 528 PFH--RKAPPSSILC---GTEKPEVYIE-PCNSVIVQIKA-AEIVPSDMYKTGCALRFPR 580
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSI 302
I+++R DK WH+C+ + +L ++G Y G DD+P++ + + K V
Sbjct: 581 IEKIRDDKEWHECMTLDDLEQLRGKASGKLASKHLYIG-GDDEPQEKKRKAAPKMKKVIG 639
Query: 303 VPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMNLNNSVTH 362
+ H +++++ ++IF D+ F ++ + L + E GG N T+
Sbjct: 640 IIEHLKAPNLTNVNKISNIFEDVEFCVMSGTDSQPKPDLENRIAEFGGYIVQNPGPD-TY 698
Query: 363 CVAADNKGLKYE--AAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEV 420
CV A ++ ++ + + DV+ +W+L+C K + QP++ +H+ S+K+ E
Sbjct: 699 CVIAGSENIRVKNIILSNKHDVVKPAWLLECFKTKSFVPWQPRFMIHMCPSTKEHFAREY 758
Query: 421 DEFSDLYFWDLDLADIKQLLSNVDRS--EDPKTIDYYKKKYCPQDKWSC-----FHGCCI 473
D + D YF D DL +K++ S + S + P+ + + W C F +
Sbjct: 759 DCYGDSYFIDTDLNQLKEVFSGIKNSNEQTPEEMASLIADLEYRYSWDCSPLSMFRRHTV 818
Query: 474 YF--YHSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNLA-NATHVVVLSVLGYDVNF 530
Y Y LS E G L LE+ FHG KV + LA +HV++ +F
Sbjct: 819 YLDSYAVINDLSTKNE---GTRLAIKALELRFHGAKVVSCLAEGVSHVIIGEDHSRVADF 875
Query: 531 NSLTESFTAREKHLLWNKKLHVVRSQWLEDCLAKEQKSEEYEY 573
+ +F +K +++ W+ D + K + EE +Y
Sbjct: 876 KAFRRTF---------KRKFKILKESWVTDSIDKCELQEENQY 909
>gi|23199993|ref|NP_002303.2| DNA ligase 4 [Homo sapiens]
gi|46255052|ref|NP_996820.1| DNA ligase 4 [Homo sapiens]
gi|148539894|ref|NP_001091738.1| DNA ligase 4 [Homo sapiens]
gi|88911290|sp|P49917.2|DNLI4_HUMAN RecName: Full=DNA ligase 4; AltName: Full=DNA ligase IV; AltName:
Full=Polydeoxyribonucleotide synthase [ATP] 4
gi|22766796|gb|AAH37491.1| Ligase IV, DNA, ATP-dependent [Homo sapiens]
gi|119629499|gb|EAX09094.1| ligase IV, DNA, ATP-dependent, isoform CRA_a [Homo sapiens]
gi|119629500|gb|EAX09095.1| ligase IV, DNA, ATP-dependent, isoform CRA_a [Homo sapiens]
gi|119629501|gb|EAX09096.1| ligase IV, DNA, ATP-dependent, isoform CRA_a [Homo sapiens]
gi|123983318|gb|ABM83400.1| ligase IV, DNA, ATP-dependent [synthetic construct]
gi|123998021|gb|ABM86612.1| ligase IV, DNA, ATP-dependent [synthetic construct]
Length = 911
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 154/523 (29%), Positives = 262/523 (50%), Gaps = 34/523 (6%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLII 122
AH +EV E I+ R+EGI++K S ++P R WLK+KPEY+ D LD+LI+
Sbjct: 408 AHTKNEVIDALNEAIDKREEGIMVKQPLSIYKPDKRGEGWLKIKPEYVSGLMDELDILIV 467
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
GGY+G G RGG ++ FL A+AE+P P P F + RVG+G + +EL + KL Y++
Sbjct: 468 GGYWGKGSRGGMMSHFLCAVAEKPPPGEKPSVFHTLSRVGSGCTMKELYDLGLKLAKYWK 527
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
+ ++APPS E+P+V+IE P S+I+ I + + S+++ +LRFPR
Sbjct: 528 PFH--RKAPPSSILC---GTEKPEVYIE-PCNSVIVQIKA-AEIVPSDMYKTGCTLRFPR 580
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSI 302
I+++R DK WH+C+ + +L ++G Y G DD+P++ + + K V
Sbjct: 581 IEKIRDDKEWHECMTLDDLEQLRGKASGKLASKHLYIG-GDDEPQEKKRKAAPKMKKVIG 639
Query: 303 VPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMNLNNSVTH 362
+ H +++++ ++IF D+ F ++ + L + E GG N T+
Sbjct: 640 IIEHLKAPNLTNVNKISNIFEDVEFCVMSGTDSQPKPDLENRIAEFGGYIVQNPGPD-TY 698
Query: 363 CVAADNKGLKYE--AAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEV 420
CV A ++ ++ + + DV+ +W+L+C K + QP++ +H+ S+K+ E
Sbjct: 699 CVIAGSENIRVKNIILSNKHDVVKPAWLLECFKTKSFVPWQPRFMIHMCPSTKEHFAREY 758
Query: 421 DEFSDLYFWDLDLADIKQLLSNVDRS--EDPKTIDYYKKKYCPQDKWSC-----FHGCCI 473
D + D YF D DL +K++ S + S + P+ + + W C F +
Sbjct: 759 DCYGDSYFIDTDLNQLKEVFSGIKNSNEQTPEEMASLIADLEYRYSWDCSPLSMFRRHTV 818
Query: 474 YF--YHSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNLA-NATHVVVLSVLGYDVNF 530
Y Y LS E G L LE+ FHG KV + LA +HV++ +F
Sbjct: 819 YLDSYAVINDLSTKNE---GTRLAIKALELRFHGAKVVSCLAEGVSHVIIGEDHSRVADF 875
Query: 531 NSLTESFTAREKHLLWNKKLHVVRSQWLEDCLAKEQKSEEYEY 573
+ +F +K +++ W+ D + K + EE +Y
Sbjct: 876 KAFRRTF---------KRKFKILKESWVTDSIDKCELQEENQY 909
>gi|18653446|gb|AAL77435.1|AF479264_1 ligase IV, DNA, ATP-dependent [Homo sapiens]
Length = 844
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 154/523 (29%), Positives = 262/523 (50%), Gaps = 34/523 (6%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLII 122
AH +EV E I+ R+EGI++K S ++P R WLK+KPEY+ D LD+LI+
Sbjct: 341 AHTKNEVIDALNEAIDKREEGIMVKQPLSIYKPDKRGEGWLKIKPEYVSGLMDELDILIV 400
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
GGY+G G RGG ++ FL A+AE+P P P F + RVG+G + +EL + KL Y++
Sbjct: 401 GGYWGKGSRGGMMSHFLCAVAEKPPPGEKPSVFHTLSRVGSGCTMKELYDLGLKLAKYWK 460
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
+ ++APPS E+P+V+IE P S+I+ I + + S+++ +LRFPR
Sbjct: 461 PFH--RKAPPSSILC---GTEKPEVYIE-PCNSVIVQIKA-AEIVPSDMYKTGCTLRFPR 513
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSI 302
I+++R DK WH+C+ + +L ++G Y G DD+P++ + + K V
Sbjct: 514 IEKIRDDKEWHECMTLDDLEQLRGKASGKLASKHLYIG-GDDEPQEKKRKAAPKMKKVIG 572
Query: 303 VPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMNLNNSVTH 362
+ H +++++ ++IF D+ F ++ + L + E GG N T+
Sbjct: 573 IIEHLKAPNLTNVNKISNIFEDVEFCVMSGTDSQPKPDLENRIAEFGGYIVQNPGPD-TY 631
Query: 363 CVAADNKGLKYE--AAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEV 420
CV A ++ ++ + + DV+ +W+L+C K + QP++ +H+ S+K+ E
Sbjct: 632 CVIAGSENIRVKNIILSNKHDVVKPAWLLECFKTKSFVPWQPRFMIHMCPSTKEHFAREY 691
Query: 421 DEFSDLYFWDLDLADIKQLLSNVDRS--EDPKTIDYYKKKYCPQDKWSC-----FHGCCI 473
D + D YF D DL +K++ S + S + P+ + + W C F +
Sbjct: 692 DCYGDSYFIDTDLNQLKEVFSGIKNSNEQTPEEMASLIADLEYRYSWDCSPLSMFRRHTV 751
Query: 474 YF--YHSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNLA-NATHVVVLSVLGYDVNF 530
Y Y LS E G L LE+ FHG KV + LA +HV++ +F
Sbjct: 752 YLDSYAVINDLSTKNE---GTRLAIKALELRFHGAKVVSCLAEGVSHVIIGEDHSRVADF 808
Query: 531 NSLTESFTAREKHLLWNKKLHVVRSQWLEDCLAKEQKSEEYEY 573
+ +F +K +++ W+ D + K + EE +Y
Sbjct: 809 KAFRRTF---------KRKFKILKESWVTDSIDKCELQEENQY 842
>gi|73989476|ref|XP_542663.2| PREDICTED: DNA ligase 4 [Canis lupus familiaris]
Length = 911
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 161/524 (30%), Positives = 268/524 (51%), Gaps = 36/524 (6%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLII 122
AH EV E I+ R+EGI++K S ++P R WLK+KPEY+ D LD+LI+
Sbjct: 408 AHTKKEVIDALNEAIDKREEGIMIKHPLSIYKPDKRGEGWLKIKPEYVDGLMDELDILIV 467
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
GGY+G G RGG ++ FL A+AE+P P P F + CRVG+G + +EL + KL +++
Sbjct: 468 GGYWGKGSRGGMMSHFLCAVAEKPPPGEKPSVFHTLCRVGSGYTMKELYDLGLKLAKHWK 527
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
+ K+A PS E+P+V+IE P S+I+ + + + S+++ +LRFPR
Sbjct: 528 PFH--KKALPSSILC---GTEKPEVYIE-PCNSVIVQVKA-TEIVSSDMYKTGCTLRFPR 580
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSSNG-TTQKGKEYGGLQDDKPKQFRSSRKGEKKNVS 301
I+++R DK WH+C V +L ++G K + GG DD+P++ + + K +
Sbjct: 581 IEKIREDKEWHECTTVDDLEQLRGKASGKLASKHLDIGG--DDEPQEKKRKAAPKIKKII 638
Query: 302 IVPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMNLNNSVT 361
+ H ++S+I ++IF D+ F ++ ++ L + E GG N T
Sbjct: 639 GIIEHLKAPNLSNINKVSNIFEDVEFCVMSGTDSHPKPDLENRIAEFGGYIVQNPGPD-T 697
Query: 362 HCVAADNKGLKYE--AAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEE 419
+CV A ++ ++ + + + DV+ W+L+C K + QP++ +H+ S+K+ E
Sbjct: 698 YCVIAGSENIRVKNIISSNKHDVVKPEWLLECFKTKSCVPWQPRFMIHMCPSTKEHFARE 757
Query: 420 VDEFSDLYFWDLDLADIKQLLSNVDRS------EDPKTIDYYKKKYCPQDKWSC-FHGCC 472
D + D YF DLDL +K++ S + S E I + +Y C F C
Sbjct: 758 YDCYGDSYFVDLDLNQLKEVFSGIKNSSKQTPREMASLIADLEYRYSWDRSPLCLFRHCI 817
Query: 473 IY--FYHSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNLANA-THVVVLSVLGYDVN 529
+Y Y LS E G L LE+ FHG KV + LA +HV++ G D +
Sbjct: 818 VYLDLYAVINDLSTKIE---GTRLAITALELRFHGAKVVSCLAQGVSHVII----GEDHS 870
Query: 530 FNSLTESFTAREKHLLWNKKLHVVRSQWLEDCLAKEQKSEEYEY 573
++ +SF K +K +++ W+ + + K + EE +Y
Sbjct: 871 RVAVLKSFRRTLK-----RKFKILQQDWVTESIDKCELQEENQY 909
>gi|74195197|dbj|BAE28333.1| unnamed protein product [Mus musculus]
Length = 911
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 161/526 (30%), Positives = 259/526 (49%), Gaps = 36/526 (6%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLII 122
AH EV + I+ R+EGI++K S ++P R WLK+KPEY+ D LDVLI+
Sbjct: 408 AHTKKEVVDALNDAIDKREEGIMVKHPLSIYKPDKRGEGWLKIKPEYVSGLMDELDVLIV 467
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
GGY+G G RGG ++ FL A+AE P P P F + CRVG+G + +EL + KL Y++
Sbjct: 468 GGYWGKGSRGGMMSHFLCAVAETPPPGDRPSVFHTLCRVGSGYTMKELYDLGLKLAKYWK 527
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
+ K++PPS E+P+V+IE P+ S+I+ I + + S+++ +LRFPR
Sbjct: 528 PFH--KKSPPSSILC---GTEKPEVYIE-PQNSVIVQIKA-AEIVPSDMYKTGSTLRFPR 580
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSI 302
I+++R DK WH+C+ + +L ++G + G DD+P++ R + K
Sbjct: 581 IEKIRDDKEWHECMTLGDLEQLRGKASGKLATKHLHVG-DDDEPREKRRKPISKTKKAIR 639
Query: 303 VPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMNLNNSVTH 362
+ H ++S++ +++F D+ F ++ Y L + E GG N T+
Sbjct: 640 IIEHLKAPNLSNVNKVSNVFEDVEFCVMSGLDGYPKADLENRIAEFGGYIVQNPGPD-TY 698
Query: 363 CVAA--DNKGLKYEAAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEV 420
CV A +N +K + + DV+ W+L+C K + QP++ +H+ S+K+ E
Sbjct: 699 CVIAGSENVRVKNIISSDKNDVVKPEWLLECFKTKTCVPWQPRFMIHMCPSTKQHFAREC 758
Query: 421 DEFSDLYFWDLDLADIKQLLSNVDRSED-------PKTIDYYKKKYCPQDKWSCFHGCCI 473
D + D YF D DL +K++ + SE P D + S F I
Sbjct: 759 DCYGDSYFVDTDLDQLKEVFLGIKPSEQQTPEEMAPVIADLECRYSWDHSPLSMFRHYTI 818
Query: 474 Y--FYHSTEPLSPDWEVL-LGLALRRLKLEISFHGGKVCNNLA-NATHVVVLSVLGYDVN 529
Y Y LS E LG+ LE+ FHG KV + L+ +HV++ G D
Sbjct: 819 YLDLYAVINDLSSRIEATRLGIT----ALELRFHGAKVVSCLSEGVSHVII----GED-- 868
Query: 530 FNSLTESFTAREKHLLWNKKLHVVRSQWLEDCLAKEQKSEEYEYSL 575
F + L KK +++ W+ D + K + EE +Y L
Sbjct: 869 -QRRVTDFKIFRRML--KKKFKILQESWVSDSVDKGELQEENQYLL 911
>gi|410906057|ref|XP_003966508.1| PREDICTED: DNA ligase 4-like [Takifugu rubripes]
Length = 908
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 154/506 (30%), Positives = 252/506 (49%), Gaps = 29/506 (5%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLII 122
A + EV E I+NR+EGI++KD S ++P R WLK+KPEY+ D LD+LI+
Sbjct: 412 ARRMQEVVNALNEAIDNREEGIMVKDPSSIYKPDKRGEGWLKIKPEYVDGLMDELDLLIV 471
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
GGY+G GRRGG ++ FL A+AE P P P F + CR+G+G + +EL + KL +++
Sbjct: 472 GGYWGKGRRGGMMSHFLCAVAEAPKPGEKPSVFHTLCRIGSGYTMKELYELGLKLAKHWK 531
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
+ K PP+ + E+P+V+IE P S+I+ + + + S+++ +LRFPR
Sbjct: 532 VFR--KSDPPASILC---AAEKPEVYIE-PCNSVIIQVKA-AEIVGSDMYKTDCTLRFPR 584
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSI 302
I+++R DK WH+C+ + + ++G + + + DD K+ R KK V
Sbjct: 585 IEKIREDKEWHECMTLAELDQFRSKASG--KLASRHLHIDDDPQKKKRRVPVKPKKVVGT 642
Query: 303 VPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMNLNNSVTH 362
+ HF D+S +K ET +F D+ F +N + L K V GG N T+
Sbjct: 643 L-EHFKAQDLSGVKKETDMFEDVEFCILNGTEDHPKSELEKGVARCGGIVVQNPGRD-TY 700
Query: 363 CVAA--DNKGLKYEAAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEV 420
CV A +N +K + DV+ +W+L+C QK ++ QP++ +H+S S+++ +E
Sbjct: 701 CVIAGVENMRVKNLILSDQHDVVWAAWLLECIDQKDVVPWQPRHMIHMSPSTREHFAKEY 760
Query: 421 DEFSDLYFWDLDLADIKQLLSNVDRSEDPKTIDYYK-KKYCPQDKW--SCFHGCCIYFYH 477
D + D YF D D ++++ + S P +D + ++ C + S F +Y
Sbjct: 761 DAYGDSYFVDTDEQQLREVFGRIRSSNVPAAVDVCQVEQRCGWEDLPTSLFRPFKVYV-D 819
Query: 478 STEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNL-ANATHVVVLSVLGYDVNFNSLTES 536
+ + + L LE FHGG V L +HVVV T
Sbjct: 820 ACSDIGDAESAISASCLDIRALEFRFHGGTVVRRLEEGVSHVVV----------EEETRL 869
Query: 537 FTAREKHLLWNKKLHVVRSQWLEDCL 562
R + KK +V+ W+ D +
Sbjct: 870 LGLRTARRSFRKKFKIVKDSWVTDSI 895
>gi|26326007|dbj|BAC26747.1| unnamed protein product [Mus musculus]
Length = 911
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 161/526 (30%), Positives = 259/526 (49%), Gaps = 36/526 (6%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLII 122
AH EV + I+ R+EGI++K S ++P R WLK+KPEY+ D LDVLI+
Sbjct: 408 AHTKKEVVDALNDAIDKREEGIMVKHPLSIYKPDKRGEGWLKIKPEYVSGLMDELDVLIV 467
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
GGY+G G RGG ++ FL A+AE P P P F + CRVG+G + +EL + KL Y++
Sbjct: 468 GGYWGKGSRGGMMSHFLCAVAETPPPGDRPSVFHTLCRVGSGYTMKELYDLGLKLAKYWK 527
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
+ K++PPS E+P+V+IE P+ S+I+ I + + S+++ +LRFPR
Sbjct: 528 PFH--KKSPPSSILC---GTEKPEVYIE-PQNSVIVQIKA-AEIVPSDMYKTGSTLRFPR 580
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSI 302
I+++R DK WH+C+ + +L ++G + G DD+P++ R + K
Sbjct: 581 IEKIRDDKEWHECMTLGDLEQLRGKASGKLATKHLHVG-DDDEPREKRRKPISKTKKAIR 639
Query: 303 VPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMNLNNSVTH 362
+ H ++S++ +++F D+ F ++ Y L + E GG N T+
Sbjct: 640 IIEHLKAPNLSNVNKVSNVFEDVEFCVMSGLDGYPKADLENRIAEFGGYIVQNPGPD-TY 698
Query: 363 CVAA--DNKGLKYEAAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEV 420
CV A +N +K + + DV+ W+L+C K + QP++ +H+ S+K+ E
Sbjct: 699 CVIAGSENVRVKNIISSDKNDVVKPEWLLECFKTKTCVPWQPRFMIHMCPSTKQHFAREY 758
Query: 421 DEFSDLYFWDLDLADIKQLLSNVDRSED-------PKTIDYYKKKYCPQDKWSCFHGCCI 473
D + D YF D DL +K++ + SE P D + S F I
Sbjct: 759 DCYGDSYFVDTDLDQLKEVFLGIKPSEQQTPEEMAPVIADLECRYSWDHSPLSMFRHYTI 818
Query: 474 Y--FYHSTEPLSPDWEVL-LGLALRRLKLEISFHGGKVCNNLA-NATHVVVLSVLGYDVN 529
Y Y LS E LG+ LE+ FHG KV + L+ +HV++ G D
Sbjct: 819 YLDLYAVINDLSSRIEATRLGIT----ALELRFHGAKVVSCLSEGVSHVII----GED-- 868
Query: 530 FNSLTESFTAREKHLLWNKKLHVVRSQWLEDCLAKEQKSEEYEYSL 575
F + L KK +++ W+ D + K + EE +Y L
Sbjct: 869 -QRRVTDFKIFRRML--KKKFKILQESWVSDSVDKGELQEENQYLL 911
>gi|410947682|ref|XP_003980572.1| PREDICTED: DNA ligase 4 [Felis catus]
Length = 911
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 161/523 (30%), Positives = 260/523 (49%), Gaps = 34/523 (6%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLII 122
AH EV E I+ R+EGI++K S ++P R WLK+KPEY+ D LD LI+
Sbjct: 408 AHTKKEVIDALNEAIDKREEGIMIKHPLSIYKPDKRGEGWLKIKPEYVDGLMDELDTLIV 467
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
GGY+G G RGG ++ FL A+AE+P P P F + CRVG+G + +EL + KL +++
Sbjct: 468 GGYWGKGSRGGMMSHFLCAVAEKPPPGEKPSMFHTLCRVGSGYTMKELYDLGLKLAKHWK 527
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
+ K+APPS E+P+V+IE P S+I+ I + + SE++ +LRFPR
Sbjct: 528 PFH--KKAPPSSILC---GTEKPEVYIE-PCHSVIVQIKA-TEIVPSEMYKTGCTLRFPR 580
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSI 302
I+++R DK W++C + +L ++G Y G DD+P++ R K V
Sbjct: 581 IEKIREDKEWYECTTLDDLEQLRGKASGKLASKHLYVG-GDDEPQEKRRKAAPRIKKVVG 639
Query: 303 VPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMNLNNSVTH 362
+ H ++S++ +++F D+ F ++ ++ L + E GG N T+
Sbjct: 640 IIEHLKAPNLSNVNKVSNVFEDVEFCVMSGTNSHPKPDLENRLAEFGGYIVQNPGPD-TY 698
Query: 363 CVAADNKGLKYE--AAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEV 420
CV A ++ ++ + + DV+ W+L+C K + QP++ +H+ S+K+ E
Sbjct: 699 CVIAGSENIRVKNIISSNEHDVVKPEWLLECFKTKSCVPWQPRFMIHMCPSTKQHFAREY 758
Query: 421 DEFSDLYFWDLDLADIKQLLSNVDRS------EDPKTIDYYKKKYC-PQDKWSCFHGCCI 473
D + D YF D DL +K++ S + S E I + +Y S F I
Sbjct: 759 DCYGDSYFIDTDLNQLKEVFSGIKNSGEQSPGETASMIANLEYRYSWDHSPLSMFRHHII 818
Query: 474 Y--FYHSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNLANA-THVVVLSVLGYDVNF 530
Y Y LS E G L LE+ FHG KV + LA +HV++ G D
Sbjct: 819 YLDLYAVVNDLSTKIE---GTRLAFTALELRFHGAKVVSCLAQGVSHVII----GED--- 868
Query: 531 NSLTESFTAREKHLLWNKKLHVVRSQWLEDCLAKEQKSEEYEY 573
+S A + L +K +++ W+ D + K + EE +Y
Sbjct: 869 HSRVADLKAFRRTL--KRKFKILQQDWVTDSIDKCELQEENQY 909
>gi|84794637|ref|NP_795927.2| DNA ligase 4 [Mus musculus]
gi|408360059|sp|Q8BTF7.2|DNLI4_MOUSE RecName: Full=DNA ligase 4; AltName: Full=DNA ligase IV; AltName:
Full=Polydeoxyribonucleotide synthase [ATP] 4
gi|146327388|gb|AAI41418.1| Ligase IV, DNA, ATP-dependent [synthetic construct]
gi|148690091|gb|EDL22038.1| ligase IV, DNA, ATP-dependent, isoform CRA_a [Mus musculus]
gi|148690093|gb|EDL22040.1| ligase IV, DNA, ATP-dependent, isoform CRA_a [Mus musculus]
Length = 911
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 161/526 (30%), Positives = 259/526 (49%), Gaps = 36/526 (6%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLII 122
AH EV + I+ R+EGI++K S ++P R WLK+KPEY+ D LDVLI+
Sbjct: 408 AHTKKEVVDALNDAIDKREEGIMVKHPLSIYKPDKRGEGWLKIKPEYVSGLMDELDVLIV 467
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
GGY+G G RGG ++ FL A+AE P P P F + CRVG+G + +EL + KL Y++
Sbjct: 468 GGYWGKGSRGGMMSHFLCAVAETPPPGDRPSVFHTLCRVGSGYTMKELYDLGLKLAKYWK 527
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
+ K++PPS E+P+V+IE P+ S+I+ I + + S+++ +LRFPR
Sbjct: 528 PFH--KKSPPSSILC---GTEKPEVYIE-PQNSVIVQIKA-AEIVPSDMYKTGSTLRFPR 580
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSI 302
I+++R DK WH+C+ + +L ++G + G DD+P++ R + K
Sbjct: 581 IEKIRDDKEWHECMTLGDLEQLRGKASGKLATKHLHVG-DDDEPREKRRKPISKTKKAIR 639
Query: 303 VPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMNLNNSVTH 362
+ H ++S++ +++F D+ F ++ Y L + E GG N T+
Sbjct: 640 IIEHLKAPNLSNVNKVSNVFEDVEFCVMSGLDGYPKADLENRIAEFGGYIVQNPGPD-TY 698
Query: 363 CVAA--DNKGLKYEAAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEV 420
CV A +N +K + + DV+ W+L+C K + QP++ +H+ S+K+ E
Sbjct: 699 CVIAGSENVRVKNIISSDKNDVVKPEWLLECFKTKTCVPWQPRFMIHMCPSTKQHFAREY 758
Query: 421 DEFSDLYFWDLDLADIKQLLSNVDRSED-------PKTIDYYKKKYCPQDKWSCFHGCCI 473
D + D YF D DL +K++ + SE P D + S F I
Sbjct: 759 DCYGDSYFVDTDLDQLKEVFLGIKPSEQQTPEEMAPVIADLECRYSWDHSPLSMFRHYTI 818
Query: 474 Y--FYHSTEPLSPDWEVL-LGLALRRLKLEISFHGGKVCNNLA-NATHVVVLSVLGYDVN 529
Y Y LS E LG+ LE+ FHG KV + L+ +HV++ G D
Sbjct: 819 YLDLYAVINDLSSRIEATRLGIT----ALELRFHGAKVVSCLSEGVSHVII----GED-- 868
Query: 530 FNSLTESFTAREKHLLWNKKLHVVRSQWLEDCLAKEQKSEEYEYSL 575
F + L KK +++ W+ D + K + EE +Y L
Sbjct: 869 -QRRVTDFKIFRRML--KKKFKILQESWVSDSVDKGELQEENQYLL 911
>gi|431913220|gb|ELK14902.1| DNA ligase 4 [Pteropus alecto]
Length = 911
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 157/523 (30%), Positives = 260/523 (49%), Gaps = 34/523 (6%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLII 122
AH EV E I+ R+EGI++K S ++P R WLK+KPEY+ D LDV+I+
Sbjct: 408 AHTKKEVIDALNEAIDKREEGIMVKHPLSIYKPDKRGEGWLKIKPEYVSGLMDELDVIIV 467
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
GGY+G G RGG ++ FL A+ E+P P F + CRVG+G + +EL + KL Y++
Sbjct: 468 GGYWGKGSRGGMMSHFLCAVTEKPPSGEKPSVFHTLCRVGSGYTMKELYDLGLKLAKYWK 527
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
+ K+APP + E+P+V+IE P S+I+ I + + S+++ +LRFPR
Sbjct: 528 PFH--KKAPP---RSIVCGTEKPEVYIE-PCNSVIVQIKA-TEIVPSDMYKTGCTLRFPR 580
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSI 302
I+++R DK W +C+ + +L ++G Y G DD+P++ + + K V
Sbjct: 581 IEKIREDKEWRECMTLDDLEQLRGKASGKLASKHFYVG-GDDEPQEKKRKAAPKTKKVIG 639
Query: 303 VPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMNLNNSVTH 362
+ H ++S+I +SIF D+ F ++ + L + E GG N T+
Sbjct: 640 IIEHLKAPNLSNINKVSSIFEDVEFCVMSGTESCPKLDLENRIAELGGYIVQNPGPD-TY 698
Query: 363 CVAADNKGLKYE--AAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEV 420
C+ A ++ ++ + + + DV+ W+L+C + K + QP++ +H+ S+K+ E
Sbjct: 699 CIIAGSENIRVKNIISSNKHDVVKPEWLLECFNTKSCVPWQPRFMIHMCPSTKQHFAREY 758
Query: 421 DEFSDLYFWDLDLADIKQLLSNVDRS--EDPKTIDYYKKKYCPQDKWSC-----FHGCCI 473
D + D YF D DL +K++ S + S + PK + + W C F I
Sbjct: 759 DCYGDSYFIDTDLNQLKEVFSGIKNSSEQTPKEMASVIADLEYRYSWECSPLSMFRHYTI 818
Query: 474 Y--FYHSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNLA-NATHVVVLSVLGYDVNF 530
Y Y LS + E G L LE+ FHG KV + LA +HV+V V+F
Sbjct: 819 YLDLYTVINDLSTEIE---GTRLAFTALELRFHGAKVVSCLAEGVSHVIVGEDHSRVVDF 875
Query: 531 NSLTESFTAREKHLLWNKKLHVVRSQWLEDCLAKEQKSEEYEY 573
+ + K +++ W+ D + K + EE +Y
Sbjct: 876 KAFRRTLKI---------KFKILQDGWVTDSIDKCELQEEKQY 909
>gi|158258270|dbj|BAF85108.1| unnamed protein product [Homo sapiens]
Length = 844
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 154/523 (29%), Positives = 261/523 (49%), Gaps = 34/523 (6%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLII 122
AH +EV E I+ R+EGI++K S ++P R WLK+KPEY+ D LD+LI+
Sbjct: 341 AHTKNEVIDALNEAIDKREEGIMVKQPLSIYKPDKRGEGWLKIKPEYVSGLMDELDILIV 400
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
GGY+G G RGG ++ FL A+AE+P P P F + RVG+G + +EL + KL Y++
Sbjct: 401 GGYWGKGSRGGMMSHFLCAVAEKPPPGEKPSVFHTLSRVGSGCTMKELYDLGLKLAKYWK 460
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
+ ++APPS E+P+V+IE P S+I+ I + + S+++ +LRFPR
Sbjct: 461 PFH--RKAPPSSILC---GTEKPEVYIE-PCNSVIVQIKA-AEIVPSDMYKTGCTLRFPR 513
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSI 302
I+++R DK WH+C+ + +L ++G Y G DD+P++ + + K V
Sbjct: 514 IEKIRDDKEWHECMTLDDLEQLRGKASGKLASKHLYIG-GDDEPQEKKRKAAPKMKKVIG 572
Query: 303 VPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMNLNNSVTH 362
+ H +++++ ++IF D+ F ++ + L E GG N T+
Sbjct: 573 IIEHLKAPNLTNVNKISNIFEDVEFCVMSGTDSQPKPDLENRTAEFGGYIVQNPGPD-TY 631
Query: 363 CVAADNKGLKYE--AAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEV 420
CV A ++ ++ + + DV+ +W+L+C K + QP++ +H+ S+K+ E
Sbjct: 632 CVIAGSENIRVKNIILSNKHDVVKPAWLLECFKTKSFVPWQPRFMIHMCPSTKEHFAREY 691
Query: 421 DEFSDLYFWDLDLADIKQLLSNVDRS--EDPKTIDYYKKKYCPQDKWSC-----FHGCCI 473
D + D YF D DL +K++ S + S + P+ + + W C F +
Sbjct: 692 DCYGDSYFIDTDLNQLKEVFSGIKNSNEQTPEEMASLIADLEYRYSWDCSPLSMFRRHTV 751
Query: 474 YF--YHSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNLA-NATHVVVLSVLGYDVNF 530
Y Y LS E G L LE+ FHG KV + LA +HV++ +F
Sbjct: 752 YLDSYAVINDLSTKNE---GTRLAIKALELRFHGAKVVSCLAEGVSHVIIGEDHSRVADF 808
Query: 531 NSLTESFTAREKHLLWNKKLHVVRSQWLEDCLAKEQKSEEYEY 573
+ +F +K +++ W+ D + K + EE +Y
Sbjct: 809 KAFRRTF---------KRKFKILKESWVTDSIDKCELQEENQY 842
>gi|327261085|ref|XP_003215362.1| PREDICTED: DNA ligase 4-like [Anolis carolinensis]
Length = 911
Score = 227 bits (578), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 156/507 (30%), Positives = 261/507 (51%), Gaps = 29/507 (5%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLII 122
A+ EV E I+NR+EGIV+KD S ++P R WLK+KPEY+ D LD+L++
Sbjct: 413 ANTRKEVVDALNEAIDNREEGIVVKDPMSAYKPDKRGEGWLKIKPEYVNGLMDELDLLVV 472
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
GGY+G G RGG ++ FL A+AE P P P F S CRVG+G + +EL + KL Y++
Sbjct: 473 GGYWGKGLRGGMMSHFLCAVAETPPPGEKPSVFHSICRVGSGYTMKELYDLGLKLAKYWK 532
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
Y KR PP E+P+V+IE P S+I+ I + + S+++ +LRFPR
Sbjct: 533 PYR--KRDPPCSILC---GTEKPEVYIE-PCNSVIVQIKA-AEIVNSDMYKTECTLRFPR 585
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSI 302
I+++R DK WH+C+ + +L ++G + ++ + D++P++ + + K
Sbjct: 586 IEKIREDKEWHECMTLDLLEQLRGKASG--KLATKHLDISDNEPQEKKRKTVPKVKKKLD 643
Query: 303 VPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMNLNNSVTH 362
+ HF D+S + +S+F ++ F ++ +Y+ L + E GG+ N T+
Sbjct: 644 LMDHFKAPDLSSVSKVSSMFQEVEFCVMSGTESYTKYELESKIAEFGGSIVQNPGPD-TY 702
Query: 363 CVAA--DNKGLKYEAAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEV 420
CV A +N +K + + DV+ W++ C K+ + QP + +H+S +K+ E
Sbjct: 703 CVVAGTENVRVKNIISSNKHDVVRAEWLVQCFQTKQFVPWQPAFIIHMSPETKQHFAREY 762
Query: 421 DEFSDLYFWDLDLADIKQLLSNVDRSEDP---KTIDYYKKKYCPQDKWSC-FHGCCIYFY 476
D + D Y D+ +A +K++ S ++ E+ + I + +Y + C F C +Y
Sbjct: 763 DCYGDSYTADVGVAQLKEVFSRMNDLEEKVSWEVIADIEARYLWDNSGLCLFRQCTVYLD 822
Query: 477 HSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNL-ANATHVVVLSVLGYDVNFNSLTE 535
S E + ++ L R L + FHG KV L +HV+ S G D LT
Sbjct: 823 PSAEVSNSGAKITQTRLLTR-ALTLRFHGAKVVPQLEEGVSHVI--SKDGAD-----LTR 874
Query: 536 SFTAREKHLLWNKKLHVVRSQWLEDCL 562
T R + +K +V QW++D +
Sbjct: 875 IKTIRRT---FERKFKIVSEQWVKDSI 898
>gi|26350485|dbj|BAC38882.1| unnamed protein product [Mus musculus]
Length = 845
Score = 226 bits (577), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 161/526 (30%), Positives = 258/526 (49%), Gaps = 36/526 (6%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLII 122
AH EV + I+ R+EGI++K S ++P R WLK+KPEY+ D LDVLI+
Sbjct: 342 AHTKKEVVDALNDAIDKREEGIMVKHPLSIYKPDKRGEGWLKIKPEYVSGLMDELDVLIV 401
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
GGY+G G RGG ++ FL A+AE P P P F + CRVG+G + +EL + KL Y++
Sbjct: 402 GGYWGKGSRGGMMSHFLCAVAETPPPGDRPSVFHTLCRVGSGYTMKELYDLGLKLAKYWK 461
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
+ K++PPS E+P+V+IE P+ S+I+ I + + S+++ +LRFPR
Sbjct: 462 PFH--KKSPPSSILC---GTEKPEVYIE-PQNSVIVQIKA-AEIVPSDMYKTGSTLRFPR 514
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSI 302
I+++R DK WH+C+ + +L ++G + G DD+P++ R + K
Sbjct: 515 IEKIRDDKEWHECMTLGDLEQLRGKASGKLATKHLHVG-DDDEPREKRRKPISKTKKAIR 573
Query: 303 VPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMNLNNSVTH 362
+ H ++S++ +++F D+ F ++ Y L + E GG N T+
Sbjct: 574 IIEHLKAPNLSNVNKVSNVFEDVEFCVMSGLDGYPKADLENRIAEFGGYIVQNPGPD-TY 632
Query: 363 CVAA--DNKGLKYEAAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEV 420
CV A +N +K + + DV+ W+L+C K + QP++ +H+ S+K+ E
Sbjct: 633 CVIAGSENVRVKNIISSDKNDVVKPEWLLECFKTKTCVPWQPRFMIHMCPSTKQHFAREY 692
Query: 421 DEFSDLYFWDLDLADIKQLLSNVDRSED-------PKTIDYYKKKYCPQDKWSCFHGCCI 473
D + D YF D DL +K++ + SE P D + S F I
Sbjct: 693 DCYGDSYFVDTDLDQLKEVFLGIKPSEQQTPEEMAPVIADLECRYSWDHSPLSMFRHYTI 752
Query: 474 Y--FYHSTEPLSPDWEVL-LGLALRRLKLEISFHGGKVCNNLA-NATHVVVLSVLGYDVN 529
Y Y LS E LG+ LE+ FHG KV L+ +HV++ G D
Sbjct: 753 YLDLYAVINDLSSRIEATRLGIT----ALELRFHGAKVVTCLSEGVSHVII----GED-- 802
Query: 530 FNSLTESFTAREKHLLWNKKLHVVRSQWLEDCLAKEQKSEEYEYSL 575
F + L KK +++ W+ D + K + EE +Y L
Sbjct: 803 -QRRVTDFKIFRRML--KKKFKILQESWVSDSVDKGELQEENQYLL 845
>gi|344284665|ref|XP_003414085.1| PREDICTED: DNA ligase 4-like [Loxodonta africana]
Length = 916
Score = 226 bits (576), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 163/525 (31%), Positives = 266/525 (50%), Gaps = 36/525 (6%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLII 122
AH EV E I+ R+EGI++K S ++PG R WLK+KPEY+ D LD+LI+
Sbjct: 411 AHTKKEVIDALNEAIDKREEGIMIKYPLSIYKPGKRGEGWLKIKPEYVNGLMDELDILIV 470
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
GGY+G G RGG ++ FL A+AE+P P F + CRVG+G + +EL + KL +++
Sbjct: 471 GGYWGKGLRGGMMSHFLCAVAEKPPTGEKPSVFHTVCRVGSGYTMKELYDLGLKLANHWK 530
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
+ ++APPS E+P+V+IE P S+I+ I + + S+++ +LRFPR
Sbjct: 531 PFN--RKAPPSSILC---GTEKPEVYIE-PCSSVIVQIKA-AEIVPSDMYKTDCTLRFPR 583
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKP--KQFRSSRKGEKKNV 300
I+++R DK WH+C+ + +L ++G + DD+P K+ +++ KK V
Sbjct: 584 IEKIREDKEWHECMTLDELEQLRGKASGKLASRHLHVDDDDDEPQEKKRKAAVPKLKKAV 643
Query: 301 SIVPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMNLNNSV 360
I+ HF ++S+I ++IF D+ F +N +S L + E GG N
Sbjct: 644 GII-EHFKAPNLSNINKVSNIFEDVEFCVMNGIEGHSKPDLENRIAEFGGYIVQNPGPD- 701
Query: 361 THCVAADNKGLKYE--AAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQE 418
T C+ A ++ ++ + + DV+ W+L+C K + QP++ +H+ S+K+
Sbjct: 702 TACIIAGSENIRVRNIISSNKHDVVKPDWLLECFKTKSCVPWQPRFMIHMCPSTKQHFAL 761
Query: 419 EVDEFSDLYFWDLDLADIKQLLSNVDRS------EDPKTIDYYKKKYC-PQDKWSCFHGC 471
E D + D YF D DL ++++ S + S E I + +Y S F
Sbjct: 762 EYDCYGDSYFVDTDLNQLREVFSVIKHSNEQTPEEMASAIADLEYRYSWDSSPLSMFRHH 821
Query: 472 CIY--FYHSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNLA-NATHVVVLSVLGYDV 528
+Y Y LS E G L LE+ FHG KV + LA +HV+V G D
Sbjct: 822 TVYLDLYAVINDLSTKIE---GARLATKALELRFHGAKVVSCLAEGVSHVIV----GED- 873
Query: 529 NFNSLTESFTAREKHLLWNKKLHVVRSQWLEDCLAKEQKSEEYEY 573
+S F A + L +K +++ W+ D + + + EE +Y
Sbjct: 874 --HSHVADFKAFRRTL--KRKFKILQEAWVTDSIDRCELQEENQY 914
>gi|379642981|ref|NP_001243858.1| DNA ligase 4 [Equus caballus]
Length = 911
Score = 225 bits (573), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 163/542 (30%), Positives = 269/542 (49%), Gaps = 34/542 (6%)
Query: 45 LRSQIMAADQTGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWL 104
L S M E + AH EV E I+ R+EGI++K S ++P R WL
Sbjct: 389 LSSIFMPIPGRIEIVQKMQAHTKQEVIDALNEAIDKREEGIMIKHPLSIYKPDKRGEGWL 448
Query: 105 KLKPEYIRAGSD-LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGT 163
K+KPEY+ +D LD+LI+GGY+G G RGG ++ FL A+AE+P P F + CRVG+
Sbjct: 449 KIKPEYVNGLTDELDILIVGGYWGKGSRGGMMSHFLCAVAEKPPAGEKPSVFHTLCRVGS 508
Query: 164 GLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSD 223
G + +EL + KL +++ + K+APPS E+P+V+IE P S+I+ I +
Sbjct: 509 GYTMKELYDLGLKLAQHWKPFH--KKAPPSSILC---GIEKPEVYIE-PCNSVIVQIKA- 561
Query: 224 IRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQD 283
+ S+++ +LRFPRI+++R DK WH+CL + +L ++G Y G +
Sbjct: 562 TEIVSSDMYKTGCTLRFPRIEKIREDKEWHECLTLDDLEQLRGKASGKLASRHLYVGGDE 621
Query: 284 DKPKQFRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHK 343
+ ++ R S +K + I+ H ++S+I +++F D+ F ++ + L
Sbjct: 622 EPQEKKRKSAPKIRKVIGII-EHLKAPNLSNINKVSNMFEDVEFCVMSGIDNHPKPDLEN 680
Query: 344 MVVENGGTFSMNLNNSVTHCVAADNKGLKYE--AAKRRGDVIHYSWVLDCCSQKKLLQLQ 401
+ E GG N T+CV A ++ ++ + + + DV+ W+L+C K + Q
Sbjct: 681 RIAEFGGYIVQNPGPD-TYCVIAGSENIRVKNIISSNKHDVVKPEWLLECFKTKSCVPWQ 739
Query: 402 PKYYLHLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNVDR------SEDPKTIDYY 455
P++ +H+ S+K+ E D + D YF D D+ +K++ S + +E I
Sbjct: 740 PRFMIHMCPSTKEHFAREYDCYGDSYFVDTDVNHLKEVFSGIKNCSEQTPNEMASVIADL 799
Query: 456 KKKYC-PQDKWSCFHGCCIY--FYHSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNL 512
+ +Y S F IY Y LS E G L LE+ FHG KV + L
Sbjct: 800 EYRYSWDHSPLSMFRHHTIYLDLYAVIRDLSTKIE---GTRLAVTALELRFHGAKVVSRL 856
Query: 513 A-NATHVVVLSVLGYDVNFNSLTESFTAREKHLLWNKKLHVVRSQWLEDCLAKEQKSEEY 571
A +HV++ G D S +F A + L +K +++ W+ D + K + EE
Sbjct: 857 AEGVSHVII----GEDY---SRVAAFKAFRRTL--KRKFKILQEGWVTDSIDKCELQEEN 907
Query: 572 EY 573
+Y
Sbjct: 908 QY 909
>gi|402902442|ref|XP_003914111.1| PREDICTED: LOW QUALITY PROTEIN: DNA ligase 4 [Papio anubis]
Length = 910
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 151/512 (29%), Positives = 255/512 (49%), Gaps = 34/512 (6%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLII 122
AH +EV E I+ R+EGI++K S ++P R WLK+KPEY+ D LD+LI+
Sbjct: 408 AHTKNEVIDALNEAIDKREEGIMIKQPLSIYKPDKRGEGWLKIKPEYVTGLMDELDILIV 467
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
GGY+G G RGG ++ FL A+AE+P P P F + RVG+G + +EL + KL Y++
Sbjct: 468 GGYWGKGSRGGMMSHFLCAVAEKPPPGEKPSVFHTLSRVGSGCTMKELYDLGLKLAKYWK 527
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
+ K+APPS E+P+V+IE P S+I+ I + + S+++ +LRFPR
Sbjct: 528 PFH--KKAPPSSILC---GTEKPEVYIE-PCNSVIVQIKA-AEIVPSDMYKTGCTLRFPR 580
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSI 302
I+++R DK WH+C+ + +L ++G + G DD P++ + + K V
Sbjct: 581 IEKIREDKEWHECMTLDDLEQLRGKASGKLASKHLFVG-GDDGPQEKKRKAAPKMKKVIG 639
Query: 303 VPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMNLNNSVTH 362
+ H +++++ ++IF D+ F ++ + L + E GG N T+
Sbjct: 640 IIEHLKAPNLTNVNKISNIFEDVEFCVMSGTDSQPKPDLENRIAELGGYIVQNPGPD-TY 698
Query: 363 CVAADNKGLKYE--AAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEV 420
CV A +K ++ + + DV+ +W+L+C K + QP++ +H+ S+K+ E
Sbjct: 699 CVIAGSKNIRVKNIILSNKHDVVKPAWLLECFKTKSFVPWQPRFMIHMCPSTKEHFAREY 758
Query: 421 DEFSDLYFWDLDLADIKQLLSNVDRS--EDPKTIDYYKKKYCPQDKWSC-----FHGCCI 473
D + D YF D DL +K++ S + S + P+ + + W C F +
Sbjct: 759 DCYGDSYFVDTDLNQLKEVFSGIKNSYEQTPEEMASLIADLEYRYSWDCSPLSMFRRHTV 818
Query: 474 Y--FYHSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNLA-NATHVVVLSVLGYDVNF 530
Y Y LS E G L LE+ FHG KV + LA +HV++ +F
Sbjct: 819 YLDLYVVINDLSTKTE---GTRLAIKALELRFHGAKVVSCLAEGVSHVIIGEDHSRVADF 875
Query: 531 NSLTESFTAREKHLLWNKKLHVVRSQWLEDCL 562
+ +F +K +++ W+ D +
Sbjct: 876 KAFRRTF---------KRKFKILKESWVTDSI 898
>gi|449669217|ref|XP_002166379.2| PREDICTED: DNA ligase 4 [Hydra magnipapillata]
Length = 891
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 158/512 (30%), Positives = 263/512 (51%), Gaps = 46/512 (8%)
Query: 63 VAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGK-WLKLKPEYIRAGSD-LDVL 120
+ N +++ I+ +EGIV+KD S + P R+G W KLKPEYI + SD LD++
Sbjct: 400 IGRNKEDIINAVNNAIDKCEEGIVVKDPLSLYVPNKRNGSGWYKLKPEYIDSLSDDLDLI 459
Query: 121 IIGGYYGSGRRGGEVAQFLVALAERP--APDTYPRRFISFCRVGTGLSDEELDAVVTKLK 178
IIGG YGSG RGG ++ FL+ +A + DT P F +F VG+G +D+EL ++ +KL
Sbjct: 460 IIGGQYGSGHRGGIISHFLLGVAVKTEEGSDTKPSYFKTFAAVGSGYTDKELSSLCSKLD 519
Query: 179 PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSL 238
Y++K++ + PS + T+ KE+PDVWIE P+KS+I+ + + I ++ ++ Y+L
Sbjct: 520 KYWQKFDLKRL--PSMIEFTSGCKEKPDVWIE-PDKSVIVQVKA-AEIIVTDKYAFGYTL 575
Query: 239 RFPRIDRVRYDKPWHDCLDVQSFVELVHSSNG--TTQKGKEYGGLQDDKPKQFRSSRKGE 296
RFPR++R RYDK W+DC+ + ++L ++ G T++ + +K K+ R +
Sbjct: 576 RFPRLERFRYDKSWYDCMTTEDIIDLQKAACGKLTSKHIESESSTTSNKKKR----RLDD 631
Query: 297 KKNVSI-VPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMN 355
+ + + F DVS+I +S F F +N + L + + E G F N
Sbjct: 632 HVDFPVAIGKQFKAADVSNINESSSAFKGKEFCVINGSLTCTKQQLEEKIAEMSGVFVQN 691
Query: 356 LNNSVTHCVAAD--NKGLKYEAAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSK 413
T+CV AD N +K+ + DV+ +W+L+C +K LL PKY + + +
Sbjct: 692 PGED-TYCVIADKVNVRVKHIIGSGKCDVVKVTWLLECYEKKALLPFCPKYMHYSTTKTL 750
Query: 414 KKLQEEVDEFSDLYFWDLDLADIKQLLSNVDRSE-DPKTIDYYKKKYCPQDKWSCFHGCC 472
L+ + D+F D Y D++ + + + S+++ + + I ++Y
Sbjct: 751 ALLEVDFDKFGDHYLEDINPSTLSDIFSHMNADNLNAENIAELDERYTI----------- 799
Query: 473 IYFYHSTEPLSPDWEVLLGLALRR-LKLEISFHGGKVCNNLANATHVVV-LSVLGYDVNF 530
S+ L ++ L L + LE F+GG +CN L A+HV+V S VN
Sbjct: 800 -----SSVGLFRRHKLYLASKLHSFVSLEFRFYGGTLCNQLNVASHVLVDESDPETLVNI 854
Query: 531 NSLTESFTAREKHLLWNKKLHVVRSQWLEDCL 562
L + KK HVV + W+ DC+
Sbjct: 855 RQLIRNL---------KKKPHVVTASWIRDCI 877
>gi|432849667|ref|XP_004066615.1| PREDICTED: DNA ligase 4-like [Oryzias latipes]
Length = 912
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 150/467 (32%), Positives = 244/467 (52%), Gaps = 23/467 (4%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLII 122
A +V EV + I++R+EGI++KD S ++P R WLK+KPEY+ + D LD+LI+
Sbjct: 414 ARSVQEVVSALNDAIDSREEGIMVKDPLSIYKPDKRGEGWLKIKPEYVDSLMDELDLLIV 473
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
GGY+G GRRGG ++ FL A+AE P P P F S CR+G+G + +EL + KL +++
Sbjct: 474 GGYWGKGRRGGMMSHFLCAVAEAPKPGEKPSVFHSLCRIGSGYTMKELYDLGLKLAKHWK 533
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
Y PPS S E+P+V+IE P SII+ + + I S+++ +LRFPR
Sbjct: 534 VYRRSD-PPPSLL----CSTEKPEVYIE-PCNSIIVQVKA-AEIIPSDMYRTNCTLRFPR 586
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSR--KGEKKNV 300
I+++R DK WH C+ + +L ++G DD+P++ + + KK V
Sbjct: 587 IEKIRDDKEWHQCMTLAELDQLRSKASGKLASRHLRIDDGDDQPQKKKKRKLPTKAKKAV 646
Query: 301 SIVPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMNLNNSV 360
SI+ HF D+S + ET +F D+ F +N + L K V GG N
Sbjct: 647 SIL-DHFKPQDLSAVSKETDMFEDVEFCILNGTEDHPKCELEKGVASCGGIVVQNPGRE- 704
Query: 361 THCV--AADNKGLKYEAAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQE 418
T+CV A+N +K + + DV+ SW+L+C +K++ QP++ +H+S ++++ +
Sbjct: 705 TYCVIAGAENMRVKNLISSDQHDVVWASWLLECLERKEVAPWQPRHMIHMSPTTREHFAK 764
Query: 419 EVDEFSDLYFWDLDLADIKQLLSNVDRSEDPKTIDYYKKKY----CPQDKWSCFHGCCIY 474
E D D YF D D ++++ + +E ++ +++Y P + F
Sbjct: 765 EYDPHGDSYFLDTDGQQLREVFGRIGDAEVEISVAQVEERYGFSDLPTSMFRPFTAYADV 824
Query: 475 FYHSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNL-ANATHVVV 520
F EP + ++ L LE FHGG+V L +HV+V
Sbjct: 825 FARVGEPDT----LIPATCLEIRALEFRFHGGRVVERLEEGVSHVLV 867
>gi|417405223|gb|JAA49329.1| Putative atp-dependent dna ligase i [Desmodus rotundus]
Length = 911
Score = 223 bits (569), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 156/523 (29%), Positives = 263/523 (50%), Gaps = 34/523 (6%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLII 122
AH EV E I+ R+EGI++K S ++P R WLK+KPEY+ D LD++I+
Sbjct: 408 AHTNKEVIDALNEAIDKREEGIMIKHPLSIYKPDKRGEGWLKIKPEYVTGLMDELDIIIV 467
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
GGY+G G RGG ++ FL A+AE+P P F + CRVG+G + +EL + KL +++
Sbjct: 468 GGYWGKGSRGGMMSHFLCAVAEKPPSGKKPSVFHTLCRVGSGYTMKELYDLGLKLAKHWK 527
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
+ K+APPS E+P+V+IE P S+I+ I + + S+++ +LRFPR
Sbjct: 528 PFH--KKAPPSSILC---GTEKPEVYIE-PCNSVIVQIKA-TEIVPSDMYKTGCTLRFPR 580
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSI 302
I+++R DK WH+C+ + +L ++G K + DD P++ + + K V
Sbjct: 581 IEKIREDKEWHECMTLDDLEQLRGKASGKLA-SKHFCVGGDDGPQEKKRKAAPKIKKVIG 639
Query: 303 VPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMNLNNSVTH 362
+ H ++S+I ++IF D+ F ++ ++ L + E GG N T+
Sbjct: 640 IIEHLKAPNLSNINKVSNIFEDVEFCVMSGINSHPKPDLENRIAEFGGYIVQNPGPE-TY 698
Query: 363 CVAADNKGLKYE--AAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEV 420
C+ A ++ ++ + + + DV+ W+L+C K + QP++ +H+ S+K+ E
Sbjct: 699 CIIAGSENIRVKNIISSNKHDVVKPEWLLECFKTKSCVPWQPRFMIHMCPSTKQHFAREY 758
Query: 421 DEFSDLYFWDLDLADIKQLLSNVDRSED--PKTIDYYKKKYCPQDKWSC-----FHGCCI 473
D + D YF D DL +K++ + + + PK + + W C F I
Sbjct: 759 DCYGDSYFVDTDLNQLKEVFTGIKSPSEQAPKEMASVVADLEYRYSWDCSPLSMFRHHTI 818
Query: 474 Y--FYHSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNLA-NATHVVVLSVLGYDVNF 530
Y Y L+ E G L LE+ FHG KV + LA +HV++ G D
Sbjct: 819 YLDLYTVINDLNSKIE---GTRLAITALELRFHGAKVVSYLAEGVSHVII----GED--- 868
Query: 531 NSLTESFTAREKHLLWNKKLHVVRSQWLEDCLAKEQKSEEYEY 573
+S F A + L +K +++ W+ D + K + +E EY
Sbjct: 869 HSRVADFKAFRRTL--KRKFKILQEGWVTDSIDKCELRDENEY 909
>gi|395527303|ref|XP_003765789.1| PREDICTED: DNA ligase 4 [Sarcophilus harrisii]
Length = 911
Score = 223 bits (568), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 160/523 (30%), Positives = 263/523 (50%), Gaps = 34/523 (6%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLII 122
A+ EV E I+ +EGIV+K+ S ++P R WLK+KPEYI D LD+LI+
Sbjct: 408 ANTKKEVIDALNEAIDKCEEGIVIKNPLSIYKPDKRGEGWLKIKPEYINKLMDELDILIV 467
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
GGY+G G RGG ++ FL A+AE P P P F + CRVG+G + +EL + KL +++
Sbjct: 468 GGYWGKGSRGGMMSHFLCAVAETPPPGEKPSVFHTLCRVGSGYTMKELYDLGLKLSKHWK 527
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
+ KR PP+ KE+P+V+IE P S+I+ I + + S+++ +LRFPR
Sbjct: 528 PFH--KRTPPNSILC---GKEKPEVYIE-PCNSVIVQIKA-AEIVSSDMYKTDCTLRFPR 580
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSI 302
I+++R DK W++C+ + L ++G + D++P++ + KK ++I
Sbjct: 581 IEKIREDKEWYECMTLSELENLRGKASGKLATKHLFIAGDDEEPQEKKRKAVKVKKAITI 640
Query: 303 VPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMNLNNSVTH 362
+ H D+S+I +++F D+ F ++ ++S SL + E GG N T+
Sbjct: 641 I-EHLKAPDLSNINKISNVFEDVEFCVMSGTDSHSKSSLENCIAELGGYIVQNPGPD-TY 698
Query: 363 CVAA--DNKGLKYEAAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEV 420
C+ A +N +K + + DV+ W+L+C K+ + QP + +H+ S+K+ E
Sbjct: 699 CIIAGTENVRVKNIISSNKHDVVKAEWLLECFKAKEHVPWQPCFMIHMCPSTKEHFAREY 758
Query: 421 DEFSDLYFWDLDLADIKQLLSNVDRSED-------PKTIDYYKKKYCPQDKWSCFHGCCI 473
D + D YF D DL +K++ S + ++ P D + S F C I
Sbjct: 759 DCYGDSYFADTDLLQLKEVFSRIKNVKENSPKEMSPVITDLEYRYSWDNSPLSMFRQCVI 818
Query: 474 Y--FYHSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNL-ANATHVVVLSVLGYDVNF 530
Y Y L+ + G L LE+ F+G +V + L +HV+V G D
Sbjct: 819 YVDMYAIINDLTTQIQ---GTRLSIKALELRFYGAQVISCLEEGVSHVIV----GED--- 868
Query: 531 NSLTESFTAREKHLLWNKKLHVVRSQWLEDCLAKEQKSEEYEY 573
+S E F A + L KK +++ W+ D L + EE Y
Sbjct: 869 HSRVEEFKAFRRTL--KKKYKILQDLWVTDSLKEGNLQEENCY 909
>gi|432092332|gb|ELK24952.1| DNA ligase 4 [Myotis davidii]
Length = 1021
Score = 223 bits (568), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 159/524 (30%), Positives = 264/524 (50%), Gaps = 36/524 (6%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLII 122
AH EV E I+ R+EGI++K S ++P R WLK+KPEY+ D LD++I+
Sbjct: 518 AHTNKEVIDALNEAIDKREEGIMIKHPLSIYKPDKRGEGWLKIKPEYVNGLMDELDIIIV 577
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
GGY+G G RGG ++ FL A+AE+ A P F + CR+G+G + +EL + KL +++
Sbjct: 578 GGYWGKGARGGMMSHFLCAVAEKHASGEKPSVFHTLCRIGSGYTMKELYDLGLKLAKHWK 637
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
+ K+APPS E+P+V+IE P S+I+ I + + S+++ +LRFPR
Sbjct: 638 PFH--KKAPPSSILF---GTEKPEVYIE-PCNSVIVQIKAS-EIVPSDMYKTGCTLRFPR 690
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSSNG-TTQKGKEYGGLQDDKPKQFRSSRKGEKKNVS 301
I+++R DK WH+C+ + +L ++G K GG DD+P+ + + K V
Sbjct: 691 IEKIREDKEWHECMTLDDLEQLRGKASGKLASKHLSVGG--DDEPQVKKRKAPPKIKKVI 748
Query: 302 IVPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMNLNNSVT 361
+ H ++S++ ++IF D+ F ++ + L + E GG N T
Sbjct: 749 GIIEHLKAPNLSNVNKVSNIFEDVEFCVMSGINGHPKPDLENRIAEFGGYIVQNPGPD-T 807
Query: 362 HCVAADNKGLKYE--AAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEE 419
+CV A ++ ++ + + + DV+ W+L+C K + QP + +H+ S+K+ E
Sbjct: 808 YCVIAGSENIRVKNIISSDKHDVVKPEWLLECFKTKSCVPWQPHFMIHMCPSTKQHFARE 867
Query: 420 VDEFSDLYFWDLDLADIKQLLSNV-DRSED-PKTIDYYKKKYCPQDKWSC-----FHGCC 472
D + D YF D DL +K++ S + D SE PK + + W C F
Sbjct: 868 YDRYGDSYFVDTDLNQLKEVFSGIKDSSEQTPKEMASVIADLECRYSWDCSPLNMFRNHT 927
Query: 473 IY--FYHSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNLA-NATHVVVLSVLGYDVN 529
IY Y L+ E G L LE+ FHG +V + LA +HV++ G D
Sbjct: 928 IYLDLYTVINDLTTKIE---GTRLAITALELRFHGAEVVSRLAKGVSHVII----GED-- 978
Query: 530 FNSLTESFTAREKHLLWNKKLHVVRSQWLEDCLAKEQKSEEYEY 573
+S F A + L +K +++ W+ D + K + +E +Y
Sbjct: 979 -HSRVADFKAFRRTL--KRKFKILQEGWVIDSIDKCELQDENQY 1019
>gi|354466703|ref|XP_003495812.1| PREDICTED: DNA ligase 4-like [Cricetulus griseus]
gi|344243977|gb|EGW00081.1| DNA ligase 4 [Cricetulus griseus]
Length = 912
Score = 223 bits (567), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 154/525 (29%), Positives = 264/525 (50%), Gaps = 31/525 (5%)
Query: 63 VAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLI 121
+A +EV E I+ R+EGI++K S ++P R WLK+KPEY+ D LD+LI
Sbjct: 407 LAQTKNEVVDALNEAIDKREEGIMIKHPLSIYKPDKRGEGWLKIKPEYVSGLMDELDLLI 466
Query: 122 IGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYF 181
+GGY+G G RGG ++ FL A+AE+P P F + CRVG+G + +EL + KL Y+
Sbjct: 467 VGGYWGKGSRGGMMSHFLCAVAEKPPHGEKPSVFHTLCRVGSGYTMKELYDLGLKLAKYW 526
Query: 182 RKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFP 241
+ + K++PPS E+P+V+IE P S+I+ I + + S+++ +LRFP
Sbjct: 527 KPFH--KKSPPSSILC---GTEKPEVYIE-PCNSVIVQIKA-AEIVPSDMYKTGTTLRFP 579
Query: 242 RIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVS 301
RI+++R DK WH+C+ + EL ++G + G DD+P++ R + K
Sbjct: 580 RIEKIRDDKEWHECMTLGDLEELRGKASGKLATKHLHVG-DDDEPREKRRKPVSKMKKTI 638
Query: 302 IVPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMNLNNSVT 361
+ H ++S+I +++F D+ F ++ Y L + E GG N T
Sbjct: 639 GIIEHLKAPNLSNISKVSNVFEDVEFCVMSGLDGYPKSDLENRIAEFGGYIVQNPGPD-T 697
Query: 362 HCVAA--DNKGLKYEAAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEE 419
+CV A +N +K + + DV+ W+L+C K + QP++ +H+ S+K+ E
Sbjct: 698 YCVIAGCENIRVKNIISSDQHDVVKPEWLLECFKTKTCVPWQPRFMIHMCPSTKQHFARE 757
Query: 420 VDEFSDLYFWDLDLADIKQLLSNVDRSEDPKTIDYYKKKYCPQD-KWSCFHGCCIYFYHS 478
D + D YF D DL +K++ + ++ + +T + + ++S H F H
Sbjct: 758 YDCYGDSYFVDTDLDQLKEVFLGIKKAGEHQTPEEMAPVIADLEYRYSWDHSPLCMFRHC 817
Query: 479 TEPLSPDWEVLLGLALRRLK--------LEISFHGGKVCNNLANATHVVVLSVLGYDVNF 530
T L D ++ + ++K LE+ FHG KV ++L+ V++
Sbjct: 818 TVYL--DLYAVINDSSSKIKATRLDVTALELRFHGAKVVSHLSEGVSHVIIG------EN 869
Query: 531 NSLTESFTAREKHLLWNKKLHVVRSQWLEDCLAKEQKSEEYEYSL 575
S F + L KK +++ +W+ D + K + EE +Y L
Sbjct: 870 QSRVSDFKVFRRTL--KKKFKILQERWVTDSVDKGELQEENQYLL 912
>gi|303287939|ref|XP_003063258.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455090|gb|EEH52394.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 1197
Score = 222 bits (566), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 136/408 (33%), Positives = 211/408 (51%), Gaps = 47/408 (11%)
Query: 62 LVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVLI 121
+VA + E+E +F ++ DEG+++KDLGSKWEPG R WLK+KP+Y+ DLDV+I
Sbjct: 542 VVASMLGEIETYFWRAVDRGDEGLIIKDLGSKWEPGARGDSWLKIKPDYLPT-EDLDVVI 600
Query: 122 IGGYYGSGR-RGGEVAQFLVALAERPAPD-TYPRRFISFCRVGTGLSDEELDAVVTKLKP 179
IGG+YG+GR RGG++A++L+ + E P + P R +SF +VGTG+S + + + KL P
Sbjct: 601 IGGFYGTGRQRGGKIAEYLLGIVETPTREGARPTRVMSFSKVGTGMSVDVMQRLREKLGP 660
Query: 180 YF----RKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP 235
+ + Y PP+ Y VT + E PDVWI+ PE S++L++ +DIR +R+ F A
Sbjct: 661 HMLPAGKGYN-----PPTMYDVTGAAAETPDVWIDRPENSVVLTVKADIRLVRTMTFRAD 715
Query: 236 YSLRFPRIDRVRYDKPWHDCLDVQSFVEL---------VHSSNGTTQKGKEYGGLQDDKP 286
SLRFPR+ VR+DKPWHD L + + V + + GG
Sbjct: 716 VSLRFPRVTGVRWDKPWHDALSNEQLAVMQDEGGIGVAVGRAGRFGNRTAAEGGDGAGYA 775
Query: 287 KQFRSSR-KGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDS----L 341
KQ S R K +P+H D S + E +I + + YS + L
Sbjct: 776 KQPSSKRHKAAPARDRRLPAHLAVADTSAVTREGNILRSLDVRILAGGDQYSAGAFKAEL 835
Query: 342 HKMVVENGGTFS------------MNLNNS-----VTHCVA--ADNKGLKYEAAKRRG-- 380
+V GG S + + N+ +TH VA A + +EA KR G
Sbjct: 836 AALVKSQGGKTSEARSIHWSPYDPVRVVNAASHPGLTHVVASPAARGTIAFEAVKRAGGV 895
Query: 381 DVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEVDEFSDLYF 428
DV+ W+ DC ++ ++ + PK+ L ++ ++ +D F D ++
Sbjct: 896 DVLTPQWLRDCVARGEIFEPTPKHRLVTCAATVERSAGAMDRFGDDHY 943
>gi|157824095|ref|NP_001099565.1| DNA ligase 4 [Rattus norvegicus]
gi|149057556|gb|EDM08799.1| rCG42995, isoform CRA_a [Rattus norvegicus]
gi|149057557|gb|EDM08800.1| rCG42995, isoform CRA_a [Rattus norvegicus]
Length = 911
Score = 221 bits (564), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 158/526 (30%), Positives = 260/526 (49%), Gaps = 36/526 (6%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLII 122
A EV + I+ R+EGI++K S ++P R WLK+KPEY+ D LD+LI+
Sbjct: 408 AQTKQEVVDALNDAIDKREEGIMVKHPLSIYKPDKRGEGWLKIKPEYVTGLMDELDLLIV 467
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
GGY+G G RGG ++ FL A+AE P P P F + CRVG+G + +EL + KL Y++
Sbjct: 468 GGYWGKGSRGGMMSHFLCAVAETPPPGDKPSVFHTLCRVGSGYTMKELYDLGLKLAKYWK 527
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
++ +++PPS E+P+V+IE P+ S+I+ I + + S+++ +LRFPR
Sbjct: 528 PFQ--RKSPPSCILC---GTEKPEVYIE-PQNSVIVQIKA-AEIVPSDMYKTGSTLRFPR 580
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSI 302
I+++R DK WHDC+ + +L ++G + G DD+P++ R + K
Sbjct: 581 IEKIRDDKEWHDCMTLDDLEQLRGKASGKLATKHLHIG-DDDEPREKRRKPISKTKKTIG 639
Query: 303 VPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMNLNNSVTH 362
+ H ++S+I +++F D+ F ++ Y L + E GG N T+
Sbjct: 640 IIEHLKAPNLSNINKVSNVFEDVEFCVMSGLDGYPKPDLENKIAEFGGYIVQNPGPD-TY 698
Query: 363 CVAADNKGLKYE--AAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEV 420
CV A ++ ++ + R DV+ W+L+C K + QP++ +H+ S+K+ E
Sbjct: 699 CVIAGSENIRVRNIISSDRHDVVKPEWLLECFKTKTCVPWQPRFMIHMCPSTKQHFAREY 758
Query: 421 DEFSDLYFWDLDLADIKQLLSNVDRSED-------PKTIDYYKKKYCPQDKWSCFHGCCI 473
D + D YF D DL +K++ + SE P D + S F +
Sbjct: 759 DCYGDSYFVDADLDQLKEVFLRIKPSEQQTPEEMAPVIADLECRYSWDHSPLSMFRHYTV 818
Query: 474 Y--FYHSTEPLSPDWEVL-LGLALRRLKLEISFHGGKVCNNLA-NATHVVVLSVLGYDVN 529
Y Y LS E LG+ LE+ F G KV + L+ +HV++ G D
Sbjct: 819 YLDLYAVINDLSSKIEATRLGVT----ALELRFRGAKVVSRLSEGVSHVII----GEDQR 870
Query: 530 FNSLTESFTAREKHLLWNKKLHVVRSQWLEDCLAKEQKSEEYEYSL 575
S ++F K KK +++ +W+ D + K + EE Y L
Sbjct: 871 RVSDFKTFRRTLK-----KKFKILQERWVIDSVDKCELQEENLYLL 911
>gi|348583744|ref|XP_003477632.1| PREDICTED: DNA ligase 4-like [Cavia porcellus]
Length = 911
Score = 221 bits (564), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 159/523 (30%), Positives = 261/523 (49%), Gaps = 34/523 (6%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLII 122
A EV E I+ R+EGI++K S ++P R WLK+KPEY+ D LD+LI+
Sbjct: 408 ARTKKEVIDALNEAIDKREEGIMVKHPLSIYKPDKRGEGWLKIKPEYVNGLMDELDILIV 467
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
GGY+G G RGG ++ FL A+AE+P P F + CRVG+G + +EL + KL Y++
Sbjct: 468 GGYWGKGSRGGMMSHFLCAVAEKPPSGEKPTVFHTLCRVGSGYTMKELYDLGLKLAKYWK 527
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
+ K+APPS E+P+V+IE P S+I+ I + + SE++ +LRFPR
Sbjct: 528 PFH--KKAPPSSILC---GTEKPEVYIE-PCHSVIVQIKA-AEIVPSEMYKTCCTLRFPR 580
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSI 302
I+++R DK WH+C+ + +L ++G K D+PK+ + + K V
Sbjct: 581 IEKIRDDKEWHECMTLDQLEQLGGKASGKLA-SKHLDLDSTDEPKEKKRKTAPKVKKVIG 639
Query: 303 VPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMNLNNSVTH 362
+ H ++S++ ++IF D+ F ++ ++S L + E GG N T+
Sbjct: 640 ILEHLKAPNLSNVSKVSNIFEDVEFCVMSGTVSHSKLDLENRIAEFGGYIVQNPGPD-TY 698
Query: 363 CVAADNKGLKYE--AAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEV 420
CV A ++ ++ + + + DV+ W+L+C K L P++ +H+ S+K+ E
Sbjct: 699 CVIAGSENIRVKNIISSDKHDVVRPEWLLECFKAKTCLPWHPRFMIHMCPSTKQYFAREY 758
Query: 421 DEFSDLYFWDLDLADIKQLLSNVD--RSEDPKTIDYYKKKYCPQDKW-----SCFHGCCI 473
D + D YF + DL +K++ S + ++ P+ + + + W S F I
Sbjct: 759 DCYGDSYFVNTDLTQLKEVFSGIKNPHAQSPEEMASVIAELECRYSWDRSPLSMFRHHTI 818
Query: 474 Y--FYHSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNLA-NATHVVVLSVLGYDVNF 530
Y Y LS + G L LE+ FHG KV + LA +HV++ G D
Sbjct: 819 YLDLYTVVNDLSTS---IKGARLAVTALELRFHGAKVVSCLAEGVSHVII----GED--- 868
Query: 531 NSLTESFTAREKHLLWNKKLHVVRSQWLEDCLAKEQKSEEYEY 573
S F A + L KK +++ W+ D + K + EE Y
Sbjct: 869 QSRVADFKAFRRTL--KKKFKILQVAWVTDSIDKGELEEESRY 909
>gi|328721431|ref|XP_001946729.2| PREDICTED: DNA ligase 4-like [Acyrthosiphon pisum]
Length = 889
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 159/494 (32%), Positives = 252/494 (51%), Gaps = 46/494 (9%)
Query: 57 EPCWSLVAHNV------DEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEY 110
EP + H +E+ K+ + I+N +EGIV+KD S ++P R+ W K+KPEY
Sbjct: 394 EPLEGIFVHTTRHKARKNELMKYLNDAIDNHEEGIVVKDPLSIYKPNSRNAGWYKIKPEY 453
Query: 111 IR-AGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEE 169
A +LD+LIIGG+YG G++ G V+ FL+ L E+ +++ IS RV +G S EE
Sbjct: 454 TDGALIELDLLIIGGFYGEGKKRGVVSHFLMGLLEKDG-ESFKCSAIS--RVSSGFSTEE 510
Query: 170 LDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRS 229
L + KL ++++ YP + PP+ KE+PD+WIE PE S+I+ + + + S
Sbjct: 511 LADLSRKLSSHWQRV-YPGKMPPNIEW----GKEKPDLWIE-PESSVIVQVKA-TEIMTS 563
Query: 230 EVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQF 289
+F + +LRFPRI+RVRYDKPWHDCL V+ F ++ + +GK Y D+
Sbjct: 564 NIFKSKITLRFPRIERVRYDKPWHDCLTVEEFESIIKQT-----EGKLYTSHTDET---- 614
Query: 290 RSSRKGEKKNVSI-VPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVEN 348
+S K +K V++ V FL ++ DI+ ++F D F +N + + K ++E
Sbjct: 615 NTSGKIKKTRVTLTVDKKFLGPNIRDIEFINNMFEDKEFCVLNDSETLNKSEIEKKILEY 674
Query: 349 GGTFSMNLNNSVTHCVAADN-KGLKYEAAKRRG--DVIHYSWVLDCCSQKKLLQLQPKYY 405
GG N N T CV A+N K ++ A K G +I W+L C + + L P+
Sbjct: 675 GGRVVQNPGND-TFCVLANNIKHIRAHAIKLSGKHSIISTKWILSCFTDNEFLNWTPENV 733
Query: 406 LHLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNVDR---------SEDPKTIDYYK 456
L LS + + E+ D++ D Y +LA ++ L +DR +E +++
Sbjct: 734 LFLSKEHQLLMDEKFDQYGDSY---TELATVETLRRAMDRVELDDDLVNTEVDAFLEFQN 790
Query: 457 KKYCPQDKWSCFHGCCIYFYHSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNL-ANA 515
+ + + + F C +YF P L L + F+GG VC N+ N
Sbjct: 791 ELFNEEQCFKIFEKCQVYFDDLNLENLPVRNFHTNTVLEMLIFK--FNGGTVCKNIDNNT 848
Query: 516 THVVVLSVLGYDVN 529
THVV+ S +VN
Sbjct: 849 THVVIHSSSKNNVN 862
>gi|405978527|gb|EKC42907.1| DNA ligase 4 [Crassostrea gigas]
Length = 915
Score = 221 bits (562), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 152/503 (30%), Positives = 240/503 (47%), Gaps = 40/503 (7%)
Query: 76 ETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSGRRGGE 134
E I+ R+EGI++K S + P R G W K+KPEY+ D LDVL++GG++G G R G
Sbjct: 423 EAIDGREEGIMVKKPDSVYRPNTRKGGWFKIKPEYVGGLMDELDVLVVGGFFGVGHRSGM 482
Query: 135 VAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSF 194
++ FL ALA ++P F SFC+VG+G S +EL KL +++ + K+ PPS
Sbjct: 483 MSHFLCALAVPEEDGSHPTVFHSFCKVGSGYSKKELAEFNKKLAEHWKVFN--KKNPPSS 540
Query: 195 YQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHD 254
+ + KE+PD +IE P+ S I+ I + I SE F ++LRFPR+++ R DK W++
Sbjct: 541 IILASGFKEKPDAYIE-PKNSCIVQIKA-AEVIDSERFKTGFTLRFPRVEKFRDDKAWYE 598
Query: 255 CLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVP--------SH 306
C+ V E+ + G GK + R + KK +V +
Sbjct: 599 CMTVPEVQEMKDRAGGKLAGGK----------VELREEEEPTKKKRKVVTHVIRPTLGAQ 648
Query: 307 FLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMNLNNSVTHCVAA 366
F D+SD+ + IF F +N P + S ++ K V E GG+ N S T CV A
Sbjct: 649 FQAADLSDVTQTSKIFEGKEFCVINGPSSLSKAAIEKKVAEYGGSVVQN-PGSTTFCVLA 707
Query: 367 DNKGLKYEAAKRRG--DVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEVDEFS 424
D ++ +R D++ W C + + P +H S ++ L+++ DEF
Sbjct: 708 DKIVMRVTNLMKRDLYDIVKVDWFKRCLDAQTFIPWAPADMIHTSAKTQMALKKDYDEFG 767
Query: 425 DLYFWDLDLADIKQLLSNVDRSEDPKTIDYY---KKKYCPQDK-WSCFHGCCIYFYHSTE 480
D Y D +K ++D SE + D ++KY P D + F C Y +
Sbjct: 768 DSYMQDTTPDQLKYTFQHMDNSEISISTDEMAELEEKYFPDDSPYGLFRTCRFYLDNKLV 827
Query: 481 PLSPDWEVLLGLALRRLKLEISFHGGKVCNNL-ANATHVVVLSVLGYDVNFNSLTESFTA 539
P ++ L L LE+ F GG V ++L +HV+ V+ L+
Sbjct: 828 IGDPSTQI-KDSPLEFLALELRFFGGTVSDSLDKKVSHVM--------VDKRDLSRVQEL 878
Query: 540 REKHLLWNKKLHVVRSQWLEDCL 562
+++ ++K H+V WL CL
Sbjct: 879 KQERRKRSRKFHIVNEDWLRQCL 901
>gi|326913894|ref|XP_003203267.1| PREDICTED: DNA ligase 4-like [Meleagris gallopavo]
Length = 912
Score = 218 bits (556), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 159/502 (31%), Positives = 251/502 (50%), Gaps = 26/502 (5%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLII 122
A EV E I+NR+EGI++KD S ++P R WLK+KPEY+ D LD+LI+
Sbjct: 413 ARTRKEVIDALNEAIDNREEGIMIKDPMSTYKPDKRGEGWLKIKPEYVNGLMDELDLLIV 472
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
GGY+G G RGG ++ FL A+AE PAP+ P F S CRVG+G + +EL + KL +++
Sbjct: 473 GGYWGKGSRGGMMSHFLCAIAETPAPNEKPTAFHSICRVGSGYTMKELYDLGLKLAKHWK 532
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
Y ++ PP E+P+++IE P S+I+ I + + S+++ +LRFPR
Sbjct: 533 PYN--RKDPPCNILC---GTEKPEMYIE-PCNSVIVQIKA-AEIVDSDMYKTDCTLRFPR 585
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSI 302
I+++R DK W++C+ + L + G Y D+ ++ R + KK + I
Sbjct: 586 IEKIREDKEWYECMTLDMLEHLRSRAEGKLASKHLYIDEYDEPQEKKRRTVPKVKKVIGI 645
Query: 303 VPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMNLNNSVTH 362
F D+S++ +S+F D+ F + YS L + E GG+ N T+
Sbjct: 646 A-EQFKAPDLSNVNKVSSVFEDVEFCVMTGTGRYSKSELESKIAECGGSVVQNPGPD-TY 703
Query: 363 C--VAADNKGLKYEAAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEV 420
C V A+N +K A + DV+ W+L C K L+ QP + +H+S +K+ E
Sbjct: 704 CVIVGAENVRVKNIIASNKYDVVKAEWLLQCFQSKMLVPWQPAFMIHMSPDTKEHFAREY 763
Query: 421 DEFSDLYFWDLDLADIKQLLSNV-DRSEDP-KTIDYYKKKYCPQDKWSC-FHGCCIYFYH 477
D + D Y D D+A +K++ S V D P I +++Y C F G IY +
Sbjct: 764 DCYGDSYTADTDVAQLKEVFSRVKDNKRMPLDLIAELEERYSWNSCQLCIFRGNTIYVDY 823
Query: 478 STEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNL-ANATHVVVLSVLGYDVNFNSLTES 536
P ++ G L LE+ F+G KV L +HVV+ G D +S +
Sbjct: 824 YATINKPSTKI-HGTRLSVRALELRFYGAKVVPLLEEGVSHVVI----GED---HSRVKE 875
Query: 537 FTAREKHLLWNKKLHVVRSQWL 558
A + ++ KK +V W+
Sbjct: 876 VKALRR--MFGKKFKIVSELWV 895
>gi|348506808|ref|XP_003440949.1| PREDICTED: DNA ligase 4 [Oreochromis niloticus]
Length = 910
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 145/516 (28%), Positives = 259/516 (50%), Gaps = 26/516 (5%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLII 122
A + EV + I++R+EGI++KD S ++P R WLK+KPEY+ D LD+LI+
Sbjct: 413 ARTMQEVVNALNDAIDSREEGIMVKDPLSIYKPDKRGESWLKIKPEYVDGLMDELDLLIV 472
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
GGY+G GRRGG ++ FL A+AE P P P F + CR+G+G + +EL + KL +++
Sbjct: 473 GGYWGKGRRGGMMSHFLCAVAEAPKPGEKPSVFHTLCRIGSGYTMKELYDLGLKLTKHWK 532
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
Y K PP+ E+P+V+IE P S+I+ + + + S+++ +LRFPR
Sbjct: 533 VYR--KNNPPASILC---GTEKPEVYIE-PCNSVIIQVKA-AEIVGSDMYKTNCTLRFPR 585
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSI 302
I+++R DK WH C+ + + ++G + + + + +P++ + + K V
Sbjct: 586 IEKIRDDKEWHQCMTLAELDQFRSKASG--KLASRHLHIDNGEPQKKKRKLPVKPKKVIG 643
Query: 303 VPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMNLNNSVTH 362
+ HF D+S + ET +F D+ F +N + L K V GG N T+
Sbjct: 644 IIDHFKPQDLSGVTKETDMFEDVEFCILNGTEDHPKSELEKGVARCGGFVVQNPGRD-TY 702
Query: 363 CVAA--DNKGLKYEAAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEV 420
CV A +N +K + + D++ +W+L+C +K+++ QP++ +H+S S+++ +E
Sbjct: 703 CVVAGVENMRVKNLISSNQHDIVWATWLLECLDRKEVVPWQPRHMIHMSPSTREHFAKEY 762
Query: 421 DEFSDLYFWDLDLADIKQLLSNVDRSEDPKTIDYYK--KKYCPQD-KWSCFHGCCIYFYH 477
D + D YF D D ++++ + + ++ K ++ + ++Y D S F Y
Sbjct: 763 DNYGDSYFVDTDEQQLREVFNRISSADVSKEVNVTQVEERYSWDDLPTSMFRPFTAYMDR 822
Query: 478 STEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNLANATHVVVLSVLGYDVNFNSLTESF 537
T+ P + L LE +HGGKV L V+++ ++ +L F
Sbjct: 823 FTDIGDPK-SAIPATCLDTRSLEFRYHGGKVVEKLEEGVSHVIIAEETRLLDLRTLRRCF 881
Query: 538 TAREKHLLWNKKLHVVRSQWLEDCLAKEQKSEEYEY 573
+K +V+ W+ D + + EY
Sbjct: 882 ---------RRKFKIVKETWVTDSIKAGHVMNDTEY 908
>gi|426236659|ref|XP_004012285.1| PREDICTED: DNA ligase 4 [Ovis aries]
Length = 911
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 154/523 (29%), Positives = 260/523 (49%), Gaps = 34/523 (6%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLII 122
AH EV E I+ R+EGI++K S ++P R WLK+KPEY+ D LD+LI+
Sbjct: 408 AHTKKEVIDALNEAIDKREEGIMVKHPLSIYKPDKRGEGWLKIKPEYVSGLMDELDILIV 467
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
GGY+G G RGG ++ FL A+AE+PA P F + CRVG+G + +EL + KL +++
Sbjct: 468 GGYWGKGARGGMMSHFLCAVAEKPASGEKPSVFHTLCRVGSGYTMKELYDLGLKLAKHWK 527
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
+ ++APPS E+P+V+IE P S+I+ + + + S+++ +LRFPR
Sbjct: 528 AFH--RKAPPSNILC---GTEKPEVYIE-PCNSVIVQVKA-TEIVPSDMYKTGCTLRFPR 580
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSI 302
I+++R DK W++C ++ +L + G Y DD+P++ + + K V
Sbjct: 581 IEKIREDKEWYECTSLEDLEQLRGKACGKLASKHLYMS-GDDEPQEKKRKAAPKMKKVIG 639
Query: 303 VPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMNLNNSVTH 362
+ H ++S++ +++F D+ F ++ + L + E GG N T+
Sbjct: 640 IIEHLKAPNLSNVNRVSTVFEDVEFCVMSGTSNHPKPDLENRIAELGGYVVQNPGPD-TY 698
Query: 363 CVAA--DNKGLKYEAAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEV 420
CV A DN +K + + DV+ W+L+C + + QP++ +H+ S+K+ +E
Sbjct: 699 CVIAGSDNIRVKNIISSDKHDVVKPEWLLECFRTRSCVPWQPRFMIHMCPSTKQHFAQEY 758
Query: 421 DEFSDLYFWDLDLADIKQLLSNVDRSED-------PKTIDYYKKKYCPQDKWSCFHGCCI 473
D+F D YF D DL +K++ S + + + P D + S F +
Sbjct: 759 DQFGDSYFVDTDLHRLKEVFSGIKNAGEQTPGEMSPVIADLEHRYSWASMPLSMFRHHTV 818
Query: 474 Y--FYHSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNLA-NATHVVVLSVLGYDVNF 530
Y Y LS + G L LE+ FHG +V + LA +HV+V G D
Sbjct: 819 YLDLYAVINDLSTR---IKGARLAITALELRFHGAQVVSCLAEGVSHVIV----GED--- 868
Query: 531 NSLTESFTAREKHLLWNKKLHVVRSQWLEDCLAKEQKSEEYEY 573
S A + L +K +++ +W+ + K + EE +Y
Sbjct: 869 QSRVADLKAIRRTL--KRKFKILQERWVTVSIDKCELQEENQY 909
>gi|330798081|ref|XP_003287084.1| hypothetical protein DICPUDRAFT_97591 [Dictyostelium purpureum]
gi|325082920|gb|EGC36387.1| hypothetical protein DICPUDRAFT_97591 [Dictyostelium purpureum]
Length = 1076
Score = 217 bits (552), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 146/430 (33%), Positives = 224/430 (52%), Gaps = 42/430 (9%)
Query: 45 LRSQIMAADQTGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWL 104
L+ I D+ E V EV I NR+EG++LKDL S + P +R KW+
Sbjct: 515 LKRCINVKDKQFEISEQTPVSTVQEVLGQLDAAIMNREEGLMLKDLNSFYVPAERKEKWI 574
Query: 105 KLKPEYIRA-GSDLDVLIIGGYYGSG--RRGGEVAQFLVALAERP--APDTYPRR----F 155
K+KPEY+ G D D++IIGGYYGSG RRGG ++ F++ +A P D + F
Sbjct: 575 KIKPEYLDGMGDDFDLVIIGGYYGSGINRRGGTISHFMLGVAYCPDDVVDEESLQEKVVF 634
Query: 156 ISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKS 215
SFC+VG+G +DE+L + +L P++ + K PPS Q+ KE+PDVWI+ + S
Sbjct: 635 YSFCKVGSGYTDEQLKILQKELDPHWSPFNTNK--PPSCIQLAEPFKEKPDVWIDPRKFS 692
Query: 216 IILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELV---------- 265
++ I + + +E + A Y+LRFPR+ ++R DK W DC +EL
Sbjct: 693 KVVQIKA-AQLNPTEKYKAGYTLRFPRVLKIRDDKSWQDCSTFSDILELYKNFQNNDFKF 751
Query: 266 ------HSSNGTTQKGK--EYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTDVSDIKG 317
+S TTQK + E G+ + S G+ K +SI F TD S+I
Sbjct: 752 KTLLNNNSIKTTTQKKRKLEINGISE------AGSGPGKLKVLSI----FQDTDTSNIVP 801
Query: 318 ETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMNLNNSVTHCVAADNKGLKYEAAK 377
+IF + F + Y+ L M+VE GGT N + + TH V + +K +
Sbjct: 802 IQNIFQGLEFCVIKGNQQYTKSKLEIMIVELGGTKVQNPSKNNTHYVIGSKEVVKIQNLI 861
Query: 378 RRG--DVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEVDEFSDLYFWDLDLAD 435
G D++ + WV+DC +++KL+ L PKY + ++S+KKK E D F D YF + + ++
Sbjct: 862 SSGFFDIVLFQWVVDCYNEQKLIPLGPKYMIFTTESTKKKFLLESDPFGDSYFNETNFSE 921
Query: 436 IKQLLSNVDR 445
+K + VD+
Sbjct: 922 LKDCFNQVDK 931
>gi|15778121|dbj|BAB68506.1| DNA ligase IV [Gallus gallus]
Length = 912
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 159/522 (30%), Positives = 258/522 (49%), Gaps = 32/522 (6%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLII 122
A EV E I+NR+EGI++KD S ++P R WLK+KPEY+ D LD+LI+
Sbjct: 413 ARTRKEVIDALNEAIDNREEGIMVKDPMSTYKPDKRGEGWLKIKPEYVNGLMDELDLLIV 472
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
GGY+G G RGG ++ FL A+AE PAP+ P F S CRVG+G + +EL + KL +++
Sbjct: 473 GGYWGKGSRGGMMSHFLCAIAETPAPNEKPTVFHSICRVGSGYTMKELYDLGLKLAKHWK 532
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
Y ++ PP E+P+++IE P S+I+ I + + S+++ +LRFPR
Sbjct: 533 PYN--RKDPPCNILC---GTEKPEMYIE-PCNSVIVQIKA-AEIVNSDMYKTDCTLRFPR 585
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSI 302
I+++R DK W++C+ + L + G Y D+ ++ R + KK + I
Sbjct: 586 IEKIREDKEWYECMTLDMLEHLRSRAEGKLASKHLYIDEYDEPQEKKRRTVPKVKKVIGI 645
Query: 303 VPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMNLNNSVTH 362
F D+S++ +S+F D+ F + YS L + E GG+ N T+
Sbjct: 646 A-EQFKAPDLSNVNKVSSMFEDVEFCVMTGMGRYSKSELESRIAECGGSVVQNPGPD-TY 703
Query: 363 C--VAADNKGLKYEAAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEV 420
C V A+N +K A + DV+ W+L C K L+ QP + +H+S +++ E
Sbjct: 704 CVIVGAENVRVKNIIASNKYDVVKAEWLLQCFQSKMLVPWQPAFMIHMSPETREHFAREY 763
Query: 421 DEFSDLYFWDLDLADIKQLLSNV-DRSEDPKTI-----DYYKKKYCPQDKWSCFHGCCIY 474
D + D Y D D+A +K++ S V D + P + + Y C K F G IY
Sbjct: 764 DCYGDSYTADTDVAQLKEVFSRVKDNKKMPLDLIAELEERYSWNSC---KLCIFRGNTIY 820
Query: 475 FYHSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNL-ANATHVVVLSVLGYDVNFNSL 533
+ P ++ G L LE+ F+G KV L +HVV+ G D +S
Sbjct: 821 VDYYAIINKPSTKI-HGTRLSIRALELRFYGAKVVPLLEEGVSHVVI----GED---HSR 872
Query: 534 TESFTAREKHLLWNKKLHVVRSQWLEDCLAKEQKSEEYEYSL 575
+ A + ++ KK +V W+ + + + E ++ +
Sbjct: 873 VKEMKALRR--MFGKKFKIVSELWVTESVKEGVPKNETQFLI 912
>gi|71895189|ref|NP_001025987.1| DNA ligase 4 [Gallus gallus]
gi|88911289|sp|Q90YB1.2|DNLI4_CHICK RecName: Full=DNA ligase 4; AltName: Full=DNA ligase IV; AltName:
Full=Polydeoxyribonucleotide synthase [ATP] 4
gi|53130782|emb|CAG31720.1| hypothetical protein RCJMB04_10b2 [Gallus gallus]
Length = 912
Score = 216 bits (550), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 159/522 (30%), Positives = 258/522 (49%), Gaps = 32/522 (6%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLII 122
A EV E I+NR+EGI++KD S ++P R WLK+KPEY+ D LD+LI+
Sbjct: 413 ARTRKEVIDALNEAIDNREEGIMVKDPMSTYKPDKRGEGWLKIKPEYVNGLMDELDLLIV 472
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
GGY+G G RGG ++ FL A+AE PAP+ P F S CRVG+G + +EL + KL +++
Sbjct: 473 GGYWGKGSRGGMMSHFLCAVAETPAPNEKPTVFHSICRVGSGYTMKELYDLGLKLAKHWK 532
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
Y ++ PP E+P+++IE P S+I+ I + + S+++ +LRFPR
Sbjct: 533 PYN--RKDPPCNILC---GTEKPEMYIE-PCNSVIVQIKA-AEIVNSDMYKTDCTLRFPR 585
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSI 302
I+++R DK W++C+ + L + G Y D+ ++ R + KK + I
Sbjct: 586 IEKIREDKEWYECMTLDMLEHLRSRAEGKLASKHLYIDEYDEPQEKKRRTVPKVKKVIGI 645
Query: 303 VPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMNLNNSVTH 362
F D+S++ +S+F D+ F + YS L + E GG+ N T+
Sbjct: 646 A-EQFKAPDLSNVNKVSSMFEDVEFCVMTGMGRYSKSELESRIAECGGSVVQNPGPD-TY 703
Query: 363 C--VAADNKGLKYEAAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEV 420
C V A+N +K A + DV+ W+L C K L+ QP + +H+S +++ E
Sbjct: 704 CVIVGAENVRVKNIIASNKYDVVKAEWLLQCFQSKMLVPWQPAFMIHMSPETREHFAREY 763
Query: 421 DEFSDLYFWDLDLADIKQLLSNV-DRSEDPKTI-----DYYKKKYCPQDKWSCFHGCCIY 474
D + D Y D D+A +K++ S V D + P + + Y C K F G IY
Sbjct: 764 DCYGDSYTADTDVAQLKEVFSRVKDNKKMPLDLIAELEERYSWNSC---KLCIFRGNTIY 820
Query: 475 FYHSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNL-ANATHVVVLSVLGYDVNFNSL 533
+ P ++ G L LE+ F+G KV L +HVV+ G D +S
Sbjct: 821 VDYYAIINKPSTKI-HGTRLSIRALELRFYGAKVVPLLEEGVSHVVI----GED---HSR 872
Query: 534 TESFTAREKHLLWNKKLHVVRSQWLEDCLAKEQKSEEYEYSL 575
+ A + ++ KK +V W+ + + + E ++ +
Sbjct: 873 VKEMKALRR--MFGKKFKIVSELWVTESVKEGVPKNETQFLI 912
>gi|440898658|gb|ELR50104.1| DNA ligase 4, partial [Bos grunniens mutus]
Length = 916
Score = 215 bits (547), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 150/523 (28%), Positives = 260/523 (49%), Gaps = 34/523 (6%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLII 122
AH EV E I+ R+EGI++K S ++P R WLK+KPEY+ D LD+LII
Sbjct: 413 AHTKKEVIDALNEAIDKREEGIMVKHPLSIYKPDKRGEGWLKIKPEYVNGLMDELDILII 472
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
GGY+G G RGG ++ FL A++E+P P F + CRVG+G + +EL + KL +++
Sbjct: 473 GGYWGKGARGGMMSHFLCAVSEKPPSGEKPSVFHTLCRVGSGYTMKELYDLGLKLAKHWK 532
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
+ ++APPS E+P+V+IE P S+I+ + + + S+++ +LRFPR
Sbjct: 533 PFH--RKAPPSNILC---GTEKPEVYIE-PCNSVIVQVKA-TEIVPSDMYKTGCTLRFPR 585
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSI 302
I+++R DK W++C ++ +L + G Y G DD+P++ + + K V
Sbjct: 586 IEKIREDKEWYECTSLEDLEQLRGKACGKLASRHLYLG-GDDEPQEKKRKAAPKMKKVIG 644
Query: 303 VPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMNLNNSVTH 362
+ H ++S++ +++F D+ F ++ ++ L + E GG N T+
Sbjct: 645 IIEHLKAPNLSNVNRVSTVFEDVEFCVMSGTSSHPKPDLENRIAELGGYIVQNPGPD-TY 703
Query: 363 CVAADNKGLKYE--AAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEV 420
CV A ++ ++ + + + DV+ W+L+C + + QP++ +H+ S+K+ +E
Sbjct: 704 CVIAGSENIRVKNIISSDKHDVVKPEWLLECFRTRSCVPWQPRFMIHMCPSTKQHFAQEY 763
Query: 421 DEFSDLYFWDLDLADIKQLLSNVD-------RSEDPKTIDYYKKKYCPQDKWSCFHGCCI 473
D++ D YF D DL +K++ + R P D + + S F +
Sbjct: 764 DQYRDSYFVDTDLHQLKEVFLGIKNAGEQTPREMSPVIADLEHRYSWARAPLSMFRHLTV 823
Query: 474 Y--FYHSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNLA-NATHVVVLSVLGYDVNF 530
Y Y LS + G L LE+ FHG +V + LA +HV+V G D
Sbjct: 824 YLDLYAVINDLSTR---IKGARLAITALELRFHGAQVVSCLAEGVSHVIV----GED--- 873
Query: 531 NSLTESFTAREKHLLWNKKLHVVRSQWLEDCLAKEQKSEEYEY 573
S A + L +K +++ +W+ + K + EE Y
Sbjct: 874 QSRVADLKAIRRTL--KRKFKILQERWVTVSIDKCELQEENRY 914
>gi|300798388|ref|NP_001178055.1| DNA ligase 4 [Bos taurus]
gi|296481593|tpg|DAA23708.1| TPA: ligase IV, DNA, ATP-dependent [Bos taurus]
Length = 911
Score = 214 bits (545), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 149/523 (28%), Positives = 260/523 (49%), Gaps = 34/523 (6%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLII 122
AH EV E I+ R+EGI++K S ++P R WLK+KPEY+ D LD+LII
Sbjct: 408 AHTKKEVIDALNEAIDKREEGIMVKHPLSIYKPDKRGEGWLKIKPEYVNGLMDELDILII 467
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
GGY+G G RGG ++ FL A++E+P P F + CRVG+G + +EL + KL +++
Sbjct: 468 GGYWGKGARGGMMSHFLCAVSEKPPSGEKPSVFHTLCRVGSGYTMKELYDLGLKLAKHWK 527
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
+ ++APPS E+P+V+IE P S+I+ + + + S+++ +LRFPR
Sbjct: 528 PFH--RKAPPSNILC---GTEKPEVYIE-PCNSVIVQVKA-TEIVPSDMYKTGCTLRFPR 580
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSI 302
I+++R DK W++C ++ +L + G Y G DD+P++ + + K V
Sbjct: 581 IEKIREDKEWYECTSLEDLEQLRGKACGKLASRHLYLG-GDDEPQEKKRKAAPKMKKVIG 639
Query: 303 VPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMNLNNSVTH 362
+ H ++S++ +++F D+ F ++ ++ L + E GG N T+
Sbjct: 640 IIEHLKAPNLSNVNRVSTVFEDVEFCVMSGTSSHPKPDLENRIAELGGYIVQNPGPD-TY 698
Query: 363 CVAADNKGLKYE--AAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEV 420
CV A ++ ++ + + + DV+ W+L+C + + QP++ +H+ S+K+ +E
Sbjct: 699 CVIAGSENIRVKNIISSDKHDVVKPEWLLECFRTRSCVPWQPRFMIHMCPSTKQHFAQEY 758
Query: 421 DEFSDLYFWDLDLADIKQLLSNVDRSED-------PKTIDYYKKKYCPQDKWSCFHGCCI 473
D++ D YF D DL +K++ + + + P D + S F +
Sbjct: 759 DQYGDSYFVDTDLHQLKEVFLGIKNAGEQTPGEMSPVIADLEHRYSWASAPLSMFRHLTV 818
Query: 474 Y--FYHSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNLA-NATHVVVLSVLGYDVNF 530
Y Y LS + G L LE+ FHG +V + LA +HV+V G D
Sbjct: 819 YLDLYAVINDLSTR---IKGARLAITALELRFHGAQVVSCLAEGVSHVIV----GED--- 868
Query: 531 NSLTESFTAREKHLLWNKKLHVVRSQWLEDCLAKEQKSEEYEY 573
S A + L +K +++ +W+ + K + EE Y
Sbjct: 869 QSRVADLKAIRRTL--KRKFKILQERWVTVSIDKCELQEENRY 909
>gi|156615336|ref|XP_001647535.1| predicted protein [Nematostella vectensis]
gi|156214768|gb|EDO35746.1| predicted protein [Nematostella vectensis]
Length = 907
Score = 213 bits (543), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 168/560 (30%), Positives = 268/560 (47%), Gaps = 64/560 (11%)
Query: 45 LRSQIMAADQTGEPCWSLV-------AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPG 97
L ++ + +PC + A + +EV K E I+ R+EG+V+K S ++P
Sbjct: 374 LHERLKLLETVFKPCLGFLQFVERQNASSNEEVIKSLNEAIDRREEGLVVKSRDSVYKPN 433
Query: 98 DRSGK-WLKLKPEYIRAGSD-LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTY---- 151
R+G WLK+KPEY+ + SD LDV+I+GGY+G GRR G V+ FL A+A P
Sbjct: 434 VRNGGGWLKIKPEYVASLSDDLDVVIVGGYFGVGRRQGMVSHFLCAVA---VPSDRRGEK 490
Query: 152 PRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIES 211
P +F S C+VG+G + ELD + +LKP+++ + K PP T KE+PDVWIE
Sbjct: 491 PSQFYSLCKVGSGYTMNELDELGQQLKPHWQPFNQAK--PPKSVCFTPGFKEKPDVWIE- 547
Query: 212 PEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNG- 270
P KS ++ I + SE + A ++LRFPR++ VR+DK W+DCLD+ +L+ + G
Sbjct: 548 PSKSKVVQIKA-AEITPSEKYRAGFTLRFPRLECVRHDKSWYDCLDLSGLEQLLKKAEGK 606
Query: 271 TTQKGKEYGGLQDDKPKQFRSSRK-GEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFYF 329
T + G K+ R+++K E+ +S+ P F ++VS + + +F F
Sbjct: 607 LTSRHTSLGEESAPAKKRSRTTQKRAEQMRMSVAP-QFKPSEVSTVAKVSKLFEGKEFCI 665
Query: 330 VNVPPAYSLDSLHKMV--VENGGTFSMNLNNSVTHCVAADNKGLKYEAAKRRGDVIHYSW 387
V P + SL KM+ V + G S ++ + V D R DV+ +W
Sbjct: 666 VTGPATHPKPSLEKMITQVRSFGRVSWIISYFI---VCRDG----------RFDVVQAAW 712
Query: 388 VLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNVDRS- 446
++DC +Q KLL QP LH S ++ K +EE D D + D +K + N+ S
Sbjct: 713 LIDCMNQAKLLPWQPAQMLHTSSATTAKFREEYDRHGDSFTCDATADSLKTVFHNIANSI 772
Query: 447 -------EDPKTIDYYKKKYCPQDK-WSCFHGCCIY-FYHSTEPLSPDWEVLLGLALRRL 497
K I +++Y P + F C + Y + +V+ +L
Sbjct: 773 KQLPSATITAKEIADIEQRYFPASTPHNLFRTCSVLNIYQLVQSF---LQVIPDCSLELT 829
Query: 498 KLEISFHGGKVCNNL-ANATHVVVLSVLGYDVNFNSLTESFTAREKHLLWN--KKLHVVR 554
LE+ HG + THVV F+ S + ++ N KK H V
Sbjct: 830 ALELRCHGAHIQERFDETVTHVV----------FDDRDLSRLPTYQQIMRNRPKKHHFVT 879
Query: 555 SQWLEDCLAKEQKSEEYEYS 574
+W+ + E+ E +++
Sbjct: 880 EKWVTQSIGNERILSERQFA 899
>gi|449277604|gb|EMC85707.1| DNA ligase 4 [Columba livia]
Length = 912
Score = 213 bits (541), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 145/467 (31%), Positives = 239/467 (51%), Gaps = 23/467 (4%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLII 122
A EV E I+NR+EGI++KD S ++P R WLK+KPEY+ D LD+LI+
Sbjct: 413 ARTRKEVIDALNEAIDNREEGIMVKDPMSTYKPDKRGEGWLKIKPEYVNGLMDELDLLIV 472
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
GGY+G G RGG ++ FL A+AE P P+ P F S CRVG+G + +EL + KL +++
Sbjct: 473 GGYWGKGSRGGMMSHFLCAIAETPPPNEKPTIFHSICRVGSGYTMKELYDLGLKLAKHWK 532
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
Y +R PP E+P+++IE P S+I+ I + + S+++ +LRFPR
Sbjct: 533 PYH--RRDPPGNILC---GTEKPEMYIE-PCNSVIVQIKA-AEIVNSDMYKTDCTLRFPR 585
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSI 302
I+++R DK W++C+ +L + G K + D+P++ + + + +
Sbjct: 586 IEKIREDKEWYECMTSTMLEDLRSKAEGKLA-SKHLHIEEYDEPQEKKRKTVSKVRKIIG 644
Query: 303 VPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMNLNNSVTH 362
+ F D+S++ +++F D+ F + Y+ L + E GG+ N T+
Sbjct: 645 IAEQFKAPDLSNVSKVSNMFEDVEFCVMTGMGKYTKSELESRIAECGGSVVQNPGPE-TY 703
Query: 363 C--VAADNKGLKYEAAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEV 420
C V A+N +K A + DV+ W+L C K L+ QP + +H+S +K+ E
Sbjct: 704 CVIVGAENVRVKNIIASNKYDVVRAEWLLQCFQTKMLVPWQPAFMIHMSPDTKEHFAREY 763
Query: 421 DEFSDLYFWDLDLADIKQLLSNVDRSE--DPKTIDYYKKKYCPQD-KWSCFHGCCIY--- 474
D + D Y D D+A +K++ S + +E I +++Y + S F G IY
Sbjct: 764 DCYGDSYTADTDVAQLKEVFSRMKDNEVMPSDMIAELEERYSWNSCRLSIFRGNTIYVDC 823
Query: 475 FYHSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNLANA-THVVV 520
+ EP + + G L LE+ F+G V ++L +HVVV
Sbjct: 824 YAVVNEPRTK----IQGTTLSIRALELRFYGAIVVSHLEEGISHVVV 866
>gi|196002285|ref|XP_002111010.1| hypothetical protein TRIADDRAFT_50031 [Trichoplax adhaerens]
gi|190586961|gb|EDV27014.1| hypothetical protein TRIADDRAFT_50031 [Trichoplax adhaerens]
Length = 924
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 163/525 (31%), Positives = 256/525 (48%), Gaps = 44/525 (8%)
Query: 74 FKETIENRDEGIVLKDLGSKWEPGDRSGK-WLKLKPEYIRAGSD-LDVLIIGGYYGSGRR 131
E I+ R+EGI++K+ S ++P R G W K+KPEY+ + SD LD+LIIGGY+G GRR
Sbjct: 414 LNEAIDTREEGIIIKNPISTYKPDQRKGSGWFKIKPEYVDSLSDQLDLLIIGGYFGVGRR 473
Query: 132 GGEVAQFLVALAERPA-PDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRA 190
GG ++ FL+ +A P P +P+ F SFC+VG+G + EL + KLKPY++ PK+
Sbjct: 474 GGLISHFLLGVAVPPENPSEHPKVFQSFCKVGSGYTIAELKELGEKLKPYWKPMN-PKKL 532
Query: 191 PPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDK 250
PP F ++ E+PD+WIE P S I+ I + ++ F +LR+PR++ VR DK
Sbjct: 533 PPYFQLMS----EKPDLWIE-PIHSKIVQIKAAEIVPSTDKFKCNCTLRYPRVELVREDK 587
Query: 251 PWHDCLDVQSFVELVHSSNG--TTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFL 308
W++C+D+ +L + G Q E P + R + V + F
Sbjct: 588 YWYECMDLDELDQLKSIAEGRLAYQHADETSETLMFGPSKKRQKANIRPETVCTIAPQFR 647
Query: 309 QTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMNLNNSVTHCVAADN 368
D+SD+ + +FS F V+ P S+ K +VENGGTF N T CV D
Sbjct: 648 TADISDV---SQVFSGKEFCVVSGPKHNPKASVEKRIVENGGTFVQNPGME-TFCVITDR 703
Query: 369 KGLKYE--AAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEVDEFSDL 426
K ++ ++ DV+ W+LD + + L+ QP +H S + + +E D++ D
Sbjct: 704 KTIRARNIISQNIYDVVKVDWLLDSLAAGRCLEWQPNQVIHSSPKTAEVFAKEYDKYGDS 763
Query: 427 YFWDLD-LADIKQLLSNVDRSED------PKTIDYYKKKYCPQDK-WSCFHGCCIYF--Y 476
Y D+D +K + ++ +D K I + +Y P + F C YF Y
Sbjct: 764 YTKDIDNPVALKAIFDKINNEDDLVSTATQKEICDVEMRYFPDESPLGLFRRCRAYFDWY 823
Query: 477 HSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNL-ANATHVVVLSVLGYDVNFNSLTE 535
+ D + L + L ++GG + + L + TH+V F+
Sbjct: 824 RQVD---NDATRIRDSPLDLIGLNFRYYGGTISSILDRHVTHIV----------FDPSDL 870
Query: 536 SFTAREKHLLWNKKL--HVVRSQWLEDCL-AKEQKSEEYEYSLKP 577
S + + L N+KL H V S+W+ + A Q SE L P
Sbjct: 871 SRMQKLRKLDKNRKLLRHFVGSEWVTASIDAASQLSERNYEPLMP 915
>gi|18029886|gb|AAL56554.1|AF393656_1 DNA ligase IV [Xenopus laevis]
Length = 911
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 151/510 (29%), Positives = 253/510 (49%), Gaps = 29/510 (5%)
Query: 74 FKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSGRRG 132
E I+ R+EGI++KD S ++P R WLK+KPEY+ D LD+LIIGGY+G G RG
Sbjct: 423 LNEAIDKREEGIMVKDPMSIYKPDKRGEGWLKIKPEYVNGLMDELDLLIIGGYWGKGSRG 482
Query: 133 GEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPP 192
G ++ FL +AE P P F S CRVG+G + EEL + KL P+++ Y KR PP
Sbjct: 483 GMMSHFLCGVAEASGPGEKPSVFHSICRVGSGYTMEELFDLGLKLAPHWKTYR--KRDPP 540
Query: 193 SFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPW 252
S E+P+V+I+ P S+IL I + + S+++ +LRFPRI+++R DK W
Sbjct: 541 SNILC---GIEKPEVFIQ-PCNSVILQIKA-AEIVSSDMYKTGCTLRFPRIEKIREDKEW 595
Query: 253 HDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTDV 312
H+C+ + + ++G + ++ + D+ ++ R + KK + IV SH D+
Sbjct: 596 HECMTLDDLEQFRDKASG--KLASKHLDVDDEPHEKKRKTAPKLKKVIGIV-SHLKAPDL 652
Query: 313 SDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMNLNNSVTHCVAA--DNKG 370
S++ E+S+F+++ F ++ +S L ++ + GG N + T+CV A +N
Sbjct: 653 SNVHHESSMFTEVEFCVMSGTDQHSKADLENIIAKCGGIVVQN-PGADTYCVIAGIENVR 711
Query: 371 LKYEAAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEVDEFSDLYFWD 430
+K + DV+ +W+L+C K ++ QP + +H+ S+ + E D + D Y D
Sbjct: 712 VKNVICSNKHDVVRAAWLLECFENKTVVPWQPHHMIHMCPSTAEHFACEYDCYGDSYVTD 771
Query: 431 LD---LADIKQLLSNVDRSEDPKTIDYYKKKYC-PQDKWSCFHGCCIYFYHSTEPLSPDW 486
L D+ +S + + + +++Y ++ F C +Y P
Sbjct: 772 TSEYPLRDVFHRMSKIKEKIPFEMMANLEERYSWNNSSYNIFRHCTVYVDSFATINDPTT 831
Query: 487 EVLLGLALRRLKLEISFHGGKVCNNL-ANATHVVVLSVLGYDVNFNSLTESFTAREKHLL 545
+ +L LE+ FHG K+ N L +HV+V + + L + T R
Sbjct: 832 RINTS-SLNIRALELRFHGAKLVNQLDEGISHVLVSE------DLSRLEQIKTMRRA--- 881
Query: 546 WNKKLHVVRSQWLEDCLAKEQKSEEYEYSL 575
KK +V W+ D + E Y L
Sbjct: 882 MAKKFKIVSVSWVLDSVKMRVPQMENAYLL 911
>gi|390337384|ref|XP_787257.3| PREDICTED: DNA ligase 4 [Strongylocentrotus purpuratus]
Length = 929
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 157/518 (30%), Positives = 259/518 (50%), Gaps = 33/518 (6%)
Query: 69 EVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYG 127
EV + E I+ R+EGIV+K S + P R LK+KPEY+ D LD+LI+GGY+G
Sbjct: 427 EVVEALNEAIDKREEGIVVKHPESTYRPDKRKVVGLKIKPEYVDNLMDELDLLIVGGYFG 486
Query: 128 SGRRGGEVAQFLVALAERPAPDT-YPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEY 186
G R ++ FL ALA P+ + +P+ F SFC+VG+G + +EL KL +++KY+
Sbjct: 487 KGYRSQLISHFLCALAVPPSREGDHPKIFYSFCKVGSGYTLQELLDFNQKLAKHWKKYD- 545
Query: 187 PKRAPPSFYQVTNNSKERPDVWIESPEKSIILSI-TSDIRTIRSEVFSAPYSLRFPRIDR 245
K PP + Q T +E+P++++E P+ S I+ + ++I + S V+ +LRFPR+++
Sbjct: 546 -KENPPRWLQCT---REKPELYVE-PQHSFIVQVKATEINS--SNVYRTGCTLRFPRLEK 598
Query: 246 VRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSI-VP 304
VR DK WH C+ + + + G + + + DD+ + + + + + VP
Sbjct: 599 VRDDKDWHQCMTTEEMENMRQQAEG--KLTGRHVNVDDDEIVTTKRRKATSRAVIPVAVP 656
Query: 305 SHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMNLNNSVTHCV 364
S F D S++K + + +N P ++ D L K +VE GG N T+CV
Sbjct: 657 SRFRAADTSNVKQTSEMLEGRELCIMNSPASHPKDQLEKKIVECGGLVVQNPGID-TYCV 715
Query: 365 AADNKGLKYEA--AKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEVDE 422
AD LK + + + DV+ SW+++ +LL P + L S + + D
Sbjct: 716 LADKVNLKVKNIFSAKIYDVVKTSWLIESLDAGRLLPWLPSHMLFTSAKMTAQFALDYDC 775
Query: 423 FSDLYFWDLDLADIKQLLSNVD--RSEDPKT---IDYYKKKYCPQDKWSCFHGCCIYFYH 477
D Y D++ ++++ +NV+ +S+ P T I + Y PQD C +
Sbjct: 776 HGDSYTQDVNEEKLREVFANVEKKKSKQPMTAEQIAEIEMDYFPQDSLLGLFRLCRVYMD 835
Query: 478 STEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNL-ANATHVVVLSVLGYDVNFNSLTES 536
S + + + +L + LE+ FHG +C L TH++V D + S
Sbjct: 836 SCLVIGEEDTHIKDCSLDLVSLEMRFHGATMCPMLDRQVTHIIV------DKSDLSRVRE 889
Query: 537 FTAR-EKHLLWNKKLHVVRSQWLEDCLAKEQKSEEYEY 573
F R +K L K HVV S+W+ DC+ KE+ E Y
Sbjct: 890 FRLRGQKRAL---KQHVVTSEWVRDCIQKEKFLSERPY 924
>gi|321464185|gb|EFX75195.1| hypothetical protein DAPPUDRAFT_323605 [Daphnia pulex]
Length = 845
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 150/515 (29%), Positives = 257/515 (49%), Gaps = 32/515 (6%)
Query: 69 EVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYG 127
EVE E I+ R+EGIVLK S ++P +R G W+K+KPEY+ D LDV+I+GGY+G
Sbjct: 351 EVENLLNEAIDQREEGIVLKSPDSIYKPNERKGGWVKVKPEYVGDMMDHLDVIILGGYHG 410
Query: 128 SGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYP 187
GRR ++ FL+ LA P+ + F SF RVG+G SDE+L ++ KL PY++K++
Sbjct: 411 QGRRRNLISMFLLGLAV-PSIEGNQLEFYSFARVGSGFSDEQLMGLLGKLDPYWQKWD-- 467
Query: 188 KRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVR 247
K APP +E+PDVWI +P S IL I + + S + A +LRFPR+ R+R
Sbjct: 468 KNAPPPMIHF---GREKPDVWI-NPSSSAILEIKAS-EIVLSNSYKAGMTLRFPRVQRIR 522
Query: 248 YDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHF 307
D+ W C+ + +E+ ++G + + +D P R G ++V + F
Sbjct: 523 EDRAWDSCMTLSEVIEMRKYASG--KLATRHCSFTEDTPASKRIKLAGL---TAVVAAPF 577
Query: 308 LQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMNLNNSVTHCVAAD 367
D SD+K +S FS +N + + L + VV GGT N + VT C+ A
Sbjct: 578 QSADTSDVKKSSSCFSKKEICVLNGSDSLTKQELERKVVSGGGTVVQNPGH-VTFCIVAF 636
Query: 368 NKGLKYEAAKRRG--DVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEVDEFSD 425
++ ++ K R D++ W+L C + +L+ +P+ + + ++++K+ + D+F +
Sbjct: 637 KDDMRVKSLKNRPKWDIVRPPWLLRCLNFDRLVPFRPEDLMIATRATEEKMMQNYDKFGN 696
Query: 426 LYFWDLDLADIKQLLSNVDRSEDPKTIDYYK------KKYCPQDKWSCFHGCCIYFYHST 479
+ D+ +L V E P + Y+ + + K+ F C +Y
Sbjct: 697 SLREPTSVEDVALILQRVQDLEHPTPLSMYEIANLEYEIFGQLPKYGIFRTCVVYVDLFE 756
Query: 480 EPLSPDWEVLLGLALRRLKLEISFHGGKVCNNL-ANATHVVVLSVLGYDVNFNSLTESFT 538
P+ +V + L + ++ +G +V N + ++ THVV V ++ T
Sbjct: 757 TISDPNSQV-ISRELEIISFDLRIYGAQVFNRMDSSVTHVVCDPV---SYPHRAIDWKTT 812
Query: 539 AREKHLLWNKKLHVVRSQWLEDCLAKEQKSEEYEY 573
++ + K +VR +W+E + K +E +Y
Sbjct: 813 NHQREV----KFKLVRLEWVEHSINKGSLVDEMQY 843
>gi|224043062|ref|XP_002198469.1| PREDICTED: DNA ligase 4 [Taeniopygia guttata]
Length = 911
Score = 209 bits (531), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 155/520 (29%), Positives = 256/520 (49%), Gaps = 32/520 (6%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLII 122
A EV E I+NR+EGI++KD S ++P R WLK+KPEY+ D LD+LI+
Sbjct: 412 ARTRKEVIDALNEAIDNREEGIMVKDPMSTYKPDKRGEGWLKIKPEYVNGLMDELDLLIV 471
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
GGY+G G RGG ++ FL A+AE P P+ P F S CRVG+G + +EL + KL +++
Sbjct: 472 GGYWGKGSRGGMMSHFLCAVAETPPPNEKPTIFHSICRVGSGYTMKELYDLGLKLAKHWK 531
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
Y ++ PP E+P+++IE P S+I+ I + + S+++ +LRFPR
Sbjct: 532 PYH--RKDPPGNILC---GAEKPEMYIE-PCNSVIVQIKA-AEIVDSDMYKTDCTLRFPR 584
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSI 302
I+++R DK W++C+ +L + + G K + D+P + + + + V
Sbjct: 585 IEKIREDKEWYECMTSDMLEDLRNKAQGKL-ASKHLRIDEYDEPHEKKRKTVSKVRKVIG 643
Query: 303 VPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMNLNNSVTH 362
+ F D+S + +++F D+ F + YS L + + GG+ N T+
Sbjct: 644 IAEQFKAPDLSSVSKVSNVFEDVEFCVMTGMGKYSKSELESRIAQCGGSVVQNPGPE-TY 702
Query: 363 C--VAADNKGLKYEAAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEV 420
C V A+N +K A + DV+ W+L C K L+ QP + +H+ +K+ E
Sbjct: 703 CVIVGAENVRVKNIIASNKYDVVRAEWLLQCFQTKMLVPWQPAFMIHMCPDTKEHFAREY 762
Query: 421 DEFSDLYFWDLDLADIKQLLSNV-DRSEDP-KTIDYYKKKYCPQD-KWSCFHGCCIY--- 474
D + D Y + D+ +K++ S + DR P I +++Y + + F G IY
Sbjct: 763 DCYGDSYTANTDVTQLKEVFSRMKDRKAIPLDLIAELEERYWWNNCQLGMFRGSTIYVDC 822
Query: 475 FYHSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNL-ANATHVVVLSVLGYDVNFNSL 533
+ EP S + G L LE+ F+G KV ++L +HV+V G D S
Sbjct: 823 YAVVNEPQSK----IPGTTLSIRALELRFYGAKVVSHLEEGVSHVIV----GEDC---SR 871
Query: 534 TESFTAREKHLLWNKKLHVVRSQWLEDCLAKEQKSEEYEY 573
E A + + KK +V W+ + + E +Y
Sbjct: 872 VEEMKALRR--TFGKKFKIVSELWVTHSVEEGVAKNENQY 909
>gi|62859221|ref|NP_001016981.1| DNA ligase (ATP) 4 [Xenopus (Silurana) tropicalis]
gi|89271325|emb|CAJ82384.1| ligase IV, DNA, ATP-dependent [Xenopus (Silurana) tropicalis]
gi|134026052|gb|AAI35342.1| ligase IV, DNA, ATP-dependent [Xenopus (Silurana) tropicalis]
Length = 911
Score = 207 bits (528), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 148/509 (29%), Positives = 251/509 (49%), Gaps = 27/509 (5%)
Query: 74 FKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSGRRG 132
E I+ R+EGI++KD S ++P R WLK+KPEY+ D LD++IIGGY+G G RG
Sbjct: 423 LNEAIDKREEGIMVKDPMSIYKPDKRGEGWLKIKPEYVNGLMDELDLIIIGGYWGKGSRG 482
Query: 133 GEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPP 192
G ++ FL +AE P P F S CRVG+G + +EL + KL P+++ Y KR PP
Sbjct: 483 GMMSHFLCGVAEASGPGEKPSVFHSICRVGSGYTMKELFDLGLKLAPHWKTYR--KRDPP 540
Query: 193 SFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPW 252
S E+P+ +I+ P S+I+ I + + S+++ +LRFPRI+++R DK W
Sbjct: 541 SNILC---GIEKPEAYIQ-PCNSVIVQIKA-AEIVTSDMYKTGCTLRFPRIEKIREDKEW 595
Query: 253 HDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTDV 312
+DC+ + + ++G + DD+P + + + K V + SH D+
Sbjct: 596 YDCMTLDDLEQFRDKASGKLASKHLH---IDDEPHEKKRKTAPKLKKVIGIVSHLKAPDL 652
Query: 313 SDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMNLNNSVTHCVAA--DNKG 370
S++ E+S+F+++ F ++ +S D L ++ + GG N + T+CV A +N
Sbjct: 653 SNVYQESSVFAEVEFCVMSGTDTHSKDDLANIIAKCGGIGVQN-PGADTYCVIAGTENVR 711
Query: 371 LKYEAAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEVDEFSDLYFWD 430
+K + DV+ +W+L+C K + QP + +H+ S+ + E D + D Y D
Sbjct: 712 VKNIICSNKHDVVKAAWLLECFESKTFVPWQPHHMIHMCPSTAEHFACEYDCYGDSYITD 771
Query: 431 ---LDLADIKQLLSNVDRSEDPKTIDYYKKKYCPQDKWSCFHGCCIYFYHSTEPLSPDWE 487
L ++ +SN+ + + +++Y + F C + S ++
Sbjct: 772 TSEYQLREVFHRMSNIREKIPFEMMADLEERYSWNNSSHSFFRHCTVYVDSFATINDPTT 831
Query: 488 VLLGLALRRLKLEISFHGGKVCNNLANA-THVVVLSVLGYDVNFNSLTESFTAREKHLLW 546
+ +L LE+ F+G K+ N L +HVVV G D+ + L + T R
Sbjct: 832 RINTSSLNLRALELRFYGAKLVNQLEEGISHVVV----GEDL--SRLEQMKTMRRA---I 882
Query: 547 NKKLHVVRSQWLEDCLAKEQKSEEYEYSL 575
KK +V W+ D + E Y L
Sbjct: 883 AKKFKIVSVSWVLDSVKMRVPQMENSYLL 911
>gi|320170076|gb|EFW46975.1| ATP dependent DNA ligase [Capsaspora owczarzaki ATCC 30864]
Length = 1199
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 132/429 (30%), Positives = 217/429 (50%), Gaps = 35/429 (8%)
Query: 41 MLSQLRSQIMAADQTGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRS 100
+ + + +IM ADQ E+ F E I+NR+EG+++K++ S + P R
Sbjct: 492 VFTPITGRIMFADQR-------TGTTSQEIIDFLNEAIDNREEGVMVKNMKSTYAPDKRD 544
Query: 101 GKWLKLKPEYIRAGSDLDVLIIGGYYGSG-RRGGEVAQFLVALAERPA-PDTYPRRFISF 158
G W K+KPEY + ++LDVLI+GGYYG G RRGG V+ F+ A+A PA P P F SF
Sbjct: 545 GGWYKIKPEYGDSFAELDVLIVGGYYGIGKRRGGMVSHFMCAVAVPPANPQEPPTVFHSF 604
Query: 159 CRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIIL 218
C+VGTG S +L +L+P++ ++ + PPS + KERPDVWIE P S I+
Sbjct: 605 CKVGTGYSMSQLKEFGEQLEPHWHPFD--TQNPPSQILLATGFKERPDVWIE-PRHSRIV 661
Query: 219 SITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDV----------QSFVELVHSS 268
I + +E + ++LRFPR++ R DK W DC+ Q + H
Sbjct: 662 QIRA-AEITPTEKYKCGFTLRFPRLECFRTDKEWSDCMTTTELDHAYRVGQGRLATTHFL 720
Query: 269 NGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFY 328
+G +KG K K + V + F D+S +K ++ +F + FY
Sbjct: 721 SGDGEKGGR-------KQKAGGAGVAAGTSKTRTVLASFRGADLSGVKIDSELFQGLTFY 773
Query: 329 FVNVPPAYSLDSLHKMVVENGGTFSMNLNNS-VTHCVAADN--KGLKYEAAKRRG--DVI 383
VN + L K++ +GG N S V H VA + + ++ + K G D++
Sbjct: 774 VVNGSADRDKNELEKLIARHGGELIQNPPRSQVAHVVAIAHQEQAVRVKNIKAAGVCDIV 833
Query: 384 HYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNV 443
SW+ +C +K+++ +P + ++ ++ ++ + D F D YF D D A ++ + +++
Sbjct: 834 RPSWIDECVKEKRVVPKRPTMLIFATELTRVEVAKFFDAFGDSYFEDTDEATLRTVFASM 893
Query: 444 DRSEDPKTI 452
+ PK +
Sbjct: 894 ATPDPPKGV 902
>gi|148235991|ref|NP_001081114.1| DNA ligase (ATP) 4 [Xenopus laevis]
gi|49256305|gb|AAH74385.1| Lig4-A protein [Xenopus laevis]
Length = 911
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 149/510 (29%), Positives = 253/510 (49%), Gaps = 29/510 (5%)
Query: 74 FKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSGRRG 132
E I+ R+EGI++KD S ++P R WLK+KPEY+ D LD+LIIGGY+G G RG
Sbjct: 423 LNEAIDKREEGIMVKDPMSIYKPDKRGEGWLKIKPEYVNGLMDELDLLIIGGYWGKGSRG 482
Query: 133 GEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPP 192
G ++ FL +AE P P F S CRVG+G + +EL + KL P+++ Y KR PP
Sbjct: 483 GMMSHFLCGVAEASGPGEKPSVFHSICRVGSGYTMKELFDLGLKLAPHWKTYR--KRDPP 540
Query: 193 SFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPW 252
S E+P+V+I+ P S+IL I + + S+++ +LRFPRI+++R DK W
Sbjct: 541 SNILC---GIEKPEVFIQ-PCNSVILQIKA-AEIVSSDMYKTGCTLRFPRIEKIREDKEW 595
Query: 253 HDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTDV 312
++C+ + + ++G + ++ + D+ ++ R + KK + IV SH D+
Sbjct: 596 YECMTLDDLEQFRDKASG--KLASKHLDVDDEPHEKKRKTAPKLKKVIGIV-SHLKAPDL 652
Query: 313 SDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMNLNNSVTHCVAA--DNKG 370
S++ E+S+F+++ F ++ +S L ++ + GG N + T+CV A +N
Sbjct: 653 SNVHQESSMFTEVEFCVMSGTDQHSKADLENIIAKCGGIVVQN-PGADTYCVIAGIENVR 711
Query: 371 LKYEAAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEVDEFSDLYFWD 430
+K + DV+ +W+L+C K ++ QP + +H+ S+ + E D + D Y D
Sbjct: 712 VKNVICSNKHDVVRAAWLLECFENKTVVPWQPHHMIHMCPSTAEHFACEYDCYGDSYVTD 771
Query: 431 LD---LADIKQLLSNVDRSEDPKTIDYYKKKYC-PQDKWSCFHGCCIYFYHSTEPLSPDW 486
L D+ +S + + + +++Y ++ F C +Y P
Sbjct: 772 TSEYPLRDVFHRMSKIKEKIPFEMMANLEERYSWNNSSYNIFRHCTVYVDSFATINDPTT 831
Query: 487 EVLLGLALRRLKLEISFHGGKVCNNL-ANATHVVVLSVLGYDVNFNSLTESFTAREKHLL 545
+ +L LE+ FHG K+ N L +HV+V + + L + T R
Sbjct: 832 RINTS-SLNIRALELRFHGAKLVNQLDEGISHVLVSE------DLSRLEQIKTMRRA--- 881
Query: 546 WNKKLHVVRSQWLEDCLAKEQKSEEYEYSL 575
KK +V W+ D + E Y L
Sbjct: 882 MAKKFKIVSVSWVLDSVKMRVPQMENAYLL 911
>gi|335297113|ref|XP_003131137.2| PREDICTED: DNA ligase 4-like [Sus scrofa]
Length = 910
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 148/523 (28%), Positives = 254/523 (48%), Gaps = 35/523 (6%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLII 122
AH EV E I+ R+EGI++K S ++P R WLK+KPEY+ D LD+LI+
Sbjct: 408 AHTKKEVIDALNEAIDKREEGIMIKYPLSIYKPDKRGEGWLKIKPEYVNGLMDELDILIV 467
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
GGY+G G RGG ++ FL A+AE+P P F + CRVG+G + +EL + KL +++
Sbjct: 468 GGYWGKGARGGMMSHFLCAVAEKPPAGEKPSVFHTLCRVGSGYTMKELYDLGLKLAKHWK 527
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
+ ++APP E+P+V+IE P S+I+ + + + S+++ +LRFPR
Sbjct: 528 PFH--RKAPPGSILC---GTEKPEVYIE-PCNSVIVQVKA-AEIVPSDMYKTGCTLRFPR 580
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSI 302
I+++R DK WH+C + L + G Y G D++P++ + + K V
Sbjct: 581 IEKIREDKEWHECTTLDDLEHLRGKAAGKLASKHLYVG--DEEPQEKKRKAAPKAKKVIG 638
Query: 303 VPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMNLNNSVTH 362
+ H ++S+I +++F D+ F + ++ L + E GG N T+
Sbjct: 639 IIEHLKAPNLSNINKVSNMFEDVEFCVMTGSDSHPKPDLESRIAEFGGYIVQNPGPD-TY 697
Query: 363 CVAADNKGLKYE--AAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEV 420
CV A ++ ++ + + DV+ W+L+C ++ QP++ +H+ S+K+ +
Sbjct: 698 CVIAGSENIRVRNIISSNKHDVVKPEWLLECFRTQRCAPWQPRFMVHMCPSTKQHFARQY 757
Query: 421 DEFSDLYFWDLDLADIKQLLSNVD-------RSEDPKTIDYYKKKYCPQDKWSCFHGCCI 473
D D YF D D+ +K++ S + R P D + + S F +
Sbjct: 758 DCHGDSYFVDTDVNQLKEVFSGIKTPGEQTPREMAPVIADLEHRYAWDRAPLSMFRPHTV 817
Query: 474 Y--FYHSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNLA-NATHVVVLSVLGYDVNF 530
Y Y S E G L LE+ FHG +V ++LA +HV++ G D
Sbjct: 818 YPDLYAVINDPSTKIE---GTRLAITALELQFHGAEVVSHLAEGVSHVII----GED--- 867
Query: 531 NSLTESFTAREKHLLWNKKLHVVRSQWLEDCLAKEQKSEEYEY 573
+S A + L +K ++ +W + + K + EE +Y
Sbjct: 868 HSRLADLKAFRRTL--KRKFKILPERWAIESIDKCELQEENQY 908
>gi|326427734|gb|EGD73304.1| hypothetical protein PTSG_05019 [Salpingoeca sp. ATCC 50818]
Length = 660
Score = 201 bits (512), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 164/560 (29%), Positives = 257/560 (45%), Gaps = 91/560 (16%)
Query: 63 VAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVLII 122
+ + D+ KF I+ R+EG+++KDL SK+ G R W+K KPEY+ +D L++
Sbjct: 83 IGRSNDDFLKFANAAIDEREEGVMIKDLDSKYLLGRRDKAWMKWKPEYVDTLADDLDLLV 142
Query: 123 -GGYYGSG-RRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPY 180
GGY+G G RR G ++ FL+A+AE P P P F +FC+VGTG S ++L + +L+P+
Sbjct: 143 VGGYHGEGTRRSGGISHFLLAVAEPPQPGEKPTMFNTFCKVGTGYSLKQLREIQARLRPH 202
Query: 181 FRKYEYPKR----------APPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSE 230
++ + R A P F KE+PDVWIE PE+SII+ + + +E
Sbjct: 203 WKTFNTDPRNMSMSRKVRLAMPGF-------KEKPDVWIE-PEESIIVQVKA-AEICPTE 253
Query: 231 VFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNG-TTQKGKEYGGLQDDKPKQF 289
F+A ++LRFPR+ R R DK W +C+ + L ++G + E D K
Sbjct: 254 KFAARFTLRFPRLQRFRLDKNWWECMLQTELMPLYDRASGKIAHRALEDHHFNADNGKL- 312
Query: 290 RSSRKGEKKNVSI-VPSHFLQTDVSDIKGETSIFSDMVFYFVNVPP----AYSLDSLHKM 344
+++ ++ S V HF D+SDIK ++ IFS + + + S + +
Sbjct: 313 -KAKRAKRTTASFRVAEHFKAADLSDIKEKSKIFSGLRLRVIGIDRITRRVMSKQDIERK 371
Query: 345 VVENGGTFSMNLNNSVTHCVAADNKGLKYEAAKRRGDVIHYSWVLDCCSQKKLLQLQPKY 404
+ E GGT V +D + + A + D++ SWVLDCC L PKY
Sbjct: 372 IKEFGGTPVQRYEEGVLPV--SDMENITVRALPQDIDIVKTSWVLDCCRLGLRLAFNPKY 429
Query: 405 YLHLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNVDRSEDPKTIDYYKKKYCPQDK 464
L S ++ + L+E+VD F D Y DL D ++L+ + DK
Sbjct: 430 LLRTSTATAEALKEQVDAFGDSYEEDLTEEDFDEMLARL------------------TDK 471
Query: 465 WSCFHGCCIYFYHSTEPLSPDWEVLLGL---------------------ALRRLKLEISF 503
H H TE + E GL +R+ LE+ F
Sbjct: 472 QHTTHPAFPLLSH-TELAEVEVEYTTGLQPLRLARVFLDMDKGPAGEYSTVRKTGLEVLF 530
Query: 504 HGGKVCNNL-ANATHVVV-----LS-VLGYDVNFNSLTESFTAREKHLLWNKKLHVVRSQ 556
GG+V + L THV+V LS V YD F W ++ VV
Sbjct: 531 LGGQVMDKLDRTCTHVLVDEQGDLSRVAEYDSLFRD-------------WPQRPKVVGCA 577
Query: 557 WLEDCLAKEQKSEEYEYSLK 576
W+++C+ ++ +E + +K
Sbjct: 578 WVKECVKLNREVDEAGFMVK 597
>gi|340369284|ref|XP_003383178.1| PREDICTED: DNA ligase 4-like [Amphimedon queenslandica]
Length = 942
Score = 198 bits (504), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 144/497 (28%), Positives = 238/497 (47%), Gaps = 21/497 (4%)
Query: 74 FKETIENRDEGIVLKDLGSKWEPGDRSGK-WLKLKPEYIRAGSDLDVL-IIGGYYGSGRR 131
E I+ R+EG+V+K S ++P R G WLK+KP+Y+ + SD L IIGGY+G GRR
Sbjct: 440 LNEAIDRREEGLVIKQPSSLYKPDKRKGSGWLKIKPDYVDSLSDDLDLLIIGGYFGVGRR 499
Query: 132 GGEVAQFLVALAERPA-PDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRA 190
G ++ F+ +A PA P F SFC+VG+G + EL + KLKP++RK++ +
Sbjct: 500 AGMISHFMCGVAVPPAIKGDKPTVFHSFCKVGSGYTMNELRELGHKLKPHWRKFD--TKR 557
Query: 191 PPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDK 250
PP + KE+PD+WIE + I+ ++I I S+ + +LRFPR++RVR DK
Sbjct: 558 PPESVILAPGFKEKPDLWIEPKDAKIVQIRAAEI--IVSDKYRTGCTLRFPRLERVREDK 615
Query: 251 PWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQT 310
W DC+ + +L ++G G ++ + R + V S F T
Sbjct: 616 EWFDCMSLDELEDLKRVASGHLAHRHYEEGEGEELTTSKKRRRVTRIDRPAGVASQFRHT 675
Query: 311 DVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMNLNNSVTHCVAADNKG 370
DVS ++ +S+F+ F +N P++S + + E+GGTF N T+CV
Sbjct: 676 DVSSVEEVSSMFAGKQFCVINGTPSFSKQYIETKIAEHGGTFVQNPTTD-TYCVLVHKLV 734
Query: 371 LKYEAAKRRG--DVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEVDEFSDLYF 428
+K +G +V+ W+LDC + L L+P S + K E D++ D Y
Sbjct: 735 VKANNIISKGIYNVVMIQWLLDCLETGRCLPLKPSLMYSTSSETASKFSEIYDKYGDSYI 794
Query: 429 WDLDLADIKQLLSNV--DRSEDPKTIDYYKKKYCPQDKWSCFHGCCIYFYHSTEPLSPDW 486
D ++++ + RS I + +Y P + +++ E ++
Sbjct: 795 HDTSETTLREIFDKMKDKRSCSADEIAKMEFEYFPNESAKGLFRHFKFYFDKYEVINDPS 854
Query: 487 EVLLGLALRRLKLEISFHGGKVCNNL-ANATHVVVLSVLGYDVNFNSLTESFTAREKHLL 545
V++ +L +L+ GG V ++ + THVV + + L + R K
Sbjct: 855 TVIINSSLSLPELDARLCGGTVTDDFNESVTHVV--------FDKSDLQRLSSLRLKQKS 906
Query: 546 WNKKLHVVRSQWLEDCL 562
KK H + S W+ C+
Sbjct: 907 HAKKSHFITSDWISACI 923
>gi|241830535|ref|XP_002414818.1| DNA ligase IV, putative [Ixodes scapularis]
gi|215509030|gb|EEC18483.1| DNA ligase IV, putative [Ixodes scapularis]
Length = 817
Score = 195 bits (495), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 126/376 (33%), Positives = 193/376 (51%), Gaps = 18/376 (4%)
Query: 72 KFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGR 130
+F E+IE +EG+VLK + S ++P R WLKLKPEY+ + SDLD+L+IGGY+G GR
Sbjct: 415 RFLNESIERMEEGVVLKSVSSVYKPNSRKAGWLKLKPEYVDSLVSDLDLLVIGGYFGEGR 474
Query: 131 RGGEVAQFLVALA-ERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKR 189
RGG+V+ FL+ +A + A D P F S +VG+G SD EL+ + ++L P ++ Y+ R
Sbjct: 475 RGGDVSHFLLGVAGDERAEDGTPVCFWSVAKVGSGYSDSELEHLRSRLTPKWKVYD--PR 532
Query: 190 APPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYD 249
PP + KE+PD+++E P +S++L + + T RS F +LRFPR+ VRYD
Sbjct: 533 KPPERVVLAPGHKEKPDLYVE-PCESVVLQVKASELT-RSAQFRTGITLRFPRVSAVRYD 590
Query: 250 KPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQ 309
KPWHD L EL + G L DD S K + +V + HF
Sbjct: 591 KPWHDALSFADLTELDRVAGGKLAT----TALNDDG-----SPAKRTRLSVPTIAPHFRP 641
Query: 310 TDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMNLNNSVTHCVAADNK 369
D+S + ++ V S L ++VVE+GGT N T CV A+
Sbjct: 642 ADLSKTATKLNVLDGKEICVVTGCGGRSKQDLERIVVESGGTPVQNPREG-TFCVVAEKI 700
Query: 370 GLKYE--AAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEVDEFSDLY 427
K K+ DV+ L C +++ +P+ L S ++++L+ DE+ D Y
Sbjct: 701 NFKVSNLVQKKLWDVVKAERFLACLEAQRVDLWEPRDLLARSADTERRLKAAFDEWGDSY 760
Query: 428 FWDLDLADIKQLLSNV 443
+ ++ L +
Sbjct: 761 TVPVTAESLRDLFEAI 776
>gi|66801093|ref|XP_629472.1| DNA ligase IV [Dictyostelium discoideum AX4]
gi|74850906|sp|Q54CR9.1|DNL4_DICDI RecName: Full=DNA ligase 4; AltName: Full=DNA ligase IV; AltName:
Full=Polydeoxyribonucleotide synthase [ATP] 4
gi|60462855|gb|EAL61054.1| DNA ligase IV [Dictyostelium discoideum AX4]
Length = 1088
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 146/495 (29%), Positives = 252/495 (50%), Gaps = 40/495 (8%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI----RAGSDLDV 119
+++ ++ + I NR+EG++LK+L S + P +R KW+K+KPEYI DLD+
Sbjct: 555 VNSISQIISLLESAIINREEGLMLKNLHSLYVPAERKDKWVKIKPEYIDGMGNGADDLDL 614
Query: 120 LIIGGYYGSG--RRGGEVAQFLVA---LAERPAPD-----TYPRR--FISFCRVGTGLSD 167
+IIGGYYGSG RRGG ++ F++ +A+ D T+ + F SFC+VG+G +D
Sbjct: 615 VIIGGYYGSGLNRRGGTISHFMLGVPFIADSTDTDIDDESTFDKNVIFYSFCKVGSGYTD 674
Query: 168 EELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTI 227
+L ++ L P++ + K PPS Q+ KE+PDVWI+ S +L I + + +
Sbjct: 675 IQLKSLQKDLDPHWNNFSTSK--PPSIIQLAEPFKEKPDVWIDPRVYSKVLQIKAS-QIV 731
Query: 228 RSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELV--HSSNGTTQKGKEYGGLQDDK 285
++ + Y+LRFPR+ ++R DK W DC + ++L +S+N ++ EYG K
Sbjct: 732 VTDKYKCGYTLRFPRVLKIRDDKGWKDCCSHEEIIDLFTNYSTNLNFKRDHEYGDGSGGK 791
Query: 286 PKQFRSSRKGEKKNVS----IVPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPA-YSLDS 340
K+ + S+K + ++ V S F TD S I +IF + + Y+
Sbjct: 792 NKKLKKSKKTTNQLLADSGLKVLSIFQDTDTSGIIPTQNIFQGIEICVIKGSSGEYTKSK 851
Query: 341 LHKMVVENGGTFSMNLNNSVTHCVAADNKGLKYEAAKRRG--DVIHYSWVLDCCSQKKLL 398
L M+VE GG+ + + T+ V + + +K + + G D++ ++W++DC ++K+L+
Sbjct: 852 LEIMIVEMGGS-KVQYPSRNTNYVISSKEVVKIQNLIQSGFIDIVSFNWIVDCYNEKRLV 910
Query: 399 QLQPKYYLHLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNVDRSEDPKTIDYYK-- 456
L PKY + ++S+KK+ + D+F D Y + +K + +D+ + K +
Sbjct: 911 PLGPKYMIFSTESTKKRFLLDSDQFGDSYINETTEQSLKDSFNQIDKLKLKKQLSINSTT 970
Query: 457 -------KKYCPQDKWSCFHGCCIYFYHSTEPLSPDWEVLLGLALRRLKLEISFHGGKVC 509
KY WS F Y + + ++ L L I F+GGK+
Sbjct: 971 TTTTTSISKYFSNCWWSLFKEFTFYL-DLYQVVGEKSTLIENNNLELSNLNIQFYGGKIS 1029
Query: 510 NNLAN-ATHVVVLSV 523
N THVV+ S+
Sbjct: 1030 IEFNNKITHVVLDSL 1044
>gi|47216720|emb|CAG00994.1| unnamed protein product [Tetraodon nigroviridis]
Length = 896
Score = 192 bits (489), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 147/520 (28%), Positives = 251/520 (48%), Gaps = 39/520 (7%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLII 122
A + EV K E I++R+EGI++KD S ++P R WLK+KPEY+ D LD+LI+
Sbjct: 404 ARSTQEVVKALNEAIDSREEGIMVKDPLSIYKPDKRGEGWLKIKPEYVDGLMDELDLLIV 463
Query: 123 GGYYG--SGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPY 180
GGY+G S RR V L P P P F + CR+G+G + +EL + KL +
Sbjct: 464 GGYWGKRSARRDD------VPLPA-PKPGEKPSVFHTLCRIGSGYTMKELYDLGLKLAKH 516
Query: 181 FRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRF 240
++ + K PP+ E+P+V+IE P S+I+ + + + S+++ +LRF
Sbjct: 517 WKVFR--KSDPPASILC---GTEKPEVYIE-PRNSVIIQVKA-AEIVSSDMYKTSCTLRF 569
Query: 241 PRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNV 300
PRI+R+R DK WH+C+ + + ++G + + + DD P++ + + K
Sbjct: 570 PRIERIREDKEWHECMTLAQLEQFRGKASG--KLASRHLLMDDDDPQKKKRRVPFKPKKA 627
Query: 301 SIVPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMNLNNSV 360
+ HF D+S ++ ET +F D+ F +N +S L K V GG N
Sbjct: 628 VGLLEHFKAQDLSGVRKETDMFEDVEFCILNGTEDHSKSELEKGVARCGGIAVQNPGRD- 686
Query: 361 THCVAA--DNKGLKYEAAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQE 418
T+CV A +N +K + DV+ +W+L+C QK+++ QP++ +H+S S+++ +
Sbjct: 687 TYCVVAGVENMRVKNLILSDQHDVVRAAWLLECLEQKEVVPWQPRHMIHMSPSTREHFAK 746
Query: 419 EVDEFSDLYFWDLDLADIKQLLSNVDRSEDPKTIDYYK-KKYCPQDKW--SCFHGCCIYF 475
E D + D YF D D ++++ + + ++ ++ C D S F +Y
Sbjct: 747 EYDVYGDSYFVDSDEGQLREVFGRMRGPDGAAAASAWQVEQRCGWDDLPTSLFRPFRVYA 806
Query: 476 YHSTEPLSPDWEVLLG-LALRRLKLEISFHGGKVCNNL-ANATHVVVLSVLGYDVNFNSL 533
P + L++R LE+ FHGG V L +HV+V
Sbjct: 807 DAYAVIGDPRSAIPASRLSIR--ALELRFHGGTVAQALEEGVSHVLV----------EEE 854
Query: 534 TESFTAREKHLLWNKKLHVVRSQWLEDCLAKEQKSEEYEY 573
T R + KK +VR W+ + + ++ +Y
Sbjct: 855 TRVADLRAARRSFRKKFKIVRDSWVTESIKAGHLMDDNDY 894
>gi|290990672|ref|XP_002677960.1| ATP-dependent DNA ligase IV [Naegleria gruberi]
gi|284091570|gb|EFC45216.1| ATP-dependent DNA ligase IV [Naegleria gruberi]
Length = 1059
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 146/494 (29%), Positives = 233/494 (47%), Gaps = 60/494 (12%)
Query: 78 IENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVA 136
I NRDEGI+LK G + PG+R KW+KLKP+++ G LDV+I+GG+YG+ + V+
Sbjct: 529 IMNRDEGIMLKPTGGVYIPGER--KWIKLKPDHVDGMGETLDVIIVGGFYGTKFKRKSVS 586
Query: 137 QFLVALAERP--------APDTYPRR---------FISFCRVGTGLSDEELDAVVTKLKP 179
FL+A+A R A D F SFC+VG+G ++ EL A+ L+
Sbjct: 587 HFLLAVATRSKHSLGNTDALDNLDEENEASNENQVFHSFCKVGSGYTNIELLALQKDLES 646
Query: 180 YFRKYEYPKRAPPSFY-QVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSL 238
+++ ++ K P FY Q + E PDV+IE P+ S IL I S F +L
Sbjct: 647 HWKPFD--KTKLPKFYGQWIPGAGEMPDVYIE-PKHSKILEIKG-YSFQESTKFKTGVTL 702
Query: 239 RFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGK--------EYGGLQDDKPKQFR 290
RFPR+ +R DK W++CLD+Q E++ S K + + ++ K K+
Sbjct: 703 RFPRVVSIRNDKDWNECLDLQGLEEMIEISRNGNHKRRAANMDSVVSHNDIKKQKRKKMV 762
Query: 291 SSRKG-------EKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHK 343
+ G + + + SHF D+S + +S+F + F N S + +
Sbjct: 763 QNPDGTFTEVEPKSRKATAAVSHFFDYDMSKLDKTSSLFKGLEFVVFNGDEHKSKYDIEQ 822
Query: 344 MVVENGGTFSMNLNNSVT-HCVAADNKGLKYE-----AAKRRG-----DVIHYSWVLDCC 392
++V N GT N N+ + +AA+ + + R+ D+IHY W+++
Sbjct: 823 LIVSNSGTKVQNPNDHKNQYLIAANTNNITVRNWISSSQNRKNPLGDRDIIHYKWLIESV 882
Query: 393 SQKKLLQLQPKYYLHLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNVDRSE----- 447
L + P Y ++ S ++ +E++DEF D Y +D + ++ L S
Sbjct: 883 IYGSLQRFHPGYMIYTSQATLLSFKEQMDEFQDEYLFDATVESLRNSLQLASLSSKYFVL 942
Query: 448 DPKTIDYYKKKYCPQDKWSCFHGCCIYFYHSTEPLS-PDWEVLLGLALRRLKLEISFHGG 506
D K ID +Y + + F + F E P E++LGL L++ I HGG
Sbjct: 943 DSKQIDMINSRYEIKTSQTSFFKGVVAFIDKYEKFGDPSSELILGLD--TLEVYIRLHGG 1000
Query: 507 KVCNNLAN-ATHVV 519
KV N L TH+V
Sbjct: 1001 KVSNLLTTEVTHIV 1014
>gi|328876528|gb|EGG24891.1| DNA ligase IV [Dictyostelium fasciculatum]
Length = 1012
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 124/367 (33%), Positives = 189/367 (51%), Gaps = 47/367 (12%)
Query: 102 KWLKLKPEYIRA-GSDLDVLIIGGYYGSG--RRGGEVAQFLVALAERPAPDTYPRR---- 154
KW+K+KPEY+ G DLD++IIGGYYGSG RRGG V+ F++ + + PD
Sbjct: 477 KWIKIKPEYLDGVGDDLDLVIIGGYYGSGVGRRGGTVSHFMLGVQVK-DPDLQLSNSSSD 535
Query: 155 ---FISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIES 211
F SFC+VG+G SDEEL + L+P++ Y +PPS + +E+PD+WI+
Sbjct: 536 TPLFYSFCKVGSGYSDEELKKLQKALEPHWMPYR--TSSPPSHILLAEPHREKPDLWID- 592
Query: 212 PEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGT 271
P S +L I + + + +E + Y+LRFPR+ ++R DKPW +CLD + + L G
Sbjct: 593 PRVSKVLQIKA-AQILPTEKYRTGYTLRFPRVIKIRDDKPWDECLDFGAMLSLATEFEGR 651
Query: 272 TQKGKEYGGLQ----------------------DDKPKQFRSSRKGEKKNVSIVPSHFLQ 309
K K G D P S+ KG+KK + S F
Sbjct: 652 YAKRKYTMGDDGDGDGGGGGGGRKTKRKKKTNPDGTP--IASTAKGKKKTTLL--SIFQD 707
Query: 310 TDVSDIKGETSIFSDMVFYFVNVPPAYSLDS----LHKMVVENGGTFSMNLNNSVTHCVA 365
TD S I +IF + F +N SL + L ++VENGGT + + T V
Sbjct: 708 TDTSHILPSNNIFMGVEFCVINGDSRTSLVASKARLETLIVENGGTKVQYPSPATTKYVV 767
Query: 366 ADNKGLKYEAAKRRG--DVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEVDEF 423
+ + +K + G D++HY W+LDC + K+L L PKY ++ ++ +K+ L +++D F
Sbjct: 768 SSREVVKIQNLIHDGHFDIVHYQWLLDCIQEGKVLPLSPKYMIYTTNKTKQLLLQDIDRF 827
Query: 424 SDLYFWD 430
D + D
Sbjct: 828 GDSFTQD 834
>gi|116207608|ref|XP_001229613.1| hypothetical protein CHGG_03097 [Chaetomium globosum CBS 148.51]
gi|88183694|gb|EAQ91162.1| hypothetical protein CHGG_03097 [Chaetomium globosum CBS 148.51]
Length = 968
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 143/546 (26%), Positives = 260/546 (47%), Gaps = 53/546 (9%)
Query: 62 LVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVL 120
+ A + DE+E + + EG+VLK+ S+++ R+ W+K+KPEY+ G LD++
Sbjct: 439 ITAKSADEIEPHLRVIVAEASEGLVLKNPRSRYQLNSRNNDWIKVKPEYMSEFGESLDLV 498
Query: 121 IIGGYYGSGRRGGEVAQFLVALA-----ERPAPDTYPRRFISFCRVGTGLSDEELDAVVT 175
+IGGY+GSGRRGG ++ FL L R + +SFC+VG G E+ +
Sbjct: 499 VIGGYWGSGRRGGTLSSFLCGLRVSENFVRSGAAASREKCLSFCKVGGGFKAEDYGEMRH 558
Query: 176 KLKPYFRKYEYPKRAPPSFYQVTNNSK---ERPDVWIESPEKSIILSITSDIRTIRSEVF 232
+ +++++ P P F ++ + ERPDVWI P +S+++SI + S+ F
Sbjct: 559 HTEGKWKEWD-PASPPSEFIELGGGERLQYERPDVWIR-PSESVVISIKAS-SFAPSDQF 615
Query: 233 SAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSS 292
+A ++LRFPR ++R DK W +DV L Q+ KE ++ + K R
Sbjct: 616 AAGWTLRFPRFRKMRLDKAWDAGMDVDESEAL---RTKVKQEEKERKAMEMESRK--RKP 670
Query: 293 RKGEKKNVSIVPSHFLQTDVSDI----KGETSIFSDMVFYFVN---VPPAYSLDSLHKMV 345
K +KK++ I + ++ K +T++F + F ++ P + +L K++
Sbjct: 671 AKRQKKDLVIAGAADAAKQTAEFLAVKKPKTNVFQGLDFCVLSEVLKPKKMTKPNLEKLL 730
Query: 346 VENGGTFSMNLNNSVTHCVAADNKGLKYEAAKRRG--DVIHYSWVLDCCSQKK----LLQ 399
ENGG +N + AD +K + K+ G D++ WV DC Q LL
Sbjct: 731 KENGGKLHQTVNKESGMILLADKNVVKVASLKKAGDADIVRPKWVFDCLEQTGGEGYLLP 790
Query: 400 LQPKYYLHLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNVDRSEDPKT------ID 453
+ + LH ++ K+ Q+ D++ D Y D+ + +++ +L +D ++ + +D
Sbjct: 791 FEESHLLHATEEMKRVAQKSTDQYGDSYARDVGVDELRAILDGMDLPDESEGFVADQFLD 850
Query: 454 YYKKKYCPQD--KWSCFHGCCIYFYHSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNN 511
+++ D K F C ++F E + RL + F G V +
Sbjct: 851 QLEERGNGLDGLKSFMFRRCRVHFALG--------EGVSAAGALRLASYVRFGNGGVVED 902
Query: 512 LAN--ATHVVVLSVLGYDVNFNSLTESFTAREKHLLWNKKL--HVVRSQWLEDCLAKEQK 567
+ + THVV V+G + + + A +H + ++ VV ++W+EDC ++
Sbjct: 903 IGDERITHVV---VVGGREDTAASEKVVAADVRHKISARRAVPRVVSARWVEDCWKEDTL 959
Query: 568 SEEYEY 573
+E +Y
Sbjct: 960 VDEEQY 965
>gi|281207702|gb|EFA81882.1| DNA ligase IV [Polysphondylium pallidum PN500]
Length = 1051
Score = 177 bits (448), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 158/569 (27%), Positives = 265/569 (46%), Gaps = 65/569 (11%)
Query: 3 FELFAQLMTLSVLHDKDNA----CNISTVAMNDGICVCVHVYMLSQ----LRSQIMAADQ 54
+E F +L TL++ DN C I+ + G V + LSQ L+ I A
Sbjct: 448 YEEFGKLKTLALNQTVDNVGKQLCFIAFDVLYVGDKSVVEL-PLSQRYAILKRCISAKSH 506
Query: 55 TGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA- 113
E V + E+ + I R+EGI++K L S + PG+R KW+KLKPEY+
Sbjct: 507 QFEVSEHRVCSSKQEIVQLLDAAILAREEGIMVKRLDSVYTPGERRDKWIKLKPEYLDGV 566
Query: 114 GSDLDVLIIGGYYGSG--RRGGEVAQFLVALAERPAPDTYPRR-------FISFCRVGTG 164
G DLD++I+GGYYGSG RRGG ++ F++ + E + F SFC+VG+G
Sbjct: 567 GDDLDLVIVGGYYGSGVGRRGGTISHFILGVPELLEQQEGEEQQQKQLVTFKSFCKVGSG 626
Query: 165 LSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDI 224
+D EL + +L P+++K P Q ERPDV+I+ P S +L I +
Sbjct: 627 YTDSELRTLQERLTPHWQK------RPLGNVQF---GTERPDVYID-PTASFVLQIKA-A 675
Query: 225 RTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 284
+ + +E + ++LRFPR+ ++R DK W +CLD + L + G K K +QD
Sbjct: 676 QIVITEKYKVGFTLRFPRVVKIRDDKQWSECLDEAGVISLANEYEGRYAKRK--IEIQDG 733
Query: 285 KPKQFRSSRKGEKKNVSI-VPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHK 343
K + R + +K I V F TD + + ++ +F + F V +S L
Sbjct: 734 KSTKKRRTSTTKKPKKKIGVLQCFEDTDTTGVVKQSGLFEGLEFCVVKGDRQHSKAMLEI 793
Query: 344 MVVENGGTFSMNLNNSVTHCVAADNKGLKYEAAKRRG--DVIHYSWVLDCCSQKKLLQLQ 401
++VENGGT + + V++ + LK + G D++H+ W+LDC K+ + L
Sbjct: 794 VIVENGGTKVQYPSKKTNYVVSSMKEVLKIQNLISSGSFDIVHFQWLLDCIEGKRRIPLG 853
Query: 402 PKYYLHLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNVDRSE-------------- 447
PKY + +++++ +E+D + D + D D+ +K ++R
Sbjct: 854 PKYMIFTTEATRDIFSKEIDPYGDSFTEDTDVQTLKDAFKQIERQSQQQNKQLNNNMIYQ 913
Query: 448 -------------DPKT--IDYYKKKYCPQDKWSCFHGCCIYFYHSTEPLSPDWEVLLGL 492
D K +Y + Y ++ WS F G Y + + ++
Sbjct: 914 AKQQQQLQLTLPTDKKNELFEYIESNYLIKEWWSLFRGLRFYL-DRYQVVGEKSTIMESN 972
Query: 493 ALRRLKLEISFHGGKVCNNLANATHVVVL 521
+K +I F+GG + +++ + VV+
Sbjct: 973 TFELVKNQIIFYGGIITSDIDDNVQYVVI 1001
>gi|118372223|ref|XP_001019308.1| DNA ligase IV [Tetrahymena thermophila]
gi|89301075|gb|EAR99063.1| DNA ligase IV [Tetrahymena thermophila SB210]
Length = 1026
Score = 176 bits (446), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 146/574 (25%), Positives = 256/574 (44%), Gaps = 90/574 (15%)
Query: 26 TVAM---NDGICVCVHVYMLSQLRSQIMAADQTGEPCW--------SLVAHNVDEVEKFF 74
TVAM +D +C+C ++ + L+++ E +L+ + D VE F
Sbjct: 425 TVAMEREDDELCICYKIFDILYLKTKDNKEYALTEYTLQYRKKILENLIDNQQDRVEVIF 484
Query: 75 --------------KETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDV 119
E I DEGIV+K L + + P DRS KW+K+K +Y D LD+
Sbjct: 485 GREYSDINDILTEFNEAIHRNDEGIVIKQLDTLYYPDDRSDKWIKMKGDYYEGIIDTLDL 544
Query: 120 LIIGGYYGS--------GRRGGEVAQFLVALAER-PAPDTYPRRFISFCRVGTGLSDEEL 170
++IGGY+G G + +LVA+A++ + + F +VG G + +
Sbjct: 545 IVIGGYFGEKSYKINGIGDWTDHITHYLVAVAKKIDLQNPSNSILVPFAKVGAGFTARDY 604
Query: 171 DAVVTKLKPYFRKYEYPKRAPPSFYQVTN-NSKERPDVWIESPEKSIILSITSDIRTIRS 229
+ +++ + + + + P Q K++PD +I SP+ S+IL I + I+S
Sbjct: 605 ADIKARMRDQWVRTNHSNKTPSFIIQNWKPGEKDKPDAYILSPQNSLILEIRA-TEIIQS 663
Query: 230 EVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPK-- 287
+ Y+LRFPR ++ R DK W DC+ +E+ + QK + D+ +
Sbjct: 664 SQYPTNYTLRFPRFEKFRRDKDWFDCMKFNEIIEMTQNLKKKEQKESDKEDNASDEEQDE 723
Query: 288 ---------------QFRSSRKGEKKN--VSIVPSHFLQTDVSDIKGETSIFSDMVFYFV 330
+ +R+G K N + V + +L DVSD+K E++IF++ VF +
Sbjct: 724 NGGKLKKKRKGQNGEEIEVNRQGRKPNWKTNKVMAQYLDIDVSDVKVESNIFNNFVFNII 783
Query: 331 NVPPAYSLD---------SLHKMVVENGGTFSMNLNNSVTHCVAAD-NKGLKYEAAKRRG 380
N+P SL + K +V NGG N +N VTH +A+ + ++ +
Sbjct: 784 NLPHEVSLSEEKILLEKAQIEKGIVANGGKKVQNDSNLVTHYIASHYDFKVQVIGDHYKV 843
Query: 381 DVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLL 440
+V+ WV DC +K LL P+Y ++ D ++ + D++ D Y+ D+D ++ +L
Sbjct: 844 NVLSLQWVKDCIKKKTLLDYSPRYIIYGQDQLLERNKLLYDQYGDSYYKDVDEDELLDIL 903
Query: 441 SNVDRSE-------------DPKTIDYYKKKYCPQDKWSCF-HGCCIYFYHSTEPLSPDW 486
++ + K I K + + CF G FY++ + L+ D
Sbjct: 904 KSMKIDQIEEEFQENEEFEEAVKDIISMKNQLFKE----CFPQGQTYCFYNANDKLNSD- 958
Query: 487 EVLLGLALRRLKLEISFHGGKVCNNLANATHVVV 520
+ LR L I F G +V +L + +V
Sbjct: 959 -----IDLRYLVDLIQFSGNQVVFDLQDEIDYIV 987
>gi|121799815|sp|Q2U6A1.1|DNLI4_ASPOR RecName: Full=DNA ligase 4; AltName: Full=DNA ligase IV; AltName:
Full=Polydeoxyribonucleotide synthase [ATP] 4
gi|83772786|dbj|BAE62914.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 1006
Score = 175 bits (443), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 144/536 (26%), Positives = 257/536 (47%), Gaps = 63/536 (11%)
Query: 69 EVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIGGYYG 127
E+E+ + +E EG+VLK+ S + +R W+K+KPEY+ G LDV++IGGYYG
Sbjct: 473 EIEEALRRVVEEASEGLVLKNPRSPYRLNERHDDWMKVKPEYMTEFGESLDVVVIGGYYG 532
Query: 128 SGRRGGEVAQFLVALAERPAPDT---YPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKY 184
SG RGG ++ FL L A + + SFC+VG G + D + + +
Sbjct: 533 SGHRGGGLSSFLCGLRVDDAHSSQGMVASKCYSFCKVGGGFT--AADYANIRHHTDGKWH 590
Query: 185 EYPKRAPPSFY---QVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFP 241
E+ R PP+ Y + ERPD+WI+ PE S++L + + + S+ F +LRFP
Sbjct: 591 EWKSRKPPTTYIELAGGDAQYERPDMWIK-PEDSVVLCVKAASVAV-SDQFRIGLTLRFP 648
Query: 242 RIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVS 301
R ++R DK W L VQ F++L +N ++ ++ + + + K+ +++ KK ++
Sbjct: 649 RFKKLRMDKDWKSALSVQEFLDL--KANAERERKEKEFNVDNSRKKR---AKRDNKKPLA 703
Query: 302 IVPSHFLQTDVSDIKGETSIFSDMVFYFV---NVPPAYSLDSLHKMVVENGGTFSMNLNN 358
IV + + + +IF + FY N P S L ++V NGG F N
Sbjct: 704 IV-GYSAEAEAQYTGPSGNIFEGLNFYITTDSNTPVKKSKAELEQLVKANGGKFFQTSNA 762
Query: 359 SVTHCVAADNKGLKYEAAKRRGDV--IHYSWVLDCCSQKK--------LLQLQPKYYLHL 408
+ + AD + +K + ++ G+V I SW+LDC Q + LL L+P++
Sbjct: 763 APSTICIADRRTVKAASLQKSGNVNIIRPSWILDCIRQSEIDAGLPDSLLPLEPRHVFFA 822
Query: 409 SDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNVDR------SEDPKTIDYYKKKYCPQ 462
+ K+++ VD F+D Y + ++K++L + + S++PK + ++ Q
Sbjct: 823 TQDKKEEIAASVDRFNDSYARNTTNDELKEILKQMSKDHHFHASQNPKIVRKLNERI--Q 880
Query: 463 DK----WS-----CFHGCCIYFYHS--------TEPLSPDWEVLLGLALRRLKLEISFHG 505
+K W F G I F + E + L LA + + F G
Sbjct: 881 EKVNAGWEMPSGWLFKGLTILFPQNDKVDDAEVDETSQTHQQYRLNLA----RNTVRFAG 936
Query: 506 GKVCNNLANATHVVVLSVLGYDVNFNSLTESFTAREKHLLWNKKLHVVRSQWLEDC 561
V ++ +++ +V++ + +S+ +S +A+ K H+V ++W+E+C
Sbjct: 937 ANVVDSKSSSVTHIVVAPGSSSSDVSSIRKSHSAKPG----KKVPHLVTAEWIEEC 988
>gi|238499783|ref|XP_002381126.1| DNA ligase, putative [Aspergillus flavus NRRL3357]
gi|220692879|gb|EED49225.1| DNA ligase, putative [Aspergillus flavus NRRL3357]
Length = 980
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 143/536 (26%), Positives = 256/536 (47%), Gaps = 63/536 (11%)
Query: 69 EVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYG 127
E+E+ + +E EG+VLK+ S + +R W+K+KPEY+ G LDV++IGGYYG
Sbjct: 447 EIEEALRRVVEEASEGLVLKNPRSPYRLNERHDDWMKVKPEYMTEFGESLDVVVIGGYYG 506
Query: 128 SGRRGGEVAQFLVALAERPAPDT---YPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKY 184
SG RGG ++ FL L A + + SFC+VG G + D + + +
Sbjct: 507 SGHRGGGLSSFLCGLRVDDAHSSQGMVASKCYSFCKVGGGFT--AADYANIRHHTDGKWH 564
Query: 185 EYPKRAPPSFY---QVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFP 241
E+ R PP+ Y + ERPD+WI+ PE S++L + + + S+ F +LRFP
Sbjct: 565 EWKSRKPPTTYIELAGGDAQYERPDMWIK-PEDSVVLCVKAASVAV-SDQFRIGLTLRFP 622
Query: 242 RIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVS 301
R ++R DK W L VQ F++L +N ++ ++ + + + K+ +++ KK ++
Sbjct: 623 RFKKLRMDKDWKSALSVQEFLDL--KANAERERKEKEFNVDNSRKKR---AKRDNKKPLA 677
Query: 302 IVPSHFLQTDVSDIKGETSIFSDMVFYFV---NVPPAYSLDSLHKMVVENGGTFSMNLNN 358
I + + + +IF + FY N P S L ++V NGG F N
Sbjct: 678 IA-GYSAEAEAQYTGPSGNIFEGLNFYITTDSNTPVKKSKAELEQLVKANGGKFFQTSNA 736
Query: 359 SVTHCVAADNKGLKYEAAKRRGDV--IHYSWVLDCCSQKK--------LLQLQPKYYLHL 408
+ + AD + +K + ++ G+V I SW+LDC Q + LL L+P++
Sbjct: 737 APSTICIADRRTVKAASLQKSGNVNIIRPSWILDCIRQSEIDAGLPDSLLPLEPRHVFFA 796
Query: 409 SDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNVDR------SEDPKTIDYYKKKYCPQ 462
+ K+++ VD F+D Y + ++K++L + + S++PK + ++ Q
Sbjct: 797 TQDKKEEIAASVDRFNDSYARNTTNDELKEILKQMSKDHHFHASQNPKIVRKLNERI--Q 854
Query: 463 DK----WS-----CFHGCCIYFYHS--------TEPLSPDWEVLLGLALRRLKLEISFHG 505
+K W F G I F + E + L LA + + F G
Sbjct: 855 EKVNAGWEMPSGWLFKGLTILFPQNDKVDDAEVDETSQTHQQYRLNLA----RNTVRFAG 910
Query: 506 GKVCNNLANATHVVVLSVLGYDVNFNSLTESFTAREKHLLWNKKLHVVRSQWLEDC 561
V ++ +++ +V++ + +S+ +S +A+ K H+V ++W+E+C
Sbjct: 911 ANVVDSKSSSVTHIVVAPGSSSSDVSSIRKSHSAKPG----KKVPHLVTAEWIEEC 962
>gi|317150466|ref|XP_001824047.2| hypothetical protein AOR_1_564094 [Aspergillus oryzae RIB40]
Length = 1822
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 144/536 (26%), Positives = 257/536 (47%), Gaps = 63/536 (11%)
Query: 69 EVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIGGYYG 127
E+E+ + +E EG+VLK+ S + +R W+K+KPEY+ G LDV++IGGYYG
Sbjct: 473 EIEEALRRVVEEASEGLVLKNPRSPYRLNERHDDWMKVKPEYMTEFGESLDVVVIGGYYG 532
Query: 128 SGRRGGEVAQFLVALAERPAPDT---YPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKY 184
SG RGG ++ FL L A + + SFC+VG G + D + + +
Sbjct: 533 SGHRGGGLSSFLCGLRVDDAHSSQGMVASKCYSFCKVGGGFT--AADYANIRHHTDGKWH 590
Query: 185 EYPKRAPPSFY---QVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFP 241
E+ R PP+ Y + ERPD+WI+ PE S++L + + + S+ F +LRFP
Sbjct: 591 EWKSRKPPTTYIELAGGDAQYERPDMWIK-PEDSVVLCVKAASVAV-SDQFRIGLTLRFP 648
Query: 242 RIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVS 301
R ++R DK W L VQ F++L +N ++ ++ + + + K+ +++ KK ++
Sbjct: 649 RFKKLRMDKDWKSALSVQEFLDL--KANAERERKEKEFNVDNSRKKR---AKRDNKKPLA 703
Query: 302 IVPSHFLQTDVSDIKGETSIFSDMVFYFV---NVPPAYSLDSLHKMVVENGGTFSMNLNN 358
IV + + + +IF + FY N P S L ++V NGG F N
Sbjct: 704 IV-GYSAEAEAQYTGPSGNIFEGLNFYITTDSNTPVKKSKAELEQLVKANGGKFFQTSNA 762
Query: 359 SVTHCVAADNKGLKYEAAKRRGDV--IHYSWVLDCCSQKK--------LLQLQPKYYLHL 408
+ + AD + +K + ++ G+V I SW+LDC Q + LL L+P++
Sbjct: 763 APSTICIADRRTVKAASLQKSGNVNIIRPSWILDCIRQSEIDAGLPDSLLPLEPRHVFFA 822
Query: 409 SDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNVDR------SEDPKTIDYYKKKYCPQ 462
+ K+++ VD F+D Y + ++K++L + + S++PK + ++ Q
Sbjct: 823 TQDKKEEIAASVDRFNDSYARNTTNDELKEILKQMSKDHHFHASQNPKIVRKLNERI--Q 880
Query: 463 DK----WS-----CFHGCCIYFYHS--------TEPLSPDWEVLLGLALRRLKLEISFHG 505
+K W F G I F + E + L LA + + F G
Sbjct: 881 EKVNAGWEMPSGWLFKGLTILFPQNDKVDDAEVDETSQTHQQYRLNLA----RNTVRFAG 936
Query: 506 GKVCNNLANATHVVVLSVLGYDVNFNSLTESFTAREKHLLWNKKLHVVRSQWLEDC 561
V ++ +++ +V++ + +S+ +S +A+ K H+V ++W+E+C
Sbjct: 937 ANVVDSKSSSVTHIVVAPGSSSSDVSSIRKSHSAKPG----KKVPHLVTAEWIEEC 988
>gi|403348596|gb|EJY73737.1| DNA ligase [Oxytricha trifallax]
Length = 1144
Score = 174 bits (440), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 127/440 (28%), Positives = 216/440 (49%), Gaps = 63/440 (14%)
Query: 54 QTGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA 113
+ G+ C VD+V F ++I +EGI++K + S ++P +RS W+KLK EYI +
Sbjct: 451 EMGKEC-----ETVDQVFDEFNQSIYKNEEGIIIKKIESVYKPNERSVNWIKLKGEYIDS 505
Query: 114 -GSDLDVLIIGGYYGSGRRGG------EVAQFLVALA---ERPAPD---TYPRRFISFCR 160
G LD+++IGGY+G +R G + FLV + ++ P YP F R
Sbjct: 506 LGDTLDLIVIGGYFGERKRIGGNDWTDHINVFLVGVMKKLDKQNPQNCVVYP-----FSR 560
Query: 161 VGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFY-QVTNNSKERPDVWIESPEKSIILS 219
VGTG S +EL + +LKPY++ Y+ R PP+ Y + + +RPDV+I KS+IL
Sbjct: 561 VGTGYSMDELSKLRNQLKPYWKMYD--ARMPPALYGRWVPSMSDRPDVYITDVSKSVILE 618
Query: 220 ITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCL---DVQSFVELVHSSNGTTQKGK 276
I + + S+ + Y+LRFPR+ ++RYDK W + D+Q ++ S +K
Sbjct: 619 IRAG-ELVVSDQYPTMYTLRFPRVLKIRYDKNWDEAFSHYDLQDMIKNFQESRRLKKKDN 677
Query: 277 EYGGLQDD--------------------------KPKQFRSSRKGE-----KKNVSIVPS 305
G + + K + ++S G+ K S V
Sbjct: 678 AKGIYEHNDEDEDEQQDGKKKRKNKKRAISEEELKSRDGQASEDGQIYITHKDKFSKVID 737
Query: 306 HFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDS-LHKMVVENGGTFSMNLNNSVTHCV 364
+ + D ++ ++ +F M FY VNV + + L +VE+GGT NL + TH V
Sbjct: 738 FYREADTKNVVRKSDMFRGMEFYIVNVDDSIANKPYLESRIVEHGGTRVQNLRPTTTHIV 797
Query: 365 AAD-NKGLKYEAAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEVDEF 423
AA + +K K +++ ++WVL C + L+ L+P Y LH ++ + ++ +D +
Sbjct: 798 AAHIDFKVKILIEKLNMNIVKFNWVLACIERGFLVDLEPVYMLHANEKLLEYFRDNLDPY 857
Query: 424 SDLYFWDLDLADIKQLLSNV 443
+D Y +D + ++L +
Sbjct: 858 NDHYTQFVDPKRLTEILDQI 877
>gi|327297292|ref|XP_003233340.1| DNA ligase 4 [Trichophyton rubrum CBS 118892]
gi|326464646|gb|EGD90099.1| DNA ligase 4 [Trichophyton rubrum CBS 118892]
Length = 995
Score = 173 bits (439), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 146/557 (26%), Positives = 266/557 (47%), Gaps = 65/557 (11%)
Query: 63 VAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLI 121
V + ++E ++ + EG+VLK+ S + +R+ W+K+KP+Y+ G LD ++
Sbjct: 456 VGKSASDIEPLLRKVVAEASEGLVLKNPNSPYRLNERNDDWMKVKPDYMTEFGESLDCIV 515
Query: 122 IGGYYGSGRRGGEVAQFLVALAERPAPDTY------PRRFISFCRVGTGLSDEELDAVVT 175
+GGYYGSG+RGG ++ +L L DT+ P + SFC+VG G + + +
Sbjct: 516 VGGYYGSGKRGGNISSYLCGLR---VDDTHAEDGANPMKCYSFCKVGGGFTAADYANIRH 572
Query: 176 KLKPYFRKYEYPKRAPPSFYQVTNN--SKERPDVWIESPEKSIILSITSDIRTIRSEVFS 233
+ + PK+ P + ++ ERPDVWI+ P+ S+++ + + T S+ F
Sbjct: 573 HTHGKWHDWN-PKKPPTEYIELAGGDAQHERPDVWIK-PDDSVVVCVKAAAVT-PSDQFR 629
Query: 234 APYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSR 293
++RFPR R+R DK W L VQ F++L G Q+ KE Q D ++ + ++
Sbjct: 630 LGLTVRFPRFKRLRMDKDWQSALSVQEFMDL---KAGAEQEKKE-KDFQVDNSRR-KQTK 684
Query: 294 KGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFVN---VPPAYSLDSLHKMVVENGG 350
+ +KK +++ S + +V+ + +T IF + F+ + P S L +++ NGG
Sbjct: 685 RSKKKELTVAGSG--EANVAYVGRKTHIFDGLSFFVMTESVKPMKKSKADLEQLIKANGG 742
Query: 351 -TFSMNLNNSVTHCVAADNKGLKYEAAKRRG--DVIHYSWVLDCCSQKK--------LLQ 399
+ N T+C+ AD + +K + ++ G +VI W+ DC +Q + LL
Sbjct: 743 KIYQTNTAVKDTYCI-ADRRTVKVASLQKSGLENVIRPCWIFDCINQNEHDTGKDGVLLP 801
Query: 400 LQPKYYLHLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNVDRSED---PKTIDYYK 456
L+P+ + K+++ VD++ D + D ++A++ ++L +D + + +D
Sbjct: 802 LEPRPMFFTKEDQKEEISNNVDKYDDSFARDTNIAELTEILHKMDVTSAISREERLDIMS 861
Query: 457 KKYCPQDKWSC--------FHGCCIYFYHSTE-PLSPDWEVLLGLALR-RLKLEIS-FHG 505
D+ S F I+F + P P + GL++R +L I+ F G
Sbjct: 862 DLTVDGDQGSVHSYVEGWLFKSLTIFFAPCSHLPSVPGKPCVDGLSMRQQLARNITIFTG 921
Query: 506 GKVCNNLAN--ATHVVVLSV------LGYDVNFNSLTESFTAREKHLLWNKKLHVVRSQW 557
V + N THV+V G N+++L F +R H V QW
Sbjct: 922 ATVTDQQKNNWITHVIVDPSEDRDPETGKPKNYSTLRSGFASRR------AIPHFVTVQW 975
Query: 558 LEDCLAKEQKSEEYEYS 574
+E+C ++ +E +S
Sbjct: 976 VEECWKEKTLVDEERFS 992
>gi|391874232|gb|EIT83153.1| ATP-dependent DNA ligase IV [Aspergillus oryzae 3.042]
Length = 1006
Score = 173 bits (439), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 143/536 (26%), Positives = 256/536 (47%), Gaps = 63/536 (11%)
Query: 69 EVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIGGYYG 127
E+E+ + +E EG+VLK+ S + +R W+K+KPEY+ G LDV++IGGYYG
Sbjct: 473 EIEEALRRVVEEASEGLVLKNPRSPYRLNERHDDWMKVKPEYMTEFGESLDVVVIGGYYG 532
Query: 128 SGRRGGEVAQFLVALAERPAPDT---YPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKY 184
SG RGG ++ FL L A + + SFC+VG G + D + + +
Sbjct: 533 SGHRGGGLSSFLCGLRVDDAHSSQGMVASKCYSFCKVGGGFT--AADYANIRHHTDGKWH 590
Query: 185 EYPKRAPPSFY---QVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFP 241
E+ R PP+ Y + ERPD+WI+ PE S++L + + + S+ F +LRFP
Sbjct: 591 EWKSRKPPTTYIELAGGDAQYERPDMWIK-PEDSVVLCVKAASVAV-SDQFRIGLTLRFP 648
Query: 242 RIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVS 301
R ++R DK W L VQ F++L +N ++ ++ + + + K+ +++ KK ++
Sbjct: 649 RFKKLRMDKDWKSALSVQEFLDL--KANAERERKEKEFNVDNSRKKR---AKRDNKKPLA 703
Query: 302 IVPSHFLQTDVSDIKGETSIFSDMVFYFV---NVPPAYSLDSLHKMVVENGGTFSMNLNN 358
I + + + +IF + FY N P S L ++V NGG F N
Sbjct: 704 IA-GYSAEAEAQYTGPSGNIFEGLNFYITTDSNTPVKKSKAELEQLVKANGGKFFQTSNA 762
Query: 359 SVTHCVAADNKGLKYEAAKRRGDV--IHYSWVLDCCSQKK--------LLQLQPKYYLHL 408
+ + AD + +K + ++ G+V I SW+LDC Q + LL L+P++
Sbjct: 763 APSTICIADRRTVKAASLQKSGNVNIIRPSWILDCIRQSEIDAGLPDSLLPLEPRHVFFA 822
Query: 409 SDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNVDR------SEDPKTIDYYKKKYCPQ 462
+ K+++ VD F+D Y + ++K++L + + S++PK + ++ Q
Sbjct: 823 TQDKKEEIAASVDRFNDSYARNTTNDELKEILKQMSKDHHFHASQNPKIVRKLNERI--Q 880
Query: 463 DK----WS-----CFHGCCIYFYHS--------TEPLSPDWEVLLGLALRRLKLEISFHG 505
+K W F G I F + E + L LA + + F G
Sbjct: 881 EKVNAGWEMPSGWLFKGLTILFPQNDKVDDAEVDETSQTHQQYRLNLA----RNTVRFAG 936
Query: 506 GKVCNNLANATHVVVLSVLGYDVNFNSLTESFTAREKHLLWNKKLHVVRSQWLEDC 561
V ++ +++ +V++ + +S+ +S +A+ K H+V ++W+E+C
Sbjct: 937 ANVVDSKSSSVTHIVVAPGSSSSDVSSIRKSHSAKPG----KKVPHLVTAEWIEEC 988
>gi|347800583|dbj|BAK86395.1| DNA ligase 4 [Trichophyton interdigitale]
Length = 999
Score = 173 bits (438), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 143/556 (25%), Positives = 254/556 (45%), Gaps = 63/556 (11%)
Query: 63 VAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLI 121
V + ++E ++ + EG+VLK+ S + +R+ W+K+KP+Y+ G LD ++
Sbjct: 460 VGKSASDIEPLLRKVVAEASEGLVLKNPNSPYRLNERNDDWMKVKPDYMTEFGESLDCIV 519
Query: 122 IGGYYGSGRRGGEVAQFLVALAERPAPDTY------PRRFISFCRVGTGLSDEELDAVVT 175
+GGYYGSG+RGG ++ +L L DT+ P + SFC+VG G + + +
Sbjct: 520 VGGYYGSGKRGGNISSYLCGLR---VDDTHAEDGANPMKCYSFCKVGGGFTAVDYANIRH 576
Query: 176 KLKPYFRKYEYPKRAPPSFYQVTNN--SKERPDVWIESPEKSIILSITSDIRTIRSEVFS 233
+ + PK+ P + ++ ERPDVWI+ P+ SI++ + + T S+ F
Sbjct: 577 HTDGKWHDWN-PKKPPTEYIELAGGDAQHERPDVWIK-PDDSIVVCVKAAAVT-PSDQFR 633
Query: 234 APYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSR 293
++RFPR R+R DK W L VQ F++L + G Q+ K K+F+
Sbjct: 634 LGLTVRFPRFKRLRMDKDWQSALSVQEFMDL------------KAGAEQEKKEKEFQVDN 681
Query: 294 KGEKKNVSIVPSHFL-----QTDVSDIKGETSIFSDMVFYFVN---VPPAYSLDSLHKMV 345
KK + +V+ I +T+IF + F+ + P S L +++
Sbjct: 682 SRRKKIKKSKKKELTVAGSGEANVAYIGRKTNIFDGLSFFVMTESVKPMKKSKADLEQLI 741
Query: 346 VENGG-TFSMNLNNSVTHCVAADNKGLKYEAAKRRG--DVIHYSWVLDCCSQKK------ 396
NGG + N T+C+ AD + +K + ++ G +VI W+ DC SQ +
Sbjct: 742 KANGGKIYQTNTAAKDTYCI-ADRRTVKVASLQKSGLENVIRPCWIFDCISQNEHDTGED 800
Query: 397 --LLQLQPKYYLHLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNVDRSEDPK---- 450
LL L+P++ + K+++ VD++ D + + +A++ ++L +D D
Sbjct: 801 GVLLPLEPRHMFFTKEDQKEEISNNVDQYDDSFARNTSIAELTEILHKMDVISDISGEER 860
Query: 451 -------TIDYYKKKYCPQDKWSCFHGCCIYFYHSTEPLSPDWEVLL-GLALR-RLKLEI 501
T+D + + F G ++F + S E+ + GL++R +L +
Sbjct: 861 LDIMSDLTVDGNQGSAHSYVEGWLFKGLTMFFAPCSHLSSIPGELCVDGLSMRQQLARNV 920
Query: 502 S-FHGGKVCNNLAN--ATHVVVLSVLGYDVNFNSLTESFTAREKHLLWNKKLHVVRSQWL 558
+ F G V + N THV+V D +T R H V QW+
Sbjct: 921 TIFTGATVTDQQKNDRITHVIVDPSEDRDPETGKPKSYYTLRSGFATRRAIPHFVTVQWV 980
Query: 559 EDCLAKEQKSEEYEYS 574
E+C ++ +E +S
Sbjct: 981 EECWKEKTLVDEERFS 996
>gi|367027680|ref|XP_003663124.1| hypothetical protein MYCTH_2304601 [Myceliophthora thermophila ATCC
42464]
gi|347010393|gb|AEO57879.1| hypothetical protein MYCTH_2304601 [Myceliophthora thermophila ATCC
42464]
Length = 1025
Score = 172 bits (437), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 142/550 (25%), Positives = 251/550 (45%), Gaps = 63/550 (11%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLII 122
A + DE+E + + EG+VLK+ S+++ R+ W+K+KPEY+ G LD++++
Sbjct: 498 ATSADEIEPLLRAVVAEASEGLVLKNPRSRYQLNSRNNDWIKVKPEYMSEYGESLDLVVV 557
Query: 123 GGYYGSGRRGGEVAQFLVALA-----ERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
GGY+GSGRRGG ++ FL L R + +SFC+VG G E+ +
Sbjct: 558 GGYWGSGRRGGTLSSFLCGLRVSENFVRSGAAASREKCLSFCKVGGGFKAEDYAEMRHHT 617
Query: 178 KPYFRKYEYPKRAPPSFYQVTNNSK---ERPDVWIESPEKSIILSITSDIRTIRSEVFSA 234
+ +R+++ P P F ++ + ERPDVWI P +S+++S+ + S+ F+
Sbjct: 618 EGKWREWD-PASPPSEFVELGGGERLQYERPDVWIR-PSESVVISVKA-ASFAPSDQFAT 674
Query: 235 PYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRK 294
++LRFPR ++R DK W +DV EL + Q+ KE ++ + K R K
Sbjct: 675 GWTLRFPRFRKLRLDKAWDAGMDVD---ELEALRSKVKQEEKERKAMEMENRK--RKPAK 729
Query: 295 GEKKNVSIVPSHFLQTDVSDI----KGETSIFSDMVFYFVN---VPPAYSLDSLHKMVVE 347
+K+ + I + L +D K +T +F + F ++ P S L K++ E
Sbjct: 730 RQKRELVIAGAADLAGATADFLAVKKPKTDLFRGLDFCVLSEAVKPKKMSKPDLEKLIKE 789
Query: 348 NGGTFSMNLNNSVTHCVAADNKGLKYEAAKRRG--DVIHYSWVLDCCSQKK----LLQLQ 401
NGG + + AD ++ + K+ G D++ WV DC Q LL +
Sbjct: 790 NGGRIHQTVEKGSGMIILADKNVVRVASLKKAGDADIVRPKWVFDCLEQSGGEGYLLPFE 849
Query: 402 PKYYLHLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNVDRSEDPKTIDYYKKKYCP 461
+ L ++ +K +E D++ D Y D+ + +++ +L ++ E+ D
Sbjct: 850 EGHLLSATEEMRKLAEESTDQYGDSYARDVGVDELRDILEQMELPEEGSHFDVDNFLDQL 909
Query: 462 QDKWSCFHGCCIYFYHSTEPLSPDWEVLLGLAL---RRLKLE--ISFHGGKVCNNLAN-- 514
++ G + + LG + R LKL + F G+V +++ +
Sbjct: 910 EEHGRGLDGLESFMFRRCRV-----HFALGEGVPESRALKLMNYVRFGNGEVVSDIEDKR 964
Query: 515 ATHVVVLS----------VLGYDVNFNSLTESFTAREKHLLWNKKLHVVRSQWLEDCLAK 564
THVVV+ V+ DV + + R VV ++W+EDC +
Sbjct: 965 ITHVVVVGGKGETSASERVVAADVRYKVSSRRAVPR-----------VVSARWVEDCWRE 1013
Query: 565 EQKSEEYEYS 574
+E EY+
Sbjct: 1014 GTLVDEEEYA 1023
>gi|427784439|gb|JAA57671.1| Putative dna ligase [Rhipicephalus pulchellus]
Length = 890
Score = 172 bits (436), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 128/449 (28%), Positives = 208/449 (46%), Gaps = 35/449 (7%)
Query: 72 KFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIGGYYGSGR 130
+ IE ++EGIVLK L S ++P R WLKLKPEY+ SDLD+LI+GGY+G GR
Sbjct: 420 RLLNRAIEEQEEGIVLKRLSSVYKPNARKAGWLKLKPEYVDNLVSDLDMLILGGYFGEGR 479
Query: 131 RGGEVAQFLVALAERPA-PDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKR 189
R G V+ FL+ +A D P F S +VG+G S +ELD ++ KL ++ Y+ PK+
Sbjct: 480 RSGVVSHFLLGVASGDQDDDGTPHTFWSVAKVGSGYSLQELDDLLAKLTSKWKVYD-PKK 538
Query: 190 APPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYD 249
PP + KE+PD+++E P S++L I + +RS F +LRFPR+ +R+D
Sbjct: 539 -PPEKLVLAPGHKEKPDLYLE-PSDSVVLQIKAS-ELVRSSQFRTGITLRFPRVAAIRHD 595
Query: 250 KPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQ 309
KPW D L EL ++ G G ++D + R G S+ +HF
Sbjct: 596 KPWQDVLSYSELCELEKAAGGKLATAT-LGHDENDGGSPAKKRRVGASVKASL-GTHFQP 653
Query: 310 TDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMNLNNSVTHCVAADNK 369
++S + +I + + L V E GG+ N + T C+ A+
Sbjct: 654 ANLSGAAKKCTILKGKEICILTGCADLTKQELEVKVAELGGSLVQNPSKE-TFCIVAEKL 712
Query: 370 GLKYEA--AKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEVDEFSDLY 427
+ + R+ DV+ + +L +P S ++ +L++ DE+ D Y
Sbjct: 713 NFRARSYVKSRKWDVVKADKFVALLDSTELRPWEPADLWCASTKTENRLKDLFDEYGDSY 772
Query: 428 FWDLDLADIKQLLSNVDRSEDPKTID--------YYKKKYCPQDKWSCFHGCCIYFYHST 479
+ + + ++ + + + E K +D + ++ + + +W F C +
Sbjct: 773 TVPVTPSSLCEIFAAIPK-EACKQVDDLEAFIFEFEQENFASRPQWGLFRNCTFRLSEES 831
Query: 480 EPLSPDWEVLLGLALRRLKLEISFHGGKV 508
E L RL I HGGKV
Sbjct: 832 E-------------LNRLI--IRLHGGKV 845
>gi|326481603|gb|EGE05613.1| DNA ligase [Trichophyton equinum CBS 127.97]
Length = 999
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 141/556 (25%), Positives = 254/556 (45%), Gaps = 63/556 (11%)
Query: 63 VAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLI 121
V + ++E ++ + EG+VLK+ S + +R+ W+K+KP+Y+ G LD ++
Sbjct: 460 VGKSASDIEPLLRKVVAEASEGLVLKNPNSPYRLNERNDDWMKVKPDYMTEFGESLDCIV 519
Query: 122 IGGYYGSGRRGGEVAQFLVALAERPAPDTY------PRRFISFCRVGTGLSDEELDAVVT 175
+GGYYGSG+RGG ++ +L L DT+ P + SFC+VG G + + +
Sbjct: 520 VGGYYGSGKRGGNISSYLCGLR---VDDTHAEDGANPMKCYSFCKVGGGFTAADYANIRH 576
Query: 176 KLKPYFRKYEYPKRAPPSFYQVTNN--SKERPDVWIESPEKSIILSITSDIRTIRSEVFS 233
+ + P++ P + ++ ERPDVWI+ P+ SI++ + + T S+ F
Sbjct: 577 HTDGKWHDWN-PQKPPTEYIELAGGDAQHERPDVWIK-PDDSIVVCVKAAAVT-PSDQFR 633
Query: 234 APYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSR 293
++RFPR R+R DK W L VQ F++L + G Q+ K K+F+
Sbjct: 634 LGLTVRFPRFKRLRMDKDWQSALSVQEFMDL------------KAGAEQEKKEKEFQVDN 681
Query: 294 KGEKKNVSIVPSHFL-----QTDVSDIKGETSIFSDMVFYFVN---VPPAYSLDSLHKMV 345
+KK + +V+ + +T+IF + F+ + P S L +++
Sbjct: 682 SRKKKIKRSKKKELTVAGSGEANVAYVGRKTNIFDGLSFFVMTESVKPMKKSKVDLEQLI 741
Query: 346 VENGG-TFSMNLNNSVTHCVAADNKGLKYEAAKRRG--DVIHYSWVLDCCSQKK------ 396
NGG + N T+C+ AD + +K + ++ G +VI W+ DC SQ +
Sbjct: 742 KANGGKIYQTNTAAKFTYCI-ADRRTVKVASLQKSGLENVIRPCWIFDCISQNEHDTGED 800
Query: 397 --LLQLQPKYYLHLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNVDRSEDPK---- 450
LL L+P++ + K+++ VD++ D + + +A++ ++L +D D
Sbjct: 801 GVLLPLEPRHMFFTKEDQKEEISNNVDQYDDSFARNTSIAELTEILHKMDVISDISGEER 860
Query: 451 -------TIDYYKKKYCPQDKWSCFHGCCIYFYHSTEPLS-PDWEVLLGLALR-RLKLEI 501
T+D + + F G ++F + S P + GL++R +L +
Sbjct: 861 LDIMSDLTVDGNQGSAHSYVEGWLFKGLTMFFAPCSHLSSIPGEPCVDGLSIRQQLARNV 920
Query: 502 S-FHGGKVCNNLAN--ATHVVVLSVLGYDVNFNSLTESFTAREKHLLWNKKLHVVRSQWL 558
+ F G V + N THV+V D +T R H V QW+
Sbjct: 921 TIFTGATVTDQQKNDRITHVIVDPSEDRDPETGKPKSYYTLRSGFATRRAIPHFVTVQWV 980
Query: 559 EDCLAKEQKSEEYEYS 574
E+C ++ +E +S
Sbjct: 981 EECWKEKTLVDEERFS 996
>gi|326472379|gb|EGD96388.1| DNA ligase 4 [Trichophyton tonsurans CBS 112818]
Length = 995
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 141/556 (25%), Positives = 254/556 (45%), Gaps = 63/556 (11%)
Query: 63 VAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLI 121
V + ++E ++ + EG+VLK+ S + +R+ W+K+KP+Y+ G LD ++
Sbjct: 456 VGKSASDIEPLLRKVVAEASEGLVLKNPNSPYRLNERNDDWMKVKPDYMTEFGESLDCIV 515
Query: 122 IGGYYGSGRRGGEVAQFLVALAERPAPDTY------PRRFISFCRVGTGLSDEELDAVVT 175
+GGYYGSG+RGG ++ +L L DT+ P + SFC+VG G + + +
Sbjct: 516 VGGYYGSGKRGGNISSYLCGLR---VDDTHAEDGANPMKCYSFCKVGGGFTAADYANIRH 572
Query: 176 KLKPYFRKYEYPKRAPPSFYQVTNN--SKERPDVWIESPEKSIILSITSDIRTIRSEVFS 233
+ + P++ P + ++ ERPDVWI+ P+ SI++ + + T S+ F
Sbjct: 573 HTDGKWHDWN-PQKPPTEYIELAGGDAQHERPDVWIK-PDDSIVVCVKAAAVT-PSDQFR 629
Query: 234 APYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSR 293
++RFPR R+R DK W L VQ F++L + G Q+ K K+F+
Sbjct: 630 LGLTVRFPRFKRLRMDKDWQSALSVQEFMDL------------KAGAEQEKKEKEFQVDN 677
Query: 294 KGEKKNVSIVPSHFL-----QTDVSDIKGETSIFSDMVFYFVN---VPPAYSLDSLHKMV 345
+KK + +V+ + +T+IF + F+ + P S L +++
Sbjct: 678 SRKKKIKRSKKKELTVAGSGEANVAYVGRKTNIFDGLSFFVMTESVKPMKKSKVDLEQLI 737
Query: 346 VENGG-TFSMNLNNSVTHCVAADNKGLKYEAAKRRG--DVIHYSWVLDCCSQKK------ 396
NGG + N T+C+ AD + +K + ++ G +VI W+ DC SQ +
Sbjct: 738 KANGGKIYQTNTAAKDTYCI-ADRRTVKVASLQKSGLENVIRPCWIFDCISQNEHDTGED 796
Query: 397 --LLQLQPKYYLHLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNVDRSEDPK---- 450
LL L+P++ + K+++ VD++ D + + +A++ ++L +D D
Sbjct: 797 GVLLPLEPRHMFFTKEDQKEEISNNVDQYDDSFARNTSIAELTEILHKMDVISDISGEER 856
Query: 451 -------TIDYYKKKYCPQDKWSCFHGCCIYFYHSTEPLS-PDWEVLLGLALR-RLKLEI 501
T+D + + F G ++F + S P + GL++R +L +
Sbjct: 857 LDIMSDLTVDGNQGSAHSYVEGWLFKGLTMFFAPCSHLSSIPGEPCVDGLSIRQQLARNV 916
Query: 502 S-FHGGKVCNNLAN--ATHVVVLSVLGYDVNFNSLTESFTAREKHLLWNKKLHVVRSQWL 558
+ F G V + N THV+V D +T R H V QW+
Sbjct: 917 TIFTGATVTDQQKNDRITHVIVDPSEDRDPETGKPKSYYTLRSGFATRRAIPHFVTVQWV 976
Query: 559 EDCLAKEQKSEEYEYS 574
E+C ++ +E +S
Sbjct: 977 EECWKEKTLVDEERFS 992
>gi|212529366|ref|XP_002144840.1| DNA ligase, putative [Talaromyces marneffei ATCC 18224]
gi|210074238|gb|EEA28325.1| DNA ligase, putative [Talaromyces marneffei ATCC 18224]
Length = 1005
Score = 169 bits (429), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 146/543 (26%), Positives = 257/543 (47%), Gaps = 69/543 (12%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLII 122
A E+E ++ +E EG+VLK+ S + +R W+K+KPEY+ G LD++II
Sbjct: 463 ATTAAEIEPILRKVVEEASEGLVLKNPRSPYRLNERHDDWMKVKPEYMTEFGEALDLVII 522
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVV----TKLK 178
GGYYGSG+RGG ++ +L L ++ + SFC+VG G + + + K K
Sbjct: 523 GGYYGSGKRGGVLSSYLCGLRVDDRNESNSMKCYSFCKVGGGFTASDYANIRHHTDGKWK 582
Query: 179 PYFRKYEYPKRAPPSFYQVTNN---SKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP 235
P+ PK+ P F ++ KERPD WI P++S+++ + + ++ SE F
Sbjct: 583 PW-----NPKKPPTEFIELAGGEVAQKERPDEWIR-PDESVVVCVKAASVSV-SEEFRMG 635
Query: 236 YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKG 295
+LRFPR ++R DK W L VQ F++L S+ QK KE+ + + + K+ ++S
Sbjct: 636 LTLRFPRFKKLRMDKDWKSALSVQEFLDL-KSNVEKEQKEKEF-TVDNSRRKRIKAS--- 690
Query: 296 EKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFV---NVPPAYSLDSLHKMVVENGG-T 351
KK ++I + + + ++F +M F+ + N P S L ++V NGG
Sbjct: 691 TKKPLTIA-GYDEEAKMEYAGPSGNVFDNMNFFVMTDANGPKKKSKAELEQLVKSNGGKI 749
Query: 352 FSMNLNNSVTHCVAADNKGLKYEAAKR--RGDVIHYSWVLDCCSQKK--------LLQLQ 401
+ N T C+ AD + +K + ++ R D+I +W+ DC Q + LL L+
Sbjct: 750 YQTNTAAPKTVCI-ADRRTVKVASLQKSAREDIIRPNWLFDCIKQNEIDRHLSCYLLPLE 808
Query: 402 PKYYLHLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNVDRS-----EDPKTIDYYK 456
P++ ++ + ++ + VD ++D Y D+ +++ +L S E ID
Sbjct: 809 PRHMFFTTEDRRGEIDDNVDVYNDSYARDVTPEELRTILDAAKPSRQQLIEYDAEIDKIS 868
Query: 457 KKYCPQDK--------WSCFHGCCIYFYHSTEPLSPDWEVLLGLALRRLKLEISFHGGKV 508
+ Q W F G ++F+ S + ++ L LA + + F G ++
Sbjct: 869 ETVFEQAHEGGTTPPGW-LFRGLAMHFHESADSSDTSDQIRLFLAQKVAE----FGGAEI 923
Query: 509 CNNL--------ANATHVVVL----SVLGYDVNFNSLTESFTAREKHLLWNKKLHVVRSQ 556
+++ +ATH+VV+ S+ G N ++ L K H+V
Sbjct: 924 VDDMGITSGKQKGHATHIVVVATDDSIKGEIANIRKTLAQQQMSDRGL---KVPHIVTMG 980
Query: 557 WLE 559
W+E
Sbjct: 981 WIE 983
>gi|301117706|ref|XP_002906581.1| DNA ligase, putative [Phytophthora infestans T30-4]
gi|262107930|gb|EEY65982.1| DNA ligase, putative [Phytophthora infestans T30-4]
Length = 971
Score = 167 bits (422), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 124/495 (25%), Positives = 234/495 (47%), Gaps = 57/495 (11%)
Query: 76 ETIENRDEGIVLKDLGSKWEPGD---RSGKWLKLKPEYIRAGSDLDVLIIGGYYGSG-RR 131
+ + N EG+++KDL + + G+ ++ KWLKLKP+Y +DLDV+I+GG+YG+G RR
Sbjct: 432 QQVSNGGEGVIMKDLNAHYMCGESSRKAKKWLKLKPDYAGMTTDLDVIIVGGFYGTGRRR 491
Query: 132 GGEVAQFLVAL----------AERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYF 181
G V+ FL+ + AE P +F +VGTG + EEL+ + +L+PY+
Sbjct: 492 SGNVSVFLLGVLAHSLDEKKAAEATKPGAACPVVYTFAKVGTGYNLEELEQMRQELEPYW 551
Query: 182 RKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFP 241
+ ++ S RPDVWI+ P S IL + + ++ ++RFP
Sbjct: 552 QPWDDDNVPSHLNGWKPQKSDLRPDVWID-PRHSKILEVYG-FELSFTTLYQTGLTIRFP 609
Query: 242 RIDRVRYDKPWHDCLDVQSFVELVHSSNG--TTQKGKEYGGLQDDKPKQFRSSRKGEKKN 299
R +R DK W+ C+D+Q ++++ G +T++ E Q K+ + + +
Sbjct: 610 RCKAIRNDKEWYQCIDLQD----LNAARGSLSTKRASEVALGQKSATKRIKKRQTVSARR 665
Query: 300 VSIVPSHFLQTDVSDIKGETSIFSDMVFYFV----NVPP-----------------AYSL 338
+ V + + D+ I+ E ++F M F + PP S
Sbjct: 666 PNGVLQDYSRADLEGIEQERNVFEGMEFCVLPGKYQKPPQDLASSFPDGIFEKNAMQLSK 725
Query: 339 DSLHKMVVENGGTFSMN-LNNSVTHCVAADNKGLKYEAAKRRG--DVIHYSWVLDCCSQK 395
++ K++ GG N + S + VAA + G K K++G +V+H WV +C
Sbjct: 726 QTVEKLLHSFGGAIVQNPIAGSTHYVVAAGDSGFKVVNLKKQGLFNVVHIRWVFNCIVAS 785
Query: 396 KLLQLQPKYYLHLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNVDRSEDPKTIDY- 454
+L+ L+ ++ +D ++ L +E D + D + + D++++L + + + K
Sbjct: 786 RLVSLKAGDFISATDLQRQLLAKEYDRYGDHFTEHVTPDDLRRILQELSSASERKHTSLP 845
Query: 455 ---------YKKKYCPQDKWSCFHGCCIYFYHSTEPLSPDWEVLLGLALRRLKLEISFHG 505
++ ++ C +YF++S+ D +VL ++ ++ ++ +G
Sbjct: 846 WQFKLKELEMEEAEAMDSAFTFLAHCVVYFHNSSSSEDKDIDVLAMGQMKLIEQQLKLYG 905
Query: 506 GKVCNNL-ANATHVV 519
G V + ++ATHVV
Sbjct: 906 GVVAREIDSSATHVV 920
>gi|302662106|ref|XP_003022712.1| hypothetical protein TRV_03173 [Trichophyton verrucosum HKI 0517]
gi|291186672|gb|EFE42094.1| hypothetical protein TRV_03173 [Trichophyton verrucosum HKI 0517]
Length = 1012
Score = 167 bits (422), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 150/562 (26%), Positives = 267/562 (47%), Gaps = 63/562 (11%)
Query: 63 VAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLI 121
V + ++E ++ + EG+VLK+ S + +R+ W+K+KP+Y+ G LD ++
Sbjct: 456 VGKSASDIEPLLRKVVAEASEGLVLKNPNSPYRLNERNDDWMKVKPDYMTEFGESLDCIV 515
Query: 122 IGGYYGSGRRGGEVAQFLVALA--ERPAPD-TYPRRFISFCRVGTGLSDEELDAVVTKLK 178
+GGYYGSG+RGG ++ +L L + A D T P + SFC+VG G + + +
Sbjct: 516 VGGYYGSGKRGGNISSYLCGLRVDDTHAEDGTNPMKCYSFCKVGGGFTAADYANIRHHTD 575
Query: 179 PYFRKYEYPKRAPPSFYQVTNN--SKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPY 236
+ + PK+ P + ++ ERPDVWI+ P+ S+++ + + T S+ F
Sbjct: 576 GKWHDWN-PKKPPTEYIELAGGDAQHERPDVWIK-PDDSVVVCVKAAAVT-PSDQFRLGL 632
Query: 237 SLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGE 296
++RFPR R+R DK W L VQ F++L G Q+ KE D+ ++ +++ +
Sbjct: 633 TVRFPRFKRLRMDKDWQSALSVQEFIDL---KAGAEQEKKEKDFQVDNSRRK--KTKRSK 687
Query: 297 KKNVSIVPSHFLQTDVSDIKGETSIFSDMVF----------YFVNVPPAYSLDS------ 340
KK +++V S + +V+ + +T IF + F + ++P +S
Sbjct: 688 KKELTVVGSG--EPNVAYVGSKTHIFDGLSFCGLKIQALEVNYADIPIVVMTESVKPMKK 745
Query: 341 ----LHKMVVENGG-TFSMNLNNSVTHCVAADNKGLKYEAAKRRG--DVIHYSWVLDCCS 393
L +++ NGG + N T+C+ AD + +K + ++ G +VI W+ DC S
Sbjct: 746 SKADLEQLIKANGGKIYQTNNAAKDTYCI-ADRRTVKVASLQKSGLENVIRPCWISDCIS 804
Query: 394 QKK--------LLQLQPKYYLHLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNVDR 445
Q + LL L+P++ + K+++ VD++ D + D ++A++ ++L +D
Sbjct: 805 QNEHDTGESSILLPLEPRHMFFTKEDQKEEISNNVDKYDDSFARDTNIAELTEILHKMDV 864
Query: 446 SED---PKTIDYYKKKYCPQDKWSCFHGCCIYF----YHSTEPLSPDWEVLLGLALR-RL 497
D + +D D+ F I+F + S+ P P + GL++R +L
Sbjct: 865 ISDISGEERLDIMSDLTLDGDQGWLFKNLTIFFAPCGHLSSVPGEP---CVDGLSIRQQL 921
Query: 498 KLEI-SFHGGKVCNNLAN--ATHVVVLSVLGYDVNFNSLTESFTAREKHLLWNKKLHVVR 554
I +F G V + N THV+V D+ T R + H V
Sbjct: 922 ARNITTFTGATVTDQQKNNRITHVIVDPSEDRDLETGKTKNYTTLRSEFATRRTIPHFVT 981
Query: 555 SQWLEDCLA-KEQKSEEYEYSL 575
QW+E+C K EE YS+
Sbjct: 982 VQWVEECWKEKTLVDEERTYSM 1003
>gi|348688552|gb|EGZ28366.1| hypothetical protein PHYSODRAFT_284249 [Phytophthora sojae]
Length = 968
Score = 167 bits (422), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 128/502 (25%), Positives = 234/502 (46%), Gaps = 65/502 (12%)
Query: 76 ETIENRDEGIVLKDLGSKWEPGD---RSGKWLKLKPEYIRAGSDLDVLIIGGYYGSG-RR 131
E + N EG+++KDL + + G+ ++ KWLKLKP+Y +DLD +IIGG+YG G RR
Sbjct: 424 EQVSNGGEGVIMKDLNAHYMCGESSRKTKKWLKLKPDYAGMTTDLDAIIIGGFYGVGRRR 483
Query: 132 GGEVAQFLVAL----------AERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYF 181
G V+ FL+ + A+ P +F +VGTG + +EL+ + +L+PY+
Sbjct: 484 SGNVSVFLLGVLAHSLDENSAAKATEPGAACPTVYTFAKVGTGYNLDELEQMRQELEPYW 543
Query: 182 RKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFP 241
+ ++ P S RPDVWI+ P S IL + + ++S ++RFP
Sbjct: 544 QPWDDDNIPPHLNGWKPQKSDLRPDVWID-PRHSKILEVYG-FELSFTTLYSTGLTIRFP 601
Query: 242 RIDRVRYDKPWHDCLDVQSFVELVHSSNG--TTQKGKEYGGLQDDKPKQFRSSRKGEKKN 299
R +R DK W+ C+++Q +++ G +T++ E Q + + + +
Sbjct: 602 RCKAIRNDKEWYQCINLQDL----NAARGSLSTKRASEVALGQKTATGRVKKRQTISSRR 657
Query: 300 VSIVPSHFLQTDVSDIKGETSIFSDMVFYFV----NVPPAYSLDSLHKMVVEN------- 348
S V + + D+ I+ E ++F F + PP+ + ++ +VE+
Sbjct: 658 PSGVLQGYSRADLEGIEQERNVFEGKEFCVLPGKYEAPPSDVVPAIPSGIVEDNAKQLSK 717
Query: 349 ----------GGTFSMNLNNSVTHCVAADNKGLKYEAAKRRG--DVIHYSWVLDCCSQKK 396
GGT N S + VAA + G K K++G +++H W+ C + +
Sbjct: 718 QTVEKLLHAFGGTIVQNPIESTDYVVAAGDAGFKVVNLKKQGLFNIVHIRWIFTCVAVAR 777
Query: 397 LLQLQPKYYLHLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQL-------------LSNV 443
L+ L+ +++ +DS ++ L +E D + D + + AD++++ L+
Sbjct: 778 LISLKAGDFVYATDSQRELLAKEYDHYGDHFTEHIGPADLRRIIRELSSAYMSENRLAAG 837
Query: 444 DRSEDPKTIDYYKKKYCPQDKWSC----FHGCCIYFYHSTEPLSPDWEVLLGLALRRLKL 499
+R P + + + C C +YF H + D +LLG + L+
Sbjct: 838 ERHPQPWQVQMKDLEMEEAEAMDCEYTFLAHCVVYFQHFSNDADAD-ALLLG-QTKLLEQ 895
Query: 500 EISFHGGKVCNNL-ANATHVVV 520
++ +GG V + ++ THVVV
Sbjct: 896 QLRLYGGVVAGEIDSSVTHVVV 917
>gi|145530083|ref|XP_001450819.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124418452|emb|CAK83422.1| unnamed protein product [Paramecium tetraurelia]
Length = 944
Score = 167 bits (422), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 119/421 (28%), Positives = 207/421 (49%), Gaps = 21/421 (4%)
Query: 43 SQLRSQIMAADQTGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGK 102
S L+ I+ E + + +E+ + F IE EGI++K + S++ P +RS K
Sbjct: 414 SLLQRIIVPIPNQLEVVQAATIKSFEELIQQFDMAIERNQEGIIIKQMDSQYLPNERSTK 473
Query: 103 WLKLKPEYIRAGSD-LDVLIIGGYYGSGRRGGE-------VAQFLVALAERPAPDTYPRR 154
W+K+K +Y+ +D D+L+IGGY+G+ E + FL+ LA++ +
Sbjct: 474 WVKMKGDYVENMTDNCDLLVIGGYFGTQSHRVETFDEFDRITHFLMGLAQKIDKNQPTNS 533
Query: 155 FI-SFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE 213
I F +VGTG +D EL + KL+ ++ K + P P ++ N +RPDV+I +P
Sbjct: 534 VILPFVKVGTGFTDNELSTIRNKLRNHWIKKQKPNYIPQNWNPGVN---DRPDVYINNPA 590
Query: 214 KSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGT-- 271
SII + + +S F Y+LRFPR + R DK W++ + Q +++ S T
Sbjct: 591 HSIIFEVKA-AEITKSNTFPTDYTLRFPRCYKTRMDKDWYEMMTTQDLSSMINDSQYTKN 649
Query: 272 --TQKGKEYGGLQ-DDKPKQFRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFY 328
+ KE Q DD+ KQ K ++I+ + F D +I E+++F F+
Sbjct: 650 LKKKNDKEGNDKQTDDERKQPLKKGGAHSKQITIM-TEFQGLDPRNITKESNLFVGCEFF 708
Query: 329 FVNVPPAYSLDSLHKMVVENGGTFSMN-LNNSVTHCVAA-DNKGLKYEAAKRRGDVIHYS 386
VN+ Y+ L +V+ GGT N + SVTH VA+ + + K +I
Sbjct: 709 IVNLEEDYNKQYLESIVLAQGGTCIQNYIVESVTHVVASIIDFRVNSIIEKFPTTIIRPQ 768
Query: 387 WVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNVDRS 446
W+++C + +L+ + P++ L + ++ + D F D YF +D +K + N+ +
Sbjct: 769 WIIECIRRSQLVNIAPRFILFAPLAIMNEVNKFYDRFGDSYFELIDDLALKDICDNMKIN 828
Query: 447 E 447
E
Sbjct: 829 E 829
>gi|121713768|ref|XP_001274495.1| DNA ligase, putative [Aspergillus clavatus NRRL 1]
gi|119402648|gb|EAW13069.1| DNA ligase, putative [Aspergillus clavatus NRRL 1]
Length = 1029
Score = 166 bits (421), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 120/401 (29%), Positives = 199/401 (49%), Gaps = 38/401 (9%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLII 122
A DEVE ++ + EG+VLK+ S + +R W+K+KPEY+ G LD+++I
Sbjct: 471 ATTKDEVEVALRKVVAEASEGLVLKNPRSPYRLNERHDDWMKVKPEYMTEFGESLDLIVI 530
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTY------PRRFISFCRVGTGLSDEELDAVVTK 176
GGY+GSGRRGG ++ FL L A DT+ + SFC+VG G + + +
Sbjct: 531 GGYFGSGRRGGNLSSFLCGLR---ADDTHASQGSNASKCYSFCKVGGGFNAADYANIRHH 587
Query: 177 LKPYFRKYEYPKRAPPSFYQVTNNSK--ERPDVWIESPEKSIILSITSDIRTIRSEVFSA 234
+ ++ PK+ P ++ ++ ERPD+WI+ PE S+++ + + ++ S+ F
Sbjct: 588 TDGKWVEWN-PKKPPTAYIELAGKDAQYERPDMWIK-PEDSVVVCVKAASVSV-SDQFRI 644
Query: 235 PYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRK 294
+LRFPR R+R DK W L VQ F++L S+ + KE+ FR R
Sbjct: 645 GLTLRFPRFKRLRMDKDWRSALSVQGFLDL-KSNVEQEHREKEFS------VDNFRRKRI 697
Query: 295 GEKKNVSIVPSHFLQTDVSDIKGETS-IFSDMVFYFV---NVPPAYSLDSLHKMVVENGG 350
+ + + + + G + IF + FY + N P S L ++V NGG
Sbjct: 698 KRTTKKPLAVAGYDADEEAKYAGPSGHIFEGLNFYILTDANAPVKKSKQELEQLVKANGG 757
Query: 351 TFSMNLNNSVTHCVA-ADNKGLKYEAAKRRG--DVIHYSWVLDCCSQKK--------LLQ 399
F NN+ H V AD + +K + ++ G D+I SW+LDC Q + LL
Sbjct: 758 KF-YQTNNAAPHTVCIADRRTVKAASLQKSGNVDIIRPSWLLDCVKQNEIDAGLPDLLLP 816
Query: 400 LQPKYYLHLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLL 440
++PK+ ++++ VD+F+D Y + ++K +L
Sbjct: 817 MEPKHMFFARPEKQEEVAANVDQFNDSYARNTTSEELKNVL 857
>gi|315044541|ref|XP_003171646.1| DNA ligase 4 [Arthroderma gypseum CBS 118893]
gi|311343989|gb|EFR03192.1| DNA ligase 4 [Arthroderma gypseum CBS 118893]
Length = 996
Score = 166 bits (419), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 133/543 (24%), Positives = 254/543 (46%), Gaps = 66/543 (12%)
Query: 63 VAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLI 121
V + ++E ++ + EG+VLK+ S + +R+ W+K+KP+Y+ G +D ++
Sbjct: 460 VGTSASDIEPLLRKVVAEASEGLVLKNPNSPYRLNERNDDWMKVKPDYMTEFGESMDCIV 519
Query: 122 IGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYF 181
+GGYYGSG+RGG ++ +L L P + SFC+VG G + + + +
Sbjct: 520 VGGYYGSGKRGGNISSYLCGLRVDAQDGANPMKCYSFCKVGGGFTAADYANIRHHTDGKW 579
Query: 182 RKYEYPKRAPPSFYQVT--NNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLR 239
+ PK+ P + ++ + ERPDVWI+ P+ S+++ + + T S+ F ++R
Sbjct: 580 HDWN-PKKPPTEYIELAGCDAQHERPDVWIK-PDDSVVVCVKAAAVT-PSDQFRLGLTVR 636
Query: 240 FPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKN 299
FPR R+R DK W L VQ F++L + G Q+ K +F+ +G+K
Sbjct: 637 FPRFKRLRMDKDWQSALSVQEFMDL------------KAGAEQEKKDNEFQVESRGKKAK 684
Query: 300 VS----IVPSHFLQTDVSDIKGETSIFSDMVFYFVN---VPPAYSLDSLHKMVVENGG-T 351
S ++ + + V+ + G+ IF + F+ ++ P S L +++ NGG
Sbjct: 685 RSKKKELIIAGSGEAKVAYVGGKAHIFDGLSFFVMSESLKPTKKSKADLEQLIKANGGKI 744
Query: 352 FSMNLNNSVTHCVAADNKGLKYEAAKRRG--DVIHYSWVLDCCSQKK--------LLQLQ 401
+ N + T+C+ AD + +K + ++ +VI SW+ DC Q + LL L+
Sbjct: 745 YQTNTASKNTYCI-ADRRTVKVASLQKSALENVIRPSWIFDCIEQNELDTGEDDVLLPLE 803
Query: 402 PKYYLHLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNVDRSEDPKT----IDYYKK 457
P++ + K+++ + VD + D + + + ++ +L ++ + D + +D
Sbjct: 804 PRHMFFTKEDQKEEISKNVDRYDDSFARNTTIPELTAILQKMNLASDDISEEDRLDIMSD 863
Query: 458 KYCPQDKWSC--------FHGCCIYFYHSTEPLS-PDWEVLLGLALRR--LKLEISFHGG 506
+D+ S F ++F +P S P + L++R+ + + F G
Sbjct: 864 LSLDRDQGSADNFVAGWLFKDLTMFFVPCNQPPSAPGRPCIERLSIRQQLARNTVIFTGA 923
Query: 507 KVCNNLAN--ATHVVVLSV------LGYDVNFNSLTESFTAREKHLLWNKKLHVVRSQWL 558
V ++ N THV+V G ++++L F +R H V QW+
Sbjct: 924 TVVDDQTNNRITHVIVDPSEDRDPETGKAKSYSALRSGFASRR------PIPHFVTVQWI 977
Query: 559 EDC 561
E+C
Sbjct: 978 EEC 980
>gi|425772167|gb|EKV10581.1| DNA ligase 4 [Penicillium digitatum Pd1]
gi|425777342|gb|EKV15520.1| DNA ligase 4 [Penicillium digitatum PHI26]
Length = 974
Score = 166 bits (419), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 140/528 (26%), Positives = 247/528 (46%), Gaps = 55/528 (10%)
Query: 72 KFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIGGYYGSGR 130
K ++ + EG+VLK+ S + +R W+K+KP+Y+ G LDV++IGGYYGSG
Sbjct: 448 KALRKVVAEASEGLVLKNPRSPYRLNERHDDWMKVKPDYMTEFGESLDVVVIGGYYGSGH 507
Query: 131 RGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRA 190
RGG ++ FL L + + + SFCRVG G + + V + ++ ++ K+
Sbjct: 508 RGGALSSFLCGLRVDDSTQAAEKCW-SFCRVGGGFTAADYQEVRHHTEGKWKVWD-AKKP 565
Query: 191 PPSFYQVTNN--SKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRY 248
P +F ++ ERPD+WI+ P SI+L + I S+ F +LRFPR ++R
Sbjct: 566 PTNFIELAGGDAQHERPDMWIK-PSDSIVLCAKAASVAI-SDQFRMGLTLRFPRFKKLRK 623
Query: 249 DKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFL 308
DK W L VQ F++L S+ + KE+ K + R+++K V +
Sbjct: 624 DKDWKSALSVQEFLDL-KSNAEQEHREKEFSVDNSRKKRVKRATKKP-----LTVAGYDD 677
Query: 309 QTDVSDIKGETSIFSDMVFYFV---NVPPAYSLDSLHKMVVENGGTFSMNLNNSVTHCVA 365
DV ++ IF ++ F+ + P + L ++V NGG +V
Sbjct: 678 NIDVQYLEPSGHIFDELNFFVMTESTSPEKKTKLQLEQLVKANGGKIYQTKTAAVDTLCV 737
Query: 366 ADNKGLKYEAAKRRG--DVIHYSWVLDCCSQKK--------LLQLQPKYYLHLSDSSKKK 415
AD + +K + +R G ++I SW++DC Q + LL +P++ + + +++
Sbjct: 738 ADRRTVKVASLQRSGEQNIIRPSWLIDCIKQNEIDIGLPDLLLPFEPRHMFFMREDEEEE 797
Query: 416 LQEEVDEFSDLYFWDLDLADIKQLLSNVDRSE-------DPKTIDYYKKK--------YC 460
+ VD+F D Y D + ++K++ +++++ DP+TI + + Y
Sbjct: 798 VVANVDQFMDSYARDTTVEELKEVFKQMEQNQEQPDHALDPETIQRVEARIQEKINAGYT 857
Query: 461 PQDKWSCFHGCCIYFYHST----EPLSPD-WEVLLGLALRRLKLEISFHGGKVCNNL--A 513
W F G YF+ + E S + W+ L L R F G + ++L +
Sbjct: 858 VPCGW-LFRGLKFYFHSNGDRQDESASQELWKKSQPLYLARNTAR--FAGAESASSLKSS 914
Query: 514 NATHVVVLSVLGYDVNFNSLTESFTAREKHLLWNKKLHVVRSQWLEDC 561
THV+V + +SL +S + K H+V + W+++C
Sbjct: 915 GTTHVIVDPETLSSADISSLRKSLAEKPG----AKMPHLVSASWVDEC 958
>gi|357575836|gb|AET85548.1| DNA ligase [Aspergillus glaucus]
Length = 1018
Score = 165 bits (417), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 143/567 (25%), Positives = 248/567 (43%), Gaps = 74/567 (13%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLII 122
A E+E + + EG+VLK S + +R W+K+KPEY+ G LD++++
Sbjct: 464 ATTTAEIETALRTVVAEASEGLVLKSPRSPYRLNERHDDWMKVKPEYMTEFGESLDLIVV 523
Query: 123 GGYYGSGRRGGEVAQFLVAL---AERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 179
G YYGSGRRGG ++ FL L + + T P + SFC+VG G + ++ +
Sbjct: 524 GAYYGSGRRGGSLSSFLCGLRVDGAQSSQSTNPMKCYSFCKVGGGFNAQDYANIRHHTDG 583
Query: 180 YFRKYEYPKRAPPSFYQVTNNSK--ERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYS 237
+ ++ PK+ P ++ ++ ERPDVWI P+ S++L + + ++ S+ F +
Sbjct: 584 KWMDWD-PKKPPMTYIELAGGDAQYERPDVWIR-PDDSVVLCVKAASVSV-SDQFRMGLT 640
Query: 238 LRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEK 297
LRFPR R+R DK W L VQ F++L S+ K KE+ K + R++++ +
Sbjct: 641 LRFPRFKRLRSDKDWKTALSVQEFLDL-KSNVEQEHKEKEFSVDNSRKKRVKRTTKRPLE 699
Query: 298 KNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFV---NVPPAYSLDSLHKMVVENGGTFSM 354
+ + +V + IF + FY + +VP S L +V NG F
Sbjct: 700 -----IAGYNADKEVGYVGPSGRIFEGLSFYILTDSSVPEKKSKAELEHLVKANGDKFFQ 754
Query: 355 NLNNSVTHCVAADNKGLKYEAAKRRG--DVIHYSWVLDCCSQKK--------LLQLQ--- 401
+ AD + +K + ++ G D+I SW++DC Q LL L+
Sbjct: 755 TSTAAPNTICVADRRTVKVASLQKSGEIDIIRPSWLMDCVKQNTVDVGLPDLLLPLEARS 814
Query: 402 ---------------PKYYLHLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLS----- 441
++ ++ + +++++ +D+F+D Y D+ ++K +L
Sbjct: 815 AYTCTFPGVEIELTRARHMFFMTANKQEEVESNLDQFNDSYARDMTANELKDILEQMSKK 874
Query: 442 -NVDRSEDPKTIDYYKKK--------YCPQDKWSCFHGCCIYFYHSTEPLSPDWEVLLGL 492
N D S+ P TI ++ Y W F G YF H + + + L
Sbjct: 875 YNFDSSQCPDTITKITERIQERASTGYETPIGW-LFKGLTFYFNHPQTEETKETDQAQSL 933
Query: 493 ALRRLKLEISFHGGKVCNNLAN--ATHVVV---LSVLGYDVNFNSLTESFTAREKHLLWN 547
+ F G + ++ + THV++ G SL R
Sbjct: 934 RTVAMANIARFAGADIASDTGDKSITHVIMDPDTPAAGISAFRGSLAARGAGR------- 986
Query: 548 KKLHVVRSQWLEDCL-AKEQKSEEYEY 573
K H+V ++W+E+ AK EE E+
Sbjct: 987 KVPHIVTNKWIEESWDAKTLLDEESEF 1013
>gi|302511101|ref|XP_003017502.1| hypothetical protein ARB_04383 [Arthroderma benhamiae CBS 112371]
gi|291181073|gb|EFE36857.1| hypothetical protein ARB_04383 [Arthroderma benhamiae CBS 112371]
Length = 1020
Score = 164 bits (414), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 151/575 (26%), Positives = 259/575 (45%), Gaps = 71/575 (12%)
Query: 63 VAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLI 121
V + ++E ++ + EG+VLK+ S + +R+ W+K+KP+Y+ G LD ++
Sbjct: 456 VGKSASDIEPLLRKVVAEASEGLVLKNPNSPYRLNERNDDWMKVKPDYMTEFGESLDCIV 515
Query: 122 IGGYYGSGRRGGEVAQFLVALA--ERPAPD-TYPRRFISFCRVGTGLSDEELDAVVTKLK 178
+GGYYGSG+RGG ++ +L L + A D T P + SFC+VG G + + +
Sbjct: 516 VGGYYGSGKRGGNISSYLCGLRVDDTHAEDGTNPMKCYSFCKVGGGFTAADYANIRHHTD 575
Query: 179 PYFRKYEYPKRAPPSFYQVTNN--SKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPY 236
+ ++ PK+ P + ++ ERPDVWI+ P+ SI++ + + T S+ F
Sbjct: 576 GKWHDWD-PKKPPTEYIELAGGDAQHERPDVWIK-PDDSIVVCVKAAAVT-PSDQFRLGL 632
Query: 237 SLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGE 296
++RFPR R+R DK W L VQ F++L G Q+ KE +D + R +
Sbjct: 633 TVRFPRFKRLRMDKDWQSALSVQEFMDL---KAGAEQEKKE----KDFQVDNSRRKKTKR 685
Query: 297 KKNVSIVPSHFLQTDVSDIKGETSIFSDMVF--------------YFVNV------PPAY 336
K + + + +V+ + +T IF + F F+ V P
Sbjct: 686 SKKKELTVAGSGEPNVAYVGSKTHIFDGLSFCGLKIQALEVNYANIFIVVMTESVKPMKK 745
Query: 337 SLDSLHKMVVENGG-TFSMNLNNSVTHCVAADNKGLKYEAAKRRG--DVIHYSWVLDCCS 393
S L +++ NGG + N T+C+ AD + +K + ++ G +VI W+ DC S
Sbjct: 746 SKADLEQLIKANGGKIYQTNNAAKDTYCI-ADRRTVKVASLQKSGLENVIRPCWISDCIS 804
Query: 394 QKK--------LLQLQPKYYLHLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNVDR 445
Q + LL L+P++ + K+++ VD++ D + D +A++ ++L +D
Sbjct: 805 QNEHDIGESSILLPLEPRHMFFTKEDQKEEISNNVDKYDDSFARDTSIAELTEILHKMDA 864
Query: 446 SED---PKTIDYYKKKYCPQDKWSC--------FHGCCIYF----YHSTEPLSPDWEVLL 490
D + +D D+ S F I+F + S+ P P +
Sbjct: 865 ISDISGEERLDIMSDLTLDGDQGSVHSDVEGWLFKNLTIFFAPCSHLSSVPGEP---YVD 921
Query: 491 GLALR-RLKLEIS-FHGGKVCNNLAN--ATHVVVLSVLGYDVNFNSLTESFTAREKHLLW 546
L++R +L I+ F G V + N THV+V D T R +
Sbjct: 922 ALSIRQQLARNITIFTGATVTDQQKNNRITHVIVDPSADRDPETGKAKNYTTLRSEFATR 981
Query: 547 NKKLHVVRSQWLEDCLA-KEQKSEEYEYSLKPTGM 580
H V QW+E+C K EE YS+ +
Sbjct: 982 RAIPHFVTVQWVEECWKEKTLVDEERMYSMPAIAL 1016
>gi|50551271|ref|XP_503109.1| YALI0D21384p [Yarrowia lipolytica]
gi|74634313|sp|Q6C8A3.1|DNLI4_YARLI RecName: Full=DNA ligase 4; AltName: Full=DNA ligase IV; AltName:
Full=Polydeoxyribonucleotide synthase [ATP] 4
gi|49648977|emb|CAG81303.1| YALI0D21384p [Yarrowia lipolytica CLIB122]
Length = 956
Score = 163 bits (413), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 117/389 (30%), Positives = 196/389 (50%), Gaps = 19/389 (4%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLII 122
A E+E ++ I EG+V+KD S + R WLK+KPEY+ G LDV+II
Sbjct: 457 ATTAAEIETCMRKIIAESSEGLVIKDPTSVYRVNTRDDSWLKMKPEYMSEFGEKLDVVII 516
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
GGYYGSG+RG ++ +L L + +F SF +VG GL+ + A+ TK + ++
Sbjct: 517 GGYYGSGKRGSILSSYLCGLRADGSD-----QFWSFFKVGGGLTAGDYQAIRTKTEGKWK 571
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
+++ + N ERPDVWIE P S+++ + + + S+ + LRFPR
Sbjct: 572 RWDKNDKPKNVLLAGPNGDLERPDVWIE-PSDSVVVEVKA-ASVVASDQYKVGLCLRFPR 629
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSI 302
+R DK W D L + F EL + + KE L+D K + R ++ ++
Sbjct: 630 FRALRLDKTWEDGLTISQFAELRQTVEMEAEN-KELE-LEDRKRRNAGPGRGAKRLKLAN 687
Query: 303 VPSHFLQTDVSDIKGETSIFSDMVFYFVN---VPPAYSLDSLHKMVVENGGTFSMNLNNS 359
V S + ++ + TS+F F ++ P S ++ ++ ++GGT +
Sbjct: 688 VSSD--EDELGTDERPTSVFKATSFAVLSDMSSPRYMSKAAVENLIKKHGGTVFQTVEGP 745
Query: 360 VTHCVAADNKGLKYEAAKRRG---DVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKL 416
T VA D + +K +A +R DVI +W+LDC +++KL+ L+P+ L S +
Sbjct: 746 HTIPVA-DTRTIKVQALTKRVHGVDVIRPNWLLDCINEEKLVALEPRNLLESSAETLALA 804
Query: 417 QEEVDEFSDLYFWDLDLADIKQLLSNVDR 445
+ VDEF D Y L +++++L +D+
Sbjct: 805 KTNVDEFGDSYTRPLTYKEMQEVLRFMDQ 833
>gi|302410543|ref|XP_003003105.1| DNA ligase [Verticillium albo-atrum VaMs.102]
gi|261358129|gb|EEY20557.1| DNA ligase [Verticillium albo-atrum VaMs.102]
Length = 944
Score = 163 bits (412), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 144/557 (25%), Positives = 253/557 (45%), Gaps = 52/557 (9%)
Query: 45 LRSQIMAADQTGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWL 104
LR ++ + E A + D +E ++ + EG+VLK+ S + R+ WL
Sbjct: 414 LRKAVIGVHRRIEVHEHEAATSADAIEPLLRKVVAEASEGLVLKNPRSMYRLNSRNDDWL 473
Query: 105 KLKPEYI-RAGSDLDVLIIGGYYGSGRRGGEVAQFLVAL---AERPAPDTYPRRFISFCR 160
K+KPEY+ G LD ++IGGYYGSG+RGG ++ +L L P + S +
Sbjct: 474 KVKPEYMTEFGESLDCVVIGGYYGSGKRGGILSTYLCGLRVSENHIKAGANPEKCFSLFK 533
Query: 161 VGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSI 220
VG G S E+ + ++ ++ PK+ P + ++ + E+PDVWI + ++ +
Sbjct: 534 VGGGFSVEDYAEIRHHTDGKWKDWD-PKKPPNEYIELAHGFAEKPDVWIRPKDSFVLEAK 592
Query: 221 TSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGG 280
S + S+ F+ ++LRFPR ++R DK W L VQ F +L Q ++
Sbjct: 593 ASSVGP--SDQFALGFTLRFPRFRKLRKDKSWDQGLSVQEFQDLRRRVEEEAQ--EKTMS 648
Query: 281 LQDDKPKQFRSSRKGEKKNVSIVPSHFLQTDVSDIK--GETS-IFSDMVFYFVN---VPP 334
+++ K R + K KK + I TD + ++ GE S +F + F ++ P
Sbjct: 649 VENTK----RRAVKRVKKELVIA-----GTDSTPVQFEGEKSKVFEGLEFCVLSESLKPF 699
Query: 335 AYSLDSLHKMVVENGGTFSMNLNNSVTHCVAADNKGLKYEAAKRRGDV--IHYSWVLDCC 392
+ L + NGG + + AD + + + ++GDV I +WV DC
Sbjct: 700 KKTKTQLETTIKANGGRITQRHAARSDLILIADKRVVSVASLIKKGDVDIIRPNWVQDCL 759
Query: 393 SQKK---LLQLQPKYYLHLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNVDRSEDP 449
+Q+ LL + ++ H ++ ++ ++ DEF D YF +D+ +++Q+L ++ E
Sbjct: 760 AQETDDGLLPYEERHLFHATEGLREIARQNTDEFGDSYFRIVDVEELRQILVDMSPHEKS 819
Query: 450 KTIDYYKKKYCPQ---------DKWSCFHGCCIYFYHSTEPLSPDWEVLLG--LALRRLK 498
+ D ++ Q ++ S G C+ H VL G L RL+
Sbjct: 820 EERDEDAAEFARQLKERGNDLGERDSAVFGRCVVHLH----------VLPGGELDAFRLR 869
Query: 499 LEISFHGGKVCNNLANATHVVVLSVLGYDVNFNSLTESFTAREKHLLWNKKLHVVRSQWL 558
I+F GG+V + L + ++ V G D + + R+ K VV SQW+
Sbjct: 870 NYIAFGGGEVTDGLPVDSSTHIMLVGGRDAEKQD--AAVSVRKDIGNRQKIPRVVASQWV 927
Query: 559 EDCLAKEQKSEEYEYSL 575
ED + +E Y +
Sbjct: 928 EDSWKERTMLDEERYRV 944
>gi|296809888|ref|XP_002845282.1| DNA ligase 4 [Arthroderma otae CBS 113480]
gi|238842670|gb|EEQ32332.1| DNA ligase 4 [Arthroderma otae CBS 113480]
Length = 1001
Score = 162 bits (411), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 138/559 (24%), Positives = 259/559 (46%), Gaps = 61/559 (10%)
Query: 63 VAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLI 121
V + ++E ++ + EG+VLK+ S + +R+ W+K+KP+Y+ G LD ++
Sbjct: 459 VGRSASDIEPLLRKVVAEASEGLVLKNPNSPYRLNERNDDWMKVKPDYMTEFGESLDCIV 518
Query: 122 IGGYYGSGRRGGEVAQFLVALAERPAPD---TYPRRFISFCRVGTGLSDEELDAVVTKLK 178
+GGYYGSG+RGG ++ +L L + D T P + SFC+VG G + + +
Sbjct: 519 VGGYYGSGKRGGNISSYLCGLRVDDSHDQQGTNPMKCYSFCKVGGGFTAADYANIRHHTD 578
Query: 179 PYFRKYEYPKRAPPSFYQVTNNSK--ERPDVWIESPEKSIILSITSDIRTIRSEVFSAPY 236
+ ++ KR P F ++ ERPDVWI+ P+ S++L + + T S+ F
Sbjct: 579 GKWHDWD-AKRPPTEFIELAGGDAQYERPDVWIK-PDDSVVLCVKAAAVT-PSDQFRLGL 635
Query: 237 SLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGE 296
++RFPR R+R DK W L +Q F++L G Q+ KE D+ ++ + E
Sbjct: 636 TVRFPRFKRLRMDKDWKSALSIQEFMDL---KAGAEQERKEKDFQVDNSRRKKIKRSRKE 692
Query: 297 KKNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFVN---VPPAYSLDSLHKMVVENGG-TF 352
+++ S Q + + + F + F+ ++ P S L +++ NGG +
Sbjct: 693 ---LTVAGSG--QAKAAYLGEKGHAFDGLSFFVMSESLKPVKKSKADLEQLIKANGGKIY 747
Query: 353 SMNLNNSVTHCVAADNKGLKYEAAKRRG--DVIHYSWVLDCCSQKK--------LLQLQP 402
+ + T+C+ AD + +K + ++ +VI W+ DC Q + LL L+P
Sbjct: 748 QTHTASKNTYCI-ADRRTVKVASLQKAAIENVIRPCWIFDCIEQSEHDIGEDGVLLPLEP 806
Query: 403 KYYLHLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNV----DRSEDPK-------T 451
++ ++ K+++ VD+++D Y + + ++ ++L + D S + +
Sbjct: 807 RHMFFTTEDQKEEIANNVDKYADSYARNTTIEELTEVLRKMPVISDVSAEQRLDIMSDFA 866
Query: 452 IDYYKKKYCPQDKWSCFHGCCIYFYHSTEPLS-PDWEVLLGLALRR--LKLEISFHGGKV 508
+D+++ W I+FY ++P P GL++R+ + F G V
Sbjct: 867 LDFHEGAAYNVAGW-LLKDFTIFFYPCSKPSKVPSEPCANGLSMRQQLARNTAIFTGATV 925
Query: 509 CNNLAN--ATHVVVLSV------LGYDVNFNSLTESFTAREKHLLWNKKLHVVRSQWLED 560
++L N THV+V G N++ L F +R H V +W+E+
Sbjct: 926 TDHLDNNRITHVIVDPSEDRDPETGKAKNYDVLRSEFASRR------AIPHFVTVRWIEE 979
Query: 561 CLAKEQKSEEYEYSLKPTG 579
C ++ +E + G
Sbjct: 980 CWKEKTLVDEERFPAPKVG 998
>gi|346971104|gb|EGY14556.1| DNA ligase [Verticillium dahliae VdLs.17]
Length = 1012
Score = 162 bits (411), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 152/604 (25%), Positives = 272/604 (45%), Gaps = 83/604 (13%)
Query: 2 VFELFAQLMTLSVLHDKDNACNISTVAMNDGICVCVHVYMLSQLRSQIMAADQTGEPCWS 61
+ L Q +T L D+ NA + + V ++ I V H
Sbjct: 462 ILYLNDQPLTRYTLRDRYNALSKAVVGVHRRIEVHEHE---------------------- 499
Query: 62 LVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVL 120
A + D +E ++ + EG+VLK+ S + R+ WLK+KPEY+ G LD +
Sbjct: 500 -AATSADAIEPLLRKVVAEASEGLVLKNPRSMYRLNSRNDDWLKVKPEYMTEFGESLDCV 558
Query: 121 IIGGYYGSGRRGGEVAQFLVAL---AERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
+IGGYYGSG+RGG ++ +L L P + S +VG G S E+ +
Sbjct: 559 VIGGYYGSGKRGGILSTYLCGLRVGENHIKAGANPEKCFSLFKVGGGFSVEDYAEIRHHT 618
Query: 178 KPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYS 237
++ ++ PK+ P + ++ + E+PDVWI + ++ + S + S+ F+ ++
Sbjct: 619 DGKWKDWD-PKKPPNEYIELAHGFAEKPDVWIRPKDSFVLEAKASSVGP--SDQFALGFT 675
Query: 238 LRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEK 297
LRFPR ++R DK W L VQ F +L Q ++ +++ K R + K K
Sbjct: 676 LRFPRFRKLRKDKSWDQGLSVQEFQDLRRRVEEEAQ--EKTMSVENTK----RRAVKRVK 729
Query: 298 KNVSIVPSHFLQTDVSDIK--GETS-IFSDMVFYFVN---VPPAYSLDSLHKMVVENGGT 351
K + I TD + ++ GE S +F + F ++ P + L M+ NGG
Sbjct: 730 KELVIA-----GTDSTPVQFEGEKSKVFEGLEFCVLSESLKPFKKTKTQLETMIKANGGR 784
Query: 352 FSMNLNNSVTHCVAADNKGLKYEAAKRRGDV--IHYSWVLDCCSQKK---LLQLQPKYYL 406
+ + AD + + + ++GDV I +WV DC +Q+ LL + ++
Sbjct: 785 ITQRHAARSDLILIADKRVVSVASLIKKGDVDIIRPNWVQDCLAQETDDGLLPYEERHLF 844
Query: 407 HLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNVDRSEDPKTIDYYKKKYCPQDK-- 464
H ++ ++ ++ DEF D YF +D+ +++Q+L ++ E+ + + ++ Q K
Sbjct: 845 HATEGLREIARQNTDEFGDSYFRIVDVEELRQILGDMPPHEESEGREEGAAEFARQLKER 904
Query: 465 --------WSCFHGCCIYFYHSTEPLSPDWEVLLG--LALRRLKLEISFHGGKVCNNLA- 513
+ F C ++ + VL G L RL+ I+F GG+V + L
Sbjct: 905 GNDLGERDSAIFDRCVVHLH-----------VLPGGELDAFRLRNYIAFGGGEVTDGLPV 953
Query: 514 -NATHVVVLSVLGYDVNFNSLTESFTAREKHLLWNKKL-HVVRSQWLEDCLAKEQKSEEY 571
++TH+V++ G D S K + +K+ VV +QW+ED + +E
Sbjct: 954 DSSTHIVLVG--GQDAEKQDAAVSV---RKDIGRRRKIPRVVDAQWVEDSWKERTMLDEE 1008
Query: 572 EYSL 575
+ +
Sbjct: 1009 RFGV 1012
>gi|74830325|emb|CAI39048.1| DNA ligase IV [Paramecium tetraurelia]
Length = 957
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 119/434 (27%), Positives = 210/434 (48%), Gaps = 34/434 (7%)
Query: 43 SQLRSQIMAADQTGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGK 102
S L+ I+ E + + +E+ + F IE EGI++K + S++ P +RS K
Sbjct: 414 SLLQRIIVPIPNQLEVVQAATIKSFEELIQQFDMAIERNQEGIIIKQMDSQYLPNERSTK 473
Query: 103 WLKLKPEYIRAGSD-LDVLIIGGYYGSGRRGGE-------VAQFLVALAERPAPDTYPRR 154
W+K+K +Y+ +D D+L+IGGY+G+ E + FL+ LA++ +
Sbjct: 474 WVKMKGDYVENMTDNCDLLVIGGYFGTQSHRVETFDEFDRITHFLMGLAQKIDKNQPTNS 533
Query: 155 FI-SFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE 213
I F +VGTG +D EL + KL+ ++ K + P P ++ N +RPDV+I +P
Sbjct: 534 VILPFVKVGTGFTDNELSTIRNKLRNHWIKKQKPNYIPQNWNPGVN---DRPDVYINNPA 590
Query: 214 KSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGT-- 271
SII + + +S F Y+LRFPR + R DK W++ + Q +++ S T
Sbjct: 591 HSIIFEVKA-AEITKSNTFPTDYTLRFPRCYKTRMDKDWYEMMTTQDLSSMINDSQYTKN 649
Query: 272 --TQKGKEYGGLQ-------DDKPKQFRSSRK-------GEKKNVSIVPSHFLQTDVSDI 315
+ KE Q +D+P + RK K ++I+ + + D +I
Sbjct: 650 LKKKNDKEGNDKQTDDEVENEDRPMRQAKERKQPLKKGGAHSKQITIM-TEYQGLDPRNI 708
Query: 316 KGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMN-LNNSVTHCVAA-DNKGLKY 373
E+++F FY VN+ Y+ L +++ GGT N + SVTH VA+ + +
Sbjct: 709 TKESNLFVGCEFYIVNLEEDYNKQYLESIILAQGGTCIQNYIVESVTHVVASIIDFRVNS 768
Query: 374 EAAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEVDEFSDLYFWDLDL 433
K +I WV++C + +L+ + P++ L + ++ + D+F D YF +D
Sbjct: 769 IIEKFPTTIIRPQWVIECIRRSQLVNIAPRFILFAPLAIMNEVNKFYDKFGDSYFELIDE 828
Query: 434 ADIKQLLSNVDRSE 447
+K + N+ +E
Sbjct: 829 FALKDICDNMKINE 842
>gi|320037449|gb|EFW19386.1| DNA ligase [Coccidioides posadasii str. Silveira]
Length = 985
Score = 162 bits (410), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 139/543 (25%), Positives = 244/543 (44%), Gaps = 51/543 (9%)
Query: 63 VAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLI 121
+ ++ ++E ++ + EG+VLK+ S + DR W+K+KPEY+ G LD ++
Sbjct: 460 IGNSAADIEPQLRKVVAEASEGLVLKNPSSPYRLNDRHDDWMKVKPEYMTEFGESLDCVV 519
Query: 122 IGGYYGSGRRGGEVAQFLVALAERPA---PDTYPRRFISFCRVGTGLSDEELDAVVTKLK 178
IGGYYGSG+RGG +A FL L A P + SF +VG G + + +
Sbjct: 520 IGGYYGSGKRGGGLASFLCGLRVDEAQVRQGASPMKCYSFLKVGGGFTAPDYANIRHHTD 579
Query: 179 PYFRKYEYPKRAPPSFYQVTNNSK--ERPDVWIESPEKSIILSITSDIRTIRSEVFSAPY 236
++ + PK+ P F ++ ERPDVWI P++S++L + + T S+ F
Sbjct: 580 GKWKDWN-PKKPPTEFIELAGGDAQYERPDVWIR-PDESVVLCVKAASVT-PSDQFRLGL 636
Query: 237 SLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGE 296
++RFPR R+R DK W L +Q F++L ++ QK KE+ + +SR+
Sbjct: 637 TVRFPRFKRLRMDKDWKSALSIQEFMDLKANAE-REQKEKEF---------KIDNSRRKR 686
Query: 297 KKNVSIVPSHFLQTDVSDIKGETS----IFSDMVFYFVNVPPAYSLDS---LHKMVVENG 349
K P D S G T +F M F+ + S L +++ NG
Sbjct: 687 AKRAVKKPLTIAGYDESKRAGFTGPSGHVFEGMNFFVITDSVELEKKSKLELEQLIKANG 746
Query: 350 GTFSMNLNNSVTHCVAADNKGLKYEAAKR--RGDVIHYSWVLDCCSQKK--------LLQ 399
G + A+ + +K + ++ + +I SW+ DC Q + L+
Sbjct: 747 GKIYQTHTAAPNTLCIAERRTVKVASVQKVAKESIIRPSWLFDCIKQNEIDKGLPDLLIP 806
Query: 400 LQPKYYLHLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNVDRSEDPKTIDYYKKKY 459
+P++ S ++++ VDE+SD Y D+ ++ +LL ++ + K +
Sbjct: 807 FEPRHMYFTVKSQEEEIARHVDEYSDSYVRDITPNELSKLLVSMPLIPNLPPPHISKTET 866
Query: 460 CPQDKWSCFHGCCIYFY-----HSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNLAN 514
Q++ S F + + H +P S + +L L LR F G V N L +
Sbjct: 867 QIQERESTFQELRGWLFKNQVLHFVKPRS---DSMLSLPLRLASNLARFAGASVANELED 923
Query: 515 --ATHVVVLSVLGYDVNFNSLTESFTAREKHLLWNKKL-HVVRSQWLEDCLAKEQKSEEY 571
THVV+ + D ++ +A K + +++ H+V W++D E +E
Sbjct: 924 KSITHVVIDT----DSQPADVSALRSAISKRVAAGRRIPHLVTIAWIQDSWKAESLLDEE 979
Query: 572 EYS 574
++
Sbjct: 980 RFA 982
>gi|303314333|ref|XP_003067175.1| DNA ligase I, ATP-dependent family protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240106843|gb|EER25030.1| DNA ligase I, ATP-dependent family protein [Coccidioides posadasii
C735 delta SOWgp]
Length = 985
Score = 162 bits (409), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 139/543 (25%), Positives = 244/543 (44%), Gaps = 51/543 (9%)
Query: 63 VAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLI 121
+ ++ ++E ++ + EG+VLK+ S + DR W+K+KPEY+ G LD ++
Sbjct: 460 IGNSAADIEPQLRKVVAEASEGLVLKNPSSPYRLNDRHDDWMKVKPEYMTEFGESLDCVV 519
Query: 122 IGGYYGSGRRGGEVAQFLVALAERPA---PDTYPRRFISFCRVGTGLSDEELDAVVTKLK 178
IGGYYGSG+RGG +A FL L A P + SF +VG G + + +
Sbjct: 520 IGGYYGSGKRGGGLASFLCGLRVDEAQVRQGASPMKCYSFLKVGGGFTAPDYANIRHHTD 579
Query: 179 PYFRKYEYPKRAPPSFYQVTNNSK--ERPDVWIESPEKSIILSITSDIRTIRSEVFSAPY 236
++ + PK+ P F ++ ERPDVWI P++S++L + + T S+ F
Sbjct: 580 GKWKDWN-PKKPPTEFIELAGGDAQYERPDVWIR-PDESVVLCVKAASVT-PSDQFRLGL 636
Query: 237 SLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGE 296
++RFPR R+R DK W L +Q F++L ++ QK KE+ + +SR+
Sbjct: 637 TVRFPRFKRLRMDKDWKSALSIQEFMDLKANAE-REQKEKEF---------KIDNSRRKR 686
Query: 297 KKNVSIVPSHFLQTDVSDIKGETS----IFSDMVFYFVNVPPAYSLDS---LHKMVVENG 349
K P D S G T +F M F+ + S L +++ NG
Sbjct: 687 AKRAVKKPLTIAGYDESKRAGFTGPSGHVFEGMNFFVITDSVELEKKSKLELEQLIKANG 746
Query: 350 GTFSMNLNNSVTHCVAADNKGLKYEAAKR--RGDVIHYSWVLDCCSQKK--------LLQ 399
G + A+ + +K + ++ + +I SW+ DC Q + L+
Sbjct: 747 GKIYQTHTAAPNTLCIAERRTVKVASVQKVAKESIIRPSWLFDCIKQNEIDKGLPDLLIP 806
Query: 400 LQPKYYLHLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNVDRSEDPKTIDYYKKKY 459
+P++ S ++++ VDE+SD Y D+ ++ +LL ++ + K +
Sbjct: 807 FEPRHMYFTVKSQEEEIARHVDEYSDSYVRDITPNELSKLLVSMPLIPNLPPPHISKTET 866
Query: 460 CPQDKWSCFHGCCIYFY-----HSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNLAN 514
Q++ S F + + H +P S + +L L LR F G V N L +
Sbjct: 867 QIQERESTFQELRGWLFKNQVLHFVKPRS---DSMLSLPLRLASNLARFAGASVANELED 923
Query: 515 --ATHVVVLSVLGYDVNFNSLTESFTAREKHLLWNKKL-HVVRSQWLEDCLAKEQKSEEY 571
THVV+ + D ++ +A K + +++ H+V W++D E +E
Sbjct: 924 KSITHVVIDT----DSQPADVSALRSAISKRVAAGRRIPHLVTIAWIQDSWKAESLLDEE 979
Query: 572 EYS 574
++
Sbjct: 980 RFA 982
>gi|74830330|emb|CAI39049.1| DNA ligase IV [Paramecium tetraurelia]
Length = 957
Score = 162 bits (409), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 119/434 (27%), Positives = 209/434 (48%), Gaps = 34/434 (7%)
Query: 43 SQLRSQIMAADQTGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGK 102
S L+ I+ E + + +E+ + F IE EGI++K + S++ P +RS K
Sbjct: 414 SLLQRIIVPIPNQLEVVQAATIKSFEELIQQFDMAIERNQEGIIIKQMDSQYLPNERSTK 473
Query: 103 WLKLKPEYIRAGSD-LDVLIIGGYYGSGRRGGE-------VAQFLVALAERPAPDTYPRR 154
W+K+K +Y+ +D D+L+IGGY+G+ E + FL+ LA++ +
Sbjct: 474 WVKMKGDYVENMTDNCDLLVIGGYFGTQSHRVETFDEFDRITHFLMGLAQKIDKNQPTNS 533
Query: 155 FI-SFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE 213
I F +VGTG +D EL + KL+ ++ K + P P ++ N +RPDV+I +P
Sbjct: 534 VILPFVKVGTGFTDNELSTIRNKLRNHWIKKQKPNYIPQNWNPGVN---DRPDVYINNPA 590
Query: 214 KSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGT-- 271
SII + + +S F Y+LRFPR + R DK W++ + Q +++ S T
Sbjct: 591 HSIIFEVKA-AEITKSNTFPTDYTLRFPRCYKTRMDKDWYEMMTTQDLSSMINDSQYTKN 649
Query: 272 --TQKGKEYGGLQ-------DDKPKQFRSSRK-------GEKKNVSIVPSHFLQTDVSDI 315
+ KE Q +D+P + RK K ++I+ + F D +I
Sbjct: 650 LKKKNDKEGNDKQTDDEVENEDRPIRQAKQRKQPLKKGGAHSKQITIM-TEFQGLDPRNI 708
Query: 316 KGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMN-LNNSVTHCVAA-DNKGLKY 373
E+++F F+ VN+ Y+ L +V+ GGT N + SVTH VA+ + +
Sbjct: 709 TKESNLFVGCEFFIVNLEEDYNKQYLESIVLAQGGTCIQNYIVESVTHVVASIIDFRVNS 768
Query: 374 EAAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEVDEFSDLYFWDLDL 433
K +I W+++C + +L+ + P++ L + ++ + D F D YF +D
Sbjct: 769 IIEKFPTTIIRPQWIIECIRRSQLVNIAPRFILFAPLAIMNEVNKFYDRFGDSYFELIDD 828
Query: 434 ADIKQLLSNVDRSE 447
+K + N+ +E
Sbjct: 829 LALKDICDNMKINE 842
>gi|307104638|gb|EFN52891.1| hypothetical protein CHLNCDRAFT_138420 [Chlorella variabilis]
Length = 1063
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 131/411 (31%), Positives = 206/411 (50%), Gaps = 34/411 (8%)
Query: 50 MAADQT--GEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDR-SGKWLKL 106
+ AD+T G S +++ + +E + R+EGIV+K L S W DR S WLK+
Sbjct: 429 IPADRTHFGSILASRTGRTEEDISQMLQEIVRLREEGIVIKALDSVWVSNDRHSNNWLKV 488
Query: 107 KPEYIRAGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLS 166
KP+YI A +LD L+IG + G G RGG Q+L+ALA+ P +VGTG
Sbjct: 489 KPDYI-ANIELDCLVIGAWGGKGGRGGHYTQYLLALADDPPAGQ---------QVGTGTD 538
Query: 167 DEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRT 226
E +AV +++P + K PP FY VT +E+P+VWI P++S+++ I++D+RT
Sbjct: 539 RSEWEAVHRQIEPLC--IDASKHPPPCFYSVTG--REKPEVWISDPKESVVVQISADLRT 594
Query: 227 IRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKP 286
IRS F YSLRFP++ VR+DK ++ V + G D
Sbjct: 595 IRSTQFKTGYSLRFPKVHSVRWDKTATIVSSIKDLQGRVEEQKKKDENIDWVKGQDGDTG 654
Query: 287 KQFRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVV 346
K+ R++ K++ +V ++ E+S+ F N ++ L ++V
Sbjct: 655 KKRRTT----KRDKGPAAKRLRGREVVEV--ESSVLEGCHIAFANY-GEHNKRQLEEIVK 707
Query: 347 ENGG--TFSMNLNNSVTHCVAA--DNKGLKYEAAKRRGDVIHYSWVLDCCSQKKLLQLQP 402
+ GG F + VTH +A DNK ++ R DVI W++ C QK+ + L+P
Sbjct: 708 KLGGETRFMFTEGSGVTHILAGREDNKVKAHKEHDR--DVISIDWLVACDRQKRRVPLRP 765
Query: 403 KYYLHLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNVDRSEDPKTID 453
+YY+H+S ++ +VD D Y D+D D+ LL R+ P +D
Sbjct: 766 RYYIHMSRANLIA-NPDVDSLGDSYMSDVDEGDVDNLLH---RAVRPGAVD 812
>gi|260807401|ref|XP_002598497.1| hypothetical protein BRAFLDRAFT_118305 [Branchiostoma floridae]
gi|229283770|gb|EEN54509.1| hypothetical protein BRAFLDRAFT_118305 [Branchiostoma floridae]
Length = 793
Score = 161 bits (407), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 144/511 (28%), Positives = 214/511 (41%), Gaps = 119/511 (23%)
Query: 69 EVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGK-WLKLKPEYIRAGSD-LDVLIIGGYY 126
EV E I+ R+EG+V+K GSK+ P R G WLK+KPEY+ D +DV+I+GGY+
Sbjct: 387 EVIDALNEAIDRREEGLVIKYPGSKYAPDKRKGSGWLKVKPEYVDGLMDQVDVVIVGGYF 446
Query: 127 GSGRRGGEVAQFLVALA-ERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYE 185
G GRR ++ FL A+A + P P F +FCRVG+G + +EL + +L P++R ++
Sbjct: 447 GKGRRSHMISHFLCAVAVQSNTPGDKPALFHTFCRVGSGYTLKELYQMGQRLHPHWRVFD 506
Query: 186 YPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDR 245
K+ P + + KE PDVWI+ PE+S+I+ I + I S+ F +LRFPR+++
Sbjct: 507 -KKKPPKTNIMFPSGYKEAPDVWID-PEQSLIVQIKA-AEIIESDKFKTGCTLRFPRLEK 563
Query: 246 VRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPS 305
VR DK W DC+ ++ DD K
Sbjct: 564 VRDDKEWFDCMTLEEL---------------------DDMRK------------------ 584
Query: 306 HFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMNLNNSVTHCVA 365
VS I F D F +N P + L + VV GGT + T CV
Sbjct: 585 ------VSTI------FEDREFCIINGPLEHGKADLERKVVAYGGTV-VQAPGPDTSCVL 631
Query: 366 ADNKGLKYEAAKRRG--DVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEVDEF 423
A ++ G DV+ W+L C K+ L P + +H+S + + E D
Sbjct: 632 AHKVNVRVNNIISGGKYDVVKADWLLRCWEAKQCLPWLPSHMIHMSPDTAAQFALEFDRH 691
Query: 424 SDLYFWDLDLADIKQLLSNVDRSEDPKTIDYYKKKYCPQDKWSCFHGCCIYFYHSTEPLS 483
+L+ V E + I K CP D
Sbjct: 692 G-------------CMLTTVMLLETSQQI-----KDCPLD-------------------- 713
Query: 484 PDWEVLLGLALRRLKLEISFHGGKVCNNL-ANATHVVVLSVLGYDVNFNSLTESFTAREK 542
+ LE FHG V L ++ TH VL + + + L E R +
Sbjct: 714 ------------LVALEARFHGATVSPILDSDVTH-----VLFHTSDLSRLDEVKALRRQ 756
Query: 543 HLLWNKKLHVVRSQWLEDCLAKEQKSEEYEY 573
KK H+V W+ +C+ E +Y
Sbjct: 757 R---TKKHHLVTPAWVSECIQAGAMLTERDY 784
>gi|242024302|ref|XP_002432567.1| DNA ligase, putative [Pediculus humanus corporis]
gi|212518027|gb|EEB19829.1| DNA ligase, putative [Pediculus humanus corporis]
Length = 891
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 147/521 (28%), Positives = 239/521 (45%), Gaps = 66/521 (12%)
Query: 69 EVEKFFKETIENRDEGIVLKDLGSKWEPGDR-SGKWLKLKPEYIRAGSD-LDVLIIGGYY 126
EV E I+NR+EGIV+K+ S ++P R +G W K+KPEY ++ LD+LIIGGYY
Sbjct: 406 EVIDSLNEAIDNREEGIVMKESMSVYKPNVRKNGGWYKIKPEYTDGLAETLDLLIIGGYY 465
Query: 127 GSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEY 186
G G G V FL+ A + D F S RVG+G S ++L+ + KLKPY+++ +
Sbjct: 466 GRGHLKGSVNHFLLGAAVNVSDDNI--LFYSTGRVGSGYSIKDLEDLSLKLKPYWKEAK- 522
Query: 187 PKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRV 246
R P S KE+PDVWI+ P+KS IL I + + S +F + Y+LRFPR++++
Sbjct: 523 NDRMPLS----VKWGKEKPDVWIK-PDKSYILEIKAS-EIVSSAIFKSGYALRFPRVEKI 576
Query: 247 RYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSH 306
RYDK W +CL + + E+ ++G + +S + S +P
Sbjct: 577 RYDKTWKECLTLHNLEEIAKIASG-----------------KLTASHFSQSNIPSFLPKK 619
Query: 307 FLQTDVSDIKGETSIFSDM-----------VFYFVNVPPAYSLDSLHKMVVENGGTFSMN 355
+T + +I E FS + + F LD L K VVE GG N
Sbjct: 620 KAKTSIWNINSENFDFSGIKCISKLLQGKEICVFSGFKNIKKLD-LEKKVVEFGGKLVKN 678
Query: 356 LNNSVTHCVAADNKGLKYEAAKRRG--DVIHYSWVLDC--CSQKKLLQLQPKYYLHLSDS 411
+ +A + + + + G D+++ S K+ +L+P+++L +S
Sbjct: 679 PGKNTFCILAESDNHTRIKNIIKCGSYDILYSSCFFSFLKIENVKMPKLKPEHFLAMSKG 738
Query: 412 SKKKLQEEVDEFSDLYFWDLDLADIKQLLSNVDRSEDPKTIDYYKKKYCPQD-------- 463
+K++ + D++ D + IK L+ S++ K I + D
Sbjct: 739 TKEEFSKSYDKYGDHFTKKSTFDAIKHSLNAA--SQEGKNIVLTSDEIYEMDVNLFGKTS 796
Query: 464 KWSCFHGCCIYFYHSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNL--ANATHVVVL 521
+S F YF + L L K++ F+GGK + + + THV+ L
Sbjct: 797 PYSIFRNHVGYFDQFKIVSDSSSKFSSDLDL--FKIDFRFYGGKCSDAIDDSTVTHVITL 854
Query: 522 SVLGYDVNFNSLTESFTAREKHLLWNKKLHVVRSQWLEDCL 562
S + N + R+ +K HVV +W+E C+
Sbjct: 855 SSDSSRI--NEINNENHKRK------RKFHVVNEKWIESCI 887
>gi|407927616|gb|EKG20505.1| DNA ligase ATP-dependent [Macrophomina phaseolina MS6]
Length = 1018
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 115/416 (27%), Positives = 202/416 (48%), Gaps = 34/416 (8%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLII 122
AH DE+E + + EG+V+K+ S + R+ W+K+KPEY+ G +LD ++I
Sbjct: 474 AHTPDEIEPLLRNVVAEASEGLVIKNPRSPYRLNQRNDDWIKVKPEYMTEFGEELDCVVI 533
Query: 123 GGYYGSGRRGGEVAQFLVAL-AERPAPD--TYPRRFISFCRVGTGLSDEELDAVVTKLKP 179
GGY+GSG+RGG ++ F+ L ++P D P + SF +VG G++ ++ A+ +
Sbjct: 534 GGYWGSGKRGGNLSSFMCGLRVDQPQIDRGANPMKCYSFFKVGGGMTAQDYAAIRHQTDS 593
Query: 180 YFRKYEYPKRAPPSFYQVTNNSK-----ERPDVWIESPEKSIILSI-TSDIRTIRSEVFS 233
++ + KR P + ++ N S ERPDVWI+ P S+++S+ + + T ++ F
Sbjct: 594 KWQDWNV-KRPPTEYIELANGSSGDRQYERPDVWIK-PCDSVVMSVKAASVGT--TDQFR 649
Query: 234 APYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSR 293
+LRFPR ++R DK W D L +Q F+ L ++ K KE+ + D + K+ R+S+
Sbjct: 650 MGLTLRFPRFKKLRTDKSWKDALSIQDFLALKQNAE-QKHKEKEF-KVDDARRKRLRTSK 707
Query: 294 KGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFVN--VPPAYSLDSLHKMVVENGGT 351
K +T S + +F+ + F + + P S L +G
Sbjct: 708 KRPMTIAGFEEEATTRTATSSLSSAPQVFNGLAFSIMTDCLAPKKSKADLEAFAKAHGAR 767
Query: 352 FSMNLNNSVTHCVAADNKGLKYEAAKRRGD--VIHYSWVLDCCSQKK-----------LL 398
+ + AD + + + +RGD V+ W+LDC Q + LL
Sbjct: 768 IVQSTTAAERVLCIADRRLVSVASVVKRGDRSVVRPVWLLDCVEQAEKDAQQGRTEPFLL 827
Query: 399 QLQ-PKYYLHLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNVDRSEDPKTID 453
+ ++ H +D +E VDE+ D Y D+A ++++ +D E P+ D
Sbjct: 828 PYEGARHLFHATDDDAVAAEENVDEWGDSY--ARDVASVEEMRKIMDAMEMPEGAD 881
>gi|119174468|ref|XP_001239595.1| hypothetical protein CIMG_09216 [Coccidioides immitis RS]
gi|121752757|sp|Q1DKE7.1|DNLI4_COCIM RecName: Full=DNA ligase 4; AltName: Full=DNA ligase IV; AltName:
Full=Polydeoxyribonucleotide synthase [ATP] 4
gi|392869794|gb|EAS28319.2| DNA ligase 4 [Coccidioides immitis RS]
Length = 985
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 139/543 (25%), Positives = 244/543 (44%), Gaps = 51/543 (9%)
Query: 63 VAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLI 121
+ ++ ++E ++ + EG+VLK+ S + DR W+K+KPEY+ G LD ++
Sbjct: 460 IGNSAADIEPQLRKVVAEASEGLVLKNPNSPYRLNDRHDDWMKVKPEYMTEFGESLDCVV 519
Query: 122 IGGYYGSGRRGGEVAQFLVALAERPA---PDTYPRRFISFCRVGTGLSDEELDAVVTKLK 178
IGGYYGSG+RGG +A FL L A P + SF +VG G + + +
Sbjct: 520 IGGYYGSGKRGGGLASFLCGLRVDEAQVRQGASPMKCYSFLKVGGGFTAPDYANIRHHTD 579
Query: 179 PYFRKYEYPKRAPPSFYQVTNNSK--ERPDVWIESPEKSIILSITSDIRTIRSEVFSAPY 236
++ + PK+ P F ++ ERPDVWI P++S++L + + T S+ F
Sbjct: 580 GKWKDWN-PKKPPTEFIELAGGDAQYERPDVWIR-PDESVVLCVKAASVT-PSDQFRLGL 636
Query: 237 SLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGE 296
++RFPR R+R DK W L +Q F++L ++ QK KE+ + +SR+
Sbjct: 637 TVRFPRFKRLRMDKDWKSALSIQEFMDLKANAE-REQKEKEF---------KIDNSRRKR 686
Query: 297 KKNVSIVPSHFLQTDVSDIKGETS----IFSDMVFYFVN---VPPAYSLDSLHKMVVENG 349
K P D S G T +F M F+ + P S L +++ NG
Sbjct: 687 AKRAVKKPLTIAGYDESKRAGFTGPSGHVFEGMNFFVITDSVEPEKKSKLELEQLIKANG 746
Query: 350 GTFSMNLNNSVTHCVAADNKGLKYEAAKR--RGDVIHYSWVLDCCSQKK--------LLQ 399
G + A+ + +K + ++ + +I SW+ DC Q + L+
Sbjct: 747 GKIYQTHTAAPNTLCIAERRTVKVASVQKVAKESIIRPSWLFDCIKQNEVDKGLPDLLIP 806
Query: 400 LQPKYYLHLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNVDRSEDPKTIDYYKKKY 459
+P++ S ++++ VDE+SD Y D+ ++ +LL ++ + K +
Sbjct: 807 FEPRHMYFTVKSQEEEIARHVDEYSDSYARDITPNELSKLLVSMPLIPNLPPPHISKTET 866
Query: 460 CPQDKWSCFHGCCIYFY-----HSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNLAN 514
Q++ S F + + H + S + +L L LR F G V N L +
Sbjct: 867 QIQERESTFQELRGWLFKNQVLHFVKRRS---DSMLSLPLRLASNLARFAGASVANELED 923
Query: 515 --ATHVVVLSVLGYDVNFNSLTESFTAREKHLLWNKKL-HVVRSQWLEDCLAKEQKSEEY 571
THVV+ + D ++ +A K + +++ H+V W++D E +E
Sbjct: 924 KSITHVVIDT----DSQPADVSALRSAISKRVAAGRRIPHLVTIAWIQDSWKAESLLDEE 979
Query: 572 EYS 574
++
Sbjct: 980 RFA 982
>gi|115387487|ref|XP_001211249.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114195333|gb|EAU37033.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 864
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 150/537 (27%), Positives = 254/537 (47%), Gaps = 68/537 (12%)
Query: 69 EVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIGGYYG 127
E+E + + EG+VLK+ S + +R W+K+KPEY+ G LDV++IGGY+G
Sbjct: 339 EIEAALRSVVAEASEGLVLKNPRSPYRLNERHDDWMKVKPEYMTEFGESLDVVVIGGYFG 398
Query: 128 SGRRGGEVAQFLVAL---AERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKY 184
SG RGG ++ FL L + + SFC+VG G + + + ++++
Sbjct: 399 SGHRGGRLSSFLCGLRADGGHSSQGATSTKCYSFCKVGGGFNAADYANIRHHTDGKWKEW 458
Query: 185 EYPKRAPPSFYQVTNN--SKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
PK+ P + ++ ERPD+WI+ PE S++L + + ++ S+ F +LRFPR
Sbjct: 459 N-PKKPPTEYIELAGGDAQHERPDMWIK-PEDSVVLCVKAASVSV-SDQFRIGLTLRFPR 515
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSI 302
R+R DK W L VQ F++L S+ QK KE+ +SRK K +
Sbjct: 516 FKRLRMDKDWKSALSVQEFLDL-KSNVEQEQKEKEF---------SVDNSRKKRVKRTTK 565
Query: 303 VPSHFLQTDVSDIKGETS-----IFSDMVFYFV---NVPPAYSLDSLHKMVVENGGTFSM 354
P D SD + E + IF + F+ + N+P S L ++V NGG F
Sbjct: 566 KPLAIAGYD-SDAEIEYAGPSGHIFDGLNFFVLTDSNMPVKKSKAELEQLVKANGGKF-Y 623
Query: 355 NLNNSVTHCV-AADNKGLKYEAAKRRGDV--IHYSWVLDCCSQKK--------LLQLQPK 403
NN+ H + AD + +K + ++ G+V + SW+LDC Q + LL +P+
Sbjct: 624 QTNNAAPHTICVADRRTVKAASLQKSGNVAIVRPSWILDCVRQNEIDAGLPDLLLPFEPR 683
Query: 404 YYLHLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSN------VDRSEDPKTIDYYKK 457
+ + ++++ +D ++D + D ++ ++L N +D S++ ID K
Sbjct: 684 HMFFTTKDKEEEIMASLDPYNDSFARDTTNEELVEILKNMRKDHDLDASQNTDAIDKLIK 743
Query: 458 KYCPQDKWS---------CFHGCCIYFYHSTEPLSPDWEVLLGLALRRLKLE---ISFHG 505
+ Q+K S F G I+F + D E + RL L I F G
Sbjct: 744 RI--QEKASSGAEAPLGWLFKGLTIFFPQLKKD-EIDGETPASTQIYRLSLAANTIRFAG 800
Query: 506 GKVCNNLANA--THVVVLSVLGYDVNFNSLTESFTAREKHLLWNKKLHVVRSQWLED 560
G V +++ + TH+VV+ +S+ +S +A+ K H+V +W+E+
Sbjct: 801 GCVVDSMKHPSLTHIVVVPDS-SSSEVSSIRKSLSAKAG----GKLPHLVTVEWIEE 852
>gi|242763727|ref|XP_002340632.1| DNA ligase, putative [Talaromyces stipitatus ATCC 10500]
gi|218723828|gb|EED23245.1| DNA ligase, putative [Talaromyces stipitatus ATCC 10500]
Length = 1014
Score = 159 bits (402), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 131/487 (26%), Positives = 232/487 (47%), Gaps = 55/487 (11%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLII 122
A E+E ++ +E EG+VLK+ S + +R W+K+KPEY+ G LD++II
Sbjct: 466 ATTAAEIEPILRKVVEEASEGLVLKNPRSPYRLNERHDDWMKVKPEYMTEFGEALDLVII 525
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVV----TKLK 178
GGYYGSG+RGG ++ +L L + + SFC+VG G + + + K K
Sbjct: 526 GGYYGSGKRGGALSSYLCGLRVDDPNGSNSMKCYSFCKVGGGFTAADYANIRHHTDGKWK 585
Query: 179 PYFRKYEYPKRAPPSFYQVTN---NSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP 235
P+ PK+ P F ++ + KE+PD WI P++S+++ + + ++ SE F
Sbjct: 586 PW-----NPKKPPTEFIELAGGEASQKEKPDEWIR-PDESVVICVKAASVSV-SEEFRIG 638
Query: 236 YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKG 295
+LRFPR ++R DK W L VQ F++L S+ QK K++ + + + K+ ++S
Sbjct: 639 LTLRFPRFKKLRMDKDWKSALSVQEFLDL-KSNVEKEQKEKQF-TVDNSRRKRIKTS--- 693
Query: 296 EKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFV---NVPPAYSLDSLHKMVVENGG-T 351
KK ++I V +IF + F+ + P + L ++V NGG
Sbjct: 694 TKKPLTIAGYDEKDKRVEYAGPTGNIFDGLDFFIMTDTTAPKKQTKVQLEQLVKSNGGKI 753
Query: 352 FSMNLNNSVTHCVAADNKGLKYEAAKRRGD--VIHYSWVLDCCSQKK---------LLQL 400
+ N T C+ AD + +K + ++ +I W+ DC Q + LL L
Sbjct: 754 YQTNTATPDTLCI-ADRRTVKVASLQKSAKDIIIRPIWLFDCIKQNEVDSRHLSSFLLPL 812
Query: 401 QPKYYLHLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSN--------VDRSEDPKTI 452
+P++ ++ ++++ + VD ++D Y D+ +++ +L VD + K I
Sbjct: 813 EPRHMFFTTEERQEEIADNVDVYNDSYARDVTPEELRTILDAAKPSQQELVDHDAEIKEI 872
Query: 453 D------YYKKKYCPQDKWSCFHGCCIYFYHSTEPLSPDWEVLLGLALRRLKLEISFHGG 506
+++ P W F G IYF+ S+E S + + + R+L F G
Sbjct: 873 SDLVFERGHEEGITPP-GW-LFRGLAIYFHASSESSSENTDQIRHFLARKL---TEFGGA 927
Query: 507 KVCNNLA 513
+ ++L
Sbjct: 928 DIVDDLG 934
>gi|296420167|ref|XP_002839652.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295635835|emb|CAZ83843.1| unnamed protein product [Tuber melanosporum]
Length = 991
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 110/416 (26%), Positives = 189/416 (45%), Gaps = 55/416 (13%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLII 122
A E+E+ ++ I EG+V+K+ S + DR+ W+K+KPEY+ G LD++++
Sbjct: 461 AREAVEIERALRKVIAEASEGLVIKNPRSIYRLNDRNDDWMKVKPEYMTEFGESLDLVVL 520
Query: 123 GGYYGSGRRGGEVAQFLVAL---AERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 179
GGY+GSG RGG ++ +L L P P +F SFC+VG G + + +
Sbjct: 521 GGYWGSGTRGGILSSYLCGLRVDGNHLKPGEDPMKFRSFCKVGGGFTANDYSKIAHMTDS 580
Query: 180 YFRKYEYPKRAPPSFYQVTNNSK--ERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYS 237
+ ++ PK+ P ++ + ++PDVWI P+KSI+L + + + ++ F S
Sbjct: 581 QWVPWD-PKKPPSEHIEIVAGGRGVDQPDVWIR-PDKSIVLEVKA-ASIVPTDEFRVGKS 637
Query: 238 LRFPRIDRVRYDKPWHDCLDVQSFVEL--------------VHSSNGTTQKGKEYGGLQD 283
LRFPR ++R DK W L + + L + N T + GK
Sbjct: 638 LRFPRFRQIREDKDWQTALSISELIALKEEVEKEKADEEKRIEVENRTRRAGK------- 690
Query: 284 DKPKQFRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFVN---VPPAYSLDS 340
R R+ S P+ F+ V +G +F FY ++ P
Sbjct: 691 ------RMKREYTVLGASDKPADFVSPTV---EGGPRLFEGRSFYVMSDATTPKKMGKAE 741
Query: 341 LHKMVVENGGTFSMNLNNSVTHCVAADNKGLKYEAAKRRG--DVIHYSWVLDCCSQKKL- 397
+ +++ +GG N V D +K A K++G DVI +W+ DC Q +L
Sbjct: 742 VEQLIKSHGGNLYQTENAVPDTNVIGDKNNVKISALKKKGTHDVIRPAWIFDCIRQHELD 801
Query: 398 ----------LQLQPKYYLHLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNV 443
+ ++ ++ LH + +++ VD+F D Y DL + +I LL ++
Sbjct: 802 LQRGQKGCYIIPIEARHILHAASGVERRAAASVDQFGDSYARDLTMEEISNLLRDM 857
>gi|440466097|gb|ELQ35383.1| DNA ligase 4 [Magnaporthe oryzae Y34]
gi|440482713|gb|ELQ63180.1| DNA ligase 4 [Magnaporthe oryzae P131]
Length = 1135
Score = 156 bits (394), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 154/555 (27%), Positives = 254/555 (45%), Gaps = 55/555 (9%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLII 122
A + D VE ++ + + EG+VLK+ S + R+ W+K+KPEY+ G LD ++I
Sbjct: 474 ATSADAVEPLLRKVVADSSEGLVLKNPRSVYRLNSRNNDWIKVKPEYMSEFGESLDCVVI 533
Query: 123 GGYYGSGRRGGEVAQFLVAL---AERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 179
GGYYGSG RGG ++ FL L P + ISF +VG G E+ + +
Sbjct: 534 GGYYGSGHRGGTISSFLCGLRVGENHIKAGANPEKCISFFKVGGGFKAEDYAQIRHLTEG 593
Query: 180 YFRKYEYPKRAPPSFYQVTNNSK---ERPDVWIESPEKSIILSITSDIRTIRSEVFSAPY 236
+ ++ PK+ P F ++ K ERPDVWI P+ SI++S+ + S F+
Sbjct: 594 KWMDWD-PKKPPSEFIELGGGEKYQYERPDVWIR-PKDSIVVSVKA-ASIGASPQFAMQI 650
Query: 237 SLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGE 296
+LRFPR R+R D+ W LDV F++L + ++ KE ++D K R +K
Sbjct: 651 TLRFPRFRRLRTDRTWDSALDVDDFMKLKEDAEQQVKEKKEM-KIEDRK----RRPQKRA 705
Query: 297 KKNVSIVPSHFLQTDVSDIK--------GET-SIFSDMVFYFVN--VPPAYSLDS-LHKM 344
++ + ++ T ++D K G T S+F F + V P + L +
Sbjct: 706 RREI-LIAGQDPDTAMADQKPAAGQAQTGRTRSVFEGRKFCVMTDCVKPIRKTKAQLESL 764
Query: 345 VVENGGTFSMNLNNSVTHCVAADNKGLKYEAAKRRG---DVIHYSWVLDCCSQKK---LL 398
+ +GGT S + + AD G+K + +R D+I +WVLDC Q LL
Sbjct: 765 IKAHGGTLSQQTDPQPWKYLIADKYGIKVASLLKRDSEVDIIRPNWVLDCLDQDGVEFLL 824
Query: 399 QLQPKYYLHLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNVDRSEDPKT------I 452
+ K+ L+ S+++K+ + +VDE+ D Y +D+ ++KQ+ + + ED + +
Sbjct: 825 PFEEKHLLNASEATKQTAEFQVDEYGDSYMRAVDVDELKQIAEGIPKFEDADSFDVDEFL 884
Query: 453 DYYKKKYCPQDKWSCFHGCCIYFYHSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNL 512
D + C CI + L L+ I F GG V +NL
Sbjct: 885 DSLESAGCEMTGLGFVFRRCIVLVAGVAGTPKHY-------LDILRSYIRFGGGTVVDNL 937
Query: 513 ANA--THVVVLSVLGYDVNFNSLTESFTAREKHL--LWNKKLHVVRSQWLEDCLAKEQKS 568
+ THVVV D N + A +H L + +V QW+++ ++
Sbjct: 938 QSQGLTHVVVAG----DSNEGAAARELAAELRHRISLLRRPPRLVTRQWVDESWKEKTLL 993
Query: 569 EEYEYSLKPTGMQES 583
+E Y + Q+S
Sbjct: 994 DEEAYHVASLSTQKS 1008
>gi|325181477|emb|CCA15911.1| DNA ligase putative [Albugo laibachii Nc14]
Length = 1435
Score = 155 bits (393), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 136/522 (26%), Positives = 240/522 (45%), Gaps = 101/522 (19%)
Query: 78 IENRDEGIVLKDLGSKWEPGDRSG---KWLKLKPEYIRAGSDLDVLIIGGYYGSG-RRGG 133
I N EG++LKDL S + G+ S +W+KLKP Y ++LDVLI+GGYYG+G RR G
Sbjct: 846 ITNGGEGLILKDLNSHYMCGEASRATRRWIKLKPNYAEITTNLDVLILGGYYGTGRRRSG 905
Query: 134 EVAQFLVALAERPAPDTYPRR---------FISFCRVGTGLSDEELDAVVTKLKPYFRKY 184
+V+ FLV + +P + + F +F ++GTG + EEL + +L+PY++ +
Sbjct: 906 DVSVFLVGVLPQPLNEDMILKASTLDELPPFYTFAKIGTGYNLEELAQMRRELEPYWQPW 965
Query: 185 EYPKRAPPSF--YQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
+ PP F +Q S RPDVWI+ P +S +L + S + +LRFPR
Sbjct: 966 D-SNNIPPHFSGWQAM-RSDLRPDVWID-PRRSKVLEVYG-FELTYSTFYKTRLTLRFPR 1021
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSI 302
+R DK W++C +Q + + S+ G Q K R+++ I
Sbjct: 1022 CHAIRNDKSWYECSTLQD-LSIAQGSSPKRSAADVTIGHQAKK----RATQPRRPLQDKI 1076
Query: 303 VPSHFLQTDVSDIKGETSIFSDMVFY-------------------------------FVN 331
V + Q + ++ + IF D F F N
Sbjct: 1077 VAPEYTQAKLENVPKKFDIFRDNEFCVLPGRYSSQDSGLTRDAIAAVLSPMRKDETKFTN 1136
Query: 332 ---VPPAYSLDSLHKMVVENGGTFSMN-LNNSVTHCVAADNKGLKYEAAKRRG--DVIHY 385
V P + + +++ GG N + +S T VA+ KGLK+E KR+G +V+++
Sbjct: 1137 EAQVFPELTKQQVEQVIHCFGGRLVQNPVEDSTTFVVASSAKGLKFENLKRQGHFNVLNF 1196
Query: 386 SWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNVDR 445
++L C + ++ + + +L ++S++ L E D++ D Y + + +++QL+ +++
Sbjct: 1197 RYILKCVADGTMMPIGARDFLFATESTQAALAESYDQYGDHYTTPISVDELRQLIKDMEL 1256
Query: 446 S--------------------EDPKTIDYYKKKYCPQDKWSCFHGCCIY------FYHST 479
S E+ + +DY ++S C +Y +T
Sbjct: 1257 SQKVSDEFACWQRRMKAELSAEEQEVMDY---------EYSILCHCVVYVDQFDSIGDTT 1307
Query: 480 EPLSPDWEVLLGLALRRLKLEISFHGGKVCNNL-ANATHVVV 520
D +LGLA ++L+L +G V ++ ++ TH+V+
Sbjct: 1308 ASSQMDECGVLGLAAQQLQL----YGALVTTSIDSSVTHIVI 1345
>gi|402086148|gb|EJT81046.1| DNA ligase 4 [Gaeumannomyces graminis var. tritici R3-111a-1]
Length = 1015
Score = 155 bits (393), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 136/496 (27%), Positives = 231/496 (46%), Gaps = 53/496 (10%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLII 122
A + D +E ++ I + EG+VLK+ S + R+ WLK+KPEY+ G LD L++
Sbjct: 482 ATSHDAIEPLLRQVIADASEGLVLKNPRSMYRLNSRNDDWLKVKPEYMDEYGESLDCLVV 541
Query: 123 GGYYGSGRRGGEVAQFLVAL---AERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 179
GGY+GSGRRGG V+ FL L P + ISFC+VG G E+ + +
Sbjct: 542 GGYFGSGRRGGTVSSFLCGLRVGENHVKAGIDPEKCISFCKVGGGFKAEDYAHIRHLTEG 601
Query: 180 YFRKYEYPKRAPPSFY-QVTNNSK---ERPDVWIESPEKSIILSITSDIRTIRSEVFSAP 235
+ ++ PPS Y ++ K ERPDVWI P+ S+++S+ + S+ F
Sbjct: 602 KWMGWDASN--PPSKYIELGGGDKFQYERPDVWIR-PKDSVVISVKA-ASVASSDQFGMK 657
Query: 236 YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQ-DDKPKQFRSSRK 294
+LRFPR +R D+ W+ LDV F+ L QK KE ++ +D+ + R +
Sbjct: 658 MTLRFPRFRGLRSDRSWNSALDVDGFLRLREE---IEQKAKEKTEMKIEDRRRPARKRAR 714
Query: 295 GEKKNVSIVPSHFLQTDVSDIKG-------ETSIFSDMVFYFVN---VPPAYSLDSLHKM 344
E S + + + G + +F + F ++ P + L +
Sbjct: 715 RELVIAGQDTSAAMPAGANQLGGFANAAAKKGRLFKGLTFCVLSESLRPVRQTKAQLEML 774
Query: 345 VVENGGTFSMNLN-NSVTHCVAADNKGLKYEA-AKRRGD--VIHYSWVLDCCSQKK---L 397
+ +GG+ S + S T + AD +K + K+ GD VI W++DC Q +
Sbjct: 775 IKSHGGSISQKADPKSKTMRLIADKNVVKVASLIKQDGDVNVIRPGWIMDCVKQGGGGFV 834
Query: 398 LQLQPKYYLHLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNVDRSEDP-------- 449
L L+ ++ LH +S+++ +E +D F D Y DL+ +I LL + + +D
Sbjct: 835 LPLEERHLLHAPESTRRLAEEAIDAFGDSYMRDLEAEEIDGLLQGMGQQDDDEGADNDDM 894
Query: 450 -KTIDYYKKKYCPQDKWSCFHGCCIYFYHSTEPLSPDWEVLLGLALRRLKLEISFHGGKV 508
+ ++ + P + F C ++ S +P AL +L+ + F GG +
Sbjct: 895 QRILELLGETGEPA-RGLMFQRCLVHCARSAG--TP------AFALEQLQNYVLFGGGAI 945
Query: 509 CNNL--ANATHVVVLS 522
++ TH+VV++
Sbjct: 946 ADSADRTGITHIVVVT 961
>gi|340504113|gb|EGR30594.1| hypothetical protein IMG5_128250 [Ichthyophthirius multifiliis]
Length = 813
Score = 155 bits (392), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 104/396 (26%), Positives = 200/396 (50%), Gaps = 36/396 (9%)
Query: 74 FKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGS---- 128
F E + N +EGI++K L S++ P +RS KW+K+K +Y +D LD++++G + G+
Sbjct: 417 FNEAMNNNEEGIIIKQLDSQYVPDERSNKWIKMKGDYYEGITDTLDLIVLGAFLGNKSYK 476
Query: 129 ----GRRGGEVAQFLVALA---ERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYF 181
G + FL+ ++ ++ P F+ FC+VGTG +DE L + KL+ +
Sbjct: 477 TSGIGDWTDCLTHFLLGISSYIDKNVPTN--SVFLPFCKVGTGYTDEILRTIKIKLRDQW 534
Query: 182 RKYEYPKRAPPSFYQVTNNSK-ERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRF 240
+ PSF Q K ++P+ +I SP+ S+I + + I S F Y+LRF
Sbjct: 535 VR----TSNLPSFVQNCKLQKSDKPEAFINSPDNSLIFEVRAS-EIINSHNFPTHYTLRF 589
Query: 241 PRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKG--------KEYGGLQDDK----PKQ 288
PR +++R DK W++C+ ++ ++ +N + ++G KE G +++ PK+
Sbjct: 590 PRFEKLRTDKDWYECMTLEDLQQM--KNNLSKKQGESDAEKSQKEDGEDNNEQGTRSPKK 647
Query: 289 FRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVEN 348
+ ++ ++ + + + Q DVS + + +F VF +N +L ++ N
Sbjct: 648 RKQIKRNHQEYANQIMQQYQQIDVSQVNLVSQLFIGFVFNIINCEEGEK-QNLQFSIISN 706
Query: 349 GGTFSMNLNNSVTHCVA-ADNKGLKYEAAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLH 407
G N + VTH +A + ++ + +V+ WV DC +K++L PKY
Sbjct: 707 NGQVFQNDSGKVTHYLAYMHDFRVQAIINNYKVNVLKPKWVFDCIKRKEILDYAPKYITF 766
Query: 408 LSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNV 443
+ K++ D++ D YF ++D+ +++ +L N+
Sbjct: 767 AQEELKQRNIALYDKYGDPYFKEIDVEELRDILENM 802
>gi|189207961|ref|XP_001940314.1| DNA ligase 4 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187976407|gb|EDU43033.1| DNA ligase 4 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 988
Score = 155 bits (392), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 132/486 (27%), Positives = 232/486 (47%), Gaps = 46/486 (9%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLII 122
A + E+E ++ I EG+VLK+ S + R+ W+K+KPEY+ G LD +++
Sbjct: 476 ARSHTEIEPALRKVIAESSEGLVLKNPRSMYCLSQRNNDWMKVKPEYMSEFGESLDCVVV 535
Query: 123 GGYYGSGRRGGEVAQFLVALA----ERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLK 178
GGY+GSG RGG + FL AL +P Y + SF +VG G S E+ A+ + +
Sbjct: 536 GGYFGSGHRGGVHSSFLCALLTDKDAKPGDPKYEHCW-SFFKVGGGFSREDYAAIRGRTE 594
Query: 179 PYFRKYEYPKRAPPSFYQV----TNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA 234
+ ++ +R PP F ++ N ERPD WI E ++ + + + S+ F +
Sbjct: 595 GKWHNWD--RRRPPLFIELGGHEQNRQHERPDQWIRPSESVVLECKAASVES--SDKFRS 650
Query: 235 PYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRK 294
+LRFPR +R DK W L VQ F+++ + + ++ ++ + K+ R++
Sbjct: 651 TLTLRFPRFKLLRVDKRWDQALSVQEFLDVKSRAEKEKSEKEKEFKIEQSRRKKARTA-- 708
Query: 295 GEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFVN---VPPAYSLDSLHKMVVENGGT 351
KK +++V ++T + + +F + FY + P S L +V NGG
Sbjct: 709 --KKPLTVVSDDAIKTPYAG--PASKVFEGLAFYIMTEQVYPTKKSKADLEALVKANGGR 764
Query: 352 FSMNLNNSVTHCVAADNKGLKYEAAKRRG--DVIHYSWVLDCCSQKK--------LLQLQ 401
+ + + AD + +K + ++RG +V+ +W+ DC Q + LL +
Sbjct: 765 LVQRDSTAKDLVIVADKRLIKVASLEKRGTNNVVKPAWLQDCIMQNERDAGAPPYLLPFE 824
Query: 402 PK---YYLHLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNVDRSEDPKTIDYYKKK 458
P YYLH D + + +D+ D Y D+AD++++ S +D E PKT + +
Sbjct: 825 PNRHMYYLH--DDDQMDYEANLDDNGDSY--ARDIADMEEMRSLLDGMETPKTT-FSRDG 879
Query: 459 YCPQDKWSC--FHGCCIYFYHSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNL--AN 514
+ Q + F Y + + + + EV L L + K + F GG++ + +
Sbjct: 880 FLEQLEGHGEDFSQFKTYMFRNVK-VKFSAEVGLELRAKLAKNYVRFGGGQIVGDGDEED 938
Query: 515 ATHVVV 520
THVVV
Sbjct: 939 VTHVVV 944
>gi|67515631|ref|XP_657701.1| hypothetical protein AN0097.2 [Aspergillus nidulans FGSC A4]
gi|74599223|sp|Q5BH83.1|DNLI4_EMENI RecName: Full=DNA ligase 4; AltName: Full=DNA ligase IV; AltName:
Full=Polydeoxyribonucleotide synthase [ATP] 4
gi|40746119|gb|EAA65275.1| hypothetical protein AN0097.2 [Aspergillus nidulans FGSC A4]
gi|259489711|tpe|CBF90206.1| TPA: DNA ligase 4 (EC 6.5.1.1)(DNA ligase
IV)(Polydeoxyribonucleotide synthase [ATP] 4)
[Source:UniProtKB/Swiss-Prot;Acc:Q5BH83] [Aspergillus
nidulans FGSC A4]
Length = 1009
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 147/536 (27%), Positives = 253/536 (47%), Gaps = 69/536 (12%)
Query: 69 EVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIGGYYG 127
EVE ++ + EG+VLK+ S + +R W+K+KPEY+ G LD+++IGGYYG
Sbjct: 470 EVEASLRKAVAEASEGLVLKNPRSPYRLNERHDDWMKVKPEYMTEFGESLDLVVIGGYYG 529
Query: 128 SGRRGGEVAQFLVAL---AERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKY 184
SG RGG+++ FL L + + + P + SFC+VG G + + + + ++
Sbjct: 530 SGHRGGKLSSFLCGLRVDEGQSSQGSNPTKCYSFCKVGGGFTAADYANIRHHTDGKWVEW 589
Query: 185 EYPKRAPPSFYQVT--NNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
PK+ P ++ ++ ++ ERPD+WI+ PE S+++ + + ++ S+ F +LRFPR
Sbjct: 590 N-PKKPPTTYIELAGGDSQYERPDMWIK-PEDSVVICVKAASVSV-SDQFRIGLTLRFPR 646
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSI 302
R+R DK W L VQ F++L S + KE+ + FR R + +
Sbjct: 647 FKRLRMDKDWKSALSVQEFLDL-KSHAEQEHREKEF------NVENFRKKRVKKTTKKPL 699
Query: 303 VPSHFLQTDVSDIKGETS-IFSDMVFYFV---NVPPAYSLDSLHKMVVENGG-TFSMNLN 357
+ + + G + IF + F+ + N P S L +V NGG F N
Sbjct: 700 AIAGYDENAEVQYAGPSGHIFDGLNFFILTDSNAPVKKSKAELENLVKANGGRIFQTNDA 759
Query: 358 NSVTHCVAADNKGLKYEAAKRRG--DVIHYSWVLDCCSQKKL--------LQLQPKYYLH 407
T C+ AD + +K + +++G D+I SW+LDC Q ++ L L+P +
Sbjct: 760 VPDTICI-ADRRTVKAASLQKKGDIDIIRPSWILDCIKQSEIDAGLPDLLLPLEPGHMFF 818
Query: 408 LSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNVDRSEDPKTIDYYKKKYCP------ 461
++ ++ + +D+F+D Y D+ + +++ LL + ++D KT + +
Sbjct: 819 MTKDKEEIVAGSLDQFNDSYARDITVEELRNLLDQM--AKDGKTDSFCSPEAIQKVTEHI 876
Query: 462 QDK----WS-----CFHGCCIYFYH-----STEPLSPDWEVLLGLALRRLKLEISFHGGK 507
Q+K W+ F G + F ++E P + LA K F G
Sbjct: 877 QEKVDSGWTMPCGWLFKGLVLCFPENENDSASEGPEPKQSQRIHLAQNTAK----FAGAS 932
Query: 508 VCNNLANA--THVVVLSVLGYDVNFNSLTESFTAREKHLLWNKKL-HVVRSQWLED 560
V +L + THVVV D +F S + L +KL H+V+ W+ED
Sbjct: 933 VTTSLKDTSITHVVV------DPDFTS--SELPKLRRTLSTRRKLPHIVKVNWIED 980
>gi|389630310|ref|XP_003712808.1| DNA ligase 4 [Magnaporthe oryzae 70-15]
gi|215848864|dbj|BAH01725.1| putative DNA ligase 4 [Magnaporthe grisea]
gi|351645140|gb|EHA53001.1| DNA ligase 4 [Magnaporthe oryzae 70-15]
Length = 1001
Score = 154 bits (388), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 142/490 (28%), Positives = 230/490 (46%), Gaps = 49/490 (10%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLII 122
A + D VE ++ + + EG+VLK+ S + R+ W+K+KPEY+ G LD ++I
Sbjct: 474 ATSADAVEPLLRKVVADSSEGLVLKNPRSVYRLNSRNNDWIKVKPEYMSEFGESLDCVVI 533
Query: 123 GGYYGSGRRGGEVAQFLVAL---AERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 179
GGYYGSG RGG ++ FL L P + ISF +VG G E+ + +
Sbjct: 534 GGYYGSGHRGGTISSFLCGLRVGENHIKAGANPEKCISFFKVGGGFKAEDYAQIRHLTEG 593
Query: 180 YFRKYEYPKRAPPSFYQVTNNSK---ERPDVWIESPEKSIILSITSDIRTIRSEVFSAPY 236
+ ++ PK+ P F ++ K ERPDVWI P+ SI++S+ + S F+
Sbjct: 594 KWMDWD-PKKPPSEFIELGGGEKYQYERPDVWIR-PKDSIVVSVKA-ASIGASPQFAMQI 650
Query: 237 SLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGE 296
+LRFPR R+R D+ W LDV F++L + ++ KE ++D K R +K
Sbjct: 651 TLRFPRFRRLRTDRTWDSALDVDDFMKLKEDAEQQVKEKKEM-KIEDRK----RRPQKRA 705
Query: 297 KKNVSIVPSHFLQTDVSDIK--------GET-SIFSDMVFYFVN--VPPAYSLDS-LHKM 344
++ + ++ T ++D K G T S+F F + V P + L +
Sbjct: 706 RREI-LIAGQDPDTAMADQKPAAGQAQTGRTRSVFEGRKFCVMTDCVKPIRKTKAQLESL 764
Query: 345 VVENGGTFSMNLNNSVTHCVAADNKGLKYEAAKRRG---DVIHYSWVLDCCSQKK---LL 398
+ +GGT S + + AD G+K + +R D+I +WVLDC Q LL
Sbjct: 765 IKAHGGTLSQQTDPQPWKYLIADKYGIKVASLLKRDSEVDIIRPNWVLDCLDQDGVEFLL 824
Query: 399 QLQPKYYLHLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNVDRSEDPKT------I 452
+ K+ L+ S+++K+ + +VDE+ D Y +D+ ++KQ+ + + ED + +
Sbjct: 825 PFEEKHLLNASEATKQTAEFQVDEYGDSYMRAVDVDELKQIAEGIPKFEDADSFDVDEFL 884
Query: 453 DYYKKKYCPQDKWSCFHGCCIYFYHSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNL 512
D + C CI + L L+ I F GG V +NL
Sbjct: 885 DSLESAGCEMTGLGFVFRRCIVLVAGVAGTPKHY-------LDILRSYIRFGGGTVVDNL 937
Query: 513 ANA--THVVV 520
+ THVVV
Sbjct: 938 QSQGLTHVVV 947
>gi|408400641|gb|EKJ79719.1| hypothetical protein FPSE_00173 [Fusarium pseudograminearum CS3096]
Length = 984
Score = 154 bits (388), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 140/486 (28%), Positives = 227/486 (46%), Gaps = 53/486 (10%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLII 122
A + D +E +E + N EG+VLK+ S + R+ WLK+KPEY+ G LD +II
Sbjct: 471 ATSADAIEPLLREVVANASEGLVLKNPRSMYRLNSRNDDWLKVKPEYMSEFGESLDCVII 530
Query: 123 GGYYGSGRRGGEVAQFLVAL---AERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 179
GYYG+G+RGG ++ FL L P + SF +VG G E D + +
Sbjct: 531 AGYYGTGKRGGALSSFLCGLRVTQNHIQAGANPEKCFSFFKVGGGFRAE--DYAEIRHRT 588
Query: 180 YFRKYEYPKRAPPSFYQVTNNSK----ERPDVWIESPEKSIILSITSDIRTIRSEVFSAP 235
+ E+ +R PPS Y + ERPDVWI K ++ S+ F+
Sbjct: 589 EGKWIEWDQRNPPSEYIELGGGEARQFERPDVWIRP--KDSVVVSVKAASVGPSDSFALG 646
Query: 236 YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKG 295
++LRFPR R+R D+ W+ L ++ F EL + ++ KE +D+ R + K
Sbjct: 647 FTLRFPRFRRLRLDRSWNTALSLEEFQELKQRVD---EESKEKAMTVEDRK---RHNPKR 700
Query: 296 EKKNVSIVPSHFLQTDVSDIKGETS-IFSDMVFYFVN---VPPAYSLDSLHKMVVENGGT 351
K+ ++I T+V++ GET+ +F + F ++ P + L ++ ENGG
Sbjct: 701 VKRELTIAGE---DTNVAEFIGETTKLFEGLEFCVLSEALRPYKKTKTQLETIIKENGGV 757
Query: 352 FSMNLNNSVTHCVAADNKGLKYEAAKRRGDV--IHYSWVLDCCSQKK---LLQLQPKYYL 406
S + AD K +K + + GDV I W+ DC Q+ LL + +
Sbjct: 758 ISQRAAPGTNMVLIADKKVVKVASLVKGGDVNIIRPKWIRDCLEQELGAFLLPFEDTHLF 817
Query: 407 HLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNVDRSEDPKTIDYYKKKYCPQ---- 462
H +D+ K+ E D+F D Y DL + +++Q+++++ + ED I + K ++ Q
Sbjct: 818 HATDALKRAANENTDQFGDSYIRDLSIEELRQVMNDMPKIED--GIAFDKNEFLQQLEER 875
Query: 463 ------DKWSCFHGCCIYFYHSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCN--NLAN 514
K F C + F H+ E + RL+ + F GG V + N +
Sbjct: 876 GKDLGPLKSLTFRRCVVLF-HAVEAGDK--------RMSRLENLVRFGGGSVTDDANDLS 926
Query: 515 ATHVVV 520
THVV+
Sbjct: 927 VTHVVI 932
>gi|109121303|ref|XP_001084107.1| PREDICTED: DNA ligase 4-like [Macaca mulatta]
Length = 642
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 86/226 (38%), Positives = 133/226 (58%), Gaps = 9/226 (3%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLII 122
AH +EV E I+ R+EGI++K S ++P R WLK+KPEY+ D LD+LI+
Sbjct: 408 AHTKNEVIDALNEAIDKREEGIMIKQPLSIYKPDKRGEGWLKIKPEYVTGLMDELDILIV 467
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
GGY+G G RGG ++ FL A+AE+P P P F + RVG+G + +EL + KL Y++
Sbjct: 468 GGYWGKGSRGGMMSHFLCAVAEKPPPGEKPSVFHTLSRVGSGCTMKELYDLGLKLAKYWK 527
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
+ K+APPS E+P+V+IE P S+I+ I + + S+++ +LRFPR
Sbjct: 528 PFH--KKAPPSSILC---GTEKPEVYIE-PCNSVIVQIKA-AEIVPSDMYKTGCTLRFPR 580
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQ 288
I+++R DK WH+C+ + +L ++G Y G DD P++
Sbjct: 581 IEKIREDKEWHECMTLDDLEQLRGKASGKLASKHLYVG-GDDGPQE 625
>gi|452846225|gb|EME48158.1| hypothetical protein DOTSEDRAFT_60502 [Dothistroma septosporum
NZE10]
Length = 963
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 122/483 (25%), Positives = 224/483 (46%), Gaps = 57/483 (11%)
Query: 69 EVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIGGYYG 127
E+E ++ I EG+VLK+ S++ +R+ W+K+KPEY+ G LD +++GGYYG
Sbjct: 460 EIEPILRQVIAEASEGLVLKNPRSQYRLNERNDDWIKVKPEYMTEFGESLDCVVVGGYYG 519
Query: 128 SGRRGGEVAQFLVALAERPA-----PDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
+G+RGG ++ F+ L D+ P++ SF +VG G S + + + +
Sbjct: 520 TGKRGGGLSSFMCGLKLSAQHFQVFSDSNPQKTYSFFKVGGGFSANDYAEIRHRTDGKWI 579
Query: 183 KYEYPKRAPPSFYQVTNNSK--ERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRF 240
K++ K+ P + ++ + E+PDVWI+ PE S+++S+ + + ++ F +LRF
Sbjct: 580 KWD-KKKPPTDWIELGGGDRQYEKPDVWIK-PEDSVVISVKA-AQVGGTDQFRVGLTLRF 636
Query: 241 PRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNV 300
PR ++R DK W L + F+ L + + + K + D+ ++ R++ G++K
Sbjct: 637 PRFKKLRTDKDWTQALGIDEFITLKNEAEEAMNEKK----FKVDEARKQRTN--GKRKRA 690
Query: 301 SIVPSHFLQTDVSDIKGETSIFSDMVFYFVNVPP---AYSLDSLHKMVVENGGTFSMNLN 357
++ T T +F + F+ ++ P S L ++ NGG
Sbjct: 691 LVIQGQDDNTTTPYAGPATKMFEGLSFFVMSEAPKPIKKSKMELEALIAANGGNVVAAET 750
Query: 358 NSVTHCVAADNKGLKYEAAKRRG--DVIHYSWVLDCCSQKK--------LLQLQPKYYLH 407
+ T + +D K +K + +R +++ SW+ DC Q + LL +P + LH
Sbjct: 751 DPRT-ILISDRKVIKVASIVKRDNRNIVRPSWLFDCVKQSEADFGRPRLLLPFEPHHLLH 809
Query: 408 LSDSSKKKLQEEVDEFSDLYFWDLD----LADIKQLLSNVDRSEDPKTI----DYYKKKY 459
+ + VDE+ D Y D+ L K++ S VD +P I + + +
Sbjct: 810 TVSAEEGDYDNNVDEYGDSYTRDVTPQELLELFKKMPSRVDNGFEPSEILQQLNDHGSEL 869
Query: 460 CPQDKWSCFHGCCIYFYHSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNLAN--ATH 517
P W + C F+ +AL ++L F GG V ++L + TH
Sbjct: 870 DPMPGWMFY--CITAFFED-------------VALETVRL-FEFAGGIVADSLEDDEVTH 913
Query: 518 VVV 520
V+
Sbjct: 914 AVI 916
>gi|396485689|ref|XP_003842232.1| similar to DNA ligase [Leptosphaeria maculans JN3]
gi|312218808|emb|CBX98753.1| similar to DNA ligase [Leptosphaeria maculans JN3]
Length = 989
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 138/534 (25%), Positives = 242/534 (45%), Gaps = 49/534 (9%)
Query: 69 EVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIGGYYG 127
E+E ++ + EG+VLK+ S + +R+ W+K+KPEY+ G LD +I+GGY+G
Sbjct: 473 EIEPALRKVVAESSEGLVLKNPRSMYRLNERNNDWMKVKPEYMSEFGESLDCVIVGGYFG 532
Query: 128 SGRRGGEVAQFLVAL---AERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKY 184
SG RGG + FL AL + D + SF +VG G S ++ A+ + + ++ +
Sbjct: 533 SGHRGGAHSSFLCALLIDKDAKHGDQDYEKCWSFFKVGGGFSRDDYAAIRGRTEGKWKDW 592
Query: 185 EYPKRAPPSFYQVT----NNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRF 240
+ R PP F ++ N ERPD WI + ++ S + S+ F +LRF
Sbjct: 593 DI--RRPPPFIELGGHLENRHHERPDQWINPSDSVVVECKASSVEA--SDKFRTGLTLRF 648
Query: 241 PRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNV 300
PR ++R DK W L +Q F +L H T + ++ ++ + K+ R+S KK +
Sbjct: 649 PRFRQLRSDKRWDQALSLQEFQDLKHDVERTLAEKEKEFKIEASRRKKARTS----KKPL 704
Query: 301 SIVPSHFLQTDVSDIKGETSIFSDMVFYFVN---VPPAYSLDSLHKMVVENGGTFSMNLN 357
++ + L+T + E+ +F + FY + P + L V NGGT
Sbjct: 705 TVAGNETLKTPYAG--PESKLFDGLSFYIMTEQLYPTKMAKAELESRVKANGGTIVQRDA 762
Query: 358 NSVTHCVAADNKGLKYEAAKRR--GDVIHYSWVLDCCSQKK---------LLQLQPKYYL 406
+ AD + +K A +R +++ W+ DC +Q + L Q ++
Sbjct: 763 MDNNLIIVADKRLIKVAALIKRDTNNIVKPVWIQDCIAQNEADAGALPYLLPYEQERHLF 822
Query: 407 HLSDSSKKKLQEEVDEFSDLYFWDL-DLADIKQLLSNVDRSEDPKTIDYYKKKYCPQ--D 463
++ D+++ VDE+ D Y D+ D+ +++ LL V + + T + ++++ Q D
Sbjct: 823 YVQDNNQLDFFTNVDEYGDSYARDIADVEEMRMLLDAVGQKKPLGTTTFNREEFLTQLED 882
Query: 464 KWSCFHGCCIYFYHSTEPLSPDWEVLLGLALRR--LKLEISFHGGKVC--NNLANATHVV 519
F G + + + L E + ALR + + F GG V + TH+V
Sbjct: 883 HGESFAGLKTHMFSHMKVLFHVDEQDVDGALRAQLARNYVRFGGGVVVEHGDENGITHIV 942
Query: 520 VLSVLGYDVNFNSLTESFTAREKHLLWNKKLHVVRSQWLEDCLAKEQKSEEYEY 573
V V FN + KH + N V W+E C + + +E +
Sbjct: 943 VEGE-QQAVQFN--------KRKHKISNMA-RTVGIAWIEKCWHEGTRLDEERF 986
>gi|451997909|gb|EMD90374.1| hypothetical protein COCHEDRAFT_1179075 [Cochliobolus
heterostrophus C5]
Length = 992
Score = 152 bits (385), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 128/490 (26%), Positives = 232/490 (47%), Gaps = 50/490 (10%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLII 122
A + E+E ++ + EG+VLK+ S + R+ W+K+KPEY+ G LD +++
Sbjct: 476 ARSHTEIEPALRKVVAEASEGLVLKNPRSMYCLNQRNNDWMKVKPEYMSEFGESLDCIVV 535
Query: 123 GGYYGSGRRGGEVAQFLVAL----AERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLK 178
GGY+GSGRRGG + FL AL + +P D SF +VG G S ++ A+ + +
Sbjct: 536 GGYFGSGRRGGAHSSFLCALLTNKSAKPG-DLKHEHCWSFFKVGGGFSSDDYAALRGRTQ 594
Query: 179 PYFRKYEYPKRAPPSFYQV----TNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA 234
+ +++ R PP F ++ N ERPD WI + ++ S + + S+ F
Sbjct: 595 GKW--HDWDPRRPPPFIELGGHEQNRQHERPDQWIRPSDSVVLECKASSVES--SDKFRF 650
Query: 235 PYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRK 294
+LRFPR ++R DK W L VQ F+E+ + ++ ++ + K+ R+S
Sbjct: 651 ALTLRFPRFKQLRTDKRWDQALSVQEFLEVKTKIETEKSEKEKEFKIEQSRRKKARTS-- 708
Query: 295 GEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFV---NVPPAYSLDSLHKMVVENGGT 351
KK ++++ + + T + E+ IF + FY + P S L ++ NGG
Sbjct: 709 --KKPLAVMGNDTVTTPYAG--PESKIFDGLSFYVMTEQTYPVKKSKADLEALIKANGGK 764
Query: 352 FSMNLNNSVTHCVAADNKGLKYEAAKRRG--DVIHYSWVLDCCSQKK--------LLQLQ 401
+ + + AD + +K + ++R +++ W+ DC +Q + LL +
Sbjct: 765 LVQRDSTNKNLIIIADKRLIKVASLEKRATNNIVKPVWIQDCITQNEADTGALPYLLPFE 824
Query: 402 P-KYYLHLSDSSKKKLQEEVDEFSDLYFWDL-DLADIKQLLSNVDRSEDPKTI---DYYK 456
P ++ +L D + + + VD D Y D+ D+ ++++LL + + E P T D+ K
Sbjct: 825 PNRHMFYLHDDDQFEFESNVDGNGDSYARDITDVEEMRKLLDGMAKPESPATFQQHDFLK 884
Query: 457 K-----KYCPQDKWSCFHGCCIYFYHSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNN 511
+ K Q K FH F + + + +W + LA L+ F G + ++
Sbjct: 885 QLEDHDKPLEQLKTHIFHSVKAVFSYGGD--NKEWSLRAQLAKNYLR----FGDGLIADD 938
Query: 512 L-ANATHVVV 520
TH++V
Sbjct: 939 EDEGVTHIIV 948
>gi|451847165|gb|EMD60473.1| hypothetical protein COCSADRAFT_243297 [Cochliobolus sativus
ND90Pr]
Length = 994
Score = 152 bits (384), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 140/531 (26%), Positives = 244/531 (45%), Gaps = 61/531 (11%)
Query: 34 CVCVHVYMLSQ---------LRSQIMAADQTGEPCWSLVAHNVDEVEKFFKETIENRDEG 84
CV ++ +L+Q L S + + E + A + E+E ++ + EG
Sbjct: 437 CVYLNDTLLTQYTLRDRRRALESAVKGVHRRLEVHPYIEARSHTEIEPALRKVVAEASEG 496
Query: 85 IVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIGGYYGSGRRGGEVAQFLVAL- 142
+VLK+ S + R+ W+K+KPEY+ G LD +++GGY+GSGRRGG + FL AL
Sbjct: 497 LVLKNPRSMYCLNQRNNDWMKVKPEYMSEFGESLDCIVVGGYFGSGRRGGAHSSFLCALL 556
Query: 143 ---AERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQV-- 197
+ +P D SF +VG G S ++ A+ + + + +++ R PP F ++
Sbjct: 557 TNKSAKPG-DPKHEHCWSFFKVGGGFSSDDYAALRGRTQGKW--HDWDPRRPPPFIELGG 613
Query: 198 --TNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDC 255
N ERPD WI P S++L + S+ F +LRFPR ++R DK W
Sbjct: 614 HEQNRQHERPDQWIR-PSDSVVLECKA-ASVESSDKFRFALTLRFPRFKQLRTDKRWDQA 671
Query: 256 LDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTDVSDI 315
L VQ F+E+ + ++ ++ + K+ R+S KK ++++ + T +
Sbjct: 672 LSVQEFLEVKTKVEIEKSEKEKEFKIEQSRRKRARTS----KKPLAVMGNDTTTTPYAGP 727
Query: 316 KGETSIFSDMVFYFVNV---PPAYSLDSLHKMVVENGGTFSMNLNNSVTHCVAADNKGLK 372
K + IF + FY + P S L ++ NGG + + AD + +K
Sbjct: 728 K--SKIFDALSFYVMTEQMHPVKKSKADLEALIKANGGRLVQRDSTDKNLIIIADKRLIK 785
Query: 373 YEAAKRRG--DVIHYSWVLDCCSQKK--------LLQLQP-KYYLHLSDSSKKKLQEEVD 421
+ ++R +++ W+ DC +Q + LL +P ++ L+L D + + + VD
Sbjct: 786 VASLEKRATNNIVKPIWIQDCITQNEADTGALPYLLPFEPNRHMLYLHDDDQFEFESNVD 845
Query: 422 EFSDLYFWDL-DLADIKQLLSNVDRSEDPKTI---DYYKK-----KYCPQDKWSCFHGCC 472
E D Y D+ D+ ++++ L + + E P T D+ K+ K Q K FH
Sbjct: 846 ENGDSYARDIADVEEMRKFLDGMAKPESPATFQRHDFLKQLEDHGKPLEQLKTHMFHSVK 905
Query: 473 IYFYHSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNN---LANATHVVV 520
F + + + +W + LA K F G + +N THV+V
Sbjct: 906 AVFSYDGD--NKEWSLRAQLA----KNYFRFGDGLIADNEEEEEGVTHVIV 950
>gi|342889579|gb|EGU88617.1| hypothetical protein FOXB_00866 [Fusarium oxysporum Fo5176]
Length = 984
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 136/485 (28%), Positives = 225/485 (46%), Gaps = 51/485 (10%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLII 122
A + D +E +E + N EG+VLK+ S + R+ WLK+KPEY+ G LD +II
Sbjct: 471 ATSADAIEPLLREVVANASEGLVLKNPRSMYRLNSRNDDWLKVKPEYMSEFGESLDCVII 530
Query: 123 GGYYGSGRRGGEVAQFLVAL---AERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 179
GGYYGSG+RGG ++ FL L P + SF +VG G E D + +
Sbjct: 531 GGYYGSGKRGGMLSSFLCGLRVTQNHIQAGANPEKCFSFFKVGGGFRAE--DYAEIRHRT 588
Query: 180 YFRKYEYPKRAPPSFYQVTNNSK----ERPDVWIESPEKSIILSITSDIRTIRSEVFSAP 235
+ E+ ++ PPS Y + ERPDVWI K ++ S+ F+
Sbjct: 589 EGKWIEWDQKNPPSKYIELGGGELRQYERPDVWIRP--KDSVVVSVKAASVGPSDQFARG 646
Query: 236 YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKG 295
++LRFPR R+R D+ W L ++ F EL + ++ KE +D+ R + K
Sbjct: 647 FTLRFPRFRRLRLDRTWDTALSLEEFQELKERVD---EESKEKAMTVEDRK---RRNPKR 700
Query: 296 EKKNVSIVPSHFLQTDVSDIKGE-TSIFSDMVFYFVN---VPPAYSLDSLHKMVVENGGT 351
K+ ++I V++ KGE T++F + F ++ P + L ++ ENGGT
Sbjct: 701 VKRELTIAGE---DATVAEFKGEMTNLFEGLDFCVLSEALRPYKKTKAQLEAIIKENGGT 757
Query: 352 FSMNLNNSVTHCVAADNKGLKYEAAKRRG--DVIHYSWVLDCCSQKK---LLQLQPKYYL 406
+ AD K +K + + G D+I W+ DC Q+ LL +P +
Sbjct: 758 VLQRAVPGTNMVLIADKKVVKVASLIKGGAVDIIRPKWIRDCLEQELGAFLLPFEPSHLF 817
Query: 407 HLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNVDRSEDPKTIDYYKKKYCPQ---- 462
H +D+ + ++ D+F D Y DL + ++++L+ ++ + ED D K ++ Q
Sbjct: 818 HATDALHRAAEDNTDQFGDSYARDLSIEELRELMQDIPKIEDGTQFD--KNEFLQQLEEH 875
Query: 463 ----DKWSCF-HGCCIYFYHSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNL--ANA 515
+ F C+ +H+ E + RLK + + GG V ++ +
Sbjct: 876 GKDLGRLRSFTFRRCVVLFHAVEAGDN--------KISRLKHLVKYGGGNVTDDTDDLSV 927
Query: 516 THVVV 520
THVV+
Sbjct: 928 THVVI 932
>gi|322702069|gb|EFY93817.1| DNA ligase I, ATP-dependent family protein [Metarhizium acridum
CQMa 102]
Length = 987
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 144/535 (26%), Positives = 243/535 (45%), Gaps = 49/535 (9%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLII 122
A D +E +E + N EG+VLK+ S + R+ WLK+KPEY+ G LD L+I
Sbjct: 478 ATTADAIEPMLREVVANASEGLVLKNPRSMYRLNSRNDDWLKVKPEYMSEFGESLDCLVI 537
Query: 123 GGYYGSGRRGGEVAQFLVAL---AERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 179
GGYYGSG+RGG ++ FL L P + SF +VG G E+ + + +
Sbjct: 538 GGYYGSGKRGGTLSSFLCGLRVSQNHIQAGDNPEKCYSFFKVGGGFRGEDYAEIRHRTEG 597
Query: 180 YFRKYEYPKRAPPSFYQVTNNSK----ERPDVWIESPEKSIILSITSDIRTIRSEVFSAP 235
+ E+ +R PP+ Y + ERPDVWI P S++LS + S+ F+
Sbjct: 598 KW--VEWDRRKPPTEYIELGGGESKQFERPDVWIR-PRDSVVLSAKA-ASVGPSDSFAMG 653
Query: 236 YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKG 295
Y+LRFPR R+R D+ W L V F EL + ++ KE +D+ R + K
Sbjct: 654 YTLRFPRFRRLRLDRAWDSALSVDEFEELKRQVD---REAKEKAMTVEDRR---RRNPKR 707
Query: 296 EKKNVSIVPSHFLQTDVSDIKGETS-IFSDMVFYFVN---VPPAYSLDSLHKMVVENGGT 351
K++V IV + +GE S +F + F ++ P + L ++ ENGGT
Sbjct: 708 AKRSVVIVGE---DATAVEFRGEASHVFDGLEFCVLSESLKPYKKTKAQLEAVIKENGGT 764
Query: 352 FSMNLNNSVTHCVAADNKGLKYEAAKRRGDV--IHYSWVLDCCSQKK--LLQLQPKYYLH 407
S + AD +K + + G+V I W+ DC +Q LL + + H
Sbjct: 765 ISQRAVAGTNMVLIADKNVVKVASLIKGGNVNIIRPKWIRDCVAQGGDFLLPYEEGHLFH 824
Query: 408 LSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNVDRSEDPKTIDYY------KKKYCP 461
++ + + D + D Y D+ + +++ +L + + E+ D++ + K
Sbjct: 825 ATEELRAIAAKNTDMYGDSYARDVSVDELRGILGGMPKVEEAFDGDHFLAELEERGKGIT 884
Query: 462 QDKWSCFHGCCIYFYHSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNL-ANATHVVV 520
+ + C ++F + + ++ ++ +L + + GGKV ++L THVVV
Sbjct: 885 ELRGFMMRRCVVHF-RAVDGVNG--------SMGKLVHYVMYTGGKVVDSLREGVTHVVV 935
Query: 521 LSVLGYDVNFNSLTESFTAREKHLLWNKKLHVVRSQWLEDCLAKEQKSEEYEYSL 575
+ D + T R + W K V+ W+ DC + +E +Y +
Sbjct: 936 MG----DDPMEVGETADTVRRQVSSWAKVPRVLGDGWVLDCWKERTLLDEEKYMI 986
>gi|350632724|gb|EHA21091.1| hypothetical protein ASPNIDRAFT_55114 [Aspergillus niger ATCC 1015]
Length = 1009
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 149/551 (27%), Positives = 253/551 (45%), Gaps = 59/551 (10%)
Query: 69 EVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIGGYYG 127
++E ++ + EG+V+K+ S + +R W+K+KPEY+ G LD+++IGGYYG
Sbjct: 477 QIEAALRKVVAEASEGLVVKNPRSPYRLNERHDDWMKVKPEYMTEFGESLDLIVIGGYYG 536
Query: 128 SGRRGGEVAQFLVALAERPAPDTY---PRRFISFCRVGTGLSDEELDAVVTKLKPYFRKY 184
SG RGG ++ FL L A + + SFC+VG G + + + + +
Sbjct: 537 SGHRGGGLSSFLCGLRADNASSSQGIGATKCYSFCKVGGGFTAADYANIRHHTDGKWVDW 596
Query: 185 EYPKRAPPSFYQVTNNSK--ERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
P++ P ++ ++ S ERPD WI+ PE S++L + + ++ S+ F +LRFPR
Sbjct: 597 N-PRKPPTAYIELAGGSAQHERPDQWIK-PEDSVVLCVKAASVSV-SDQFRVGLTLRFPR 653
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSI 302
R+R DK W L +Q F++L S+ QK KE+ + FR R K
Sbjct: 654 FKRLRMDKDWKSALSMQEFLDL-KSNVEKEQKEKEF------NVENFRKKRVKRPKKALT 706
Query: 303 VPSHFLQTDVSDIKGETSIFSDMVFYFVN---VPPAYSLDSLHKMVVENGG-TFSMNLNN 358
V + +V IF + F+ + P + L ++V NGG + N
Sbjct: 707 VAGYSPNAEVKYEGPSGHIFDGLNFFILTDSVAPNKKTKAELEQLVKLNGGKIYQTNKAA 766
Query: 359 SVTHCVAADNKGLKYEAAKRRGDV--IHYSWVLDCCSQKKL--------LQLQPKYYLHL 408
T C+ AD + +K + ++ GDV I SW+LDC Q ++ L L+P++
Sbjct: 767 PNTVCI-ADRRTVKAASLQKSGDVSLIRPSWILDCVRQNEIDAGLPDLLLPLEPRHMFFT 825
Query: 409 SDSSKKKLQEEVDEFSDLYFWDL---DLADIKQLLSNVDRSED--PKTIDYYKKKYCPQD 463
+ S ++++ VD F+D Y D+ +L + + +S + S D P+ K + Q+
Sbjct: 826 TPSKEEEVLTSVDRFNDSYARDVTKEELVSLLEKMSADNGSSDVPPRGEATKKLREAIQE 885
Query: 464 K----WS-----CFHGCCIYFYHST----EPLSPDWEVLLGLALRRLKLEISFHGGKVCN 510
K W F +F T +P P++ G L + F G V N
Sbjct: 886 KVDSGWDLPCGWLFQNLTFFFPDRTTQDPDPGEPEY-AGCGYRLSLARNTAKFAGATVVN 944
Query: 511 NLANA--THVVVLSVLGYDVNFNSLTESFTAREKHLLWNKKL-HVVRSQWLEDCLAKEQK 567
+ THVVV D + S + + L ++KL H+V ++W+E+ ++
Sbjct: 945 TYEDPSITHVVV------DPDTPSSEIATLRKTLSLRVDQKLPHIVTTEWIEESWEQQSF 998
Query: 568 SEEYEYSLKPT 578
+E Y +P
Sbjct: 999 LDEDRYHPRPA 1009
>gi|134057838|emb|CAK44569.1| unnamed protein product [Aspergillus niger]
Length = 1009
Score = 150 bits (378), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 149/551 (27%), Positives = 253/551 (45%), Gaps = 59/551 (10%)
Query: 69 EVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIGGYYG 127
++E ++ + EG+V+K+ S + +R W+K+KPEY+ G LD+++IGGYYG
Sbjct: 477 QIEAALRKVVAEASEGLVVKNPRSPYRLNERHDDWMKVKPEYMTEFGESLDLIVIGGYYG 536
Query: 128 SGRRGGEVAQFLVALAERPAPDTY---PRRFISFCRVGTGLSDEELDAVVTKLKPYFRKY 184
SG RGG ++ FL L A + + SFC+VG G + + + + +
Sbjct: 537 SGHRGGGLSSFLCGLRADNASSSQGIGATKCYSFCKVGGGFTAADYANIRHHTDGKWVDW 596
Query: 185 EYPKRAPPSFYQVTNNSK--ERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
P++ P ++ ++ S ERPD WI+ PE S++L + + ++ S+ F +LRFPR
Sbjct: 597 N-PRKPPTAYIELAGGSAQHERPDQWIK-PEDSVVLCVKAASVSV-SDQFRVGLTLRFPR 653
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSI 302
R+R DK W L +Q F++L S+ QK KE+ + FR R K
Sbjct: 654 FKRLRMDKDWKSALSMQEFLDL-KSNVEKEQKEKEF------NVENFRKKRVKRPKKALT 706
Query: 303 VPSHFLQTDVSDIKGETSIFSDMVFYFVN---VPPAYSLDSLHKMVVENGG-TFSMNLNN 358
V + +V IF + F+ + P + L ++V NGG + N
Sbjct: 707 VAGYSPNAEVKYEGPSGHIFDGLNFFILTDSVAPNKKTKAELEQLVKLNGGKIYQTNKAA 766
Query: 359 SVTHCVAADNKGLKYEAAKRRGDV--IHYSWVLDCCSQKKL--------LQLQPKYYLHL 408
T C+ AD + +K + ++ GDV I SW+LDC Q ++ L L+P++
Sbjct: 767 PNTVCI-ADRRTVKAASLQKSGDVSLIRPSWILDCVRQNEIDAGLPDLLLPLEPRHMFFT 825
Query: 409 SDSSKKKLQEEVDEFSDLYFWDL---DLADIKQLLSNVDRSED--PKTIDYYKKKYCPQD 463
+ S ++++ VD F+D Y D+ +L + + +S + S D P+ K + Q+
Sbjct: 826 TPSKEEEVLTSVDRFNDSYARDVTKEELVSLLEKMSADNGSSDVPPRGEATKKLREAIQE 885
Query: 464 K----WS-----CFHGCCIYFYHST----EPLSPDWEVLLGLALRRLKLEISFHGGKVCN 510
K W F +F T +P P++ G L + F G V N
Sbjct: 886 KVDSGWDLPCGWLFQNLTFFFPDRTTQDPDPGEPEY-AGCGYRLSLARNTAKFAGATVVN 944
Query: 511 NLANA--THVVVLSVLGYDVNFNSLTESFTAREKHLLWNKKL-HVVRSQWLEDCLAKEQK 567
+ THVVV D + S + + L ++KL H+V ++W+E+ ++
Sbjct: 945 TYEDPSITHVVV------DPDTPSSEIATLRKTLSLRVDQKLPHIVTTEWIEESWEQQSF 998
Query: 568 SEEYEYSLKPT 578
+E Y +P
Sbjct: 999 LDEDRYHPRPA 1009
>gi|428174096|gb|EKX42994.1| Lig4/DNL4/DNA ligase IV non-homologous end joining DNA repair
[Guillardia theta CCMP2712]
Length = 975
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 109/394 (27%), Positives = 177/394 (44%), Gaps = 54/394 (13%)
Query: 84 GIVLKDLGSKWEPGDR-SGKWLKLKPEYIRAGSDLDVLIIGGYYGSGRRGGEVAQFLVAL 142
GIVLK+ SK+ P R G+W+KLKP+Y+ + D+LI+GG YG G+RGG+V QF+ A+
Sbjct: 436 GIVLKNPESKYVPKSREKGEWMKLKPDYLGGSEEFDLLIVGGTYGKGQRGGQVWQFICAV 495
Query: 143 AERPAPDTYPRR-FISFCRVGTGLSDEELDAVVTKLK----PYFR--------------- 182
A+ P P F + CRVGTG + EE + LK PY R
Sbjct: 496 ADEPREKGKPPSCFRTMCRVGTGKTREEFMQLFNLLKENMRPYKRLTQGKTAVDRDVKFE 555
Query: 183 --------KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA 234
+++ A P + N+KE DV + P KS +L++ +D R I S VF A
Sbjct: 556 RKQDFTSVQWQQKDGADPVEVLFSGNAKEEVDV-VFDPRKSRVLTLVADYRLIESNVFMA 614
Query: 235 P-----------YSLRFPRIDRVRY--------DKPWHDCLDVQSFVELVHSSNGT--TQ 273
++LRFPRI Y +KPW DC+ + F E + S
Sbjct: 615 ARGVEGKDDKTGWTLRFPRIREGGYRCGEMGGDEKPWFDCMTSRQFEEAIARSQQPYHIH 674
Query: 274 KGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFVNVP 333
+ + + + K ++ S + ++ + + K +F M +
Sbjct: 675 EMQAFNKAKGGKKRKLSQSTGRRTRGARVIEDAAFSGNSYEAK--YDVFKGMEICVLPGD 732
Query: 334 PAYSLDSLHKMVVENGGTFSMNLNNSVTHCVAADNKGLKYEAAKRRGDVIHYSWVLDCCS 393
P ++ ++ E G T N+++ TH + + DVI WV +C
Sbjct: 733 PEQKRET-EQLARELGATMVANIDSLTTHIIGMRMDQRFKNLKEADCDVIGRHWVSECSE 791
Query: 394 QKKLLQLQPKYYLHLSDSSKKKLQEEVDEFSDLY 427
+K+L++L P++ +H S + +K+ D+F D +
Sbjct: 792 KKRLVELAPRHMMHASAARRKEFHNLYDKFGDSF 825
>gi|358375799|dbj|GAA92375.1| DNA ligase [Aspergillus kawachii IFO 4308]
Length = 1009
Score = 149 bits (376), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 150/551 (27%), Positives = 247/551 (44%), Gaps = 59/551 (10%)
Query: 69 EVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIGGYYG 127
++E + + EG+VLK+ S + +R W+K+KPEY+ G LD+++IGGYYG
Sbjct: 477 QIEAALRRVVAEASEGLVLKNPRSPYRLNERHDDWMKVKPEYMTEFGESLDLIVIGGYYG 536
Query: 128 SGRRGGEVAQFLVAL----AERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRK 183
SG RGG +A FL L A +T + + SFC+VG G + + + +
Sbjct: 537 SGHRGGGLASFLCGLRVDNASSSQGNTSTKCY-SFCKVGGGFTAADYANIRHHTDGKWMD 595
Query: 184 YEYPKRAPPSFYQVT--NNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFP 241
+ PK P ++ ++ N ERPD WI+ PE S++L + + +I S+ F +LRFP
Sbjct: 596 WN-PKNPPTAYIELAGGNAQHERPDQWIK-PEDSVVLCVKAASVSI-SDQFRVGLTLRFP 652
Query: 242 RIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVS 301
R R+R DK W L +Q F++L S+ QK KE+ + FR R K
Sbjct: 653 RFKRLRMDKDWKSALSMQEFLDL-KSNVEQEQKEKEFS------VENFRKKRVKRPKKEL 705
Query: 302 IVPSHFLQTDVSDIKGETSIFSDMVFYFVN---VPPAYSLDSLHKMVVENGG-TFSMNLN 357
V + +V IF F+ + P S L ++V NGG + N
Sbjct: 706 TVAGYSPSAEVKYEGPSGHIFDGFNFFILTDSVAPIKKSKAELEQLVKLNGGKIYQTNKA 765
Query: 358 NSVTHCVAADNKGLKYEAAKRRGDV--IHYSWVLDCCSQKKL--------LQLQPKYYLH 407
T C+A D + +K + ++ GDV I SW+LDC Q ++ L L+P++
Sbjct: 766 APNTVCIA-DRRTVKAASLQKNGDVSIIRPSWILDCVRQNEIDAGLPDLLLPLEPRHMFF 824
Query: 408 LSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNVDRSED-----PKTIDYYKKKYCPQ 462
+ S ++++ VD+F+D Y D+ ++ LL + + P+ K + Q
Sbjct: 825 TTPSKEEEVLTSVDQFNDSYARDVTREELVSLLDKMSADKGSSDVPPRGEATKKLREVIQ 884
Query: 463 DK----WSC-----FHGCCIYFYHSTEPLSPDW----EVLLGLALRRLKLEISFHGGKVC 509
++ W F +F T + PD G L + F G V
Sbjct: 885 ERVDAGWDLPCGWLFQNLTFFFPDQTTQV-PDAGNSEHPCCGYRLSLARNTARFAGATVV 943
Query: 510 NNLANA--THVVVLSVLGYDVNFNSLTESFTAREKHLLWNKKLHVVRSQWLEDCLAKEQK 567
N+ + THVVV +L ++ +AR K H+V ++W+++ ++
Sbjct: 944 NDCEDPSITHVVV-DPDTPSTEIATLRKTLSARADQ----KLPHIVTTEWIKESWEQQSL 998
Query: 568 SEEYEYSLKPT 578
+E Y +P
Sbjct: 999 LDEDRYHPRPA 1009
>gi|171686124|ref|XP_001908003.1| hypothetical protein [Podospora anserina S mat+]
gi|170943023|emb|CAP68676.1| unnamed protein product [Podospora anserina S mat+]
Length = 999
Score = 148 bits (374), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 144/589 (24%), Positives = 254/589 (43%), Gaps = 103/589 (17%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLII 122
A D +E F + + EG++LK+ S+++ R+ W+K+KPEY+ G LD +II
Sbjct: 435 ATTPDAIEPFLRRVVAEASEGLILKNPRSRYQLNSRNNDWIKVKPEYMSEYGESLDCVII 494
Query: 123 GGYYGSGRRGGEVAQFL--VALAE---RPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
GGY+GSGRRGG ++ FL V ++E R + +SFC+VG GL E+ +
Sbjct: 495 GGYFGSGRRGGILSSFLCGVRVSENHVRSGAALTREKCLSFCKVGGGLKAEDYAEIRHHT 554
Query: 178 KPYFRKYEYPKRAPPSFYQVTNNSK---ERPDVWIESPEKSIILSITSDIRTIRSEVFSA 234
+ ++ ++ PP+ Y K E+PDVWI P +S+++SI + S+ F+
Sbjct: 555 EGKWQDWQASN--PPTDYIELAGGKMQYEKPDVWIR-PSESVVMSIKA-ASIGPSDQFAM 610
Query: 235 PYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRK 294
++LRFPR ++R DK W + +D FV L+ +K ++ ++ K K + +K
Sbjct: 611 GWTLRFPRFRKLRLDKSWDEGMDASDFV-LLKDKVKEEEKERKAMEMESRKRKPAKRLKK 669
Query: 295 -----GEKKNVSIVPSHFLQTDVSDIKGE-----------------TSIFSDMVFYFVN- 331
G N + P F + +IK E +F + F ++
Sbjct: 670 ELVIAGTDPNAA--PVEFAEGG-DNIKAEPMSQVAFPPPQARRKSDNQLFQGLDFCVLSE 726
Query: 332 --VPPAYSLDSLHKMVVENGGTFSMNLNNSVTHCVAADNKGLKYEAAKRRG--DVIHYSW 387
P S L K++ E+GG ++ + A+ ++ + KR G D++ W
Sbjct: 727 AVKPRKMSKPDLEKLIKEHGGRIHQQVDKGGNMILLAEKNVVRVASLKRAGDADIVKPKW 786
Query: 388 VLDCCSQKK----LLQLQPKYYLHLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNV 443
V DC +Q LL + + H ++ K E D++ D Y D+ +++ ++ ++
Sbjct: 787 VFDCLAQNNGEGYLLPFEEGHLFHATEEMVKLAAENTDQYGDSYVRDVTPDELRDIIDDM 846
Query: 444 ----------DRSEDPKTIDYYKKKYCPQ----------DKWSCFHGCCIYF-------- 475
D D +T ++ + + Q K F C +YF
Sbjct: 847 RTKGGVKEEEDAFHDDRTGEFDAEHFLDQLEERGRGLEGLKSFLFRRCRVYFPVAAKEEE 906
Query: 476 -YHSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNLAN--ATHVVVLS-------VLG 525
+ P S + + + +L+ E+ F G V L + THVVV+ L
Sbjct: 907 EEEKSGPSSTELKAV------KLQNEVKFGNGTVVGGLDDKEITHVVVVGDGEKERKELA 960
Query: 526 YDVNFNSLTESFTAREKHLLWNKKLHVVRSQWLEDCLAKEQKSEEYEYS 574
V + + R +V +W+EDC+ + +E Y+
Sbjct: 961 ASVRYEVSSRRHVPR-----------IVTGRWVEDCVKEGTLVDEEGYA 998
>gi|345568495|gb|EGX51389.1| hypothetical protein AOL_s00054g459 [Arthrobotrys oligospora ATCC
24927]
Length = 979
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 112/392 (28%), Positives = 191/392 (48%), Gaps = 25/392 (6%)
Query: 67 VDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIR-AGSDLDVLIIGGY 125
V++++ +E + EG+V+K+ S + GDR+ WLK+KP+Y++ G + D+L+IGGY
Sbjct: 464 VEDIKVKLREVVAEASEGLVIKNPRSMYCLGDRNDDWLKVKPDYVKDLGENFDLLVIGGY 523
Query: 126 YGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYE 185
YG G RGG ++ F+ L AP+ ++ SF +VG G S ++ + + + + + +
Sbjct: 524 YGQGSRGGRLSSFMCGLR---APNG---KYYSFTKVGGGFSAQDYNWIRHQTEGKWNTWN 577
Query: 186 YPKRAPPSFY-QVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRID 244
R PP+ Y ++ ERPD WI+ PE SI++S+ T S+ F +LRFPR
Sbjct: 578 --TRKPPAEYIELAAGQAERPDEWIK-PEDSIVISVKGAAVT-PSDQFKTGLTLRFPRFT 633
Query: 245 RVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVP 304
++R D+ W+ L + F + QK E Q K+ R K + + P
Sbjct: 634 KLREDRSWNSALSLNEFFRRKRELDEQQQKENEMHIEQRRATKRVRKQFKIAGADQIVEP 693
Query: 305 SHFLQTDVSDIKGETSIFSDMVFYFV--NVPPAYSLDSLHKMVVENGGTFSMNLNNSVTH 362
VS+ +F M F+ + + P S + +V GG + +
Sbjct: 694 -----VAVSN----DHLFEGMNFWIMTESSKPRKSKAEIEGIVKACGGNIFQSDGGAPNV 744
Query: 363 CVAADNKGLKYEAAKRRG-DVIHYSWVLDCCSQKKLLQLQP-KYYLHLSDSSKKKLQEEV 420
AD +K K++ +VI WV DC +L L+ ++ L + SK K +E +
Sbjct: 745 KCIADKSVVKVLTLKKKNVEVIRPQWVFDCQELGCILPLEADRHMLFIPPDSKDKFEETI 804
Query: 421 DEFSDLYFWDLDLADIKQLLSNVDRSEDPKTI 452
D + D Y+ D D+ +LL + + E+ +TI
Sbjct: 805 DPYGDSYYRDTTAEDLSKLLRDCVKLENDETI 836
>gi|258567260|ref|XP_002584374.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237905820|gb|EEP80221.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 1009
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 114/398 (28%), Positives = 199/398 (50%), Gaps = 23/398 (5%)
Query: 63 VAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLI 121
V ++ +E ++ + EG+VLK+ S + +R W+K+KPEY+ G LD ++
Sbjct: 460 VGYSAAHIEPQLRKVVAEASEGLVLKNPDSPYRLNERHDDWMKVKPEYMTEFGESLDCVV 519
Query: 122 IGGYYGSGRRGGEVAQFLVALAERPA---PDTYPRRFISFCRVGTGLSDEELDAVVTKLK 178
IGGYYGSG+RGG +A FL L A P + SFC+VG G + + V
Sbjct: 520 IGGYYGSGKRGGALATFLCGLRVDEAQIRQGANPMKCYSFCKVGGGFTAADYANVRHHTD 579
Query: 179 PYFRKYEYPKRAPPSFYQVTNNSK--ERPDVWIESPEKSIILSITSDIRTIRSEVFSAPY 236
++ ++ PK+ P F ++ ERPDVWI P++S++L + + T S+ F
Sbjct: 580 SKWKDWD-PKKPPTEFIELAGGDAQYERPDVWIR-PDESVVLCVKASSVT-PSDQFRLGL 636
Query: 237 SLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGE 296
++RFPR R+R DK W L +Q F++L S+ QK KE+ + + + ++ + + K
Sbjct: 637 TVRFPRFKRLRMDKTWESALSIQEFMDL-KSNAEREQKEKEF-KIDNSRKRKPKRTTKKP 694
Query: 297 KKNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGG-TFSMN 355
+ + DVSD + S +V P S L K++ NGG + N
Sbjct: 695 LTIAGYDENKKAEFDVSDQIFTSKSDSLVVMTDALEPEKKSKLELEKLIKANGGKIYQTN 754
Query: 356 LNNSVTHCVAADNKGLKYEAAKR--RGDVIHYSWVLDCCSQKKL--------LQLQPKYY 405
S T C+ A+ + +K + ++ + +++ SW+LDC Q + L L+P++
Sbjct: 755 TAASNTICI-AERRTVKVASIQKAAKENIVRPSWLLDCIKQNEADLGLPDLLLPLEPRHM 813
Query: 406 LHLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNV 443
++++ VD++SD Y D ++ +LL+++
Sbjct: 814 YFTVKGQEQEISSNVDQYSDSYVRDTTTKELTKLLASM 851
>gi|341603861|dbj|BAK53401.1| DNA ligase IV [Aspergillus luchuensis]
Length = 1111
Score = 146 bits (369), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 120/393 (30%), Positives = 192/393 (48%), Gaps = 33/393 (8%)
Query: 69 EVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIGGYYG 127
++E + + EG+VLK+ S + +R W+K+KPEY+ G LD+++IGGYYG
Sbjct: 477 QIEAALRRVVAEASEGLVLKNPRSPYRLNERHDDWMKVKPEYMTEFGESLDLIVIGGYYG 536
Query: 128 SGRRGGEVAQFLVAL----AERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRK 183
SG RGG +A FL L A +T + + SFC+VG G + + + +
Sbjct: 537 SGHRGGGLASFLCGLRVDNASSSQGNTSTKCY-SFCKVGGGFTAADYANIRHHTDGKWMD 595
Query: 184 YEYPKRAPPSFYQVT--NNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFP 241
+ PK P ++ ++ N ERPD WI+ PE S++L + + +I S+ F +LRFP
Sbjct: 596 WN-PKNPPTAYIELAGGNAQHERPDQWIK-PEDSVVLCVKAASVSI-SDQFRVGLTLRFP 652
Query: 242 RIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVS 301
R R+R DK W L +Q F++L S+ QK KE+ + FR R K
Sbjct: 653 RFKRLRMDKDWKSALSMQEFLDL-KSNVEQEQKEKEFS------VENFRKKRVKRPKKEL 705
Query: 302 IVPSHFLQTDVSDIKGETSIFSDMVFYFVN---VPPAYSLDSLHKMVVENGG-TFSMNLN 357
V + +V IF F+ + P S L ++V NGG + N
Sbjct: 706 TVAGYSPSAEVKYEGPSGHIFDGFNFFILTDSVAPIKKSKAELEQLVKLNGGKIYQTNKA 765
Query: 358 NSVTHCVAADNKGLKYEAAKRRGDV--IHYSWVLDCCSQKKL--------LQLQPKYYLH 407
T C+ AD + +K + ++ GDV I SW+LDC Q ++ L L+P++
Sbjct: 766 APNTVCI-ADRRTVKAASLQKNGDVSIIRPSWILDCVRQNEIDAGLPDLLLPLEPRHMFF 824
Query: 408 LSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLL 440
+ S ++++ VD+F+D Y D+ ++ LL
Sbjct: 825 TTPSKEEEVLTSVDQFNDSYARDVTREELVSLL 857
>gi|378726686|gb|EHY53145.1| DNA ligase 4 [Exophiala dermatitidis NIH/UT8656]
Length = 1044
Score = 146 bits (368), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 108/430 (25%), Positives = 197/430 (45%), Gaps = 55/430 (12%)
Query: 63 VAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLI 121
V V++VE +E + EG++LK+ S + DR+G W K+KPEY+ G D LI
Sbjct: 468 VGRTVEDVENCLREVVAQASEGLMLKNPRSAYRLDDRNGDWQKVKPEYMTGLGESFDCLI 527
Query: 122 IGGYYGSGRRGGEVAQFLVAL--------------------------AERPAPDTYPRRF 155
IG +YGSGRRGG+++ FL L +P D ++F
Sbjct: 528 IGAFYGSGRRGGKLSSFLCGLRAPANYKSPFQSQNRRQSQVQSQSQSQAQPEGDEPSQKF 587
Query: 156 ISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNS---KERPDVWIESP 212
+SF +VG G++ + + + + ++ PKR P + ++ S KERPDVWI+ P
Sbjct: 588 VSFFKVGGGMTANDYATIQHETDGKWLDWD-PKRPPTQYIELGGGSSVQKERPDVWIK-P 645
Query: 213 EKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTT 272
E S+++ + + + SE ++ +LRFPR ++R DK W L ++ F +L +
Sbjct: 646 EDSLVIEVKA-AQVTASEDYACGMTLRFPRFKKLRRDKDWRTALSLEEFKDLRDNIEKEQ 704
Query: 273 QKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTDVSDIKG--ETSIFSDMVFYFV 330
++ E + D K KQ + + KK +++ + + + + +F + FY +
Sbjct: 705 EQKME---VDDAKKKQRKGNAPARKKMITVAGYNAKAVNNATLPDGPRGKVFEGLTFYIM 761
Query: 331 N----VPPAYSLDSLHKMVVENGGTFSMNLNNSVTHCVAADNKGLKYEAAKRRGD--VIH 384
P S L +V NGG A + +K + +++ + ++
Sbjct: 762 TESTAPAPKKSKLELEALVKANGGRIVQTHTVVPDTICVATRRTVKVASLQKQNNKEIVR 821
Query: 385 YSWVLDCCSQKK----------LLQLQPKYYL-HLSDSSKKKLQEEVDEFSDLYFWDLDL 433
W+ DC Q K +L L+P+ +L + D K + + VD++ D + D +
Sbjct: 822 PLWIFDCIEQAKKDFAKGYPEMVLPLEPERHLFFVPDEMKDRYADNVDQYGDSFARDTSV 881
Query: 434 ADIKQLLSNV 443
++ + + +
Sbjct: 882 DELSRCMDQM 891
>gi|322703017|gb|EFY94634.1| DNA ligase I, ATP-dependent family protein [Metarhizium anisopliae
ARSEF 23]
Length = 987
Score = 145 bits (367), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 142/535 (26%), Positives = 237/535 (44%), Gaps = 49/535 (9%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLII 122
A D +E +E + + EG+VLK+ S + R+ WLK+KPEY+ G LD L+I
Sbjct: 478 ATTADAIEPMLREVVASASEGLVLKNPRSMYRLNSRNDDWLKVKPEYMSEFGESLDCLVI 537
Query: 123 GGYYGSGRRGGEVAQFLVALAERP----APDTYPRRFISFCRVGTGLSDEELDAVVTKLK 178
GGYYGSG+RGG ++ FL L P A D P + SF +VG G E+ + + +
Sbjct: 538 GGYYGSGKRGGTLSSFLCGLRVSPNHIQAGDN-PEKCYSFFKVGGGFRGEDYAEIRHRTE 596
Query: 179 PYFRKYEYPKRAPPSFYQVTNNSK----ERPDVWIESPEKSIILSITSDIRTIRSEVFSA 234
+ E+ +R PP+ Y + ERPDVWI P S++LS + S+ F+
Sbjct: 597 GKW--VEWDRRNPPTEYVELGGGEGRQLERPDVWIR-PRDSVVLSAKA-ASVGPSDSFAM 652
Query: 235 PYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRK 294
Y+LRFPR R+R D+ W L V F EL + ++ +E +D R R
Sbjct: 653 GYTLRFPRFRRLRLDRAWDSALSVDEFEELKRQVD---REAREKAMTVED-----RKRRH 704
Query: 295 GEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFVN---VPPAYSLDSLHKMVVENGGT 351
++ S+V + T V+ + +F + F ++ P + L ++ ENGGT
Sbjct: 705 PKRAKRSVVIAGEDATAVASRGAASHVFDGLEFCVLSESLRPWRKTKAQLEAVIKENGGT 764
Query: 352 FSMNLNNSVTHCVAADNKGLKYEAAKRRG--DVIHYSWVLDCCSQKK--LLQLQPKYYLH 407
S + AD +K + + G ++I W+ DC Q LL + + H
Sbjct: 765 VSQRAVAGTRMVLVADKNVVKVASLIKGGNANIIRPKWIRDCVEQGGDFLLPYEEGHLFH 824
Query: 408 LSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNVDRSEDPKTIDYY------KKKYCP 461
+++ + D + D Y D+ + +++ ++ + + E+ D + + K
Sbjct: 825 ATEALGAVAAKNTDMYGDSYARDVSVDELRGIVGAMPKVEEAFDGDRFLAELEERGKGIA 884
Query: 462 QDKWSCFHGCCIYFYHSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNL-ANATHVVV 520
+ + C ++F P +L + + GGKV ++L THVVV
Sbjct: 885 ELRGFMMRRCVVHFRAVDGVDGPT---------GKLVHYVMYTGGKVVDSLREGVTHVVV 935
Query: 521 LSVLGYDVNFNSLTESFTAREKHLLWNKKLHVVRSQWLEDCLAKEQKSEEYEYSL 575
+ D + TAR + W K V+ W+ DC + +E +Y +
Sbjct: 936 VG----DDAMQVGEAADTARRQVSSWAKVPRVLGHGWVLDCWKERTLLDEEKYVI 986
>gi|400593724|gb|EJP61643.1| DNA ligase I [Beauveria bassiana ARSEF 2860]
Length = 1034
Score = 145 bits (366), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 143/550 (26%), Positives = 245/550 (44%), Gaps = 63/550 (11%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLII 122
A + D +E ++ + N EG+VLK+ S + R+ WLK+KPEY+ G LD ++I
Sbjct: 510 ATSPDAIEPLLRDVVANASEGLVLKNPRSMYRLNSRNDDWLKVKPEYMSEFGESLDCVVI 569
Query: 123 GGYYGSGRRGGEVAQFLVALAERP---APDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 179
GGYYGSG+RGG ++ +L L P P + SF +VG G E+ + + +
Sbjct: 570 GGYYGSGKRGGMLSSYLCGLRASPNHIKAGADPEKCFSFFKVGGGFRVEDYAEIRHRTEG 629
Query: 180 YFRKYEYPKRAPPSFYQVTNNSK----ERPDVWIESPEKSIILSITSDIRTIRSEVFSAP 235
+ ++ R PPS Y + ERPDVWI K ++ S+ F+
Sbjct: 630 KWIDWDV--RNPPSTYIELGGGEAKQYERPDVWIRP--KDSVVVSVKAASVGPSDSFARG 685
Query: 236 YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKG 295
Y+LRFPR R+R D+ W L V F L + ++ K+ +D+ ++ RK
Sbjct: 686 YTLRFPRFRRLRLDRAWDSALSVDEFQSLKQHVD---EESKDKAMTMEDRKRRNPKRRKR 742
Query: 296 EKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFVN---VPPAYSLDSLHKMVVENGGTF 352
E + IV ET++F + F ++ P +S L ++ ENGGT
Sbjct: 743 E---IVIVGGDVTGPSPQRTPEETALFRGIEFCVLSESLKPFKHSKAQLETLIKENGGTV 799
Query: 353 SMNLNNSVTHCVAADNKGLKYEAAKRRGDV--IHYSWVLDCCSQKK-----------LLQ 399
S + AD K +K + ++GDV I W+ DC +Q++ LL
Sbjct: 800 SQRAAPGTAMVLIADKKVVKVASLIKQGDVNIIRPRWIQDCLTQRQADADAGIADAFLLP 859
Query: 400 LQPKYYLHLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNVDRSEDPKTIDYYKKKY 459
+ + H +D+ + + D++ D Y DL L +++ L+ ++ + E + K+++
Sbjct: 860 YEEAHLFHATDALRHAAAQNTDQYGDSYARDLPLEELRALMRDMPKIESVDEAPFDKRQF 919
Query: 460 C-----------PQDKWSCFHGCCIYFYHSTEPLSPDWEVLLGLALRRLKLEISFHGGKV 508
Q + F C + F E + + + RL + + GGK
Sbjct: 920 LEQLEERGRDLSAQLRSMTFQRCVVGFQVGGEGVGKEADK------DRLARYVRYGGGKC 973
Query: 509 CNNLAN--ATHVVVLSVLGYDVN-FNSLTESFTAREKHLLWNKKLHVVRSQWLEDCLAKE 565
+ L + THVV ++GY + ++L ++R K +V + W+E C +
Sbjct: 974 VDGLESEELTHVV---LVGYSQDAADALRRELSSRA------KLPRLVSASWIETCWQER 1024
Query: 566 QKSEEYEYSL 575
+E +YS+
Sbjct: 1025 SLVDEEQYSV 1034
>gi|330935335|ref|XP_003304917.1| hypothetical protein PTT_17650 [Pyrenophora teres f. teres 0-1]
gi|311318253|gb|EFQ86998.1| hypothetical protein PTT_17650 [Pyrenophora teres f. teres 0-1]
Length = 988
Score = 145 bits (366), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 138/538 (25%), Positives = 245/538 (45%), Gaps = 56/538 (10%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLII 122
A + E+E ++ I EG+VLK+ S + R+ W+K+KPEY+ G LD +++
Sbjct: 476 ARSHTEIEPALRKVIAESSEGLVLKNPRSMYCLNQRNNDWMKVKPEYMSEFGESLDCIVV 535
Query: 123 GGYYGSGRRGGEVAQFLVALA----ERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLK 178
GGY+GSG RGG + FL AL +P Y + SF +VG G S E+ A+ + +
Sbjct: 536 GGYFGSGHRGGVHSSFLCALLTDKDAKPGDPKYEHCW-SFFKVGGGFSREDYAAIRGRTE 594
Query: 179 PYFRKYEYPKRAPPSFYQV----TNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA 234
+ ++ +R PP F ++ N ERPD WI P S++L + S+ F +
Sbjct: 595 GKWHNWD--RRRPPPFIELGGHEQNRQHERPDQWIR-PSDSVVLECKA-ASVESSDKFRS 650
Query: 235 PYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRK 294
+LRFPR +R DK W L +Q F+++ + + ++ ++ + K+ R++
Sbjct: 651 TLTLRFPRFKLLRVDKRWDQALSIQEFLDVKSRAEKEKSEKEKEFKIEQSRRKKARTT-- 708
Query: 295 GEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFVNV---PPAYSLDSLHKMVVENGGT 351
KK +++V + T + + +F + FY + P S L +V NGG
Sbjct: 709 --KKPLTVVGDDAVITPYAG--AVSKVFEGLTFYIMTEQVHPSKKSKADLEALVKANGGR 764
Query: 352 FSMNLNNSVTHCVAADNKGLKYEAAKRRG--DVIHYSWVLDCCSQKK--------LLQLQ 401
+ + AD + +K + ++RG +++ W+ DC Q + LL +
Sbjct: 765 LIQRDTTAKDLVIVADKRLIKVASLEKRGTNNIVKPIWLQDCIMQNERDAGAPPYLLPFE 824
Query: 402 PK---YYLHLSDSSKKKLQEEVDEFSDLYFWDL-DLADIKQLLSNVDRSEDPKTIDYYKK 457
P YYLH D + + +D+ D Y D+ D+ ++++LL V+ + + D + +
Sbjct: 825 PNRHMYYLH--DDDQMDYEANLDDNGDSYARDITDVDEMRRLLDGVEIPKSKFSRDAFLE 882
Query: 458 KYCPQDKWSCFHGCCIYFYHSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCN--NLANA 515
+ + F Y + + + EV L +R K + F GG+V + +
Sbjct: 883 QL--EGHGEDFSQFKTYMFQNVKAKFSG-EVGSELRVRLAKNYVRFGGGQVADGGDEEGV 939
Query: 516 THVVVLSVLGYDVNFNSLTESFTAREKHLLWNKKLHVVRSQWLEDCLAKEQKSEEYEY 573
THVVV ++ A+ K + N VV W+E C + + +E +
Sbjct: 940 THVVVAD-----------GQTSAAKGKARV-NGLARVVGLGWIEKCWEEGTRIDEERF 985
>gi|339238913|ref|XP_003381011.1| DNA ligase 4 [Trichinella spiralis]
gi|316976028|gb|EFV59381.1| DNA ligase 4 [Trichinella spiralis]
Length = 700
Score = 143 bits (360), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 151/629 (24%), Positives = 264/629 (41%), Gaps = 114/629 (18%)
Query: 42 LSQLRSQIMAADQTGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSG 101
L QLRS + + + + + D+V + ET+ +EGI+
Sbjct: 96 LKQLRSAVRDMPERMQIVDQQLVDSADQVIELLNETVGRGEEGIM--------------- 140
Query: 102 KWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAER--------------- 145
P+YI DLDVLI+GGY+G+GRR ++ F++AL E
Sbjct: 141 ------PDYINGLVDDLDVLIVGGYFGTGRRSNLLSHFMIALMENYDKKIIETVDVDEQE 194
Query: 146 ---------PAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQ 196
D RF++ RVG+G S +EL KL + + PP + +
Sbjct: 195 FQFVVSTTFADCDFSTPRFVALGRVGSGYSLKELYDFNAKLV----QLRLKRGQPPPWLK 250
Query: 197 VTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCL 256
+ E+P+V+I PE+S I+ + + + + S F ++LRFPR+ +R+DK W DC+
Sbjct: 251 L---GVEKPEVYIH-PEQSTIVQVKA-AQIVTSGQFPLGFTLRFPRVQAIRHDKTWRDCM 305
Query: 257 DVQSFVELVH-SSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTD---- 311
V+ F+ S++ T+++ E DD+ ++ K K+ + + +
Sbjct: 306 TVEQFLNFKDLSADCTSKRLAEMKNDNDDQIMNLKTVSKKPKRKAIVAADRRCRVEAMKN 365
Query: 312 ------VSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMNLNNSVTHCVA 365
+ +K + IF +N ++ ++L VVE GGT V H VA
Sbjct: 366 LDQSKRMRKLKPISDIFQGRELCILNGNDTFTKENLEGKVVELGGTV-------VQHPVA 418
Query: 366 ADNKGLKYEAAKRRG--DVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEVDEF 423
+ +K ++ R DV+ SW++ C +Q PK L + + K+ + D++
Sbjct: 419 G-RQTVKVKSVVRASTVDVLKLSWLIRCIQTNSFIQWTPKDMLLTTATMKRHFKRNFDQY 477
Query: 424 SDLYFWDLDLADIKQLL-------SNVDRSEDPKTIDYYKKKYCPQDKWSCFHGCCIYFY 476
D Y +D + LL ++VD S+ K + KY F C IY
Sbjct: 478 GDSYTDPVDSETLHDLLTTVPVEKTDVDDSKSQKFLSTISYKY------GIFLNCTIYLD 531
Query: 477 HSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNLANA-THVVVLSVLGYDVNFNSLTE 535
+ LSP + AL R +L + + + L ++ TH + + + + V L
Sbjct: 532 LYDDLLSPLRRRIALSALDRYELLLYEFRANIVDTLTDSLTHTLCSAFVDF-VQLQRLIL 590
Query: 536 SFTAREKHLL--------------WNKKLHVVRSQWLEDCLAKEQKSEEYEYSLKPTGMQ 581
F+ L+ +N H+V W+ C+ + +E +S++ +G
Sbjct: 591 LFSQSSIKLVDLSRLDDLLRFKSDFNANFHIVTESWVTHCIGEFAIVDESLHSVRTSG-- 648
Query: 582 ESYLELCEEDLDM-------EEPSSTLET 603
ES+ + +E+ E PSS+LET
Sbjct: 649 ESHPAIIDEEEVEEGDDVINENPSSSLET 677
>gi|353235464|emb|CCA67477.1| probable DNA ligase [Piriformospora indica DSM 11827]
Length = 991
Score = 143 bits (360), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 109/399 (27%), Positives = 194/399 (48%), Gaps = 37/399 (9%)
Query: 20 NACNISTVAMNDGICVCVHVYMLSQLRSQIMAADQTGEPCWSLVAHNVDEVEKFFKETIE 79
N +++ +A+ D ++V+ + R QIM A VD V+ + +E
Sbjct: 393 NGRSLTNMALEDRRMNLLNVFSEVEGRLQIMK---------QYDASTVDGVKSLLRRVME 443
Query: 80 NRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQF 138
+R EG++LK S + R W+K+KPEY+ G D+L++GG +G+G+RGG V+ F
Sbjct: 444 DRGEGLILKHPRSPYVLNGRVDHWIKIKPEYMDGQGETFDLLVLGGNFGTGKRGGGVSTF 503
Query: 139 LVALA-ERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQV 197
+ AL +R + + +F R+GTGLS D V+ + KP+ ++ K PP F Q
Sbjct: 504 ICALRDDRSGAPGDGKMWSTFARIGTGLS--FADYVIIRAKPW---TDWGKNGPP-FLQS 557
Query: 198 T--NNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDC 255
N+ ++ D++++ PE + ++++ + ++ + PY+LRFPR R+R + D
Sbjct: 558 APRANTDDKCDLYLK-PEDAFVVTVKA-AEITGTDQYHMPYTLRFPRAVRIRDEFTAEDA 615
Query: 256 LDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTDVSDI 315
V E ++S G +K +E QD P + R++ K+ +++V S F + S
Sbjct: 616 ATVSELFEYINS--GKKRKQEE----QDGGPSKKRNT---GKRKIAVVSSAFQASKDSLT 666
Query: 316 KGETSIFSDMVFYFVNVPPA---YSLDSLHKMVVENGGTF----SMNLNNSVTHCVAADN 368
+ IF+ F + A Y + +++ NGGT + N + + +
Sbjct: 667 TSASDIFAGKTFLVIPAVKATVPYKKADIEQIIRANGGTVRAKRTRRPNEILIYGGSNQP 726
Query: 369 KGLKYEAAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLH 407
+K +++ WVLDC QK+LL + KY H
Sbjct: 727 PDVKAIVRDNTQNIVQPQWVLDCAKQKRLLPFKSKYLYH 765
>gi|345496864|ref|XP_003427838.1| PREDICTED: general transcription factor 3C polypeptide 3-like
isoform 2 [Nasonia vitripennis]
Length = 918
Score = 142 bits (359), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 138/560 (24%), Positives = 244/560 (43%), Gaps = 67/560 (11%)
Query: 38 HVYMLSQLRSQIMAADQTGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPG 97
++ L+ LR + C + +D++ + F ++N +EGIV+K + + P
Sbjct: 386 YIERLAYLRGAFSEKEGVIMLCDTQTVSELDKLVEIFNLALDNEEEGIVVKRSDALYRPN 445
Query: 98 --DRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDT--YP 152
+RSG + K+K EY A +DLD+LI+GGYYG GR G V+ FLV +A +PA + P
Sbjct: 446 VRERSGCY-KIKAEYSDALVNDLDLLILGGYYGQGRCSGTVSSFLVGVA-KPATNKNGMP 503
Query: 153 RRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESP 212
F + V +GLSD++L + KLKP+++ + P + E PDVW+ SP
Sbjct: 504 SEFHAVVSVRSGLSDDQLRIIQNKLKPHWK-----DKKPVGVF---GPRSEPPDVWV-SP 554
Query: 213 EKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTT 272
+ S++L + + +RS+ + YSLRFPR+ ++R DKPW++ F LV +
Sbjct: 555 KHSMVLQLRAS-EMVRSKSYPIGYSLRFPRVMKIRTDKPWYNACSTTEFESLVKNKKFVQ 613
Query: 273 QKGKEYGGLQD---------------DKPKQFRSSRK----GEKKNVSIVPSHFLQTDVS 313
+ K D D PK R ++ + + S+ S D
Sbjct: 614 KLTKRKAETSDITQVVADDEEEEEELDAPK-IRKTKSIPVVTTRVSASVYGSFVKHNDND 672
Query: 314 DIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMNLNNSVTHCVAADNKGLKY 373
+++ + +F +N + K++ ++ N + + D + LK
Sbjct: 673 EVQRTSRLFEGKEICVINGDSEMDRQVIVKLLQQHSAKVVQNASKDTFCLLVGDPETLKA 732
Query: 374 E--AAKRRGDVIHYSWVLDCCSQKKLLQLQ---PKYYLHLSDSSKKKLQEEVDEFSDLYF 428
+ A DV+ W+ Q+ + ++Q P ++ S+++KL + D++ D Y
Sbjct: 733 QNAIASANHDVVSLDWLRRATKQENIGKIQDFRPWELYAMTVSTRRKLDDAYDQYWDNYT 792
Query: 429 WDLDLADIKQLLSNVDRSEDPKTIDYYKKKYCPQDKWSCFHGCCIYFYHSTEPLSPDWEV 488
DLD +K++ ++ S KT D + DK + F T P S V
Sbjct: 793 EDLDEETLKRVTKRIEESSG-KTEDMSVSEMRKLDK--------LLFEEGTSPFSVFRGV 843
Query: 489 L--LGLALRRLKLEISFHGGKVCNNLANATHVVVLSVLGYDVNFNSLTESFTAREKHLLW 546
+ G K +F G+V L F + E+ +
Sbjct: 844 VAFFGNMDDVQKYSFAFMSGEVVGELNETVTFA----------FEPIDETM----RQFCI 889
Query: 547 NKKLHVVRSQWLEDCLAKEQ 566
+ + V+R+QW++DC ++
Sbjct: 890 ERSIPVLRTQWIKDCFKNQR 909
>gi|119478926|ref|XP_001259492.1| DNA ligase, putative [Neosartorya fischeri NRRL 181]
gi|119407646|gb|EAW17595.1| DNA ligase, putative [Neosartorya fischeri NRRL 181]
Length = 1023
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 144/511 (28%), Positives = 235/511 (45%), Gaps = 64/511 (12%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLII 122
A DEVE ++ + EG+VLK+ S + +R W+K+KPEY+ G LD+++I
Sbjct: 471 ATTKDEVEAALRKVVAEASEGLVLKNPRSPYRLNERHDDWMKVKPEYMTEFGESLDLIVI 530
Query: 123 GGYYGSGRRGGEVAQFLVALA---ERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 179
GGYYGSGRRGG ++ FL L + + SFC+VG G + + +
Sbjct: 531 GGYYGSGRRGGNLSSFLCGLRVDDAHASQGASASKCYSFCKVGGGFNAADYANIRHHTDG 590
Query: 180 YFRKYEYPKRAPPSFYQVTNNSK--ERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYS 237
+ ++ PK+ P ++ ++ ERPD+WI+ PE S+++ + + S+ F +
Sbjct: 591 KWMEWN-PKKPPTAYIELAGRDAQYERPDMWIK-PEDSVVICVKA-ASVSASDQFRIGLT 647
Query: 238 LRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEK 297
LRFPR R+R DK W L VQ F++L S+ + KE L D ++ R R +K
Sbjct: 648 LRFPRFKRLRMDKDWRSALSVQEFLDL-KSNAEQEHREKE---LNVDNSRRKRVKRTAKK 703
Query: 298 KNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFV---NVPPAYSLDSLHKMVVENGGTFSM 354
V + + DV IF + FY + + P + L ++V NGG F
Sbjct: 704 P--LTVAGYDMDEDVKYAGPSGHIFDGLNFYILTDSSAPVKKTKPELEQLVKANGGIF-F 760
Query: 355 NLNNSVTHCV-AADNKGLKYEAAKRRGDV--IHYSWVLDCCSQKK--------LLQLQPK 403
NN+ H + AD + +K + ++RGDV I SW+ DC Q + LL +P+
Sbjct: 761 QTNNAAPHTICVADRRTVKAASLQKRGDVDIIRPSWIFDCVKQNEIDAGLPDLLLPFEPR 820
Query: 404 YYLHLSDSSKKKLQEEVDEFSDLYFWD----------------LDLADIKQLL------S 441
+ + ++ VD+F D Y + L AD+ ++L +
Sbjct: 821 HMFFATPGKHDEVASNVDQFGDSYARNTTSEELSDVRFPHNVSLKQADLVKVLKQMTKKN 880
Query: 442 NVDRSEDP----KTIDYYKKKYCPQDKWSC---FHGCCIYFYHSTEPLSPDWEVLLGLAL 494
+D S+ P K I++ +++ + C F I F H E +S ++ A
Sbjct: 881 RLDISQCPESVTKLIEHIQERVNSGHEMPCGLLFKSLTILFPHRNEDVSESESMIPSDAH 940
Query: 495 RRLKLEIS---FHGGKVCNNLANA--THVVV 520
RL+ I+ F G + ++ THVVV
Sbjct: 941 SRLRYAINVARFAGANIAKTSSHPSITHVVV 971
>gi|195173849|ref|XP_002027697.1| GL22420 [Drosophila persimilis]
gi|194114643|gb|EDW36686.1| GL22420 [Drosophila persimilis]
Length = 916
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 119/428 (27%), Positives = 204/428 (47%), Gaps = 28/428 (6%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDR-SGKWLKLKPEYIRAG-SDLDVLIIG 123
+++E K F++ +++ EGIVLK S ++PG R G W K K +YI+ ++ DVLIIG
Sbjct: 418 SIEEFNKLFQQALDSNAEGIVLKKQSSIYQPGVRVGGGWYKDKADYIKGLITEFDVLIIG 477
Query: 124 GYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTK--LKPYF 181
G+Y R+ + FL+ + + P ++ R + +G +++ AVV L+P++
Sbjct: 478 GFYN--RKRTFIDSFLLGVLQ-PMANSDSRHEVY--SIGC-VTNNTRQAVVLNHTLRPHW 531
Query: 182 RKYEYPKRAPPSFYQVTNNSK-ERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRF 240
++ K PP +Y N K PD+WI+ P SIIL + + T S F P +L F
Sbjct: 532 --HDTTKEPPPLWYHYMANEKIGSPDLWID-PHNSIILQVKAADLTPNS-AFYTPKALHF 587
Query: 241 PRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNV 300
PRI+ R DK W++C+ +Q F +L S + K + L D K+ R ++
Sbjct: 588 PRIELKRDDKAWNECMTLQEFNQLCEGSGPIKKLNKRHLCLDDLTTKRKRLRMTPAERRR 647
Query: 301 SIVPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMN--LNN 358
+ + + DV T +F + F ++ P S L ++ +NGG N N+
Sbjct: 648 LGLAIYEKRYDVGTSSSCTKLFEGLSFCILSGAPGQSKHKLQELAAKNGGCIVENPLPND 707
Query: 359 SVTHCVAADNKGLKYEAAKRR---GDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKK 415
C+A D L +++ D++ W++ C Q++ L+L+PK L ++ +
Sbjct: 708 PKCFCIAGDQTFLVKRLMQQQPCTSDIVRMEWLIRVCQQQE-LELRPKDLLSATEPLQDD 766
Query: 416 LQEEVDEFSDLYFWDLDLAD-IKQLLSNVDRSE------DPKTIDYYKKKYCPQDKWSCF 468
L E D+ D Y D D + +LL ++ + E I+ ++ K Q + F
Sbjct: 767 LAEWFDKLGDSYTKDFASVDELLELLQDIGKEELAVDHVSQSEINAFEDKLLGQATRNIF 826
Query: 469 HGCCIYFY 476
YFY
Sbjct: 827 RDLHAYFY 834
>gi|390600153|gb|EIN09548.1| ATP-dependent DNA ligase [Punctularia strigosozonata HHB-11173 SS5]
Length = 985
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 105/374 (28%), Positives = 181/374 (48%), Gaps = 47/374 (12%)
Query: 69 EVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIGGYYG 127
+V +E +ENR EG+++K S++ R+ W+K+KPEY+ G +DVL++ G YG
Sbjct: 432 DVRTRMEEVMENRGEGLIIKHPDSEYVLNGRNKDWIKVKPEYMDNMGETVDVLVVAGNYG 491
Query: 128 SGRRGGEVAQFLVALAE---RPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKY 184
+G RGG V+ + A+ + RP D P ++ S R+G+GLS D V + KP+
Sbjct: 492 TGHRGGGVSTLVCAVLDDRRRPEEDDEP-KYASVVRIGSGLS--FADYVWIRSKPW---K 545
Query: 185 EYPKRAPPSFYQVT-NNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRI 243
+ +R PPSFY ++++ DV++E PE S I+ + + + S+++ +++RFPR
Sbjct: 546 IWAERNPPSFYLTAPKGTEDKGDVYLE-PEDSFIIKVKA-AEIVTSDLYYLGFTMRFPRA 603
Query: 244 DRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIV 303
+R D DC+ F L S +K +E + K EKK +
Sbjct: 604 VNIRDDLSVADCMTATEF--LAEMSESKKRKVEE-------------ETVKPEKKRKTAS 648
Query: 304 PSHFLQ------TDVSDIKGETSIFSDMVFYFVNVPPAYSLDS----LHKMVVENGGTFS 353
H L + + D+ E+ +F M F V+ P + + D L K++ NGG +
Sbjct: 649 KVHVLSEYGMGGSRLKDVAVESVLFRGMRFMVVSDPKSRTGDEDKRDLMKLIHANGGKVA 708
Query: 354 MNLNNSVTHCVAADNKGLKYE----AAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLS 409
++ V + Y+ K D+I W+ DC SQ +++ + KY+ H +
Sbjct: 709 QVVSKKFPTLVVYGGSTIPYDIRLIMQKDEADIIKPQWIFDCLSQSEVIPMTKKYFFHAT 768
Query: 410 DSSKKKLQEEVDEF 423
++E DE+
Sbjct: 769 SR-----RQETDEY 777
>gi|336469513|gb|EGO57675.1| DNA ligase 4 [Neurospora tetrasperma FGSC 2508]
gi|350290843|gb|EGZ72057.1| DNA ligase 4 [Neurospora tetrasperma FGSC 2509]
Length = 1046
Score = 140 bits (352), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 140/582 (24%), Positives = 262/582 (45%), Gaps = 85/582 (14%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIR-AGSDLDVLII 122
A + D +E + + EG+VLK+ S++ R+ W+K+KPEY+ G LD +++
Sbjct: 475 ATSPDAIEPLLRRVVAEASEGLVLKNPRSRYSLNSRNNDWIKVKPEYMSDFGESLDCVVV 534
Query: 123 GGYYGSGRRGGEVAQFLVALAER----PAPDTYPRRFISFCRVGTGLSDEELDAVVTKLK 178
GGY+GSGRRGG ++ FL + + + + +SF +VG G E+ + +
Sbjct: 535 GGYFGSGRRGGTLSSFLCGVRVSQNFIKSGNASAEKCLSFVKVGGGFKAEDYAEIRHHTE 594
Query: 179 PYFRKYEYPKRAPPSFYQVTNNSK---ERPDVWIESPEKSIILSITSDIRTIRSEVFSAP 235
++ ++ P P + ++ K E+PDVWI P S+++S+ + T +S+ F+
Sbjct: 595 GKWQDWD-PSSPPTEYIELGGGEKLQYEKPDVWIR-PSDSVVISVKAASIT-QSDQFAMG 651
Query: 236 YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKG 295
++LRFPR ++R D+ W LD+ F E++ S ++ ++ +++ K K + K
Sbjct: 652 WTLRFPRFRKLRLDRAWDSALDMDEF-EVLRSKIKDQEQERKKMEMENRKRK---PATKR 707
Query: 296 EKKNVSIV----PSHFLQTDVSDIKGETSIFSDMVFYFVNV--------PPAYSLDSLHK 343
+K++ I PS ET S+ +F ++ P + +L K
Sbjct: 708 ARKDLVIAGMSDPSSSSAATPVIAPRETREASERLFEGLDFCVLSDSLKPNKMAKPALEK 767
Query: 344 MVVENGGTFSMNLNNSVTH---CVAADNKGLKYEAAKRRG----DVIHYSWVLDCCSQ-- 394
++ ++GG + + + +K + A+ R+ D++ W+ DC Q
Sbjct: 768 LIKDHGGRIHQQVVDHSGQGKIIIPIADKNVIKVASLRKANPEMDIVRPKWIFDCLVQPI 827
Query: 395 --------KK--LLQLQPKYYLHL-SDSSKKKLQEEVDEFSDLYFWDLDLADIKQL---- 439
KK LL +P + H S+ + ++ ++ VD + D Y DL ADI +L
Sbjct: 828 LFTKQKENKKGYLLLFEPTHLFHSGSEETSEEAEQAVDRYGDSYAGDL--ADINELKAIM 885
Query: 440 --------LSNVDRSEDPKT-------------IDYYKKKYCPQDKWSCF--HGCCIYFY 476
+S+ D DP +D+ +++ D+ F C ++F
Sbjct: 886 EGMESDDYVSDSDWDSDPGRGRGRGDGFDMDHFLDHLEEQGTSLDELRSFMFRRCRVFF- 944
Query: 477 HSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNLANATHVVVLSVLGYDVNFNSLTES 536
P + + + RLK I F GKV + L ATHVVV++ + + E
Sbjct: 945 --ALPSAGNGDGAAESKASRLKNYIRFGNGKVVDELETATHVVVVTAPSGESSKKEGRE- 1001
Query: 537 FTAREKHLLWNKKL-----HVVRSQWLEDCLAKEQKSEEYEY 573
A ++ + +++ +V+ +W+ED + +E EY
Sbjct: 1002 MAAEIRYKISLREMGSPMPRIVKGEWVEDSWKEATVVDEEEY 1043
>gi|198467247|ref|XP_001354322.2| GA11455 [Drosophila pseudoobscura pseudoobscura]
gi|198149409|gb|EAL31375.2| GA11455 [Drosophila pseudoobscura pseudoobscura]
Length = 916
Score = 140 bits (352), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 119/428 (27%), Positives = 204/428 (47%), Gaps = 28/428 (6%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDR-SGKWLKLKPEYIRAG-SDLDVLIIG 123
+++E K F++ +++ EGIVLK S ++PG R G W K K +YI+ ++ DVLIIG
Sbjct: 418 SIEEFNKLFQQALDSNAEGIVLKKQSSIYQPGVRVGGGWYKDKADYIKGLITEFDVLIIG 477
Query: 124 GYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTK--LKPYF 181
G+Y R+ + FL+ + + P ++ R + +G +++ AVV L+P++
Sbjct: 478 GFYN--RKRTFIDSFLLGVLQ-PMANSDSRHEVY--SIGC-VTNNTRQAVVLNHTLRPHW 531
Query: 182 RKYEYPKRAPPSFYQVTNNSK-ERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRF 240
++ K PP +Y N K PD+WI+ P SIIL + + T S F P +L F
Sbjct: 532 --HDTTKEPPPLWYHYMANEKIGSPDLWID-PHNSIILQVKAADLTPNS-AFYTPKALHF 587
Query: 241 PRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNV 300
PRI+ R DK W++C+ +Q F +L S + K + L D K+ R ++
Sbjct: 588 PRIELKRDDKAWNECMTLQEFNQLCEGSGPIKKLNKRHLCLDDLTTKRKRLRMTPAERRR 647
Query: 301 SIVPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMN--LNN 358
+ + + DV T +F + F ++ P S L ++ +NGG N N+
Sbjct: 648 LGLAIYEKRYDVGTSSSCTKLFEGLSFCILSGAPGQSKHKLQELAAKNGGCIVENPLPND 707
Query: 359 SVTHCVAADNKGLKYEAAKRR---GDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKK 415
C+A D L +++ D++ W++ C Q++ L+L+PK L ++ +
Sbjct: 708 PKCFCIAGDQTFLVKRLMQQQPCTSDIVRMEWLIRVC-QEQELELRPKDLLSATEPLQDD 766
Query: 416 LQEEVDEFSDLYFWDLDLAD-IKQLLSNVDRSE------DPKTIDYYKKKYCPQDKWSCF 468
L E D+ D Y D D + +LL ++ + E I+ ++ K Q + F
Sbjct: 767 LAEWFDKLGDSYTKDFASVDELLELLQDIGKEELAVNHVSQSEINAFEDKLLGQATRNIF 826
Query: 469 HGCCIYFY 476
YFY
Sbjct: 827 RDLHAYFY 834
>gi|346324665|gb|EGX94262.1| DNA ligase, putative [Cordyceps militaris CM01]
Length = 1001
Score = 139 bits (350), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 145/555 (26%), Positives = 253/555 (45%), Gaps = 72/555 (12%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLII 122
A + D +E ++ + + EG+VLK+ S + R+ WLK+KPEY+ G LD L+I
Sbjct: 476 ATSPDAIEPLLRDVVASASEGLVLKNPRSMYRLNSRNDDWLKVKPEYMSEFGESLDCLVI 535
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTY-----PRRFISFCRVGTGLSDEELDAVVTKL 177
GGYYGSG+RGG ++ +L L R +P+ P + SF +VG G E+ + +
Sbjct: 536 GGYYGSGKRGGTLSSYLCGL--RASPNQVQAGADPEKCFSFFKVGGGFRAEDYAEIRHRT 593
Query: 178 KPYFRKYEYPKRAPPS-FYQVTNNSK---ERPDVWIESPEKSIILSITSDIRTIRSEVFS 233
+ + ++ R PPS F ++ ERPDVWI P+ SI++S+ + S+ F+
Sbjct: 594 EGKW--IDWDARHPPSQFIELGGGEAKQLERPDVWIR-PKDSIVVSVKA-ASVGPSDSFA 649
Query: 234 APYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSR 293
Y+LRFPR R+R D+ W L V F L ++ ++ K+ +DK K+ R+ +
Sbjct: 650 RGYTLRFPRFRRLRLDRAWDSALSVDEFQSLKQHAD---EESKDKAMTMEDK-KRGRNPK 705
Query: 294 KGEKKNVSIVPSHF------LQTDVSDIKGETSIFSDMVFYFVN---VPPAYSLDSLHKM 344
+ K+ + IV LQT + T +F + F ++ P + L +
Sbjct: 706 R-VKRELVIVGGESTKGPLPLQTTRT-----TGLFDGIEFCVLSESLKPFKRTKAELEVI 759
Query: 345 VVENGGTFSMNLNNSVTHCVAADNKGLKYEAAKRRG--DVIHYSWVLDCCSQKK------ 396
+ ENGGT S + + AD K +K + ++G D+I W+ DC +Q +
Sbjct: 760 IKENGGTVSQRAAPATAMVLIADKKVVKVASLMKQGAVDIIRPRWIQDCLTQLQADTEAG 819
Query: 397 ----LLQLQPKYYLHLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSN---VDRSEDP 449
LL + + H +D+ K + D++ D Y DL L +++ L+ + ++ E P
Sbjct: 820 AGLFLLPYEEVHLFHATDALKHVAAQNTDQYGDSYARDLPLEELRALMRDMPKIESGEGP 879
Query: 450 -------KTIDYYKKKYCPQDKWSCFHGCCIYFYHSTEPLSPDWEVLLGLALRRLKLEIS 502
+ + Q + F C ++ + ++ + + RL +
Sbjct: 880 FDKRGFLDELADRGRDLSAQLRSMMFQRCVVHVHRASAGDAGE-----EAEAERLARYVR 934
Query: 503 FHGGKVCNNLAN--ATHVVVLSVLGYDVNFNSLTESFTAREKHLLWNKKLHVVRSQWLED 560
+ GG + L + THVV+ +S + R + K +VR W+E
Sbjct: 935 YGGGVCVDGLESEGLTHVVLAR--------DSQDTAEELRRELSTRPKLPRLVRGSWIET 986
Query: 561 CLAKEQKSEEYEYSL 575
C + +E +YS+
Sbjct: 987 CWKERSLVDEEQYSV 1001
>gi|85109337|ref|XP_962868.1| hypothetical protein NCU06264 [Neurospora crassa OR74A]
gi|74617328|sp|Q7SB49.1|DNLI4_NEUCR RecName: Full=DNA ligase 4; AltName: Full=DNA ligase IV; AltName:
Full=DNA repair and recombination protein mus-53;
AltName: Full=Polydeoxyribonucleotide synthase [ATP] 4
gi|28924508|gb|EAA33632.1| hypothetical protein NCU06264 [Neurospora crassa OR74A]
gi|115635893|dbj|BAF34364.1| DNA repair and recombination protein MUS53 [Neurospora crassa]
Length = 1046
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 139/587 (23%), Positives = 260/587 (44%), Gaps = 95/587 (16%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIR-AGSDLDVLII 122
A + D +E + + EG+VLK+ S++ R+ W+K+KPEY+ G LD +++
Sbjct: 475 ATSPDAIEPLLRRVVAEASEGLVLKNPRSRYSLNSRNNDWIKVKPEYMSDFGESLDCVVV 534
Query: 123 GGYYGSGRRGGEVAQFLVALAER----PAPDTYPRRFISFCRVGTGLSDEELDAVVTKLK 178
GGY+GSGRRGG ++ FL + + + + +SF +VG G E+ + +
Sbjct: 535 GGYFGSGRRGGTLSSFLCGVRVSQNFIKSGNASAEKCLSFVKVGGGFKAEDYAEIRHHTE 594
Query: 179 PYFRKYEYPKRAPPSFYQVTNNSK---ERPDVWIESPEKSIILSITSDIRTIRSEVFSAP 235
++ ++ P P + ++ K E+PDVWI P S+++S+ + T +S+ F+
Sbjct: 595 GKWQDWD-PSSPPTEYIELGGGEKLQYEKPDVWIR-PSDSVVISVKAASIT-QSDQFAMG 651
Query: 236 YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKG 295
++LRFPR ++R D+ W LD+ F E++ S ++ ++ +++ K K + K
Sbjct: 652 WTLRFPRFRKLRLDRAWDSALDMDEF-EVLRSKIKDQEQERKKMEMENRKRK---PATKR 707
Query: 296 EKKNVSIV----PSHFLQTDVSDIKGETSIFSDMVFYFVNV--------PPAYSLDSLHK 343
+K++ I PS ET S +F ++ P + +L K
Sbjct: 708 ARKDLVIAGMSDPSSSSAATPVIAPKETREASKRLFEGLDFCVLSDSLKPNKMTKPALEK 767
Query: 344 MVVENGGTFS---MNLNNSVTHCVAADNKGLKYEAAKRRG----DVIHYSWVLDCCSQ-- 394
++ ++GG M+ + + +K + A+ R+ D+I W+ DC Q
Sbjct: 768 LIKDHGGRIHQQVMDHSGQGKIIIPIADKNVIKVASLRKANPEMDIIRPKWIFDCLVQPM 827
Query: 395 --------KK--LLQLQPKYYLHL-SDSSKKKLQEEVDEFSDLYFWDL-DLADIKQLLSN 442
KK LL +P + H S+ + ++ ++ VD+F D Y DL D+ ++K ++
Sbjct: 828 PFTKQKENKKGYLLPFEPTHLFHSGSEETSEEAEQAVDKFGDSYAGDLADINELKAIMEG 887
Query: 443 VDRSEDPKT----------------------IDYYKKKYCPQD--KWSCFHGCCIYFYHS 478
++ + +D+ +++ D + F C ++F
Sbjct: 888 MESDDYVSDSDWDSDSGRGRGGGDGFDMNHFLDHLEEQGTSLDDLRSFMFRRCRVFF--- 944
Query: 479 TEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNLANATHVVVLSVLGYDVNFNSLTESFT 538
P + + + RLK I F GKV + L ATHVVV++ L ES
Sbjct: 945 ALPSAGNGDGAAESKALRLKNYIRFGNGKVVDELETATHVVVVTA--------PLGESSK 996
Query: 539 AREKHL------------LWNKKLHVVRSQWLEDCLAKEQKSEEYEY 573
E+ + + + +V+ +W+ED + +E EY
Sbjct: 997 KEEREIAAELRYKISLREMGSPMPRIVKGEWVEDSWKEGTVVDEEEY 1043
>gi|302891895|ref|XP_003044829.1| hypothetical protein NECHADRAFT_43928 [Nectria haematococca mpVI
77-13-4]
gi|256725754|gb|EEU39116.1| hypothetical protein NECHADRAFT_43928 [Nectria haematococca mpVI
77-13-4]
Length = 991
Score = 139 bits (349), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 139/527 (26%), Positives = 237/527 (44%), Gaps = 57/527 (10%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLII 122
A D +E +E + N EG+VLK+ S + R+ WLK+KPEY+ G LD +II
Sbjct: 478 ATTSDAIEPLLREVVANASEGLVLKNPRSMYRLNHRNDDWLKVKPEYMSEFGESLDCVII 537
Query: 123 GGYYGSGRRGGEVAQFLVAL---AERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 179
GGYYGSG+RGG ++ +L L P + SF +VG G E+ + + +
Sbjct: 538 GGYYGSGKRGGMLSSYLCGLRVTQNHIQAGANPEKCFSFFKVGGGFRAEDYAEIRHRTEG 597
Query: 180 YFRKYEYPKRAPPSFYQVTNNSK----ERPDVWIESPEKSIILSITSDIRTIRSEVFSAP 235
+ E+ ++ PPS Y + ERPD+WI K ++ S+ F+
Sbjct: 598 KW--IEWDQKNPPSEYIELGGGELRQYERPDMWIRP--KDSVVVSVKAASVGPSDQFARG 653
Query: 236 YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKG 295
++LRFPR R+R D+ W L ++ F EL + ++ KE +D+ R + K
Sbjct: 654 FTLRFPRFRRLRLDRTWDTALSLEEFQEL---KDRVDEESKEKAMTVEDRK---RRNPKR 707
Query: 296 EKKNVSIVPSHFLQTDVSDIKGE-TSIFSDMVFYFVN---VPPAYSLDSLHKMVVENGGT 351
K+ + I + + +GE T +F + F ++ P + L ++ ENGGT
Sbjct: 708 IKRELVIAGE---DSAPVEFEGEKTKLFEGLEFCVLSEALKPYKKTKTQLESIIKENGGT 764
Query: 352 FSMNLNNSVTHCVAADNKGLKYEAAKRRGDV--IHYSWVLDCCSQ---KKLLQLQPKYYL 406
S + AD K +K + + GDV I W+ DC Q + LL + +
Sbjct: 765 ISQRAAPGTNMVLIADKKVVKVASLMKGGDVDLIRPKWIKDCLEQDLGQFLLPFEESHLF 824
Query: 407 HLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNVDRSEDPKTIDYYKKKYCPQ---- 462
H +++ K+ ++ D+F D Y D+ + ++K L+ + + ED + + K ++ Q
Sbjct: 825 HATEAMKRAAEQNTDQFGDSYARDMSIDELKDLMDCMPKIEDGEP--FNKNEFLQQLEDH 882
Query: 463 -----DKWSCFHGCCIYFYHSTEPLSPDWEVLLGL-ALRRLKLEISFHGGKVCNNLAN-- 514
+ S C+ +H + G+ + RLK + + GG V + +
Sbjct: 883 GKDLGNLRSFIFRRCVVLFHGVDT---------GINRVSRLKHFVKYGGGSVTEDAGDLS 933
Query: 515 ATHVVVLSVLGYDVNFNSLTESFTAREKHLLWNKKLHVVRSQWLEDC 561
THVV+ G + + R++ + VV +W+EDC
Sbjct: 934 VTHVVIEG--GDPMQMGEAAD--MVRKELSSRRTQPRVVAGKWIEDC 976
>gi|449301934|gb|EMC97943.1| hypothetical protein BAUCODRAFT_120861 [Baudoinia compniacensis
UAMH 10762]
Length = 976
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 110/413 (26%), Positives = 193/413 (46%), Gaps = 32/413 (7%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLII 122
A ++E + + EG+VLK+ S++ +R+ W+K+KPEY+ G +LD ++I
Sbjct: 455 ATKASDIEPHLRRVVAEASEGLVLKNPRSRYRLNERNDDWIKVKPEYMTEFGEELDCVVI 514
Query: 123 GGYYGSGRRGGEVAQFLVAL-----AERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
GGYYGSG RGG ++ F+ L + T P++ SF +VG G S + V +
Sbjct: 515 GGYYGSGHRGGRLSSFMCGLRVDDDIRASSQGTNPQKCYSFFKVGGGFSASDYAEVRHQT 574
Query: 178 KPYFRKYEYPKRAPPSFYQVTNNSK---ERPDVWIESPEKSIILSITSDIRTIRSEVFSA 234
+ + ++ K P + ++ + E+PDVWI+ PE SI+LS+ + T ++ F
Sbjct: 575 EGKWIDWD-AKNPPKEWIELGGGWERQFEKPDVWIK-PEDSIVLSVKAASVTT-TDQFRT 631
Query: 235 PYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRK 294
+LRFPR ++R DK W L V F L T+K ++ + D R
Sbjct: 632 LVTLRFPRFKKIRTDKDWKSALSVHEFNSL--KQRAETEKHEKQFKIDD----ARRKRTS 685
Query: 295 GEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFVN---VPPAYSLDSLHKMVVENGGT 351
++K +V T +F + F+ ++ P S L +++ NGG
Sbjct: 686 RKRKRGLVVQGQDEHVTTPYAGPATKVFEGLSFFVLSEALKPQKSSKADLEQLIKANGGN 745
Query: 352 FSMNLNNSVTHCVAADNKGLKYEAAKRRG--DVIHYSWVLDCCSQKKLLQLQPKYYLHLS 409
+ +S T V AD +K + ++R +++ W+ DC Q +LL +P++ +
Sbjct: 746 VVASEKDSKTLLV-ADRNLVKVASLQKRDERNIVRPCWLFDCIKQGELLPFEPQHLFYTI 804
Query: 410 DSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNV--------DRSEDPKTIDY 454
+ K + VDE+ D Y D ++ L + + D + D K++ Y
Sbjct: 805 STDAGKFDDAVDEYGDSYARDATPDELLTLFNRMPSRSIAANDSATDNKSVAY 857
>gi|398408189|ref|XP_003855560.1| hypothetical protein MYCGRDRAFT_68344 [Zymoseptoria tritici IPO323]
gi|339475444|gb|EGP90536.1| hypothetical protein MYCGRDRAFT_68344 [Zymoseptoria tritici IPO323]
Length = 964
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 128/508 (25%), Positives = 225/508 (44%), Gaps = 57/508 (11%)
Query: 45 LRSQIMAADQTGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWL 104
L + + DQ E A E+E ++ + EG+VLK+ S++ +R+ W+
Sbjct: 436 LLKSVTSIDQRMEIHEHQKATQASEIEPVLRKVVAEASEGLVLKNPRSEYRLNERNDDWI 495
Query: 105 KLKPEYI-RAGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPA------PDTYPRRFIS 157
K+KPEY+ G LD +++GGYYGSG+RGG ++ FL L + A + P+ +S
Sbjct: 496 KVKPEYMTEFGESLDCIVVGGYYGSGKRGGGLSSFLCGLKPQQAIFSSQNRNINPQMVLS 555
Query: 158 FCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSK---ERPDVWIESPEK 214
F +VG G + + + + + + + K PP+ + V E+PDVWI+ PE
Sbjct: 556 FFKVGGGFAASDYAEIRHRTEGKWTDWNAKK--PPTDWVVLGGGDRQFEKPDVWIK-PED 612
Query: 215 SIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQK 274
SI+LS+ + T ++ F+ +LRFPR ++R DK W L F L ++
Sbjct: 613 SIVLSVKAASVTGTTQ-FATGCTLRFPRFKKLRTDKDWTQALTQDEFNALRKRVEAEVEE 671
Query: 275 GKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFVNVPP 334
K DD KQ ++ KK ++ T +F + F+ + P
Sbjct: 672 KKMK---IDDTRKQKVGPKR--KKRELVIQGQEDAVRAPYAGPATKVFEGLSFFVMTEAP 726
Query: 335 ---AYSLDSLHKMVVENGGTFSMNLNNSVTHCVAADNKGLKYEAAKR--RGDVIHYSWVL 389
+ L +++ NGG + + T + AD +K + + + +I SW+L
Sbjct: 727 KPLKKTKAELEQLIKANGGNVVASEKDPDT-IIIADRNMVKVASISKHDKRSIIRPSWLL 785
Query: 390 DCCSQKK--------LLQLQPKYYLHLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLS 441
DC Q + LL L+ + H + + + + + VDE+ D Y D+ ++ L +
Sbjct: 786 DCVRQSEIDIGRPALLLPLEKFHLFHTASAEQGRFDDNVDEYGDSYARDITTEELLALCN 845
Query: 442 NV-DRSEDPKTIDYYKKKYCPQD------KWSCFHGCCIYFYHSTEPLSPDWEVLLGLAL 494
+ + ED D +++ K F G YF + + A+
Sbjct: 846 AMPSKMEDGLNPDEVLEQFHDHGHELDAMKGFMFRGTTAYF-----------DDVPAEAI 894
Query: 495 RRLKLEISFHGGKVCNNLAN--ATHVVV 520
R K F GG++ +++ + THVV+
Sbjct: 895 RLFK----FAGGQIADSIEDDQLTHVVL 918
>gi|429238722|ref|NP_587888.2| DNA ligase Lig4 [Schizosaccharomyces pombe 972h-]
gi|395398610|sp|O74833.3|DNLI4_SCHPO RecName: Full=DNA ligase 4; AltName: Full=DNA ligase IV; AltName:
Full=Polydeoxyribonucleotide synthase [ATP] 4
gi|347834433|emb|CAA21085.3| DNA ligase Lig4 [Schizosaccharomyces pombe]
Length = 913
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 107/393 (27%), Positives = 191/393 (48%), Gaps = 42/393 (10%)
Query: 63 VAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLI 121
V ++++E + I+ EG+V+K + G+R W+K+KP Y++ G DLD LI
Sbjct: 418 VGSTIEDIEAELRNVIQEGSEGLVIKKPSGSYHLGERMDDWIKVKPYYLQGFGEDLDCLI 477
Query: 122 IGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYF 181
+GGY+G G++ G++ FL L P + +F SF RVG G + + D + + + +
Sbjct: 478 LGGYFGRGKQSGKINSFLCGLRMDYTPKDHSEKFQSFVRVGGGFTYFDRDIIRKETEGKW 537
Query: 182 RKY-----EYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPY 236
+ EY + A T E+PD+WI P+ S++L I + + S F Y
Sbjct: 538 LPWSSDALEYMELAG------TKQDFEKPDMWIH-PKDSLVLQIKA-AEVVVSNRFKTNY 589
Query: 237 SLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGE 296
+LRFPR+++VR D+ W D L + F L ++ + ++ +K ++ R+ +
Sbjct: 590 TLRFPRLEKVRLDRSWKDALTINEFFTLKNAV-----EKQDNVSFHVNKKRKVSQKREKQ 644
Query: 297 KKNVSIVPSHFLQTDVSDIKGETSIFSDMV--FYFVNVPPAYSLDS---LHKMVVENGGT 351
KK + P+ K E S SD++ +FV +PP ++ L ++++ENGG
Sbjct: 645 KKFLYDEPT---------FKKEASPHSDVLKNLHFVVLPPTELHETKAGLQQIIIENGGL 695
Query: 352 FSMNLNNSVTH--CVAAD--NKGLKYEAAKRRGDVIHYSWVLDCCSQKKLLQLQPKY-YL 406
+ N + AD + + E +K +I WV+D + ++L+ P++ YL
Sbjct: 696 IHQGVGNFGKERLFLVADRVSTRVSIERSKNMCTIIRSQWVMDSVNNQRLM---PQWSYL 752
Query: 407 HLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQL 439
S K + ++ S +L L ++KQL
Sbjct: 753 LFSKDEKYSWKTALESLSAKSLSNL-LVELKQL 784
>gi|453088030|gb|EMF16071.1| DNA ligase 4 [Mycosphaerella populorum SO2202]
Length = 859
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 126/483 (26%), Positives = 222/483 (45%), Gaps = 56/483 (11%)
Query: 69 EVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIGGYYG 127
+VE ++ + EG+V+K+ S++ +R+ W+K+KPEY+ G LD +++GGY+G
Sbjct: 355 DVELELRQAVAEASEGLVMKNPRSEYRLNERNDDWIKVKPEYMTEFGESLDCIVVGGYFG 414
Query: 128 SGRRGGEVAQFLVAL----AERPA--PDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYF 181
SG+RGG + FL L A R P +P++ SF +VG G S + + + +
Sbjct: 415 SGKRGGHHSSFLCGLYLPSAWRAGLEPHAHPQKTWSFFKVGGGFSASDYAQIRHETDGKW 474
Query: 182 RKYEYPKRAPPSFYQVTNNSK--ERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLR 239
+ ++ K+ P + ++ + E+PD WI+ PE S+++S+ + +S+ F ++LR
Sbjct: 475 KDWDR-KKPPTEWIELGGGDRQHEKPDQWIK-PEDSVVVSVKAASVE-QSDQFRTKFTLR 531
Query: 240 FPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKN 299
FPR ++R DK W L F+ L +++ K L+ D+ ++ R++++ +K
Sbjct: 532 FPRFKKLRTDKSWAQALSYDEFMTLKYNAEDQQHDKK----LKVDESRKQRTTKR--QKR 585
Query: 300 VSIVPSHFLQTDVSDIKGETSIFSDMVFYFV---NVPPAYSLDSLHKMVVENGGTFSMNL 356
++ T + T +F + F + P S L +MV NGG
Sbjct: 586 ELVIQGQECDTQTAYAGPATQVFEGLAFCIMTEAGKPLKKSKAELEQMVKANGGQIVAAP 645
Query: 357 NNSVTHCVAADNKGLKYEAAKRRG--DVIHYSWVLDCCSQKK--------LLQLQPKYYL 406
N+ T + AD ++ + K+ ++I W+LDC Q + LL L+P +
Sbjct: 646 NDPDT-ILIADRNLVRVASIKKNNNRNIIRPCWLLDCIKQSELDAGRPAHLLPLEPHHLE 704
Query: 407 HLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNV-----DRSEDPKTIDYYKKKYCP 461
+ + K + VDEF D Y D+ D+ L + D E + + +
Sbjct: 705 FTHTADEGKFDDNVDEFGDSYARDVTAQDLLALFKEMPTKLEDDFEPSGVLQQFNEHGHG 764
Query: 462 QDKWSC--FHGCCIYFYHSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNLA--NATH 517
D + F G I F+ P + K SF GG + ++L N TH
Sbjct: 765 LDAVTALMFFG-TIAFFEDARPET--------------KRIYSFAGGMIADSLQERNLTH 809
Query: 518 VVV 520
VVV
Sbjct: 810 VVV 812
>gi|195393254|ref|XP_002055269.1| GJ19276 [Drosophila virilis]
gi|194149779|gb|EDW65470.1| GJ19276 [Drosophila virilis]
Length = 992
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 114/427 (26%), Positives = 200/427 (46%), Gaps = 29/427 (6%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDR-SGKWLKLKPEYIRAG-SDLDVLIIG 123
+++ F++ +++ EGIVLK S ++PG R G W K K +YI ++ DVLIIG
Sbjct: 422 SLEHFNTLFQQMLDSNAEGIVLKKQNSIYKPGVRVGGGWYKDKADYIEGLITEFDVLIIG 481
Query: 124 GYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRK 183
G+Y R+ + FL+ + +P +T S V + + + +L+P++
Sbjct: 482 GFYN--RKRTFIESFLLGVL-KPGGETERDEVYSIGCVAN--NTRQRTVLHHELRPHW-- 534
Query: 184 YEYPKRAPPSFYQVTNNSKE-RPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
++ PP +Y N KE PDVWI+ PEKS+IL + + T F P SL FPR
Sbjct: 535 HDASTEPPPLWYHYKPNEKEGSPDVWIQ-PEKSVILQVKAADLTPNG-AFYTPKSLHFPR 592
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSI 302
+R DK W++C+ +Q + EL + K L D ++ R ++N
Sbjct: 593 TQLLRDDKVWNECMTLQEYTELCQGQGAIKKLNKRQANLNDFTTERKRIKLTTAERNRLG 652
Query: 303 VPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMN--LNNSV 360
+ ++ + DV + + +F F ++ YS L + ENGGT N N+
Sbjct: 653 LAAYEKRYDVQPLANSSQLFEGFSFCILSGTRGYSKQQLQTLAAENGGTIVQNPLPNDPK 712
Query: 361 THCVAADNKGLK---YEAAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQ 417
C+A D L + R D++ W+L SQK+ ++L+P+ L +D+ + +
Sbjct: 713 CICIAGDLVYLVERLMQQQPRCNDILRLDWLLR-VSQKQQIELRPRDVLSATDALQTQFD 771
Query: 418 EEVDEFSDLYFWDL--DLADIKQLLSNVDRSE------DPKTIDYYKKKYCPQDKWSCF- 468
+ D+ D F DL L +++++L ++ + D +D +++ ++ F
Sbjct: 772 KSFDKLGD-SFTDLFGSLNELQEVLLDISEVQLDSVHVDEHDLDKLEQQLLGTASYNIFA 830
Query: 469 -HGCCIY 474
H C Y
Sbjct: 831 KHHACFY 837
>gi|347839336|emb|CCD53908.1| similar to DNA ligase [Botryotinia fuckeliana]
Length = 1024
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 117/458 (25%), Positives = 209/458 (45%), Gaps = 58/458 (12%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLII 122
A + E++ ++ + EG+VLK+ S + R+ W+K+KPEY+ G LD +II
Sbjct: 484 AKSASEIDPALRKIVAEGSEGLVLKNPQSMYRLNSRNDDWMKVKPEYMTGFGESLDCIII 543
Query: 123 GGYYGSGRRGGEVAQFLVAL--------AERPAP-------------DTYPRRFISFCRV 161
GGYYGSG RGG ++ FL L AP P + SF +V
Sbjct: 544 GGYYGSGHRGGNLSSFLCGLRVNEKQIKTGMIAPPFTIGKQNLNHKTGANPMKCFSFFKV 603
Query: 162 GTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQV--TNNSKERPDVWIESPEKSIILS 219
G G + ++ + + + K++ K P F ++ ++ +ERPDVWI++ E SI++
Sbjct: 604 GGGFNTDDYATIRHQTDGKWHKWDI-KSPPTEFIELAGSHQERERPDVWIKADE-SIVVE 661
Query: 220 ITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYG 279
+ + I S+ F Y+LRFPR R+R DK W L ++ F+EL ++GKE
Sbjct: 662 VKAASVGI-SDSFRTNYTLRFPRFKRLRPDKDWKSALSIEEFMEL----KAKVEEGKE-D 715
Query: 280 GLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFVNV---PPAY 336
+ DK K R S++ +++ + +T+ + T +F + F ++ P
Sbjct: 716 EFRVDKKK--RGSKRVKRERIIAGTEDVGKTEYAG--PNTDVFKGLNFCVLSEMIHPSKK 771
Query: 337 SLDSLHKMVVENGGTFSMNLNNSVTHCVAADNKGLKYEAA--KRRGDVIHYSWVLDCCSQ 394
S + K++ ENGG+ + + V AD + +K A ++ ++ WV+ +Q
Sbjct: 772 SKVEVEKLIKENGGSIYQSPASKEDIIVIADKRVVKVAALMNAKKTSIVKPQWVIHAIAQ 831
Query: 395 KK-----------LLQLQPKYYLHLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNV 443
++ ++ + + L+ + ++++ DE D Y D+ + K ++ ++
Sbjct: 832 RESDAAQGRTSRFIIPFEMIHMLYCREEDTEEIEANSDEHGDPYCRDVGPLEYKGIIESM 891
Query: 444 DRSEDPKTIDYYKKKYCPQD------KWSCFHGCCIYF 475
R E Y + Q K S F GC F
Sbjct: 892 ARVEGKTLTKYLQDMLVKQGVDMTEFKGSMFWGCKAIF 929
>gi|154303118|ref|XP_001551967.1| hypothetical protein BC1G_09579 [Botryotinia fuckeliana B05.10]
Length = 1130
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 117/458 (25%), Positives = 209/458 (45%), Gaps = 58/458 (12%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLII 122
A + E++ ++ + EG+VLK+ S + R+ W+K+KPEY+ G LD +II
Sbjct: 590 AKSASEIDPALRKIVAEGSEGLVLKNPQSMYRLNSRNDDWMKVKPEYMTGFGESLDCIII 649
Query: 123 GGYYGSGRRGGEVAQFLVAL--------AERPAP-------------DTYPRRFISFCRV 161
GGYYGSG RGG ++ FL L AP P + SF +V
Sbjct: 650 GGYYGSGHRGGNLSSFLCGLRVDEKQIKTGMIAPPFTIGKRKLNHKTGANPMKCFSFFKV 709
Query: 162 GTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQV--TNNSKERPDVWIESPEKSIILS 219
G G + ++ + + + K++ K P F ++ ++ +ERPDVWI++ E SI++
Sbjct: 710 GGGFNTDDYATIRHQTDGKWHKWDI-KSPPTEFIELAGSHQERERPDVWIKADE-SIVVE 767
Query: 220 ITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYG 279
+ + I S+ F Y+LRFPR R+R DK W L ++ F+EL ++GKE
Sbjct: 768 VKAASVGI-SDSFRTNYTLRFPRFKRLRPDKDWKSALSIEEFMEL----KAKVEEGKE-D 821
Query: 280 GLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFVNV---PPAY 336
+ DK K R S++ +++ + +T+ + T +F + F ++ P
Sbjct: 822 EFRVDKKK--RGSKRVKRERIIAGTEDVGKTEYAG--PNTDVFKGLNFCVLSEMIHPSKK 877
Query: 337 SLDSLHKMVVENGGTFSMNLNNSVTHCVAADNKGLKYEAA--KRRGDVIHYSWVLDCCSQ 394
S + K++ ENGG+ + + V AD + +K A ++ ++ WV+ +Q
Sbjct: 878 SKVEVEKLIKENGGSIYQSPASKEDIIVIADKRVVKVAALMNAKKTSIVKPQWVIHAIAQ 937
Query: 395 KK-----------LLQLQPKYYLHLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNV 443
++ ++ + + L+ + ++++ DE D Y D+ + K ++ ++
Sbjct: 938 RESDAAQGRTSRFIIPFEMIHMLYCREEDTEEIEANSDEHGDPYCRDVGPLEYKGIIESM 997
Query: 444 DRSEDPKTIDYYKKKYCPQD------KWSCFHGCCIYF 475
R E Y + Q K S F GC F
Sbjct: 998 ARVEGKTLTKYLQDMLVKQGVDMTEFKGSMFWGCKAIF 1035
>gi|429860192|gb|ELA34937.1| DNA ligase 4 [Colletotrichum gloeosporioides Nara gc5]
Length = 994
Score = 136 bits (343), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 138/544 (25%), Positives = 254/544 (46%), Gaps = 56/544 (10%)
Query: 63 VAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLI 121
A + D +E ++ + EG+VLK+ S + R+ WLK+KPEY+ G LD ++
Sbjct: 473 TATSPDAIEPLLRKVVAEASEGLVLKNPRSMYRLNSRNDDWLKVKPEYMSEFGESLDCVV 532
Query: 122 IGGYYGSGRRGGEVAQFLVAL---AERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLK 178
IGGYYGSGRRGG ++ FL L P + SF +VG G E+ + + +
Sbjct: 533 IGGYYGSGRRGGALSSFLCGLRASQNHIQAGANPEKCFSFFKVGGGFKAEDYAEIRHRTE 592
Query: 179 PYFRKYEYPKRAPPSFYQVTNNSK--ERPDVWIESPEKSIILSITSDIRTIRSEVFSAPY 236
+ ++ K+ P + ++ +S+ E+PDVWI + ++ + + I S+ F+ +
Sbjct: 593 GKWNNWD-SKKPPVEYIELAGDSRQFEKPDVWIRPRDSFVLEAKAASIGG--SDQFALGF 649
Query: 237 SLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGE 296
+LRFPR ++R DK W++ L VQ F +L + ++ +++ K R + K
Sbjct: 650 TLRFPRFRKLRLDKNWNEGLSVQEFQDLRKRVEAEAK--EKTMSVENRK----RRAPKRI 703
Query: 297 KKNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFVN---VPPAYSLDSLHKMVVENGGTFS 353
K+ ++I + T V +T +F + F ++ P + L +V ENGG S
Sbjct: 704 KRELTIAGTE--NTPVQFAGEKTKVFEGLEFCVLSESLKPFKRTKAQLETLVKENGGQIS 761
Query: 354 MNLNNSVTHCVAADNKGLKYEAAKRRG------DVIHYSWVLDCCSQKK----LLQLQPK 403
+ AD +K + + G D+I W+ DC SQ + LL + +
Sbjct: 762 QRAIPQSDMILLADKNVVKVASLVKEGQKLGGVDIIRPRWLQDCLSQSQEDDYLLPYEER 821
Query: 404 YYLHLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNVDRSEDPKTIDYYKKKYCPQ- 462
+ LH +++ K + D + D Y D+ + +++Q+ V + E P + K + Q
Sbjct: 822 HILHATEALKTAAIQNTDMYGDSYARDISVDELRQVFKEVPKKE-PDMEPFNKAHFLDQL 880
Query: 463 ---------DKWSCFHGCCIYFYHSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNLA 513
K + FH C ++ + + D +VL RL+ + F G ++ ++
Sbjct: 881 EERGHGVREMKGAMFHRCLVHLHDVNDAGEDDIKVL------RLRNFLRFGGARLTPDVD 934
Query: 514 N--ATHVVVLSVLGYDVNFNSLTESFTAREKHLLWNKKL-HVVRSQWLEDCLAKEQKSEE 570
+ ATH+VV+ + + ++ K + +K+ H+V W+EDC ++ +E
Sbjct: 935 DEQATHIVVVG------DGDQRRQAAEDLRKEVSSRRKIPHIVTGDWVEDCWREKTLLDE 988
Query: 571 YEYS 574
+Y+
Sbjct: 989 DKYT 992
>gi|195130577|ref|XP_002009728.1| GI15517 [Drosophila mojavensis]
gi|193908178|gb|EDW07045.1| GI15517 [Drosophila mojavensis]
Length = 926
Score = 136 bits (342), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 106/393 (26%), Positives = 188/393 (47%), Gaps = 23/393 (5%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDR-SGKWLKLKPEYIRAG-SDLDVLIIG 123
++D F++ +++ EGIVLK S + PG R G W K K +YI ++ DVLIIG
Sbjct: 428 SLDHFNTLFQQMLDSNAEGIVLKKQNSIYRPGVRVGGGWYKDKADYIEGLITEFDVLIIG 487
Query: 124 GYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRK 183
G+Y R+ + FL+ + +P T S V + + + +LKP++R
Sbjct: 488 GFYN--RKRTFIESFLLGVL-KPGGGTERDEVYSIGCVAN--NTRQRGVLHNELKPHWRN 542
Query: 184 YEYPKRAPPSFYQVTNNSKE-RPDVWIESPEKSIILSI-TSDIRTIRSEVFSAPYSLRFP 241
PP +Y N KE PDVWI+ PEKSIIL + +D+ + + P SL FP
Sbjct: 543 AS--TDPPPLWYHYRPNEKEGAPDVWIQ-PEKSIILQVKAADLSP--NGAYYTPKSLHFP 597
Query: 242 RIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVS 301
R +R DK WH+C+ ++ + +L + K L D ++ R ++N
Sbjct: 598 RTQMMRIDKVWHECMTLEEYTQLCQGRGAIKKLNKRPANLSDFTTERKRQKMTPAERNRL 657
Query: 302 IVPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMN--LNNS 359
+ ++ + D +K + +F F ++ +S L + +NGGT N N+
Sbjct: 658 GLAAYEKRYDAEPLKSSSQLFEGFTFCILSGCREHSKQQLQVLAAQNGGTIVQNPLPNDP 717
Query: 360 VTHCVAADNKGLK---YEAAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKL 416
C+A D L + R D++ W+L C++++ + L+P+ L +++ + +
Sbjct: 718 KCICIAGDPVYLVKRLMQQQPRTNDILRMDWLLRVCNKQQ-IDLRPRDVLSATEALQLQF 776
Query: 417 QEEVDEFSDLYFWDL--DLADIKQLLSNVDRSE 447
+ D F D F DL + +++++L ++ +E
Sbjct: 777 AKSFDRFGD-SFTDLFESIDELQEVLQDISDAE 808
>gi|194769798|ref|XP_001966988.1| GF21760 [Drosophila ananassae]
gi|190622783|gb|EDV38307.1| GF21760 [Drosophila ananassae]
Length = 924
Score = 135 bits (340), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 122/442 (27%), Positives = 217/442 (49%), Gaps = 30/442 (6%)
Query: 24 ISTVAMNDGICVCVHVYMLSQLRSQIMAADQTGEPCWSLVAHNVDEVEKF---FKETIEN 80
I + +G + H Y+ R Q M +Q G + A + VE+F F++ ++N
Sbjct: 379 IYDLLFFNGKSMLDHTYIQRSYRLQKMIGEQEG-VLQLMRAQKITSVEQFNELFQQALDN 437
Query: 81 RDEGIVLKDLGSKWEPGDR-SGKWLKLKPEYIRAG-SDLDVLIIGGYYGSGRRGGEVAQF 138
+ EGIVLK S ++PG R G W K K +YI+ ++ DVLIIG +Y R+ V F
Sbjct: 438 KAEGIVLKKQNSTYQPGVRIGGGWFKDKADYIKGLITEFDVLIIGAFY--NRKRTFVESF 495
Query: 139 LVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVT-KLKPYFRKYEYPKRAPPSFYQV 197
L+ + + PAP R F +G ++ + V+ LKP++ ++ K PP +Y
Sbjct: 496 LLGVLQ-PAPAGSSHRHEVFS-IGCVTNNTQQRGVLNHTLKPHW--HDVAKEPPPLWYHY 551
Query: 198 TNNSKER-PDVWIESPEKSIILSI-TSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDC 255
+ PD+WIE P+ SIIL + +D+ + F SL FPR + R DK W +C
Sbjct: 552 KATDRAGCPDLWIE-PQNSIILQVKAADLAP--NGAFYTRKSLHFPRTEMKRDDKSWSEC 608
Query: 256 LDVQSFVELVHSSNGTTQKGKEYGGLQD--DKPKQFRSSRKGEKKNVSIVPSHFLQTDVS 313
+ +Q F E+ + K L+D K K R++ E++ + + + + +
Sbjct: 609 MTLQEFNEICEGPAAIKKLNKRQLRLEDVTTKRKHHRTT-PAERRRLGLA-VYEKRCRLD 666
Query: 314 DIKGETSIFSDMVFYFVNVPPA-YSLDSLHKMVVENGGTFSMN--LNNSVTHCVAADNKG 370
+ + +F + F ++ +S L ++ V+NGGT N N+ C+A D
Sbjct: 667 PEQSTSRLFEGLSFCILSGSAGRHSKSQLQELAVQNGGTIVENPLPNDPKCFCIAGDETF 726
Query: 371 LKYEAA---KRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEVDEFSDLY 427
L R D++ W+L ++K+ L+L+PK + ++ +++L E D++ D Y
Sbjct: 727 LVKRMILQEPRVYDIVRMEWLLR-VTRKQELELRPKDLMAATEPLREELAECFDQYGDSY 785
Query: 428 FWDL-DLADIKQLLSNVDRSED 448
D+ D +D+++LL ++ +++
Sbjct: 786 NKDITDASDLQELLEDMSLNQE 807
>gi|159126827|gb|EDP51943.1| DNA ligase, putative [Aspergillus fumigatus A1163]
Length = 979
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 117/387 (30%), Positives = 189/387 (48%), Gaps = 30/387 (7%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLII 122
A D+VE ++ + EG+VLK+ S + +R W+K+KPEY+ G LD+++I
Sbjct: 471 ATTKDQVEAALRKVVAEASEGLVLKNPRSPYRLNERHDDWMKVKPEYMTEFGESLDLIVI 530
Query: 123 GGYYGSGRRGGEVAQFLVALA---ERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 179
GGYYGSGRRGG ++ FL L + + SFC+VG G + + +
Sbjct: 531 GGYYGSGRRGGNLSSFLCGLRVDDGHASQGASASKCYSFCKVGGGFNAADYANIRHHTDG 590
Query: 180 YFRKYEYPKRAPPSFYQVTNNSK--ERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYS 237
+ ++ PK+ P ++ ++ ERPD+WI+ PE S+++ + + S+ F +
Sbjct: 591 KWMEWN-PKKPPTAYIELAGRDAQYERPDMWIK-PEDSVVICVKA-ASVSASDQFRLGLT 647
Query: 238 LRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEK 297
LRFPR R+R DK W L VQ F++L S+ + KE L D ++ R R +K
Sbjct: 648 LRFPRFKRLRMDKDWKSALSVQEFLDL-KSNVEQEHREKE---LNVDNSRRKRVKRTAKK 703
Query: 298 KNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFV---NVPPAYSLDSLHKMVVENGGTFSM 354
V + + DV IF + FY + + P + L ++V NGG F
Sbjct: 704 P--LTVAGYDMDEDVKYAGPSGHIFDGLNFYILTDSSAPIKKTKPELEQLVKANGGMF-F 760
Query: 355 NLNNSVTHCV-AADNKGLKYEAAKRRGDV--IHYSWVLDCCSQKK--------LLQLQPK 403
NN+ H + AD + +K + ++RGDV I SW++DC Q + LL +P+
Sbjct: 761 QTNNAAPHTICVADRRTVKAASLQKRGDVDIIRASWIIDCVKQNEIDAGLPDFLLPFEPR 820
Query: 404 YYLHLSDSSKKKLQEEVDEFSDLYFWD 430
+ + ++ VD+F D Y D
Sbjct: 821 HMFFATPGKHDEVASNVDQFGDSYARD 847
>gi|134117319|ref|XP_772886.1| hypothetical protein CNBK2570 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255504|gb|EAL18239.1| hypothetical protein CNBK2570 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|269935941|dbj|BAI49988.1| DNA ligase IV [Cryptococcus neoformans var. neoformans]
Length = 1079
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/368 (27%), Positives = 181/368 (49%), Gaps = 33/368 (8%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIGG 124
N ++ ++ + +E + EG+V+K ++ R W+K+KPEY + G +L+VL++GG
Sbjct: 443 NAKDIREYLERVVETKGEGLVVKKTDVIYQTNSRGYDWIKVKPEYSDQMGENLEVLVLGG 502
Query: 125 YYGSGRRGGEVAQFLVALAERPAPDTYPRR--FISFCRVGTGLSDEELDAVVTKLKPYFR 182
++G G R G++++ L L E+ D R F +FC +G+G+S + + ++ K K +++
Sbjct: 503 WWGKGGRSGKISRLLCGLREQAFDDGTVERPSFKTFCSIGSGMSYSDYEWILNKHKKHWK 562
Query: 183 KYEYPKRAPPSFYQVTN-NSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFP 241
++ + PP F ++ ++PDV+IE PE S ++ + + + + + ++LRFP
Sbjct: 563 PFD--RSNPPPFMKLGPVGLDDKPDVYIE-PENSFVIEVKAS-EIVPAGGYGIGFTLRFP 618
Query: 242 RIDRVRYDKPWHD--------------CLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPK 287
R + YDK D + V F++L + + G + K K
Sbjct: 619 RCKYIYYDKNSRDYALDDESKERDMWTSMSVDDFMDLFSRPKRSYDDSQGPG--KRKKRK 676
Query: 288 QFRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVE 347
RS KKN I S+F +SD ETSIFSDM FY V Y L +V +
Sbjct: 677 VIRS-----KKNHLI--SNFRGQKLSDADVETSIFSDMTFYIVKGTSDYPKADLEALVHK 729
Query: 348 NGGTFSM-NLNNSVTHCVAADNKGLKYEAAKRRG-DVIHYSWVLDCCSQKKLLQLQPKYY 405
+G F+ L++ ++ D K A R G +VI WV + +++ L ++
Sbjct: 730 HGADFTQAQLSDLSAIVISPDQKNPLVRAQIRHGVNVIKPEWVFESIARRTALPFLKEFL 789
Query: 406 LHLSDSSK 413
+ S+ ++
Sbjct: 790 VFASEEAQ 797
>gi|405978528|gb|EKC42908.1| DNA ligase 4 [Crassostrea gigas]
Length = 619
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 106/405 (26%), Positives = 179/405 (44%), Gaps = 39/405 (9%)
Query: 186 YPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDR 245
+ K+ PPSF + + KE+PD +IE PE S I+ I + I S+ F ++LRFPR+++
Sbjct: 234 FNKKNPPSFIILASGFKEKPDAYIE-PENSCIVQIKA-AEVIDSDKFKTGFTLRFPRVEK 291
Query: 246 VRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVP- 304
R DK W++C+ V ++ + G GK + R + KK +V
Sbjct: 292 FRDDKAWYECMTVPEVQKMKDRAGGKLAGGK----------VELREEEEPTKKKRKVVTH 341
Query: 305 -------SHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMNLN 357
+ F D+SD+ + IF F +N P + S ++ K V E GG+ N
Sbjct: 342 VIRPTLGAQFQAADLSDVTQTSKIFEGKEFCVINGPSSLSKAAIEKKVAEYGGSVVQN-P 400
Query: 358 NSVTHCVAADNKGLKYEAAKRRG--DVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKK 415
S T CV AD ++ +R D++ W C + + P +H S ++
Sbjct: 401 GSTTFCVLADKVVMRVTNLMKRDLYDIVKVDWFKRCLDAQTFIPWAPADMIHTSAKTQMA 460
Query: 416 LQEEVDEFSDL--YFWDLDLADIKQLLSNVDRSEDPKTIDYY---KKKYCPQDK-WSCFH 469
L+++ D+F D Y D +K ++D SE + D ++KY P D + F
Sbjct: 461 LKKDYDKFGDTCSYMQDTTPDQLKYTFQHMDNSEISISTDEMAELEEKYFPDDSPYGLFR 520
Query: 470 GCCIYFYHSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNL-ANATHVVVLSVLGYDV 528
C Y + P ++ +L L LE+ F GG V ++L +HV+ V
Sbjct: 521 TCRFYLDNKLVIGDPSTQI-KDSSLEFLALELRFIGGTVSDSLDKKVSHVM--------V 571
Query: 529 NFNSLTESFTAREKHLLWNKKLHVVRSQWLEDCLAKEQKSEEYEY 573
+ L+ +++ ++K H+V WL CL + E ++
Sbjct: 572 DKRDLSRVQELKQERRKRSRKFHIVNEDWLRQCLEEGSLCSERQF 616
>gi|327354849|gb|EGE83706.1| DNA ligase [Ajellomyces dermatitidis ATCC 18188]
Length = 1037
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 115/398 (28%), Positives = 202/398 (50%), Gaps = 30/398 (7%)
Query: 63 VAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLI 121
+ H+ ++E ++ + EG+VLK+ S + +R W+K+KPEY+ G LD ++
Sbjct: 469 IGHSAADIEHLLRKVVAEASEGLVLKNPNSPYRLNERHDDWMKVKPEYMTEFGESLDCIV 528
Query: 122 IGGYYGSGRRGGEVAQFLVAL---AERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLK 178
IGGYYGSGRRGG ++ FL L +P + SFC+VG G + + +
Sbjct: 529 IGGYYGSGRRGGALSSFLCGLRVDESHAKKGDHPTKCYSFCKVGGGFTAADYANIRHHTD 588
Query: 179 PYFRKYEYPKRAPPSFYQVTNN--SKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPY 236
+ ++ PKR P + ++ ERPDVWI+ PE S++L + + T ++ F
Sbjct: 589 GKWIDWD-PKRPPTEYIELAGGDLQYERPDVWIK-PEDSVVLCVKASSVT-PTDQFRLGL 645
Query: 237 SLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGE 296
++RFPR R+R DK WH L +Q F++L S+ K KE+ + D ++ R R +
Sbjct: 646 TVRFPRFKRLRMDKDWHSALSIQEFMDL-KSNIEREVKEKEF---KVDDSRKLRHRRTTK 701
Query: 297 KKNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFVNVP---PAYSLDSLHKMVVENGG-TF 352
K +T + G+ +F+ + F+ + P + L ++V NGG +
Sbjct: 702 KPLTVAGYDGGKKTKYAGPSGK--LFNGLNFFVMTESVHQPKKTKAQLEQLVKANGGKIY 759
Query: 353 SMNLNNSVTHCVAADNKGLKYEAAKRRG--DVIHYSWVLDCCSQKK--------LLQLQP 402
N T C+ AD + +K + ++ +VI SW+ DC SQ + L+ L+P
Sbjct: 760 QTNTAAENTICI-ADRRTVKVASLQKNAKENVIRPSWLFDCLSQNERDHGLPDLLIPLEP 818
Query: 403 KYYLHLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLL 440
K+ + ++++ VD++SD Y D+D +++K+++
Sbjct: 819 KHMFFTTVDQEEEIAGNVDKYSDSYARDIDASELKKVI 856
>gi|261191087|ref|XP_002621952.1| DNA ligase [Ajellomyces dermatitidis SLH14081]
gi|239590996|gb|EEQ73577.1| DNA ligase [Ajellomyces dermatitidis SLH14081]
Length = 1037
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 115/398 (28%), Positives = 202/398 (50%), Gaps = 30/398 (7%)
Query: 63 VAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLI 121
+ H+ ++E ++ + EG+VLK+ S + +R W+K+KPEY+ G LD ++
Sbjct: 469 IGHSAADIEHLLRKVVAEASEGLVLKNPNSPYRLNERHDDWMKVKPEYMTEFGESLDCIV 528
Query: 122 IGGYYGSGRRGGEVAQFLVAL---AERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLK 178
IGGYYGSGRRGG ++ FL L +P + SFC+VG G + + +
Sbjct: 529 IGGYYGSGRRGGALSSFLCGLRVDESHAKKGDHPTKCYSFCKVGGGFTAADYANIRHHTD 588
Query: 179 PYFRKYEYPKRAPPSFYQVTNN--SKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPY 236
+ ++ PKR P + ++ ERPDVWI+ PE S++L + + T ++ F
Sbjct: 589 GKWIDWD-PKRPPTEYIELAGGDLQYERPDVWIK-PEDSVVLCVKASSVT-PTDQFRLGL 645
Query: 237 SLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGE 296
++RFPR R+R DK WH L +Q F++L S+ K KE+ + D ++ R R +
Sbjct: 646 TVRFPRFKRLRMDKDWHSALSIQEFMDL-KSNIEREVKEKEF---KVDDSRKLRHRRTTK 701
Query: 297 KKNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFVNVP---PAYSLDSLHKMVVENGG-TF 352
K +T + G+ +F+ + F+ + P + L ++V NGG +
Sbjct: 702 KPLTVAGYDGGKKTKYAGPSGK--LFNGLNFFVMTESVHQPKKTKAQLEQLVKANGGKIY 759
Query: 353 SMNLNNSVTHCVAADNKGLKYEAAKRRG--DVIHYSWVLDCCSQKK--------LLQLQP 402
N T C+ AD + +K + ++ +VI SW+ DC SQ + L+ L+P
Sbjct: 760 QTNTAAENTICI-ADRRTVKVASLQKNAKENVIRPSWLFDCLSQNERDHGLPDLLIPLEP 818
Query: 403 KYYLHLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLL 440
K+ + ++++ VD++SD Y D+D +++K+++
Sbjct: 819 KHMFFTTVDQEEEIAGNVDKYSDSYARDIDASELKKVI 856
>gi|70997395|ref|XP_753446.1| DNA ligase [Aspergillus fumigatus Af293]
gi|74673507|sp|Q4WVG8.1|DNLI4_ASPFU RecName: Full=DNA ligase 4; AltName: Full=DNA ligase IV; AltName:
Full=Polydeoxyribonucleotide synthase [ATP] 4
gi|66851082|gb|EAL91408.1| DNA ligase, putative [Aspergillus fumigatus Af293]
Length = 979
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 117/387 (30%), Positives = 189/387 (48%), Gaps = 30/387 (7%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLII 122
A D+VE ++ + EG+VLK+ S + +R W+K+KPEY+ G LD+++I
Sbjct: 471 ATTKDQVEAALRKVVAEASEGLVLKNPRSPYRLNERHDDWMKVKPEYMTEFGESLDLIVI 530
Query: 123 GGYYGSGRRGGEVAQFLVALA---ERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 179
GGYYGSGRRGG ++ FL L + + SFC+VG G + + +
Sbjct: 531 GGYYGSGRRGGNLSSFLCGLRVDDGHASQGASASKCYSFCKVGGGFNAADYANIRHHTDG 590
Query: 180 YFRKYEYPKRAPPSFYQVTNNSK--ERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYS 237
+ ++ PK+ P ++ ++ ERPD+WI+ PE S+++ + + S+ F +
Sbjct: 591 KWMEWN-PKKPPTAYIELAGRDAQYERPDMWIK-PEDSVVICVKA-ASVSASDQFRLGLT 647
Query: 238 LRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEK 297
LRFPR R+R DK W L VQ F++L S+ + KE L D ++ R R +K
Sbjct: 648 LRFPRFKRLRMDKDWKSALSVQEFLDL-KSNVEQEHREKE---LNVDNSRRKRVKRTAKK 703
Query: 298 KNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFV---NVPPAYSLDSLHKMVVENGGTFSM 354
V + + DV IF + FY + + P + L ++V NGG F
Sbjct: 704 P--LTVAGYDMDEDVKYAGPSGHIFDGLNFYILTDSSAPIKKTKPELEQLVKANGGMF-F 760
Query: 355 NLNNSVTHCV-AADNKGLKYEAAKRRGDV--IHYSWVLDCCSQKK--------LLQLQPK 403
NN+ H + AD + +K + ++RGDV I SW++DC Q + LL +P+
Sbjct: 761 QTNNAAPHTICVADRRTVKAASLQKRGDVDIIRPSWIIDCVKQNEIDAGLPDFLLPFEPR 820
Query: 404 YYLHLSDSSKKKLQEEVDEFSDLYFWD 430
+ + ++ VD+F D Y D
Sbjct: 821 HMFFATPGKHDEVASNVDQFGDSYARD 847
>gi|239613091|gb|EEQ90078.1| DNA ligase 4 [Ajellomyces dermatitidis ER-3]
Length = 1037
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 115/398 (28%), Positives = 202/398 (50%), Gaps = 30/398 (7%)
Query: 63 VAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLI 121
+ H+ ++E ++ + EG+VLK+ S + +R W+K+KPEY+ G LD ++
Sbjct: 469 IGHSAADIEHLLRKVVAEASEGLVLKNPNSPYRLNERHDDWMKVKPEYMTEFGESLDCIV 528
Query: 122 IGGYYGSGRRGGEVAQFLVAL---AERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLK 178
IGGYYGSGRRGG ++ FL L +P + SFC+VG G + + +
Sbjct: 529 IGGYYGSGRRGGALSSFLCGLRVDESHAKKGDHPTKCYSFCKVGGGFTAADYANIRHHTD 588
Query: 179 PYFRKYEYPKRAPPSFYQVTNN--SKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPY 236
+ ++ PKR P + ++ ERPDVWI+ PE S++L + + T ++ F
Sbjct: 589 GKWIDWD-PKRPPTEYIELAGGDLQYERPDVWIK-PEDSVVLCVKASSVT-PTDQFRLGL 645
Query: 237 SLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGE 296
++RFPR R+R DK WH L +Q F++L S+ K KE+ + D ++ R R +
Sbjct: 646 TVRFPRFKRLRMDKDWHSALSIQEFMDL-KSNIEREVKEKEF---KVDDSRKLRHRRTTK 701
Query: 297 KKNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFVNVP---PAYSLDSLHKMVVENGG-TF 352
K +T + G+ +F+ + F+ + P + L ++V NGG +
Sbjct: 702 KPLTVAGYDGGKKTKYAGPSGK--LFNGLNFFVMTESVHQPKKTKAQLEQLVKANGGKIY 759
Query: 353 SMNLNNSVTHCVAADNKGLKYEAAKRRG--DVIHYSWVLDCCSQKK--------LLQLQP 402
N T C+ AD + +K + ++ +VI SW+ DC SQ + L+ L+P
Sbjct: 760 QTNTAAENTICI-ADRRTVKVASLQKNAKENVIRPSWLFDCLSQNERDHGLPDLLIPLEP 818
Query: 403 KYYLHLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLL 440
K+ + ++++ VD++SD Y D+D +++K+++
Sbjct: 819 KHMFFTTVDQEEEIAGNVDKYSDSYARDIDASELKKVI 856
>gi|392580238|gb|EIW73365.1| hypothetical protein TREMEDRAFT_67336 [Tremella mesenterica DSM
1558]
Length = 1047
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 175/352 (49%), Gaps = 32/352 (9%)
Query: 69 EVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIGGYYG 127
++ ++ +E+R EG+V+K L S ++ R W+K+KPEY + G LDV+++GG++G
Sbjct: 456 DIRAMLEKILESRGEGLVVKKLDSTYQTNSRGQDWVKVKPEYADQMGETLDVMVLGGWWG 515
Query: 128 SGRRGGEVAQFLVALAER--PAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYE 185
G R G+++ L L + D +F +FCRVG+G+S + + ++ K + +++ ++
Sbjct: 516 KGGRTGKLSSMLCGLRVQRDDEGDGGIPQFATFCRVGSGMSYSDYEWILNKHREHWKTFK 575
Query: 186 YPKRAPPSFYQVTN-NSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRID 244
+ PPS+ ++ + PDV+IE PE S ++ + + + F Y+LRFPR
Sbjct: 576 --RSNPPSWMKMGEIGLDDSPDVYIE-PEHSFVMQVKASEIVPATGNFGIGYTLRFPRCK 632
Query: 245 RVRYDKPWHD--------------CLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFR 290
+ YD D CL V+ F EL++ ++Y +DD+ R
Sbjct: 633 FIFYDTASRDHPVEDPEMERDMWNCLSVEEFTELLNKPK------RKY---EDDEQGSKR 683
Query: 291 SSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGG 350
RK + + S +S + E+ IF +M FY V S L ++ E+GG
Sbjct: 684 RKRKPVTRTKVQLISSVKGQLLSQEEVESGIFDNMKFYVVKGDNKNSKAELEALIHEHGG 743
Query: 351 TFSM-NLNNSVTHCVAADNKGLKYEAAKRRG-DVIHYSWVLDCCSQKKLLQL 400
F+ L++ +A D+K A K++G ++ SW+ + +KK L +
Sbjct: 744 DFTQAQLSDLSAIVIAPDDKSPLLRAQKKKGVSIVKPSWIYESIKRKKPLPM 795
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 47/103 (45%), Gaps = 22/103 (21%)
Query: 318 ETSIFSDMVFY-----------FVNVPPAYS----LDSLHKMVVENGGTFSMNLNN-SVT 361
E IF+ +VFY PP+ LD+ K+++ENGG N+N +T
Sbjct: 937 EDKIFNHLVFYIDTTENTKKNGLAGSPPSSEVIERLDNARKLLIENGGKVVDNINEPKLT 996
Query: 362 HCVAADNKGLKY------EAAKRRGDVIHYSWVLDCCSQKKLL 398
H + D+ +Y + +R ++ SWV +C ++ L+
Sbjct: 997 HIIMDDDDSSRYGELSWKTSKPKRKHIVLPSWVTECVEEETLM 1039
>gi|255954011|ref|XP_002567758.1| Pc21g07170 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211589469|emb|CAP95614.1| Pc21g07170 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 990
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 135/519 (26%), Positives = 238/519 (45%), Gaps = 52/519 (10%)
Query: 74 FKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIGGYYGSGRRG 132
++ + EG+VLK+ S + +R W+K+KP+Y+ G LDV++IGGYYGSGRRG
Sbjct: 477 LRKVVAEASEGLVLKNPRSPYRLNERHDDWMKVKPDYMTEFGESLDVIVIGGYYGSGRRG 536
Query: 133 GEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPP 192
G ++ FL L + + + SFC+VG G + + V ++ ++ K+ P
Sbjct: 537 GALSSFLCGLRVDDSTQAAEKCW-SFCKVGGGFTAADYQEVRHHTDGKWKAWD-AKKPPT 594
Query: 193 SFYQVTNN--SKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDK 250
+F ++ ERPD+WI+ P SI+L + + I S+ F +LRFPR ++R DK
Sbjct: 595 TFVELAGGDAQHERPDMWIK-PSDSIVLCVKAASVAI-SDQFRMGLALRFPRFKKLRKDK 652
Query: 251 PWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQT 310
W L VQ F++L S+ + KE+ K + R+++K V H
Sbjct: 653 DWKTALSVQEFLDL-KSNAEQEHREKEFSVDNSRKKRVKRATKKP-----LTVAGHEDNV 706
Query: 311 DVSDIKGETSIFSDMVFYFV---NVPPAYSLDSLHKMVVENGGTFSMNLNNSVTHCVAAD 367
DV + +F ++ F+ + VP + L ++V NGG +V A+
Sbjct: 707 DVQYLGPSGHVFDELNFFIMTESTVPEKKTKLQLEQLVKANGGKIYQTKTAAVDTLCVAE 766
Query: 368 NKGLKYEAAKRRG--DVIHYSWVLDCCSQKK--------LLQLQPKYYLHLSDSSKKKLQ 417
+ +K + ++ G ++I SW++DC Q + LL +P++ +++ ++++
Sbjct: 767 RRTVKVASLQKSGEQNIIRPSWLIDCVKQNEIDAGLPDLLLPFEPRHMFFMTEEKEEEVA 826
Query: 418 EEVDEFSDLYFWDLDLADIKQLLSNVDRSEDPKTIDYYKKK--------YCPQDKWSCFH 469
VD+F D Y D + ++K + D DP+T + + Y W F
Sbjct: 827 ANVDKFMDSYARDTTVNELK----DADDVPDPETTQRIETRIQERVNAGYTVPVGW-LFR 881
Query: 470 GCCIYFYHSTEPLSPDWEVLLGLALRRLKLEIS-----FHGGKVCNNLANA--THVVVLS 522
G +FY + PD + +L+ + F ++ L ++ THV+V
Sbjct: 882 GLKFHFYSNGN--QPDESASREIRREDQRLQFARNTARFAAAEIAKTLKSSGITHVIVDP 939
Query: 523 VLGYDVNFNSLTESFTAREKHLLWNKKLHVVRSQWLEDC 561
+ SL + A+ K H+V W+E+C
Sbjct: 940 ETVSSADKTSLRNTLAAKPG----AKMPHLVSVGWVEEC 974
>gi|167515574|ref|XP_001742128.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778752|gb|EDQ92366.1| predicted protein [Monosiga brevicollis MX1]
Length = 998
Score = 132 bits (332), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 82/238 (34%), Positives = 126/238 (52%), Gaps = 27/238 (11%)
Query: 63 VAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLI 121
V H D+ +F ++ EG+++K S++ G R G W K KPEY ++ D LD++I
Sbjct: 454 VGHGKDDFLRFANHVMQQGHEGVIVKRQDSRYCLGQRGGGWWKWKPEYHQSLQDTLDLVI 513
Query: 122 IGGYYGSG-RRGGEVAQFLVALAERPAPDT----YPRRFISFCRVGTGLSDEELDAVVTK 176
+GGY+G G RR G ++ F++A+AE PD P RF S C+VGTG S EL+ V K
Sbjct: 514 VGGYFGEGSRRSGAISHFMLAVAEDRPPDAPAGWKPTRFHSCCKVGTGYSFNELERVRRK 573
Query: 177 LKPYFRKYEYPKRAP----------PSFYQVTNNSKERPDVWIESPEKSIILSITSDIRT 226
L P++ K++ P AP P + N KERPD WI P++SI++ + +
Sbjct: 574 LAPHWHKWKAP--APGDTLNPCGMGPGVFLAMPNFKERPDYWI-PPDQSIVVEMKA-ASL 629
Query: 227 IRSEVFSAPYSLRFPRIDRVR-YDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQD 283
I + F+ +LRFPR+ + R +K W +C + T+ G+ G+ D
Sbjct: 630 IETNQFATGLTLRFPRLVKFRDSEKDWFECATISDL------RTAGTRHGQLVSGVLD 681
>gi|440637168|gb|ELR07087.1| hypothetical protein GMDG_08264 [Geomyces destructans 20631-21]
Length = 1002
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 104/409 (25%), Positives = 181/409 (44%), Gaps = 42/409 (10%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLII 122
AH+V+ +E ++ + EG+VLK+ S + R+ W+K+KPEY+ G LD ++I
Sbjct: 478 AHSVEAIEPLLRKVVAEASEGLVLKNPRSIYRLNSRNDDWMKVKPEYMTGFGESLDCIVI 537
Query: 123 GGYYGSGRRGGEVAQFLVAL---AERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 179
GGYYGSG RGG ++ FL L P + SF +VG G E+ + +
Sbjct: 538 GGYYGSGHRGGRLSSFLCGLRVDQNHIQKGADPMKCYSFFKVGGGFKAEDYANIRHHTEN 597
Query: 180 YFRKYEYPKRAPPSFYQVTNNSK--ERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYS 237
+ ++ P++ P ++ ERPDVWI + + S+ F +
Sbjct: 598 KWVDWD-PRKPPIPLIELAGGEAQFERPDVWIRPCDSVV--VSVKAASVCASDSFRVGLT 654
Query: 238 LRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD-KPKQF-----RS 291
LRFPR +R D+ W L +Q F++L L+D+ + K+F R
Sbjct: 655 LRFPRFKHLRMDRDWSTSLSIQEFIDLKSR-------------LEDESREKEFTVDTRRK 701
Query: 292 SRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFVNVP---PAYSLDSLHKMVVEN 348
+ K KK + + + T +G + F + F ++ P S L + + N
Sbjct: 702 AAKTSKKQLLVAGNDNKATKPYAGQG-SDAFHGLNFCVLSEATKLPKKSKVELEQYIKAN 760
Query: 349 GGTFSMNLNNSVTHCVAADNKGLKYEAAKRRG--DVIHYSWVLDCCSQ--------KKLL 398
GG+ + V AD K +K + + G +V+ W+ D Q L+
Sbjct: 761 GGSIFQSPTTQADTIVIADKKVVKVASLMKSGLQNVVRPRWLFDAVLQYEADPGRETHLV 820
Query: 399 QLQPKYYLHLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNVDRSE 447
+P++ + +++Q+ VD F D Y D+ ++K++ N+ + E
Sbjct: 821 LFEPRHMFYTVQHEIERVQQNVDRFGDSYARDVGATELKEICDNMPKEE 869
>gi|449548255|gb|EMD39222.1| hypothetical protein CERSUDRAFT_134188 [Ceriporiopsis subvermispora
B]
Length = 1018
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 175/344 (50%), Gaps = 28/344 (8%)
Query: 76 ETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIGGYYGSGRRGGE 134
E + +R EG+VLK S++ R+ W+K+KPEY+ G +DVL++ G YGSGRR G
Sbjct: 444 EIMASRGEGLVLKHPDSEYVLNGRNRDWIKVKPEYMDNMGETVDVLVVAGGYGSGRRAGG 503
Query: 135 VAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSF 194
V+ + A+ + + + ++ +F R+GTGLS D + + KP+ E+ + PPSF
Sbjct: 504 VSTLICAVLDDRSQNEEEIKYSTFVRIGTGLS--FADYIWVRSKPW---KEWDPKNPPSF 558
Query: 195 YQVTNNSKE-RPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWH 253
QV E + D+++E PE S IL + + ++ + +++RFPR +R D
Sbjct: 559 LQVARKGNEDKGDLYLE-PEDSFILRVKA-AEITATDGYHLGFTMRFPRALNIRDDLGIE 616
Query: 254 DCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTDVS 313
DC+ + +E + S + ++D PK + RK +K VS++P + ++
Sbjct: 617 DCMSATAVLETIRSERKRKME-------REDSPK--KKQRKTSQK-VSLMP-EYQAVNMK 665
Query: 314 DIKGETSIFSDMVFYFVNVPPAYSLDS----LHKMVVENGGTFSMNLNNSVTHCVAADNK 369
+++ ++ IFS M F + P + + D L +++ +GG+ N V
Sbjct: 666 NVEEKSDIFSGMKFMVGSDPKSTTGDQDKKELMRLIRAHGGSLVQIARNQPDLLVIYGGT 725
Query: 370 GLKYE--AAKRRG--DVIHYSWVLDCCSQKKLLQLQPKYYLHLS 409
Y+ A +G D+I W++D ++ + + ++ +Y+ H +
Sbjct: 726 TTPYDIKAIMNKGTTDIIRPQWIMDSIAKNQHVPMKKRYFFHAT 769
>gi|195043908|ref|XP_001991714.1| GH11911 [Drosophila grimshawi]
gi|193901472|gb|EDW00339.1| GH11911 [Drosophila grimshawi]
Length = 922
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 104/375 (27%), Positives = 177/375 (47%), Gaps = 21/375 (5%)
Query: 64 AHNVDEVEKF---FKETIENRDEGIVLKDLGSKWEPGDR-SGKWLKLKPEYIRAG-SDLD 118
A + +E F F++ +++ EGIVLK S ++PG R G W K K +YI ++ D
Sbjct: 418 AEKIASLEHFNTLFQQMLDSNAEGIVLKKQNSVYKPGVRVGGGWYKDKADYIEGLITEFD 477
Query: 119 VLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLK 178
VLIIGG+Y R+ + FLV + +P DT S V + + + +L
Sbjct: 478 VLIIGGFYN--RKRTFIESFLVGVL-KPGGDTERDEVYSIGCVAN--NTRQRSVLHHELS 532
Query: 179 PYFRKYEYPKRAPPSFYQVTNNSKE-RPDVWIESPEKSIILSITSDIRTIRSEVFSAPYS 237
P++R PP +Y N K+ PDVWI+ P+KSI+L + + T F+ P S
Sbjct: 533 PHWRNAS--TDPPPLWYHYKPNEKDGSPDVWIQ-PDKSIVLQVKAADLTPNGAYFT-PKS 588
Query: 238 LRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEK 297
L FPR +R DK W++C+ +Q + EL G + K L D ++ R +
Sbjct: 589 LHFPRTQLMRDDKVWNECMTLQEYTELCQGRGGIKKLNKRQASLNDFTTERKRQKITPAE 648
Query: 298 KNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMN-- 355
+N + ++ + DV ++ + +F F ++ S L + +NGGT N
Sbjct: 649 RNRLGLAAYEKRYDVEPLEHSSQLFDGFSFCILSGARGNSKQQLQTLAAKNGGTIVQNPL 708
Query: 356 LNNSVTHCVAADNKGLK---YEAAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSS 412
N+ C+A D L + R +++ W+L C +K+ ++L+P+ L +++
Sbjct: 709 PNDPKCICIAGDLIYLVERLMQQQPRTNNILRLDWLLRVC-EKQNIELRPRDVLSATNAL 767
Query: 413 KKKLQEEVDEFSDLY 427
+ + + D D Y
Sbjct: 768 QSQFAKSFDRLGDSY 782
>gi|412987999|emb|CCO19395.1| predicted protein [Bathycoccus prasinos]
Length = 954
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 110/401 (27%), Positives = 196/401 (48%), Gaps = 27/401 (6%)
Query: 67 VDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVLIIGGYY 126
+ ++ +E ++ +EGIV+K L S W PG+R W+KLKP+Y SD D +IIGGYY
Sbjct: 464 IAKISDCLREAQDHGEEGIVVKLLDSPWVPGERGHNWVKLKPDYCET-SDYDCVIIGGYY 522
Query: 127 GSGRR-GGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPY--FRK 183
G GR G+++Q+L+ + + ++FC+VGTG + E+ + KLK F +
Sbjct: 523 GEGRGRAGKISQWLLGVIKDGTQRDKNPTIMTFCKVGTGFNREDQHYLRDKLKDLMRFNR 582
Query: 184 YEYPKRAPPSF--YQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFP 241
K ++ Y+ + E PDVWI +PEKS+++++ D+R + S F+APY LRFP
Sbjct: 583 KNVDKNYTKTYERYECSGMLGETPDVWITNPEKSVVMTVKGDVRLVPSHTFNAPYGLRFP 642
Query: 242 RIDRVRYDKPWHD-CLD------VQSFVELVHSSNGTTQKGKEYGGLQDDKPKQF----R 290
R +R +KPW++ C D + +V V G G DD+ + R
Sbjct: 643 RCSAIRPEKPWNEICTDKDIAETAERYVTKVTHKGSRGGDGVGNGEQGDDERTAYKEYDR 702
Query: 291 SSRKG----EKKNVSI---VPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHK 343
+ KG +K+++++ +H DV ++ + IF F + + + +
Sbjct: 703 KNAKGLKRKQKRSLAVQEKYVAHMQPVDVRNVVTISKIFEGTTFSAIGCDRDVKKE-IAQ 761
Query: 344 MVVENGGTFSMNLNNSVTHCVAADNKGLKYEAAKRRGDVIHYSWVLDCCSQKKLLQLQPK 403
VV GG F ++ +V VA + + +V+ +W+ C ++++ + +
Sbjct: 762 FVVARGGKFFESVVRNVNRVVAPPTIEVDDAYLQACDEVLSTNWLFS-CKEQEIWPPKAR 820
Query: 404 YYLHLSDSSKKKLQEEVDEFSDLYFW-DLDLADIKQLLSNV 443
++ +S S + +D F D + DL+ D + + V
Sbjct: 821 DWIKVSPSVATLYDKTIDAFGDAHMSEDLNDEDFRAMRHQV 861
>gi|195448859|ref|XP_002071845.1| GK10206 [Drosophila willistoni]
gi|194167930|gb|EDW82831.1| GK10206 [Drosophila willistoni]
Length = 935
Score = 130 bits (326), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 130/527 (24%), Positives = 233/527 (44%), Gaps = 76/527 (14%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDR-SGKWLKLKPEYIRA-GSDLDVLIIG 123
++++ ++F+E +++ EGIVLK S ++PG R G W K K +YI+ ++ DVLIIG
Sbjct: 437 SIEQFHQYFQEALDSNAEGIVLKMQNSTYKPGVRVGGGWYKDKADYIKGLTTEFDVLIIG 496
Query: 124 GYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRK 183
G+Y R+ + FL+ + + ++ S RV + L R
Sbjct: 497 GFYN--RKMTFIESFLLGVLQTQTNNSGRDEVFSIGRVANNTRQRVV------LNDALRS 548
Query: 184 YEYPKRA--PPSFYQVTNNSKER-PDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRF 240
+ + A PP ++ N KE PDVWIE P SIIL + + ++A SL F
Sbjct: 549 HWHKASAEPPPLWFHYKANEKEGCPDVWIE-PRHSIILQVKAADLAPYGAFYTAK-SLHF 606
Query: 241 PRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEK--- 297
PR + VR DK W++C+ +Q F +L G + K L D F + RK +K
Sbjct: 607 PRTELVRDDKVWNECMTLQEFQQLCEGQIGIKKLNKRQLRLDD-----FTTERKRQKLTP 661
Query: 298 -KNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSL--DSLHKMVVENGGTFSM 354
+ + S + + ++ T +F + F ++ PA L +V++NGG
Sbjct: 662 AERSRLGLSAYEKRRCVPLEANTLLFDEFKFCILSGSPARRQHKHQLRDLVLQNGGFI-- 719
Query: 355 NLNNSVTH-----CVAADNKGLK---YEAAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYL 406
+ N + H C+A D + + R+ +++ W+L CC +K+ ++L+PK L
Sbjct: 720 -VENPLPHDPKCICIAGDITYMVERLMQQFARKCEIVRMDWLLRCC-EKQQIELRPKDVL 777
Query: 407 HLSDSSKKKLQEEVDEFSDLY---FWDL-DLADIKQLLSNVDRSEDPKTIDYYKKKYCPQ 462
++ +++ + D F D Y F + +L D+ +++ D ++ K D+ + Y
Sbjct: 778 APTEPLRQQFAKSFDRFGDGYSESFATIQELQDVLDDITDADLEQNAK--DFESQAYHDL 835
Query: 463 DK------WSCFHGCCIYFYHSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNLAN-- 514
++ + F Y ++ +P++ W + HGG++ ++ +
Sbjct: 836 EQSLDYTDYYIFRNIVGYLSNNNDPMTRLWFLQ--------------HGGQLASDSTDRF 881
Query: 515 ATHVVVLSVLGYDVNFNSLTESFTAREKHLLWNKKLHVVRSQWLEDC 561
THV + D N L A + V+ S WL C
Sbjct: 882 LTHVFIDVTKKLD-NLELLIHQLPA---------YVQVLNSNWLRQC 918
>gi|325091236|gb|EGC44546.1| DNA ligase [Ajellomyces capsulatus H88]
Length = 1023
Score = 129 bits (324), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 114/400 (28%), Positives = 203/400 (50%), Gaps = 28/400 (7%)
Query: 63 VAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLI 121
+ H+ +++ ++ + EG+VLK+ S + +R W+K+KPEY+ G LD ++
Sbjct: 468 IGHSAADIDPLLRKVVAEASEGLVLKNPNSPYRLNERHDDWMKVKPEYMTEFGESLDCIV 527
Query: 122 IGGYYGSGRRGGEVAQFLVAL---AERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLK 178
IGGYYGSGRRGG ++ FL L +P + SFC+VG G + + +
Sbjct: 528 IGGYYGSGRRGGALSSFLCGLRVDGSHSKTGDHPTKCYSFCKVGGGFTAADYANIRHHTD 587
Query: 179 PYFRKYEYPKRAPPSFYQVTNN--SKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPY 236
+ ++ PKR P + ++ ERPDVWI+ PE S++L + + ++ F
Sbjct: 588 GKWMDWD-PKRPPTEYIELAGGDLQYERPDVWIK-PEDSVVLCVKAS-SVSSTDQFRLGL 644
Query: 237 SLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGE 296
++RFPR R+R DK W L +Q F++L S+ K KE+ + D ++ R RK
Sbjct: 645 TVRFPRFKRLRMDKDWRSALSIQEFMDL-KSNVEREVKEKEF---KVDDSRKVR-HRKTV 699
Query: 297 KKNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFVNVP---PAYSLDSLHKMVVENGGTFS 353
KK ++I + + + +F + F+F+ P + L ++V NGG
Sbjct: 700 KKPLTIA-GYDGGKKIEYVGPSGKLFDGLNFFFMTESVHQPKKTKAQLEQLVKANGGKIY 758
Query: 354 MNLNNSVTHCVAADNKGLKYEAAKRRG--DVIHYSWVLDCCSQKK--------LLQLQPK 403
N + AD + +K + ++ ++I SW+ DC +Q + LL L+PK
Sbjct: 759 QTNNVAENTICIADRRTVKVASLQKNAKENIIRPSWLFDCLTQNERDRGLPDLLLPLEPK 818
Query: 404 YYLHLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNV 443
+ + ++++ E VD++SD Y D+D++++K+LL ++
Sbjct: 819 HMFFTTADQEEEIAEHVDKYSDSYARDIDVSELKKLLDSM 858
>gi|332016529|gb|EGI57410.1| DNA ligase 4 [Acromyrmex echinatior]
Length = 898
Score = 129 bits (324), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 131/543 (24%), Positives = 225/543 (41%), Gaps = 75/543 (13%)
Query: 59 CWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGK-WLKLKPEYI-RAGSD 116
C S + N +E+ K F + N +EG+V+K K++P R G K+K EY D
Sbjct: 403 CQSTLISNREELIKEFNTCLRNNEEGLVIKKCNMKYKPNIRDGNGCYKIKAEYSDNLVQD 462
Query: 117 LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDT----YPRRFISFCRVGTGLSDEELDA 172
+D++I+GGYYG G+ G + F++ + AP P +F S V TG+ DE L
Sbjct: 463 IDLIILGGYYGEGKYTGIIKSFMMGVV---APTNKERENPSQFFSIVSVSTGIRDEMLRH 519
Query: 173 VVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVF 232
+ TKL PY+ K E P+ + + +PD+WI PE SIIL+I + +RS +
Sbjct: 520 LQTKLAPYWIK-ERPE-------NIVGPKRNQPDMWIH-PEHSIILTIRAT-EIVRSNEY 569
Query: 233 SAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQD------DKP 286
YSLRFPR+ VR DKPW+ + L + K L D K
Sbjct: 570 PIGYSLRFPRVTNVRMDKPWYSSCTTLELLSLTKDEGMIQKLTKREATLHDIDRVPVSKL 629
Query: 287 KQFRSSRKGEKKNV---SIVPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHK 343
++ S K + NV +VP T + +N S + + +
Sbjct: 630 QKVASRSKSIEHNVYDKRVVPL-------------TRLLDGKEICVINGTDELSKEQIEE 676
Query: 344 MVVENGGTFSMNLNNSVTHCVAADNKGLKYEAAKRRG--DVIHYSWV-----LDCCSQKK 396
++ ++ N N+ + +N+ ++ + G DV+ WV ++
Sbjct: 677 ILQQHSARVVQNPINTTFCVIVGNNRTIRGKEVVNNGKYDVVTLDWVKRVTNINRSDWTS 736
Query: 397 LLQLQPKYYLHLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNVDRSEDPKTIDYYK 456
L+ P L ++++L E DE+ D + D D +K+ + + + +D +
Sbjct: 737 LIDFLPWELLCSRAITRRQLTENYDEYYDSFVVDADEESLKRSFDKIAKPIIFEVLDEQE 796
Query: 457 KKYCPQDKWSCFHGCCIYFYHSTEPLSPDWEVLLGLALRR---LKLEISFHGGKVCNNL- 512
K + + ST P S ++ +GL + K + F G + +N+
Sbjct: 797 KDMNKE------------LFGSTSPYSLFGDI-IGLFENQSCNAKFKFRFMSGTIKDNID 843
Query: 513 ANATHVVVLSVLGYDVNFNSLTESFTAREKHLLWNKKLHVVRSQWLEDCLAKEQKSEEYE 572
++ THV V S R+ +V+ +W+ +C + E +
Sbjct: 844 SSVTHVFV----------EDNDTSAIVRDTKAYKQISTKIVKCKWIGECFRNGRICEITD 893
Query: 573 YSL 575
Y +
Sbjct: 894 YLI 896
>gi|189028043|sp|A8N936.2|DNLI4_COPC7 RecName: Full=DNA ligase 4; AltName: Full=DNA ligase IV; AltName:
Full=Polydeoxyribonucleotide synthase [ATP] 4
Length = 1025
Score = 129 bits (323), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 108/362 (29%), Positives = 179/362 (49%), Gaps = 30/362 (8%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLII 122
+++ K ++ +ENR EG+V+K +K+ R+ W+K+KPEY+ G +DVL++
Sbjct: 428 GETANDIRKRMEQVMENRGEGLVIKHPKAKYILNGRNTDWIKVKPEYMDNMGETVDVLVV 487
Query: 123 GGYYGSGRRGGEVAQFLVALAE--RPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPY 180
G YGSG+RGG V+ + A+ + RP D P ++ SF R+GTGLS D V + KP+
Sbjct: 488 AGNYGSGKRGGGVSTLICAVMDDRRPDSDDEP-KYSSFVRIGTGLS--FADYVWVRSKPW 544
Query: 181 FRKYEYPKRAPPSFYQVTNNSKE-RPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLR 239
K PK PP F Q +E + DV++E PE S IL + + S+ + +++R
Sbjct: 545 --KVWDPKN-PPEFLQTAKKGQEDKGDVYLE-PEDSFILKVKA-AEITPSDQYHMGFTMR 599
Query: 240 FPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKN 299
FPR +R D DC+ E + S +K ++ G+ RK K
Sbjct: 600 FPRALAIRDDLSIADCMTATEVFESLKSER--KRKMEDDAGIT-------TKKRKTTVKK 650
Query: 300 VSIVPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDS----LHKMVVENGGTFSMN 355
V+++P + ++ + +T IF+ M F + P + + ++ L K + NGGT S
Sbjct: 651 VALLP-EYSGPNLKKVAVKTDIFNGMKFVVFSDPKSRTGEADKKELMKTIHANGGTCSQI 709
Query: 356 LNNS----VTHCVAADNKGLKYEAAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDS 411
+N + V + + LK K DVI SW+ D + + + KY+ H ++
Sbjct: 710 VNKNSEAIVIYGGSITPYDLKLVIDKGIHDVIKPSWITDSVTLGEPAPFKKKYFFHATEE 769
Query: 412 SK 413
K
Sbjct: 770 RK 771
>gi|74629204|sp|Q7Z7W5.1|DNLI4_COPCI RecName: Full=DNA ligase 4; AltName: Full=DNA ligase IV; AltName:
Full=Polydeoxyribonucleotide synthase [ATP] 4
gi|30984133|dbj|BAC76766.1| DNA ligase IV [Coprinopsis cinerea]
gi|62241054|dbj|BAD93669.1| DNA ligase IV [Coprinopsis cinerea]
Length = 1025
Score = 129 bits (323), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 108/362 (29%), Positives = 179/362 (49%), Gaps = 30/362 (8%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLII 122
+++ K ++ +ENR EG+V+K +K+ R+ W+K+KPEY+ G +DVL++
Sbjct: 428 GETANDIRKRMEQVMENRGEGLVIKHPKAKYILNGRNTDWIKVKPEYMDNMGETVDVLVV 487
Query: 123 GGYYGSGRRGGEVAQFLVALAE--RPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPY 180
G YGSG+RGG V+ + A+ + RP D P ++ SF R+GTGLS D V + KP+
Sbjct: 488 AGNYGSGKRGGGVSTLICAVMDDRRPDSDDEP-KYSSFVRIGTGLS--FADYVWVRSKPW 544
Query: 181 FRKYEYPKRAPPSFYQVTNNSKE-RPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLR 239
K PK PP F Q +E + DV++E PE S IL + + S+ + +++R
Sbjct: 545 --KVWDPKN-PPEFLQTAKKGQEDKGDVYLE-PEDSFILKVKA-AEITPSDQYHMGFTMR 599
Query: 240 FPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKN 299
FPR +R D DC+ E + S +K ++ G+ RK K
Sbjct: 600 FPRALAIRDDLSIADCMTATEVFESLKSER--KRKMEDDAGIT-------TKKRKTTVKK 650
Query: 300 VSIVPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDS----LHKMVVENGGTFSMN 355
V+++P + ++ + +T IF+ M F + P + + ++ L K + NGGT S
Sbjct: 651 VALLP-EYSGPNLKKVAVKTDIFNGMKFVVFSDPKSRTGEADKKELMKTIHANGGTCSQI 709
Query: 356 LNNS----VTHCVAADNKGLKYEAAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDS 411
+N + V + + LK K DVI SW+ D + + + KY+ H ++
Sbjct: 710 VNKNSEAIVIYGGSITPYDLKLVIDKGIHDVIKPSWITDSVTLGEPAPFKKKYFFHATEE 769
Query: 412 SK 413
K
Sbjct: 770 RK 771
>gi|145541123|ref|XP_001456250.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124424061|emb|CAK88853.1| unnamed protein product [Paramecium tetraurelia]
Length = 739
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 156/322 (48%), Gaps = 32/322 (9%)
Query: 43 SQLRSQIMAADQTGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGK 102
S L+ I+ E + + +E+ + F IE EGI++K + S++ P +RS K
Sbjct: 422 SLLQRIIVPIPNQLEVVQAATIKSFEELIQQFDMAIERNQEGIIIKQMDSQYLPNERSTK 481
Query: 103 WLKLKPEYIRAGSD-LDVLIIGGYYGSGRRGGE-------VAQFLVALAERPAPDTYPRR 154
W+K+K +Y+ +D D+L+IGGY+G+ E + FL+ LA++ +
Sbjct: 482 WVKMKGDYVENMTDNCDLLVIGGYFGTQSHRVETFDEFDRITHFLMGLAQKIDKNQPTNS 541
Query: 155 FI-SFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE 213
I F +VGTG +D EL + KL+ ++ K + P P ++ N +RPDV+I +P
Sbjct: 542 VILPFVKVGTGFTDNELSTIRNKLRNHWIKKQKPNYIPQNWNPGVN---DRPDVYINNPA 598
Query: 214 KSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGT-- 271
SII + + +S F Y+LRFPR + R DK W++ + Q +++ S T
Sbjct: 599 HSIIFEVKA-AEITKSNTFPTDYTLRFPRCYKTRMDKDWYEMMTTQDLSSMINDSQYTKN 657
Query: 272 --TQKGKEYGGLQ-------DDKPKQFRSSRK-------GEKKNVSIVPSHFLQTDVSDI 315
+ KE Q +D+P + RK K ++I+ + + D +I
Sbjct: 658 LKKKNDKEGNDKQTDDEVENEDRPMRQAKERKQPLRKGGAHSKQITIM-TEYQGLDPRNI 716
Query: 316 KGETSIFSDMVFYFVNVPPAYS 337
E+++F FY VN+ Y+
Sbjct: 717 TKESNLFVGCEFYIVNLEEDYN 738
>gi|452986474|gb|EME86230.1| hypothetical protein MYCFIDRAFT_132548 [Pseudocercospora fijiensis
CIRAD86]
Length = 967
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 111/396 (28%), Positives = 188/396 (47%), Gaps = 44/396 (11%)
Query: 63 VAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLI 121
A VDE + + EG+VLK+ S + R+ W+K+KPEY+ G LD ++
Sbjct: 458 TASKVDET---LRRVVAEASEGLVLKNPRSLYHLNARNDDWIKVKPEYMTEFGESLDCIV 514
Query: 122 IGGYYGSGRRGGEVAQFLVAL-----AERPAPDTYPRRFISFCRVGTGLSDEELDAVVTK 176
+GGYYGSG+RGG ++ FL L + PD P++ +SF +VG G S + +
Sbjct: 515 VGGYYGSGKRGGGLSSFLCGLYVPSQKKEIQPDINPQKTLSFFKVGGGFSASDYAQIKHM 574
Query: 177 LKPYFRKYEYPKRAPPSFYQVTNN---SKERPDVWIESPEKSIILSITSDIRTIRSEVFS 233
+ + ++ K+ P + ++ ERPDVWI+ PE S ++S+ + S+ F+
Sbjct: 575 TEGKWNDWDR-KKPPFDWVELGGGMVKQYERPDVWIK-PEDSFVVSVKA-ASVGASDQFA 631
Query: 234 APYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSR 293
++LRFPR ++R DK W L F+EL Q KE ++ D+ ++ R ++
Sbjct: 632 CGFTLRFPRFKKLRTDKSWQQALSHDDFIEL----KTKAQNEKEEKKMKMDESRRGRKTK 687
Query: 294 KGEKKNVSIVPSHFLQTDVSDIKGE-----TSIFSDMVFYFVNVPP---AYSLDSLHKMV 345
K +K+ V + D+K T +F + F+ + P S L ++V
Sbjct: 688 KRKKEIV------IQGQEEGDLKTPYAGPVTKVFEGLSFFIMTEAPKPIKKSKAELEQLV 741
Query: 346 VENGGTFSMNLNNSVTHCVAADNKGLKYEAAKRRG--DVIHYSWVLDCCSQKKLLQLQP- 402
NGG + + T V AD +K + K+ +++ SW+LDC Q +L +P
Sbjct: 742 KANGGQIVASHKDPKTILV-ADRNVVKVASVKKSDNRNIVKPSWLLDCIKQSELDVGRPT 800
Query: 403 -------KYYLHLSDSSKKKLQEEVDEFSDLYFWDL 431
+ + + + K + VDE+ D Y D+
Sbjct: 801 LLLPLEPHHLEYTQSADQGKFDDNVDEYGDSYARDV 836
>gi|358399367|gb|EHK48710.1| hypothetical protein TRIATDRAFT_83609 [Trichoderma atroviride IMI
206040]
Length = 994
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 128/489 (26%), Positives = 213/489 (43%), Gaps = 54/489 (11%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLII 122
A + D +E +E + N EG+VLK+ S + R+ WLK+KPEY+ G LD +II
Sbjct: 481 AISADAIEPLLREVVANASEGLVLKNPRSMYRLNSRNDDWLKVKPEYMSEFGESLDCVII 540
Query: 123 GGYYGSGRRGGEVAQFLVAL---AERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 179
GGYYGSG+RGG ++ FL L +P + SF +VG G E+ + +
Sbjct: 541 GGYYGSGKRGGILSSFLCGLRVTQNHIQAGAHPEKCFSFFKVGGGFRTEDYAEIRHRTDG 600
Query: 180 YFRKYEYPKRAPPSFYQVTNNSK---ERPDVWIESPEKSIILSITSDIRTIRSEVFSAPY 236
+ +++ PK P + ++ ERPD+WI K ++ S+ F+ +
Sbjct: 601 KWMEWD-PKNPPSEYIELGGGDAKQYERPDMWIRP--KDSVVVSVKAASVGPSDQFARGF 657
Query: 237 SLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGE 296
+LRFPR R+R D+ W L ++ F EL T+ + ++D + R + K
Sbjct: 658 TLRFPRFRRLRLDRSWDTALSLEEFQELKQRVE--TELKQMEMTVEDRR----RKNPKRI 711
Query: 297 KKNVSIVPSHFLQTDVSDIKGETS-IFSDMVFYFVN---VPPAYSLDSLHKMVVENGGTF 352
KK + I + +GE S +F + F ++ P + L ++ ENGG+
Sbjct: 712 KKELVIAGD---DAAPPEFEGEKSKLFERLEFCVLSESLKPSKKTKAQLESIIKENGGSI 768
Query: 353 SMNLNNSVTHCVAADNKGLKYEAAKRRGDV--IHYSWVLDCCSQKK---LLQLQPKYYLH 407
S + D K +K + + GDV I W+ DC Q LL + ++ H
Sbjct: 769 SQRAAAGTKMVLIGDKKVVKVASLMKEGDVDIIRPIWIKDCLDQPNGGFLLPYEERHLFH 828
Query: 408 LSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNVDRSEDPKTID---------YYKKK 458
+D D + Y D + +++++L N+ + ED ++ D + K
Sbjct: 829 ATDGLIDSASLNTDPLGESYACDTSVDELREVLQNMPKLEDAESFDKMLFLDQLEQHGKD 888
Query: 459 YCPQDKWSCFHGCCIYFY---HSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNLAN- 514
+ + F C + FY + E + WE I + GG +L +
Sbjct: 889 FTTLRSF-MFSQCRVLFYLADGAMESVKDKWERF-----------IRYGGGSCSQDLEDQ 936
Query: 515 -ATHVVVLS 522
TH+VVL
Sbjct: 937 SVTHIVVLG 945
>gi|367050110|ref|XP_003655434.1| hypothetical protein THITE_2080045 [Thielavia terrestris NRRL 8126]
gi|347002698|gb|AEO69098.1| hypothetical protein THITE_2080045 [Thielavia terrestris NRRL 8126]
Length = 1040
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 146/563 (25%), Positives = 253/563 (44%), Gaps = 80/563 (14%)
Query: 63 VAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLI 121
A + D +E ++ + EG+VLK+ S+++ R+ W+K+KPEY+ G LD ++
Sbjct: 505 TATSADAIEPLLRKVVAEASEGLVLKNPRSRYQLNSRNNDWIKVKPEYMSEFGESLDCVV 564
Query: 122 IGGYYGSGRRGGEVAQFL--VALAE---RPAPDTYPRRFISFCRVGTGLSDEELDAVVTK 176
IGGYYGSGRRGG ++ FL V ++E + + +SFC+VG G E+ +
Sbjct: 565 IGGYYGSGRRGGTLSSFLCGVRVSENFVKSGAAASREKCLSFCKVGGGFKAEDYGEIRHH 624
Query: 177 LKPYFRKYEYPKRAPPS-FYQVTNNSK---ERPDVWIESPEKSIILSITSDIRTIRSEVF 232
+ +R ++ PPS F ++ + ERPDVWI P +S++LS+ + S+ F
Sbjct: 625 TEGKWRDWDAAN--PPSEFIELGGGERLQYERPDVWIR-PSESVVLSVKA-ASFAPSDQF 680
Query: 233 SAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSS 292
+ ++LRFPR ++R DK W +DV L Q+ KE ++ + K R
Sbjct: 681 ATGWTLRFPRFRKLRLDKAWDAAMDVDECEAL---RTKVKQEEKERKAMEMESRK--RRP 735
Query: 293 RKGEKKNVSI---------VPSHFLQTDVSDIKGETS-IFSDMVFYFVN---VPPAYSLD 339
K +K+ + I + + D+K S +F + F ++ P +
Sbjct: 736 TKRQKRELVIAGAADPAATAATATATAEFLDVKTPRSELFRGLDFCVLSEMLRPRKMTKP 795
Query: 340 SLHKMVVENGGTFSMNLNNSVTHCVAADNKGLKYEAAKRRG--DVIHYSWVLDCCSQKK- 396
L K++ ENGG ++ + AD +K + K+ G D++ WVLDC Q
Sbjct: 796 ELEKLLKENGGRIHQTVDKGSGMILLADKNVVKVASLKKAGDADIVRPKWVLDCLEQGGG 855
Query: 397 ---LLQLQPKYYLHLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNVDRSEDPKTID 453
LL + + L ++ ++ +E D++ D Y D+ + +++ +L +D D +
Sbjct: 856 EGYLLPFEEGHLLFATEEMRRVAEENTDQYGDSYARDVGIDELRAILDAMDMP-DGGGAE 914
Query: 454 YYKKKYCPQ----------DKWSCFHGCCIYFYHSTEPLSPDWEVLLGLALRRLKLEISF 503
+ ++ Q K F C +YF + P+ L RL + F
Sbjct: 915 FDVSQFLDQLEEHGNGLEDLKSFMFRRCRMYF--ALGDGVPETTAL------RLGNYVKF 966
Query: 504 HGGKVCNNLAN--ATHVVVLS----------VLGYDVNFNSLTESFTAREKHLLWNKKLH 551
G+V + + + THVVV+ VL DV + + R
Sbjct: 967 GSGEVADGVEDEKITHVVVVGGEQDTAASEKVLAADVRYRVSSRRAVPR----------- 1015
Query: 552 VVRSQWLEDCLAKEQKSEEYEYS 574
+V S+W+EDC + +E Y+
Sbjct: 1016 IVSSRWVEDCWKEGTLVDEEAYA 1038
>gi|405119312|gb|AFR94085.1| DNA ligase 4 [Cryptococcus neoformans var. grubii H99]
Length = 1069
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/375 (25%), Positives = 186/375 (49%), Gaps = 34/375 (9%)
Query: 69 EVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIGGYYG 127
++ + + +E + EG+V+K ++ R W+K+KPEY + G +L+VL++GG++G
Sbjct: 434 DIRDYLERVVETKGEGLVVKKTDVIYQTNSRGYDWIKVKPEYSDQMGENLEVLVLGGWWG 493
Query: 128 SGRRGGEVAQFLVALAERPAPDTYPRR--FISFCRVGTGLSDEELDAVVTKLKPYFRKYE 185
G R G++++ L L E+ D + F +FC +G+G+S + + ++ K K +++ ++
Sbjct: 494 KGGRSGKISRLLCGLREQAFDDGTVEKPSFKTFCSIGSGMSYSDYEWILNKHKMHWKPFD 553
Query: 186 YPKRAPPSFYQVTN-NSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRID 244
+ PP F ++ + ++PDV+IE PE S ++ + + + + + ++LRFPR
Sbjct: 554 --RSNPPPFMKLGSVGLDDKPDVYIE-PENSFVIEVKA-AEIVPAGGYGIGFTLRFPRCK 609
Query: 245 RVRYDKPWHD-CLDVQSFVELVHSSNGTTQKGKEYGGLQD-----------DKPKQFRSS 292
+ YDK D LD +S + +S K + + G+++ +PK+
Sbjct: 610 YIYYDKNSRDYALDDESKERDMWTSMSVDGKSRIFHGIRELTERVDFLDLFSRPKRSYDD 669
Query: 293 RKG---------EKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHK 343
+G + + + S+F +SD ETSIFSDM FY Y L
Sbjct: 670 SQGPRKKKKRKVVRSKKNHLISNFRGQKLSDADVETSIFSDMTFYIAKGTSDYPKADLEA 729
Query: 344 MVVENGGTFSM-NLNNSVTHCVAADNKGLKY---EAAKRRG-DVIHYSWVLDCCSQKKLL 398
+V ++G F+ L++ ++ D K Y A R G ++I W+ + +++ L
Sbjct: 730 LVHKHGADFTQAQLSDLSAIVISPDQKSQHYPLVRAQIRHGVNIIKPEWIFESIARRTAL 789
Query: 399 QLQPKYYLHLSDSSK 413
L ++ + S+ ++
Sbjct: 790 PLLKEFLVFASEEAQ 804
>gi|169614756|ref|XP_001800794.1| hypothetical protein SNOG_10525 [Phaeosphaeria nodorum SN15]
gi|121935152|sp|Q0UCI9.1|DNLI4_PHANO RecName: Full=DNA ligase 4; AltName: Full=DNA ligase IV; AltName:
Full=Polydeoxyribonucleotide synthase [ATP] 4
gi|111060799|gb|EAT81919.1| hypothetical protein SNOG_10525 [Phaeosphaeria nodorum SN15]
Length = 990
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 125/489 (25%), Positives = 218/489 (44%), Gaps = 48/489 (9%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLII 122
AH+ E+E ++ + EG+VLK+ S + DR+ W+K+KPEY+ G LD +++
Sbjct: 477 AHSHTEIEPALRKVVAESSEGLVLKNPRSMYRLNDRNADWMKVKPEYMSEFGESLDCIVV 536
Query: 123 GGYYGSGRRGGEVAQFLVALA----ERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLK 178
GGY+GSG RGG + FL AL +P Y + + SF +VG G S E+ A+ + +
Sbjct: 537 GGYFGSGHRGGAHSSFLCALLLNKDAKPGDADYEKCW-SFFKVGGGFSREDYAAIRGRTE 595
Query: 179 PYFRKYEYPKRAPPSFY---QVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP 235
++ ++ P+R PP N ERPD WI P S++L + S+ F
Sbjct: 596 GKWKDWD-PRRPPPIIELGGHEQNRQHERPDQWIH-PSDSVVLECKA-ASVEGSDKFRFN 652
Query: 236 YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKG 295
+LRFPR +R DK W L + F E+ + +E + + K R +
Sbjct: 653 LTLRFPRFRMLRTDKRWDQALSREEFYEI----KANVEYKREEKEKEFEIEKSRRKRTRT 708
Query: 296 EKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFVNV---PPAYSLDSLHKMVVENGGTF 352
KK + + S + T + ++ IF + FY + P S L +V NGG
Sbjct: 709 TKKPIVVAGSETITTPYA--GPQSKIFDGLSFYIMTEQLHPTKKSKVDLEALVKANGGRV 766
Query: 353 SMNLNNSVTHCVAADNKGLKYEAAKRR--GDVIHYSWVLDCCSQKK--------LLQLQP 402
+ + AD + +K + ++R +++ W+ D Q + LL +P
Sbjct: 767 VQRDSMEPNLVIVADKRLIKVASLEKRDTNNIVKPVWIQDTIQQNEVDNGALPYLLPFEP 826
Query: 403 -KYYLHLSDSSKKKLQEEVDEFSDLYFWDL-DLADIKQLLSNVDRSEDPKTIDYYKKKYC 460
++ +L ++ + D++ D Y D+ D+ +++++L D + K + ++ +
Sbjct: 827 NRHMFYLLGDNQLDYEANADDYGDSYARDIADVEEMRKILGATDPPQ--KRTKFDRESFL 884
Query: 461 PQ--DKWSCFHGCCIYFYHSTEPL-----SPDWEVLLGLALRRLKLEISFHGGKVC--NN 511
Q D Y + ST+ P W + LA ++ F GG++ +
Sbjct: 885 DQLEDHGDSLSHLKTYMFSSTKVAFRTSDDPVWTLRAQLAGNYIR----FGGGQITEDED 940
Query: 512 LANATHVVV 520
TH VV
Sbjct: 941 EEGVTHTVV 949
>gi|213405927|ref|XP_002173735.1| DNA ligase [Schizosaccharomyces japonicus yFS275]
gi|212001782|gb|EEB07442.1| DNA ligase [Schizosaccharomyces japonicus yFS275]
Length = 915
Score = 127 bits (318), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 172/346 (49%), Gaps = 27/346 (7%)
Query: 67 VDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGY 125
VD++++ KET+ + EG+V+K+ S + G+R+ W+K+KP Y+ G DLD LI+GGY
Sbjct: 417 VDDIDRALKETVIEKSEGLVIKNPTSPYTLGERTNDWIKVKPYYMEGFGEDLDCLIMGGY 476
Query: 126 YGSGRRGGEVAQFLVALAERPAPDTYP-RRFISFCRVGTGLSDEELDAVVTKLKPYFRKY 184
YG G R ++ FL L P +F SF RVG G + + ++ K + +
Sbjct: 477 YGRGNR-KHLSSFLCGLRVSKHDSKEPIEQFQSFFRVGGGFTRNDYASIREKTNG--KWH 533
Query: 185 EYPKRAPPSFYQVTNNSK--ERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
E+ A ++ + +K +PD+WI P SI+L I + T+ ++ FS ++LRFPR
Sbjct: 534 EWNDEA-FQYHILAGATKTVNKPDLWIR-PHDSIVLQIKA-AETVPTDKFSTGFTLRFPR 590
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSI 302
+ +R DK W L F+ L + + KE+ + K G++K +S
Sbjct: 591 LQHIRLDKDWRSALTFNEFLAL---NEQAKKIPKEHSRIHRKKKVVL-----GKRKRMSF 642
Query: 303 VPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPA-YSLDSLHKMVVENGGTFSMNLN-NSV 360
P + Q S +K E+++F +F+ + Y+ L K ++ + G +++ N
Sbjct: 643 PPEY--QQTGSPLKVESNLFEGFLFFVTALESKEYTKPMLEKEILSHKGKIQQSIDSNGR 700
Query: 361 THCVAADNKGLKYEAAKRRG--DVIHYSWVLDCCSQKKLLQLQPKY 404
V A+ L+ A RG ++ WV+ +++LL P+Y
Sbjct: 701 DLIVIANKPTLRTSLATTRGVKRIVRPEWVIKSIQEERLL---PEY 743
>gi|393240351|gb|EJD47877.1| ATP-dependent DNA ligase [Auricularia delicata TFB-10046 SS5]
Length = 1038
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 175/368 (47%), Gaps = 26/368 (7%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIR-AGSDLDVLII 122
H E+ ++ +E R EG+V+K S+++ R W+K+KPEY+ G +DVL++
Sbjct: 430 GHTAKEIRDALQKVMEERGEGLVIKHPDSQYQLNGRVSDWIKVKPEYMDDMGETVDVLVV 489
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
GG YGSG+RGG V+ F+ A+ E ++ +F R+G+G + D + + KP+
Sbjct: 490 GGNYGSGKRGGGVSTFVCAVIEDRDNSEDDTKYSTFVRIGSGFT--YGDYLSIRAKPW-- 545
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
+ K+ P ++ DV+++ PE+S ++ + + +++ + ++RFPR
Sbjct: 546 -KPWGKKGPSWLITAPTGQDDKADVYLD-PEESFVVKVKA-AEITKTDQYGMKLTMRFPR 602
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSI 302
R+R D W C+ +E+ S T++K K +D P + ++ K S
Sbjct: 603 AVRIRDDLDWTQCMTASDILEMTAS---TSKKRK-----AEDDP-EGSKKKRKTVKKPSA 653
Query: 303 VPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSL-DSLHKMVVENGGTFSMN-LNNSV 360
+ F D ++I + IF+ M F+ ++ P SL ++ ++GG F L V
Sbjct: 654 LSQAFKGADTTNILVTSDIFAGMKFHVLDNPRVVDQKKSLETLIKQHGGAFCQKPLAREV 713
Query: 361 THCV----AADNKGLKYEA---AKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSK 413
T +D K A + D++ S++ D + + L L KY+ H +
Sbjct: 714 TSVFRVFGGSDQKPPLRVANIINEDSSDILRPSYIFDSVERNERLPLSKKYFFHRAGGKS 773
Query: 414 KKLQEEVD 421
+ +EE +
Sbjct: 774 RTEEEEAE 781
>gi|336366657|gb|EGN95003.1| hypothetical protein SERLA73DRAFT_170894 [Serpula lacrymans var.
lacrymans S7.3]
gi|336379344|gb|EGO20499.1| hypothetical protein SERLADRAFT_452596 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1011
Score = 126 bits (317), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 97/353 (27%), Positives = 180/353 (50%), Gaps = 28/353 (7%)
Query: 69 EVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIGGYYG 127
+V + E + R EG+V+K S++ R+ W+K+KPEY+ G +DVL++GG YG
Sbjct: 432 DVREKMDEVMAARGEGLVIKHPDSEYVLNGRNKDWIKVKPEYMDNMGETVDVLVVGGNYG 491
Query: 128 SGRRGGEVAQFLVALAE--RPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYE 185
SG+R G V+ + A+ + + D ++ SF R+G+GL+ D + + KP+
Sbjct: 492 SGKRSGGVSTLICAVLDDRHSSNDDEELKYSSFVRIGSGLT--FADYIWVRQKPW---KL 546
Query: 186 YPKRAPPSFYQVTNNSK-ERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRID 244
+ +PP+F Q S+ ++ DV++E PE S +L + + TI S+ + +++RFPR
Sbjct: 547 WDPNSPPTFLQTAKRSQDDKGDVYLE-PEDSFMLKVKAAEITI-SDQYHLGFTMRFPRAL 604
Query: 245 RVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVP 304
+R D DC+ + +E N T++ ++ ++ D + K + S++P
Sbjct: 605 SIRDDLSIADCMTATAILE-----NLRTERKRK---MESDSSMSKKKKSKTKVAKPSMLP 656
Query: 305 SHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLD----SLHKMVVENGGTFSMNLNNSV 360
+ ++ I+ E++IF D+ F + P + + D L KM+ NGG+ + + N
Sbjct: 657 -EYQGLKLNSIEIESNIFEDIKFVVSSDPKSRTGDHDKKELMKMIHANGGSCAQVVTNQQ 715
Query: 361 THCVAADNKGLKYE----AAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLS 409
V Y+ K D+I W++DC ++ ++L L+ KY+ H +
Sbjct: 716 PSMVIYGGSTTPYDIRLLINKDTVDIIRPQWIVDCVARGEILPLKKKYFFHAT 768
>gi|383852714|ref|XP_003701870.1| PREDICTED: DNA ligase 4-like [Megachile rotundata]
Length = 894
Score = 126 bits (317), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 133/522 (25%), Positives = 225/522 (43%), Gaps = 65/522 (12%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGK-WLKLKPEYI-RAGSDLDVLIIG 123
N +E+ K F E+I N++EGIVLK+ +K++P R G K+K E+ D+D++I+G
Sbjct: 400 NSEELRKVFNESIRNKEEGIVLKECNNKYKPNVRDGSGCYKIKAEFSDDLVQDVDLIILG 459
Query: 124 GYYGSGRRGGEVAQFLVALAERPA-PDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
GYYG GR G + FL+ +A A P P F + V +GL E L + K ++
Sbjct: 460 GYYGEGRCIGLMKSFLMGVASPSAVPGENPSEFFAVVSVSSGLIMEALKDIWEMFKEKWQ 519
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
PP +E PD WI PE SIIL+I + T+ ++ + YSLRFPR
Sbjct: 520 TTCPANVIPP--------KRELPDKWIR-PEDSIILTIRASEMTVSND-YPTGYSLRFPR 569
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSI 302
+ +VR DKPW+ + + L+ + + K +D + RK +
Sbjct: 570 VMQVRTDKPWYSVCTTKELLSLIKDTRPIQKLTKREVDHEDTEESPKVKVRKSTQYLPQK 629
Query: 303 VPSHFLQTDV---SDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMNLNNS 359
+ + F + + + T +F D +N + + K++ ++ + + +
Sbjct: 630 LEAKFTKMETCEDTSTACLTRLFDDREICVINGNDELPKERIEKILSQHKAKVVQSPSKN 689
Query: 360 VTHCVAADNKGLKYEA---AKRRGDVIHYSWVLDCCSQKKLLQLQ---PKYYLHLSDSSK 413
+C+ N A ++ DV+ W ++ LQ P + +S+K
Sbjct: 690 -NYCIIVGNAKTARAANIIESKKYDVVTLDWFKRVTKEENWPCLQDFLPWDLIACRESTK 748
Query: 414 KKLQEEVDEFSDLYFWDLDLADIKQLLSNVDRSEDPKTIDYYKKKYCPQDK--------- 464
++L D++ D + D A+ + LLS+ + E+ T ++ C Q K
Sbjct: 749 QRLMLYYDDYYDSFTID---ANEESLLSSFKKIEEEGTA---QELDCAQMKEIDKELFDN 802
Query: 465 ----WSCFHGCCIYFYHSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNLANATHVVV 520
+S F G YF +PL+ LK+E F G + L ++ V
Sbjct: 803 GVSPYSIFRGIVAYF---DDPLNG------------LKVEFRFMAGTIKETLDDSVTHVF 847
Query: 521 LSVLGYDVNFNSLTESFTAREKHLLWNKKLHVVRSQWLEDCL 562
+S SL + +RE L VV+S+W+E C
Sbjct: 848 VSKGSVSPELQSLIKD-KSRE-------SLTVVKSEWIEKCF 881
>gi|307185188|gb|EFN71325.1| DNA ligase 4 [Camponotus floridanus]
Length = 891
Score = 126 bits (316), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 131/533 (24%), Positives = 228/533 (42%), Gaps = 57/533 (10%)
Query: 59 CWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDR-SGKWLKLKPEYI-RAGSD 116
C S + N +E+ + F E + + +EG+V+K K++P R G K+K EY D
Sbjct: 398 CRSSLISNREELIEAFNERLRDNEEGLVIKKHDMKYKPNVRDGGGCYKIKAEYSDNLVQD 457
Query: 117 LDVLIIGGYYGSGRRGGEVAQFLVALAERPA-PDTYPRRFISFCRVGTGLSDEELDAVVT 175
+D++I+GGYYG G+ G + F+V +A + + P R ++ V +G+ D+ L + T
Sbjct: 458 IDLIILGGYYGEGKYTGIIKSFMVGVAASTSNKEGNPSRLLAVVSVSSGIGDQMLRDLQT 517
Query: 176 KLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP 235
K ++ K E P+ VT KE+PDVWI PE SIIL I + IRS +
Sbjct: 518 KFASHWIK-ERPE-------NVTGPKKEQPDVWIR-PENSIILKIRA-TEMIRSNEYPIG 567
Query: 236 YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKG 295
YSLRFPR+ +R DKPW+ + LV + + K L D +K
Sbjct: 568 YSLRFPRVVDIRMDKPWYSPCTSSELLLLVKNKGMIQKLTKREATLHDVDEAPVAKLQKT 627
Query: 296 EKKNVSIVPSHFLQTDVSDIKGETSIFSDMV----FYFVNVPPAYSLDSLHKMVVENGGT 351
+N SI + + G+ + + ++ +N + + + +++ ++
Sbjct: 628 VSRNKSI--------EYNVYNGQIVLLTRLLDGKEICVINGTDELAKEQIEEILQQHSAR 679
Query: 352 FSMNLNNSVTHCVAADNKGLKYEAAKRRG--DVIHYSWVLDCCSQKK---LLQLQPKYYL 406
N N+ + +N+ ++ + G DV+ W +Q L P L
Sbjct: 680 IVQNPMNTTFCVIVGNNRTIRGKEVVDSGKYDVVTLDWFKRVTNQSNWASLGDFLPWELL 739
Query: 407 HLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNVDRSEDPKTIDYYKKKYCPQDKWS 466
D +K +L E DE+ D + D AD + L + D+ P + ++ DK
Sbjct: 740 CSRDKTKHRLTENYDEYYDNFIVD---ADEETLRRSFDKIGKPLADQFTVEQGKNLDKE- 795
Query: 467 CFHGCCIYFYHSTEPLSPDWEVLLGLALRR---LKLEISFHGGKVCNNLAN-ATHVVVLS 522
F + P S + ++G + K + F G + +N+ N TH+ V
Sbjct: 796 -------LFNENASPYSL-FRDIIGFFENQSCCAKFKFRFMSGMIKDNIDNFVTHIFVED 847
Query: 523 VLGYDVNFNSLTESFTAREKHLLWNKKLHVVRSQWLEDCLAKEQKSEEYEYSL 575
E+ T R + + +V+ +W+E+C Q + Y +
Sbjct: 848 -----------NETDTVRNLKVDDLTSVKIVKCKWIEECFRSGQLCDITNYLI 889
>gi|389745521|gb|EIM86702.1| ATP-dependent DNA ligase [Stereum hirsutum FP-91666 SS1]
Length = 1077
Score = 125 bits (315), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 97/361 (26%), Positives = 171/361 (47%), Gaps = 29/361 (8%)
Query: 62 LVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVL 120
+ EV + +E + +R EG+V+K S++ R+ W+K+KPEY+ G +DVL
Sbjct: 440 FIIKTAKEVREKMEEVMNDRGEGLVMKHPDSEYVLNGRNKDWIKVKPEYMDNMGETVDVL 499
Query: 121 IIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPY 180
+IGG YGSGRR G V+ L + + + P ++ +F RVG G S D + + KP+
Sbjct: 500 VIGGKYGSGRRAGGVSSILCGVLDDRYKEGEP-KYSTFVRVGAGFS--YTDYLWIRDKPW 556
Query: 181 FRKYEYPKRAPPSFYQVTNNS--KERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSL 238
EY PP+F QV + +++P++++E PE S I+ + + ++ + Y++
Sbjct: 557 ---KEYDPNNPPAFLQVAKSKTLEDKPELYLE-PEHSFIIKVKA-AEITPTDAYHIGYTM 611
Query: 239 RFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKK 298
RFPR +R D DC+ + + V S ++ + G + + R K
Sbjct: 612 RFPRALGIRDDLTVADCVTATALFDSVRSERKRKREEEMLG--------KPKKKRVKVAK 663
Query: 299 NVSIVPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLD----SLHKMVVENGGTFSM 354
I+ + TD+ D++ E+ +F M F V+ P + + D ++ K++ NGG
Sbjct: 664 KPLILQEYKGSTDLKDVQVESDLFEGMAFAVVSDPKSRTQDEDKKNILKLIRANGGKIVQ 723
Query: 355 NLNNSVTHCVAADNKGLKYE----AAKRRGDVIHYSWVLDCCS--QKKLLQLQPKYYLHL 408
N V D Y+ K D+I W+ +C + + + L KY+ H
Sbjct: 724 VAKNQPGLLVVYDGTTTPYDIKAIMKKDFHDIIRSKWIHECIAAGSRYSVPLTKKYFFHA 783
Query: 409 S 409
+
Sbjct: 784 T 784
>gi|409040486|gb|EKM49973.1| hypothetical protein PHACADRAFT_178599 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1036
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 96/371 (25%), Positives = 177/371 (47%), Gaps = 28/371 (7%)
Query: 69 EVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIGGYYG 127
+V ++ + + NR EG+++K GS++ R+ W+K+KPEY+ G +DVL++ G YG
Sbjct: 439 DVRQYMEIIMNNRGEGLIMKHPGSEYVLNGRNKDWIKVKPEYMDNMGETVDVLVVAGCYG 498
Query: 128 SGRRGGEVAQFLVALA--ERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYE 185
+GRR G V+ + A+ +R A D ++ +F R+G+GL+ D V + KP+ K
Sbjct: 499 TGRRSGGVSTLVCAVLDDQRAAGDDDGMKYRTFVRIGSGLT--FADYVWIRQKPW--KEW 554
Query: 186 YPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDR 245
PK+ PP +++ D +++ PE S I+ + + ++ + Y++RFPR
Sbjct: 555 NPKQPPPWLLTAKRGQEDKGDAYLK-PEDSFIIKVKA-AEITPTDQYHIGYTMRFPRAMM 612
Query: 246 VRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPS 305
+R D DC+ + E V S E + + RK K +++P
Sbjct: 613 IREDLGIEDCMTASAVFESVRS---------EKKRKAESGGGGSKKKRKATAKKPTVLPH 663
Query: 306 HFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDS----LHKMVVENGGTFSMNLNNSVT 361
+ D+ D+K E +F + + P + + +S L K++ NGG F +NN
Sbjct: 664 FNVAEDLKDVKVEGELFKEFTLLVASDPKSRTGESDRKELMKLIKANGGKFCQVINNRQG 723
Query: 362 HCVAA--DNKGLKYEAAK--RRG--DVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKK 415
A D + Y+ RG D++ W+ D ++ +L L KY +++ +
Sbjct: 724 ENTMAVYDGATIPYDIKMIVDRGTHDIVKPEWIRDSVARDELAPLTKKYLFFATEARRNT 783
Query: 416 LQEEVDEFSDL 426
+ + E +D+
Sbjct: 784 EEYSLAEGADV 794
>gi|194895415|ref|XP_001978248.1| GG19495 [Drosophila erecta]
gi|190649897|gb|EDV47175.1| GG19495 [Drosophila erecta]
Length = 927
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 121/436 (27%), Positives = 203/436 (46%), Gaps = 33/436 (7%)
Query: 31 DGICVCVHVYMLSQLRSQIMAADQTG--EPCWSLVAHNVDEVEKFFKETIENRDEGIVLK 88
+G + H Y+ + Q + +Q+G + + +V E + F++ +++ EGIVLK
Sbjct: 382 NGQSLLDHTYIQRAYKLQKLIVEQSGVLQLMRARKIGSVKEFNELFQQALDSHAEGIVLK 441
Query: 89 DLGSKWEPGDR-SGKWLKLKPEYIRAG-SDLDVLIIGGYYGSGRRGGEVAQFLVALAERP 146
GS++ PG R G W K K +YI+ ++ DVLIIG +Y R+ V FL+ + + P
Sbjct: 442 KQGSRYHPGVRLGGGWYKDKADYIKGLITEFDVLIIGAFYN--RKRTFVDSFLLGVLQ-P 498
Query: 147 APDTYPRRFISFCRVGTGLSDEELDAVVTK-LKPYFRKYEYPKRAPPSFYQVTNNSKER- 204
AP R F +G ++ + V+ LKP++ ++ PP ++ N +
Sbjct: 499 APPGSSNRPEVFS-IGVVANNTKQRGVLNHTLKPHW--HDVVNEPPPLWFHYKPNERSGC 555
Query: 205 PDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
PD+WIE P SIIL + + F+ SL FPR + R DKPW +C+ ++ F +L
Sbjct: 556 PDLWIE-PHNSIILQVKAADLAPNGAFFTRK-SLHFPRTEMKRDDKPWSECMTLKEFNDL 613
Query: 265 VHSSNGTTQKGKEYGGLQD--DKPKQFRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIF 322
S + K L+D K KQ R + E+ + + + + +V + +F
Sbjct: 614 CKGSLAIKKLNKRQLRLEDVTTKRKQMRMT-PSERSRLGLA-VYEKRYNVDPSVSSSKLF 671
Query: 323 SDMVFYFVNVPPA-YSLDSLHKMVVENGGTFSMN--LNNSVTHCVAADNKGLKYEAA--- 376
+ F ++ +S L ++ V+NGG N N+ C+A D L
Sbjct: 672 DGLSFCILSGSAGRHSKHQLQELAVKNGGCIVENPLPNDPKCFCIAGDETFLVKRLILQK 731
Query: 377 KRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEVDEFSDLYFWDLD---- 432
R D++ W+L C QK+ L+L+P+ + ++ ++ L E D D Y D+
Sbjct: 732 PRTCDIVRMEWLLRVC-QKQELELRPRDLIAATEPLQQDLAECFDRHGDSYSKDIANVEE 790
Query: 433 ----LADIKQLLSNVD 444
L DIK NVD
Sbjct: 791 LQDLLRDIKLTAENVD 806
>gi|391329203|ref|XP_003739065.1| PREDICTED: DNA ligase 4-like [Metaseiulus occidentalis]
Length = 741
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/327 (30%), Positives = 163/327 (49%), Gaps = 18/327 (5%)
Query: 68 DEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAG-SDLDVLIIGGYY 126
DE KF E N +EGIV+K + P +R WLKLK +Y+ G +DLDV+I+G YY
Sbjct: 423 DEALKFMNEATSNLEEGIVIKKADGPYVPNERDAGWLKLKRDYMNEGVADLDVIIVGAYY 482
Query: 127 GSGRRGGEVAQFLVALAERPAPDT-YPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYE 185
+G+ LVA+AE P + P+ F SF RV +GLS+ + ++ K ++ +
Sbjct: 483 AAGKTAIIYDSLLVAVAEDPETSSDPPKYFYSFGRVHSGLSEAFMKDLLGKTGDAWKPFN 542
Query: 186 YPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDR 245
K P++ ++++ + P+V IE P+ S+IL++ + + ++ F S+RFPR+
Sbjct: 543 RDK--CPTWLKMSSMA-NCPNVIIE-PKSSVILTVKA-AELVPTKSFMTECSMRFPRVSA 597
Query: 246 VRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSR-KGEKKNVSIVP 304
+R+DKPW DC+ +L + GT G L+ K +Q RS R + ++ + +
Sbjct: 598 LRFDKPWKDCMRYSELAKLYRETKGTMTAGDLKIDLETKK-EQVRSGRGRSPQRKIKVQL 656
Query: 305 SHFLQTDVSDIKGETSIFSDM-VFYFVNVPPAYSLDSLHKMVVENGGTFSMNLNNSVTHC 363
L T V +K + + + +F +V A L K V +GGT + L T
Sbjct: 657 ERKL-TPVKRVKSDFLLGKEFCIFAEKSVRSA-----LEKAVRRHGGTCVL-LPRPSTFM 709
Query: 364 VAADNKGLKYEAAKRRGDVIHY-SWVL 389
V AD + + DV SW L
Sbjct: 710 VVADRLSFRIKTILETRDVAKVSSWGL 736
>gi|195352416|ref|XP_002042708.1| GM17599 [Drosophila sechellia]
gi|194126739|gb|EDW48782.1| GM17599 [Drosophila sechellia]
Length = 671
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 115/411 (27%), Positives = 197/411 (47%), Gaps = 31/411 (7%)
Query: 38 HVYMLSQLRSQIMAADQTGEPCWSLVAHNVDEVEKF---FKETIENRDEGIVLKDLGSKW 94
H Y+ + Q + +Q+G + A + V++F F++ +++ EGIVLK GS++
Sbjct: 272 HTYIQRAYKLQKLIVEQSGV-LQLMRARKIGSVQEFNELFQQALDSHAEGIVLKKQGSRY 330
Query: 95 EPGDR-SGKWLKLKPEYIRAG-SDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYP 152
+PG R G W K K +YI+ ++ DVLIIG +Y R+ V FL+ + + PAP
Sbjct: 331 QPGVRLGGGWYKDKADYIKGLITEFDVLIIGAFY--NRKRTFVDSFLLGVLQ-PAPPGSS 387
Query: 153 RRFISFCRVGTGLSDEELDAVVT-KLKPYFRKYEYPKRAPPSFYQVTNNSKER---PDVW 208
R F +G ++ + V+ LKP++ ++ PP ++ KER PD+W
Sbjct: 388 NRPEVF-SIGVVANNTKQRGVLNHTLKPHW--HDVVNEPPPLWFHY--KPKERAGCPDLW 442
Query: 209 IESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSS 268
IE P+ S+IL + + F+ SL FPR + R DKPW +C+ ++ F +L
Sbjct: 443 IE-PQNSVILQVKAADLAPNGAFFTRK-SLHFPRTEMKRDDKPWSECMTLKEFNDLCQGP 500
Query: 269 NGTTQKGKEYGGLQD--DKPKQFRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMV 326
+ K L+D K KQ R + E+ + + + + D S + +F +
Sbjct: 501 LAIKKLNKRQLRLEDVTTKRKQMRMT-PSERSRLGLA-VYEKRYDASTSASTSKLFDGLS 558
Query: 327 FYFVNVPPA-YSLDSLHKMVVENGGTFSMN--LNNSVTHCVAADNKGLKYEAA---KRRG 380
F ++ +S L ++ V+NGG N N+ C+A D L R
Sbjct: 559 FCILSGSAGRHSKHQLQELAVKNGGCIVENPLPNDPKCFCIAGDETFLVKRLILQQPRTC 618
Query: 381 DVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEVDEFSDLYFWDL 431
D++ W+L C QK+ L+L+P+ + ++ ++ L E D+ D Y D+
Sbjct: 619 DIVRMEWLLRVC-QKQELELRPRDLIAATEPLQQDLAECFDQHGDSYTKDI 668
>gi|270014276|gb|EFA10724.1| ligase4-like protein [Tribolium castaneum]
Length = 631
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 97/372 (26%), Positives = 173/372 (46%), Gaps = 37/372 (9%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIR-AGSDLDVLII 122
A ++ ++ +++N +EGIV+KD S ++ DR+ W K+K EY DLDV+++
Sbjct: 162 ASSLGDIVDALNSSVDNNEEGIVVKDTKSVYKCSDRNSGWFKVKMEYFDDVVHDLDVILM 221
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPY-- 180
GG Y SG+ + F V ++ +TY +SF R+ +GLSDE+LD + K +
Sbjct: 222 GGCYSSGK----LNSFFVGVSS--GANTY----LSFGRISSGLSDEQLDLLAEKFQSKGV 271
Query: 181 -FRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSI--TSDIRTIRSEVFSAPYS 237
F+ + F ++RPD++IE P S IL I T IRT V PY+
Sbjct: 272 DFKSFSTESEGKLQF------GRDRPDLYIE-PHNSCILQIRATELIRTTNDTV-KCPYT 323
Query: 238 LRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEK 297
LRFPR+ ++R DKP +C + +EL + + K + L + K +R +K
Sbjct: 324 LRFPRVLKIRDDKPVDECFSINELLELAGQNKPVIKLNKRHIELSEISAK----ARPAKK 379
Query: 298 KNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMNLN 357
+ ++ S L + G+ FY + + LD ++ + + GG S +
Sbjct: 380 IKLEVIKSDLLTESGDFLTGKR-------FYVDSGTQKWGLDDIYHAIKKAGGEISYRVE 432
Query: 358 NSVTHCVAADNKGLKYEAAKR--RGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKK 415
+V + + E K+ D++H W+ ++L+ +P + + ++
Sbjct: 433 PNVDVILVSKVGKKVAELMKQPNHFDIVHVDWLHRVMEYRELVDYKPGEMFYKGTNFRRD 492
Query: 416 LQEEVDEFSDLY 427
+ + D F D +
Sbjct: 493 VGSDSDRFGDSF 504
>gi|242763732|ref|XP_002340633.1| DNA ligase, putative [Talaromyces stipitatus ATCC 10500]
gi|218723829|gb|EED23246.1| DNA ligase, putative [Talaromyces stipitatus ATCC 10500]
Length = 736
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/239 (33%), Positives = 131/239 (54%), Gaps = 17/239 (7%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLII 122
A E+E ++ +E EG+VLK+ S + +R W+K+KPEY+ G LD++II
Sbjct: 466 ATTAAEIEPILRKVVEEASEGLVLKNPRSPYRLNERHDDWMKVKPEYMTEFGEALDLVII 525
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVV----TKLK 178
GGYYGSG+RGG ++ +L L + + SFC+VG G + + + K K
Sbjct: 526 GGYYGSGKRGGALSSYLCGLRVDDPNGSNSMKCYSFCKVGGGFTAADYANIRHHTDGKWK 585
Query: 179 PYFRKYEYPKRAPPSFYQVTN---NSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP 235
P+ PK+ P F ++ + KE+PD WI P++S+++ + + ++ SE F
Sbjct: 586 PW-----NPKKPPTEFIELAGGEASQKEKPDEWIR-PDESVVICVKAASVSV-SEEFRIG 638
Query: 236 YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRK 294
+LRFPR ++R DK W L VQ F++L S+ QK K++ + + + K+ ++S K
Sbjct: 639 LTLRFPRFKKLRMDKDWKSALSVQEFLDL-KSNVEKEQKEKQF-TVDNSRRKRIKTSTK 695
>gi|91089797|ref|XP_968624.1| PREDICTED: similar to ligase IV, DNA, ATP-dependent, partial
[Tribolium castaneum]
Length = 716
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 97/372 (26%), Positives = 173/372 (46%), Gaps = 37/372 (9%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIR-AGSDLDVLII 122
A ++ ++ +++N +EGIV+KD S ++ DR+ W K+K EY DLDV+++
Sbjct: 247 ASSLGDIVDALNSSVDNNEEGIVVKDTKSVYKCSDRNSGWFKVKMEYFDDVVHDLDVILM 306
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPY-- 180
GG Y SG+ + F V ++ +TY +SF R+ +GLSDE+LD + K +
Sbjct: 307 GGCYSSGK----LNSFFVGVSS--GANTY----LSFGRISSGLSDEQLDLLAEKFQSKGV 356
Query: 181 -FRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSI--TSDIRTIRSEVFSAPYS 237
F+ + F ++RPD++IE P S IL I T IRT V PY+
Sbjct: 357 DFKSFSTESEGKLQF------GRDRPDLYIE-PHNSCILQIRATELIRTTNDTV-KCPYT 408
Query: 238 LRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEK 297
LRFPR+ ++R DKP +C + +EL + + K + L + K +R +K
Sbjct: 409 LRFPRVLKIRDDKPVDECFSINELLELAGQNKPVIKLNKRHIELSEISAK----ARPAKK 464
Query: 298 KNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMNLN 357
+ ++ S L + G+ FY + + LD ++ + + GG S +
Sbjct: 465 IKLEVIKSDLLTESGDFLTGKR-------FYVDSGTQKWGLDDIYHAIKKAGGEISYRVE 517
Query: 358 NSVTHCVAADNKGLKYEAAKR--RGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKK 415
+V + + E K+ D++H W+ ++L+ +P + + ++
Sbjct: 518 PNVDVILVSKVGKKVAELMKQPNHFDIVHVDWLHRVMEYRELVDYKPGEMFYKGTNFRRD 577
Query: 416 LQEEVDEFSDLY 427
+ + D F D +
Sbjct: 578 VGSDSDRFGDSF 589
>gi|336273572|ref|XP_003351540.1| hypothetical protein SMAC_00082 [Sordaria macrospora k-hell]
gi|380095820|emb|CCC05866.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1825
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 108/426 (25%), Positives = 202/426 (47%), Gaps = 51/426 (11%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLII 122
A + D +E + + EG+VLK+ S++ R+ W+K+KPEY+ G +D +++
Sbjct: 1356 ATSPDAIEPLLRRVVAEASEGLVLKNPRSRYSLNSRNNDWIKVKPEYMSEFGESMDCVVV 1415
Query: 123 GGYYGSGRRGGEVAQFLVALAE-----RPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
GGY+GSGRRGG ++ FL L + +SF +VG GL E+ +
Sbjct: 1416 GGYFGSGRRGGTLSSFLCGLRVSQNLIESGKAATAEKCLSFFKVGGGLKAEDYAEIRHHT 1475
Query: 178 KPYFRKYEYPKRAPPSFYQVTNNSK----ERPDVWIESPEKSIILSITSDIRTIRSEVFS 233
+ ++ ++ PP+ Y + E+PDVWI P S+++S+ + T ++ F+
Sbjct: 1476 EGKWQDWDAAN--PPTEYIELGGGERLQYEKPDVWIR-PSDSVVISVKAASIT-PTDQFA 1531
Query: 234 APYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSR 293
++LRFPR ++R D+ W LD+ F L Q+ K+ + + ++ + +
Sbjct: 1532 MGWTLRFPRFRKLRLDRTWDSALDMDEFEVLRSKIKDQEQERKK----MEMESRKRKPAT 1587
Query: 294 KGEKKNVSIV----PSHFLQTDVSDI-------KGETSIFSDMVFYFVN---VPPAYSLD 339
K +K++ I PS L + + + T +F + F ++ P +
Sbjct: 1588 KRARKDLVIAGMSNPS--LSSSATPFVAPRATREASTHLFIGLDFCVLSESLKPNKMAKP 1645
Query: 340 SLHKMVVENGGTFSMNL-----NNSVTHCVAADNKGLKYEAAKR---RGDVIHYSWVLDC 391
+L K++ ++GG + + AD +K + K+ D+I WV DC
Sbjct: 1646 ALEKLIKDHGGRIYQQVVDRSGDQEKIIIPIADKNVVKVASLKKAHPEMDIIRPKWVFDC 1705
Query: 392 CSQKK-------LLQLQPKYYLHL-SDSSKKKLQEEVDEFSDLYFWDL-DLADIKQLLSN 442
+Q LL +P + H S+ ++++ +E VD F D Y DL D+ ++K ++
Sbjct: 1706 LAQPMSRKEKGYLLPFEPIHIFHAGSEQTEQEAEEAVDRFGDSYARDLADIDELKAVMEG 1765
Query: 443 VDRSED 448
+D+S++
Sbjct: 1766 MDQSDE 1771
>gi|403172161|ref|XP_003889352.1| hypothetical protein PGTG_21909 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375169734|gb|EHS63955.1| hypothetical protein PGTG_21909 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 1005
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 97/367 (26%), Positives = 165/367 (44%), Gaps = 31/367 (8%)
Query: 57 EPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGS 115
E C+S+ + +++ F++ +E EG+++K L SK+ R+ W K+KP+Y+ G
Sbjct: 437 EFCYSVRGKDTQDIKASFEKILEESGEGLIIKRLDSKYRVNARTDDWYKVKPDYMDELGE 496
Query: 116 DLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPR--RFISFCRVGTGLSDEELDAV 173
+VL +G ++G G+RGG FLVAL + D R+ + CRVGTGL+ +E +
Sbjct: 497 TFEVLAVGAFWGRGKRGGTFGSFLVALVDNENSDPLQGIFRYKTLCRVGTGLTTDETTQI 556
Query: 174 VTKLKPYFRKYEYPKRAP---PSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSE 230
+TKL+ + ++ K+ P P + + S + PDVW + S +L+I I S
Sbjct: 557 MTKLEGKYSNWD--KKRPELNPDWLDIGKGSGQTPDVWWHWKD-SFVLTIKG-TEIINSY 612
Query: 231 VFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFR 290
+ +S+RFPR R ++ DC+ Q + + + + G+ G
Sbjct: 613 AYGCQFSIRFPRSIRFDMERDIGDCMPYQELLGIANQLQDKNKLGENLSG---------- 662
Query: 291 SSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFVNV--PPAYSLDSLHKMVVEN 348
RK ++ +S S + SD IF F+ + A S L M+ N
Sbjct: 663 HVRKRKRNELSQPTSSLMPLKRSD---SHKIFYGAEFWVLQGLEDTAESKSDLEVMLNRN 719
Query: 349 GGTFSMNLNNSVT----HCVAADNKGLKYEAAKRRG-DVIHYSWVLDCC-SQKKLLQLQP 402
GG + C+ E A R G ++H WV D + K++ P
Sbjct: 720 GGKIIHTVPRPAPDREHFCITRRTDFWDAEKAIRHGLQLVHPQWVHDSMEAGYKIVVTSP 779
Query: 403 KYYLHLS 409
KY ++ +
Sbjct: 780 KYAVNTA 786
>gi|91089809|ref|XP_968774.1| PREDICTED: similar to ligase IV, DNA, ATP-dependent [Tribolium
castaneum]
gi|270014275|gb|EFA10723.1| ligase4-like protein [Tribolium castaneum]
Length = 847
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 97/372 (26%), Positives = 173/372 (46%), Gaps = 37/372 (9%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIR-AGSDLDVLII 122
A ++ ++ +++N +EGIV+KD S ++ DR+ W K+K EY DLDV+++
Sbjct: 378 ASSLGDIVDALNSSVDNNEEGIVVKDTKSVYKCSDRNSGWFKVKMEYFDDVVHDLDVILM 437
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPY-- 180
GG Y SG+ + F V ++ +TY +SF R+ +GLSDE+LD + K +
Sbjct: 438 GGCYSSGK----LNSFFVGVSS--GANTY----LSFGRISSGLSDEQLDLLAEKFQSKGV 487
Query: 181 -FRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSI--TSDIRTIRSEVFSAPYS 237
F+ + F ++RPD++IE P S IL I T IRT V PY+
Sbjct: 488 DFKSFSTESEGKLQF------GRDRPDLYIE-PHNSCILQIRATELIRTTNDTV-KCPYT 539
Query: 238 LRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEK 297
LRFPR+ ++R DKP +C + +EL + + K + L + K +R +K
Sbjct: 540 LRFPRVLKIRDDKPVDECFSINELLELAGQNKPVIKLNKRHIELSEISAK----ARPAKK 595
Query: 298 KNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMNLN 357
+ ++ S L + G+ FY + + LD ++ + + GG S +
Sbjct: 596 IKLEVIKSDLLTESGDFLTGKR-------FYVDSGTQKWGLDDIYHAIKKAGGEVSYRVE 648
Query: 358 NSVTHCVAADNKGLKYEAAKR--RGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKK 415
+V + + E K+ D++H W+ ++L+ +P + + ++
Sbjct: 649 PNVDVILVSKVGKKVAELMKQPNHFDIVHVDWLHRVMEYRELVDYKPGEMFYKGANFRRD 708
Query: 416 LQEEVDEFSDLY 427
+ + D F D +
Sbjct: 709 VGSDSDRFGDSF 720
>gi|198419782|ref|XP_002131274.1| PREDICTED: similar to DNA ligase IV [Ciona intestinalis]
Length = 632
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/211 (35%), Positives = 122/211 (57%), Gaps = 11/211 (5%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGK-WLKLKPEYIRAG-SDLDVLI 121
A + EV + I+ R+EGI++K+ +K+ P R G W K+KPEY+ DLD++I
Sbjct: 420 ASSNQEVMSSLNDAIDRREEGIIVKNPNAKYFPNKRKGSGWFKIKPEYVGGVVDDLDLVI 479
Query: 122 IGGYYGSGRRGGEVAQFLVALAERPAPDTY--PRRFISFCRVGTGLSDEELDAVVTKLKP 179
IG +G+GR G ++ F + + R + D+ PR F S CR+G+G +D++L +V KLK
Sbjct: 480 IGATFGTGRHGNMLSMFHLGVGVRDSEDSSDPPRVFKSLCRIGSGYTDKQLLQLVDKLKN 539
Query: 180 YFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLR 239
+ ++ K+ P + +VT KE+PDV+I P S+++ + + I S ++A +LR
Sbjct: 540 KLKVFD--KKKHPDWLKVT---KEKPDVYIH-PCDSLVVQVRA-TEIISSSSYAAHCTLR 592
Query: 240 FPRIDRVRYDKPWHDCLDVQSFVELVHSSNG 270
FPR+ +R DK + D LD L ++G
Sbjct: 593 FPRLIAIREDKTYLDALDTSQLDNLRSIADG 623
>gi|24641829|ref|NP_572907.1| Ligase4 [Drosophila melanogaster]
gi|7292907|gb|AAF48298.1| Ligase4 [Drosophila melanogaster]
gi|221307626|gb|ACM16689.1| FI02888p [Drosophila melanogaster]
Length = 918
Score = 122 bits (307), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 117/435 (26%), Positives = 208/435 (47%), Gaps = 30/435 (6%)
Query: 31 DGICVCVHVYMLSQLRSQIMAADQTG--EPCWSLVAHNVDEVEKFFKETIENRDEGIVLK 88
+G + H Y+ + Q + +Q+G + + +V E + F++ +++ EGIVLK
Sbjct: 382 NGQSLLDHTYIQRAYKLQKLIVEQSGVLQLMRARKIGSVQEFNELFQQALDSHAEGIVLK 441
Query: 89 DLGSKWEPGDR-SGKWLKLKPEYIRAG-SDLDVLIIGGYYGSGRRGGEVAQFLVALAERP 146
GS+++PG R G W K K +YI+ ++ DVLIIG +Y R+ V FL+ + + P
Sbjct: 442 KQGSRYQPGVRLGGGWYKDKADYIKGLITEFDVLIIGAFY--NRKRTFVDSFLLGVLQ-P 498
Query: 147 APDTYPRRFISFCRVGTGLSDEELDAVVT-KLKPYFRKYEYPKRAPPSFYQVTNNSKER- 204
AP R F +G ++ + V+ LKP++ ++ PP ++ KER
Sbjct: 499 APPGSSNRPEVFS-IGVVANNTKQRGVLNHTLKPHW--HDVVNEPPPLWFHY--KPKERS 553
Query: 205 --PDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFV 262
PD+WIE P+ S+IL + + F+ SL FPR + R DK W +C+ ++ F
Sbjct: 554 GCPDLWIE-PQNSVILQVKAADLAPNGAFFTRK-SLHFPRTEMKRDDKTWSECMTLKEFN 611
Query: 263 ELVHSSNGTTQKGKEYGGLQD--DKPKQFRSSRKGEKKNVSIVPSHFLQTDVSDIKGETS 320
+L + K L+D K KQ R + E+ + + + + D S +
Sbjct: 612 DLCGGPLAIKKLNKRQLRLEDVTTKRKQMRMT-PSERSRLGLA-VYEKRYDASTSASTSK 669
Query: 321 IFSDMVFYFVNVPPA-YSLDSLHKMVVENGGTFSMN--LNNSVTHCVAADNKGLKYEAA- 376
+F + F ++ +S L ++ V+NGG N N+ C+A D L
Sbjct: 670 LFDGLSFCILSGSAGRHSKHQLQELAVKNGGCIVENPLPNDPKCFCIAGDETFLVKRLIL 729
Query: 377 --KRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEVDEFSDLYFWDL-DL 433
R D++ W+L C QK+ L+L+P+ + ++ ++ L E D D Y D+ ++
Sbjct: 730 QQPRTCDIVRMEWLLRVC-QKQELELKPRDLIAATEPLQQDLAECFDRHGDSYTKDIANV 788
Query: 434 ADIKQLLSNVDRSED 448
+++ LL ++ + D
Sbjct: 789 EELQDLLQGIELTAD 803
>gi|21430702|gb|AAM51029.1| RH46576p [Drosophila melanogaster]
Length = 918
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 117/435 (26%), Positives = 208/435 (47%), Gaps = 30/435 (6%)
Query: 31 DGICVCVHVYMLSQLRSQIMAADQTG--EPCWSLVAHNVDEVEKFFKETIENRDEGIVLK 88
+G + H Y+ + Q + +Q+G + + +V E + F++ +++ EGIVLK
Sbjct: 382 NGQSLLDHTYIQRAYKLQKLIVEQSGVLQLMRARKIGSVQEFNELFQQALDSHAEGIVLK 441
Query: 89 DLGSKWEPGDR-SGKWLKLKPEYIRAG-SDLDVLIIGGYYGSGRRGGEVAQFLVALAERP 146
GS+++PG R G W K K +YI+ ++ DVLIIG +Y R+ V FL+ + + P
Sbjct: 442 KQGSRYQPGVRLGGGWYKDKADYIKGLITEFDVLIIGAFY--NRKRTFVDSFLLGVLQ-P 498
Query: 147 APDTYPRRFISFCRVGTGLSDEELDAVVT-KLKPYFRKYEYPKRAPPSFYQVTNNSKER- 204
AP R F +G ++ + V+ LKP++ ++ PP ++ KER
Sbjct: 499 APPGSSNRPEVFS-IGVVANNTKQRGVLNHTLKPHW--HDVVNEPPPLWFHY--KPKERS 553
Query: 205 --PDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFV 262
PD+WIE P+ S+IL + + F+ SL FPR + R DK W +C+ ++ F
Sbjct: 554 GCPDLWIE-PQNSVILQVKAADLAPNGAFFTRK-SLHFPRTEMKRDDKTWSECMTLKEFN 611
Query: 263 ELVHSSNGTTQKGKEYGGLQD--DKPKQFRSSRKGEKKNVSIVPSHFLQTDVSDIKGETS 320
+L + K L+D K KQ R + E+ + + + + D S +
Sbjct: 612 DLCGGPLAIKKLNKRQLRLEDVTTKRKQMRMT-PSERSRLGLA-VYEKRYDASTSASTSK 669
Query: 321 IFSDMVFYFVNVPPA-YSLDSLHKMVVENGGTFSMN--LNNSVTHCVAADNKGLKYEAA- 376
+F + F ++ +S L ++ V+NGG N N+ C+A D L
Sbjct: 670 LFDGLSFCILSGSAGRHSKHQLQELAVKNGGCIVENPLPNDPKCFCIAGDETFLVKRLIL 729
Query: 377 --KRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEVDEFSDLYFWDL-DL 433
R D++ W+L C QK+ L+L+P+ + ++ ++ L E D D Y D+ ++
Sbjct: 730 QQPRTCDIVRMEWLLRVC-QKQELELKPRDLIAATEPLQQDLAECFDRHGDSYTKDIANV 788
Query: 434 ADIKQLLSNVDRSED 448
+++ LL ++ + D
Sbjct: 789 EELQDLLQGIELTAD 803
>gi|367006613|ref|XP_003688037.1| hypothetical protein TPHA_0M00260 [Tetrapisispora phaffii CBS 4417]
gi|357526344|emb|CCE65603.1| hypothetical protein TPHA_0M00260 [Tetrapisispora phaffii CBS 4417]
Length = 966
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 124/501 (24%), Positives = 213/501 (42%), Gaps = 69/501 (13%)
Query: 63 VAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLI 121
+AH+ + + + I EGIVLK S + GDR+ W+K+KPEY+ + G +LD+++
Sbjct: 432 IAHDSESIRSALQAAISVGSEGIVLKKYDSLYSVGDRNNDWIKVKPEYLEQFGENLDLIV 491
Query: 122 IG---GYYGSGRRGGEVAQF-----------LVAL------AERPAPDTYPRR------F 155
IG G S G V + ++ L ++ P+ P R F
Sbjct: 492 IGRDPGKKDSLMCGVAVLENEESYEKILQEEVITLTSDDDDSQNNIPEDKPIRTKRITKF 551
Query: 156 ISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKS 215
ISFC + G+S+EE + K ++K+ APP+ Y P WI +P S
Sbjct: 552 ISFCVIANGISNEEFKEIDRKTFGCWKKFS--DEAPPTDY--LEFGTRLPVEWI-NPHDS 606
Query: 216 IILSITSDIRTIRS-----EVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNG 270
++L + + R++ + + F Y+L R+R DK ++DC +F +LV ++N
Sbjct: 607 VVLEVKA--RSLENNEALRDKFKTGYTLYGAYCRRIRTDKDFNDCY---TFSDLVIATNK 661
Query: 271 TTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFV 330
+ YG K K+ R+S+ + + L D + IF + F+ +
Sbjct: 662 KRSSSELYGNHSHIKKKRSRTSKVN-------MLNQTLSIQDDDTGFTSKIFDGLSFFVI 714
Query: 331 ------NVPPAYSLDSLHKMVVENGGTF-----SMNLNNSVTHCVAADNKGLKYEAAKRR 379
N +D L ++ NGG S NLN ++ E KR
Sbjct: 715 SDYVDSNSSFRLRIDELINIIKVNGGQLIFNLVSQNLNEKYVRIMSCKKTFECNELIKRG 774
Query: 380 GDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQL 439
D+IH W+LDC + KLL +P + ++S S ++ VD D Y + +++ L
Sbjct: 775 YDIIHPKWILDCIANDKLLDFEPSHCFNVSQSLSTISKQRVDLLGDSYQKYITEEELELL 834
Query: 440 LSNVDRSEDPKTIDYYKKKYCPQDKWSCFHGCCIYFYHSTEPLSPDWEVLLGLALRRLKL 499
+S S+ PK Y Q I+ + + + +P + L+ L
Sbjct: 835 IS----SKTPKEQLYSNPLQFDQQ----IEKIPIFLFSNKKAYTPK-QCFSEKLLKETNL 885
Query: 500 EISFHGGKVCNNLANATHVVV 520
I +GG NN+ + +++
Sbjct: 886 YIKLYGGTSVNNINDCNVIII 906
>gi|195478363|ref|XP_002100495.1| GE16147 [Drosophila yakuba]
gi|194188019|gb|EDX01603.1| GE16147 [Drosophila yakuba]
Length = 918
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 116/429 (27%), Positives = 209/429 (48%), Gaps = 28/429 (6%)
Query: 31 DGICVCVHVYMLSQLRSQIMAADQTG--EPCWSLVAHNVDEVEKFFKETIENRDEGIVLK 88
+G + H Y+ + Q + +Q+G + + +V E + F++ +++ EGIVLK
Sbjct: 382 NGQSLLDHTYIQRAYKLQKLIVEQSGVLQLMRARKIGSVKEFNELFQQALDSHAEGIVLK 441
Query: 89 DLGSKWEPGDR-SGKWLKLKPEYIRAG-SDLDVLIIGGYYGSGRRGGEVAQFLVALAERP 146
S+++PG R G W K K +YI+ ++ DVLIIG +Y R+ V FL+ + + P
Sbjct: 442 KQASRYQPGVRLGGGWYKDKADYIKGLITEFDVLIIGAFYN--RKRTFVDSFLLGVLQ-P 498
Query: 147 APDTYPRRFISFCRVGTGLSDEELDAVVTK-LKPYFRKYEYPKRAPPSFYQVTNNSKER- 204
AP R F +G ++ + AV+ LKP++ ++ PP +Y +
Sbjct: 499 APPGSSNRPEVFS-IGVVANNTKQRAVLNHTLKPHW--HDVVNEPPPLWYHYKPKDRSGC 555
Query: 205 PDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
PD+WIE P S+IL + + F+ SL FPR + R DKPW++C+ ++ F L
Sbjct: 556 PDLWIE-PHNSVILQVKAADLAPNGAFFTRK-SLHFPRTEMKRDDKPWNECMTLKEFNNL 613
Query: 265 VHSSNGTTQKGKEYGGLQD--DKPKQFRSSRKGEKKNVSIVPSHFLQTDVSDIKGETS-I 321
S + K L+D K KQ R + E+ +++ + + + V++ +S +
Sbjct: 614 CDGSLAIKKLNKRQLRLEDVTTKRKQMRMT-PSERSRLAL--AVYEKRYVANPSTSSSKL 670
Query: 322 FSDMVFYFVNVPPA-YSLDSLHKMVVENGGTFSMN--LNNSVTHCVAADNKGLKYEAA-- 376
F + F ++ +S L ++ V+NGG N N+ C+A D L
Sbjct: 671 FDGLSFCILSGSAGRHSKHQLQELAVKNGGCIVENPLPNDPKCFCIAGDETFLVRRLILQ 730
Query: 377 -KRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEVDEFSDLYFWDL-DLA 434
R D++ W+L C QK+ L+L+P+ + ++ ++ L E D D Y D+ ++
Sbjct: 731 KPRTCDIVRMEWLLRVC-QKQELELRPRDIIAATEPLQQDLAECFDRHGDSYSKDIANVQ 789
Query: 435 DIKQLLSNV 443
+++ LL ++
Sbjct: 790 ELQDLLQDI 798
>gi|358383754|gb|EHK21416.1| hypothetical protein TRIVIDRAFT_180472 [Trichoderma virens Gv29-8]
Length = 851
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 125/487 (25%), Positives = 206/487 (42%), Gaps = 50/487 (10%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLII 122
A + D +E ++ + N EG+VLK+ S + R+ WLK+KPEY+ G LD +II
Sbjct: 338 ATSADAIEPLLRDVVANASEGLVLKNPRSMYRLNSRNDDWLKVKPEYMSEFGESLDCVII 397
Query: 123 GGYYGSGRRGGEVAQFLVAL---AERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 179
GGYYGSG+RGG ++ FL L P + SF +VG G E+ + +
Sbjct: 398 GGYYGSGKRGGMLSSFLCGLRVTQNHIQAGANPEKCFSFFKVGGGFRTEDYAEIRHRTDG 457
Query: 180 YFRKYEYPKRAPPSFYQVTNNSK---ERPDVWIESPEKSIILSITSDIRTIRSEVFSAPY 236
+ +++ PK P + ++ ERPD+WI K ++ S+ F+ +
Sbjct: 458 KWMEWD-PKNPPSEYIELGGGEAKQFERPDMWIRP--KDSVVVSVKAASVGPSDQFARGF 514
Query: 237 SLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGE 296
+LRFPR R+R D+ W L ++ F EL E ++ + R + K
Sbjct: 515 TLRFPRFRRLRLDRSWDTALSLEEFQELKQRVE------TEIKAIEMTVEDRRRRNPKRV 568
Query: 297 KKNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFVN---VPPAYSLDSLHKMVVENGGTFS 353
KK + I K + +F + F ++ P + L ++ ENGG+ S
Sbjct: 569 KKELVIAGDDAAPPQYEGDK--SKLFEGLEFCVLSESLKPYKKTKTQLESIIKENGGSIS 626
Query: 354 MNLNNSVTHCVAADNKGLKYEAAKRRGDV--IHYSWVLDCCSQKK---LLQLQPKYYLHL 408
+ D K +K + + GDV I W+ DC Q LL + + H
Sbjct: 627 QRAAAGTKMILIGDKKVVKAASLIKDGDVDIIRPRWIKDCLEQPNGGFLLPYEEGHLFHA 686
Query: 409 SDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNVDRSEDPKTIDYY--------KKKYC 460
+D+ + D+F D Y D+ + ++++LL ++ + E ++ D K
Sbjct: 687 TDALLDVAAQNTDQFGDSYARDVGVDELRELLRDMPKLERMESFDKVLFLEQLEQHGKDV 746
Query: 461 PQDKWSCFHGCCIYFY---HSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNL--ANA 515
+ F C + FY + E WE I + GG +L +
Sbjct: 747 TTLRSFMFSRCRVLFYLADDAKENTKDKWERY-----------IQYAGGSCSQDLDDESV 795
Query: 516 THVVVLS 522
TH+VVL
Sbjct: 796 THIVVLG 802
>gi|402223519|gb|EJU03583.1| ATP-dependent DNA ligase [Dacryopinax sp. DJM-731 SS1]
Length = 1006
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/351 (24%), Positives = 167/351 (47%), Gaps = 37/351 (10%)
Query: 69 EVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYG 127
+V+ + +++R EG+V+K+ + R WLK+KPEY+ S+ +DVL++G YG
Sbjct: 429 DVKTELERVMDDRGEGLVVKNPDKPYVLAGREDAWLKVKPEYVDEMSETVDVLVVGADYG 488
Query: 128 SGRRGGEVAQFLVALAERPAPDTYP---------------RRFISFCRVGTGLSDEELDA 172
+G+RGG V+ + A+ + P R F+SF R+G+GLS + +
Sbjct: 489 TGKRGGGVSTLICAVRDDTMSGNDPQQVIFSVNEHADDRARSFLSFVRIGSGLSMSDFEE 548
Query: 173 VVTKLKPYFRKYEYPKRAPPSFYQVTNNSKE-RPDVWIESPEKSIILSITSDIRTIRSEV 231
+ K EY F ++ + E +PDV+I PE S ++++ + + SE
Sbjct: 549 IRQK-----NWREYTPGEELDFVKLADRGTEDKPDVYIR-PEDSFVITVKA-AEIVTSEK 601
Query: 232 FSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRS 291
++ +++RFPR +R D W D + V+ ++ GG + +
Sbjct: 602 YAMDWTMRFPRCRAIRRDATWEDVMTVKEIHDM------------RTGGRKREASSDPSR 649
Query: 292 SRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGT 351
+++ + ++P+ + T+V +I+ + +F + F + + L K+V E GG
Sbjct: 650 NKRRKVNQQLVLPASSMGTNVKNIQVKNDLFDGLRFVILEGMENHDKSMLEKLVHEGGGK 709
Query: 352 FSMNLNNSVTHCVAADNKGLKYEAAKRRG-DVIHYSWVLDCCSQKKLLQLQ 401
F L +++ K AA ++G D++ +++DC Q+++L Q
Sbjct: 710 FQQLLKGDDLIVISSRLGFPKANAAVKKGFDILTPRYIVDCVDQEEVLPRQ 760
>gi|340959653|gb|EGS20834.1| hypothetical protein CTHT_0026720 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1032
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 131/555 (23%), Positives = 252/555 (45%), Gaps = 69/555 (12%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLII 122
A + D +E ++ I EG+VLK+ S++ R+ W+K+KPEY+ G LD +II
Sbjct: 501 ATSADAIEPALRKIISESSEGLVLKNPRSRYRLNSRNNDWIKVKPEYMSEHGESLDCVII 560
Query: 123 GGYYGSGRRGGEVAQFLVALA-----ERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
GGYYGSGRRGG ++ FL + R + + +SFC+VG G E+ +
Sbjct: 561 GGYYGSGRRGGTLSSFLCGVRVSENFTRSGAASKTEKCLSFCKVGGGFKGEDYAEIRHHT 620
Query: 178 KPYFRKYEYPKRAPPSFYQVTNNSK---ERPDVWIESPEKSIILSITSDIRTIRSEVFSA 234
+ ++ ++ P P + ++ + ERPDVWI P +S+++SI + S+ F+
Sbjct: 621 EGKWKDWD-PSNPPSEYIELGGGERLQHERPDVWIR-PSESVVISIKA-ASFGPSDQFAT 677
Query: 235 PYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRK 294
Y+LRFPR +R DK W +DV + + + ++ ++ +++ K R K
Sbjct: 678 GYTLRFPRFRALRLDKAWDQAMDVDE-CDAIRTKVKEEEQERKAMEIENRK----RRPTK 732
Query: 295 GEKKNVSIV---PSHFLQTDVSDIKGETSIFSDMVFYFVN---VPPAYSLDSLHKMVVEN 348
+K+ + + P+ + + +F + F ++ P S L +++ ++
Sbjct: 733 RQKREIVVAGTDPNASAPLEFAVPLTNKQLFKGLEFCVLSEGLRPRKISKPELEELIKKH 792
Query: 349 GGTFSMNLNNSVTH----CVAADNKGLKYEAAKRRG--DVIHYSWVLDCC----SQKKLL 398
GGT ++ + V AD ++ + K+ G D++ WV DC + LL
Sbjct: 793 GGTIKQKVDPASVRGGGTIVLADKNVVRAASLKKAGGVDIVRPRWVFDCLERTGGEGYLL 852
Query: 399 QLQP-KYYLHLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNVDRSEDPKTID---- 453
+ ++ LH ++ K ++ D + D Y D+ + +++++L ++ E K D
Sbjct: 853 PFETDRHLLHATEGMKLVARDNTDAYGDSYARDVGIDELREILDRMNLPERSKEFDAGLF 912
Query: 454 ---YYKKKYCPQDKWS-CFHGCCIYFYHSTEPLSPDWEVLLGLALRRLKLEISFHGGKVC 509
+ + ++ S F C +YF + + EV+ RL I F G++
Sbjct: 913 LDQLEEHGHGLEEMRSFLFRRCRVYFAVAEGKEGSETEVI------RLGYYIRFGNGEIV 966
Query: 510 NNL---ANATHVVVLS-------VLGYDVNFNSLTESFTAREKHLLWNKKLHVVRSQWLE 559
++ + TH+VV++ ++ D+ + + W +V +W+E
Sbjct: 967 ESIKDRKDITHMVVVAGSKEQERIVAVDMRYKVSS-----------WRAIPRIVTPKWVE 1015
Query: 560 DCLAKEQKSEEYEYS 574
DC + +E Y+
Sbjct: 1016 DCWKEGTVVDEEAYA 1030
>gi|392589951|gb|EIW79281.1| DNA ligase 4 [Coniophora puteana RWD-64-598 SS2]
Length = 992
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/369 (27%), Positives = 174/369 (47%), Gaps = 30/369 (8%)
Query: 69 EVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIGGYYG 127
++ + +E + R EG+V+K S++ R+ W+K+KPEY+ G +DVL++ YG
Sbjct: 425 DIRQKMEEVMSARGEGLVIKHPDSEYTLNGRNRDWIKVKPEYMDNLGETVDVLVVAANYG 484
Query: 128 SGRRGGEVAQFLVA-LAERPAPDTYPRRFISFCRVGTGLSDEELDAV-VTKLKPYFRKYE 185
+G+R G V+ + A L +R D ++ SF RVGTGLS + V K KP
Sbjct: 485 TGKRSGGVSTLICAVLNDRQPDDDDEPKYSSFVRVGTGLSFTDYIWVRQKKWKP------ 538
Query: 186 YPKRAPPSFYQVTNNSKE-RPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRID 244
+ PP+FYQ + +E + D++IE P S I+ I + S+ + ++RFPRI
Sbjct: 539 WTAEDPPTFYQTSKRGQEDKGDMYIE-PHDSFIVKIKA-AEITASDQYHMGMTMRFPRIL 596
Query: 245 RVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVP 304
+R D DC+ +E + +G G+ + K K + K SI+P
Sbjct: 597 SIRDDLGIEDCMTASEVLESMQVERKRKMEGNT--GVSNKKRKTMTA------KKASILP 648
Query: 305 SHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYS----LDSLHKMVVENGGTFSMNLNNSV 360
+ D+ ++ E+ +F DM F + P + + + L K++ NGG + +
Sbjct: 649 EYH-GPDLKSVELESDVFEDMRFMVSSDPKSRTGSEDREELMKIIHANGGQCVQVVGSQP 707
Query: 361 THCVAADNK---GLKYEAAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQ 417
T V LK K D++ W+ D S+ +L + +Y H + +++L
Sbjct: 708 TIVVYGGTTTPYDLKLLINKGTVDIVKPEWIHDSVSRGQLAPMAKRYLFHA--THERQLD 765
Query: 418 EEVDEFSDL 426
+ D+ D+
Sbjct: 766 PDFDQDEDV 774
>gi|358334728|dbj|GAA27477.2| DNA ligase 4, partial [Clonorchis sinensis]
Length = 959
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 82/243 (33%), Positives = 124/243 (51%), Gaps = 30/243 (12%)
Query: 60 WSLVAHNVDEVEKFFKETIENRDEGIVLK-DLG-SKWEPGDRS-GKWLKLKPEYIRAG-S 115
W V D V K F ++ R EG+V K +G S + PG R G W KLKP+Y+
Sbjct: 482 WCQVPIMADHVAKVFDHLMDYRQEGLVAKLTVGRSPYLPGRRQRGGWWKLKPDYVSGLLE 541
Query: 116 DLDVLIIGGYYGSG------RRGGEVAQFLVALAERPAPDTYPRR-------FISFCRVG 162
DLD L++GGY+ S + V QFL A+ D ++ F+SFCRV
Sbjct: 542 DLDCLVVGGYFSSASGSKHLNQSKRVRQFLCAVR---GSDNLSQQDGLSLPCFLSFCRVS 598
Query: 163 TGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITS 222
+GL+ ++ + KL P+++ ++ KR F + + ERPDVWI +P+ S+ L + +
Sbjct: 599 SGLTVKQFKELNHKLGPHWKPFDR-KRPNTGFTEWLKVTTERPDVWI-APQHSVTLQLHA 656
Query: 223 DIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNG-------TTQKG 275
I S ++ + RFPR+ VR DKPW DCL ++ V L + G Q+G
Sbjct: 657 S-ELISSGSYATGLTARFPRVVAVRDDKPWQDCLTMEELVRLNTETQGKLAVRRLAKQEG 715
Query: 276 KEY 278
++Y
Sbjct: 716 RDY 718
>gi|350409555|ref|XP_003488777.1| PREDICTED: DNA ligase 4-like [Bombus impatiens]
Length = 896
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 128/528 (24%), Positives = 230/528 (43%), Gaps = 62/528 (11%)
Query: 59 CWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSG-KWLKLKPEYIRA-GSD 116
C S +E+ K F E+I N++EGIV+K+ SK++P R+G K+K EY D
Sbjct: 397 CKSTKVSRSEELCKIFNESIRNKEEGIVVKECDSKYKPNVRNGTNCYKIKAEYSEGLVHD 456
Query: 117 LDVLIIGGYYGSGRRGGEVAQFLVALAERP-APDTYPRRFISFCRVGTGLSDEELDAVVT 175
+D++I+GGYYG + G V FL+ +A P P +F+S V +G S L +
Sbjct: 457 IDLIILGGYYGR-KFMGLVNSFLMGVASSTKTPGENPTKFLSVVSVNSGFSMNTLKELGR 515
Query: 176 KLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP 235
K ++ PP K P++WI PE SIIL+I + I S +
Sbjct: 516 MFKDKWQTERPENVVPP---------KVEPNLWIR-PENSIILTIKAS-EMICSNNYPTG 564
Query: 236 YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSS---NGTTQKGKEYGGLQDDKPKQFRSS 292
YSLRFPR+ VR DKPW+D + L+ + T++ Y +++ + + R +
Sbjct: 565 YSLRFPRVTSVRTDKPWYDVCTTDNLKLLIKDTQPIQKLTKREIPYEDIEEARESKVRKT 624
Query: 293 RKGEK---KNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENG 349
+K + S+ P+ + V T +F D +N + + ++++++
Sbjct: 625 KKQRSIKYEEKSMKPNIYDNPPVH----LTRLFDDKEICVINGVDELPKEQIEEILLQHR 680
Query: 350 GTFSMNLNNSVTHCVAADN-KGLKYEAA--KRRGDVIHYSWVLDCCSQKKLLQLQ---PK 403
N +C+ N K ++ ++ DV+ W ++ LQ P
Sbjct: 681 ANVVQNPLKE-NYCIIVGNVKTVRASCIIQSKKYDVVTLDWFRRVTKKENWSSLQDFLPW 739
Query: 404 YYLHLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNVDRSEDPKTIDYYKKKYCPQD 463
+ +S+K++L + D++ D Y D D + + V+ +E Y + K Q+
Sbjct: 740 DLICSRESTKRRLAQYYDDYYDHYTIDADEESLLRSFKKVEDTEQNVKFGYTEMKKIDQE 799
Query: 464 -------KWSCFHGCCIYFYHSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNLANAT 516
+S F G YFY S++ LS K E F GG + + ++
Sbjct: 800 LFDSEISPYSLFRGIVAYFYDSSD-LS--------------KFEFRFMGGTIRETIDDSV 844
Query: 517 HVVVLSVLGYDVNFNSLTESFTAREKHLLWNKKLHVVRSQWLEDCLAK 564
+ ++ D+ +L ++ + L +++S+W+ +C +
Sbjct: 845 TNIFINNNSTDIELQNLIDNKS--------QASLTIIKSEWIGECFKQ 884
>gi|395331891|gb|EJF64271.1| DNA ligase 4 [Dichomitus squalens LYAD-421 SS1]
Length = 1025
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 98/350 (28%), Positives = 171/350 (48%), Gaps = 29/350 (8%)
Query: 76 ETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIGGYYGSGRRGGE 134
+ + NR EG+VLK +++ R+ W+K+KPEY+ G +D+L++ G YG+GRR G
Sbjct: 444 DIVANRGEGLVLKHPDAEYVLNGRNKDWIKVKPEYMDNMGETVDLLVVAGNYGTGRRSGG 503
Query: 135 VAQFLVA-LAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPS 193
V+ + A L +R + D ++ SF R+GTGLS D + + KP ++ PS
Sbjct: 504 VSTLICAVLDDRRSNDDDEPKYCSFVRIGTGLS--YADYIWIRQKP----WKVWGVNGPS 557
Query: 194 FYQVTNNSKE-RPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPW 252
+ V+ E + D ++E PE S IL I I S+++S +++RFPR R+R D
Sbjct: 558 WLHVSRKGHEDKGDCYLE-PEDSFILKIKG-AEIISSDLYSLGFTMRFPRALRIRDDLSI 615
Query: 253 HDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTDV 312
DC+ + +E + S E +D + + K K +I+P + T++
Sbjct: 616 ADCMTATAVLENIRS---------EKKRKMEDDDDKPKKKAKKTAKKPTIMP-EYQGTNL 665
Query: 313 SDIKGETSIFSDMVFYFVNVPPAYS----LDSLHKMVVENGGTFSM----NLNNSVTHCV 364
D+ E+ +F F + P + + +L +M+ +GG + N V +
Sbjct: 666 KDVPVESELFDGYKFMVSSDPKSRTGSADKSALQQMIHAHGGKVVHIPRDDPNLFVVYGG 725
Query: 365 AADNKGLKYEAAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKK 414
LK K D+I W+LDC +++ ++ L KY+ H + + K+
Sbjct: 726 QTTPYDLKLIINKDVCDIIRPQWILDCVAKETIVPLTKKYFFHATTARKE 775
>gi|320590670|gb|EFX03113.1| DNA replication and repair protein [Grosmannia clavigera kw1407]
Length = 1019
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 141/529 (26%), Positives = 243/529 (45%), Gaps = 54/529 (10%)
Query: 70 VEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIGGYYGS 128
V+ ++ + + EG+VLK+ S + R+ W+K+KPEY+ G LD ++IGG++GS
Sbjct: 489 VQPMLRQIVADSSEGLVLKNPRSMYRLNSRNDDWIKVKPEYMTEFGESLDCVVIGGFFGS 548
Query: 129 GRRGGEVAQFLVAL---AERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYE 185
GRRGG ++ FL L + P + +SF +VG G E D + + E
Sbjct: 549 GRRGGMLSSFLCGLRVSQNQIDSGANPEKCLSFFKVGGGFKAE--DYAEIRHLTEGKWIE 606
Query: 186 YPKRAPPSFY-QVTNN---SKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFP 241
+ PP Y ++ + E+PDVWI P S++LS+ + S+ F+ +LRFP
Sbjct: 607 WDSSNPPRDYIELAGDEAGQAEKPDVWIR-PRDSVVLSVKAS-SVSPSDTFAVRETLRFP 664
Query: 242 RIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVS 301
R R+R D+ W LD F L ++ T++ KE ++ + +Q R S+K V
Sbjct: 665 RFRRLRLDRAWDTALDTDQFRLLRAHADEVTKERKE---MEIENRRQRRPSKKSRLDLVV 721
Query: 302 IVPSHFLQTDVSDIKGE-------TSIFSDMVFYFVN---VPPAYSLDSLHKMVVENGGT 351
S D K ++ FS M F ++ P S + ++ ++GG
Sbjct: 722 AGQSRQQGQDAEATKASKPAAASTSNTFSGMEFCVLSEAARPLKKSKAQIEALIKDHGGR 781
Query: 352 FSMNLNNSVTHCVAADNKGLKYEAAKRRGDVIHY--SWVLDCCSQKK---LLQLQPKYYL 406
N + + AD K +K + R GDV+ W+ DC SQ LL + +
Sbjct: 782 LCQQPNAASGMIIVADKKVVKVASLIRAGDVVIVKPQWLFDCLSQSGGGFLLPFETSHLF 841
Query: 407 HLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNVDRSEDPKTIDYYKKKY------- 459
H + +++ K + + D F D + D+ + +++ +L + S + K +
Sbjct: 842 HATKAAEMKAKRQTDAFGDSFARDIGVDELRGILDGMHVSSNDADALLKKDVFLDQLEEH 901
Query: 460 ---CPQDKWSCFHGCCIYFYHSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNLANA- 515
Q K F C +YF +T +P + L +LK + F GG+V N+L +A
Sbjct: 902 GHDLGQLKGLTFRCCSVYF--ATTGAAP------AINLLQLKNYVLFGGGRVANSLEDAA 953
Query: 516 -THVVVLSVLGYDVNFNSLTES--FTAREKHLLWN--KKLHVVRSQWLE 559
TH++VL G DV+ + + A + L+ + ++ +V + W+E
Sbjct: 954 LTHIIVLCRDGNDVDEDGGADGGELAAEIRRLMSSRTRQPRIVSTAWVE 1002
>gi|170038202|ref|XP_001846941.1| DNA ligase 4 [Culex quinquefasciatus]
gi|167881754|gb|EDS45137.1| DNA ligase 4 [Culex quinquefasciatus]
Length = 875
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 100/387 (25%), Positives = 168/387 (43%), Gaps = 34/387 (8%)
Query: 59 CWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDL 117
C + + + + + + I+ EG+V+K S + P +R+ W K+KP+YI SD
Sbjct: 354 CKRIKVESSEHLVELLNQAIDTHQEGVVIKKQDSTYSPNERNAGWYKIKPDYIDNLVSDF 413
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D+LI+GG+Y + R V +LV + ++ DT F++ +VG GLS ++ + T L
Sbjct: 414 DLLIMGGFYNAKR--SFVNTYLVGVLDKSTEDT----FLAVTKVGIGLSVDQWRTLNTSL 467
Query: 178 KPYFRKYEYPKRA-------PPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSE 230
+P++R+ + + PP + PDVWI P SI+L + +RS
Sbjct: 468 RPHWREVTFRREGRSKISEEPPGLRW----GQTAPDVWI-PPNHSIVLQLKGS-ELVRSS 521
Query: 231 VFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFR 290
F+ Y++RFPRI +R DK + D F L ++ + K + D P
Sbjct: 522 SFATSYTIRFPRITAIRSDKDFKDVCTSDEFARLCSANTTVAKLAKRHVTAADLLPTSGT 581
Query: 291 SSRKGEKKNVSIVPSH------FLQTDVSDIKGETSIFSDMVFYFVNVPP-AYSLDSLHK 343
+SRK +K +S + S Q + I S + F ++ A S+ L
Sbjct: 582 TSRK--RKQISPLKSRQRSAPPLPQPEEDAPPPLDDICSGLDFCVLSTAKGAPSIRELET 639
Query: 344 MVVENGGTFSMNLNNSVTHCVAADNKGLKYEAAK-RRGDVIHYSWVLDCCS----QKKLL 398
++ +GG N +A + L + RR +V WVL + L
Sbjct: 640 VIRRHGGRTVKNPGPKTYAVIAGERTFLVSRIIETRRHNVATVEWVLRTLGGPQPRTNLP 699
Query: 399 QLQPKYYLHLSDSSKKKLQEEVDEFSD 425
P L +D +++L E D D
Sbjct: 700 DFTPNDLLAATDELREQLAERFDRIGD 726
>gi|321264077|ref|XP_003196756.1| DNA ligase (ATP) [Cryptococcus gattii WM276]
gi|317463233|gb|ADV24969.1| DNA ligase (ATP), putative [Cryptococcus gattii WM276]
Length = 1073
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 171/363 (47%), Gaps = 33/363 (9%)
Query: 69 EVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIGGYYG 127
++ ++ + +E + EG+V+K ++ R W+K+KPEY + G +L+VL++GG++G
Sbjct: 446 DIREYLERVVETKGEGLVVKKTDVIYQTNSRGYDWIKVKPEYSDQMGENLEVLVLGGWWG 505
Query: 128 SGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYP 187
G R G++++ L L E+ D + F+ F R L +D KP+ R
Sbjct: 506 KGGRSGKISRLLCGLREQAFDDGTLQDFL-FNRFWNELFRLRVDFHKKHWKPFDRS---- 560
Query: 188 KRAPPSFYQVTN-NSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRV 246
PP+F ++ ++PDV+IE PE S ++ + + + ++LRFPR +
Sbjct: 561 --NPPAFMKLGPVGLDDKPDVYIE-PENSFVIEVKASEIVPAGGGYGIGFTLRFPRCKYI 617
Query: 247 RYDKPWHD--CLDVQSFVELVHSSNGTTQKGKEYGGLQD--DKPKQFRSSRKG------- 295
YD+ D D F T+K E+ D +PK+ +G
Sbjct: 618 YYDRNSRDYELDDDWDFC--------GTRKLTEWADFMDLFSRPKRSYDDSQGPGKKKKR 669
Query: 296 --EKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFS 353
+ + + ++F +S+I ETSIFSDM FY Y L +V ++G F+
Sbjct: 670 KVVRSKKNHITTNFRGQKLSNIDVETSIFSDMTFYIAKGTSEYPKADLEALVHKHGADFT 729
Query: 354 M-NLNNSVTHCVAADNKGLKYEAAKRRG-DVIHYSWVLDCCSQKKLLQLQPKYYLHLSDS 411
L++ ++ D K A R G +VI W+ + +++K L L ++ ++ S+
Sbjct: 730 QAQLSDLSAIVISPDQKSPLVRAQIRHGVNVIKPEWIFESIARRKALPLLKEFLVYASEE 789
Query: 412 SKK 414
+++
Sbjct: 790 AQE 792
>gi|337743285|gb|AEI73139.1| DNA ligase 4 [Kryptolebias marmoratus]
Length = 469
Score = 116 bits (290), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 63/158 (39%), Positives = 96/158 (60%), Gaps = 7/158 (4%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGG 124
+ +V + I+NR+EGI++KD S ++P R WLK+KPEY+ D LD+LI+GG
Sbjct: 312 TMQQVVGALNDAIDNREEGIMVKDPLSLYKPDKRGEGWLKIKPEYVDGLMDELDLLIVGG 371
Query: 125 YYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKY 184
Y+G GRRGG ++ FL A+AE P P P F S CR+G+G + +EL + KL +++ Y
Sbjct: 372 YWGKGRRGGMMSHFLCAVAEAPKPGEKPSVFHSLCRIGSGYTMKELYDLGLKLAKHWKVY 431
Query: 185 EYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITS 222
K PP+ E+P+V+IE P S+I+ + +
Sbjct: 432 R--KNDPPASILC---GTEKPEVYIE-PSDSVIIQVKA 463
>gi|448112033|ref|XP_004201992.1| Piso0_001463 [Millerozyma farinosa CBS 7064]
gi|359464981|emb|CCE88686.1| Piso0_001463 [Millerozyma farinosa CBS 7064]
Length = 759
Score = 115 bits (289), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 75/214 (35%), Positives = 121/214 (56%), Gaps = 28/214 (13%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDV 119
++++DE+++F +++++ EG+++K L S +EP RS WLKLK +Y+ G LD+
Sbjct: 554 SNDLDEIQQFLDQSVKDSCEGLMIKMLNGVDSYYEPSKRSRNWLKLKKDYLSGVGDSLDL 613
Query: 120 LIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 179
++IG Y G G+R G FL+A + +T + + C++GTG SDE+L ++ KLKP
Sbjct: 614 VVIGAYIGKGKRTGTYGGFLLA-----SYNTDTGEYETTCKIGTGFSDEDLASLHAKLKP 668
Query: 180 YFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPY--- 236
+ + PK P + T+NS +PDVW+E ++ +T+D+ S ++ A +
Sbjct: 669 --TEIDTPK---PYYVYDTSNSNAQPDVWLEP--TTVFEVLTADLSL--SPIYKAAFQQY 719
Query: 237 ----SLRFPRIDRVRYDKPWHDC---LDVQSFVE 263
SLRFPR RVR DK D DV F E
Sbjct: 720 GKGISLRFPRFIRVRDDKGVEDATTSTDVSEFYE 753
>gi|448114611|ref|XP_004202619.1| Piso0_001463 [Millerozyma farinosa CBS 7064]
gi|359383487|emb|CCE79403.1| Piso0_001463 [Millerozyma farinosa CBS 7064]
Length = 759
Score = 115 bits (289), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 75/214 (35%), Positives = 121/214 (56%), Gaps = 28/214 (13%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDV 119
++++DE+++F +++++ EG+++K L S +EP RS WLKLK +Y+ G LD+
Sbjct: 554 SNDLDEIQQFLDQSMKDSCEGLMIKMLNGVDSYYEPSKRSRNWLKLKKDYLSGVGDSLDL 613
Query: 120 LIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 179
++IG Y G G+R G FL+A + +T + + C++GTG SDE+L ++ KLKP
Sbjct: 614 VVIGAYIGKGKRTGTYGGFLLA-----SYNTDTGEYETTCKIGTGFSDEDLASLHAKLKP 668
Query: 180 YFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPY--- 236
+ + PK P + T+NS +PDVW+E ++ +T+D+ S ++ A +
Sbjct: 669 --TEIDTPK---PYYVYDTSNSNAQPDVWLEP--TTVFEVLTADLSL--SPIYKAAFQQY 719
Query: 237 ----SLRFPRIDRVRYDKPWHDC---LDVQSFVE 263
SLRFPR RVR DK D DV F E
Sbjct: 720 GKGISLRFPRFIRVRDDKGVEDATSSTDVSEFYE 753
>gi|393221932|gb|EJD07416.1| DNA ligase 4 [Fomitiporia mediterranea MF3/22]
Length = 1029
Score = 115 bits (289), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 107/375 (28%), Positives = 182/375 (48%), Gaps = 33/375 (8%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLII 122
+ +V K +E + NR EG+++K S++ R+ W+K+KPEY+ G +D+L++
Sbjct: 432 GRSASDVRKRLEEIMANRGEGLIIKHPNSEYILNGRNKDWVKVKPEYMDNMGETVDLLVV 491
Query: 123 GGYYGSGRRGGEVAQFLVALAE--RPAPDTYPRRFISFCRVGTGLSDEELDAVVTK-LKP 179
GG YG+G R G V+ + A+ + R A D ++ SF R+GTGLS + + K KP
Sbjct: 492 GGNYGTGYRSGGVSTLICAVLDDRRTASDDDEPKYSSFVRIGTGLSYADYVWIRQKNWKP 551
Query: 180 YFRKYEYPKRAPPSFYQVTNNS-KERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSL 238
+ K PS+YQ + ++ D++IE PE S IL I + S+ + +++
Sbjct: 552 ------FDKNKMPSWYQASKKGYDDKGDIYIE-PEDSFILKIKA-AEITPSDQYHLGFTM 603
Query: 239 RFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKK 298
RFPR +R D DC+ + +E S T +K K ++ + + RK +K
Sbjct: 604 RFPRAVAIRDDLSIADCMSATAVLE----SMKTVKKRK-----IEETDLKTKKKRKVVRK 654
Query: 299 NVSIVPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLD----SLHKMVVENGGTFSM 354
V+++P + + + D+ ++ IF + F + P + D L K++ NGG +
Sbjct: 655 PVNVMPEYRGEV-LKDVDVQSDIFEGLKFMVASDPRNRNGDKEKKELQKIIHVNGGKYVQ 713
Query: 355 NLNNS----VTHCVAADNKGLKYEAAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSD 410
V + LK K D+I SW+ DC + K L L KY+ H
Sbjct: 714 IAKGIDPILVVYGGLTIPYDLKLIIDKDIHDIIRPSWIYDCVERGKRLPLHKKYFFHA-- 771
Query: 411 SSKKKLQEEVDEFSD 425
+S +KL +E +E +
Sbjct: 772 TSDRKLDKEFNEVGE 786
>gi|406867348|gb|EKD20386.1| DNA ligase [Marssonina brunnea f. sp. 'multigermtubi' MB_m1]
Length = 995
Score = 115 bits (289), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 133/538 (24%), Positives = 235/538 (43%), Gaps = 58/538 (10%)
Query: 70 VEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIGGYYGS 128
+E+ ++ I+ EG+VLK+ S + +R+ W+K+KPEY+ G LD+++IGGYYG
Sbjct: 484 IEEQLRDVIDKGHEGLVLKNPNSAYSLNERNNMWMKVKPEYMTEFGESLDLIVIGGYYGG 543
Query: 129 GRRGGEVAQFLVAL---AERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYE 185
G RGG++A FL L ++ A + P + SFC+VG G E+ + + + +
Sbjct: 544 GHRGGKLASFLCGLRVNQDQIARGSNPMKCFSFCKVGGGFRGEDYAKIYHQTDGKWIPWN 603
Query: 186 YPKRAPPSFYQVTNNSK--ERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRI 243
R P + ++ K E+PDVWI+ P SI+L + + + S+ F Y+LRFPR
Sbjct: 604 -DMRPPKEYIRLGGGEKQYEKPDVWIK-PCDSIVLEVKAASVGV-SDRFGTKYTLRFPRF 660
Query: 244 DRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIV 303
R++ +K W L + F E+ Q +E ++ K + R +++ +K+
Sbjct: 661 RRLKDEKSWEQALSMDEFDEV-------KQNAEEESKTKEIKVENRRKTKRLKKEYRIAG 713
Query: 304 PSHFLQTDVSDIKGETSIFSDMVFYFVN---VPPAYSLDSLHKMVVENGGTFSMNLNNSV 360
++T + K T IF + F +N P + + + NGG +
Sbjct: 714 NDSKIKTPYAGPK--TKIFEGLNFCVMNESQQAPKRTKAETEQAIKGNGGNIFQTPGAAP 771
Query: 361 THCVAADNKGLKYEAAKRRG--DVIHYSWVLDCCSQ---------KKLLQLQPKYYLHLS 409
D + +K + + G +V+ +WV D Q + LL +P + H++
Sbjct: 772 NMICIGDKRVVKVASLIKMGQKNVVKPAWVFDAMQQAEADGLGKGRYLLPFEPAHMFHIA 831
Query: 410 DSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNVDRSEDPKTIDYYKKKYCPQ------- 462
++ VD + D Y D + D+K L VD PK + +++ Q
Sbjct: 832 GGFSDEIAGSVDVYGDSYARDTNPEDLKAL---VDDMIHPKNSSFSVEEFLLQLDEHGKG 888
Query: 463 ---DKWSCFHGCCIYFYHSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNN--LANATH 517
S F C + F S + + L ++ + F G++ +N + TH
Sbjct: 889 LQDTPGSMFARCVVRFVSSDMGGAKTMANIDHLIIQN---QFRFAAGRISDNDDDESITH 945
Query: 518 VVVLSVLGYDVNFNSLTESFTAREKHLLWNKKLHVVRSQWLEDCLAKEQKSEEYEYSL 575
V+L L S R L ++ +V WL+D ++ +E Y+L
Sbjct: 946 YVLLD------QDEDLISSLRKRVVQL--TRRPRIVDINWLKDSWEEKTLLDEERYAL 995
>gi|392565431|gb|EIW58608.1| DNA ligase 4 [Trametes versicolor FP-101664 SS1]
Length = 1027
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 99/398 (24%), Positives = 184/398 (46%), Gaps = 41/398 (10%)
Query: 45 LRSQIMAADQTGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWL 104
LRS ++ E +V + I NR EG+V+K S++ R+ W+
Sbjct: 416 LRSCVIPVAGRIELVTEFEGRTAKDVRTRMDDIIGNRGEGLVMKHPDSEYVLNGRNKDWI 475
Query: 105 KLKPEYI-------RAGSDLDVLIIGGYYGSGRRGGEVAQFLVALAE--RPAPDTYPRRF 155
K+KPEY+ + I G YGSGRR G V+ + A+ + R D ++
Sbjct: 476 KVKPEYMDNMGETVDVLVVVLTFIAAGNYGSGRRSGGVSTLICAVLDDRRVHNDDDEPKY 535
Query: 156 ISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSK-ERPDVWIESPEK 214
+F R+G+GLS D + + KP ++ R PS+ QV ++ DV++E P+
Sbjct: 536 STFVRIGSGLS--YADYIWIRQKP----WKPWGRDAPSYLQVARKGHDDKGDVYLE-PQD 588
Query: 215 SIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQK 274
S I+ + + ++++ +++RFPR ++R D DC+ + +E + S +K
Sbjct: 589 SFIVKVKA-AEITSTDMYHLGFTMRFPRALQIRDDLSIADCMTASAVLEGIRSE----KK 643
Query: 275 GKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFVNVPP 334
K K KQ R+++K +++P + ++ D++ E ++F D F + P
Sbjct: 644 RKMEDDTDKPKKKQNRTAKKP-----TMMP-EYRGVNLKDVEVEDNLFGDFKFVVSSDPK 697
Query: 335 AYS----LDSLHKMVVENGGTFSMNLNNSVTHCVAADNKGLKYE----AAKRRGDVIHYS 386
+ + +L +M+ +GG ++ N + + Y+ K D+I
Sbjct: 698 SRTGADDKKALLQMIHAHGGKYAQVARNDPNILIVYGGQTTPYDLRLIMDKGVCDIIRPQ 757
Query: 387 WVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEVDEFS 424
W+LDC + +K++ L KY+ H + + K E DE++
Sbjct: 758 WILDCVAYEKIVPLTKKYFFHATAARK-----ETDEYA 790
>gi|150863848|ref|XP_001382465.2| hypothetical protein PICST_56005 [Scheffersomyces stipitis CBS
6054]
gi|149385104|gb|ABN64436.2| ATP dependent DNA ligase [Scheffersomyces stipitis CBS 6054]
Length = 719
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 113/203 (55%), Gaps = 25/203 (12%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSK---WEPGDRSGKWLKLKPEYIRA-GSDLDV 119
+ N+DE+++F +++++ EG+++K L K +EP RS WLKLK +Y+ G LD+
Sbjct: 514 SSNLDELQQFLDQSVKDSCEGLMVKMLNGKESYYEPSKRSRNWLKLKKDYLAGVGDSLDL 573
Query: 120 LIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 179
++IG Y G G+R G FL+A + + + + C++GTG SDE+L ++ TKLKP
Sbjct: 574 VVIGAYIGRGKRTGNYGGFLLASYNQDTGE-----YETTCKIGTGFSDEDLASLHTKLKP 628
Query: 180 YFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPY--- 236
+ PK P + T NS +PDVW E +I +T+D+ S ++ A +
Sbjct: 629 --TEISVPK---PYYVYDTTNSNAKPDVWFEP--TTIFEVLTADLSL--SPIYKAAHQEY 679
Query: 237 ----SLRFPRIDRVRYDKPWHDC 255
SLRFPR R+R DK D
Sbjct: 680 GKGISLRFPRFLRIRDDKGIEDA 702
>gi|403419578|emb|CCM06278.1| predicted protein [Fibroporia radiculosa]
Length = 1019
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/370 (26%), Positives = 180/370 (48%), Gaps = 45/370 (12%)
Query: 69 EVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIG---- 123
+V + + I +R EG+VLK S++ R+ W+K+KPEY+ G +DVL++G
Sbjct: 412 DVRERMNDIIASRGEGLVLKHPDSEYVLNGRNRDWIKVKPEYMDNMGETVDVLVVGWSNC 471
Query: 124 -------------GYYGSGRRGGEVAQFLVA-LAERPAPDTYPRRFISFCRVGTGLSDEE 169
G YG+GRR G V+ + A L +R D ++ +F R+G+GLS
Sbjct: 472 CSTNLFATNSKKAGNYGTGRRAGGVSTLICAVLDDRHPEDDDESKYSTFVRIGSGLS--Y 529
Query: 170 LDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKE-RPDVWIESPEKSIILSITSDIRTIR 228
D + + + + + + PPSF V+ +E + DV++E PE S I+ + + +
Sbjct: 530 ADYIWVRQRSW---KTWDLKNPPSFLHVSKRGQEDKGDVYLE-PEDSFIIKVKA-AEIVT 584
Query: 229 SEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQ 288
S+ + ++RFPR ++R D DC+ + +E + S QK K L+DD K
Sbjct: 585 SDQYHMGLTMRFPRALKIRDDLDVSDCMRASAVLEGLRSE----QKRK----LEDDDGKP 636
Query: 289 FRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLD----SLHKM 344
+ ++ K +S++P + V +++ ET + M F + P + S + L ++
Sbjct: 637 KKKQKR-TAKKISLMP-EYQGIKVKNVEIETDLLEGMKFMVASDPKSRSGEEDKKQLLQL 694
Query: 345 VVENGGTFSMNLNNS----VTHCVAADNKGLKYEAAKRRGDVIHYSWVLDCCSQKKLLQL 400
+ +GG++ + V + A+ +K K D+I W++DC ++ L+ +
Sbjct: 695 IHAHGGSYVQVVKADPEILVVYGGASTPYDIKLIMNKGICDIIKPQWIMDCIARGDLIPM 754
Query: 401 QPKYYLHLSD 410
KY+ H ++
Sbjct: 755 SKKYFFHATE 764
>gi|242206836|ref|XP_002469273.1| predicted protein [Postia placenta Mad-698-R]
gi|220731733|gb|EED85575.1| predicted protein [Postia placenta Mad-698-R]
Length = 980
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 111/419 (26%), Positives = 203/419 (48%), Gaps = 41/419 (9%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLK---------LKPEYIRA- 113
D+V ++ + +R EG+V+K S++ R+ W+K +KPEY+ +
Sbjct: 388 GRTADDVRTRMEDIMASRGEGLVIKHPNSQYVLSGRNSDWIKASCWTRGFNVKPEYMDSM 447
Query: 114 GSDLDVLIIGGYYGSGRRGGEVAQFLVALAE--RPAPDTYPRRFISFCRVGTGLSDEELD 171
G +DV+++ G YG+GRR G V+ + A+ + RPA + P ++ +F R+GTGLS D
Sbjct: 448 GETVDVIVVAGNYGTGRRSGGVSTLVCAVVDDRRPADEVEP-KYSTFVRIGTGLS--YAD 504
Query: 172 AVVTKLKPYFRKYEYPKRAPPSFYQVT-NNSKERPDVWIESPEKSIILSITSDIRTIRSE 230
+ + KP+ K PK PPSF QV S+++ DV++E P+ S +L I + S+
Sbjct: 505 YIWVRQKPW--KTWDPKN-PPSFIQVAKKGSEDKGDVYLE-PQDSFLLKIKA-AEITNSD 559
Query: 231 VFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFR 290
++ ++RFPR ++R D DC + E + S +K + L D +
Sbjct: 560 LYHMGVTMRFPRAIQIREDLDTSDCTTATAVFESLRSDR--KRKMSDTDELS-DCVNPKK 616
Query: 291 SSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDS----LHKMVV 346
R+ KK V ++P + + D++ E+ +F M F + P + + + L +M+
Sbjct: 617 KQRRTTKKPVILLP-QYQSLKLEDVEVESDLFEGMTFMVSSDPKSRTGEQDKKELLRMIR 675
Query: 347 ENGGTF-SMNLNNS---VTHCVAADNKGLKYEAAKRRGDVIHYSWVLDCCSQKKLLQLQP 402
NGG + M NN V + +K + D+I W+ + ++ + + L
Sbjct: 676 ANGGKYVQMAKNNPDVLVVYGGTITPYDIKLIMNRDVCDIIKPQWIRESVTKSERMPLTK 735
Query: 403 KYYLHLSDSSKKKLQEEVDEFSDLYFWDLDLADI-KQLLSNVDRS----EDPKTIDYYK 456
+Y+ H ++ ++++E+ D +L L D ++ L D+ EDP D++K
Sbjct: 736 RYFFH---ATSRRMEEDEYVQDDGSLEELALTDQHEEPLETNDKGDATQEDPSIADWFK 791
>gi|240275395|gb|EER38909.1| DNA ligase [Ajellomyces capsulatus H143]
Length = 940
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 98/343 (28%), Positives = 169/343 (49%), Gaps = 20/343 (5%)
Query: 63 VAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLI 121
+ H+ +++ ++ + EG+VLK+ S + +R W+K+KPEY+ G LD ++
Sbjct: 447 IGHSAADIDPLLRKVVAEASEGLVLKNPNSPYRLNERHDDWMKVKPEYMTEFGESLDCIV 506
Query: 122 IGGYYGSGRRGGEVAQFLVAL---AERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLK 178
IGGYYGSGRRGG ++ FL L +P + SFC+VG G + + +
Sbjct: 507 IGGYYGSGRRGGALSSFLCGLRVDGSHSKTGDHPTKCYSFCKVGGGFTAADYANIRHHTD 566
Query: 179 PYFRKYEYPKRAPPSFYQVTNN--SKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPY 236
+ ++ PKR P + ++ ERPDVWI+ PE S++L + + ++ F
Sbjct: 567 GKWMDWD-PKRPPTEYIELAGGDLQYERPDVWIK-PEDSVVLCVKAS-SVSSTDQFRLGL 623
Query: 237 SLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGE 296
++RFPR R+R DK W L +Q F++L S+ K KE+ + D ++ R RK
Sbjct: 624 TVRFPRFKRLRMDKDWRSALSIQEFMDL-KSNVEREVKEKEF---KVDDSRKVR-HRKTV 678
Query: 297 KKNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFVNVP---PAYSLDSLHKMVVENGGTFS 353
KK ++I + + + +F + F+F+ P + L ++V NGG
Sbjct: 679 KKPLTIA-GYDGGKKIEYVGPSGKLFDGLNFFFMTESVHQPKKTKAQLEQLVKANGGKIY 737
Query: 354 MNLNNSVTHCVAADNKGLKYEAAKRRG--DVIHYSWVLDCCSQ 394
N + AD + +K + ++ ++I SW+ DC +Q
Sbjct: 738 QTNNVAENTICIADRRTVKVASLQKNAKENIIRPSWLFDCLTQ 780
>gi|156847073|ref|XP_001646422.1| hypothetical protein Kpol_2001p71 [Vanderwaltozyma polyspora DSM
70294]
gi|156117098|gb|EDO18564.1| hypothetical protein Kpol_2001p71 [Vanderwaltozyma polyspora DSM
70294]
Length = 726
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/213 (34%), Positives = 111/213 (52%), Gaps = 24/213 (11%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSD 116
SL+ +DE++KF + I++ EG+++K L S++EP RS WLKLK +Y+ G
Sbjct: 520 SLITAELDEIQKFLDQAIKDSCEGLMVKILDGEESRYEPSKRSRNWLKLKKDYLAGVGDS 579
Query: 117 LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTK 176
LD+ ++G YYG G+R G FL+ + + + + + C++GTG SDE ++TK
Sbjct: 580 LDLCVMGAYYGKGKRTGTYGGFLLGCYNQDSGE-----YETCCKIGTGFSDE----MLTK 630
Query: 177 LKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSD-----IRTIRSEV 231
L FR+ E P SFY +S PD+W E K + +T+D I S
Sbjct: 631 LYELFREEEI--EVPKSFYNF--DSSAEPDIWFEP--KVLFEVLTADLSLSPIYKAGSAT 684
Query: 232 FSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
+ SLRFPR R+R DK D +E+
Sbjct: 685 YDKGISLRFPRFLRIRDDKSVEDATSSDQIIEM 717
>gi|302685936|ref|XP_003032648.1| DNA ligase IV-like protein [Schizophyllum commune H4-8]
gi|300106342|gb|EFI97745.1| DNA ligase IV-like protein [Schizophyllum commune H4-8]
Length = 1065
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/358 (25%), Positives = 174/358 (48%), Gaps = 29/358 (8%)
Query: 69 EVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIGGYYG 127
++ + E + NR EG+V+K S++ R+ W+K+KPEY+ G +DVL++ G YG
Sbjct: 437 DIREKMDEVMANRGEGLVIKHPKSQYVLNGRNNDWIKVKPEYMDNMGETVDVLVVAGNYG 496
Query: 128 SGRRGGEVAQFLVALAERPAPDTY---PRRFISFCRVGTGLSDEELDAVVTKLKPYFRKY 184
SGRR G V+ + A+ + ++ ++ +F RVG+GL+ D + + K +
Sbjct: 497 SGRRSGGVSTLICAVFDDRNTGSFNENESKYATFVRVGSGLT--YADYMWLRAKNW---K 551
Query: 185 EYPKRAPPSFYQVTNNSKE-RPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRI 243
+ + P++ Q S E + DV++E E + IL + + S+ + Y++RFPR
Sbjct: 552 TWDAKNSPTYLQTAKRSHEDKGDVYLEY-EDTFILKVKA-AEITPSDQYHVRYTMRFPRA 609
Query: 244 DRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIV 303
+R + DC+ + VE + ++ + + RK KK V ++
Sbjct: 610 LSIREEMAPGDCMTASAVVEQLKTAKKRKMETNKVSST---------KKRKVVKKKVEML 660
Query: 304 PSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLD----SLHKMVVENGG---TFSMNL 356
P F D+ D+K E+ +F M F ++ P A + + L K++ +GG F+ +
Sbjct: 661 P-RFDGPDMKDVKEESDLFKGMKFVVISDPKARTGEEDRKKLMKLIRSHGGQCPQFAKDP 719
Query: 357 NNSVTHCVAADNKGLKYEAAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKK 414
V + + L+ K DV+ WV+DC ++ +L+ ++ KY+ + + K+
Sbjct: 720 AAIVVYNGTSTPYDLQLIIRKDTNDVVRPQWVMDCIAKGELVPMEKKYFFFATTARKE 777
>gi|225561792|gb|EEH10072.1| DNA ligase [Ajellomyces capsulatus G186AR]
Length = 961
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 99/343 (28%), Positives = 169/343 (49%), Gaps = 20/343 (5%)
Query: 63 VAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLI 121
+ H+ +++ ++ + EG+VLK+ S + +R W+K+KPEY+ G LD ++
Sbjct: 468 IGHSAADIDPLLRKVVAEASEGLVLKNPNSPYRLNERHDDWMKVKPEYMTEFGESLDCIV 527
Query: 122 IGGYYGSGRRGGEVAQFLVAL---AERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLK 178
IGGYYGSGRRGG ++ FL L +P + SFC+VG G + + +
Sbjct: 528 IGGYYGSGRRGGALSSFLCGLRVDGSHSKTGDHPTKCYSFCKVGGGFTAADYANIRHHTD 587
Query: 179 PYFRKYEYPKRAPPSFYQVTNN--SKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPY 236
+ ++ PKR P + ++ ERPDVWI+ PE S++L + + T ++ F
Sbjct: 588 GKWMDWD-PKRPPTEYIELAGGDLQYERPDVWIK-PEDSVVLCVKASSVT-STDQFRLGL 644
Query: 237 SLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGE 296
++RFPR R+R DK W L +Q F++L S+ K KE+ + D ++ R RK
Sbjct: 645 TVRFPRFKRLRMDKDWRSALSIQEFMDL-KSNVEREVKEKEF---KVDDSRKVR-HRKTI 699
Query: 297 KKNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFVNVP---PAYSLDSLHKMVVENGGTFS 353
KK ++I + + + +F + F+ + P + L ++V NGG
Sbjct: 700 KKPLTIA-GYDGGKKIEYVGPSGKLFDGLNFFIMTESVHQPKKTKAQLEQLVKANGGKIY 758
Query: 354 MNLNNSVTHCVAADNKGLKYEAAKRRG--DVIHYSWVLDCCSQ 394
N + AD + +K + ++ +VI SW+ DC +Q
Sbjct: 759 QTNNVAENTICIADRRTVKVASLQKNAQENVIRPSWLFDCLTQ 801
>gi|310789638|gb|EFQ25171.1| DNA ligase I [Glomerella graminicola M1.001]
Length = 986
Score = 112 bits (280), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 136/544 (25%), Positives = 252/544 (46%), Gaps = 56/544 (10%)
Query: 63 VAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLI 121
VA + D +E ++ + EG+VLK+ S + R+ WLK+KPEY+ G LD ++
Sbjct: 465 VATSPDAIEPLLRKVVAEASEGLVLKNPRSMYRLNSRNDDWLKVKPEYMSEFGESLDCVV 524
Query: 122 IGGYYGSGRRGGEVAQFLVAL---AERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLK 178
IGGYYGSGRRGG ++ FL L P + SF +VG G + + +
Sbjct: 525 IGGYYGSGRRGGALSSFLCGLRVSENHIQAGANPEKCFSFFKVGGGFCANDYAEIRHRTD 584
Query: 179 PYFRKYEYPKRAPPSFYQVTNNSK--ERPDVWIESPEKSIILSITSDIRTIRSEVFSAPY 236
+ +++ ++ P + ++ + ERPDVWI + ++ + + I + S+ FS +
Sbjct: 585 GKWLQWD-TRKPPVEYIELAGGDRQFERPDVWIRPRDSVVVEAKAASIGS--SDQFSLGF 641
Query: 237 SLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGE 296
+LRFPR R+R DK W D L VQ F++L ++ KE +++ R S K
Sbjct: 642 TLRFPRFRRLRTDKNWDDGLSVQEFLDL---RKRVEEEAKEKTMSVENRK---RKSVKRV 695
Query: 297 KKNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFVN---VPPAYSLDSLHKMVVENGGTFS 353
K+ V+I + L K + +F + F ++ P + L ++ E+GG S
Sbjct: 696 KREVTIAGTENLPVQFEGQK--SKLFDGLEFCVLSESLKPFKKTKAQLETLIEEHGGRIS 753
Query: 354 MNLNNSVTHCVAADNKGLKYEAAKRRG------DVIHYSWVLDCCSQKK---LLQLQPKY 404
+ AD K +K + + G D+I W+ DC Q LL + ++
Sbjct: 754 QRAVPRSNMILVADKKVVKVASLLKEGQNNGGVDIIKPKWIQDCLEQADKSLLLPYEEQH 813
Query: 405 YLHLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNVDRSEDPKTIDYYKKKYC---- 460
LH +++ K + D + D Y D+ L +++ + ++ + E P T + K ++
Sbjct: 814 LLHATEALKTVALQNTDMYGDSYARDISLDELRAIFKSMPKRE-PDTEPFDKGQFVNQLL 872
Query: 461 ------PQDKWSCFHGCCIYFYHS-TEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNLA 513
Q + FH C +Y + + +E D ++L + + ++F G ++ ++
Sbjct: 873 ERGHDMGQLRGFLFHRCIVYLHDADSEGEGDDTKML------KFRNYLTFGGARLVSDAD 926
Query: 514 N--ATHVVVLSVLGYDVNFNSLTESFTAREKHLLWNKKL-HVVRSQWLEDCLAKEQKSEE 570
+ ATH+V++ + L E+ + + +++ ++V W+EDC ++ +E
Sbjct: 927 DEAATHIVLIGT------GDRLKEAAKGLRRQVSNRRRIPYIVTGAWVEDCWREKTLLDE 980
Query: 571 YEYS 574
Y
Sbjct: 981 ERYG 984
>gi|347964176|ref|XP_310455.4| AGAP000623-PA [Anopheles gambiae str. PEST]
gi|333466853|gb|EAA06537.4| AGAP000623-PA [Anopheles gambiae str. PEST]
Length = 914
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 99/386 (25%), Positives = 171/386 (44%), Gaps = 27/386 (6%)
Query: 57 EPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGK-WLKLKPEYIRA-G 114
E C + + + + I+ R EG+VLK + + P R+G W K+KP+Y+
Sbjct: 384 ERCRRVRVRDPPHLLELINGAIDERQEGVVLKREDAPYRPNRRAGTGWYKIKPDYVDGLV 443
Query: 115 SDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPR-RFISFCRVGTGLSDEELDAV 173
D D+L++GG+Y +R V FLV +A R T PR ++S +V GL E +
Sbjct: 444 VDFDLLVLGGFYN--QRRTYVNAFLVGVAAR----TTPRPEYLSVAKVSMGLGTLEWQQL 497
Query: 174 VTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFS 233
L+P++R + Q + PDVWI +P SI L + +RS+ ++
Sbjct: 498 NQTLRPHWRTGPVDGGDGGAVVQCGQTA---PDVWI-APADSITLQLRGS-ELVRSDSYA 552
Query: 234 APYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKG--------KEYGGLQDDK 285
A Y++RFPRI VR DK + + ++ S+ G K + L+D
Sbjct: 553 AGYTIRFPRIVTVRPDKLPDEVCTLDELEQVAGSNRAAPSAGGQRATKLAKRHVTLEDLS 612
Query: 286 PKQFRSSRKGEKKNVSIVP-SHFLQTDVSDIKGETSIFSDMVFYFVNV-PPAYSLDSLHK 343
S K +K ++V + + + G D+ V P A ++D+L +
Sbjct: 613 APPTVSKAKAPRKRAALVTFERNPEQEPPPLPGGMLHGRDVCVMSVGSQPGAATIDALER 672
Query: 344 MVVENGGTFSMNLNNSVTHCVAADNKGLKYEAAKRRG--DVIHYSWVLDCCSQKKLLQLQ 401
+V +GG N T+ + A K G DV+ W+L ++ +L +
Sbjct: 673 LVRRHGGRAVAN-PTPATYAIVAGRVTFKVRKYMETGRWDVVRDEWLLRAGTEGRLEAFR 731
Query: 402 PKYYLHLSDSSKKKLQEEVDEFSDLY 427
P+ L ++ ++ +L ++ D + D Y
Sbjct: 732 PEDMLSATEPTRMRLAQQYDRYGDSY 757
>gi|299744934|ref|XP_002910852.1| DNA ligase IV [Coprinopsis cinerea okayama7#130]
gi|298406355|gb|EFI27358.1| DNA ligase IV [Coprinopsis cinerea okayama7#130]
Length = 970
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 112/383 (29%), Positives = 178/383 (46%), Gaps = 61/383 (15%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLII 122
+++ K ++ +ENR EG+V+K +K+ R+ W+K+KPEY+ G +DVL++
Sbjct: 419 GETANDIRKRMEQVMENRGEGLVIKHPKAKYILNGRNTDWIKVKPEYMDNMGETVDVLVV 478
Query: 123 GGYYGSGRRGGEVAQFLVALAE--RPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPY 180
G YGSG+RGG V+ + A+ + RP D P SF R+GTGLS D V + KP+
Sbjct: 479 AGNYGSGKRGGGVSTLICAVMDDRRPDSDDEPN---SFVRIGTGLS--FADYVWVRSKPW 533
Query: 181 FRKYEYPKRAPPSFYQVTNNSKE-RPDVWIESPEKSI--ILSITSD-----IRTIRSEV- 231
K PK PP F Q +E + DV++E PE+S+ I I SD + +RS
Sbjct: 534 --KVWDPKN-PPEFLQTAKKGQEDKGDVYLE-PEESVGLIYRIHSDANGGSLYCVRSSFI 589
Query: 232 -------------FSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEY 278
+ +++RFPR +R D DC+ T GK Y
Sbjct: 590 LKVKAAEITPSDQYHMGFTMRFPRALAIRDDLSIADCM---------------TATGK-Y 633
Query: 279 GGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSL 338
L + RK K V+++P + ++ + +T IF+ M F + P + +
Sbjct: 634 PVLAGI--RITTKKRKTTVKKVALLP-EYSGPNLKKVAVKTDIFNGMKFVVFSDPKSRTG 690
Query: 339 DS----LHKMVVENGGTFSMNLNNS----VTHCVAADNKGLKYEAAKRRGDVIHYSWVLD 390
++ L K + NGGT S +N + V + + LK K DVI SW+ D
Sbjct: 691 EADKKELMKTIHANGGTCSQIVNKNSEAIVIYGGSITPYDLKLVIDKGIHDVIKPSWITD 750
Query: 391 CCSQKKLLQLQPKYYLHLSDSSK 413
+ + + KY+ H ++ K
Sbjct: 751 SVTLGEPAPFKKKYFFHATEERK 773
>gi|452821657|gb|EME28685.1| DNA ligase 4 [Galdieria sulphuraria]
Length = 913
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 101/408 (24%), Positives = 204/408 (50%), Gaps = 44/408 (10%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGK-WLKLKPEYIR-AGSDLDVLIIG 123
V+++++ ++ IE + EG+V+K+ + G R + +KLKP+Y DLDVLI+G
Sbjct: 406 TVEDIKQAMEDFIEQKYEGVVVKNKKKPYLLGKRDDEVMIKLKPDYFNDLVHDLDVLILG 465
Query: 124 GYYGSG----RRGGEVAQFLVALAERPAPD---TYPRRFISFCRVGTGLSDEELDAVVTK 176
+ G+G R G+ + FL+ + E+ + +I +VG+G S E+L+ + K
Sbjct: 466 AFIGTGYSKTTRIGKPSHFLIGILEKDIEEQDRNVEVSWIVIGKVGSGYSYEQLEQLQHK 525
Query: 177 LKPYFRKYEYPKRAPPSFYQVTN-NSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP 235
L P+++ Y+ K+APP + + + PD WIE P SI+L+I + +R +
Sbjct: 526 LAPFWKPYD--KKAPPEHLKHSLLRADGVPDFWIE-PCHSIVLTIYA--YEVRPSAIYSG 580
Query: 236 YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKG 295
Y++RFPR+ +R+DK W +C + EL S + GL+ +K ++ + +
Sbjct: 581 YAVRFPRVANIRWDKRWFEC---STLDELTRPSEPPS-ASYSVDGLKTNKKRRAQPHLR- 635
Query: 296 EKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGG----- 350
EK ++ VP+ + + +K + +V V K+V + GG
Sbjct: 636 EKVDLISVPT---RPEAFALKSSLCL-DGLVLCVVGASSNQEKQYYEKLVHQLGGKTVQS 691
Query: 351 -------TFSMNLNN-SVTHCVAADNKGLKYEAAKRRG-------DVIHYSWVLDCCSQK 395
+++ N+ +VT+ V + L+ +K R ++ +W+L+C +
Sbjct: 692 VTQDTRFVLAISPNHVAVTNMVRSFQNPLQAVKSKLRSRGCLEPKSILKVNWLLECQVKD 751
Query: 396 KLLQLQPKYYLHLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNV 443
+++++ P + + +DS +K+++ D + D + ++ ++++LLSN+
Sbjct: 752 RMVEILPCHVVWATDSLRKEIETRCDCWGDSWHKAVNEEELRELLSNM 799
>gi|295670397|ref|XP_002795746.1| DNA ligase [Paracoccidioides sp. 'lutzii' Pb01]
gi|226284831|gb|EEH40397.1| DNA ligase [Paracoccidioides sp. 'lutzii' Pb01]
Length = 977
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 146/574 (25%), Positives = 239/574 (41%), Gaps = 124/574 (21%)
Query: 63 VAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLI 121
+ + ++E ++ + EG+VLK+ S + +R W+K+KP+Y+ G LD ++
Sbjct: 468 IGRSTADIEPLLRKVVAEASEGLVLKNPNSPYRLNERHDDWMKVKPDYMTEFGESLDCVV 527
Query: 122 IGGYYGSGRRGGEVAQFLVAL---AERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLK 178
IGGYYGSGRRGG ++ FL L P + SFC+VG G + + +
Sbjct: 528 IGGYYGSGRRGGALSSFLCGLRVDGAHAKKGDKPTKCYSFCKVGGGFTAADYANIRHHTD 587
Query: 179 PYFRKYEYPKRAPPSFYQVTNN--SKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPY 236
+ ++ PK P + ++ ERPDVWI+ PE S++L I + + S+ F
Sbjct: 588 GKWMDWD-PKTPPTEYIELGGGDAQHERPDVWIK-PEDSVVLCIKA-AQVTPSDQFRLGL 644
Query: 237 SLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRK-- 294
+LRFPR R+R DK W L VQ F++ S+ K KE +P+ +S++K
Sbjct: 645 TLRFPRFKRLRMDKDWQSALTVQEFMDF-KSNVEKEVKEKELRFDDTSRPRHKKSTKKPL 703
Query: 295 ------GEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVEN 348
G KK PS +F + F+ V V SL K EN
Sbjct: 704 TVAGYEGGKKAAYASPS-------------GKLFDGLNFWTVKVA------SLQKNAKEN 744
Query: 349 GGTFSMNLNNSVTHCVAADNKGLKYEAAKRRGDVIHYSWVLDCCSQKK--------LLQL 400
V+ SW+ DC Q + L+ L
Sbjct: 745 ---------------------------------VVRPSWLFDCLKQNEIDQGLPDLLIPL 771
Query: 401 QPKYYLHLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNVD-------------RSE 447
+PK+ + ++++ VD++SD Y D+D++++ +LL + S
Sbjct: 772 EPKHMFFTTADQEEEIAGNVDKYSDSYARDVDVSELTKLLDEMPTVPNTTPSGISQLESH 831
Query: 448 DPKTIDYYKKKYCPQDKWSCFHGCCIYFYHSTEPLSPDWEVLLGLALRRLKLE------- 500
+D W F G IYF + P SP L +LR L+
Sbjct: 832 IGHMLDQTASFNNSSPGW-LFKGLVIYF-AAPRPASPS----LCSSLRNDNLKEEKQRLP 885
Query: 501 ---------ISFHGGKVC---NNLANA--THVVVLSVLGYDVNFNSLTESFTAREK---H 543
+ F GG+V N++ + TH+V+ S + D + TE R K
Sbjct: 886 QCLYLASNLVKFAGGQVITDDNDMTDPRITHIVIDSNI--DDKTTTTTEISAIRRKIATR 943
Query: 544 LLWNKKL-HVVRSQWLEDCLAKEQKSEEYEYSLK 576
NK++ H+V +W+E+ ++ +E ++ K
Sbjct: 944 TGMNKRIPHLVGVEWVEESWREKTLVDEDRFAPK 977
>gi|226294103|gb|EEH49523.1| DNA ligase [Paracoccidioides brasiliensis Pb18]
Length = 977
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 148/576 (25%), Positives = 243/576 (42%), Gaps = 128/576 (22%)
Query: 63 VAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLI 121
+ + ++E ++ + EG+VLK+ S + +R W+K+KP+Y+ G LD ++
Sbjct: 468 IGRSTADIEPLLRKVVAEASEGLVLKNPNSPYRLNERHDDWMKVKPDYMTEFGESLDCVV 527
Query: 122 IGGYYGSGRRGGEVAQFLVAL---AERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLK 178
+GGYYGSGRRGG ++ FL L P + SFC+VG G + + +
Sbjct: 528 VGGYYGSGRRGGALSSFLCGLRVDGAHAKKGDKPTKCYSFCKVGGGFTAADYANIRHHTD 587
Query: 179 PYFRKYEYPKRAPPSFYQVTNN--SKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPY 236
+ ++ PKR P + ++ + ERPDVWI+ PE S++L I + + S+ F
Sbjct: 588 GKWMDWD-PKRPPTEYIELGGDDAQHERPDVWIK-PEDSVVLCIKA-AQVTPSDQFRLGL 644
Query: 237 SLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRK-- 294
+LRFPR R+R DK W L VQ F++ S+ K KE +P+ +S++K
Sbjct: 645 TLRFPRFKRLRMDKNWQSALTVQEFMDF-KSNVEKEVKEKELRFDDTRRPRHKKSTKKPL 703
Query: 295 ------GEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVEN 348
G KK PS +F + F+ V V SL K EN
Sbjct: 704 TVAGYEGGKKTAYASPS-------------GKLFDGLNFWTVKVA------SLQKNAKEN 744
Query: 349 GGTFSMNLNNSVTHCVAADNKGLKYEAAKRRGDVIHYSWVLDCCSQKK--------LLQL 400
V+ SW+ DC Q + L+ L
Sbjct: 745 ---------------------------------VVRPSWLFDCLKQNEIDQGLPDLLIPL 771
Query: 401 QPKYYLHLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLL-----------SNVDRSED- 448
+PK+ + ++++ VD++SD Y D+D++++ +LL S++ + E
Sbjct: 772 EPKHMFFTTADQEEEIAGNVDKYSDSYARDVDVSELTKLLDEMPTVPNTTFSSISQLESH 831
Query: 449 -PKTIDYYKKKYCPQDKWSCFHGCCIYFYHSTEPLSPDWEVLLGLALRRLKLE------- 500
+D W F G IYF + +P SP + L LK E
Sbjct: 832 IGHMLDQTASFNNSSKGW-LFKGLVIYF-AAPQPASP--SLCSSLQNDNLKEEKQRLPQC 887
Query: 501 -------ISFHGGKVC---NNLAN--ATHVVVLSVLGYDVNFNS----LTESFTAREK-- 542
+ F GG+V N++ + TH+V+ D N + TE R K
Sbjct: 888 LYLASNLVKFAGGQVITDDNDMTDPRITHIVI------DANTDDKTIMATEISAIRRKIA 941
Query: 543 -HLLWNKKL-HVVRSQWLEDCLAKEQKSEEYEYSLK 576
NK++ H+V +W+E+ K+ +E ++ K
Sbjct: 942 TRTGINKRIPHLVGVEWVEESWRKKTLVDEDRFAPK 977
>gi|226478780|emb|CAX72885.1| ligase I, DNA, ATP-dependent [Schistosoma japonicum]
Length = 840
Score = 110 bits (276), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/233 (33%), Positives = 117/233 (50%), Gaps = 22/233 (9%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYIRA-GSDL 117
SL + ++DE+ F E I+ EG+++K L S +E RS WLKLK +Y+ G L
Sbjct: 619 SLDSSDIDEIATFLDEAIKGNCEGLMIKTLDHNSTYEIAKRSHSWLKLKKDYLEGVGDTL 678
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D+++IGG++G+G+R G +L+A + P+T + + C++GTG+ D++L
Sbjct: 679 DLVVIGGFHGTGKRAGRYGGYLLACYD---PET--EEYQTICKIGTGMKDDDL----ASF 729
Query: 178 KPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRSEVFS 233
YF+ + K P +YQ T S PD W E + K+ LSI+ + V
Sbjct: 730 SEYFKSHAVDKAKP--YYQYT--SSLIPDQWFEPVQVWEVKAADLSISPAHKAAAGLVDP 785
Query: 234 AP-YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGT-TQKGKEYGGLQDD 284
SLRFPR R+R DK D + EL S Q G YGG DD
Sbjct: 786 LKGVSLRFPRFIRIRDDKKPEDATTAKQVYELYQSQEQIKNQHGNAYGGNDDD 838
>gi|401623677|gb|EJS41768.1| dnl4p [Saccharomyces arboricola H-6]
Length = 946
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 112/429 (26%), Positives = 197/429 (45%), Gaps = 67/429 (15%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLII 122
+NV+ ++K + I EG+VLK+ S + R+ W+K+KPEY+ G +LD++II
Sbjct: 423 CYNVEAIKKSLEVAISLGSEGVVLKNYSSTYNVASRNSNWIKVKPEYLEEFGENLDLIII 482
Query: 123 GGYYG----------------SGRRGGEVAQFLV--ALAERPAPDTYPR--RFISFCRVG 162
G G +G++ E+ ++ A E+ D+ + + +SFC +
Sbjct: 483 GRDPGKKDSFMLGLLLLDEQETGQKNQEIPSQILNDASTEQQGIDSKKKVTKVVSFCSIA 542
Query: 163 TGLSDEELDAVVTKLKPYF-RKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSIT 221
G+S EE + K + ++ R ++P PP+ + + P WIE P +SI+L I
Sbjct: 543 NGISQEEFKEIDRKTRGHWKRTSDFP---PPT--SILQFGSKIPAEWIE-PSESIVLEIK 596
Query: 222 SDIRTIRS-----EVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGK 276
S R++ + + ++ +L R+RYDK W DC + E N T+
Sbjct: 597 S--RSLENTDTNIQRYATSCTLYGGYCRRIRYDKDWKDCYTLADLYE-----NRLTRPNP 649
Query: 277 EYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFV------ 330
+ Q KP Q + +K K+ +VP F QT + K +SIF+ + FY +
Sbjct: 650 SH---QVGKP-QLQLVQKKRKR--VLVPDPFHQT--REQKPISSIFTGLFFYVLSDYVTN 701
Query: 331 NVPPAYSLDSLHKMVVENGGTFSMNLNNSVTHCVA-----ADNKGLKYEAAKRRG-DVIH 384
+ + + L + ++GG N+ S HC+ + ++ A RG D++H
Sbjct: 702 DTGVRITQEELDDTIAKHGGKLIHNV-ISKRHCIGEVRLISCKNTIECRALIDRGYDILH 760
Query: 385 YSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEVDEFSDLYFWDLD------LADIKQ 438
+W+LDC + K+L+ ++P Y +S + VD +D + D+ L +Q
Sbjct: 761 PNWILDCIAYKRLILIEPSYCFSVSQKLRALAGRRVDCLNDSFENDISDRKLSLLFKTQQ 820
Query: 439 LLSNVDRSE 447
L VD E
Sbjct: 821 KLPTVDGVE 829
>gi|312383474|gb|EFR28549.1| hypothetical protein AND_03403 [Anopheles darlingi]
Length = 1027
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 110/409 (26%), Positives = 182/409 (44%), Gaps = 54/409 (13%)
Query: 72 KFFKETIENRDEGIVLKDLGSKWEPGDR-SGKWLKLKPEYIRA-GSDLDVLIIGGYYGSG 129
+ I+ EG+VLK + ++P R G W KLKP+Y+ D D+LI+GGYY
Sbjct: 405 QLLNTAIDGEQEGLVLKREDAIYQPNRRHGGGWYKLKPDYVDGLVVDFDLLILGGYYN-- 462
Query: 130 RRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKR 189
RR V FLV + + + D +++ +V GL E+ + L P++++ +
Sbjct: 463 RRRTFVNTFLVGVRDDSSSD-----YLTLAKVSMGLQAEQWAELNRTLAPHWQEVVAGQS 517
Query: 190 --APPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVR 247
A PS Q + PDVW+E P++SI+L + +RSE ++A ++LRFPRI +R
Sbjct: 518 NGADPSSPQYPRWGQTVPDVWLE-PKESIVLQLRGS-ELVRSESYAAGHTLRFPRILAIR 575
Query: 248 YDKPWHDCLDVQSFVELVHSSNG--------TTQKGKEYGGLQDDKPKQFRSSRKGEKKN 299
D+ ++D ++ + LV G T+ K + + D Q + KG K
Sbjct: 576 TDRRYNDVCTIEELLALVAVGPGGGTGDPRNVTKLAKRHVTIDDLTGGQ--GTTKGPSKR 633
Query: 300 VSIV-------------PSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVV 346
V P+ LQT + G F M + V ++ L +M+
Sbjct: 634 VRGAGRPLTIAAPNHRQPTEVLQTIDNACGGRE--FCVMSTHVVQP----TVAELERMIR 687
Query: 347 ENGGTFSMNLNNSVTHCVAADNKGLKYEAAKR--RGDVIHYSWVLDCC------SQKKLL 398
++GG N S T+ + A + K + R R DV+ W++ S ++
Sbjct: 688 QHGGRVVAN-PGSNTYAIVAGARTFKVDRYCRAARWDVVRVEWLMRAMGAGKEPSARQPG 746
Query: 399 QLQP--KYYLH-LSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNVD 444
Q++P LH ++ +++ L E D F D Y + K LL D
Sbjct: 747 QVEPFRPADLHAATEETQRWLAEHYDRFGDSYTRPVSPGTFKGLLQQPD 795
>gi|255588424|ref|XP_002534602.1| conserved hypothetical protein [Ricinus communis]
gi|223524943|gb|EEF27780.1| conserved hypothetical protein [Ricinus communis]
Length = 251
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/217 (37%), Positives = 124/217 (57%), Gaps = 25/217 (11%)
Query: 628 ASPKREGKRKRGRPAGGSAKKRKSTVNLARRKRPHVRN-KPSKIYQNESDESNASDETEK 686
+SPK++ KRKRG PAG S K+ K V L++ RP R KP KI SDE+N+ D+ K
Sbjct: 39 SSPKKDAKRKRGGPAGRSVKEGK--VGLSQAPRPRSRGRKPVKICDTGSDENNSYDD--K 94
Query: 687 KEEINREENHEDREMDDEENLETRQTNVVEDLESLDRGKALQQEVVKDFGKEKQTVRAPD 746
+E + E+ E+ E+ + + ED ES ++EV + ++ +APD
Sbjct: 95 ADEARIQLGKENHEIHAEKKISEIKQIGGEDTESAHIHNIAEKEVTEGNRLQEWDDKAPD 154
Query: 747 IEMRERYHSKD------------------SETTDKQQ--VDAVQAMLLDMIPSLGMKNEK 786
E+R+R+ ++D E DK + VD + AMLLDMIPSLG++N +
Sbjct: 155 AEIRKRHQNRDFQSDKTHSEIGGRHDVEEKENPDKLEIMVDPIHAMLLDMIPSLGVRNVE 214
Query: 787 TTNPIPKEESSSAEPSAEPTKKKKVSYKDIASKLLKD 823
+N + + E + +P+A+P KKKKVSYKD+AS++LKD
Sbjct: 215 ISNQVFEREKPAGDPTAQPVKKKKVSYKDVASEMLKD 251
>gi|401843019|gb|EJT44979.1| CDC9-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 755
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 103/210 (49%), Gaps = 20/210 (9%)
Query: 62 LVAHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDL 117
++ +N+DE++KF E++ N EG+++K L S +EP RS WLKLK +Y+ G L
Sbjct: 550 IITNNLDELQKFLDESVNNSCEGLMVKMLDGPESHYEPSKRSRNWLKLKKDYLEGVGDSL 609
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D+ ++G YYG G+R G FL+ + + F + C++GTG SDE L + +L
Sbjct: 610 DLCVLGAYYGRGKRTGTYGGFLLGCYNQDTGE-----FETCCKIGTGFSDEMLQLLHERL 664
Query: 178 KPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSI---TSDIRTIRSEVFSA 234
P + PK ++ PDVW E +L+ S I S F
Sbjct: 665 TPTI--IDGPKAT------FVFDASAEPDVWFEPTTLFEVLTADLSLSPIYKAGSATFDK 716
Query: 235 PYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
SLRFPR R+R DK D +EL
Sbjct: 717 GVSLRFPRFLRIREDKGVEDATSSDQIIEL 746
>gi|409081487|gb|EKM81846.1| hypothetical protein AGABI1DRAFT_70360 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1918
Score = 110 bits (274), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 94/366 (25%), Positives = 174/366 (47%), Gaps = 42/366 (11%)
Query: 69 EVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIGGYYG 127
++ + +E + R EG+++K SK+ R W+K+KPEY+ G +D+L++ G YG
Sbjct: 424 DIRERMEEVMAARGEGLIIKHPLSKYTLNGRIMDWIKVKPEYMDNMGETVDLLVVAGNYG 483
Query: 128 SGRRGGEVAQFLVALAERPA--PDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYE 185
+G+RGG V+ + A+ E D ++ +F R+G+GLS D V + KP+
Sbjct: 484 TGKRGGGVSTLICAVFEDRGIDEDDDEPKYSTFVRIGSGLS--YADYVWIRAKPW---KV 538
Query: 186 YPKRAPPSFYQVTNNSKE-RPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRID 244
+ ++ PSF +S E + D+++E PE S I+ I + + S+ + +++RFPR
Sbjct: 539 WNEQQNPSFLLTEKHSHEDKGDLFLE-PEDSFIVKIKA-AEIVPSDQYYMGFTMRFPRAM 596
Query: 245 RVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKG--------E 296
+R D DC+ + +E G++ ++ ++ S G +
Sbjct: 597 SIRDDLTIADCMTASAVLE----------------GMKTERKRKMESDITGLHPKRSAKK 640
Query: 297 KKNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLD----SLHKMVVENGGTF 352
+K +I+P + ++ ++ E++IF M F ++ P + S D L K++ NGG
Sbjct: 641 RKKATIIP-QYQGPNLKNVSIESNIFDGMKFVVMSDPKSRSGDRVRRDLMKLIHANGGMC 699
Query: 353 S--MNLNNSVTHCVAADNKGLKYEAAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSD 410
+ + V + LK K DVI SW+ D S ++ KY+ H +
Sbjct: 700 AQIVKPETFVIYGGTVMPYDLKLVVQKNINDVIKPSWIKDSISLGEIAPFHHKYFFHATP 759
Query: 411 SSKKKL 416
K ++
Sbjct: 760 GRKHEI 765
>gi|256079975|ref|XP_002576259.1| DNA ligase IV [Schistosoma mansoni]
gi|353230062|emb|CCD76233.1| putative DNA ligase IV [Schistosoma mansoni]
Length = 848
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 130/250 (52%), Gaps = 28/250 (11%)
Query: 60 WSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSK--WEPGDRS-GKWLKLKPEYIRAG-S 115
W + + EV + F ++N EG+++K S + PG R+ G W K+KP+YI+
Sbjct: 432 WYTASAHQTEVARAFNHLVDNHQEGLIVKIANSPSLYLPGIRTDGGWWKIKPDYIQGLLE 491
Query: 116 DLDVLIIGGYYGSGRRGGE----VAQFLVAL-----AERPAPDTYP-RRFISFCRVGTGL 165
DLD LI+GGY+ RG + V FL A+ E + D + RF +FC+V +GL
Sbjct: 492 DLDCLIVGGYFH--HRGDKIITRVNHFLCAVRNDESYESTSEDNFTLTRFYTFCKVKSGL 549
Query: 166 SDEELDAVVTKLKPYFRKYE--YPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSD 223
+ ++L + L +++ Y+ +P + + V + ERPDVWI +P S++L +
Sbjct: 550 TVKQLKEINQLLGKHWKVYDKKHPNSSSTEWLCV---NSERPDVWI-APRSSLVLQL-HG 604
Query: 224 IRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGK-----EY 278
I+S+ +S +LRFPR+ +R+DK W D L + ++L + G + +
Sbjct: 605 AELIQSDSYSCGITLRFPRVVAIRHDKNWRDSLSMSELIKLNTETEGKLATKRLSIVPTF 664
Query: 279 GGLQDDKPKQ 288
GL D + +Q
Sbjct: 665 SGLADVEHQQ 674
>gi|170086844|ref|XP_001874645.1| DNA ligase IV [Laccaria bicolor S238N-H82]
gi|164649845|gb|EDR14086.1| DNA ligase IV [Laccaria bicolor S238N-H82]
Length = 1059
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 99/387 (25%), Positives = 176/387 (45%), Gaps = 50/387 (12%)
Query: 69 EVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIGGYYG 127
++ K E + NR EG+V+K SK+ R+ W+K+KPEY+ G +DVL++ G YG
Sbjct: 432 DIRKRMDEVMGNRGEGLVIKHPLSKYVLNGRNMDWIKVKPEYMDNMGETVDVLVVAGNYG 491
Query: 128 SGRRGGEVAQFLVALAE--RPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYE 185
+G+RGG V+ + A+ + R D ++ +F R+G+GLS D V + KP+ K
Sbjct: 492 TGKRGGGVSTLICAVLDDRRANEDDEEPKYSTFVRIGSGLS--FADYVWVRDKPW--KVW 547
Query: 186 YPKRAPPSFYQVTNNSKE-RPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRID 244
PK PP F Q + E + D+++E PE S IL + + S+ + +++RFPR
Sbjct: 548 DPKH-PPEFLQTAKRTHEDKGDLYLE-PEDSFILKVKA-AEITPSDQYHMGFTMRFPRAL 604
Query: 245 RVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVP 304
+R D DC+ + E + S +K + G+ S ++ + V
Sbjct: 605 SIRDDLSIADCMTATAVFESLRSEK--KRKMESDAGVS--------SKKRKTTAKKATVL 654
Query: 305 SHFLQTDVSDIKGETSIFSDMVF-----------YFVNVPPAYSLD-----------SLH 342
+ ++ ++ +T I + F + + P D L
Sbjct: 655 PAYKGPNLKGVRVKTDILDGLKFGELLASCSIYQVLIRLTPVVMADPKSRTGDEERKELM 714
Query: 343 KMVVENGGTFSMNLNNSVTHCVAADNKGLKYEAA----KRRGDVIHYSWVLDCCSQKKLL 398
K++ NGG+ + NN + + + Y+ K DVI +W+ D + +
Sbjct: 715 KLIHANGGSCAQVANNQPELFIVYEGNTIPYDLKLLIDKNVYDVIKPNWITDSVALGEPA 774
Query: 399 QLQPKYYLHLSD---SSKKKLQEEVDE 422
L+ KY+ +D S+ + +QE+ D+
Sbjct: 775 PLRKKYFFRATDERASTDEYMQEDEDQ 801
>gi|357609382|gb|EHJ66418.1| putative DNA ligase IV [Danaus plexippus]
Length = 1298
Score = 109 bits (272), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 123/511 (24%), Positives = 215/511 (42%), Gaps = 71/511 (13%)
Query: 69 EVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIGGYYG 127
EV + I+N+DEGIV+KD+ S + R+ W K+KPEY +DLD++++G
Sbjct: 833 EVVDAVNDAIDNQDEGIVVKDINSYYIANKRNAGWYKIKPEYTDDTMNDLDLVVVGADEA 892
Query: 128 SGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYP 187
+ +R G F VA + D + RV GL EE + V + L+ + Y
Sbjct: 893 TNKRQGRAKSFYVACGDNNDGDPV---WTCIGRVSNGLKHEEKERVCSLLERNWCMYR-- 947
Query: 188 KRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA--PYSLRFPRIDR 245
K+ PP + K++PD WI PE SI+L + + +E+ S + LRFPR++
Sbjct: 948 KKPPPPCLRF---GKDKPDFWI-LPEHSIVLQVRA------TELLSVGDSHVLRFPRVED 997
Query: 246 VRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPS 305
+R DKP D + +L S + ++ + ++ ++G K V V
Sbjct: 998 IRSDKPVDDVCTIHELRQLAVSRSPVSKLSTKRVNESQIDQNYIKTRKRGLSKTVQ-VAE 1056
Query: 306 HFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMNLNNSVTHCVA 365
F + D++ + ++ L +++ +GG N + CV
Sbjct: 1057 KFRTKTIGDVQVISRALFGKKLCVLSDDEDCKKTELKRVIESHGGRHVENPGSDTWCCVV 1116
Query: 366 ADNKGLKYEAAKRRG-----DVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEV 420
G A+R D+I +W+ + QL P L + +K KL +
Sbjct: 1117 ----GTITPRARRLIETQDLDIISTAWLRSLPATDDPCQLSPLDMLSIKPETKLKLSLDY 1172
Query: 421 DEFSDLYFWDLDLADIKQLLSNVDRSEDP------KTIDYYKKKYCPQDKWSCFHGCCIY 474
D F D Y ++D +K+LL +D SE P + + K+ + + +S C I+
Sbjct: 1173 DPFGDSYKDEIDEKTLKKLLDKMD-SEFPLYPTLKEKVCLDKQLFGANNPYSFLRNCFIH 1231
Query: 475 FYHSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCN-NLANATHVVVLSVLGYDVNFNSL 533
++ +E + SF G K+C+ + THVV+
Sbjct: 1232 VIDNSL-----YETM-----------ASFFGAKICSLDDVRLTHVVM------------- 1262
Query: 534 TESFTAREKHLLWNKKLHVVRSQWLEDCLAK 564
+++ ++ +K + +V WLE+C K
Sbjct: 1263 -----SKDANVKIDKGI-LVSDGWLEECFNK 1287
>gi|358058474|dbj|GAA95437.1| hypothetical protein E5Q_02090 [Mixia osmundae IAM 14324]
Length = 1026
Score = 109 bits (272), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 100/403 (24%), Positives = 176/403 (43%), Gaps = 38/403 (9%)
Query: 23 NISTVAMNDGICVCVHVYMLSQ----LRSQIMAADQTGEPCWSLVAHNVDEVEKFFKETI 78
+I V DG+ + Y L + LR+ + E ++ ++D++++ +
Sbjct: 472 DILLVKGADGVVYNLAQYPLQKRKEALRTLVKPIKGYIEFAHAVEGASLDDIKREMDVVL 531
Query: 79 ENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQ 137
+ EG+V+K + + PG R+ W+KLKPEY+ A DLD++I+G + G GRRGG
Sbjct: 532 QASGEGLVIKHPLTLYLPGQRNEAWIKLKPEYMDALWEDLDLIIVGAFLGEGRRGGMYGS 591
Query: 138 FLVALAERPAPDTYPRRFISFCRVGTGL---------SDEELDAVVTKLKPYFRKYEYPK 188
F VA + + + + +VG+G S +E + TK +P
Sbjct: 592 FAVACLDDQLSTEDHKVYANVAKVGSGFKYTDYVNFYSGDEFKNLWTK---------FPA 642
Query: 189 RAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRY 248
R P + + E+PD +I+ P KSI++++ + + + A +LRFPR +R
Sbjct: 643 RGQPDPSSLKFGA-EKPDYYID-PAKSIVVTVKASSLVRDAVNYGAEVTLRFPRCTAIRT 700
Query: 249 DKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFL 308
DK D + S E + T++ + G R R ++K VS S
Sbjct: 701 DKDIEDIETLTSVWERL------TKRKQRLGATTTKLDGHLR-RRVQKRKAVSSEASGDS 753
Query: 309 QTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMNLNNSVTHCVAADN 368
Q S+ + ++ IF + F + P + L +V +GG + + A
Sbjct: 754 QLPRSESQLKSRIFKGLTFLVMEDGPTATKKQLEILVATHGGEYRQVPPIEDNRRIIAHR 813
Query: 369 KGLKYEAAKRRGD----VIHYSWVLDCCSQKKLLQLQPKYYLH 407
L + +R + +I WV+DC ++ L L +Y LH
Sbjct: 814 --LNFHRVRRLSEKGETIIRPEWVMDCVDARRKLPLLEEYVLH 854
>gi|358058473|dbj|GAA95436.1| hypothetical protein E5Q_02091 [Mixia osmundae IAM 14324]
Length = 1027
Score = 109 bits (272), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 99/403 (24%), Positives = 175/403 (43%), Gaps = 38/403 (9%)
Query: 23 NISTVAMNDGICVCVHVYMLSQ----LRSQIMAADQTGEPCWSLVAHNVDEVEKFFKETI 78
+I V DG+ + Y L + LR+ + E ++ ++D++++ +
Sbjct: 472 DILLVKGADGVVYNLAQYPLQKRKEALRTLVKPIKGYIEFAHAVEGASLDDIKREMDVVL 531
Query: 79 ENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQ 137
+ EG+V+K + + PG R+ W+KLKPEY+ A DLD++I+G + G GRRGG
Sbjct: 532 QASGEGLVIKHPLTLYLPGQRNEAWIKLKPEYMDALWEDLDLIIVGAFLGEGRRGGMYGS 591
Query: 138 FLVALAERPAPDTYPRRFISFCRVGTGL---------SDEELDAVVTKLKPYFRKYEYPK 188
F VA + + + + +VG+G S +E + TK +P
Sbjct: 592 FAVACLDDQLSTEDHKVYANVAKVGSGFKYTDYVNFYSGDEFKNLWTK---------FPA 642
Query: 189 RAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRY 248
R P + + E+PD +I+ P KSI++++ + + + A +LRFPR +R
Sbjct: 643 RGQPDPSSLKFGA-EKPDYYID-PAKSIVVTVKASSLVRDAVNYGAEVTLRFPRCTAIRT 700
Query: 249 DKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFL 308
DK D++ L T++ + G R R ++K VS S
Sbjct: 701 DK------DIEDIETLTSVWERLTKRKQRLGATTTKLDGHLR-RRVQKRKAVSSEASGDS 753
Query: 309 QTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMNLNNSVTHCVAADN 368
Q S+ + ++ IF + F + P + L +V +GG + + A
Sbjct: 754 QLPRSESQLKSRIFKGLTFLVMEDGPTATKKQLEILVATHGGEYRQVPPIEDNRRIIAHR 813
Query: 369 KGLKYEAAKRRGD----VIHYSWVLDCCSQKKLLQLQPKYYLH 407
L + +R + +I WV+DC ++ L L +Y LH
Sbjct: 814 --LNFHRVRRLSEKGETIIRPEWVMDCVDARRKLPLLEEYVLH 854
>gi|190405162|gb|EDV08429.1| DNA ligase [Saccharomyces cerevisiae RM11-1a]
Length = 755
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 103/210 (49%), Gaps = 20/210 (9%)
Query: 62 LVAHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDL 117
+ +N+DE++KF E++ + EG+++K L S +EP RS WLKLK +Y+ G L
Sbjct: 550 ITTNNLDELQKFLDESVNHSCEGLMVKMLEGPESHYEPSKRSRNWLKLKKDYLEGVGDSL 609
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D+ ++G YYG G+R G FL+ + + F + C++GTG SDE L + +L
Sbjct: 610 DLCVLGAYYGRGKRTGTYGGFLLGCYNQDTGE-----FETCCKIGTGFSDEMLQLLHDRL 664
Query: 178 KPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSI---TSDIRTIRSEVFSA 234
P + PK +S PDVW E +L+ S I S F
Sbjct: 665 TPTI--IDGPKAT------FVFDSSAEPDVWFEPTTLFEVLTADLSLSPIYKAGSATFDK 716
Query: 235 PYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
SLRFPR R+R DK D + VEL
Sbjct: 717 GVSLRFPRFLRIREDKGVEDATSSEQIVEL 746
>gi|406601860|emb|CCH46521.1| DNA ligase 1 [Wickerhamomyces ciferrii]
Length = 768
Score = 108 bits (271), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 107/209 (51%), Gaps = 18/209 (8%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLKDLGSK-WEPGDRSGKWLKLKPEYIRA-GSDLD 118
S + +VDE++ F E++++ EG+++K L S + P RS WLKLK +Y+ G LD
Sbjct: 565 SKITSDVDELQTFLDESVKSACEGLMVKTLDSDPYRPSQRSNSWLKLKKDYLEGVGDSLD 624
Query: 119 VLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLK 178
+++IG YYG G+R G FL+A + + + + + C++GTG SDE L + KL
Sbjct: 625 LVVIGAYYGRGKRTGTYGGFLLASYNQDSGE-----YETCCKIGTGFSDEMLKTLYEKLS 679
Query: 179 PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSI---TSDIRTIRSEVFSAP 235
+ E PK + T +S PDVW E +L+ S + +EVF
Sbjct: 680 K--TEIEDPKS------EFTFDSSAEPDVWFEPSTLFEVLTADLSLSPVYKAGAEVFGRG 731
Query: 236 YSLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
SLRFPR R+R DK D VE
Sbjct: 732 VSLRFPRFLRIRDDKSPEDATSSDQVVEF 760
>gi|366989161|ref|XP_003674348.1| hypothetical protein NCAS_0A14110 [Naumovozyma castellii CBS 4309]
gi|342300211|emb|CCC67969.1| hypothetical protein NCAS_0A14110 [Naumovozyma castellii CBS 4309]
Length = 753
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/226 (33%), Positives = 111/226 (49%), Gaps = 22/226 (9%)
Query: 55 TGEPCWS--LVAHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPE 109
TGE ++ + + N+DE++KF +++ + EG+++K L S +EP RS WLKLK +
Sbjct: 540 TGEFQYATEMTSSNLDELQKFLDQSVHDSCEGLMVKMLDGIESHYEPSKRSRNWLKLKKD 599
Query: 110 YIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDE 168
Y+ G LD+ +IG YYG G+R G FL+ + DT F + C++GTG SDE
Sbjct: 600 YLEGIGDSLDLCVIGAYYGRGKRTGMYGGFLLGCYNQ---DT--GEFETCCKIGTGFSDE 654
Query: 169 ELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSI---TSDIR 225
L + T+L P + PK +S PDVW E +L+ S I
Sbjct: 655 MLQQLYTRLTPTV--LDGPKAT------FVYDSSAEPDVWFEPTLLFEVLTADLSLSPIY 706
Query: 226 TIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGT 271
S + SLRFPR R R DK D + +EL + T
Sbjct: 707 KAGSSTYDKGISLRFPRFIRTREDKGVEDATSSEQIIELYENQAHT 752
>gi|294654642|ref|XP_456702.2| DEHA2A08602p [Debaryomyces hansenii CBS767]
gi|199429037|emb|CAG84658.2| DEHA2A08602p [Debaryomyces hansenii CBS767]
Length = 749
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 111/201 (55%), Gaps = 25/201 (12%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLI 121
N+DE++ F +++++ EG+++K + S +EP RS WLKLK +Y+ G LD+++
Sbjct: 546 NLDELQHFLDQSVKDSCEGLMVKMMNGTDSYYEPSKRSRNWLKLKKDYLAGVGDSLDLVV 605
Query: 122 IGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYF 181
IG Y G G+R G FL+A + + + + + C++GTG SDE+L ++ +LKP
Sbjct: 606 IGAYIGKGKRTGSYGGFLLASYNQDSGE-----YETTCKIGTGFSDEDLVSIHARLKP-- 658
Query: 182 RKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPY----- 236
+ + PK P + T NS PDVW E +I +T+D+ S ++ A +
Sbjct: 659 TEIQRPK---PYYVYDTTNSNAVPDVWFEP--TTIFEVLTADLSL--SPIYKAAHQQYGK 711
Query: 237 --SLRFPRIDRVRYDKPWHDC 255
SLRFPR R+R DK D
Sbjct: 712 GISLRFPRFLRIRDDKGTEDA 732
>gi|380025428|ref|XP_003696476.1| PREDICTED: DNA ligase 4-like [Apis florea]
Length = 899
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 110/211 (52%), Gaps = 16/211 (7%)
Query: 59 CWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGK-WLKLKPEYIR-AGSD 116
C S+ +E+ F E+I+N++EGIV+K SK++ + G K+K EY D
Sbjct: 398 CKSIKVSKSEELCNIFNESIKNKEEGIVVKKCDSKYKLNIKDGTGCYKIKAEYSEDLIQD 457
Query: 117 LDVLIIGGYYGSGRRGGEVAQFLVALAERP-APDTYPRRFISFCRVGTGLSDEELDAVVT 175
+D++I+GGYYG G+ G + FL+ +A P P F+S V GLS +EL +
Sbjct: 458 IDLIILGGYYGDGKFIGSIKSFLMGVASSSKTPGENPIEFLSIVSVSNGLSMDELKELWR 517
Query: 176 KLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP 235
+ ++ PP + P++WI PE SIIL++ + T RS +
Sbjct: 518 IFENKWQTQRPTNVIPPKI--------DLPELWI-CPENSIILTVKASEMT-RSSDYPTG 567
Query: 236 YSLRFPRIDRVRYDKPWHDCL---DVQSFVE 263
YSLRFP + +R DKPW++ D+QS ++
Sbjct: 568 YSLRFPEVTNIRTDKPWYNVCTTNDLQSLIK 598
>gi|50289929|ref|XP_447396.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526706|emb|CAG60333.1| unnamed protein product [Candida glabrata]
Length = 724
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 108/215 (50%), Gaps = 20/215 (9%)
Query: 62 LVAHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDL 117
+ N+DE++KF E+++N EG+++K + S +EP RS WLKLK +Y+ G L
Sbjct: 519 MTTSNLDELQKFLDESVKNSCEGLMVKMMDGVESYYEPSKRSRNWLKLKKDYLEGVGDSL 578
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D+ ++G Y+G G+R G FL+ + D F + C++GTG S+E L + KL
Sbjct: 579 DLCVLGAYFGRGKRTGTYGGFLLGCYNADSED-----FETCCKIGTGFSEEMLQTLYEKL 633
Query: 178 KPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSI---TSDIRTIRSEVFSA 234
P P Y V ++S E PDVW E +L+ S I S V+
Sbjct: 634 SPTVID------GPKGTY-VFDSSAE-PDVWFEPTMLFEVLTADLSLSPIYKAGSSVYDK 685
Query: 235 PYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSN 269
SLRFPR R+R DK D + +E+ + +
Sbjct: 686 GISLRFPRFLRIRDDKSVEDATSSEQIIEMYQNQS 720
>gi|365766695|gb|EHN08190.1| Cdc9p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 732
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 102/210 (48%), Gaps = 20/210 (9%)
Query: 62 LVAHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDL 117
+ +N+DE++KF E++ + EG+++K L S +EP RS WLKLK +Y+ G L
Sbjct: 527 ITTNNLDELQKFLDESVNHSCEGLMVKMLEGPESHYEPSKRSRNWLKLKKDYLEGVGDSL 586
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D+ ++G YYG G+R G FL+ + + F + C++GTG SDE L + +L
Sbjct: 587 DLCVLGAYYGRGKRTGTYGGFLLGCYNQDTGE-----FETCCKIGTGFSDEMLQLLHDRL 641
Query: 178 KPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSI---TSDIRTIRSEVFSA 234
P + PK +S PDVW E +L+ S I S F
Sbjct: 642 TPTI--IDGPKAT------FVFDSSAEPDVWFEPTTLFEVLTADLSLSPIYKAGSATFDK 693
Query: 235 PYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
SLRFPR R+R DK D VEL
Sbjct: 694 GVSLRFPRFLRIREDKGVEDATSSDQIVEL 723
>gi|392300662|gb|EIW11753.1| Cdc9p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 732
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 102/210 (48%), Gaps = 20/210 (9%)
Query: 62 LVAHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDL 117
+ +N+DE++KF E++ + EG+++K L S +EP RS WLKLK +Y+ G L
Sbjct: 527 ITTNNLDELQKFLDESVNHSCEGLMVKMLEGPESHYEPSKRSRNWLKLKKDYLEGVGDSL 586
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D+ ++G YYG G+R G FL+ + + F + C++GTG SDE L + +L
Sbjct: 587 DLCVLGAYYGRGKRTGTYGGFLLGCYNQDTGE-----FETCCKIGTGFSDEMLQLLHDRL 641
Query: 178 KPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSI---TSDIRTIRSEVFSA 234
P + PK +S PDVW E +L+ S I S F
Sbjct: 642 TPTI--IDGPKAT------FVFDSSAEPDVWFEPTTLFEVLTADLSLSPIYKAGSATFDK 693
Query: 235 PYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
SLRFPR R+R DK D VEL
Sbjct: 694 GVSLRFPRFLRIREDKGVEDATSSDQIVEL 723
>gi|207347088|gb|EDZ73389.1| YDL164Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 755
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 102/210 (48%), Gaps = 20/210 (9%)
Query: 62 LVAHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDL 117
+ +N+DE++KF E++ + EG+++K L S +EP RS WLKLK +Y+ G L
Sbjct: 550 ITTNNLDELQKFLDESVNHSCEGLMVKMLEGPESHYEPSKRSRNWLKLKKDYLEGVGDSL 609
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D+ ++G YYG G+R G FL+ + + F + C++GTG SDE L + +L
Sbjct: 610 DLCVLGAYYGRGKRTGTYGGFLLGCYNQDTGE-----FETCCKIGTGFSDEMLQLLHDRL 664
Query: 178 KPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSI---TSDIRTIRSEVFSA 234
P + PK +S PDVW E +L+ S I S F
Sbjct: 665 TPTI--IDGPKAT------FVFDSSAEPDVWFEPTTLFEVLTADLSLSPIYKAGSATFDK 716
Query: 235 PYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
SLRFPR R+R DK D VEL
Sbjct: 717 GVSLRFPRFLRIREDKGVEDATSSDQIVEL 746
>gi|6320038|ref|NP_010117.1| DNA ligase (ATP) CDC9 [Saccharomyces cerevisiae S288c]
gi|2506361|sp|P04819.2|DNLI1_YEAST RecName: Full=DNA ligase 1; AltName: Full=DNA ligase I; AltName:
Full=Polydeoxyribonucleotide synthase [ATP] 1; Flags:
Precursor
gi|1061275|emb|CAA91582.1| DNA ligase [Saccharomyces cerevisiae]
gi|1431259|emb|CAA98737.1| CDC9 [Saccharomyces cerevisiae]
gi|51830214|gb|AAU09681.1| YDL164C [Saccharomyces cerevisiae]
gi|151941840|gb|EDN60196.1| DNA ligase [Saccharomyces cerevisiae YJM789]
gi|256273587|gb|EEU08520.1| Cdc9p [Saccharomyces cerevisiae JAY291]
gi|259145080|emb|CAY78344.1| Cdc9p [Saccharomyces cerevisiae EC1118]
gi|285810873|tpg|DAA11697.1| TPA: DNA ligase (ATP) CDC9 [Saccharomyces cerevisiae S288c]
gi|349576917|dbj|GAA22086.1| K7_Cdc9p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 755
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 102/210 (48%), Gaps = 20/210 (9%)
Query: 62 LVAHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDL 117
+ +N+DE++KF E++ + EG+++K L S +EP RS WLKLK +Y+ G L
Sbjct: 550 ITTNNLDELQKFLDESVNHSCEGLMVKMLEGPESHYEPSKRSRNWLKLKKDYLEGVGDSL 609
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D+ ++G YYG G+R G FL+ + + F + C++GTG SDE L + +L
Sbjct: 610 DLCVLGAYYGRGKRTGTYGGFLLGCYNQDTGE-----FETCCKIGTGFSDEMLQLLHDRL 664
Query: 178 KPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSI---TSDIRTIRSEVFSA 234
P + PK +S PDVW E +L+ S I S F
Sbjct: 665 TPTI--IDGPKAT------FVFDSSAEPDVWFEPTTLFEVLTADLSLSPIYKAGSATFDK 716
Query: 235 PYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
SLRFPR R+R DK D VEL
Sbjct: 717 GVSLRFPRFLRIREDKGVEDATSSDQIVEL 746
>gi|3515|emb|CAA27005.1| unnamed protein product [Saccharomyces cerevisiae]
Length = 755
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 102/210 (48%), Gaps = 20/210 (9%)
Query: 62 LVAHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDL 117
+ +N+DE++KF E++ + EG+++K L S +EP RS WLKLK +Y+ G L
Sbjct: 550 ITTNNLDELQKFLDESVNHSCEGLMVKMLEGPESHYEPSKRSRNWLKLKKDYLEGVGDSL 609
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D+ ++G YYG G+R G FL+ + + F + C++GTG SDE L + +L
Sbjct: 610 DLCVLGAYYGRGKRTGTYGGFLLGCYNQDTGE-----FETCCKIGTGFSDEMLQLLHDRL 664
Query: 178 KPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSI---TSDIRTIRSEVFSA 234
P + PK +S PDVW E +L+ S I S F
Sbjct: 665 TPTI--IDGPKAT------FVFDSSAEPDVWFEPTTLFEVLTADLSLSPIYKAGSATFDK 716
Query: 235 PYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
SLRFPR R+R DK D VEL
Sbjct: 717 GVSLRFPRFLRIREDKGVEDATSSDQIVEL 746
>gi|323355897|gb|EGA87709.1| Cdc9p [Saccharomyces cerevisiae VL3]
Length = 690
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 102/210 (48%), Gaps = 20/210 (9%)
Query: 62 LVAHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDL 117
+ +N+DE++KF E++ + EG+++K L S +EP RS WLKLK +Y+ G L
Sbjct: 485 ITTNNLDELQKFLDESVNHSCEGLMVKMLEGPESHYEPSKRSRNWLKLKKDYLEGVGDSL 544
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D+ ++G YYG G+R G FL+ + + F + C++GTG SDE L + +L
Sbjct: 545 DLCVLGAYYGRGKRTGTYGGFLLGCYNQDTGE-----FETCCKIGTGFSDEMLQLLHDRL 599
Query: 178 KPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSI---TSDIRTIRSEVFSA 234
P + PK +S PDVW E +L+ S I S F
Sbjct: 600 TPTI--IDGPKAT------FVFDSSAEPDVWFEPTTLFEVLTADLSLSPIYKAGSATFDK 651
Query: 235 PYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
SLRFPR R+R DK D VEL
Sbjct: 652 GVSLRFPRFLRIREDKGVEDATSSDQIVEL 681
>gi|380492300|emb|CCF34704.1| DNA ligase I [Colletotrichum higginsianum]
Length = 998
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 136/542 (25%), Positives = 241/542 (44%), Gaps = 54/542 (9%)
Query: 63 VAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLI 121
VA + D +E ++ + EG+VLK+ S + R+ WLK+KPEY+ G LD ++
Sbjct: 477 VATSPDAIEPLLRKVVAEASEGLVLKNPRSMYRLNSRNDDWLKVKPEYMSEFGESLDCVV 536
Query: 122 IGGYYGSGRRGGEVAQFLVAL---AERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLK 178
+GGYYGSGRRGG ++ F+ L P + SF +VG G E+ + +
Sbjct: 537 VGGYYGSGRRGGALSSFMCGLRVSENHIQAGANPEKCFSFFKVGGGFRAEDYAEIRHRTD 596
Query: 179 PYFRKYEYPKRAPPSFYQVTNNSK--ERPDVWIESPEKSIILSITSDIRTIRSEVFSAPY 236
+ +++ P++ P F ++ + ERPDVWI P S++L + S+ FS +
Sbjct: 597 GKWMQWD-PRKPPVEFVELAGGDRQFERPDVWIR-PRDSVVLEAKA-ASIGSSDQFSLGF 653
Query: 237 SLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGE 296
+LRFPR R+R DK W + L VQ F++L ++ KE +++ R S K
Sbjct: 654 TLRFPRFRRLRSDKNWDEGLSVQEFLDL---RKRVEEEAKEKTMSVENRK---RKSVKRA 707
Query: 297 KKNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFVN---VPPAYSLDSLHKMVVENGGTFS 353
K+ V I + + K + +F + F ++ P + L ++ ENGG S
Sbjct: 708 KREVVIAGTENMPAQFEGQK--SKLFDGLEFCVLSESLRPFKKTKAQLETLIKENGGRVS 765
Query: 354 MNLNNSVTHCVAADNKGLKYEAAKRRG------DVIHYSWVLDCCSQKK---LLQLQPKY 404
+ AD +K + + G D+I W+ DC Q LL + ++
Sbjct: 766 QRAIPRSEMILVADKNVIKVASLVKEGQKEGGVDIIKPKWIQDCLEQADESFLLPYEDRH 825
Query: 405 YLHLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNVDRSEDPKTIDYYKKKY----- 459
H +++ K + D + D Y ++ L +++ + ++ + E P T + K ++
Sbjct: 826 LQHATEALKTVALQNTDMYGDSYARNIGLDELRAIFKSMPKRE-PDTEPFDKSQFLNQLE 884
Query: 460 -----CPQDKWSCFHGCCIYFYHSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNL-- 512
Q K F C ++ + + E D + + + ++F G ++ +
Sbjct: 885 ERGHGIGQLKGLIFRRCTVHLHEANEEGERD-----DINMLKYMNYLTFGGARLASGADD 939
Query: 513 ANATHVVVLSVL-GYDVNFNSLTESFTAREKHLLWNKKLHVVRSQWLEDCLAKEQKSEEY 571
ATH+V++ G L ++R K H+V W+EDC ++ +E
Sbjct: 940 EGATHIVLIGTGDGCKEAAEDLRRETSSR------RKIPHIVTRHWVEDCWREKTLLDEE 993
Query: 572 EY 573
Y
Sbjct: 994 RY 995
>gi|170071033|ref|XP_001869792.1| DNA ligase 4 [Culex quinquefasciatus]
gi|167866990|gb|EDS30373.1| DNA ligase 4 [Culex quinquefasciatus]
Length = 805
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 95/358 (26%), Positives = 156/358 (43%), Gaps = 34/358 (9%)
Query: 88 KDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERP 146
++ G + P +R+ W K+KP+YI SD D+LI+GG+Y + R V +LV + ++
Sbjct: 313 QEAGLDYSPNERNAGWYKIKPDYIDNLVSDFDLLIMGGFYNAKR--SFVNTYLVGVLDKS 370
Query: 147 APDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRA-------PPSFYQVTN 199
DT F++ +VG GLS ++ + T L+P++R+ + + PP
Sbjct: 371 TEDT----FLAVTKVGIGLSVDQWRTLNTSLRPHWREVTFRREGRSKISEEPPGLRW--- 423
Query: 200 NSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQ 259
+ PDVWI P SI+L + +RS F+ Y++RFPRI +R DK + D +
Sbjct: 424 -GQTAPDVWI-PPNHSIVLQLKGS-ELVRSASFATSYTIRFPRITAIRSDKDFKDVCTGE 480
Query: 260 SFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSH------FLQTDVS 313
F L ++ + K + D P +SRK +K +S + S Q +
Sbjct: 481 EFARLCSANTTVAKLAKRHVTAADLLPPSGSTSRK--RKQISPLKSRQRSAPPLPQPEED 538
Query: 314 DIKGETSIFSDMVFYFVNVPP-AYSLDSLHKMVVENGGTFSMNLNNSVTHCVAADNKGLK 372
I S + F ++ A S+ L + +GG N +A + L
Sbjct: 539 APPPLDDICSGLDFCVLSTAKGAPSIRELETTIRRHGGRTVKNPGPKTYAVIAGERTFLV 598
Query: 373 YEAAK-RRGDVIHYSWVLDCCS----QKKLLQLQPKYYLHLSDSSKKKLQEEVDEFSD 425
+ RR +V WVL + L P L +D +++L E D F D
Sbjct: 599 SRIIETRRHNVATVEWVLRTLGGPQPRTNLPDFTPNDLLAATDELREQLAERFDRFGD 656
>gi|401626455|gb|EJS44401.1| cdc9p [Saccharomyces arboricola H-6]
Length = 757
Score = 107 bits (266), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 103/210 (49%), Gaps = 20/210 (9%)
Query: 62 LVAHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDL 117
++ +N+DE++KF +++ + EG+++K L S +EP RS WLKLK +Y+ G L
Sbjct: 552 IITNNLDELQKFLDDSVNHSCEGLMVKMLEGPESHYEPSKRSRNWLKLKKDYLDGVGDSL 611
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D+ ++G YYG G+R G FL+ + + F + C++GTG SDE L + +L
Sbjct: 612 DLCVLGAYYGRGKRTGTYGGFLLGCYNQDTGE-----FETCCKIGTGFSDEMLQQLHERL 666
Query: 178 KPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSI---TSDIRTIRSEVFSA 234
P + PK +S PDVW E +L+ S I S F
Sbjct: 667 TPTI--IDGPKAT------FVFDSSAEPDVWFEPTTLFEVLTADLSLSPIYKAGSATFDK 718
Query: 235 PYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
SLRFPR R+R DK D VEL
Sbjct: 719 GVSLRFPRFLRIREDKGVEDATSSDQIVEL 748
>gi|340713799|ref|XP_003395423.1| PREDICTED: DNA ligase 4-like [Bombus terrestris]
Length = 897
Score = 106 bits (265), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 134/532 (25%), Positives = 233/532 (43%), Gaps = 67/532 (12%)
Query: 59 CWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGK-WLKLKPEYIRAGS-- 115
C S +++ + F E+I N++EGIV+K SK++P R+G K+K EY +G
Sbjct: 395 CKSTRVSKSEKLCEIFNESIRNKEEGIVVKKCDSKYKPNVRNGTDCYKIKAEY--SGDLV 452
Query: 116 -DLDVLIIGGYYGSGRRGGEVAQFLVALAERP-APDTYPRRFISFCRVGTGLSDEELDAV 173
D+D++I+GGYY + G V FL+ +A P P +F+S V +GLS L +
Sbjct: 453 HDIDLIILGGYYNK-KFMGLVNSFLMGVASSTKTPGENPTKFLSVVSVSSGLSMNTLKEL 511
Query: 174 VTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFS 233
K ++ E P+ P K P+VWI PE SIIL+I + I S +
Sbjct: 512 GKMFKDKWQT-ERPENVIPP--------KVEPNVWIR-PEDSIILTIKAS-EMICSNNYP 560
Query: 234 APYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSS---NGTTQKGKEYGGLQDDKPKQFR 290
YSLRFPR+ VR DKPW+D + L+ + T++ Y +++ + +
Sbjct: 561 TGYSLRFPRVTSVREDKPWYDVCTTDNLKLLIKDTQPIQKLTKREISYEDIEEAHESKVQ 620
Query: 291 SSRKGEKKNVSIVPSHFLQTDVSDIKGE--TSIFSDMVFYFVNVPPAYSLDSLHKMVVEN 348
K +K+ + ++ ++ D T +F D +N + + +++V++
Sbjct: 621 EESKTKKQRLIKYEEKSMKPNIYDNPPVYLTRLFDDKEICVINGVDELPKEQIEEILVQH 680
Query: 349 GGTFSMNLNNSVTHCVAADNKGLKYEAA--KRRGDVIHYSWVLDCCSQKKLLQLQ---PK 403
N + + K ++ ++ DV+ W ++ LQ P
Sbjct: 681 RANVVQNPLKENYCTIVGNVKTVRASCIIQSKKYDVVTLDWFRRVTKKENWSSLQDFLPW 740
Query: 404 YYLHLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNVDRSEDPKTIDYYKKKYCPQD 463
+ +S+K++L + D++ D Y D D + + V+ +E DY + K Q+
Sbjct: 741 DLICSRESTKQRLAQYYDDYYDHYTIDADEESLLRSFKKVEDTEQNVKFDYTEMKKIDQE 800
Query: 464 -------KWSCFHGCCIYFYHSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNLANAT 516
+S F G YFY ++ LS K E F GG + + +
Sbjct: 801 LFDSEVSPYSLFRGIVGYFYDPSD-LS--------------KFEFRFMGGTIRETIDD-- 843
Query: 517 HVVVLSVLGYDVNFNSLTESFTARE-KHLLWNK---KLHVVRSQWLEDCLAK 564
SV +N NS T E ++L+ NK L +++S+W+ +C +
Sbjct: 844 -----SVTNIFINNNS-----TGTELQNLIENKSQASLTIIKSEWIGECFKQ 885
>gi|254584268|ref|XP_002497702.1| ZYRO0F11572p [Zygosaccharomyces rouxii]
gi|238940595|emb|CAR28769.1| ZYRO0F11572p [Zygosaccharomyces rouxii]
Length = 731
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 109/210 (51%), Gaps = 20/210 (9%)
Query: 62 LVAHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDL 117
L+ N++E++ F +++++ EG+++K L S +EP RS WLKLK +Y+ G L
Sbjct: 527 LITANIEELQHFLDQSVKDSCEGLMVKMLDGPESHYEPSKRSRNWLKLKKDYLNGVGDSL 586
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D+ ++G YYG G+R G FL+ + DT + + C++GTG S+E L + +L
Sbjct: 587 DLCVLGAYYGRGKRTGTYGGFLLGCYNQ---DT--GEYETCCKIGTGFSEELLQQLYDRL 641
Query: 178 KPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSI---TSDIRTIRSEVFSA 234
KP AP +FY +S ++PDVW E +L+ S + S +
Sbjct: 642 KP------TAMEAPAAFY--VYDSAQQPDVWFEPTLLFEVLAADLSLSPVYKAGSAQYDK 693
Query: 235 PYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
SLRFPR R+R DK + + V+L
Sbjct: 694 GISLRFPRFLRIRDDKSVEEATSSEQVVDL 723
>gi|444320241|ref|XP_004180777.1| hypothetical protein TBLA_0E02050 [Tetrapisispora blattae CBS 6284]
gi|387513820|emb|CCH61258.1| hypothetical protein TBLA_0E02050 [Tetrapisispora blattae CBS 6284]
Length = 720
Score = 106 bits (264), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 108/210 (51%), Gaps = 20/210 (9%)
Query: 62 LVAHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDL 117
L N+DE++ F + I++ EG+++K L S +EP RS WLKLK +Y++ G L
Sbjct: 515 LTTSNLDELQTFLDKAIKDSCEGLMVKSLDGTDSHYEPSKRSRNWLKLKKDYLQGMGDSL 574
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D+ ++G YYG G+R G FL+A + DT F + C++GTG SDE L + L
Sbjct: 575 DLCVLGAYYGRGKRTGTYGGFLLACYNQ---DT--EEFETCCKIGTGFSDEMLQTLYNGL 629
Query: 178 KPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSI---TSDIRTIRSEVFSA 234
K E +P + + V ++S E PDVW +L+ S I S V+
Sbjct: 630 K------ETAIESPRANF-VFDSSAE-PDVWFNPTMVFEVLTADLSLSPIYKAGSTVYGK 681
Query: 235 PYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
SLRFPR R+R DK +D + ++
Sbjct: 682 GISLRFPRFIRIRTDKSVNDATSSEQVIDF 711
>gi|241952605|ref|XP_002419024.1| DNA ligase I, mitochondrial precursor, putative;
polydeoxyribonucleotide synthase [ATP] [Candida
dubliniensis CD36]
gi|223642364|emb|CAX42606.1| DNA ligase I, mitochondrial precursor, putative [Candida
dubliniensis CD36]
Length = 848
Score = 105 bits (263), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 72/200 (36%), Positives = 103/200 (51%), Gaps = 21/200 (10%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDV 119
+ N++ +++F ++I++ EG+++K L S +EP RS WLKLK +Y+ G LD+
Sbjct: 642 SSNLEVLQQFLDQSIKDSCEGLMVKMLNGSDSFYEPSKRSRNWLKLKKDYLEGVGDSLDL 701
Query: 120 LIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 179
++IG Y G G+R G FL+A + D + C++GTG SDE+L + KL P
Sbjct: 702 VVIGAYNGKGKRTGTYGGFLLASYNEDSGD-----LETCCKIGTGFSDEDLLNLYNKLHP 756
Query: 180 YFRKYEYPKRAPPSFYQV--TNNSKERPDVWIESPEKSIILSI---TSDIRTIRSEVFSA 234
+ A P Y V TNNS PDVW E +L+ S I + F
Sbjct: 757 -------TEIASPKNYFVYDTNNSNAVPDVWFEPSMLFEVLTADLSLSPIYKTGHQEFGK 809
Query: 235 PYSLRFPRIDRVRYDKPWHD 254
SLRFPR RVR DK D
Sbjct: 810 GVSLRFPRFIRVRDDKGVED 829
>gi|256074244|ref|XP_002573436.1| DNA ligase I [Schistosoma mansoni]
gi|350645178|emb|CCD60120.1| DNA ligase I, putative [Schistosoma mansoni]
Length = 783
Score = 105 bits (263), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 78/236 (33%), Positives = 118/236 (50%), Gaps = 26/236 (11%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYIRA-GSDL 117
SL + + DE+ F E I+ EG+++K L S +E RS WLKLK +Y+ G L
Sbjct: 560 SLDSSDTDEIATFLDEAIKGNCEGLMIKTLDRNSTYEIAKRSHSWLKLKKDYLEGVGDTL 619
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D+++IGG+YG+G+R G +L+A + PDT + + C++GTG+ D+EL
Sbjct: 620 DLVVIGGFYGTGKRAGRYGGYLLACYD---PDT--EEYQTICKIGTGMKDDEL----ASF 670
Query: 178 KPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRSEVFS 233
+F+ + K P +YQ T + PD W E + K+ LSI+ + + +
Sbjct: 671 SEFFKNHATDKAKP--YYQYTISLI--PDQWFEPVQVWEVKAADLSISPGHKA--AAGLA 724
Query: 234 AP---YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGT-TQKGKEYGGLQDDK 285
P SLRFPR R+R DK D Q EL + Q G + G DD+
Sbjct: 725 DPQKGISLRFPRFVRIRDDKKPEDATTAQQVYELYQNQEQIKNQHGNKQTGNNDDE 780
>gi|256074242|ref|XP_002573435.1| DNA ligase I [Schistosoma mansoni]
Length = 752
Score = 105 bits (263), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 78/236 (33%), Positives = 118/236 (50%), Gaps = 26/236 (11%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYIRA-GSDL 117
SL + + DE+ F E I+ EG+++K L S +E RS WLKLK +Y+ G L
Sbjct: 529 SLDSSDTDEIATFLDEAIKGNCEGLMIKTLDRNSTYEIAKRSHSWLKLKKDYLEGVGDTL 588
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D+++IGG+YG+G+R G +L+A + PDT + + C++GTG+ D+EL
Sbjct: 589 DLVVIGGFYGTGKRAGRYGGYLLACYD---PDT--EEYQTICKIGTGMKDDEL----ASF 639
Query: 178 KPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRSEVFS 233
+F+ + K P +YQ T + PD W E + K+ LSI+ + + +
Sbjct: 640 SEFFKNHATDKAKP--YYQYTISLI--PDQWFEPVQVWEVKAADLSISPGHKA--AAGLA 693
Query: 234 AP---YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGT-TQKGKEYGGLQDDK 285
P SLRFPR R+R DK D Q EL + Q G + G DD+
Sbjct: 694 DPQKGISLRFPRFVRIRDDKKPEDATTAQQVYELYQNQEQIKNQHGNKQTGNNDDE 749
>gi|350645177|emb|CCD60119.1| DNA ligase I, putative [Schistosoma mansoni]
Length = 749
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/236 (33%), Positives = 118/236 (50%), Gaps = 26/236 (11%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYIRA-GSDL 117
SL + + DE+ F E I+ EG+++K L S +E RS WLKLK +Y+ G L
Sbjct: 526 SLDSSDTDEIATFLDEAIKGNCEGLMIKTLDRNSTYEIAKRSHSWLKLKKDYLEGVGDTL 585
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D+++IGG+YG+G+R G +L+A + PDT + + C++GTG+ D+EL
Sbjct: 586 DLVVIGGFYGTGKRAGRYGGYLLACYD---PDT--EEYQTICKIGTGMKDDEL----ASF 636
Query: 178 KPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRSEVFS 233
+F+ + K P +YQ T + PD W E + K+ LSI+ + + +
Sbjct: 637 SEFFKNHATDKAKP--YYQYTISLI--PDQWFEPVQVWEVKAADLSISPGHKA--AAGLA 690
Query: 234 AP---YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGT-TQKGKEYGGLQDDK 285
P SLRFPR R+R DK D Q EL + Q G + G DD+
Sbjct: 691 DPQKGISLRFPRFVRIRDDKKPEDATTAQQVYELYQNQEQIKNQHGNKQTGNNDDE 746
>gi|255726816|ref|XP_002548334.1| DNA ligase I, mitochondrial precursor [Candida tropicalis MYA-3404]
gi|240134258|gb|EER33813.1| DNA ligase I, mitochondrial precursor [Candida tropicalis MYA-3404]
Length = 766
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 104/199 (52%), Gaps = 17/199 (8%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDV 119
+ N++ ++ F ++I++ EG+++K L S +EP RS WLKLK +Y+ G LD+
Sbjct: 561 SSNLEVLQTFLDQSIKDSCEGLMVKMLNGPDSFYEPSKRSRNWLKLKKDYLAGVGDSLDL 620
Query: 120 LIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 179
++IG Y G G+R G FL+A + D + C++GTG SDE+L ++ KL P
Sbjct: 621 VVIGAYSGKGKRTGTYGGFLLASYNQDTGD-----LETCCKIGTGFSDEDLASLYKKLHP 675
Query: 180 YFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSI---TSDIRTIRSEVFSAPY 236
+ + PK+ F TNNS PDVW E +L+ S I + F
Sbjct: 676 --TEIKTPKKY---FVYETNNSNAVPDVWFEPSLLFEVLTADLSLSPIYKTGHQEFGKGI 730
Query: 237 SLRFPRIDRVRYDKPWHDC 255
SLRFPR R+R DK D
Sbjct: 731 SLRFPRFIRLREDKNIEDA 749
>gi|426196726|gb|EKV46654.1| hypothetical protein AGABI2DRAFT_206080 [Agaricus bisporus var.
bisporus H97]
Length = 1915
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/366 (25%), Positives = 173/366 (47%), Gaps = 42/366 (11%)
Query: 69 EVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIGGYYG 127
++ + +E + R EG+++K SK+ R W+K+KPEY+ G +D+L++ G YG
Sbjct: 424 DIRERMEEVMAARGEGLIIKHPLSKYTLNGRIMDWIKVKPEYMDNMGETVDLLVVAGKYG 483
Query: 128 SGRRGGEVAQFLVAL--AERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYE 185
+G+R G V+ + A+ R D ++ +F R+G+GLS D V + KP+
Sbjct: 484 TGKRAGGVSTLICAVFEDRRIDEDDDEPKYSTFVRIGSGLS--YADYVWIRAKPW---KV 538
Query: 186 YPKRAPPSFYQVTNNSKE-RPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRID 244
+ ++ PSF +S E + D+++E PE S I+ I + + S+ + +++RFPR
Sbjct: 539 WNEQQNPSFLLTEKHSHEDKGDLFLE-PEDSFIVKIKA-AEIVPSDQYYMGFTMRFPRAM 596
Query: 245 RVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKG--------E 296
+R D DC+ + +E G++ ++ ++ S G +
Sbjct: 597 SIRDDLTIADCMTASAVLE----------------GMKTERKRKMESDIAGLHPKRSAKK 640
Query: 297 KKNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDS----LHKMVVENGGTF 352
+K +I+P + ++ ++ E++IF M F ++ P + S D L K++ NGG
Sbjct: 641 RKKATIIP-QYQGPNLKNVSIESNIFDGMKFVVMSDPKSRSGDQVRRDLMKLIHANGGMC 699
Query: 353 S--MNLNNSVTHCVAADNKGLKYEAAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSD 410
+ + V + LK K DVI SW+ D + ++ KY+ H +
Sbjct: 700 AQIVKPETFVVYGGTVMPYDLKLVVQKNINDVIKPSWIKDSITLGEIAPFHHKYFFHATP 759
Query: 411 SSKKKL 416
K ++
Sbjct: 760 GRKHEI 765
>gi|14423679|sp|Q9P9K9.1|DNLI_SULSH RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|7341364|gb|AAF61267.1|AF242877_1 DNA ligase [Sulfolobus shibatae]
Length = 601
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 111/209 (53%), Gaps = 23/209 (11%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRAGSD-LDVL 120
+NV++++ FF I EG+++K +G + ++ G R W+KLK +Y +D +D++
Sbjct: 390 VNNVEDLKSFFYRAISEGGEGVMVKAIGKDAIYQAGARGWLWIKLKRDYQSEMADTVDLV 449
Query: 121 IIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPY 180
++GG+YG G+RGG+++ L+A A P DT F S C+V +G SDE+LD + KL
Sbjct: 450 VVGGFYGKGKRGGKISSLLMA-AYNPKTDT----FESVCKVASGFSDEQLDELQKKLMEI 504
Query: 181 FRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILS---ITSDIRTIRSEVFS--AP 235
R ++P+ NSK PD+WIE + I+ S + T +V A
Sbjct: 505 KRDIKHPR----------VNSKMEPDIWIEPVYVAEIIGAEITISPLHTCCQDVVEKDAG 554
Query: 236 YSLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
S+RFPR R R DK D +E+
Sbjct: 555 LSIRFPRFIRWRDDKSPEDATTTDEILEM 583
>gi|63054532|ref|NP_593318.2| ATP-dependent DNA ligase Cdc17 [Schizosaccharomyces pombe 972h-]
gi|118774|sp|P12000.1|DNLI1_SCHPO RecName: Full=DNA ligase 1; AltName: Full=DNA ligase I; AltName:
Full=Polydeoxyribonucleotide synthase [ATP] 1
gi|4925|emb|CAA28754.1| DNA ligase [Schizosaccharomyces pombe]
gi|159883924|emb|CAB08176.2| ATP-dependent DNA ligase Cdc17 [Schizosaccharomyces pombe]
Length = 768
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 113/225 (50%), Gaps = 28/225 (12%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDL---GSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLI 121
+++ +E+F +E++++ EG+++K L S +EP RS WLK+K +Y+ G LD+++
Sbjct: 551 SIESIEEFLEESVKDSCEGLMVKMLEGPDSHYEPSKRSRHWLKVKKDYLSGVGDSLDLIV 610
Query: 122 IGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYF 181
IG YYG G+R FL+ + PDT + S C++GTG S+E L+ +LK
Sbjct: 611 IGAYYGKGKRTSVYGAFLLGCYD---PDTETVQ--SICKLGTGFSEEHLETFYNQLK--- 662
Query: 182 RKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPY----- 236
+ FY ++ +PDVW E K + + +D+ S V+ A
Sbjct: 663 ---DIVISKKKDFYAHSDVPAHQPDVWFEP--KYLWEVLAADLSL--SPVYKAAIGYVQE 715
Query: 237 ----SLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKE 277
SLRFPR R+R DK W D + E S +QK KE
Sbjct: 716 DKGISLRFPRFIRIREDKSWEDATTSEQVSEFYRSQVAYSQKEKE 760
>gi|45185695|ref|NP_983411.1| ACR008Wp [Ashbya gossypii ATCC 10895]
gi|74694987|sp|Q75CA4.1|DNLI4_ASHGO RecName: Full=DNA ligase 4; AltName: Full=DNA ligase IV; AltName:
Full=Polydeoxyribonucleotide synthase [ATP] 4
gi|44981450|gb|AAS51235.1| ACR008Wp [Ashbya gossypii ATCC 10895]
Length = 981
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 127/547 (23%), Positives = 235/547 (42%), Gaps = 94/547 (17%)
Query: 77 TIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIGGYYGSGRRGGEV 135
+ + EGIVLK SK+ G R W+K+KPEY+ G ++D+++IG R G
Sbjct: 478 AVAHGSEGIVLKKARSKYSVGKRDDSWIKIKPEYLENFGENMDLVVIG------RDKGRK 531
Query: 136 AQFLVALA-----ERPAPD----------------TYPR--RFISFCRVGTGLSDEELDA 172
F+ ALA E+ P P+ +FISFC + G+S+EE
Sbjct: 532 DSFICALAVTDDSEKNNPSSYESGSDSDSDSEPIIVQPKIEKFISFCSIANGISNEEFKE 591
Query: 173 VVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITS---DIRTIRS 229
+ + + + Y +R PP+ + + P WI+ P+ S++L + + D +S
Sbjct: 592 IDRLTRGNW--FPYDERKPPTDW--VEFGTKTPREWID-PKNSVVLEVKARSIDNEESKS 646
Query: 230 EVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGL-QDDKPKQ 288
+++ +L R+R+DK W V + T ++ + Y + Q+ K +
Sbjct: 647 DLYKTGSTLYNAYCKRIRHDKNWSTASTVAEY--------DTAREARSYFNVSQNAKFGK 698
Query: 289 FRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFV-----NVPPAYSLDS--L 341
RSS + + + L D+ K + F +++V ++ ++D+ +
Sbjct: 699 DRSSPRKRR-------TFHLVGDIDVTKPSKADFLKGYYFYVTSGYFDLQSKKNIDASEI 751
Query: 342 HKMVVENGGTFSMNLN-----NSVTHCVAADNKGLKYEAAKRRGDVIHYSWVLDCCSQKK 396
+ VV GGT+ NL + + D + LK +R D+IH W++DC
Sbjct: 752 GEAVVSCGGTYIHNLRIRASLDKLYILGCKDTRELKM-LIERGYDIIHPEWLMDCVKYGT 810
Query: 397 LLQLQPKYYLHLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNVDRSEDPKTIDYYK 456
+LQ++PKY S+ K+ + + D++ + Y + +K L + + E+ +
Sbjct: 811 MLQIEPKYVYSASEELMKQARNQEDKYGESYQLPVTEDTLKALANK--QVEEGYASEMGT 868
Query: 457 KKYCPQDKWSCFHGCCIYF-----YHSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNN 511
++ F G Y YHS+ W + +K I GG+V N+
Sbjct: 869 DAVSEYERLLIFKGWLFYILDDYAYHSS------WSDI-------VKWNIESCGGEVTND 915
Query: 512 LANATHVVVLSVLGYDVNFNSLTESFTAREKHLLWNKKLH----VVRSQWLEDCLAKEQK 567
L AT VV + ++ ++ + AR + + + +V S+W+E C+ +
Sbjct: 916 LELATIVVAVKDCFSQLSLQAVRNNIGAR---ITGSNDVQPIPKIVTSEWVEACMEAQYL 972
Query: 568 SEEYEYS 574
+E EY+
Sbjct: 973 VDEDEYA 979
>gi|367001580|ref|XP_003685525.1| hypothetical protein TPHA_0D04570 [Tetrapisispora phaffii CBS 4417]
gi|357523823|emb|CCE63091.1| hypothetical protein TPHA_0D04570 [Tetrapisispora phaffii CBS 4417]
Length = 736
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 112/220 (50%), Gaps = 28/220 (12%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSD 116
SL+ ++DE++ F + ++N EG+++K L S +EP RS WLKLK +Y+ G
Sbjct: 530 SLITSDMDELQTFLDQAVKNSCEGLMVKMLDGEESHYEPSKRSRNWLKLKKDYLDGVGDS 589
Query: 117 LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTK 176
LD++++G Y+G G+R G FL+ DT + F + C++GTG SDE L + T
Sbjct: 590 LDLVVMGAYFGKGKRTGSYGGFLLGCYNE---DT--QEFETCCKIGTGFSDEMLGNLHTL 644
Query: 177 LKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA-- 234
L+P PP Y +S PDVW ++ K + +T+D+ S V+ A
Sbjct: 645 LQP------TEIDNPPMTY--IYDSSAEPDVWFQA--KVLFEVLTADLSL--SPVYKAGN 692
Query: 235 -----PYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSN 269
SLRFPR R+R DK D + +E S +
Sbjct: 693 SRYDKGISLRFPRFLRIREDKDVTDGTTSEDIIEFYESQS 732
>gi|374106617|gb|AEY95526.1| FACR008Wp [Ashbya gossypii FDAG1]
Length = 981
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 127/547 (23%), Positives = 235/547 (42%), Gaps = 94/547 (17%)
Query: 77 TIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIGGYYGSGRRGGEV 135
+ + EGIVLK SK+ G R W+K+KPEY+ G ++D+++IG R G
Sbjct: 478 AVAHGSEGIVLKKARSKYSVGKRDDSWIKIKPEYLENFGENMDLVVIG------RDKGRK 531
Query: 136 AQFLVALA-----ERPAPD----------------TYPR--RFISFCRVGTGLSDEELDA 172
F+ ALA E+ P P+ +FISFC + G+S+EE
Sbjct: 532 DSFICALAVTDDSEKINPSSYESGSDSDSDSEPIIVQPKIEKFISFCSIANGISNEEFKE 591
Query: 173 VVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITS---DIRTIRS 229
+ + + + Y +R PP+ + + P WI+ P+ S++L + + D +S
Sbjct: 592 IDRLTRGNW--FPYDERKPPTDW--VEFGTKTPREWID-PKNSVVLEVKARSIDNEESKS 646
Query: 230 EVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGL-QDDKPKQ 288
+++ +L R+R+DK W V + T ++ + Y + Q+ K +
Sbjct: 647 DLYKTGSTLYNAYCKRIRHDKNWSTASTVAEY--------DTAREARSYFNVSQNAKFGK 698
Query: 289 FRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFV-----NVPPAYSLDS--L 341
RSS + + + L D+ K + F +++V ++ ++D+ +
Sbjct: 699 DRSSPRKRR-------TFHLVGDIDVTKPSKADFLKGYYFYVTSGYFDLQSKKNIDASEI 751
Query: 342 HKMVVENGGTFSMNLN-----NSVTHCVAADNKGLKYEAAKRRGDVIHYSWVLDCCSQKK 396
+ VV GGT+ NL + + D + LK +R D+IH W++DC
Sbjct: 752 GEAVVSCGGTYIHNLRIRASLDKLYILGCKDTRELKM-LIERGYDIIHPEWLMDCVKYGT 810
Query: 397 LLQLQPKYYLHLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNVDRSEDPKTIDYYK 456
+LQ++PKY S+ K+ + + D++ + Y + +K L + + E+ +
Sbjct: 811 MLQIEPKYVYSASEELMKQARNQEDKYGESYQLPVTEDTLKALANK--QVEEGYASEMGT 868
Query: 457 KKYCPQDKWSCFHGCCIYF-----YHSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNN 511
++ F G Y YHS+ W + +K I GG+V N+
Sbjct: 869 DAVSEYERLLIFKGWLFYILDDYAYHSS------WSDI-------VKWNIESCGGEVTND 915
Query: 512 LANATHVVVLSVLGYDVNFNSLTESFTAREKHLLWNKKLH----VVRSQWLEDCLAKEQK 567
L AT VV + ++ ++ + AR + + + +V S+W+E C+ +
Sbjct: 916 LELATIVVAVKDCFSQLSLQAVRNNIGAR---ITGSNDVQPIPKIVTSEWVEACMEAQYL 972
Query: 568 SEEYEYS 574
+E EY+
Sbjct: 973 VDEDEYA 979
>gi|238880520|gb|EEQ44158.1| DNA ligase I, mitochondrial precursor [Candida albicans WO-1]
Length = 772
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/201 (35%), Positives = 103/201 (51%), Gaps = 21/201 (10%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDV 119
+ N++ +++F ++I++ EG+++K L S +EP RS WLKLK +Y+ G LD+
Sbjct: 566 SSNLEVLQQFLDQSIKDSCEGLMVKMLNGSESFYEPSKRSRNWLKLKKDYLEGVGDSLDL 625
Query: 120 LIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 179
++IG Y G G+R G FL+A + D + C++GTG SDE+L + KL P
Sbjct: 626 VVIGAYNGKGKRTGTYGGFLLASYNEDSGD-----LETCCKIGTGFSDEDLLNLYNKLHP 680
Query: 180 YFRKYEYPKRAPPSFYQV--TNNSKERPDVWIESPEKSIILSI---TSDIRTIRSEVFSA 234
+ A P Y V TNNS PDVW E +L+ S I + F
Sbjct: 681 -------TEIASPKNYFVYDTNNSNAVPDVWFEPSMLFEVLTADLSLSPIYKTGHQEFGK 733
Query: 235 PYSLRFPRIDRVRYDKPWHDC 255
SLRFPR RVR DK D
Sbjct: 734 GVSLRFPRFIRVRDDKGIEDA 754
>gi|68491090|ref|XP_710637.1| hypothetical protein CaO19.6155 [Candida albicans SC5314]
gi|46431866|gb|EAK91388.1| hypothetical protein CaO19.6155 [Candida albicans SC5314]
Length = 770
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/201 (35%), Positives = 103/201 (51%), Gaps = 21/201 (10%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDV 119
+ N++ +++F ++I++ EG+++K L S +EP RS WLKLK +Y+ G LD+
Sbjct: 564 SSNLEVLQQFLDQSIKDSCEGLMVKMLNGSESFYEPSKRSRNWLKLKKDYLEGVGDSLDL 623
Query: 120 LIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 179
++IG Y G G+R G FL+A + D + C++GTG SDE+L + KL P
Sbjct: 624 VVIGAYNGKGKRTGTYGGFLLASYNEDSGD-----LETCCKIGTGFSDEDLLNLYNKLHP 678
Query: 180 YFRKYEYPKRAPPSFYQV--TNNSKERPDVWIESPEKSIILSI---TSDIRTIRSEVFSA 234
+ A P Y V TNNS PDVW E +L+ S I + F
Sbjct: 679 -------TEIASPKNYFVYDTNNSNAVPDVWFEPSMLFEVLTADLSLSPIYKTGHQEFGK 731
Query: 235 PYSLRFPRIDRVRYDKPWHDC 255
SLRFPR RVR DK D
Sbjct: 732 GVSLRFPRFIRVRDDKGIEDA 752
>gi|15897140|ref|NP_341745.1| ATP-dependent DNA ligase [Sulfolobus solfataricus P2]
gi|284174384|ref|ZP_06388353.1| ATP-dependent DNA ligase [Sulfolobus solfataricus 98/2]
gi|384433651|ref|YP_005643009.1| ATP-dependent DNA ligase I [Sulfolobus solfataricus 98/2]
gi|20137903|sp|Q980T8.1|DNLI_SULSO RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|13813323|gb|AAK40535.1| DNA ligase (polydeoxyribonucleotide synthase (ATP)) (lig)
[Sulfolobus solfataricus P2]
gi|261601805|gb|ACX91408.1| DNA ligase I, ATP-dependent Dnl1 [Sulfolobus solfataricus 98/2]
Length = 601
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 112/209 (53%), Gaps = 23/209 (11%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRAGSD-LDVL 120
A+NV++++ FF I EG+++K +G + ++ G R W+KLK +Y +D +D++
Sbjct: 390 ANNVEDLKSFFYRAISEGGEGVMVKAIGKDAIYQAGARGWLWIKLKRDYQSEMADTVDLV 449
Query: 121 IIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPY 180
++GG+YG G+RGG+++ L+A A P D+ F S C+V +G SDE+LD + KL
Sbjct: 450 VVGGFYGKGKRGGKISSLLMA-AYNPKTDS----FESVCKVASGFSDEQLDELQKKLMEI 504
Query: 181 FRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILS---ITSDIRTIRSEVFS--AP 235
R ++P+ NSK PD+W+E + I+ S + T +V A
Sbjct: 505 KRDVKHPR----------VNSKMEPDIWVEPVYVAEIIGSEITISPLHTCCQDVVEKDAG 554
Query: 236 YSLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
S+RFPR R R DK D +E+
Sbjct: 555 LSIRFPRFIRWRDDKSPEDATTTDEILEM 583
>gi|119389897|pdb|2HIV|A Chain A, Atp-Dependent Dna Ligase From S. Solfataricus
gi|119389898|pdb|2HIX|A Chain A, Atp Dependent Dna Ligase From S. Solfataricus Bound To Atp
Length = 621
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 112/209 (53%), Gaps = 23/209 (11%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRAGSD-LDVL 120
A+NV++++ FF I EG+++K +G + ++ G R W+KLK +Y +D +D++
Sbjct: 410 ANNVEDLKSFFYRAISEGGEGVMVKAIGKDAIYQAGARGWLWIKLKRDYQSEMADTVDLV 469
Query: 121 IIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPY 180
++GG+YG G+RGG+++ L+A A P D+ F S C+V +G SDE+LD + KL
Sbjct: 470 VVGGFYGKGKRGGKISSLLMA-AYNPKTDS----FESVCKVASGFSDEQLDELQKKLMEI 524
Query: 181 FRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILS---ITSDIRTIRSEVFS--AP 235
R ++P+ NSK PD+W+E + I+ S + T +V A
Sbjct: 525 KRDVKHPR----------VNSKMEPDIWVEPVYVAEIIGSEITISPLHTCCQDVVEKDAG 574
Query: 236 YSLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
S+RFPR R R DK D +E+
Sbjct: 575 LSIRFPRFIRWRDDKSPEDATTTDEILEM 603
>gi|58260492|ref|XP_567656.1| DNA ligase (ATP) [Cryptococcus neoformans var. neoformans JEC21]
gi|338817995|sp|P0CN09.1|DNLI4_CRYNB RecName: Full=DNA ligase 4; AltName: Full=DNA ligase IV; AltName:
Full=Polydeoxyribonucleotide synthase [ATP] 4
gi|338817996|sp|P0CN08.1|DNLI4_CRYNJ RecName: Full=DNA ligase 4; AltName: Full=DNA ligase IV; AltName:
Full=Polydeoxyribonucleotide synthase [ATP] 4
gi|57229737|gb|AAW46139.1| DNA ligase (ATP), putative [Cryptococcus neoformans var. neoformans
JEC21]
Length = 1065
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 97/378 (25%), Positives = 170/378 (44%), Gaps = 59/378 (15%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIGG 124
N ++ ++ + +E + EG+V+K ++ R W+K+KPEY + G +L+VL++GG
Sbjct: 435 NAKDIREYLERVVETKGEGLVVKKTDVIYQTNSRGYDWIKVKPEYSDQMGENLEVLVLGG 494
Query: 125 YYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVV---------- 174
++G G R G++++ L L E+ D + F+ F R L +D V
Sbjct: 495 WWGKGGRSGKISRLLCGLREQAFDDGTLQDFL-FNRFWNELLGLRVDFVSHLMHLRSMRC 553
Query: 175 ---------TKLKPYFRKYEYPKRAPPSFYQVTN-NSKERPDVWIESPEKSIILSITSDI 224
K K ++R ++ + PP F ++ ++PDV+IE PE S ++ + +
Sbjct: 554 SPTHLSQCRNKHKKHWRPFD--RSNPPPFMKLGPVGLDDKPDVYIE-PENSFVIEVKA-- 608
Query: 225 RTIRSEVFSAPY----SLRFPRIDRVRYDKPWHD-CLDVQSFVELVHSSNGTTQKGKEYG 279
SE+ A Y +LRFPR + YDK D LD + + T+K +
Sbjct: 609 ----SEIVPAGYGIGFTLRFPRCKYIYYDKNSRDYALDDECLWTVGQGFFYKTRKLIKRT 664
Query: 280 GLQD--DKPKQFRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYS 337
D +PK+ +G P +F +SD ETSIFSDM F
Sbjct: 665 DFMDLFSRPKRSYDDSQG--------PGNFRGQKLSDADVETSIFSDMTF---------- 706
Query: 338 LDSLHKMVVENGGTFSM-NLNNSVTHCVAADNKGLKYEAAKRRG-DVIHYSWVLDCCSQK 395
L +V ++G F+ L++ ++ D K A R G +VI WV + +++
Sbjct: 707 -SDLEALVHKHGADFTQAQLSDLSAIVISPDQKNPLVRAQIRHGVNVIKPEWVFESIARR 765
Query: 396 KLLQLQPKYYLHLSDSSK 413
L ++ + S+ ++
Sbjct: 766 TALPFLKEFLVFASEEAQ 783
>gi|227828207|ref|YP_002829987.1| ATP-dependent DNA ligase [Sulfolobus islandicus M.14.25]
gi|227830966|ref|YP_002832746.1| ATP-dependent DNA ligase [Sulfolobus islandicus L.S.2.15]
gi|229585436|ref|YP_002843938.1| ATP-dependent DNA ligase [Sulfolobus islandicus M.16.27]
gi|238620398|ref|YP_002915224.1| ATP-dependent DNA ligase [Sulfolobus islandicus M.16.4]
gi|259645311|sp|C3MZR1.1|DNLI_SULIA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|259645312|sp|C4KIZ2.1|DNLI_SULIK RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|259645313|sp|C3MJ14.1|DNLI_SULIL RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|259645314|sp|C3MYD2.1|DNLI_SULIM RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|227457414|gb|ACP36101.1| DNA ligase I, ATP-dependent Dnl1 [Sulfolobus islandicus L.S.2.15]
gi|227460003|gb|ACP38689.1| DNA ligase I, ATP-dependent Dnl1 [Sulfolobus islandicus M.14.25]
gi|228020486|gb|ACP55893.1| DNA ligase I, ATP-dependent Dnl1 [Sulfolobus islandicus M.16.27]
gi|238381468|gb|ACR42556.1| DNA ligase I, ATP-dependent Dnl1 [Sulfolobus islandicus M.16.4]
Length = 601
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 111/209 (53%), Gaps = 23/209 (11%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRAGSD-LDVL 120
+NV++++ FF I EG+++K +G + ++ G R W+KLK +Y +D +D++
Sbjct: 390 VNNVEDLKSFFYRAISEGGEGVMVKAIGKDAIYQAGARGWLWIKLKRDYQSEMADTVDLV 449
Query: 121 IIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPY 180
++GG+YG G+RGG+++ L+A A P DT F S C+V +G SDE+LD + KL
Sbjct: 450 VVGGFYGKGKRGGKISSLLMA-AYNPKTDT----FESVCKVASGFSDEQLDELQKKLMEI 504
Query: 181 FRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILS---ITSDIRTIRSEVFS--AP 235
R ++P+ NSK PD+W+E + I+ S + T +V A
Sbjct: 505 KRDIKHPR----------VNSKMEPDIWVEPVYVAEIIGAEITISPLHTCCQDVVEKDAG 554
Query: 236 YSLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
S+RFPR R R DK D +E+
Sbjct: 555 LSIRFPRFIRWRDDKSPEDATTTDEILEM 583
>gi|255712847|ref|XP_002552706.1| KLTH0C11286p [Lachancea thermotolerans]
gi|238934085|emb|CAR22268.1| KLTH0C11286p [Lachancea thermotolerans CBS 6340]
Length = 951
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 129/544 (23%), Positives = 224/544 (41%), Gaps = 63/544 (11%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIR-AGSDLDVLII 122
A + ++ F + IE EG+++K S +E G R+ W+K+KPEY G +D+++I
Sbjct: 436 ACDAKAIKNFMQRAIEMGSEGVIVKQASSTYEVGARNDHWVKIKPEYFEDLGETMDLVVI 495
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYP----------RRFISFCRVGTGLSDEELDA 172
G G++ + LV+ +E + P + +SFC V G+SDEE
Sbjct: 496 G--RDPGKKDSLMCGLLVSDSEHILENFGPIEHGKEGDPIIKCVSFCNVANGVSDEEFKE 553
Query: 173 VVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVF 232
+ K + + Y K PP + SK P WI+ P+ S+++ + + R++ + +
Sbjct: 554 INRKTRGSWVSY---KEKPPPLSLLEFGSK-IPVEWID-PKNSVVIEVKA--RSVENSEY 606
Query: 233 S-----APYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPK 287
S A +L R+R DK W C V + + + N K K + P+
Sbjct: 607 SSKRYRAGSTLHSAYCRRIRNDKDWTTCTSVAQYQQAKAAHNYHRYKRK----VHQVSPR 662
Query: 288 QFRSSRKGEKKNVSIVPSHFLQTDVSDIKGE-TSIFSDMVFYFVNVPPA-----YSLDSL 341
+ K+NV + + S++ E +SIF + FY ++ Y +
Sbjct: 663 R--------KRNVHEIFEYCAGEAKSELDTEGSSIFEGLHFYILSDYVTSQRRRYERGMV 714
Query: 342 HKMVVENGGTFSMNLNNSVTHC----VAADNKGLKYEAAKRRG-DVIHYSWVLDCCSQKK 396
VV++GG N++ H + + ++ RG D+I W+ DC S
Sbjct: 715 AAKVVKHGGLIVKNIDMRPEHLSYLRIVSGKTTIECRNLVNRGYDIIDPCWIFDCISAGF 774
Query: 397 LLQLQPKYYLHLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNVDRSEDPKTIDYYK 456
L ++PK+ S ++ VD++ D + LD + +QL S +
Sbjct: 775 QLGIEPKHCFQTSRRLLDNSRQRVDQYGDSFSRPLDTTEFQQLFKFFCSSPSDFSSRISS 834
Query: 457 KKYCPQDKWSCFHGCCIYFYHSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNLANAT 516
D+ F Y L P ++ R K+E+ +GG V L A
Sbjct: 835 MLQDDLDEAPLFLLQRFKIYVLAADLIPQ-----QFSILRRKIEL--YGGVVSETLEGAN 887
Query: 517 HVVVLSVL-----GYDVNFNSLTESFTAREKHLLWNKKL-HVVRSQWLEDCLAKEQKSEE 570
V+V S L Y V L + N ++ H+VRS+WL+ C ++ E
Sbjct: 888 LVLVPSALSTARTAYYV--QELRQKIAGNAFAGNTNTRIPHIVRSEWLDTCTTEQCLVPE 945
Query: 571 YEYS 574
++S
Sbjct: 946 EDFS 949
>gi|229581496|ref|YP_002839895.1| ATP-dependent DNA ligase [Sulfolobus islandicus Y.N.15.51]
gi|259645315|sp|C3NF77.1|DNLI_SULIN RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|228012212|gb|ACP47973.1| DNA ligase I, ATP-dependent Dnl1 [Sulfolobus islandicus Y.N.15.51]
Length = 601
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 111/209 (53%), Gaps = 23/209 (11%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRAGSD-LDVL 120
+NV++++ FF I EG+++K +G + ++ G R W+KLK +Y +D +D++
Sbjct: 390 VNNVEDLKSFFYRAISEGGEGVMVKAIGKDAIYQAGARGWLWIKLKRDYQSEMADTVDLV 449
Query: 121 IIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPY 180
++GG+YG G+RGG+++ L+A A P DT F S C+V +G SDE+LD + KL
Sbjct: 450 VVGGFYGKGKRGGKISSLLMA-AYNPKTDT----FESVCKVASGFSDEQLDELQKKLMEI 504
Query: 181 FRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILS---ITSDIRTIRSEVFS--AP 235
R ++P+ NSK PD+W+E + I+ S + T +V A
Sbjct: 505 KRDIKHPR----------VNSKMEPDIWVEPVYVAEIIGAEITISPLHTCCQDVVEKDAG 554
Query: 236 YSLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
S+RFPR R R DK D +E+
Sbjct: 555 LSIRFPRFIRWRDDKSPEDATTTDEILEM 583
>gi|365981523|ref|XP_003667595.1| hypothetical protein NDAI_0A01940 [Naumovozyma dairenensis CBS 421]
gi|343766361|emb|CCD22352.1| hypothetical protein NDAI_0A01940 [Naumovozyma dairenensis CBS 421]
Length = 765
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 101/210 (48%), Gaps = 20/210 (9%)
Query: 62 LVAHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDL 117
L N+DE++KF +++ + EG+++K L S +EP RS WLKLK +Y+ G L
Sbjct: 560 LTTSNLDELQKFLDQSVNDSCEGLMVKMLEGEESHYEPSKRSRNWLKLKKDYLEGIGDSL 619
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D+ ++G YYG G+R G FL+ + F + C++GTG SDE L + KL
Sbjct: 620 DLCVLGAYYGRGKRTGTYGGFLLGCYNDNTGE-----FETCCKIGTGFSDEMLQQLHEKL 674
Query: 178 KPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSI---TSDIRTIRSEVFSA 234
K P + Y +S PDVW E +L+ S I S +
Sbjct: 675 KATVID------GPKATY--IYDSSAEPDVWFEPSLLFEVLTADLSLSPIYKAGSSAYDK 726
Query: 235 PYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
SLRFPR R+R DK D + +EL
Sbjct: 727 GVSLRFPRFIRIREDKGVEDATSSEQIIEL 756
>gi|72390601|ref|XP_845595.1| DNA ligase I [Trypanosoma brucei brucei strain 927/4 GUTat10.1]
gi|62358780|gb|AAX79233.1| DNA ligase I, putative [Trypanosoma brucei]
gi|70802130|gb|AAZ12036.1| DNA ligase I, putative [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
Length = 699
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 115/222 (51%), Gaps = 24/222 (10%)
Query: 62 LVAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRAGSD-LD 118
L +++VD+++ F I + EG+++K L S + P RS WLKLK +Y+ +D LD
Sbjct: 489 LDSNDVDDIQAFLDRAIRDGTEGLMVKTLEEESTYVPAKRSHYWLKLKKDYMDGVTDTLD 548
Query: 119 VLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLK 178
++ IG YYG G+R G FL+A D + S C++GTG D++L+A+ L+
Sbjct: 549 LVPIGAYYGKGKRTGVFGGFLLACY-----DGEGDEYQSICKIGTGFQDDQLEAITKSLQ 603
Query: 179 PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRSEV-FS 233
P + P +Y+ ++++PDVW ++ + K+ LSI+ V S
Sbjct: 604 PSILDEQ------PRYYR----TEDKPDVWFQASQVWEVKAADLSISPAHFAAYGLVDAS 653
Query: 234 APYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKG 275
+LRFPR RVR DK H+ E+ H+ + Q+G
Sbjct: 654 KGIALRFPRFIRVREDKKVHEATSAAQVAEMYHNQS-LAQRG 694
>gi|229579844|ref|YP_002838243.1| ATP-dependent DNA ligase [Sulfolobus islandicus Y.G.57.14]
gi|259645316|sp|C3N834.1|DNLI_SULIY RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|228010559|gb|ACP46321.1| DNA ligase I, ATP-dependent Dnl1 [Sulfolobus islandicus Y.G.57.14]
Length = 601
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 111/209 (53%), Gaps = 23/209 (11%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRAGSD-LDVL 120
+N+++++ FF I EG+++K +G + ++ G R W+KLK +Y +D +D++
Sbjct: 390 VNNIEDLKSFFYRAISEGGEGVMVKAIGKDAIYQAGARGWLWIKLKRDYQSEMADTVDLV 449
Query: 121 IIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPY 180
++GG+YG G+RGG+++ L+A A P DT F S C+V +G SDE+LD + KL
Sbjct: 450 VVGGFYGKGKRGGKISSLLMA-AYNPKTDT----FESVCKVASGFSDEQLDELQKKLMEI 504
Query: 181 FRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILS---ITSDIRTIRSEVFS--AP 235
R ++P+ NSK PD+W+E + I+ S + T +V A
Sbjct: 505 KRDIKHPR----------VNSKMEPDIWVEPVYVAEIIGAEITISPLHTCCQDVVEKDAG 554
Query: 236 YSLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
S+RFPR R R DK D +E+
Sbjct: 555 LSIRFPRFIRWRDDKSPEDATTTDEILEM 583
>gi|339246701|ref|XP_003374984.1| DNA ligase 1 [Trichinella spiralis]
gi|316971746|gb|EFV55486.1| DNA ligase 1 [Trichinella spiralis]
Length = 825
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/242 (32%), Positives = 117/242 (48%), Gaps = 39/242 (16%)
Query: 43 SQLRSQIMAADQTGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRS 100
S LRS I D SLV ++ DE+ +F +E ++ EG++LK L + +E RS
Sbjct: 581 SMLRSLIEEMDGHFFFTKSLVTNDSDEIGQFLEEAVKGNCEGLMLKTLDKDATYEIAKRS 640
Query: 101 GKWLKLKPEYI-RAGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFC 159
KWLKLK +Y+ G +D+++IGGY G GRR G +L+A P + Y S C
Sbjct: 641 HKWLKLKKDYLDNTGDTVDLVVIGGYLGVGRRVGVYGGYLLA-CYNPTTEEYQ----SIC 695
Query: 160 RVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIE--------- 210
++GTG DE+L K +F+++ AP S+Y+ + S PD W +
Sbjct: 696 KIGTGFKDEDLQ----KQAEFFKQHIIS--APKSYYRYS--SSIAPDHWFDPVQVWEVKA 747
Query: 211 -----SPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELV 265
SP+ + I D + I SLRFPR RVR DK D + E+
Sbjct: 748 ADLSISPKHFAAIGIVDDEKGI---------SLRFPRFIRVRDDKNPEDATTAEEVAEIY 798
Query: 266 HS 267
++
Sbjct: 799 YN 800
>gi|68070421|ref|XP_677122.1| DNA ligase 1 [Plasmodium berghei strain ANKA]
gi|56497113|emb|CAH97995.1| DNA ligase 1, putative [Plasmodium berghei]
Length = 897
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 111/209 (53%), Gaps = 23/209 (11%)
Query: 65 HNVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLI 121
+N+D+++ F ++ IEN EG+++K L + +EP RS WLK+K +YI SD +D++
Sbjct: 681 NNIDDIDIFLQDAIENNCEGLMVKTLLDNASYEPSRRSLNWLKVKKDYIEGLSDSVDLVP 740
Query: 122 IGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYF 181
I GYYG G+R G F++A A ++ F + C+ GTG SDE L+A+ L
Sbjct: 741 IAGYYGKGKRSGVYGAFVLA-----AYNSETENFQTVCKAGTGFSDEILNALHESLSDKI 795
Query: 182 RKYEYPKRAPPSFYQVTNNSKERPDVWIES----PEKSIILSITSDIRTIRSEVFS--AP 235
P + S+Y+V++ K PDVW ++ K+ LS+ S + T V+S
Sbjct: 796 ----IPNKK--SYYEVSD--KLNPDVWFDAHYVWEIKAADLSL-SPVHTAAIGVYSDDKG 846
Query: 236 YSLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
LRFPR R+R DK Q VE
Sbjct: 847 IGLRFPRFLRLRDDKNPEQATTAQQIVEF 875
>gi|167521445|ref|XP_001745061.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776675|gb|EDQ90294.1| predicted protein [Monosiga brevicollis MX1]
Length = 657
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/218 (33%), Positives = 112/218 (51%), Gaps = 27/218 (12%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYIRA-GSDL 117
SL+ ++VDE+ ++ +I+ EG+++K L + +E RS WLKLK +Y+ G L
Sbjct: 441 SLITNDVDEINEYLDLSIKESCEGLMVKTLEVDATYEIAKRSHSWLKLKKDYLDGVGDTL 500
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D+++IG + G G+R G FL+A DT F S C++GTG SDE+L T L
Sbjct: 501 DLVVIGAWIGKGKRTGTYGAFLLA-----CHDTETEEFQSICKIGTGFSDEDLKGFATSL 555
Query: 178 KPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE-----KSIILSITSDIRTIRSEVF 232
K + PS+Y+ ++ +PDVW +PE K+ LSI+ R + +
Sbjct: 556 KAHVVP------TAPSYYRY--DAGLKPDVWF-APEQVWEVKAADLSISP--RHLAAAGL 604
Query: 233 SAP---YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 267
P SLRFPR R+R DK D + ++ S
Sbjct: 605 VDPNKGISLRFPRFLRIREDKKADDATSAEQVADMYLS 642
>gi|344301030|gb|EGW31342.1| hypothetical protein SPAPADRAFT_56206 [Spathaspora passalidarum
NRRL Y-27907]
Length = 715
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 107/202 (52%), Gaps = 27/202 (13%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLI 121
N+DE++ F +++++ EG+++K L S +EP RS WLKLK +Y+ G LD+++
Sbjct: 512 NLDELQLFLDQSVKDSCEGLMVKMLNGTESFYEPSKRSRNWLKLKKDYLAGVGDSLDLVV 571
Query: 122 IGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYF 181
IG Y G G+R G FL+A + + + + C++GTG SDE+L + KL P
Sbjct: 572 IGAYNGRGKRTGTYGGFLLASYNQDSGE-----LETTCKIGTGFSDEDLTNLYNKLHP-- 624
Query: 182 RKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSI-TSDIRTIRSEVFSAPY---- 236
E P P Y T NS PDVW E S++ + T+D+ S ++ A +
Sbjct: 625 --TEIPNPRPHFVYDST-NSNAAPDVWFEP---SLLFEVLTADLSL--SPIYKAAHTEYG 676
Query: 237 ---SLRFPRIDRVRYDKPWHDC 255
SLRFPR R+R DK D
Sbjct: 677 KGISLRFPRFLRIRDDKGIEDA 698
>gi|83033053|ref|XP_729309.1| DNA ligase 1 [Plasmodium yoelii yoelii 17XNL]
gi|23486709|gb|EAA20874.1| DNA ligase 1 [Plasmodium yoelii yoelii]
Length = 826
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 111/209 (53%), Gaps = 23/209 (11%)
Query: 65 HNVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLI 121
+N+D+++ F ++ IEN EG+++K L + +EP RS WLK+K +YI SD +D++
Sbjct: 610 NNIDDIDIFLQDAIENNCEGLMVKTLLDNASYEPSRRSLNWLKVKKDYIEGLSDSVDLVP 669
Query: 122 IGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYF 181
I GYYG G+R G F++A A ++ F + C+ GTG SDE L+A+ L
Sbjct: 670 IAGYYGKGKRSGVYGAFVLA-----AYNSETENFQTVCKAGTGFSDEILNALHESLSDKI 724
Query: 182 RKYEYPKRAPPSFYQVTNNSKERPDVWIES----PEKSIILSITSDIRTIRSEVFS--AP 235
P + S+Y+V++ K PDVW ++ K+ LS+ S + T V+S
Sbjct: 725 ----IPNKK--SYYEVSD--KLNPDVWFDAHYVWEIKAADLSL-SPVHTAAIGVYSDDKG 775
Query: 236 YSLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
LRFPR R+R DK Q VE
Sbjct: 776 IGLRFPRFLRLRDDKNPEQATTAQQIVEF 804
>gi|261329005|emb|CBH11983.1| DNA ligase I, putative [Trypanosoma brucei gambiense DAL972]
Length = 746
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 115/222 (51%), Gaps = 24/222 (10%)
Query: 62 LVAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRAGSD-LD 118
L +++VD+++ F I + EG+++K L S + P RS WLKLK +Y+ +D LD
Sbjct: 536 LDSNDVDDIQAFLDRAIRDGTEGLMVKTLEEESTYVPAKRSHYWLKLKKDYMDGVTDTLD 595
Query: 119 VLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLK 178
++ IG YYG G+R G FL+A D + S C++GTG D++L+A+ L+
Sbjct: 596 LVPIGAYYGKGKRTGVFGGFLLACY-----DGEGDEYQSICKIGTGFQDDQLEAITKSLQ 650
Query: 179 PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRSEV-FS 233
P + P +Y+ ++++PDVW ++ + K+ LSI+ V S
Sbjct: 651 PSILDEQ------PRYYR----TEDKPDVWFQASQVWEVKAADLSISPAHFAAYGLVDAS 700
Query: 234 APYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKG 275
+LRFPR RVR DK H+ E+ H+ + Q+G
Sbjct: 701 KGIALRFPRFIRVREDKKVHEATSAAQVAEMYHNQS-LAQRG 741
>gi|260947188|ref|XP_002617891.1| hypothetical protein CLUG_01350 [Clavispora lusitaniae ATCC 42720]
gi|238847763|gb|EEQ37227.1| hypothetical protein CLUG_01350 [Clavispora lusitaniae ATCC 42720]
Length = 780
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 105/208 (50%), Gaps = 17/208 (8%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDV 119
+ ++DE++ F +++++ EG+++K L S +EP RS WLKLK +Y+ G LD+
Sbjct: 575 SSDLDELQAFLDQSVKDSCEGLMVKMLHGPESFYEPSKRSRNWLKLKKDYLAGVGDSLDL 634
Query: 120 LIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 179
+++G Y G G+R G FL+A + + + C++GTG SDE+L ++ KLKP
Sbjct: 635 VVVGAYVGKGKRTGSYGGFLLATYNDDTGE-----YETTCKIGTGFSDEDLASLYAKLKP 689
Query: 180 YFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSI---TSDIRTIRSEVFSAPY 236
+ PK P + T NS PDVW+E +L+ S I + +
Sbjct: 690 --TEISRPK---PFYVYDTKNSNAVPDVWLEPTLLFEVLTADLSLSPIYKASHQEYGKGI 744
Query: 237 SLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
SLRFPR R R DK D E
Sbjct: 745 SLRFPRFIRTREDKGVEDATTSSQIAEF 772
>gi|320583128|gb|EFW97344.1| DNA ligase [Ogataea parapolymorpha DL-1]
Length = 706
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 110/217 (50%), Gaps = 28/217 (12%)
Query: 62 LVAHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDL 117
L + ++D + KF +++++ EG+++K L S +EP RS WLKLK +Y+ G L
Sbjct: 496 LDSSDLDVITKFLDQSVKDSCEGLMIKTLNGTNSLYEPSKRSRNWLKLKKDYLEGVGDSL 555
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D+++IG Y G G+R G FL+A PD+ F + C++GTG S+E L ++ KL
Sbjct: 556 DLVVIGAYVGKGKRTGGYGGFLLASYN---PDS--GEFEAICKIGTGFSEEMLASLFEKL 610
Query: 178 KPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPY- 236
KP + + PK SF N + PD+W E ++ +D S ++ Y
Sbjct: 611 KP--TQLDKPK---ASFVYDKTNPRAAPDIWFEP--TTLFEVKVADF--TESPLYKCGYS 661
Query: 237 ---------SLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
SLRFPR R+R DK D + VE+
Sbjct: 662 YLGDGSKGVSLRFPRFVRIRDDKSVEDATTSEQIVEM 698
>gi|298714787|emb|CBJ25686.1| DNA ligase, putative [Ectocarpus siliculosus]
Length = 1071
Score = 103 bits (256), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 104/444 (23%), Positives = 192/444 (43%), Gaps = 71/444 (15%)
Query: 68 DEVEK-------FFKETIENRDEGIVLKDLGSKWEPGDRSGK---WLKLKPEYIRAGSDL 117
DEVE+ F + I +EG+V+KDL + GD+S K W+K+KPEY D+
Sbjct: 459 DEVERKKQLDECFEQRAIHLNEEGLVVKDLHGHYMIGDKSKKIPLWIKMKPEYSDQTEDM 518
Query: 118 DVLIIGGYYGSGR-RGGEVAQFLVALAERPAPDTYPRR-FISFCRVGTGLSDEELDAVVT 175
D+LI+ + +G+ R G +++FLV +A P D PR+ + RVGTG S EL+ +
Sbjct: 519 DLLILAAGFANGKMRSGLLSKFLVGVAV-PNEDRQPRKEYYPLARVGTGYSINELEDLNE 577
Query: 176 KLKPYFRKYEY--PKRAPPSFYQVTNNSKERPDV--WIESPEKSIILSITSDIRTIRSEV 231
LK ++ ++ P P + +S++ + WI + E S+ L + + +++
Sbjct: 578 LLKDKWKSFDTSDPTHFDPHRTGIKKSSRDGVPLTKWIAA-EDSVCLQVKC-MEIVKASD 635
Query: 232 FSAPY-SLRFPRIDRVRYDKPWHDCLDVQSFVEL-----VHSSNGTTQKGKEYGGLQDDK 285
+ + ++RFPR+ +R DK CLD + + ++ G ++ +GG
Sbjct: 636 WPGVFCTMRFPRVTHIRKDKGSEGCLDTTELAAIQARPRLSAAPGGHRQNNTHGGHPGSG 695
Query: 286 PKQ----FRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIF-------------SDMVFY 328
++ ++G V F T ++ + +F F
Sbjct: 696 SRRNGRDGGGKKRGRTGGGRKVSELFASTGGDEVTVKEKVFVAASGRTALELCVVGTSFS 755
Query: 329 FVNVPPAYSLD-------------------------SLHKMVVENGGTFSMNLNNSVTHC 363
V+VP ++D + ++ E+GGT + N + +
Sbjct: 756 GVHVPDVNTIDVDAWWAPAGSTRRKAEGGHEGRTKQDIELLIREHGGTVTANPMPTTSFV 815
Query: 364 VAADNKGLKYE----AAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEE 419
V D + + + K+ +V+ Y WVL+C QK ++ LS +++ +
Sbjct: 816 VVGDTTSVSVKNLIASPKKEYNVVGYRWVLECIHQKAYKFPSMEHVRALSPEAREYFEAV 875
Query: 420 VDEFSDLYFWDLDLADIKQLLSNV 443
D+F D Y D A + +L+ N+
Sbjct: 876 KDDFGDDYTELTDAAQLSKLMLNI 899
>gi|429964388|gb|ELA46386.1| DNA ligase I, ATP-dependent (dnl1) [Vavraia culicis 'floridensis']
Length = 660
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 106/201 (52%), Gaps = 22/201 (10%)
Query: 65 HNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVLIIGG 124
H + +EK F E++ R EG+++K+L S + P RS WLKLK +YI +D++++G
Sbjct: 475 HIEETIEKAFNESLNQRHEGLIIKNLNSLYVPNKRSNDWLKLKKDYISMADTVDLVVMGA 534
Query: 125 YYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKY 184
+YG G+R G FL+ R + C++GTG ++ L ++ KL
Sbjct: 535 FYGKGKRTGVYGGFLMGCYNN-------ERVEAICKLGTGFDEQTLGSLKDKLN------ 581
Query: 185 EYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRID 244
++ P Y+ +++S PD+WI+ PE ++ S S +++ SLRFPR
Sbjct: 582 --VSKSVPKLYKYSDSST--PDLWID-PEYVFEVNAAS---ISNSPLYTTGLSLRFPRFI 633
Query: 245 RVRYDKPWHDCLDVQSFVELV 265
++R DK D + S+++L+
Sbjct: 634 KIREDKRIEDATTL-SYIKLM 653
>gi|385773884|ref|YP_005646451.1| ATP-dependent DNA ligase I [Sulfolobus islandicus HVE10/4]
gi|385776526|ref|YP_005649094.1| ATP-dependent DNA ligase I [Sulfolobus islandicus REY15A]
gi|323475274|gb|ADX85880.1| DNA ligase I, ATP-dependent Dnl1 [Sulfolobus islandicus REY15A]
gi|323477999|gb|ADX83237.1| DNA ligase I, ATP-dependent Dnl1 [Sulfolobus islandicus HVE10/4]
Length = 601
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 110/209 (52%), Gaps = 23/209 (11%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRAGSD-LDVL 120
+NV++++ FF I EG+++K +G + ++ G R W+KLK +Y +D +D++
Sbjct: 390 VNNVEDLKSFFYRAISEGGEGVMVKAIGKDAIYQAGARGWLWIKLKRDYQSEMADTVDLV 449
Query: 121 IIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPY 180
++GG+YG G+RGG+++ L+A A P DT F S C+V +G SDE+LD + KL
Sbjct: 450 VVGGFYGKGKRGGKISSLLMA-AYNPKTDT----FESVCKVASGFSDEQLDELQKKLMEI 504
Query: 181 FRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILS---ITSDIRTIRSEVFS--AP 235
R ++P+ NSK PD+W+E + I+ S + T V A
Sbjct: 505 KRDIKHPR----------VNSKMEPDIWVEPVYVAEIIGAEITISPLHTCCQGVVEKDAG 554
Query: 236 YSLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
S+RFPR R R DK D +E+
Sbjct: 555 LSIRFPRFIRWRDDKSPEDATTTDEILEM 583
>gi|336374245|gb|EGO02582.1| hypothetical protein SERLA73DRAFT_175993 [Serpula lacrymans var.
lacrymans S7.3]
gi|336387155|gb|EGO28300.1| hypothetical protein SERLADRAFT_458691 [Serpula lacrymans var.
lacrymans S7.9]
Length = 727
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 110/230 (47%), Gaps = 36/230 (15%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSK---WEPGDRSGKWLKLKPEYIRA-GSDLDV 119
++ +DE+E F +E+I++ EG+++K L S +EP RS WLKLK +Y+ G LD+
Sbjct: 511 SNTIDEIEAFLEESIKDGCEGLMVKMLASDNSYYEPSRRSVNWLKLKKDYLHGVGDSLDL 570
Query: 120 LIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 179
+++GGYYG G+R FL+A DT F + C++GTG S+E+L LKP
Sbjct: 571 VVVGGYYGKGKRANVYGAFLLACY-----DTNTEEFQTICKIGTGFSEEQLQTHYDMLKP 625
Query: 180 YFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP---- 235
+ +PDVW E K + +T+D+ S +++A
Sbjct: 626 L---------QSLNIRGDIKAGGAQPDVWFEP--KIVWEVLTADLSL--SPIYTAAQGLI 672
Query: 236 ----YSLRFPRIDRVRYDKPWHDCLDVQSFVE------LVHSSNGTTQKG 275
SLRFPR R R DK D + E L+ S T + G
Sbjct: 673 EERGISLRFPRFIRPREDKSAEDSTSPEQIAEMYQRQTLIESKRNTNEIG 722
>gi|254580003|ref|XP_002495987.1| ZYRO0C07854p [Zygosaccharomyces rouxii]
gi|238938878|emb|CAR27054.1| ZYRO0C07854p [Zygosaccharomyces rouxii]
Length = 944
Score = 102 bits (254), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 116/498 (23%), Positives = 211/498 (42%), Gaps = 72/498 (14%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDV 119
S+ ++ ++ ++ I EGI+LK SK+E G R+ W+K+KPEY+ + G +LD+
Sbjct: 422 SMHCYDDTSIKSSLEKAIMMGSEGIILKHFKSKYEIGARTDNWIKIKPEYLEQFGENLDL 481
Query: 120 LIIGGYYGSGRRGGEVAQFLVALA-----ERPA-----------------PDTYPRRFIS 157
L+I GR G+ + LA E P P ++FIS
Sbjct: 482 LVI------GRDPGKKDSLMCGLAVLEGDEEPGAQSDKQVVNLDSEEEEEPRKAVKKFIS 535
Query: 158 FCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSII 217
FC + G+S EE + K ++ E K PP ++ + P+ WI PE S++
Sbjct: 536 FCTIANGISQEEFKQIERKTAGKWKNTEDHK--PP---KILEFGSKLPEEWI-YPEDSVV 589
Query: 218 LSITS---DIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQK 274
L + + D F +L R+R DK W +C + EL
Sbjct: 590 LEVKARSLDNTESSGRKFKVGCTLHGGYCRRIREDKNWTEC---YTLYELWQERRKKVPL 646
Query: 275 GKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTDVSDIKGET-SIFSDMVFYFVNVP 333
++ + K K+ R R + S QT D + +T SIF ++FY ++
Sbjct: 647 SEDSNNQKPMKSKKIRRPR---------IVSRLNQTLSCDDEAKTSSIFDGLIFYVISDY 697
Query: 334 PA------YSLDSLHKMVVENGGTFSMNL--NNSVTHC--VAADNKGLKYEAAKRRG-DV 382
A S + L ++ NGG + N+ ++ V + + L+ +A RG D+
Sbjct: 698 MASQDSERISKEQLCDLISGNGGKLTFNVISDHRVKGGLRIISGKYTLECKALIERGYDI 757
Query: 383 IHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSN 442
+ W++DC + L+ ++P++ +S+ +K + VD F D Y ++ ++ +L++
Sbjct: 758 LSPQWLMDCVNTGFLVTIEPRHCFSVSEDMEKIARTRVDHFGDSYDVEITEDRLRDILTS 817
Query: 443 VDRSEDPKTIDYYKKKYCPQDKWSCFHGCCIYFYHSTEPLSPDWEVLLGLALRRLKLEIS 502
+ D T D S ++ + P+ L L LK ++
Sbjct: 818 KEFDSDFST--------GSLDVISDVEDIPLFLFSRRIVFIPEGFSYLDTQL--LKHKVR 867
Query: 503 FHGGKVCNNLANATHVVV 520
+GG++ +N+ ++V
Sbjct: 868 LYGGQLTDNVNQCNLIIV 885
>gi|290977272|ref|XP_002671362.1| predicted protein [Naegleria gruberi]
gi|284084930|gb|EFC38618.1| predicted protein [Naegleria gruberi]
Length = 846
Score = 102 bits (254), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 112/224 (50%), Gaps = 27/224 (12%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYIRA-GSDLDVL 120
+++++++ F +++I+ EG+++K L + +EP RS WLKLK +YI G +D++
Sbjct: 633 TNDLNDIQVFLEDSIKGNCEGLMVKTLEVDATYEPSKRSFNWLKLKKDYIEGLGDSVDLV 692
Query: 121 IIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPY 180
+IGGY G G+R G FL+A + P D Y S C++GTG SDE L K+
Sbjct: 693 VIGGYKGRGKRTGVYGGFLLACFD-PESDQYQ----SICKIGTGFSDEMLKECADKMN-- 745
Query: 181 FRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA------ 234
E+ AP S++ + +RPDVW ++ +++ I + TI +A
Sbjct: 746 ----EHIISAPKSYFSFRES--QRPDVWFDA---NVVWEIKAADLTISPAHMAAIGLVDE 796
Query: 235 --PYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGK 276
+LRFPR R R DK + +L +S Q K
Sbjct: 797 SKGIALRFPRFVRTREDKKPEQATSAEQIADLYNSQAVIAQNKK 840
>gi|284998454|ref|YP_003420222.1| ATP-dependent DNA ligase I [Sulfolobus islandicus L.D.8.5]
gi|284446350|gb|ADB87852.1| DNA ligase I, ATP-dependent Dnl1 [Sulfolobus islandicus L.D.8.5]
Length = 601
Score = 102 bits (254), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 110/209 (52%), Gaps = 23/209 (11%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRAGSD-LDVL 120
+NV++++ FF I EG+++K +G + ++ G R W+KLK +Y +D +D++
Sbjct: 390 VNNVEDLKSFFYRAISEGGEGVMVKAIGKDAIYQAGARGWLWIKLKRDYQSEMADTVDLV 449
Query: 121 IIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPY 180
++GG+YG G+RGG+++ L+A A P DT F S C+ +G SDE+LD + KL
Sbjct: 450 VVGGFYGKGKRGGKISSLLMA-AYNPKTDT----FESVCKAASGFSDEQLDELQKKLMEI 504
Query: 181 FRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILS---ITSDIRTIRSEVFS--AP 235
R ++P+ NSK PD+W+E + I+ S + T +V A
Sbjct: 505 KRDIKHPR----------VNSKMEPDIWVEPVYVAEIIGAEITISPLHTCCQDVVEKDAG 554
Query: 236 YSLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
S+RFPR R R DK D +E+
Sbjct: 555 LSIRFPRFIRWRDDKSPEDATTTDEILEM 583
>gi|349581170|dbj|GAA26328.1| K7_Dnl4p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 944
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 100/420 (23%), Positives = 176/420 (41%), Gaps = 96/420 (22%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLII 122
+ V+ ++K + I EG+VLK S + R+ W+K+KPEY+ G +LD+++I
Sbjct: 423 CYGVESIKKSLEVAISLGSEGVVLKYYNSSYNVASRNNNWIKVKPEYLEEFGENLDLIVI 482
Query: 123 GGYYGSGRRGGEVAQFLVALA-----------------------ERPAPDTYPR--RFIS 157
G R G+ F++ L E+ ++ R + +S
Sbjct: 483 G------RDSGKKDSFMLGLLVLDEEEYKKHQGDSSEIVDHSSQEKHIQNSRGRVKKILS 536
Query: 158 FCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSII 217
FC + G+S EE + K + ++++ + APP+ + + P WI+ P +SI+
Sbjct: 537 FCSIANGISQEEFKEIDRKTRGHWKRTS--EVAPPA--SILEFGSKIPAEWID-PSESIV 591
Query: 218 LSITS---DIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVE-LVHSSNGTTQ 273
L I S D + ++ +L R+RYDK W DC + E SN + Q
Sbjct: 592 LEIKSRSLDNTETNMQKYATNCTLYGGYCKRIRYDKEWTDCYTLNDLYESRTAKSNPSYQ 651
Query: 274 KGKEYGGLQDDKPKQ------FRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVF 327
+ GL K K+ F +RK Q +S+I F+ ++F
Sbjct: 652 AERSQLGLIRKKRKRVLISDSFHQNRK--------------QLPISNI------FAGLLF 691
Query: 328 YFV------NVPPAYSLDSLHKMVVENGGTFSMNL--------------NNSVTHCVAAD 367
Y + + + L K +VE+GG N+ + T C A
Sbjct: 692 YVLSDYVTEDTGIRITRAELEKTIVEHGGKLIYNVILKRHSIGDVRLISCKTTTECKALI 751
Query: 368 NKGLKYEAAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEVDEFSDLY 427
++G D++H +WVLDC + K+L+ ++P Y ++S + ++ VD D +
Sbjct: 752 DRGY---------DILHPNWVLDCIAYKRLILIEPNYCFNVSQKMRAVAEKRVDCLGDSF 802
>gi|392296338|gb|EIW07440.1| Dnl4p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 944
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 100/420 (23%), Positives = 176/420 (41%), Gaps = 96/420 (22%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLII 122
+ V+ ++K + I EG+VLK S + R+ W+K+KPEY+ G +LD+++I
Sbjct: 423 CYGVESIKKSLEVAISLGSEGVVLKYYNSSYNVASRNNNWIKVKPEYLEEFGENLDLIVI 482
Query: 123 GGYYGSGRRGGEVAQFLVALA-----------------------ERPAPDTYPR--RFIS 157
G R G+ F++ L E+ ++ R + +S
Sbjct: 483 G------RDSGKKDSFMLGLLVLDEEEYKKHQGDSSEIVDHSSQEKHIQNSRRRVKKILS 536
Query: 158 FCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSII 217
FC + G+S EE + K + ++++ + APP+ + + P WI+ P +SI+
Sbjct: 537 FCSIANGISQEEFKEIDRKTRGHWKRTS--EVAPPA--SILEFGSKIPAEWID-PSESIV 591
Query: 218 LSITS---DIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVE-LVHSSNGTTQ 273
L I S D + ++ +L R+RYDK W DC + E SN + Q
Sbjct: 592 LEIKSRSLDNTETNMQKYATNCTLYGGYCKRIRYDKEWTDCYTLNDLYESRTAKSNPSYQ 651
Query: 274 KGKEYGGLQDDKPKQ------FRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVF 327
+ GL K K+ F +RK Q +S+I F+ ++F
Sbjct: 652 AERSQLGLIRKKRKRVLISDSFHQNRK--------------QLPISNI------FAGLLF 691
Query: 328 YFV------NVPPAYSLDSLHKMVVENGGTFSMNL--------------NNSVTHCVAAD 367
Y + + + L K +VE+GG N+ + T C A
Sbjct: 692 YVLSDYVTEDTGIRITRAELEKTIVEHGGKLIYNVILKRHSIGDVRLISCKTTTECKALI 751
Query: 368 NKGLKYEAAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEVDEFSDLY 427
++G D++H +WVLDC + K+L+ ++P Y ++S + ++ VD D +
Sbjct: 752 DRGY---------DILHPNWVLDCIAYKRLILIEPNYCFNVSQKMRAVAEKRVDCLGDSF 802
>gi|365763249|gb|EHN04779.1| Dnl4p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 944
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 100/416 (24%), Positives = 177/416 (42%), Gaps = 88/416 (21%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLII 122
+ V+ ++K + I EG+VLK S + R+ W+K+KPEY+ G +LD+++I
Sbjct: 423 CYGVESIKKSLEVAISLGSEGVVLKYYNSSYNVASRNNNWIKVKPEYLEEFGENLDLIVI 482
Query: 123 GGYYGSGRRGGEVAQFLV-------------------ALAERPAPDTYPR--RFISFCRV 161
G SG++ + LV + E+ ++ R + +SFC +
Sbjct: 483 GR--DSGKKDSFMLGLLVLDEEEYKKHQGDSSEIVDHSSQEKHIQNSRRRVKKILSFCSI 540
Query: 162 GTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSIT 221
G+S EE + K + ++++ + APP+ + + P WI+ P +SI+L I
Sbjct: 541 ANGISQEEFKEIDRKTRGHWKRTS--EVAPPA--SILEFGSKIPAEWID-PSESIVLEIK 595
Query: 222 S---DIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVE-LVHSSNGTTQKGKE 277
S D + ++ +L R+RYDK W DC + E SN + Q +
Sbjct: 596 SRSLDNTETNMQKYATNCTLYGGYCKRIRYDKEWTDCYTLNDLYESRTAKSNPSYQAERS 655
Query: 278 YGGLQDDKPKQ------FRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFV- 330
GL K K+ F +RK Q +S+I F+ ++FY +
Sbjct: 656 QLGLIRKKRKRVLISDSFHQNRK--------------QLPISNI------FAGLLFYVLS 695
Query: 331 -----NVPPAYSLDSLHKMVVENGGTFSMNL--------------NNSVTHCVAADNKGL 371
+ + L K +VE+GG N+ + T C A ++G
Sbjct: 696 DYVTEDTGIRITRAELEKTIVEHGGKLIYNVILKRHSIGDVRLISCKTTTECKALIDRGY 755
Query: 372 KYEAAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEVDEFSDLY 427
D++H +WVLDC + K+L+ ++P Y ++S + ++ VD D +
Sbjct: 756 ---------DILHPNWVLDCIAYKRLILIEPNYCFNVSQKMRAVAEKRVDCLGDSF 802
>gi|302847056|ref|XP_002955063.1| ATP-dependent DNA ligase [Volvox carteri f. nagariensis]
gi|300259591|gb|EFJ43817.1| ATP-dependent DNA ligase [Volvox carteri f. nagariensis]
Length = 648
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 115/224 (51%), Gaps = 19/224 (8%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLII 122
+ +V+E+E F E++E EG+++K L +EP RS WLKLK +Y+ G DV+ +
Sbjct: 436 SRDVEELESFLTESVEAGTEGLIVKTLADTYEPSKRSSHWLKLKKDYMEGVGDTFDVVPL 495
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
G +YG G+R G +L+ + + PDT + IS ++GTG S+E+L + ++P+
Sbjct: 496 GAFYGKGKRTGFFGAYLLGVYD---PDTETYQTIS--KLGTGFSEEQLQQLADSMRPHI- 549
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRSEV-FSAPYS 237
P+ P +Y+ ++ PDVW ++ K+ LSI+ + V S S
Sbjct: 550 ---IPQ--PRPYYKWSDALV--PDVWFDAVAVWEVKAADLSISPVHKAAVGLVDPSKGIS 602
Query: 238 LRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGL 281
+RFPR+ RVR DK D E+ S Q+ YG L
Sbjct: 603 IRFPRLIRVREDKSPEDATSAAQVAEMFRSQAVIKQQQVGYGCL 646
>gi|154283321|ref|XP_001542456.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150410636|gb|EDN06024.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 972
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 127/498 (25%), Positives = 208/498 (41%), Gaps = 93/498 (18%)
Query: 63 VAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIR-AGSDLDVLI 121
+ H+ +++ ++ + EG+VLK+ S + +R W+K+KPEY+ G LD ++
Sbjct: 468 IGHSATDIDPLLRKVVAEASEGLVLKNPNSPYRLNERHDDWMKVKPEYMTDFGESLDCIV 527
Query: 122 IGGYYGSGRRGGEVAQFLVAL---AERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLK 178
IGGYYGSGRRGG ++ FL L +P + SFC+VG G + + +
Sbjct: 528 IGGYYGSGRRGGALSSFLCGLRVDGSHSKTGDHPTKCYSFCKVGGGFTAADYANIRHHTD 587
Query: 179 PYFRKYEYPKRAPPSFYQVTNN--SKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPY 236
+ ++ PKR P + ++ ERPDVWI+ PE S++L + + T ++ F
Sbjct: 588 GKWMDWD-PKRPPTEYIELAGGDLQYERPDVWIK-PEDSVVLCVKASSVT-STDQFRLGL 644
Query: 237 SLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGE 296
++RFPR R+R DK W L +Q F++L S+ K KE+ + D ++ R RK
Sbjct: 645 TVRFPRFKRLRMDKDWRSALSIQEFMDL-KSNVEREVKEKEF---KVDDSRKVR-HRKAI 699
Query: 297 KKNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFVNVP---PAYSLDSLHKMVVENGGTFS 353
KK ++I + + + ++F + F+ + P + L ++V NGG
Sbjct: 700 KKPLTIA-GYDGGKKLEYVGPSGTLFDGLNFFIMTESVHQPKKTKAQLEQLVKANGGKIY 758
Query: 354 MNLNNSVTHCVAADNKGLKYEAAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSK 413
N + AD + E A
Sbjct: 759 QTNNVAENTICIADRTDQEEEIA------------------------------------- 781
Query: 414 KKLQEEVDEFSDLYFWDLDLADIKQLLSNVDRS----------------------EDPKT 451
E VD++SD Y D+D +++K+LL ++ + P T
Sbjct: 782 ----EHVDKYSDSYARDIDASELKKLLDSMHPAPALPPSSLSELESQLESHSLNERKPAT 837
Query: 452 IDYYKKKYCPQDKWSCFHGCCIYFYHSTEPLSPDWEVLLGLALRRLKLE---ISFHGGKV 508
CP W F G IYF + + + +RL L + F GG+V
Sbjct: 838 PTISNTSTCP--GW-LFKGLVIYFAMPPSLSNEGNGKIPHVLPQRLYLASNLVKFAGGEV 894
Query: 509 CNN------LANATHVVV 520
+ A THVVV
Sbjct: 895 ITDDDGDMKDARITHVVV 912
>gi|403216452|emb|CCK70949.1| hypothetical protein KNAG_0F02870 [Kazachstania naganishii CBS
8797]
Length = 954
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 101/408 (24%), Positives = 183/408 (44%), Gaps = 66/408 (16%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLII 122
+N++ + K I EGI+LK L S++ R+ W+K+KP+Y++ G ++D++II
Sbjct: 424 CNNLESITKSLAAAISVGSEGIILKKLNSRYMVASRNDSWIKIKPQYLKQFGENMDLIII 483
Query: 123 GGYYGSGRRGGEVAQFLVALA---ERPAP----------------DTYPR--------RF 155
GR G+ F+ AL + P P D+ P +F
Sbjct: 484 ------GRDPGKKDAFMCALGVTIDDPQPRVLQQEENVNLDLDTEDSEPETPKASRIVKF 537
Query: 156 ISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKS 215
+SFC + G+S+ E + K + +R+++ K PPS Y ++P WI+ P++S
Sbjct: 538 VSFCTIANGISNAEFKEIDQKTRGLWRRFDQVK--PPSEY--LQFGTKKPVEWID-PKES 592
Query: 216 IILSITS-DIRTIRSEV--FSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTT 272
++L + S + S V + A +L VRYDK W C V F
Sbjct: 593 LVLEVKSRSLDNTESNVKKYRAGVTLFGGYCRAVRYDKDWTTCYTVSEF----------- 641
Query: 273 QKGKEYGGLQDDKPKQFRSSRKGEKK-NVSIVPSHFLQTDVSDIKGETS-IFSDMVFY-- 328
++ ++Y + + + +S KG KK N + + +GE S IF ++ F
Sbjct: 642 ERDRQYKLPKVNAGESITTSNKGRKKRNTTSILGVISPRKKRTPEGEHSDIFQNLHFCVL 701
Query: 329 --FVNVPPAYSLD--SLHKMVVENGGTFSMNL----NNSVTHCVAADNKGLKYEAAKRRG 380
+++ +D +L +++++ GG N+ + D ++ A +RG
Sbjct: 702 SDYLDPYTGNRIDRNTLTQLIIDYGGKVIYNVLAKEGEEGMLRIICDGFNMECNALIKRG 761
Query: 381 -DVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEVDEFSDLY 427
D++ SWVLDC +LL+L+ + ++S + VDE+ D +
Sbjct: 762 YDILSPSWVLDCIESARLLKLERNHCFNVSKELMELSSTRVDEYDDSF 809
>gi|151945634|gb|EDN63875.1| ATP-dependent DNA ligase [Saccharomyces cerevisiae YJM789]
gi|207341293|gb|EDZ69390.1| YOR005Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256273994|gb|EEU08910.1| Dnl4p [Saccharomyces cerevisiae JAY291]
gi|259149489|emb|CAY86293.1| Dnl4p [Saccharomyces cerevisiae EC1118]
Length = 944
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 100/420 (23%), Positives = 176/420 (41%), Gaps = 96/420 (22%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLII 122
+ V+ ++K + I EG+VLK S + R+ W+K+KPEY+ G +LD+++I
Sbjct: 423 CYGVESIKKSLEVAISLGSEGVVLKYYNSSYNVASRNNNWIKVKPEYLEEFGENLDLIVI 482
Query: 123 GGYYGSGRRGGEVAQFLVALA-----------------------ERPAPDTYPR--RFIS 157
G R G+ F++ L E+ ++ R + +S
Sbjct: 483 G------RDSGKKDSFMLGLLVLDEEEYKKHQGDSSEIVDHSSQEKHIQNSRRRVKKILS 536
Query: 158 FCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSII 217
FC + G+S EE + K + ++++ + APP+ + + P WI+ P +SI+
Sbjct: 537 FCSIANGISQEEFKEIDRKTRGHWKRTS--EVAPPA--SILEFGSKIPAEWID-PSESIV 591
Query: 218 LSITS---DIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVE-LVHSSNGTTQ 273
L I S D + ++ +L R+RYDK W DC + E SN + Q
Sbjct: 592 LEIKSRSLDNTETNMQKYATNCTLYGGYCKRIRYDKEWTDCYTLNDLYESRTAKSNPSYQ 651
Query: 274 KGKEYGGLQDDKPKQ------FRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVF 327
+ GL K K+ F +RK Q +S+I F+ ++F
Sbjct: 652 AERSQLGLIRKKRKRVLISDSFHQNRK--------------QLPISNI------FAGLLF 691
Query: 328 YFV------NVPPAYSLDSLHKMVVENGGTFSMNL--------------NNSVTHCVAAD 367
Y + + + L K +VE+GG N+ + T C A
Sbjct: 692 YVLSDYVTEDTGIRITRAELEKTIVEHGGKLIYNVILKRHSIGDVRLISCKTTTECKALI 751
Query: 368 NKGLKYEAAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEVDEFSDLY 427
++G D++H +WVLDC + K+L+ ++P Y ++S + ++ VD D +
Sbjct: 752 DRGY---------DILHPNWVLDCIAYKRLILIEPNYCFNVSQKMRAVAEKRVDCLGDSF 802
>gi|50307281|ref|XP_453619.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642753|emb|CAH00715.1| KLLA0D12496p [Kluyveromyces lactis]
Length = 700
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 103/213 (48%), Gaps = 20/213 (9%)
Query: 62 LVAHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDL 117
L N DE++K+ +++++ EG+++K L S +EP RS WLKLK +Y+ G L
Sbjct: 496 LTTTNFDELQKYLDQSVKDSCEGLMVKMLEGEESHYEPSKRSRNWLKLKKDYLEGVGDSL 555
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D++++G YYG G+R G FL+ + + F + C++GTG SDE L + TKL
Sbjct: 556 DLVVLGAYYGRGKRTGTYGGFLLGCYNLDSEE-----FETCCKIGTGFSDEMLQDLYTKL 610
Query: 178 KPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSI---TSDIRTIRSEVFSA 234
K E+P V +S DVW E +L+ S + E F
Sbjct: 611 KD--TTVEHPST------NVIYDSSAPADVWFEPSMLFEVLTADLSLSPVYKAGFEAFGK 662
Query: 235 PYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 267
SLRFPR R+R DK D +E S
Sbjct: 663 GISLRFPRFVRIRDDKNVTDATSSDQVIEFYES 695
>gi|161528545|ref|YP_001582371.1| ATP-dependent DNA ligase I [Nitrosopumilus maritimus SCM1]
gi|224487905|sp|A9A3K1.1|DNLI_NITMS RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|160339846|gb|ABX12933.1| DNA ligase I, ATP-dependent Dnl1 [Nitrosopumilus maritimus SCM1]
Length = 588
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 104/202 (51%), Gaps = 26/202 (12%)
Query: 63 VAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLI 121
+ N +++E FF+ +I EG++LK L S ++ G R WLKLK EY G LD+++
Sbjct: 381 IVKNENDIEDFFENSINAGSEGLMLKTLVSPYQAGSRGSHWLKLKREYQNELGDSLDLVV 440
Query: 122 IGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYF 181
IGG++G GRR G L+A E DT F S C+VGTG SDE+LD + L P
Sbjct: 441 IGGFFGKGRRTGNYGTLLLATYEED-EDT----FTSICKVGTGFSDEDLDQLYQILNPKV 495
Query: 182 RKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDI------RTIRSEVF-SA 234
+ P+ NS+ DVW E PE +I + S+I + R ++ A
Sbjct: 496 TIKKNPRI----------NSEMEADVWFE-PE-LVIEVVASEITLSPIHKAARDKIRKGA 543
Query: 235 PYSLRFPRI-DRVRYDKPWHDC 255
+LRFP+ ++R +K D
Sbjct: 544 GLALRFPKFTGKMRVEKMAEDA 565
>gi|190407346|gb|EDV10613.1| ATP dependent DNA ligase [Saccharomyces cerevisiae RM11-1a]
Length = 944
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 100/420 (23%), Positives = 176/420 (41%), Gaps = 96/420 (22%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLII 122
+ V+ ++K + I EG+VLK S + R+ W+K+KPEY+ G +LD+++I
Sbjct: 423 CYGVESIKKSLEVAISLGSEGVVLKYYNSSYNVASRNNNWIKVKPEYLEEFGENLDLIVI 482
Query: 123 GGYYGSGRRGGEVAQFLVALA-----------------------ERPAPDTYPR--RFIS 157
G R G+ F++ L E+ ++ R + +S
Sbjct: 483 G------RDSGKKDSFMLGLLVLDEEEYKKHQGDSSEIVDHSSQEKHIQNSRRRVKKILS 536
Query: 158 FCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSII 217
FC + G+S EE + K + ++++ + APP+ + + P WI+ P +SI+
Sbjct: 537 FCSIANGISQEEFKEIDRKTRGHWKRTS--EVAPPA--SILEFGSKIPAEWID-PSESIV 591
Query: 218 LSITS---DIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVE-LVHSSNGTTQ 273
L I S D + ++ +L R+RYDK W DC + E SN + Q
Sbjct: 592 LEIKSRSLDNTETNMQKYATNCTLYGGYCKRIRYDKEWTDCYTLNDLYESRTAKSNPSYQ 651
Query: 274 KGKEYGGLQDDKPKQ------FRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVF 327
+ GL K K+ F +RK Q +S+I F+ ++F
Sbjct: 652 AERSQLGLIRKKRKRVLISDSFHQNRK--------------QLPISNI------FAGLLF 691
Query: 328 YFV------NVPPAYSLDSLHKMVVENGGTFSMNL--------------NNSVTHCVAAD 367
Y + + + L K +VE+GG N+ + T C A
Sbjct: 692 YVLSDYVTEDTGIRITRAELEKTIVEHGGKLIYNVILKRHSIGDVRLISCKTTTECKALI 751
Query: 368 NKGLKYEAAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEVDEFSDLY 427
++G D++H +WVLDC + K+L+ ++P Y ++S + ++ VD D +
Sbjct: 752 DRGY---------DILHPNWVLDCIAYKRLILIEPNYCFNVSQKMRAVAEKRVDCLGDSF 802
>gi|403182787|gb|EJY57630.1| AAEL017365-PA, partial [Aedes aegypti]
Length = 925
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/388 (23%), Positives = 171/388 (44%), Gaps = 37/388 (9%)
Query: 59 CWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDL 117
C + N + + + + I+ EG+V+K S + P +R+ W K+KP+YI SD
Sbjct: 408 CHRIKVKNSEHLVELLNQAIDAHQEGVVIKKENSVYSPNERNAGWYKIKPDYIDNMVSDF 467
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALA---ERPAPDTYPRRFISFCRVGTGLSDEELDAVV 174
D+LIIGG+Y R + FLV + +R P F++ +VG GLS+++ +
Sbjct: 468 DLLIIGGFYNFKRTF--INTFLVGVMDDRDRENP-----VFLAVTKVGIGLSNDQWKQLN 520
Query: 175 TKLKPYFRKYEYPKRA-------PPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTI 227
+ L+ ++++ K PP + PDVWI P+ SI+L + +
Sbjct: 521 SSLRQHWQEVVARKEGRTTVTEEPPELRW----GQTPPDVWIH-PKHSIVLQLKGS-ELV 574
Query: 228 RSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEY----GGLQD 283
++ F+ Y++RFPRI +R DK + D + +L ++ + K + L
Sbjct: 575 QTSSFATTYTIRFPRITAIRSDKTYTDVTSKDEYDQLCAANTKVAKLAKRHVTNSSNLPG 634
Query: 284 DKPKQFRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAY-SLDSLH 342
K K+ ++ + + +H ++ V I ++ S + F ++ S L
Sbjct: 635 RKRKKTSPLQRTRSTRLHLSVNHIDESTVDLID---NVCSGLDFCILSTSKGQPSTADLE 691
Query: 343 KMVVENGGTFSMNLNNSVTHCVAADNKGLKYEAAKRRG-DVIHYSWVLDCCS----QKKL 397
K++ +GG N +A D L + +V W++ ++KL
Sbjct: 692 KIIRRHGGRIVKNPGPKTYLTIAGDRTFLVNRIIDNQVYNVATVDWLMRALGGSEKKEKL 751
Query: 398 LQLQPKYYLHLSDSSKKKLQEEVDEFSD 425
L L+P L + + +++L + D + D
Sbjct: 752 LALKPNDMLATTATLREELSDNFDRYGD 779
>gi|342181689|emb|CCC91169.1| putative DNA ligase I, partial [Trypanosoma congolense IL3000]
Length = 710
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 115/222 (51%), Gaps = 23/222 (10%)
Query: 62 LVAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRAGSD-LD 118
L +++VD+++ F I++ EG+++K L + + P RS WLKLK +Y+ +D LD
Sbjct: 497 LDSNDVDDIQTFLDRAIKDGTEGLMVKTLEEEATYVPAKRSHFWLKLKKDYMDGVTDTLD 556
Query: 119 VLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLK 178
++ IG YYG G+R G FL++ DT + S C++GTG DE+L+++ L
Sbjct: 557 LVPIGAYYGKGKRTGVFGGFLLSCY-----DTESDEYQSICKIGTGFQDEQLESITKSLG 611
Query: 179 PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRSEV-FS 233
+ + P +Y+ + ++PDVW+++ + K+ LSI+ V S
Sbjct: 612 ASVLEDQ------PRYYR----TDDKPDVWLQASQVWEVKAADLSISPAHFAAYGLVDAS 661
Query: 234 APYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKG 275
+LRFPR RVR DK H+ E+ H+ + + G
Sbjct: 662 KGIALRFPRFVRVREDKKAHEATSAMQVAEMYHNQSLAQKNG 703
>gi|6324578|ref|NP_014647.1| DNA ligase (ATP) DNL4 [Saccharomyces cerevisiae S288c]
gi|2494163|sp|Q08387.1|DNLI4_YEAST RecName: Full=DNA ligase 4; AltName: Full=DNA ligase II; AltName:
Full=DNA ligase IV; AltName:
Full=Polydeoxyribonucleotide synthase [ATP] 4
gi|1420096|emb|CAA99193.1| DNL4 [Saccharomyces cerevisiae]
gi|285814894|tpg|DAA10787.1| TPA: DNA ligase (ATP) DNL4 [Saccharomyces cerevisiae S288c]
Length = 944
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 100/420 (23%), Positives = 176/420 (41%), Gaps = 96/420 (22%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLII 122
+ V+ ++K + I EG+VLK S + R+ W+K+KPEY+ G +LD+++I
Sbjct: 423 CYGVESIKKSLEVAISLGSEGVVLKYYNSSYNVASRNNNWIKVKPEYLEEFGENLDLIVI 482
Query: 123 GGYYGSGRRGGEVAQFLVALA-----------------------ERPAPDTYPR--RFIS 157
G R G+ F++ L E+ ++ R + +S
Sbjct: 483 G------RDSGKKDSFMLGLLVLDEEEYKKHQGDSSEIVDHSSQEKHIQNSRRRVKKILS 536
Query: 158 FCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSII 217
FC + G+S EE + K + ++++ + APP+ + + P WI+ P +SI+
Sbjct: 537 FCSIANGISQEEFKEIDRKTRGHWKRTS--EVAPPA--SILEFGSKIPAEWID-PSESIV 591
Query: 218 LSITS---DIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVE-LVHSSNGTTQ 273
L I S D + ++ +L R+RYDK W DC + E SN + Q
Sbjct: 592 LEIKSRSLDNTETNMQKYATNCTLYGGYCKRIRYDKEWTDCYTLNDLYESRTVKSNPSYQ 651
Query: 274 KGKEYGGLQDDKPKQ------FRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVF 327
+ GL K K+ F +RK Q +S+I F+ ++F
Sbjct: 652 AERSQLGLIRKKRKRVLISDSFHQNRK--------------QLPISNI------FAGLLF 691
Query: 328 YFV------NVPPAYSLDSLHKMVVENGGTFSMNL--------------NNSVTHCVAAD 367
Y + + + L K +VE+GG N+ + T C A
Sbjct: 692 YVLSDYVTEDTGIRITRAELEKTIVEHGGKLIYNVILKRHSIGDVRLISCKTTTECKALI 751
Query: 368 NKGLKYEAAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEVDEFSDLY 427
++G D++H +WVLDC + K+L+ ++P Y ++S + ++ VD D +
Sbjct: 752 DRGY---------DILHPNWVLDCIAYKRLILIEPNYCFNVSQKMRAVAEKRVDCLGDSF 802
>gi|50554875|ref|XP_504846.1| YALI0F01034p [Yarrowia lipolytica]
gi|49650716|emb|CAG77648.1| YALI0F01034p [Yarrowia lipolytica CLIB122]
Length = 738
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 108/215 (50%), Gaps = 26/215 (12%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLKDLGSK---WEPGDRSGKWLKLKPEYIRA-GSD 116
S+ NV+E++ F ++I++ EG+++K L K +EP RS WLK+K +YI G
Sbjct: 530 SMDTSNVEEIQTFLDQSIKDSCEGLMVKLLEGKESGYEPSKRSRNWLKVKKDYIDGIGDS 589
Query: 117 LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTK 176
LD++I+GGY+G G+R FL+ + + + + F + C+ TG S+E L + K
Sbjct: 590 LDLVILGGYFGKGKRSQWYGAFLLGVYNQDSEE-----FETVCKTATGFSEEMLQKMYDK 644
Query: 177 LKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA-- 234
LKP + P S + PDVW + ++I + +D+ S V+ A
Sbjct: 645 LKPTVIE------TPHSDVSYDSTPANLPDVWFDP--STVIEILAADLSL--SPVYKAGI 694
Query: 235 -----PYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
SLRFPR RVR DK HD VE+
Sbjct: 695 DQMDRGISLRFPRFIRVRDDKGIHDATSSDQIVEM 729
>gi|403182469|gb|EJY57407.1| AAEL017561-PA, partial [Aedes aegypti]
Length = 798
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/388 (23%), Positives = 171/388 (44%), Gaps = 37/388 (9%)
Query: 59 CWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDL 117
C + N + + + + I+ EG+V+K S + P +R+ W K+KP+YI SD
Sbjct: 406 CHRIKVKNSEHLVELLNQAIDAHQEGVVIKKENSVYSPNERNAGWYKIKPDYIDNMVSDF 465
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALA---ERPAPDTYPRRFISFCRVGTGLSDEELDAVV 174
D+LIIGG+Y R + FLV + +R P F++ +VG GLS+++ +
Sbjct: 466 DLLIIGGFYNFKRTF--INTFLVGVMDDRDRENP-----VFLAVTKVGIGLSNDQWKQLN 518
Query: 175 TKLKPYFRKYEYPKRA-------PPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTI 227
+ L+ ++++ K PP + PDVWI P+ SI+L + +
Sbjct: 519 SSLRQHWQEVVARKEGRTTVTEEPPELRW----GQTPPDVWIH-PKHSIVLQLKGS-ELV 572
Query: 228 RSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEY----GGLQD 283
++ F+ Y++RFPRI +R DK + D + +L ++ + K + L
Sbjct: 573 QTSSFATTYTIRFPRITAIRSDKTYTDVTSKDEYDQLCAANTKVAKLAKRHVTNSSNLPG 632
Query: 284 DKPKQFRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAY-SLDSLH 342
K K+ ++ + + +H ++ V I ++ S + F ++ S L
Sbjct: 633 RKRKKTSPLQRTRSTRLHLSVNHIDESTVDLID---NVCSGLDFCILSTSKGQPSTADLE 689
Query: 343 KMVVENGGTFSMNLNNSVTHCVAADNKGLKYEAAKRRG-DVIHYSWVLDCCS----QKKL 397
K++ +GG N +A D L + +V W++ ++KL
Sbjct: 690 KIIRRHGGRIVKNPGPKTYLTIAGDRTFLVNRIIDSQVYNVATVDWLMRALGGSEKKEKL 749
Query: 398 LQLQPKYYLHLSDSSKKKLQEEVDEFSD 425
L L+P L + + +++L + D + D
Sbjct: 750 LTLKPNDMLATTATLREELSDNFDRYGD 777
>gi|410075868|ref|XP_003955516.1| hypothetical protein KAFR_0B00830 [Kazachstania africana CBS 2517]
gi|372462099|emb|CCF56381.1| hypothetical protein KAFR_0B00830 [Kazachstania africana CBS 2517]
Length = 710
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 106/210 (50%), Gaps = 20/210 (9%)
Query: 62 LVAHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDL 117
L +N+DE++ F +++++ EG+++K L S +EP RS WLKLK +Y+ G L
Sbjct: 505 LSTNNLDELQLFLDQSVKDSCEGLMVKVLDGEDSHYEPSKRSRNWLKLKKDYLDGVGDSL 564
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D+ ++G +YG G+R G FL+ + + F + C++GTG SDE L ++ +L
Sbjct: 565 DLCVLGAFYGRGKRTGTYGGFLLGCYNQDTGE-----FETACKIGTGFSDEVLQSLYDRL 619
Query: 178 KPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSI---TSDIRTIRSEVFSA 234
K P + Y +S +PDVW E +L+ S I + +S
Sbjct: 620 K------STTIDGPKATY--IYDSSAQPDVWFEPTLLFEVLTADLSMSPIYKAGASTYSK 671
Query: 235 PYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
SLRFPR R+R DK + + +EL
Sbjct: 672 GISLRFPRFIRLREDKSVEEATSSEQIIEL 701
>gi|301115426|ref|XP_002905442.1| DNA ligase, putative [Phytophthora infestans T30-4]
gi|262110231|gb|EEY68283.1| DNA ligase, putative [Phytophthora infestans T30-4]
Length = 3896
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/237 (32%), Positives = 110/237 (46%), Gaps = 45/237 (18%)
Query: 67 VDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIG 123
VD+V F +E + EG+++K L + +EP +RS KWLKLK +Y+ G D++ IG
Sbjct: 706 VDKVRNFLEEAVRENCEGLMVKTLEKEATYEPANRSHKWLKLKKDYLDGIGDSADLVPIG 765
Query: 124 GYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRK 183
+YG G+R G +L+A + PDT F ++GTGLSDE L T+LK
Sbjct: 766 AFYGRGKRTGVYGAYLLACYD---PDT--EMFQPITKLGTGLSDEVLKQFYTQLK----- 815
Query: 184 YEYPKRAPPSFYQVTNNSKERPDVWIE--------------SPEKSIILSITSDIRTIRS 229
E PPS Y + K PDVW E SP+ + + + + R I
Sbjct: 816 -EKVVDKPPSDYAIGEGIK--PDVWFEASCVWEILGADLSISPKYTAAIGLVAKDRGI-- 870
Query: 230 EVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS------SNGTTQKGKEYGG 280
SLRFPR R+R DK + +L + +NG + +GG
Sbjct: 871 -------SLRFPRFIRIRDDKDTTQATNSSQIADLYRAQGLTTLTNGMADRSTMWGG 920
>gi|259479746|tpe|CBF70249.1| TPA: DNA ligase (Eurofung) [Aspergillus nidulans FGSC A4]
Length = 932
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 115/234 (49%), Gaps = 25/234 (10%)
Query: 65 HNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVL 120
+++++++ ++++ EG+++K L S +EP RS WLK+K +Y+ G LD+L
Sbjct: 707 NDLEQIQTLLDDSVKASCEGLMVKMLDTEESGYEPSKRSRNWLKVKKDYLAGVGDSLDLL 766
Query: 121 IIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPY 180
++G YYG G+R FL+A A ++ + + + C +GTG S+ LD + T L P
Sbjct: 767 VLGAYYGRGKRTSVYGAFLLA-----AYNSNSQTYETICNIGTGFSEAMLDELHTTLSPL 821
Query: 181 FRKYEYPKRAPPSFYQVTNNSKERPDVWIES----PEKSIILSITSDIRTIRSEVFSAP- 235
+ PK FY + K++PDVW+E K+ L+++ + E
Sbjct: 822 V--IDRPK----PFYSHSTVPKDQPDVWLEPRYVWEVKTADLTLSPRYKAAADEFVGTTG 875
Query: 236 -----YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 284
SLRFPR +VR DK ++ E+ ++G GG+ DD
Sbjct: 876 GGGKGVSLRFPRFIKVRDDKKPEQATTTRAVAEMYRKQEAVAKEGSGKGGVDDD 929
>gi|66821251|ref|XP_644124.1| DNA ligase I [Dictyostelium discoideum AX4]
gi|74926714|sp|Q869E1.1|DNL1_DICDI RecName: Full=DNA ligase 1; AltName: Full=DNA ligase I; AltName:
Full=Polydeoxyribonucleotide synthase [ATP] 1
gi|60472186|gb|EAL70139.1| DNA ligase I [Dictyostelium discoideum AX4]
Length = 1192
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 115/221 (52%), Gaps = 25/221 (11%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLGSK--WEPGDRSGKWLKLKPEYIRAGSD-LDVLII 122
+V++++ + +E +E EG+++K L K +EP RS WLK+K +Y++ +D LD++ I
Sbjct: 979 DVNDIQSYLEEAVEGNCEGLMVKTLKEKSIYEPSRRSYNWLKIKKDYMQGMTDSLDLVPI 1038
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
G +YG G+R G +L+A D F + C++GTG SDE+L ++LKP+
Sbjct: 1039 GAWYGKGKRTGTYGAYLLACY-----DENNEEFQTLCKIGTGFSDEQLTTFTSQLKPHLI 1093
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPE-----KSIILSITSDIRTIRSEVF--SAP 235
P + ++ +++ K PDVW SP + LSI S + T S + +
Sbjct: 1094 ------NQPRNQFRFSDSIK--PDVWF-SPSCVWEVLAADLSI-SPVHTAASGILDPNKG 1143
Query: 236 YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGK 276
+LRFPR R+R DK D V++ + +Q K
Sbjct: 1144 IALRFPRFIRIRPDKSPEDATSSDQVVDMYQNQKINSQSSK 1184
>gi|340520170|gb|EGR50407.1| DNA ligase [Trichoderma reesei QM6a]
Length = 960
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 117/412 (28%), Positives = 191/412 (46%), Gaps = 39/412 (9%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLII 122
A + D +E +E + N EG+VLK+ S + R+ WLK+KPEY+ G LD +II
Sbjct: 446 ATSADAIEPLLREVVANASEGLVLKNPRSMYRLNSRNDDWLKVKPEYMSEFGESLDCVII 505
Query: 123 GGYYGSGRRGGEVAQFLVALAERP---APDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 179
GGYYGSGRRGG ++ FL L P P + SF +VG G E+ + +
Sbjct: 506 GGYYGSGRRGGMLSSFLCGLRVSPNHIQAGANPEKCFSFFKVGGGFRTEDYAEIRHRTDG 565
Query: 180 YFRKYEYPKRAPPSFYQVTNNSK---ERPDVWIESPEKSIILSITSDIRTIRSEVFSAPY 236
+ +++ PK P + ++ ERPD+WI K ++ S+ F+ +
Sbjct: 566 KWMEWD-PKNPPSEYIELGGGEAKQYERPDMWIRP--KDSVVVSVKAASVGPSDQFARGF 622
Query: 237 SLRFPRIDRVRYDKPWHDCLDVQSFVEL---VHSSNGTTQKGKEYGGLQDDKPKQFRSSR 293
+LRFPR R+R D+ W L ++ F EL V S T+ E + R +
Sbjct: 623 TLRFPRFRRLRLDRSWDTALSLEEFQELKQRVESELKATEMTVE---------DRRRRNP 673
Query: 294 KGEKKNVSI-----VPSHFLQTDVSDIKG-ETSIFSDMVFYFVNVPPAYSLDSLHKMVVE 347
K KK + I P F +G E + S+ + + P L ++ E
Sbjct: 674 KRIKKELVIAGDDTAPPLFEGNKTKLFEGLEFCVLSESLKPYKKTKP-----QLEAIIKE 728
Query: 348 NGGTFSMNLNNSVTHCVAADNKGLKYEAAKRRG--DVIHYSWVLDCCSQKK---LLQLQP 402
NGG+ S + AD + +K + + G D+I W+ DC Q LL +P
Sbjct: 729 NGGSISQRAAAGTRMILIADKRVVKVASLIKDGNADIIRPRWIRDCLEQPDGGFLLPYEP 788
Query: 403 -KYYLHLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNVDRSEDPKTID 453
++ H +D+ + + D + D Y D+D+ ++++L+ ++ + ED +T D
Sbjct: 789 GRHIFHATDALAEVAAQNTDRYGDSYARDVDVEELRELMRDMPKLEDRQTFD 840
>gi|159489817|ref|XP_001702891.1| DNA ligase [Chlamydomonas reinhardtii]
gi|158271019|gb|EDO96848.1| DNA ligase [Chlamydomonas reinhardtii]
Length = 813
Score = 100 bits (249), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 115/223 (51%), Gaps = 19/223 (8%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLII 122
+ +V+E+E F E++E EG+++K LG +EP RS WLKLK +Y+ G DV+ +
Sbjct: 604 SRDVEELESFLNESVEAGTEGLIVKTLGDTYEPSKRSSHWLKLKKDYMEGVGDTFDVVPV 663
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
G ++G G+R G +L+A+ + PDT + IS ++GTG S+E+L + ++P
Sbjct: 664 GAFFGKGKRTGVFGAYLLAVYD---PDTETYQTIS--KLGTGFSEEQLSQLAEAMRP--- 715
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESP----EKSIILSITSDIRTIRSEV-FSAPYS 237
+ P+ P +Y T + PDVW ++ K+ LSI+ + V + S
Sbjct: 716 -HTIPQ--PRHYY--TWDESLVPDVWFDAAVVWEVKAADLSISPRHKAALGLVDPTKGIS 770
Query: 238 LRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGG 280
+RFPR+ RVR DK D ++ + Q+ + G
Sbjct: 771 IRFPRLIRVRDDKSPEDATSAAQVADMFRNQAVIRQQKAQVSG 813
>gi|195431541|ref|XP_002063795.1| GK15713 [Drosophila willistoni]
gi|194159880|gb|EDW74781.1| GK15713 [Drosophila willistoni]
Length = 744
Score = 100 bits (249), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 120/269 (44%), Gaps = 56/269 (20%)
Query: 35 VCVHVY-------------MLSQLRSQIMAADQTGEPCW----SLVAHNVDEVEKFFKET 77
VCV+++ LS+ R ++ Q E W +L +++DEV++F +E+
Sbjct: 479 VCVYIFDLLYINGMALVTKPLSERRKLLLEHFQEVEGEWKFATALNTNDMDEVQQFLEES 538
Query: 78 IENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIGGYYGSGRRGGE 134
++ EG+++K L + +E RS WLKLK +Y+ G LD++++GGY G GRR G
Sbjct: 539 VKGNCEGLMVKTLDEEATYEIAKRSRNWLKLKKDYLSNVGDSLDLVVLGGYRGKGRRTGT 598
Query: 135 VAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSF 194
FL+A D + S C++GTG +DE+L L P S+
Sbjct: 599 FGGFLLACY-----DAENEEYQSICKIGTGFTDEDLKVHSESLGKSVIS------GPKSY 647
Query: 195 YQVTNNSKERPDVWIE--------------SPEKSIILSITSDIRTIRSEVFSAPYSLRF 240
Y+ +S PD W E SP + I + R I SLRF
Sbjct: 648 YRY--DSSLEPDAWFEPVQVWEVKCADLSLSPIHRAAIGIVDNERGI---------SLRF 696
Query: 241 PRIDRVRYDKPWHDCLDVQSFVELVHSSN 269
PR R+R DK + D Q + S +
Sbjct: 697 PRFIRIRDDKSSENATDAQQVANMYQSQD 725
>gi|67539798|ref|XP_663673.1| hypothetical protein AN6069.2 [Aspergillus nidulans FGSC A4]
gi|40738854|gb|EAA58044.1| hypothetical protein AN6069.2 [Aspergillus nidulans FGSC A4]
Length = 886
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 115/234 (49%), Gaps = 25/234 (10%)
Query: 65 HNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVL 120
+++++++ ++++ EG+++K L S +EP RS WLK+K +Y+ G LD+L
Sbjct: 661 NDLEQIQTLLDDSVKASCEGLMVKMLDTEESGYEPSKRSRNWLKVKKDYLAGVGDSLDLL 720
Query: 121 IIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPY 180
++G YYG G+R FL+A A ++ + + + C +GTG S+ LD + T L P
Sbjct: 721 VLGAYYGRGKRTSVYGAFLLA-----AYNSNSQTYETICNIGTGFSEAMLDELHTTLSPL 775
Query: 181 FRKYEYPKRAPPSFYQVTNNSKERPDVWIES----PEKSIILSITSDIRTIRSEVFSAP- 235
+ PK FY + K++PDVW+E K+ L+++ + E
Sbjct: 776 V--IDRPK----PFYSHSTVPKDQPDVWLEPRYVWEVKTADLTLSPRYKAAADEFVGTTG 829
Query: 236 -----YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 284
SLRFPR +VR DK ++ E+ ++G GG+ DD
Sbjct: 830 GGGKGVSLRFPRFIKVRDDKKPEQATTTRAVAEMYRKQEAVAKEGSGKGGVDDD 883
>gi|344232319|gb|EGV64198.1| ATP-dependent DNA ligase [Candida tenuis ATCC 10573]
Length = 715
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 114/227 (50%), Gaps = 23/227 (10%)
Query: 56 GEPCWSLV--AHNVDEVEKFFKETIENRDEGIVLKDLGSK---WEPGDRSGKWLKLKPEY 110
G+ C++ + N+DE++ F +++++ EG+++K L SK +EP RS WLKLK +Y
Sbjct: 502 GKFCFATSRNSSNLDELQIFLDQSVKDSCEGLMVKMLNSKESYYEPSKRSRNWLKLKKDY 561
Query: 111 IRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEE 169
+ G LD++++G Y G G+R G FL+A + + F + C++GTG SDE+
Sbjct: 562 LAGVGDSLDLVVVGAYNGRGKRTGNYGGFLLA-----SYNDDTGEFETTCKIGTGFSDED 616
Query: 170 LDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSI---TSDIRT 226
L ++ L P + PK + + PDVW E +L+ S I
Sbjct: 617 LTSLYNSLHP--TEISQPKGS------YVYDPSAVPDVWFEPTTLFEVLTADLSLSPIYK 668
Query: 227 IRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQ 273
+ F+ SLRFPR R+R DK D + +E +S + Q
Sbjct: 669 AGHQEFTKGISLRFPRFLRIREDKGVEDATTSEQVIEF-YSKQASVQ 714
>gi|358338704|dbj|GAA28692.2| DNA ligase 1 [Clonorchis sinensis]
Length = 553
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/236 (31%), Positives = 115/236 (48%), Gaps = 32/236 (13%)
Query: 42 LSQLRSQIMAADQTGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDR 99
SQ+ + M A SL + + +++ F +E+I+ EG+++K L S +E R
Sbjct: 321 FSQIHGEFMLAT-------SLDSSDTEQIASFLEESIKGNCEGLMVKTLDRNSTYEIAKR 373
Query: 100 SGKWLKLKPEYI-RAGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISF 158
S WLKLK +Y+ G LD+++IGG++GSG+R G FL+A D + +
Sbjct: 374 SHNWLKLKKDYLDNVGDTLDLVVIGGFHGSGKRAGRYGGFLLACY-----DAECEEYQTI 428
Query: 159 CRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----K 214
C++GTG++DE+L K YF+ +Y ++YQ PD W E + K
Sbjct: 429 CKIGTGMTDEDL----AKFSAYFK--DYIVDNAKAYYQFAPGLV--PDHWFEPTQVWEVK 480
Query: 215 SIILSITSDIRTIRSEVFSAP---YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 267
+ LSI+ + + P SLRFPR R+R DK D Q E+ S
Sbjct: 481 AADLSISPAHKAAAG--LADPEKGISLRFPRFLRIREDKKPEDATTAQQVYEMYKS 534
>gi|270004895|gb|EFA01343.1| hypothetical protein TcasGA2_TC003800 [Tribolium castaneum]
Length = 592
Score = 100 bits (248), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/241 (32%), Positives = 120/241 (49%), Gaps = 35/241 (14%)
Query: 56 GEPCW--SLVAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYI 111
GE C+ SL + ++EV++F +E+I+ EG+++K L + +E RS WLKLK +Y+
Sbjct: 364 GEWCFVTSLDTNTMEEVQEFLEESIKGNCEGLMVKTLEKEATYEIAKRSHNWLKLKKDYL 423
Query: 112 -RAGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEEL 170
G LD+++IGGY G G+R G FL+A ++ + + F S C++GTG SDE L
Sbjct: 424 DSCGDTLDLVVIGGYLGKGKRTGTYGGFLLACYDQESEE-----FQSICKIGTGFSDEAL 478
Query: 171 DAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSIT----S 222
LK + + P +Y+ + PD W +S + K LS++ +
Sbjct: 479 QQHSEFLK------NHVIQGPKPYYRF--DGSHEPDHWFDSVQVWEVKCADLSLSPVHRA 530
Query: 223 DIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFV------ELVHSSNGTTQKGK 276
I + SE SLRFPR R+R DK + Q E V + GT+ K
Sbjct: 531 GIGIVDSE---KGISLRFPRFVRIREDKSSEEATSSQQVASMYSNQEQVKNQAGTSNKAA 587
Query: 277 E 277
E
Sbjct: 588 E 588
>gi|330790648|ref|XP_003283408.1| hypothetical protein DICPUDRAFT_25751 [Dictyostelium purpureum]
gi|325086673|gb|EGC40059.1| hypothetical protein DICPUDRAFT_25751 [Dictyostelium purpureum]
Length = 648
Score = 100 bits (248), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 117/228 (51%), Gaps = 28/228 (12%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLGSK--WEPGDRSGKWLKLKPEYIRAGSD-LDVLII 122
+V++++ + +E +E EG+++K L K +EP RS WLK+K +Y++ +D LD++ I
Sbjct: 434 DVNDIQSYLEEAVEGNCEGLMVKTLKEKSIYEPSRRSYNWLKIKKDYMQGMTDSLDLVPI 493
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
G +YG G+R G +L+A D F + C++GTG SD++L + +LKP+
Sbjct: 494 GAWYGKGKRTGTYGAYLLACY-----DEDNEEFQTLCKIGTGFSDKDLSSFTEQLKPHV- 547
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVF-----SAPYS 237
P + ++++++ K PDVW+ + +L+ I + + + + +
Sbjct: 548 -----INQPRNMFRISDSIK--PDVWLSPSQVWEVLAADLSISPVHTAAYGNLESNKGIA 600
Query: 238 LRFPRIDRVRYDKPWHDCLDVQSFVELV-------HSSNGTTQKGKEY 278
LRFPR R R DK D + V + H+S QK ++Y
Sbjct: 601 LRFPRFIRTREDKSPEDATSSEQVVLMYQNQKINNHNSESKPQKDEDY 648
>gi|84453228|dbj|BAE71211.1| putative DNA ligase [Trifolium pratense]
Length = 682
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/198 (36%), Positives = 106/198 (53%), Gaps = 21/198 (10%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYIR-AGSDL 117
S +++V+E++KF + I+ EG+++K L + +EP RS WLKLK +Y+ G L
Sbjct: 466 STTSNDVEEIQKFLDQAIDASCEGLIIKTLHEDATYEPSKRSLNWLKLKKDYMENIGDSL 525
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D++ IG ++G G+R G FL+A D F S ++GTG +E L+ T L
Sbjct: 526 DLVPIGAFHGRGKRTGVYGAFLLACY-----DNDNEEFQSIAKIGTGFKEEVLEERSTSL 580
Query: 178 KPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRSEVFS 233
R PK P S+YQ ++ PDVW E+ E K+ L+I+ R +V S
Sbjct: 581 ----RSKVIPK--PKSYYQYGEST--NPDVWFEASEVWEVKAADLTISPVYRAAVGKVDS 632
Query: 234 -APYSLRFPRIDRVRYDK 250
SLRFPR+ RVR DK
Sbjct: 633 NKGISLRFPRLVRVRPDK 650
>gi|113913527|gb|ABI48907.1| LIG4 [Saccharomyces cariocanus]
Length = 942
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 97/413 (23%), Positives = 171/413 (41%), Gaps = 82/413 (19%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLII 122
+ V+ ++K + I EG+VLK S + R+ W+K+KPEY+ G +LD++II
Sbjct: 423 CYGVESIKKSLEVAISLGSEGVVLKYYNSSYNVASRNNNWIKVKPEYLEEFGENLDLIII 482
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTY--------------------------PRRFI 156
GR G+ F++ L + Y ++ +
Sbjct: 483 ------GRDSGKKDSFMLGLVVLDEKEMYRKDQGSSSEVVDDSNQGENIQNSRKKVKKIL 536
Query: 157 SFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSI 216
SFC + G+S EE + K + Y+++ PS + + P WI+ P KSI
Sbjct: 537 SFCSIANGISQEESKEIDRKTRGYWKR---TSDVVPS--SILEFGSKIPTEWID-PSKSI 590
Query: 217 ILSITS---DIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQ 273
+L I S D + ++ +L R+RYDK W DC +
Sbjct: 591 VLEIKSRSLDNTETDMQKYATSCTLYGGYCKRIRYDKEWTDCYTLDD------------- 637
Query: 274 KGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTDVSD-------IKGETSIFSDMV 326
L +++ +F S + EK + +V + +SD K ++IF+ +
Sbjct: 638 -------LYENRAAKFNPSYQTEKSQLELVRKKRKRVLISDNFHQNRKRKPISNIFAGLF 690
Query: 327 FYFV------NVPPAYSLDSLHKMVVENGGTFSMNLNNSVTHCVA-----ADNKGLKYEA 375
FY + + + L +V++GG N+ HC+ + + +A
Sbjct: 691 FYVLSDYVTKDTGVRITRGELEDAIVKHGGKLIYNVVLK-RHCIGKVRLISCKTTTECKA 749
Query: 376 AKRRG-DVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEVDEFSDLY 427
RG D++H SWV+DC + KKL+ ++P Y +S + ++ VD D +
Sbjct: 750 LIDRGYDILHPSWVVDCITYKKLILIEPIYCFSVSQKMRAVAEKRVDYLGDSF 802
>gi|50286753|ref|XP_445806.1| hypothetical protein [Candida glabrata CBS 138]
gi|74610567|sp|Q6FVD8.1|DNLI4_CANGA RecName: Full=DNA ligase 4; AltName: Full=DNA ligase IV; AltName:
Full=Polydeoxyribonucleotide synthase [ATP] 4
gi|49525112|emb|CAG58725.1| unnamed protein product [Candida glabrata]
Length = 946
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 129/542 (23%), Positives = 227/542 (41%), Gaps = 58/542 (10%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDV 119
S+ A++ ++K ++ + EGI+LK S++ RS W+K+KPEY+ + G ++D+
Sbjct: 435 SIRANDEQMIKKSLEKALSVGSEGIILKRYDSRYVIASRSDDWIKIKPEYLEQFGENMDL 494
Query: 120 LIIG---GYYGSGRRG----GEVAQ---FLVALAERPAPDTYPRRFISFCRVGTGLSDEE 169
+++G S G EV Q +V R F+S C + G+S+EE
Sbjct: 495 VLMGRDPSKKDSLMLGLLDYEEVIQDSPIMVNSQSSEENSQRFRGFVSLCIIANGISNEE 554
Query: 170 LDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITS-DIRTIR 228
+ K K + E + PP Y + P WI+ P+KS+IL I + + R
Sbjct: 555 YKEIDRKTKGLWNDSE---KIPPLEYM--KFGSKVPRQWID-PKKSLILEIKARSLDNTR 608
Query: 229 S--EVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKP 286
S F+A +L ++R DK W C +Q F E S N ++G KP
Sbjct: 609 SSERKFAAGCTLFGGYCRQIREDKNWKTCYTLQEF-ERAKSGNNWRKRGSS-------KP 660
Query: 287 KQFRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVF-----YFVNVPPAYSLDS- 340
++ S ++ + N+ + L+ D ++++ + IF M F YF V S
Sbjct: 661 QKVISKKR--RYNIISSVNKALE-DFAELEHRSDIFDGMYFYVLSDYFDGVKRKRIKKSE 717
Query: 341 LHKMVVENGG-----TFSMNLNNSVTHCVAADNKGLKYEAAKRRGDVIHYSWVLDCCSQK 395
+ K++V NGG + N N + +++ N R D+I WV DC
Sbjct: 718 IQKVIVANGGQLVQNVITRNYNLNDLRIISSRNTVECNSLIVRGYDIISPKWVFDCLLSG 777
Query: 396 KLLQLQPKYYLHLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNVDRSEDPKTIDYY 455
K+++L+P + + S + +D++ D Y D++ + L S + + D
Sbjct: 778 KIMKLEPSHCFNFSKQLMDYAYKRIDQYGDPYERDINKYEWSSLTSEKICTTAKQQPDVQ 837
Query: 456 KKKYCPQDKWSCFHGCCIYFYHSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNLANA 515
FHG ++ + + + +GGKV N L++A
Sbjct: 838 FDNSLMDVPHFLFHGRIVFLLSDNNNIQKE------------SFMVDAYGGKVTNELSSA 885
Query: 516 THVVVL-SVLGYDVN-FNSLTESFTAREKHLLWNKKLHVVRSQWLEDCLAKEQKSEEYEY 573
V+V+ +V +N S ++ H + +V WL DC+ + + E Y
Sbjct: 886 NLVIVVGAVTQRRINDIRKQISSEVIKQDHP--PRIPDMVSEGWLYDCIKQNTQVAEDNY 943
Query: 574 SL 575
L
Sbjct: 944 RL 945
>gi|302697907|ref|XP_003038632.1| hypothetical protein SCHCODRAFT_46359 [Schizophyllum commune H4-8]
gi|300112329|gb|EFJ03730.1| hypothetical protein SCHCODRAFT_46359, partial [Schizophyllum
commune H4-8]
Length = 833
Score = 99.8 bits (247), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 115/233 (49%), Gaps = 31/233 (13%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDL---GSKWEPGDRSGKWLKLKPEYIRA-GSDLDV 119
+ V+E++ F +E++++ EG+++K L S +EP RS WLKLK +Y+ G LD+
Sbjct: 618 SETVEEIQTFLEESVKDGCEGLMVKMLESDASYYEPSRRSINWLKLKKDYLAGVGDSLDL 677
Query: 120 LIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 179
+++GGYYG G+R FL+A D + + C++GTG S+E L + LKP
Sbjct: 678 VVVGGYYGKGKRTNVYGAFLLACY-----DADSEEYQTICKIGTGFSEEALQSHYNVLKP 732
Query: 180 YFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPY--- 236
+ E P+ +PD+W E K + +T+D+ S V++A
Sbjct: 733 L--EMEKPRGD-------IKVGGAKPDIWFEP--KVVWEVLTADLSL--SPVYTAAMGLV 779
Query: 237 -----SLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 284
SLRFPR R+R DK + + E+ + Q G + G + DD
Sbjct: 780 DERGISLRFPRFIRIRDDKNADNATGCEQVAEM-YERQALAQGGGKKGKVVDD 831
>gi|303312547|ref|XP_003066285.1| ATP-dependent DNA ligase, putative [Coccidioides posadasii C735
delta SOWgp]
gi|240105947|gb|EER24140.1| ATP-dependent DNA ligase, putative [Coccidioides posadasii C735
delta SOWgp]
gi|320033623|gb|EFW15570.1| DNA ligase [Coccidioides posadasii str. Silveira]
Length = 969
Score = 99.8 bits (247), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/235 (31%), Positives = 112/235 (47%), Gaps = 30/235 (12%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLI 121
NV+E++ E++++ EG+++K L S +EP RS WLK+K +Y+ G LD+++
Sbjct: 746 NVEEIQTLLDESVKSSCEGLMVKMLDTEESGYEPSKRSRNWLKVKKDYLAGIGDSLDLVV 805
Query: 122 IGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYF 181
IG Y+G G+R FL+A A P+ + Y + C +GTG SD LD + L P
Sbjct: 806 IGAYFGKGKRTSVYGAFLLA-AYNPSTENYE----TICNIGTGFSDALLDELHKSLSP-- 858
Query: 182 RKYEYPKRAPPSFYQVTNNSKERPDVWIES----PEKSIILSITSDIRTIRSEVFSAP-- 235
P FY ++ K++PDVW E K+ L+I+ R EV
Sbjct: 859 ----LAISQPKPFYSHSSVPKDQPDVWFEPRLVWEVKAADLTISPRYRCASDEVMGMAGA 914
Query: 236 ----YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQ--KGKEYGGLQDD 284
SLRFPR + R DK + E+ T+ KGK G+ DD
Sbjct: 915 DGKGVSLRFPRYIKARDDKKPDQASTTRMVAEMYRKQESVTKEDKGK---GVDDD 966
>gi|70947733|ref|XP_743454.1| DNA ligase 1 [Plasmodium chabaudi chabaudi]
gi|56522958|emb|CAH76291.1| DNA ligase 1, putative [Plasmodium chabaudi chabaudi]
Length = 433
Score = 99.8 bits (247), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 111/209 (53%), Gaps = 23/209 (11%)
Query: 65 HNVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLI 121
+N+++++ F ++ IEN EG+++K L + +EP RS WLK+K +YI SD +D++
Sbjct: 218 NNIEDIDMFLQDAIENSCEGLMVKTLLDNASYEPSRRSLNWLKVKKDYIEGLSDSVDLVP 277
Query: 122 IGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYF 181
I GYYG G+R G F++A A ++ F + C+ GTG SDE L+A+ L
Sbjct: 278 IAGYYGKGKRSGVYGAFVLA-----AYNSETENFQTVCKAGTGFSDEILNALHESLSDKI 332
Query: 182 RKYEYPKRAPPSFYQVTNNSKERPDVWIES----PEKSIILSITSDIRTIRSEVFS--AP 235
P + S+Y+V++ K PDVW ++ K+ LS+ S + T V+S
Sbjct: 333 ----IPNKK--SYYEVSD--KLNPDVWFDAHYVWEIKAADLSL-SPVHTAAIGVYSDDKG 383
Query: 236 YSLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
LRFPR R+R DK Q VE
Sbjct: 384 IGLRFPRFLRLRDDKNPEQATTTQQIVEF 412
>gi|146416351|ref|XP_001484145.1| hypothetical protein PGUG_03526 [Meyerozyma guilliermondii ATCC
6260]
gi|146391270|gb|EDK39428.1| hypothetical protein PGUG_03526 [Meyerozyma guilliermondii ATCC
6260]
Length = 731
Score = 99.8 bits (247), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 108/204 (52%), Gaps = 27/204 (13%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDL---GSKWEPGDRSGKWLKLKPEYIRA-GSDLDV 119
+ N+DE++ F +++++ EG+++K L S +EP RS WLKLK +Y+ G LD+
Sbjct: 526 SSNLDELQAFLDQSVKDACEGLMVKMLHGPDSYYEPSKRSRNWLKLKKDYLAGVGDSLDL 585
Query: 120 LIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 179
++IG Y G G+R G FL+A + DT + + C++GTG S+++L + KL P
Sbjct: 586 VVIGAYIGRGKRTGGYGGFLLASYNQ---DT--GEYETTCKIGTGFSEQDLADLHAKLSP 640
Query: 180 YFRKYEYPKRAPPSFYQV-TNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPY-- 236
K P S+Y T NS PDVW E + +T+D+ S ++ A +
Sbjct: 641 TEIK------QPKSYYVYDTTNSNAVPDVWFEP--TLVFEVLTADLSL--SPIYKAAHHE 690
Query: 237 -----SLRFPRIDRVRYDKPWHDC 255
SLRFPR RVR DK D
Sbjct: 691 YGKGISLRFPRFLRVRDDKGIEDA 714
>gi|392863744|gb|EAS35487.2| DNA ligase I, ATP-dependent (dnl1) [Coccidioides immitis RS]
Length = 969
Score = 99.8 bits (247), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/236 (32%), Positives = 113/236 (47%), Gaps = 32/236 (13%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLI 121
NV+E++ E++++ EG+++K L S +EP RS WLK+K +Y+ G LD+++
Sbjct: 746 NVEEIQTLLDESVKSSCEGLMVKMLDTEESGYEPSKRSRNWLKVKKDYLAGIGDSLDLVV 805
Query: 122 IGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYF 181
IG Y+G G+R FL+A A P+ + Y + C +GTG SD LD + L P
Sbjct: 806 IGAYFGKGKRTSVYGAFLLA-AYNPSTENYE----TICNIGTGFSDALLDELHKSLSP-- 858
Query: 182 RKYEYPKRAPPSFYQVTNNSKERPDVWIESPE-----KSIILSITSDIRTIRSEVFSAP- 235
P FY ++ K++PDVW E P K+ L+I+ R EV
Sbjct: 859 ----LAISQPKPFYSHSSVPKDQPDVWFE-PRLVWEVKAADLTISPRYRCASDEVMGMAG 913
Query: 236 -----YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQ--KGKEYGGLQDD 284
SLRFPR + R DK + E+ T+ KGK G+ DD
Sbjct: 914 ADGKGVSLRFPRYIKARDDKKPDQASTTRMVAEMYRKQESVTKEDKGK---GVDDD 966
>gi|282165835|ref|NP_001164142.1| DNA ligase [Tribolium castaneum]
Length = 756
Score = 99.8 bits (247), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 79/249 (31%), Positives = 120/249 (48%), Gaps = 51/249 (20%)
Query: 56 GEPCW--SLVAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYI 111
GE C+ SL + ++EV++F +E+I+ EG+++K L + +E RS WLKLK +Y+
Sbjct: 528 GEWCFVTSLDTNTMEEVQEFLEESIKGNCEGLMVKTLEKEATYEIAKRSHNWLKLKKDYL 587
Query: 112 -RAGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEEL 170
G LD+++IGGY G G+R G FL+A ++ + + F S C++GTG SDE L
Sbjct: 588 DSCGDTLDLVVIGGYLGKGKRTGTYGGFLLACYDQESEE-----FQSICKIGTGFSDEAL 642
Query: 171 --------DAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIIL 218
+ V+ KPY+R + PD W +S + K L
Sbjct: 643 QQHSEFLKNHVIQGPKPYYR----------------FDGSHEPDHWFDSVQVWEVKCADL 686
Query: 219 SIT----SDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFV------ELVHSS 268
S++ + I + SE SLRFPR R+R DK + Q E V +
Sbjct: 687 SLSPVHRAGIGIVDSE---KGISLRFPRFVRIREDKSSEEATSSQQVASMYSNQEQVKNQ 743
Query: 269 NGTTQKGKE 277
GT+ K E
Sbjct: 744 AGTSNKAAE 752
>gi|119192832|ref|XP_001247022.1| hypothetical protein CIMG_00793 [Coccidioides immitis RS]
Length = 914
Score = 99.8 bits (247), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/235 (31%), Positives = 112/235 (47%), Gaps = 30/235 (12%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLI 121
NV+E++ E++++ EG+++K L S +EP RS WLK+K +Y+ G LD+++
Sbjct: 691 NVEEIQTLLDESVKSSCEGLMVKMLDTEESGYEPSKRSRNWLKVKKDYLAGIGDSLDLVV 750
Query: 122 IGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYF 181
IG Y+G G+R FL+A A P+ + Y + C +GTG SD LD + L P
Sbjct: 751 IGAYFGKGKRTSVYGAFLLA-AYNPSTENYE----TICNIGTGFSDALLDELHKSLSPLA 805
Query: 182 RKYEYPKRAPPSFYQVTNNSKERPDVWIES----PEKSIILSITSDIRTIRSEVFSAP-- 235
P FY ++ K++PDVW E K+ L+I+ R EV
Sbjct: 806 ISQPKP------FYSHSSVPKDQPDVWFEPRLVWEVKAADLTISPRYRCASDEVMGMAGA 859
Query: 236 ----YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQ--KGKEYGGLQDD 284
SLRFPR + R DK + E+ T+ KGK G+ DD
Sbjct: 860 DGKGVSLRFPRYIKARDDKKPDQASTTRMVAEMYRKQESVTKEDKGK---GVDDD 911
>gi|410074987|ref|XP_003955076.1| hypothetical protein KAFR_0A05050 [Kazachstania africana CBS 2517]
gi|372461658|emb|CCF55941.1| hypothetical protein KAFR_0A05050 [Kazachstania africana CBS 2517]
Length = 948
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 138/560 (24%), Positives = 243/560 (43%), Gaps = 91/560 (16%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIG- 123
N + + K + I EGIVLK+ S++ G R+ W+K+KPEY+ + G ++D+++IG
Sbjct: 425 NENIIRKSLEHAISVGSEGIVLKNYNSRYMIGSRNDSWIKIKPEYLEQFGENMDLIVIGR 484
Query: 124 -------GYYG-------SGRRGGEVAQFLVALA------ERPAPDTYPRRFISFCRVGT 163
Y G + E+ + +V L E P + + ++ +SFC +
Sbjct: 485 DSAKKDSFYCGLTVLDEEEEKLVEEIDKGVVNLVSDESDYENPENNRHIKKVVSFCMIAN 544
Query: 164 GLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITS- 222
G+S E + K + +++K E + PP ++ + P WIE PE S++L I +
Sbjct: 545 GISQNEYKEIYRKTRGFWKKTE--EVPPPP--ELIEFGTQVPMEWIE-PEHSVVLEIKAR 599
Query: 223 --DIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGG 280
D + F A +L R+R D W S EL ++ K Y G
Sbjct: 600 SLDNTESSCKRFKAGCTLYGGYCRRIRDDVDWKSSF---SLAELRRD-----RRIKHYPG 651
Query: 281 LQDDKPKQFRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFV------NVPP 334
+ K K +K + P + + DI+ + IF + FY + N
Sbjct: 652 TSE---KDTLLKSKKRRKKQLLTPLN-QNLNPRDIQTTSKIFDGLFFYILSDYFDTNENV 707
Query: 335 AYSLDSLHKMVVENGGTFSMNLNNSVTHCVAADNKGL---KYEA-----AKRRGDVIHYS 386
S D L K+++ENGG S N+ V+ + N + KY A KR D++
Sbjct: 708 RISKDDLQKLLLENGGKISHNI---VSKRESKSNLRILCGKYTAECNVLIKRGYDILSPQ 764
Query: 387 WVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLL-SNVDR 445
WV+DC KK+++++P + +SD VD++ D Y L ++ + +L S+ D
Sbjct: 765 WVIDCVENKKIVKIEPSHCFSVSDDLMALAMRRVDKYGDSYESLLSVSRLSYILRSSKDI 824
Query: 446 SED-----PKTIDYYKKKYCPQDKWSCFHGCCIYFYHSTEPLSPDWEVLLGLALRRLKLE 500
S D ++D+ K Y + F H+ + S +R L+
Sbjct: 825 SPDLLSPANMSLDFEKVPYFLFWRRKAF-----VMEHNFDKSS----------IRETILK 869
Query: 501 ISFHGGKVCNNLANATHVVV----LSVLGYDVNF--NSLTESF-TAREKHLLWNKKLHVV 553
I +GGKV N++ V+ ++V+ + F N+L ++ T+ E +L +V
Sbjct: 870 IQLYGGKVVKNISECNIVIFPKAEITVIRESMKFIRNTLAKTVSTSVELPML----PRIV 925
Query: 554 RSQWLEDCLAKEQKSEEYEY 573
+W++ + K + E +Y
Sbjct: 926 SFEWIDASIEKNVQVPEEDY 945
>gi|195358469|ref|XP_002045213.1| GM13668 [Drosophila sechellia]
gi|194123258|gb|EDW45301.1| GM13668 [Drosophila sechellia]
Length = 656
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 123/265 (46%), Gaps = 44/265 (16%)
Query: 33 ICVCVHVY-------------MLSQLRSQIMAADQTGEPCW----SLVAHNVDEVEKFFK 75
+ VCV+++ LS+ R ++ Q E W +L +++DEV++F +
Sbjct: 389 VQVCVYIFDLLYINGTALVTKNLSERRKLLLEHFQEVEGEWKFATALDTNDIDEVQQFLE 448
Query: 76 ETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIGGYYGSGRRG 132
E+I+ EG+++K L + +E RS WLKLK +Y+ G LD+++IGGY G GRR
Sbjct: 449 ESIKGNCEGLMVKTLDEEATYEIAKRSRNWLKLKKDYLSNVGDSLDLVVIGGYKGKGRRT 508
Query: 133 GEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDA--------VVTKLKPYFRKY 184
G FL+A DT + S C++GTG +DE+L V + K Y+R Y
Sbjct: 509 GTYGGFLLACY-----DTENEEYQSICKIGTGFTDEDLQTHSEFLGKHVTSAAKSYYR-Y 562
Query: 185 EYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRID 244
+ P P +++ + + SP + I R I SLRFPR
Sbjct: 563 D-PSLEPDHWFEPVQVWEVKCADLSLSPIHRAAIGIVDGERGI---------SLRFPRFI 612
Query: 245 RVRYDKPWHDCLDVQSFVELVHSSN 269
R+R DK + D + S +
Sbjct: 613 RIRDDKNSENATDANQVAHMYQSQD 637
>gi|195149365|ref|XP_002015628.1| GL11174 [Drosophila persimilis]
gi|194109475|gb|EDW31518.1| GL11174 [Drosophila persimilis]
Length = 744
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 122/268 (45%), Gaps = 54/268 (20%)
Query: 35 VCVHVY-------------MLSQLRSQIMAADQTGEPCW----SLVAHNVDEVEKFFKET 77
VCV+++ LS+ R ++ Q E W +L +++DEV++F +E+
Sbjct: 479 VCVYIFDLLYINGTTLVTSPLSERRKLLLEHFQEVEGEWKFATALDTNDIDEVQQFLEES 538
Query: 78 IENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIGGYYGSGRRGGE 134
++ EG+++K L + +E RS WLKLK +Y+ G LD+++IGGY G GRR G
Sbjct: 539 VKGNCEGLMVKTLDEEATYEIAKRSRNWLKLKKDYLSNVGDSLDLVVIGGYKGKGRRTGT 598
Query: 135 VAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDA--------VVTKLKPYFRKYEY 186
FL+A DT + S C++GTG +DE+L V+ K YFR
Sbjct: 599 YGGFLLACY-----DTENEEYQSICKIGTGFTDEDLRIHSEFLGKHVIPSAKSYFRY--- 650
Query: 187 PKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRSEVFSA-PYSLRFP 241
+S PD W E + K LS++ R V + SLRFP
Sbjct: 651 -------------DSSLEPDHWFEPAQVWEVKCADLSLSPIHRAAIGIVDTERGISLRFP 697
Query: 242 RIDRVRYDKPWHDCLDVQSFVELVHSSN 269
R R+R DK + D + S +
Sbjct: 698 RFIRIRDDKSSENATDANQVAHMYQSQD 725
>gi|195489363|ref|XP_002092706.1| GE14336 [Drosophila yakuba]
gi|194178807|gb|EDW92418.1| GE14336 [Drosophila yakuba]
Length = 747
Score = 99.4 bits (246), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 123/265 (46%), Gaps = 44/265 (16%)
Query: 33 ICVCVHVY-------------MLSQLRSQIMAADQTGEPCW----SLVAHNVDEVEKFFK 75
+ VCV+++ LS+ R ++ Q E W +L +++DEV++F +
Sbjct: 480 VQVCVYIFDLLYINGTALVTKNLSERRKLLLEHFQEVEGEWKFATALDTNDIDEVQQFLE 539
Query: 76 ETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIGGYYGSGRRG 132
E+I+ EG+++K L + +E RS WLKLK +Y+ G LD+++IGGY G GRR
Sbjct: 540 ESIKGNCEGLMVKTLDEEATYEIAKRSRNWLKLKKDYLSNVGDSLDLVVIGGYKGKGRRT 599
Query: 133 GEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDA--------VVTKLKPYFRKY 184
G FL+A DT + S C++GTG +DE+L V + K Y+R Y
Sbjct: 600 GTYGGFLLACY-----DTENEEYQSICKIGTGFTDEDLQTHSEFLGKHVTSTAKSYYR-Y 653
Query: 185 EYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRID 244
+ P P +++ + + SP + I R I SLRFPR
Sbjct: 654 D-PSLEPDHWFEPVQVWEVKCADLSLSPIHRAAIGIVDGERGI---------SLRFPRFI 703
Query: 245 RVRYDKPWHDCLDVQSFVELVHSSN 269
R+R DK + D + S +
Sbjct: 704 RIRDDKNSENATDANQVAHMYQSQD 728
>gi|15292189|gb|AAK93363.1| LD41868p [Drosophila melanogaster]
Length = 720
Score = 99.4 bits (246), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 122/263 (46%), Gaps = 44/263 (16%)
Query: 35 VCVHVY-------------MLSQLRSQIMAADQTGEPCW----SLVAHNVDEVEKFFKET 77
VCV+++ LS+ R ++ Q E W +L +++DEV++F +E+
Sbjct: 455 VCVYIFDLLYINGTALVTKNLSERRKLLLEHFQEVEGEWKFATALDTNDIDEVQQFLEES 514
Query: 78 IENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIGGYYGSGRRGGE 134
I+ EG+++K L + +E RS WLKLK +Y+ G LD+++IGGY G GRR G
Sbjct: 515 IKGNCEGLMVKTLDEEATYEIAKRSRNWLKLKKDYLSNVGDSLDLVVIGGYKGKGRRTGT 574
Query: 135 VAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDA--------VVTKLKPYFRKYEY 186
FL+A DT + S C++GTG +DE+L V + K Y+R Y+
Sbjct: 575 YGGFLLACY-----DTENEEYQSICKIGTGFTDEDLQTHSEFLGKHVTSAAKSYYR-YD- 627
Query: 187 PKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRV 246
P P +++ + + SP + I R I SLRFPR R+
Sbjct: 628 PSLEPDHWFEPVQVWEVKCADLSLSPIHRAAIGIVDGERGI---------SLRFPRFIRI 678
Query: 247 RYDKPWHDCLDVQSFVELVHSSN 269
R DK + D + S +
Sbjct: 679 RDDKNSENATDANQVAHMYQSQD 701
>gi|388579226|gb|EIM19552.1| ATP-dependent DNA ligase [Wallemia sebi CBS 633.66]
Length = 643
Score = 99.4 bits (246), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 112/207 (54%), Gaps = 30/207 (14%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLK-DLG-SKW-EPGDRSGKWLKLKPEYIRA-GSD 116
S+ A + +E++ F +E++++ EG+++K + G S W P RS WLKLK +Y+ G
Sbjct: 443 SMEAQSTEEIQAFLEESVKDSCEGLMVKMNQGESAWYTPSKRSMNWLKLKKDYLSGVGDS 502
Query: 117 LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTK 176
LD+++IGGYYG G+R +L+A ++ + + S C++GTG S+E LD+
Sbjct: 503 LDLVVIGGYYGKGKRTNVYGAYLLACYDQDS-----ESYQSICKIGTGFSEEMLDSHYKL 557
Query: 177 LKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP- 235
L P AP S+Y++ +PDV+ E +++ +T+D+ S V++A
Sbjct: 558 LNP------LEITAPKSYYKL---GSAKPDVYFEP--QAVWEVLTADLSL--SPVYTAAA 604
Query: 236 -------YSLRFPRIDRVRYDKPWHDC 255
SLRFPR RVR DK D
Sbjct: 605 GEISERGISLRFPRFIRVRDDKAADDA 631
>gi|302841420|ref|XP_002952255.1| hypothetical protein VOLCADRAFT_92808 [Volvox carteri f.
nagariensis]
gi|300262520|gb|EFJ46726.1| hypothetical protein VOLCADRAFT_92808 [Volvox carteri f.
nagariensis]
Length = 1534
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 100/201 (49%), Gaps = 12/201 (5%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVL 120
S + + + T +EG+V+K L + G R+ W+K+KP+Y+ G + D +
Sbjct: 554 SWTCSTAQQAQDVYDRTAAAGEEGVVVKALEEPYRLGCRTSTWIKIKPDYLTQG-EFDAV 612
Query: 121 IIGGYYGSGRRGGEVAQ-FLVALAERPAPDTYPRRFISFCRVGTGLSDEE-LDAVVTKLK 178
I+G Y V +L+ L E P +++F VGTG+S E+ L + +L
Sbjct: 613 ILGQLYDHTTSQVSVGGVYLLGLPEEQPQLGKPTTYVTFAVVGTGVSREQRLSLLEPRLA 672
Query: 179 ------PYFRKYEYPK---RAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRS 229
P P RA P + + T + E PD W+ PE+S+++ + +D+R R+
Sbjct: 673 GNLVASPRDLAAAGPAARLRAVPRWCRATGSRDEWPDWWVRDPERSVVVQVNADVRLTRT 732
Query: 230 EVFSAPYSLRFPRIDRVRYDK 250
F+A Y+ RFPRI R+R DK
Sbjct: 733 STFAAGYTTRFPRITRIRDDK 753
>gi|242008676|ref|XP_002425128.1| DNA ligase, putative [Pediculus humanus corporis]
gi|212508802|gb|EEB12390.1| DNA ligase, putative [Pediculus humanus corporis]
Length = 786
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 104/224 (46%), Gaps = 39/224 (17%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRA-GSDL 117
S+ ++EV++F +E+I+ EG+++K L + +E RS WLKLK +Y+ G L
Sbjct: 567 SIDTTKMEEVQEFLEESIKGNCEGLMVKTLREEATYEIAKRSKNWLKLKKDYLEGVGDTL 626
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D++++GGY G G+R G FL+ D + S C++GTG SDE L
Sbjct: 627 DLVVLGGYLGKGKRTGTYGGFLIGCY-----DNDNEEYQSICKLGTGFSDESLAQHTEFF 681
Query: 178 KPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIE--------------SPEKSIILSITSD 223
KP+ PS+YQ ++ PD W E SP + +
Sbjct: 682 KPHVI------TQAPSYYQY--DTSMEPDHWFEPIQVWETKCADFSLSPIHRAAVGVVDP 733
Query: 224 IRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 267
++ I SLRFPR R+R DK D Q ++L H+
Sbjct: 734 VKGI---------SLRFPRFLRIRDDKKPEDATTAQQIIDLYHN 768
>gi|113913529|gb|ABI48908.1| LIG4 [Saccharomyces pastorianus]
Length = 937
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 103/414 (24%), Positives = 177/414 (42%), Gaps = 59/414 (14%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLII 122
++ + V+K + I EG+VLK S + R+ W+K+KPEY+ G +LD++II
Sbjct: 423 CYDAESVKKALEVAISLGSEGVVLKHYNSGYNVASRNNNWIKVKPEYLEEFGENLDLIII 482
Query: 123 GGYYGSGRRGGEVAQFLV--------------------ALAERPA--PDTYPRRFISFCR 160
G SG++ + LV + E+P P ++ +SFC
Sbjct: 483 GR--DSGKKDSFILGLLVVDEQETAKTDQEGSPEILNDSSVEQPVKNPKMSVKKVLSFCS 540
Query: 161 VGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSI 220
+ G+S EE + K + +++K PPS + + P WIE P +SI+L I
Sbjct: 541 IANGISQEEFKEIDRKTRGHWKKTS--GFCPPS--SILEFGSKTPAEWIE-PSESIVLEI 595
Query: 221 TS---DIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKE 277
S D + ++ +L R+RYDK W DC + E N T+
Sbjct: 596 KSRSLDNTETNMQKYATNCTLYGGYCRRIRYDKEWTDCYTLDDLYE-----NRRTKSNPS 650
Query: 278 YGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFY----FVNVP 333
+ + + + +K+ +V F Q+ + K + IF + FY ++N
Sbjct: 651 H------QVENLQLQLVSKKRKRVLVSDPFHQS--REQKPISDIFDGLFFYVLSDYINSV 702
Query: 334 PAYSLD--SLHKMVVENGGTFSMNLNNSVTHCVA-ADNKGLKY----EAAKRRG-DVIHY 385
+ L +V++GG N+ HC+ G K +A RG D++H
Sbjct: 703 TGVRITRAELDDDIVKHGGKLIHNVILK-RHCIGEVRLIGCKITGECKALIDRGYDILHP 761
Query: 386 SWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQL 439
W++DC + KKLL ++P Y +S+ + VD D + D+ + + L
Sbjct: 762 RWIMDCTAYKKLLPIEPSYCFSVSEKLRAVATRRVDCVGDSFENDISESKLSSL 815
>gi|395334355|gb|EJF66731.1| ATP-dependent DNA ligase [Dichomitus squalens LYAD-421 SS1]
Length = 834
Score = 99.0 bits (245), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 107/213 (50%), Gaps = 30/213 (14%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDV 119
A VDE++ F +E++++ EG+++K L S ++P R+ WLKLK +Y+ G LD+
Sbjct: 615 AETVDEIQTFLEESVKDGCEGLMVKMLEGEFSHYQPSRRTVNWLKLKKDYLAGVGDSLDL 674
Query: 120 LIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 179
+++GGY+G G+R FL+A D + + C++GTG SDE L A LKP
Sbjct: 675 VVVGGYFGKGKRTNVYGAFLLACY-----DADAEEYQTICKIGTGFSDEALQAHYETLKP 729
Query: 180 YFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP---- 235
AP ++ +PDVW E K + +T+D+ S +++A
Sbjct: 730 ------LEVHAPRGDIKIGG---AKPDVWFEP--KVVWEVLTADLSL--SPIYTAAQGLV 776
Query: 236 ----YSLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
SLRFPR ++R DK D + E+
Sbjct: 777 EERGISLRFPRFIKIREDKDADDATGPEQIAEM 809
>gi|388582574|gb|EIM22878.1| ATP-dependent DNA ligase [Wallemia sebi CBS 633.66]
Length = 1135
Score = 99.0 bits (245), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 70/193 (36%), Positives = 103/193 (53%), Gaps = 19/193 (9%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDL-DVLII 122
A DE+++ + I ++ EG+V+K S +E G RS +W+KLKP+Y S+ D+L+I
Sbjct: 385 ATQADELKQSLERIIISKGEGLVVKSPLSLYEYGGRSDQWIKLKPDYFDEMSETADLLVI 444
Query: 123 GGYYGSGRRGGEVAQFLVALA----ERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLK 178
GG + S R G ++ AL E PD F++F RVGTG + +L+ +
Sbjct: 445 GGNW-SASRNGTISTLYCALVDDRHETDEPD-----FLTFTRVGTGYTAMDLELI----N 494
Query: 179 PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSI-TSDIRTIRSEVFSAPYS 237
+FRK E K P S Y E PD+ I+ P+ S ++ I SDI RS + Y+
Sbjct: 495 QHFRKSETRKYTPASVYPGIEIGNETPDIIID-PKDSFVVEIKASDIN--RSVNYPCGYT 551
Query: 238 LRFPRIDRVRYDK 250
RFPR R+R DK
Sbjct: 552 YRFPRFKRLRLDK 564
>gi|221060727|ref|XP_002261933.1| DNA ligase 1 [Plasmodium knowlesi strain H]
gi|193811083|emb|CAQ41811.1| DNA ligase 1, putative [Plasmodium knowlesi strain H]
Length = 924
Score = 99.0 bits (245), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 74/224 (33%), Positives = 116/224 (51%), Gaps = 33/224 (14%)
Query: 56 GEPCWSLVA--HNVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYI 111
G C++ + +NV++++ F ++ IEN EG+++K L + +EP RS WLK+K +YI
Sbjct: 698 GVLCYATHSEMNNVEDMDIFLQDAIENNCEGLMVKTLLDNASYEPSRRSLNWLKVKKDYI 757
Query: 112 RAGSD-LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEEL 170
SD +D++ I GYYG G+R G F++A ++ F + C+ GTG SDE L
Sbjct: 758 EGLSDSVDLVPIAGYYGKGKRSGVYGAFVLA-----TYNSETENFQTVCKAGTGFSDEIL 812
Query: 171 ----DAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIES----PEKSIILSITS 222
D + K+ P + S+Y+V++ K PDVW ++ K+ LS+ S
Sbjct: 813 GSLYDTLSDKIIP----------SKKSYYEVSD--KLNPDVWFDAHYVWEVKAADLSL-S 859
Query: 223 DIRTIRSEVFS--APYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
+ T V+S LRFPR R+R DK Q V+L
Sbjct: 860 PVHTAAIGVYSDDKGIGLRFPRFLRLREDKNAEQATTSQQIVDL 903
>gi|407462665|ref|YP_006773982.1| ATP-dependent DNA ligase I [Candidatus Nitrosopumilus koreensis
AR1]
gi|407046287|gb|AFS81040.1| ATP-dependent DNA ligase I [Candidatus Nitrosopumilus koreensis
AR1]
Length = 588
Score = 99.0 bits (245), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 103/202 (50%), Gaps = 26/202 (12%)
Query: 63 VAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLI 121
+ N +++E FF+ +I EG++LK L ++ G R WLKLK EY G LD+++
Sbjct: 381 IVKNENDIEDFFENSINAGSEGLMLKMLDKPYQAGSRGSHWLKLKREYQNELGDSLDLVV 440
Query: 122 IGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYF 181
IGG++G GRR G L+A E DT F S C+VGTG SDE+LD + L P
Sbjct: 441 IGGFFGKGRRTGSYGTLLLATYEED-EDT----FTSICKVGTGFSDEDLDQLYQILNPKV 495
Query: 182 RKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDI------RTIRSEVF-SA 234
+ P+ +S+ DVW E PE +I + S+I + R +V A
Sbjct: 496 TIKKNPRI----------DSEMEADVWFE-PE-LVIEVVASEITLSPIHKAARDKVRKGA 543
Query: 235 PYSLRFPRI-DRVRYDKPWHDC 255
+LRFP+ ++R +K D
Sbjct: 544 GLALRFPKFTGKIRVEKMAEDA 565
>gi|328719935|ref|XP_001943404.2| PREDICTED: DNA ligase 1-like [Acyrthosiphon pisum]
Length = 843
Score = 99.0 bits (245), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 120/246 (48%), Gaps = 26/246 (10%)
Query: 45 LRSQIMAADQTGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGK 102
LR + ++ SL ++EV+ F +E+I+ EG+++K L + +E RS
Sbjct: 608 LRENFIEVEEQFLLATSLDTTKMEEVQDFLEESIKGNCEGLMVKTLEEEATYEIAKRSRN 667
Query: 103 WLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRV 161
WLKLK +Y+ G +DV+++GGY G G+R G FL+A + PD+ + S C++
Sbjct: 668 WLKLKKDYLDGVGDTIDVVVLGGYLGRGKRTGTYGGFLLACYD---PDS--EEYQSICKI 722
Query: 162 GTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSII 217
GTG SDE+L +F+++ P S+Y+ + PD W E+ + K
Sbjct: 723 GTGFSDEDLQTHTE----FFQQHII--DGPKSYYRF--DQSHEPDHWFETVQVWEIKCAD 774
Query: 218 LSITSDIRTIRSEV-FSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS-----SNGT 271
LS++ R V SLRFPR R+R DK Q EL +S + G+
Sbjct: 775 LSLSPVHRAALGIVDPEKGISLRFPRFLRIREDKSIEQSTSAQQIAELYYSQVQIINQGS 834
Query: 272 TQKGKE 277
T +E
Sbjct: 835 TNTNRE 840
>gi|409083536|gb|EKM83893.1| hypothetical protein AGABI1DRAFT_51454 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 822
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 113/213 (53%), Gaps = 30/213 (14%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDV 119
+ +V+E++ F +E++++ EG+++K L S +EP RS WLKLK +Y+ G LD+
Sbjct: 606 SQSVEEIQAFLEESVKDGCEGLMVKMLDGEPSFYEPSRRSVNWLKLKKDYLAGVGDSLDL 665
Query: 120 LIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 179
+++GGYYG G+R FL+A + PD+ + + C++GTG SDE L + +LKP
Sbjct: 666 VVVGGYYGKGKRTNVYGAFLLACFD---PDS--EEYQTICKIGTGFSDEILQSHYNELKP 720
Query: 180 YFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPY--- 236
+ E + N +PD+W E K + +T+D+ S +++A +
Sbjct: 721 L--ELEKARGD-------VNIGGAKPDIWFEP--KIVWEVLTADLSL--SPIYTAAHGTV 767
Query: 237 -----SLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
SLRFPR RVR DK D + E+
Sbjct: 768 DERGISLRFPRFIRVRDDKHVEDATASEQVAEM 800
>gi|195347251|ref|XP_002040167.1| GM16058 [Drosophila sechellia]
gi|194135516|gb|EDW57032.1| GM16058 [Drosophila sechellia]
Length = 747
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 123/265 (46%), Gaps = 44/265 (16%)
Query: 33 ICVCVHVY-------------MLSQLRSQIMAADQTGEPCW----SLVAHNVDEVEKFFK 75
+ VCV+++ LS+ R ++ Q E W +L +++DEV++F +
Sbjct: 480 VQVCVYIFDLLYINGTALVTKNLSERRKLLLEHFQEVEGEWKFATALDTNDIDEVQQFLE 539
Query: 76 ETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIGGYYGSGRRG 132
E+I+ EG+++K L + +E RS WLKLK +Y+ G LD+++IGGY G GRR
Sbjct: 540 ESIKGNCEGLMVKTLDEEATYEIAKRSRNWLKLKKDYLSNVGDSLDLVVIGGYKGKGRRT 599
Query: 133 GEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDA--------VVTKLKPYFRKY 184
G FL+A DT + S C++GTG +DE+L V + K Y+R Y
Sbjct: 600 GTYGGFLLACY-----DTENEEYQSICKIGTGFTDEDLQTHSEFLGKHVTSAAKSYYR-Y 653
Query: 185 EYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRID 244
+ P P +++ + + SP + I R I SLRFPR
Sbjct: 654 D-PSLEPDHWFEPVQVWEVKCADLSLSPIHRAAIGIVDGERGI---------SLRFPRFI 703
Query: 245 RVRYDKPWHDCLDVQSFVELVHSSN 269
R+R DK + D + S +
Sbjct: 704 RIRDDKNSENATDANQVAHMYQSQD 728
>gi|195122766|ref|XP_002005882.1| GI20719 [Drosophila mojavensis]
gi|193910950|gb|EDW09817.1| GI20719 [Drosophila mojavensis]
Length = 736
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/267 (31%), Positives = 123/267 (46%), Gaps = 55/267 (20%)
Query: 35 VCVHVY-------------MLSQLRSQIMAADQTGEPCW----SLVAHNVDEVEKFFKET 77
VCV+++ LS+ R +M Q E W +L ++DEV++F +E+
Sbjct: 471 VCVYIFDLLYFNGVSLVTKPLSERRKILMEHFQEVEGEWQFATALDTTDMDEVQQFLEES 530
Query: 78 IENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIGGYYGSGRRGGE 134
I+ EG+++K L + +E RS WLKLK +Y+ G LD+++IGGY G GRR G
Sbjct: 531 IKGNCEGLMVKTLDEEATYEIAKRSRNWLKLKKDYLSNVGDSLDLVVIGGYKGKGRRTGI 590
Query: 135 VAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDA--------VVTKLKPYFRKYEY 186
FL+A DT + S C++GTG +DE+L V++ K YFR Y+
Sbjct: 591 YGGFLLACY-----DTENEEYQSICKIGTGFTDEDLRQHSEFLSAHVISSAKSYFR-YD- 643
Query: 187 PKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA-----PYSLRFP 241
PS PD W E + + + I A SLRFP
Sbjct: 644 -----PSL---------EPDAWFEPVQVWEVKCADLSLSPIHRAAIGAVDPERGISLRFP 689
Query: 242 RIDRVRYDKPWHDCLDVQSFVELVHSS 268
R R+R DK + D V L+++S
Sbjct: 690 RFIRIRDDKSPENATDANQ-VSLMYNS 715
>gi|297849114|ref|XP_002892438.1| ATLIG1 [Arabidopsis lyrata subsp. lyrata]
gi|297338280|gb|EFH68697.1| ATLIG1 [Arabidopsis lyrata subsp. lyrata]
Length = 793
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 107/215 (49%), Gaps = 21/215 (9%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLKDLGS--KWEPGDRSGKWLKLKPEYIRA-GSDL 117
+L + ++DE++KF +++ EG+++K L S +EP RS WLKLK +Y+ + G +
Sbjct: 577 ALTSSDIDEIQKFLDASVDVGCEGLIIKTLNSDATYEPAKRSNNWLKLKKDYMDSIGDSM 636
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D++ I ++G G+R G FL+A D F S C++GTG SD LD + L
Sbjct: 637 DLVPIAAFHGRGKRTGVYGAFLLACY-----DVDKEEFQSICKIGTGFSDAMLDERSSSL 691
Query: 178 KPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRSEV-F 232
+ P +Y+V ++ PDVW E E K+ L+I+ R V
Sbjct: 692 RSQVIA------TPKQYYRVGDSLN--PDVWFEPTEVWEVKAADLTISPVHRAATGIVDP 743
Query: 233 SAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 267
SLRFPR+ RVR DK D + ++ +
Sbjct: 744 DKGISLRFPRLLRVREDKKPEDATSSEQIADMYQA 778
>gi|24762424|ref|NP_611843.2| DNA ligase I [Drosophila melanogaster]
gi|75027832|sp|Q9W1H4.2|DNLI1_DROME RecName: Full=DNA ligase 1; AltName: Full=DNA ligase I; Short=DmDNA
Lig I
gi|23240139|gb|AAF47090.3| DNA ligase I [Drosophila melanogaster]
gi|54650818|gb|AAV36988.1| LD20955p [Drosophila melanogaster]
Length = 747
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 123/265 (46%), Gaps = 44/265 (16%)
Query: 33 ICVCVHVY-------------MLSQLRSQIMAADQTGEPCW----SLVAHNVDEVEKFFK 75
+ VCV+++ LS+ R ++ Q E W +L +++DEV++F +
Sbjct: 480 VQVCVYIFDLLYINGTALVTKNLSERRKLLLEHFQEVEGEWKFATALDTNDIDEVQQFLE 539
Query: 76 ETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIGGYYGSGRRG 132
E+I+ EG+++K L + +E RS WLKLK +Y+ G LD+++IGGY G GRR
Sbjct: 540 ESIKGNCEGLMVKTLDEEATYEIAKRSRNWLKLKKDYLSNVGDSLDLVVIGGYKGKGRRT 599
Query: 133 GEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDA--------VVTKLKPYFRKY 184
G FL+A DT + S C++GTG +DE+L V + K Y+R Y
Sbjct: 600 GTYGGFLLACY-----DTENEEYQSICKIGTGFTDEDLQTHSEFLGKHVTSAAKSYYR-Y 653
Query: 185 EYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRID 244
+ P P +++ + + SP + I R I SLRFPR
Sbjct: 654 D-PSLEPDHWFEPVQVWEVKCADLSLSPIHRAAIGIVDGERGI---------SLRFPRFI 703
Query: 245 RVRYDKPWHDCLDVQSFVELVHSSN 269
R+R DK + D + S +
Sbjct: 704 RIRDDKNSENATDANQVAHMYQSQD 728
>gi|367011607|ref|XP_003680304.1| hypothetical protein TDEL_0C02040 [Torulaspora delbrueckii]
gi|359747963|emb|CCE91093.1| hypothetical protein TDEL_0C02040 [Torulaspora delbrueckii]
Length = 705
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 106/210 (50%), Gaps = 20/210 (9%)
Query: 62 LVAHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDL 117
L +V+E++KF +++++ EG+++K L S +EP RS WLKLK +Y+ G L
Sbjct: 501 LTTSSVEELQKFLDQSVKDSCEGLMVKMLDGPESHYEPSKRSRNWLKLKKDYLDGVGDSL 560
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D+ ++G YYG G+R G FL+ + + + F + C++GTG SDE L +
Sbjct: 561 DLCVLGAYYGRGKRTGTYGGFLLGCYNQDSGE-----FETCCKIGTGFSDEMLQQL---- 611
Query: 178 KPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSI---TSDIRTIRSEVFSA 234
Y R + P + Y V ++S E PDVW E +L+ S + + +
Sbjct: 612 --YERFSKTTLDGPKATY-VFDSSAE-PDVWFEPTTLFEVLTADLSLSPVYKAGASTYDK 667
Query: 235 PYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
SLRFPR R+R DK D VEL
Sbjct: 668 GVSLRFPRFVRLRDDKSVEDATSSAQIVEL 697
>gi|426201422|gb|EKV51345.1| hypothetical protein AGABI2DRAFT_214235 [Agaricus bisporus var.
bisporus H97]
Length = 822
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 113/213 (53%), Gaps = 30/213 (14%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDV 119
+ +V+E++ F +E++++ EG+++K L S +EP RS WLKLK +Y+ G LD+
Sbjct: 606 SQSVEEIQAFLEESVKDGCEGLMVKMLDGEPSFYEPSRRSVNWLKLKKDYLAGVGDSLDL 665
Query: 120 LIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 179
+++GGYYG G+R FL+A + PD+ + + C++GTG SDE L + +LKP
Sbjct: 666 VVVGGYYGKGKRTNVYGAFLLACFD---PDS--EEYQTICKIGTGFSDEILQSHYNELKP 720
Query: 180 YFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPY--- 236
+ E + N +PD+W E K + +T+D+ S +++A +
Sbjct: 721 L--ELEKARGD-------VNIGGAKPDIWFEP--KIVWEVLTADLSL--SPIYTAAHGTV 767
Query: 237 -----SLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
SLRFPR RVR DK D + E+
Sbjct: 768 DERGISLRFPRFIRVRDDKHVEDATASEQVAEM 800
>gi|170083931|ref|XP_001873189.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650741|gb|EDR14981.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 816
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 114/232 (49%), Gaps = 41/232 (17%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDL---GSKWEPGDRSGKWLKLKPEYIRA-GSDLDV 119
+ +E++ F +E++++ EG+++K L S +EP RS WLKLK +Y+ G LD+
Sbjct: 598 SETTEEIQTFLEESVKDGCEGLMVKMLDSDASYYEPSRRSVNWLKLKKDYLAGVGDSLDL 657
Query: 120 LIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 179
+++GGYYG G+R FL+A D+ + + C++GTG S+E L A LKP
Sbjct: 658 VVVGGYYGKGKRTNVYGAFLLACY-----DSESEEYQTICKIGTGFSEENLQAHYDALKP 712
Query: 180 YFRKYEYPKRAPPSFYQVTNNSK---ERPDVWIESPEKSIILSITSDIRTIRSEVFSAP- 235
+V + K +PD+W E K + +T+D+ S +++A
Sbjct: 713 L------------ETTKVRGDIKVGGAKPDIWFEP--KIVWEVLTADLSL--SPIYTAAQ 756
Query: 236 -------YSLRFPRIDRVRYDKPWHDCLDVQSFVEL-----VHSSNGTTQKG 275
SLRFPR RVR DK D + E+ + SNG +KG
Sbjct: 757 GLVEDRGISLRFPRFIRVRDDKGPDDATGPEQIAEMYERQALAQSNGKKKKG 808
>gi|198456070|ref|XP_001360228.2| GA18999 [Drosophila pseudoobscura pseudoobscura]
gi|198135509|gb|EAL24802.2| GA18999 [Drosophila pseudoobscura pseudoobscura]
Length = 744
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 122/268 (45%), Gaps = 54/268 (20%)
Query: 35 VCVHVY-------------MLSQLRSQIMAADQTGEPCW----SLVAHNVDEVEKFFKET 77
VCV+++ LS+ R ++ Q E W +L +++DEV++F +E+
Sbjct: 479 VCVYIFDLLYINGTTLVTSPLSERRKLLLEHFQEVEGEWKFATALDTNDMDEVQQFLEES 538
Query: 78 IENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIGGYYGSGRRGGE 134
++ EG+++K L + +E RS WLKLK +Y+ G LD+++IGGY G GRR G
Sbjct: 539 VKGNCEGLMVKTLDEEATYEIAKRSRNWLKLKKDYLSNVGDSLDLVVIGGYKGKGRRTGT 598
Query: 135 VAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDA--------VVTKLKPYFRKYEY 186
FL+A DT + S C++GTG +DE+L V+ K YFR
Sbjct: 599 YGGFLLACY-----DTENEEYQSICKIGTGFTDEDLRIHSEFLGKHVIPSAKSYFRY--- 650
Query: 187 PKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRSEVFSA-PYSLRFP 241
+S PD W E + K LS++ R V + SLRFP
Sbjct: 651 -------------DSSLEPDHWFEPAQVWEVKCADLSLSPIHRAAIGIVDTERGISLRFP 697
Query: 242 RIDRVRYDKPWHDCLDVQSFVELVHSSN 269
R R+R DK + D + S +
Sbjct: 698 RFIRIRDDKSSENATDANQVAHMYQSQD 725
>gi|195586207|ref|XP_002082869.1| GD11806 [Drosophila simulans]
gi|194194878|gb|EDX08454.1| GD11806 [Drosophila simulans]
Length = 713
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 123/265 (46%), Gaps = 44/265 (16%)
Query: 33 ICVCVHVY-------------MLSQLRSQIMAADQTGEPCW----SLVAHNVDEVEKFFK 75
+ VCV+++ LS+ R ++ Q E W +L +++DEV++F +
Sbjct: 446 VQVCVYIFDLLYINGTALVTKNLSERRKLLLEHFQEVEGEWKFATALDTNDIDEVQQFLE 505
Query: 76 ETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIGGYYGSGRRG 132
E+I+ EG+++K L + +E RS WLKLK +Y+ G LD+++IGGY G GRR
Sbjct: 506 ESIKGNCEGLMVKTLDEEATYEIAKRSRNWLKLKKDYLSNVGDSLDLVVIGGYKGKGRRT 565
Query: 133 GEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDA--------VVTKLKPYFRKY 184
G FL+A DT + S C++GTG +DE+L V + K Y+R Y
Sbjct: 566 GTYGGFLLACY-----DTENEEYQSICKIGTGFTDEDLQTHSEFLGKHVTSAAKSYYR-Y 619
Query: 185 EYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRID 244
+ P P +++ + + SP + I R I SLRFPR
Sbjct: 620 D-PSLEPDHWFEPVQVWEVKCADLSLSPIHRAAIGIVDGERGI---------SLRFPRFI 669
Query: 245 RVRYDKPWHDCLDVQSFVELVHSSN 269
R+R DK + D + S +
Sbjct: 670 RIRDDKNSENATDANQVAHMYQSQD 694
>gi|326437875|gb|EGD83445.1| DNA ligase 1 [Salpingoeca sp. ATCC 50818]
Length = 1207
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 116/223 (52%), Gaps = 27/223 (12%)
Query: 62 LVAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRA-GSDLD 118
LV + DE+ F +++I++ EG+++K L + +E RS WLKLK +Y+ G LD
Sbjct: 991 LVTSDTDEIGMFLEQSIKDSCEGLMIKTLTEDASYEIARRSHSWLKLKKDYLEGVGDTLD 1050
Query: 119 VLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLK 178
+++IGG+ G G+R G FL+A D + S C++GTG SDE+L +LK
Sbjct: 1051 LVVIGGWLGKGKRTGTYGAFLLACY-----DEESEEYQSICKIGTGFSDEDLKTHFEQLK 1105
Query: 179 PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRSEVFSA 234
P+ P +P ++Y+ +S PD W ++ + K+ LSI+ + V +
Sbjct: 1106 PHV----IP--SPRNYYRY--DSTLAPDHWFDAAQVWEVKAADLSISPRHKAAAGLVDAE 1157
Query: 235 P-YSLRFPRIDRVRYDK------PWHDCLDVQSFVELVHSSNG 270
SLRFPR RVR DK + D+ + +LV +S G
Sbjct: 1158 KGISLRFPRFIRVRDDKKPDMATSAYQVADMYNSQDLVQNSRG 1200
>gi|156102559|ref|XP_001616972.1| DNA ligase 1 precursor [Plasmodium vivax Sal-1]
gi|148805846|gb|EDL47245.1| DNA ligase 1 precursor, putative [Plasmodium vivax]
Length = 933
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 114/223 (51%), Gaps = 23/223 (10%)
Query: 65 HNVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLI 121
+N+++++ F ++ IEN EG+++K L + +EP RS WLK+K +YI SD +D++
Sbjct: 718 NNIEDIDIFLQDAIENNCEGLMVKTLLDNASYEPSRRSLNWLKVKKDYIEGLSDSVDLVP 777
Query: 122 IGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYF 181
I GYYG G+R G F++A ++ F + C+ GTG SDE L ++ L
Sbjct: 778 IAGYYGKGKRSGVYGAFVLA-----TYNSETENFQTVCKAGTGFSDEVLGSLYETLSDKI 832
Query: 182 RKYEYPKRAPPSFYQVTNNSKERPDVWIES----PEKSIILSITSDIRTIRSEVFS--AP 235
P + S+Y+V++ K PDVW ++ K+ LS+ S + T V+S
Sbjct: 833 ----IPNKK--SYYEVSD--KLNPDVWFDAHYVWEVKAADLSL-SPVHTAAIGVYSDDKG 883
Query: 236 YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEY 278
LRFPR R+R DK Q V+ + + + +Y
Sbjct: 884 IGLRFPRFLRLREDKNAEQATTSQQIVDFYEAQFTSNKNKNDY 926
>gi|224106842|ref|XP_002314303.1| predicted protein [Populus trichocarpa]
gi|222850711|gb|EEE88258.1| predicted protein [Populus trichocarpa]
Length = 684
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 108/198 (54%), Gaps = 21/198 (10%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRA-GSDL 117
++ +++++E++KF ++ EG+++K + + +EP RS WLKLK +Y+ + G L
Sbjct: 467 AITSNDLEEIQKFLDTAVDASCEGLIIKTMNKDATYEPSRRSHNWLKLKKDYMESIGDSL 526
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D++ IG ++G G+R G FL+A ++ F S C++GTG S++ L+ L
Sbjct: 527 DLVPIGAFHGRGKRTGVYGAFLLACY-----NSNNEEFQSICKIGTGFSEQVLEERSASL 581
Query: 178 KPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRSEV-F 232
R PK P S+Y+ + K PDVW E E K+ L+I+ R EV
Sbjct: 582 ----RSQVIPK--PKSYYRFGDTIK--PDVWFEPKEVWEVKAADLTISPVHRAAIGEVDP 633
Query: 233 SAPYSLRFPRIDRVRYDK 250
+ SLRFPR+ RVR DK
Sbjct: 634 NKGISLRFPRLVRVREDK 651
>gi|443918397|gb|ELU38877.1| DNA ligase I [Rhizoctonia solani AG-1 IA]
Length = 1084
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 109/227 (48%), Gaps = 21/227 (9%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDL---GSKWEPGDRSGKWLKLKPEYIRAGSDLDVL 120
+E++ F +E++++ EG+++K L S++EP RS WLK+ G LD++
Sbjct: 871 GETTEEIQVFLEESVKDGCEGLMVKTLTGDASRYEPSRRSVNWLKVGNYLAGIGDSLDLV 930
Query: 121 IIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPY 180
++G YYG G+R FL+A + PD + + C++GTG SDE L A +L+P
Sbjct: 931 VVGAYYGKGKRTKVYGAFLLACYD---PDA--EEYQTICKIGTGFSDEALAAHYAQLQP- 984
Query: 181 FRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRF 240
E PK P ++ +PD+W E +L+ + + V SLRF
Sbjct: 985 ---LEQPK--PWGNVKIGGA---KPDIWFEPKVVWEVLTADLSLSPVYEAVDDRGISLRF 1036
Query: 241 PRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKG---KEYGGLQDD 284
PR RVR DK D + E+ + Q G K+ GG DD
Sbjct: 1037 PRFIRVRDDKSADDATEPSQIAEM-YERQSLAQNGPGKKKRGGEDDD 1082
>gi|448516161|ref|XP_003867506.1| Cdc9 protein [Candida orthopsilosis Co 90-125]
gi|380351845|emb|CCG22069.1| Cdc9 protein [Candida orthopsilosis]
Length = 760
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 107/212 (50%), Gaps = 28/212 (13%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDL-GSK--WEPGDRSGKWLKLKPEYIRA-GSDLDVLI 121
+++ +++F +++ + EG+++K L GS+ +EP RS WLKLK +Y+ G LD+++
Sbjct: 555 SLEVLQQFLDQSVHDSCEGLMVKMLEGSESYYEPSKRSRNWLKLKKDYLAGVGDSLDLVV 614
Query: 122 IGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYF 181
IG Y G G+R G FL+A + D + C++GTG SDE L + KL P
Sbjct: 615 IGAYNGKGKRTGTYGGFLLATYNQDTGD-----LETTCKIGTGFSDEMLTQLYQKLHP-- 667
Query: 182 RKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPY----- 236
E P R F NS PDVW E + +T+D+ S ++ A +
Sbjct: 668 --SEIP-RPKEYFVYDKTNSNAVPDVWFEP--TMLFEVLTADLSL--SPIYKAAHNEYGK 720
Query: 237 --SLRFPRIDRVRYDKPWHDC---LDVQSFVE 263
SLRFPR R+R DK D DV F E
Sbjct: 721 GISLRFPRFLRIRDDKAIEDATSSTDVAEFYE 752
>gi|124512824|ref|XP_001349768.1| DNA ligase I [Plasmodium falciparum 3D7]
gi|23615185|emb|CAD52175.1| DNA ligase I [Plasmodium falciparum 3D7]
gi|23683342|gb|AAL59668.2| DNA ligase 1 [Plasmodium falciparum]
gi|24935322|gb|AAN64156.1| DNA ligase 1 precursor [Plasmodium falciparum]
Length = 912
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 106/217 (48%), Gaps = 39/217 (17%)
Query: 65 HNVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLI 121
+N+++++ F ++ IEN EG+++K L + +EP RS WLK+K +Y+ SD +D++
Sbjct: 696 NNIEDIDMFLQDAIENNCEGLMVKTLVENASYEPSRRSLNWLKVKKDYVEGLSDSVDLVP 755
Query: 122 IGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYF 181
I GYYG G+R G F++A A ++ F + C+ GTG SDE L + L
Sbjct: 756 IAGYYGKGKRSGVYGAFVLA-----AYNSETENFQTVCKAGTGFSDEILSTLYETLSEKI 810
Query: 182 RKYEYPKRAPPSFYQVTNNSKERPDVWIE--------------SPEKSIILSITSDIRTI 227
P + S+Y+V++ K PDVW + SP + + I +D + I
Sbjct: 811 ----IPNKK--SYYEVSD--KLNPDVWFDAHYVWEVKAADLSLSPVHTAAIGIYADDKGI 862
Query: 228 RSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
LRFPR R+R DK Q V+
Sbjct: 863 ---------GLRFPRFLRLREDKNAEQATTTQQIVDF 890
>gi|303276855|ref|XP_003057721.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460378|gb|EEH57672.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 682
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 102/194 (52%), Gaps = 19/194 (9%)
Query: 63 VAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLI 121
V+ +V+E++ F +++I+ EG+++K L + +EP RS WLKLK +Y+ G LD++
Sbjct: 469 VSRDVEELQVFLEDSIKENTEGLIVKTLDATYEPSKRSLNWLKLKKDYMEGCGDSLDLVP 528
Query: 122 IGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYF 181
IG ++G G+R G +L+A D S C++GTG SDE L+++ LK
Sbjct: 529 IGAFHGRGKRTGVYGAYLLACY-----DEESEELQSICKIGTGFSDEALESLSNSLK--- 580
Query: 182 RKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRSEVFSAP-Y 236
+ AP +Y+ + PDVW + + K+ LSI+ V S
Sbjct: 581 ---DTVIDAPRGYYKYGESVA--PDVWFAASQVWEVKAADLSISPTHMAAHGLVDSTKGI 635
Query: 237 SLRFPRIDRVRYDK 250
+LRFPR RVR DK
Sbjct: 636 ALRFPRFLRVREDK 649
>gi|358058971|dbj|GAA95369.1| hypothetical protein E5Q_02023.4 [Mixia osmundae IAM 14324]
Length = 871
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 116/226 (51%), Gaps = 33/226 (14%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDL---GSKWEPGDRSGKWLKLKPEYIRA-GSDLDV 119
A +V+ ++ F E+I+ EG+++K L G+ +EP RS WLK+K +Y++ G D+
Sbjct: 657 ASDVEHIQAFLDESIKQGCEGLMVKMLHGQGAYYEPSRRSMNWLKVKKDYLQGVGDSFDL 716
Query: 120 LIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 179
+IGGY+G G+R FL+A + PD+ + + C++GTG S+E LD+ T LKP
Sbjct: 717 TVIGGYHGRGKRTAVYGAFLLACYD---PDS--ESYQAVCKLGTGFSEEALDSHYTVLKP 771
Query: 180 YFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP---- 235
+E KR +Y+V + PDV+ E + + + +D+ S V++A
Sbjct: 772 ----HECGKRG---YYEVGTAT---PDVYFEP--RVVWEVLAADLSL--SPVYTAAREQL 817
Query: 236 -----YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGK 276
SLRFPR R+R DK D F+ + T GK
Sbjct: 818 GGERGVSLRFPRFIRIRDDKGVEDS-TTPEFIAEAYQRQAVTVNGK 862
>gi|328352626|emb|CCA39024.1| DNA ligase 1 [Komagataella pastoris CBS 7435]
Length = 1087
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 101/208 (48%), Gaps = 22/208 (10%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDV 119
A NV E++ F +++++ EG+++K L S +EP RS WLKLK +Y+ G LD+
Sbjct: 888 ADNVAEIQHFLDQSVKDSCEGLMVKMLDGDKSHYEPSKRSVNWLKLKKDYLEGVGDSLDL 947
Query: 120 LIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 179
++GGY G G+R G FL+A + + + + C++GTG S+E L + LKP
Sbjct: 948 AVVGGYIGKGKRTGWYGGFLLACYNEDSGE-----YETCCKIGTGFSEEMLQTLSGTLKP 1002
Query: 180 YFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSI---TSDIRTIRSEVFSAPY 236
+ P FY V + S PDVW E +L+ S + F
Sbjct: 1003 TV------IQQPKPFY-VYDAS---PDVWFEPTLVFEVLTADLSLSPVYKAGINFFGKGV 1052
Query: 237 SLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
SLRFPR RVR DK VEL
Sbjct: 1053 SLRFPRFIRVRDDKSPEQATSSDQIVEL 1080
>gi|324502106|gb|ADY40927.1| DNA ligase 3 [Ascaris suum]
Length = 913
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 107/209 (51%), Gaps = 14/209 (6%)
Query: 68 DEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGG 124
D+++ + I+ EG+VLKDL S +EPG R WLK+K +Y+ G D++++G
Sbjct: 608 DKLKTMIWKAIDEGLEGLVLKDLESVYEPGKRH--WLKVKKDYLEEGKMADTADLIVLGA 665
Query: 125 YYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKY 184
YYG+G +GG ++ FL+ + D F++ + G G D LD + +L+P RK
Sbjct: 666 YYGTGCKGGMMSVFLMGVY-----DEASNVFLTVTKCGNGHDDATLDRINKELQPRMRKI 720
Query: 185 EYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA-PYSLRFPRI 243
+ P + + + + PD I+ P+K+ + IT RS+ SA S+RFPR+
Sbjct: 721 GRDYDSLPCWLKCSRSLV--PDFVIDDPKKAPVWEITG-AEFSRSDNHSARGISIRFPRV 777
Query: 244 DRVRYDKPWHDCLDVQSFVELVHSSNGTT 272
++R DK W ++ + S T
Sbjct: 778 TKIRDDKSWSSATNIDELQRMFEVSKQKT 806
>gi|242776785|ref|XP_002478901.1| DNA ligase Cdc9, putative [Talaromyces stipitatus ATCC 10500]
gi|218722520|gb|EED21938.1| DNA ligase Cdc9, putative [Talaromyces stipitatus ATCC 10500]
Length = 860
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 116/234 (49%), Gaps = 26/234 (11%)
Query: 65 HNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVL 120
+ +DE++ +E++++ EG+++K L S +EP RS WLK+K +Y+ G LD++
Sbjct: 636 NELDEIQSLLEESVKSSCEGLMVKMLDTEESGYEPSKRSRNWLKVKKDYLSGLGDSLDLV 695
Query: 121 IIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPY 180
++G Y+G G+R FL+A A ++ + F + C +GTG S+ L+ + +L P
Sbjct: 696 VLGAYFGRGKRTSVYGAFLLA-----AYNSSKQTFETICNIGTGFSEALLEELHKELSPL 750
Query: 181 FRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE-----KSIILSITSDIRTIRSEVFSAP 235
+ PK FY+ + KE+PDVW E P K+ L+++ + EV
Sbjct: 751 --AIDRPK----PFYEHSTVPKEQPDVWFE-PRLVWEIKAADLTLSPRYKAASDEVVGTS 803
Query: 236 -----YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 284
SLRFPR + R DK ++ ++ ++ GG+ DD
Sbjct: 804 GAGKGISLRFPRYIKARDDKKPEQATTTRAVADMYRRQEAVVKESAGKGGVDDD 857
>gi|386875694|ref|ZP_10117853.1| ATP-dependent DNA ligase domain protein [Candidatus Nitrosopumilus
salaria BD31]
gi|386806450|gb|EIJ65910.1| ATP-dependent DNA ligase domain protein [Candidatus Nitrosopumilus
salaria BD31]
Length = 588
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 99/202 (49%), Gaps = 26/202 (12%)
Query: 63 VAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLI 121
+ N +E+ +F + +I EG++LK L ++ G R WLKLK EY G LD+++
Sbjct: 381 IVRNENEITEFMENSINAGSEGLMLKMLDKPYQAGSRGSHWLKLKREYQNELGDSLDLVV 440
Query: 122 IGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYF 181
IGGY+G GRR G L+A D F S C+VGTG SDE+LD + L P
Sbjct: 441 IGGYFGKGRRTGNYGTLLLA-----TYDEDDDEFTSICKVGTGFSDEDLDQLFQILHPKV 495
Query: 182 RKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDI------RTIRSEVFS-A 234
+ P+ NS+ DVW E PE +I + SDI + R ++
Sbjct: 496 TIKKNPRI----------NSEMEADVWFE-PE-LVIEVVASDITLSPIHKAARDKIRKDT 543
Query: 235 PYSLRFPRI-DRVRYDKPWHDC 255
+LRFP+ ++R +K D
Sbjct: 544 GLALRFPKFTGKIRVEKAAEDA 565
>gi|389585979|dbj|GAB68708.1| DNA ligase 1 precursor [Plasmodium cynomolgi strain B]
Length = 920
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 119/232 (51%), Gaps = 26/232 (11%)
Query: 56 GEPCWSLVA--HNVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYI 111
G C++ + +N+++++ F ++ IEN EG+++K L + +EP RS WLK+K +YI
Sbjct: 694 GVLCYATHSEMNNIEDIDIFLQDAIENNCEGLMVKTLLDNASYEPSRRSLNWLKVKKDYI 753
Query: 112 RAGSD-LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEEL 170
SD +D++ I GYYG G+R G F++A ++ F + C+ GTG SDE L
Sbjct: 754 EGLSDSVDLVPIAGYYGKGKRSGVYGAFVLA-----TYNSETENFQTVCKAGTGFSDEIL 808
Query: 171 DAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIES----PEKSIILSITSDIRT 226
++ L P + S+Y+V++ K PDVW ++ K+ LS+ S + T
Sbjct: 809 GSLYETLSDKI----IPNKK--SYYEVSD--KLNPDVWFDAHYVWEVKAADLSL-SPVHT 859
Query: 227 IRSEVFS--APYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGK 276
V+S LRFPR R+R DK Q V+ + + T K K
Sbjct: 860 AAIGVYSDDKGIGLRFPRFLRLREDKNAEQATTSQQIVDF-YEAQFTNNKNK 910
>gi|358058970|dbj|GAA95368.1| hypothetical protein E5Q_02023.3 [Mixia osmundae IAM 14324]
Length = 1044
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 116/226 (51%), Gaps = 33/226 (14%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDL---GSKWEPGDRSGKWLKLKPEYIRA-GSDLDV 119
A +V+ ++ F E+I+ EG+++K L G+ +EP RS WLK+K +Y++ G D+
Sbjct: 830 ASDVEHIQAFLDESIKQGCEGLMVKMLHGQGAYYEPSRRSMNWLKVKKDYLQGVGDSFDL 889
Query: 120 LIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 179
+IGGY+G G+R FL+A + PD+ + + C++GTG S+E LD+ T LKP
Sbjct: 890 TVIGGYHGRGKRTAVYGAFLLACYD---PDS--ESYQAVCKLGTGFSEEALDSHYTVLKP 944
Query: 180 YFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP---- 235
+E KR +Y+V + PDV+ E + + + +D+ S V++A
Sbjct: 945 ----HECGKRG---YYEVGTAT---PDVYFEP--RVVWEVLAADLSL--SPVYTAAREQL 990
Query: 236 -----YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGK 276
SLRFPR R+R DK D F+ + T GK
Sbjct: 991 GGERGVSLRFPRFIRIRDDKGVEDS-TTPEFIAEAYQRQAVTVNGK 1035
>gi|312094324|ref|XP_003147982.1| DNA ligase III [Loa loa]
Length = 572
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 104/217 (47%), Gaps = 12/217 (5%)
Query: 59 CWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS--- 115
C + D++E + I+ EG+VLKDL S +EPG R WLK+K +Y++ G
Sbjct: 273 CNLIKKGETDKLEMLIWKAIDEGLEGLVLKDLDSVYEPGKRH--WLKVKKDYLKGGDMAD 330
Query: 116 DLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVT 175
D++++G +YG+G +GG ++ FL+ + D R+F + + G G D LD +
Sbjct: 331 SADLVLLGAFYGTGNKGGTMSVFLMGVY-----DKEKRKFCTVTKCGNGHDDATLDRINK 385
Query: 176 KLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP 235
+L+P K P + + + PD + P++S + I T ++
Sbjct: 386 ELEPKMHKISRVYENLPEWIDCSRSLV--PDFIVIDPKESPVWEIAGAEFTRSDNHTASG 443
Query: 236 YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTT 272
S+RFPR+ ++R DK W +Q L S T
Sbjct: 444 ISIRFPRVIKIRDDKNWETATSLQELERLFELSKPKT 480
>gi|403214978|emb|CCK69478.1| hypothetical protein KNAG_0C03740 [Kazachstania naganishii CBS
8797]
Length = 727
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 109/219 (49%), Gaps = 22/219 (10%)
Query: 55 TGEPCWS--LVAHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPE 109
TGE ++ + N++E++ F ++++N EG+++K L S +EP RS WLKLK +
Sbjct: 513 TGEFQFATEMTTTNLEELQSFLDQSVKNSCEGLMVKMLEGEESHYEPSKRSRNWLKLKKD 572
Query: 110 YIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDE 168
Y+ G LD+ ++G Y+G G+R G FL+ + + F + C++GTG SDE
Sbjct: 573 YLAGVGDSLDLCVLGAYFGRGKRTGNYGGFLLGCYNQDTGE-----FETACKIGTGFSDE 627
Query: 169 ELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSI---TSDIR 225
L + +LK + PK V + S E PDVW E +L+ S +
Sbjct: 628 VLQQLHERLKSTV--IDLPKAT-----YVFDPSAE-PDVWFEPTLLFEVLTADLSLSPVY 679
Query: 226 TIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
S + SLRFPR R+R DK D + VE+
Sbjct: 680 KAGSSTYDKGVSLRFPRFLRLREDKGVEDATSSEQIVEM 718
>gi|393906039|gb|EJD74156.1| DNA ligase [Loa loa]
Length = 840
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 104/217 (47%), Gaps = 12/217 (5%)
Query: 59 CWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS--- 115
C + D++E + I+ EG+VLKDL S +EPG R WLK+K +Y++ G
Sbjct: 541 CNLIKKGETDKLEMLIWKAIDEGLEGLVLKDLDSVYEPGKRH--WLKVKKDYLKGGDMAD 598
Query: 116 DLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVT 175
D++++G +YG+G +GG ++ FL+ + D R+F + + G G D LD +
Sbjct: 599 SADLVLLGAFYGTGNKGGTMSVFLMGVY-----DKEKRKFCTVTKCGNGHDDATLDRINK 653
Query: 176 KLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP 235
+L+P K P + + + PD + P++S + I T ++
Sbjct: 654 ELEPKMHKISRVYENLPEWIDCSRSL--VPDFIVIDPKESPVWEIAGAEFTRSDNHTASG 711
Query: 236 YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTT 272
S+RFPR+ ++R DK W +Q L S T
Sbjct: 712 ISIRFPRVIKIRDDKNWETATSLQELERLFELSKPKT 748
>gi|254572497|ref|XP_002493358.1| DNA ligase found in the nucleus and mitochondria [Komagataella
pastoris GS115]
gi|238033156|emb|CAY71179.1| DNA ligase found in the nucleus and mitochondria [Komagataella
pastoris GS115]
Length = 744
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 101/208 (48%), Gaps = 22/208 (10%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDV 119
A NV E++ F +++++ EG+++K L S +EP RS WLKLK +Y+ G LD+
Sbjct: 545 ADNVAEIQHFLDQSVKDSCEGLMVKMLDGDKSHYEPSKRSVNWLKLKKDYLEGVGDSLDL 604
Query: 120 LIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 179
++GGY G G+R G FL+A + + + + C++GTG S+E L + LKP
Sbjct: 605 AVVGGYIGKGKRTGWYGGFLLACYNEDSGE-----YETCCKIGTGFSEEMLQTLSGTLKP 659
Query: 180 YFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSI---TSDIRTIRSEVFSAPY 236
+ P FY V + S PDVW E +L+ S + F
Sbjct: 660 TV------IQQPKPFY-VYDAS---PDVWFEPTLVFEVLTADLSLSPVYKAGINFFGKGV 709
Query: 237 SLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
SLRFPR RVR DK VEL
Sbjct: 710 SLRFPRFIRVRDDKSPEQATSSDQIVEL 737
>gi|300708465|ref|XP_002996411.1| hypothetical protein NCER_100511 [Nosema ceranae BRL01]
gi|239605711|gb|EEQ82740.1| hypothetical protein NCER_100511 [Nosema ceranae BRL01]
Length = 592
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 117/225 (52%), Gaps = 34/225 (15%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRAGSD-LDVL 120
N++EV++FF+++I ++ EGI++K LG S + P R W+KLK +YI +GSD D++
Sbjct: 386 CENIEEVDEFFRQSINSQYEGIMIKLLGDGSNYIPSQRCNSWIKLKKDYIESGSDSFDLV 445
Query: 121 IIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPY 180
++G YYG G+R G FL+A + + F + C++GTG D L + ++ Y
Sbjct: 446 VVGAYYGKGKRTGWYGGFLLA-----SYNENDEMFETVCKIGTGFDDSLLSKLYEEVNNY 500
Query: 181 FRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE-----KSIILSITSDIRTIRSEVFSAP 235
+ PS +V + +PDVWI +P+ K+ +S S I ++
Sbjct: 501 V-------VSIPS--RVKYKEQTKPDVWI-TPKFVWEIKAAAVS-ASPIYCCGIDIEEKG 549
Query: 236 YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGG 280
+SLRFPR R DK D D + +++V + KEY G
Sbjct: 550 FSLRFPRFLNEREDK---DVTDATTSLQIVMNY-------KEYEG 584
>gi|402470842|gb|EJW04879.1| DNA ligase I, ATP-dependent (dnl1) [Edhazardia aedis USNM 41457]
Length = 598
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 105/200 (52%), Gaps = 18/200 (9%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDV 119
S+V + +E+E F ++I EG+++K L S ++P RS W+KLK +Y+ +D LD+
Sbjct: 386 SVVCASSEEIETIFNDSISKNCEGLMIKSLNSLYKPSMRSTSWVKLKKDYLDGMADSLDL 445
Query: 120 LIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 179
++IG YYG G+R G +L+A D Y + C++GTG +DE L + K
Sbjct: 446 VVIGAYYGKGKRTGAYGGYLLA-CYNEEEDKYE----AICKIGTGFNDETLAKIFNDFKE 500
Query: 180 YFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE-----KSIILSITSDIRTIRSEVFSA 234
Y + ++ P F Q++ N K PDVW+ P+ K+ S+ S I + +
Sbjct: 501 YV--VDNSEKMPQDF-QISENIK--PDVWL-LPKFVWEVKAAGFSL-SPIYSAAKNLNKQ 553
Query: 235 PYSLRFPRIDRVRYDKPWHD 254
SLRFPR R R DK D
Sbjct: 554 GISLRFPRFIRHRDDKEPKD 573
>gi|354546740|emb|CCE43472.1| hypothetical protein CPAR2_211160 [Candida parapsilosis]
Length = 942
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 114/523 (21%), Positives = 230/523 (43%), Gaps = 66/523 (12%)
Query: 63 VAHNVDEVEKFFKETIENRDEGIVLKDLGSKWE-PGDRSGKWLKLKPEYI-RAGSDLDVL 120
+ +V ++EK +E + +R EG+VLK + S++ G R+ W+KLKPEY+ + G +LD++
Sbjct: 449 LGSSVADIEKAIREVVTSRSEGLVLKHVQSRYVIDGFRNPNWIKLKPEYLEKFGENLDLV 508
Query: 121 IIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPY 180
+IG + G +++ L + + SFC G EE D + +
Sbjct: 509 VIG------KNPGVKNSYMMGLKNKKDGSEDYGAYYSFCMCANGFEVEEFDKIERLTHGH 562
Query: 181 FRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSE-VFSAPYSLR 239
+ ++ PP Q+ +++PD WI+ P+ S++L I + +R E F+ +L
Sbjct: 563 W--INTAQQMPPE--QLIKFGRKKPDFWID-PKYSLVLEIRARSIDVRPEATFAVGTTLH 617
Query: 240 FPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKN 299
R+R DK +C+ +Q ++E+ ++Y +QD K + +KK
Sbjct: 618 NMHCRRIREDKSIDECISMQEYIEM----------KRDY--MQDLNLKS--QTTTTKKKE 663
Query: 300 VSIVPSHFLQTDVSDIKGETSIFSDMVFYFV-----NVPPAYSLDSLHKMVVENGGTFSM 354
+ + S+ +D+ ++ E+ +F+ F + N +++ L +V GG
Sbjct: 664 LIKLTSYNEPSDLKQVEIESDLFASFEFLILSDKKDNGGEHVTIEELKTLVKRYGGHLVN 723
Query: 355 NLNNSVTH----CVAADNKGLKYEAAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSD 410
+++ S TH + N + D+I +W+ +C + ++QL+P + + D
Sbjct: 724 SIDAS-THLQVIIITEKNLPTSQRYLAQGLDLIKPAWIFECHKRNHIVQLEPCF---IFD 779
Query: 411 SSKKKLQEE-VDEFSDLYFWDLDLADIKQLLSNVDRSEDPKTIDYYKKKYCPQDKWSCFH 469
S + ++ VDE+ D Y L LA I ++ R + + ++ + K F
Sbjct: 780 SQNWDMYDQRVDEYGDSYTVHLPLARINA--PSLSRDQVDQLRQQFEWDELARPKLYLFE 837
Query: 470 GCCIYFYHSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNLANATHVVVLS------- 522
G + ++ LA + +K I G+V ++ N ++VV S
Sbjct: 838 GITFHVIGTS------------LACQLVKDRIERFSGEVVDDFVNCGYIVVPSFEEEEFR 885
Query: 523 ---VLGYDVNFNSLTESFTAREKHLLWNKKLHVVRSQWLEDCL 562
+ + ++ ++ E+ NK V +++ DC+
Sbjct: 886 QETIATLKRIYETINQNLQISEEGKFANKIPFTVIEKFIHDCI 928
>gi|269926505|ref|YP_003323128.1| ATP-dependent DNA ligase I [Thermobaculum terrenum ATCC BAA-798]
gi|269790165|gb|ACZ42306.1| DNA ligase I, ATP-dependent Dnl1 [Thermobaculum terrenum ATCC
BAA-798]
Length = 583
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 116/233 (49%), Gaps = 33/233 (14%)
Query: 46 RSQIMAADQTGEPC-----WSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRS 100
R +I+A GE W ++A NV+++ + F E IE+ EGIV K L S ++ G R+
Sbjct: 359 RREILANTIKGEDSLIVSDW-VIADNVEKLMEVFNEAIESGLEGIVAKRLDSPYQAGARN 417
Query: 101 GKWLKLKPEYIRAGSD-LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFC 159
W+KLK + D +D +I+G YG G+R A L+ P DT F +
Sbjct: 418 FNWVKLKRTHAGQLQDTVDCVIVGYIYGRGKRAQLGAGALLVAVYNPDKDT----FQTIT 473
Query: 160 RVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILS 219
++GTGL+DEE VV + KPY + E P R S +P VW+E ++++
Sbjct: 474 KIGTGLTDEEWKEVVERCKPYVTE-EKPARV---------ESIIQPSVWVEP---AVVIE 520
Query: 220 ITSDIRTIRSEVFSA-------PYSLRFPRIDRVR-YDKPWHDCLDVQSFVEL 264
+ +D RS V +A Y+LRFPR+ R DK D VQ +E+
Sbjct: 521 VLAD-EITRSPVHTAGMNGEKQGYALRFPRLVSFRESDKRPEDATTVQEIIEM 572
>gi|358058968|dbj|GAA95366.1| hypothetical protein E5Q_02023.1 [Mixia osmundae IAM 14324]
Length = 1404
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 116/226 (51%), Gaps = 33/226 (14%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDL---GSKWEPGDRSGKWLKLKPEYIRA-GSDLDV 119
A +V+ ++ F E+I+ EG+++K L G+ +EP RS WLK+K +Y++ G D+
Sbjct: 1190 ASDVEHIQAFLDESIKQGCEGLMVKMLHGQGAYYEPSRRSMNWLKVKKDYLQGVGDSFDL 1249
Query: 120 LIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 179
+IGGY+G G+R FL+A + PD+ + + C++GTG S+E LD+ T LKP
Sbjct: 1250 TVIGGYHGRGKRTAVYGAFLLACYD---PDS--ESYQAVCKLGTGFSEEALDSHYTVLKP 1304
Query: 180 YFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP---- 235
+E KR +Y+V + PDV+ E + + + +D+ S V++A
Sbjct: 1305 ----HECGKRG---YYEVGTAT---PDVYFEP--RVVWEVLAADLSL--SPVYTAAREQL 1350
Query: 236 -----YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGK 276
SLRFPR R+R DK D F+ + T GK
Sbjct: 1351 GGERGVSLRFPRFIRIRDDKGVEDS-TTPEFIAEAYQRQAVTVNGK 1395
>gi|209881935|ref|XP_002142405.1| DNA ligase I, ATP-dependent family protein [Cryptosporidium muris
RN66]
gi|209558011|gb|EEA08056.1| DNA ligase I, ATP-dependent family protein [Cryptosporidium muris
RN66]
Length = 820
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 107/216 (49%), Gaps = 24/216 (11%)
Query: 63 VAHNVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYIRAGSD-LDV 119
+ +D +E F E IEN EG+++K L + +EP RS WLK+K +YI D +DV
Sbjct: 593 ITDKIDVLETFLAEAIENNCEGLMVKTLNENASYEPSKRSLNWLKIKKDYIDGIMDSIDV 652
Query: 120 LIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 179
+ I +YG G+R G FL+A+ P + Y + C++GTG S+E ++ +L
Sbjct: 653 VPIAAFYGKGKRCGIYGTFLLAVY-NPNSEIYE----TICKIGTGFSEE----ILQRLYN 703
Query: 180 YFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE-----KSIILSITSDIRT---IRSEV 231
+Y + S+Y V + S +PDVW E P+ K LS++ T IR E
Sbjct: 704 MLTEYIISDISAKSYYHVDSISL-KPDVWFE-PKFIWEVKGADLSLSPVHNTAFGIREE- 760
Query: 232 FSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 267
LRFPR R+R DK D ++L S
Sbjct: 761 -GKGIGLRFPRFIRIREDKKPEDATTCDQIIDLFDS 795
>gi|409051591|gb|EKM61067.1| hypothetical protein PHACADRAFT_204217 [Phanerochaete carnosa
HHB-10118-sp]
Length = 843
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 106/212 (50%), Gaps = 30/212 (14%)
Query: 65 HNVDEVEKFFKETIENRDEGIVLKDL---GSKWEPGDRSGKWLKLKPEYIRA-GSDLDVL 120
+E++ F +E++++ EG+++K L S +EP RS WLKLK +Y+ G LD++
Sbjct: 625 ETTEEIQAFLEESVKDGCEGLMVKMLETEASHYEPSRRSVNWLKLKKDYLAGVGDSLDLV 684
Query: 121 IIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPY 180
++GGYYG G+R FL+A D ++ + C++GTG SDE L LKP
Sbjct: 685 VVGGYYGKGKRTNVYGAFLLACY-----DADGEQYQTICKIGTGFSDEALQQHHELLKP- 738
Query: 181 FRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP----- 235
E K P +V +PDVW E K + +T+D+ S V++A
Sbjct: 739 ---LELTK--PRGDIKVGGA---KPDVWFEP--KVVWEVLTADLSL--SPVYTAAQGLAD 786
Query: 236 ---YSLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
SLRFPR RVR DK D + E+
Sbjct: 787 ERGISLRFPRFIRVRDDKGADDATGPEQIAEM 818
>gi|212532871|ref|XP_002146592.1| DNA ligase Cdc9, putative [Talaromyces marneffei ATCC 18224]
gi|210071956|gb|EEA26045.1| DNA ligase Cdc9, putative [Talaromyces marneffei ATCC 18224]
Length = 862
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 124/261 (47%), Gaps = 29/261 (11%)
Query: 42 LSQLRSQIMAADQTGEPCWSLVAHN----VDEVEKFFKETIENRDEGIVLKDLG---SKW 94
L + R + A Q E ++ H+ +DE++ +++++ EG+++K L S +
Sbjct: 610 LRERRQLLHEAFQPTEGEFAFAQHSNTNELDEIQSLLEDSVKASCEGLMVKMLDTEESGY 669
Query: 95 EPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPR 153
EP RS WLK+K +Y++ G LD++++G Y+G G+R FL+A A + +
Sbjct: 670 EPSKRSRNWLKVKKDYLQGLGDSLDLVVLGAYFGRGKRTSVYGAFLLA-----AYNASKQ 724
Query: 154 RFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIES-- 211
F + C +GTG S+ L+ + +L P + PK FY+ + K++PDVW E
Sbjct: 725 SFETICNIGTGFSEALLEELHKELSPLV--IDRPK----PFYEHSTVPKDQPDVWFEPRL 778
Query: 212 --PEKSIILSITSDIRTIRSEVFSAP------YSLRFPRIDRVRYDKPWHDCLDVQSFVE 263
K+ L+++ + EV SLRFPR + R DK ++ E
Sbjct: 779 VWEVKAADLTLSPRYKAASEEVVGTSGADGKGISLRFPRYIKARDDKKPEQATTTRAVAE 838
Query: 264 LVHSSNGTTQKGKEYGGLQDD 284
+ ++ GG+ DD
Sbjct: 839 MYRRQEAVAKETAGKGGVDDD 859
>gi|154274049|ref|XP_001537876.1| hypothetical protein HCAG_07298 [Ajellomyces capsulatus NAm1]
gi|150415484|gb|EDN10837.1| hypothetical protein HCAG_07298 [Ajellomyces capsulatus NAm1]
Length = 790
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 113/235 (48%), Gaps = 27/235 (11%)
Query: 65 HNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVL 120
+++DE++ E+++ EG+++K L S +EP RS WLK+K +Y+ G LD++
Sbjct: 565 NDLDEIQTLLDESVKASCEGLMVKMLDTEESGYEPSKRSRNWLKVKKDYLAGIGDSLDLV 624
Query: 121 IIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPY 180
++G YYG G+R FL+A A +T + F + C +GTG S+ L+ + L P
Sbjct: 625 VLGAYYGRGKRTSVYGAFLLA-----AYNTSTQTFQTVCNIGTGFSEALLEELHKSLSPL 679
Query: 181 FRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE-----KSIILSITSDIRTIRSEVFSAP 235
P FY ++ K++PDVW E P+ K+ L+++ + E
Sbjct: 680 VID------CPKPFYDHSSVPKDQPDVWFE-PKYVWEVKAADLTLSPRYKAAADEFMGTS 732
Query: 236 Y------SLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 284
+ SLRFPR + R DK + + E+ ++ GG+ DD
Sbjct: 733 HGAGKGISLRFPRYIKSRDDKKPEEATATRQVAEMYRRQESVSKDTAGKGGVDDD 787
>gi|392571467|gb|EIW64639.1| ATP-dependent DNA ligase [Trametes versicolor FP-101664 SS1]
Length = 692
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 104/211 (49%), Gaps = 30/211 (14%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLI 121
DE++ F +E++++ EG+++K L S ++P R+ WLKLK +Y+ G LD+++
Sbjct: 474 TTDEIQTFLEESVKDGCEGLMVKMLEGELSHYQPSRRTVNWLKLKKDYLAGVGDSLDLVV 533
Query: 122 IGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYF 181
+G YYG G+R FL+A D + + C++GTG SDE L A LKP
Sbjct: 534 VGAYYGKGKRTNVYGAFLLACY-----DADSEEYQTICKIGTGFSDEALQAHAATLKP-- 586
Query: 182 RKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP------ 235
P +V +PDVW+E K + +T+D+ S +++A
Sbjct: 587 ----LEMTTPRGDVKVGGA---KPDVWLEP--KVVWEVLTADLSL--SPIYTAAQGLVEE 635
Query: 236 --YSLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
SLRFPR R+R DK D + E+
Sbjct: 636 RGISLRFPRFIRIREDKAADDATGPEQIAEM 666
>gi|358058969|dbj|GAA95367.1| hypothetical protein E5Q_02023.2 [Mixia osmundae IAM 14324]
Length = 1165
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 116/226 (51%), Gaps = 33/226 (14%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDL---GSKWEPGDRSGKWLKLKPEYIRA-GSDLDV 119
A +V+ ++ F E+I+ EG+++K L G+ +EP RS WLK+K +Y++ G D+
Sbjct: 951 ASDVEHIQAFLDESIKQGCEGLMVKMLHGQGAYYEPSRRSMNWLKVKKDYLQGVGDSFDL 1010
Query: 120 LIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 179
+IGGY+G G+R FL+A + PD+ + + C++GTG S+E LD+ T LKP
Sbjct: 1011 TVIGGYHGRGKRTAVYGAFLLACYD---PDS--ESYQAVCKLGTGFSEEALDSHYTVLKP 1065
Query: 180 YFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP---- 235
+E KR +Y+V + PDV+ E + + + +D+ S V++A
Sbjct: 1066 ----HECGKRG---YYEVGTAT---PDVYFEP--RVVWEVLAADLSL--SPVYTAAREQL 1111
Query: 236 -----YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGK 276
SLRFPR R+R DK D F+ + T GK
Sbjct: 1112 GGERGVSLRFPRFIRIRDDKGVEDS-TTPEFIAEAYQRQAVTVNGK 1156
>gi|405965797|gb|EKC31151.1| DNA ligase 1 [Crassostrea gigas]
Length = 905
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 107/225 (47%), Gaps = 41/225 (18%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEYIRA-GSDL 117
S+++ N DE+ +F E+++ EG+++K D+ + +E RS WLKLK +Y+ G L
Sbjct: 685 SMISSNTDEIAEFLDESVKGNCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDGVGDTL 744
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEEL------- 170
D++++GG+ G+G+R G+ FL+ D F S C++GTG +D +L
Sbjct: 745 DLVVMGGFLGTGKRTGKYGGFLLGCY-----DEENEEFQSICKIGTGFTDADLEKHATFF 799
Query: 171 -DAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIR 225
D V K KPY+R +S PD W ++ + K LSI+
Sbjct: 800 KDHVTEKPKPYYR----------------YDSSVEPDHWFDAVQVWEVKCADLSISP--T 841
Query: 226 TIRSEVFSAP---YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 267
+ + P SLRFPR R+R DK D EL S
Sbjct: 842 HVAAAGIVDPEKGISLRFPRFLRIRDDKKAEDATSASQVAELYKS 886
>gi|169806130|ref|XP_001827810.1| ATP-dependent DNA ligase [Enterocytozoon bieneusi H348]
gi|161779258|gb|EDQ31281.1| ATP-dependent DNA ligase [Enterocytozoon bieneusi H348]
Length = 628
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 108/221 (48%), Gaps = 39/221 (17%)
Query: 46 RSQIMAADQTGEP-----CWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRS 100
R +++ A+ T P + N ++ +FF+ NR EG+++KDLG+ ++P RS
Sbjct: 408 RRKLLHANFTTIPNVFEFAIGKIIDNNKDMNEFFEAASTNRCEGLMIKDLGALYQPSHRS 467
Query: 101 GKWLKLKPEYI-RAGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFC 159
+WLKLK +Y+ G D+++IG Y+G G+R G FL+ + F + C
Sbjct: 468 NQWLKLKKDYLDNLGDSFDLVVIGAYFGKGKRTGMYGGFLLGVYNDET-----NTFEACC 522
Query: 160 RVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNN-SKERPDVWI------ESP 212
++GTG SD+ L + +L+P Q TN K+RPD+++ E
Sbjct: 523 KIGTGFSDDYLMKIYKELEP--------------IQQHTNILVKDRPDIFVIPRFVWEIK 568
Query: 213 EKSIILS---ITSDIRTIRSEVFSAPYSLRFPRIDRVRYDK 250
S+ LS I TI ++ SLRFPR R R DK
Sbjct: 569 AASLTLSPIYIAGSTDTISNK----GISLRFPRFIRERLDK 605
>gi|428177538|gb|EKX46417.1| hypothetical protein GUITHDRAFT_157730 [Guillardia theta CCMP2712]
Length = 637
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 102/206 (49%), Gaps = 40/206 (19%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDL---GSKWEPGDRSGKWLKLKPEYIRAGSD-LDV 119
A + +E+ F + + + EG+++K L S +EP RS KWLK+K +YI +D LD+
Sbjct: 430 ASDTEEILAFLNDAVADSCEGLMVKTLFGDSSTYEPAQRSHKWLKVKKDYIDGMTDSLDL 489
Query: 120 LIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 179
+ IG ++G G+R G FL+A D F + C++GTG+SD T+LK
Sbjct: 490 VPIGAFFGKGKRTGVYGAFLLACYNEETED-----FEAICKIGTGISD-------TQLKE 537
Query: 180 YFRKYE-YPKRAPPSFYQVTNNSKERPDVWIE--------------SPEKSIILSITSDI 224
++ +E P S+YQ ++ P+VW E SP+ + + +
Sbjct: 538 FYDAFEPIIISEPKSYYQYDDSPGLLPNVWFEPKIVWEVAAADLSISPKHKAAIGLVDES 597
Query: 225 RTIRSEVFSAPYSLRFPRIDRVRYDK 250
R I +LRFPR+ RVR DK
Sbjct: 598 RGI---------ALRFPRLVRVRDDK 614
>gi|281200629|gb|EFA74847.1| DNA ligase I [Polysphondylium pallidum PN500]
Length = 1072
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 101/201 (50%), Gaps = 21/201 (10%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLGSK--WEPGDRSGKWLKLKPEYIRAGSD-LDVLII 122
+V E++ + +E ++ EG+++K K +EP RS WLK+K +Y++ +D +D++ I
Sbjct: 834 DVAEIQAYIEEAVKANCEGLMVKTFKEKSIYEPSKRSYNWLKIKKDYLKGMTDSVDIVPI 893
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
G +YG G+R G +L+A + D F + C++GTG SDE+L +L P+
Sbjct: 894 GAWYGKGKRTGVYGAYLLACYDEDNED-----FQTLCKIGTGFSDEQLQQFTEQLTPHII 948
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA-----PYS 237
+ P + Y+V+ K PDVW + +L+ I I + +
Sbjct: 949 ------QNPKNMYRVSEQLK--PDVWFSPKQVWEVLAADLSISPIHTAAAGTLDPVKGIA 1000
Query: 238 LRFPRIDRVRYDKPWHDCLDV 258
LRFPR R+R DK D +
Sbjct: 1001 LRFPRFIRIREDKNPEDATNT 1021
>gi|328772647|gb|EGF82685.1| hypothetical protein BATDEDRAFT_9401 [Batrachochytrium
dendrobatidis JAM81]
Length = 621
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 104/222 (46%), Gaps = 19/222 (8%)
Query: 62 LVAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRA-GSDLD 118
+ +++VDE++ F ++I EG+++K L + +EP RS WLK+K +Y+ G LD
Sbjct: 399 MTSNSVDEIQIFLDDSIVGNCEGLMVKTLEKEASYEPSKRSRNWLKVKKDYVNGLGDSLD 458
Query: 119 VLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLK 178
+++IGG+ G G+R G +L+A + PD + + C++GTG S+E L K
Sbjct: 459 LVVIGGFIGRGKRTGWYGGYLLACFD---PDR--EEYQTICKIGTGFSEEALAEQAESFK 513
Query: 179 PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA---- 234
+ P +Y+ + RPDVW E + I + I +
Sbjct: 514 SHIIS------KPKPYYRFGDGPNVRPDVWFEPTQVWEIKAADLSISPVHQAAVGLVDPQ 567
Query: 235 -PYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKG 275
SLRFPR RVR DK E+ ++ N T +
Sbjct: 568 KGISLRFPRFIRVRDDKSPEQATSASQIAEMYNAQNINTNEA 609
>gi|347482118|gb|AEO98059.1| DNA ligase [Emiliania huxleyi virus 203]
gi|347601305|gb|AEP15791.1| DNA ligase [Emiliania huxleyi virus 207]
gi|347601721|gb|AEP16206.1| DNA ligase I [Emiliania huxleyi virus 208]
Length = 622
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 101/208 (48%), Gaps = 19/208 (9%)
Query: 68 DEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGG 124
+EV + + ++ EG+++K L S +EP RS WLKLK +Y+ G D++ I G
Sbjct: 421 EEVAEMLNHAVLSKTEGLMVKSLDDNSSYEPSKRSLNWLKLKKDYLAGMGDSCDLVPIAG 480
Query: 125 YYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKY 184
Y G G+R G +L+A+ + PD F S C++GTG SDE+L + L P+
Sbjct: 481 YIGRGKRTGVYGAYLLAVYD---PD--EEVFQSVCKIGTGFSDEDLIQLSDSLTPHI--- 532
Query: 185 EYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA-----PYSLR 239
P++ PS Y V + +PDVW + +LS I + +LR
Sbjct: 533 -VPQK--PSDYYVADAPSLKPDVWFSPTQVWEVLSADLSISPVHMAGHGIVDPNKGIALR 589
Query: 240 FPRIDRVRYDKPWHDCLDVQSFVELVHS 267
FPR +VR DK D S VE+ S
Sbjct: 590 FPRFIKVRTDKNITDATTNLSIVEMYQS 617
>gi|393218639|gb|EJD04127.1| DNA ligase I [Fomitiporia mediterranea MF3/22]
Length = 849
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 113/231 (48%), Gaps = 32/231 (13%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDL---GSKWEPGDRSGKWLKLKPEYIRA-GSDLDV 119
+ ++ F +E++++ EG+++K L S +EP RS WLKLK +Y+ G LD+
Sbjct: 629 GETTEAIQAFLEESVKDGCEGLMIKMLETEASYYEPSKRSVNWLKLKKDYLAGVGDSLDL 688
Query: 120 LIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 179
+++G YYG G+R FL+A + PD+ + + C++GTG S+E L A T LKP
Sbjct: 689 VVVGAYYGKGKRTNVYGAFLLACYD---PDS--EEYQTICKIGTGFSEEALQAHYTTLKP 743
Query: 180 YFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP---- 235
+ E P+ +PDVW + K + +T+D+ S +++A
Sbjct: 744 L--ENEKPRGD-------IKVGGAKPDVWFDP--KVVWEVLTADLSL--SPIYTAAQGLV 790
Query: 236 ----YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKG--KEYGG 280
SLRFPR R+R DK D + E+ + KG K GG
Sbjct: 791 EERGISLRFPRFIRIRDDKSADDATGPEQIAEMYERQSLAQTKGAKKRRGG 841
>gi|407465083|ref|YP_006775965.1| ATP-dependent DNA ligase I [Candidatus Nitrosopumilus sp. AR2]
gi|407048271|gb|AFS83023.1| ATP-dependent DNA ligase I [Candidatus Nitrosopumilus sp. AR2]
Length = 588
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/202 (34%), Positives = 98/202 (48%), Gaps = 26/202 (12%)
Query: 63 VAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLI 121
+ N E+E F + +I EG++LK L ++ G R WLKLK EY G LD+++
Sbjct: 381 IVKNQSEIEDFMENSINAGSEGLMLKMLDKPYQAGSRGSHWLKLKREYRNELGDSLDLVV 440
Query: 122 IGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYF 181
IGG++G GRR G L+A + DT+P S C+VGTG SDE LD + L P
Sbjct: 441 IGGFFGKGRRTGNYGTLLLATYDED-EDTFP----SICKVGTGFSDESLDQLYQILHPKV 495
Query: 182 RKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRT--IRSEVFS-----A 234
+ P+ S DVW E PE +I + S+I I F+ A
Sbjct: 496 SIKKNPRII----------SDMEADVWFE-PE-LVIEVVASEITLSPIHKAAFNEIRKDA 543
Query: 235 PYSLRFPRI-DRVRYDKPWHDC 255
+LRFP+ ++R +K D
Sbjct: 544 GLALRFPKFTGKIRVEKAAEDA 565
>gi|255565451|ref|XP_002523716.1| DNA ligase I, putative [Ricinus communis]
gi|223537020|gb|EEF38656.1| DNA ligase I, putative [Ricinus communis]
Length = 737
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 106/198 (53%), Gaps = 21/198 (10%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRA-GSDL 117
++ +++++E++KF ++ EG+++K L + +EP RS W+KLK +YI + G L
Sbjct: 519 AITSNDLEEIQKFLDAAVDASCEGLIIKTLDKDATYEPSKRSNNWVKLKKDYIESIGDSL 578
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D++ I Y+G G+R G FL+A ++ F S C++GTG S++ L+ L
Sbjct: 579 DLVPIAAYHGRGKRTGVYGAFLLACY-----NSSTEEFESICKIGTGFSEQVLEERSNSL 633
Query: 178 KPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRSEVFS 233
R P+ P S+Y+ K +PDVW E E K+ L+I+ R V S
Sbjct: 634 ----RAKVVPQ--PKSYYRY--EEKIKPDVWFEPTEVWEVKAADLTISPVHRAAVGIVNS 685
Query: 234 -APYSLRFPRIDRVRYDK 250
SLRFPR+ RVR DK
Sbjct: 686 DKGISLRFPRLMRVREDK 703
>gi|194754293|ref|XP_001959430.1| GF12871 [Drosophila ananassae]
gi|190620728|gb|EDV36252.1| GF12871 [Drosophila ananassae]
Length = 749
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 105/234 (44%), Gaps = 55/234 (23%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYI-RAGSDL 117
+L +++DEV++F +E+++ EG+++K L + +E RS WLKLK +YI G L
Sbjct: 527 ALNTNDIDEVQQFLEESVKGNCEGLMVKTLDQEATYEIAKRSRNWLKLKKDYISNVGDSL 586
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDA----- 172
D+++IGGY G G+R G FL+A DT + + C++GTG +DE+L
Sbjct: 587 DLVVIGGYKGKGKRTGTYGGFLLACY-----DTENEEYQTICKIGTGFTDEDLQTHSEFL 641
Query: 173 ---VVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIE--------------SPEKS 215
V++ K Y+R +S PD W E SP
Sbjct: 642 GKHVISSAKSYYR----------------YDSSLEPDHWFEPVQVWEIKCADLSLSPIHR 685
Query: 216 IILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSN 269
+ I R I SLRFPR R+R DK + D + S +
Sbjct: 686 AAIGIVDGERGI---------SLRFPRFIRIRDDKNSENATDANQVAHMYQSQD 730
>gi|149245640|ref|XP_001527297.1| DNA ligase I, mitochondrial precursor [Lodderomyces elongisporus
NRRL YB-4239]
gi|146449691|gb|EDK43947.1| DNA ligase I, mitochondrial precursor [Lodderomyces elongisporus
NRRL YB-4239]
Length = 786
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 106/202 (52%), Gaps = 27/202 (13%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLI 121
+++ +++F +++++ EG+++K L S +EP RS WLKLK +Y+ G LD+++
Sbjct: 583 SLEVLQQFLDQSVKDSCEGLMVKMLEGTESYYEPSKRSRNWLKLKKDYLEGVGDSLDLVV 642
Query: 122 IGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYF 181
IG Y G G+R G FL+A + D + C++GTG S+E+L + +L P
Sbjct: 643 IGAYSGRGKRTGTYGGFLLASYNQDTGD-----LETTCKIGTGFSEEDLAKLYERLHP-- 695
Query: 182 RKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSI-TSDIRTIRSEVFSAPY---- 236
E PK A F NS PDVW E S++ + T+D+ S ++ A +
Sbjct: 696 --TEIPK-AKEYFVYDKTNSNAVPDVWFEP---SVLFEVLTADLSL--SPIYKAAHSEYG 747
Query: 237 ---SLRFPRIDRVRYDKPWHDC 255
SLRFPR R+R DK D
Sbjct: 748 KGISLRFPRFLRLRDDKDIEDA 769
>gi|30680522|ref|NP_172293.2| DNA ligase 1 [Arabidopsis thaliana]
gi|27735188|sp|Q42572.2|DNLI1_ARATH RecName: Full=DNA ligase 1; Short=AtLIG1; AltName: Full=DNA ligase
I; AltName: Full=Polydeoxyribonucleotide synthase [ATP]
1; Flags: Precursor
gi|26449576|dbj|BAC41914.1| putative DNA ligase [Arabidopsis thaliana]
gi|29029040|gb|AAO64899.1| At1g08130 [Arabidopsis thaliana]
gi|332190130|gb|AEE28251.1| DNA ligase 1 [Arabidopsis thaliana]
Length = 790
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 103/198 (52%), Gaps = 21/198 (10%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLKDLGS--KWEPGDRSGKWLKLKPEYIRA-GSDL 117
++ ++++DE++KF +++ EG+++K L S +EP RS WLKLK +Y+ + G +
Sbjct: 574 AVTSNDIDEIQKFLDASVDVGCEGLIIKTLDSDATYEPAKRSNNWLKLKKDYMDSIGDSV 633
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D++ I ++G G+R G FL+A D F S C++GTG SD LD + L
Sbjct: 634 DLVPIAAFHGRGKRTGVYGAFLLACY-----DVDKEEFQSICKIGTGFSDAMLDERSSSL 688
Query: 178 KPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRSEV-F 232
+ P +Y+V ++ PDVW E E K+ L+I+ R V
Sbjct: 689 RSQVIA------TPKQYYRVGDSLN--PDVWFEPTEVWEVKAADLTISPVHRAATGIVDP 740
Query: 233 SAPYSLRFPRIDRVRYDK 250
SLRFPR+ RVR DK
Sbjct: 741 DKGISLRFPRLLRVREDK 758
>gi|312375309|gb|EFR22707.1| hypothetical protein AND_14322 [Anopheles darlingi]
Length = 738
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 104/231 (45%), Gaps = 37/231 (16%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLII 122
++DE+++F E + EG+++K L + +E RS WLKLK +Y+ G LD+++I
Sbjct: 521 DLDELQRFLDEAVRGNCEGLMVKTLKRDATYEIAKRSRNWLKLKKDYLTGVGDSLDLVVI 580
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDA--------VV 174
GGY G G+R G FL+A D + + C++GTG SDE+L V+
Sbjct: 581 GGYRGKGKRTGTYGGFLLACY-----DADNEEYQTICKIGTGFSDEDLQRHTEFLGAHVI 635
Query: 175 TKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA 234
+ KPY+R YE + PD W E+ + +L + I
Sbjct: 636 PRAKPYYR-YE---------------ANLEPDDWFEAVQVWEVLCADLSLSPIHQAAVGI 679
Query: 235 -----PYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGG 280
SLRFPR RVR DK D Q E+ + + + GG
Sbjct: 680 VDPEKGISLRFPRFIRVRDDKGATDATTAQQVSEMYLNQDQIKNQAAGQGG 730
>gi|194885762|ref|XP_001976489.1| GG22898 [Drosophila erecta]
gi|190659676|gb|EDV56889.1| GG22898 [Drosophila erecta]
Length = 747
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 120/271 (44%), Gaps = 56/271 (20%)
Query: 33 ICVCVHVY-------------MLSQLRSQIMAADQTGEPCW----SLVAHNVDEVEKFFK 75
+ VCV+++ LS+ R ++ Q E W +L +++DEV++F +
Sbjct: 480 VQVCVYIFDLLYINGTALVTKNLSERRKLLLEHFQEVEGEWKFATALDTNDIDEVQQFLE 539
Query: 76 ETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIGGYYGSGRRG 132
E+I+ EG+++K L + +E RS WLKLK +Y+ G LD+++IGGY G GRR
Sbjct: 540 ESIKGNCEGLMVKTLDEEATYEIAKRSRNWLKLKKDYLSNVGDSLDLVVIGGYKGKGRRT 599
Query: 133 GEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPP 192
G FL+A DT + S C++GTG +DE+L L +
Sbjct: 600 GTYGGFLLACY-----DTENEEYQSICKIGTGFTDEDLQTHSEFLGKHVTD------TAK 648
Query: 193 SFYQVTNNSKERPDVWIE--------------SPEKSIILSITSDIRTIRSEVFSAPYSL 238
S+Y+ + + PD W E SP + I R I SL
Sbjct: 649 SYYRYDQSLE--PDHWFEPVQVWEVKCADLSLSPIHRAAIGIVDGERGI---------SL 697
Query: 239 RFPRIDRVRYDKPWHDCLDVQSFVELVHSSN 269
RFPR R+R DK + D + S +
Sbjct: 698 RFPRFIRIRDDKNSENATDANQVAHMYQSQD 728
>gi|255073103|ref|XP_002500226.1| predicted protein [Micromonas sp. RCC299]
gi|226515488|gb|ACO61484.1| predicted protein [Micromonas sp. RCC299]
Length = 676
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 118/232 (50%), Gaps = 22/232 (9%)
Query: 59 CWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDL 117
C + ++ +V+E++ F +++I + EG+++K + + +EP RS WLKLK +Y+ G L
Sbjct: 460 CTAKISRDVEELQVFLEDSIADNTEGLIVKTMDATYEPSKRSLNWLKLKKDYLEGCGDSL 519
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D++ IG ++G G+R G +L+A D S C++GTG SDE+L + L
Sbjct: 520 DLVPIGAFHGRGKRTGVYGAYLLACY-----DEESEELQSICKIGTGFSDEQLVELTEGL 574
Query: 178 KPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRSEVFS 233
+P + AP S+++ N+ + DVW + + K+ LSI+ + V
Sbjct: 575 RPTVIE------APRSYFKYDANAM-KCDVWFDPSQVWEVKAADLSISPVHQAGHGLVDP 627
Query: 234 AP-YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 284
+LRFPR R R DK + + + +++ T Q E+ G DD
Sbjct: 628 VKGIALRFPRFLRKRDDKNVEQATNSEQVADF-YNAQATKQ---EFAGGDDD 675
>gi|76154970|gb|AAX26356.2| SJCHGC03478 protein [Schistosoma japonicum]
Length = 203
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 105/211 (49%), Gaps = 22/211 (10%)
Query: 83 EGIVLKDL--GSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFL 139
EG+++K L S +E RS WLKLK +Y+ G LD+++IGG++G+G+R G +L
Sbjct: 4 EGLMIKTLDHNSTYEIAKRSHSWLKLKKDYLEGVGDTLDLVVIGGFHGTGKRAGRYGGYL 63
Query: 140 VALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTN 199
+A + P+T + + C++GTG+ D++L YF+ + K P +YQ T
Sbjct: 64 LACYD---PET--EEYQTICKIGTGMKDDDL----ASFSEYFKSHAVDKAKP--YYQYT- 111
Query: 200 NSKERPDVWIESPE----KSIILSITSDIRTIRSEVFS-APYSLRFPRIDRVRYDKPWHD 254
S PD W E + K+ LSI+ + V SLRFPR R+R DK D
Sbjct: 112 -SSLIPDQWFEPVQVWEVKAADLSISPAHKAAAGLVDPLKGVSLRFPRFIRIRDDKKPED 170
Query: 255 CLDVQSFVELVHSSNGT-TQKGKEYGGLQDD 284
+ EL S Q G YGG DD
Sbjct: 171 ATTAKQVYELYQSQEQIKNQHGNAYGGNDDD 201
>gi|384491447|gb|EIE82643.1| hypothetical protein RO3G_07348 [Rhizopus delemar RA 99-880]
Length = 726
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 104/200 (52%), Gaps = 21/200 (10%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSK---WEPGDRSGKWLKLKPEYIRA-GSDLDV 119
++N+++++ F ++ N EG+++K SK +EP RS WLK+K +Y+ G +D+
Sbjct: 512 SNNIEDIQTFLDVSVGNNCEGLMVKSFSSKEATYEPSKRSRNWLKVKKDYLNGVGDSMDL 571
Query: 120 LIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 179
++IG YYG G+R FL+A + P+T + + C++GTG SDE L LK
Sbjct: 572 VVIGAYYGRGKRTSVYGAFLLACYD---PET--EEYQTICKLGTGFSDENLQLFYNTLK- 625
Query: 180 YFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRSEV-FSA 234
++ P FY + +N +PD+W + + K LS++ +V +
Sbjct: 626 -----DHVINDPKRFYCLGDNPP-KPDIWFDPVQVWEVKCADLSLSPTYMAGIGKVDETK 679
Query: 235 PYSLRFPRIDRVRYDKPWHD 254
SLRFPR RVR DK D
Sbjct: 680 GISLRFPRFIRVRDDKQPED 699
>gi|425766642|gb|EKV05245.1| DNA ligase [Penicillium digitatum Pd1]
gi|425775293|gb|EKV13571.1| DNA ligase [Penicillium digitatum PHI26]
Length = 853
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 111/231 (48%), Gaps = 24/231 (10%)
Query: 67 VDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLII 122
+DE+++ + +++ EG+++K L S +EP RS WLK+K +Y+ G LD++++
Sbjct: 631 LDEIQELLEASVKASCEGLMVKMLDTAESGYEPSKRSRNWLKVKKDYLAGVGDSLDLVVL 690
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
G YYG G+R FL+A A P+ DTY + C +GTG S+ L+ + L P
Sbjct: 691 GAYYGRGKRTSVYGAFLLA-AYNPSSDTYE----TICNIGTGFSEALLEELHQTLVPLVI 745
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIES----PEKSIILSITSDIRTIRSEVFSAP--- 235
P FY + K++PDVW E K+ L+++ + E
Sbjct: 746 DR------PKPFYTHSAVPKDQPDVWFEPRLVWEVKTADLTLSPRYQAAADEFQGTTGGG 799
Query: 236 --YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 284
SLRFPR + R DK + ++ E+ T++ GG+ DD
Sbjct: 800 KGVSLRFPRFIKSRDDKKPDEATTTRAVAEMYRKQEAVTKETTSKGGVDDD 850
>gi|66359502|ref|XP_626929.1| DNA LIGASE I [Cryptosporidium parvum Iowa II]
gi|46228073|gb|EAK88972.1| DNA LIGASE I [Cryptosporidium parvum Iowa II]
Length = 825
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 117/237 (49%), Gaps = 29/237 (12%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYIRAGSD-LDVL 120
+ +D ++ F E+IEN EG+++K L + +EP RS WLK+K +Y+ +D +DV+
Sbjct: 598 TNKLDHLDSFLSESIENNCEGLMVKTLHDNASYEPSKRSLNWLKIKKDYVDGLTDSIDVV 657
Query: 121 IIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPY 180
I YG G+R G FL+A+ +T + + C+ GTG SDE L ++ T LK +
Sbjct: 658 PIAACYGKGKRNGVFGTFLLAVY-----NTEEEVYETVCKAGTGFSDEILQSLYTSLKDH 712
Query: 181 FRKYEYPKRAPPSFYQVTNN---SKERPDVWIESPE-----KSIILSI----TSDIRTIR 228
+ AP S+Y+ ++ S + DVW E P+ K LS+ T+ I TI
Sbjct: 713 I----IAEGAPKSYYKFDSSGQLSSLKQDVWFE-PKFVWEVKGADLSLSPVHTAAIGTID 767
Query: 229 SEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDK 285
+ LRFPR R+R DK +E+ ++S T K DD+
Sbjct: 768 E---NRGIGLRFPRFIRIRDDKSPEQATSSIQIMEM-YNSQLITNNTKNETNFSDDQ 820
>gi|449670179|ref|XP_004207211.1| PREDICTED: DNA ligase 3-like [Hydra magnipapillata]
Length = 759
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 109/208 (52%), Gaps = 14/208 (6%)
Query: 68 DEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGG 124
DE++ K+ EG+V+KD+ S +EPG R WLK+K +Y++ G+ D++++G
Sbjct: 385 DELQCQLKKVFSENLEGLVIKDIKSIYEPGKR--HWLKIKKDYLQDGAMADTADLVVLGA 442
Query: 125 YYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKY 184
YYG+G +GG ++ FL+ + PD +++++ + G G D+ + + + L+ +K
Sbjct: 443 YYGTGNKGGMMSVFLMGCYD---PDQ--KKWLTVAKCGNGFDDDTIKKLQSSLQ--MKKI 495
Query: 185 EYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRID 244
PS+ +V N PD P+ S + IT + + +A S+RFPR+
Sbjct: 496 SKDPDNVPSWLEV--NRSLIPDFVAVDPKTSPVWEITGAEFSQSTTHTAAGISIRFPRVT 553
Query: 245 RVRYDKPWHDCLDVQSFVELVHSSNGTT 272
+VR DK W ++ +L + S TT
Sbjct: 554 KVRSDKDWKSATNLSQLQKLYNESKKTT 581
>gi|361132047|gb|EHL03662.1| putative DNA ligase 4 [Glarea lozoyensis 74030]
Length = 906
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 114/464 (24%), Positives = 192/464 (41%), Gaps = 77/464 (16%)
Query: 152 PRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPS-FYQVTNNSK--ERPDVW 208
P + SFC+VG G E+ A+ + + ++ + PP+ F ++ + ERPD+W
Sbjct: 480 PMKCFSFCKVGGGFRAEDYAAI--RHLTGGKWVDWNRDNPPNEFIELAGGDRQLERPDMW 537
Query: 209 IESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSF------V 262
I+ P S++L + + SE F Y+LRFPR ++R DK W L + F V
Sbjct: 538 IK-PSDSVVLEVKA-ASVGPSESFKTNYTLRFPRFKKLREDKDWQSALSLSEFALLKTKV 595
Query: 263 ELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTDVSDIKG----- 317
E S G + K R K KK V I + S IK
Sbjct: 596 EAESSQRGFVVQAK-------------RKMTKRLKKEVVIAGTD------SKIKTPYAGP 636
Query: 318 ETSIFSDMVFYFVN---VPPAYSLDSLHKMVVENGGTFSMNLNNSVTHCVAADNKGLKYE 374
+T +F + F+ + P S L +M+ NGG+ + A+ + +K
Sbjct: 637 QTKVFEGLDFHVMTDMLQPFKKSKAELEQMIKANGGSIYASPTAKEHIICIAEKRPVKVA 696
Query: 375 AAKRRG--DVIHYSWVLDCCSQKK---------LLQLQPKYYLHLSDSSKKKLQEEVDEF 423
+ +RG +++ +W+ D Q + L+ +P + HL +SS++ ++ VD +
Sbjct: 697 SIIKRGETNIVRPAWLFDAIQQSEIDGPHRSRFLIPFEPTHMFHLIESSREDIEGNVDIY 756
Query: 424 SDLYFWDLDLADIKQLLSNVDRSEDPKTIDYYKKKYCPQDK----------WSCFHGCCI 473
D Y D+ ++ +L + PKT D+ + Q + + F I
Sbjct: 757 GDSYMRDITPLELGKLCEEM---LHPKTQDFDAGMFRLQLEERGRGIGELPGNIFGRHMI 813
Query: 474 YFYHSTEPLSPDWEVLLGLALRRLKLEISFHGGKVC--NNLANATHVVVLSVLGYDVNFN 531
F S D E + L L L+ + SF GGK+ + TH VV+ DV +
Sbjct: 814 RFVSSAR---TDAEKDIDLFL--LRTQFSFAGGKIAESDGADGITHFVVVDEGDEDV-VS 867
Query: 532 SLTESFTAREKHLLWNKKLHVVRSQWLEDCLAKEQKSEEYEYSL 575
L R + +VR +WL D A++ +E Y++
Sbjct: 868 GLRRKIAERRGPV-----PRIVRLKWLRDSWAEKTVLDEERYAI 906
>gi|380089931|emb|CCC12242.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 919
Score = 95.9 bits (237), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 112/237 (47%), Gaps = 28/237 (11%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSD 116
S+ +DE++ F E+++ EG+++K L S +EP RS WLK+K +Y+ G
Sbjct: 694 SMDGQELDEIQMFLDESVKASCEGLMVKMLDGAESGYEPSKRSRNWLKIKKDYLAGIGDS 753
Query: 117 LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTK 176
LD++++G Y+G G+R FL+A P DTY + C +GTG SDE L +
Sbjct: 754 LDLVVLGAYHGKGKRTSVFGAFLLA-CYNPNSDTYE----TVCNIGTGFSDEVLQELHAS 808
Query: 177 LKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE-----KSIILSITSDIRTIRSEV 231
L P + PK FY ++ + +PDVW E P+ K+ L+++ + E
Sbjct: 809 LSPII--IDRPK----PFYAHSSGGQHQPDVWFE-PKYVWEVKTADLTLSPRYKAGMKEG 861
Query: 232 FSAP----YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 284
SLRFPR +VR DK + + E+ GK G DD
Sbjct: 862 VDPAGEKGISLRFPRFIKVREDKKADEATTSRMVAEMYRKQESV---GKSKGPAVDD 915
>gi|85083459|ref|XP_957121.1| DNA ligase (Polydeoxyribonucleotide synthase [ATP]) [Neurospora
crassa OR74A]
gi|28918207|gb|EAA27885.1| DNA ligase (Polydeoxyribonucleotide synthase [ATP]) [Neurospora
crassa OR74A]
Length = 923
Score = 95.9 bits (237), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 114/237 (48%), Gaps = 28/237 (11%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSD 116
S+ +DE++ F E+++ EG+++K L S +EP RS WLK+K +Y+ G
Sbjct: 698 SMDGQELDEIQSFLDESVKAGCEGLMVKMLDGAESGYEPSKRSRNWLKIKKDYLAGIGDS 757
Query: 117 LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTK 176
LD++++G Y+G G+R FL+A P+ DTY + C +GTG SDE L + +
Sbjct: 758 LDLVVLGAYHGKGKRTSVFGAFLLA-CYNPSTDTYE----TVCNIGTGFSDEVLQELHSS 812
Query: 177 LKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE-----KSIILSITSDIRTIRSEV 231
L P + PK FY ++ + +PDVW E P+ K+ L+++ + E
Sbjct: 813 LSPII--IDRPK----PFYAHSSGGQHQPDVWFE-PKYVWEVKTADLTLSPRYKAGMKEG 865
Query: 232 FSAP----YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 284
SLRFPR +VR DK + + E+ GK G DD
Sbjct: 866 VDPSGEKGISLRFPRFIKVRDDKKPDEATTSRMVAEMYRKQESV---GKNKGPAVDD 919
>gi|366992884|ref|XP_003676207.1| hypothetical protein NCAS_0D02650 [Naumovozyma castellii CBS 4309]
gi|342302073|emb|CCC69846.1| hypothetical protein NCAS_0D02650 [Naumovozyma castellii CBS 4309]
Length = 950
Score = 95.9 bits (237), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 98/401 (24%), Positives = 171/401 (42%), Gaps = 60/401 (14%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIG- 123
N D + K + I EGIVLK S++ R+ W+K+KPEY+ + G ++D+++IG
Sbjct: 433 NEDSIRKSLELAISMGSEGIVLKRYDSRYTVASRNDDWIKVKPEYLEQFGENMDLIVIGR 492
Query: 124 --GYYGSGRRGGEVAQ--------------FLVALAERPAPDTYPR---RFISFCRVGTG 164
G S G V + ++ + AP R +F+SFC + G
Sbjct: 493 DPGKKDSLMCGLAVVEEDEKADLNENNDDNVIILDDDEDAPVEQERTIHKFVSFCVIANG 552
Query: 165 LSDEELDAVVTKLKPYF-RKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITS- 222
LS EE + K + + R E P P + Q P WI+ P+KS+++ + +
Sbjct: 553 LSQEEFKQIDRKTRGLWNRSDEIP--PPDTLLQF---GTRLPIEWID-PKKSVVIEVKAR 606
Query: 223 --DIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGG 280
D F+ +L +R DK W C + F+ + K
Sbjct: 607 SIDAAESNGRKFATGCTLYGGYCRGIREDKDWQTCYTLSEFL-----------RTKNVKS 655
Query: 281 LQDDKPKQFRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFVN------VPP 334
++ + ++ +K + L+ + +K T+ F ++ FY ++ +
Sbjct: 656 RRNGSDQVIHGVKRQKKNRRKYILDQSLEEEGGLLKN-TAFFRNLYFYVISDVFDDVLGT 714
Query: 335 AYSLDSLHKMVVENGGTFSMNLNNSVTHCVAADNKGL-------KYEAAKRRG-DVIHYS 386
+ ++K + E GGT ++N ++ N + + A RG DVI+
Sbjct: 715 RIEKERMYKYIQEGGGTL---IHNIISKQFGTRNLRIISGKLTNECSALIERGYDVINPQ 771
Query: 387 WVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEVDEFSDLY 427
W++DC K LL+L+PKY ++S KK ++ VD F D Y
Sbjct: 772 WIVDCVQSKSLLKLEPKYCFNVSTELKKLTEKRVDTFGDSY 812
>gi|336263280|ref|XP_003346420.1| hypothetical protein SMAC_05315 [Sordaria macrospora k-hell]
Length = 934
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 112/237 (47%), Gaps = 28/237 (11%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSD 116
S+ +DE++ F E+++ EG+++K L S +EP RS WLK+K +Y+ G
Sbjct: 709 SMDGQELDEIQMFLDESVKASCEGLMVKMLDGAESGYEPSKRSRNWLKIKKDYLAGIGDS 768
Query: 117 LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTK 176
LD++++G Y+G G+R FL+A P DTY + C +GTG SDE L +
Sbjct: 769 LDLVVLGAYHGKGKRTSVFGAFLLA-CYNPNSDTYE----TVCNIGTGFSDEVLQELHAS 823
Query: 177 LKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE-----KSIILSITSDIRTIRSEV 231
L P + PK FY ++ + +PDVW E P+ K+ L+++ + E
Sbjct: 824 LSPII--IDRPK----PFYAHSSGGQHQPDVWFE-PKYVWEVKTADLTLSPRYKAGMKEG 876
Query: 232 FSAP----YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 284
SLRFPR +VR DK + + E+ GK G DD
Sbjct: 877 VDPAGEKGISLRFPRFIKVREDKKADEATTSRMVAEMYRKQESV---GKSKGPAVDD 930
>gi|391328687|ref|XP_003738816.1| PREDICTED: DNA ligase 1-like [Metaseiulus occidentalis]
Length = 854
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 109/227 (48%), Gaps = 37/227 (16%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLII 122
NV+++++F +++I+ EG+++K L + +E RS WLKLK +Y+ G +DV++I
Sbjct: 642 NVEDIQEFLEQSIKGNCEGLMVKTLDNDATYEIAKRSHNWLKLKKDYLEGVGDTIDVVVI 701
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEEL--------DAVV 174
GG+ G G+R G FL+A D F S C++GTG +EEL D V+
Sbjct: 702 GGWKGKGKRTGTYGGFLLACY-----DPESEEFQSLCKIGTGFKEEELEQHTNFFKDHVL 756
Query: 175 TKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRSE 230
K+KPY+ ++ +PD W ++ + K LSI+ R
Sbjct: 757 DKVKPYY----------------NADASLQPDDWFDAVQVWEIKCADLSISPLHRAAVGL 800
Query: 231 V-FSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGK 276
V SLRFPR R+R DK D + + S + +G+
Sbjct: 801 VDPEKGISLRFPRFIRIRDDKNPEDATSAEQIASMYRSQDQIKNQGQ 847
>gi|443894934|dbj|GAC72280.1| ATP-dependent DNA ligase I [Pseudozyma antarctica T-34]
Length = 828
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 110/201 (54%), Gaps = 30/201 (14%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDL---GSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLI 121
+V+++E F + +++ EG+++K L S +EP RS WLKLK +Y+ G LD+++
Sbjct: 614 SVEQIETFLERSVKEGCEGLMVKMLRGPDSTYEPSRRSMNWLKLKKDYLAGTGDSLDLVV 673
Query: 122 IGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYF 181
IGGY G G+R FL+A + PD+ +F S C++GTG ++ +LDA LK
Sbjct: 674 IGGYLGKGKRTNVYGAFLLACYD---PDS--EKFQSICKIGTGFTEADLDAHYATLK--- 725
Query: 182 RKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP------ 235
+ E R P +Y V + +PDV+ ++ K + +T+D+ S V++A
Sbjct: 726 -QLEIGARKP--YYDVGD---AKPDVYFDA--KVVWEVLTADLSL--SPVYTAAKGLVDQ 775
Query: 236 --YSLRFPRIDRVRYDKPWHD 254
SLRFPR R+R DK D
Sbjct: 776 RGISLRFPRFIRIRDDKAPED 796
>gi|73852627|ref|YP_293911.1| putative DNA ligase [Emiliania huxleyi virus 86]
gi|72415343|emb|CAI65580.1| putative DNA ligase [Emiliania huxleyi virus 86]
Length = 622
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 101/208 (48%), Gaps = 19/208 (9%)
Query: 68 DEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGG 124
+E+ K + ++ EG+++K L S +EP RS WLKLK +Y+ G D++ I G
Sbjct: 421 EEIAKMLNHAVLSKTEGLMVKSLDDNSSYEPSKRSLNWLKLKKDYLAGMGDSCDLVPIAG 480
Query: 125 YYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKY 184
Y G G+R G +L+A+ + PD F S C++GTG SDE+L + L P+
Sbjct: 481 YTGRGKRTGVYGAYLLAVYD---PD--EEVFQSVCKIGTGFSDEDLIQLSDSLTPHI--- 532
Query: 185 EYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA-----PYSLR 239
P++ PS Y V + +PDVW + +LS I + +LR
Sbjct: 533 -VPQK--PSDYYVADVPSLKPDVWFSPTQVWEVLSADLSISPVHMAGHGIVDPNKGIALR 589
Query: 240 FPRIDRVRYDKPWHDCLDVQSFVELVHS 267
FPR +VR DK D S V++ S
Sbjct: 590 FPRFIKVRTDKNITDATTNLSIVDMYQS 617
>gi|30962491|dbj|BAC76762.1| DNA ligase I [Coprinopsis cinerea]
Length = 825
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 112/233 (48%), Gaps = 31/233 (13%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDL---GSKWEPGDRSGKWLKLKPEYIRA-GSDLDV 119
+ DE++ F +E++++ EG+++K L S +EP RS WLKLK +Y+ G LD+
Sbjct: 609 GESTDEIQTFLEESVKDGCEGLMVKMLESDASNYEPSRRSVNWLKLKKDYLAGVGDSLDL 668
Query: 120 LIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 179
+++G YYG G+R FL+A D + + C++GTG SDE L LKP
Sbjct: 669 VVVGAYYGKGKRTNYYGAFLLACY-----DADSEEYQTICKIGTGFSDEALQTHYETLKP 723
Query: 180 YFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP---- 235
++ P Y +K PD+W E K + +T+D+ S +++A
Sbjct: 724 L-------EQTKPRGYIKIGGAK--PDIWFEP--KVVWEVLTADLSL--SPIYTAAQGLV 770
Query: 236 ----YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 284
SLRFPR RVR DK D + E+ + Q G + G DD
Sbjct: 771 EERGISLRFPRFIRVRDDKDADDATAPEQIAEM-YERQSLAQAGSKKKGGDDD 822
>gi|62321656|dbj|BAD95276.1| DNA ligase like protein [Arabidopsis thaliana]
Length = 336
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 103/198 (52%), Gaps = 21/198 (10%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLKDLGS--KWEPGDRSGKWLKLKPEYIRA-GSDL 117
++ ++++DE++KF +++ EG+++K L S +EP RS WLKLK +Y+ + G +
Sbjct: 120 AVTSNDIDEIQKFLDASVDVGCEGLIIKTLDSDATYEPAKRSNNWLKLKKDYMDSIGDSV 179
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D++ I ++G G+R G FL+A D F S C++GTG SD LD + L
Sbjct: 180 DLVPIAAFHGRGKRTGVYGAFLLACY-----DVDKEEFQSICKIGTGFSDAMLDERSSSL 234
Query: 178 KPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRSEVF- 232
+ P +Y+V ++ PDVW E E K+ L+I+ R V
Sbjct: 235 RSQVIA------TPKQYYRVGDSLN--PDVWFEPTEVWEVKAADLTISPVHRAATGIVDP 286
Query: 233 SAPYSLRFPRIDRVRYDK 250
SLRFPR+ RVR DK
Sbjct: 287 DKGISLRFPRLLRVREDK 304
>gi|240282287|gb|EER45790.1| DNA ligase [Ajellomyces capsulatus H143]
Length = 899
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 111/235 (47%), Gaps = 27/235 (11%)
Query: 65 HNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVL 120
+++DE++ E+++ EG+++K L S +EP RS WLK+K +Y+ G LD++
Sbjct: 674 NDLDEIQTLLDESVKASCEGLMVKMLDTEESGYEPSKRSRNWLKVKKDYLAGIGDSLDLV 733
Query: 121 IIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPY 180
++G YYG G+R FL+A A +T + F + C +GTG S+ L+ + L P
Sbjct: 734 VLGAYYGRGKRTSVYGAFLLA-----AYNTSTQTFQTVCNIGTGFSEALLEELHKSLSPL 788
Query: 181 FRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE-----KSIILSITSDIRTIRSEVFSAP 235
P FY ++ K++PDVW E P+ K+ L+++ + E
Sbjct: 789 VIDR------PKPFYDHSSVPKDQPDVWFE-PKYVWEVKAADLTLSPRYKAAADEFMGTS 841
Query: 236 ------YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 284
SLRFPR + R DK + + E+ + GG+ DD
Sbjct: 842 NGAGKGISLRFPRYIKSRDDKKPEEATATRQVAEMYRRQESVNKDTTGKGGVDDD 896
>gi|32968197|emb|CAA80615.2| DNA ligase I [Crithidia fasciculata]
Length = 766
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 110/220 (50%), Gaps = 22/220 (10%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLII 122
NV++V+KF ++I + EG+++K L + + P RS WLK K +YI +D LD++ I
Sbjct: 557 NVEDVQKFLDKSIADGCEGLMVKTLEEQATYTPAKRSHFWLKFKKDYIDGVTDTLDLVPI 616
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
+YG G+R G FL+A + P D Y S C++GTG DEEL+ + LKP+
Sbjct: 617 AAFYGKGKRTGVFGGFLLACYD-PEADEYQ----SICKIGTGFPDEELERLTQALKPFVV 671
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITS-DIRTIRSEVFSAPYS 237
+ P +Y+ ++ PDVW+ + K+ LS++ I + +
Sbjct: 672 HDK------PRYYRAEDDG---PDVWLTEAQVWEVKAADLSVSPVHYAAIGLVDLNKGIA 722
Query: 238 LRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKE 277
LRFPR R R DK D + Q ++ + + Q E
Sbjct: 723 LRFPRYIRERDDKKPADATNAQQVADMYKAQSLAVQHDGE 762
>gi|154342041|ref|XP_001566972.1| putative DNA ligase I [Leishmania braziliensis MHOM/BR/75/M2904]
gi|134064297|emb|CAM40497.1| putative DNA ligase I [Leishmania braziliensis MHOM/BR/75/M2904]
Length = 776
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 111/216 (51%), Gaps = 22/216 (10%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRAGSD-LDVLII 122
+V++V+KF +++I + EG+++K L + + P RS WLKLK +Y+ +D LD++ I
Sbjct: 558 DVEDVQKFLEKSIADGCEGLMVKTLEEEATYTPAKRSHYWLKLKKDYMDGVTDTLDLVPI 617
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
+YG G+R G FL+A + P D Y S C++GTG DEEL+ + LKP+
Sbjct: 618 AAFYGKGKRTGVFGGFLLACYD-PKADEYQ----SICKIGTGFQDEELEKLTQSLKPFVV 672
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRSEV-FSAPYS 237
+ P +Y+ E PDVW+ + K+ LS++ + V + +
Sbjct: 673 HDK------PRYYRAGG---EEPDVWLTEAQVWEVKAADLSVSPVHQAAVGLVDPNKGIA 723
Query: 238 LRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQ 273
LRFPR R R DK D + Q E+ + + Q
Sbjct: 724 LRFPRYVRQREDKNPVDATNTQQVAEMYKAQSLAVQ 759
>gi|71001108|ref|XP_755235.1| DNA ligase Cdc9 [Aspergillus fumigatus Af293]
gi|66852873|gb|EAL93197.1| DNA ligase Cdc9, putative [Aspergillus fumigatus Af293]
gi|159129320|gb|EDP54434.1| DNA ligase Cdc9, putative [Aspergillus fumigatus A1163]
Length = 909
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 113/233 (48%), Gaps = 24/233 (10%)
Query: 65 HNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVL 120
++++E++ E+++ EG+++K L S +EP RS WLK+K +Y+ G LD++
Sbjct: 685 NDLEEIQNLLDESVKASCEGLMVKMLDTEESGYEPSKRSRNWLKVKKDYLAGVGDSLDLV 744
Query: 121 IIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPY 180
++G YYG G+R FL+A A ++ + + + C +GTG S+ L+ + +L P
Sbjct: 745 VLGAYYGRGKRTSVYGAFLLA-----AYNSSTQTYETICNIGTGFSEALLEELYKELSPL 799
Query: 181 FRKYEYPKRAPPSFYQVTNNSKERPDVWIES----PEKSIILSITSDIRTIRSEVFSAP- 235
+ PK FY +N K++PDVW E K+ L+++ + E
Sbjct: 800 --TIDRPK----PFYSHSNVPKDQPDVWFEPRLVWEVKTADLTLSPRYKAAADEFVGTAG 853
Query: 236 ----YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 284
SLRFPR + R DK ++ E+ ++ GG+ DD
Sbjct: 854 GGKGVSLRFPRFIKSRDDKKPEQATTTRAVAEMYRKQEAVLKENTSKGGVDDD 906
>gi|336469372|gb|EGO57534.1| hypothetical protein NEUTE1DRAFT_41251 [Neurospora tetrasperma FGSC
2508]
gi|350290993|gb|EGZ72207.1| ATP-dependent DNA ligase [Neurospora tetrasperma FGSC 2509]
Length = 770
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 103/203 (50%), Gaps = 25/203 (12%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSD 116
S+ +DE++ F E+++ EG+++K L S +EP RS WLK+K +Y+ G
Sbjct: 545 SMDGQELDEIQTFLDESVKAGCEGLMVKMLDGAESGYEPSKRSRNWLKIKKDYLAGIGDS 604
Query: 117 LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTK 176
LD++++G Y+G G+R FL+A P+ DTY + C +GTG SDE L + +
Sbjct: 605 LDLVVLGAYHGKGKRTSVFGAFLLA-CYNPSTDTYE----TVCNIGTGFSDEVLQELHSS 659
Query: 177 LKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE-----KSIILSITSDIRTIRSEV 231
L P P FY ++ + +PDVW E P+ K+ L+++ + E
Sbjct: 660 LSPIIIDR------PKPFYAHSSGGQHQPDVWFE-PKYVWEVKTADLTLSPRYKAGMKEG 712
Query: 232 FSAP----YSLRFPRIDRVRYDK 250
SLRFPR +VR DK
Sbjct: 713 VDPSGEKGISLRFPRFIKVRDDK 735
>gi|71649673|ref|XP_813552.1| DNA ligase I [Trypanosoma cruzi strain CL Brener]
gi|70878445|gb|EAN91701.1| DNA ligase I, putative [Trypanosoma cruzi]
Length = 701
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 110/210 (52%), Gaps = 26/210 (12%)
Query: 49 IMAADQTGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKL 106
I AA Q E L +V+E++ F +I++ EG+++K L + + P RS WLKL
Sbjct: 478 IHAAFQFAE---HLDGTDVEEIQSFLDRSIKDGCEGLMVKTLKEEAAYTPAKRSYCWLKL 534
Query: 107 KPEYIRAGSD-LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGL 165
K +Y+ +D LD++ IG YYG G+R G FL+A + + F S C++G+G
Sbjct: 535 KKDYMDGVTDTLDLVPIGAYYGKGKRTGVFGGFLLACYNSDSDE-----FQSICKIGSGF 589
Query: 166 SDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIR 225
DE+L+++ L+ + K + P +Y+ ++E+PDVW+E+ + + I
Sbjct: 590 LDEQLESLTQALQSFVLKEQ------PRYYR----AEEKPDVWLEASNVWEVKAADLSIS 639
Query: 226 TIRSEVF-----SAPYSLRFPRIDRVRYDK 250
+ + S +LRFPR RVR DK
Sbjct: 640 PVHFAAYGIVDPSKGIALRFPRFVRVREDK 669
>gi|365990417|ref|XP_003672038.1| hypothetical protein NDAI_0I02260 [Naumovozyma dairenensis CBS 421]
gi|343770812|emb|CCD26795.1| hypothetical protein NDAI_0I02260 [Naumovozyma dairenensis CBS 421]
Length = 967
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 117/506 (23%), Positives = 202/506 (39%), Gaps = 93/506 (18%)
Query: 70 VEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIGGYYG- 127
++ + I EG+VLK S++ R+ W+K+KPEY+ + G ++D+++IG G
Sbjct: 445 IKNALEHAISIGSEGVVLKHYNSRYTVASRNDDWIKVKPEYLEQFGENMDLIVIGKDPGK 504
Query: 128 -----------------SGRRGGEV----AQFLVALAERPAPDTYPR-----RFISFCRV 161
G E+ +Q + E + R RF+SFC +
Sbjct: 505 KDSLMCGLAVVEEDEPEIDEDGNEIVNLDSQDSIGEGEDKEGNEIEREKTIKRFVSFCSI 564
Query: 162 GTGLSDEELDAVVTKLKPYFRKY-EYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSI 220
G+S EE + K ++K E P PPS + P WI+ P+ SI++ +
Sbjct: 565 ANGISQEEFKYIGRITKGCWKKSDEIP---PPS--DLLEFGSRVPAEWID-PKDSIVIEV 618
Query: 221 TSDIRTIR-----SEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKG 275
+ R++ ++ F +L ++R DK W C + + G+ ++
Sbjct: 619 KA--RSLNNDEEATKKFKTGITLYGGYCRQIREDKDWKTCYTLSELRRMKRFKLGSNKRA 676
Query: 276 KEYGGLQDDKPKQFRSSRKGEKKNVSI-VPSHFLQTDVSDIKGETSIFSDMVFYFVN--- 331
+D SS++ + + + +F QT + ++ IF + FY ++
Sbjct: 677 ------NNDATHALDSSKRRKARRIDYGFEKYFEQTPTT--LDQSRIFDGLYFYVISDVV 728
Query: 332 --VPPAYSLDSLHKMVVENGGTFSMNLNNSVTHCVAADNKG--------LKYEA-----A 376
S + L+ ++ GG + H V A + G KY A
Sbjct: 729 DATGSRVSREELYDKILNRGGV--------IVHNVIAKHHGENQFRILCGKYTAECQSLI 780
Query: 377 KRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEVDEFSDLYFWDLDLADI 436
R D+I WVLDC LL+L+PKY ++S+ K + VD F D + +
Sbjct: 781 DRGYDIIEPQWVLDCIKDDMLLKLEPKYCFNVSEELMKIAKRRVDGFGDSFEAQISEDSF 840
Query: 437 KQLLSNVDRS--EDPKTIDYYKKKYCPQDKWSCFHGCCIYFYHSTEPLSPDWEVLLGLAL 494
+L+ RS P +I Y P F+G I + L
Sbjct: 841 SRLIERNVRSLRNAPPSIQYDMVDTVP---LFLFYGRTILLRIKDKAL-----------F 886
Query: 495 RRLKLEISFHGGKVCNNLANATHVVV 520
+LK++I +GGK +LA+ VV+
Sbjct: 887 TKLKVQIRLYGGKTTGDLASCNLVVI 912
>gi|356927698|gb|AET42488.1| DNA ligase [Emiliania huxleyi virus 202]
Length = 622
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 98/208 (47%), Gaps = 19/208 (9%)
Query: 68 DEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGG 124
+EV + ++ + EG+++K L S +EP RS WLKLK +Y+ G D++ I G
Sbjct: 421 EEVADMLNQAVQAKTEGLMVKSLDDNSSYEPSKRSLNWLKLKKDYLAGMGDSCDLVPIAG 480
Query: 125 YYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKY 184
Y+G G+R G +L+A+ D Y F S C++GTG SDE+L + L P+
Sbjct: 481 YHGRGKRTGVYGAYLLAVY-----DPYEEVFQSVCKIGTGFSDEDLIQLSDSLNPHRVDQ 535
Query: 185 EYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVF-----SAPYSLR 239
+ P+ Y V +PDVW + +LS I + S +LR
Sbjct: 536 K------PNDYCVAETPSLKPDVWFIPTQVWEVLSADLSISPVHMAGHGIVDPSKGIALR 589
Query: 240 FPRIDRVRYDKPWHDCLDVQSFVELVHS 267
FPR RVR DK D V++ S
Sbjct: 590 FPRFIRVRKDKNITDATTNTMIVDMYQS 617
>gi|345569158|gb|EGX52026.1| hypothetical protein AOL_s00043g416 [Arthrobotrys oligospora ATCC
24927]
Length = 877
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 113/232 (48%), Gaps = 28/232 (12%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLI 121
VDE++ +E+++++ EG+++K L S + P RS WLK+K +Y+ G LD+++
Sbjct: 658 QVDEIQSLLEESVKSQCEGLMVKMLDGEESYYTPSKRSHNWLKIKKDYLAGTGDSLDLVV 717
Query: 122 IGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYF 181
+G Y+G G+R FL+A P+ + Y + C +GTG SDE L + +L+P+
Sbjct: 718 LGAYHGKGKRTSVYGAFLLA-CYNPSSEQYE----TICNIGTGFSDEVLANLHKQLEPHI 772
Query: 182 RKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP------ 235
P +Y + +K++PDVW E ++ + T+ +A
Sbjct: 773 IA------KPKPYYSHSTVAKDQPDVWFEP---QVVWEVLCADLTLSPRYKAAADSVDAN 823
Query: 236 ---YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 284
SLRFPR R R DK + E+ + + + K+ GG+ DD
Sbjct: 824 GKGVSLRFPRYIRDRDDKKPDAATTARQVAEMYRAQDSVSGSAKK-GGVDDD 874
>gi|326435431|gb|EGD81001.1| ligase III [Salpingoeca sp. ATCC 50818]
Length = 1246
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 118/232 (50%), Gaps = 19/232 (8%)
Query: 68 DEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGG 124
+E+ K + EG+VLKD S ++PG R +WLK+K +Y++AG+ D++++G
Sbjct: 707 EELAGLMKRVMSEGLEGLVLKDRHSTYQPGKR--RWLKVKKDYLQAGALADTADLVVLGA 764
Query: 125 YYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKY 184
YYG+G +GG ++ FL+ + ++ + C+VG G +D L+ + +L +
Sbjct: 765 YYGTGTKGGIMSVFLMGCQDSKG------KWRTVCKVGNGHTDAALEKINRELD-VIKIS 817
Query: 185 EYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRID 244
+ P + P + V N S PD + P+K+ + IT + + + S+RFPR+
Sbjct: 818 KDPSKVPS--WLVINKSDLVPDFIVPDPKKAPVWEITGAEFSESTSHSADNISIRFPRVT 875
Query: 245 RVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGE 296
+VR DK W ++ +L +S T ++ DK ++R+G+
Sbjct: 876 KVRDDKDWQTATSLKELKKLYDTSKERTDIAPAPSFMKKDK-----TARRGD 922
>gi|374632962|ref|ZP_09705329.1| ATP-dependent DNA ligase I [Metallosphaera yellowstonensis MK1]
gi|373524446|gb|EHP69323.1| ATP-dependent DNA ligase I [Metallosphaera yellowstonensis MK1]
Length = 599
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 113/223 (50%), Gaps = 21/223 (9%)
Query: 48 QIMAADQTGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLK 105
+I+A + + ++ +VD++ ++F + I EG+++K +G S ++ G R W+K
Sbjct: 375 EIIAENDKVKIAEHMLTDSVDKLTEYFHQAISEGAEGVMVKSVGPNSVYQAGSRGWLWIK 434
Query: 106 LKPEYIRAGSD-LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTG 164
LK +Y +D +D++I+G +YG G+RGG+ + L+A A P D F + C+V +G
Sbjct: 435 LKKDYQSEMADTVDLVIVGAFYGKGKRGGKFSSLLMA-AYNPDKDV----FETVCKVASG 489
Query: 165 LSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILS---IT 221
SD+ELD + +K+ R +P+ S+ PDVW+ + I+
Sbjct: 490 FSDQELDEMQSKISELKRSERHPRVV----------SEMVPDVWVTPALVAEIIGAEITI 539
Query: 222 SDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
S + T E S+RFPR R R DK D + +E+
Sbjct: 540 SPLHTCCRETGKGGLSIRFPRFIRWRPDKSPEDATTTKEIMEM 582
>gi|388854717|emb|CCF51610.1| probable CDC9-DNA ligase I [Ustilago hordei]
Length = 858
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 116/231 (50%), Gaps = 30/231 (12%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLI 121
+V+E+ F ++++ EG+++K L S +EP RS WLKLK +Y+ G LD+++
Sbjct: 643 SVEEISVFLDKSVKEGCEGLMVKMLSGPDSTYEPSRRSMNWLKLKKDYLAGTGDSLDLVV 702
Query: 122 IGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYF 181
IGGYYG G+R FL+A D+ + S C++GTG ++++L++ LK
Sbjct: 703 IGGYYGKGKRTNVYGAFLLACY-----DSDSETYQSICKIGTGFTEQDLESHYKVLK--- 754
Query: 182 RKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP------ 235
E +Y V + +PDV+ E+ K + +T+D+ S V++A
Sbjct: 755 ---ELEITGKKGYYDV---GEAKPDVYFEA--KVVWEVLTADLSL--SPVYTAAKGLIEQ 804
Query: 236 --YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 284
SLRFPR RVR DK + + + + + K K GG +DD
Sbjct: 805 RGVSLRFPRFIRVRDDKMVEESTSPEQIEAMYRNQTVNSAKSKSGGGDEDD 855
>gi|357620386|gb|EHJ72598.1| hypothetical protein KGM_01327 [Danaus plexippus]
Length = 286
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 104/207 (50%), Gaps = 24/207 (11%)
Query: 68 DEVEKFFKETIENRDEGIVLKDL---GSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIG 123
+EV +F +E+++ EG+++K L ++++ RS WLKLK +Y+ G +D ++IG
Sbjct: 74 EEVAQFLQESVKASCEGLMVKALRGENARYDIARRSHNWLKLKKDYLEGVGDSVDAVVIG 133
Query: 124 GYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRK 183
Y+G G+R G FL+A + PA + Y S C++GTG SDE+L + L
Sbjct: 134 AYHGRGKRTGVYGGFLLACYD-PAHEQYQ----SLCKIGTGFSDEDLRTLSDTLA----- 183
Query: 184 YEYPKRAPPSFYQVTNNSKERPDVWIESPE-----KSIILSITSDIRTIRSEVF-SAPYS 237
E+ P S+Y +S PDVW SP + LS++ R V S S
Sbjct: 184 -EHVVDGPRSYYLF--DSSHSPDVWF-SPSCVWEVRCADLSLSPAHRAALGLVHDSKGIS 239
Query: 238 LRFPRIDRVRYDKPWHDCLDVQSFVEL 264
LRFPR RVR DK + EL
Sbjct: 240 LRFPRFIRVRDDKSAELATSAEQIAEL 266
>gi|1359495|emb|CAA66599.1| DNA ligase [Arabidopsis thaliana]
Length = 790
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 103/198 (52%), Gaps = 21/198 (10%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLKDLGS--KWEPGDRSGKWLKLKPEYIRA-GSDL 117
++ ++++DE++KF +++ EG+++K L S +EP RS WLKLK +Y+ + G +
Sbjct: 574 AVTSNDIDEIQKFLDASVDVGCEGLIIKTLDSDATYEPAKRSNNWLKLKKDYMDSIGDSV 633
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D++ I ++G G+R G FL+A D F S C++GTG SD LD + L
Sbjct: 634 DLVPIPAFHGRGKRTGVYGAFLLACY-----DVDKEEFQSICKIGTGFSDAMLDERSSSL 688
Query: 178 KPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRSEV-F 232
+ P +Y+V ++ PDVW E E K+ L+I+ R V
Sbjct: 689 RSQVIA------TPKQYYRVGDSLN--PDVWFEPTEVWEVKAADLTISPVHRAATGIVDP 740
Query: 233 SAPYSLRFPRIDRVRYDK 250
SLRFPR+ RVR DK
Sbjct: 741 DKGISLRFPRLLRVREDK 758
>gi|170582204|ref|XP_001896024.1| DNA ligase III [Brugia malayi]
gi|158596852|gb|EDP35124.1| DNA ligase III, putative [Brugia malayi]
Length = 607
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 98/188 (52%), Gaps = 12/188 (6%)
Query: 68 DEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGG 124
D++E +TI+ EG+VLKDL S +EPG R WLK+K +Y++ G D++++G
Sbjct: 346 DKLEILISKTIDEGLEGLVLKDLDSIYEPGKRH--WLKIKKDYLQGGDMADTADLILLGA 403
Query: 125 YYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKY 184
+YG G +GG ++ FL+ + D ++F + + G G D L+ + +L+P K
Sbjct: 404 FYGXGNKGGTMSVFLMGVY-----DKEKQKFCTVTKCGNGHDDATLERINKELEPKMNKI 458
Query: 185 EYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRID 244
P + + + + PD + P++S + I T ++ S+RFPR+
Sbjct: 459 SRKYENLPEWIECSRSL--VPDFIVMDPKESPVWEIAGAEFTRSDNHTASGISIRFPRVT 516
Query: 245 RVRYDKPW 252
++R DK W
Sbjct: 517 KIRDDKNW 524
>gi|73669153|ref|YP_305168.1| DNA ligase (ATP) [Methanosarcina barkeri str. Fusaro]
gi|121725644|sp|Q46C04.1|DNLI1_METBF RecName: Full=DNA ligase 1; AltName: Full=Polydeoxyribonucleotide
synthase [ATP] 1
gi|72396315|gb|AAZ70588.1| DNA ligase (ATP) [Methanosarcina barkeri str. Fusaro]
Length = 549
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 105/209 (50%), Gaps = 37/209 (17%)
Query: 62 LVAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRAGSD-LD 118
+V N++E+E FF E +E R EGI++K +G S +E G RS WLK K EY + D
Sbjct: 348 IVTDNLEEIEDFFNEALEKRLEGIIIKSMGRNSAYEAGKRSWFWLKWKEEYASGMRETFD 407
Query: 119 VLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLK 178
+ IIG YYG G+R G L A+ + +RF +F +VGTG ++ + + + L
Sbjct: 408 LAIIGKYYGRGKRKGSFGALLCAIL-----NGEEQRFETFTKVGTGFTEADAKEIDSLLS 462
Query: 179 PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP--- 235
+ E PK V S+ PD+++E S+++ + + SE+ +P
Sbjct: 463 EHIIS-EVPK-------NVLIKSRMLPDIFVEP---SLVIEV------LGSEITESPSHT 505
Query: 236 ---------YSLRFPRIDRVRYDKPWHDC 255
+LRFPR R+R+DK +D
Sbjct: 506 AGQGEGDTGLALRFPRFLRIRHDKGPYDI 534
>gi|225684450|gb|EEH22734.1| DNA ligase [Paracoccidioides brasiliensis Pb03]
Length = 1004
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 94/330 (28%), Positives = 153/330 (46%), Gaps = 27/330 (8%)
Query: 63 VAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLI 121
+ + ++E ++ + EG+VLK+ S + +R W+K+KP+Y+ G LD ++
Sbjct: 468 IGRSTADIEPLLRKVVAEASEGLVLKNPNSPYRLNERHDDWMKVKPDYMTEFGESLDCVV 527
Query: 122 IGGYYGSGRRGGEVAQFLVAL---AERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLK 178
+GGYYGSGRRGG ++ FL L P + SFC+VG G + + +
Sbjct: 528 VGGYYGSGRRGGALSSFLCGLRVDGAHAKKGDKPTKCYSFCKVGGGFTAADYANIRHHTD 587
Query: 179 PYFRKYEYPKRAPPSFYQVTNN--SKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPY 236
+ ++ PKR P + ++ + ERPDVWI+ PE S++L I + + S+ F
Sbjct: 588 GKWMDWD-PKRPPTEYIELGGDDAQHERPDVWIK-PEDSVVLCIKA-AQVTPSDQFRLGL 644
Query: 237 SLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRK-- 294
+LRFPR R+R DK W L VQ F++ S+ K KE +P+ +S++K
Sbjct: 645 TLRFPRFKRLRMDKNWQSALTVQEFMDF-KSNVEKEVKEKELRFDDTRRPRHKKSTKKPL 703
Query: 295 ------GEKKNVSIVPSHFLQTDVS--------DIKGETSIFSDMVFYFVNVPPAYSLDS 340
G KK PS L ++ + E ++ P +
Sbjct: 704 TVAGYEGGKKTAYASPSGKLFDGLNFCVYHVFFRVLDELLTLCLVIITESMQEPKKTKAQ 763
Query: 341 LHKMVVENGG-TFSMNLNNSVTHCVAADNK 369
L ++V NGG + N T C+A N+
Sbjct: 764 LEQLVKANGGKLYQTNTAAENTICIADHNQ 793
>gi|340711651|ref|XP_003394386.1| PREDICTED: DNA ligase 1-like [Bombus terrestris]
Length = 925
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 110/218 (50%), Gaps = 27/218 (12%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYIRA-GSDL 117
SL +++V+ F E+++ EG+++K L + +E RS WLKLK +Y+ G L
Sbjct: 705 SLDTSTMEQVQDFLDESVKGNCEGLMVKTLEQDATYEIAKRSRNWLKLKKDYLEGVGDTL 764
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
DV++IGGY G G+R G FL+A D + S C++GTG S+E+L K
Sbjct: 765 DVVVIGGYIGKGKRTGTYGGFLLACY-----DQENEEYQSVCKIGTGFSEEDLQ----KH 815
Query: 178 KPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSIT----SDIRTIRS 229
+F+++ P+ S+Y+ +S PD W E + K LS++ + + I
Sbjct: 816 TEFFKEHIIPQTK--SYYRY--DSSLEPDHWFEPVQVWEIKCADLSLSPVHKAAVGIIDP 871
Query: 230 EVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 267
E SLRFPR R+R DK D Q ++ +S
Sbjct: 872 E---KGISLRFPRFVRIRDDKNNEDATSAQQIADMYNS 906
>gi|340371652|ref|XP_003384359.1| PREDICTED: DNA ligase 3 [Amphimedon queenslandica]
Length = 968
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 101/205 (49%), Gaps = 15/205 (7%)
Query: 68 DEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLD----VLIIG 123
+E+ I+ EG+VLKD S +EPG R WLK+K +Y+ G+ D ++++G
Sbjct: 543 EELSDLIMTVIKKGLEGLVLKDTKSIYEPGKRH--WLKVKKDYLEGGAMADTADLLIVLG 600
Query: 124 GYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRK 183
YYG+G +GG ++ FL+ + D RF + C+ G G D + + +L
Sbjct: 601 AYYGTGSKGGLMSVFLMGVY-----DKTNDRFCTVCKCGNGHDDATIMKLQDELDMTKIS 655
Query: 184 YEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRI 243
+Y K PS+ + N PD+ + P+ + + IT + + + S+RFPR+
Sbjct: 656 KDYSKV--PSWLHI--NKGLTPDLVVSDPKSAPVWEITGAEFSQSTNHTAGGVSIRFPRV 711
Query: 244 DRVRYDKPWHDCLDVQSFVELVHSS 268
R+R DK W+ D+Q L S
Sbjct: 712 TRIRDDKDWNTATDLQRLKTLYEKS 736
>gi|429962074|gb|ELA41618.1| DNA ligase I, ATP-dependent (dnl1) [Vittaforma corneae ATCC 50505]
Length = 588
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 104/211 (49%), Gaps = 35/211 (16%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIGG 124
++++V+ FK ++ EG++LK L S ++P RS KW+KLK +Y+ G LD+++IG
Sbjct: 386 SIEDVDSHFKVALQANCEGVMLKLLQSIYKPSHRSNKWVKLKKDYLDNLGDSLDLVVIGA 445
Query: 125 YYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKY 184
+YG G+R G FL+A+ +F + C++GTG +DE L +L P
Sbjct: 446 FYGKGKRTGNFGGFLLAVYNDETD-----KFEACCKIGTGFNDEALQLYYDQLSPLI--- 497
Query: 185 EYPKRAPPSFYQVTNNSKE-RPDVWIESPE-----KSIILSITSDIRTIRSEVFSA---- 234
+ +V N + +PDVWIE P+ K+ LS S ++SA
Sbjct: 498 ------TANLSRVVYNERSVKPDVWIE-PKYVWEVKAASLS--------HSPIYSAGSSE 542
Query: 235 -PYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
SLRFPR + R DK D V +
Sbjct: 543 KGISLRFPRFIKERPDKKPEDATTSNQIVRM 573
>gi|390961360|ref|YP_006425194.1| ATP-dependent DNA ligase [Thermococcus sp. CL1]
gi|390519668|gb|AFL95400.1| ATP-dependent DNA ligase [Thermococcus sp. CL1]
Length = 559
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 99/205 (48%), Gaps = 35/205 (17%)
Query: 62 LVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVLI 121
LV + +E E F+K+ +E EG++ K L S +EPG+R KWLK+KP DLD++I
Sbjct: 377 LVTKSAEEAEAFYKKALELGHEGLMAKRLDSVYEPGNRGKKWLKIKPTM----EDLDLVI 432
Query: 122 IGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYF 181
IG +G GRR + FLVA A D + F+ +VG+G +DE+L LKP
Sbjct: 433 IGAEWGEGRRAHLLGSFLVA-----AFDPHSGEFVPVGKVGSGFTDEDLAEFTKMLKPLI 487
Query: 182 RKYE--YPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLR 239
+ E Y + P QVT +R SP+ + + ++LR
Sbjct: 488 VREEGKYVEIEPKVVIQVTYQEIQR------SPK------------------YESGFALR 523
Query: 240 FPRIDRVRYDKPWHDCLDVQSFVEL 264
FPR +R DK + ++ +L
Sbjct: 524 FPRYVALREDKSPEEADTIERIAQL 548
>gi|448513145|ref|XP_003866875.1| Lig4 DNA ligase [Candida orthopsilosis Co 90-125]
gi|380351213|emb|CCG21436.1| Lig4 DNA ligase [Candida orthopsilosis Co 90-125]
Length = 941
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 95/416 (22%), Positives = 183/416 (43%), Gaps = 60/416 (14%)
Query: 63 VAHNVDEVEKFFKETIENRDEGIVLKDLGSKWE-PGDRSGKWLKLKPEYI-RAGSDLDVL 120
+ +V +VEK +E + R EG+VLK S++ G R+ W+K+KP+Y+ + G +LD++
Sbjct: 449 LGSSVVDVEKAVREVVTKRSEGLVLKHTQSRYVIDGFRNPNWIKVKPDYLEKFGENLDLV 508
Query: 121 IIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPY 180
+IG + G +++ L + Y + SFC G EE D + + +
Sbjct: 509 VIG------KNPGVKNSYMMGLINKQEGSEYYGSYYSFCMCANGFGIEEFDKI--ERLTH 560
Query: 181 FRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSE-VFSAPYSLR 239
R ++ PP Q+ +++PD WI+ P+ S++L I + +R E F+ +L
Sbjct: 561 GRWINTAQKMPPE--QLIKFGRKKPDFWID-PKYSLVLEIRARSIDVRPEATFAVGTTLH 617
Query: 240 FPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKN 299
R+R DK +C+ +Q + EL + +QD K ++ K KK
Sbjct: 618 NMHCRRIREDKSIGECISMQEYFELKQNY------------MQDLNLKPQATTIK--KKE 663
Query: 300 VSIVPSHFLQTDVSDIKGETSIFSDMVFYFVN-----VPPAYSLDSLHKMVVENGGTFSM 354
++ + S +++ +K E+ +F+ F ++ +++ L +V GG
Sbjct: 664 LTKLTSFNEPSNLKKVKIESDLFASFEFLILSDKRDPHGEIITIEELKTLVKRFGGHLIN 723
Query: 355 NLN-NSVTHCVAADNKGL--KYEAAKRRGDVIHYSWVLDCCSQKKLLQLQP--------- 402
+++ + + K L + D++ SW+ +C + +LQL+P
Sbjct: 724 SIDAETYLQIIIITEKSLPTSQRYLSQGLDLVKPSWIFECIKRNHILQLEPCFIFDSQNW 783
Query: 403 ------------KYYLHL---SDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNV 443
Y +HL ++ +EEV+EF + WD + I L + +
Sbjct: 784 PMYDQRVGTYGDSYTVHLPLDQINAPNLTREEVNEFRQQFEWDGAIKPILYLFAGI 839
>gi|389742332|gb|EIM83519.1| ATP-dependent DNA ligase [Stereum hirsutum FP-91666 SS1]
Length = 934
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 106/216 (49%), Gaps = 30/216 (13%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLKDL---GSKWEPGDRSGKWLKLKPEYIRA-GSD 116
S+ +V+E++ F ++++ EG+++K + S +EP RS WLKLK +Y+ G
Sbjct: 713 SMDNESVEEIQTFLDVSVKDGCEGLMVKMMESEASHYEPSRRSVNWLKLKKDYLAGVGDS 772
Query: 117 LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTK 176
LD++++GGYYG G+R FL+A D+ F + C++GTG S+E L +
Sbjct: 773 LDLVVVGGYYGKGKRTNFYGAFLLACY-----DSDSEEFQTICKIGTGFSEEALASHYEA 827
Query: 177 LKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP- 235
LKP + P +PD+W E K + +T+D+ S V++A
Sbjct: 828 LKPLEMEKHRGDIKP---------GGAKPDIWFEP--KIVWEVLTADLSL--SPVYTAAQ 874
Query: 236 -------YSLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
SLRFPR RVR DK D + E+
Sbjct: 875 GLVEERGISLRFPRFIRVRDDKGADDATGPEQVAEM 910
>gi|187608350|ref|NP_001119860.1| DNA ligase 1 [Danio rerio]
Length = 1058
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 108/223 (48%), Gaps = 21/223 (9%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYIRA-GSDL 117
SL A N + + +F ++++ + EG+++K L + +E RS WLKLK +Y+ G +
Sbjct: 840 SLDADNTETIAEFLEQSVRDSCEGLMVKTLEKHATYEIAKRSHNWLKLKKDYLEGVGDTV 899
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D+ +IG Y G G+R G FL+A D F S C++GTG DE+L+ L
Sbjct: 900 DLCVIGAYLGKGKRAGGYGGFLLACY-----DEENEEFQSVCKIGTGFKDEDLEQHYNFL 954
Query: 178 KPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRSEV-F 232
K + PK P +Y+V +++ PDVW+E+ + K LS++ + V
Sbjct: 955 KEHI----LPK--PRPYYRVDQSAE--PDVWLEAVQVWEVKCADLSLSPVYKAAMGLVDP 1006
Query: 233 SAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKG 275
SLRFPR R+R DK D +L +G
Sbjct: 1007 EKGISLRFPRFLRIRDDKKPEDATTGSQIADLYKKQQQIQNQG 1049
>gi|443717140|gb|ELU08334.1| hypothetical protein CAPTEDRAFT_213234 [Capitella teleta]
Length = 841
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 94/363 (25%), Positives = 159/363 (43%), Gaps = 66/363 (18%)
Query: 68 DEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGG 124
D++ + + EG+VLKD +EPG R WLK+K +Y+ G+ D++++G
Sbjct: 510 DDLSEMMMQVFREGLEGLVLKDAKGIYEPGKRH--WLKVKKDYLAEGAMADSADLVVLGA 567
Query: 125 YYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKY 184
Y+G+G +GG ++ FL+ + D+ ++ S + G D++LD + +L
Sbjct: 568 YFGTGVKGGLMSVFLMGVY-----DSNTEKWCSVTKCHLGFDDDKLDKLQKQLDVVKISK 622
Query: 185 EYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSIT------SDIRTIRSEVFSAPYSL 238
+Y + PS+ + N + PD ++ P+KS + IT +DI T + S+
Sbjct: 623 DYSR--VPSWLNI--NRQLAPDFVVKDPKKSPVWEITGAEFSKADIHT------AGGISI 672
Query: 239 RFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQD--DKPKQFR------ 290
RFPR +VR DK W + D+ EL +K KEY L D + P + +
Sbjct: 673 RFPRCTKVRNDKSWKEATDLTRLRELF-------RKSKEYSDLPDLINSPSKSKSPFKRS 725
Query: 291 ------------SSRKGEKKNVSIVPS-HFL--QTDVSDIKGETSIFSDMVFYFVNVPPA 335
SS K K + +I S FL + ++ K ++FS M F+
Sbjct: 726 SSTKSNTDSESDSSVKKAKLDFNIFHSTSFLGQRRKQAETKNLPNVFSGMKFHLPAETEN 785
Query: 336 YSLDSLHKMVVENGGTFSMNLNNSVTHCVAADNKGLKYEAAKRRGDVIHYSWVLDCCSQK 395
YS L + ++ G + TH V + K E + W+ C +K
Sbjct: 786 YS--KLKRFIIAYDGELVDEFSKDATHYVVSKVDDPKKE--------VTVKWLRKCIMKK 835
Query: 396 KLL 398
+LL
Sbjct: 836 QLL 838
>gi|283481371|emb|CAZ69487.1| putative DNA ligase [Emiliania huxleyi virus 99B1]
Length = 622
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 101/208 (48%), Gaps = 19/208 (9%)
Query: 68 DEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGG 124
+E+ + + ++ EG+++K L S +EP RS WLKLK +Y+ G D++ I G
Sbjct: 421 EEIAEMLNHAVLSKTEGLMVKSLDDNSSYEPSKRSLNWLKLKKDYLAGMGDSCDLVPIAG 480
Query: 125 YYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKY 184
Y G G+R G +L+A+ + PD F S C++GTG SDE+L + L P+
Sbjct: 481 YTGRGKRTGVYGAYLLAVYD---PD--EEVFQSVCKIGTGFSDEDLIQLSNSLTPHI--- 532
Query: 185 EYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA-----PYSLR 239
P++ PS Y V + +PDVW + +LS I + +LR
Sbjct: 533 -VPQK--PSDYYVADVPSLKPDVWFSPTQIWEVLSADLSISPVHMAGHGIVDPDKGIALR 589
Query: 240 FPRIDRVRYDKPWHDCLDVQSFVELVHS 267
FPR +VR DK D S V++ S
Sbjct: 590 FPRFIKVRTDKNITDATTNLSIVDMYQS 617
>gi|344303172|gb|EGW33446.1| dsDNA break repair ligase [Spathaspora passalidarum NRRL Y-27907]
Length = 948
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 98/384 (25%), Positives = 180/384 (46%), Gaps = 56/384 (14%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDV 119
S ++ +++++++ +E + +R EG+VLK SK+ G R+ KW+KLKPEY+ + G +LD+
Sbjct: 446 SRISSSIEDIKRAIREIVGSRSEGLVLKHTQSKYHIGYRNLKWIKLKPEYLEKFGENLDL 505
Query: 120 LIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAV--VTKL 177
++I G+ G ++ L Y SFC G ++EE D + +T
Sbjct: 506 VVI------GKVPGVKNSYMTGLRNETDGSYY-----SFCMCANGFTNEEFDKIERITHG 554
Query: 178 KPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSE-VFSAPY 236
K K + P ++ F ++P WI +P S++L I + +SE F+
Sbjct: 555 KWIKTKDQIPSKSVIQF------GTKQPPWWI-NPRDSLVLEIKARSIDAQSEKTFAVGS 607
Query: 237 SLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGE 296
+L R+R DK +C+ +Q + +L + K Q + ++ +
Sbjct: 608 TLHNMYCRRIRTDKNIDECISMQEYFQLKEKFSTDVLKS------------QSAALKRKQ 655
Query: 297 KKNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFVN--VPPA----YSLDSLHKMVVENGG 350
N+ + F ++ + + E+++F+ F V+ + P S + L K+V + GG
Sbjct: 656 LHNLDL----FNESTIKKQRVESNLFARFNFMIVSDKLDPITGERTSREELMKLVKKYGG 711
Query: 351 TFSMNLNNSVTHCVA-----ADNKGLKY-EAAKRRG-DVIHYSWVLDCCSQKKLLQLQPK 403
NL N+V A K L E+ RG D+I +W+ +C ++ +LQL+P
Sbjct: 712 ----NLINAVDVLTADRMLVITEKMLPLCESFINRGIDLIKPNWIFECINRGTILQLEPF 767
Query: 404 YYLHLSDSSKKKLQEEVDEFSDLY 427
+ S+ K + +VD+F D Y
Sbjct: 768 FIFSTSNWDKYTVG-KVDQFGDSY 790
>gi|327279789|ref|XP_003224638.1| PREDICTED: DNA ligase 1-like [Anolis carolinensis]
Length = 913
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/212 (33%), Positives = 106/212 (50%), Gaps = 21/212 (9%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYIRA-GSDL 117
S+ N DE+ +F + +I++ EG+++K L + +E RS WLKLK +Y+ G L
Sbjct: 694 SMDTSNTDEIAEFLERSIKDSCEGLMVKTLEVDATYEIAKRSHNWLKLKKDYLDGVGDTL 753
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D+++IG Y G G+R G FL+A D F S C++GTG +DE+L+ + T L
Sbjct: 754 DLVVIGAYLGKGKRAGIYGGFLLACY-----DDESEEFQSICKIGTGFTDEDLEKLHTSL 808
Query: 178 KPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRSEV-F 232
K + P+ P +Y+ ++ PD W+E+ K LSI+ R V
Sbjct: 809 KAHV----IPQPRP--YYRWGGTAE--PDHWLETHHVWEVKCADLSISPVHRAAAGLVDE 860
Query: 233 SAPYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
SLRFPR R+R DK + EL
Sbjct: 861 EKGISLRFPRFLRLRDDKKPEEATTSAQVAEL 892
>gi|449329253|gb|AGE95526.1| DNA ligase [Encephalitozoon cuniculi]
Length = 589
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 97/189 (51%), Gaps = 20/189 (10%)
Query: 68 DEVEKFFKETIENRDEGIVLKDLGS--KWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGG 124
+E E FF +++EN EG+++K LGS + P RS KW+K+K +Y+ + SD LD++++G
Sbjct: 388 EEAETFFNKSVENNFEGMMIKTLGSDATYLPSQRSNKWIKIKKDYLESMSDSLDLVVMGA 447
Query: 125 YYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKY 184
YYG GRR G FL+ + + +F + C++GTG D L + +L
Sbjct: 448 YYGKGRRAGFYGGFLLGVY-----NDEEEKFEALCKIGTGFDDSILSKLHEQLSSSL--- 499
Query: 185 EYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFS---APYSLRFP 241
+ P Y + K PDVW+E+ + + + I S +S SLRFP
Sbjct: 500 ----CSAPKNYSYKESVK--PDVWVEAKYVWEVRAAGISLSPIYSAAWSKGEKGISLRFP 553
Query: 242 RIDRVRYDK 250
R R R DK
Sbjct: 554 RFIRERDDK 562
>gi|295669945|ref|XP_002795520.1| DNA ligase [Paracoccidioides sp. 'lutzii' Pb01]
gi|226284605|gb|EEH40171.1| DNA ligase [Paracoccidioides sp. 'lutzii' Pb01]
Length = 907
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 112/235 (47%), Gaps = 27/235 (11%)
Query: 65 HNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVL 120
++++E++ E+++ EG+++K L S +EP RS WLK+K +Y+ G LD++
Sbjct: 682 NDLEEIQTLLDESVKASCEGLMVKMLDTEESGYEPSKRSRNWLKVKKDYLAGIGDSLDLV 741
Query: 121 IIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPY 180
++G YYG G+R FL+A A P Y + C +GTG S+ L+ + + L P
Sbjct: 742 VLGAYYGRGKRTSVYGAFLLA-AYNPTTQNYE----TICNIGTGFSEALLEELYSALSPL 796
Query: 181 FRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE-----KSIILSITSDIRTIRSEVFSAP 235
P FY ++ K++PDVW E P+ K+ L+++ + E+ +
Sbjct: 797 VIDR------PKPFYDHSSVPKDQPDVWFE-PKYVWEVKAADLTLSPRYKAAADEILGSE 849
Query: 236 ------YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 284
SLRFPR + R DK + ++ ++ GG+ DD
Sbjct: 850 NGAAKGISLRFPRYIKSREDKKPDEATTTRTVADMYRKQESVANVAPAKGGVDDD 904
>gi|19074041|ref|NP_584647.1| DNA LIGASE [Encephalitozoon cuniculi GB-M1]
gi|19068683|emb|CAD25151.1| DNA LIGASE [Encephalitozoon cuniculi GB-M1]
Length = 589
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 97/189 (51%), Gaps = 20/189 (10%)
Query: 68 DEVEKFFKETIENRDEGIVLKDLGS--KWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGG 124
+E E FF +++EN EG+++K LGS + P RS KW+K+K +Y+ + SD LD++++G
Sbjct: 388 EEAETFFNKSVENNFEGMMIKTLGSDATYLPSQRSNKWIKIKKDYLESMSDSLDLVVMGA 447
Query: 125 YYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKY 184
YYG GRR G FL+ + + +F + C++GTG D L + +L
Sbjct: 448 YYGKGRRAGFYGGFLLGVY-----NDEEEKFEALCKIGTGFDDSILSKLHEQLSSSL--- 499
Query: 185 EYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFS---APYSLRFP 241
+ P Y + K PDVW+E+ + + + I S +S SLRFP
Sbjct: 500 ----CSAPKNYSYKESVK--PDVWVEAKYVWEVRAAGISLSPIYSAAWSKGEKGISLRFP 553
Query: 242 RIDRVRYDK 250
R R R DK
Sbjct: 554 RFIRERDDK 562
>gi|399216058|emb|CCF72746.1| unnamed protein product [Babesia microti strain RI]
Length = 787
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 103/202 (50%), Gaps = 32/202 (15%)
Query: 67 VDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIG 123
V+E+++F E+I N EG++ K L + +EP RS WLK+K +Y+ SD +D++ I
Sbjct: 578 VNELQEFLNESIANNSEGLIAKTLVENASYEPSKRSLNWLKIKKDYVEGMSDSVDLIPIA 637
Query: 124 GYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRK 183
+YGSG+R +L+A+ F + C+ GTG +DE L ++ +K +
Sbjct: 638 AFYGSGKRTSIFGSYLLAVYNEEY-----ETFQTVCKTGTGFTDELLKSLHETMKNFIVS 692
Query: 184 YEYPKRAPPSFYQVTNNSKERPDVWIESPEK---------SIILSITSDIRTIRSEVFSA 234
+ P +YQV++ K PD+W E P+K S+ T+ I TI S+
Sbjct: 693 NK------PVYYQVSD--KMEPDIWFE-PKKVWECKVSDFSLSPVHTASIGTIESDKVCV 743
Query: 235 PY------SLRFPRIDRVRYDK 250
+ +RFPR RVR DK
Sbjct: 744 YWYTTFGIGMRFPRFVRVREDK 765
>gi|327353118|gb|EGE81975.1| DNA ligase [Ajellomyces dermatitidis ATCC 18188]
Length = 1004
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 115/239 (48%), Gaps = 31/239 (12%)
Query: 65 HNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVL 120
+++DE++ E+++ EG+++K L S +EP RS WLK+K +Y+ G LD++
Sbjct: 775 NDLDEIQTLLDESVKASCEGLMVKMLDTEESGYEPSKRSRNWLKVKKDYLAGIGDSLDLV 834
Query: 121 IIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPY 180
++G YYG G+R FL+A P+T + F + C +GTG S+ L+ + L P
Sbjct: 835 VLGAYYGRGKRTSVYGAFLLAAYN---PNT--QNFETVCNIGTGFSEALLEELHKALSPL 889
Query: 181 FRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE-----KSIILSITSDIRTIRSEVFSAP 235
+ PK FY ++ K++PDVW E P+ K+ L+++ + EV
Sbjct: 890 V--IDRPK----PFYDHSSVPKDQPDVWFE-PKYVWEVKAADLTLSPRYKAAADEVMGIA 942
Query: 236 ----------YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 284
SLRFPR + R DK + + E+ ++ GG+ DD
Sbjct: 943 SAGSNGTVKGISLRFPRYIKARDDKKPEESTTTRQVAEMYRRQESVSKDTAGKGGVDDD 1001
>gi|195382489|ref|XP_002049962.1| GJ20456 [Drosophila virilis]
gi|194144759|gb|EDW61155.1| GJ20456 [Drosophila virilis]
Length = 667
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/251 (31%), Positives = 118/251 (47%), Gaps = 47/251 (18%)
Query: 42 LSQLRSQIMAADQTGEPCW----SLVAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWE 95
LS R + Q E W +L +++DEV++F +E+I+ EG+++K L + +E
Sbjct: 422 LSLRRKMLFEHFQEVEGQWKFATALDTNDMDEVQQFLEESIKGNCEGLMVKTLEEEATYE 481
Query: 96 PGDRSGKWLKLKPEYI-RAGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRR 154
RS WLKLK +Y+ G LD+++IGGY G GRR G FL+A DT
Sbjct: 482 IAKRSRNWLKLKKDYLSNVGDSLDLVVIGGYKGKGRRTGTYGGFLLA-----CYDTENEE 536
Query: 155 FISFCRVGTGLSDEELDA--------VVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPD 206
+ S C++GTG +D++L V K YFR Y+ PS PD
Sbjct: 537 YQSICKIGTGFTDDDLRLHSEFFNKHVTGSAKSYFR-YD------PSL---------EPD 580
Query: 207 VWIESPE----KSIILSIT----SDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDV 258
VW E + K LS++ + I + +E SLRFPR R+R DK + D
Sbjct: 581 VWFEPVQVWEVKCADLSLSPIHRASIGIVDAE---RGISLRFPRFIRIRDDKSPENATDA 637
Query: 259 QSFVELVHSSN 269
+ S +
Sbjct: 638 NQVAHMYKSQD 648
>gi|156549819|ref|XP_001606591.1| PREDICTED: DNA ligase 1-like [Nasonia vitripennis]
Length = 1128
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 114/248 (45%), Gaps = 41/248 (16%)
Query: 56 GEPCW--SLVAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYI 111
GE C+ S+ +DEV++F E+I+ EG+++K L + +E RS WLKLK +Y+
Sbjct: 901 GEWCFAKSVDVQTMDEVQEFLDESIKGNCEGLMIKTLEKEATYEIAKRSRNWLKLKKDYL 960
Query: 112 RA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEEL 170
G LD+++IGGY G G+R G FL+A D + S C++GTG S+++L
Sbjct: 961 EGVGDTLDLVVIGGYIGKGKRTGTYGGFLLACY-----DQENEEYQSICKIGTGFSEDDL 1015
Query: 171 --------DAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE-----KSII 217
+ V+ + K Y+R +S PD W E P+ K
Sbjct: 1016 TKHTEALKECVIDQAKSYYR----------------CDSSLEPDHWFE-PKLVWEVKCAD 1058
Query: 218 LSITSDIRTIRSEV-FSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGK 276
LS++ + V SLRFPR RVR DK D Q ++ S +
Sbjct: 1059 LSLSPVHGAAKGIVDPEKGISLRFPRFIRVRDDKNSEDATSAQQIADMYLSQEQIKNQTS 1118
Query: 277 EYGGLQDD 284
G ++D
Sbjct: 1119 SAGPAEED 1126
>gi|290973973|ref|XP_002669721.1| predicted protein [Naegleria gruberi]
gi|284083272|gb|EFC36977.1| predicted protein [Naegleria gruberi]
Length = 1260
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 108/199 (54%), Gaps = 13/199 (6%)
Query: 78 IENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSGRRGGEVA 136
I+ +EG+VLKDL S +EP R WLK+K +Y++ +D +D++++G Y G+G +GG ++
Sbjct: 515 IKKGEEGLVLKDLCSPYEPNARH--WLKMKKDYLKGMADSVDLVVLGAYLGTGSKGGLMS 572
Query: 137 QFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQ 196
F++ + D ++ C+ G G D+ ++ + +LK ++ P
Sbjct: 573 VFMMG-----SFDKKLGKWRIICKCGNGHDDQTIETLNEELKSNMKRISKDPSLVPDDID 627
Query: 197 VTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCL 256
+ N+ PD ++ P+KS++ I ++ S P S+RFPR+ ++R DK D L
Sbjct: 628 IHTNAL-VPDFIVKDPKKSVVWEIQGAEFSVSSRK-DRPISVRFPRVTKIRDDK---DVL 682
Query: 257 DVQSFVELVHSSNGTTQKG 275
D ++ E++ N + +KG
Sbjct: 683 DHTNYQEIIKLKNESNRKG 701
>gi|347600922|gb|AEP15409.1| DNA ligase 1 [Emiliania huxleyi virus 88]
Length = 622
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 101/208 (48%), Gaps = 19/208 (9%)
Query: 68 DEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGG 124
+E+ + + ++ EG+++K L S +EP RS WLKLK +Y+ G D++ I G
Sbjct: 421 EEIAEMLNHAVLSKTEGLMVKSLDDNSSYEPSKRSLNWLKLKKDYLAGMGDSCDLVPIAG 480
Query: 125 YYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKY 184
Y G G+R G +L+A+ + PD F S C++GTG SDE+L + L P+
Sbjct: 481 YTGRGKRTGVYGAYLLAVYD---PD--EEVFQSVCKIGTGFSDEDLIQLSDSLTPHI--- 532
Query: 185 EYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA-----PYSLR 239
P++ PS Y V + +PDVW + +LS I + +LR
Sbjct: 533 -VPQK--PSDYYVADVPSLKPDVWFSPTQVWEVLSADLSISPVHMAGHGIVDPDKGIALR 589
Query: 240 FPRIDRVRYDKPWHDCLDVQSFVELVHS 267
FPR +VR DK D S V++ S
Sbjct: 590 FPRFIKVRTDKNITDATTNLSIVDMYQS 617
>gi|261190020|ref|XP_002621420.1| DNA ligase Cdc9 [Ajellomyces dermatitidis SLH14081]
gi|239591248|gb|EEQ73829.1| DNA ligase Cdc9 [Ajellomyces dermatitidis SLH14081]
Length = 903
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 115/239 (48%), Gaps = 31/239 (12%)
Query: 65 HNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVL 120
+++DE++ E+++ EG+++K L S +EP RS WLK+K +Y+ G LD++
Sbjct: 674 NDLDEIQTLLDESVKASCEGLMVKMLDTEESGYEPSKRSRNWLKVKKDYLAGIGDSLDLV 733
Query: 121 IIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPY 180
++G YYG G+R FL+A P+T + F + C +GTG S+ L+ + L P
Sbjct: 734 VLGAYYGRGKRTSVYGAFLLAAYN---PNT--QNFETVCNIGTGFSEALLEELHKALSPL 788
Query: 181 FRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE-----KSIILSITSDIRTIRSEVFSAP 235
+ PK FY ++ K++PDVW E P+ K+ L+++ + EV
Sbjct: 789 V--IDRPK----PFYDHSSVPKDQPDVWFE-PKYVWEVKAADLTLSPRYKAAADEVMGIA 841
Query: 236 ----------YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 284
SLRFPR + R DK + + E+ ++ GG+ DD
Sbjct: 842 SAGSNGTVKGISLRFPRYIKARDDKKPEESTTTRQVAEMYRRQESVSKDTAGKGGVDDD 900
>gi|452823268|gb|EME30280.1| DNA ligase 1 [Galdieria sulphuraria]
Length = 741
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 104/206 (50%), Gaps = 22/206 (10%)
Query: 70 VEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGY 125
V++ E I+ EG+++K L S +EP +RS WLK+K +Y+ + G LD++ IG Y
Sbjct: 539 VDEMMDEAIQAGCEGLMIKALTGEYSSYEPSNRSQNWLKMKKDYMNSIGDSLDLVPIGAY 598
Query: 126 YGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYE 185
YG G+R G FL+A ++ F + C++GTG SDE L ++ F K
Sbjct: 599 YGRGKRSGVFGAFLLACY-----NSETEEFQTVCKLGTGFSDEFLSSITK-----FYKDG 648
Query: 186 YPKRAPPSFYQVTNNSKERPDVWI------ESPEKSIILSIT-SDIRTIRSEVFSAPYSL 238
+ P +Y V+++ PDVW E+ + LS + + + + SE +L
Sbjct: 649 HILAEPKPYYGVSDSPTIIPDVWFDPCQVWETRCADLTLSPSHTAAKGMLSEE-DKGIAL 707
Query: 239 RFPRIDRVRYDKPWHDCLDVQSFVEL 264
RFPR R+R DK D + VEL
Sbjct: 708 RFPRFIRIREDKSVDDATTAEQIVEL 733
>gi|354543474|emb|CCE40193.1| hypothetical protein CPAR2_102310 [Candida parapsilosis]
Length = 736
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 103/212 (48%), Gaps = 29/212 (13%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLI 121
+++ ++ F +++ + EG+++K L S +EP RS WLKLK +Y+ G LD+++
Sbjct: 531 SLEVLQHFLDQSVHDSCEGLMVKMLEGNESYYEPSKRSRNWLKLKKDYLAGVGDSLDLVV 590
Query: 122 IGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYF 181
IG Y G G+R G FL+A + D + C++GTG SDE L + KL P
Sbjct: 591 IGAYNGKGKRTGTYGGFLLASYNQDTGD-----LETTCKIGTGFSDEMLTQLYQKLHP-- 643
Query: 182 RKYEYPKRAPPSFYQVTN--NSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPY--- 236
+ A P Y V + NS PDVW E + +T+D+ S ++ A +
Sbjct: 644 -----SEIAKPKEYFVYDKTNSNAVPDVWFEP--TMLFEVLTADLSL--SPIYKAAHNEY 694
Query: 237 ----SLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
SLRFPR R+R DK D E
Sbjct: 695 GKGISLRFPRFIRIRDDKGIEDATSSTEIAEF 726
>gi|239606310|gb|EEQ83297.1| DNA ligase Cdc9 [Ajellomyces dermatitidis ER-3]
Length = 900
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 115/239 (48%), Gaps = 31/239 (12%)
Query: 65 HNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVL 120
+++DE++ E+++ EG+++K L S +EP RS WLK+K +Y+ G LD++
Sbjct: 671 NDLDEIQTLLDESVKASCEGLMVKMLDTEESGYEPSKRSRNWLKVKKDYLAGIGDSLDLV 730
Query: 121 IIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPY 180
++G YYG G+R FL+A P+T + F + C +GTG S+ L+ + L P
Sbjct: 731 VLGAYYGRGKRTSVYGAFLLAAYN---PNT--QNFETVCNIGTGFSEALLEELHKALSPL 785
Query: 181 FRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE-----KSIILSITSDIRTIRSEVFSAP 235
+ PK FY ++ K++PDVW E P+ K+ L+++ + EV
Sbjct: 786 V--IDRPK----PFYDHSSVPKDQPDVWFE-PKYVWEVKAADLTLSPRYKAAADEVMGIA 838
Query: 236 ----------YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 284
SLRFPR + R DK + + E+ ++ GG+ DD
Sbjct: 839 SAGSNGTVKGISLRFPRYIKARDDKKPEESTTTRQVAEMYRRQESVSKDTAGKGGVDDD 897
>gi|146302935|ref|YP_001190251.1| ATP-dependent DNA ligase [Metallosphaera sedula DSM 5348]
gi|172046897|sp|A4YD25.1|DNLI_METS5 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|145701185|gb|ABP94327.1| DNA ligase I, ATP-dependent Dnl1 [Metallosphaera sedula DSM 5348]
Length = 598
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 119/231 (51%), Gaps = 38/231 (16%)
Query: 48 QIMAADQTGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLK 105
+I+A++ ++A VD++ ++F + I EG+++K +G S ++ G R W+K
Sbjct: 375 EILASNDKVHIASHIIADRVDKLREYFYQAISEGAEGVMVKSIGPDSIYQAGSRGWLWIK 434
Query: 106 LKPEYIRAGSD-LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTG 164
LK +Y +D +D++++G +YG G+RGG+ + L+A A P D F + C+V +G
Sbjct: 435 LKRDYQSEMADTVDLVVVGAFYGKGKRGGKFSSLLMA-AYNPEKDV----FETVCKVASG 489
Query: 165 LSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDI 224
SD+ELD + K+ R+ ++P+ S PDVW+ SP ++ +++
Sbjct: 490 FSDQELDEMQKKINELKREQKHPRVV----------SDMIPDVWV-SP------TLVAEV 532
Query: 225 RTIRSEVFSAP-----------YSLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
I +E+ +P S+RFPR R R DK D Q +E+
Sbjct: 533 --IGAEITISPLHTCCRGEKGGLSIRFPRFIRWRDDKSPEDATTNQEIMEM 581
>gi|393247839|gb|EJD55346.1| ATP-dependent DNA ligase [Auricularia delicata TFB-10046 SS5]
Length = 605
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 111/231 (48%), Gaps = 26/231 (11%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDL---GSKWEPGDRSGKWLKLKPEYIRA-GSDLDV 119
+E++ F +E+I++ EG+++K L S +EP RS WLKLK +Y+ G LD+
Sbjct: 388 GETTEEIQLFLEESIKDGCEGLMVKMLQSDASYYEPSRRSVNWLKLKKDYLAGVGDSLDL 447
Query: 120 LIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 179
+++G Y+G+G+R G FL+A + PDT F + C++GTG S+E L A
Sbjct: 448 VVVGAYHGAGKRTGVYGAFLLACYD---PDT--EEFQTICKIGTGFSEEALKA------- 495
Query: 180 YFRKYEYPKRAPPSFYQV-TNNSKERPDVWIESPEK-----SIILSITSDIRTIRSEVFS 233
+E + + + +PDVW+E P+ + LS++ + +V
Sbjct: 496 ---HHETLRELEVAVCRGDVRAGGAKPDVWLE-PKVVWEVLAADLSLSPIYTAAQGKVDQ 551
Query: 234 APYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 284
SLRFPR RVR DK D E+ K + GG DD
Sbjct: 552 RGISLRFPRFIRVRDDKNADDATGPDQISEMYERQALAQTKSSKKGGGGDD 602
>gi|254571701|ref|XP_002492960.1| DNA ligase required for nonhomologous end-joining (NHEJ)
[Komagataella pastoris GS115]
gi|238032758|emb|CAY70781.1| DNA ligase required for nonhomologous end-joining (NHEJ)
[Komagataella pastoris GS115]
Length = 932
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 96/393 (24%), Positives = 172/393 (43%), Gaps = 43/393 (10%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLII 122
H ++E + I + EGIV+K+ SK+ R+ W+K+KPEY+ G ++D++I+
Sbjct: 434 GHVGSDIEAAMRSAIHDNREGIVVKNPKSKYYIASRNLNWVKIKPEYLEEFGENIDLIIL 493
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
G+R G ++ L E D Y RF+S R+ G + + + + L +
Sbjct: 494 ------GKRKGLKNAYICGLRESLGNDRY--RFLSLARIANGFTGQMYEEIEHSLGSKWV 545
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTI----RSEVFSAPYSL 238
K PP Y D W++ P++S++L I + R+I + ++A +L
Sbjct: 546 NIR--KTQPPYPYIDLGEISSMVDYWVD-PKESVVLEIKA--RSIDIGDGGKRYAAGTTL 600
Query: 239 RFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKK 298
R+R DK + C + E+ T K + + +K S RK
Sbjct: 601 YNAYCVRIRSDKDFLSCSTFADYKEI------KTSKSRH----KTEKTHSLMSKRKR--- 647
Query: 299 NVSIVPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPA---YSLDSLHKMVVENGGTFSMN 355
+IV L + ++SIF D +FY ++ YS+ L ++VENGG + N
Sbjct: 648 --TIVTEPILAK--QSVSSKSSIFKDYIFYVLSDMLGEKRYSIAQLEALLVENGGRITKN 703
Query: 356 ----LNNSVTHCVAADNKGLKYEAAKRRG-DVIHYSWVLDCCSQKKLLQLQPKYYLHLSD 410
L + + +D K +G +V ++L C K ++ LQ L +
Sbjct: 704 DCVALADGERLVLLSDKITFKVTEYFNKGLNVFRPGFILKCLQLKTIIPLQINDILLADE 763
Query: 411 SSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNV 443
S +K+++ D F D Y +D +++ L+ +
Sbjct: 764 SLIEKVKKNSDRFGDSYTSPIDRKELRMLMKGI 796
>gi|328353026|emb|CCA39424.1| DNA ligase 4 [Komagataella pastoris CBS 7435]
Length = 932
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 96/393 (24%), Positives = 172/393 (43%), Gaps = 43/393 (10%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLII 122
H ++E + I + EGIV+K+ SK+ R+ W+K+KPEY+ G ++D++I+
Sbjct: 434 GHVGSDIEAAMRSAIHDNREGIVVKNPKSKYYIASRNLNWVKIKPEYLEEFGENIDLIIL 493
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
G+R G ++ L E D Y RF+S R+ G + + + + L +
Sbjct: 494 ------GKRKGLKNAYICGLRESLGNDRY--RFLSLARIANGFTGQMYEEIEHSLGSKWV 545
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTI----RSEVFSAPYSL 238
K PP Y D W++ P++S++L I + R+I + ++A +L
Sbjct: 546 NIR--KTQPPYPYIDLGEISSMVDYWVD-PKESVVLEIKA--RSIDIGDGGKRYAAGTTL 600
Query: 239 RFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKK 298
R+R DK + C + E+ T K + + +K S RK
Sbjct: 601 YNAYCVRIRSDKDFLSCSTFADYKEI------KTSKSRH----KTEKTHSLMSKRKR--- 647
Query: 299 NVSIVPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPA---YSLDSLHKMVVENGGTFSMN 355
+IV L + ++SIF D +FY ++ YS+ L ++VENGG + N
Sbjct: 648 --TIVTEPILAK--QSVSSKSSIFKDYIFYVLSDMLGEKRYSIAQLEALLVENGGRITKN 703
Query: 356 ----LNNSVTHCVAADNKGLKYEAAKRRG-DVIHYSWVLDCCSQKKLLQLQPKYYLHLSD 410
L + + +D K +G +V ++L C K ++ LQ L +
Sbjct: 704 DCVALADGERLVLLSDKITFKVTEYFNKGLNVFRPGFILKCLQLKTIIPLQINDILLADE 763
Query: 411 SSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNV 443
S +K+++ D F D Y +D +++ L+ +
Sbjct: 764 SLIEKVKKNSDRFGDSYTSPIDRKELRMLMKGI 796
>gi|340054328|emb|CCC48624.1| putative DNA ligase I [Trypanosoma vivax Y486]
Length = 696
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 126/274 (45%), Gaps = 46/274 (16%)
Query: 30 NDGICVCVHVYMLSQLRSQIMAADQTGEPCWSLVAH-----------------NVDEVEK 72
N I VCV V+ L Q A L AH +VD+++
Sbjct: 437 NVTIPVCVFVFDLLYFNGQPQMAKPLAARREVLRAHFTPVHTKFQFAEHLDSGDVDDIQA 496
Query: 73 FFKETIENRDEGIVLKDLGSK--WEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSG 129
F + +I + EG+++K L + + P RS WLKLK +Y+ +D LD++ IG YYG G
Sbjct: 497 FLERSIRDGAEGLMIKTLEEEAFYTPAKRSHYWLKLKKDYMDGVADTLDLVPIGAYYGKG 556
Query: 130 RRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKR 189
+R G FL+A DT + S C++GTG D++L+++ L+ + +
Sbjct: 557 KRTGVFGGFLLACY-----DTENDEYQSICKIGTGFQDDQLESITRVLQSCILEEQ---- 607
Query: 190 APPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA--------PYSLRFP 241
P +Y+ ++++ DVW+++ S + + + +I F+A +LRFP
Sbjct: 608 --PRYYR----TEDKADVWLQA---SQVWEVRAADLSISPAHFAAYGLVDPSKGIALRFP 658
Query: 242 RIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKG 275
R RVR DK H+ E+ + + + G
Sbjct: 659 RFVRVREDKQAHEATSALQVAEMYNVQSLAQKSG 692
>gi|392597419|gb|EIW86741.1| ATP-dependent DNA ligase [Coniophora puteana RWD-64-598 SS2]
Length = 834
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 103/214 (48%), Gaps = 32/214 (14%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDL---GSKWEPGDRSGKWLKLKPEYIRA-GSDLDV 119
DE++ F +E++++ EG+++K L S +EP RS WLKLK +Y+ G LD+
Sbjct: 616 GETTDEIQTFLEESVKDGCEGLMVKMLETDASYYEPSRRSVNWLKLKKDYLAGVGDSLDL 675
Query: 120 LIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 179
+++GGYYG G+R FL+A D + + C++GTG S+E L L+P
Sbjct: 676 VVVGGYYGKGKRTNVYGAFLLACY-----DADAEEYQTICKIGTGFSEEALQQHWDTLRP 730
Query: 180 Y-FRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP--- 235
K +A +PD+W E K + +T+D+ S V++A
Sbjct: 731 LEMEKLRGDLKA----------GGAKPDIWFEP--KIVWEVLTADLSL--SPVYTAAQGL 776
Query: 236 -----YSLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
SLRFPR RVR DK D + E+
Sbjct: 777 VEERGISLRFPRFLRVRDDKSADDATGPEQVAEM 810
>gi|444321829|ref|XP_004181570.1| hypothetical protein TBLA_0G01040 [Tetrapisispora blattae CBS 6284]
gi|387514615|emb|CCH62051.1| hypothetical protein TBLA_0G01040 [Tetrapisispora blattae CBS 6284]
Length = 972
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 105/417 (25%), Positives = 183/417 (43%), Gaps = 59/417 (14%)
Query: 69 EVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYG 127
+++K I EGIVLK SK+ P R W+K+KPEY+ G ++D+++IG
Sbjct: 449 QIKKGLDAAISVGSEGIVLKQYISKYIPNARHNNWIKVKPEYLEEFGENMDLIVIGR--D 506
Query: 128 SGRRGGEVAQFLVA-----LAERPA---------------PDTYP----RRFISFCRVGT 163
SG++ + LV L+E DT P ++ ISFC +
Sbjct: 507 SGKKDCLICGILVTEEKQELSENMKRESEIEIISDSGDDDLDTKPSQGIKKVISFCTIAN 566
Query: 164 GLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSIT-- 221
GLS EL + + ++ Y PP V ++P WI P+ S++L I
Sbjct: 567 GLSQNELKEINRITRGAWKNYN--NETPP--IDVLEFGTKKPVEWI-YPQDSVVLEIKAR 621
Query: 222 SDIRTIRSEV-FSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGG 280
S RT +++ ++ +L ++R DK W C + T + K +
Sbjct: 622 SLDRTDQTQYKYATGCTLYGGYCRQIRQDKDWTSCYTLHDL---------TYNEIKRHEK 672
Query: 281 LQDDKPKQFRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFVN--VP--PAY 336
+K RS + + K +S P+ L +D++ + +F + FY ++ +P A
Sbjct: 673 KNKNKQTLIRSYSRKKSKIIS--PAGMLPNG-TDLRLISDLFHGLYFYIISDYIPDSDAQ 729
Query: 337 SLD--SLHKMVVENGGTFSMNLNNSVTHC----VAADNKGLKYEAAKRRG-DVIHYSWVL 389
+D + ++++NGG N+ + + ++ RRG DVI+ SW+
Sbjct: 730 RIDREDICSLIIKNGGRVIYNVIAKTYTISKLRILSSKSTIECTDLVRRGYDVINLSWLF 789
Query: 390 DCCSQKKLLQLQPKYYLHLSDSSKKKLQEEVDEFSDLYFWDL-DLADIKQLLSNVDR 445
DC +L L+P + L +S+ + +D+F D Y L D +K L SN+++
Sbjct: 790 DCLQAGVILPLEPAHCLFVSNELLAIATDRIDKFGDSYEATLIDSKLLKLLDSNINK 846
>gi|327507709|sp|P0CL74.1|DNLI_PYRAY RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|12054709|emb|CAC20743.1| DNA ligase [Pyrococcus abyssi]
Length = 559
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 118/244 (48%), Gaps = 32/244 (13%)
Query: 22 CNISTVAMNDGICVCVHVYMLSQLR-SQIMAADQTGEPCWSLVAHNVDEVEKFFKETIEN 80
N+ V DG+ + +M + + +I+ A+ + +L+ NV+E E+F+K +E
Sbjct: 336 LNLFDVLYVDGVSLIDTKFMERRKKLEEIVEANGKVKIAENLITKNVEEAEQFYKRALEM 395
Query: 81 RDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVLIIGGYYGSGRRGGEVAQFLV 140
EG++ K L + +EPG+R KWLK+KP +LD++IIG +G GRR + F++
Sbjct: 396 GHEGLMAKRLDAIYEPGNRGKKWLKIKPTM----ENLDLVIIGAEWGEGRRAHLLGSFIL 451
Query: 141 ALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNN 200
A D F+ +VG+G +D++L L+P K E +
Sbjct: 452 G-----AYDPETGEFLEVGKVGSGFTDDDLVEFTKMLRPLIIKEEGKR------------ 494
Query: 201 SKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQS 260
VWI+ K +I +I+ +S + + ++LRFPR +R DK D ++
Sbjct: 495 ------VWIQP--KVVIEVTYQEIQ--KSPKYRSGFALRFPRYVALREDKGPEDADTIER 544
Query: 261 FVEL 264
+L
Sbjct: 545 IAQL 548
>gi|350411865|ref|XP_003489474.1| PREDICTED: LOW QUALITY PROTEIN: DNA ligase 1-like [Bombus
impatiens]
Length = 945
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 109/218 (50%), Gaps = 27/218 (12%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYIRA-GSDL 117
SL +++V+ F E+++ EG+++K L + +E RS WLKLK +Y+ G L
Sbjct: 725 SLDTSTMEQVQDFLDESVKGNCEGLMVKTLEQDATYEIAKRSRNWLKLKKDYLEGVGDTL 784
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
DV++IGGY G G+R G FL+A D + S C++GTG S+E+L K
Sbjct: 785 DVVVIGGYIGKGKRTGTYGGFLLACY-----DQENEEYQSVCKIGTGFSEEDLQ----KH 835
Query: 178 KPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSIT----SDIRTIRS 229
+F+++ P+ S+Y+ +S PD W E + K LS++ + + I
Sbjct: 836 TEFFKEHIIPQTK--SYYRY--DSSLEPDHWFEPVQVWEIKCADLSLSPVHKAAVGIIDP 891
Query: 230 EVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 267
E SLRFPR R+R DK D Q + +S
Sbjct: 892 E---KGISLRFPRFVRIRDDKNNEDATSAQQVANMYNS 926
>gi|385805348|ref|YP_005841746.1| ATP-dependent DNA ligase [Fervidicoccus fontis Kam940]
gi|383795211|gb|AFH42294.1| ATP-dependent DNA ligase [Fervidicoccus fontis Kam940]
Length = 599
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 108/208 (51%), Gaps = 25/208 (12%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLGSK--WEPGDRSGKWLKLKPEYIRAGSD-LDVLII 122
N +++EK F E I N EG+++K + K ++ G+R W+K K +Y SD +D++++
Sbjct: 394 NAEDLEKMFYEAISNGAEGVMIKSISEKSIYQAGNRGWLWIKYKRDYRSEMSDSVDLVVV 453
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
G +YG G+R G+++ LVA P D F + C+VGTG +DEELD K+ F+
Sbjct: 454 GAFYGKGKRAGKLSTILVA-GYDPDADV----FRTVCKVGTGFTDEELD----KMTEEFK 504
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSI-----ILSITSDIRTIRSEVFS-APY 236
Y + P ++T PDVW+ P+K + L+++ + E+ A
Sbjct: 505 GYIIDHKDPRVISEIT------PDVWL-IPKKVVEVIGAELTLSPLHTCAKGEISKEAGL 557
Query: 237 SLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
S+RFPR R DK D + VE+
Sbjct: 558 SIRFPRFINWRPDKGPEDATTCKELVEM 585
>gi|16905197|gb|AAL31067.1|AC090120_13 putative DNA ligase [Oryza sativa Japonica Group]
gi|31432783|gb|AAP54376.1| DNA ligase, putative, expressed [Oryza sativa Japonica Group]
gi|40539108|gb|AAR87364.1| putative DNA ligase [Oryza sativa Japonica Group]
Length = 810
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 104/198 (52%), Gaps = 21/198 (10%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRA-GSDL 117
S+ +++++E++KF + + EG+++K L + +EP RS WLKLK +Y+ + G L
Sbjct: 593 SITSNDLEEIQKFLDTAVNSSCEGLIIKTLDKDATYEPAKRSNNWLKLKKDYMDSIGDSL 652
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D++ I ++G G+R G FL+A D + + C +GTG S+++L+ L
Sbjct: 653 DLVPIAAFHGRGKRTGVYGSFLLACY-----DEQNEEYQTICNIGTGFSEQQLEERSVSL 707
Query: 178 KPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRSEV-F 232
R PK P ++Y+ + PDVW E E K+ LSI+ R V
Sbjct: 708 ----RTKAIPK--PKAYYRFADTMD--PDVWFEPSEVWEVKAADLSISPVHRAANGIVDP 759
Query: 233 SAPYSLRFPRIDRVRYDK 250
+ SLRFPR+ RVR DK
Sbjct: 760 NKGISLRFPRLLRVRDDK 777
>gi|407416584|gb|EKF37703.1| DNA ligase I, putative [Trypanosoma cruzi marinkellei]
Length = 712
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 111/218 (50%), Gaps = 26/218 (11%)
Query: 41 MLSQLRSQIMAADQTGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGD 98
+L + I AA Q E L +V+E++ F +I++ EG+++K L + + P
Sbjct: 470 ILYSYFTPIHAAFQFAE---HLDGTDVEEIQSFLDRSIKDGCEGLMVKTLKEEAAYTPAK 526
Query: 99 RSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFIS 157
RS WLKLK +Y+ +D LD++ IG YYG G+R G FL+A + + F S
Sbjct: 527 RSHHWLKLKKDYMDGVTDTLDLVPIGAYYGKGKRTGVFGGFLLACYNSDSDE-----FQS 581
Query: 158 FCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSII 217
C++G+G DE+L+++ L+ + P +Y+ ++E+PDVW+E+ +
Sbjct: 582 ICKIGSGFQDEQLESLTQTLQSCVLMEQ------PRYYR----AEEKPDVWLEASNVWEV 631
Query: 218 LSITSDIRTIRSEVF-----SAPYSLRFPRIDRVRYDK 250
+ I + + S +LRFPR RVR DK
Sbjct: 632 KAADLSISPVHFAAYGLVDPSKGIALRFPRFVRVREDK 669
>gi|403171394|ref|XP_003330631.2| DNA ligase 1 [Puccinia graminis f. sp. tritici CRL 75-36-700-3]
gi|375169165|gb|EFP86212.2| DNA ligase 1 [Puccinia graminis f. sp. tritici CRL 75-36-700-3]
Length = 788
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 111/224 (49%), Gaps = 32/224 (14%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDL---GSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLI 121
NV+E++ F +++++ EG+++K L + +EP RS WLK+K +Y+ G LD+++
Sbjct: 562 NVEEIQTFLEQSVKAGCEGLMVKMLDGQSAHYEPSRRSMNWLKVKKDYLAGIGDSLDLVV 621
Query: 122 IGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYF 181
+G Y+G G+R FL+A + P ++Y + C++GTG S+E LD + TKL P
Sbjct: 622 VGAYHGKGKRTAVYGAFLLACYD-PETESYQ----TICKLGTGFSEEVLDCLHTKLHP-- 674
Query: 182 RKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP------ 235
++Y V + +PDVW E K + + +D+ S V+SA
Sbjct: 675 ----LELTVKKNYYDV---GESKPDVWFEP--KLVWEVLAADLSL--SPVYSAAKGLCGD 723
Query: 236 ----YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKG 275
SLRFPR + R DK D + E+ T +
Sbjct: 724 GTRGVSLRFPRYIKERDDKNGEDATSSEQVAEMYKKQASTVDQA 767
>gi|341582659|ref|YP_004763151.1| ATP-dependent DNA ligase [Thermococcus sp. 4557]
gi|340810317|gb|AEK73474.1| ATP-dependent DNA ligase [Thermococcus sp. 4557]
Length = 559
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 105/219 (47%), Gaps = 35/219 (15%)
Query: 48 QIMAADQTGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLK 107
+I++ ++ LV + DE E+F++ +E EG++ K L S +EPG+R KWLK+K
Sbjct: 363 EIISQNERIRLAEQLVTTSADEAEEFYQRALELGHEGLMAKRLDSVYEPGNRGKKWLKIK 422
Query: 108 PEYIRAGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSD 167
P DLD++IIG +G GRR + FLVA A D + F+ +VG+G +D
Sbjct: 423 PTM----EDLDLVIIGAEWGEGRRAHLLGSFLVA-----AFDPHSGEFVPVGKVGSGFTD 473
Query: 168 EELDAVVTKLKPYFRKYE--YPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIR 225
E+L LKP + E Y + P QVT ++ SP+
Sbjct: 474 EDLAEFTRMLKPLIVREEGKYVEIEPKVVIQVTYQEIQK------SPK------------ 515
Query: 226 TIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
+ + ++LRFPR +R DK + ++ +L
Sbjct: 516 ------YESGFALRFPRYVALREDKSPEEADTIERIAQL 548
>gi|226293865|gb|EEH49285.1| DNA ligase [Paracoccidioides brasiliensis Pb18]
Length = 912
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 111/234 (47%), Gaps = 27/234 (11%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLI 121
+++E++ E+++ EG+++K L S +EP RS WLK+K +Y+ G LD+++
Sbjct: 688 DLEEIQTLLDESVKASCEGLMVKMLDTEESGYEPSKRSRNWLKVKKDYLAGIGDSLDLVV 747
Query: 122 IGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYF 181
+G YYG G+R FL+A A P Y + C +GTG S+ L+ + + L P
Sbjct: 748 LGAYYGRGKRTSVYGAFLLA-AYNPTTQNYE----TICNIGTGFSEALLEELHSALSPLV 802
Query: 182 RKYEYPKRAPPSFYQVTNNSKERPDVWIESPE-----KSIILSITSDIRTIRSEVFSAP- 235
P FY ++ K++PDVW E P+ K+ L+++ + E+ +
Sbjct: 803 IDR------PKPFYDHSSVPKDQPDVWFE-PKYVWEVKAADLTLSPRYKAAADEILGSEN 855
Query: 236 -----YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 284
SLRFPR + R DK + ++ ++ GG+ DD
Sbjct: 856 GTAKGISLRFPRYIKSREDKKPDEATTTRTVADMYRKQESVANVAAAKGGVDDD 909
>gi|348520056|ref|XP_003447545.1| PREDICTED: DNA ligase 1-like [Oreochromis niloticus]
Length = 1044
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 110/223 (49%), Gaps = 21/223 (9%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYIRA-GSDL 117
S+ + N D + +F ++++ + EG+++K L + +E RS WLKLK +Y+ G +
Sbjct: 826 SIDSDNTDTIAEFLEQSVRDSCEGLMVKTLEKDATYEIAKRSHNWLKLKKDYLEGVGDTV 885
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D+ +IG Y G G+R G FL+A D F S C++GTG DE+L+
Sbjct: 886 DLCVIGAYLGKGKRTGTYGGFLLACY-----DEENEEFQSVCKIGTGFKDEDLEQHYK-- 938
Query: 178 KPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRSEV-F 232
+ +++ PK P ++Y+V +++ PDVW+++ + K LS++ + V
Sbjct: 939 --FLKEHILPK--PRAYYRVDQSAE--PDVWLDAVQVWEVKCADLSLSPVYKAAMGMVDP 992
Query: 233 SAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKG 275
SLRFPR R+R DK D EL +G
Sbjct: 993 EKGISLRFPRFLRIRDDKKPEDATAAAQIAELYKKQQQIQNQG 1035
>gi|294495751|ref|YP_003542244.1| DNA ligase I, ATP-dependent Dnl1 [Methanohalophilus mahii DSM 5219]
gi|292666750|gb|ADE36599.1| DNA ligase I, ATP-dependent Dnl1 [Methanohalophilus mahii DSM 5219]
Length = 569
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 104/213 (48%), Gaps = 37/213 (17%)
Query: 62 LVAHNVDEVEKFFKETIENRDEGIVLKDLGSK--WEPGDRSGKWLKLKPEYIR-AGSDLD 118
+V+ + ++ FF + +E EGI++K + +K + PG R W+K K EYI D
Sbjct: 373 VVSADFSRIQHFFDDCVEKGMEGIIIKSVKAKSTYRPGKRGWLWVKWKKEYIEDVRETFD 432
Query: 119 VLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLK 178
++I+G YYG GRR G L A+ +R+ + +VGTG DE+ + + LK
Sbjct: 433 LVIVGSYYGKGRRKGSFGALLCAVLNES-----EKRYETLAKVGTGFKDEDFEEINDLLK 487
Query: 179 PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP--- 235
KY K+ + +S +PD +IE ++++ + I SE+ S+P
Sbjct: 488 ----KYSIEKKP----VNILIDSNMQPDNYIEP---AVVIEV------IGSEITSSPSHT 530
Query: 236 ---------YSLRFPRIDRVRYDKPWHDCLDVQ 259
Y+LRFPR R+RYDK D V+
Sbjct: 531 SGQENSGNGYALRFPRFLRIRYDKGPGDATTVE 563
>gi|290972643|ref|XP_002669061.1| ATP dependent DNA ligase [Naegleria gruberi]
gi|284082602|gb|EFC36317.1| ATP dependent DNA ligase [Naegleria gruberi]
Length = 915
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 108/199 (54%), Gaps = 13/199 (6%)
Query: 78 IENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSGRRGGEVA 136
I+ +EG+VLKDL S +EP R WLK+K +Y++ +D +D++++G Y G+G +GG ++
Sbjct: 184 IKKGEEGLVLKDLCSPYEPNAR--HWLKMKKDYLKGMADSVDLVVLGAYLGTGSKGGLMS 241
Query: 137 QFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQ 196
F++ + D ++ C+ G G D+ ++ + +LK ++ P
Sbjct: 242 VFMMG-----SFDKKLGKWRIICKCGNGHDDQTIETLNEELKSNMKRISKDPSLVPDDID 296
Query: 197 VTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCL 256
+ N+ PD ++ P+KS++ I ++ S P S+RFPR+ ++R DK D L
Sbjct: 297 IHTNAL-VPDFIVKDPKKSVVWEIQGAEFSVSSRK-DRPISVRFPRVTKIRDDK---DVL 351
Query: 257 DVQSFVELVHSSNGTTQKG 275
D ++ E++ N + +KG
Sbjct: 352 DHTNYQEIIKLKNESNRKG 370
>gi|449456160|ref|XP_004145818.1| PREDICTED: DNA ligase 1-like [Cucumis sativus]
Length = 801
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 104/198 (52%), Gaps = 21/198 (10%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRA-GSDL 117
+++ ++++E++KF +++ EG+++K L + +EP RS WLKLK +YI + G L
Sbjct: 585 AIITNDLEEIQKFLDASVDQSCEGLIIKTLNRDATYEPSKRSHNWLKLKKDYIDSIGDSL 644
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D++ I ++G G+R G FL+A D F S C++GTG S+ L+ L
Sbjct: 645 DLVPIAAFHGRGKRTGVYGAFLLACY-----DNDNEEFQSICKIGTGFSEAMLEERSASL 699
Query: 178 KPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRSEVFS 233
R P+ P S+Y+ + PDVW E E K+ L+I+ R V S
Sbjct: 700 ----RSKVIPE--PKSYYRYGDTIN--PDVWFEPTEVWEVKAADLTISPVHRAGVGIVDS 751
Query: 234 -APYSLRFPRIDRVRYDK 250
SLRFPR+ RVR DK
Sbjct: 752 DKGISLRFPRLVRVREDK 769
>gi|449496284|ref|XP_004160093.1| PREDICTED: LOW QUALITY PROTEIN: DNA ligase 1-like [Cucumis sativus]
Length = 801
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 104/198 (52%), Gaps = 21/198 (10%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRA-GSDL 117
+++ ++++E++KF +++ EG+++K L + +EP RS WLKLK +YI + G L
Sbjct: 585 AIITNDLEEIQKFLDASVDQSCEGLIIKTLNRDATYEPSKRSHNWLKLKKDYIDSIGDSL 644
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D++ I ++G G+R G FL+A D F S C++GTG S+ L+ L
Sbjct: 645 DLVPIAAFHGRGKRTGVYGAFLLACY-----DNDNEEFQSICKIGTGFSEAMLEERSASL 699
Query: 178 KPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRSEVFS 233
R P+ P S+Y+ + PDVW E E K+ L+I+ R V S
Sbjct: 700 ----RSKVIPE--PKSYYRYGDTIN--PDVWFEPTEVWEVKAADLTISPVHRAGVGIVDS 751
Query: 234 -APYSLRFPRIDRVRYDK 250
SLRFPR+ RVR DK
Sbjct: 752 DKGISLRFPRLVRVREDK 769
>gi|260801006|ref|XP_002595387.1| hypothetical protein BRAFLDRAFT_69217 [Branchiostoma floridae]
gi|229280633|gb|EEN51399.1| hypothetical protein BRAFLDRAFT_69217 [Branchiostoma floridae]
Length = 952
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 108/214 (50%), Gaps = 25/214 (11%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRA-GSDL 117
S+V+ N +E+ F +I++ EG+++K L + +E RS WLKLK +Y+ G L
Sbjct: 730 SMVSGNTEEIAVFLDASIKDSCEGLMVKTLDKDATYEIAKRSHNWLKLKKDYLDGVGDTL 789
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
DV+ IGG+ G+G+R G+ FL+A F S C++GTG DEEL+
Sbjct: 790 DVVPIGGFLGTGKRTGKYGGFLLACYSE-----EDEEFQSICKIGTGFKDEELEQHTE-- 842
Query: 178 KPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRSEVFS 233
+F+ + K P S+Y+ +S PD W ++ + K LSI+ + +E
Sbjct: 843 --FFKNHVVDK--PKSYYRY--DSSVEPDHWFDAVQVWEIKCADLSISPVHKA--AEGIV 894
Query: 234 AP---YSLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
P SLRFPR R+R DK + Q E+
Sbjct: 895 DPEKGISLRFPRFLRIRDDKKPEEATSAQQVAEM 928
>gi|412992688|emb|CCO18668.1| predicted protein [Bathycoccus prasinos]
Length = 850
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 103/194 (53%), Gaps = 19/194 (9%)
Query: 63 VAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLI 121
+ +V+E++ F E+I EG+++K + + +EP RS WLKLK +Y+ G LD++
Sbjct: 643 TSRDVEELQVFLDESIAANTEGLIVKTMDATYEPSKRSLNWLKLKKDYMEGCGDSLDLVP 702
Query: 122 IGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYF 181
IG ++G G+R G FL+A + + F + C++GTG S+ +L+ + L+P+
Sbjct: 703 IGAWHGRGKRTGVYGAFLLACYDEDGEE-----FQTICKIGTGFSEIDLETLSKALEPHL 757
Query: 182 RKYEYPKRAPPSFYQVTNNSKERPDVWIESP----EKSIILSITSDIRTIRSEV-FSAPY 236
+ AP S+Y+ + PD+W ++ K+ LSI+ + V +
Sbjct: 758 IE------APRSYYKYPEGME--PDLWFDAKLVWEVKAADLSISPTHKAAMGLVDPNKGI 809
Query: 237 SLRFPRIDRVRYDK 250
+LRFPR R R DK
Sbjct: 810 ALRFPRFLRSRDDK 823
>gi|212224666|ref|YP_002307902.1| ATP-dependent DNA ligase [Thermococcus onnurineus NA1]
gi|83338493|gb|ABC11973.1| thermostable DNA ligase [Thermococcus onnurineus NA1]
gi|212009623|gb|ACJ17005.1| thermostable DNA ligase [Thermococcus onnurineus NA1]
Length = 562
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 100/206 (48%), Gaps = 31/206 (15%)
Query: 59 CWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLD 118
LV V+E E+F+K+ +E EG++ K L S +EPG+R KWLK+KP DLD
Sbjct: 377 AQQLVTKKVEEAEEFYKKALELGHEGLMAKRLDSVYEPGNRGKKWLKIKPTM----EDLD 432
Query: 119 VLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLK 178
++IIG +G GRR + FLVA A D + F+ +VG+G +DE+L LK
Sbjct: 433 LVIIGAEWGEGRRAHLLGSFLVA-----AYDPHSGEFVPVGKVGSGFTDEDLVEFTKMLK 487
Query: 179 PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSL 238
P + K ++E K +I +I+ +S + + ++L
Sbjct: 488 PLI---------------IGGEGK-----FVEIEPKVVIQVTYQEIQ--KSPKYRSGFAL 525
Query: 239 RFPRIDRVRYDKPWHDCLDVQSFVEL 264
RFPR +R DK + ++ +L
Sbjct: 526 RFPRYVALREDKSPEEADTIERIAQL 551
>gi|305662687|ref|YP_003858975.1| ATP-dependent DNA ligase I [Ignisphaera aggregans DSM 17230]
gi|304377256|gb|ADM27095.1| DNA ligase I, ATP-dependent Dnl1 [Ignisphaera aggregans DSM 17230]
Length = 604
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 116/233 (49%), Gaps = 34/233 (14%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRAGSD-L 117
++ +N E+E FF + +E EG+V+K LG S ++ G R W+K K +Y +D +
Sbjct: 389 GMIVNNTAELETFFLKAVEAGCEGLVVKSLGRDSVYQAGVRGWLWIKYKRDYKSEMTDTV 448
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D++++G ++G G+R G L+A A P DT F + C+VGTG +DEEL + KL
Sbjct: 449 DLVVVGAFHGRGKRAGTYGALLLA-AYDPESDT----FKTVCKVGTGFTDEELAELPKKL 503
Query: 178 KPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTI-------RSE 230
+PY R P ++V +S DVW E ++++ +T T+ R
Sbjct: 504 EPY--------RLPHKHHRV--DSDIEADVWFEP---AVVMEVTGAELTLSPLHTCCRGM 550
Query: 231 V-FSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS-----SNGTTQKGKE 277
V S+RFPR R R DK + + +E+ + S TT G+E
Sbjct: 551 VKQGVGISIRFPRFVRWRPDKSPKEITTTKEILEMYYRQLRKVSQTTTGVGEE 603
>gi|14520759|ref|NP_126234.1| ATP-dependent DNA ligase [Pyrococcus abyssi GE5]
gi|327507708|sp|P0CL75.1|DNLI_PYRAB RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|5457975|emb|CAB49465.1| lig DNA ligase [Pyrococcus abyssi GE5]
gi|380741298|tpe|CCE69932.1| TPA: ATP-dependent DNA ligase [Pyrococcus abyssi GE5]
Length = 559
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 117/244 (47%), Gaps = 32/244 (13%)
Query: 22 CNISTVAMNDGICVCVHVYMLSQLR-SQIMAADQTGEPCWSLVAHNVDEVEKFFKETIEN 80
N+ V DG+ + +M + + +I+ + + +L+ NV+E E+F+K +E
Sbjct: 336 LNLFDVLYVDGVSLIDTKFMERRKKLEEIVETNGKVKIAENLITKNVEEAEQFYKRALEM 395
Query: 81 RDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVLIIGGYYGSGRRGGEVAQFLV 140
EG++ K L + +EPG+R KWLK+KP +LD++IIG +G GRR + F++
Sbjct: 396 GHEGLMAKRLDAVYEPGNRGKKWLKIKPTM----ENLDLVIIGAEWGEGRRAHLLGSFIL 451
Query: 141 ALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNN 200
A D F+ +VG+G +D++L LKP K E +
Sbjct: 452 G-----AYDPETGEFLEVGKVGSGFTDDDLVEFTKMLKPLIIKEEGKR------------ 494
Query: 201 SKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQS 260
VWI+ K +I +I+ +S + + ++LRFPR +R DK D ++
Sbjct: 495 ------VWIQP--KVVIEVTYQEIQ--KSPKYRSGFALRFPRYVALREDKGPEDADTIER 544
Query: 261 FVEL 264
+L
Sbjct: 545 IAQL 548
>gi|255941662|ref|XP_002561600.1| Pc16g13010 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211586223|emb|CAP93971.1| Pc16g13010 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 906
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 112/231 (48%), Gaps = 24/231 (10%)
Query: 67 VDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLII 122
+DE+++ + +++ EG+++K L S +EP RS WLK+K +Y+ G LD++++
Sbjct: 684 LDEIQELLEASVKASCEGLMVKMLDTAESGYEPSMRSRNWLKVKKDYLAGVGDSLDLVVL 743
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
G YYG G+R FL+A A P+ DTY + C +GTG S+ L+ + L P
Sbjct: 744 GAYYGRGKRTSVYGAFLLA-AYNPSNDTYE----TICNIGTGFSEVLLEELHQTLVPLV- 797
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIES----PEKSIILSITSDIRTIRSEVFSAP--- 235
+ PK FY + K++PDVW E K+ L+++ + E
Sbjct: 798 -IDRPK----PFYTHSTVPKDQPDVWFEPRLVWEVKTADLTLSPRYQAAADEFQGTTGGG 852
Query: 236 --YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 284
SLRFPR + R DK + ++ E+ T+ GG+ DD
Sbjct: 853 KGVSLRFPRYIKSRDDKKPDEATTTRAVAEMYRKQEAVTKDTTSKGGVDDD 903
>gi|320170916|gb|EFW47815.1| ligase I [Capsaspora owczarzaki ATCC 30864]
Length = 981
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 111/224 (49%), Gaps = 21/224 (9%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRA-GSDL 117
S+ N +++E+F ++I+ EG+++K L + +E RS WLKLK +Y+ G L
Sbjct: 762 SMDGTNTEQIEEFLDQSIKAGCEGLMVKTLEQEATYEIAKRSHNWLKLKKDYLDGVGDTL 821
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D+++IGGY G G+R G FL+A D + S C++GTG SDE+L T
Sbjct: 822 DLVVIGGYRGKGKRTGFYGGFLLACY-----DEENEEYQSICKIGTGFSDEDLQRHST-- 874
Query: 178 KPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRSEV-F 232
+F+ ++ P S+Y+ + PD W ++ + K+ LSI+ + V
Sbjct: 875 --FFK--DHVISGPKSYYRADDTLA--PDDWFDTVQVWEVKAADLSISPVHKAAAGLVDP 928
Query: 233 SAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGK 276
SLRFPR R+R DK + ++ S Q+GK
Sbjct: 929 EKGISLRFPRFLRIRDDKSTEQATNASQVADMYRSQQLLNQQGK 972
>gi|134080257|emb|CAK97160.1| unnamed protein product [Aspergillus niger]
Length = 884
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 109/231 (47%), Gaps = 24/231 (10%)
Query: 67 VDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLII 122
+DE++ ++++ EG+++K L S +EP RS WLK+K +Y+ G LD++++
Sbjct: 662 LDEIQTLLDDSVKASCEGLMVKMLDTEESGYEPSKRSRNWLKVKKDYLSGVGDSLDLVVL 721
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
G Y+G G+R FL+A A ++ + + + C +GTG S+ L+ L P
Sbjct: 722 GAYHGRGKRTSVYGAFLLA-----AYNSSTQTYETICNIGTGFSEAVLEEFYNALSPL-- 774
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIES----PEKSIILSITSDIRTIRSEVFSAP--- 235
+ PK FY +N K++PDVW E K+ L+++ + E
Sbjct: 775 TIDRPK----PFYSHSNVPKDQPDVWFEPRLVWEVKTADLTLSPRYKAAADEFMGTTGGG 830
Query: 236 --YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 284
SLRFPR + R DK ++ E+ ++ GG+ DD
Sbjct: 831 KGVSLRFPRFIKSRDDKKPEQATTTRAVAEMYRKQEAVQKENAGKGGVDDD 881
>gi|384245430|gb|EIE18924.1| ATP-dependent DNA ligase [Coccomyxa subellipsoidea C-169]
Length = 651
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 109/234 (46%), Gaps = 39/234 (16%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDV 119
S + +V+E+ F E++ EG+++K + S +EP RS WLKLK +Y+ G LDV
Sbjct: 436 SYTSTDVEELGTFLNESVAAGTEGLIVKTMDSTYEPSRRSLHWLKLKKDYLEGVGDTLDV 495
Query: 120 LIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 179
+IG ++G G+R G FL+A+ P+ F + ++GTG S+E+L +L
Sbjct: 496 AVIGAWFGKGKRSGVFGAFLLAVYN---PEG--EEFQTISKIGTGFSEEQLKQFSEEL-- 548
Query: 180 YFRKYEYPKRAPPSFYQVTNNSKERPDVWIE--------------SPEKSIILSITSDIR 225
R + P P +Y+ + PD+W + SP L + +
Sbjct: 549 --RLHTIPTAKP--YYRYSETL--LPDIWFDAKTVWEVKCADFSISPRHKAALGLADPDK 602
Query: 226 TIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTT--QKGKE 277
I S+RFPR+ +VR DK D + E+ T+ QKGK+
Sbjct: 603 GI---------SIRFPRLVKVRDDKTPEDATSAEQVAEMYFKQALTSGQQKGKQ 647
>gi|357140737|ref|XP_003571920.1| PREDICTED: DNA ligase 1-like [Brachypodium distachyon]
Length = 918
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 106/210 (50%), Gaps = 38/210 (18%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYI-RAGSDL 117
++ +++++E++KF + + EG+++K L + +EP RS WLKLK +Y+ G L
Sbjct: 700 AITSNDLEEIQKFLDVAVNSSCEGLIIKTLDKDATYEPAKRSNNWLKLKKDYMDSVGDSL 759
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELD------ 171
D++ I ++G G+R G FL+A D + + C +GTG S+++L+
Sbjct: 760 DLVPIAAFHGRGKRTGVYGSFLLACY-----DEQNEEYQTICNIGTGFSEQQLEERSTSL 814
Query: 172 --AVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIR 225
V++K K Y+R F T+ PDVW E E K+ LSI+ R
Sbjct: 815 RSKVISKPKAYYR-----------FADTTD-----PDVWFEPSEVWEVKAADLSISPVHR 858
Query: 226 TIRSEV-FSAPYSLRFPRIDRVRYDK-PWH 253
V + SLRFPR+ RVR DK P H
Sbjct: 859 AANGIVDPNKGISLRFPRLLRVRDDKNPEH 888
>gi|350636886|gb|EHA25244.1| hypothetical protein ASPNIDRAFT_186220 [Aspergillus niger ATCC
1015]
Length = 915
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 109/231 (47%), Gaps = 24/231 (10%)
Query: 67 VDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLII 122
+DE++ ++++ EG+++K L S +EP RS WLK+K +Y+ G LD++++
Sbjct: 693 LDEIQTLLDDSVKASCEGLMVKMLDTEESGYEPSKRSRNWLKVKKDYLSGVGDSLDLVVL 752
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
G Y+G G+R FL+A A ++ + + + C +GTG S+ L+ L P
Sbjct: 753 GAYHGRGKRTSVYGAFLLA-----AYNSSTQTYETICNIGTGFSEAVLEEFYNALSPL-- 805
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIES----PEKSIILSITSDIRTIRSEVFSAP--- 235
+ PK FY +N K++PDVW E K+ L+++ + E
Sbjct: 806 TIDRPK----PFYSHSNVPKDQPDVWFEPRLVWEVKTADLTLSPRYKAAADEFMGTTGGG 861
Query: 236 --YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 284
SLRFPR + R DK ++ E+ ++ GG+ DD
Sbjct: 862 KGVSLRFPRFIKSRDDKKPEQATTTRAVAEMYRKQEAVQKENAGKGGVDDD 912
>gi|326498483|dbj|BAJ98669.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 937
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 103/205 (50%), Gaps = 14/205 (6%)
Query: 68 DEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGG 124
++++ TI EG+VLK+ +EP R WLK+K +Y+ G+ D++++G
Sbjct: 573 NDLKHLINFTIAEGLEGLVLKNPDGAYEPNKRH--WLKVKKDYLMEGTMADTADLVVLGA 630
Query: 125 YYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKY 184
YYG+G++GG ++ FL+ + P D R+ + + G G D L+ + KP K
Sbjct: 631 YYGTGKKGGLMSVFLLGCHD-PESD----RWYTVAKCGNGFDDATLEKLQDDFKPNMTKI 685
Query: 185 EYPKRAPPSFYQVTNNSKER-PDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRI 243
+ P + N S+E PD + P+KS + IT + + + S+RFPR+
Sbjct: 686 S---KNPNQVPKWCNISRELVPDFIVIDPKKSPVWEITGAEFSKSKQHTANGISIRFPRV 742
Query: 244 DRVRYDKPWHDCLDVQSFVELVHSS 268
+VR DK W + ++Q EL S
Sbjct: 743 TKVREDKTWKEATNLQYLTELFEKS 767
>gi|218184789|gb|EEC67216.1| hypothetical protein OsI_34114 [Oryza sativa Indica Group]
gi|222613048|gb|EEE51180.1| hypothetical protein OsJ_31972 [Oryza sativa Japonica Group]
Length = 627
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 104/198 (52%), Gaps = 21/198 (10%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRA-GSDL 117
S+ +++++E++KF + + EG+++K L + +EP RS WLKLK +Y+ + G L
Sbjct: 410 SITSNDLEEIQKFLDTAVNSSCEGLIIKTLDKDATYEPAKRSNNWLKLKKDYMDSIGDSL 469
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D++ I ++G G+R G FL+A D + + C +GTG S+++L+ L
Sbjct: 470 DLVPIAAFHGRGKRTGVYGSFLLACY-----DEQNEEYQTICNIGTGFSEQQLEERSVSL 524
Query: 178 KPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRSEV-F 232
R PK P ++Y+ + PDVW E E K+ LSI+ R V
Sbjct: 525 ----RTKAIPK--PKAYYRFADTMD--PDVWFEPSEVWEVKAADLSISPVHRAANGIVDP 576
Query: 233 SAPYSLRFPRIDRVRYDK 250
+ SLRFPR+ RVR DK
Sbjct: 577 NKGISLRFPRLLRVRDDK 594
>gi|317033374|ref|XP_001395539.2| DNA ligase Cdc9 [Aspergillus niger CBS 513.88]
Length = 894
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 109/231 (47%), Gaps = 24/231 (10%)
Query: 67 VDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLII 122
+DE++ ++++ EG+++K L S +EP RS WLK+K +Y+ G LD++++
Sbjct: 672 LDEIQTLLDDSVKASCEGLMVKMLDTEESGYEPSKRSRNWLKVKKDYLSGVGDSLDLVVL 731
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
G Y+G G+R FL+A A ++ + + + C +GTG S+ L+ L P
Sbjct: 732 GAYHGRGKRTSVYGAFLLA-----AYNSSTQTYETICNIGTGFSEAVLEEFYNALSPL-- 784
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIES----PEKSIILSITSDIRTIRSEVFSAP--- 235
+ PK FY +N K++PDVW E K+ L+++ + E
Sbjct: 785 TIDRPK----PFYSHSNVPKDQPDVWFEPRLVWEVKTADLTLSPRYKAAADEFMGTTGGG 840
Query: 236 --YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 284
SLRFPR + R DK ++ E+ ++ GG+ DD
Sbjct: 841 KGVSLRFPRFIKSRDDKKPEQATTTRAVAEMYRKQEAVQKENAGKGGVDDD 891
>gi|255719318|ref|XP_002555939.1| KLTH0H01408p [Lachancea thermotolerans]
gi|238941905|emb|CAR30077.1| KLTH0H01408p [Lachancea thermotolerans CBS 6340]
Length = 723
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 105/215 (48%), Gaps = 20/215 (9%)
Query: 62 LVAHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDL 117
+ ++DE++ + + + + EG+++K L S +EP RS WLKLK +Y++ G L
Sbjct: 519 VTTMSLDELQHYLDQAVRDCCEGLMVKILEGEESHYEPSKRSRNWLKLKKDYLQGVGDSL 578
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D+ ++G YYG G+R G FL+ + + + + + C++GTG S+E L + +L
Sbjct: 579 DLCVLGAYYGRGKRTGTYGGFLLGCYNQDSGE-----YETCCKIGTGFSEEMLQTLFDRL 633
Query: 178 KPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSI---TSDIRTIRSEVFSA 234
P P P +FY ++ PDVW E +L+ S + + +
Sbjct: 634 SP----TAIP--TPKAFY--VHSESAPPDVWFEPTLLFEVLTADLSLSPVYKAGTSSYGK 685
Query: 235 PYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSN 269
SLRFPR R+R DK + + VE S +
Sbjct: 686 GISLRFPRFIRLRDDKTPEEATSSEQVVEFYESQS 720
>gi|193084345|gb|ACF10002.1| ATP-dependent DNA ligase [uncultured marine crenarchaeote
SAT1000-49-D2]
Length = 585
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 111/263 (42%), Gaps = 54/263 (20%)
Query: 34 CVCVHVYMLSQLRSQIMAADQTGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSK 93
C+ + ++ QI+ D + L N +E+E F + +I EG++LK +
Sbjct: 352 CLNLEYSERRKILEQIIHEDNFSKLVPMLFVKNENEIEDFLENSINAGCEGLMLKTPSAP 411
Query: 94 WEPGDRSGKWLKLKPEYIR-AGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYP 152
+ G R WLKLK EY G D+++IG Y+G GRR G L+A P D +P
Sbjct: 412 YRAGTRGSNWLKLKREYRNELGDSFDLIVIGAYFGRGRRTGLYGTLLLA-TYNPEKDNFP 470
Query: 153 RRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNN-----------S 201
S C+VGTG +DE LD YQ+ +N S
Sbjct: 471 ----SICKVGTGFTDESLD---------------------QLYQILSNNVTLKKNSRIVS 505
Query: 202 KERPDVWIESPEKSIILSITSDIR----------TIRSEVFSAPYSLRFPRI-DRVRYDK 250
+ DVW E K ++ + S+I IR S+ ++LRFP+ ++RY+K
Sbjct: 506 EMEADVWFEP--KLVLEIVGSEITLSPIHKTGLDLIRK---SSGFALRFPKFTGKIRYEK 560
Query: 251 PWHDCLDVQSFVELVHSSNGTTQ 273
D + + L + Q
Sbjct: 561 AVEDASTAEEVLALYKGQSKINQ 583
>gi|57642075|ref|YP_184553.1| ATP-dependent DNA ligase [Thermococcus kodakarensis KOD1]
gi|10566815|dbj|BAB15949.1| DNA ligase [Thermococcus kodakaraensis]
gi|57160399|dbj|BAD86329.1| ATP-dependent DNA ligase [Thermococcus kodakarensis KOD1]
Length = 562
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 99/203 (48%), Gaps = 31/203 (15%)
Query: 62 LVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVLI 121
L+ V+E E F++ +E EG++ K L S +EPG+R KWLK+KP +LD++I
Sbjct: 380 LITKKVEEAEAFYRRALELGHEGLMAKRLDSIYEPGNRGKKWLKIKPTM----ENLDLVI 435
Query: 122 IGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYF 181
IG +G GRR + FLVA A D + F+ +VG+G +DE+L LKPY
Sbjct: 436 IGAEWGEGRRAHLLGSFLVA-----AYDPHSGEFLPVGKVGSGFTDEDLVEFTKMLKPYI 490
Query: 182 RKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFP 241
+ E ++E K +I +I+ +S + + ++LRFP
Sbjct: 491 VRQE--------------------GKFVEIEPKFVIEVTYQEIQ--KSPKYKSGFALRFP 528
Query: 242 RIDRVRYDKPWHDCLDVQSFVEL 264
R +R DK + ++ EL
Sbjct: 529 RYVALREDKSPEEADTIERVAEL 551
>gi|119480745|ref|XP_001260401.1| DNA ligase Cdc9, putative [Neosartorya fischeri NRRL 181]
gi|119408555|gb|EAW18504.1| DNA ligase Cdc9, putative [Neosartorya fischeri NRRL 181]
Length = 840
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 113/233 (48%), Gaps = 24/233 (10%)
Query: 65 HNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVL 120
++++E++ E+++ EG+++K L S +EP RS WLK+K +Y+ G LD++
Sbjct: 616 NDLEEIQNLLDESVKASCEGLMVKMLDTEESGYEPSKRSRNWLKVKKDYLAGVGDSLDLV 675
Query: 121 IIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPY 180
++G Y+G G+R FL+A A ++ + + + C +GTG S+ L+ + +L P
Sbjct: 676 VLGAYHGRGKRTSVYGAFLLA-----AYNSSTQTYETICNIGTGFSEALLEELYKELSPL 730
Query: 181 FRKYEYPKRAPPSFYQVTNNSKERPDVWIES----PEKSIILSITSDIRTIRSEV----- 231
+ PK FY +N K++PDVW E K+ L+++ + E
Sbjct: 731 --TIDRPK----PFYSHSNVPKDQPDVWFEPRLVWEVKTADLTLSPRYKAAADEFVGTTG 784
Query: 232 FSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 284
SLRFPR + R DK ++ E+ ++ GG+ DD
Sbjct: 785 GGKGVSLRFPRFIKSRDDKKPEQATTTRAVAEMYRKQEAVLKENTGKGGVDDD 837
>gi|14423676|sp|Q9HHC4.2|DNLI_PYRKO RecName: Full=DNA ligase; AltName: Full=Lig(Tk); AltName:
Full=Polydeoxyribonucleotide synthase [ATP]
Length = 559
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 99/203 (48%), Gaps = 31/203 (15%)
Query: 62 LVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVLI 121
L+ V+E E F++ +E EG++ K L S +EPG+R KWLK+KP +LD++I
Sbjct: 377 LITKKVEEAEAFYRRALELGHEGLMAKRLDSIYEPGNRGKKWLKIKPTM----ENLDLVI 432
Query: 122 IGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYF 181
IG +G GRR + FLVA A D + F+ +VG+G +DE+L LKPY
Sbjct: 433 IGAEWGEGRRAHLLGSFLVA-----AYDPHSGEFLPVGKVGSGFTDEDLVEFTKMLKPYI 487
Query: 182 RKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFP 241
+ E ++E K +I +I+ +S + + ++LRFP
Sbjct: 488 VRQE--------------------GKFVEIEPKFVIEVTYQEIQ--KSPKYKSGFALRFP 525
Query: 242 RIDRVRYDKPWHDCLDVQSFVEL 264
R +R DK + ++ EL
Sbjct: 526 RYVALREDKSPEEADTIERVAEL 548
>gi|358369869|dbj|GAA86482.1| DNA ligase (Polydeoxyribonucleotide synthase [ATP]) [Aspergillus
kawachii IFO 4308]
Length = 889
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 109/231 (47%), Gaps = 24/231 (10%)
Query: 67 VDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLII 122
+DE++ ++++ EG+++K L S +EP RS WLK+K +Y+ G LD++++
Sbjct: 667 LDEIQTLLDDSVKASCEGLMVKMLDTEESGYEPSKRSRNWLKVKKDYLSGVGDSLDLVVL 726
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
G Y+G G+R FL+A A ++ + + + C +GTG S+ L+ L P
Sbjct: 727 GAYHGRGKRTSVYGAFLLA-----AYNSSTQTYETICNIGTGFSEAILEEFYNALSPL-- 779
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIES----PEKSIILSITSDIRTIRSEVFSAP--- 235
+ PK FY +N K++PDVW E K+ L+++ + E
Sbjct: 780 TIDRPK----PFYSHSNVPKDQPDVWFEPRLVWEVKTADLTLSPRYKAAADEFMGTTGGG 835
Query: 236 --YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 284
SLRFPR + R DK ++ E+ ++ GG+ DD
Sbjct: 836 KGVSLRFPRFIKSRDDKKPEQATTTRAVAEMYRKQEAVQKENAGKGGVDDD 886
>gi|389852928|ref|YP_006355162.1| ATP-dependent DNA ligase [Pyrococcus sp. ST04]
gi|388250234|gb|AFK23087.1| ATP-dependent DNA ligase [Pyrococcus sp. ST04]
Length = 559
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 102/205 (49%), Gaps = 33/205 (16%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVL 120
+L+ V+E E F+K+ +E EG++ K L + +EPG+R KWLK+KP +LD++
Sbjct: 376 NLITKKVEEAEAFYKKALEMGHEGLMAKRLDATYEPGNRGKKWLKIKPTM----ENLDLV 431
Query: 121 IIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPY 180
IIG +G GRR + F++ A D F+ +VG+G +DE+L LKP
Sbjct: 432 IIGAEWGEGRRAHLLGSFILG-----AYDPETGEFLEVGKVGSGFTDEDLVEFTKMLKPL 486
Query: 181 FRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSIT-SDIRTIRSEVFSAPYSLR 239
K E + VWIE I++ +T +I+ +S + + ++LR
Sbjct: 487 IIKEEGKR------------------VWIEP---KIVIEVTYQEIQ--KSPKYKSGFALR 523
Query: 240 FPRIDRVRYDKPWHDCLDVQSFVEL 264
FPR +R DK D ++ +L
Sbjct: 524 FPRYVALRDDKGPEDADTIERIAQL 548
>gi|156033275|ref|XP_001585474.1| hypothetical protein SS1G_13713 [Sclerotinia sclerotiorum 1980]
gi|154699116|gb|EDN98854.1| hypothetical protein SS1G_13713 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 914
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 103/203 (50%), Gaps = 25/203 (12%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSD 116
S+ +DE++ F E+++ EG+++K L S +EP RS WLK+K +Y+ G
Sbjct: 689 SMNGQEIDEIQTFLDESVKASCEGLMVKMLDGTESGYEPSKRSRNWLKIKKDYLSGIGDS 748
Query: 117 LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTK 176
LD++++G YYG G+R FL+A P DTY + C +GTG S++ L+ + +
Sbjct: 749 LDLVVLGAYYGRGKRTSVYGAFLLA-CHNPHTDTYE----TICNIGTGFSEQVLEELHAQ 803
Query: 177 LKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE-----KSIILSITSDIRTIRSEV 231
L P FY ++ ++ +PDVW E P+ K+ L+++ + E
Sbjct: 804 LSAIVIDR------PKPFYSHSSGNQHQPDVWFE-PKYVWEVKTADLTLSPRYKAGCKEG 856
Query: 232 F----SAPYSLRFPRIDRVRYDK 250
SLRFPR ++R DK
Sbjct: 857 VDKGGEKGISLRFPRFIKIRDDK 879
>gi|258574125|ref|XP_002541244.1| DNA ligase (Polydeoxyribonucleotide synthase [ATP]) [Uncinocarpus
reesii 1704]
gi|237901510|gb|EEP75911.1| DNA ligase (Polydeoxyribonucleotide synthase [ATP]) [Uncinocarpus
reesii 1704]
Length = 941
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 107/235 (45%), Gaps = 27/235 (11%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLI 121
NV+E++ E++++ EG+++K L S +EP RS WLK+K +Y+ G LD+++
Sbjct: 715 NVEEIQNLLDESVKSSCEGLMVKMLDTDESGYEPSKRSRNWLKVKKDYLAGIGDSLDLVV 774
Query: 122 IGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYF 181
IG Y+G G+R FL+A A P + Y + C +GTG S+ L+ + L P
Sbjct: 775 IGAYFGKGKRTSVYGAFLLA-AYNPNTENYE----TICNIGTGFSESLLEELHKTLSP-- 827
Query: 182 RKYEYPKRAPPSFYQVTNNSKERPDVWIES----PEKSIILSITSDIRTIRSEVFSAP-- 235
P FY ++ K++PDVW E K+ L+I+ R EV
Sbjct: 828 ----LSISQPKPFYSHSSVPKDQPDVWFEPRLVWEVKAADLTISPRYRCASDEVMGMTGT 883
Query: 236 ------YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 284
SLRFPR + R DK + E+ T+ K DD
Sbjct: 884 GADGKGVSLRFPRYIKSRDDKKPDQASTTRMVAEMYRKQESVTKDDKGKKAADDD 938
>gi|223478331|ref|YP_002582768.1| ATP-dependent DNA ligase [Thermococcus sp. AM4]
gi|214033557|gb|EEB74384.1| ATP-dependent DNA ligase [Thermococcus sp. AM4]
Length = 562
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 99/203 (48%), Gaps = 31/203 (15%)
Query: 62 LVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVLI 121
LV VDE E+F+K +E EG++ K L S +EPG+R KWLK+KP +LD++I
Sbjct: 380 LVTKKVDEAEEFYKRALELGHEGLMAKRLDSVYEPGNRGKKWLKIKPTM----ENLDLVI 435
Query: 122 IGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYF 181
IG +G GRR + FLVA A D F+ +VG+G +DE+L LKP
Sbjct: 436 IGAEWGEGRRAHLLGSFLVA-----AYDPESGEFVPVGKVGSGFTDEDLIEFTKMLKPLI 490
Query: 182 RKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFP 241
+ E F ++ +P V IE + I +S + + ++LRFP
Sbjct: 491 VREE------GKFVEI------QPKVVIEVTYQEI----------QKSPKYKSGFALRFP 528
Query: 242 RIDRVRYDKPWHDCLDVQSFVEL 264
R +R DK + ++ +L
Sbjct: 529 RYVALREDKSPEEADTIERVAQL 551
>gi|353240611|emb|CCA72472.1| probable CDC9-DNA ligase I [Piriformospora indica DSM 11827]
Length = 826
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 107/231 (46%), Gaps = 30/231 (12%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLGSK---WEPGDRSGKWLKLKPEYIRA-GSDLDVLI 121
++++ F +E++++ EG+++K L S +EP RS WLKLK +Y+ G LD+++
Sbjct: 611 TTEQIQTFLEESVKDGCEGLMVKMLQSDESFYEPSRRSVNWLKLKKDYLAGVGDSLDLVV 670
Query: 122 IGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYF 181
+GGY+G G+R FL+A D + + C++GTG SDE L LK
Sbjct: 671 VGGYHGKGKRTAVYGAFLLACY-----DADNEEWQTICKIGTGFSDEALQEHAKTLK--- 722
Query: 182 RKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP------ 235
+ + +PDVW E K + + +D+ S +++A
Sbjct: 723 ------ELEISALRGDIKAGGAKPDVWFEP--KVVWEVLAADLSL--SPIYTAAQGLVEQ 772
Query: 236 --YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 284
SLRFPR RVR DK D + E+ KGK+ G DD
Sbjct: 773 RGISLRFPRFIRVRDDKSADDATGPEQIAEMYQRQALAQSKGKKGKGDADD 823
>gi|14423675|sp|Q9HH07.1|DNLI_THEFM RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|12056098|emb|CAC21199.1| DNA ligase [Thermococcus fumicolans]
Length = 559
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 98/208 (47%), Gaps = 35/208 (16%)
Query: 59 CWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLD 118
LV +E E+F++ +E EG++ K L S +EPG+R KWLK+KP DLD
Sbjct: 374 AQQLVTKKAEEAEEFYRRALELGHEGLMAKRLDSVYEPGNRGKKWLKIKPTM----EDLD 429
Query: 119 VLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLK 178
++IIG +G GRR + FLVA A D + F+ +VG+G +DE+L LK
Sbjct: 430 LVIIGAEWGEGRRAHLLGSFLVA-----AYDQHRGEFVPVGKVGSGFTDEDLAEFTKMLK 484
Query: 179 PYFRKYE--YPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPY 236
P + E Y + P QVT ++ SP+ + + +
Sbjct: 485 PLIVREEGKYVEIEPRVVIQVTYQEIQK------SPK------------------YESGF 520
Query: 237 SLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
+LRFPR +R DK + ++ EL
Sbjct: 521 ALRFPRYVALREDKSPEEADTIERISEL 548
>gi|328871756|gb|EGG20126.1| DNA ligase I [Dictyostelium fasciculatum]
Length = 929
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 101/215 (46%), Gaps = 37/215 (17%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRAGSD-LDVLII 122
+V++++ + +E I+ EG+++K L S +EP RS WLK+K +Y+ +D +DV+ I
Sbjct: 720 DVNDIQLYLQEAIDGNCEGLMVKTLKEQSIYEPSKRSYNWLKIKKDYMAGMTDSVDVVPI 779
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
G +YG G+R G +L+A + D F + C++GTG SDE+L L P
Sbjct: 780 GAWYGKGKRTGVYGAYLLACYDDDNED-----FQTLCKIGTGFSDEQLKEFTEILAP--- 831
Query: 183 KYEYPKRAPPSFYQVTNNSKE--------RPDVWIESPEKSIILSITSDIRTIRSEVFSA 234
QVTN+ K +PDVW + +L+ I I +
Sbjct: 832 -------------QVTNSCKNTYIVSDNLKPDVWFNPSQVWEVLAADLSISPIHTAAVGV 878
Query: 235 -----PYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
+LRFPR ++R DK D V++
Sbjct: 879 LDPNKGIALRFPRFIQIRKDKNPEDATTASQIVDM 913
>gi|449551128|gb|EMD42092.1| hypothetical protein CERSUDRAFT_110637 [Ceriporiopsis subvermispora
B]
Length = 841
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 111/235 (47%), Gaps = 32/235 (13%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDV 119
+E++ F +E++++ EG+++K L S +EP RS WLKLK +Y+ G LD+
Sbjct: 622 GETTEEIQTFLEESVKDGCEGLMVKMLDGEPSFYEPSRRSVNWLKLKKDYLAGVGDSLDL 681
Query: 120 LIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 179
+++G YYG G+R FL+A D F + C++GTG S+E L L+P
Sbjct: 682 VVVGAYYGKGKRTNVYGAFLLACW-----DADAEEFQTICKIGTGFSEEVLQKHYESLQP 736
Query: 180 YFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP---- 235
E K P ++ +PDVW E K + +T+D+ S +++A
Sbjct: 737 ----LEMTK--PRGDIKIGG---AKPDVWFEP--KVVWEVLTADLSL--SPIYTAAQGLV 783
Query: 236 ----YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKG--KEYGGLQDD 284
SLRFPR R+R DK D + E+ KG + GG DD
Sbjct: 784 DERGISLRFPRFIRIRDDKSAEDGTGPEQIAEMYEKQALAQSKGGKRSKGGDADD 838
>gi|299755490|ref|XP_001828699.2| DNA ligase I [Coprinopsis cinerea okayama7#130]
gi|298411247|gb|EAU93094.2| DNA ligase I [Coprinopsis cinerea okayama7#130]
Length = 803
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 111/233 (47%), Gaps = 31/233 (13%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDL---GSKWEPGDRSGKWLKLKPEYIRA-GSDLDV 119
+ DE++ F +E++++ EG+++K L S +EP RS WLKLK +Y+ G LD+
Sbjct: 587 GESTDEIQTFLEESVKDGCEGLMVKMLESDASNYEPSRRSVNWLKLKKDYLAGVGDSLDL 646
Query: 120 LIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 179
+++G YYG G+R FL+A D + + C++GTG SDE L LKP
Sbjct: 647 VVVGAYYGKGKRTNYYGAFLLACY-----DADSEEYQTICKIGTGFSDEALQTHYETLKP 701
Query: 180 YFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP---- 235
+ P ++ +PD+W E K + +T+D+ S +++A
Sbjct: 702 ------LEQTKPRGDIKIGGA---KPDIWFEP--KVVWEVLTADLSL--SPIYTAAQGLV 748
Query: 236 ----YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 284
SLRFPR RVR DK D + E+ + Q G + G DD
Sbjct: 749 EERGISLRFPRFIRVRDDKDADDATAPEQIAEM-YERQSLAQAGSKKKGGDDD 800
>gi|449017186|dbj|BAM80588.1| DNA ligase I [Cyanidioschyzon merolae strain 10D]
Length = 1028
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 106/210 (50%), Gaps = 26/210 (12%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLI 121
++D ++KF +E + + EG+++K L S +EP +R+ WLKLK +Y+R G LD++
Sbjct: 803 DLDGIQKFMEEAVRDSCEGLMVKALEGPLSTYEPANRTQHWLKLKKDYLRTIGDTLDLVP 862
Query: 122 IGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYF 181
IG YYG G+R G FL+A P+T +F + RVGTG S+E++ + ++ Y
Sbjct: 863 IGAYYGRGKRTGWFGSFLLACYN---PET--EQFEAVTRVGTGFSEEQMAQLHSEYAQYV 917
Query: 182 RKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPY----- 236
P V + +PD+W++ + + +D+ + V + Y
Sbjct: 918 LDSPRP--------YVACSESVKPDIWLDP--RQVWEVQCADLSISPAYVAACGYIAPDK 967
Query: 237 --SLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
S+RFPR+ R+R DK D E+
Sbjct: 968 GISVRFPRLLRIRSDKRPEDATTSAQLAEM 997
>gi|342874818|gb|EGU76737.1| hypothetical protein FOXB_12758 [Fusarium oxysporum Fo5176]
Length = 879
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 106/222 (47%), Gaps = 23/222 (10%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDV 119
+DE++ F E+++ EG+++K L S +EP RS WLK+K +Y+ G LD+
Sbjct: 657 GQELDEIQVFLDESVKASCEGLMVKMLDGTESGYEPSKRSRNWLKIKKDYLSGVGDSLDL 716
Query: 120 LIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 179
+++G YYG G+R FL+A P +TY + C +GTG S++ L+ + T+L
Sbjct: 717 VVLGAYYGKGKRTSVYGAFLLA-CYNPNSETYE----TVCNIGTGFSEQVLEDLHTQLS- 770
Query: 180 YFRKYEYPKRAPPSFYQVTNNSKERPDVWIES----PEKSIILSITSDIRTIRSEVF--- 232
E P FY ++ + +PDVW E K+ L+++ + E
Sbjct: 771 -----EITIDRPKPFYSHSSGGQHQPDVWFEPRYVWEVKTADLTLSPRYKAGAKEGVDPS 825
Query: 233 -SAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQ 273
+ SLRFPR RVR DK + E+ T+
Sbjct: 826 GNKGISLRFPRFIRVRDDKKADAATTSRQVAEMYRKQESVTK 867
>gi|452210460|ref|YP_007490574.1| ATP-dependent DNA ligase [Methanosarcina mazei Tuc01]
gi|452100362|gb|AGF97302.1| ATP-dependent DNA ligase [Methanosarcina mazei Tuc01]
Length = 579
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 108/218 (49%), Gaps = 37/218 (16%)
Query: 62 LVAHNVDEVEKFFKETIENRDEGIVLKDLGSK--WEPGDRSGKWLKLKPEYIRAGSD-LD 118
+V +V+E+E FF ETIE EGIV+K + S +E G RS W K K EY + D
Sbjct: 380 IVTESVEEIEDFFNETIEKGLEGIVVKSMSSNSYYEAGKRSWFWFKWKQEYSEGMRETFD 439
Query: 119 VLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLK 178
++++G YYG GRR G L A+ + +RF + +VGTG ++ + + + L
Sbjct: 440 LVVVGSYYGRGRRKGSFGALLCAVLNKEG-----QRFETLTKVGTGFTEADAEEINRLLS 494
Query: 179 PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP--- 235
+ E PK V+ PD++IE ++++ + + SE+ ++P
Sbjct: 495 DHIVS-EIPK-------DVSIKKGMLPDIFIEP---AVVIEV------LGSEITNSPGHT 537
Query: 236 ---------YSLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
+LRFPR R+R+DK +D + V+ +L
Sbjct: 538 AGEGEEETGLALRFPRFLRIRHDKTPYDAMTVKEVRDL 575
>gi|21227997|ref|NP_633919.1| ATP-dependent DNA ligase [Methanosarcina mazei Go1]
gi|74524266|sp|Q8PVR7.1|DNLI1_METMA RecName: Full=DNA ligase 1; AltName: Full=Polydeoxyribonucleotide
synthase [ATP] 1
gi|20906425|gb|AAM31591.1| ATP-dependent DNA ligase [Methanosarcina mazei Go1]
Length = 579
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 108/218 (49%), Gaps = 37/218 (16%)
Query: 62 LVAHNVDEVEKFFKETIENRDEGIVLKDLGSK--WEPGDRSGKWLKLKPEYIRAGSD-LD 118
+V +V+E+E FF ETIE EGIV+K + S +E G RS W K K EY + D
Sbjct: 380 IVTESVEEIEDFFNETIEKGLEGIVVKSMSSNSYYEAGKRSWFWFKWKQEYSEGMRETFD 439
Query: 119 VLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLK 178
++++G YYG GRR G L A+ + +RF + +VGTG ++ + + + L
Sbjct: 440 LVVVGSYYGRGRRKGSFGALLCAVLNKEG-----QRFETLTKVGTGFTEADAEEINRLLS 494
Query: 179 PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP--- 235
+ E PK V+ PD++IE ++++ + + SE+ ++P
Sbjct: 495 DHIVS-EIPK-------GVSIKKGMLPDIFIEP---AVVIEV------LGSEITNSPGHT 537
Query: 236 ---------YSLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
+LRFPR R+R+DK +D + V+ +L
Sbjct: 538 AGEGEEETGLALRFPRFLRIRHDKTPYDAMTVKEVRDL 575
>gi|402079070|gb|EJT74335.1| DNA ligase 1 [Gaeumannomyces graminis var. tritici R3-111a-1]
Length = 944
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 137/291 (47%), Gaps = 55/291 (18%)
Query: 6 FAQLMTLSVLHDKDNACNISTVAMNDGICVCVHVYMLSQL------------RSQIMAAD 53
F QLMT K I V + VCV + L L R +++AA
Sbjct: 656 FQQLMT-----RKKKDVKIEDVKVK----VCVFAFDLLYLNGEAVVEKSLRERRELLAA- 705
Query: 54 QTGEPC---WSLVAH----NVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKW 103
+ EP ++L H +DE++ F E+++ EG+++K L S +EP RS W
Sbjct: 706 -SFEPVEGEFALATHMNGRELDEIQTFLDESVKASCEGLMVKMLDGAESGYEPSKRSRNW 764
Query: 104 LKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVG 162
LK+K +Y+ G LD++++G Y+G G+R FL+A P+ DTY + C +G
Sbjct: 765 LKIKKDYLSGIGDSLDLVVLGAYHGKGKRTSVYGAFLLA-CYNPSSDTYE----TICNIG 819
Query: 163 TGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE-----KSII 217
TG S+ L+ + ++LK + PK FY ++ + +PDVW+E P K+
Sbjct: 820 TGFSEAVLEELHSQLKDTV--IDRPK----PFYSHSSGGQHQPDVWLE-PRLVWEVKTAD 872
Query: 218 LSITSDIRTIRSE----VFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
L+++ + E + SLRFPR ++R DK + + E+
Sbjct: 873 LTLSPRYKAGCGEGVDPAGAKGISLRFPRFIKLRDDKKPDEATSSRQVAEM 923
>gi|71023511|ref|XP_761985.1| hypothetical protein UM05838.1 [Ustilago maydis 521]
gi|46101550|gb|EAK86783.1| hypothetical protein UM05838.1 [Ustilago maydis 521]
Length = 892
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 115/231 (49%), Gaps = 32/231 (13%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLI 121
+V+++ F ++++ EG+++K L S +EP RS WLKLK +Y+ G LD+++
Sbjct: 678 SVEQISVFLDKSVKEGCEGLMVKMLSGVDSTYEPSRRSMNWLKLKKDYLAGTGDSLDLVV 737
Query: 122 IGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYF 181
IGGYYG G+R FL+A D+ F + C++GTG ++++L++ LK
Sbjct: 738 IGGYYGKGKRTNVYGAFLLACY-----DSDSETFQTICKIGTGFTEQDLESHYKTLK--- 789
Query: 182 RKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP------ 235
+ +Y V + +PDV+ E+ K + +T+D+ S V++A
Sbjct: 790 ---QLEISGKKGYYDV---GEAKPDVYFEA--KVVWEVLTADLSL--SPVYTAAKGLVDQ 839
Query: 236 --YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 284
SLRFPR R+R DK + + + S + KGK G DD
Sbjct: 840 RGISLRFPRFIRIRDDKTAEESTSPEQIEAMYRSQVVNSSKGK--SGADDD 888
>gi|390365532|ref|XP_786357.3| PREDICTED: DNA ligase 3 [Strongylocentrotus purpuratus]
Length = 974
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 103/207 (49%), Gaps = 14/207 (6%)
Query: 69 EVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGY 125
++ + I EG+VLKD+ S +EPG R WLK+K +Y++ GS D+L++G +
Sbjct: 656 QLSGLIADVIREGLEGLVLKDVQSLYEPGKR--HWLKVKKDYLKEGSMADSADLLVLGAF 713
Query: 126 YGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYE 185
YG+G +GG ++ FL+ + + P D++ R ++ C G GL D +D V L K
Sbjct: 714 YGTGTKGGMMSVFLMGVYD-PNSDSF--RTVTKC--GNGLDDNTMDKVNRDLD--MVKIS 766
Query: 186 YPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDR 245
PS+ +V N PD I P+K+ + I T + S+RFPR+ R
Sbjct: 767 KDSSKVPSWLRV--NKTLVPDFVIREPKKAPVWEIIGAEFTQSETHTAGGISIRFPRVTR 824
Query: 246 VRYDKPWHDCLDVQSFVELVHSSNGTT 272
+R DK + D+ L S +T
Sbjct: 825 IRDDKDFETATDLPRLRTLFKKSKEST 851
>gi|45185533|ref|NP_983249.1| ACL155Wp [Ashbya gossypii ATCC 10895]
gi|44981251|gb|AAS51073.1| ACL155Wp [Ashbya gossypii ATCC 10895]
gi|374106454|gb|AEY95363.1| FACL155Wp [Ashbya gossypii FDAG1]
Length = 697
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 101/210 (48%), Gaps = 20/210 (9%)
Query: 62 LVAHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDL 117
+ + E++ + ++++ EG+++K L S++EP RS WLKLK +Y+ G L
Sbjct: 492 ITTMELSELQTYLEQSVSASCEGLMVKMLDGEESQYEPSKRSRNWLKLKKDYLEGVGDSL 551
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D+ ++G YYG G+R G FL+ PD F + C++GTG S+E L ++ +L
Sbjct: 552 DLAVLGAYYGRGKRTGTYGGFLLGCYN---PDL--EEFETCCKIGTGFSEEVLQSLHAQL 606
Query: 178 KPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSI---TSDIRTIRSEVFSA 234
K + AP V+ + PDVW E +L+ S + +V+
Sbjct: 607 K------DTVIAAPRG--DVSYDDSSPPDVWFEPAMLFEVLTADLSLSPVYKAGRDVYGK 658
Query: 235 PYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
SLRFPR R+R DK D VE
Sbjct: 659 GISLRFPRFLRIREDKSVTDATSSDQIVEF 688
>gi|390361383|ref|XP_001180844.2| PREDICTED: DNA ligase 1-like [Strongylocentrotus purpuratus]
Length = 942
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 104/198 (52%), Gaps = 21/198 (10%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRA-GSDL 117
S+++ +VD++ F +E+++ EG+++K L + +E RS WLKLK +Y+ G L
Sbjct: 721 SMISSDVDDIAVFLEESVKGNCEGLMVKTLDKDATYEIARRSHNWLKLKKDYLDGVGDTL 780
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
DV+++GG+ G G+R G FL+A D F S C++GTG +EEL+ K
Sbjct: 781 DVVVLGGFQGRGKRVGSYGGFLLACY-----DEENEEFQSICKIGTGFKEEELE----KH 831
Query: 178 KPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRSEVFS 233
+F+ + K P Y +S PD W ++ + K+ LS++ + V
Sbjct: 832 TKFFKDHLIEKPRPYYNY----DSSVAPDHWFDAVQVWEIKAADLSVSPVHKAAIGIVDP 887
Query: 234 AP-YSLRFPRIDRVRYDK 250
A SLRFPR R+R DK
Sbjct: 888 AKGISLRFPRFIRIRDDK 905
>gi|167043262|gb|ABZ07968.1| putative DNA ligase N-terminal domain [uncultured marine
crenarchaeote HF4000_ANIW141M12]
Length = 585
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 102/230 (44%), Gaps = 62/230 (26%)
Query: 62 LVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIR-AGSDLDVL 120
L+ N +EV F + +I EG++LK + + G R WLKLK EY G LD++
Sbjct: 380 LLVKNENEVGDFLENSINAGCEGLMLKTPSAPYRAGSRGSNWLKLKREYRNELGDSLDLI 439
Query: 121 IIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPY 180
+IG Y+G GRR G L+ P D +P S C+VGTG +DE LD
Sbjct: 440 VIGAYFGRGRRTGLYGTLLLG-TYNPEQDNFP----SICKVGTGFTDESLD--------- 485
Query: 181 FRKYEYPKRAPPSFYQVTNN-----------SKERPDVWIESPEKSIILSITSDIRTIRS 229
YQ+ +N S+ DVW+E PE ++L I + S
Sbjct: 486 ------------QLYQILSNNVTLKKNSRIISEMEADVWLE-PE--LVLEIVA------S 524
Query: 230 EVFSAP--------------YSLRFPRI-DRVRYDKPWHDCLDVQSFVEL 264
E+ +P ++LRFP+ ++RY+K D V+ + L
Sbjct: 525 EITLSPIHKTGLDLIRKNSGFALRFPKFTGKIRYEKAVEDASTVEEVLTL 574
>gi|15920405|ref|NP_376074.1| ATP-dependent DNA ligase [Sulfolobus tokodaii str. 7]
gi|20137895|sp|Q976G4.1|DNLI_SULTO RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|15621187|dbj|BAB65183.1| DNA ligase [Sulfolobus tokodaii str. 7]
Length = 600
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 113/211 (53%), Gaps = 23/211 (10%)
Query: 62 LVAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRAGSD-LD 118
+ +NVD++ +FF + I N EG+++K + S ++ G R W+KLK +Y +D +D
Sbjct: 388 IYTNNVDKLMEFFYDAISNGAEGVMVKSVAKDSIYQAGSRGFLWIKLKRDYQSEMADSVD 447
Query: 119 VLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLK 178
++++G +YG G+RGG+++ L+A A P DT F + C+V +G SD ELD + KL
Sbjct: 448 LVVVGAFYGRGKRGGKLSSLLMA-AYDPETDT----FKTVCKVASGFSDAELDELQKKL- 501
Query: 179 PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILS--IT-SDIRTIRSEVFS-- 233
+ + K+ P +S+ PD+W+E + I+ IT S T ++ S
Sbjct: 502 ---MEIKLDKKDP------RVDSQLEPDIWVEPKYVAEIIGAEITLSPEHTCCKDMVSKG 552
Query: 234 APYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
A S+RFPR R R DK D + E+
Sbjct: 553 AGLSVRFPRFIRWRDDKSIEDATTPKEIYEM 583
>gi|328848917|gb|EGF98110.1| hypothetical protein MELLADRAFT_41015 [Melampsora larici-populina
98AG31]
Length = 635
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 113/229 (49%), Gaps = 32/229 (13%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLKDLGSK---WEPGDRSGKWLKLKPEYIRA-GSD 116
SL + V+E++ F E+I+ EG+++K L + +EP RS WLK+K +Y+ G
Sbjct: 409 SLDSDKVEEIQVFLDESIKASCEGLMVKMLNGENAYYEPSRRSMNWLKVKKDYLAGLGDS 468
Query: 117 LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTK 176
LD+++IG Y+G G+R FL+ + D + S C++GTG +DE L++ K
Sbjct: 469 LDLVVIGAYFGKGKRTNVYGAFLLGIY-----DQSTESYQSICKIGTGFTDEVLESHYQK 523
Query: 177 LKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP- 235
LKP E ++ S+Y + +PDVWIE+ + + + +D+ S ++SA
Sbjct: 524 LKP----LELLQKK--SYY---DTGDVKPDVWIEN--RIVWEVLAADLSL--SPIYSAAR 570
Query: 236 ---------YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKG 275
SLRFPR R R DK D E+ T +G
Sbjct: 571 GLCGDGTRGISLRFPRYIRERDDKGPEDGTGPDQVAEMYERQVCTQTQG 619
>gi|156846774|ref|XP_001646273.1| hypothetical protein Kpol_1032p7 [Vanderwaltozyma polyspora DSM
70294]
gi|156116948|gb|EDO18415.1| hypothetical protein Kpol_1032p7 [Vanderwaltozyma polyspora DSM
70294]
Length = 965
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 113/484 (23%), Positives = 202/484 (41%), Gaps = 71/484 (14%)
Query: 74 FKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIGGYYGSGRRG 132
++ IE EGI+LK S++ RS W+K+KPEY+ + G ++D+++IG G++
Sbjct: 455 LEKAIELGSEGIILKRFDSQYLVAKRSDDWIKIKPEYLEQFGENMDLIVIGR--DPGKKD 512
Query: 133 GEVAQFLVALAERP----APDTYP------------RRFISFCRVGTGLSDEELDAVVTK 176
+ ++ P + D+ P R+ ISFC + G+S +E +
Sbjct: 513 SLMCGLILTGDNEPEEITSLDSNPTDTAESFLKPDKRKIISFCNIANGISQKEFRDIDRY 572
Query: 177 LKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSE-----V 231
++ K++ PP + + P WI PE S++L I + R++ +
Sbjct: 573 TFGHWIKFD--DELPPQ--DLFEFGTKHPIEWI-YPEHSVVLEIKA--RSLETNESARIK 625
Query: 232 FSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQ--KGKEYGGLQDDKPKQF 289
+ +L ++RYDK W C F+E + N K G + K+
Sbjct: 626 YGTGSTLFGGYCRQIRYDKDWVSCFTYNEFMESRNLKNALVNYPDNKNLIGRKKRPKKRM 685
Query: 290 RSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFVNV------PPAYSLDSLHK 343
+S +N P D S++ IF + FY ++ S L
Sbjct: 686 FNSLTEIFENTKDAP------DESNV-----IFRGLHFYVISDYIDETDGSRLSKSDLCN 734
Query: 344 MVVENGGTFSMNLNNSVTHCVAADNKGLKY-----EAAKRRGDVIHYSWVLDCCSQKKLL 398
+V+E+ G N + + +KY +R D+IH W+LDC S +KL+
Sbjct: 735 LVLEHNGKLVHNPISRIDILNRLRIISMKYTRETTSLIERGYDIIHPQWILDCISNRKLV 794
Query: 399 QLQPKYYLHLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLS-NVDRSE--DPKTIDYY 455
+L P + ++S S + + VD + D Y L D + L++ V +SE D + +
Sbjct: 795 RLLPSHCFNVSSSLMEVTKTRVDRYGDSYETSLTEKDFEILINRQVLKSESADKRITEGE 854
Query: 456 KKKYCPQDKWSCFHGCCIYFYHSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNLANA 515
P + +F T P +P +E LK ++ +GGK+ N +++
Sbjct: 855 NHLKIPILLFCNRR----FFIPETLPSTPIYE---------LKSKVELYGGKLVNKISDC 901
Query: 516 THVV 519
+V
Sbjct: 902 NVIV 905
>gi|407851837|gb|EKG05546.1| DNA ligase I, putative [Trypanosoma cruzi]
Length = 701
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 108/210 (51%), Gaps = 26/210 (12%)
Query: 49 IMAADQTGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKL 106
I AA Q E L +V+E++ F +I++ EG+++K L + + P RS WLKL
Sbjct: 478 IHAAFQFAE---HLDGTDVEEIQSFLDRSIKDGCEGLMVKTLKEEATYTPAKRSYCWLKL 534
Query: 107 KPEYIRAGSD-LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGL 165
K +Y+ +D LD++ IG YYG G+R G FL+A + + F S C++G+G
Sbjct: 535 KKDYMDGVTDTLDLVPIGAYYGKGKRTGVFGGFLLACYNSDSDE-----FQSICKIGSGF 589
Query: 166 SDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIR 225
DE+L+++ L+ + P +Y+ ++E+PDVW+E+ + + I
Sbjct: 590 LDEQLESLTQALQSCVLMEQ------PRYYR----AEEKPDVWLEASNVWEVKAADLSIS 639
Query: 226 TIRSEVF-----SAPYSLRFPRIDRVRYDK 250
+ + S +LRFPR RVR DK
Sbjct: 640 PVHFAAYGLVDPSKGIALRFPRFVRVREDK 669
>gi|347840149|emb|CCD54721.1| hypothetical protein [Botryotinia fuckeliana]
Length = 923
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 103/202 (50%), Gaps = 23/202 (11%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSD 116
S+ +DE++ F ++++ EG+++K L S +EP RS WLK+K +Y+ G
Sbjct: 698 SMNGQEIDEIQTFLDDSVKASCEGLMVKMLDGTESGYEPSKRSRNWLKIKKDYLSGIGDS 757
Query: 117 LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTK 176
LD++++G YYG G+R FL+A P DTY + C +GTG S++ L+ + +
Sbjct: 758 LDLVVLGAYYGRGKRTSVYGAFLLA-CHNPQTDTYE----TICNIGTGFSEQVLEELYAQ 812
Query: 177 LKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIES----PEKSIILSITSDIRTIRSEVF 232
L + PK FY ++ ++ +PDVW E K+ L+++ + E
Sbjct: 813 LSAIV--IDRPK----PFYSHSSGNQHQPDVWFEPRYVWEVKTADLTLSPRYKAGCKEGV 866
Query: 233 SA----PYSLRFPRIDRVRYDK 250
SLRFPR ++R DK
Sbjct: 867 DKGGERGISLRFPRFIKIRDDK 888
>gi|71663975|ref|XP_818973.1| DNA ligase I [Trypanosoma cruzi strain CL Brener]
gi|70884254|gb|EAN97122.1| DNA ligase I, putative [Trypanosoma cruzi]
Length = 699
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 108/210 (51%), Gaps = 26/210 (12%)
Query: 49 IMAADQTGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKL 106
I AA Q E L +V+E++ F +I++ EG+++K L + + P RS WLKL
Sbjct: 478 IHAAFQFAE---HLDGTDVEEIQSFLDRSIKDGCEGLMVKTLKEEAAYTPAKRSYCWLKL 534
Query: 107 KPEYIRAGSD-LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGL 165
K +Y+ +D LD++ IG YYG G+R G FL+A + + F S C++G+G
Sbjct: 535 KKDYMDGVTDTLDLVPIGAYYGKGKRTGVFGGFLLACYNSDSDE-----FQSICKIGSGF 589
Query: 166 SDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIR 225
DE+L+++ L+ + P +Y+ ++E+PDVW+E+ + + I
Sbjct: 590 LDEQLESLTQALQSCVLMEQ------PRYYR----AEEKPDVWLEASNVWEVKAADLSIS 639
Query: 226 TIRSEVF-----SAPYSLRFPRIDRVRYDK 250
+ + S +LRFPR RVR DK
Sbjct: 640 PVHFAAYGLVDPSKGIALRFPRFVRVREDK 669
>gi|322801939|gb|EFZ22486.1| hypothetical protein SINV_00170 [Solenopsis invicta]
Length = 759
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 109/232 (46%), Gaps = 21/232 (9%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYIRA-GSDL 117
SL ++EVE F E+++ EG+++K L + +E RS WLKLK +Y+ G L
Sbjct: 539 SLDTTTMEEVEVFLDESVKGNCEGLMVKTLEKDATYEIAKRSRNWLKLKKDYLDGVGDTL 598
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
DV++IGGY G G+R G FL+A D + S C++GTG +++L+
Sbjct: 599 DVVVIGGYIGKGKRTGTYGGFLLACY-----DQENEEYQSICKIGTGFKEDDLETHTK-- 651
Query: 178 KPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRSEV-F 232
+F+ + P+ S+Y+ +S PD W E + K LS++ R V
Sbjct: 652 --FFKDHVIPQAK--SYYRF--DSSHEPDHWFEPIQVWEIKCADLSLSPVHRAAIGIVDP 705
Query: 233 SAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 284
SLRFPR R+R DK Q ++ ++ K ++D
Sbjct: 706 EKGISLRFPRFIRIREDKTCEQANSAQDVADMYNNQEQIKNKTSALKATEED 757
>gi|154294102|ref|XP_001547494.1| hypothetical protein BC1G_14121 [Botryotinia fuckeliana B05.10]
Length = 919
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 103/202 (50%), Gaps = 23/202 (11%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSD 116
S+ +DE++ F ++++ EG+++K L S +EP RS WLK+K +Y+ G
Sbjct: 694 SMNGQEIDEIQTFLDDSVKASCEGLMVKMLDGTESGYEPSKRSRNWLKIKKDYLSGIGDS 753
Query: 117 LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTK 176
LD++++G YYG G+R FL+A P DTY + C +GTG S++ L+ + +
Sbjct: 754 LDLVVLGAYYGRGKRTSVYGAFLLA-CHNPQTDTYE----TICNIGTGFSEQVLEELYAQ 808
Query: 177 LKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIES----PEKSIILSITSDIRTIRSEVF 232
L + PK FY ++ ++ +PDVW E K+ L+++ + E
Sbjct: 809 LSAIV--IDRPK----PFYSHSSGNQHQPDVWFEPRYVWEVKTADLTLSPRYKAGCKEGV 862
Query: 233 SA----PYSLRFPRIDRVRYDK 250
SLRFPR ++R DK
Sbjct: 863 DKGGERGISLRFPRFIKIRDDK 884
>gi|322709388|gb|EFZ00964.1| DNA ligase [Metarhizium anisopliae ARSEF 23]
Length = 886
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 105/222 (47%), Gaps = 23/222 (10%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDV 119
+DE++ F E+++ EG+++K L S +EP RS WLK+K +Y+ G LD+
Sbjct: 664 GQELDEIQLFLDESVKASCEGLMVKMLDGTESGYEPSKRSRNWLKVKKDYLAGVGDSLDL 723
Query: 120 LIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 179
+++G YYG G+R FL+A PA DTY + C +GTG S++ L+ + +L
Sbjct: 724 VVLGAYYGRGKRTSVYGAFLLA-CYNPANDTYE----TVCNIGTGFSEQVLEELHAQLS- 777
Query: 180 YFRKYEYPKRAPPSFYQVTNNSKERPDVWIES----PEKSIILSITSDIRTIRSEVFSAP 235
E P FY + + +PDVW E K+ L+++ + E
Sbjct: 778 -----EIVIDRPKPFYSHSAGGQHQPDVWFEPRYVWEVKTADLTLSPRYKAGCKEGVDPA 832
Query: 236 ----YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQ 273
SLRFPR ++R DK + + E+ T+
Sbjct: 833 GDKGISLRFPRFIKIRDDKKPDEATSSRQIAEMYRKQESVTK 874
>gi|167045650|gb|ABZ10298.1| putative ATP-dependent DNA ligase C terminal domain, partial
[uncultured marine crenarchaeote HF4000_APKG10L15]
Length = 234
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 113/264 (42%), Gaps = 54/264 (20%)
Query: 34 CVCVHVYMLSQLRSQIMAADQTGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSK 93
C+ + ++ QI+ D + L N +E+E F + +I EG++LK +
Sbjct: 1 CLNLEYSERRKILEQIIHEDNFSKLVPMLFVKNENEIEDFLENSINAGCEGLMLKTPSAP 60
Query: 94 WEPGDRSGKWLKLKPEYIR-AGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYP 152
+ G R WLKLK EY G D+++IG Y+G GRR G L+A P D +P
Sbjct: 61 YRAGTRGSNWLKLKREYRNELGDSFDLIVIGAYFGRGRRTGLYGTLLLA-TYNPEKDNFP 119
Query: 153 RRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNN-----------S 201
S C+VGTG +DE LD + YQ+ +N S
Sbjct: 120 ----SICKVGTGFTDESLDQL---------------------YQILSNNVTLKKNSRIVS 154
Query: 202 KERPDVWIESPEKSIILSITSDIR----------TIRSEVFSAPYSLRFPRI-DRVRYDK 250
+ DVW E K ++ + S+I IR S+ ++LRFP+ ++RY+K
Sbjct: 155 EMEADVWFEP--KLVLEIVGSEITLSPIHKTGLDLIRK---SSGFALRFPKFTGKIRYEK 209
Query: 251 PWHDCLDVQSFVELVHSSNGTTQK 274
D + + L + Q+
Sbjct: 210 AVEDASTAEEVLALYKGQSKINQE 233
>gi|440803704|gb|ELR24587.1| ligase I, DNA, ATPdependent, putative [Acanthamoeba castellanii
str. Neff]
Length = 753
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 104/217 (47%), Gaps = 37/217 (17%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRAGSD-LDVL 120
A+ DE+ E++ EG+++K L + ++P RS WLK+K +Y+ +D +D++
Sbjct: 539 ANTTDEIANSLHESVAGNCEGLMIKRLDEDATYQPSKRSYSWLKVKKDYLTGMTDSVDLV 598
Query: 121 IIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEEL--------DA 172
IG YYG G+R G FL+A D F + C++GTG SDE+L D
Sbjct: 599 PIGAYYGKGKRTGVYGAFLLACY-----DPNAEEFQNVCKIGTGFSDEDLEKFAEFFKDK 653
Query: 173 VVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESP----EKSIILSITSDIRTIR 228
+++K +PY+R + + PDVW ++ K+ LS++ +
Sbjct: 654 IISKPRPYYR----------------YSDQVEPDVWFDASVVWEVKAADLSLSPHYKAAL 697
Query: 229 SEVF-SAPYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
V S SLRFPR R R DK D + + E+
Sbjct: 698 GLVSESKGISLRFPRYLRTRDDKKPEDATNGEQIAEM 734
>gi|403412845|emb|CCL99545.1| predicted protein [Fibroporia radiculosa]
Length = 826
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 105/213 (49%), Gaps = 32/213 (15%)
Query: 65 HNVDEVEKFFKETIENRDEGIVLKDL---GSKWEPGDRSGKWLKLKPEYIRA-GSDLDVL 120
+E++ F +E++++ EG+++K L S +EP RS WLKLK +Y+ G LD++
Sbjct: 608 ETTEEIQAFLEESVKDGCEGLMVKMLEEDPSFYEPSRRSVNWLKLKKDYLAGVGDSLDLV 667
Query: 121 IIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPY 180
++G YYG G+R FL+A D + + C++GTG S+E L A LKP
Sbjct: 668 VVGAYYGKGKRTNVYGAFLLACY-----DADAEEYQTICKIGTGFSEEALQAHHDTLKP- 721
Query: 181 FRKYEYPK-RAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP---- 235
E K RA +PDVW+E K + +T+D+ S +++A
Sbjct: 722 ---LETTKARAD------IKIGGAKPDVWLEP--KVVWEVLTADLSL--SPIYTAAQGLV 768
Query: 236 ----YSLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
SLRFPR R+R DK D + E+
Sbjct: 769 EERGISLRFPRFIRIRDDKSADDATGPEQIAEM 801
>gi|115443382|ref|XP_001218498.1| DNA ligase (Polydeoxyribonucleotide synthase [ATP]) [Aspergillus
terreus NIH2624]
gi|114188367|gb|EAU30067.1| DNA ligase (Polydeoxyribonucleotide synthase [ATP]) [Aspergillus
terreus NIH2624]
Length = 873
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 110/231 (47%), Gaps = 24/231 (10%)
Query: 67 VDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLII 122
+DE++ +E+++ EG+++K L S +EP RS WLK+K +Y+ G LD++++
Sbjct: 651 LDEIQNLLEESVKASCEGLMVKMLDTEESGYEPSKRSRNWLKVKKDYLSGVGDSLDLVVL 710
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
G Y+G G+R FL+A A + + + + C +GTG S+ +L+ + +L P
Sbjct: 711 GAYHGRGKRTSVYGAFLLA-----AYNASTQTYETICNIGTGFSEADLEELHKELSPLVI 765
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIES----PEKSIILSITSDIRTIRSEVFSAP--- 235
RA P FY + K++PDVW E K+ L+++ + E
Sbjct: 766 -----DRAKP-FYSHSTVPKDQPDVWFEPRLVWEVKTADLTLSPRYKAAADEFMGTTGGT 819
Query: 236 --YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 284
SLRFPR + R DK ++ E+ ++ G+ DD
Sbjct: 820 KGVSLRFPRFIKRRDDKKPEQATTTRAVAEMYRKQEAVAKENVGKKGVDDD 870
>gi|9630988|ref|NP_047658.1| DNA ligase [Lymantria dispar MNPV]
gi|57012727|sp|Q9YMV2.1|DNLI_NPVLD RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|3822256|gb|AAC70207.1| DNA ligase [Lymantria dispar MNPV]
Length = 548
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 103/213 (48%), Gaps = 15/213 (7%)
Query: 65 HNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLI 121
+ + E+ +F T+ EG+VLK S + P R W K+K E++ G+ LD+++
Sbjct: 327 NTLSELRRFVHRTLATGAEGVVLKGRLSSYAPNKRD--WFKMKKEHLCDGALVDTLDLVV 384
Query: 122 IGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYF 181
+G YYG+GR +++ FL+ +R + + + +V +GL+D L A+ +L+P
Sbjct: 385 LGAYYGTGRNCRKMSVFLMGCLDRES-----NVWTTVTKVHSGLADAALTALSKELRPLM 439
Query: 182 RKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFP 241
P+ P ++ N P + PEK + I +A ++RFP
Sbjct: 440 ---AAPRDDLPEWFDC--NESMVPHLLAADPEKMPVWEIACSEMKANIGAHTAGVTMRFP 494
Query: 242 RIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQK 274
R+ R R DK W D+Q +L+ +S T+K
Sbjct: 495 RVKRFRPDKDWSTATDLQEAEQLIRNSQENTKK 527
>gi|198417566|ref|XP_002129234.1| PREDICTED: Zn-finger (NAD(+) ADP-ribosyltransferase)-2 [Ciona
intestinalis]
Length = 854
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 95/188 (50%), Gaps = 14/188 (7%)
Query: 68 DEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGG 124
D+++ I+ EG+VLKD+ +EPG R WLK+K +Y+ G D++++G
Sbjct: 531 DDLKHMIVRVIKEGLEGLVLKDIKGVYEPGKRH--WLKVKKDYLMQGQMADTADLVVLGA 588
Query: 125 YYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKY 184
YYG+G +GG ++ FL+ + D R+ + +VG G DE L+ + +LK K
Sbjct: 589 YYGTGSKGGMMSVFLMGVY-----DEKRERWCTVTKVGNGHDDETLEKINKQLK--VEKI 641
Query: 185 EYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRID 244
+ P + + N PD+ + P+ + + IT T + S+RFPR+
Sbjct: 642 SKDMKRVPKWLNLNKN--HVPDLVVADPKNAPVWEITGTEFTQSESHTAEGISIRFPRVT 699
Query: 245 RVRYDKPW 252
++R DK W
Sbjct: 700 KIRRDKNW 707
>gi|443700074|gb|ELT99220.1| hypothetical protein CAPTEDRAFT_157358 [Capitella teleta]
Length = 603
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 109/224 (48%), Gaps = 38/224 (16%)
Query: 61 SLVAHNVDEVEKFFKETIENRD-EGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRA-GSD 116
S+++ + D++ F ++I+ R+ EG+++K L + +E RS WLKLK +Y+ G
Sbjct: 379 SMMSTDTDDIAVFLDDSIKGRNCEGLMVKTLDEDATYEIAKRSHNWLKLKKDYLDGVGDT 438
Query: 117 LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEEL------ 170
LD+++IGGY+GSG+R G FL+A D F S C++GTG DE+L
Sbjct: 439 LDLVVIGGYHGSGKRTGRYGGFLLACY-----DEENEEFQSICKIGTGFKDEDLEQHAKF 493
Query: 171 --DAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDI 224
D V+ +PY+R +NS E PD W ++ + K+ LS++
Sbjct: 494 FKDHVLDTPRPYYR---------------YDNSHE-PDHWFDAVQVWEVKAADLSVSPVH 537
Query: 225 RTIRSEV-FSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 267
V SLRFPR R+R DK + E+ S
Sbjct: 538 HAAAGLVDPEKGISLRFPRFLRIRDDKKSEEATSAAQVAEMYRS 581
>gi|225559355|gb|EEH07638.1| DNA ligase [Ajellomyces capsulatus G186AR]
Length = 888
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 105/215 (48%), Gaps = 27/215 (12%)
Query: 65 HNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVL 120
+++DE++ E+++ EG+++K L S +EP RS WLK+K +Y+ G LD++
Sbjct: 661 NDLDEIQTLLDESVKASCEGLMVKMLDTEESGYEPSKRSRNWLKVKKDYLAGIGDSLDLV 720
Query: 121 IIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPY 180
++G YYG G+R FL+A A +T + F + C +GTG S+ L+ + L P
Sbjct: 721 VLGAYYGRGKRTSVYGAFLLA-----AYNTSTQTFQTVCNIGTGFSEALLEELHKSLSPL 775
Query: 181 FRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE-----KSIILSITSDIRTIRSEVFSAP 235
P FY ++ K++PDVW E P+ K+ L+++ + E
Sbjct: 776 VIDR------PKPFYDHSSVPKDQPDVWFE-PKYVWEVKAADLTLSPRYKAAADEFMGTS 828
Query: 236 ------YSLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
SLRFPR + R DK + + E+
Sbjct: 829 NGAGKGISLRFPRYIKSRDDKKPEEATATRQVAEM 863
>gi|156375378|ref|XP_001630058.1| predicted protein [Nematostella vectensis]
gi|156217071|gb|EDO37995.1| predicted protein [Nematostella vectensis]
Length = 894
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 99/189 (52%), Gaps = 18/189 (9%)
Query: 83 EGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGGEVAQFL 139
EG+VLKD+ ++EPG R WLK+K +Y+ GS D++++G YYG+G +GG ++ FL
Sbjct: 605 EGLVLKDVTGQYEPGKRH--WLKMKKDYLEEGSMADTADLVVLGAYYGTGNKGGLMSVFL 662
Query: 140 VALAERPAPDTYPR--RFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQV 197
+ + PR ++ + + G G D+ LD + +LK +K P + +V
Sbjct: 663 MGVFN-------PRIKKWCTVAKCGNGHDDKTLDKLNRELK--VKKISKDPNRVPVWLEV 713
Query: 198 TNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLD 257
+ PD ++ P+K+ + IT + + + S+RFPR+ R+R DK W D
Sbjct: 714 --HRSLIPDFVVDDPKKAPVWEITGAEFSKSTTHTADGISIRFPRVTRIRDDKDWETATD 771
Query: 258 VQSFVELVH 266
+ +VH
Sbjct: 772 LDLLKPVVH 780
>gi|392578982|gb|EIW72109.1| hypothetical protein TREMEDRAFT_25666 [Tremella mesenterica DSM
1558]
Length = 671
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 112/235 (47%), Gaps = 39/235 (16%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDL---GSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLI 121
+E++ F +E++++ EG+++K L S +EP RS WLKLK +Y+ G LD+++
Sbjct: 458 TTEEIQSFLEESVKDGCEGLMVKMLTTQSSTYEPSRRSINWLKLKKDYLSGIGDSLDLVV 517
Query: 122 IGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYF 181
IG YYG G+R FL++ + PD+ + + C++GTG S+E L LKP
Sbjct: 518 IGAYYGKGKRTSVYGAFLLSCYD---PDS--EHYQTICKIGTGFSEEILIKFHEMLKPL- 571
Query: 182 RKYEYPKRAPPSFYQVTNNSKE----RPDVWIESPEKSIILSITSDIRTIRSEVFSAPY- 236
QV E +PDVW E K + +T+D+ S +++A +
Sbjct: 572 ------------ELQVVRGDIEVGGAKPDVWFEP--KIVWEVLTADLSL--SPIYTAAHG 615
Query: 237 -------SLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 284
SLRFPR R+R DK + + E + T K GG DD
Sbjct: 616 LVDSRGISLRFPRFIRIREDKSSDEATTSEQVSEF-YQRQVTAGGKKNVGGEGDD 669
>gi|225436462|ref|XP_002272683.1| PREDICTED: DNA ligase 1 [Vitis vinifera]
gi|297734904|emb|CBI17138.3| unnamed protein product [Vitis vinifera]
Length = 723
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 104/206 (50%), Gaps = 37/206 (17%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYI-RAGSDL 117
++ +++++E++KF + ++ EG+++K L + +EP RS WLKLK +Y+ G L
Sbjct: 507 AITSNDLEEIQKFLEAAVDTSCEGLIIKTLNGDATYEPSKRSHNWLKLKKDYMENIGDSL 566
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELD------ 171
D++ I ++G G+R G FL+A D+ + S C++GTG S+ L+
Sbjct: 567 DLVPIAAFHGRGKRAGVYGAFLLACY-----DSNKEEYQSICKIGTGFSEAVLEERSASL 621
Query: 172 --AVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIR 225
V+++ KPY+R + PDVW E E K+ L+I+ R
Sbjct: 622 RSKVISRPKPYYRYAD----------------SIDPDVWFEPTEVWEVKAADLTISPVHR 665
Query: 226 TIRSEV-FSAPYSLRFPRIDRVRYDK 250
V + SLRFPR+ R+R DK
Sbjct: 666 AAVGIVDPNKGISLRFPRLVRIRDDK 691
>gi|93003248|tpd|FAA00207.1| TPA: zinc finger protein [Ciona intestinalis]
Length = 859
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 95/188 (50%), Gaps = 14/188 (7%)
Query: 68 DEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGG 124
D+++ I+ EG+VLKD+ +EPG R WLK+K +Y+ G D++++G
Sbjct: 536 DDLKHMIVRVIKEGLEGLVLKDIKGVYEPGKRH--WLKVKKDYLMQGQMADTADLVVLGA 593
Query: 125 YYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKY 184
YYG+G +GG ++ FL+ + D R+ + +VG G DE L+ + +LK K
Sbjct: 594 YYGTGSKGGMMSVFLMGVY-----DEKRERWCTVTKVGNGHDDETLEKINKQLK--VEKI 646
Query: 185 EYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRID 244
+ P + + N PD+ + P+ + + IT T + S+RFPR+
Sbjct: 647 SKDMKRVPKWLNLNKN--HVPDLVVADPKNAPVWEITGTEFTQSESHTAEGISIRFPRVT 704
Query: 245 RVRYDKPW 252
++R DK W
Sbjct: 705 KIRRDKNW 712
>gi|168050205|ref|XP_001777550.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671035|gb|EDQ57593.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 656
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 108/213 (50%), Gaps = 22/213 (10%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRAGS--DLDV 119
+++++E++KF ++ I + EG+++K L + +EP RS WLKLK +Y+ G LD+
Sbjct: 441 SNDLEEIQKFLEDAINDSCEGLIVKTLSKDATYEPAKRSNNWLKLKKDYMNTGGGDSLDL 500
Query: 120 LIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 179
+ IG +YG G+R G FL+A D F S C++GTG + +AV+ +
Sbjct: 501 VPIGAFYGRGKRVGVYGAFLLACY-----DEDREEFQSICKIGTGFT----EAVLEERSV 551
Query: 180 YFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRSEV-FSA 234
+ + P+ P S+Y+ DVW E E K+ LSI+ R V +
Sbjct: 552 TLKNHVIPQ--PRSYYRYGETIG--VDVWFEDVEVWEVKAADLSISPVHRAAVGLVDPNK 607
Query: 235 PYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 267
SLRFPR+ R+R DK + Q E+ +
Sbjct: 608 GISLRFPRLMRLREDKTPVEATSAQQVAEMYRA 640
>gi|340516366|gb|EGR46615.1| DNA ligase [Trichoderma reesei QM6a]
Length = 877
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 107/223 (47%), Gaps = 25/223 (11%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSK---WEPGDRSGKWLKLKPEYIRA-GSDLDV 119
+DE++ F E+++ EG+++K L K +EP RS WLK+K +Y+ G LD+
Sbjct: 655 GQELDEIQSFLDESVKASCEGLMVKMLDGKESGYEPSKRSRNWLKIKKDYLSGVGDSLDL 714
Query: 120 LIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 179
++IG YYG G+R FL+A + DTY + C +GTG S++ L+ + +L
Sbjct: 715 VVIGAYYGKGKRTSVYGAFLLA-CYNASTDTYE----TVCNIGTGFSEQVLEDLYAQLS- 768
Query: 180 YFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE-----KSIILSITSDIRTIRSEVFSA 234
+ P FY ++ + +PDVW E P+ K+ L+++ + E
Sbjct: 769 -----QITISRPKPFYSHSSGGQHQPDVWFE-PKYVWEVKTADLTLSPRYKAGWKEGVDP 822
Query: 235 P----YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQ 273
SLRFPR ++R DK + + E+ T+
Sbjct: 823 AGEKGISLRFPRFIKIRDDKKPDEATSSRQVAEMYRKQESVTK 865
>gi|195028338|ref|XP_001987033.1| GH20192 [Drosophila grimshawi]
gi|193903033|gb|EDW01900.1| GH20192 [Drosophila grimshawi]
Length = 674
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 124/271 (45%), Gaps = 60/271 (22%)
Query: 35 VCVHVY-------------MLSQLRSQIMAADQTGEPCW----SLVAHNVDEVEKFFKET 77
VCV+++ LS+ R + Q E W +L +++DEV++F +E+
Sbjct: 409 VCVYIFDLLYINGKSLVTQPLSERRKILFEHFQEVEGEWKFATALNTNDMDEVQQFLEES 468
Query: 78 IENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIGGYYGSGRRGGE 134
I+ EG+++K L + +E RS WLKLK +Y+ G LD+++IGGY G GRR G
Sbjct: 469 IKGNCEGLMVKTLDEEATYEIAKRSRNWLKLKKDYLSNVGDSLDLVVIGGYKGKGRRTGI 528
Query: 135 VAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEEL--------DAVVTKLKPYFRKYEY 186
FL+A DT + + C++GTG +DE+L +++ K YFR
Sbjct: 529 YGGFLLA-----CYDTDNEEYQTICKIGTGFTDEDLRQHSEFFSTNKLSEAKSYFRY--- 580
Query: 187 PKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSIT----SDIRTIRSEVFSAPYSL 238
+S PD W E + K LS++ + I + +E SL
Sbjct: 581 -------------DSSLEPDDWFEPCQVWEVKCADLSLSPIHRAGIGIVDAE---RGISL 624
Query: 239 RFPRIDRVRYDKPWHDCLDVQSFVELVHSSN 269
RFPR R+R DK + D + S +
Sbjct: 625 RFPRFIRIRDDKSPENATDANQVAHMYSSQD 655
>gi|118431328|ref|NP_147713.2| ATP-dependent DNA ligase [Aeropyrum pernix K1]
gi|14423680|sp|Q9YD18.2|DNLI_AERPE RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|116062651|dbj|BAA80079.2| ADP-dependent DNA ligase [Aeropyrum pernix K1]
Length = 602
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 109/222 (49%), Gaps = 33/222 (14%)
Query: 58 PCWSLV----AHNVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYI 111
P W L + +E+ FF + IE EG+++K + S + G R W+KLK +Y
Sbjct: 384 PLWRLAESIETSDPEELWTFFLKAIEEGAEGVMVKAVHRDSVYTAGVRGWLWVKLKRDYK 443
Query: 112 RAGSD-LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEEL 170
D +D++++G +YG G+RGG+++ L+A A P D +P + C+V TG +DEEL
Sbjct: 444 SEMMDTVDLVVVGAFYGRGKRGGKLSSLLMA-AYDPDRDVFP----TVCKVATGFTDEEL 498
Query: 171 DAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSI--------TS 222
D ++ +K+ P++ P S+ PDVW+E + IL T
Sbjct: 499 D----RMNEMLKKHIIPRKHP------RVESRIEPDVWVEPALVAEILGAELTLSPMHTC 548
Query: 223 DIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
+ T+R V S+RFPR R R DK D +E+
Sbjct: 549 CLNTVRPGV---GISIRFPRFIRWRDDKSPEDATTTHELLEM 587
>gi|340368751|ref|XP_003382914.1| PREDICTED: DNA ligase 1-like [Amphimedon queenslandica]
Length = 780
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 106/199 (53%), Gaps = 23/199 (11%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEYIRA-GSDL 117
S+ + N+++++ F E+++ EG+++K D + +E RS WLKLK +Y+ G L
Sbjct: 561 SIDSTNIEDIQSFMDESMKGNCEGLMVKCLDKDASYEIAKRSRNWLKLKKDYLEGVGDTL 620
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D++++GG++G+G+R G+ FL+A D + C++GTG DEEL+ + L
Sbjct: 621 DLVVVGGFHGTGKRTGKYGGFLLACY-----DEENEEYQVICKIGTGFKDEELEQHTSYL 675
Query: 178 KPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRSEVFS 233
K ++ P S+Y +++ PD W E + K+ LS+ S + + +
Sbjct: 676 K------DHVIDGPKSYYSTSDSIT--PDHWFEPVQVWEVKAADLSV-SPVYPAAAGIID 726
Query: 234 AP--YSLRFPRIDRVRYDK 250
SLRFPR R+R DK
Sbjct: 727 PEKGISLRFPRFLRIREDK 745
>gi|398019792|ref|XP_003863060.1| DNA ligase I, putative [Leishmania donovani]
gi|322501291|emb|CBZ36370.1| DNA ligase I, putative [Leishmania donovani]
Length = 667
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 108/215 (50%), Gaps = 22/215 (10%)
Query: 67 VDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIG 123
V++++ F + +I + EG+++K L + + P RS WLKLK +Y+ +D LD++ I
Sbjct: 459 VEDIQTFLERSIADGCEGLMVKTLDEEANYTPAKRSHYWLKLKKDYMDGVTDTLDLVPIA 518
Query: 124 GYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRK 183
++G G+R G FL+A + P D Y S C++GTG DEEL+ + LKP+
Sbjct: 519 AFHGKGKRTGVFGGFLLACYD-PKADEYQ----SICKIGTGFQDEELEKLTQSLKPFVVD 573
Query: 184 YEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRSEV-FSAPYSL 238
+ P +Y+ E PDVW+ + K+ LS++ + V S +L
Sbjct: 574 DK------PRYYRAGG---EEPDVWLTEAQVWEVKAADLSVSPVHQAAVGLVDPSKGIAL 624
Query: 239 RFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQ 273
RFPR R R DK D + Q ++ + + Q
Sbjct: 625 RFPRYLRQREDKKPADATNAQQVADMYKAQSLAVQ 659
>gi|213401441|ref|XP_002171493.1| DNA ligase [Schizosaccharomyces japonicus yFS275]
gi|211999540|gb|EEB05200.1| DNA ligase [Schizosaccharomyces japonicus yFS275]
Length = 730
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 104/217 (47%), Gaps = 28/217 (12%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDV 119
A + +++EKF + +I + EG+++K L S +EP RS WLKLK +Y+ G D+
Sbjct: 513 AQSSEDIEKFLENSIHDSCEGLMVKMLDGPESHYEPSKRSRNWLKLKKDYLSGVGDSFDL 572
Query: 120 LIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 179
++IG Y+G G+R +L+ + PDT + C++GTG S+E L+ + K
Sbjct: 573 IVIGAYHGRGKRTSVYGAYLLGCYD---PDT--EMIQTICKLGTGFSEELLEKFYNQFK- 626
Query: 180 YFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPY--- 236
+ P + ++ +PDVW E K + + +D+ S V+ A
Sbjct: 627 -----DTVTLKPKEYISHSDVPAHQPDVWFEP--KYLWEILAADLSL--SPVYKAAIGYI 677
Query: 237 ------SLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 267
SLRFPR R R DK W + + E+ S
Sbjct: 678 SEDKGVSLRFPRFVREREDKNWEEATSAEQIAEMYRS 714
>gi|383852354|ref|XP_003701693.1| PREDICTED: DNA ligase 1-like [Megachile rotundata]
Length = 831
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 105/224 (46%), Gaps = 39/224 (17%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYIRA-GSDL 117
SL ++++V+ F E+++ EG+++K L + +E RS WLKLK +Y+ G L
Sbjct: 611 SLDTSSMEQVQDFLDESVKGNCEGLMVKTLEQDATYEIAKRSRNWLKLKKDYLDGVGDTL 670
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
DV++IGGY G G+R G FL+A D + S C++GTG ++E+L K
Sbjct: 671 DVVVIGGYIGKGKRTGTYGGFLLACY-----DQENEEYQSICKIGTGFTEEDLQ----KH 721
Query: 178 KPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIE--------------SPEKSIILSITSD 223
+ +++ P S+Y+ +S +PD W E SP + I
Sbjct: 722 SEFLKEHIIPTNK--SYYRY--DSSLQPDHWFEPVQVWEIKCADLSLSPVHKAAVGIVDP 777
Query: 224 IRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 267
+ I SLRFPR R+R DK D Q + +S
Sbjct: 778 EKGI---------SLRFPRFIRIRDDKNSEDATSAQQVATMYNS 812
>gi|346326802|gb|EGX96398.1| DNA ligase (Polydeoxyribonucleotide synthase) [Cordyceps militaris
CM01]
Length = 861
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 107/226 (47%), Gaps = 25/226 (11%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSD 116
S+ +DE++ F E+++ EG+++K L S +EP RS WLK+K +Y+ G
Sbjct: 636 SMDGQELDEIQVFLDESVKASCEGLMVKMLDGTESGYEPSKRSRNWLKIKKDYLAGVGDS 695
Query: 117 LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTK 176
LD++++G YYG G+R FL+A P DTY + C +GTG S++ L+ +
Sbjct: 696 LDLVVLGAYYGRGKRTSVYGAFLLA-CYNPGSDTYE----TVCNIGTGFSEQVLEELHAA 750
Query: 177 LKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE-----KSIILSITSDIRTIRSE- 230
L P FY + ++ +PDVW E P+ K+ L+++ + E
Sbjct: 751 LSAIVIDR------PKPFYAHSTGNQHQPDVWFE-PQYVWEVKTADLTLSPRYKAGCKEG 803
Query: 231 ---VFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQ 273
SLRFPR ++R DK + + E+ T+
Sbjct: 804 VDPAGGKGISLRFPRFIKIRDDKKPDEATSSRQVAEMYRKQESVTK 849
>gi|307103045|gb|EFN51310.1| hypothetical protein CHLNCDRAFT_28217 [Chlorella variabilis]
Length = 673
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 107/217 (49%), Gaps = 25/217 (11%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLII 122
+ +V+E+ +F E++E EG+++K +EP RS WLKLK +Y+ G D++ I
Sbjct: 410 SRDVEELTRFLDESVEAGTEGLIVKTTEDAYEPSKRSSHWLKLKKDYLEGVGDTFDLVPI 469
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLK---- 178
G ++G G+R G +L+A + PDT + + ++GTG S+E+L + +++
Sbjct: 470 GAWFGKGKRTGMYGSYLLAAYD---PDT--EEYQTISKIGTGFSEEQLKQLAEQMEGLVI 524
Query: 179 PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRSEVFSA 234
P +KY Y+ PDVW ++ K+ LSI+ + +V A
Sbjct: 525 PDAKKY----------YRHVLGVTLIPDVWFDAKSVWEIKAADLSISPVHKAAIGQVDPA 574
Query: 235 P-YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNG 270
S+RFPR+ RVR DK D + E+ G
Sbjct: 575 KGISIRFPRLVRVRDDKGPEDATSAEQVAEMYRKQVG 611
>gi|378733666|gb|EHY60125.1| DNA ligase 1 [Exophiala dermatitidis NIH/UT8656]
Length = 931
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 108/228 (47%), Gaps = 20/228 (8%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLI 121
++++++ E+++ EG+++K L S +EP RS WLK+K +Y+ G LD+++
Sbjct: 712 DIEQIQHLLDESVKASCEGLMVKMLDTEESGYEPSKRSRNWLKVKKDYLAGVGDSLDLVV 771
Query: 122 IGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYF 181
+G YYG G+R FL+ A + + F + C +GTG S+ L+ L
Sbjct: 772 LGAYYGKGKRTSWYGAFLLG-----AYNEETQTFETVCNIGTGFSEAILEEFYKDLS--- 823
Query: 182 RKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRSEVFSA-PY 236
E P FY + ++PDVW E+ K+ L+++ R E+
Sbjct: 824 ---ELVIDGPKPFYSHSTVKNDQPDVWFEARHVWEVKTADLTLSPRYRAAIDEMGGKNGI 880
Query: 237 SLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 284
SLRFPR + R DK + ++ E+ ++ + GG+ DD
Sbjct: 881 SLRFPRFIQRRDDKKPEEATTTKAIAEMYRKQEVVAREARSKGGVDDD 928
>gi|15222077|ref|NP_175351.1| ATP-dependent DNA ligase [Arabidopsis thaliana]
gi|332194289|gb|AEE32410.1| ATP-dependent DNA ligase [Arabidopsis thaliana]
Length = 657
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 99/198 (50%), Gaps = 21/198 (10%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYI-RAGSDL 117
+L ++++ E+++F K +I+ EG+++K L + +EP RS WLKLK +Y+ G +
Sbjct: 441 ALTSNDIGELQEFLKASIDIGCEGLMIKSLYSNATYEPAKRSNNWLKLKKDYMDNIGDSV 500
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D++ I ++G G+R G +L+A D F S C++GT SD EL + + L
Sbjct: 501 DLVPIATFHGRGKRTGFFGAYLLACY-----DVDKEEFQSICKIGTEFSDVELQDLSSSL 555
Query: 178 KPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA--- 234
P +YQV N+ PDVW+E E + + + + E
Sbjct: 556 CSKVIA------TPKQYYQVDNDL--NPDVWLEPTEVWEVKAADLTVSPVYREAIGIVDP 607
Query: 235 --PYSLRFPRIDRVRYDK 250
SLRFPR+ R+R DK
Sbjct: 608 DKGISLRFPRLVRIRKDK 625
>gi|294892161|ref|XP_002773925.1| dna ligase i, putative [Perkinsus marinus ATCC 50983]
gi|239879129|gb|EER05741.1| dna ligase i, putative [Perkinsus marinus ATCC 50983]
Length = 784
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 107/214 (50%), Gaps = 25/214 (11%)
Query: 68 DEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGG 124
+E++ FF E+++ EG++LK L + +EP RS WLKLK +Y+ +D LD++ IG
Sbjct: 580 EEIQAFFTESVDASCEGLMLKTLVENATYEPSRRSLNWLKLKKDYLSGMADSLDLVPIGA 639
Query: 125 YYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKY 184
+YG G+R G +L+A+ D + S C+V TG +DE LD K Y +
Sbjct: 640 FYGKGKRTGVYGTYLLAVY-----DANDGEYQSCCKVATGFTDEFLD----KHYDYHKDN 690
Query: 185 EYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRSEVFSAP----Y 236
P+R + Y V+ K PD+W++ + + LSI S + T S +
Sbjct: 691 VIPRRR--ADYVVSE--KMTPDIWLDGTQVWEIQCADLSI-SPVHTGASNLIDGAGGKGV 745
Query: 237 SLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNG 270
LRFPR R+R DK D + +++ G
Sbjct: 746 GLRFPRFIRIRDDKNPEDATTSEQLLQMYEQQFG 779
>gi|391869415|gb|EIT78613.1| ATP-dependent DNA ligase I [Aspergillus oryzae 3.042]
Length = 953
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 106/231 (45%), Gaps = 24/231 (10%)
Query: 67 VDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLII 122
+DE+++ ++++ EG+++K L S +EP RS WLK+K +Y+ G LD++++
Sbjct: 731 LDEIQELLDDSVKASCEGLMVKMLDTDESGYEPSKRSRNWLKVKKDYLSGVGDSLDLVVL 790
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
G YYG G+R FL+A A + + + S C +GTG S+ L+ + +L P
Sbjct: 791 GAYYGRGKRTSVYGAFLLA-----AYNANTQTYESICNIGTGFSEANLEELHKELSPLVI 845
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIES----PEKSIILSITSDIRTIRSEV-----FS 233
P FY + K++PDVW E K+ L+++ + E
Sbjct: 846 DR------PKPFYTHSTVPKDQPDVWFEPRLVWEVKTADLTLSPRYQAAADEFVGTTGGG 899
Query: 234 APYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 284
SLRFPR + R DK + E+ ++ G+ DD
Sbjct: 900 KGVSLRFPRFIKAREDKKPEQATTTRQVAEMYRKQEAVAKENAGKKGVDDD 950
>gi|83775118|dbj|BAE65241.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 882
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 106/231 (45%), Gaps = 24/231 (10%)
Query: 67 VDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLII 122
+DE+++ ++++ EG+++K L S +EP RS WLK+K +Y+ G LD++++
Sbjct: 660 LDEIQELLDDSVKASCEGLMVKMLDTDESGYEPSKRSRNWLKVKKDYLSGVGDSLDLVVL 719
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
G YYG G+R FL+A A + + + S C +GTG S+ L+ + +L P
Sbjct: 720 GAYYGRGKRTSVYGAFLLA-----AYNANTQTYESICNIGTGFSEANLEELHKELSPLVI 774
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIES----PEKSIILSITSDIRTIRSEV-----FS 233
P FY + K++PDVW E K+ L+++ + E
Sbjct: 775 DR------PKPFYTHSTVPKDQPDVWFEPRLVWEVKTADLTLSPRYQAAADEFVGTTGGG 828
Query: 234 APYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 284
SLRFPR + R DK + E+ ++ G+ DD
Sbjct: 829 KGVSLRFPRFIKARGDKKPEQATTTRQVAEMYRKQEAVAKENAGKKGVDDD 879
>gi|330835781|ref|YP_004410509.1| ATP-dependent DNA ligase [Metallosphaera cuprina Ar-4]
gi|329567920|gb|AEB96025.1| ATP-dependent DNA ligase [Metallosphaera cuprina Ar-4]
Length = 598
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 118/217 (54%), Gaps = 38/217 (17%)
Query: 62 LVAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRAGSD-LD 118
++ ++V++++++F + + + EG+++K + S ++ G R W+KLK +Y +D +D
Sbjct: 389 IMVNDVNKLKEYFYQAVADGAEGVMIKSVSPDSVYKAGSRGWLWIKLKRDYQSEMADTVD 448
Query: 119 VLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLK 178
++++G +YG G+RGG+ + L+A A P D F + C+V +G SD+ELD + K++
Sbjct: 449 LVVVGAFYGKGKRGGKFSSLLMA-AYNPEKDV----FETVCKVASGFSDQELDELQKKIE 503
Query: 179 PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP--- 235
R ++P+ ++N S PDVW+ SP +I ++I I +E+ +P
Sbjct: 504 QLKRDEKHPR-------VISNMS---PDVWV-SP------AIVAEI--IGAEITISPLHT 544
Query: 236 --------YSLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
S+RFPR R R DK D Q +E+
Sbjct: 545 CCKNDKAGLSIRFPRFVRWRDDKSPEDATTNQEIMEM 581
>gi|238493649|ref|XP_002378061.1| DNA ligase Cdc9, putative [Aspergillus flavus NRRL3357]
gi|220696555|gb|EED52897.1| DNA ligase Cdc9, putative [Aspergillus flavus NRRL3357]
Length = 953
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 108/231 (46%), Gaps = 24/231 (10%)
Query: 67 VDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLII 122
+DE+++ ++++ EG+++K L S +EP RS WLK+K +Y+ G LD++++
Sbjct: 731 LDEIQELLDDSVKASCEGLMVKMLDTDESGYEPSKRSRNWLKVKKDYLSGVGDSLDLVVL 790
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
G YYG G+R FL+A A + + + S C +GTG S+ L+ + +L P
Sbjct: 791 GAYYGRGKRTSVYGAFLLA-----AYNANTQTYESICNIGTGFSEANLEELHKELSPLV- 844
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIES----PEKSIILSITSDIRTIRSEV-----FS 233
+ PK FY + K++PDVW E K+ L+++ + E
Sbjct: 845 -IDRPK----PFYTHSTVPKDQPDVWFEPRLVWEVKTADLTLSPRYQAAADEFVGTTGGG 899
Query: 234 APYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 284
SLRFPR + R DK + E+ ++ G+ DD
Sbjct: 900 KGVSLRFPRFIKAREDKKPEQATTTRQVAEMYRKQEAVAKENAGKKGVDDD 950
>gi|332022772|gb|EGI63045.1| DNA ligase 1 [Acromyrmex echinatior]
Length = 914
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 105/215 (48%), Gaps = 21/215 (9%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRA-GSDL 117
SL A ++EVE F E+++ EG+++K L + +E RS WLKLK +Y+ G L
Sbjct: 694 SLDASTMEEVEVFLDESVKGNCEGLMVKTLEKEATYEIAKRSRNWLKLKKDYLDGVGDTL 753
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
DV++IGGY G G+R G FL+A D + S C++GTG +++L+
Sbjct: 754 DVVVIGGYIGKGKRTGTYGGFLLACY-----DLENEEYQSICKIGTGFKEDDLE----NH 804
Query: 178 KPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRSEV-F 232
+F+ + P+ S+Y+ +S PD W E + K LS++ R V
Sbjct: 805 TKFFKDHIVPQVK--SYYRF--DSSHEPDHWFEPVQVWEIKCADLSLSPVHRAAIGIVDP 860
Query: 233 SAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 267
SLRFPR R+R DK Q + ++
Sbjct: 861 EKGISLRFPRFIRIREDKTCEQATSAQDVANMYNN 895
>gi|328780199|ref|XP_392286.4| PREDICTED: DNA ligase 1-like [Apis mellifera]
Length = 677
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 108/218 (49%), Gaps = 27/218 (12%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRAGSD-L 117
SL +++V+ F E+++ EG+++K L + +E RS WLKLK +Y+ SD L
Sbjct: 458 SLDTSTMEQVQDFLDESVKGNCEGLMVKTLEEEATYEIAKRSRNWLKLKKDYLDGISDTL 517
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
DV++IGGY G G+R G FL+A D + S C++GTG S+E+L K
Sbjct: 518 DVVVIGGYIGKGKRTGTYGGFLLACY-----DQENEEYQSICKIGTGFSEEDLQ----KH 568
Query: 178 KPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSIT----SDIRTIRS 229
+F+ EY S+Y+ +S PD W E + K LS++ + I +
Sbjct: 569 TEFFK--EYIISQTKSYYRY--DSSLEPDHWFEPIQVWEIKCADLSLSPVHKAAIGIVDP 624
Query: 230 EVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 267
E SLRFPR R+R DK D Q + ++
Sbjct: 625 E---KGISLRFPRFVRIRDDKNSDDATSAQQVASMYNN 659
>gi|452988517|gb|EME88272.1| hypothetical protein MYCFIDRAFT_125670 [Pseudocercospora fijiensis
CIRAD86]
Length = 909
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 110/234 (47%), Gaps = 27/234 (11%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIR-AGSDLDV 119
+ ++E++ E+I EG+++K L S +EP RS WLK+K +Y+ AG LD+
Sbjct: 687 SREIEEIQTLLDESIAASCEGLMVKMLDGVESHYEPSRRSQNWLKVKKDYLSGAGDSLDL 746
Query: 120 LIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 179
+++G YYG G+R F +A ++ ++ + C +GTG S+ L + L P
Sbjct: 747 VVLGAYYGKGKRTNWYGAFHLACY-----NSSTEQYETVCNIGTGFSEAVLAELHETLSP 801
Query: 180 YFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE-----KSIILSITSDIRTIRSEVFS- 233
RA P FY + ++PDVW E P+ K+ L+++ R SE S
Sbjct: 802 LVI-----DRAKP-FYDHSTGKNDQPDVWFE-PKYVWEVKTADLTLSPRYRAASSEFGSD 854
Query: 234 ---APYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 284
SLRFPR RVR DK + + E+ + K G+ DD
Sbjct: 855 GVHKGVSLRFPRFIRVRDDKKPEEATTSRQVAEMYRKQESVGKDKK--AGVDDD 906
>gi|317157291|ref|XP_001826374.2| DNA ligase Cdc9 [Aspergillus oryzae RIB40]
Length = 892
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 106/231 (45%), Gaps = 24/231 (10%)
Query: 67 VDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLII 122
+DE+++ ++++ EG+++K L S +EP RS WLK+K +Y+ G LD++++
Sbjct: 670 LDEIQELLDDSVKASCEGLMVKMLDTDESGYEPSKRSRNWLKVKKDYLSGVGDSLDLVVL 729
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
G YYG G+R FL+A A + + + S C +GTG S+ L+ + +L P
Sbjct: 730 GAYYGRGKRTSVYGAFLLA-----AYNANTQTYESICNIGTGFSEANLEELHKELSPLVI 784
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIES----PEKSIILSITSDIRTIRSEV-----FS 233
P FY + K++PDVW E K+ L+++ + E
Sbjct: 785 DR------PKPFYTHSTVPKDQPDVWFEPRLVWEVKTADLTLSPRYQAAADEFVGTTGGG 838
Query: 234 APYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 284
SLRFPR + R DK + E+ ++ G+ DD
Sbjct: 839 KGVSLRFPRFIKARGDKKPEQATTTRQVAEMYRKQEAVAKENAGKKGVDDD 889
>gi|403183158|gb|EJY57894.1| AAEL017566-PA [Aedes aegypti]
Length = 905
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 100/215 (46%), Gaps = 37/215 (17%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLII 122
++DE+++F E ++ EG+++K L + +E RS WLKLK +Y+ G LD+++I
Sbjct: 689 DIDELQRFLDEAVKGNCEGLMVKTLQKEATYEIAKRSRNWLKLKKDYLSGVGDSLDLVVI 748
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEEL--------DAVV 174
GGY G G+R G FL+A D + S C++GTG SDE+L D ++
Sbjct: 749 GGYKGRGKRTGTYGGFLLACY-----DEDNEEYQSICKIGTGFSDEDLQTHTDFFKDKII 803
Query: 175 TKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIR--SEVF 232
+ K Y+R +S PD W E + +L + + +
Sbjct: 804 PRAKNYYR----------------YDSSHEPDDWFEPAQVWEVLCADLSLSPVHRAGQGI 847
Query: 233 SAP---YSLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
P SLRFPR ++R DK D + ++
Sbjct: 848 IDPEKGISLRFPRFIKIRDDKGTTDATSAKQVADM 882
>gi|405958255|gb|EKC24400.1| DNA ligase 3 [Crassostrea gigas]
Length = 878
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 106/207 (51%), Gaps = 20/207 (9%)
Query: 70 VEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYY 126
+ K FKE +E G+VLKD+ SK+EPG R WLK+K +Y+ G+ D++++G Y+
Sbjct: 480 MTKVFKEGLE----GLVLKDINSKYEPGKRH--WLKIKKDYLEQGTMADSADLVVLGAYF 533
Query: 127 GSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEY 186
G+G +GG ++ FL+ + D ++ + + +GL D+ L+ + T L K
Sbjct: 534 GTGNKGGIMSIFLLGVY-----DPSSSKWCTVTKCHSGLDDKTLEELQTSLD--MVKISK 586
Query: 187 PKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA-PYSLRFPRIDR 245
PS+ V + PD P+KS + I S ++++ +A S+RFPRI +
Sbjct: 587 NADKVPSWLNV--KKQVVPDFVTRDPKKSPVWEI-SGAEFSKADIHTADGISIRFPRITK 643
Query: 246 VRYDKPWHDCLDVQSFVELVHSSNGTT 272
R DK W + D+ L S TT
Sbjct: 644 FRDDKNWENATDLPRLRTLFKKSKETT 670
>gi|150864147|ref|XP_001382860.2| DNA ligase IV [Scheffersomyces stipitis CBS 6054]
gi|149385403|gb|ABN64831.2| DNA ligase IV [Scheffersomyces stipitis CBS 6054]
Length = 939
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 96/422 (22%), Positives = 182/422 (43%), Gaps = 74/422 (17%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDV 119
S++ ++V++ +E + +R EGIV+K L SK+ G+R+ W+K+KPEY+ + G +LD+
Sbjct: 447 SIIGSTAEDVQRAMREVVSSRSEGIVVKHLQSKYFIGERNPHWVKVKPEYLEKFGENLDL 506
Query: 120 LIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 179
+I G+ G ++ L + + F SFC V G +++E D + +
Sbjct: 507 TVI------GKVPGVKISYMCGLK-----NDDDQVFYSFCTVANGFTEDEYDKI--ERIT 553
Query: 180 YFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITS-DIRTIRSEVFSAPYSL 238
+ + Y + PPS +V N ++P WI P S++L I + I + ++ +L
Sbjct: 554 HNKWIAYKDQLPPS--KVLNFGVKKPMHWIH-PRDSVVLEIKARSIDCTVEKTYAVGTTL 610
Query: 239 RFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKK 298
+R DK HDC + EY ++ K S KK
Sbjct: 611 HNLYCRSIREDKSIHDCTTIS-----------------EYKQIKAKYSKDLEKSHSANKK 653
Query: 299 NVSIVPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHK-----MVVENGGTFS 353
+ S + +K E+ +FS F ++ + + D + + +V + GG +
Sbjct: 654 RRVLQDSFVQEQQPKRVKVESDLFSGFDFVILSDNLSRNGDRITREELIILVKKYGGNIT 713
Query: 354 MNLNNSVTH------------CVAADNKGLKYEAAKRRGDVIHYSWVLDCCSQKKLLQLQ 401
++ T C + +KG+ D++ SW+ +C ++ ++ L+
Sbjct: 714 NTVHKLGTRQTIVVTERELPTCKSYFDKGI---------DLVRPSWLFECINRVAIVPLE 764
Query: 402 PKYYLHLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNVDRSED---PKT-IDYYKK 457
P Y + + DEF D Y I Q + + DR+ P+T +D Y++
Sbjct: 765 P--YFIFGSKNMAVFKNRQDEFGDSYV-------IHQTVESWDRNRFQRLPETEVDIYRR 815
Query: 458 KY 459
++
Sbjct: 816 EF 817
>gi|307187908|gb|EFN72821.1| DNA ligase 1 [Camponotus floridanus]
Length = 870
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 108/240 (45%), Gaps = 37/240 (15%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRA-GSDL 117
S+ ++EV+ F E+++ EG+++K L + +E RS WLKLK +Y+ G L
Sbjct: 650 SMDTTTMEEVQIFLDESVKGNCEGLMVKTLEEEATYEIAKRSRNWLKLKKDYLDGVGDTL 709
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEEL------- 170
DV++IGGY G G+R G FL+A D + S C++GTG +E+L
Sbjct: 710 DVVVIGGYIGKGKRTGTYGGFLLACY-----DQENEEYQSICKIGTGFKEEDLENHTKFF 764
Query: 171 -DAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIR 225
D V+++ K Y+R +S PD W E + K LS++ R
Sbjct: 765 KDHVISQTKSYYR----------------FDSSHEPDHWFEPVQVWEIKCADLSLSPVHR 808
Query: 226 TIRSEV-FSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 284
V SLRFPR R+R DK + Q ++ ++ K ++D
Sbjct: 809 AAIGIVDPEKGISLRFPRFIRIREDKNCEEATSAQQVADMYNNQEQIKNKTSASKATEED 868
>gi|146094184|ref|XP_001467203.1| putative DNA ligase I [Leishmania infantum JPCM5]
gi|134071567|emb|CAM70256.1| putative DNA ligase I [Leishmania infantum JPCM5]
Length = 667
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 108/215 (50%), Gaps = 22/215 (10%)
Query: 67 VDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIG 123
V++++ F + +I + EG+++K L + + P RS WLKLK +Y+ +D LD++ I
Sbjct: 459 VEDMQTFLERSIADGCEGLMVKTLDEEANYTPAKRSHYWLKLKKDYMDGVTDTLDLVPIA 518
Query: 124 GYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRK 183
++G G+R G FL+A + P D Y S C++GTG DEEL+ + LKP+
Sbjct: 519 AFHGKGKRTGVFGGFLLACYD-PKADEYQ----SICKIGTGFQDEELEKLTQSLKPFVVD 573
Query: 184 YEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRSEV-FSAPYSL 238
+ P +Y+ E PDVW+ + K+ LS++ + V S +L
Sbjct: 574 DK------PRYYRAGG---EEPDVWLTEAQVWEVKAADLSVSPVHQAAVGLVDPSKGIAL 624
Query: 239 RFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQ 273
RFPR R R DK D + Q ++ + + Q
Sbjct: 625 RFPRYLRQREDKKPADATNAQQVADMYKAQSLAVQ 659
>gi|358398200|gb|EHK47558.1| hypothetical protein TRIATDRAFT_133844 [Trichoderma atroviride IMI
206040]
Length = 873
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 105/222 (47%), Gaps = 23/222 (10%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDV 119
+DE++ F E+++ EG+++K L S +EP RS WLK+K +Y+ G LD+
Sbjct: 651 GQELDEIQTFLDESVKASCEGLMVKMLDGTESGYEPSKRSRNWLKVKKDYLSGVGDSLDL 710
Query: 120 LIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 179
+++G YYG G+R FL+A P+ D Y + C +GTG S++ L+ + +L
Sbjct: 711 VVLGAYYGKGKRTSVYGAFLLA-CYNPSTDVYE----TVCNIGTGFSEQVLEDLHAQLS- 764
Query: 180 YFRKYEYPKRAPPSFYQVTNNSKERPDVWIES----PEKSIILSITSDIRTIRSEVFSAP 235
E P FY + + +PDVW E K+ L+++ + E
Sbjct: 765 -----EITIARPKPFYSHSAGGQHQPDVWFEPRYVWEVKTADLTLSPRYKAGWKEGVDPA 819
Query: 236 ----YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQ 273
SLRFPR ++R DK ++ + E+ T+
Sbjct: 820 GEKGISLRFPRFIKIRDDKKPNEATSSRQVAEMYRKQESVTK 861
>gi|302781670|ref|XP_002972609.1| hypothetical protein SELMODRAFT_97261 [Selaginella moellendorffii]
gi|300160076|gb|EFJ26695.1| hypothetical protein SELMODRAFT_97261 [Selaginella moellendorffii]
Length = 620
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/218 (33%), Positives = 107/218 (49%), Gaps = 25/218 (11%)
Query: 65 HNVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLI 121
HN + ++ F + I EG+++K L GS + P R+ WLKLK +Y+ SD LD++
Sbjct: 415 HNTEHIQDFLGQAIAASCEGLMVKALDEGSFYAPAKRAESWLKLKRDYVEGLSDSLDLVP 474
Query: 122 IGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYF 181
IG +YG+GR+ G + FL+A + PD F S CRV +G + DA ++K ++
Sbjct: 475 IGAWYGNGRKAGWHSPFLLACYD---PDQ--EVFQSVCRVMSGFT----DAFYEQMKEFY 525
Query: 182 RKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPY----- 236
+ + + PS+YQ + ERPDVW + + I I + +
Sbjct: 526 SEDKLLSKK-PSYYQ----TLERPDVWFAAAKVWEIRGADYTISPVHQAAAGLVHPDRGI 580
Query: 237 SLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQK 274
SLRFPR R DK D S ELV N T+K
Sbjct: 581 SLRFPRFVGERIDKSPEDA---TSPSELVQLFNAQTRK 615
>gi|282163283|ref|YP_003355668.1| DNA ligase [Methanocella paludicola SANAE]
gi|282155597|dbj|BAI60685.1| DNA ligase [Methanocella paludicola SANAE]
Length = 574
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 103/205 (50%), Gaps = 31/205 (15%)
Query: 45 LRSQIMAADQTGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWL 104
L + I+ D+T +P +L+ +V + FKE++++ +EG++ KDL + + PG R K +
Sbjct: 363 LETTILPLDETCKPAMALITDDVKAAQDLFKESLKSGNEGLMAKDLNATYTPGVRGKKMV 422
Query: 105 KLKPEYIRAGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTG 164
K+K LD+ I+ +G GR+ G + F VA A D +++ RV +G
Sbjct: 423 KIK----EVLDTLDLAIVSSEWGHGRKAGWLTSFEVA-----ALDENTDQYVVLGRVASG 473
Query: 165 LSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDI 224
SDE+L + +LKP E+ + +PDV +E + I
Sbjct: 474 FSDEQLQEMTERLKPLITA-EHGRIV-----------DVKPDVIVEVKFQEI-------- 513
Query: 225 RTIRSEVFSAPYSLRFPRIDRVRYD 249
+S ++S+ Y+LRFPR+ RVR D
Sbjct: 514 --QKSPIYSSGYALRFPRLVRVRDD 536
>gi|91076374|ref|XP_967954.1| PREDICTED: similar to rCG33581 [Tribolium castaneum]
gi|270002897|gb|EEZ99344.1| ligase III [Tribolium castaneum]
Length = 853
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 151/351 (43%), Gaps = 27/351 (7%)
Query: 65 HNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLI 121
H+ +++ + + ++ EG+VLKD+ S +EPG R WLK+K +Y+ G+ D+++
Sbjct: 509 HDPNDLTQMIAKVLKLGLEGLVLKDITSVYEPGKRH--WLKVKKDYLFGGAMADSADLIV 566
Query: 122 IGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYF 181
+G +YG+G++GG ++ FL+ D RF + +V TG D+ L+ + T+L
Sbjct: 567 LGAWYGTGKKGGIMSIFLMGCY-----DEANDRFCTVSKVSTGHDDKTLEKLQTELD-MV 620
Query: 182 RKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA-PYSLRF 240
+ P + P + PD P+K + IT T + EV +A S+RF
Sbjct: 621 KISSDPAKVPDWLHCTKTMV---PDFVARDPKKQPVWEITGAEFT-KHEVHTADGISIRF 676
Query: 241 PRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNV 300
PR+ ++R DK W ++ L S T G + PK+ ++ KK
Sbjct: 677 PRVTKIRDDKCWQSATSLKELKVLFAKSKEHTDVSLLLQGTAESSPKKQKTLESFVKKRG 736
Query: 301 SIVPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAY-------SLDSLHKMVVENGGTFS 353
S P V I + + YF N+ D + + G
Sbjct: 737 SEDPQSSNSKKVKKEPKTVKIINPLPDYFHNIKVVLEDKVREKQWDLIRYFIAYGGQICK 796
Query: 354 MNLNNSVTHCVAADNKGLKYEAAKRRGDVIHYS--WVLDCCSQKKLLQLQP 402
+ + TH + ++ + E + DV H + W+ +C + + +P
Sbjct: 797 HGESENATHMIHLNS--MVPEIDQCNPDVKHVTVDWIKNCVVNESVCDYRP 845
>gi|308466931|ref|XP_003095716.1| CRE-LIG-1 protein [Caenorhabditis remanei]
gi|308244481|gb|EFO88433.1| CRE-LIG-1 protein [Caenorhabditis remanei]
Length = 779
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 108/238 (45%), Gaps = 35/238 (14%)
Query: 45 LRSQIMAADQTGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSK--WEPGDRSGK 102
LRS D + S+ + DE+ FF E I+N+ EG+++K L ++ +E RS
Sbjct: 403 LRSNFKKVDGSFYFATSVDTMDTDEINSFFDEAIQNKCEGLMIKTLDTEATYEISRRSKS 462
Query: 103 WLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRV 161
WLK+K +Y+ G LD++++G Y G+G+R G +L+ P+ + Y S C++
Sbjct: 463 WLKMKKDYVDGIGDTLDLVVMGAYVGNGKRTGVYGGYLLG-CYNPSTEEYE----SVCKI 517
Query: 162 GTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKE----RPDVWIE------- 210
GTG SDE+L L+ E P +YQ K P + E
Sbjct: 518 GTGFSDEDLAEQFKILQ------EKKIEKAPMYYQFDPTLKPDDIFAPHLVFEIKCADIT 571
Query: 211 -SPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 267
SP +T D + I SLRFPR R+R DK D + +E+ S
Sbjct: 572 ISPRHKAASGLTEDGKGI---------SLRFPRFLRIRDDKNADDATSSEQVLEMYRS 620
>gi|156376850|ref|XP_001630571.1| predicted protein [Nematostella vectensis]
gi|156217595|gb|EDO38508.1| predicted protein [Nematostella vectensis]
Length = 609
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 105/219 (47%), Gaps = 37/219 (16%)
Query: 62 LVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEYIR-AGSDLD 118
+ + N +++ +F +E+I+ EG+++K D+ + +E RS WLKLK +Y+ G LD
Sbjct: 391 MTSTNTEDMAEFLEESIKGNCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLADVGDTLD 450
Query: 119 VLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEEL-------- 170
++ IGGY G G+R G FL+A D F + C++GTG +DE L
Sbjct: 451 LVPIGGYRGKGKRTGAYGGFLLACY-----DAESEEFQTICKIGTGFTDEVLESHHQFFK 505
Query: 171 DAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRT 226
D V+ K KPY+R + PD W ++ + ++ LS++ +
Sbjct: 506 DHVIDKPKPYYR----------------YDDGLEPDHWFDAVQVWEVRAADLSVSPVHKA 549
Query: 227 IRSEVFSAP-YSLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
+V SLRFPR RVR DK + D E+
Sbjct: 550 AVGQVDPVKGISLRFPRFLRVRDDKKPEEATDSTQVAEM 588
>gi|448118290|ref|XP_004203459.1| Piso0_001068 [Millerozyma farinosa CBS 7064]
gi|448120701|ref|XP_004204042.1| Piso0_001068 [Millerozyma farinosa CBS 7064]
gi|359384327|emb|CCE79031.1| Piso0_001068 [Millerozyma farinosa CBS 7064]
gi|359384910|emb|CCE78445.1| Piso0_001068 [Millerozyma farinosa CBS 7064]
Length = 940
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 91/378 (24%), Positives = 171/378 (45%), Gaps = 50/378 (13%)
Query: 68 DEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYY 126
D+++ KE I +R+EGI++K+ S++ R W+K+KPEY+ G ++D+ +IG
Sbjct: 438 DDIQNAIKEVISDRNEGIMVKNAASRYHVATRHNCWIKVKPEYLEEFGENVDLAVIGIIP 497
Query: 127 GSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEY 186
G ++ L + F SFC VG G S E + + + ++
Sbjct: 498 GIKN------AYMCGLRDYNDNGC----FRSFCTVGNGFSSYEYSQIQRITEGKWHNFQ- 546
Query: 187 PKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITS-DIRTIRSEVFSAPYSLRFPRIDR 245
+ PPS + + ++ +P WI+ P+ S++L I + I +E +S +L
Sbjct: 547 --KDPPSSHLLKFGTR-KPVSWID-PKDSVVLEIKARSIDNNHTETYSVGTTLHNLYCRS 602
Query: 246 VRYDKPWHDCLDVQSFVELVHSSNGTTQK----GKEYGGLQDDKPKQFRSSRKGEKKNVS 301
+R DK + +CL + ++EL TT K ++ L D +QF+ S K K++V
Sbjct: 603 IRKDKSYDECLTLDEYLELKQKYASTTNKEQTVARKRKRLLDSFEQQFKKS-KLRKRDV- 660
Query: 302 IVPSHFLQTDVSDIKGETSIFSDMVFYFVN---VPPA---YSLDSLHKMVVENGGTFSMN 355
+T++F D VF + +P + + + + + V ++GG ++N
Sbjct: 661 ----------------KTALFKDYVFLVASDSFLPHSNTRLTKEQIKQQVQQHGGGITLN 704
Query: 356 LNNSVTH---CVAADNKGLK-YEAAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDS 411
+ TH + +D K + + V+ Y W+ D Q + + ++P + L D+
Sbjct: 705 PYVTHTHETVVLISDRLTPKCQQYVSKNLTVLRYKWIADSIEQGRPIPVEPSHVLDSRDA 764
Query: 412 SK-KKLQEEVDEFSDLYF 428
+ Q VD + D Y
Sbjct: 765 AVLGAAQTRVDAYGDSYI 782
>gi|380029885|ref|XP_003698595.1| PREDICTED: DNA ligase 1-like, partial [Apis florea]
Length = 672
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 108/218 (49%), Gaps = 27/218 (12%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRAGSD-L 117
SL +++V+ F E+++ EG+++K L + +E RS WLKLK +Y+ SD L
Sbjct: 452 SLDTSTMEQVQDFLDESVKGNCEGLMVKTLEEEATYEIAKRSRNWLKLKKDYLDGVSDTL 511
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
DV++IGGY G G+R G FL+A D + S C++GTG S+E+L K
Sbjct: 512 DVVVIGGYIGKGKRTGTYGGFLLACY-----DQENEEYQSICKIGTGFSEEDLQ----KH 562
Query: 178 KPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSIT----SDIRTIRS 229
+F+ EY S+Y+ +S PD W E + K LS++ + + +
Sbjct: 563 TEFFK--EYIISQTKSYYRY--DSSLEPDHWFEPIQVWEIKCADLSLSPVHKAAVGIVDP 618
Query: 230 EVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 267
E SLRFPR R+R DK D Q + ++
Sbjct: 619 E---KGISLRFPRFVRIRDDKNSDDATSAQQVASMYNN 653
>gi|356542672|ref|XP_003539790.1| PREDICTED: DNA ligase 1-like [Glycine max]
Length = 776
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 103/198 (52%), Gaps = 21/198 (10%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRA-GSDL 117
++ +++V+E++ F + + EG+++K L + +EP RS WLKLK +Y+ + G L
Sbjct: 559 TITSNDVEEIQNFLDQAVGASCEGLIIKTLNEDATYEPSKRSLNWLKLKKDYMDSIGDSL 618
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D++ I ++G G+R G FL+A D F S C++GTG S +AV+ +
Sbjct: 619 DLVPIAAFHGRGKRTGVYGAFLLACY-----DNDNEEFQSICKIGTGFS----EAVLEER 669
Query: 178 KPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRSEV-F 232
R PK P ++Y+ PDVW E+ E K+ L+I+ R V
Sbjct: 670 SSSLRSKVIPK--PKAYYRFGETIN--PDVWFEASEVWEVKAADLTISPVHRAAVGIVDP 725
Query: 233 SAPYSLRFPRIDRVRYDK 250
+ SLRFPR+ RVR DK
Sbjct: 726 NKGISLRFPRLLRVRPDK 743
>gi|406864570|gb|EKD17615.1| putative DNA ligase (Polydeoxyribonucleotide synthase) [Marssonina
brunnea f. sp. 'multigermtubi' MB_m1]
Length = 918
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 111/226 (49%), Gaps = 25/226 (11%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSD 116
S+ ++E++ F E+++ EG+++K L S +EP RS WLK+K +Y+ G
Sbjct: 693 SMNGQEIEEIQIFLDESMKASCEGLMVKMLDGAESGYEPSKRSRNWLKIKKDYLSGVGDS 752
Query: 117 LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTK 176
LD++++G Y+G G+R FL+A + DTY + C +GTG S+ L+ + +
Sbjct: 753 LDLVVLGAYHGKGKRTSVYGAFLLA-SYNSTSDTYE----TICNIGTGFSEAVLETLHAE 807
Query: 177 LKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE-----KSIILSITSDIRTIRSEV 231
L P + PK FY + + +PDVW E P+ K+ L+++ + +E
Sbjct: 808 LSPLI--IDRPK----PFYSHSAGNTHQPDVWFE-PKYVWEVKTADLTLSPRYKAGCNEG 860
Query: 232 FSA----PYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQ 273
SLRFPR +VR DK + + VE+ T+
Sbjct: 861 LEGGGDKGISLRFPRFIKVRDDKKPDEATGSRQVVEMYRKQESVTK 906
>gi|15384023|gb|AAK96101.1|AF393466_39 ATP-dependent DNA ligase [uncultured crenarchaeote 74A4]
Length = 589
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 94/188 (50%), Gaps = 26/188 (13%)
Query: 77 TIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIR-AGSDLDVLIIGGYYGSGRRGGEV 135
+I EG++LK L ++ G R WLKLK EY G LD+++IGG++G GRR G
Sbjct: 396 SINAGSEGLMLKMLDKPYQAGARGSHWLKLKREYRNELGDSLDLVVIGGFFGKGRRTGSY 455
Query: 136 AQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFY 195
L+A ++ DT+P S C+VGTG +DE LD + L P + P+
Sbjct: 456 GTLLLATYDQNT-DTFP----SICKVGTGFTDESLDQLYQILNPKITIKKNPRV------ 504
Query: 196 QVTNNSKERPDVWIESPEKSIILSITSDI------RTIRSEVFS-APYSLRFPRI-DRVR 247
NS+ DVW E PE +I + S+I +T E+ +LRFP+ ++R
Sbjct: 505 ----NSEMEADVWFE-PE-LVIEVVASEITLSPIHKTAIXEIRKDTGLALRFPKFTGKIR 558
Query: 248 YDKPWHDC 255
+K D
Sbjct: 559 VEKTVEDA 566
>gi|383320642|ref|YP_005381483.1| DNA ligase I [Methanocella conradii HZ254]
gi|379322012|gb|AFD00965.1| DNA ligase I, ATP-dependent (dnl1) [Methanocella conradii HZ254]
Length = 583
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 111/226 (49%), Gaps = 31/226 (13%)
Query: 45 LRSQIMAADQTGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWL 104
L IM D+ +P +L+ V+E ++ F E+I+ +EG++ KDL + + PG R K +
Sbjct: 371 LEQNIMPVDEKCKPATALITDKVEEAQELFDESIKRGNEGLMAKDLQATYTPGVRGRKMV 430
Query: 105 KLKPEYIRAGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTG 164
K+K LD+ I+ +G GR+ G + F VA A D R++ +V +G
Sbjct: 431 KIK----EVLDTLDLAIVSAEWGHGRKAGWLTSFEVA-----AYDEENDRYLVLGKVASG 481
Query: 165 LSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDI 224
SDE+L + +LKP + +R +V + +PDV +E + I
Sbjct: 482 FSDEQLQEMTERLKPLI----HAERG-----RVVDV---KPDVIVEVKFQEI-------- 521
Query: 225 RTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNG 270
+S ++S+ Y+LRFPR+ RVR D + + + + S+G
Sbjct: 522 --QKSPIYSSGYALRFPRLVRVRDDMSPEEVNTIGRVLNIYDISHG 565
>gi|321477879|gb|EFX88837.1| hypothetical protein DAPPUDRAFT_304798 [Daphnia pulex]
Length = 677
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 101/219 (46%), Gaps = 37/219 (16%)
Query: 65 HNVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLI 121
V+E+E+F E+++ EG+++K L + +E RS WLKLK +Y+ G +D ++
Sbjct: 463 QTVEEIEEFLDESLKGNCEGLMVKGLVKDATYEIAKRSKNWLKLKKDYLDGIGDTIDAVV 522
Query: 122 IGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDA--------V 173
IGGY G G+R G FL+A D + S C++GTG SDE+ A
Sbjct: 523 IGGYLGRGKRTGLYGGFLLACY-----DEANEEYQSLCKIGTGFSDEDFQAHSDFLKNHK 577
Query: 174 VTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRS 229
+ K KPYF R PS PD W E + K LSI+ R
Sbjct: 578 IPKPKPYF-------RFDPSL---------SPDDWFEPVQVWEIKCADLSISPVHRAATG 621
Query: 230 EVFSAP-YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 267
V SLRFPR R+R DK + + +L +S
Sbjct: 622 IVDPVKGISLRFPRFIRIRPDKNPENATSSEQIADLYNS 660
>gi|159041690|ref|YP_001540942.1| ATP-dependent DNA ligase [Caldivirga maquilingensis IC-167]
gi|224487902|sp|A8MDU6.1|DNLI_CALMQ RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|157920525|gb|ABW01952.1| DNA ligase I, ATP-dependent Dnl1 [Caldivirga maquilingensis IC-167]
Length = 603
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 108/215 (50%), Gaps = 30/215 (13%)
Query: 62 LVAHNVDEVEKFFKETIENRDEGIVLKD--LGSKWEPGDRSGKWLKLKPEYIRAGSD-LD 118
++ + D +EKFF + I + EG++ K LGS +E G R W+K K +Y SD +D
Sbjct: 393 IITDDADSLEKFFLDAISSGCEGVMCKSVKLGSVYEMGARGWLWIKYKRDYKSELSDTMD 452
Query: 119 VLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLK 178
++++G ++G G+R G L+A + PD+ +F + C+VG+G +DE+L + L+
Sbjct: 453 LVVVGAFWGRGKRAGTYGALLLAAYD---PDS--DQFYTVCKVGSGFTDEDLKKLPQMLE 507
Query: 179 PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSIT------SDIRTIRSEVF 232
PY + +P+ SK PD+W +P ++L IT S + T S +
Sbjct: 508 PYKIPHRHPRVV----------SKMEPDIWF-TP--GLVLEITGAEITMSPLHTCCSVML 554
Query: 233 SAPYSL--RFPRI-DRVRYDKPWHDCLDVQSFVEL 264
L RFPR R R DK D V+ E+
Sbjct: 555 KGDVGLAIRFPRFTGRYRTDKRPEDATTVKEIFEM 589
>gi|452848459|gb|EME50391.1| hypothetical protein DOTSEDRAFT_145234 [Dothistroma septosporum
NZE10]
Length = 935
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 110/234 (47%), Gaps = 28/234 (11%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIR-AGSDLDV 119
+ ++E++ ++I+ EG+++K L S +EP RS WLK+K +Y+ AG LD+
Sbjct: 713 SREIEEIQTLLDDSIKASCEGLMVKMLDGVESHYEPSRRSQNWLKVKKDYLSGAGDSLDL 772
Query: 120 LIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 179
+++G YYG G+R F +A +T ++ + C +GTG S+ L + L P
Sbjct: 773 VVLGAYYGKGKRTNWYGAFQLACY-----NTSSEQYETVCNIGTGFSEALLAELYETLSP 827
Query: 180 YFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE-----KSIILSITSDIRTIRSEVFS- 233
RA P FY + ++PDVW E P+ K+ L+++ R SE +
Sbjct: 828 LVI-----DRAKP-FYDHSTGKNDQPDVWFE-PKFVWEVKTADLTLSPRYRAASSEFGND 880
Query: 234 ---APYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 284
SLRFPR RVR DK + E+ + GKE DD
Sbjct: 881 GTHKGVSLRFPRFIRVRDDKNAEQATSSRQVAEMYRAQESV---GKEKKPAADD 931
>gi|398410722|ref|XP_003856709.1| hypothetical protein MYCGRDRAFT_31749 [Zymoseptoria tritici IPO323]
gi|339476594|gb|EGP91685.1| hypothetical protein MYCGRDRAFT_31749 [Zymoseptoria tritici IPO323]
Length = 884
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 110/234 (47%), Gaps = 27/234 (11%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIR-AGSDLDV 119
+ ++E++ E+I+ EG+++K L S +EP RS WLK+K +Y+ AG LD+
Sbjct: 662 SREIEEIQVLLDESIKASCEGLMVKMLDGPESYYEPSRRSQNWLKVKKDYLAGAGDSLDL 721
Query: 120 LIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 179
+++G Y+G G+R F +A +T ++ + C +GTG S+ L + L P
Sbjct: 722 VVLGAYFGKGKRTNWYGAFTLACY-----NTSKEQYETVCNIGTGFSEAILAELYDLLSP 776
Query: 180 YFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE-----KSIILSITSDIRTIRSEV--- 231
+ PK FY + ++PDVW E P+ K+ L+++ R E
Sbjct: 777 L--AIDRPK----PFYAHSAGKNDQPDVWFE-PKFVWEVKTADLTLSPRYRAAAEEFGGD 829
Query: 232 -FSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 284
SLRFPR RVR DK D + E+ + K GG+ DD
Sbjct: 830 GVHKGVSLRFPRFIRVREDKKPDDATSSRQVAEMYRRQESVGKASK--GGVDDD 881
>gi|324506408|gb|ADY42738.1| DNA ligase 1 [Ascaris suum]
Length = 692
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 105/219 (47%), Gaps = 23/219 (10%)
Query: 59 CWSLV--AHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEYI-RA 113
C++L + DE+ +F E I+ EG+++K D + +E RS WLKLK +Y+
Sbjct: 468 CFALSKDTEDTDEISEFLDEAIKGNCEGLMVKTLDTDATYEIAKRSHNWLKLKKDYLDSV 527
Query: 114 GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAV 173
G LD+++IGGY G+G+R G +L+A + PD+ + S C++GTGL D++L
Sbjct: 528 GDTLDLVVIGGYCGTGKRTGVYGGYLLACYD---PDS--EEYQSICKIGTGLKDDDLSTQ 582
Query: 174 VTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESP----EKSIILSITSDIRTIRS 229
+ F K P Y +S PD W E K+ LSI+ R
Sbjct: 583 FDQ----FASLRIEKARPYYSY----DSSLEPDHWFEPSVVWEVKAADLSISPKHHAARG 634
Query: 230 EV-FSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 267
V SLRFPR R+R DK + + E+ S
Sbjct: 635 IVDPEKGISLRFPRFIRIRDDKKPEEATSAEQVAEMYRS 673
>gi|356541453|ref|XP_003539190.1| PREDICTED: DNA ligase 1-like [Glycine max]
Length = 701
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 96/193 (49%), Gaps = 37/193 (19%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYI-RAGSDL 117
++ +++V+E++KF + + EG+++K L + +EP RS WLKLK +Y+ G L
Sbjct: 510 TITSNDVEEIQKFLDQAVGASCEGLIIKTLNEDATYEPLKRSLNWLKLKKDYMDNIGDSL 569
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D++ I ++G G+R G FL+A D+ F S C++GTG S +AV+ +
Sbjct: 570 DLVPIAAFHGRGKRTGVYGAFLLACY-----DSDNEEFQSICKIGTGFS----EAVLEER 620
Query: 178 KPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYS 237
R PK P ++Y+ + PDVW E+ E S
Sbjct: 621 SSSLRSKVIPK--PKAYYRFGESI--NPDVWFEASEG---------------------IS 655
Query: 238 LRFPRIDRVRYDK 250
LRFPR+ RVR DK
Sbjct: 656 LRFPRLLRVRPDK 668
>gi|367027026|ref|XP_003662797.1| hypothetical protein MYCTH_2303831 [Myceliophthora thermophila ATCC
42464]
gi|347010066|gb|AEO57552.1| hypothetical protein MYCTH_2303831 [Myceliophthora thermophila ATCC
42464]
Length = 892
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 98/199 (49%), Gaps = 23/199 (11%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDV 119
+DE++ F E+++ EG+++K L S +EP RS WLK+K +Y+ G LD+
Sbjct: 670 GQELDEIQAFLDESVKASCEGLMVKMLDGEESGYEPSKRSRNWLKIKKDYLSGIGDSLDL 729
Query: 120 LIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 179
+++G YYG G+R FL+A P DTY + C +GTG S+ L+ + L
Sbjct: 730 VVLGAYYGKGKRTSVYGAFLLA-CYNPGTDTYE----TVCNIGTGFSEAVLEELHKSLS- 783
Query: 180 YFRKYEYPKRAPPSFYQVTNNSKERPDVWIES----PEKSIILSITSDIRTIRSEVFSAP 235
E P FY ++ S+ +PDVW E ++ L+++ + E
Sbjct: 784 -----EIVIDRPKPFYSHSSGSQHQPDVWFEPRYVWEVRTADLTLSPRYKAGMKEGVDPS 838
Query: 236 ----YSLRFPRIDRVRYDK 250
SLRFPR +VR DK
Sbjct: 839 GEKGISLRFPRFIKVRDDK 857
>gi|308808378|ref|XP_003081499.1| putative DNA ligase [Oryza sativa (ISS) [Ostreococcus tauri]
gi|116059962|emb|CAL56021.1| putative DNA ligase [Oryza sativa (ISS) [Ostreococcus tauri]
Length = 740
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 83/148 (56%), Gaps = 14/148 (9%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLII 122
+ +V+E++ F E+I+ EG+++K L + +EP RS WLKLK +Y+ G LD++ I
Sbjct: 569 SRDVEELQVFLDESIQANTEGLIVKTLDATYEPSKRSLNWLKLKKDYMEGCGDSLDLVPI 628
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
G + G G+R G +L+A + + + S C++GTG S+ L+ + + P+
Sbjct: 629 GAWVGRGKRTGVYGAYLLACYDEDGEE-----YQSICKIGTGFSEVVLEELANAMNPHVI 683
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIE 210
AP S+Y+V++ K PDVW E
Sbjct: 684 D------APRSYYKVSDAMK--PDVWFE 703
>gi|157872853|ref|XP_001684953.1| putative DNA ligase I [Leishmania major strain Friedlin]
gi|68128023|emb|CAJ06835.1| putative DNA ligase I [Leishmania major strain Friedlin]
Length = 681
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 110/225 (48%), Gaps = 30/225 (13%)
Query: 62 LVAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRAGSD-LD 118
L + V++V+ F + +I + EG+++K L + + P RS WLKLK +Y+ +D LD
Sbjct: 468 LDSEKVEDVQTFLERSIADGCEGLMVKTLEEEANYTPAKRSHYWLKLKKDYMDGVTDTLD 527
Query: 119 VLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLK 178
++ I +YG G+R G FL+A + P D Y S C++GTG DEEL+ + LK
Sbjct: 528 LVPIAAFYGKGKRTGVFGGFLLACYD-PKADEYQ----SICKIGTGFQDEELEKLTQSLK 582
Query: 179 PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRSEV-FS 233
P+ + P +Y+ E PDVW+ + K+ LS++ + V
Sbjct: 583 PFVVDEK------PRYYRAGG---EEPDVWLTEAQVWEVKAADLSVSPVHQAAVGLVDPD 633
Query: 234 APYSLRFPRIDRVRYDKPWHDCLDVQSFVELV--------HSSNG 270
+LRFPR R R DK D + + ++ H +NG
Sbjct: 634 KGIALRFPRYLRQREDKKPADATNARQVADMYKAQSLAAEHDANG 678
>gi|389639142|ref|XP_003717204.1| DNA ligase 1 [Magnaporthe oryzae 70-15]
gi|351643023|gb|EHA50885.1| DNA ligase 1 [Magnaporthe oryzae 70-15]
gi|440475490|gb|ELQ44160.1| DNA ligase 1 [Magnaporthe oryzae Y34]
gi|440485387|gb|ELQ65353.1| DNA ligase 1 [Magnaporthe oryzae P131]
Length = 896
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 102/199 (51%), Gaps = 23/199 (11%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDV 119
+DE++ F E+++ EG+++K L S +EP RS WLK+K +Y+ G LD+
Sbjct: 674 GQELDEIQTFLDESVKASCEGLMVKMLDGTESGYEPSKRSRNWLKIKKDYLSGIGDSLDL 733
Query: 120 LIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 179
+++G YYG G+R FL+A P+ D Y + C +GTG S+ L+ + T+LK
Sbjct: 734 VVLGAYYGKGKRTSVYGAFLLA-CYNPSSDKYE----TVCNIGTGFSEAVLEELHTQLKD 788
Query: 180 YFRKYEYPKRAPPSFYQVTNNSKERPDVWIES----PEKSIILSITSDIRTIRSEVF--- 232
+ PK FY ++ + +PDVW E K+ L+++ + E
Sbjct: 789 TV--IDRPK----PFYSHSSGGQHQPDVWFEPRFVWEVKTADLTLSPRYKAGCGEGVDPS 842
Query: 233 -SAPYSLRFPRIDRVRYDK 250
+ SLRFPR ++R DK
Sbjct: 843 GTKGISLRFPRFIKLRDDK 861
>gi|343427357|emb|CBQ70884.1| probable CDC9-DNA ligase I [Sporisorium reilianum SRZ2]
Length = 852
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 103/197 (52%), Gaps = 30/197 (15%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLI 121
+V+E+ F ++++ EG+++K L S +EP RS WLKLK +Y+ G LD+++
Sbjct: 636 SVEEISVFLDKSVKEGCEGLMVKMLSGPDSTYEPSRRSMNWLKLKKDYLAGTGDSLDLVV 695
Query: 122 IGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYF 181
IGGYYG G+R FL+A + F + C++GTG ++ +L+A LK
Sbjct: 696 IGGYYGKGKRTNVYGAFLLACY-----NADSETFQTICKIGTGFTELDLEAHYKTLK--- 747
Query: 182 RKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP------ 235
E A +Y V + +PDV+ E+ + + +T+D+ S V++A
Sbjct: 748 ---ELEISAKKGYYDVGD---AKPDVYFEA--RVVWEVLTADLSL--SPVYTAAKGLIEQ 797
Query: 236 --YSLRFPRIDRVRYDK 250
SLRFPR RVR DK
Sbjct: 798 RGVSLRFPRFIRVRDDK 814
>gi|223995863|ref|XP_002287605.1| ligase [Thalassiosira pseudonana CCMP1335]
gi|220976721|gb|EED95048.1| ligase [Thalassiosira pseudonana CCMP1335]
Length = 633
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 113/209 (54%), Gaps = 22/209 (10%)
Query: 70 VEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYY 126
VE+F ++ + EG+++K D+ + +EP RS WLKLK +Y+ G +D++ +G Y+
Sbjct: 423 VEEFLDNAVKGQCEGLMVKTLDVNAAYEPSRRSLNWLKLKKDYLEGLGDSVDLVPLGAYH 482
Query: 127 GSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEY 186
G G+R G +L+A+ E DT F S C++GTG S+E+L + LKP+
Sbjct: 483 GRGKRTGVYGAYLLAVYEE---DT--EEFQSVCKIGTGFSEEDLKELAASLKPHI----I 533
Query: 187 PKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRSEVFSA--PYSLRF 240
P+++ S Y V+++ + DVW ++ + K+ LS +S + + + LRF
Sbjct: 534 PEKS--SQYVVSDSLE--CDVWFDAVQVWEVKAADLSKSSTHKGAVDKTGESGRGIGLRF 589
Query: 241 PRIDRVRYDKPWHDCLDVQSFVELVHSSN 269
PR +RVR DK D +++ ++ +
Sbjct: 590 PRFERVRPDKKPEDATSADQILDMYYNQD 618
>gi|121698847|ref|XP_001267826.1| DNA ligase Cdc9, putative [Aspergillus clavatus NRRL 1]
gi|119395968|gb|EAW06400.1| DNA ligase Cdc9, putative [Aspergillus clavatus NRRL 1]
Length = 879
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 111/233 (47%), Gaps = 24/233 (10%)
Query: 65 HNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVL 120
++++E++ ++++ EG+++K L S +EP RS WLK+K +Y+ G LD++
Sbjct: 655 NDLEEIQTLLDDSVKASCEGLMVKMLDTEESGYEPSKRSRNWLKVKKDYLAGVGDSLDLV 714
Query: 121 IIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPY 180
++G Y+G G+R FL+A A ++ + + + C +GTG S+ L+ +L P
Sbjct: 715 VLGAYHGRGKRTSVYGAFLLA-----AYNSSTQTYETVCNIGTGFSEAALEEFYQELSPL 769
Query: 181 FRKYEYPKRAPPSFYQVTNNSKERPDVWIES----PEKSIILSITSDIRTIRSEVFSAP- 235
+ PK FY + K++PDVW E K+ L+++ + E
Sbjct: 770 --TIDRPK----PFYSHSTVPKDQPDVWFEPRLVWEVKTADLTLSPRYKAAADEFMGTAG 823
Query: 236 ----YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 284
SLRFPR + R DK ++ E+ ++ GG+ DD
Sbjct: 824 GGKGVSLRFPRFIKSRDDKKPDQATTTRAVAEMYRKQEAVLKESSGKGGVDDD 876
>gi|46122151|ref|XP_385629.1| hypothetical protein FG05453.1 [Gibberella zeae PH-1]
Length = 867
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 103/200 (51%), Gaps = 25/200 (12%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDV 119
+DE++ F E+++ EG+++K L S +EP RS WLK+K +Y+ G LD+
Sbjct: 645 GQELDEIQVFLDESVKASCEGLMVKMLDGDESGYEPSKRSRNWLKIKKDYLSGVGDSLDL 704
Query: 120 LIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 179
+++G YYG G+R FL+A P++ ++ + C +GTG S++ L+ + +L
Sbjct: 705 VVLGAYYGKGKRTSVYGAFLLACYN---PNS--EKYETVCNIGTGFSEQVLEDLHMQLS- 758
Query: 180 YFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE-----KSIILSITSDIRTIRSEVFSA 234
E P FY ++ + +PDVW E P+ K+ L+++ + E +
Sbjct: 759 -----EITIDRPKPFYSHSSGGQHQPDVWFE-PKYVWEVKTADLTLSPRYKAGAQEGVDS 812
Query: 235 P----YSLRFPRIDRVRYDK 250
SLRFPR RVR DK
Sbjct: 813 SGTKGISLRFPRFIRVRDDK 832
>gi|20089613|ref|NP_615688.1| DNA ligase (ATP) [Methanosarcina acetivorans C2A]
gi|74533835|sp|Q8TSR7.1|DNLI1_METAC RecName: Full=DNA ligase 1; AltName: Full=Polydeoxyribonucleotide
synthase [ATP] 1
gi|19914533|gb|AAM04168.1| DNA ligase (ATP) [Methanosarcina acetivorans C2A]
Length = 580
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 106/217 (48%), Gaps = 37/217 (17%)
Query: 63 VAHNVDEVEKFFKETIENRDEGIVLKDLGSK--WEPGDRSGKWLKLKPEYIRAGSD-LDV 119
V N++E+E FF ET+E EGIV K + S +E G RS WLK K EY + D+
Sbjct: 382 VTENIEELEDFFNETVEKGLEGIVAKSMSSNSVYEAGKRSWLWLKWKQEYSEGMRETFDL 441
Query: 120 LIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 179
+++G YYG G+R G L A+ + ++F +F +VGTG ++ + + + + L
Sbjct: 442 VVVGSYYGKGKRKGSFGALLCAVL-----NEEEQQFETFTKVGTGFTEADAEEINSLLSA 496
Query: 180 YFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP---- 235
+ E PK V PD++IE ++++ + + SE+ ++P
Sbjct: 497 H-TVSEAPK-------NVIIKKGMLPDIFIEP---AVVIEV------LGSEITNSPGHTA 539
Query: 236 --------YSLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
+LRFPR R+RYD+ D V+ +L
Sbjct: 540 GEGEEETGLALRFPRFLRIRYDRAPFDATTVREIRDL 576
>gi|386783456|pdb|4EQ5|A Chain A, Dna Ligase From The Archaeon Thermococcus Sibiricus
Length = 571
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 101/204 (49%), Gaps = 31/204 (15%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVL 120
+L+ + +E E F+ + ++ EG++ K L S +EPG+R KWLK+KP +LD++
Sbjct: 388 NLITKSPEEAEAFYHKALDLGHEGLMAKRLDSTYEPGNRGKKWLKIKPTM----ENLDLV 443
Query: 121 IIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPY 180
++G +G GRR G ++ FL+ A D F+ +VG+G +DE+L LKP
Sbjct: 444 VLGAEWGEGRRSGVLSSFLLG-----AYDPVKGDFVPVGKVGSGFTDEDLVEFTKMLKPL 498
Query: 181 FRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRF 240
+K + KE +E K +I +I+ +S + + ++LRF
Sbjct: 499 IKK---------------EHGKE-----VELEPKVVIEVAYQEIQ--KSPKYESGFALRF 536
Query: 241 PRIDRVRYDKPWHDCLDVQSFVEL 264
PR +R DK D VQ EL
Sbjct: 537 PRYIALREDKGPEDADTVQRLAEL 560
>gi|313216156|emb|CBY37517.1| unnamed protein product [Oikopleura dioica]
Length = 951
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 108/223 (48%), Gaps = 27/223 (12%)
Query: 67 VDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAG--SDLDVLIIGG 124
+DE++ F + +++ EG+++K L +E RS WLKLK +Y+ +G +DVL++G
Sbjct: 745 IDELQVFLDQAVKDSTEGLMVKALEDSYEISKRSHSWLKLKKDYLGSGVADSVDVLVMGA 804
Query: 125 YYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKY 184
YYG G+R G FL+ + D + + C++GTGL+DE LK + +
Sbjct: 805 YYGKGKRSGNYGGFLLGVF-----DADNEEYQTVCKLGTGLTDE-------NLKLFTERL 852
Query: 185 EYPKRAPPSFYQVTNNSKERPDVWIESPE-----KSIILSITSDIRTIRSEVF--SAPYS 237
+ K S+Y++ S DV+ E PE K LSI S + T + + + S
Sbjct: 853 DKIKSEKKSYYRLGGVS---ADVYFE-PEMVWEIKCADLSI-SPVHTAATGLADPAKGIS 907
Query: 238 LRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGG 280
LRFPR R R DK E+ ++S Q GG
Sbjct: 908 LRFPRFIRERDDKSPEMATSADQIYEM-YNSQDVIQNSAARGG 949
>gi|165969038|ref|YP_001650938.1| DNA ligase [Orgyia leucostigma NPV]
gi|164663534|gb|ABY65754.1| DNA ligase [Orgyia leucostigma NPV]
Length = 608
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 113/233 (48%), Gaps = 29/233 (12%)
Query: 42 LSQLRSQIMAADQTGEPCWSLVAHNVDEVEKF---FKETIENRDEGIVLKDLGSKWEPGD 98
L+ +R+++M A+ HNV E+ + + EG+++K L K+EPG
Sbjct: 371 LTPVRNRVMLAE----------THNVTTHEQLVCLLNDAVNRHLEGLMVKPLLGKYEPGK 420
Query: 99 RSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRF 155
R +WLK+K +Y+ G +D++++G G+G++GG+++ FL+ DT+
Sbjct: 421 R--RWLKIKKDYLCNGEMADSIDLVVLGAQMGTGKKGGQLSIFLMG-CRNEEDDTW---- 473
Query: 156 ISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKS 215
++ +V +G +D + + + KLKP + E PP++ + N + PD P++
Sbjct: 474 VAITKVHSGFTDSDFNVLQNKLKPLMVRIE----TPPAWLKC--NKRILPDYVAVDPKRM 527
Query: 216 IILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSS 268
+ I T + S+RFPR+ VR DK W +Q L +S
Sbjct: 528 PVWQIIGSQLTKSNSHTPDGVSVRFPRVSSVREDKNWRTASTLQQIRVLYETS 580
>gi|407926519|gb|EKG19486.1| DNA ligase ATP-dependent [Macrophomina phaseolina MS6]
Length = 985
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 108/221 (48%), Gaps = 26/221 (11%)
Query: 65 HNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVL 120
+ +DE+++ +++++ EG+++K L S +EP RS WLK+K +Y+ G LD++
Sbjct: 767 NELDEIQELLEKSVKASCEGLMVKMLDGPESSYEPSKRSQNWLKVKKDYLSGVGDSLDLV 826
Query: 121 IIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPY 180
++G Y+G G+R FL+A +T + + C +GTG SDE L ++ +L +
Sbjct: 827 VLGAYFGRGKRTSVYGAFLLACY-----NTTTESYETVCNIGTGFSDEVLASLHEQLSQH 881
Query: 181 FRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA------ 234
+ PK FY + +K++PDVW E K + T+D+ T+ +A
Sbjct: 882 I--IDRPK----PFYSHSQGNKDQPDVWFEP--KFVWEVKTADL-TLSPRYMAAMDALGV 932
Query: 235 --PYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQ 273
SLRFPR R DK + E+ T+
Sbjct: 933 GKGVSLRFPRFIHQREDKKPEQATSARQVAEMYRKQEAVTK 973
>gi|357621098|gb|EHJ73055.1| hypothetical protein KGM_05634 [Danaus plexippus]
Length = 917
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 108/230 (46%), Gaps = 20/230 (8%)
Query: 83 EGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGGEVAQFL 139
EG+VLKDL S ++PG R WLK+K +Y+ G+ D++++G ++G+G++GG ++ FL
Sbjct: 535 EGLVLKDLESTYDPGKRH--WLKVKKDYLFDGAMADTADLIVLGAWFGTGKKGGMMSVFL 592
Query: 140 VALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTN 199
+ D + ++++ +V TG D L+ + +L P K P++
Sbjct: 593 MGCL-----DKFRNKWVTVTKVHTGHDDSTLERLQKELSPLMVKISQDSNKVPNWLDCKK 647
Query: 200 NSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQ 259
PD P+K + IT T + + S+RFPR+ R+R DK W +++
Sbjct: 648 GM--IPDFVAADPKKQPVWEITGTELTKANLHTADGISVRFPRVTRIRDDKNWETATNLE 705
Query: 260 SFVELVHSSNGTTQKG--KEYGGLQDD------KPKQFRSSRKGEKKNVS 301
L +S T + DD KPKQ + K + VS
Sbjct: 706 ELKHLYKASKEKTDVSLLNKLAATADDYVPPEKKPKQSPKTAKNKTSPVS 755
>gi|302903161|ref|XP_003048798.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256729732|gb|EEU43085.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 856
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 100/199 (50%), Gaps = 23/199 (11%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDV 119
++E++ F E+++ EG+++K L S +EP RS WLK+K +Y+ G LD+
Sbjct: 634 GQELEEIQVFLDESVKASCEGLMVKMLDGRESGYEPSKRSRNWLKIKKDYLSGVGDSLDL 693
Query: 120 LIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 179
+++G YYG G+R FL+A P DTY + C +GTG S++ L+ + +L
Sbjct: 694 VVLGAYYGKGKRTSVYGAFLLA-CYNPNSDTYE----TVCNIGTGFSEQVLEDLHKQLS- 747
Query: 180 YFRKYEYPKRAPPSFYQVTNNSKERPDVWIES----PEKSIILSITSDIRTIRSEVF--- 232
E P FY ++ + +PDVW E K+ L+++ + E
Sbjct: 748 -----EITIDRPKPFYSHSSGGQHQPDVWFEPRYVWEVKTADLTLSPRYKAGAKEGVDPS 802
Query: 233 -SAPYSLRFPRIDRVRYDK 250
+ SLRFPR R+R DK
Sbjct: 803 GTKGISLRFPRFIRIRDDK 821
>gi|432911802|ref|XP_004078727.1| PREDICTED: DNA ligase 1-like [Oryzias latipes]
Length = 974
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 109/219 (49%), Gaps = 21/219 (9%)
Query: 45 LRSQIMAADQTGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGK 102
LR M + S+ + + D + +F ++++ + EG+++K L + +E RS
Sbjct: 759 LRDSFMEVEGEFMFARSIDSDSTDAIAEFLEQSVRDSCEGLMVKTLEKDATYEIAKRSHN 818
Query: 103 WLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRV 161
WLKLK +Y+ G +D+ +IG Y G G+R G FL+A D F S C++
Sbjct: 819 WLKLKKDYLDGVGDTVDLCVIGAYLGKGKRTGTYGGFLLACY-----DDENEEFQSVCKI 873
Query: 162 GTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSII 217
GTG DE+L+ LK + PK P ++Y+V +++ PDVW+++ + K
Sbjct: 874 GTGFKDEDLEQHYKFLKEHI----LPK--PRAYYRVDQSAE--PDVWLDAVQVWEVKCAD 925
Query: 218 LSITSDIRTIRSEV-FSAPYSLRFPRIDRVRYDKPWHDC 255
LS++ + V SLRFPR R+R DK D
Sbjct: 926 LSLSPVYKAAMGLVDPEKGISLRFPRFLRIRDDKKPEDA 964
>gi|242398869|ref|YP_002994293.1| DNA ligase [Thermococcus sibiricus MM 739]
gi|242265262|gb|ACS89944.1| DNA ligase [Thermococcus sibiricus MM 739]
Length = 560
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 101/204 (49%), Gaps = 31/204 (15%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVL 120
+L+ + +E E F+ + ++ EG++ K L S +EPG+R KWLK+KP +LD++
Sbjct: 377 NLITKSPEEAEAFYHKALDLGHEGLMAKRLDSTYEPGNRGKKWLKIKPTM----ENLDLV 432
Query: 121 IIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPY 180
++G +G GRR G ++ FL+ A D F+ +VG+G +DE+L LKP
Sbjct: 433 VLGAEWGEGRRSGVLSSFLLG-----AYDPVKGDFVPVGKVGSGFTDEDLVEFTKMLKPL 487
Query: 181 FRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRF 240
+K + KE +E K +I +I+ +S + + ++LRF
Sbjct: 488 IKK---------------EHGKE-----VELEPKVVIEVAYQEIQ--KSPKYESGFALRF 525
Query: 241 PRIDRVRYDKPWHDCLDVQSFVEL 264
PR +R DK D VQ EL
Sbjct: 526 PRYIALREDKGPEDADTVQRLAEL 549
>gi|409095358|ref|ZP_11215382.1| ATP-dependent DNA ligase [Thermococcus zilligii AN1]
Length = 559
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 99/206 (48%), Gaps = 31/206 (15%)
Query: 59 CWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLD 118
LV +E E+F+K+ +E EG++ K L S +EPG+R KWLK+KP +LD
Sbjct: 374 AQQLVTKKAEEAEEFYKKALELGHEGLMAKRLDSVYEPGNRGKKWLKIKPTM----ENLD 429
Query: 119 VLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLK 178
++IIG +G G+R + FLVA A D F+ +VG+G +DE+L+ LK
Sbjct: 430 LVIIGAEWGEGKRAHLLGSFLVA-----AYDPNRGEFVPVGKVGSGFTDEDLEEFTEMLK 484
Query: 179 PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSL 238
P + E F ++ P V IE + I +S + + ++L
Sbjct: 485 PLIVREE------GKFVEI------EPRVVIEVTYQEI----------QKSPKYESGFAL 522
Query: 239 RFPRIDRVRYDKPWHDCLDVQSFVEL 264
RFPR +R DK + ++ EL
Sbjct: 523 RFPRYVALREDKSPEEADTIERISEL 548
>gi|332157848|ref|YP_004423127.1| ATP-dependent DNA ligase [Pyrococcus sp. NA2]
gi|331033311|gb|AEC51123.1| ATP-dependent DNA ligase [Pyrococcus sp. NA2]
Length = 559
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 102/205 (49%), Gaps = 33/205 (16%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVL 120
+L+ V+E E+F+K +E EG++ K L + +EPG+R KWLK+KP +LD++
Sbjct: 376 NLITRKVEEAEEFYKRALEMGHEGLMAKRLDAVYEPGNRGKKWLKIKPTM----ENLDLV 431
Query: 121 IIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPY 180
IIG +G GRR + F++ A D F+ +VG+G +D++L LKP
Sbjct: 432 IIGAEWGEGRRAHLLGSFILG-----AYDPETGEFVEVGKVGSGFTDDDLLEFTKMLKPL 486
Query: 181 FRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSIT-SDIRTIRSEVFSAPYSLR 239
K E + VW++ I++ +T +I+ +S + + ++LR
Sbjct: 487 IIKEEGKR------------------VWVQP---KIVIEVTYQEIQ--KSPKYKSGFALR 523
Query: 240 FPRIDRVRYDKPWHDCLDVQSFVEL 264
FPR +R DK D ++ +L
Sbjct: 524 FPRYVALRDDKSPEDADTIERIAQL 548
>gi|440639060|gb|ELR08979.1| hypothetical protein GMDG_00597 [Geomyces destructans 20631-21]
Length = 930
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 108/217 (49%), Gaps = 25/217 (11%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSD 116
S+ +DE++ F ++++ EG+++K L S +EP RS WLK+K +Y+ G
Sbjct: 707 SMNGQEIDEIQTFLDDSVKASCEGLMVKMLDGVESGYEPSKRSRNWLKIKKDYLAGIGDS 766
Query: 117 LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTK 176
LD++++G Y+G G+R FL+A P T R+ + C +GTG S+E L+ + +
Sbjct: 767 LDLVVLGAYHGKGKRTSVYGAFLLACYN---PST--ERYETVCNIGTGFSEEVLETLHAQ 821
Query: 177 LKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIES----PEKSIILSITSDIRTIRSEVF 232
L + PK FY+ + + +PDVW E ++ L+++ R E
Sbjct: 822 LADTV--IDRPK----PFYEHSKVNAHQPDVWFEPRFVWEVRTADLTLSPKYRAGYKEGI 875
Query: 233 SAP-----YSLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
AP SLRFPR ++R DK + + E+
Sbjct: 876 -APNAEKGVSLRFPRFIKIRDDKKVDEATTSRQIAEM 911
>gi|383875391|pdb|3RR5|A Chain A, Dna Ligase From The Archaeon Thermococcus Sp. 1519
Length = 570
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 99/203 (48%), Gaps = 31/203 (15%)
Query: 62 LVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVLI 121
LV V+E E F+K +E EG++ K L S +EPG+R KWLK+KP +LD++I
Sbjct: 388 LVTKKVEEAEAFYKRALELGHEGLMAKRLDSVYEPGNRGKKWLKIKPTM----ENLDLVI 443
Query: 122 IGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYF 181
IG +G GRR + FLVA + PD+ F+ +VG+G +DE+L LKP
Sbjct: 444 IGAEWGEGRRAHLLGSFLVAAYD---PDS--GEFLPVGKVGSGFTDEDLVEFTKMLKPLI 498
Query: 182 RKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFP 241
+ E F ++ P V IE + I +S + + ++LRFP
Sbjct: 499 LREE------GKFVEI------EPKVVIEVTYQEI----------QKSPKYRSGFALRFP 536
Query: 242 RIDRVRYDKPWHDCLDVQSFVEL 264
R +R DK + ++ +L
Sbjct: 537 RYVALREDKSPEEADTIERIAQL 559
>gi|348666069|gb|EGZ05897.1| hypothetical protein PHYSODRAFT_532805 [Phytophthora sojae]
Length = 3954
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 105/223 (47%), Gaps = 39/223 (17%)
Query: 67 VDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIG 123
VD+V F +E + EG+++K L + +EP +RS KWLKLK +Y+ G D++ IG
Sbjct: 707 VDKVRTFLEEAVRENCEGLMVKTLEKEATYEPANRSHKWLKLKKDYLDGIGDSADLVPIG 766
Query: 124 GYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRK 183
++G G+R G +L+A + PDT + ++GTGLSDE L +LK
Sbjct: 767 AFHGRGKRTGVYGAYLLACYD---PDT--EMYQPITKLGTGLSDEVLKQFHDQLKEKV-- 819
Query: 184 YEYPKRAPPSFYQVTNNSKERPDVWIE--------------SPEKSIILSITSDIRTIRS 229
KR PS Y + K PDVW E SP+ + + + ++ + I
Sbjct: 820 --VDKR--PSDYAIGEGIK--PDVWFEASCVWEILGADLSISPKYTAAIGLVAEDKGI-- 871
Query: 230 EVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTT 272
SLRFPR R+R DK + +L + TT
Sbjct: 872 -------SLRFPRFIRIRDDKDTTQATNSSQIADLYRAQGLTT 907
>gi|18640216|ref|NP_570290.1| SPV130 DNA ligase-like ptorein [Swinepox virus]
gi|18448623|gb|AAL69869.1| SPV130 DNA ligase-like ptorein [Swinepox virus]
Length = 559
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 110/226 (48%), Gaps = 22/226 (9%)
Query: 42 LSQLRSQIMAADQTGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSG 101
+ ++R +IM +D + DE++ F K+ I+ EG+VLK L ++PG++
Sbjct: 349 IYEIRHKIMLSDIR-------CINKKDELDTFIKDVIQKGLEGLVLKGLYDSYKPGNKG- 400
Query: 102 KWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISF 158
WLK+K +YI GS +D++++G YYG G RGG + FL+ + P+ + ++
Sbjct: 401 -WLKIKKDYILNGSIADSVDLVVLGSYYGKGSRGGIQSIFLMGCYD---PNDCKWKTVTK 456
Query: 159 CRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIIL 218
C +G +E L + +L + K A +T N PD ++ P S +
Sbjct: 457 C---SGHDEETLKQIQEELDVI----KISKDASKIPKWLTINKAYYPDFIVKDPRSSPVW 509
Query: 219 SITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
IT T S+ + S+RFPR R+R DK W ++Q L
Sbjct: 510 EITGSGFTSSSQHTANGISIRFPRFARIRNDKNWISATNLQELEHL 555
>gi|358379416|gb|EHK17096.1| hypothetical protein TRIVIDRAFT_183439 [Trichoderma virens Gv29-8]
Length = 854
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 104/222 (46%), Gaps = 23/222 (10%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSK---WEPGDRSGKWLKLKPEYIRA-GSDLDV 119
+DE++ F E+++ EG+++K L K +EP RS WLK+K +Y+ G LD+
Sbjct: 632 GQELDEIQTFLDESVKASCEGLMVKMLDGKESGYEPSKRSRNWLKIKKDYLSGVGDSLDL 691
Query: 120 LIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 179
+++G YYG G+R FL+A + DTY + C +GTG S++ L+ + +L
Sbjct: 692 VVLGAYYGKGKRTSVYGAFLLA-CYNASTDTYE----TVCNIGTGFSEQVLEDLYAQLS- 745
Query: 180 YFRKYEYPKRAPPSFYQVTNNSKERPDVWIES----PEKSIILSITSDIRTIRSEVFSAP 235
+ P FY + + +PDVW E K+ L+++ + E
Sbjct: 746 -----QITIARPKPFYSHSTGGQHQPDVWFEPRYVWEVKTADLTLSPRYKAGWKEGVDPA 800
Query: 236 ----YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQ 273
SLRFPR ++R DK + + E+ T+
Sbjct: 801 GEKGISLRFPRFIKIRDDKKPDEATSSRQVAEMYRKQESVTK 842
>gi|322697185|gb|EFY88968.1| DNA ligase (Polydeoxyribonucleotide synthase [ATP]) [Metarhizium
acridum CQMa 102]
Length = 899
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 105/222 (47%), Gaps = 23/222 (10%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDV 119
+DE++ F E+++ EG+++K L S +EP RS WLK+K +Y+ G LD+
Sbjct: 677 GQELDEIQLFLDESVKASCEGLMVKMLDGTESGYEPSKRSRNWLKVKKDYLAGVGDSLDL 736
Query: 120 LIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 179
+++G Y+G G+R FL+A PA DTY + C +GTG S++ L+ + +L
Sbjct: 737 VVLGAYHGRGKRTSVYGAFLLA-CYNPANDTYE----TVCNIGTGFSEQVLEELHAQLS- 790
Query: 180 YFRKYEYPKRAPPSFYQVTNNSKERPDVWIES----PEKSIILSITSDIRTIRSEVFSAP 235
E P FY + + +PDVW E K+ L+++ + E
Sbjct: 791 -----EIVIDRPKPFYSHSAGGQHQPDVWFEPRYVWEVKTADLTLSPRYKAGCKEGVDPA 845
Query: 236 ----YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQ 273
SLRFPR ++R DK + + E+ T+
Sbjct: 846 GDKGISLRFPRFIKIRDDKRPDEATSSRQIAEMYRKQESVTK 887
>gi|50306293|ref|XP_453119.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74606642|sp|Q6CSH0.1|DNLI4_KLULA RecName: Full=DNA ligase 4; AltName: Full=DNA ligase IV; AltName:
Full=Polydeoxyribonucleotide synthase [ATP] 4
gi|49642253|emb|CAH00215.1| KLLA0D01089p [Kluyveromyces lactis]
Length = 907
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 122/508 (24%), Positives = 216/508 (42%), Gaps = 91/508 (17%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLII 122
A N + ++ ++ I EGIVLK L SK+ G R+ W+K+KPEY+ + G ++D+LII
Sbjct: 419 AINAEAIKDSLEQAISMGSEGIVLKHLHSKYFVGSRNTDWIKIKPEYLEQFGENMDLLII 478
Query: 123 GGYYGSGRRGGEVAQFLVAL--------AERPAPDTYPRRFISFCRVGTGLSDEELDAVV 174
GR G+ F L AE+P RFISFC + GLS+EE +
Sbjct: 479 ------GREQGKKDSFFCGLSISDPNEVAEKP-------RFISFCTIANGLSNEEFKDIE 525
Query: 175 TKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITS---DIRTIRSEV 231
K + K+ PPS + +K P WI PE S++L + + D +
Sbjct: 526 RKT---WGKWHIFSEDPPSPNLLGFGTK-VPYEWIH-PEDSVVLEVKARAIDTKESEKRK 580
Query: 232 FSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRS 291
+ + +L F ++RYDK W F ++ + N ++ + D K
Sbjct: 581 YRSGCTLHFGYCKQIRYDKDWKTVASFSEFEDMKDARNFYNKRKSH--QVTDGK------ 632
Query: 292 SRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVF-----YFVNVP-PAYSLDSLHKMV 345
R ++ + IV S V+ + ++ FS+ F YF + S + L ++
Sbjct: 633 KRASKRAKIGIVNSSEPTALVAPV---SNTFSNCRFRVISDYFDSTKRRRISQEDLCSVI 689
Query: 346 VENGG--TFSMNLNNSVTHCVAADNKGLKYEAAKR--------RGDVIHYSWVLDCCSQK 395
+E+GG ++ + NN + DN + E R + +I SW+ C +
Sbjct: 690 LEHGGEIVYTSDENN-----LPQDNLYIIGEKLTRECKILLNAKNLIIRPSWIFSCIEEG 744
Query: 396 KLLQLQPKYYLHLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNVDRS-EDPKTIDY 454
K SD + +L+ +D ++ D + A + LL +R ++P +
Sbjct: 745 Y------KTPFTESDIFRGELESSMD--CSQFYTDFNTASLNHLLETANRGIKNPDS--- 793
Query: 455 YKKKYCPQDKWSCFHGCCIYFYHSTEPLSPDWEVLLGLALRRLKLEISFHGGKVCNNLAN 514
P+ F + +S E +L ++ ++ I HGG++ ++ N
Sbjct: 794 --DLLLPEVPLFLFSNLKLAVLNS--------ENVLDTSILEVEFAIKCHGGELV-HIEN 842
Query: 515 ATHVVVLSVLGYDVNFNSLTESFTAREK 542
A+ ++V + +F S + F+ R+K
Sbjct: 843 ASIIIVFN------DFISREDLFSLRQK 864
>gi|303388481|ref|XP_003072475.1| DNA ligase [Encephalitozoon intestinalis ATCC 50506]
gi|303301615|gb|ADM11115.1| DNA ligase [Encephalitozoon intestinalis ATCC 50506]
Length = 589
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 95/190 (50%), Gaps = 22/190 (11%)
Query: 68 DEVEKFFKETIENRDEGIVLKDLGS--KWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGG 124
+E E FF E++E EG+++K LGS + P RS KW+K+K +Y+ SD LD++++G
Sbjct: 388 EESEMFFNESVEKGFEGMMIKILGSDATYLPSQRSNKWIKIKKDYLEGMSDSLDLVVMGA 447
Query: 125 YYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKY 184
YYG G+R G FL+ + + +F + C++GTG D L + +L
Sbjct: 448 YYGKGKRAGFYGGFLLGVY-----NDEEEKFEALCKIGTGFDDNILSRLYEQLSSNL--- 499
Query: 185 EYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRSEVFSAPYSLRF 240
+ P Y + K PDVW+E+ K+ LS+ S I SLRF
Sbjct: 500 ----CSAPKNYSYKESVK--PDVWVEAKYVWEVKAAGLSL-SPIYNAGGNRNEKGISLRF 552
Query: 241 PRIDRVRYDK 250
PR R R DK
Sbjct: 553 PRFLREREDK 562
>gi|240103775|ref|YP_002960084.1| ATP-dependent DNA ligase [Thermococcus gammatolerans EJ3]
gi|239911329|gb|ACS34220.1| ATP-dependent DNA ligase (lig) [Thermococcus gammatolerans EJ3]
Length = 559
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 97/203 (47%), Gaps = 31/203 (15%)
Query: 62 LVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVLI 121
LV VDE E+F+K +E EG++ K L + +EPG+R KWLK+KP +LD++I
Sbjct: 377 LVTKKVDEAEEFYKRALELGHEGLMAKRLDAIYEPGNRGKKWLKIKPTM----ENLDLVI 432
Query: 122 IGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYF 181
IG +G GRR + FLV A D F+ +VG+G +DE+L LKP
Sbjct: 433 IGAEWGEGRRAHLLGSFLVG-----AYDPESGEFVPVGKVGSGFTDEDLVEFTKMLKPLI 487
Query: 182 RKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFP 241
+ E F ++ P V IE + I +S + + ++LRFP
Sbjct: 488 IREE------GKFVEI------EPKVVIEVTYQEI----------QKSPKYKSGFALRFP 525
Query: 242 RIDRVRYDKPWHDCLDVQSFVEL 264
R +R DK + ++ +L
Sbjct: 526 RYVALREDKSPEEADTIERVAQL 548
>gi|299115435|emb|CBN75600.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1043
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 103/196 (52%), Gaps = 29/196 (14%)
Query: 70 VEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYIRA-----GSDLDVLII 122
+E+F E ++ EG+++K L S +EP RS WLKLK +Y++A G LD++ I
Sbjct: 822 IEEFLSEAVKGNCEGLMVKTLTANSSYEPSKRSLNWLKLKKDYLQADGGGVGDSLDLVPI 881
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
G ++G G+R G+ +L+A E PD + S C++GTG +DE L++ +LK
Sbjct: 882 GAFFGKGKRTGKYGAYLLACYE---PDR--EEYQSVCKIGTGFTDEILNSFWEELK---- 932
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPE-----KSIILSITSDIRTIRSEVFSAP-- 235
E+ P +Y V ++ PDVW+ +P K LS + + ++ P
Sbjct: 933 --EHTVEQRPRYYNVADSLS--PDVWL-APHKVWEVKCADLSKSPVHKAAIGKIAQEPDR 987
Query: 236 -YSLRFPRIDRVRYDK 250
S+RFPR+ R R DK
Sbjct: 988 GISIRFPRLLREREDK 1003
>gi|224590086|gb|ACN59570.1| thermostable ATP-dependent DNA ligase [Thermococcus sp. 1519]
Length = 559
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 99/203 (48%), Gaps = 31/203 (15%)
Query: 62 LVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVLI 121
LV V+E E F+K +E EG++ K L S +EPG+R KWLK+KP +LD++I
Sbjct: 377 LVTKKVEEAEAFYKRALELGHEGLMAKRLDSVYEPGNRGKKWLKIKPTM----ENLDLVI 432
Query: 122 IGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYF 181
IG +G GRR + FLVA + PD+ F+ +VG+G +DE+L LKP
Sbjct: 433 IGAEWGEGRRAHLLGSFLVAAYD---PDS--GEFLPVGKVGSGFTDEDLVEFTKMLKPLI 487
Query: 182 RKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFP 241
+ E F ++ P V IE + I +S + + ++LRFP
Sbjct: 488 LREE------GKFVEI------EPKVVIEVTYQEI----------QKSPKYRSGFALRFP 525
Query: 242 RIDRVRYDKPWHDCLDVQSFVEL 264
R +R DK + ++ +L
Sbjct: 526 RYVALREDKSPEEADTIERIAQL 548
>gi|300176568|emb|CBK24233.2| unnamed protein product [Blastocystis hominis]
Length = 645
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 103/213 (48%), Gaps = 23/213 (10%)
Query: 65 HNVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYIR-AGSDLDVLI 121
++ ++++ F E++ N EG+++K L + +EP RS WLKLK +Y++ G +D++
Sbjct: 437 NDTEKIQAFLLESVANGCEGLMIKTLEENATYEPSKRSLNWLKLKKDYLQDLGDSMDLVP 496
Query: 122 IGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRV-GTGLSDEELDAVVTKLKPY 180
IGGYYG G+R G FL+A D F S C+V GTG SD+ L + +
Sbjct: 497 IGGYYGKGKRTGNFGAFLLACF-----DESSEEFQSICKVIGTGFSDDALK----QYSEF 547
Query: 181 FRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRSEVFSA-- 234
F P F N PDVW+ + ++ LSI S + T + A
Sbjct: 548 FSNGNLLDHKLPIF---NVNPSVEPDVWLNPVQVWEVRAADLSI-SPVHTAAIGLVDADK 603
Query: 235 PYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 267
+LRFPR R+R DK + + V+ S
Sbjct: 604 GIALRFPRFVRIREDKKPEEATTAEQVVDFYKS 636
>gi|329765374|ref|ZP_08256954.1| DNA ligase I, ATP-dependent Dnl1 [Candidatus Nitrosoarchaeum limnia
SFB1]
gi|329138280|gb|EGG42536.1| DNA ligase I, ATP-dependent Dnl1 [Candidatus Nitrosoarchaeum limnia
SFB1]
Length = 578
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 114/235 (48%), Gaps = 26/235 (11%)
Query: 30 NDGICVCVHVYMLSQLRSQIMAADQTGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKD 89
ND C+ +L +I+ D + + +N +++E+F + +I + EG++LK
Sbjct: 338 NDKSCLEFPYKKRRELLEKIVKEDDYAKHVPMTIINNQEDIEEFLENSINSGCEGVMLKM 397
Query: 90 LGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAP 148
L ++ G R WLKLK EY G LD+++IG ++G GRR G+ L+A +
Sbjct: 398 LDKPYQAGSRGSYWLKLKREYRNELGDSLDLVVIGAFFGKGRRTGKYGTLLLA-----SY 452
Query: 149 DTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVW 208
D F S C+VGTG +D++LD + L + P+ +S+ DVW
Sbjct: 453 DYDRDMFTSICKVGTGFTDDDLDQLYQILSDKVTIKKNPRI----------DSEMEADVW 502
Query: 209 IESPEKSIILSITSDI------RTIRSEVFS-APYSLRFPRI-DRVRYDKPWHDC 255
E PE +I + S+I + R+E+ +LRFP+ ++R +K D
Sbjct: 503 FE-PE-LVIEIVASEITLSPIHKAARNEIRKDTGLALRFPKFTGKIRLEKDPEDA 555
>gi|430811313|emb|CCJ31236.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 488
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 107/207 (51%), Gaps = 31/207 (14%)
Query: 60 WSLVAHN----VDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYI- 111
+S V N +++++ F +++I++ EG+++K L S +EP RS WLKLK +Y+
Sbjct: 284 FSFVQFNDLKSLEDIQVFLEKSIQDSCEGLMIKMLDGEESGYEPSKRSRNWLKLKKDYMS 343
Query: 112 RAGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELD 171
G LD++++GG+YG G+R +L+ E P Y S C++GTG SDE L+
Sbjct: 344 NIGDSLDLVVLGGFYGRGKRTNTYGAYLLGCYE-PDKGVYE----SICKLGTGFSDEVLE 398
Query: 172 AVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIE--------SPEKSIILSITSD 223
+ T + K++ S+Y + E+PDVW E + + SI +
Sbjct: 399 SYTTFFNNHILKHK------KSYYHHSAKG-EQPDVWFEPVAVWEVLAADLSISPKYLAA 451
Query: 224 IRTIRSEVFSAPYSLRFPRIDRVRYDK 250
+ + S+ SLRFPR RVR DK
Sbjct: 452 VGMVDSD---KGISLRFPRHIRVRDDK 475
>gi|158299989|ref|XP_319999.3| AGAP009222-PA [Anopheles gambiae str. PEST]
gi|157013784|gb|EAA15024.3| AGAP009222-PA [Anopheles gambiae str. PEST]
Length = 752
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 96/215 (44%), Gaps = 37/215 (17%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLII 122
++DE+++F E + EG+++K L + +E RS WLKLK +Y+ G LD+++I
Sbjct: 536 DLDELQRFLDEAVRGNCEGLMVKTLAREATYEIAKRSRNWLKLKKDYLTGVGDSLDLVVI 595
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDA--------VV 174
GGY G G+R G FL+A D + + C++GTG SD++L V+
Sbjct: 596 GGYRGRGKRTGTYGGFLLACY-----DEENEEYQTICKIGTGFSDDDLQRHTEFFRSHVI 650
Query: 175 TKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA 234
KPY+R + + PD W E + +L + +
Sbjct: 651 AAAKPYYR----------------HEANVVPDDWFEPVQVWEVLCADLSLSPVHRAGIGI 694
Query: 235 -----PYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
SLRFPR RVR DK D + E+
Sbjct: 695 IDPEKGISLRFPRFIRVREDKGVTDATSARQVSEM 729
>gi|393795129|ref|ZP_10378493.1| ATP-dependent DNA ligase I [Candidatus Nitrosoarchaeum limnia BG20]
Length = 590
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 111/221 (50%), Gaps = 26/221 (11%)
Query: 44 QLRSQIMAADQTGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKW 103
+L +I+ D+ + + +N +++E+F + +I + EG++LK L ++ G R W
Sbjct: 364 ELLEKIVKEDEYAKHVPMTIINNQEDIEEFLENSINSGCEGVMLKMLDKPYQAGSRGSYW 423
Query: 104 LKLKPEYI-RAGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVG 162
LKLK EY G LD+++IG ++G GRR G+ L+A + D F S C+VG
Sbjct: 424 LKLKREYRNELGDSLDLVVIGAFFGKGRRTGKYGTLLLA-----SYDYDRDMFTSICKVG 478
Query: 163 TGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITS 222
TG +D++LD + L + P+ +S+ DVW E PE +I + S
Sbjct: 479 TGFTDDDLDQLYQILSDKVTIKKNPRI----------DSEMEADVWFE-PE-LVIEIVAS 526
Query: 223 DI------RTIRSEVFS-APYSLRFPRI-DRVRYDKPWHDC 255
+I + R+E+ +LRFP+ ++R +K D
Sbjct: 527 EITLSPIHKAARNEIRKDTGLALRFPKFTGKIRLEKDPEDA 567
>gi|301625480|ref|XP_002941929.1| PREDICTED: DNA ligase 1 [Xenopus (Silurana) tropicalis]
Length = 1040
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 98/202 (48%), Gaps = 39/202 (19%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLII 122
N DE+ +F ++I++ EG+++K L + +E RS WLKLK +Y+ G LD+++I
Sbjct: 826 NTDEISEFLDQSIKDSCEGLMVKTLEQDATYEIAKRSHNWLKLKKDYLEGVGDTLDLVVI 885
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
G Y G G+R G FL+A + D + + C++GTG +DE+L+ LK +
Sbjct: 886 GAYLGKGKRTGIYGGFLLA-----SYDEESEEYQTICKIGTGFTDEDLEKHYNYLKDHVI 940
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIE--------------SPEKSIILSITSDIRTIR 228
+P S+Y+ +S PD W + SP L + D + I
Sbjct: 941 D------SPRSYYRW--DSATEPDHWFDPVQVWEVKCADLSISPVHKAALGLVEDEKGI- 991
Query: 229 SEVFSAPYSLRFPRIDRVRYDK 250
SLRFPR R+R DK
Sbjct: 992 --------SLRFPRFLRIRDDK 1005
>gi|198427151|ref|XP_002124805.1| PREDICTED: similar to ligase I [Ciona intestinalis]
Length = 1060
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 108/218 (49%), Gaps = 40/218 (18%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLII 122
+ D++ +F +E+I+ EG+++K L + +E RS WLKLK +Y+ G LD+++I
Sbjct: 845 DTDKIAEFLEESIKGNCEGLMVKTLDDDATYEIAKRSHNWLKLKKDYLDGVGDTLDLVVI 904
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEEL-DAVVTKLKPYF 181
GGY G G+R G FL+A D + + C++GTG SD+ L D + +F
Sbjct: 905 GGYKGKGKRVGNYGGFLLACY-----DEESEEYQTICKIGTGFSDQNLADHAI-----FF 954
Query: 182 RKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRSEVFSAP-- 235
++ + P S+Y++ + D W E + K+ LS+ S V++A
Sbjct: 955 NQHLIDQ--PKSYYRLNGSDA---DQWFEPVQVWEVKAADLSV--------SPVYAAANG 1001
Query: 236 -------YSLRFPRIDRVRYDKPWHDCLDVQSFVELVH 266
SLRFPR R+R DK + + Q +L H
Sbjct: 1002 IIDPERGISLRFPRFIRIRDDKKPEEATNSQQVADLYH 1039
>gi|145351064|ref|XP_001419907.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580140|gb|ABO98200.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 664
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 80/148 (54%), Gaps = 14/148 (9%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLII 122
+ ++DE++ F E+I EG+++K L + +EP RS WLKLK +Y+ G LD++ I
Sbjct: 454 SRDIDELQGFLDESIAENTEGLIVKTLDATYEPSKRSLNWLKLKKDYMEGCGDSLDLVPI 513
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
G + G G+R G +L+A D + S C++GTG S+ L+ + + P+
Sbjct: 514 GAWLGRGKRTGVYGAYLLACF-----DEDGEEYQSICKIGTGFSEVILEELANAMNPHVI 568
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIE 210
P S+Y+V++ K PDVW E
Sbjct: 569 D------GPRSYYKVSDAMK--PDVWFE 588
>gi|196017042|ref|XP_002118368.1| hypothetical protein TRIADDRAFT_34086 [Trichoplax adhaerens]
gi|190579027|gb|EDV19135.1| hypothetical protein TRIADDRAFT_34086 [Trichoplax adhaerens]
Length = 707
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 101/199 (50%), Gaps = 23/199 (11%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRA-GSDL 117
S ++ + +E+ +F E+I+ EG+++K L + +E RS WLKLK +Y+ G L
Sbjct: 488 SRISADTEEIGEFLDESIKGNCEGLMVKTLQIEATYEIAKRSHSWLKLKKDYLEGVGDTL 547
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D+++IGGY G G+R G FL+A + F S C++GTG D EL+ L
Sbjct: 548 DLVVIGGYLGKGKRTGTYGGFLLACY-----NDEDEEFQSICKIGTGFKDVELEQHTNFL 602
Query: 178 KPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRSEVFS 233
K + P S+Y+ +S +PD W E+ + K LSI S + + +
Sbjct: 603 K------QQTIEKPKSYYRY--DSSVQPDHWFEAVQVWEVKVADLSI-SPVHKAAAGIVD 653
Query: 234 AP--YSLRFPRIDRVRYDK 250
SLRFPR R+R DK
Sbjct: 654 PEKGISLRFPRFLRIRDDK 672
>gi|400601191|gb|EJP68834.1| DNA ligase I [Beauveria bassiana ARSEF 2860]
Length = 856
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 107/225 (47%), Gaps = 23/225 (10%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSD 116
S+ +D+++ F E+++ EG+++K L S +EP RS WLK+K +Y+ G
Sbjct: 631 SMDGQELDDIQVFLDESVKASCEGLMVKMLDGTESGYEPSKRSRNWLKIKKDYLSGVGDS 690
Query: 117 LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTK 176
LD++++G YYG G+R FL+A P DTY + C +GTG S++ L+ +
Sbjct: 691 LDLVVLGAYYGRGKRTSVYGAFLLA-CYNPNSDTYE----TVCNIGTGFSEQVLEELHAS 745
Query: 177 LKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRSE-- 230
L + PK FY + ++ +PDVW E K+ L+++ + E
Sbjct: 746 LSALV--IDRPK----PFYAHSAGNQHQPDVWFEPQHVWEVKTADLTLSPRYKAGCKEGV 799
Query: 231 --VFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQ 273
SLRFPR ++R DK + + E+ T+
Sbjct: 800 DPAGGKGISLRFPRFIKIRDDKKPDEATSSRQVAEMYRKQESVTK 844
>gi|340905275|gb|EGS17643.1| DNA ligase-like protein [Chaetomium thermophilum var. thermophilum
DSM 1495]
Length = 863
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 111/228 (48%), Gaps = 33/228 (14%)
Query: 42 LSQLRSQIMAADQTGEPCWSLVAH----NVDEVEKFFKETIENRDEGIVLKDLG---SKW 94
L + R + A Q E ++ H +++++ F E+++ EG+++K L S +
Sbjct: 615 LRERRELMYKAFQPVEGEFAFATHMNSQELEDIQAFLDESVKASCEGLMVKMLDGEESGY 674
Query: 95 EPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPR 153
EP RS WLK+K +Y+ G LD++++G YYG G+R FL+A P +TY
Sbjct: 675 EPSKRSRNWLKIKKDYLSGVGDSLDLVVLGAYYGKGKRTSVYGAFLLA-CYNPIKETYE- 732
Query: 154 RFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE 213
+ C +GTG SD L+ + +L E P FY ++ ++ +PDVW E
Sbjct: 733 ---TVCNIGTGFSDSVLEELYKQLS------EIVIDRPKPFYSHSSTAQHQPDVWFEP-- 781
Query: 214 KSIILSITSDIRTIRSEVFSAPY-----------SLRFPRIDRVRYDK 250
+ + T+D+ T+ + Y SLRFPR +VR DK
Sbjct: 782 RYVWEVKTADL-TLSPRYKAGMYEGVDPSGEKGISLRFPRFIKVRDDK 828
>gi|403299139|ref|XP_003940347.1| PREDICTED: DNA ligase 1-like isoform 1 [Saimiri boliviensis
boliviensis]
Length = 918
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 110/237 (46%), Gaps = 38/237 (16%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEYIRA-GSDL 117
SL +V+++ +F ++++++ EG++LK D+ + +E RS WLK+K +Y+ G L
Sbjct: 696 SLDTKDVEQIAEFLEQSVKDSCEGLMLKTLDVDATYEIAKRSHNWLKMKKDYLSGVGDTL 755
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDA----- 172
D+++IG Y G G+R G FL+A E + + C++GTG SD+EL+A
Sbjct: 756 DLVVIGAYLGRGKRAGRYGGFLLACYEEDS-----EELQAICKLGTGFSDDELEAHHQSL 810
Query: 173 ---VVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIR 225
V+ +PY R + PD W++ K LS++
Sbjct: 811 QALVLPSPRPYVR----------------TDDAVTPDHWLDPSAVWEVKCADLSLSPIYP 854
Query: 226 TIRSEVFS-APYSLRFPRIDRVRYDK-PWHDCLDVQSFVELVHSSNGTTQKGKEYGG 280
R V S SLRFPR RVR DK P Q S Q+G+E G
Sbjct: 855 AARGLVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQSQIQNQQGEEDTG 911
>gi|296812721|ref|XP_002846698.1| DNA ligase [Arthroderma otae CBS 113480]
gi|238841954|gb|EEQ31616.1| DNA ligase [Arthroderma otae CBS 113480]
Length = 890
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 111/235 (47%), Gaps = 29/235 (12%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLI 121
+++E++ E+++ EG+++K L S +EP RS WLK+K +Y+ G LD+++
Sbjct: 666 DLEEIQTMLDESVKASCEGLMVKMLDTEDSGYEPSKRSRNWLKVKKDYLAGIGDSLDLVV 725
Query: 122 IGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYF 181
+G Y+G G+R FL+A A +T + + + C +GTG S+ L+ + L P
Sbjct: 726 LGAYFGRGKRTSVYGAFLLA-----AYNTKTQNYETICNIGTGFSEALLEELHETLSPLV 780
Query: 182 RKYEYPKRAPPSFYQVTNNSKERPDVWIESPE-----KSIILSITSDIRTIRSEVF---- 232
P FY + K++PDVW E P+ K+ L+++ EV
Sbjct: 781 ID------KPKPFYSHSTVPKDQPDVWFE-PKFVWEVKAADLTLSPRYSAASDEVMGNTG 833
Query: 233 ---SAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 284
+ SLRFPR + R DK ++ E+ T+ + G + DD
Sbjct: 834 GSTAKGISLRFPRYIKARDDKKPDQATTTKAVAEMYRRQESVTKDASK-GAVDDD 887
>gi|403299143|ref|XP_003940349.1| PREDICTED: DNA ligase 1-like isoform 3 [Saimiri boliviensis
boliviensis]
Length = 887
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 110/237 (46%), Gaps = 38/237 (16%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEYIRA-GSDL 117
SL +V+++ +F ++++++ EG++LK D+ + +E RS WLK+K +Y+ G L
Sbjct: 665 SLDTKDVEQIAEFLEQSVKDSCEGLMLKTLDVDATYEIAKRSHNWLKMKKDYLSGVGDTL 724
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDA----- 172
D+++IG Y G G+R G FL+A E + + C++GTG SD+EL+A
Sbjct: 725 DLVVIGAYLGRGKRAGRYGGFLLACYEEDS-----EELQAICKLGTGFSDDELEAHHQSL 779
Query: 173 ---VVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIR 225
V+ +PY R + PD W++ K LS++
Sbjct: 780 QALVLPSPRPYVR----------------TDDAVTPDHWLDPSAVWEVKCADLSLSPIYP 823
Query: 226 TIRSEVFS-APYSLRFPRIDRVRYDK-PWHDCLDVQSFVELVHSSNGTTQKGKEYGG 280
R V S SLRFPR RVR DK P Q S Q+G+E G
Sbjct: 824 AARGLVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQSQIQNQQGEEDTG 880
>gi|401426011|ref|XP_003877490.1| putative DNA ligase I [Leishmania mexicana MHOM/GT/2001/U1103]
gi|322493735|emb|CBZ29025.1| putative DNA ligase I [Leishmania mexicana MHOM/GT/2001/U1103]
Length = 767
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 106/215 (49%), Gaps = 22/215 (10%)
Query: 67 VDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIG 123
V++V+ F + +I + EG+++K L + + P RS WLKLK +Y+ +D LD++ I
Sbjct: 559 VEDVQTFLERSIADGCEGLMVKTLEEEANYTPAKRSHYWLKLKKDYMDGVTDTLDLVPIA 618
Query: 124 GYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRK 183
+YG G+R G FL+A + P D Y S C++GTG DEEL+ + LK +
Sbjct: 619 AFYGKGKRTGVFGGFLLACYD-PKADEYQ----SICKIGTGFQDEELEKLTQSLKSFVVD 673
Query: 184 YEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRSEV-FSAPYSL 238
+ P +Y+ E PDVW+ + K+ LS++ + V + +L
Sbjct: 674 DK------PRYYRAGG---EEPDVWLTEAQVWEVKAADLSVSPVHQAAVGLVDPNKGIAL 724
Query: 239 RFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQ 273
RFPR R R DK D Q ++ + + Q
Sbjct: 725 RFPRYLRQREDKKPADATSAQQVADMYKAQSSAAQ 759
>gi|321262088|ref|XP_003195763.1| DNA ligase [Cryptococcus gattii WM276]
gi|317462237|gb|ADV23976.1| DNA ligase, putative [Cryptococcus gattii WM276]
Length = 803
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 108/213 (50%), Gaps = 38/213 (17%)
Query: 68 DEVEKFFKETIENRDEGIVLKDL---GSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIG 123
+E++ F +E++++ EG+++K L S +EP RS WLKLK +Y+ G LD++++G
Sbjct: 592 EEIQAFLEESVKDGCEGLMVKMLTSEASTYEPSRRSMNWLKLKKDYLSGVGDSLDLVVVG 651
Query: 124 GYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRK 183
Y+G G+R FL+A + PD+ + + C++GTG S+E ++TK
Sbjct: 652 AYHGKGKRTAVYGAFLLACYD---PDS--EHYQTICKIGTGFSEE----ILTKF------ 696
Query: 184 YEYPKRAPPSFYQVTNNSKE----RPDVWIESPEKSIILSITSDIRTIRSEVFSAPY--- 236
YE K P V E +PDVW E + + +T+D+ S V++A +
Sbjct: 697 YELLK---PLELGVVRGDIEVGGAKPDVWFEP--RVVWEVLTADLSL--SPVYAAAHGVI 749
Query: 237 -----SLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
SLRFPR R+R DK + + E
Sbjct: 750 DSRGISLRFPRFIRIRDDKSADEATTAEQVCEF 782
>gi|70606581|ref|YP_255451.1| ATP-dependent DNA ligase [Sulfolobus acidocaldarius DSM 639]
gi|449066802|ref|YP_007433884.1| ATP-dependent DNA ligase [Sulfolobus acidocaldarius N8]
gi|449069075|ref|YP_007436156.1| ATP-dependent DNA ligase [Sulfolobus acidocaldarius Ron12/I]
gi|76364175|sp|Q4JAM1.1|DNLI_SULAC RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|68567229|gb|AAY80158.1| thermostable DNA ligase [Sulfolobus acidocaldarius DSM 639]
gi|449035310|gb|AGE70736.1| ATP-dependent DNA ligase [Sulfolobus acidocaldarius N8]
gi|449037583|gb|AGE73008.1| ATP-dependent DNA ligase [Sulfolobus acidocaldarius Ron12/I]
Length = 598
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 111/209 (53%), Gaps = 23/209 (11%)
Query: 67 VDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIG 123
V+E+ ++F + I + EG+++K +G S ++ G R W+KLK +Y +D +D++I+G
Sbjct: 393 VNELVEYFHQAISDGTEGVIVKSIGKDSIYQAGARGFLWIKLKKDYQSEMADSVDLVIVG 452
Query: 124 GYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRK 183
+YG G+RGG+++ L+A A P DT F + C+V +G SD EL+ V + +
Sbjct: 453 AFYGRGKRGGKLSSLLMA-AYDPDKDT----FYTVCKVASGFSDAELEEV----QKMLSE 503
Query: 184 YEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILS--IT-SDIRTIRSEVFS--APYSL 238
+ K+ P S+ +PD+W++ + I+ IT S + T V S A S+
Sbjct: 504 AKLDKKDPRV------ESEIQPDIWVKPKYVAEIIGAEITLSPLHTCCKGVVSEEAGLSI 557
Query: 239 RFPRIDRVRYDKPWHDCLDVQSFVELVHS 267
RFPR R R DK + +E+ S
Sbjct: 558 RFPRFIRWRDDKSVEEATTPNEILEMYQS 586
>gi|408397149|gb|EKJ76299.1| hypothetical protein FPSE_03554 [Fusarium pseudograminearum CS3096]
Length = 886
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 103/200 (51%), Gaps = 25/200 (12%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDV 119
+DE++ F E+++ EG+++K L S +EP RS WLK+K +Y+ G LD+
Sbjct: 664 GQELDEIQVFLDESVKASCEGLMVKMLDGDESGYEPSKRSRNWLKIKKDYLSGVGDSLDL 723
Query: 120 LIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 179
+++G YYG G+R FL+A P++ ++ + C +GTG S++ L+ + +L
Sbjct: 724 VVLGAYYGKGKRTSVYGAFLLACYN---PNS--EKYETVCNIGTGFSEQVLEDLHKQLS- 777
Query: 180 YFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE-----KSIILSITSDIRTIRSEVF-- 232
E P FY ++ + +PD+W E P+ K+ L+++ + E
Sbjct: 778 -----EITIDRPKPFYSHSSGGQHQPDIWFE-PKYVWEVKTADLTLSPRYKAGAQEGVDP 831
Query: 233 --SAPYSLRFPRIDRVRYDK 250
+ SLRFPR RVR DK
Sbjct: 832 SGNKGISLRFPRFIRVRDDK 851
>gi|403222948|dbj|BAM41079.1| DNA ligase 1 precursor [Theileria orientalis strain Shintoku]
Length = 733
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 101/201 (50%), Gaps = 29/201 (14%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLGSK--WEPGDRSGKWLKLKPEYIRAGSD-LDVLII 122
++D+++ F K ++ EG+++K L K +EP RS KWLK K +YI SD +D++ +
Sbjct: 533 SLDDIDDFLKMAVQESCEGLMIKTLDDKATYEPQARSNKWLKFKKDYISGMSDSVDLVPM 592
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
G +YG G+R FL+A+ + P + Y C+ GTG +D+ L + L+
Sbjct: 593 GAFYGKGKRTNVYGSFLLAVYD-PIQEIYQ----GVCKTGTGFNDQTLKELHDSLQ---- 643
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEK---------SIILSITSDIRTIRSEVFS 233
+ PS Y+V++ K PDVW SPEK SI T+ R +E
Sbjct: 644 --NNVVNSKPSNYEVSD--KMVPDVWF-SPEKVWECKCADLSISPVYTAANRLTTNE--- 695
Query: 234 APYSLRFPRIDRVRYDKPWHD 254
LRFPR RVR DK D
Sbjct: 696 KGIGLRFPRFLRVREDKKPED 716
>gi|403299141|ref|XP_003940348.1| PREDICTED: DNA ligase 1-like isoform 2 [Saimiri boliviensis
boliviensis]
Length = 850
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 110/237 (46%), Gaps = 38/237 (16%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEYIRA-GSDL 117
SL +V+++ +F ++++++ EG++LK D+ + +E RS WLK+K +Y+ G L
Sbjct: 628 SLDTKDVEQIAEFLEQSVKDSCEGLMLKTLDVDATYEIAKRSHNWLKMKKDYLSGVGDTL 687
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDA----- 172
D+++IG Y G G+R G FL+A E + + C++GTG SD+EL+A
Sbjct: 688 DLVVIGAYLGRGKRAGRYGGFLLACYEEDS-----EELQAICKLGTGFSDDELEAHHQSL 742
Query: 173 ---VVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIR 225
V+ +PY R + PD W++ K LS++
Sbjct: 743 QALVLPSPRPYVR----------------TDDAVTPDHWLDPSAVWEVKCADLSLSPIYP 786
Query: 226 TIRSEVFS-APYSLRFPRIDRVRYDK-PWHDCLDVQSFVELVHSSNGTTQKGKEYGG 280
R V S SLRFPR RVR DK P Q S Q+G+E G
Sbjct: 787 AARGLVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQSQIQNQQGEEDTG 843
>gi|311257832|ref|XP_003127315.1| PREDICTED: DNA ligase 1 [Sus scrofa]
Length = 921
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 102/198 (51%), Gaps = 21/198 (10%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEYIRAGSD-L 117
SL + D++ +F ++++++ EG+++K D+ + +E RS WLKLK +Y+ SD L
Sbjct: 700 SLDTKDTDQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDGVSDTL 759
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D+++IG Y G G+R G FL+A + D + C++GTG SDEEL+A L
Sbjct: 760 DLVVIGAYLGRGKRAGRYGGFLLA-----SYDEESEELQAICKLGTGFSDEELEAHHQSL 814
Query: 178 KPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRSEVFS 233
+ AP S+ V + PD W++ K LS++ R V S
Sbjct: 815 QALVLP------APRSY--VRADGAVAPDHWLDPSAVWEVKCADLSLSPIYPAARGLVDS 866
Query: 234 AP-YSLRFPRIDRVRYDK 250
SLRFPR RVR DK
Sbjct: 867 EKGISLRFPRFIRVRDDK 884
>gi|15790019|ref|NP_279843.1| DNA ligase [Halobacterium sp. NRC-1]
gi|169235742|ref|YP_001688942.1| DNA ligase (ATP) [Halobacterium salinarum R1]
gi|14423678|sp|Q9HR35.1|DNLI_HALSA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|224487884|sp|B0R4C9.1|DNLI_HALS3 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|10580445|gb|AAG19323.1| DNA ligase [Halobacterium sp. NRC-1]
gi|167726808|emb|CAP13594.1| DNA ligase (ATP) [Halobacterium salinarum R1]
Length = 561
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 89/189 (47%), Gaps = 31/189 (16%)
Query: 62 LVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVLI 121
LV + DE+ F +E EGI+LK+ + + PGDR WLK KP+ LD+++
Sbjct: 384 LVTDDADEIAAFEATALEGGHEGIMLKNPAAPYTPGDRGKDWLKRKPDV----ETLDLVV 439
Query: 122 IGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYF 181
G +G GRR + FL++ A D F + +V TGL+DEEL A+ +L+P+
Sbjct: 440 TGAEWGEGRRASVLGTFLLS-----ARDAAGDGFETIGKVATGLTDEELAALSDRLEPHV 494
Query: 182 RKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFP 241
R + P V +E + I S T +S+ Y+LRFP
Sbjct: 495 RSED------------GQTVDIEPAVVLEVGYEEIQASPT----------YSSGYALRFP 532
Query: 242 RIDRVRYDK 250
R VR DK
Sbjct: 533 RFVSVREDK 541
>gi|390604378|gb|EIN13769.1| DNA ligase I [Punctularia strigosozonata HHB-11173 SS5]
Length = 811
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 110/231 (47%), Gaps = 33/231 (14%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDL---GSKWEPGDRSGKWLKLKPEYIRA-GSDLDV 119
+ + ++++ F +E++++ EG+++K L S +EP RS WLKLK +Y+ G D+
Sbjct: 592 SQSTEDIQSFLEESVKDGCEGLMVKMLETEASFYEPSRRSVNWLKLKKDYLAGVGDSFDL 651
Query: 120 LIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 179
+++G YYG G+R FL+A D + + C++GTG S++ L LKP
Sbjct: 652 VVVGAYYGKGKRTNVYGAFLLACY-----DADSEEYQTICKIGTGFSEDALQQHYDTLKP 706
Query: 180 YFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP---- 235
+ P ++ +PDVW+E K + + +D+ S +++A
Sbjct: 707 ------LEQSKPRGDIKIGGA---KPDVWLEP--KVVWEVLAADLSL--SPIYTAAQGLV 753
Query: 236 ----YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS---SNGTTQKGKEYG 279
SLRFPR RVR DK D + E+ + G + K K G
Sbjct: 754 EDRGVSLRFPRFIRVRDDKDAEDATAPEQIAEMYERQALAQGNSGKKKRSG 804
>gi|71985269|ref|NP_741625.2| Protein LIG-1, isoform a [Caenorhabditis elegans]
gi|66774195|sp|Q27474.2|DNL1_CAEEL RecName: Full=DNA ligase 1; AltName: Full=DNA ligase I; AltName:
Full=Polydeoxyribonucleotide synthase [ATP] 1
gi|54110912|emb|CAA98242.2| Protein LIG-1, isoform a [Caenorhabditis elegans]
Length = 773
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 110/230 (47%), Gaps = 25/230 (10%)
Query: 45 LRSQIMAADQTGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSK--WEPGDRSGK 102
LR+ D + S+ ++ DE+ FF E ++N+ EG+++K L ++ +E RS
Sbjct: 401 LRTNFKKIDGSFYFATSVDTNDTDEINSFFDEAVQNKCEGLMIKTLDTEATYEISRRSHS 460
Query: 103 WLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRV 161
WLK+K +Y+ G LD++++G Y G G+R G +L+ P + Y S C++
Sbjct: 461 WLKMKKDYVDGVGDTLDLVVMGAYSGVGKRTGVYGGYLLG-CYNPTTEEYE----SVCKI 515
Query: 162 GTGLSDEELDAVVTKLK-------PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEK 214
GTG +DE+L L+ P + ++++ + +F + D+ I SP
Sbjct: 516 GTGFTDEDLAEQYKILQDKKIDKSPSYYQFDHTLKPDDTFSPYLVFEVKCADITI-SPRH 574
Query: 215 SIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
+T D + I SLRFPR R+R DK D + +E+
Sbjct: 575 KAASGLTDDGKGI---------SLRFPRFLRIRDDKNSDDATSSEQVLEM 615
>gi|345107342|ref|YP_004821507.1| ATP-dependent DNA ligase [Yoka poxvirus]
gi|344267416|gb|AEN03743.1| ATP-dependent DNA ligase [Yoka poxvirus]
Length = 551
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 104/206 (50%), Gaps = 15/206 (7%)
Query: 63 VAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDV 119
V ++++ + + EG+V+KD+ S + PG R KWLK+K +Y+ G+ +D+
Sbjct: 357 VVKEINQLSNILDNVLSQKLEGLVVKDINSSYLPGKR--KWLKIKKDYLNNGALADSIDL 414
Query: 120 LIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 179
+++G YYG G +GG +A FL+ + + + ++ C +G DE L+ + T L
Sbjct: 415 VVLGAYYGKGSKGGIMAVFLMGCYD---DNDCKWKTVTKC---SGHDDETLNYLQTHLN- 467
Query: 180 YFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLR 239
+ + PK+ P + N PD I P++S + I T +A S+R
Sbjct: 468 MIKINKDPKKIPD---WLIVNKIYYPDFVINDPKESQVWEIIGSDFTSSKFHTAAGISIR 524
Query: 240 FPRIDRVRYDKPWHDCLDVQSFVELV 265
FPR R+R+DK W ++ ++++
Sbjct: 525 FPRFSRIRHDKDWKTSTYLKDIIKII 550
>gi|341899398|gb|EGT55333.1| hypothetical protein CAEBREN_01380 [Caenorhabditis brenneri]
Length = 777
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 104/219 (47%), Gaps = 35/219 (15%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLKDLGSK--WEPGDRSGKWLKLKPEYIRA-GSDL 117
S+ ++ DE+ FF E ++N+ EG+++K L ++ +E RS WLK+K +Y+ G L
Sbjct: 419 SVDTNDTDEINSFFDEAVQNKCEGLMIKTLDTEATYEISRRSKSWLKMKKDYVDGVGDTL 478
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D++++G Y G+G+R G +L+ P+ + Y S C++GTG SD++L L
Sbjct: 479 DLVVMGAYIGNGKRTGVYGGYLLG-CYNPSTEEYE----SVCKIGTGFSDDDLAEQFKLL 533
Query: 178 KPYFRKYEYPKRAPPSFYQVTNNSKE----RPDVWIE--------SPEKSIILSITSDIR 225
+ E PS+YQ K P + E SP +T D R
Sbjct: 534 Q------EEKIDKVPSYYQFDPTLKPDDIFSPHLVFEVKCADITISPRHKAASGLTEDGR 587
Query: 226 TIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
I SLRFPR R+R DK D + +E+
Sbjct: 588 GI---------SLRFPRFLRIRDDKNPEDATSSEQVLEM 617
>gi|326469593|gb|EGD93602.1| DNA ligase [Trichophyton tonsurans CBS 112818]
Length = 859
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 108/235 (45%), Gaps = 29/235 (12%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLI 121
+++E++ E+++ EG+++K L S +EP RS WLK+K +Y+ G LD+++
Sbjct: 635 DLEEIQTMLDESVKASCEGLMVKMLDTEDSGYEPSKRSRNWLKVKKDYLAGIGDSLDLVV 694
Query: 122 IGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYF 181
+G Y+G G+R FL+A A P Y + C +GTG S+ L+ + L P
Sbjct: 695 LGAYFGRGKRTSVYGAFLLA-AYNPKTQNYE----TICNIGTGFSEALLEELHETLSPLV 749
Query: 182 RKYEYPKRAPPSFYQVTNNSKERPDVWIESPE-----KSIILSITSDIRTIRSEVFSAP- 235
P FY + K++PDVW E P+ K+ L+++ T EV +
Sbjct: 750 ID------KPKPFYSHSTVPKDQPDVWFE-PKFVWEVKAADLTLSPRYSTASDEVMGSTG 802
Query: 236 ------YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 284
SLRFPR + R DK ++ E+ K G + DD
Sbjct: 803 GSTAKGISLRFPRYIKARDDKKPDQATTTKAVAEMYRKQESVAMD-KTKGAVDDD 856
>gi|327311493|ref|YP_004338390.1| ATP-dependent DNA ligase [Thermoproteus uzoniensis 768-20]
gi|326947972|gb|AEA13078.1| ATP-dependent DNA ligase [Thermoproteus uzoniensis 768-20]
Length = 594
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 106/218 (48%), Gaps = 29/218 (13%)
Query: 60 WSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LD 118
W+L + ++V+ FF E I EG+V K S +E G R W+K K +Y SD +D
Sbjct: 382 WALF-DDEEKVDVFFHEAISMGMEGLVCKSPTSVYEMGARGWNWIKYKRDYRSEMSDTVD 440
Query: 119 VLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLK 178
++++G +YG G+R G FL A A P DT F + C+VG+G +D +L + L+
Sbjct: 441 LVVVGAFYGRGKRAGLYGAFLTA-AYDPKTDT----FYTVCKVGSGFTDADLKKMYQMLE 495
Query: 179 PYFRKYEYPKRAPPSFYQVTNNSKERPDVW------IESPEKSIILSI--TSDIRTIRSE 230
PY + +P+ +S+ PDVW +E I LS T + +R +
Sbjct: 496 PYKIDHRHPR----------VSSRMEPDVWFTPGVVLEIIGAEITLSPLHTCCLGAVRPD 545
Query: 231 VFSAPYSLRFPRI-DRVRYDKPWHDCLDVQSFVELVHS 267
V A +RFPR R R DK + V +E+ S
Sbjct: 546 VGLA---IRFPRFTGRYRTDKSPEEATTVDELLEMYKS 580
>gi|406605056|emb|CCH43527.1| DNA ligase IV [Wickerhamomyces ciferrii]
Length = 950
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 96/404 (23%), Positives = 172/404 (42%), Gaps = 49/404 (12%)
Query: 45 LRSQIMAADQTGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWL 104
LR + + Q E + A D+++ +E EG+VLK + S ++ R+ +W+
Sbjct: 430 LRKILNESPQFVEIIEAKRASTEDDIKLALTNAVEKGSEGVVLKQIKSHYQIDKRTDQWV 489
Query: 105 KLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVAL--AERPAPDTYPRRFISFCRV 161
K+KPEY+ G ++D+++I GR + F L ++ D +F SFCRV
Sbjct: 490 KIKPEYLEEFGENVDLVVI------GREKSKKDMFFCGLRVSDDDLDDDLKCKFWSFCRV 543
Query: 162 GTGLSDEELDAV----------VTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIES 211
G E + + K KP E+ KR PP + + IE
Sbjct: 544 ANGFDKNEYREIERITQGKWKDINKEKPPASLIEFGKRVPPEWID------PKDSFVIEV 597
Query: 212 PEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGT 271
+SI SI+ + +T S Y+ ++R DK W + + + S T
Sbjct: 598 KARSIDRSISKNYKT--STTLYNAYN------RKIRDDKDWRTASTLDDYKHIKDSR--T 647
Query: 272 TQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFVN 331
+ K E + K K+ R E ++ I + D + + + IF + F ++
Sbjct: 648 SVKSTEQKLVS--KKKRLIRKRHRESQDEEI----WNDDDFNKMSKSSEIFEGLTFMVLS 701
Query: 332 ----VPPAYSLDSLHKMVVENGGTFSMN---LNNSVTHCVAADNKGLKYEAAKRRG-DVI 383
+LD L ++ NGG + N + + + + +D ++ A K++G D++
Sbjct: 702 DVFYKNNRITLDELSSIIHVNGGKVTKNETTIQDWSSLRIISDKFTIQASALKKKGFDIL 761
Query: 384 HYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEVDEFSDLY 427
SW+ C K+ +Q++PKY ++ + K + VD F D Y
Sbjct: 762 KSSWLFKCVEIKQNIQVEPKYCFKVNGELELKSNKRVDSFGDSY 805
>gi|156523208|ref|NP_001096018.1| DNA ligase 1 [Bos taurus]
gi|134025125|gb|AAI34519.1| LIG1 protein [Bos taurus]
gi|296477394|tpg|DAA19509.1| TPA: DNA ligase (ATP) 1 [Bos taurus]
Length = 916
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 102/202 (50%), Gaps = 29/202 (14%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEYIRA-GSDL 117
SL + +++ +F ++++++ EG+++K D+ + +E RS WLKLK +Y+ G L
Sbjct: 695 SLDTKDTEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLEGVGDTL 754
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D+++IG Y G G+R G FL+A + D F + C++GTG SDEEL+ +L
Sbjct: 755 DLVVIGAYLGKGKRAGRYGGFLLA-----SYDEESEEFQAICKLGTGFSDEELEEHHQRL 809
Query: 178 K----PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRS 229
+ P R Y V + PD W++ + K LS++ R
Sbjct: 810 QALVLPTPRSY------------VRADGAVAPDHWLDPSDVWEVKCADLSLSPIYPAARG 857
Query: 230 EVFSAP-YSLRFPRIDRVRYDK 250
V S SLRFPR RVR DK
Sbjct: 858 LVDSEKGISLRFPRFIRVREDK 879
>gi|396462464|ref|XP_003835843.1| hypothetical protein LEMA_P051840.1 [Leptosphaeria maculans JN3]
gi|312212395|emb|CBX92478.1| hypothetical protein LEMA_P051840.1 [Leptosphaeria maculans JN3]
Length = 896
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 108/211 (51%), Gaps = 23/211 (10%)
Query: 65 HNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVL 120
+ +DE++ ++++++ EG+++K L S +EP RS WLK+K +Y+ G LD++
Sbjct: 677 NELDEIQILLEDSVKSGCEGLMVKMLDGPESYYEPSKRSQNWLKVKKDYLAGVGDSLDLV 736
Query: 121 IIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPY 180
++G YYG G+R FL+A P T ++ + C +GTG S+ L+++ L
Sbjct: 737 VLGAYYGRGKRTSWYGAFLLACYN---PST--EKYETVCNIGTGFSEAILESLHKTLSAI 791
Query: 181 FRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE-----KSIILSITSDIRTIRSEVFSA- 234
+ PK FY ++ +K++PDVW E P K+ L+++ R EV
Sbjct: 792 V--IDRPK----PFYTHSSGNKDQPDVWFE-PRYVWEVKTADLTLSPRYRAAADEVAGGG 844
Query: 235 -PYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
SLRFPR + R DK + + E+
Sbjct: 845 KGISLRFPRFIKEREDKKPAEASTARMIAEM 875
>gi|375083079|ref|ZP_09730114.1| ATP-dependent DNA ligase [Thermococcus litoralis DSM 5473]
gi|374742236|gb|EHR78639.1| ATP-dependent DNA ligase [Thermococcus litoralis DSM 5473]
Length = 560
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 101/204 (49%), Gaps = 31/204 (15%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVL 120
+L+ N +E E+F+ ++ EG++ K L S +E G+R KWLK+KP +LD++
Sbjct: 377 NLITKNPEEAEEFYHRALDLGHEGLMAKRLDSVYELGNRGKKWLKIKPTM----ENLDLV 432
Query: 121 IIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPY 180
IIG +G GRR G ++ FL+ A D F+ +VG+G +DE+L LKP
Sbjct: 433 IIGAEWGEGRRSGVLSSFLLG-----AYDPIRGDFVPVGKVGSGFTDEDLIEFTKMLKPL 487
Query: 181 FRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRF 240
+K E+ K F ++ P + IE + I +S + + ++LRF
Sbjct: 488 IKK-EHGK-----FVEI------EPKIVIEVAYQEI----------QKSPKYESGFALRF 525
Query: 241 PRIDRVRYDKPWHDCLDVQSFVEL 264
PR +R DK D +Q EL
Sbjct: 526 PRYVALREDKGPEDADTLQRIAEL 549
>gi|342318887|gb|EGU10843.1| DNA ligase [Rhodotorula glutinis ATCC 204091]
Length = 872
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 102/199 (51%), Gaps = 29/199 (14%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDL---GSKWEPGDRSGKWLKLKPEYIRA-GSDLDV 119
A V+E++ F ++I++ EG+++K L G+ +EP RS WLKLK +Y++ G D+
Sbjct: 652 ASTVEEIQTFLDQSIKDGCEGLMVKMLEGEGASYEPSRRSIHWLKLKKDYLQGVGDSFDL 711
Query: 120 LIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 179
++IGG YG G+R F +A D + C++GTG SDE L LKP
Sbjct: 712 VVIGGDYGKGKRTNVYGAFHLACF-----DAESGTYQMICKIGTGFSDEALKQHHETLKP 766
Query: 180 YFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP---- 235
E ++ ++Y + + + PDV+ E K + + +D+ S ++SA
Sbjct: 767 ----LELAQKK--AYYDI--GTAKGPDVYFEP--KVVWEVLAADLSL--SPIYSAAKGLC 814
Query: 236 ----YSLRFPRIDRVRYDK 250
SLRFPR RVR DK
Sbjct: 815 GDRGISLRFPRFIRVRDDK 833
>gi|307212762|gb|EFN88433.1| DNA ligase 1 [Harpegnathos saltator]
Length = 826
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 107/240 (44%), Gaps = 37/240 (15%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRA-GSDL 117
SL ++E++ F E+++ EG+++K L + +E RS WLKLK +Y+ G L
Sbjct: 606 SLDTSMIEEMQIFLDESVKGNCEGLMVKTLEEEATYEIAKRSRNWLKLKKDYLDGVGDTL 665
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEEL------- 170
DV++IGGY G G+R G FL+A D + S C++GTG +E+L
Sbjct: 666 DVVVIGGYIGKGKRTGTYGGFLLACY-----DQENEEYQSVCKIGTGFKEEDLENHTKFF 720
Query: 171 -DAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIR 225
D V+++ K Y+R + PD W E + K LS++ R
Sbjct: 721 KDHVISQAKSYYR----------------FDGSHEPDHWFEPIQVWEIKCADLSLSPVHR 764
Query: 226 TIRSEV-FSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 284
V SLRFPR R+R DK + Q ++ ++ K ++D
Sbjct: 765 AAIGIVDPEKGISLRFPRFIRIREDKNCEEATLAQQVADMYNNQEQIKNKTSASKATEED 824
>gi|406696184|gb|EKC99479.1| DNA ligase [Trichosporon asahii var. asahii CBS 8904]
Length = 727
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 113/237 (47%), Gaps = 44/237 (18%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGS---KWEPGDRSGKWLKLKPEYIRA-GSDLDV 119
+E++ F +E++++ EG+++K L S +EP RS WLK +Y+ G LD+
Sbjct: 517 GSTTEEIQTFLEESVKDGCEGLMVKMLASDASTYEPSRRSINWLK--KDYLSGVGDSLDL 574
Query: 120 LIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 179
+++G YYG G+R FL+A + PD+ + + C++GTG S+E L +L P
Sbjct: 575 VVVGAYYGKGKRTNWYGAFLLACYD---PDS--ENYQTICKIGTGFSEEILKQFYDELHP 629
Query: 180 YFRKYEYPKRAPPSFYQVTNNSK-------ERPDVWIESPEKSIILSITSDIRTIRSEVF 232
++T ++ +PDVW E K + +T+D+ S V+
Sbjct: 630 ---------------LELTGGARGNIEVGGAKPDVWFEP--KVVWEVLTADLSL--SPVY 670
Query: 233 SAPY-----SLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 284
+A + SLRFPR +VR DK + + + S T GK+ G DD
Sbjct: 671 TAAHGLRGISLRFPRFIKVRDDKGPEEATTAEQVADFYQSQ--ATAAGKKGGAAVDD 725
>gi|18978007|ref|NP_579364.1| ATP-dependent DNA ligase [Pyrococcus furiosus DSM 3638]
gi|397652716|ref|YP_006493297.1| ATP-dependent DNA ligase [Pyrococcus furiosus COM1]
gi|6225279|sp|P56709.1|DNLI_PYRFU RecName: Full=DNA ligase; AltName: Full=Pfu DNA ligase; AltName:
Full=Polydeoxyribonucleotide synthase [ATP]
gi|18893788|gb|AAL81759.1| DNA ligase (lig) [Pyrococcus furiosus DSM 3638]
gi|393190307|gb|AFN05005.1| ATP-dependent DNA ligase [Pyrococcus furiosus COM1]
Length = 561
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 98/204 (48%), Gaps = 31/204 (15%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVL 120
+L+ V+E E F+K +E EG++ K L + +EPG+R KWLK+KP +LD++
Sbjct: 376 NLITKKVEEAEAFYKRALEMGHEGLMAKRLDAVYEPGNRGKKWLKIKPTM----ENLDLV 431
Query: 121 IIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPY 180
IIG +G GRR F++ A D F+ +VG+G +D++L LKP
Sbjct: 432 IIGAEWGEGRRAHLFGSFILG-----AYDPETGEFLEVGKVGSGFTDDDLVEFTKMLKPL 486
Query: 181 FRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRF 240
K E + VW++ K +I +I+ +S + + ++LRF
Sbjct: 487 IIKEEGKR------------------VWLQP--KVVIEVTYQEIQ--KSPKYRSGFALRF 524
Query: 241 PRIDRVRYDKPWHDCLDVQSFVEL 264
PR +R DK D ++ +L
Sbjct: 525 PRFVALRDDKGPEDADTIERIAQL 548
>gi|156083667|ref|XP_001609317.1| DNA ligase I [Babesia bovis T2Bo]
gi|154796568|gb|EDO05749.1| DNA ligase I [Babesia bovis]
Length = 773
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 110/218 (50%), Gaps = 25/218 (11%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLGSK--WEPGDRSGKWLKLKPEYIRA-GSDLDVLII 122
++++++ F ++ + + EG+++K L S+ +EP RS WLK K +YI G +D++ I
Sbjct: 570 SLEDIDDFLRQAVSDSCEGLMIKSLDSESTYEPQKRSNNWLKFKKDYIDGMGDSVDLVPI 629
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
+ G G+R +L+A+ + P + Y S C+ GTG SD+ L + L+
Sbjct: 630 AAFLGKGKRTSVYGSYLLAVYD-PIHEVYQ----SVCKTGTGFSDQTLKDLFDSLQ---- 680
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRSEVFSA--PY 236
E+ + PS Y V++ K PDVW + + K+ LSI S I T ++ ++
Sbjct: 681 --EHTVQNKPSIYVVSD--KFEPDVWFQPAKVWECKAADLSI-SPIHTASQDMTASGKGI 735
Query: 237 SLRFPRIDRVRYDKPWHDCLDVQSFVELVHSS--NGTT 272
LRFPR R+R DK D ++ S NG +
Sbjct: 736 GLRFPRFVRLREDKKPMDATTSHQIFDMYESQFKNGAS 773
>gi|440906381|gb|ELR56651.1| DNA ligase 1, partial [Bos grunniens mutus]
Length = 917
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 102/202 (50%), Gaps = 29/202 (14%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEYIRA-GSDL 117
SL + +++ +F ++++++ EG+++K D+ + +E RS WLKLK +Y+ G L
Sbjct: 696 SLDTKDSEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLEGVGDTL 755
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D+++IG Y G G+R G FL+A + D F + C++GTG SDEEL+ +L
Sbjct: 756 DLVVIGAYLGKGKRAGRYGGFLLA-----SYDEESEEFQAICKLGTGFSDEELEEHHQRL 810
Query: 178 K----PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRS 229
+ P R Y V + PD W++ + K LS++ R
Sbjct: 811 QALVLPTPRSY------------VRADGAVAPDHWLDPSDVWEVKCADLSLSPIYPAARG 858
Query: 230 EVFSAP-YSLRFPRIDRVRYDK 250
V S SLRFPR RVR DK
Sbjct: 859 LVDSEKGISLRFPRFIRVREDK 880
>gi|395528668|ref|XP_003766449.1| PREDICTED: DNA ligase 1, partial [Sarcophilus harrisii]
Length = 709
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 99/202 (49%), Gaps = 29/202 (14%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYIRA-GSDL 117
SL + +++ F ++++++ EG+++K L + +E RS WLKLK +Y+ G L
Sbjct: 487 SLDTEDTEQIADFLEQSVKDSCEGLMVKTLETNATYEIAKRSHNWLKLKKDYLEGVGDTL 546
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D+++IG Y G G+R G FL+A A D F + C++GTG SDEEL+ L
Sbjct: 547 DLVVIGAYLGRGKRAGRYGGFLLA-----AFDEDSEEFQAICKLGTGFSDEELEEHYQNL 601
Query: 178 K----PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRS 229
+ P R Y + A P PD W+E K LS++ R
Sbjct: 602 QALVIPAPRSYVRAEGAVP------------PDHWLEPTTVWEVKCADLSVSPIYSAARG 649
Query: 230 EVFS-APYSLRFPRIDRVRYDK 250
V S SLRFPR +VR DK
Sbjct: 650 LVESDKGISLRFPRFVQVRKDK 671
>gi|390479226|ref|XP_002762363.2| PREDICTED: LOW QUALITY PROTEIN: DNA ligase 1-like [Callithrix
jacchus]
Length = 1009
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 109/237 (45%), Gaps = 38/237 (16%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEYIRA-GSDL 117
SL +V+++ +F ++++++ EG+++K D+ + +E RS WLK+K +Y+ G L
Sbjct: 787 SLDTKDVEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKMKKDYLSGVGDTL 846
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDA----- 172
D+++IG Y G G+R G FL+A D + C++GTG SDEEL+A
Sbjct: 847 DLVVIGAYLGRGKRAGRYGGFLLACY-----DEDSEELQAICKLGTGFSDEELEAHHQSL 901
Query: 173 ---VVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIR 225
V+ +PY R + PD W++ K LS++
Sbjct: 902 QALVLPSPRPYVR----------------IDDAVTPDHWLDPSAVWEVKCADLSLSPIYP 945
Query: 226 TIRSEVFS-APYSLRFPRIDRVRYDK-PWHDCLDVQSFVELVHSSNGTTQKGKEYGG 280
R V S SLRFPR RVR DK P Q S Q+G+E G
Sbjct: 946 AARGLVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQSQIQNQQGEEDTG 1002
>gi|358336160|dbj|GAA54723.1| DNA ligase 3 [Clonorchis sinensis]
Length = 747
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 99/218 (45%), Gaps = 25/218 (11%)
Query: 63 VAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDV 119
V ++ + EG+VLK S +EPG R WLK+K +Y+ GS +D+
Sbjct: 395 VIQDIPSLNILMARVFSENLEGLVLKPSHSTYEPGKR--HWLKIKRDYLAEGSMADSVDL 452
Query: 120 LIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 179
+++G YYG+G + G ++ FL+ A D ++F + + G G SDE L + KLK
Sbjct: 453 IVLGAYYGTGNKAGLMSVFLMG-----AYDPASKQFTTVTKCGNGFSDEMLQMLQKKLK- 506
Query: 180 YFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYS-- 237
+ PS+ V+ + PD +E P+ + + IT R+ +A S
Sbjct: 507 ---MKRITQSDVPSWLNVSKSLI--PDFVVEDPKSAPVWEITG-AEFSRASTHTAGLSSG 560
Query: 238 ------LRFPRIDRVRYDKPWHDCLDVQSFVELVHSSN 269
+RFPR + R DK W +V LV S
Sbjct: 561 EAQGISIRFPRFTKARPDKTWQQATNVSELQRLVAESG 598
>gi|14591397|ref|NP_143476.1| ATP-dependent DNA ligase [Pyrococcus horikoshii OT3]
gi|6225280|sp|O59288.1|DNLI_PYRHO RecName: Full=Probable thermostable DNA ligase; AltName:
Full=Polydeoxyribonucleotide synthase [ATP]
gi|3258051|dbj|BAA30734.1| 559aa long hypothetical DNA ligase [Pyrococcus horikoshii OT3]
Length = 559
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 97/204 (47%), Gaps = 31/204 (15%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVL 120
+L+ N +E EKF+K +E EG++ K L + +EPG+R KWLK+KP +LD++
Sbjct: 376 NLITKNAEEAEKFYKRALEMGHEGLMAKRLDAVYEPGNRGKKWLKIKPTM----ENLDLV 431
Query: 121 IIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPY 180
IIG +G GRR F++ A D F+ +VG+G +D++L LKP
Sbjct: 432 IIGAEWGEGRRAHLFGSFILG-----AYDPETGEFLEVGKVGSGFTDDDLVEFTKMLKPL 486
Query: 181 FRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRF 240
K E KR +P + IE + I +S + + ++LRF
Sbjct: 487 IVKEE-GKRVVI-----------QPKIVIEVTYQEIQ----------KSPKYRSGFALRF 524
Query: 241 PRIDRVRYDKPWHDCLDVQSFVEL 264
PR +R DK D ++ +L
Sbjct: 525 PRYVALRDDKGPEDADTIERIAQL 548
>gi|444730652|gb|ELW71027.1| DNA ligase 1 [Tupaia chinensis]
Length = 960
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 101/198 (51%), Gaps = 21/198 (10%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEYIRA-GSDL 117
SL + +++++F ++++++ EG+++K D+ + +E RS WLKLK +Y+ G L
Sbjct: 739 SLDTKDTEQIDEFLEQSVKDSCEGLMVKTLDVNATYEIAKRSHNWLKLKKDYLDGVGDTL 798
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D+++IG Y G G+R G+ FL+A + D + C++GTG D EL+ L
Sbjct: 799 DLVVIGAYLGRGKRAGQYGGFLLA-----SYDADTEELQAICKLGTGFCDRELEEQHENL 853
Query: 178 KPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIES----PEKSIILSITSDIRTIRSEVFS 233
+ P S+ +V + PD W+E K LS++ R V S
Sbjct: 854 QDLVLP------TPRSYVRVGGAAA--PDHWLEPRIVWEVKCADLSLSPIYPAARGLVDS 905
Query: 234 AP-YSLRFPRIDRVRYDK 250
SLRFPR RVRYDK
Sbjct: 906 EKGISLRFPRFIRVRYDK 923
>gi|147901564|ref|NP_001081653.1| DNA ligase 1 [Xenopus laevis]
gi|1706480|sp|P51892.1|DNLI1_XENLA RecName: Full=DNA ligase 1; AltName: Full=DNA ligase I; AltName:
Full=Polydeoxyribonucleotide synthase [ATP] 1
gi|1161304|gb|AAB37754.1| ligase I [Xenopus laevis]
Length = 1070
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 99/202 (49%), Gaps = 39/202 (19%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLII 122
N DE+ +F ++I++ EG+++K L + +E RS WLKLK +Y+ G LD+++I
Sbjct: 856 NTDEISEFLDQSIKDSCEGLMVKTLEQDATYEIAKRSHNWLKLKKDYLEGVGDTLDLVVI 915
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
G Y G G+R G FL+A + D + + C++GTG +D++L+ LK +
Sbjct: 916 GAYLGKGKRTGIYGGFLLA-----SYDEESEEYQTICKIGTGFTDDDLEKHYNFLKDHV- 969
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIE--------------SPEKSIILSITSDIRTIR 228
E P+ S+Y+ +S PD W + SP L + D + I
Sbjct: 970 -IENPR----SYYRW--DSATEPDHWFDPVQVWEVKCADLSISPVHKAALGLVEDQKGI- 1021
Query: 229 SEVFSAPYSLRFPRIDRVRYDK 250
SLRFPR R+R DK
Sbjct: 1022 --------SLRFPRFLRIRDDK 1035
>gi|367050816|ref|XP_003655787.1| hypothetical protein THITE_43396 [Thielavia terrestris NRRL 8126]
gi|347003051|gb|AEO69451.1| hypothetical protein THITE_43396 [Thielavia terrestris NRRL 8126]
Length = 749
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 105/222 (47%), Gaps = 23/222 (10%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDV 119
+DE++ F E+++ EG+++K L S +EP RS WLK+K +Y+ G LD+
Sbjct: 527 GQELDEIQSFLDESVKASCEGLMVKMLDGEESGYEPSKRSRNWLKIKKDYLSGVGDSLDL 586
Query: 120 LIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 179
+++G YYG G+R FL+A P DTY + C +GTG S +AV+ +L
Sbjct: 587 VVLGAYYGKGKRTSVYGAFLLA-CYNPGTDTYE----TVCNIGTGFS----EAVLEELHD 637
Query: 180 YFRKYEYPKRAPPSFYQVTNNSKERPDVWIES----PEKSIILSITSDIRTIRSEVFSAP 235
+ + P FY ++ + +PDVW E ++ L+++ + E
Sbjct: 638 SLSQIVIDR--PKPFYSHSSVGQHQPDVWFEPRYVWEVRTADLTLSPRYKAGMKEGVDPS 695
Query: 236 ----YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQ 273
SLRFPR +VR DK + + E+ T+
Sbjct: 696 GEKGISLRFPRFIKVRDDKKPDEATTSRQVAEMYRKQESVTK 737
>gi|410221310|gb|JAA07874.1| ligase I, DNA, ATP-dependent [Pan troglodytes]
gi|410251416|gb|JAA13675.1| ligase I, DNA, ATP-dependent [Pan troglodytes]
gi|410288274|gb|JAA22737.1| ligase I, DNA, ATP-dependent [Pan troglodytes]
gi|410353221|gb|JAA43214.1| ligase I, DNA, ATP-dependent [Pan troglodytes]
Length = 919
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 111/237 (46%), Gaps = 30/237 (12%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEYIRA-GSDL 117
SL +V+++ +F ++++++ EG+++K D+ + +E RS WLKLK +Y+ G L
Sbjct: 698 SLDTKDVEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDGVGDTL 757
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D+++IG Y G G+R G FL+A + D + C++GTG SDEELD L
Sbjct: 758 DLVVIGAYLGRGKRAGRYGGFLLA-----SYDEDSEELQAICKLGTGFSDEELDEHHQSL 812
Query: 178 K----PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRS 229
K P R Y V + PD W++ K LS++ R
Sbjct: 813 KALVLPSPRPY------------VRIDGAVIPDHWLDPSAVWEVKCADLSLSPIYPAARG 860
Query: 230 EVFS-APYSLRFPRIDRVRYDK-PWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 284
V S SLRFPR RVR DK P Q S Q+G++ G +D
Sbjct: 861 LVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQSQIQNQQGEDSGSDPED 917
>gi|119872622|ref|YP_930629.1| ATP-dependent DNA ligase [Pyrobaculum islandicum DSM 4184]
gi|166215377|sp|A1RTK4.1|DNLI_PYRIL RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|119674030|gb|ABL88286.1| DNA ligase I, ATP-dependent Dnl1 [Pyrobaculum islandicum DSM 4184]
Length = 584
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 101/219 (46%), Gaps = 24/219 (10%)
Query: 63 VAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLI 121
V + +E++ FF E + EG+V K S +E G R W+K K +Y D +D+++
Sbjct: 380 VFDDAEEIDVFFHEAVSLGMEGLVCKSPTSVYEMGARGWNWIKYKRDYKSEMIDTVDLVV 439
Query: 122 IGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYF 181
+G +YG G+R G FL+A A PA D F + C+VG+G +D +L + L+PY
Sbjct: 440 VGAFYGRGKRAGLYGAFLLA-AYDPATDM----FYTVCKVGSGFTDADLKKMYEMLQPYK 494
Query: 182 RKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSI-ILSITSDIRTIRSEVFSA-----P 235
+ +P+ SK PDVW +P+ I ++ + + + A
Sbjct: 495 IPHRHPRVV----------SKMEPDVWF-TPQVVIEVIGAEITLSPLHTCCLGAVKPGVG 543
Query: 236 YSLRFPRI-DRVRYDKPWHDCLDVQSFVELVHSSNGTTQ 273
++RFPR R R DK V +EL Q
Sbjct: 544 LAIRFPRFTGRYRTDKSPEQATTVSEMIELYKRQKKVAQ 582
>gi|341899425|gb|EGT55360.1| hypothetical protein CAEBREN_25255 [Caenorhabditis brenneri]
Length = 777
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 104/219 (47%), Gaps = 35/219 (15%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLKDLGSK--WEPGDRSGKWLKLKPEYIRA-GSDL 117
S+ ++ DE+ FF E ++N+ EG+++K L ++ +E RS WLK+K +Y+ G L
Sbjct: 419 SVDTNDTDEINSFFDEAVQNKCEGLMIKTLDTEATYEISRRSKSWLKMKKDYVDGVGDTL 478
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D++++G Y G+G+R G +L+ P+ + Y S C++GTG SD++L L
Sbjct: 479 DLVVMGAYIGNGKRTGVYGGYLLG-CYNPSTEEYE----SVCKIGTGFSDDDLAEQFKLL 533
Query: 178 KPYFRKYEYPKRAPPSFYQVTNNSKE----RPDVWIE--------SPEKSIILSITSDIR 225
+ E PS+YQ K P + E SP +T D +
Sbjct: 534 Q------EEKIDKAPSYYQFDPTLKPDDIFSPHLVFEVKCADITISPRHKAASGLTEDGK 587
Query: 226 TIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
I SLRFPR R+R DK D + +E+
Sbjct: 588 GI---------SLRFPRFLRIRDDKNPEDATSSEQVLEM 617
>gi|112490160|pdb|2CFM|A Chain A, Atp-Dependent Dna Ligase From Pyrococcus Furiosus
Length = 561
Score = 85.9 bits (211), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 103/217 (47%), Gaps = 31/217 (14%)
Query: 48 QIMAADQTGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLK 107
+I+ ++ + +L+ V+E E F+K +E EG+ K L + +EPG+R KWLK+K
Sbjct: 363 EIIKQNEKIKVAENLITKKVEEAEAFYKRALEXGHEGLXAKRLDAVYEPGNRGKKWLKIK 422
Query: 108 PEYIRAGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSD 167
P +LD++IIG +G GRR F++ A D F+ +VG+G +D
Sbjct: 423 P----TXENLDLVIIGAEWGEGRRAHLFGSFILG-----AYDPETGEFLEVGKVGSGFTD 473
Query: 168 EELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTI 227
++L LKP K E + VW++ K +I +I+
Sbjct: 474 DDLVEFTKXLKPLIIKEEGKR------------------VWLQP--KVVIEVTYQEIQ-- 511
Query: 228 RSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
+S + + ++LRFPR +R DK D ++ +L
Sbjct: 512 KSPKYRSGFALRFPRFVALRDDKGPEDADTIERIAQL 548
>gi|260951201|ref|XP_002619897.1| hypothetical protein CLUG_01056 [Clavispora lusitaniae ATCC 42720]
gi|238847469|gb|EEQ36933.1| hypothetical protein CLUG_01056 [Clavispora lusitaniae ATCC 42720]
Length = 961
Score = 85.9 bits (211), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 93/390 (23%), Positives = 162/390 (41%), Gaps = 70/390 (17%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLII 122
A D++++ + + R+EGI++K SK+ R W+K+KPEY+ G +LD++++
Sbjct: 460 ASTPDDIKRNMQRIVSERNEGIMVKSFLSKYRVHSRDSTWIKVKPEYLENFGENLDLVVV 519
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
G+ G ++ L + F SFC V G S + +KL ++
Sbjct: 520 ------GKIGRIKTSYICGLRDEEEEGC----FKSFCMVANGFSKAVYRQIESKLYNFWV 569
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEV-FSAPYSLRFP 241
Y+ +R PP + +PD WI +P SI+L I + + +E ++A +L
Sbjct: 570 NYK--ERKPPE--DLVKFGTRKPDFWI-NPANSIVLEIKARSIEVTAETPYAAGSTLHNL 624
Query: 242 RIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSS---RKGEKK 298
VR DK + +C+ +Q + EL + K + + + + F +S R KK
Sbjct: 625 WCRAVREDKGYEECITLQQYQELKMRYSTDVFKQQT---VNRARKRGFENSIYDRFATKK 681
Query: 299 NVSIVPS-------HF-LQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGG 350
IVP HF + TD D++ I + + + + V E GG
Sbjct: 682 RQRIVPKSDVFQGLHFVVATDARDLQSHELI---------------TKEEIERRVKEYGG 726
Query: 351 TFSMN-------------LNNSVTHCVAADNKGLKYEAAKRRGDVIHYSWVLDCCSQKKL 397
+ ++ L VT ++ K D+I WV DC +
Sbjct: 727 SILLHPKQENIQARNIIILGQYVTPRISM--------WVKEGFDIIRPQWVFDCIRYHTI 778
Query: 398 LQLQPKYYLHLSDSSKKKLQEEVDEFSDLY 427
L ++P+ H+ S KL+ E +D Y
Sbjct: 779 LGIEPQ---HIEQSGNAKLRRSASETTDKY 805
>gi|118379613|ref|XP_001022972.1| DNA ligase I [Tetrahymena thermophila]
gi|89304739|gb|EAS02727.1| DNA ligase I [Tetrahymena thermophila SB210]
Length = 816
Score = 85.9 bits (211), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 114/211 (54%), Gaps = 35/211 (16%)
Query: 56 GEPCWS--LVAHNVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYI 111
GE C++ + +V+++++F +++++ EG+++K L S +EP RS KWLKLK +Y+
Sbjct: 593 GEFCFAEHINTEDVEQIQEFLEKSVKVGCEGLMVKTLETNSTYEPAKRSFKWLKLKKDYL 652
Query: 112 RA--GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEE 169
+ G LD++ I + G+G+R G +L+A R+ + C++GTG SDE
Sbjct: 653 DSGLGDTLDLVPIAAFKGTGKRVGLYGAYLLACYNEDM-----ERYETICKIGTGFSDEI 707
Query: 170 LDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSIT-SDIRTIR 228
L+A +F+ P+ P S Y +T + K DVW + S++ I +D++
Sbjct: 708 LEACYK----FFQDKIIPQ--PQSDY-LTKDFK--ADVWFKP---SVVWEIKGADLQI-- 753
Query: 229 SEVFSAPYS---------LRFPRIDRVRYDK 250
S V++ S LRFPR+ RVR DK
Sbjct: 754 SPVYTCAISETNQEKGIGLRFPRLIRVRDDK 784
>gi|410982858|ref|XP_003997763.1| PREDICTED: LOW QUALITY PROTEIN: DNA ligase 1 [Felis catus]
Length = 903
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 99/202 (49%), Gaps = 29/202 (14%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEYIRA-GSDL 117
SL + D++ +F ++++++ EG+++K D+ + +E RS WLKLK +Y+ G L
Sbjct: 682 SLDTKDTDQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDGVGDTL 741
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D+++IG Y G G+R G FL+A A D + C++GTG SDEEL+ L
Sbjct: 742 DLVVIGAYLGRGKRAGRYGGFLLA-----AYDEESEELQAICKLGTGFSDEELEDHFQSL 796
Query: 178 K----PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRS 229
+ P R Y V + PD W++ K LS++ R
Sbjct: 797 QALVLPTPRSY------------VRADGAVAPDHWLDPSAVWEVKCADLSLSPIYPAARG 844
Query: 230 EVFSAP-YSLRFPRIDRVRYDK 250
V S SLRFPR RVR DK
Sbjct: 845 LVDSEKGISLRFPRFIRVREDK 866
>gi|340345096|ref|ZP_08668228.1| DNA ligase [Candidatus Nitrosoarchaeum koreensis MY1]
gi|339520237|gb|EGP93960.1| DNA ligase [Candidatus Nitrosoarchaeum koreensis MY1]
Length = 590
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 99/197 (50%), Gaps = 26/197 (13%)
Query: 68 DEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIGGYY 126
+++E+F + +I + EG++LK L ++ G R WLKLK EY G LD+++IG ++
Sbjct: 388 EDIEEFLENSINSGCEGVMLKMLDKPYQAGSRGSYWLKLKREYRNELGDSLDLVVIGAFF 447
Query: 127 GSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEY 186
G GRR G+ L+A + D F S C+VGTG +DE+LD + L +
Sbjct: 448 GKGRRTGKYGTLLLA-----SYDYDTDVFTSICKVGTGFTDEDLDQLYQILSNKVTIKKN 502
Query: 187 PKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDI------RTIRSEVFS-APYSLR 239
P+ +S DVW E PE +I + S+I + R+E+ +LR
Sbjct: 503 PRI----------DSDMEADVWFE-PE-LVIEVVASEITLSPIHKAARNEIRKDTGLALR 550
Query: 240 FPRI-DRVRYDKPWHDC 255
FP+ ++R +K D
Sbjct: 551 FPKFTGKIRLEKDAEDA 567
>gi|145547864|ref|XP_001459613.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124427439|emb|CAK92216.1| unnamed protein product [Paramecium tetraurelia]
Length = 680
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/235 (32%), Positives = 120/235 (51%), Gaps = 39/235 (16%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYIRAG-SD-LDV 119
+ N +E+E+F +I+ EG+++K L S++EP RS WLKLK +Y+ G SD D+
Sbjct: 464 SENFEEIEEFLLNSIKMGCEGLMIKTLEINSQYEPAKRSFNWLKLKKDYLDNGLSDTFDL 523
Query: 120 LIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 179
+ IG YG+G+R G +L+A D Y + C++GTG SDE L+ K
Sbjct: 524 VPIGACYGTGKRKGFYGSYLLACYNEDM-DQYE----TTCKIGTGFSDENLE----KFFQ 574
Query: 180 YFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITS-DIRTIRSEVFSA---- 234
+F++Y P P S Y+ + DVW SP ++ I S DI+ S ++SA
Sbjct: 575 FFQEYLIPH--PLSEYKCDGVNM---DVWF-SP--VVVWEIKSADIQI--SPIYSACSTI 624
Query: 235 ------PYSLRFPRIDRVRYDKPWHDCLDVQSFVEL-----VHSSNGTTQKGKEY 278
LRFPR+ +VR DK ++ Q ++ V +SN T ++ ++
Sbjct: 625 LQLNNKGVGLRFPRLIKVREDKKPNEATSSQFLYDVYKQQAVVASNNTFEQDDDF 679
>gi|393906949|gb|EFO21610.2| DNA ligase [Loa loa]
Length = 665
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 106/213 (49%), Gaps = 27/213 (12%)
Query: 66 NVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLII 122
+ +++ +F + I+ EG+++K D + +E RS WLKLK +Y+ G LD+ +I
Sbjct: 448 DTEQISEFLDDAIKGNCEGLMIKTLDCDATYEIAKRSRSWLKLKKDYLDTIGDTLDLTVI 507
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
G ++G+G+R G +L+A P + Y S C++GTGL+D++L + YF
Sbjct: 508 GAFFGTGKRTGVYGGYLLA-CYNPINEEYE----SICKIGTGLTDDDL----RQQHQYFE 558
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA-------- 234
+ K P Y +S +PDVW + I+ + + +I + F+A
Sbjct: 559 ELRIEKARPYYSY----DSSLKPDVWFDP---KIVWEVKAADLSISPKHFAARGIVDQEK 611
Query: 235 PYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 267
SLRFPR R+R DK + Q ++ ++
Sbjct: 612 GISLRFPRYIRMRTDKTPEEATTSQQIADMYNN 644
>gi|167522421|ref|XP_001745548.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775897|gb|EDQ89519.1| predicted protein [Monosiga brevicollis MX1]
Length = 1132
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 107/210 (50%), Gaps = 21/210 (10%)
Query: 45 LRSQIMAADQTGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWL 104
+ ++IM ++QT P ++ + + + EG+VLKD S +EP R WL
Sbjct: 581 VHNEIMYSEQTAIP-------DLPTLRALMTKVMRENLEGLVLKDRHSVYEPSKR--HWL 631
Query: 105 KLKPEYIRAGS---DLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRV 161
K+K +Y+ +G+ D+ ++G ++G+G +GG ++ +L+ + D R ++ C
Sbjct: 632 KMKKDYLESGAMADTADLALLGAWFGTGSKGGLLSVYLMGCRD----DNGVWRTVTKC-- 685
Query: 162 GTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSIT 221
G G D ++DA K+ P +K + P + ++ + S+ PD I P ++ IL I
Sbjct: 686 GNGFDDAQVDAYHRKMLPLMQKVSQDRSKVPGWLRI-DESRLVPDYIIRDPNQAPILEI- 743
Query: 222 SDIRTIRSEVFSA-PYSLRFPRIDRVRYDK 250
+ S SA S+RFPRI RVR DK
Sbjct: 744 AGAEFSESRAHSADGISIRFPRIARVRSDK 773
>gi|145552160|ref|XP_001461756.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124429592|emb|CAK94383.1| unnamed protein product [Paramecium tetraurelia]
Length = 564
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/235 (32%), Positives = 120/235 (51%), Gaps = 39/235 (16%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYIRAG-SD-LDV 119
+ N +E+E+F +I+ EG+++K L S++EP RS WLKLK +Y+ G SD D+
Sbjct: 348 SENFEEIEEFLLNSIKMGCEGLMIKTLEVNSQYEPAKRSFNWLKLKKDYLDNGLSDTFDL 407
Query: 120 LIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 179
+ IG YG+G+R G +L+A D Y + C++GTG SDE L+ K
Sbjct: 408 VPIGACYGTGKRKGFYGSYLLACYNEDM-DQYE----TTCKIGTGFSDENLE----KFFQ 458
Query: 180 YFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITS-DIRTIRSEVFSA---- 234
+F++Y P P S Y+ + DVW SP ++ I S DI+ S ++SA
Sbjct: 459 FFQEYLIPH--PLSEYKCDGVNM---DVWF-SP--VVVWEIKSADIQI--SPIYSACSTI 508
Query: 235 ------PYSLRFPRIDRVRYDKPWHDCLDVQSFVEL-----VHSSNGTTQKGKEY 278
LRFPR+ +VR DK ++ Q ++ V +SN T ++ ++
Sbjct: 509 LQLNNKGVGLRFPRLIKVREDKKPNEATSSQFLYDVYKQQAVVASNNTFEQDDDF 563
>gi|449305227|gb|EMD01234.1| hypothetical protein BAUCODRAFT_21163 [Baudoinia compniacensis UAMH
10762]
Length = 937
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 109/231 (47%), Gaps = 27/231 (11%)
Query: 67 VDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIR-AGSDLDVLII 122
++E++ +++++ EG+++K L S +EP RS WLK+K +Y+ AG LD++++
Sbjct: 718 IEEIQTLLEDSVKASCEGLMVKMLDGVESHYEPSRRSQNWLKVKKDYLSGAGDSLDLVVL 777
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
G YYG G+R F +A P + Y + C +GTG S+ L+ + L P
Sbjct: 778 GAYYGKGKRTSVYGAFHLACY-NPEKEMYE----TVCNIGTGFSEVLLNELYETLSPLVI 832
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPE-----KSIILSITSDIRTIRSEVFS---- 233
P FY + ++PDVW E P+ K+ L+++ R S S
Sbjct: 833 DR------PKPFYDHSMGKNDQPDVWFE-PQYVWEVKTADLTLSPRYRAASSGFGSDGTH 885
Query: 234 APYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 284
SLRFPR RVR DK + E+ + ++ K G+ DD
Sbjct: 886 KGVSLRFPRFIRVRDDKKPEAATSSKQVAEMYRAQETVGKEKKT--GVDDD 934
>gi|453089474|gb|EMF17514.1| ATP-dependent DNA ligase [Mycosphaerella populorum SO2202]
Length = 927
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 109/231 (47%), Gaps = 28/231 (12%)
Query: 67 VDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIR-AGSDLDVLII 122
V+E++ +++I+ EG+++K L S +EP RS WLK+K +Y+ AG LD+++I
Sbjct: 708 VEEIQTLLEDSIKASCEGLMVKMLDGVESHYEPSRRSQNWLKVKKDYLAGAGDSLDLVVI 767
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
G YYG G+R F +A + ++ + C +GTG S+ L + L P
Sbjct: 768 GAYYGKGKRTNWYGAFQLACY-----NDQKEQYETVCNIGTGFSEVLLAELYETLSPLAI 822
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPE-----KSIILSITSDIRTIRSEVFS---- 233
RA P F+ + ++PDVW E P+ K+ L+++ R SE
Sbjct: 823 -----DRAKP-FFDHSTGKNDQPDVWFE-PKYVWEVKTADLTLSPRYRAASSEFGGDGTH 875
Query: 234 APYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 284
SLRFPR RVR DK + + E+ + GK G DD
Sbjct: 876 KGVSLRFPRFIRVRDDKKPDEATSSKQVAEMYRAQESV---GKTKGPSVDD 923
>gi|196007104|ref|XP_002113418.1| hypothetical protein TRIADDRAFT_57566 [Trichoplax adhaerens]
gi|190583822|gb|EDV23892.1| hypothetical protein TRIADDRAFT_57566 [Trichoplax adhaerens]
Length = 823
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 101/205 (49%), Gaps = 16/205 (7%)
Query: 68 DEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGG 124
+E+ I EG+VLKD+ S +EPG R WLK+K +Y+ GS D++++G
Sbjct: 512 NELTGLVSRVIREGLEGLVLKDVESVYEPGKRH--WLKIKKDYLAEGSMADSADLVVLGA 569
Query: 125 YYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKY 184
YYG+G +GG ++ FL+ D R+ + + G G D+ LD + +L
Sbjct: 570 YYGTGNKGGVMSVFLMG-----TYDERSGRWRTVAKCGNGHDDKTLDKINKELSVVKISK 624
Query: 185 EYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA-PYSLRFPRI 243
++ K P + V + PD + P+ + + IT +S V +A S+RFPR+
Sbjct: 625 DFSK--VPGWLNV--HRSLVPDFIVTDPKTAPVWEITG-AEFSQSTVHTADGISIRFPRV 679
Query: 244 DRVRYDKPWHDCLDVQSFVELVHSS 268
R+R DK W + ++ L +S
Sbjct: 680 TRIRDDKDWTNATNLDRLKTLYENS 704
>gi|18029884|gb|AAL56553.1|AF393655_1 DNA ligase III isoform beta [Xenopus laevis]
Length = 906
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 122/288 (42%), Gaps = 35/288 (12%)
Query: 41 MLSQLRSQIMAADQTGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRS 100
M S+++ I AAD D + + +E +E G+VLKD+ S +EPG R
Sbjct: 591 MFSEMKHVIKAADL------------ADMITRVIREGLE----GLVLKDIKSNYEPGKRH 634
Query: 101 GKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFIS 157
WLK+K +Y+ G+ D+ ++G YYG G GG ++ FL+ D + + +
Sbjct: 635 --WLKVKKDYLNEGAMADTADLAVLGAYYGKGANGGIMSIFLMGCY-----DPEGQHWCT 687
Query: 158 FCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSII 217
+ +G D L + +L K PS+ ++ N PD I+ P+K+ I
Sbjct: 688 VTKCSSGYDDATLQRLQKELN--MVKISKDPSKIPSWLKINKNY--FPDFIIQDPKKAPI 743
Query: 218 LSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKE 277
IT + + S+RFPR R R DK W +Q EL S +
Sbjct: 744 WEITGAEYSKAEAHTAGGLSIRFPRCTRFRDDKDWKTATTLQQLKELYRLSKEKSDFNIT 803
Query: 278 YGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQT-----DVSDIKGETS 320
QD+ SSR+ E + ++T S KG+TS
Sbjct: 804 ATSSQDEDGSSECSSRENEGNSTQTSSGSLVKTIKNVPSKSPAKGKTS 851
>gi|345784854|ref|XP_003432611.1| PREDICTED: DNA ligase 1 [Canis lupus familiaris]
Length = 914
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 100/198 (50%), Gaps = 21/198 (10%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEYIRA-GSDL 117
SL + D++ +F ++++++ EG+++K D+ + +E RS WLKLK +Y+ G L
Sbjct: 694 SLDTKDTDQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDGVGDTL 753
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D+++IG Y G G+R G FL+A A D + C++GTG SDEEL+ +L
Sbjct: 754 DLVVIGAYLGRGKRAGRYGGFLLA-----AYDEESEELQAICKLGTGFSDEELEEHYQRL 808
Query: 178 KPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRSEV-F 232
+ P S+ +V + PD W++ K LS++ R V
Sbjct: 809 QALVLP------TPRSYVRV--DGAVAPDHWLDPSAVWEVKCADLSLSPIYPAARGLVDG 860
Query: 233 SAPYSLRFPRIDRVRYDK 250
SLRFPR RVR DK
Sbjct: 861 EKGISLRFPRFIRVREDK 878
>gi|345489172|ref|XP_001601405.2| PREDICTED: DNA ligase 3 [Nasonia vitripennis]
Length = 1031
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 98/191 (51%), Gaps = 14/191 (7%)
Query: 81 RDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGGEVAQ 137
R EG+VLKD+ SK+EPG R WLK+K +Y+ G+ + D++++G +YG+G++GG ++
Sbjct: 566 RLEGLVLKDVDSKYEPGKRH--WLKIKKDYLLQGAMADNADLVVLGAWYGTGQKGGMMSV 623
Query: 138 FLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQV 197
FL+ + P D + ++ +V TG D L + T L + + P P +
Sbjct: 624 FLMGCYD-PDSDIW----VTVTKVHTGHDDATLAKLQTSLD-MIKIGKDPGLIP---RWL 674
Query: 198 TNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLD 257
N PD + P+K + IT T + + S+RFPR+ R+R DK W +
Sbjct: 675 RANKPMIPDFVAKDPKKQPVWEITGAEFTNQGVHTADGISIRFPRVTRIRDDKDWETATN 734
Query: 258 VQSFVELVHSS 268
+ L + S
Sbjct: 735 LHELRALFNRS 745
>gi|307214733|gb|EFN89653.1| DNA ligase 3 [Harpegnathos saltator]
Length = 1035
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 100/204 (49%), Gaps = 14/204 (6%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVL 120
H+ ++ K + ++ EG+VLKD+ SK+EPG R WLK+K +Y+ G+ D++
Sbjct: 553 VHDPQDLTKMIVKVLKQGLEGLVLKDINSKYEPGKRH--WLKVKKDYLCGGAMADSADLV 610
Query: 121 IIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPY 180
++G +YG+G +GG ++ FL+ D ++++ +V TG D L A+ +L
Sbjct: 611 VLGAWYGTGNKGGMMSIFLMGCY-----DEKSDKWLTVTKVHTGHDDATLAALQNELD-- 663
Query: 181 FRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRF 240
K P + + PD + P+K + IT T + + S+RF
Sbjct: 664 MVKIGKDTEKLPDW--LLAKKPMVPDFVAKDPKKQPVWEITGAEFTNQGVHTADGISIRF 721
Query: 241 PRIDRVRYDKPWHDCLDVQSFVEL 264
PR+ R+R+DK W + EL
Sbjct: 722 PRVTRIRHDKNWSTATTLNELREL 745
>gi|301765093|ref|XP_002917926.1| PREDICTED: DNA ligase 1-like [Ailuropoda melanoleuca]
Length = 911
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 99/202 (49%), Gaps = 29/202 (14%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEYIRA-GSDL 117
SL + D++ +F ++++++ EG+++K D+ + +E RS WLKLK +Y+ G L
Sbjct: 690 SLDTKDTDQIAEFLEQSVKDSCEGLMVKTLDVNATYEIAKRSHNWLKLKKDYLDGVGDTL 749
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D+++IG Y G G+R G FL+A A D + C++GTG SDEEL+ KL
Sbjct: 750 DLVVIGAYLGRGKRAGRYGGFLLA-----AYDEESEELQAICKLGTGFSDEELEEHHRKL 804
Query: 178 K----PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRS 229
+ P R Y V + PD W++ K LS++ R
Sbjct: 805 QALVLPTPRPY------------VRADGAVAPDHWLDPSAVWEVKCADLSLSPIYPAARG 852
Query: 230 EV-FSAPYSLRFPRIDRVRYDK 250
V SLRFPR R+R DK
Sbjct: 853 LVDGEKGISLRFPRFIRIREDK 874
>gi|281348405|gb|EFB23989.1| hypothetical protein PANDA_006333 [Ailuropoda melanoleuca]
Length = 909
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 99/202 (49%), Gaps = 29/202 (14%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEYIRA-GSDL 117
SL + D++ +F ++++++ EG+++K D+ + +E RS WLKLK +Y+ G L
Sbjct: 688 SLDTKDTDQIAEFLEQSVKDSCEGLMVKTLDVNATYEIAKRSHNWLKLKKDYLDGVGDTL 747
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D+++IG Y G G+R G FL+A A D + C++GTG SDEEL+ KL
Sbjct: 748 DLVVIGAYLGRGKRAGRYGGFLLA-----AYDEESEELQAICKLGTGFSDEELEEHHRKL 802
Query: 178 K----PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRS 229
+ P R Y V + PD W++ K LS++ R
Sbjct: 803 QALVLPTPRPY------------VRADGAVAPDHWLDPSAVWEVKCADLSLSPIYPAARG 850
Query: 230 EV-FSAPYSLRFPRIDRVRYDK 250
V SLRFPR R+R DK
Sbjct: 851 LVDGEKGISLRFPRFIRIREDK 872
>gi|282165841|ref|NP_001016351.2| DNA ligase (ATP) 3 [Xenopus (Silurana) tropicalis]
gi|195539958|gb|AAI67946.1| Unknown (protein for MGC:136050) [Xenopus (Silurana) tropicalis]
Length = 893
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 94/201 (46%), Gaps = 18/201 (8%)
Query: 67 VDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIG 123
D + + +E +E G+VLKDL S +EPG R WLK+K +Y+ G+ D+ ++G
Sbjct: 604 ADMITRVIREGLE----GLVLKDLKSNYEPGKRH--WLKVKKDYLNEGAMADTADLAVLG 657
Query: 124 GYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRK 183
YYG G GG ++ FL+ D +++ + + +G D L + +L K
Sbjct: 658 AYYGKGANGGIMSIFLMGCY-----DPESQKWCTVTKCSSGYDDATLQRLQKELN--MVK 710
Query: 184 YEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRI 243
PS+ ++ N PD I P+K+ I IT + +A S+RFPR
Sbjct: 711 ISKDPSKIPSWLKINKNY--FPDFIIHDPKKAPIWEITGAEYSKAEAHTAAGLSIRFPRC 768
Query: 244 DRVRYDKPWHDCLDVQSFVEL 264
R R DK W +Q EL
Sbjct: 769 TRFRDDKDWKTATTLQQLKEL 789
>gi|149028347|gb|EDL83753.1| ligase I, DNA, ATP-dependent, isoform CRA_a [Rattus norvegicus]
gi|149028348|gb|EDL83754.1| ligase I, DNA, ATP-dependent, isoform CRA_a [Rattus norvegicus]
Length = 928
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 103/206 (50%), Gaps = 37/206 (17%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEYIRA-GSDL 117
SL +++++ +F ++++++ EG+++K D+ + +E RS WLKLK +Y+ G L
Sbjct: 708 SLDTKDIEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLEGVGDTL 767
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELD----AV 173
D+++IG Y G G+R G FL+A A D + C++GTG SDEEL+ ++
Sbjct: 768 DLVVIGAYLGRGKRAGRYGGFLLA-----AYDEESEELQAICKLGTGFSDEELEEHHQSM 822
Query: 174 VTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFS 233
L P R Y V + PD W++ S++ + ++ S ++
Sbjct: 823 QALLLPTPRPY------------VRIDGAVAPDHWLDP---SVVWEVKCADLSL-SPIYP 866
Query: 234 AP---------YSLRFPRIDRVRYDK 250
A SLRFPR RVR DK
Sbjct: 867 AARGLVDKEKGISLRFPRFIRVREDK 892
>gi|297705333|ref|XP_002829532.1| PREDICTED: LOW QUALITY PROTEIN: DNA ligase 1 [Pongo abelii]
Length = 920
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 111/237 (46%), Gaps = 30/237 (12%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEYIRA-GSDL 117
SL +V+++ +F ++++++ EG+++K D+ + +E RS WLKLK +Y+ G L
Sbjct: 699 SLDTKDVEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLNGVGDTL 758
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D+++IG Y G G+R G FL+A + D + C++GTG SDEEL+ L
Sbjct: 759 DLVVIGAYLGRGKRAGRYGGFLLA-----SYDEDSEELQAICKLGTGFSDEELEEHHQSL 813
Query: 178 K----PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRS 229
K P R Y V + PD W++ K LS++ R
Sbjct: 814 KALVLPSPRPY------------VRIDGAVIPDHWLDPSAVWEVKCADLSLSPIYPAARG 861
Query: 230 EVFS-APYSLRFPRIDRVRYDK-PWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 284
V S SLRFPR RVR DK P Q S Q+G++ G +D
Sbjct: 862 LVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQSQIQNQQGEDSGSDPED 918
>gi|320590780|gb|EFX03223.1| DNA ligase [Grosmannia clavigera kw1407]
Length = 872
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 102/227 (44%), Gaps = 31/227 (13%)
Query: 44 QLRSQIMAADQTGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRS 100
QL S ++ + S+ +DE++ F E++ EG+++K L S +EP RS
Sbjct: 622 QLASAVLPVEGELAFASSMDGRELDEIQTFLDESVRASCEGLMVKMLDGPESAYEPSKRS 681
Query: 101 GKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFC 159
WLK+K +Y+ G LD++++G Y+G G+R FL+A A F + C
Sbjct: 682 RNWLKIKKDYLAGVGDSLDLVVLGAYFGRGKRTSVYGAFLLACYSPSA-----EAFETIC 736
Query: 160 RVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIE--------- 210
+GTG S+ LD + +L + PK FY + + +PDVW E
Sbjct: 737 NIGTGFSEAVLDELHGQLSAIV--IDRPK----PFYAHSAGGQHQPDVWFEPRYVWEVRT 790
Query: 211 -----SP--EKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDK 250
SP + + + + + SLRFPR RVR DK
Sbjct: 791 ADLTLSPRYQAACHEGVDPSADSAQPGATGRGVSLRFPRFIRVRDDK 837
>gi|232006|sp|Q02093.1|DNLI_ACIAM RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|40786|emb|CAA45034.1| DNa ligase [Acidianus ambivalens]
Length = 600
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 105/213 (49%), Gaps = 22/213 (10%)
Query: 62 LVAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRAGSD-LD 118
++ NV+++++FF + I EG+++K L + ++ G R W+K K +Y +D +D
Sbjct: 389 IITDNVEKLKEFFYQAISEGAEGVMVKSLAPDAIYQAGSRGWLWIKFKRDYQSEMADTVD 448
Query: 119 VLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLK 178
++++G ++G GR+GG+ + FL+A A P D F + C+V +G +D ELD + K+
Sbjct: 449 LVMVGAFHGKGRKGGKYSSFLMA-AYNPDKDV----FETVCKVASGFTDAELDDLQKKIA 503
Query: 179 PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRS----EVFSA 234
R +P+ S PDVW+ + I+ I + + +
Sbjct: 504 ELKRDTPHPRVV----------STMVPDVWLTPALVAEIIGAEITISPLHTCCKDQYAEG 553
Query: 235 PYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 267
S+RFPR R R DK D + +E+ S
Sbjct: 554 GLSIRFPRFIRWRPDKSPEDATTNREILEMYKS 586
>gi|325188612|emb|CCA23144.1| DNA ligase putative [Albugo laibachii Nc14]
Length = 882
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 98/195 (50%), Gaps = 27/195 (13%)
Query: 67 VDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIG 123
+ + F ++ E EG+++K L + +EP +RS KWLK+K +Y+ G D++ IG
Sbjct: 668 ISHIRSFLEKATEEHCEGLMVKTLDEDATYEPANRSHKWLKVKKDYLDGIGDSTDLIPIG 727
Query: 124 GYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRK 183
++G G+R G +L+A + P D Y ++GTGLSDE L + +L+ +K
Sbjct: 728 AFHGRGKRTGVYGAYLLACYD-PDLDMYQ----CITKLGTGLSDEMLRELHAQLQS--KK 780
Query: 184 YEYPKRAPPSFYQVTNNSKERPDVWIE--------SPEKSIILSITSDIRTIRSEVFSAP 235
E P Y VT+N K PDVW E + SI T+ + I E
Sbjct: 781 VE----QIPREYVVTDNIK--PDVWFEPSCVWEILGADLSISPKYTAAMGLIARE---KG 831
Query: 236 YSLRFPRIDRVRYDK 250
SLRFPR R+R DK
Sbjct: 832 ISLRFPRFIRIRDDK 846
>gi|392343903|ref|XP_003748816.1| PREDICTED: DNA ligase 1-like, partial [Rattus norvegicus]
Length = 831
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 103/206 (50%), Gaps = 37/206 (17%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEYIRA-GSDL 117
SL +++++ +F ++++++ EG+++K D+ + +E RS WLKLK +Y+ G L
Sbjct: 611 SLDTKDIEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLEGVGDTL 670
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELD----AV 173
D+++IG Y G G+R G FL+A A D + C++GTG SDEEL+ ++
Sbjct: 671 DLVVIGAYLGRGKRAGRYGGFLLA-----AYDEESEELQAICKLGTGFSDEELEEHHQSM 725
Query: 174 VTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFS 233
L P R Y V + PD W++ S++ + ++ S ++
Sbjct: 726 QALLLPTPRPY------------VRIDGAVAPDHWLDP---SVVWEVKCADLSL-SPIYP 769
Query: 234 AP---------YSLRFPRIDRVRYDK 250
A SLRFPR RVR DK
Sbjct: 770 AARGLVDKEKGISLRFPRFIRVREDK 795
>gi|332796299|ref|YP_004457799.1| ATP-dependent DNA ligase I [Acidianus hospitalis W1]
gi|332694034|gb|AEE93501.1| DNA ligase I, ATP-dependent Dnl1 [Acidianus hospitalis W1]
Length = 600
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 105/213 (49%), Gaps = 22/213 (10%)
Query: 62 LVAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRAGSD-LD 118
++ NV+++++FF + I EG+++K L + ++ G R W+K K +Y +D +D
Sbjct: 389 IITDNVEKLKEFFYQAISEGAEGVMVKSLAPDAIYQAGSRGWLWIKFKRDYQSEMADTVD 448
Query: 119 VLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLK 178
++++G ++G GR+GG+ + FL+A A P D F + C+V +G +D ELD + K+
Sbjct: 449 LVMVGAFHGKGRKGGKYSSFLMA-AYNPDKDV----FETVCKVASGFTDAELDDLQKKIA 503
Query: 179 PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRS----EVFSA 234
R +P+ S PDVW+ + I+ I + + +
Sbjct: 504 ELKRDSPHPRVV----------STMVPDVWLTPALVAEIIGAEITISPLHTCCKDQYAEG 553
Query: 235 PYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 267
S+RFPR R R DK D + +E+ S
Sbjct: 554 GLSIRFPRFIRWRPDKSPEDATTNREILEMYKS 586
>gi|384940622|gb|AFI33916.1| DNA ligase 1 [Macaca mulatta]
Length = 919
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 111/237 (46%), Gaps = 30/237 (12%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEYIRA-GSDL 117
SL +V+++ +F ++++++ EG+++K D+ + +E RS WLKLK +Y+ G L
Sbjct: 698 SLDTKDVEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDGVGDTL 757
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D+++IG Y G G+R G FL+A + D + C++GTG SDEEL+ L
Sbjct: 758 DLVVIGAYLGRGKRAGRYGGFLLA-----SYDEDSEELQAICKLGTGFSDEELEEHHQSL 812
Query: 178 K----PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRS 229
K P R Y V + PD W++ K LS++ R
Sbjct: 813 KALVLPSPRPY------------VRIDGAVTPDHWLDPSAVWEVKCADLSLSPIYPAARG 860
Query: 230 EVFS-APYSLRFPRIDRVRYDK-PWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 284
V S SLRFPR RVR DK P Q S Q+G++ G +D
Sbjct: 861 LVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQSQIQNQQGEDSGSDPED 917
>gi|296416928|ref|XP_002838121.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295634027|emb|CAZ82312.1| unnamed protein product [Tuber melanosporum]
Length = 976
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 118/269 (43%), Gaps = 45/269 (16%)
Query: 27 VAMND-GICVCVHVYMLSQL------------RSQIMAADQTGEPCWSLVAHNVD----- 68
VA+ D I VCVH + L L R ++M P + A +D
Sbjct: 700 VALEDVKIRVCVHAFDLLFLNGKPVVRESLDDRRKLMHKTFIEVPNQFVFARYMDSSHLE 759
Query: 69 EVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIGG 124
E+ F +++++ EG+++K + S +EP RS WLK+K +YI G LD+++IG
Sbjct: 760 EIRLFLDQSVKDSCEGLMVKMMDGPESFYEPSQRSRNWLKIKKDYIDELGDSLDLVVIGA 819
Query: 125 YYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKY 184
Y+G G+R FL+A P T + + S C +GTG ++ EL+ L P
Sbjct: 820 YWGRGKRTSVYGSFLLACYN---PGT--QNYESLCNIGTGFTEAELEEFYGTLHP----L 870
Query: 185 EYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP--------- 235
E + P FY + + +PDVW E ++ + + T+ +A
Sbjct: 871 EIDRAKP--FYDHPSGNAGKPDVWFEP---KVLWEVKAADLTLSPRYKAAAGLAGHPDKG 925
Query: 236 YSLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
SLRFPR R DK D E+
Sbjct: 926 VSLRFPRFIGPRTDKTGEDATSSSQIAEM 954
>gi|405122241|gb|AFR97008.1| DNA ligase [Cryptococcus neoformans var. grubii H99]
Length = 801
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 101/201 (50%), Gaps = 38/201 (18%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDL---GSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLI 121
+E++ +E++++ EG+++K L S +EP RS WLKLK +Y+ G LD+++
Sbjct: 588 TTEEIQALLEESVKDGCEGLMVKMLTSESSTYEPSRRSMNWLKLKKDYLSGVGDSLDLVV 647
Query: 122 IGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYF 181
IG Y+G G+R FL+A + PD+ + + C++GTG S+E L LKP
Sbjct: 648 IGAYHGKGKRTAVYGAFLLACYD---PDS--EHYQTICKIGTGFSEEILAQFYEILKPL- 701
Query: 182 RKYEYPKRAPPSFYQVTNNSKE----RPDVWIESPEKSIILSITSDIRTIRSEVFSAPY- 236
+V E +PDVW E + + +T+D+ S +++A +
Sbjct: 702 ------------ELEVVRGDIEVGGAKPDVWFEP--RVVWEVLTADLSL--SPIYAAAHG 745
Query: 237 -------SLRFPRIDRVRYDK 250
SLRFPR R+R DK
Sbjct: 746 VIDSRGISLRFPRFIRIRDDK 766
>gi|432901473|ref|XP_004076853.1| PREDICTED: DNA ligase 3-like [Oryzias latipes]
Length = 1011
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 103/206 (50%), Gaps = 20/206 (9%)
Query: 67 VDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIG 123
D + + +E +E G+VLKD+ S +EPG R WLK+K +Y+ G+ D++++G
Sbjct: 645 ADMITRVIREGLE----GLVLKDIKSTYEPGKRH--WLKVKKDYLNEGAMADTADLVVLG 698
Query: 124 GYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRK 183
+YG G GG ++ FL+ + PD+ ++ C +G D+ + A + K +
Sbjct: 699 AFYGKGSNGGIMSSFLMGCYD---PDSKKWCTVTKC---SGGYDDAMLARLQKELDVIKI 752
Query: 184 YEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA-PYSLRFPR 242
+ P + P V N PD I PEK+ + IT +SE+ +A S+RFPR
Sbjct: 753 SKEPSKIPGWLKIVKNYY---PDFIIRDPEKAPVWEITG-AEFSKSEMHTADGISIRFPR 808
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSS 268
+ R+R DK W ++ EL S
Sbjct: 809 MTRIRDDKDWKTATNLHQLRELFRIS 834
>gi|401883830|gb|EJT48014.1| DNA ligase [Trichosporon asahii var. asahii CBS 2479]
Length = 358
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 113/235 (48%), Gaps = 44/235 (18%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLGS---KWEPGDRSGKWLKLKPEYIRA-GSDLDVLI 121
+E++ F +E++++ EG+++K L S +EP RS WLK +Y+ G LD+++
Sbjct: 150 TTEEIQTFLEESVKDGCEGLMVKMLASDASTYEPSRRSINWLK--KDYLSGVGDSLDLVV 207
Query: 122 IGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYF 181
+G YYG G+R FL+A + PD+ + + C++GTG S+E L +L P
Sbjct: 208 VGAYYGKGKRTNWYGAFLLACYD---PDS--ENYQTICKIGTGFSEEILKQFYDELHP-- 260
Query: 182 RKYEYPKRAPPSFYQVTNNSK-------ERPDVWIESPEKSIILSITSDIRTIRSEVFSA 234
++T ++ +PDVW E K + +T+D+ S V++A
Sbjct: 261 -------------LELTGGARGNIEVGGAKPDVWFEP--KVVWEVLTADLSL--SPVYTA 303
Query: 235 PY-----SLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 284
+ SLRFPR +VR DK + + + S T GK+ G DD
Sbjct: 304 AHGLRGISLRFPRFIKVRDDKGPEEATTAEQVADFYQSQ--ATAAGKKGGAAVDD 356
>gi|383418319|gb|AFH32373.1| DNA ligase 1 [Macaca mulatta]
Length = 919
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 111/237 (46%), Gaps = 30/237 (12%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEYIRA-GSDL 117
SL +V+++ +F ++++++ EG+++K D+ + +E RS WLKLK +Y+ G L
Sbjct: 698 SLDTKDVEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDGVGDTL 757
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D+++IG Y G G+R G FL+A + D + C++GTG SDEEL+ L
Sbjct: 758 DLVVIGAYLGRGKRAGRYGGFLLA-----SYDEDSEELQAICKLGTGFSDEELEEHHQSL 812
Query: 178 K----PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRS 229
K P R Y V + PD W++ K LS++ R
Sbjct: 813 KALVLPSPRPY------------VRIDGAVTPDHWLDPSAVWEVKCADLSLSPIYPAARG 860
Query: 230 EVFS-APYSLRFPRIDRVRYDK-PWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 284
V S SLRFPR RVR DK P Q S Q+G++ G +D
Sbjct: 861 LVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQSQIQNQQGEDSGSDPED 917
>gi|402906132|ref|XP_003915858.1| PREDICTED: DNA ligase 1 isoform 3 [Papio anubis]
Length = 888
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 111/237 (46%), Gaps = 30/237 (12%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEYIRA-GSDL 117
SL +V+++ +F ++++++ EG+++K D+ + +E RS WLKLK +Y+ G L
Sbjct: 667 SLDTKDVEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDGVGDTL 726
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D+++IG Y G G+R G FL+A + D + C++GTG SDEEL+ L
Sbjct: 727 DLVVIGAYLGRGKRAGRYGGFLLA-----SYDEDSEELQAICKLGTGFSDEELEEHHQSL 781
Query: 178 K----PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRS 229
K P R Y V + PD W++ K LS++ R
Sbjct: 782 KALVLPSPRPY------------VRIDGAVTPDHWLDPSAVWEVKCADLSLSPIYPAARG 829
Query: 230 EVFS-APYSLRFPRIDRVRYDK-PWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 284
V S SLRFPR RVR DK P Q S Q+G++ G +D
Sbjct: 830 LVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQSQIQNQQGEDSGSDPED 886
>gi|66730439|ref|NP_001019439.1| DNA ligase 1 [Rattus norvegicus]
gi|62471446|gb|AAH93604.1| Ligase I, DNA, ATP-dependent [Rattus norvegicus]
Length = 913
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 103/206 (50%), Gaps = 37/206 (17%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEYIRA-GSDL 117
SL +++++ +F ++++++ EG+++K D+ + +E RS WLKLK +Y+ G L
Sbjct: 693 SLDTKDIEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLEGVGDTL 752
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELD----AV 173
D+++IG Y G G+R G FL+A A D + C++GTG SDEEL+ ++
Sbjct: 753 DLVVIGAYLGRGKRAGRYGGFLLA-----AYDEESEELQAICKLGTGFSDEELEEHHQSM 807
Query: 174 VTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFS 233
L P R Y V + PD W++ S++ + ++ S ++
Sbjct: 808 QALLLPTPRPY------------VRIDGAVAPDHWLDP---SVVWEVKCADLSL-SPIYP 851
Query: 234 AP---------YSLRFPRIDRVRYDK 250
A SLRFPR RVR DK
Sbjct: 852 AARGLVDKEKGISLRFPRFIRVREDK 877
>gi|58270892|ref|XP_572602.1| DNA ligase [Cryptococcus neoformans var. neoformans JEC21]
gi|134115296|ref|XP_773946.1| hypothetical protein CNBH3980 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256574|gb|EAL19299.1| hypothetical protein CNBH3980 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57228861|gb|AAW45295.1| DNA ligase, putative [Cryptococcus neoformans var. neoformans
JEC21]
Length = 803
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 101/201 (50%), Gaps = 38/201 (18%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDL---GSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLI 121
+E++ +E++++ EG+++K L S +EP RS WLKLK +Y+ G LD+++
Sbjct: 590 TTEEIQALLEESVKDGCEGLMVKMLTSESSTYEPSRRSMNWLKLKKDYLSGVGDSLDLVV 649
Query: 122 IGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYF 181
+G Y+G G+R FL+A + PD+ + + C++GTG S+E L LKP
Sbjct: 650 VGAYHGKGKRTAVYGAFLLACYD---PDS--EHYQTICKIGTGFSEEILTQFYELLKPL- 703
Query: 182 RKYEYPKRAPPSFYQVTNNSKE----RPDVWIESPEKSIILSITSDIRTIRSEVFSAPY- 236
+V E +PDVW E + + +T+D+ S +++A +
Sbjct: 704 ------------ELEVVRGDIEVGGAKPDVWFEP--RVVWEVLTADLSL--SPIYAAAHG 747
Query: 237 -------SLRFPRIDRVRYDK 250
SLRFPR R+R DK
Sbjct: 748 VIDSRGISLRFPRFIRIRDDK 768
>gi|426389527|ref|XP_004061171.1| PREDICTED: DNA ligase 1 [Gorilla gorilla gorilla]
Length = 906
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 111/237 (46%), Gaps = 30/237 (12%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEYIRA-GSDL 117
SL +V+++ +F ++++++ EG+++K D+ + +E RS WLKLK +Y+ G L
Sbjct: 685 SLDTKDVEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDGVGDTL 744
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D+++IG Y G G+R G FL+A + D + C++GTG SDEEL+ L
Sbjct: 745 DLVVIGAYLGRGKRAGRYGGFLLA-----SYDEDSEELQAICKLGTGFSDEELEEHHQSL 799
Query: 178 K----PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRS 229
K P R Y V + PD W++ K LS++ R
Sbjct: 800 KALVLPSPRPY------------VRIDGAVIPDHWLDPSAVWEVKCADLSLSPIYPAARG 847
Query: 230 EVFS-APYSLRFPRIDRVRYDK-PWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 284
V S SLRFPR RVR DK P Q S Q+G++ G +D
Sbjct: 848 LVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQSQIQNQQGEDSGSDPED 904
>gi|268558410|ref|XP_002637195.1| C. briggsae CBR-LIG-1 protein [Caenorhabditis briggsae]
Length = 780
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 107/219 (48%), Gaps = 35/219 (15%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLKDLGSK--WEPGDRSGKWLKLKPEYIRA-GSDL 117
S+ + DE+ FF E I+N+ EG+++K L ++ +E RS WLK+K +Y+ G L
Sbjct: 422 SVDTMDTDEINSFFDEAIQNKCEGLMIKTLDTEATYEISRRSKSWLKMKKDYVDGVGDTL 481
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D++++G Y G+G+R G +L+ P + Y S C++GTG +DE+L L
Sbjct: 482 DLVVMGAYVGNGKRTGVYGGYLLG-CYNPTTEEYE----SVCKIGTGFTDEDLSEQFKIL 536
Query: 178 K-------PYFRKYEYPKR-----APPSFYQVTNNSKERPDVWIESPEKSIILSITSDIR 225
+ P + +++ + AP ++V + D+ I SP +T D +
Sbjct: 537 QEKKIDRAPVYYQFDPTLKPDDIFAPHLVFEV-----KCADITI-SPRHKAAGGLTEDGK 590
Query: 226 TIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
I SLRFPR R+R DK D + +E+
Sbjct: 591 GI---------SLRFPRFLRIRDDKNPDDATSSEQVLEM 620
>gi|337283857|ref|YP_004623331.1| ATP-dependent DNA ligase [Pyrococcus yayanosii CH1]
gi|334899791|gb|AEH24059.1| ATP-dependent DNA ligase [Pyrococcus yayanosii CH1]
Length = 588
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 103/216 (47%), Gaps = 31/216 (14%)
Query: 49 IMAADQTGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKP 108
I+ AD + +L+ +V+E E F+++ + EG++ K L S +EPG+R KWLK+KP
Sbjct: 391 IIEADGWIKVAENLITKSVEEAESFYRKALGMGHEGLMAKRLDSVYEPGNRGKKWLKIKP 450
Query: 109 EYIRAGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDE 168
+LD++IIG +G GRR F++ A D + F+ +VG+G +DE
Sbjct: 451 TM----ENLDLVIIGAEWGEGRRAHVFGSFILG-----AYDPHTGEFVEVGKVGSGFTDE 501
Query: 169 ELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIR 228
+L LK K E + VW E K +I +I+ +
Sbjct: 502 DLIEFTKMLKRLITKEEGKR------------------VWFEP--KVVIEVTYQEIQ--K 539
Query: 229 SEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
S + + ++LRFPR +R DK D ++ +L
Sbjct: 540 SPKYRSGFALRFPRYVALRDDKGPEDADTIERIAQL 575
>gi|109125447|ref|XP_001111346.1| PREDICTED: DNA ligase 1 isoform 1 [Macaca mulatta]
Length = 919
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 111/237 (46%), Gaps = 30/237 (12%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEYIRA-GSDL 117
SL +V+++ +F ++++++ EG+++K D+ + +E RS WLKLK +Y+ G L
Sbjct: 698 SLDTKDVEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDGVGDTL 757
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D+++IG Y G G+R G FL+A + D + C++GTG SDEEL+ L
Sbjct: 758 DLVVIGAYLGRGKRAGRYGGFLLA-----SYDEDSEELQAICKLGTGFSDEELEEHHQSL 812
Query: 178 K----PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRS 229
K P R Y V + PD W++ K LS++ R
Sbjct: 813 KALVLPSPRPY------------VRIDGAVTPDHWLDPSAVWEVKCADLSLSPIYPAARG 860
Query: 230 EVFS-APYSLRFPRIDRVRYDK-PWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 284
V S SLRFPR RVR DK P Q S Q+G++ G +D
Sbjct: 861 LVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQSQIQNQQGEDSGSDPED 917
>gi|402906128|ref|XP_003915856.1| PREDICTED: DNA ligase 1 isoform 1 [Papio anubis]
Length = 919
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 111/237 (46%), Gaps = 30/237 (12%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEYIRA-GSDL 117
SL +V+++ +F ++++++ EG+++K D+ + +E RS WLKLK +Y+ G L
Sbjct: 698 SLDTKDVEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDGVGDTL 757
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D+++IG Y G G+R G FL+A + D + C++GTG SDEEL+ L
Sbjct: 758 DLVVIGAYLGRGKRAGRYGGFLLA-----SYDEDSEELQAICKLGTGFSDEELEEHHQSL 812
Query: 178 K----PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRS 229
K P R Y V + PD W++ K LS++ R
Sbjct: 813 KALVLPSPRPY------------VRIDGAVTPDHWLDPSAVWEVKCADLSLSPIYPAARG 860
Query: 230 EVFS-APYSLRFPRIDRVRYDK-PWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 284
V S SLRFPR RVR DK P Q S Q+G++ G +D
Sbjct: 861 LVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQSQIQNQQGEDSGSDPED 917
>gi|297277484|ref|XP_002801366.1| PREDICTED: DNA ligase 1 isoform 2 [Macaca mulatta]
Length = 975
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 111/237 (46%), Gaps = 30/237 (12%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEYIRA-GSDL 117
SL +V+++ +F ++++++ EG+++K D+ + +E RS WLKLK +Y+ G L
Sbjct: 754 SLDTKDVEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDGVGDTL 813
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D+++IG Y G G+R G FL+A + D + C++GTG SDEEL+ L
Sbjct: 814 DLVVIGAYLGRGKRAGRYGGFLLA-----SYDEDSEELQAICKLGTGFSDEELEEHHQSL 868
Query: 178 K----PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRS 229
K P R Y V + PD W++ K LS++ R
Sbjct: 869 KALVLPSPRPY------------VRIDGAVTPDHWLDPSAVWEVKCADLSLSPIYPAARG 916
Query: 230 EVFS-APYSLRFPRIDRVRYDK-PWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 284
V S SLRFPR RVR DK P Q S Q+G++ G +D
Sbjct: 917 LVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQSQIQNQQGEDSGSDPED 973
>gi|297277487|ref|XP_002801367.1| PREDICTED: DNA ligase 1 isoform 3 [Macaca mulatta]
Length = 888
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 111/237 (46%), Gaps = 30/237 (12%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEYIRA-GSDL 117
SL +V+++ +F ++++++ EG+++K D+ + +E RS WLKLK +Y+ G L
Sbjct: 667 SLDTKDVEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDGVGDTL 726
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D+++IG Y G G+R G FL+A + D + C++GTG SDEEL+ L
Sbjct: 727 DLVVIGAYLGRGKRAGRYGGFLLA-----SYDEDSEELQAICKLGTGFSDEELEEHHQSL 781
Query: 178 K----PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRS 229
K P R Y V + PD W++ K LS++ R
Sbjct: 782 KALVLPSPRPY------------VRIDGAVTPDHWLDPSAVWEVKCADLSLSPIYPAARG 829
Query: 230 EVFS-APYSLRFPRIDRVRYDK-PWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 284
V S SLRFPR RVR DK P Q S Q+G++ G +D
Sbjct: 830 LVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQSQIQNQQGEDSGSDPED 886
>gi|315050570|ref|XP_003174659.1| DNA ligase [Arthroderma gypseum CBS 118893]
gi|311339974|gb|EFQ99176.1| DNA ligase [Arthroderma gypseum CBS 118893]
Length = 890
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 28/215 (13%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLI 121
+++E++ E+++ EG+++K L S +EP RS WLK+K +Y+ G LD+++
Sbjct: 666 DLEEIQTMLDESVKASCEGLMVKMLDTEDSGYEPSKRSRNWLKVKKDYLAGIGDSLDLVV 725
Query: 122 IGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYF 181
+G Y+G G+R FL+A A P Y + C +GTG S+ L+ + L P
Sbjct: 726 LGAYFGRGKRTSVYGAFLLA-AYNPKTQNYE----TICNIGTGFSEALLEELHETLSPLV 780
Query: 182 RKYEYPKRAPPSFYQVTNNSKERPDVWIESPE-----KSIILSITSDIRTIRSEVFSAP- 235
P FY + K++PDVW E P+ K+ L+++ EV +
Sbjct: 781 ID------KPKPFYSHSTVPKDQPDVWFE-PKFVWEVKAADLTLSPRYSAASDEVMGSTG 833
Query: 236 ------YSLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
SLRFPR + R DK ++ E+
Sbjct: 834 GSTAKGISLRFPRYIKAREDKKPDQATTTKAVAEM 868
>gi|326478881|gb|EGE02891.1| DNA ligase [Trichophyton equinum CBS 127.97]
Length = 889
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 107/235 (45%), Gaps = 29/235 (12%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLI 121
+++E++ E+++ EG+++K L S +EP RS WLK+K +Y+ G LD+++
Sbjct: 665 DLEEIQTMLDESVKASCEGLMVKMLDTEDSGYEPSKRSRNWLKVKKDYLAGIGDSLDLVV 724
Query: 122 IGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYF 181
+G Y+G G+R FL+A A P Y + C +GTG S+ L+ + L P
Sbjct: 725 LGAYFGRGKRTSVYGAFLLA-AYNPKTQNYE----TICNIGTGFSEALLEELHETLSPLV 779
Query: 182 RKYEYPKRAPPSFYQVTNNSKERPDVWIESPE-----KSIILSITSDIRTIRSEVF---- 232
P FY + K++PDVW E P+ K+ L+++ EV
Sbjct: 780 ID------KPKPFYSHSTVPKDQPDVWFE-PKFVWEVKAADLTLSPRYSAASDEVMGNTG 832
Query: 233 ---SAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 284
+ SLRFPR + R DK ++ E+ K G + DD
Sbjct: 833 GSTAKGISLRFPRYIKARDDKKPDQATTTKAVAEMYRKQESVAMD-KTKGAVDDD 886
>gi|302509298|ref|XP_003016609.1| hypothetical protein ARB_04898 [Arthroderma benhamiae CBS 112371]
gi|291180179|gb|EFE35964.1| hypothetical protein ARB_04898 [Arthroderma benhamiae CBS 112371]
Length = 909
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 107/235 (45%), Gaps = 29/235 (12%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLI 121
+++E++ E+++ EG+++K L S +EP RS WLK+K +Y+ G LD+++
Sbjct: 685 DLEEIQTMLDESVKASCEGLMVKMLDTEDSGYEPSKRSRNWLKVKKDYLAGIGDSLDLVV 744
Query: 122 IGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYF 181
+G Y+G G+R FL+A A P Y + C +GTG S+ L+ + L P
Sbjct: 745 LGAYFGRGKRTSVYGAFLLA-AYNPKTQNYE----TICNIGTGFSEALLEELHETLSPLV 799
Query: 182 RKYEYPKRAPPSFYQVTNNSKERPDVWIESPE-----KSIILSITSDIRTIRSEVF---- 232
P FY + K++PDVW E P+ K+ L+++ EV
Sbjct: 800 ID------KPKPFYSHSTVPKDQPDVWFE-PKFVWEVKAADLTLSPRYSAASDEVMGNTG 852
Query: 233 ---SAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 284
+ SLRFPR + R DK ++ E+ K G + DD
Sbjct: 853 GSAAKGISLRFPRYIKARDDKKPDQATTTKAVAEMYRKQESVAMD-KTKGAVDDD 906
>gi|315231717|ref|YP_004072153.1| ATP-dependent DNA ligase [Thermococcus barophilus MP]
gi|315184745|gb|ADT84930.1| ATP-dependent DNA ligase [Thermococcus barophilus MP]
Length = 561
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 36/210 (17%)
Query: 60 WSLVAHNV-----DEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAG 114
W VA N+ +E E+F+ + ++ EG++ K L S +EPG+R KWLK+KP
Sbjct: 371 WIKVAENLITKSPEEAEEFYHKALDMGHEGLMAKRLDSVYEPGNRGKKWLKIKPTM---- 426
Query: 115 SDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVV 174
+LD++IIG +G GRR ++ FL+ A P T F+ +VG+G +DE+L
Sbjct: 427 ENLDLVIIGAEWGEGRRAHVLSSFLLG-AYDPGTGT----FVPVGKVGSGFTDEDLVEFT 481
Query: 175 TKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA 234
LKP +K + F ++ P V IE + I +S + +
Sbjct: 482 KMLKPLIKKEK------GKFVEI------EPKVVIEVTYQEI----------QKSPKYES 519
Query: 235 PYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
++LRFPR +R DK D ++ +L
Sbjct: 520 GFALRFPRYVALREDKSPEDADTLERIAQL 549
>gi|327303420|ref|XP_003236402.1| DNA ligase I [Trichophyton rubrum CBS 118892]
gi|326461744|gb|EGD87197.1| DNA ligase I [Trichophyton rubrum CBS 118892]
Length = 889
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 107/235 (45%), Gaps = 29/235 (12%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLI 121
+++E++ E+++ EG+++K L S +EP RS WLK+K +Y+ G LD+++
Sbjct: 665 DLEEIQTMLDESVKASCEGLMVKMLDTEDSGYEPSKRSRNWLKVKKDYLAGIGDSLDLVV 724
Query: 122 IGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYF 181
+G Y+G G+R FL+A A P Y + C +GTG S+ L+ + L P
Sbjct: 725 LGAYFGRGKRTSVYGAFLLA-AYNPKTQNYE----TICNIGTGFSEALLEELHETLSPLV 779
Query: 182 RKYEYPKRAPPSFYQVTNNSKERPDVWIESPE-----KSIILSITSDIRTIRSEVF---- 232
P FY + K++PDVW E P+ K+ L+++ EV
Sbjct: 780 ID------KPKPFYSHSTVPKDQPDVWFE-PKFVWEVKAADLTLSPRYSAASDEVMGNTG 832
Query: 233 ---SAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 284
+ SLRFPR + R DK ++ E+ K G + DD
Sbjct: 833 GSAAKGISLRFPRYIKARDDKKPDQATTTKAVAEMYRKQESVAMD-KTKGAVDDD 886
>gi|302656594|ref|XP_003020049.1| hypothetical protein TRV_05913 [Trichophyton verrucosum HKI 0517]
gi|291183829|gb|EFE39425.1| hypothetical protein TRV_05913 [Trichophyton verrucosum HKI 0517]
Length = 908
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 107/235 (45%), Gaps = 29/235 (12%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLI 121
+++E++ E+++ EG+++K L S +EP RS WLK+K +Y+ G LD+++
Sbjct: 684 DLEEIQTMLDESVKASCEGLMVKMLDTEDSGYEPSKRSRNWLKVKKDYLAGIGDSLDLVV 743
Query: 122 IGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYF 181
+G Y+G G+R FL+A A P Y + C +GTG S+ L+ + L P
Sbjct: 744 LGAYFGRGKRTSVYGAFLLA-AYNPKTQNYE----TICNIGTGFSEALLEELHETLSPLV 798
Query: 182 RKYEYPKRAPPSFYQVTNNSKERPDVWIESPE-----KSIILSITSDIRTIRSEVF---- 232
P FY + K++PDVW E P+ K+ L+++ EV
Sbjct: 799 ID------KPKPFYSHSTVPKDQPDVWFE-PKFVWEVKAADLTLSPRYSAASDEVMGNTG 851
Query: 233 ---SAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 284
+ SLRFPR + R DK ++ E+ K G + DD
Sbjct: 852 GSAAKGISLRFPRYIKARDDKKPDQATTTKAVAEMYRKQESVAMD-KTKGAVDDD 905
>gi|380798769|gb|AFE71260.1| DNA ligase 1, partial [Macaca mulatta]
Length = 443
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 109/233 (46%), Gaps = 22/233 (9%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEYIRA-GSDL 117
SL +V+++ +F ++++++ EG+++K D+ + +E RS WLKLK +Y+ G L
Sbjct: 222 SLDTKDVEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDGVGDTL 281
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D+++IG Y G G+R G FL+A + D + C++GTG SDEEL+ L
Sbjct: 282 DLVVIGAYLGRGKRAGRYGGFLLA-----SYDEDSEELQAICKLGTGFSDEELEEHHQSL 336
Query: 178 KPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRSEVFS 233
K P V + PD W++ K LS++ R V S
Sbjct: 337 KALVLPSPRP--------YVRIDGAVTPDHWLDPSAVWEVKCADLSLSPIYPAARGLVDS 388
Query: 234 -APYSLRFPRIDRVRYDK-PWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 284
SLRFPR RVR DK P Q S Q+G++ G +D
Sbjct: 389 DKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQSQIQNQQGEDSGSDPED 441
>gi|14423666|sp|Q9JHY8.1|DNLI1_RAT RecName: Full=DNA ligase 1; AltName: Full=DNA ligase I; AltName:
Full=Polydeoxyribonucleotide synthase [ATP] 1
gi|9050023|gb|AAF82585.1|AF276774_1 DNA ligase I [Rattus norvegicus]
Length = 918
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 102/205 (49%), Gaps = 35/205 (17%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEYIRA-GSDL 117
SL +++++ +F ++++++ EG+++K D+ + +E RS WLKLK +Y+ G L
Sbjct: 698 SLDTKDIEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLEGVGDTL 757
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDA----V 173
D+++IG Y G G+R G FL+A A D + C++GTG SDEEL+ +
Sbjct: 758 DLVVIGAYLGRGKRPGRYGGFLLA-----AYDEESEELAAICKLGTGFSDEELEEHHQNM 812
Query: 174 VTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSII-------LSITSDIRT 226
L P R Y V + P+ W++ SI+ L+++ R
Sbjct: 813 QALLLPTPRPY------------VRIDGAVAPNHWLDP---SIVWEVKCADLTLSPIYRA 857
Query: 227 IRSEV-FSAPYSLRFPRIDRVRYDK 250
R V SLRFPR RVR DK
Sbjct: 858 ARGMVDKEKGISLRFPRFIRVREDK 882
>gi|313235968|emb|CBY25113.1| unnamed protein product [Oikopleura dioica]
Length = 1020
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 120/281 (42%), Gaps = 50/281 (17%)
Query: 26 TVAMNDGICVCVHVYMLSQLRSQIMAADQTGEPCWSLVAH-----------------NVD 68
VA + VC+H + L L + + E L H +D
Sbjct: 762 AVASEIKVQVCIHAFDLLYLNGESLVKKSLRERRELLHTHFKSIEGEFVFATARDMSEID 821
Query: 69 EVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAG--SDLDVLIIGGYY 126
E++ F + +++ EG+++K L +E RS WLKLK +Y+ +G +DVL++G YY
Sbjct: 822 ELQVFLDQAVKDSTEGLMVKALEDSYEISKRSHSWLKLKKDYLGSGVADSVDVLVMGAYY 881
Query: 127 GSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEY 186
G G+R G FL+ + D + + C++GTGL+DE L + +
Sbjct: 882 GKGKRSGNYGGFLLGVF-----DADNEEYQTVCKLGTGLTDENL-----------KLFTE 925
Query: 187 PKRAPPSFYQVTNNSKERPDVWIESPE-----KSIILSITSDIRTIRSEVF--SAPYSLR 239
P++ +V + DV+ E PE K LSI S + T + + + SLR
Sbjct: 926 PRKNRTIVLEVFS-----ADVYFE-PEMVWEIKCADLSI-SPVHTAATGLADPAKGISLR 978
Query: 240 FPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGG 280
FPR R R DK E+ ++S Q GG
Sbjct: 979 FPRFIRERDDKSPEMATSADQIYEM-YNSQDVIQNSAARGG 1018
>gi|297277489|ref|XP_002801368.1| PREDICTED: DNA ligase 1 isoform 4 [Macaca mulatta]
Length = 851
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 111/237 (46%), Gaps = 30/237 (12%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEYIRA-GSDL 117
SL +V+++ +F ++++++ EG+++K D+ + +E RS WLKLK +Y+ G L
Sbjct: 630 SLDTKDVEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDGVGDTL 689
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D+++IG Y G G+R G FL+A + D + C++GTG SDEEL+ L
Sbjct: 690 DLVVIGAYLGRGKRAGRYGGFLLA-----SYDEDSEELQAICKLGTGFSDEELEEHHQSL 744
Query: 178 K----PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRS 229
K P R Y V + PD W++ K LS++ R
Sbjct: 745 KALVLPSPRPY------------VRIDGAVTPDHWLDPSAVWEVKCADLSLSPIYPAARG 792
Query: 230 EVFS-APYSLRFPRIDRVRYDK-PWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 284
V S SLRFPR RVR DK P Q S Q+G++ G +D
Sbjct: 793 LVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQSQIQNQQGEDSGSDPED 849
>gi|344285688|ref|XP_003414592.1| PREDICTED: LOW QUALITY PROTEIN: DNA ligase 3-like [Loxodonta
africana]
Length = 1014
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 105/206 (50%), Gaps = 20/206 (9%)
Query: 67 VDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIG 123
VD + + +E +E G+VLKD+ S +EPG R WLK+K +Y+ G+ D+L++G
Sbjct: 643 VDMINRVIREGLE----GLVLKDVKSTYEPGKRH--WLKVKKDYLNEGAMADTADLLVLG 696
Query: 124 GYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRK 183
+YG G +GG ++ FL+ D +++ + + G D L + T+L +
Sbjct: 697 AFYGQGSKGGMMSIFLMGCY-----DPGSQKWCTVTKCSGGHDDATLARLQTELD-MVKI 750
Query: 184 YEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA-PYSLRFPR 242
+ P + PS+ ++ N PD + P+K+ + IT +SEV +A S+RFPR
Sbjct: 751 SKDPSKI-PSWLKI--NKIYYPDFIVPDPKKAAVWEITG-AEFSKSEVHTADGISIRFPR 806
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSS 268
R+R DK W ++ EL S
Sbjct: 807 CTRIRDDKDWKSATNLPQLKELYQLS 832
>gi|396080968|gb|AFN82588.1| DNA ligase [Encephalitozoon romaleae SJ-2008]
Length = 589
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 93/190 (48%), Gaps = 22/190 (11%)
Query: 68 DEVEKFFKETIENRDEGIVLKDLGS--KWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGG 124
++ E FF ++E EG+++K LGS + P RS KW+K+K +Y+ SD LD++++G
Sbjct: 388 EDAEAFFNTSVEKGFEGMMVKTLGSDATYLPSQRSNKWIKIKKDYLEGMSDSLDLVVMGA 447
Query: 125 YYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKY 184
YYG G+R G FL+ + + +F + C++GTG D L + +L
Sbjct: 448 YYGKGKRAGFYGGFLLGVY-----NDEEEKFEALCKIGTGFDDNILSKLYEQLSSNL--- 499
Query: 185 EYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRSEVFSAPYSLRF 240
P Y + K PDVW+E+ ++ +S+ S I SLRF
Sbjct: 500 ----CGAPKNYSYKESIK--PDVWVEAKYVWEVRAAGMSL-SPIYNAGGSRNGKGISLRF 552
Query: 241 PRIDRVRYDK 250
PR R R DK
Sbjct: 553 PRFIRERDDK 562
>gi|395862645|ref|XP_003803550.1| PREDICTED: DNA ligase 1 [Otolemur garnettii]
Length = 898
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 102/198 (51%), Gaps = 21/198 (10%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEYIRA-GSDL 117
SL + +++ +F ++++++ EG+++K D+ + +E RS WLKLK +Y+ G L
Sbjct: 678 SLDTKDTEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDGVGDTL 737
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D+++IG Y G G+R G FL+A + D + C++GTG SDEEL+ KL
Sbjct: 738 DLVVIGAYLGRGKRAGRYGGFLLA-----SYDQDSEELQAICKLGTGFSDEELEEHYQKL 792
Query: 178 KPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRSEVFS 233
+ AP S+ ++ + PD W++ K LS++ R V S
Sbjct: 793 QDLVLP------APRSYVRI--DGAVAPDHWLDPSTVWEVKCGDLSLSPIYPAARGLVDS 844
Query: 234 AP-YSLRFPRIDRVRYDK 250
SLRFPR RVR DK
Sbjct: 845 EKGISLRFPRFIRVREDK 862
>gi|402906130|ref|XP_003915857.1| PREDICTED: DNA ligase 1 isoform 2 [Papio anubis]
Length = 851
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 111/237 (46%), Gaps = 30/237 (12%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEYIRA-GSDL 117
SL +V+++ +F ++++++ EG+++K D+ + +E RS WLKLK +Y+ G L
Sbjct: 630 SLDTKDVEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDGVGDTL 689
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D+++IG Y G G+R G FL+A + D + C++GTG SDEEL+ L
Sbjct: 690 DLVVIGAYLGRGKRAGRYGGFLLA-----SYDEDSEELQAICKLGTGFSDEELEEHHQSL 744
Query: 178 K----PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRS 229
K P R Y V + PD W++ K LS++ R
Sbjct: 745 KALVLPSPRPY------------VRIDGAVTPDHWLDPSAVWEVKCADLSLSPIYPAARG 792
Query: 230 EVFS-APYSLRFPRIDRVRYDK-PWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 284
V S SLRFPR RVR DK P Q S Q+G++ G +D
Sbjct: 793 LVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQSQIQNQQGEDSGSDPED 849
>gi|397486058|ref|XP_003814150.1| PREDICTED: DNA ligase 1 isoform 3 [Pan paniscus]
Length = 888
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 111/237 (46%), Gaps = 30/237 (12%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEYIRA-GSDL 117
SL +V+++ +F ++++++ EG+++K D+ + +E RS WLKLK +Y+ G L
Sbjct: 667 SLDTKDVEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDGVGDTL 726
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D+++IG Y G G+R G FL+A + D + C++GTG SDEEL+ L
Sbjct: 727 DLVVIGAYLGRGKRAGRYGGFLLA-----SYDEDSEELQAICKLGTGFSDEELEEHHQSL 781
Query: 178 K----PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRS 229
K P R Y V + PD W++ K LS++ R
Sbjct: 782 KALVLPSPRPY------------VRIDGAVIPDHWLDPSAVWEVKCADLSLSPIYPAARG 829
Query: 230 EVFS-APYSLRFPRIDRVRYDK-PWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 284
V S SLRFPR RVR DK P Q S Q+G++ G +D
Sbjct: 830 LVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQSQIQNQQGEDSGSDPED 886
>gi|325559200|gb|ADZ30576.1| DNA ligase [Cowpox virus]
Length = 554
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 101/205 (49%), Gaps = 15/205 (7%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLII 122
N ++ + + + EG+VLKD+ +EPG R +WLK+K +Y+ GS D++++
Sbjct: 362 NESQLTDVLDDALTRKLEGLVLKDINGVYEPGKR--RWLKIKRDYLNEGSMADSADLVVL 419
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
G YYG G +GG +A FL+ + ++ + ++ C +G D L + +LK +
Sbjct: 420 GAYYGKGAKGGIMAVFLMGCYD---DESGKWKTVTKC---SGHDDNTLRVLQDQLK-MIK 472
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
+ PK+ P + N PD +E P++S I I+ T + S+RFPR
Sbjct: 473 INKDPKKIPE---WLVVNKIYIPDFVVEDPKQSQIWEISGAEFTSSKSHTANGISIRFPR 529
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHS 267
R+R DK W + + V L S
Sbjct: 530 FTRIREDKTWKESTHLNDLVNLTKS 554
>gi|110761354|ref|XP_396537.3| PREDICTED: DNA ligase 3 [Apis mellifera]
Length = 1009
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 117/243 (48%), Gaps = 21/243 (8%)
Query: 35 VCVHVYMLSQLRSQIMAADQTGEPCWSLVA-----HNVDEVEKFFKETIENRDEGIVLKD 89
V +H M+ R QI+ + P +++ +N ++ K + + EG+VLKD
Sbjct: 519 VLLHKSMIE--RRQILTERMSEIPNRIMLSETEEIYNSQDLAKMIAKILNMGLEGLVLKD 576
Query: 90 LGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGGEVAQFLVALAERP 146
+ SK+EPG R WLK+K +Y+ G+ D++++G +YG+G +GG ++ FL+ +
Sbjct: 577 IHSKYEPGKRH--WLKVKKDYLYDGAMADSADLVVLGAWYGTGNKGGMMSVFLMGCYDED 634
Query: 147 APDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPD 206
+ +++ +V TG D L ++ +L + + P + P + N PD
Sbjct: 635 RDN-----WVTVTKVHTGHDDATLASLQDELD-MIKIGKNPTKVP---RWLRANKPMIPD 685
Query: 207 VWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVH 266
+ P+K + IT T + + S+RFPR+ R+R DK W + + L
Sbjct: 686 FVAKDPKKQPVWEITGAEFTNQGVHTADGISIRFPRVTRIRRDKDWSLAITLNELRNLFK 745
Query: 267 SSN 269
S+
Sbjct: 746 KSS 748
>gi|397486054|ref|XP_003814148.1| PREDICTED: DNA ligase 1 isoform 1 [Pan paniscus]
Length = 919
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 111/237 (46%), Gaps = 30/237 (12%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEYIRA-GSDL 117
SL +V+++ +F ++++++ EG+++K D+ + +E RS WLKLK +Y+ G L
Sbjct: 698 SLDTKDVEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDGVGDTL 757
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D+++IG Y G G+R G FL+A + D + C++GTG SDEEL+ L
Sbjct: 758 DLVVIGAYLGRGKRAGRYGGFLLA-----SYDEDSEELQAICKLGTGFSDEELEEHHQSL 812
Query: 178 K----PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRS 229
K P R Y V + PD W++ K LS++ R
Sbjct: 813 KALVLPSPRPY------------VRIDGAVIPDHWLDPSAVWEVKCADLSLSPIYPAARG 860
Query: 230 EVFS-APYSLRFPRIDRVRYDK-PWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 284
V S SLRFPR RVR DK P Q S Q+G++ G +D
Sbjct: 861 LVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQSQIQNQQGEDSGSDPED 917
>gi|325558126|gb|ADZ29507.1| DNA ligase [Cowpox virus]
Length = 552
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 101/205 (49%), Gaps = 15/205 (7%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLII 122
N ++ + + + EG+VLKD+ +EPG R +WLK+K +Y+ GS D++++
Sbjct: 360 NESQLTDVLDDALTRKLEGLVLKDINGVYEPGKR--RWLKIKRDYLNEGSMADSADLVVL 417
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
G YYG G +GG +A FL+ + ++ + ++ C +G D L + +LK +
Sbjct: 418 GAYYGKGAKGGIMAVFLMGCYD---DESGKWKTVTKC---SGHDDNTLRVLQDQLK-MIK 470
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
+ PK+ P + N PD +E P++S I I+ T + S+RFPR
Sbjct: 471 INKDPKKIPE---WLVVNKIYIPDFVVEDPKQSQIWEISGAEFTSSKSHTANGISIRFPR 527
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHS 267
R+R DK W + + V L S
Sbjct: 528 FTRIREDKTWKESTHLNDLVNLTKS 552
>gi|344269407|ref|XP_003406544.1| PREDICTED: DNA ligase 1 [Loxodonta africana]
Length = 917
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 105/228 (46%), Gaps = 30/228 (13%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEYIRA-GSDL 117
SL + D++ +F ++++ + EG+++K D+ + +E RS WLKLK +Y+ G L
Sbjct: 696 SLDTKDTDQIAEFLEQSVRDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLEGVGDTL 755
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELD----AV 173
D+++IG Y G G+R G FL+A D + C++GTG SDEEL+ ++
Sbjct: 756 DLVVIGAYLGRGKRAGRYGGFLLATY-----DKESEELQAICKLGTGFSDEELEKHHQSL 810
Query: 174 VTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRS 229
+ P R Y V + PD W+E K LS++ R
Sbjct: 811 QALVLPSPRSY------------VRADGAVAPDHWLEPSTVWEVKCADLSLSPIYPAARG 858
Query: 230 EV-FSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS-SNGTTQKG 275
V SLRFPR R+R DK + +L + S QKG
Sbjct: 859 LVDREKGISLRFPRFIRIRDDKKPEEATTSAQVAQLYQAQSQIQNQKG 906
>gi|426238631|ref|XP_004013253.1| PREDICTED: DNA ligase 3 [Ovis aries]
Length = 885
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 121/259 (46%), Gaps = 27/259 (10%)
Query: 67 VDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIG 123
VD + + +E +E G+VLKD+ +EPG R WLK+K +Y+ G+ D++++G
Sbjct: 645 VDMINRVIREGLE----GLVLKDVKGTYEPGKRH--WLKVKKDYLNEGAMADTADLVVLG 698
Query: 124 GYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRK 183
+YG G +GG ++ FL+ D +++ + + G D L + T+L +
Sbjct: 699 AFYGQGSKGGMMSIFLMGCF-----DPSSQKWCTVTKCAGGHDDATLARLQTELD-MVKI 752
Query: 184 YEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA-PYSLRFPR 242
+ P + P ++ ++ N PD + P+K+ + IT +SE +A S+RFPR
Sbjct: 753 SKDPSKIP-NWLKI--NKIYYPDFIVPDPKKAAVWEITG-AEFSKSEAHTADGISIRFPR 808
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSI 302
R+R DK W ++ EL S K G L D KP R K +K +
Sbjct: 809 CTRIRDDKDWKSATNLPQLKELYQLS-----KESRGGNLPDAKPSPVRVGVK--RKAPDV 861
Query: 303 VPSHFLQTDVSDIKGETSI 321
P + S +G ++
Sbjct: 862 TPCQAKRRPASKQRGRRAV 880
>gi|325559413|gb|ADZ30788.1| DNA ligase [Cowpox virus]
Length = 554
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 101/205 (49%), Gaps = 15/205 (7%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLII 122
N ++ + + + EG+VLKD+ +EPG R +WLK+K +Y+ GS D++++
Sbjct: 362 NESQLTDVLDDALTRKLEGLVLKDINGVYEPGKR--RWLKIKRDYLNEGSMADSADLVVL 419
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
G YYG G +GG +A FL+ + ++ + ++ C +G D L + +LK +
Sbjct: 420 GAYYGKGAKGGIMAVFLMGCYD---DESGKWKTVTKC---SGHDDNTLRVLQDQLK-MIK 472
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
+ PK+ P + N PD +E P++S I I+ T + S+RFPR
Sbjct: 473 INKDPKKIPE---WLVVNKIYIPDFVVEDPKQSQIWEISGAEFTSSKSHTANGISIRFPR 529
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHS 267
R+R DK W + + V L S
Sbjct: 530 FTRIREDKTWKESTHLNDLVNLTKS 554
>gi|307201128|gb|EFN81039.1| DNA ligase 4 [Harpegnathos saltator]
Length = 806
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 87/381 (22%), Positives = 161/381 (42%), Gaps = 41/381 (10%)
Query: 42 LSQLRSQIMAADQTGEPCWSLVAHNVDEVEKFFK-ETIENRDEGIVLKDLGSKWEPGDR- 99
L QL + ++ A C + + ++E F+ + ++ ++EGIV+K ++P R
Sbjct: 377 LKQLENLLIKAHGAISACETTPIDDRTQLEDIFRSKCLQGKEEGIVVKRHDFLYKPNVRD 436
Query: 100 SGKWLKLKPEYI-RAGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAP--DTYPRRFI 156
G K+K EY DLD++I+GG Y + ++ ++ A PA + +P F+
Sbjct: 437 GGGCYKIKAEYSDNLVQDLDLIILGGSYTKNKFPKQLNSLIMG-AAIPASSEEEHPSSFM 495
Query: 157 SFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSI 216
V GLS EE + + + ++ + P + +T ++ + D+W+ PE S+
Sbjct: 496 VIVSVSNGLSKEEWNFLEERFSS-----KWVEECPENI--LTYATRTQSDMWLR-PEDSM 547
Query: 217 ILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGK 276
IL+I + + S YS RFPR+ +R DKPW+ + + LV + + K
Sbjct: 548 ILTIRAT-EMVPSNKHLIGYSFRFPRVMHIRQDKPWYSACTNKEILSLVKNKKAIHKLIK 606
Query: 277 ------------EYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSD 324
E G DKP+ G+ +V+ T +
Sbjct: 607 PEANLHNNEDLLELSGCTSDKPRILTRPWSGQIAHVAFEKPVI----------HTRLLEG 656
Query: 325 MVFYFVNVPPAYSLDSLHKMVVENGGTFSMNLNNSVTHC--VAADNKGLKYEAAKRRGDV 382
+N +S + + K+++++ N S T+C V +N + K +V
Sbjct: 657 KEICVINGTDDFSKEDIEKVLMQHSANIVSN-PISTTYCTIVGKNNTIRALDVIKNHDNV 715
Query: 383 IHYSWVLDCCS-QKKLLQLQP 402
+ + W L S QK + + P
Sbjct: 716 VSFDWFLRVTSDQKSSISIHP 736
>gi|20178549|ref|NP_619970.1| CPXV188 protein [Cowpox virus]
gi|20153167|gb|AAM13628.1|AF482758_179 CPXV188 protein [Cowpox virus]
Length = 554
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 101/205 (49%), Gaps = 15/205 (7%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLII 122
N ++ + + + EG+VLKD+ +EPG R +WLK+K +Y+ GS D++++
Sbjct: 362 NESQLTDVLDDALTRKLEGLVLKDINGVYEPGKR--RWLKIKRDYLNEGSMADSADLVVL 419
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
G YYG G +GG +A FL+ + ++ + ++ C +G D L + +LK +
Sbjct: 420 GAYYGKGAKGGIMAVFLMGCYD---DESGKWKTVTKC---SGHDDNTLRVLQDQLK-MIK 472
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
+ PK+ P + N PD +E P++S I I+ T + S+RFPR
Sbjct: 473 INKDPKKIPE---WLVVNKIYIPDFVVEDPKQSQIWEISGAEFTSSKSHTANGISIRFPR 529
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHS 267
R+R DK W + + V L S
Sbjct: 530 FTRIREDKTWKESTHLNDLVNLTKS 554
>gi|90079511|dbj|BAE89435.1| unnamed protein product [Macaca fascicularis]
Length = 612
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 98/198 (49%), Gaps = 21/198 (10%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEYIRA-GSDL 117
SL +V+++ +F ++++++ EG+++K D+ + +E RS WLKLK +Y+ G L
Sbjct: 391 SLDTKDVEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDGVGDTL 450
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D+++IG Y G G+R G FL+A + D + C++GTG SDEEL+ L
Sbjct: 451 DLVVIGAYLGRGKRAGRYGGFLLA-----SYDEDSEELQAICKLGTGFSDEELEEHHQSL 505
Query: 178 KPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRSEVFS 233
K P V + PD W++ K LS++ R V S
Sbjct: 506 KALVLPSPRP--------YVRIDGAVTPDHWLDPSAVWEVKCADLSLSPIYPAARGLVDS 557
Query: 234 -APYSLRFPRIDRVRYDK 250
SLRFPR RVR DK
Sbjct: 558 DKGISLRFPRFIRVREDK 575
>gi|22164754|ref|NP_671667.1| EVM148 [Ectromelia virus]
gi|22123895|gb|AAM92453.1|AF523264_149 EVM148 [Ectromelia virus]
gi|383866874|gb|AFH54717.1| DNA ligase [Ectromelia virus]
Length = 554
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 101/205 (49%), Gaps = 15/205 (7%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLII 122
N ++ + + + EG+VLKD+ +EPG R +WLK+K +Y+ GS D++++
Sbjct: 362 NESQLTDVLDDALTRKLEGLVLKDINGVYEPGKR--RWLKIKRDYLNEGSMADSADLVVL 419
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
G YYG G +GG +A FL+ + ++ + ++ C +G D L + +LK +
Sbjct: 420 GAYYGKGAKGGIMAVFLMGCYD---DESGKWKTVTKC---SGHDDNTLRVLQDQLK-MVK 472
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
+ PK+ P + N PD +E P++S I I+ T + S+RFPR
Sbjct: 473 INKDPKKIP---VWLVVNKIYIPDFVVEDPKQSQIWEISGAEFTSSKSHTANGISIRFPR 529
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHS 267
R+R DK W + + V L S
Sbjct: 530 FTRIREDKTWKESTHLNDLVNLTKS 554
>gi|352683054|ref|YP_004893578.1| DNA ligase [Thermoproteus tenax Kra 1]
gi|350275853|emb|CCC82500.1| DNA ligase [Thermoproteus tenax Kra 1]
Length = 592
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 109/232 (46%), Gaps = 41/232 (17%)
Query: 60 WSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LD 118
W+L + ++V+ FF E I EG+V K S +E G R W+K K +Y SD +D
Sbjct: 382 WALF-DDEEKVDLFFHEAISMGMEGLVCKSPTSLYEMGARGWNWIKYKRDYRSEMSDTVD 440
Query: 119 VLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLK 178
++++G +YG G+R G FL+A A P D F + C+VG+G +D +L + L+
Sbjct: 441 LVVVGAFYGRGKRAGLYGAFLMA-AYDPKTDM----FYTVCKVGSGFTDADLKKMYQMLE 495
Query: 179 PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP--- 235
PY + +P+ +S+ PDVW +P I+L I I +E+ +P
Sbjct: 496 PYKIDHRHPR----------VSSRMEPDVWF-TP--GIVLEI------IGAEITLSPLHT 536
Query: 236 -----------YSLRFPRI-DRVRYDKPWHDCLDVQSFVELVHSSNGTTQKG 275
++RFPR R R DK + V +E+ + +G
Sbjct: 537 CCQGAIKPDVGLAIRFPRFTGRYRSDKGPEEATTVDELLEIYRNQKKVKLEG 588
>gi|348551158|ref|XP_003461397.1| PREDICTED: DNA ligase 1-like [Cavia porcellus]
Length = 919
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 100/202 (49%), Gaps = 29/202 (14%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEYIRA-GSDL 117
SL +++++ +F ++++++ EG+++K D+ + +E RS WLKLK +Y+ G L
Sbjct: 699 SLDTKDMEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDGVGDTL 758
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D+++IG Y G G+R G FL+A A D + C++GTG SDE+L+ L
Sbjct: 759 DLVVIGAYLGRGKRAGRYGGFLLA-----AYDEESEELQAICKLGTGFSDEQLEEHYQSL 813
Query: 178 K----PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRS 229
+ P R Y V + PD W++ K LS++ R
Sbjct: 814 QALVLPTPRPY------------VRADGAVAPDHWLDPSAVWEVKCADLSLSPIYPAARG 861
Query: 230 EVFSAP-YSLRFPRIDRVRYDK 250
V S SLRFPR RVR DK
Sbjct: 862 LVDSEKGISLRFPRFIRVREDK 883
>gi|401825510|ref|XP_003886850.1| DNA ligase [Encephalitozoon hellem ATCC 50504]
gi|392998006|gb|AFM97869.1| DNA ligase [Encephalitozoon hellem ATCC 50504]
Length = 589
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 95/190 (50%), Gaps = 22/190 (11%)
Query: 68 DEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGG 124
++ E FF ++E EGI++K LG + + P RS KW+K+K +Y+ + SD LD++++G
Sbjct: 388 EDAETFFSTSVEKGFEGIMVKTLGPDTTYLPSQRSNKWIKIKKDYLESMSDSLDLVVMGA 447
Query: 125 YYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKY 184
YYG G+R G FL+ + + +F + C++GTG D L + +L
Sbjct: 448 YYGKGKRTGFYGGFLLGVY-----NDEEEKFEALCKIGTGFDDSILSKLYEQLSSNL--- 499
Query: 185 EYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRSEVFSAPYSLRF 240
+ P Y + K PDVW+E+ ++ +S+ S I SLRF
Sbjct: 500 ----CSAPKNYSYKESVK--PDVWVEAKYVWEVRAAGMSL-SPIYNAGGSRNGKGISLRF 552
Query: 241 PRIDRVRYDK 250
PR R R DK
Sbjct: 553 PRFIRERDDK 562
>gi|397486056|ref|XP_003814149.1| PREDICTED: DNA ligase 1 isoform 2 [Pan paniscus]
Length = 851
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 111/237 (46%), Gaps = 30/237 (12%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEYIRA-GSDL 117
SL +V+++ +F ++++++ EG+++K D+ + +E RS WLKLK +Y+ G L
Sbjct: 630 SLDTKDVEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDGVGDTL 689
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D+++IG Y G G+R G FL+A + D + C++GTG SDEEL+ L
Sbjct: 690 DLVVIGAYLGRGKRAGRYGGFLLA-----SYDEDSEELQAICKLGTGFSDEELEEHHQSL 744
Query: 178 K----PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRS 229
K P R Y V + PD W++ K LS++ R
Sbjct: 745 KALVLPSPRPY------------VRIDGAVIPDHWLDPSAVWEVKCADLSLSPIYPAARG 792
Query: 230 EVFS-APYSLRFPRIDRVRYDK-PWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 284
V S SLRFPR RVR DK P Q S Q+G++ G +D
Sbjct: 793 LVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQSQIQNQQGEDSGSDPED 849
>gi|6969850|gb|AAF34062.1| TA61R [Vaccinia virus Tian Tan]
Length = 552
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 101/205 (49%), Gaps = 15/205 (7%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLII 122
N ++ + + + EG+VLKD+ +EPG R +WLK+K +Y+ GS D++++
Sbjct: 360 NESQLTDVLDDALTRKLEGLVLKDINGVYEPGKR--RWLKIKRDYLNEGSMADSADLVVL 417
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
G YYG G +GG +A FL+ + ++ + ++ C +G D L + +LK +
Sbjct: 418 GAYYGKGAKGGIMAVFLMGCYD---DESGKWKTVTKC---SGHDDNTLRVLQDQLK-MIK 470
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
+ PK+ P + N PD +E P++S I I+ T + S+RFPR
Sbjct: 471 INKDPKKIPE---WLVVNKIYIPDFVVEDPKQSQIWEISGAEFTSSKSHTANGISIRFPR 527
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHS 267
R+R DK W + + V L S
Sbjct: 528 FTRIREDKTWKESTHLNDLVNLTKS 552
>gi|4557719|ref|NP_000225.1| DNA ligase 1 [Homo sapiens]
gi|118773|sp|P18858.1|DNLI1_HUMAN RecName: Full=DNA ligase 1; AltName: Full=DNA ligase I; AltName:
Full=Polydeoxyribonucleotide synthase [ATP] 1
gi|21780372|gb|AAM77697.1|AF527418_1 ligase I, DNA, ATP-dependent [Homo sapiens]
gi|187143|gb|AAA59518.1| DNA ligase I [Homo sapiens]
gi|80474360|gb|AAI08319.1| Ligase I, DNA, ATP-dependent [Homo sapiens]
gi|119572701|gb|EAW52316.1| ligase I, DNA, ATP-dependent, isoform CRA_a [Homo sapiens]
gi|189054890|dbj|BAG36885.1| unnamed protein product [Homo sapiens]
Length = 919
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 111/237 (46%), Gaps = 30/237 (12%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEYIRA-GSDL 117
SL +++++ +F ++++++ EG+++K D+ + +E RS WLKLK +Y+ G L
Sbjct: 698 SLDTKDIEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDGVGDTL 757
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D+++IG Y G G+R G FL+A + D + C++GTG SDEEL+ L
Sbjct: 758 DLVVIGAYLGRGKRAGRYGGFLLA-----SYDEDSEELQAICKLGTGFSDEELEEHHQSL 812
Query: 178 K----PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRS 229
K P R Y V + PD W++ K LS++ R
Sbjct: 813 KALVLPSPRPY------------VRIDGAVIPDHWLDPSAVWEVKCADLSLSPIYPAARG 860
Query: 230 EVFS-APYSLRFPRIDRVRYDK-PWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 284
V S SLRFPR RVR DK P Q S Q+G++ G +D
Sbjct: 861 LVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQSQIQNQQGEDSGSDPED 917
>gi|47506906|gb|AAH70993.1| LOC398275 protein [Xenopus laevis]
Length = 933
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 121/288 (42%), Gaps = 35/288 (12%)
Query: 41 MLSQLRSQIMAADQTGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRS 100
M S+++ AAD D + + +E +E G+VLKD+ S +EPG R
Sbjct: 536 MFSEMKHVTKAADL------------ADMITRVIREGLE----GLVLKDIKSNYEPGKRH 579
Query: 101 GKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFIS 157
WLK+K +Y+ G+ D+ ++G YYG G GG ++ FL+ D + + +
Sbjct: 580 --WLKVKKDYLNEGAMADTADLAVLGAYYGKGANGGIMSIFLMGCY-----DPEGQHWCT 632
Query: 158 FCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSII 217
+ +G D L + +L K PS+ ++ N PD I+ P+K+ I
Sbjct: 633 VTKCSSGYDDATLQRLQKELN--MVKISKDPSKIPSWLKINKNY--FPDFIIQDPKKAPI 688
Query: 218 LSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKE 277
IT + + S+RFPR R R DK W +Q EL S +
Sbjct: 689 WEITGAEYSKAEAHTAGGLSIRFPRCTRFRDDKDWKTATTLQQLKELYRLSKEKSDFNIT 748
Query: 278 YGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQT-----DVSDIKGETS 320
QD+ SSR+ E + ++T S KG+TS
Sbjct: 749 ATSSQDEDGSSECSSRENEGNSTQTSSGSLVKTIKNVPSKSPAKGKTS 796
>gi|429856550|gb|ELA31455.1| DNA ligase [Colletotrichum gloeosporioides Nara gc5]
Length = 901
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 111/230 (48%), Gaps = 27/230 (11%)
Query: 60 WSLVAH----NVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIR 112
++L H ++++++F E+++ EG+++K L S +EP RS WLK+K +Y+
Sbjct: 671 FALATHMNGQELEQIQEFLDESVKASCEGLMVKMLDGSESGYEPSKRSRNWLKIKKDYLS 730
Query: 113 A-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELD 171
G LD++++G Y+G G+R FL+A P+ D+Y + C +GTG S+ L+
Sbjct: 731 GIGDSLDLVVLGAYHGKGKRTSVYGAFLLA-CYNPSSDSYE----TVCNIGTGFSEAVLE 785
Query: 172 AVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIES----PEKSIILSITSDIRTI 227
+ +L + PK FY ++ + +PDVW E K+ L+++ +
Sbjct: 786 ELHKQLSDIV--IDLPK----PFYAHSSGGQHQPDVWFEPRYVWEVKTADLTLSPRYKAG 839
Query: 228 RSEVFSAP----YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQ 273
E SLRFPR +VR DK + + E+ T+
Sbjct: 840 CKEGVDPAGEKGISLRFPRFIKVRDDKKPDEATSSRQVAEMYRKQESVTR 889
>gi|194390694|dbj|BAG62106.1| unnamed protein product [Homo sapiens]
Length = 888
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 111/237 (46%), Gaps = 30/237 (12%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEYIRA-GSDL 117
SL +++++ +F ++++++ EG+++K D+ + +E RS WLKLK +Y+ G L
Sbjct: 667 SLDTKDIEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDGVGDTL 726
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D+++IG Y G G+R G FL+A + D + C++GTG SDEEL+ L
Sbjct: 727 DLVVIGAYLGRGKRAGRYGGFLLA-----SYDEDSEELQAICKLGTGFSDEELEEHHQSL 781
Query: 178 K----PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRS 229
K P R Y V + PD W++ K LS++ R
Sbjct: 782 KALVLPSPRPY------------VRIDGAVIPDHWLDPSAVWEVKCADLSLSPIYPAARG 829
Query: 230 EVFS-APYSLRFPRIDRVRYDK-PWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 284
V S SLRFPR RVR DK P Q S Q+G++ G +D
Sbjct: 830 LVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQSQIQNQQGEDSGSDPED 886
>gi|119572702|gb|EAW52317.1| ligase I, DNA, ATP-dependent, isoform CRA_b [Homo sapiens]
Length = 889
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 111/237 (46%), Gaps = 30/237 (12%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEYIRA-GSDL 117
SL +++++ +F ++++++ EG+++K D+ + +E RS WLKLK +Y+ G L
Sbjct: 668 SLDTKDIEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDGVGDTL 727
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D+++IG Y G G+R G FL+A + D + C++GTG SDEEL+ L
Sbjct: 728 DLVVIGAYLGRGKRAGRYGGFLLA-----SYDEDSEELQAICKLGTGFSDEELEEHHQSL 782
Query: 178 K----PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRS 229
K P R Y V + PD W++ K LS++ R
Sbjct: 783 KALVLPSPRPY------------VRIDGAVIPDHWLDPSAVWEVKCADLSLSPIYPAARG 830
Query: 230 EVFS-APYSLRFPRIDRVRYDK-PWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 284
V S SLRFPR RVR DK P Q S Q+G++ G +D
Sbjct: 831 LVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQSQIQNQQGEDSGSDPED 887
>gi|448472766|ref|ZP_21601298.1| DNA ligase I, ATP-dependent Dnl1 [Halorubrum aidingense JCM 13560]
gi|445819674|gb|EMA69513.1| DNA ligase I, ATP-dependent Dnl1 [Halorubrum aidingense JCM 13560]
Length = 646
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 90/193 (46%), Gaps = 30/193 (15%)
Query: 63 VAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVLII 122
VA + D +E E ++ EG++LK+ S + PG+R WLK KP+ LD +++
Sbjct: 462 VADSPDAIESAEAEALDAGHEGVMLKNPESTYTPGNRGRDWLKRKPDV----ETLDAVVV 517
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
G +G GRR FL+ + A D F + +V TGL+DE L+A+ +L+P+
Sbjct: 518 GAEWGEGRRAELFGTFLLGVRNEAAGDA----FRTIGKVATGLTDEALEALTDRLEPHV- 572
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
+ RP+V IE + I S T +S+ Y+LRFPR
Sbjct: 573 -----------VSETGTEITIRPEVVIEVGYEEIQSSPT----------YSSGYALRFPR 611
Query: 243 IDRVRYDKPWHDC 255
VR DK D
Sbjct: 612 FVGVREDKAIADA 624
>gi|119719660|ref|YP_920155.1| ATP-dependent DNA ligase [Thermofilum pendens Hrk 5]
gi|224487899|sp|A1RY72.1|DNLI2_THEPD RecName: Full=DNA ligase 2; AltName: Full=Polydeoxyribonucleotide
synthase [ATP] 2
gi|119524780|gb|ABL78152.1| DNA ligase I, ATP-dependent Dnl1 [Thermofilum pendens Hrk 5]
Length = 601
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 101/214 (47%), Gaps = 14/214 (6%)
Query: 63 VAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRAGSD-LDV 119
V + ++ FF++ I EG++ K +G S ++ G R W+K K +Y +D +D+
Sbjct: 394 VVGDAKDLLHFFEQAISEGCEGVMCKSIGPGSIYQMGARGWLWIKFKRDYRMEMTDTVDL 453
Query: 120 LIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 179
+++GG++G G+R G L+A A P DT F + C+VGTG +DE+L KL
Sbjct: 454 VVVGGFHGRGKRAGTYGALLMA-AYDPETDT----FKTVCKVGTGFTDEDL----AKLPE 504
Query: 180 YFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLR 239
Y+ P R P F ++ + P V +E I LS + E A ++R
Sbjct: 505 LLDPYKIPHRHPRVFSKIEADVWFVPAVVLEIIGAEITLSPLHTCALNKLEE-GAGLAIR 563
Query: 240 FPRI-DRVRYDKPWHDCLDVQSFVELVHSSNGTT 272
FPR R R+DK +E+ S T
Sbjct: 564 FPRFTGRYRFDKKPEQATTESELIEMYKSQKKTA 597
>gi|84617165|emb|CAH64534.1| DNA ligase (ATP) [Ferroplasma acidiphilum]
Length = 595
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 108/215 (50%), Gaps = 31/215 (14%)
Query: 62 LVAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRAGSD-LD 118
L + + +E+ KFF+++IE+ EGIV KD S + G R W+K K +Y + +D +D
Sbjct: 392 LSSDDSEEINKFFEQSIEDGCEGIVAKDTSDESVYRAGARGWLWIKFKRDYQKELADSMD 451
Query: 119 VLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLK 178
++IIG + G GRR G L+A + + F S ++GTG SDE L ++ L
Sbjct: 452 LVIIGAFNGRGRRAGAYGALLMA-----SYNEETHAFESVTKLGTGFSDEVLFSLPKMLS 506
Query: 179 PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSI------TSDIRTI---RS 229
R ++ P+ + SK PD+WI P+ I++ I S I T +
Sbjct: 507 DLVRDHK------PAMVE----SKMVPDIWI-YPQ--IVMEIQGAEITVSPIHTCAFGKI 553
Query: 230 EVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
E S P +LRFPR+ ++R DK D +EL
Sbjct: 554 EKDSGP-ALRFPRLIKIRDDKNAEDATTTNEIIEL 587
>gi|88854250|gb|ABD52668.1| ATP-dependent DNA ligase [Vaccinia virus]
Length = 552
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 101/205 (49%), Gaps = 15/205 (7%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLII 122
N ++ + + + EG+VLKD+ +EPG R +WLK+K +Y+ GS D++++
Sbjct: 360 NESQLTDVLDDALTRKLEGLVLKDINGVYEPGKR--RWLKIKRDYLNEGSMADSADLVVL 417
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
G YYG G +GG +A FL+ + ++ + ++ C +G D L + +LK +
Sbjct: 418 GAYYGKGAKGGIMAVFLMGCYD---DESGKWKTVTKC---SGHDDNTLRELQDQLK-MIK 470
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
+ PK+ P + N PD +E P++S I I+ T + S+RFPR
Sbjct: 471 INKDPKKIPE---WLVVNKIYIPDFVVEDPKQSQIWEISGAEFTSSKSHTANGISIRFPR 527
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHS 267
R+R DK W + + V L S
Sbjct: 528 FTRIREDKTWKESTHLNDLVNLTKS 552
>gi|439966019|gb|AGB75893.1| ATP-dependent DNA ligase [Vaccinia virus]
Length = 552
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 101/205 (49%), Gaps = 15/205 (7%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLII 122
N ++ + + + EG+VLKD+ +EPG R +WLK+K +Y+ GS D++++
Sbjct: 360 NESQLTDVLDDALTRKLEGLVLKDINGVYEPGKR--RWLKIKRDYLNEGSMADSADLVVL 417
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
G YYG G +GG +A FL+ + ++ + ++ C +G D L + +LK +
Sbjct: 418 GAYYGKGAKGGIMAVFLMGCYD---DESGKWKTVTKC---SGHDDNTLRELQDQLK-MIK 470
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
+ PK+ P + N PD +E P++S I I+ T + S+RFPR
Sbjct: 471 INKDPKKIPE---WLVVNKIYIPDFVVEDPKQSQIWEISGAEFTSSKSHTANGISIRFPR 527
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHS 267
R+R DK W + + V L S
Sbjct: 528 FTRIREDKTWKESTHLNDLVNLTKS 552
>gi|160858060|emb|CAM58348.1| ATP-dependent DNA ligase [Vaccinia virus Ankara]
Length = 552
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 101/205 (49%), Gaps = 15/205 (7%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLII 122
N ++ + + + EG+VLKD+ +EPG R +WLK+K +Y+ GS D++++
Sbjct: 360 NESQLTDVLDDALTRKLEGLVLKDINGVYEPGKR--RWLKIKRDYLNEGSMADSADLVVL 417
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
G YYG G +GG +A FL+ + ++ + ++ C +G D L + +LK +
Sbjct: 418 GAYYGKGAKGGIMAVFLMGCYD---DESGKWKTVTKC---SGHDDNTLRELQDQLK-MIK 470
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
+ PK+ P + N PD +E P++S I I+ T + S+RFPR
Sbjct: 471 INKDPKKIPE---WLVVNKIYIPDFVVEDPKQSQIWEISGAEFTSSKSHTANGISIRFPR 527
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHS 267
R+R DK W + + V L S
Sbjct: 528 FTRIREDKTWKESTHLNDLVNLTKS 552
>gi|56404443|sp|O57250.1|DNLI_VACCA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|2772802|gb|AAB96541.1| DNA ligase [Vaccinia virus]
gi|47088491|gb|AAT10561.1| DNA ligase [Vaccinia virus]
Length = 552
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 101/205 (49%), Gaps = 15/205 (7%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLII 122
N ++ + + + EG+VLKD+ +EPG R +WLK+K +Y+ GS D++++
Sbjct: 360 NESQLTDVLDDALTRKLEGLVLKDINGVYEPGKR--RWLKIKRDYLNEGSMADSADLVVL 417
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
G YYG G +GG +A FL+ + ++ + ++ C +G D L + +LK +
Sbjct: 418 GAYYGKGAKGGIMAVFLMGCYD---DESGKWKTVTKC---SGHDDNTLRELQDQLK-MIK 470
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
+ PK+ P + N PD +E P++S I I+ T + S+RFPR
Sbjct: 471 INKDPKKIPE---WLVVNKIYIPDFVVEDPKQSQIWEISGAEFTSSKSHTANGISIRFPR 527
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHS 267
R+R DK W + + V L S
Sbjct: 528 FTRIREDKTWKESTHLNDLVNLTKS 552
>gi|408440830|ref|NP_001025345.2| DNA ligase 3 [Danio rerio]
Length = 1011
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 93/190 (48%), Gaps = 16/190 (8%)
Query: 83 EGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGGEVAQFL 139
EG+VLKD+ +EPG R WLK+K +Y+ G+ D++++G +YG G GG ++ FL
Sbjct: 654 EGLVLKDIKGLYEPGKRH--WLKVKKDYLNEGAMADTADLVVLGAFYGKGSNGGIMSSFL 711
Query: 140 VALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTN 199
+ D R++ + + G D LD + L + + P + P V N
Sbjct: 712 MGCY-----DPESRKWCTVTKCSGGFDDAMLDRLQKDLD-VIKIGKDPSKIPGWLKIVKN 765
Query: 200 NSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA-PYSLRFPRIDRVRYDKPWHDCLDV 258
PD I P+K+ + IT +SE+ +A S+RFPR R+R DK W ++
Sbjct: 766 Y---YPDFIIRDPQKAPVWEITG-AEFSKSEMHTADGISIRFPRCTRMRDDKDWKTATNL 821
Query: 259 QSFVELVHSS 268
Q EL S
Sbjct: 822 QQLKELYRIS 831
>gi|307184383|gb|EFN70797.1| DNA ligase 3 [Camponotus floridanus]
Length = 925
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 102/215 (47%), Gaps = 14/215 (6%)
Query: 83 EGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGGEVAQFL 139
EG+VLKD+ SK+EPG R WLK+K +Y+ G+ D++++G +YG+G +GG ++ FL
Sbjct: 562 EGLVLKDIDSKYEPGKRH--WLKVKKDYLCGGAMADSADLVVLGAWYGTGNKGGMLSIFL 619
Query: 140 VALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTN 199
+ D ++++ +V TG D L A+ +L + K PS+ +
Sbjct: 620 MGCY-----DEERDKWLTVTKVHTGHDDTTLTALQDELDMVKIGKDVDKL--PSW--LLA 670
Query: 200 NSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQ 259
PD P+K + IT T + + S+RFPR+ R+R+DK W +
Sbjct: 671 KKPMVPDFVARDPKKQPVWEITGAEFTNQGVHTADGISIRFPRVTRIRHDKDWSTATSLN 730
Query: 260 SFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRK 294
L + G L D K + +S RK
Sbjct: 731 ELRGLFKKKPDSVDFSHLLGTLADVKDTEKKSPRK 765
>gi|111184361|gb|ABH08281.1| HSPV172 [Horsepox virus]
Length = 552
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 101/205 (49%), Gaps = 15/205 (7%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLII 122
N ++ + + + EG+VLKD+ +EPG R +WLK+K +Y+ GS D++++
Sbjct: 360 NESQLTDVLDDALTRKLEGLVLKDINGVYEPGKR--RWLKIKRDYLNEGSMADSADLVVL 417
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
G YYG G +GG +A FL+ + ++ + ++ C +G D L + +LK +
Sbjct: 418 GAYYGKGAKGGIMAVFLMGCYD---DESGKWKTVTKC---SGHDDNTLRKLQDQLK-MIK 470
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
+ PK+ P + N PD +E P++S I I+ T + S+RFPR
Sbjct: 471 INKDPKKIPE---WLVVNKIYIPDFVVEDPKQSQIWEISGAEFTSSKSHTANGISIRFPR 527
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHS 267
R+R DK W + + V L S
Sbjct: 528 FTRIREDKTWKESTHLNDLVNLTKS 552
>gi|167412705|gb|ABZ80139.1| DNA ligase [Vaccinia virus GLV-1h68]
Length = 552
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 101/205 (49%), Gaps = 15/205 (7%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLII 122
N ++ + + + EG+VLKD+ +EPG R +WLK+K +Y+ GS D++++
Sbjct: 360 NESQLTDVLDDALTRKLEGLVLKDINGVYEPGKR--RWLKIKRDYLNEGSMADSADLVVL 417
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
G YYG G +GG +A FL+ + ++ + ++ C +G D L + +LK +
Sbjct: 418 GAYYGKGAKGGIMAVFLMGCYD---DESGKWKTVTKC---SGHDDNTLRELQDQLK-MIK 470
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
+ PK+ P + N PD +E P++S I I+ T + S+RFPR
Sbjct: 471 INKDPKKIPE---WLVVNKIYIPDFVVEDPKQSQIWEISGAEFTSSKSHTANGISIRFPR 527
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHS 267
R+R DK W + + V L S
Sbjct: 528 FTRIREDKTWKESTHLNDLVNLTKS 552
>gi|194386400|dbj|BAG59764.1| unnamed protein product [Homo sapiens]
Length = 851
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 111/237 (46%), Gaps = 30/237 (12%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEYIRA-GSDL 117
SL +++++ +F ++++++ EG+++K D+ + +E RS WLKLK +Y+ G L
Sbjct: 630 SLDTKDIEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDGVGDTL 689
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D+++IG Y G G+R G FL+A + D + C++GTG SDEEL+ L
Sbjct: 690 DLVVIGAYLGRGKRAGRYGGFLLA-----SYDEDSEELQAICKLGTGFSDEELEEHHQSL 744
Query: 178 K----PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRS 229
K P R Y V + PD W++ K LS++ R
Sbjct: 745 KALVLPSPRPY------------VRIDGAVIPDHWLDPSAVWEVKCADLSLSPIYPAARG 792
Query: 230 EVFS-APYSLRFPRIDRVRYDK-PWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 284
V S SLRFPR RVR DK P Q S Q+G++ G +D
Sbjct: 793 LVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQSQIQNQQGEDSGSDPED 849
>gi|257076027|ref|ZP_05570388.1| ATP-dependent DNA ligase [Ferroplasma acidarmanus fer1]
Length = 595
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 106/214 (49%), Gaps = 29/214 (13%)
Query: 62 LVAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRAGSD-LD 118
L + + +E+ KFF+++IE+ EGIV KD S + G R W+K K +Y + +D +D
Sbjct: 392 LSSDDSEEINKFFEQSIEDGCEGIVAKDTSDESVYRAGARGWLWIKFKRDYQKELADSMD 451
Query: 119 VLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLK 178
++IIG + G GRR G L+A + + F S ++GTG SDE L ++ L
Sbjct: 452 LVIIGAFNGRGRRAGAYGALLMA-----SYNEETHAFESVTKLGTGFSDEVLFSLPKMLS 506
Query: 179 PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITS---DIRTIRSEVFS-- 233
R ++ P+ + SK PD+WI P+ I++ I + I + F
Sbjct: 507 DLVRDHK------PAMVE----SKMVPDIWI-YPQ--IVMEIQGAEITVSPIHTCAFGKI 553
Query: 234 ---APYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
+ +LRFPR+ ++R DK D +EL
Sbjct: 554 EKDSGLALRFPRLIKIRDDKNAEDATTTNEIIEL 587
>gi|56713572|gb|AAW23612.1| ATP-dependent DNA ligase [Vaccinia virus]
gi|56713856|gb|AAW23894.1| ATP-dependent DNA ligase [Vaccinia virus]
Length = 552
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 101/205 (49%), Gaps = 15/205 (7%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLII 122
N ++ + + + EG+VLKD+ +EPG R +WLK+K +Y+ GS D++++
Sbjct: 360 NESQLTDVLDDALTRKLEGLVLKDINGVYEPGKR--RWLKIKRDYLNEGSMADSADLVVL 417
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
G YYG G +GG +A FL+ + ++ + ++ C +G D L + +LK +
Sbjct: 418 GAYYGKGAKGGIMAVFLMGCYD---DESGKWKTVTKC---SGHDDNTLRELQDQLK-MIK 470
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
+ PK+ P + N PD +E P++S I I+ T + S+RFPR
Sbjct: 471 INKDPKKIPE---WLVVNKIYIPDFVVEDPKQSQIWEISGAEFTSSKSHTANGISIRFPR 527
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHS 267
R+R DK W + + V L S
Sbjct: 528 FTRIREDKTWKESTHLNDLVNLTKS 552
>gi|373447602|gb|AEY72987.1| DNA ligase [Vaccinia virus]
Length = 552
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 101/205 (49%), Gaps = 15/205 (7%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLII 122
N ++ + + + EG+VLKD+ +EPG R +WLK+K +Y+ GS D++++
Sbjct: 360 NESQLTDVLDDALTRKLEGLVLKDINGVYEPGKR--RWLKIKRDYLNEGSMADSADLVVL 417
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
G YYG G +GG +A FL+ + ++ + ++ C +G D L + +LK +
Sbjct: 418 GAYYGKGAKGGIMAVFLMGCYD---DESGKWKTVTKC---SGHDDNTLRELQDQLK-MIK 470
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
+ PK+ P + N PD +E P++S I I+ T + S+RFPR
Sbjct: 471 INKDPKKIPE---WLVVNKIYIPDFVVEDPKQSQIWEISGAEFTSSKSHTANGISIRFPR 527
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHS 267
R+R DK W + + V L S
Sbjct: 528 FTRIREDKTWKESTHLNDLVNLTKS 552
>gi|373447363|gb|AEY72749.1| DNA ligase [Vaccinia virus]
Length = 552
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 101/205 (49%), Gaps = 15/205 (7%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLII 122
N ++ + + + EG+VLKD+ +EPG R +WLK+K +Y+ GS D++++
Sbjct: 360 NESQLTDVLDDALTRKLEGLVLKDINGVYEPGKR--RWLKIKRDYLNEGSMADSADLVVL 417
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
G YYG G +GG +A FL+ + ++ + ++ C +G D L + +LK +
Sbjct: 418 GAYYGKGAKGGIMAVFLMGCYD---DESGKWKTVTKC---SGHDDNTLRELQDQLK-MIK 470
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
+ PK+ P + N PD +E P++S I I+ T + S+RFPR
Sbjct: 471 INKDPKKIPE---WLVVNKIYIPDFVVEDPKQSQIWEISGAEFTSSKSHTANGISIRFPR 527
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHS 267
R+R DK W + + V L S
Sbjct: 528 FTRIREDKTWKESTHLNDLVNLTKS 552
>gi|373448081|gb|AEY73464.1| DNA ligase [Vaccinia virus]
gi|373449036|gb|AEY74415.1| DNA ligase [Vaccinia virus]
gi|373449265|gb|AEY74643.1| DNA ligase [Vaccinia virus]
Length = 552
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 101/205 (49%), Gaps = 15/205 (7%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLII 122
N ++ + + + EG+VLKD+ +EPG R +WLK+K +Y+ GS D++++
Sbjct: 360 NESQLTDVLDDALTRKLEGLVLKDINGVYEPGKR--RWLKIKRDYLNEGSMADSADLVVL 417
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
G YYG G +GG +A FL+ + ++ + ++ C +G D L + +LK +
Sbjct: 418 GAYYGKGAKGGIMAVFLMGCYD---DESGKWKTVTKC---SGHDDNTLRELQDQLK-MIK 470
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
+ PK+ P + N PD +E P++S I I+ T + S+RFPR
Sbjct: 471 INKDPKKIPE---WLVVNKIYIPDFVVEDPKQSQIWEISGAEFTSSKSHTANGISIRFPR 527
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHS 267
R+R DK W + + V L S
Sbjct: 528 FTRIREDKTWKESTHLNDLVNLTKS 552
>gi|373447838|gb|AEY73222.1| DNA ligase [Vaccinia virus]
gi|373448323|gb|AEY73705.1| DNA ligase [Vaccinia virus]
gi|373449506|gb|AEY74883.1| DNA ligase [Vaccinia virus]
Length = 552
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 101/205 (49%), Gaps = 15/205 (7%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLII 122
N ++ + + + EG+VLKD+ +EPG R +WLK+K +Y+ GS D++++
Sbjct: 360 NESQLTDVLDDALTRKLEGLVLKDINGVYEPGKR--RWLKIKRDYLNEGSMADSADLVVL 417
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
G YYG G +GG +A FL+ + ++ + ++ C +G D L + +LK +
Sbjct: 418 GAYYGKGAKGGIMAVFLMGCYD---DESGKWKTVTKC---SGHDDNTLRELQDQLK-MIK 470
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
+ PK+ P + N PD +E P++S I I+ T + S+RFPR
Sbjct: 471 INKDPKKIPE---WLVVNKIYIPDFVVEDPKQSQIWEISGAEFTSSKSHTANGISIRFPR 527
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHS 267
R+R DK W + + V L S
Sbjct: 528 FTRIREDKTWKESTHLNDLVNLTKS 552
>gi|348531984|ref|XP_003453487.1| PREDICTED: DNA ligase 3 [Oreochromis niloticus]
Length = 1012
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 105/206 (50%), Gaps = 20/206 (9%)
Query: 67 VDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIG 123
D + + +E +E G+VLKD+ S +EPG R WLK+K +Y+ G+ D++++G
Sbjct: 647 ADMITRVIREGLE----GLVLKDVKSTYEPGKRH--WLKVKKDYLNEGAMADTADLVVLG 700
Query: 124 GYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRK 183
+YG G GG ++ FL+ + PD+ ++ C +G D+ + A + K +
Sbjct: 701 AFYGKGSNGGIMSSFLMGCYD---PDSKKWCTVTKC---SGGYDDAMLARLQKELDMIKI 754
Query: 184 YEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA-PYSLRFPR 242
+ P + P S+ ++ N PD I PE + + IT +SE+ +A S+RFPR
Sbjct: 755 SKDPSKIP-SWLKIIKNY--YPDFIIRDPENAPVWEITG-AEFSKSEMHTADGISIRFPR 810
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSS 268
+ R+R DK W ++ EL S
Sbjct: 811 MTRIRDDKDWKSATNLHQLKELYRIS 836
>gi|194373981|dbj|BAG62303.1| unnamed protein product [Homo sapiens]
Length = 612
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 109/228 (47%), Gaps = 22/228 (9%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEYIRA-GSDL 117
SL +++++ +F ++++++ EG+++K D+ + +E RS WLKLK +Y+ G L
Sbjct: 391 SLDTKDIEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDGVGDTL 450
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D+++IG Y G G+R G FL+A + + + + + C++GTG SDEEL+ L
Sbjct: 451 DLVVIGAYLGRGKRAGRYGGFLLASYDEDSEELH-----AICKLGTGFSDEELEEHHQSL 505
Query: 178 KPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRSEVFS 233
K P V + PD W++ K LS++ R V S
Sbjct: 506 KALVLPSPRP--------YVRIDGAVIPDHWLDPSAVWEVKCADLSLSPIYPAARGLVDS 557
Query: 234 -APYSLRFPRIDRVRYDK-PWHDCLDVQSFVELVHSSNGTTQKGKEYG 279
SLRFPR RVR DK P Q S Q+G++ G
Sbjct: 558 DKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQSQIQNQQGEDSG 605
>gi|242216175|ref|XP_002473897.1| predicted protein [Postia placenta Mad-698-R]
gi|220726997|gb|EED80930.1| predicted protein [Postia placenta Mad-698-R]
Length = 805
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 95/166 (57%), Gaps = 20/166 (12%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLK---------LKPEYIRA- 113
D+V ++ + +R EG+V+K S++ R+ W+K +KPEY+ +
Sbjct: 375 GRTADDVRTRMEDIMASRGEGLVIKHPNSQYVLSGRNSDWIKASCWTRGFNVKPEYMDSM 434
Query: 114 GSDLDVLIIGGYYGSGRRGGEVAQFLVALAE--RPAPDTYPRRFISFCRVGTGLSDEELD 171
G +DV+++ G YG+GRR G V+ + A+ + RPA + P ++ +F R+GTGLS D
Sbjct: 435 GETVDVIVVAGNYGTGRRSGGVSTLVCAVVDDRRPADEVEP-KYSTFVRIGTGLS--YAD 491
Query: 172 AVVTKLKPYFRKYEYPKRAPPSFYQVT-NNSKERPDVWIESPEKSI 216
+ + KP+ K PK PPSF QV S+++ DV++E P++SI
Sbjct: 492 YIWVRQKPW--KTWDPKN-PPSFLQVAKKGSEDKGDVYLE-PQESI 533
>gi|428671778|gb|EKX72693.1| ATP-dependent DNA ligase domain containing protein [Babesia equi]
Length = 709
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 102/199 (51%), Gaps = 25/199 (12%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLII 122
++DE++ F + + + EG+++K L G+ +EP RS KWLK K +YI SD +D++ I
Sbjct: 508 SLDEIDDFLRLAVADSCEGLMIKSLDDGATYEPQKRSNKWLKFKKDYIAGMSDSVDLVPI 567
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
+YG G+R +L+A+ D F C+ GTG +D+ L + L+
Sbjct: 568 AAFYGKGKRTNVYGSYLLAIY-----DPVQEIFQGVCKTGTGFTDQTLKYLYDTLQ---- 618
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPE-----KSIILSITSDIRTIRSEVFS--AP 235
++ P + P Y+V++ K PDVW PE K+ LSI S + T + + +
Sbjct: 619 QHIIPSKLPT--YEVSD--KLEPDVWF-MPEKVWECKAADLSI-SPVYTAANRLTANGKG 672
Query: 236 YSLRFPRIDRVRYDKPWHD 254
LRFPR R R DK D
Sbjct: 673 IGLRFPRFLRDRDDKKAID 691
>gi|88900793|gb|ABD57705.1| VACV169 [Vaccinia virus]
Length = 552
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 101/205 (49%), Gaps = 15/205 (7%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLII 122
N ++ + + + EG+VLKD+ +EPG R +WLK+K +Y+ GS D++++
Sbjct: 360 NESQLTDVLDDALTRKLEGLVLKDINGVYEPGKR--RWLKIKRDYLNEGSMADSADLVVL 417
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
G YYG G +GG +A FL+ + ++ + ++ C +G D L + +LK +
Sbjct: 418 GAYYGKGAKGGIMAVFLMGCYD---DESGKWKTVTKC---SGHDDNTLRELQDQLK-MIK 470
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
+ PK+ P + N PD +E P++S I I+ T + S+RFPR
Sbjct: 471 INKDPKKIPE---WLVVNKIYIPDFVVEDPKQSQIWEISGAEFTSSKSHTANGISIRFPR 527
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHS 267
R+R DK W + + V L S
Sbjct: 528 FTRIREDKTWKESTHLNDLVNLTKS 552
>gi|38349042|gb|AAR18018.1| DNA ligase [Vaccinia virus]
gi|373448553|gb|AEY73934.1| DNA ligase [Vaccinia virus]
Length = 552
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 100/205 (48%), Gaps = 15/205 (7%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLII 122
N ++ + + + EG+VLKD+ +EPG R +WLK+K +Y+ GS D++++
Sbjct: 360 NESQLTDVLDDALTRKLEGLVLKDINGVYEPGKR--RWLKIKRDYLNEGSMADSADLVVL 417
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
G YYG G +GG +A FL+ + + + ++ C +G D L + +LK +
Sbjct: 418 GAYYGKGAKGGIMAVFLMGCYDDKSG---KWKTVTKC---SGHDDNTLRELQDQLK-MIK 470
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
+ PK+ P + N PD +E P++S I I+ T + S+RFPR
Sbjct: 471 INKDPKKIPE---WLVVNKIYIPDFVVEDPKQSQIWEISGAEFTSSKSHTANGISIRFPR 527
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHS 267
R+R DK W + + V L S
Sbjct: 528 FTRIREDKTWKESTHLNDLVNLTKS 552
>gi|354475980|ref|XP_003500203.1| PREDICTED: LOW QUALITY PROTEIN: DNA ligase 1-like [Cricetulus
griseus]
Length = 931
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 101/203 (49%), Gaps = 31/203 (15%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEY-IRAGSDL 117
SL +++++ +F ++++++ EG+++K D+ + +E RS WLKLK ++ + G L
Sbjct: 710 SLDTKDIEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDFLVGVGDTL 769
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D+++IG Y G G+R G FL+A A D + C++GTG SDEEL+ L
Sbjct: 770 DLVVIGAYLGRGKRAGRYGGFLLA-----AYDEESEELQAICKLGTGFSDEELEEHHQSL 824
Query: 178 K----PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE-----KSIILSITSDIRTIR 228
K P R Y V + PD W++ P+ K LS++ R
Sbjct: 825 KALVLPTPRPY------------VRIDGAVAPDHWLD-PKVVWEVKCADLSLSPIYPAAR 871
Query: 229 SEV-FSAPYSLRFPRIDRVRYDK 250
V SLRFPR RVR DK
Sbjct: 872 GLVDKEKGISLRFPRFIRVREDK 894
>gi|90819836|gb|ABD98646.1| VACV-DUKE-184 [Vaccinia virus]
Length = 552
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 101/205 (49%), Gaps = 15/205 (7%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLII 122
N ++ + + + EG+VLKD+ +EPG R +WLK+K +Y+ GS D++++
Sbjct: 360 NESQLTDVLDDALTRKLEGLVLKDINGVYEPGKR--RWLKIKRDYLNEGSMADSADLVVL 417
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
G YYG G +GG +A FL+ + ++ + ++ C +G D L + +LK +
Sbjct: 418 GAYYGKGAKGGIMAVFLMGCYD---DESGKWKTVTKC---SGHDDNTLRELQDQLK-MIK 470
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
+ PK+ P + N PD +E P++S I I+ T + S+RFPR
Sbjct: 471 INKDPKKIPE---WLVVNKIYIPDFVVEDPKQSQIWEISGAEFTSSKSHTANGISIRFPR 527
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHS 267
R+R DK W + + V L S
Sbjct: 528 FTRIREDKTWKESTHLNDLVNLTKS 552
>gi|37551621|gb|AAQ93273.1| DNA ligase [Vaccinia virus]
gi|373449747|gb|AEY75123.1| DNA ligase [Vaccinia virus]
Length = 552
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 101/205 (49%), Gaps = 15/205 (7%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLII 122
N ++ + + + EG+VLKD+ +EPG R +WLK+K +Y+ GS D++++
Sbjct: 360 NESQLTDVLDDALTRKLEGLVLKDINGVYEPGKR--RWLKIKRDYLNEGSMADSADLVVL 417
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
G YYG G +GG +A FL+ + ++ + ++ C +G D L + +LK +
Sbjct: 418 GAYYGKGAKGGIMAVFLMGCYD---DESGKWKTVTKC---SGHDDNTLRELQDQLK-MIK 470
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
+ PK+ P + N PD +E P++S I I+ T + S+RFPR
Sbjct: 471 INKDPKKIPE---WLVVNKIYIPDFVVEDPKQSQIWEISGAEFTSSKSHTANGISIRFPR 527
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHS 267
R+R DK W + + V L S
Sbjct: 528 FTRIREDKTWKESTHLNDLVNLTKS 552
>gi|373448794|gb|AEY74174.1| DNA ligase [Vaccinia virus]
Length = 552
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 100/205 (48%), Gaps = 15/205 (7%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLII 122
N ++ + + + EG+VLKD+ +EPG R +WLK+K +Y+ GS D++++
Sbjct: 360 NESQLTDVLDDALTRKLEGLVLKDINGVYEPGKR--RWLKIKRDYLNEGSMADSADLVVL 417
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
G YYG G +GG +A FL+ + + + ++ C +G D L + +LK +
Sbjct: 418 GAYYGKGAKGGIMAVFLMGCYDDKSG---KWKTVTKC---SGHDDNTLRELQDQLK-MIK 470
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
+ PK+ P + N PD +E P++S I I+ T + S+RFPR
Sbjct: 471 INKDPKKIPE---WLVVNKIYIPDFVVEDPKQSQIWEISGAEFTSSKSHTANGISIRFPR 527
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHS 267
R+R DK W + + V L S
Sbjct: 528 FTRIREDKTWKESTHLNDLVNLTKS 552
>gi|410493561|ref|YP_006908759.1| putative ATP-dependent DNA ligase [Abalone herpesvirus
Victoria/AUS/2009]
gi|408776091|gb|AFU90119.1| putative ATP-dependent DNA ligase [Abalone herpesvirus
Victoria/AUS/2009]
Length = 629
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 106/242 (43%), Gaps = 39/242 (16%)
Query: 62 LVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEYIRAGSD-LD 118
++++ ++++ F + ++ EG+++K D+ + +E RS WLKLK +Y+ D LD
Sbjct: 398 MMSNKPEDIQTFMNKAVKEDCEGLMIKTLDVNATYEIAKRSRSWLKLKKDYMEGVCDTLD 457
Query: 119 VLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLK 178
+++IGG+ G G+R G FL+A PD + + S C++GTG SDE+L +
Sbjct: 458 LVVIGGFNGVGKRTGTYGAFLLACYN---PDN--QMYESICKIGTGFSDEDL------IN 506
Query: 179 PYFRKYEYPKRAPPSFYQVTNNSKERPDVWI--------------ESPEKSIILSITSDI 224
+ E + Y V S +PD W SP + + S
Sbjct: 507 QHKLLSEVRREGAQENYLV--GSTMKPDQWFLPSYVWEVKVADLTVSPVHKAAIGLVSQT 564
Query: 225 RTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 284
I SLRFPR +RVR DK D E+ + + + G +
Sbjct: 565 EGI---------SLRFPRFERVREDKKGEDATTSAQVAEMYNGQDQIVNAKRRAEGEAEG 615
Query: 285 KP 286
P
Sbjct: 616 AP 617
>gi|189189482|ref|XP_001931080.1| DNA ligase 1 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187972686|gb|EDU40185.1| DNA ligase 1 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 908
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 100/196 (51%), Gaps = 21/196 (10%)
Query: 65 HNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVL 120
+ ++E++ +++++ EG+++K L S +EP RS WLK+K +Y+ G LD++
Sbjct: 689 NELEEIQTLLEDSVKEGCEGLMVKMLDGPESFYEPSKRSQNWLKVKKDYLAGVGDSLDLV 748
Query: 121 IIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPY 180
++G YYG G+R FL+A P T ++ + C +GTG S+ L+++ L
Sbjct: 749 VLGAYYGKGKRTSWYGAFLLACYN---PKT--EKYETVCNIGTGFSEAILESLHKTLS-- 801
Query: 181 FRKYEYPKRAPPSFYQVTNNSKERPDVWIES----PEKSIILSITSDIRTIRSEVFSA-- 234
E P FY + +K++PDVW E K+ L+++ + EV
Sbjct: 802 ----EIVIDRPKPFYTHSTGNKDQPDVWFEPRYVWEVKTADLTLSPRYKAAADEVGGGGK 857
Query: 235 PYSLRFPRIDRVRYDK 250
SLRFPR + R DK
Sbjct: 858 GVSLRFPRFIKERDDK 873
>gi|380475426|emb|CCF45260.1| DNA ligase [Colletotrichum higginsianum]
Length = 553
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 116/248 (46%), Gaps = 27/248 (10%)
Query: 42 LSQLRSQIMAADQTGEPCWSLVAH----NVDEVEKFFKETIENRDEGIVLKDLG---SKW 94
L + R + A Q E +S H +++++ F E+++ EG+++K L S +
Sbjct: 305 LRERRDLLEDAFQPVEGEFSFATHMDGQELEQIQVFLDESVKASCEGLMVKMLDGSESGY 364
Query: 95 EPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPR 153
EP RS WLK+K +Y+ G LD++++G Y+G G+R FL+A P+ ++Y
Sbjct: 365 EPSKRSRNWLKIKKDYLSGIGDSLDLVVLGAYHGKGKRTSVYGAFLLA-CYNPSSESYE- 422
Query: 154 RFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIES-- 211
+ C +GTG S+ L+ + T+L + P FY ++ + +PDVW E
Sbjct: 423 ---TVCNIGTGFSEAVLEELHTQLS------DIVIDRPKPFYAHSSGGQHQPDVWFEPRY 473
Query: 212 --PEKSIILSITSDIRTIRSEVFSA----PYSLRFPRIDRVRYDKPWHDCLDVQSFVELV 265
K+ L+++ + E SLRFPR +VR DK + + E+
Sbjct: 474 VWEVKTADLTLSPRYKAGCKEGVDPGGEKGISLRFPRFIKVRDDKKPDEATSSRQVAEMY 533
Query: 266 HSSNGTTQ 273
T+
Sbjct: 534 RKQESVTK 541
>gi|325967622|ref|YP_004243814.1| ATP-dependent DNA ligase I [Vulcanisaeta moutnovskia 768-28]
gi|323706825|gb|ADY00312.1| DNA ligase I, ATP-dependent Dnl1 [Vulcanisaeta moutnovskia 768-28]
Length = 606
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 105/214 (49%), Gaps = 30/214 (14%)
Query: 63 VAHNVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYIRAGSD-LDV 119
V ++ +E++KFF E I + EG++ K + S +E G R W+K K +Y +D LD+
Sbjct: 396 VINDAEELDKFFHEAISDGCEGVMCKSIKADSIYEMGARGWLWIKYKRDYRSELTDTLDL 455
Query: 120 LIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 179
+++G ++G G+R G L+A A P D +F + +VG+G +DE+L KLK
Sbjct: 456 VVVGAFWGRGKRAGTYGALLIA-AYDPKTD----QFYTVSKVGSGFTDEDL----VKLKQ 506
Query: 180 YFRKYEYPKRAPPSFYQVTNNSKERPDVW------IESPEKSIILSI--TSDIRTIRSEV 231
Y P R P SK PDVW +E I LS T + ++RS+V
Sbjct: 507 MLDPYRIPHRHPRVV------SKMEPDVWFVPAVVLEIIGAEITLSPLHTCCVGSVRSDV 560
Query: 232 FSAPYSLRFPRI-DRVRYDKPWHDCLDVQSFVEL 264
A +RFPR R R DK V +E+
Sbjct: 561 GLA---IRFPRFTGRYRTDKSPEQATTVDEILEM 591
>gi|126466208|ref|YP_001041317.1| ATP-dependent DNA ligase [Staphylothermus marinus F1]
gi|91177882|gb|ABE27150.1| ATP-dependent DNA ligase [Staphylothermus marinus]
gi|126015031|gb|ABN70409.1| DNA ligase I, ATP-dependent Dnl1 [Staphylothermus marinus F1]
Length = 611
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 116/225 (51%), Gaps = 23/225 (10%)
Query: 48 QIMAADQTGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLK 105
+I+ +T + + +N DE+EKFF + IE+ EG+++K L + ++ G R W+K
Sbjct: 392 EIIEQTETFQIAEYIRTNNPDELEKFFLKAIEDGAEGVMIKALHKNAIYQAGTRGWLWIK 451
Query: 106 LKPEYIRAGSD-LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTG 164
K +Y D +D+++IG +YG GRRGG+ L+A + P D F S C+VG+G
Sbjct: 452 YKRDYKSEMIDTVDLVVIGAFYGRGRRGGKYGALLMA-SYNPDKDV----FESVCKVGSG 506
Query: 165 LSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILS---IT 221
DE++D + LKPY ++++P+ ++ +PDVW+ + I+
Sbjct: 507 FKDEDIDKLPEMLKPYIIEHKHPRVV----------ARMKPDVWVTPALVAEIIGAELTL 556
Query: 222 SDIRTIRSEVF--SAPYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
S + T ++ S+RFPR R R DK D Q +E+
Sbjct: 557 SPLHTCCLDIIKPGVGISIRFPRFIRWRPDKGPEDATTSQELLEM 601
>gi|402217987|gb|EJT98065.1| ATP-dependent DNA ligase [Dacryopinax sp. DJM-731 SS1]
Length = 846
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 108/234 (46%), Gaps = 32/234 (13%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDL---GSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLI 121
+ +E++ F +++++ EG+++K L S +EP RS WLKLK +Y+ G D+++
Sbjct: 628 STEEIQTFLDQSVKDGCEGLMVKMLQSDASYYEPSRRSVNWLKLKKDYLTGVGDSFDLVV 687
Query: 122 IGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYF 181
+G Y+G G+R FL+A D+ +F + C++GTG +D+ L LK
Sbjct: 688 VGAYHGHGKRTAVYGAFLLACY-----DSDSEQFQTICKIGTGFTDDALLQHHNTLKGLE 742
Query: 182 RKYEYPKRAPPSFYQVTNNSKERPDVWIESPEK-----SIILSITSDIRTIRSEVFSAPY 236
AP + +PDVW +P + LS++ + V
Sbjct: 743 VDVMRSDIAP---------GQAKPDVWF-TPTVVWEVLAADLSLSPVYTAAQGLVEERGI 792
Query: 237 SLRFPRIDRVRYDKPWHDCLDVQSFVE------LVHSSNGTTQKGKEYGGLQDD 284
SLRFPR RVR DK D + + L S G ++G G ++DD
Sbjct: 793 SLRFPRFIRVRDDKAPEDSTSPEQIADMYERQALAQSKGGKKRRGD--GEIEDD 844
>gi|133892266|ref|NP_034845.2| DNA ligase 1 [Mus musculus]
gi|133892807|ref|NP_001076657.1| DNA ligase 1 [Mus musculus]
gi|313151236|ref|NP_001186239.1| DNA ligase 1 [Mus musculus]
gi|74150551|dbj|BAE32302.1| unnamed protein product [Mus musculus]
gi|187952925|gb|AAI38542.1| Lig1 protein [Mus musculus]
gi|223459942|gb|AAI38543.1| Lig1 protein [Mus musculus]
Length = 932
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 102/206 (49%), Gaps = 37/206 (17%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEYIRA-GSDL 117
SL + +++ +F ++++++ EG+++K D+ + +E RS WLKLK +Y+ G L
Sbjct: 712 SLDTKDTEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDGVGDTL 771
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELD----AV 173
D+++IG Y G G+R G FL+A A D + C++GTG SDEEL+ ++
Sbjct: 772 DLVVIGAYLGRGKRAGRYGGFLLA-----AYDEESEELQAICKLGTGFSDEELEEHHQSL 826
Query: 174 VTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFS 233
+ P R Y V + PD W++ SI+ + ++ S ++
Sbjct: 827 QALVLPTPRPY------------VRIDGAVAPDHWLDP---SIVWEVKCADLSL-SPIYP 870
Query: 234 AP---------YSLRFPRIDRVRYDK 250
A SLRFPR RVR DK
Sbjct: 871 AARGLVDKEKGISLRFPRFIRVRKDK 896
>gi|312136730|ref|YP_004004067.1| DNA ligase i, ATP-dependent dnl1 [Methanothermus fervidus DSM 2088]
gi|311224449|gb|ADP77305.1| DNA ligase I, ATP-dependent Dnl1 [Methanothermus fervidus DSM 2088]
Length = 554
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 93/195 (47%), Gaps = 31/195 (15%)
Query: 65 HNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVLIIGG 124
N+D+ EK FKE+IE EGI++KD + + PG R K LK K E LD+++IGG
Sbjct: 380 ENIDDAEKLFKESIEAGHEGIMIKDPNAPYIPGIRGKKMLKYKAE----PETLDLVVIGG 435
Query: 125 YYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKY 184
YG G+R V +LVA + + P V TGL D+ L + +++
Sbjct: 436 DYGEGKRAHLVGSYLVAARDEDTGELKP-----VAHVATGLDDDTLKNLTERME------ 484
Query: 185 EYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRID 244
++ N K + IE K I+ S+I ++S + + YSLRFP +
Sbjct: 485 -----------RIMVNKKGKK---IEVEPKIILEVAFSEI--VKSPEYESGYSLRFPVVK 528
Query: 245 RVRYDKPWHDCLDVQ 259
R+R D D VQ
Sbjct: 529 RIRDDLSLEDVDTVQ 543
>gi|147918976|ref|YP_687298.1| ATP-dependent DNA ligase [Methanocella arvoryzae MRE50]
gi|121682804|sp|Q0W0X1.1|DNLI_UNCMA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|110622694|emb|CAJ37972.1| ATP-dependent DNA ligase [Methanocella arvoryzae MRE50]
Length = 568
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 101/205 (49%), Gaps = 31/205 (15%)
Query: 45 LRSQIMAADQTGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWL 104
L ++A D +P +LV ++ ++ F+E++++ +EG++ KDL + + PG R K +
Sbjct: 364 LEEIVIATDSVIQPARALVTDQEEKAQELFEESVKSGNEGLMGKDLNATYTPGVRGKKMV 423
Query: 105 KLKPEYIRAGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTG 164
K+K LD+ I+ +G GR+ G + F VA + D ++ RV +G
Sbjct: 424 KIKSVL----DTLDLAIVSAEWGHGRKAGWLTSFEVAALDEETGD-----YVILGRVASG 474
Query: 165 LSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDI 224
SDE+L + KLKP E+ + RP++ +E + I
Sbjct: 475 FSDEQLIEMTEKLKPLITG-EHGRIV-----------DVRPEIIVEVKFEEI-------- 514
Query: 225 RTIRSEVFSAPYSLRFPRIDRVRYD 249
+S ++S+ Y+LRFPR+ RVR D
Sbjct: 515 --QKSPIYSSGYALRFPRLVRVRDD 537
>gi|325558556|gb|ADZ29935.1| DNA ligase [Cowpox virus]
Length = 552
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 101/205 (49%), Gaps = 15/205 (7%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLII 122
N ++ + + + EG+VLKD+ +EPG R +WLK+K +Y+ GS D++++
Sbjct: 360 NESQLTDVLDDALTRKLEGLVLKDINGVYEPGKR--RWLKIKRDYLNEGSMADSADLVVL 417
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
G YYG G +GG +A FL+ + ++ + ++ C +G D L + +LK +
Sbjct: 418 GAYYGKGAKGGIMAVFLMGCYD---DESGKWKTVTKC---SGHDDNTLRGLQDQLK-MIK 470
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
+ PK+ P + N PD ++ P++S I I+ T + S+RFPR
Sbjct: 471 INKDPKKIPE---WLVVNKIYIPDFVVDDPKQSQIWEISGAEFTSSKSHTANGISIRFPR 527
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHS 267
R+R DK W + + V L S
Sbjct: 528 FTRIREDKTWKESTHLNDLVNLTKS 552
>gi|340508217|gb|EGR33971.1| hypothetical protein IMG5_028790 [Ichthyophthirius multifiliis]
Length = 709
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 109/232 (46%), Gaps = 42/232 (18%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYIR--AGSDLDV 119
+ +++++++ +++++ EG+++K L S +EP RS KWLKLK +Y+ G LD+
Sbjct: 496 SQDMEQIQEMLEKSLKKGCEGLMVKTLENNSTYEPAKRSFKWLKLKKDYLELGLGDTLDL 555
Query: 120 LIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 179
+ I +YGSG+R G +L+A R+ S C++GTG SDE L+A
Sbjct: 556 VPIAAFYGSGKRVGLYGAYLLACYNEDM-----ERYESVCKIGTGFSDEVLEACY----K 606
Query: 180 YFRKYEYPKRAPPSFYQVTNNSKERPDVWIE--------------SPEKSIILSITSDIR 225
+F+ P++ F + DVW++ SP + + S+ +
Sbjct: 607 FFQDKIIPQKQDDYFV-----GDFKADVWLKPCVVWEVKGADLQISPVYTCGVGDVSENK 661
Query: 226 TIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKE 277
I LRFPR+ RVR DK D + SF+ ++ G E
Sbjct: 662 GI---------GLRFPRLARVRNDKNVTDSTN-PSFIVDLYKQQAVVSNGLE 703
>gi|242008936|ref|XP_002425250.1| DNA ligase, putative [Pediculus humanus corporis]
gi|212508998|gb|EEB12512.1| DNA ligase, putative [Pediculus humanus corporis]
Length = 927
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 103/207 (49%), Gaps = 20/207 (9%)
Query: 70 VEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYY 126
+ K FK+ +E G+VLKD S +EPG R WLK+K +Y+ G+ D++++G ++
Sbjct: 530 ITKVFKQGLE----GLVLKDKKSVYEPGKRH--WLKVKKDYLCDGAMADSADLVVLGAWF 583
Query: 127 GSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEY 186
G+G +GG ++ FL+ D +++++ +V +G ++ LD + +L + +
Sbjct: 584 GTGHKGGIMSSFLMGCY-----DAKSKKWVTVTKVSSGHDEQTLDRIQKEL-SVVKISKD 637
Query: 187 PKRAPPSFYQVTNNSKER-PDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDR 245
P + P N +K PD P+K + IT T + S+RFPR+ +
Sbjct: 638 PSKVP----NWLNCTKTMIPDFVANDPKKMPVWEITGAEFTCNQVHTANGISIRFPRVTK 693
Query: 246 VRYDKPWHDCLDVQSFVELVHSSNGTT 272
+R DK W ++ +L S T+
Sbjct: 694 IRSDKDWASATNLSELKKLFKKSKDTS 720
>gi|148706113|gb|EDL38060.1| ligase I, DNA, ATP-dependent, isoform CRA_a [Mus musculus]
Length = 934
Score = 82.8 bits (203), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 102/206 (49%), Gaps = 37/206 (17%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEYIRA-GSDL 117
SL + +++ +F ++++++ EG+++K D+ + +E RS WLKLK +Y+ G L
Sbjct: 714 SLDTKDTEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDGVGDTL 773
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELD----AV 173
D+++IG Y G G+R G FL+A A D + C++GTG SDEEL+ ++
Sbjct: 774 DLVVIGAYLGRGKRAGRYGGFLLA-----AYDEESEELQAICKLGTGFSDEELEEHHQSL 828
Query: 174 VTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFS 233
+ P R Y V + PD W++ SI+ + ++ S ++
Sbjct: 829 QALVLPTPRPY------------VRIDGAVAPDHWLDP---SIVWEVKCADLSL-SPIYP 872
Query: 234 AP---------YSLRFPRIDRVRYDK 250
A SLRFPR RVR DK
Sbjct: 873 AARGLVDKEKGISLRFPRFIRVRKDK 898
>gi|370703040|ref|YP_004956842.1| orf94 gene product [Helicoverpa zea nudivirus 2]
gi|365199637|gb|AEW69643.1| DNA ligase [Helicoverpa zea nudivirus 2]
Length = 1953
Score = 82.8 bits (203), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 99/193 (51%), Gaps = 15/193 (7%)
Query: 74 FKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIR-AGSDLDVLIIGGYYGSGRRG 132
FK+ + EG++LK S + PG R +WLK+K +Y + +G D++I+G +YG+GR G
Sbjct: 1752 FKQCMRLNMEGLMLKCANSCYMPGKR--RWLKMKRDYFKNSGDTADLIILGAWYGTGRLG 1809
Query: 133 GEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPP 192
G ++ FL+ + D ++ +V GL+D ++ + L+P + P
Sbjct: 1810 GLLSVFLMGCLDS---DCVEPTWVGLTKVHAGLNDVQIKQLNDILEP-LMVHSAAMDVPW 1865
Query: 193 SFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPW 252
F V +S++ P + P++ +L + + +E+ +A S RFPR+ R+R DK W
Sbjct: 1866 RFVNVK-DSRKLPTMIALDPKQMPVLEV------LCTEL-TASLSFRFPRVIRIRSDKDW 1917
Query: 253 HDCLDVQSFVELV 265
++ EL
Sbjct: 1918 TGVTSLRYIKELA 1930
>gi|148706115|gb|EDL38062.1| ligase I, DNA, ATP-dependent, isoform CRA_c [Mus musculus]
Length = 932
Score = 82.8 bits (203), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 102/206 (49%), Gaps = 37/206 (17%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEYIRA-GSDL 117
SL + +++ +F ++++++ EG+++K D+ + +E RS WLKLK +Y+ G L
Sbjct: 712 SLDTKDTEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDGVGDTL 771
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELD----AV 173
D+++IG Y G G+R G FL+A A D + C++GTG SDEEL+ ++
Sbjct: 772 DLVVIGAYLGRGKRAGRYGGFLLA-----AYDEESEELQAICKLGTGFSDEELEEHHQSL 826
Query: 174 VTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFS 233
+ P R Y V + PD W++ SI+ + ++ S ++
Sbjct: 827 QALVLPTPRPY------------VRIDGAVAPDHWLDP---SIVWEVKCADLSL-SPIYP 870
Query: 234 AP---------YSLRFPRIDRVRYDK 250
A SLRFPR RVR DK
Sbjct: 871 AARGLVDKEKGISLRFPRFIRVRKDK 896
>gi|363745059|ref|XP_003643178.1| PREDICTED: DNA ligase 1-like [Gallus gallus]
Length = 775
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 98/206 (47%), Gaps = 37/206 (17%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRA-GSDL 117
S+ + DEV F + I+ EG+++K L + +E RS KWLKLK +Y+ G L
Sbjct: 556 SMDTRSADEVSDFLDKAIKASCEGLMVKTLEVEATYEIAKRSHKWLKLKKDYLDGLGDTL 615
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDA----- 172
D+++IG Y G G+R G FL+A D + S C++GTG ++E L+
Sbjct: 616 DLVVIGAYLGKGKRAGIYGGFLLACY-----DEESEEYQSICKIGTGFTEESLEKHYNFL 670
Query: 173 ---VVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIR 225
V+T+ +PY+R ++ PD W+ + + K LSI+ R
Sbjct: 671 KEHVLTQPRPYYR----------------WDNAVAPDRWLAAVQVWEVKCGDLSISPVYR 714
Query: 226 TIRSEV-FSAPYSLRFPRIDRVRYDK 250
V SLRFPR RVR DK
Sbjct: 715 AAVGLVDEDKGISLRFPRFLRVRGDK 740
>gi|296241957|ref|YP_003649444.1| ATP-dependent DNA ligase I [Thermosphaera aggregans DSM 11486]
gi|296094541|gb|ADG90492.1| DNA ligase I, ATP-dependent Dnl1 [Thermosphaera aggregans DSM
11486]
Length = 611
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 105/204 (51%), Gaps = 23/204 (11%)
Query: 69 EVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGY 125
E+EKFF + I EG+++K L GS ++ G R W+K K +Y D +D++++G +
Sbjct: 404 ELEKFFLQAISEGAEGVMVKALHEGSVYQAGTRGWLWIKFKRDYRSEMVDTVDLVVVGAF 463
Query: 126 YGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYE 185
YG GRRGG+ L+A + P+ DT F + C+VG+G +DE+LD + LKP+ R
Sbjct: 464 YGRGRRGGKFGTLLMA-SYNPSNDT----FETVCKVGSGFTDEDLDKIPELLKPFIR--- 515
Query: 186 YPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFS-----APYSLRF 240
R P + ++ PDVW+E + I+ + I + + A S+RF
Sbjct: 516 --DRKP-----LRVVAEMEPDVWVEPALVAEIIGAELTLSPIHTCAYGKIKPEAGISIRF 568
Query: 241 PRIDRVRYDKPWHDCLDVQSFVEL 264
PR R R DK D VE+
Sbjct: 569 PRFIRWRDDKKPEDATTSDELVEM 592
>gi|428184512|gb|EKX53367.1| hypothetical protein GUITHDRAFT_161026 [Guillardia theta CCMP2712]
Length = 837
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 95/207 (45%), Gaps = 21/207 (10%)
Query: 67 VDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGY 125
V+ E +E + EG+V+K + + PG RS WLK+K +Y+ +D LD++ IG +
Sbjct: 616 VEGAHAVLLEALEAQCEGLVVKQADAPYHPGKRSDAWLKVKKDYVEGLADSLDLIPIGAW 675
Query: 126 YGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYE 185
GSGR+ G + +L+A+ P+T S CRV +G +D + K
Sbjct: 676 NGSGRKAGWFSPWLMAVQN---PETG--ELQSICRVMSGFTDAFYKEATARFKDKIVT-- 728
Query: 186 YPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIR-SEVFSAP----YSLRF 240
+PPS+Y N P W E+ E I + + V P +LRF
Sbjct: 729 ----SPPSYYITGEN----PSTWFEASEVWEIRGAELTASPVHMAAVGEGPEGRGLALRF 780
Query: 241 PRIDRVRYDKPWHDCLDVQSFVELVHS 267
PR R+R+DK + + ++L S
Sbjct: 781 PRFLRIRHDKTMEEASTCEQVLDLFRS 807
>gi|410914952|ref|XP_003970951.1| PREDICTED: DNA ligase 3-like [Takifugu rubripes]
Length = 983
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 112/224 (50%), Gaps = 20/224 (8%)
Query: 67 VDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIG 123
D + + +E +E G+VLKD+ +EPG R WLK+K +Y+ G+ D++++G
Sbjct: 624 ADMITRVIREGLE----GLVLKDVKGMYEPGKRH--WLKVKKDYLNEGAMADTADLVVLG 677
Query: 124 GYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRK 183
+YG G GG ++ FL+ + PD+ ++ C +G D+ + A + K +
Sbjct: 678 AFYGKGSNGGIMSSFLMGCYD---PDSKKWCTVTKC---SGGYDDAMLARLQKELDVVKI 731
Query: 184 YEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA-PYSLRFPR 242
+ P + P ++ ++ N PD I +PE++ + IT +SE+ +A S+RFPR
Sbjct: 732 SKEPSKIP-NWLKIVKNY--YPDFIIRNPEEAPVWEITG-AEFSKSEMHTADGISIRFPR 787
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKP 286
+ R+R DK W ++ EL S + G +DKP
Sbjct: 788 MTRIRDDKDWKTATNLNQLKELYRISKENSAFKVTAGPSDNDKP 831
>gi|224487994|sp|A3DP49.2|DNLI_STAMF RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
Length = 597
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 116/225 (51%), Gaps = 23/225 (10%)
Query: 48 QIMAADQTGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLK 105
+I+ +T + + +N DE+EKFF + IE+ EG+++K L + ++ G R W+K
Sbjct: 378 EIIEQTETFQIAEYIRTNNPDELEKFFLKAIEDGAEGVMIKALHKNAIYQAGTRGWLWIK 437
Query: 106 LKPEYIRAGSD-LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTG 164
K +Y D +D+++IG +YG GRRGG+ L+A + P D F S C+VG+G
Sbjct: 438 YKRDYKSEMIDTVDLVVIGAFYGRGRRGGKYGALLMA-SYNPDKDV----FESVCKVGSG 492
Query: 165 LSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILS---IT 221
DE++D + LKPY ++++P+ ++ +PDVW+ + I+
Sbjct: 493 FKDEDIDKLPEMLKPYIIEHKHPRVV----------ARMKPDVWVTPALVAEIIGAELTL 542
Query: 222 SDIRTIRSEVF--SAPYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
S + T ++ S+RFPR R R DK D Q +E+
Sbjct: 543 SPLHTCCLDIIKPGVGISIRFPRFIRWRPDKGPEDATTSQELLEM 587
>gi|94483809|gb|ABF22926.1| DNA ligase [Variola virus]
gi|94485826|gb|ABF24933.1| DNA ligase [Variola virus]
gi|94488055|gb|ABF27151.1| DNA ligase [Variola virus]
Length = 552
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 100/205 (48%), Gaps = 15/205 (7%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLII 122
N ++ + + + EG+VLKD+ +EPG R +WLK+K +Y+ GS D++++
Sbjct: 360 NESQLTNVLDDALTRKLEGLVLKDINGVYEPGKR--RWLKIKRDYLNEGSMADSADLVVL 417
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
G YYG G +GG +A FL+ + ++ + ++ C +G D L + +L +
Sbjct: 418 GAYYGKGAKGGIMAVFLMGCYD---DESGKWKTVTKC---SGHDDNTLRVLQDQL-TMVK 470
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
+ PK+ P + N PD +E P++S I I+ T + S+RFPR
Sbjct: 471 INKDPKKIPE---WLVVNKIYIPDFVVEDPKQSQIWEISGAEFTSSKSHTANGISIRFPR 527
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHS 267
R+R DK W + + V L S
Sbjct: 528 FTRIREDKTWKESTHLNDLVNLTKS 552
>gi|20271416|gb|AAH28287.1| Lig1 protein [Mus musculus]
Length = 916
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 102/206 (49%), Gaps = 37/206 (17%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEYIRA-GSDL 117
SL + +++ +F ++++++ EG+++K D+ + +E RS WLKLK +Y+ G L
Sbjct: 696 SLDTKDTEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDGVGDTL 755
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELD----AV 173
D+++IG Y G G+R G FL+A A D + C++GTG SDEEL+ ++
Sbjct: 756 DLVVIGAYLGRGKRAGRYGGFLLA-----AYDEESEELQAICKLGTGFSDEELEEHHQSL 810
Query: 174 VTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFS 233
+ P R Y V + PD W++ SI+ + ++ S ++
Sbjct: 811 QALVLPTPRPY------------VRIDGAVAPDHWLDP---SIVWEVKCADLSL-SPIYP 854
Query: 234 AP---------YSLRFPRIDRVRYDK 250
A SLRFPR RVR DK
Sbjct: 855 AARGLVDKEKGISLRFPRFIRVRKDK 880
>gi|330934475|ref|XP_003304562.1| hypothetical protein PTT_17200 [Pyrenophora teres f. teres 0-1]
gi|311318741|gb|EFQ87336.1| hypothetical protein PTT_17200 [Pyrenophora teres f. teres 0-1]
Length = 909
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 100/196 (51%), Gaps = 21/196 (10%)
Query: 65 HNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVL 120
+ ++E++ +++++ EG+++K L S +EP RS WLK+K +Y+ G LD++
Sbjct: 690 NELEEIQTLLEDSVKEGCEGLMVKMLDGPESFYEPSKRSQNWLKVKKDYLAGVGDSLDLV 749
Query: 121 IIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPY 180
++G YYG G+R FL+A P T ++ + C +GTG S+ L+++ L
Sbjct: 750 VLGAYYGKGKRTSWYGAFLLACYN---PKT--EKYETVCNIGTGFSEVILESLHKTLS-- 802
Query: 181 FRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRSEVFSA-- 234
E P FY + +K++PDVW E K+ L+++ + EV
Sbjct: 803 ----EIVIDRPKPFYTHSTGNKDQPDVWFEPRHVWEVKTADLTLSPRYKAAADEVGGGGK 858
Query: 235 PYSLRFPRIDRVRYDK 250
SLRFPR + R DK
Sbjct: 859 GVSLRFPRFIKERDDK 874
>gi|1352290|sp|P37913.2|DNLI1_MOUSE RecName: Full=DNA ligase 1; AltName: Full=DNA ligase I; AltName:
Full=Polydeoxyribonucleotide synthase [ATP] 1
gi|641912|gb|AAB60500.1| DNA ligase I [Mus musculus]
gi|905354|gb|AAA70403.1| DNA ligase I [Mus musculus]
Length = 916
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 102/206 (49%), Gaps = 37/206 (17%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEYIRA-GSDL 117
SL + +++ +F ++++++ EG+++K D+ + +E RS WLKLK +Y+ G L
Sbjct: 696 SLDTKDTEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDGVGDTL 755
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELD----AV 173
D+++IG Y G G+R G FL+A A D + C++GTG SDEEL+ ++
Sbjct: 756 DLVVIGAYLGRGKRAGRYGGFLLA-----AYDEESEELQAICKLGTGFSDEELEEHHQSL 810
Query: 174 VTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFS 233
+ P R Y V + PD W++ SI+ + ++ S ++
Sbjct: 811 QALVLPTPRPY------------VRIDGAVAPDHWLDP---SIVWEVKCADLSL-SPIYP 854
Query: 234 AP---------YSLRFPRIDRVRYDK 250
A SLRFPR RVR DK
Sbjct: 855 AARGLVDKEKGISLRFPRFIRVRKDK 880
>gi|56967028|pdb|1X9N|A Chain A, Crystal Structure Of Human Dna Ligase I Bound To
5'-Adenylated, Nicked Dna
Length = 688
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 108/233 (46%), Gaps = 22/233 (9%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEYIRA-GSDL 117
SL +++++ +F ++++++ EG+ +K D+ + +E RS WLKLK +Y+ G L
Sbjct: 467 SLDTKDIEQIAEFLEQSVKDSCEGLXVKTLDVDATYEIAKRSHNWLKLKKDYLDGVGDTL 526
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D+++IG Y G G+R G FL+A + D + C++GTG SDEEL+ L
Sbjct: 527 DLVVIGAYLGRGKRAGRYGGFLLA-----SYDEDSEELQAICKLGTGFSDEELEEHHQSL 581
Query: 178 KPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRSEVFS 233
K P V + PD W++ K LS++ R V S
Sbjct: 582 KALVLPSPRP--------YVRIDGAVIPDHWLDPSAVWEVKCADLSLSPIYPAARGLVDS 633
Query: 234 -APYSLRFPRIDRVRYDK-PWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 284
SLRFPR RVR DK P Q S Q+G++ G +D
Sbjct: 634 DKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQSQIQNQQGEDSGSDPED 686
>gi|147901021|ref|NP_001082183.1| ligase III, DNA, ATP-dependent [Xenopus laevis]
gi|18029882|gb|AAL56552.1|AF393654_1 DNA ligase III isoform alpha [Xenopus laevis]
Length = 988
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 121/288 (42%), Gaps = 35/288 (12%)
Query: 41 MLSQLRSQIMAADQTGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRS 100
M S+++ AAD D + + +E +E G+VLKD+ S +EPG R
Sbjct: 591 MFSEMKHVTKAADL------------ADMITRVIREGLE----GLVLKDIKSNYEPGKRH 634
Query: 101 GKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFIS 157
WLK+K +Y+ G+ D+ ++G YYG G GG ++ FL+ D + + +
Sbjct: 635 --WLKVKKDYLNEGAMADTADLAVLGAYYGKGANGGIMSIFLMGCY-----DPEGQLWCT 687
Query: 158 FCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSII 217
+ +G D L + +L K PS+ ++ N PD I+ P+K+ I
Sbjct: 688 VTKCSSGYDDATLQRLQKELN--MVKISKDPSKIPSWLKINKNY--FPDFIIQDPKKAPI 743
Query: 218 LSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKE 277
IT + + S+RFPR R R DK W +Q EL S +
Sbjct: 744 WEITGAEYSKAEAHTAGGLSIRFPRCTRFRDDKDWKTATTLQQLKELYRLSKEKSDFNIT 803
Query: 278 YGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQT-----DVSDIKGETS 320
QD+ SSR+ E + ++T S KG+TS
Sbjct: 804 ATSSQDEDGSSECSSRENEGNSTQTSSGSLVKTIKNVPSKSPAKGKTS 851
>gi|148706114|gb|EDL38061.1| ligase I, DNA, ATP-dependent, isoform CRA_b [Mus musculus]
Length = 938
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 102/206 (49%), Gaps = 37/206 (17%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEYIRA-GSDL 117
SL + +++ +F ++++++ EG+++K D+ + +E RS WLKLK +Y+ G L
Sbjct: 718 SLDTKDTEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDGVGDTL 777
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELD----AV 173
D+++IG Y G G+R G FL+A A D + C++GTG SDEEL+ ++
Sbjct: 778 DLVVIGAYLGRGKRAGRYGGFLLA-----AYDEESEELQAICKLGTGFSDEELEEHHQSL 832
Query: 174 VTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFS 233
+ P R Y V + PD W++ SI+ + ++ S ++
Sbjct: 833 QALVLPTPRPY------------VRIDGAVAPDHWLDP---SIVWEVKCADLSL-SPIYP 876
Query: 234 AP---------YSLRFPRIDRVRYDK 250
A SLRFPR RVR DK
Sbjct: 877 AARGLVDKEKGISLRFPRFIRVRKDK 902
>gi|440790289|gb|ELR11572.1| ATPdependent DNA ligase domain containing protein, partial
[Acanthamoeba castellanii str. Neff]
Length = 667
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 93/189 (49%), Gaps = 10/189 (5%)
Query: 83 EGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSGRRGGEVAQFLVA 141
EG+++KD+G ++P R WLKLK +Y+ +D D++++G Y+G+G GG ++ FL+
Sbjct: 316 EGLMIKDIGDVYKPDKRH--WLKLKKDYLAGMADSADLVVLGAYFGTGAYGGMMSVFLMG 373
Query: 142 LAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYE--YPKRAPPSFYQVTN 199
+ R + C+ G G D L + +L+P+ ++ Y K P +++
Sbjct: 374 SYDPDEEKWKARSRNTVCKAGNGFDDAALKQLQKQLRPHMKQIHKSYDKWNP---HKMPR 430
Query: 200 NSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQ 259
+ PD + PE++ + + + S+RFPR+ R+R DK + DV
Sbjct: 431 HRLHVPDFIVTDPEQAPVWEVAG--QGFTDSKHHTTLSIRFPRVTRIRDDKDFSTHTDVV 488
Query: 260 SFVELVHSS 268
L +S
Sbjct: 489 HLRALAQAS 497
>gi|118775|sp|P20492.1|DNLI_VACCC RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|335530|gb|AAA48182.1| putative A50R [Vaccinia virus Copenhagen]
Length = 552
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 100/205 (48%), Gaps = 15/205 (7%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLII 122
N ++ + + + EG+VLKD+ +EPG R +WLK+K +Y+ GS D++++
Sbjct: 360 NESQLTDVLDDALTRKLEGLVLKDINGVYEPGKR--RWLKIKRDYLNEGSMADSADLVVL 417
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
G YYG G +GG +A FL+ + ++ + ++ C +G D L + +L +
Sbjct: 418 GAYYGKGAKGGIMAVFLMGCYD---DESGKWKTVTKC---SGHDDNTLRVLQDQL-TMIK 470
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
+ PK+ P + N PD +E P++S I I+ T + S+RFPR
Sbjct: 471 INKDPKKIPE---WLVVNKIYIPDFVVEDPKQSQIWEISGAEFTSSKSHTANGISIRFPR 527
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHS 267
R+R DK W + + V L S
Sbjct: 528 FTRIREDKTWKESTHLNDLVNLTKS 552
>gi|171184553|ref|YP_001793472.1| ATP-dependent DNA ligase [Pyrobaculum neutrophilum V24Sta]
gi|224487911|sp|B1YA52.1|DNLI_THENV RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|170933765|gb|ACB39026.1| DNA ligase I, ATP-dependent Dnl1 [Pyrobaculum neutrophilum V24Sta]
Length = 584
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 95/200 (47%), Gaps = 16/200 (8%)
Query: 69 EVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYG 127
EV+ FF E + EG+V K S +E G R W+K K +Y D +D++++G +YG
Sbjct: 386 EVDVFFHEAVSLGMEGLVCKSPTSIYEMGARGWNWIKYKRDYKSEMIDTVDLVVVGAFYG 445
Query: 128 SGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYP 187
G+R G FL+A A P D F + C+VG+G +D +L + L+P Y+ P
Sbjct: 446 RGKRAGLYGAFLLA-AYDPQTDM----FYTVCKVGSGFTDADLKKMYEVLQP----YKIP 496
Query: 188 KRAPPSFYQVTNNSKERPDVWIESPEKSIILSI--TSDIRTIRSEVFSAPYSLRFPRI-D 244
R P ++T + P V IE I LS T + +R V A +RFPR
Sbjct: 497 HRHPRVVSKMTPDVWFTPQVVIEVIGAEITLSPLHTCCLGAVRPGVGLA---IRFPRFTG 553
Query: 245 RVRYDKPWHDCLDVQSFVEL 264
R R DK VEL
Sbjct: 554 RYRTDKSPEQATTPAEMVEL 573
>gi|94487447|gb|ABF26546.1| DNA ligase [Variola virus]
Length = 552
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 100/205 (48%), Gaps = 15/205 (7%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLII 122
N ++ + + + EG+VLKD+ +EPG R +WLK+K +Y+ GS D++++
Sbjct: 360 NESQLTDVLDDVLTRKLEGLVLKDINGVYEPGKR--RWLKIKRDYLNEGSMADSADLVVL 417
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
G YYG G +GG +A FL+ + ++ + ++ C +G D L + +L +
Sbjct: 418 GAYYGKGAKGGIMAVFLMGCYD---DESGKWKTVTKC---SGHDDNTLRVLQDQL-TMVK 470
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
+ PK+ P + N PD +E P++S I I+ T + S+RFPR
Sbjct: 471 INKDPKKIPE---WLVVNKIYIPDFVVEDPKQSQIWEISGAEFTSSKSHTANGISIRFPR 527
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHS 267
R+R DK W + + V L S
Sbjct: 528 FTRIREDKTWKESTHLNDLVNLTKS 552
>gi|439074|gb|AAA60905.1| homolog of vaccinia virus CDS A50R (DNA ligase); putative [Variola
major virus]
gi|94484625|gb|ABF23738.1| DNA ligase [Variola virus]
gi|94484823|gb|ABF23935.1| DNA ligase [Variola virus]
gi|94485021|gb|ABF24132.1| DNA ligase [Variola virus]
gi|109724409|gb|ABG43534.1| DNA ligase [Variola virus]
Length = 552
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 100/205 (48%), Gaps = 15/205 (7%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLII 122
N ++ + + + EG+VLKD+ +EPG R +WLK+K +Y+ GS D++++
Sbjct: 360 NESQLTDVLDDALTRKLEGLVLKDINGVYEPGKR--RWLKIKRDYLNEGSMADSADLVVL 417
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
G YYG G +GG +A FL+ + ++ + ++ C +G D L + +L +
Sbjct: 418 GAYYGKGAKGGIMAVFLMGCYD---DESGKWKTVTKC---SGHDDNTLRVLQDQL-TMVK 470
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
+ PK+ P + N PD +E P++S I I+ T + S+RFPR
Sbjct: 471 INKDPKKIPE---WLVVNKIYIPDFVVEDPKQSQIWEISGAEFTSSKSHTANGISIRFPR 527
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHS 267
R+R DK W + + V L S
Sbjct: 528 FTRIREDKTWKESTHLNDLVNLTKS 552
>gi|325558773|gb|ADZ30151.1| DNA ligase [Cowpox virus]
Length = 554
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 100/205 (48%), Gaps = 15/205 (7%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLII 122
N ++ + + + EG+VLKD+ +EPG R +WLK+K +Y+ GS D++++
Sbjct: 362 NESQLTDVLDDALTRKLEGLVLKDINGVYEPGKR--RWLKIKRDYLNEGSMADSADLVVL 419
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
G YYG G +GG +A FL+ + ++ + ++ C +G D L + +L +
Sbjct: 420 GAYYGKGAKGGIMAVFLMGCYD---DESGKWKTVTKC---SGHDDNTLRVLQDQL-TMVK 472
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
+ PK+ P + N PD +E P++S I I+ T + S+RFPR
Sbjct: 473 INKDPKKIPE---WLVVNKIYIPDFVVEDPKQSQIWEISGAEFTSSKSHTANGISIRFPR 529
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHS 267
R+R DK W + + V L S
Sbjct: 530 FTRIREDKTWKESTHLNDLVNLTKS 554
>gi|5830724|emb|CAB54763.1| K4R protein [Variola minor virus]
Length = 552
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 100/205 (48%), Gaps = 15/205 (7%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLII 122
N ++ + + + EG+VLKD+ +EPG R +WLK+K +Y+ GS D++++
Sbjct: 360 NESQLTDVLDDALTRKLEGLVLKDINGVYEPGKR--RWLKIKRDYLNEGSMADSADLVVL 417
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
G YYG G +GG +A FL+ + ++ + ++ C +G D L + +L +
Sbjct: 418 GAYYGKGAKGGIMAVFLMGCYD---DESGKWKTVTKC---SGHDDNTLRVLQDQL-TMVK 470
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
+ PK+ P + N PD +E P++S I I+ T + S+RFPR
Sbjct: 471 INKDPKKIPE---WLVVNKIYIPDFVVEDPKQSQIWEISGAEFTSSKSHTANGISIRFPR 527
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHS 267
R+R DK W + + V L S
Sbjct: 528 FTRIREDKTWKESTHLNDLVNLTKS 552
>gi|355699355|gb|AES01100.1| ligase I, DNA, ATP-dependent [Mustela putorius furo]
Length = 919
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 99/202 (49%), Gaps = 29/202 (14%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEYIRA-GSDL 117
SL + +++ +F ++++++ EG+++K D+ + +E RS WLKLK +Y+ G L
Sbjct: 699 SLDTKDTEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDGVGDTL 758
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D+++IG Y G G+R G FL+A A D + C++GTG SDEEL+ +L
Sbjct: 759 DLVVIGAYLGRGKRAGRYGGFLLA-----AYDEESEELQAICKLGTGFSDEELEEHHHRL 813
Query: 178 K----PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRS 229
+ P R Y V + PD W++ K LS++ R
Sbjct: 814 QALVLPSPRPY------------VRVDGAVAPDHWLDPSAVWEVKCADLSLSPIYPAARG 861
Query: 230 EV-FSAPYSLRFPRIDRVRYDK 250
V SLRFPR RVR DK
Sbjct: 862 LVDGEKGISLRFPRFIRVREDK 883
>gi|325558988|gb|ADZ30365.1| DNA ligase [Cowpox virus]
Length = 554
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 100/205 (48%), Gaps = 15/205 (7%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLII 122
N ++ + + + EG+VLKD+ +EPG R +WLK+K +Y+ GS D++++
Sbjct: 362 NESQLTDVLDDALTRKLEGLVLKDINGVYEPGKR--RWLKIKRDYLNEGSMADSADLVVL 419
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
G YYG G +GG +A FL+ + ++ + ++ C +G D L + +L +
Sbjct: 420 GAYYGKGAKGGIMAVFLMGCYD---DESGKWKTVTKC---SGHDDNTLRVLQDQL-TMVK 472
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
+ PK+ P + N PD +E P++S I I+ T + S+RFPR
Sbjct: 473 INKDPKKIPE---WLVVNKIYIPDFVVEDPKQSQIWEISGAEFTSSKSHTANGISIRFPR 529
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHS 267
R+R DK W + + V L S
Sbjct: 530 FTRIREDKTWKESTHLNDLVNLTKS 554
>gi|21492584|ref|NP_659704.1| DNA ligase [Sheeppox virus]
Length = 557
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 113/226 (50%), Gaps = 25/226 (11%)
Query: 42 LSQLRSQIMAADQTGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSG 101
++++++++M ++ + + +++ K + I+ + EG++LK + + PG R
Sbjct: 347 INEIKNKVMVSE-------AFYVYKENDLNKIMDDVIKKKLEGLILKGININYVPGKRG- 398
Query: 102 KWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISF 158
WLK+K +Y+ GS D++++G YYG G +GG + FL+ + + + + ++
Sbjct: 399 -WLKMKKDYLDDGSMADSADLVVLGSYYGKGSKGGTPSIFLMGCYDNESNN---WKTVTK 454
Query: 159 CRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIIL 218
C +G +D+ L V ++K F K + P + V N PD + P+KS +
Sbjct: 455 C---SGHNDDTLKKVQKEIK--FLKISKDTKKIPKWLIV--NKIYYPDFVVCDPKKSQVW 507
Query: 219 SITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
I+ T + S+RFPR ++RYDK W L SF EL
Sbjct: 508 EISGSSFTKSIHHTADGISIRFPRFKKIRYDKNW---LSATSFNEL 550
>gi|9627683|ref|NP_042206.1| hypothetical protein VARVgp162 [Variola virus]
gi|461948|sp|P33798.1|DNLI_VAR67 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|457053|emb|CAA49103.1| J4R [Variola virus]
gi|516403|emb|CAA47545.1| DNA ligase [Variola virus]
gi|94484013|gb|ABF23129.1| DNA ligase [Variola virus]
gi|94484216|gb|ABF23331.1| DNA ligase [Variola virus]
gi|94484423|gb|ABF23537.1| DNA ligase [Variola virus]
gi|94485219|gb|ABF24329.1| DNA ligase [Variola virus]
gi|94486030|gb|ABF25136.1| DNA ligase [Variola virus]
gi|94486231|gb|ABF25336.1| DNA ligase [Variola virus]
gi|94486434|gb|ABF25538.1| DNA ligase [Variola virus]
gi|94486637|gb|ABF25740.1| DNA ligase [Variola virus]
gi|94486839|gb|ABF25941.1| DNA ligase [Variola virus]
gi|94487244|gb|ABF26344.1| DNA ligase [Variola virus]
gi|94487650|gb|ABF26748.1| DNA ligase [Variola virus]
gi|94487851|gb|ABF26948.1| DNA ligase [Variola virus]
gi|94488258|gb|ABF27353.1| DNA ligase [Variola virus]
gi|94488458|gb|ABF27552.1| DNA ligase [Variola virus]
gi|94488658|gb|ABF27751.1| DNA ligase [Variola virus]
gi|94488859|gb|ABF27951.1| DNA ligase [Variola virus]
gi|94489059|gb|ABF28150.1| DNA ligase [Variola virus]
gi|94489259|gb|ABF28349.1| DNA ligase [Variola virus]
gi|94489460|gb|ABF28549.1| DNA ligase [Variola virus]
gi|94489662|gb|ABF28750.1| DNA ligase [Variola virus]
gi|94489861|gb|ABF28948.1| DNA ligase [Variola virus]
gi|94490067|gb|ABF29153.1| DNA ligase [Variola virus]
gi|94490270|gb|ABF29355.1| DNA ligase [Variola virus]
gi|109724205|gb|ABG43331.1| DNA ligase [Variola virus]
gi|109724612|gb|ABG43736.1| DNA ligase [Variola virus]
gi|109724816|gb|ABG43939.1| DNA ligase [Variola virus]
gi|109725019|gb|ABG44141.1| DNA ligase [Variola virus]
gi|109725224|gb|ABG44345.1| DNA ligase [Variola virus]
gi|109725429|gb|ABG44549.1| DNA ligase [Variola virus]
gi|109725631|gb|ABG44750.1| DNA ligase [Variola virus]
gi|109725835|gb|ABG44953.1| DNA ligase [Variola virus]
gi|109726038|gb|ABG45155.1| DNA ligase [Variola virus]
gi|109726242|gb|ABG45358.1| DNA ligase [Variola virus]
gi|109726444|gb|ABG45559.1| DNA ligase [Variola virus]
gi|109726648|gb|ABG45762.1| DNA ligase [Variola virus]
gi|745284|prf||2015436GH J4R gene
Length = 552
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 100/205 (48%), Gaps = 15/205 (7%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLII 122
N ++ + + + EG+VLKD+ +EPG R +WLK+K +Y+ GS D++++
Sbjct: 360 NESQLTDVLDDALTRKLEGLVLKDINGVYEPGKR--RWLKIKRDYLNEGSMADSADLVVL 417
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
G YYG G +GG +A FL+ + ++ + ++ C +G D L + +L +
Sbjct: 418 GAYYGKGAKGGIMAVFLMGCYD---DESGKWKTVTKC---SGHDDNTLRVLQDQL-TMVK 470
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
+ PK+ P + N PD +E P++S I I+ T + S+RFPR
Sbjct: 471 INKDPKKIPE---WLVVNKIYIPDFVVEDPKQSQIWEISGAEFTSSKSHTANGISIRFPR 527
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHS 267
R+R DK W + + V L S
Sbjct: 528 FTRIREDKTWKESTHLNDLVNLTKS 552
>gi|94487042|gb|ABF26143.1| DNA ligase [Variola virus]
Length = 552
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 100/205 (48%), Gaps = 15/205 (7%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLII 122
N ++ + + + EG+VLKD+ +EPG R +WLK+K +Y+ GS D++++
Sbjct: 360 NESQLTDVLDDALTRKLEGLVLKDINGVYEPGKR--RWLKIKRDYLNEGSMADSADLVVL 417
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
G YYG G +GG +A FL+ + ++ + ++ C +G D L + +L +
Sbjct: 418 GAYYGKGAKGGIMAVFLMGCYD---DESGKWKTVTKC---SGHDDNTLRVLQDQL-TMVK 470
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
+ PK+ P + N PD +E P++S I I+ T + S+RFPR
Sbjct: 471 INKDPKKIPE---WLVVNKIYIPDFVVEDPKQSQIWEISGAEFTSSKSHTANGISIRFPR 527
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHS 267
R+R DK W + + V L S
Sbjct: 528 FTRIREDKTWKESTHLNDLVNLTKS 552
>gi|94485421|gb|ABF24530.1| DNA ligase [Variola virus]
gi|94485624|gb|ABF24732.1| DNA ligase [Variola virus]
Length = 552
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 100/205 (48%), Gaps = 15/205 (7%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLII 122
N ++ + + + EG+VLKD+ +EPG R +WLK+K +Y+ GS D++++
Sbjct: 360 NESQLTDVLDDALTRKLEGLVLKDINGVYEPGKR--RWLKIKRDYLNEGSMADSADLVVL 417
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
G YYG G +GG +A FL+ + ++ + ++ C +G D L + +L +
Sbjct: 418 GAYYGKGAKGGIMAVFLMGCYD---DESGKWKTVTKC---SGHDDNTLRVLQDQL-TMVK 470
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
+ PK+ P + N PD +E P++S I I+ T + S+RFPR
Sbjct: 471 INKDPKKIPE---WLVVNKIYIPDFVVEDPKQSQIWEISGAEFTSSKSHTANGISIRFPR 527
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHS 267
R+R DK W + + V L S
Sbjct: 528 FTRIREDKTWKESTHLNDLVNLTKS 552
>gi|325558342|gb|ADZ29722.1| DNA ligase [Cowpox virus]
Length = 552
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 100/205 (48%), Gaps = 15/205 (7%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLII 122
N ++ + + + EG+VLKD+ +EPG R +WLK+K +Y+ GS D++++
Sbjct: 360 NESQLTDVLDDALTRKLEGLVLKDINGVYEPGKR--RWLKIKRDYLNEGSMADSADLVVL 417
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
G YYG G +GG +A FL+ + ++ + ++ C +G D L + +L +
Sbjct: 418 GAYYGKGAKGGIMAVFLMGCYD---DESGKWKTVTKC---SGHDDNTLRVLQDQL-TMVK 470
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
+ PK+ P + N PD +E P++S I I+ T + S+RFPR
Sbjct: 471 INKDPKKIPE---WLVVNKIYIPDFVVEDPKQSQIWEISGAEFTSSKSHTANGISIRFPR 527
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHS 267
R+R DK W + + V L S
Sbjct: 528 FTRIREDKTWKESTHLNDLVNLTKS 552
>gi|302406130|ref|XP_003000901.1| DNA ligase [Verticillium albo-atrum VaMs.102]
gi|261360159|gb|EEY22587.1| DNA ligase [Verticillium albo-atrum VaMs.102]
Length = 893
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 106/225 (47%), Gaps = 23/225 (10%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSD 116
S+ ++++++F E+++ EG+++K L S +EP RS WLK+K +Y+ G
Sbjct: 668 SMDGQELEQIQEFLDESVKASCEGLMVKMLDGTESGYEPSKRSRNWLKIKKDYLAGIGDS 727
Query: 117 LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTK 176
LD++++G Y+G G+R FL+A P+ + Y + C +GTG S+ L+ + +
Sbjct: 728 LDLVVLGAYHGKGKRTSVYGAFLLA-CYNPSGEVYE----TVCNIGTGFSEAVLEELHKQ 782
Query: 177 LKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIES----PEKSIILSITSDIRTIRSEVF 232
L E P FY + + +PDVW E K+ L+++ + E
Sbjct: 783 LS------EIVIDRPKPFYSHSAGGQHQPDVWFEPRCVWEVKTADLTLSPRYKAGAKEGV 836
Query: 233 SAP----YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQ 273
SLRFPR ++R DK + + E+ T+
Sbjct: 837 DPSGEKGISLRFPRFIKIRDDKKPDEATSSRQVAEMYRKQESVTK 881
>gi|66275973|ref|YP_233058.1| ATP-dependent DNA ligase [Vaccinia virus]
gi|118776|sp|P16272.1|DNLI_VACCV RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|62230|emb|CAA34519.1| unnamed protein product [Vaccinia virus]
gi|222739|dbj|BAA01824.1| 63.3K protein [Vaccinia virus]
gi|29692282|gb|AAO89455.1| DNA ligase [Vaccinia virus WR]
Length = 552
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 100/205 (48%), Gaps = 15/205 (7%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLII 122
N ++ + + + EG+VLKD+ +EPG R +WLK+K +Y+ GS D++++
Sbjct: 360 NESQLTDVLDDALTRKLEGLVLKDINGVYEPGKR--RWLKIKRDYLNEGSMADSADLVVL 417
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
G YYG G +GG +A FL+ + ++ + ++ C +G D L + +L +
Sbjct: 418 GAYYGKGAKGGIMAVFLMGCYD---DESGKWKTVTKC---SGHDDNTLRVLQDQL-TMVK 470
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
+ PK+ P + N PD +E P++S I I+ T + S+RFPR
Sbjct: 471 INKDPKKIPE---WLVVNKIYIPDFVVEDPKQSQIWEISGAEFTSSKSHTANGISIRFPR 527
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHS 267
R+R DK W + + V L S
Sbjct: 528 FTRIREDKTWKESTHLNDLVNLTKS 552
>gi|62288482|gb|AAX78496.1| unknown [synthetic construct]
Length = 578
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 100/205 (48%), Gaps = 15/205 (7%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLII 122
N ++ + + + EG+VLKD+ +EPG R +WLK+K +Y+ GS D++++
Sbjct: 386 NESQLTDVLDDALTRKLEGLVLKDINGVYEPGKR--RWLKIKRDYLNEGSMADSADLVVL 443
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
G YYG G +GG +A FL+ + ++ + ++ C +G D L + +L +
Sbjct: 444 GAYYGKGAKGGIMAVFLMGCYD---DESGKWKTVTKC---SGHDDNTLRVLQDQL-TMVK 496
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
+ PK+ P + N PD +E P++S I I+ T + S+RFPR
Sbjct: 497 INKDPKKIPE---WLVVNKIYIPDFVVEDPKQSQIWEISGAEFTSSKSHTANGISIRFPR 553
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHS 267
R+R DK W + + V L S
Sbjct: 554 FTRIREDKTWKESTHLNDLVNLTKS 578
>gi|297527107|ref|YP_003669131.1| DNA ligase I, ATP-dependent Dnl1 [Staphylothermus hellenicus DSM
12710]
gi|297256023|gb|ADI32232.1| DNA ligase I, ATP-dependent Dnl1 [Staphylothermus hellenicus DSM
12710]
Length = 611
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 115/225 (51%), Gaps = 23/225 (10%)
Query: 48 QIMAADQTGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLK 105
+I+ +T + + ++ DE+EKFF + IE+ EG+++K L + ++ G R W+K
Sbjct: 392 EIIEQTETFQIAEYIRTNDPDELEKFFFKAIEDGAEGVMIKALHKNAIYQAGTRGWLWIK 451
Query: 106 LKPEYIRAGSD-LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTG 164
K +Y D +D++IIG +YG GRRGG+ L+A + P D F S C+VG+G
Sbjct: 452 YKRDYKSEMIDTVDLVIIGAFYGRGRRGGKYGALLMA-SYNPDKDV----FESVCKVGSG 506
Query: 165 LSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDI 224
DE++D + LKPY ++++P+ ++ +PD+W+ + I+ +
Sbjct: 507 FKDEDIDKLPEMLKPYIIEHKHPRVV----------ARMKPDIWVTPALVAEIIGAELTL 556
Query: 225 RTIRSEVFSA-----PYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
+ + A S+RFPR R R DK D Q +E+
Sbjct: 557 SPLHTCCLDAIKPGVGISIRFPRFIRWRPDKGPEDATTSQELLEM 601
>gi|18640405|ref|NP_570561.1| CMLV171 [Camelpox virus]
gi|18483081|gb|AAL73878.1|AF438165_168 DNA ligase [Camelpox virus M-96]
gi|19718142|gb|AAG37667.1| CMP168R [Camelpox virus CMS]
Length = 552
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 94/188 (50%), Gaps = 15/188 (7%)
Query: 83 EGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGGEVAQFL 139
EG+VLKD+ +EPG R +WLK+K +Y+ GS D++++G YYG G +GG +A FL
Sbjct: 377 EGLVLKDINGVYEPGKR--RWLKIKRDYLNEGSMADSADLVVLGAYYGKGSKGGIMAVFL 434
Query: 140 VALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTN 199
+ + ++ + ++ C +G D L + +L + + PK+ P +
Sbjct: 435 MGCYD---DESGKWKTVTKC---SGHDDNTLRVLQDQLM-MVKINKDPKKIPE---WLVV 484
Query: 200 NSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQ 259
N PD +E P++S I I+ T + S+RFPR R+R DK W + +
Sbjct: 485 NKIYIPDFVVEDPKQSQIWEISGTEFTSSKSHTANGISIRFPRFTRIREDKTWKESTHLN 544
Query: 260 SFVELVHS 267
V L S
Sbjct: 545 DLVNLTKS 552
>gi|90660409|gb|ABD97523.1| DNA ligase [Cowpox virus]
Length = 552
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 100/205 (48%), Gaps = 15/205 (7%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLII 122
N ++ + + + EG+VLKD+ +EPG R +WLK+K +Y+ GS D++++
Sbjct: 360 NESQLTDVLDDALTRKLEGLVLKDINGVYEPGKR--RWLKIKRDYLNEGSMADSADLVVL 417
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
G YYG G +GG +A FL+ + ++ + ++ C +G D L + +L +
Sbjct: 418 GAYYGKGAKGGIMAVFLMGCYD---DESGKWKTVTKC---SGHDDNTLRVLQDQL-TMVK 470
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
+ PK+ P + N PD +E P++S I I+ T + S+RFPR
Sbjct: 471 INKDPKKIPE---WLVVNKIYIPDFVVEDPKQSQIWEISGAEFTSSKSHTANGISIRFPR 527
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHS 267
R+R DK W + + V L S
Sbjct: 528 FTRIREDKTWKESTHLNDLVNLTKS 552
>gi|325557912|gb|ADZ29294.1| DNA ligase [Cowpox virus]
Length = 552
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 100/205 (48%), Gaps = 15/205 (7%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLII 122
N ++ + + + EG+VLKD+ +EPG R +WLK+K +Y+ GS D++++
Sbjct: 360 NESQLTDVLDDALTRKLEGLVLKDINGVYEPGKR--RWLKIKRDYLNEGSMADSADLVVL 417
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
G YYG G +GG +A FL+ + ++ + ++ C +G D L + +L +
Sbjct: 418 GAYYGKGAKGGIMAVFLMGCYD---DESGKWKTVTKC---SGHDDNTLRVLQDQL-TMVK 470
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
+ PK+ P + N PD +E P++S I I+ T + S+RFPR
Sbjct: 471 INKDPKKIPE---WLVVNKIYIPDFVVEDPKQSQIWEISGAEFTSSKSHTANGISIRFPR 527
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHS 267
R+R DK W + + V L S
Sbjct: 528 FTRIREDKTWKESTHLNDLVNLTKS 552
>gi|431920819|gb|ELK18592.1| DNA ligase 1 [Pteropus alecto]
Length = 926
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 98/202 (48%), Gaps = 29/202 (14%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEYIRA-GSDL 117
SL + D++ +F ++++ + EG+++K D+ + +E RS WLKLK +Y+ G L
Sbjct: 705 SLDTKDTDQIAEFLEQSVRDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDGVGDTL 764
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D+++IG Y G G+R G FL+A A D + C++GTG SD+ L+ +L
Sbjct: 765 DLVVIGAYLGRGKRAGRYGGFLLA-----AYDEDSEELQAICKLGTGFSDDALEEHHHRL 819
Query: 178 K----PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRS 229
+ P R Y V + PD W+E K LS++ R
Sbjct: 820 QALVLPSPRSY------------VRADGAVAPDHWLEPSAVWEVKCADLSLSPIYPAARG 867
Query: 230 EVFS-APYSLRFPRIDRVRYDK 250
V S SLRFPR RVR DK
Sbjct: 868 LVDSEKGVSLRFPRFIRVREDK 889
>gi|346971415|gb|EGY14867.1| DNA ligase [Verticillium dahliae VdLs.17]
Length = 893
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 100/202 (49%), Gaps = 23/202 (11%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSD 116
S+ ++++++F E+++ EG+++K L S +EP RS WLK+K +Y+ G
Sbjct: 668 SMDGQELEQIQEFLDESVKASCEGLMVKMLDGTESGYEPSKRSRNWLKIKKDYLAGIGDS 727
Query: 117 LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTK 176
LD++++G Y+G G+R FL+A P+ + Y + C +GTG S+ L+ + +
Sbjct: 728 LDLVVLGAYHGKGKRTSVYGAFLLA-CYNPSGEVYE----TVCNIGTGFSEAVLEELHKQ 782
Query: 177 LKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIES----PEKSIILSITSDIRTIRSEVF 232
L E P FY + + +PDVW E K+ L+++ + E
Sbjct: 783 LS------EIVIDRPKPFYSHSAGGQHQPDVWFEPRYVWEVKTADLTLSPRYKAGAKEGV 836
Query: 233 SAP----YSLRFPRIDRVRYDK 250
SLRFPR ++R DK
Sbjct: 837 DPSGEKGISLRFPRFIKIRDDK 858
>gi|448446117|ref|ZP_21590603.1| DNA ligase I, ATP-dependent Dnl1 [Halorubrum saccharovorum DSM
1137]
gi|445684309|gb|ELZ36687.1| DNA ligase I, ATP-dependent Dnl1 [Halorubrum saccharovorum DSM
1137]
Length = 631
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 92/192 (47%), Gaps = 40/192 (20%)
Query: 83 EGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVLIIGGYYGSGRRGGEVAQFLVAL 142
EG++LK+ S + PGDR WLK KP+ LD ++IG +G GRR FL+ +
Sbjct: 476 EGVMLKNPESAYTPGDRGRDWLKRKPDV----ETLDAVVIGAEWGEGRRAELFGTFLLGV 531
Query: 143 AERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSK 202
R D F + +V TGL+DEEL + +L+P+ V+ +
Sbjct: 532 --RAGDD----EFATIGKVATGLTDEELADLTERLEPHV---------------VSEDGT 570
Query: 203 E---RPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQ 259
E RP+V +E ++I S T +S+ Y+LRFPR VR DK HD ++
Sbjct: 571 EIAIRPEVVLEVGYEAIQTSPT----------YSSGYALRFPRFVGVREDKSVHDADSLE 620
Query: 260 SFVELVHSSNGT 271
L + +GT
Sbjct: 621 RVTRL--AGDGT 630
>gi|156058660|ref|XP_001595253.1| hypothetical protein SS1G_03342 [Sclerotinia sclerotiorum 1980]
gi|154701129|gb|EDO00868.1| hypothetical protein SS1G_03342 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 805
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 147/314 (46%), Gaps = 29/314 (9%)
Query: 152 PRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQV--TNNSKERPDVWI 209
P + SF +VG G + ++ A+ + + K++ K P F ++ ++ KERPDVWI
Sbjct: 422 PMKCFSFFKVGGGFNADDYAAIRHQTDGKWIKWD-AKSPPTEFIELAGSHQEKERPDVWI 480
Query: 210 ESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSN 269
+ P+ SI++ + + +I S+ F ++LRFPR R+R DK W L ++ F+EL
Sbjct: 481 K-PDDSIVMEVKAASVSI-SDSFRTNFTLRFPRFKRLRPDKDWKSALSIEGFMEL----K 534
Query: 270 GTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFYF 329
++G E Q DK K R+S++ ++ V + V T +F M F
Sbjct: 535 AKVEEG-EDDEFQVDKKK--RNSKRLKRDKV--IAGTEDDGKVLYEGPTTGVFEGMDFCI 589
Query: 330 VN---VPPAYSLDSLHKMVVENGGTFSMNLNNSVTHCVAADNKGLKYEAAKRRG--DVIH 384
++ +P S L ++ NGG + + V AD + +K + + G +++
Sbjct: 590 LSDMILPVKKSKAELETIIKNNGGRIYQSPSAKEDIIVIADKRVVKVASLIKSGKINIVK 649
Query: 385 YSWVLDCCSQKKL----------LQLQPKYYLHLSDSSKKKLQEEVDEFSDLYFWDLDLA 434
WVL +Q ++ + + + L + +K+ + D++ D Y D+
Sbjct: 650 PQWVLHAVAQMEIDAKLGRSRFVIPYETGHMLFTREENKESIAANSDQYGDPYCRDVGPE 709
Query: 435 DIKQLLSNVDRSED 448
+++ ++ +D + D
Sbjct: 710 ELRGIMDGMDLNID 723
>gi|169607761|ref|XP_001797300.1| hypothetical protein SNOG_06940 [Phaeosphaeria nodorum SN15]
gi|160701485|gb|EAT85591.2| hypothetical protein SNOG_06940 [Phaeosphaeria nodorum SN15]
Length = 856
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 95/188 (50%), Gaps = 21/188 (11%)
Query: 73 FFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGS 128
+++++ EG+++K L S +EP RS WLK+K +Y+ G LD++++G Y+G
Sbjct: 645 LLEDSVKASCEGLMVKMLDGPESSYEPSKRSQNWLKVKKDYLAGVGDSLDLVVLGAYFGK 704
Query: 129 GRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPK 188
G+R FL+A P+T + + S C +GTG S+ L+ + +L E
Sbjct: 705 GKRTSWYGAFLLACYN---PNT--QNYESVCNIGTGFSEAILETLHEQLS------EIVI 753
Query: 189 RAPPSFYQVTNNSKERPDVWIES----PEKSIILSITSDIRTIRSEVFSA--PYSLRFPR 242
P FY + +K++PDVW E K+ L+++ R EV SLRFPR
Sbjct: 754 DKPKPFYTHSVGNKDQPDVWFEPRYVWEVKTADLTLSPRYRAAADEVSGGGKGISLRFPR 813
Query: 243 IDRVRYDK 250
+ R DK
Sbjct: 814 FIKERDDK 821
>gi|113195354|ref|YP_717484.1| DNA ligase [Taterapox virus]
gi|90660630|gb|ABD97743.1| DNA ligase [Taterapox virus]
Length = 552
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 100/205 (48%), Gaps = 15/205 (7%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLII 122
N ++ + + + EG+VLKD+ +EPG R +WLK+K +Y+ GS D++++
Sbjct: 360 NESQLTDVLDDALTRKLEGLVLKDINGVYEPGKR--RWLKIKRDYLNEGSMADSADLVVL 417
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
G YYG G +GG +A FL+ + ++ + ++ C +G D L + +L +
Sbjct: 418 GAYYGKGAKGGIMAVFLMGCYD---DESGKWKTVTKC---SGHDDNTLRVLQDQL-TMVK 470
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
+ PK+ P + N PD +E P++S I I+ T + S+RFPR
Sbjct: 471 INKDPKKIPE---WLVVNKIYIPDFVVEDPKQSQIWEISGAEFTPSKSHTANGISIRFPR 527
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHS 267
R+R DK W + + V L S
Sbjct: 528 FTRIREDKTWKESTHLNDLVNLTKS 552
>gi|44971522|gb|AAS49872.1| RPXV159 [Rabbitpox virus]
Length = 552
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 100/205 (48%), Gaps = 15/205 (7%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLII 122
N ++ + + + EG+VLKD+ +EPG R +WLK+K +Y+ GS D++++
Sbjct: 360 NESQLTDVLDDALTRKLEGLVLKDINGVYEPGKR--RWLKIKRDYLNEGSMADSADLVVL 417
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
G YYG G +GG +A FL+ + ++ + ++ C +G D L + +L +
Sbjct: 418 GAYYGKGAKGGIMAVFLMGCYD---DESGKWKTVTKC---SGHDDNTLRELQDQL-TMIK 470
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
+ PK+ P + N PD +E P++S I I+ T + S+RFPR
Sbjct: 471 INKDPKKIPE---WLVVNKIYIPDFVVEDPKQSQIWEISGAEFTSSKSHTANGISIRFPR 527
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHS 267
R+R DK W + + V L S
Sbjct: 528 FTRIREDKTWKESTHLNDLVNLTKS 552
>gi|171686862|ref|XP_001908372.1| hypothetical protein [Podospora anserina S mat+]
gi|170943392|emb|CAP69045.1| unnamed protein product [Podospora anserina S mat+]
Length = 957
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 100/203 (49%), Gaps = 27/203 (13%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSD 116
S+ +DE++ F E+++ EG+++K L S +EP RS WLK +Y+ G
Sbjct: 734 SMNGQELDEIQTFLDESVKASCEGLMVKMLDGEESGYEPSKRSRNWLK--KDYLAGIGDS 791
Query: 117 LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTK 176
LD++++G Y+G G+R FL+A P D Y + C +GTG S +AV+ +
Sbjct: 792 LDLVVLGAYFGKGKRTSVYGAFLLA-CYNPGTDMYE----TVCNIGTGFS----EAVLEE 842
Query: 177 LKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE-----KSIILSITSDIRTIRSE- 230
L K + P FY ++ + +PDVW E P+ K+ L+++ + E
Sbjct: 843 LHAQLSKITIDR--PKPFYAHSSGGQHQPDVWFE-PKYVWEVKTADLTLSPRYKAGMKEG 899
Query: 231 ---VFSAPYSLRFPRIDRVRYDK 250
SLRFPR +VR DK
Sbjct: 900 VDPTGEKGISLRFPRFIKVRDDK 922
>gi|22671504|gb|AAN04331.1|AF451898_35 DNA ligase III [Heliothis zea virus 1]
Length = 1411
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 99/193 (51%), Gaps = 15/193 (7%)
Query: 74 FKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIR-AGSDLDVLIIGGYYGSGRRG 132
FK+ + EG++LK S + PG R +WLK+K +Y + +G D++I+G +YG+GR G
Sbjct: 1210 FKQCMRLNMEGLMLKCANSCYMPGKR--RWLKMKRDYFKNSGDTADLVILGAWYGTGRLG 1267
Query: 133 GEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPP 192
G ++ FL+ + D ++ +V GL+D ++ + L+P + P
Sbjct: 1268 GLLSVFLMGCLDG---DCVEPTWVGLTKVHAGLNDVQIKQLNDILEP-LMVHSAAMDVPW 1323
Query: 193 SFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPW 252
F V +S++ P + P++ +L + + +E+ +A S RFPR+ R+R DK W
Sbjct: 1324 RFVNVK-DSRKLPTMIALDPKQMPVLEV------LCTEL-TASLSFRFPRVIRIRSDKDW 1375
Query: 253 HDCLDVQSFVELV 265
++ EL
Sbjct: 1376 TGVTSLRYIKELA 1388
>gi|149248698|ref|XP_001528736.1| ATP-dependent DNA ligase [Lodderomyces elongisporus NRRL YB-4239]
gi|146448690|gb|EDK43078.1| ATP-dependent DNA ligase [Lodderomyces elongisporus NRRL YB-4239]
Length = 990
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 160/356 (44%), Gaps = 43/356 (12%)
Query: 63 VAHNVDEVEKFFKETIENRDEGIVLKDLGSKWE-PGDRSGKWLKLKPEYIRA-GSDLDVL 120
+ ++E+ +E + +R EG+VLK K+ G R+ W+K+KPEY+ G +LD++
Sbjct: 476 LGSTAQDIERAIREVVTSRSEGLVLKHTQLKYVIDGFRNPNWIKVKPEYLETFGENLDLV 535
Query: 121 IIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPY 180
+IG + ++V L Y SF + G EE D + + +
Sbjct: 536 VIG------KNPATKNSYMVGLCNADDGSYY-----SFAMIANGFEVEEYDKI--ERLTH 582
Query: 181 FRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIR-SEVFSAPYSLR 239
+ + KR PP + K++P WI +P+ S++L + + +R E ++ SL
Sbjct: 583 NKWIDCQKRLPPE--SIIKFGKKKPVYWI-NPKDSVVLEVKARSIDVRPEETYAVGSSLH 639
Query: 240 FPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKN 299
R+R DK ++CL +Q + +L + + + ++RK +K +
Sbjct: 640 GNFCRRIREDKAVNECLTLQEYKKLKAEYSKNLHRPQT-------------AARKRDKWS 686
Query: 300 VSIVPSH---FLQTDVSDIKGETSIFSDMVFYFVNVP-----PAYSLDSLHKMVVENGGT 351
VS + S F + IK E+ +F F ++ +++ L +V GG
Sbjct: 687 VSALGSFDDPFALQKLKKIKLESDLFFPFEFLIMSDKRSPNNEVITVEELKALVKRYGGK 746
Query: 352 FSMNLNN-SVTHCVAADNKGLKYEA--AKRRGDVIHYSWVLDCCSQKKLLQLQPKY 404
+++ S +A K L + K+ D++ SW+L+C + +++Q++P +
Sbjct: 747 VVNSVDGKSAQQLIAITEKELPVSSRLLKQGIDLVKPSWILECIKRNQIMQIEPHF 802
>gi|193700124|ref|XP_001943689.1| PREDICTED: DNA ligase 3-like [Acyrthosiphon pisum]
Length = 875
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 106/211 (50%), Gaps = 16/211 (7%)
Query: 65 HNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLI 121
HN E++ + ++ EG+VLKDL +EPG R W K+K +Y+ GS D+++
Sbjct: 516 HNTKELKLMVEHVLKQGLEGLVLKDLTGVYEPGKRH--WQKIKKDYLFDGSMADSADLVV 573
Query: 122 IGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYF 181
+G ++G+G +GG ++ FL+ +++ + +V G D+ L+ + +LK
Sbjct: 574 LGAWFGTGNKGGMMSIFLMGCYNEAK-----KKWCTVTKVHGGHDDKTLERLQGELK-MI 627
Query: 182 RKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA-PYSLRF 240
+ + P++ P + + T PD E P+K + I S ++EV +A S+RF
Sbjct: 628 KISKDPEKV-PEWLKCTKTM--IPDFVAEDPKKMPVWEI-SGAEFSQAEVHTANGISIRF 683
Query: 241 PRIDRVRYDKPWHDCLDVQSFVELVHSSNGT 271
PR+ ++R DK W + L +S T
Sbjct: 684 PRVTKIRNDKDWKTATSLTELQNLYEASKET 714
>gi|332020242|gb|EGI60678.1| DNA ligase 3 [Acromyrmex echinatior]
Length = 775
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 96/206 (46%), Gaps = 14/206 (6%)
Query: 83 EGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGGEVAQFL 139
EG+VLKD+ SK+EPG R WLK+K +Y+ G+ D++++G +YG+G +GG ++ FL
Sbjct: 342 EGLVLKDIDSKYEPGKRH--WLKVKKDYLCGGAMADSADLVVLGAWYGTGNKGGMLSVFL 399
Query: 140 VALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTN 199
+ D ++++ +V TG D A +T L+ + K +
Sbjct: 400 MGCY-----DERRDKWLTVTKVHTGHDD----ATLTMLQDQLDMVKIGKDVEKLPNWLHA 450
Query: 200 NSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQ 259
PD + P+K + IT T + + S+RFPR+ R+R+DK W +
Sbjct: 451 KKPMVPDFVAKDPKKQPVWEITGAEFTNQGMHTADGISIRFPRVTRIRHDKDWSTATTLD 510
Query: 260 SFVELVHSSNGTTQKGKEYGGLQDDK 285
L T G+ L D K
Sbjct: 511 ELRVLFKRKPETVDFGRLLDTLTDVK 536
>gi|18312215|ref|NP_558882.1| ATP-dependent DNA ligase [Pyrobaculum aerophilum str. IM2]
gi|14423669|sp|O93723.2|DNLI_PYRAE RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|18159655|gb|AAL63064.1| DNA ligase [Pyrobaculum aerophilum str. IM2]
Length = 584
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 108/239 (45%), Gaps = 17/239 (7%)
Query: 39 VYMLSQLRSQIMAADQTGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGD 98
+Y +L + D+ W + N + V+ FF E++ EG++ K S +E G
Sbjct: 357 IYRRVRLSEIVCETDKVSIAKWRIF-DNAEAVDVFFHESVSMGTEGLICKSPSSIYEMGA 415
Query: 99 RSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFIS 157
R W+K K +Y D +D++++G ++G G+R G FL+A A P+ D F +
Sbjct: 416 RGWNWIKYKRDYRSEMIDTVDLVVVGAFHGRGKRAGLYGAFLLA-AYDPSTDM----FYT 470
Query: 158 FCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSII 217
C+VG+G +D +L + L+P ++ P R P ++ + P V IE I
Sbjct: 471 VCKVGSGFTDADLKKMYEILQP----FKIPHRHPRVVSKMEADVWFVPQVVIEVIGAEIT 526
Query: 218 LSI--TSDIRTIRSEVFSAPYSLRFPRI-DRVRYDKPWHDCLDVQSFVELVHSSNGTTQ 273
LS T + +R V A +RFPR R R DK V +EL Q
Sbjct: 527 LSPLHTCCLGAVRPGVGLA---VRFPRFTGRYRSDKSPEQATTVAEMLELYKRQKKVVQ 582
>gi|4099066|gb|AAD00532.1| DNA ligase [Pyrobaculum aerophilum str. IM2]
Length = 589
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 107/230 (46%), Gaps = 17/230 (7%)
Query: 39 VYMLSQLRSQIMAADQTGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGD 98
+Y +L + D+ W + N + V+ FF E++ EG++ K S +E G
Sbjct: 362 IYRRVRLSEIVCETDKVSIAKWRIF-DNAEAVDVFFHESVSMGTEGLICKSPSSIYEMGA 420
Query: 99 RSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFIS 157
R W+K K +Y D +D++++G ++G G+R G FL+A A P+ D F +
Sbjct: 421 RGWNWIKYKRDYRSEMIDTVDLVVVGAFHGRGKRAGLYGAFLLA-AYDPSTDM----FYT 475
Query: 158 FCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSII 217
C+VG+G +D +L + L+P ++ P R P ++ + P V IE I
Sbjct: 476 VCKVGSGFTDADLKKMYEILQP----FKIPHRHPRVVSKMEADVWFVPQVVIEVIGAEIT 531
Query: 218 LSI--TSDIRTIRSEVFSAPYSLRFPRI-DRVRYDKPWHDCLDVQSFVEL 264
LS T + +R V A +RFPR R R DK V +EL
Sbjct: 532 LSPLHTCCLGAVRPGVGLA---VRFPRFTGRYRSDKSPEQATTVAEMLEL 578
>gi|310793139|gb|EFQ28600.1| DNA ligase I [Glomerella graminicola M1.001]
Length = 887
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 124/282 (43%), Gaps = 65/282 (23%)
Query: 6 FAQLMTLSVLHDKDNACNISTVAMNDGICVCVHVYMLSQLRSQIMA----------ADQT 55
F QLMT K I V + VCV + L L Q + +
Sbjct: 599 FQQLMT-----RKKKDVKIEDVKVK----VCVFAFDLLYLNGQAIVEKSLRERRELLENA 649
Query: 56 GEPC---WSLVAH----NVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLK 105
EP +S H +++++ F E+++ EG+++K L S +EP RS WLK
Sbjct: 650 FEPVEGEFSFATHMNGQELEQIQVFLDESVKASCEGLMVKMLDGTESGYEPSKRSRNWLK 709
Query: 106 LKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTG 164
+K +Y+ G LD++++G YYG G+R FL+A P+ ++Y + C +GTG
Sbjct: 710 IKKDYLSGIGDSLDLVVLGAYYGKGKRTSVYGAFLLA-CYNPSSESYE----TVCNIGTG 764
Query: 165 LSD---EEL-----DAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIES----P 212
S+ EEL D V+ + KP FY ++ + +PDVW E
Sbjct: 765 FSEAVLEELHKQLSDIVIDRPKP--------------FYAHSSGGQHQPDVWFEPRYVWE 810
Query: 213 EKSIILSITSDIRTIRSEVFSA----PYSLRFPRIDRVRYDK 250
K+ L+++ + E SLRFPR +VR DK
Sbjct: 811 VKTADLTLSPRYKAGCKEGVDPGGEKGISLRFPRFIKVRDDK 852
>gi|147767218|emb|CAN66728.1| hypothetical protein VITISV_041957 [Vitis vinifera]
Length = 272
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 106/214 (49%), Gaps = 30/214 (14%)
Query: 66 NVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLII 122
+ ++ F +E + EGI++K D+ + + P R+ WLK+K +Y+ +D LD++ I
Sbjct: 66 TLTKINLFLEEAFRSSCEGIMIKSLDIDAGYSPSKRTDTWLKVKRDYVEGLNDSLDLVPI 125
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
G ++G+GR+ G + FL+A PDT F S CRV +G SD ++K +F
Sbjct: 126 GAWHGNGRKAGWYSPFLMACYN---PDT--EEFQSVCRVMSGFSDN----FYKEMKEFFN 176
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP------- 235
+ + + PP +YQ + E PD+W +PE +I I T+ S V A
Sbjct: 177 EDKILSKKPP-YYQ----TAELPDMWF-TPE--LIWEIRGADFTV-SPVHQAAIGLVHPS 227
Query: 236 --YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 267
S+RFPR R D+ +C ++ HS
Sbjct: 228 RGISVRFPRFIRPIMDRRPEECSTAADIADMFHS 261
>gi|431890909|gb|ELK01788.1| DNA ligase 3 [Pteropus alecto]
Length = 909
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 103/212 (48%), Gaps = 24/212 (11%)
Query: 63 VAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDV 119
V+ VD + + +E +E G+VLKD+ +EPG R WLK+K +Y+ G+ D+
Sbjct: 537 VSDLVDMINRVIREGLE----GLVLKDVKGTYEPGKRH--WLKVKKDYLNEGAMADTADL 590
Query: 120 LIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 179
+++G +YG G +GG ++ FL+ Y +C V T S DA + +L+
Sbjct: 591 VVLGAFYGQGSKGGMMSIFLMG--------CYDPSSQKWCTV-TKCSGGHDDATLARLQK 641
Query: 180 YFRKYEYPKRAP--PSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA-PY 236
+ K PS+ ++ N PD + P+K+ + IT +SE +A
Sbjct: 642 ELDMVKISKDPSKIPSWLKI--NKIYYPDFIVPDPKKAAVWEITG-AEFSKSEAHTADGI 698
Query: 237 SLRFPRIDRVRYDKPWHDCLDVQSFVELVHSS 268
S+RFPR R+R+DK W ++ EL S
Sbjct: 699 SIRFPRCTRIRHDKDWKSATNLPKLKELYQLS 730
>gi|347524512|ref|YP_004782082.1| DNA ligase I, ATP-dependent Dnl1 [Pyrolobus fumarii 1A]
gi|343461394|gb|AEM39830.1| DNA ligase I, ATP-dependent Dnl1 [Pyrolobus fumarii 1A]
Length = 609
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 110/218 (50%), Gaps = 27/218 (12%)
Query: 59 CWSLVAH----NVDEVEKFFKETIENRDEGIVLKDLGSK--WEPGDRSGKWLKLKPEYIR 112
W L H +E+E+FF IE+ EG++ K + S+ ++ G R W+K K +Y
Sbjct: 389 TWRLAEHIYTDKPEELEQFFLRAIEDGAEGVMAKAVHSRSIYQAGARGWLWIKYKRDYKS 448
Query: 113 AGSD-LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELD 171
D +D++++G +YG GRRGG+ L+A A P DT F + C+VG+G +DE+L+
Sbjct: 449 EMIDTVDLVVVGAFYGKGRRGGKFGALLMA-AYDPDTDT----FKTVCKVGSGFTDEDLE 503
Query: 172 AVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEV 231
+ LKPY +++P+ +SK +PDVW++ + I+ + I +
Sbjct: 504 RLNEMLKPYIIPHKHPR----------VDSKMKPDVWVQPALVAEIIGAELTLSPIHTCC 553
Query: 232 F-----SAPYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
A S+RFPR R R DK D + E+
Sbjct: 554 HGWVKPGAGISIRFPRFIRWRPDKSPEDATTTKELYEM 591
>gi|379005375|ref|YP_005261047.1| DNA ligase I [Pyrobaculum oguniense TE7]
gi|375160828|gb|AFA40440.1| DNA ligase I, ATP-dependent (dnl1) [Pyrobaculum oguniense TE7]
Length = 584
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 108/230 (46%), Gaps = 17/230 (7%)
Query: 39 VYMLSQLRSQIMAADQTGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGD 98
+Y +L + +D+ W L+ + D V+ FF E + EG++ K S++E G
Sbjct: 357 IYRRVKLSEIVQESDKVQIAKW-LMLDDPDSVDVFFHEAVSVGTEGLICKSPTSEYEMGA 415
Query: 99 RSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFIS 157
R W+K K +Y D +D++++G +YG G+R G FL+A A P+ D F +
Sbjct: 416 RGWNWIKYKRDYKSEMIDTVDLVVVGAFYGRGKRAGLYGAFLLA-AYDPSSDM----FYT 470
Query: 158 FCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSII 217
C+VG+G +D +L + L+P + P R P ++ + P V IE I
Sbjct: 471 VCKVGSGFTDADLKKMYEILQP----LKIPHRHPRVSSKMEADVWFVPQVVIEVIGAEIT 526
Query: 218 LSI--TSDIRTIRSEVFSAPYSLRFPRI-DRVRYDKPWHDCLDVQSFVEL 264
LS T + +R V A +RFPR R R DK V +EL
Sbjct: 527 LSPLHTCCLGAVRPGVGLA---VRFPRFTGRYRTDKGPEQATTVAEMLEL 573
>gi|350407883|ref|XP_003488227.1| PREDICTED: DNA ligase 3-like [Bombus impatiens]
Length = 1012
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 114/241 (47%), Gaps = 21/241 (8%)
Query: 20 NACNISTVAMNDGICVCVHVYMLSQLRSQIMAADQTGEPCWSLVA-----HNVDEVEKFF 74
NAC + V +H M+ R QI+ T P +++ + ++ +
Sbjct: 510 NACLFVFDCIYYNGVVLLHKSMME--RRQILRESMTEIPNRIMLSEIKEVYKSQDLAEMI 567
Query: 75 KETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRR 131
++ EG+VLKD+ SK+EPG R WLK+K +Y+ G+ D++++G +YG+G +
Sbjct: 568 ARVLKMGLEGLVLKDIHSKYEPGKRH--WLKVKKDYLYDGAMADSADLVVLGAWYGTGNK 625
Query: 132 GGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAP 191
GG ++ FL+ + + +++ +V TG D L + +L + + P + P
Sbjct: 626 GGMMSVFLMGCYDEDRGN-----WVTVTKVHTGHDDATLVMLQDELD-MIKISKDPAKVP 679
Query: 192 PSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKP 251
+ N PD + P+K + IT T + + S+RFPR+ R+R DK
Sbjct: 680 S---WLRANKPMIPDFVAKDPKKQPVWEITGAEFTNQGVHTADGISIRFPRVTRIRSDKD 736
Query: 252 W 252
W
Sbjct: 737 W 737
>gi|148683723|gb|EDL15670.1| ligase III, DNA, ATP-dependent, isoform CRA_b [Mus musculus]
Length = 953
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 101/206 (49%), Gaps = 20/206 (9%)
Query: 67 VDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIG 123
D + + +E +E G+VLKD+ +EPG R WLK+K +Y+ G+ D++++G
Sbjct: 645 ADMINRVIREGLE----GLVLKDVKGTYEPGKRH--WLKVKKDYLNEGAMADTADLVVLG 698
Query: 124 GYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRK 183
+YG G +GG ++ FL+ + PD+ +++ + + G D L + +L K
Sbjct: 699 AFYGQGSKGGMMSIFLMGCYD---PDS--QKWCTVTKCAGGHDDATLARLQKEL--VMVK 751
Query: 184 YEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA-PYSLRFPR 242
PS+ ++ N PD + P+K+ + IT RSE +A S+RFPR
Sbjct: 752 ISKDPSKIPSWLKI--NKIYYPDFIVPDPKKAAVWEITG-AEFSRSEAHTADGISIRFPR 808
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSS 268
R+R DK W ++ EL S
Sbjct: 809 CTRIRDDKDWKSATNLPQLKELYQLS 834
>gi|334324598|ref|XP_001373823.2| PREDICTED: DNA ligase 3 [Monodelphis domestica]
Length = 1217
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 104/210 (49%), Gaps = 20/210 (9%)
Query: 63 VAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDV 119
+H + + + +E +E G+VLKD+ +EPG R WLK+K +Y+ G+ D+
Sbjct: 641 ASHLANMINRVIREGLE----GLVLKDVKGTYEPGKR--HWLKVKKDYLNEGAMADTADL 694
Query: 120 LIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 179
+++G +YG G +GG ++ FL+ D +++ + + G D L + +L
Sbjct: 695 VVLGAFYGQGNKGGMMSIFLMGCY-----DPSSKKWCTVTKCSGGHDDATLARLQNELD- 748
Query: 180 YFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA-PYSL 238
+ + P + P S+ ++ N PD + P+K+ + IT ++E +A S+
Sbjct: 749 MVKISKDPSKIP-SWLKINKN--YYPDFIVPDPKKAPVWEITG-AEFSKAEAHTADGISI 804
Query: 239 RFPRIDRVRYDKPWHDCLDVQSFVELVHSS 268
RFPR R+R DK W ++ EL H S
Sbjct: 805 RFPRCTRIRDDKDWKSATNLPQLKELYHLS 834
>gi|346644723|ref|NP_001231032.1| DNA ligase 3 [Sus scrofa]
Length = 995
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 102/206 (49%), Gaps = 20/206 (9%)
Query: 67 VDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIG 123
VD + + +E +E G+VLKD+ +EPG R WLK+K +Y+ G+ D++++G
Sbjct: 643 VDMINRVIREGLE----GLVLKDVKGTYEPGKRH--WLKVKKDYLNEGAMADTADLVVLG 696
Query: 124 GYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRK 183
+YG G +GG ++ FL+ D +++ + + G D L + T+L +
Sbjct: 697 AFYGQGSKGGMMSIFLMGCY-----DPSSQKWCTVTKCAGGHDDATLARLQTELD-MVKI 750
Query: 184 YEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA-PYSLRFPR 242
+ P + P + ++ N PD + P+K+ + IT RSE +A S+RFPR
Sbjct: 751 SKDPSKIP-GWLKI--NKIYYPDFIVPDPKKAAVWEITG-AEFSRSEAHTADGISIRFPR 806
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSS 268
R+R DK W ++ EL S
Sbjct: 807 CTRIRDDKDWKSATNLPQLKELYQLS 832
>gi|255724178|ref|XP_002547018.1| ATP-dependent DNA ligase [Candida tropicalis MYA-3404]
gi|240134909|gb|EER34463.1| ATP-dependent DNA ligase [Candida tropicalis MYA-3404]
Length = 937
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 92/388 (23%), Positives = 171/388 (44%), Gaps = 52/388 (13%)
Query: 69 EVEKFFKETIENRDEGIVLKDLGSKWE-PGDRSGKWLKLKPEYI-RAGSDLDVLIIGGYY 126
++E+ +E + +R EG+VLK++ SK+ G R+ W+K+KPEY+ + G +LD+++IG
Sbjct: 464 DIERAIREVVSSRSEGLVLKNVQSKYAIDGFRNPDWIKVKPEYLEKFGENLDLVVIG--- 520
Query: 127 GSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAV--VTKLKPYFRKY 184
+ ++ L Y SFC G+ +E D + +T K
Sbjct: 521 ---KIPAIKNSYMCGLKSSVDGVYY-----SFCVCANGIEIDEFDKIERITHGKWIKTDD 572
Query: 185 EYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITS-DIRTIRSEVFSAPYSLRFPRI 243
E P + F + P WI P+ S++L I + I + + ++ +L
Sbjct: 573 EMPPESLIKF------GTKLPTYWIH-PKDSLVLEIRARSIDARKEKTYAVGTTLHCNHC 625
Query: 244 DRVRYDKPWHDCLDVQSFVEL-VHSSNGTTQKGKEYG---GLQDDKPKQFRSSRKGEKKN 299
++R DKP +C+ +++++E+ + SN + G GL D + S K K
Sbjct: 626 RKIRDDKPIDECITLENYLEMKANYSNDLSHAQNALGKKRGLSDSFNEG--PSLKKTKVE 683
Query: 300 VSIVPSH--FLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTF--SMN 355
+ + +D + G+++ S+D L MV + GG S++
Sbjct: 684 FDLFEGFEFLIMSDKKEANGDST----------------SIDELKIMVKKYGGKVVNSID 727
Query: 356 LNNSVTHCVAADNKGLKYEAAKRRG-DVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKK 414
+ ++ V + RG D+I W+++C +++K+LQL+P Y + + +
Sbjct: 728 VRTNMQIIVITEKDLPVCNKYLLRGLDLIKPCWIMECIARRKILQLEP--YFIYATGNWE 785
Query: 415 KLQEEVDEFSDLYFWDLDLADIKQLLSN 442
K Q D + D Y L + LSN
Sbjct: 786 KFQHMADRYGDSYIIHQPLNIVVPNLSN 813
>gi|344234527|gb|EGV66395.1| ATP-dependent DNA ligase [Candida tenuis ATCC 10573]
Length = 903
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 162/370 (43%), Gaps = 53/370 (14%)
Query: 69 EVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYG 127
++E K I +R EGI++K+ SK+ R W+K+KPEY+ + G +LD+++IG G
Sbjct: 432 DIENAVKGVIVDRSEGIMVKNTMSKYHVAKRDNSWIKVKPEYLESFGENLDLVVIGVLPG 491
Query: 128 SGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYP 187
++ L DT + SFC V G ++EE + +K +
Sbjct: 492 IKN------SYMCGLY-----DTETHMWRSFCTVANGFTNEEFAELDRLMK------DKL 534
Query: 188 KRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRS-EVFSAPYSLRFPRIDRV 246
R P + +P ++ +PE+S++L I + + R+ E ++ +LR +
Sbjct: 535 SRVCPENVMF---GRRKPQYYL-NPEESVVLEIKARVYDQRTDETYATNTTLRNLYCRGI 590
Query: 247 RYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSH 306
R+DK W DC+ QS+ E + + K+ QD +++ K S +
Sbjct: 591 RHDKSWDDCISYQSYEE------QRSDRTKDIYETQD-------VNKRRRVKEESFTETT 637
Query: 307 FLQTDVSDIKGETSIFSDMVFYFVN------VPPAYSLDSLHKMVVENGGTF--SMNLNN 358
F + ++K +F D F ++ SL+SL ++ + GG S + +
Sbjct: 638 FRE----NMKANMELFKDYRFVVLSDKLDQVENMRISLESLKNLIKKFGGEIITSPSYSK 693
Query: 359 SVTHCVAADNKGLKYEAAKRRG-DVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQ 417
S V ++ + A G D++H +W+ C K++ ++ SK K+
Sbjct: 694 SKPCLVISEKLTPRCRAYVELGLDIVHPNWLFYCIEYGKIIPMECLTVFE----SKNKVP 749
Query: 418 EEVDEFSDLY 427
E DE+ D +
Sbjct: 750 ENFDEYGDSF 759
>gi|225684244|gb|EEH22528.1| DNA ligase [Paracoccidioides brasiliensis Pb03]
Length = 847
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 81/149 (54%), Gaps = 15/149 (10%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLI 121
+++E++ E+++ EG+++K L S +EP RS WLK+K +Y+ G LD+++
Sbjct: 687 DLEEIQTLLDESVKASCEGLMVKMLDTEESGYEPSKRSRNWLKVKKDYLAGIGDSLDLVV 746
Query: 122 IGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYF 181
+G YYG G+R FL+A A P Y + C +GTG S+ L+ + + L P
Sbjct: 747 LGAYYGRGKRTSVYGAFLLA-AYNPTTQNYE----TICNIGTGFSEALLEELHSALSPLV 801
Query: 182 RKYEYPKRAPPSFYQVTNNSKERPDVWIE 210
+ PK FY ++ K++PDVW E
Sbjct: 802 --IDRPK----PFYDHSSVPKDQPDVWFE 824
>gi|58865590|ref|NP_001012011.1| DNA ligase 3 [Rattus norvegicus]
gi|55249814|gb|AAH85959.1| Ligase III, DNA, ATP-dependent [Rattus norvegicus]
Length = 943
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 101/208 (48%), Gaps = 24/208 (11%)
Query: 67 VDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIG 123
D + + +E +E G+VLKD+ +EPG R WLK+K +Y+ G+ D++++G
Sbjct: 645 ADMINRVIREGLE----GLVLKDVKGTYEPGKRH--WLKVKKDYLNEGAMADTADLVVLG 698
Query: 124 GYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRK 183
+YG G +GG ++ FL+ + PD+ ++ C G DA + +L+
Sbjct: 699 AFYGQGSKGGMMSIFLMGCYD---PDSQKWCTVTKCAGGHD------DATLARLQKELDM 749
Query: 184 YEYPKRAP--PSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA-PYSLRF 240
+ K PS+ ++ N PD + P+K+ + IT RSE +A S+RF
Sbjct: 750 VKISKDPSKIPSWLKI--NKIYYPDFIVPDPKKAAVWEITG-AEFSRSEAHTADGISIRF 806
Query: 241 PRIDRVRYDKPWHDCLDVQSFVELVHSS 268
PR R+R DK W ++ EL S
Sbjct: 807 PRCTRIRDDKDWKSATNLPQLKELYQLS 834
>gi|242034121|ref|XP_002464455.1| hypothetical protein SORBIDRAFT_01g018700 [Sorghum bicolor]
gi|241918309|gb|EER91453.1| hypothetical protein SORBIDRAFT_01g018700 [Sorghum bicolor]
Length = 905
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 90/168 (53%), Gaps = 20/168 (11%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRA-GSDL 117
++ +++++E++KF + + EG+++K L + +EP RS WLKLK +Y+ + G L
Sbjct: 715 AITSNDLEEIQKFLDTAVNSSCEGLIIKTLDKDATYEPAKRSNNWLKLKKDYMDSIGDSL 774
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D++ I +YG G+R G FL+A D + + C +GTG S+++L+ L
Sbjct: 775 DLVPIAAFYGRGKRTGVFGSFLLACY-----DEQNEEYQTICNIGTGFSEQQLEERSASL 829
Query: 178 KPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSIT 221
+ + E PK ++Y+ + PDVW E E K+ LSI+
Sbjct: 830 RS--KVIEKPK----AYYRFADTMD--PDVWFEPSEVWEVKAADLSIS 869
>gi|340721941|ref|XP_003399371.1| PREDICTED: LOW QUALITY PROTEIN: DNA ligase 3-like [Bombus
terrestris]
Length = 1013
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 90/173 (52%), Gaps = 14/173 (8%)
Query: 83 EGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGGEVAQFL 139
EG+VLKD+ SK+EPG R WLK+K +Y+ G+ D++++G +YG+G +GG ++ FL
Sbjct: 577 EGLVLKDIHSKYEPGKRH--WLKVKKDYLYDGAMADSADLVVLGAWYGTGNKGGMMSVFL 634
Query: 140 VALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTN 199
+ + + +++ +V TG D L + +L + + P + P +
Sbjct: 635 MGCYDEDRGN-----WVTVTKVHTGHDDATLAMLQDELD-MIKIGKDPAKVP---TWLRA 685
Query: 200 NSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPW 252
N PD + P+K + IT T + + S+RFPR+ R+R DK W
Sbjct: 686 NKPMIPDFVAKDPKKQPVWEITGAEFTNQGVHTADGISIRFPRVTRIRSDKDW 738
>gi|237840681|ref|XP_002369638.1| DNA ligase 1 precursor, putative [Toxoplasma gondii ME49]
gi|211967302|gb|EEB02498.1| DNA ligase 1 precursor, putative [Toxoplasma gondii ME49]
gi|221503354|gb|EEE29052.1| DNA ligase 1 precursor, putative [Toxoplasma gondii VEG]
Length = 1112
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 100/216 (46%), Gaps = 39/216 (18%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLII 122
+ E F E IE EG+++K L + +EP RS WLK+K +Y+ +D +D++ I
Sbjct: 882 GAQDFEDFLTEAIEGNCEGLMVKTLRENATYEPSKRSLNWLKVKKDYVDGLTDSVDLVPI 941
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEEL--------DAVV 174
G YG G+R G +L+A+ PA +T F + C+ TG S+E L D ++
Sbjct: 942 GACYGKGKRSGTFGTYLLAVYN-PADET----FQTVCKAATGFSEEALQQHHKALSDRII 996
Query: 175 TKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRT--IR 228
+ KPY Y V+ K DVW E+ + ++ LSI S + T I
Sbjct: 997 SHKKPY--------------YDVS--PKLEADVWFEACQVWECRAADLSI-SPVHTAGIG 1039
Query: 229 SEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
+ LRFPR RVR DK VE+
Sbjct: 1040 EKSPDKGIGLRFPRFLRVREDKNPEQATTSTQIVEM 1075
>gi|260841228|ref|XP_002613830.1| hypothetical protein BRAFLDRAFT_119901 [Branchiostoma floridae]
gi|229299220|gb|EEN69839.1| hypothetical protein BRAFLDRAFT_119901 [Branchiostoma floridae]
Length = 928
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 101/200 (50%), Gaps = 16/200 (8%)
Query: 77 TIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGG 133
I + EG+VLKD S +EPG R WLK+K +Y+ G+ D++++G +YG+G +GG
Sbjct: 558 VIRDGLEGLVLKDTKSIYEPGKRH--WLKVKKDYLEQGAMADTADLVVLGAFYGTGNKGG 615
Query: 134 EVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPS 193
+ FL+ + + PD+ ++ + + G G D + + +L K P
Sbjct: 616 LKSVFLMGVYD---PDS--DKWCTVTKCGNGHDDNTIAKLNKELA--MVKISKDMSKVPK 668
Query: 194 FYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA-PYSLRFPRIDRVRYDKPW 252
+ ++T N PD P+K+ + IT +SE +A S+RFPR+ ++R DK W
Sbjct: 669 WLKITKNL--VPDFVCADPKKAPVWEITG-AEFSKSEAHTADGISIRFPRVTKIRDDKDW 725
Query: 253 HDCLDVQSFVELVHSSNGTT 272
+++ L +S T+
Sbjct: 726 KSATNLKQLKHLFKTSKETS 745
>gi|149053629|gb|EDM05446.1| rCG33581, isoform CRA_a [Rattus norvegicus]
Length = 956
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 104/206 (50%), Gaps = 20/206 (9%)
Query: 67 VDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIG 123
D + + +E +E G+VLKD+ +EPG R WLK+K +Y+ G+ D++++G
Sbjct: 645 ADMINRVIREGLE----GLVLKDVKGTYEPGKRH--WLKVKKDYLNEGAMADTADLVVLG 698
Query: 124 GYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRK 183
+YG G +GG ++ FL+ + PD+ +++ + + G D L A + K +
Sbjct: 699 AFYGQGSKGGMMSIFLMGCYD---PDS--QKWCTVTKCAGGHDDATL-ARLQKELDMVKI 752
Query: 184 YEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA-PYSLRFPR 242
+ P + P S+ ++ N PD + P+K+ + IT RSE +A S+RFPR
Sbjct: 753 SKDPSKIP-SWLKI--NKIYYPDFIVPDPKKAAVWEITG-AEFSRSEAHTADGISIRFPR 808
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSS 268
R+R DK W ++ EL S
Sbjct: 809 CTRIRDDKDWKSATNLPQLKELYQLS 834
>gi|221482854|gb|EEE21185.1| DNA ligase 1 precursor, putative [Toxoplasma gondii GT1]
Length = 1119
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 100/213 (46%), Gaps = 39/213 (18%)
Query: 69 EVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGY 125
+ E F E IE EG+++K L + +EP RS WLK+K +Y+ +D +D++ IG
Sbjct: 892 DFEDFLTEAIEGNCEGLMVKTLRENATYEPSKRSLNWLKVKKDYVDGLTDSVDLVPIGAC 951
Query: 126 YGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEEL--------DAVVTKL 177
YG G+R G +L+A+ PA +T F + C+ TG S+E L D +++
Sbjct: 952 YGKGKRSGTFGTYLLAVYN-PADET----FQTVCKAATGFSEEALQQHHKALSDRIISHK 1006
Query: 178 KPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRT--IRSEV 231
KPY Y V+ K DVW E+ + ++ LSI S + T I +
Sbjct: 1007 KPY--------------YDVS--PKLEADVWFEACQVWECRAADLSI-SPVHTAGIGEKS 1049
Query: 232 FSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
LRFPR RVR DK VE+
Sbjct: 1050 PDKGIGLRFPRFLRVREDKNPEQATTSTQIVEM 1082
>gi|330805110|ref|XP_003290530.1| hypothetical protein DICPUDRAFT_81260 [Dictyostelium purpureum]
gi|325079360|gb|EGC32964.1| hypothetical protein DICPUDRAFT_81260 [Dictyostelium purpureum]
Length = 1144
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 107/196 (54%), Gaps = 15/196 (7%)
Query: 70 VEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGS 128
+ + FKE + EG+V+K+ S +EPG R W+K+K +YI+ +D D++ IGGYYGS
Sbjct: 421 LNRAFKEKL----EGLVIKNADSIYEPGARH--WIKVKKDYIKGMADSADLIAIGGYYGS 474
Query: 129 GRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPK 188
G GG V FL+A ++ + +R+ + + GL D+ +D + K+K +K
Sbjct: 475 GSFGGLVTVFLMACYDKVS-----KRYKTVVKASGGLDDKTIDKLQPKIKETMKKISKDH 529
Query: 189 RAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRY 248
P + + N PD +E P ++IL I S T ++ ++ YS+RFPRI R R
Sbjct: 530 TKVPDWIDI--NKPYTPDFIVEHPRDAMILEIESAELT-KTNYHTSGYSMRFPRIVRFRE 586
Query: 249 DKPWHDCLDVQSFVEL 264
DK + ++Q +EL
Sbjct: 587 DKDYKTATNLQELMEL 602
>gi|367017061|ref|XP_003683029.1| hypothetical protein TDEL_0G04510 [Torulaspora delbrueckii]
gi|359750692|emb|CCE93818.1| hypothetical protein TDEL_0G04510 [Torulaspora delbrueckii]
Length = 969
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 93/398 (23%), Positives = 169/398 (42%), Gaps = 58/398 (14%)
Query: 70 VEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIGGYYGS 128
+ K +++I EGIVLK +++E G R+ W+K+KPEY+ + G +LD++IIG
Sbjct: 446 IRKSLEKSISMGSEGIVLKSYKARYEIGARNDYWIKVKPEYLEQFGENLDLVIIG--RTP 503
Query: 129 GRRGGEVAQFLVALAERPAPDTYPRR-------------------------FISFCRVGT 163
G++ + V E + +R FISFC +
Sbjct: 504 GKKDSLMCGLAVYEGEEDLNEIEAKRESAIVNLDSEGDELDDTDGKKIIKYFISFCVIAN 563
Query: 164 GLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITS- 222
G+S +E + K + + K + +R P + + + P+ WI+ P+ SI+L + +
Sbjct: 564 GISQQEFKEIDRKTRGAWVKSD--QRLPSA--DLLRFGSKIPEEWID-PKNSIMLEVKAR 618
Query: 223 --DIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGG 280
D + F+A +L R+R DK W C SF EL + G G
Sbjct: 619 SLDNTESSKKKFAAGCTLHGGYCRRIRDDKDWTGCY---SFSELWQERLHKSSTG--VGS 673
Query: 281 LQDDKPKQFRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFY----FVNVPPAY 336
+ S+K + K I P D+ T+IF + FY +++V
Sbjct: 674 FNK------QYSKKMKSKKRKIDPFSGQAAKKHDVFDSTNIFKGLQFYVLSDYIDVSRNV 727
Query: 337 SL--DSLHKMVVENGGTFSMNL----NNSVTHCVAADNKGLKYEAAKRRG-DVIHYSWVL 389
+ ++++N G NL ++ + + + A RG D++ W+L
Sbjct: 728 RITKSEFDDLILQNSGKLVRNLISKHHSESQFRIISGKYTAECRALIERGYDILSPQWIL 787
Query: 390 DCCSQKKLLQLQPKYYLHLSDSSKKKLQEEVDEFSDLY 427
DC + +++L+P++ ++S + VDE+ D +
Sbjct: 788 DCIRNRMVVKLEPRHCFNVSSELMTIVNGRVDEYGDSF 825
>gi|163782827|ref|ZP_02177823.1| DNA ligase [Hydrogenivirga sp. 128-5-R1-1]
gi|159881948|gb|EDP75456.1| DNA ligase [Hydrogenivirga sp. 128-5-R1-1]
Length = 583
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 105/215 (48%), Gaps = 32/215 (14%)
Query: 63 VAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRAGSD-LDV 119
+ NV+++E FF + IE+ EG+V K L S +E G R W+K K +Y +D LD+
Sbjct: 378 IVDNVEDLEAFFHQAIEDGCEGLVCKSLAENSIYEAGKRGFLWIKYKRDYKSHLADTLDL 437
Query: 120 LIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 179
+++G +YG G+R G L+A + P+T +F + C+VGTG ++++ + LK
Sbjct: 438 VVVGAFYGKGQRAGHFGSLLMACYD---PET--DQFKTVCKVGTGFTEDDFKKLEEILKD 492
Query: 180 YFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPY--- 236
+ + +P+ NS D+W E ++L IT T S V + +
Sbjct: 493 HRIDHRHPR----------VNSIISADIWFEP---FLVLEITGAELTY-SPVHTCAWDKV 538
Query: 237 ------SLRFPRI-DRVRYDKPWHDCLDVQSFVEL 264
LRFPR R R+DK D + +E+
Sbjct: 539 KPGRGLGLRFPRFTGRYRFDKRPEDATTEREILEM 573
>gi|451998999|gb|EMD91462.1| hypothetical protein COCHEDRAFT_1101602 [Cochliobolus
heterostrophus C5]
Length = 888
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 93/196 (47%), Gaps = 21/196 (10%)
Query: 65 HNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVL 120
+ ++E++ +++++ EG+++K L S +EP RS WLK+K +Y+ G LD++
Sbjct: 669 NELEEIQTLLEDSVKEGCEGLMVKMLDGPESYYEPSKRSQNWLKVKKDYLAGVGDSLDLV 728
Query: 121 IIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPY 180
++G YYG G+R FL+A P T ++ + C +GTG S+ L+ + L
Sbjct: 729 VLGAYYGKGKRTSWYGAFLLACYN---PST--EKYETVCNIGTGFSEAILETLHKTLS-- 781
Query: 181 FRKYEYPKRAPPSFYQVTNNSKERPDVWIES------PEKSIILSITSDIRTIRSEVFSA 234
E P FY + +K++PDVW E + LS
Sbjct: 782 ----EIVIDRPKPFYTHSTGNKDQPDVWFEPRYVWEVKTADLTLSPRYKAAAAEVGGGGK 837
Query: 235 PYSLRFPRIDRVRYDK 250
SLRFPR + R DK
Sbjct: 838 GVSLRFPRFIKEREDK 853
>gi|291415245|ref|XP_002723865.1| PREDICTED: DNA ligase (ATP) 1, partial [Oryctolagus cuniculus]
Length = 757
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 99/198 (50%), Gaps = 21/198 (10%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEYIRA-GSDL 117
SL +++++ +F ++++++ EG+++K D+ + +E RS WLKLK +Y+ G L
Sbjct: 536 SLDTKDLEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDGVGDTL 595
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D+++IG Y G G+R G FL+A + DT + C++GTG SDEEL+ L
Sbjct: 596 DLVVIGAYLGRGKRAGRYGGFLLACYDE---DT--EGLQAICKLGTGFSDEELEEQHQSL 650
Query: 178 KPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRSEV-F 232
+ AP + Q PD W++ K LS++ R V
Sbjct: 651 QALVLP------APRPYVQAGGAVA--PDHWLDPTTVWEVKCADLSLSPIYPAARGLVDK 702
Query: 233 SAPYSLRFPRIDRVRYDK 250
SLRFPR RVR DK
Sbjct: 703 EKGISLRFPRFVRVRKDK 720
>gi|385804030|ref|YP_005840430.1| DNA ligase (ATP) [Haloquadratum walsbyi C23]
gi|339729522|emb|CCC40785.1| DNA ligase (ATP) [Haloquadratum walsbyi C23]
Length = 618
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 94/193 (48%), Gaps = 33/193 (17%)
Query: 78 IENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVLIIGGYYGSGRRGGEVAQ 137
+ N EG++LKD S + PG R WLK KP+ LD+++ G +G GRR
Sbjct: 455 LSNGHEGVMLKDPDSTYNPGSRGQHWLKHKPDV----ETLDLVVTGAEWGEGRRANVFGT 510
Query: 138 FLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQV 197
F+V + R D ++F S +V TGL+D++L + +L+P+ R
Sbjct: 511 FVV--SARTTADE--QQFNSLGKVATGLTDDQLTTLTEQLRPHVR--------------- 551
Query: 198 TNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLD 257
S++ V I E +I++ + + RS + + ++LRFPR+ +R+DK D
Sbjct: 552 ---SEDGQTVMI---EPAIVVEVGYE-EIQRSPTYDSGFALRFPRVVGIRHDKAIS---D 601
Query: 258 VQSFVELVHSSNG 270
V S + H + G
Sbjct: 602 VDSLSRIKHLTTG 614
>gi|451848363|gb|EMD61669.1| hypothetical protein COCSADRAFT_96111 [Cochliobolus sativus ND90Pr]
Length = 883
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 93/196 (47%), Gaps = 21/196 (10%)
Query: 65 HNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVL 120
+ ++E++ +++++ EG+++K L S +EP RS WLK+K +Y+ G LD++
Sbjct: 664 NELEEIQTLLEDSVKEGCEGLMVKMLDGPESYYEPSKRSQNWLKVKKDYLAGVGDSLDLV 723
Query: 121 IIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPY 180
++G YYG G+R FL+A P T ++ + C +GTG S+ L+ + L
Sbjct: 724 VLGAYYGKGKRTSWYGAFLLACYN---PST--EKYETVCNIGTGFSEAILETLHKTLS-- 776
Query: 181 FRKYEYPKRAPPSFYQVTNNSKERPDVWIES------PEKSIILSITSDIRTIRSEVFSA 234
E P FY + +K++PDVW E + LS
Sbjct: 777 ----EIVIDRPKPFYTHSTGNKDQPDVWFEPRYVWEVKTADLTLSPRYKAAAAEVGGGGK 832
Query: 235 PYSLRFPRIDRVRYDK 250
SLRFPR + R DK
Sbjct: 833 GVSLRFPRFIKEREDK 848
>gi|224487995|sp|A0RWD6.2|DNLI_CENSY RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
Length = 589
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 100/211 (47%), Gaps = 16/211 (7%)
Query: 70 VEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIGGYYGS 128
+E + +I EG++LK + + G R G WLKLK EY G LD++IIG ++G
Sbjct: 388 LEDSLENSINAGCEGLMLKLPDAPYRAGSRGGYWLKLKREYRNELGDSLDLVIIGAFFGK 447
Query: 129 GRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPK 188
GRR G L+A + + DT+P S C+VGTG +DE+LD + L P K
Sbjct: 448 GRRTGRYGTLLLATYD-DSRDTFP----SICKVGTGFTDEDLDQLYQLLSPRVTL----K 498
Query: 189 RAPPSFYQVTNNSKERPDVWIESPEKSIILSIT--SDIRTIRSEVFSAPYSLRFPRI-DR 245
R P + + P+V +E I LS + + ++R A +LRFP+ +
Sbjct: 499 RNPRIDSGMEADVWFDPEVVMEVVASEITLSPVHKTALDSVRK---GAGLALRFPKFTGK 555
Query: 246 VRYDKPWHDCLDVQSFVELVHSSNGTTQKGK 276
+R +K D Q + L S G+
Sbjct: 556 LRTEKTAEDASTDQEVIALYKSQKKVVPDGQ 586
>gi|118576214|ref|YP_875957.1| ATP-dependent DNA ligase [Cenarchaeum symbiosum A]
gi|118194735|gb|ABK77653.1| ATP-dependent DNA ligase [Cenarchaeum symbiosum A]
Length = 577
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 100/211 (47%), Gaps = 16/211 (7%)
Query: 70 VEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIGGYYGS 128
+E + +I EG++LK + + G R G WLKLK EY G LD++IIG ++G
Sbjct: 376 LEDSLENSINAGCEGLMLKLPDAPYRAGSRGGYWLKLKREYRNELGDSLDLVIIGAFFGK 435
Query: 129 GRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPK 188
GRR G L+A + + DT+P S C+VGTG +DE+LD + L P K
Sbjct: 436 GRRTGRYGTLLLATYD-DSRDTFP----SICKVGTGFTDEDLDQLYQLLSPRVTL----K 486
Query: 189 RAPPSFYQVTNNSKERPDVWIESPEKSIILSIT--SDIRTIRSEVFSAPYSLRFPRI-DR 245
R P + + P+V +E I LS + + ++R A +LRFP+ +
Sbjct: 487 RNPRIDSGMEADVWFDPEVVMEVVASEITLSPVHKTALDSVRK---GAGLALRFPKFTGK 543
Query: 246 VRYDKPWHDCLDVQSFVELVHSSNGTTQKGK 276
+R +K D Q + L S G+
Sbjct: 544 LRTEKTAEDASTDQEVIALYKSQKKVVPDGQ 574
>gi|426244015|ref|XP_004015832.1| PREDICTED: LOW QUALITY PROTEIN: DNA ligase 1 [Ovis aries]
Length = 893
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 99/211 (46%), Gaps = 45/211 (21%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEYIRA-GSDL 117
SL + +++ +F ++++++ EG+++K D+ + +E RS WLKLK +Y+ G L
Sbjct: 670 SLDTKDTEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLEGVGDTL 729
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D+++IG Y G G+R G FL+A + D F + C++GTG SDEEL+ +L
Sbjct: 730 DLVVIGAYLGKGKRAGRYGGFLLA-----SYDEESEEFQAICKLGTGFSDEELEEHHQRL 784
Query: 178 K----PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFS 233
+ P R Y V + PD W++ S ++ T+ E
Sbjct: 785 QALVLPTPRSY------------VRADGAVAPDHWLDP-------SDVWEVETLGGECCL 825
Query: 234 AP--------------YSLRFPRIDRVRYDK 250
SLRFPR RVR DK
Sbjct: 826 FLPLPPHLPQVDSEKGISLRFPRFIRVREDK 856
>gi|395849244|ref|XP_003797241.1| PREDICTED: DNA ligase 3 [Otolemur garnettii]
Length = 1008
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 103/206 (50%), Gaps = 20/206 (9%)
Query: 67 VDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIG 123
VD + + +E +E G+VLKD+ S +EPG R WLK+K +Y+ G+ D++++G
Sbjct: 643 VDMINRVIREGLE----GLVLKDVKSTYEPGKRH--WLKVKKDYLNEGAMADTADLVVLG 696
Query: 124 GYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRK 183
+YG G +GG ++ FL+ D +++ + + G D L + +L +
Sbjct: 697 AFYGQGNKGGMMSIFLMGCY-----DPSSQKWCTVTKCAGGHDDATLARLQKELD-MVKI 750
Query: 184 YEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA-PYSLRFPR 242
+ P + P S+ ++ N PD + P+K+ + IT +SE +A S+RFPR
Sbjct: 751 SKDPSKIP-SWLKI--NKIYYPDFIVPDPKKAAVWEITG-AEFSKSEAHTADGISIRFPR 806
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSS 268
R+R DK W ++ EL S
Sbjct: 807 CTRIRDDKDWKSATNLPQLKELYQLS 832
>gi|359488141|ref|XP_002266168.2| PREDICTED: uncharacterized protein LOC100266816 [Vitis vinifera]
Length = 1449
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 105/213 (49%), Gaps = 30/213 (14%)
Query: 66 NVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLII 122
+ ++ F +E + EGI++K D+ + + P R+ WLK+K +Y+ +D LD++ I
Sbjct: 1243 TLTKINLFLEEAFRSSCEGIMIKSLDIDAGYSPSKRTDTWLKVKRDYVEGLNDSLDLVPI 1302
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
G ++G+GR+ G + FL+A PDT F S CRV +G SD ++K +F
Sbjct: 1303 GAWHGNGRKAGWYSPFLMACYN---PDT--EEFQSVCRVMSGFSDN----FYKEMKEFFN 1353
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP------- 235
+ + + PP +YQ + E PD+W +PE +I I T+ S V A
Sbjct: 1354 EDKILSKKPP-YYQ----TAELPDMWF-TPE--LIWEIRGADFTV-SPVHQAAIGLVHPS 1404
Query: 236 --YSLRFPRIDRVRYDKPWHDCLDVQSFVELVH 266
S+RFPR R D+ +C ++ H
Sbjct: 1405 RGISVRFPRFIRPIMDRRPEECSTAADIADMFH 1437
>gi|110668565|ref|YP_658376.1| DNA ligase (ATP) [Haloquadratum walsbyi DSM 16790]
gi|121689659|sp|Q18GX5.1|DNLI2_HALWD RecName: Full=DNA ligase 2; AltName: Full=Polydeoxyribonucleotide
synthase [ATP] 2
gi|109626312|emb|CAJ52770.1| DNA ligase (ATP) [Haloquadratum walsbyi DSM 16790]
Length = 618
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 94/193 (48%), Gaps = 33/193 (17%)
Query: 78 IENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVLIIGGYYGSGRRGGEVAQ 137
+ N EG++LKD S + PG R WLK KP+ LD+++ G +G GRR
Sbjct: 455 LSNGHEGVMLKDPDSTYNPGSRGQHWLKHKPDV----ETLDLVVTGAEWGEGRRANVFGT 510
Query: 138 FLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQV 197
F+V + R D ++F S +V TGL+D++L + +L+P+ R
Sbjct: 511 FVV--SARTTADE--QQFNSLGKVATGLTDDQLTTLTEQLRPHVR--------------- 551
Query: 198 TNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLD 257
S++ V I E +I++ + + RS + + ++LRFPR+ +R+DK D
Sbjct: 552 ---SEDGQTVMI---EPAIVVEVGYE-EIQRSPTYDSGFALRFPRVVGIRHDKAIS---D 601
Query: 258 VQSFVELVHSSNG 270
V S + H + G
Sbjct: 602 VDSLSRIKHLTTG 614
>gi|322785626|gb|EFZ12281.1| hypothetical protein SINV_12354 [Solenopsis invicta]
Length = 585
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 89/173 (51%), Gaps = 14/173 (8%)
Query: 83 EGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGGEVAQFL 139
EG+VLKD+ SK+EPG R WLK+K +Y+ G+ D++++G +YG+G +GG ++ FL
Sbjct: 250 EGLVLKDIDSKYEPGKRH--WLKVKKDYLCGGAMADSADLVVLGAWYGTGNKGGMLSVFL 307
Query: 140 VALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTN 199
+ D ++++ +V TG D L AV+ + + P++ P +
Sbjct: 308 MGCY-----DQKRDKWLTVTKVHTGHDDATL-AVLQDQLDMVKIGKDPEKLPSWLHA--- 358
Query: 200 NSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPW 252
PD P+K + IT T + + S+RFPR+ R+R DK W
Sbjct: 359 KKPMVPDFVARDPKKQPVWEITGAEFTNQGVHTAEGISIRFPRVTRIRDDKDW 411
>gi|95007356|emb|CAJ20576.1| DNA ligase, putative [Toxoplasma gondii RH]
Length = 785
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 100/216 (46%), Gaps = 39/216 (18%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLII 122
+ E F E IE EG+++K L + +EP RS WLK+K +Y+ +D +D++ I
Sbjct: 555 GAQDFEDFLTEAIEGNCEGLMVKTLRENATYEPSKRSLNWLKVKKDYVDGLTDSVDLVPI 614
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEEL--------DAVV 174
G YG G+R G +L+A+ PA +T F + C+ TG S+E L D ++
Sbjct: 615 GACYGKGKRSGTFGTYLLAVYN-PADET----FQTVCKAATGFSEEALQQHHKALSDRII 669
Query: 175 TKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRT--IR 228
+ KPY Y V+ K DVW E+ + ++ LSI S + T I
Sbjct: 670 SHKKPY--------------YDVS--PKLEADVWFEACQVWECRAADLSI-SPVHTAGIG 712
Query: 229 SEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
+ LRFPR RVR DK VE+
Sbjct: 713 EKSPDKGIGLRFPRFLRVREDKNPEQATTSTQIVEM 748
>gi|149053630|gb|EDM05447.1| rCG33581, isoform CRA_b [Rattus norvegicus]
Length = 1015
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 104/206 (50%), Gaps = 20/206 (9%)
Query: 67 VDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIG 123
D + + +E +E G+VLKD+ +EPG R WLK+K +Y+ G+ D++++G
Sbjct: 645 ADMINRVIREGLE----GLVLKDVKGTYEPGKRH--WLKVKKDYLNEGAMADTADLVVLG 698
Query: 124 GYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRK 183
+YG G +GG ++ FL+ + PD+ +++ + + G D L A + K +
Sbjct: 699 AFYGQGSKGGMMSIFLMGCYD---PDS--QKWCTVTKCAGGHDDATL-ARLQKELDMVKI 752
Query: 184 YEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA-PYSLRFPR 242
+ P + P S+ ++ N PD + P+K+ + IT RSE +A S+RFPR
Sbjct: 753 SKDPSKIP-SWLKI--NKIYYPDFIVPDPKKAAVWEITG-AEFSRSEAHTADGISIRFPR 808
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSS 268
R+R DK W ++ EL S
Sbjct: 809 CTRIRDDKDWKSATNLPQLKELYQLS 834
>gi|302805053|ref|XP_002984278.1| hypothetical protein SELMODRAFT_119719 [Selaginella moellendorffii]
gi|300148127|gb|EFJ14788.1| hypothetical protein SELMODRAFT_119719 [Selaginella moellendorffii]
Length = 638
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 98/200 (49%), Gaps = 37/200 (18%)
Query: 67 VDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIG 123
++E++ F + I + EG+++K L + +EP RS WLKLK +Y+ G LD++ IG
Sbjct: 428 LEEIQSFLNDAINHSCEGLIVKTLEKDATYEPAKRSNNWLKLKKDYMDTIGDSLDLVPIG 487
Query: 124 GYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDA--------VVT 175
++G G+R G FL+A + PD + S C++GTG ++ L+ V+
Sbjct: 488 AFHGRGKRVGVYGAFLLACYD---PDK--EEYQSICKIGTGFTEAVLEERSNTLRKHVID 542
Query: 176 KLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRSEV 231
+PY+R E DVW + E K+ LSI+ + E+
Sbjct: 543 TPRPYYRYGE----------------TLAVDVWFDPVEVWEVKAADLSISPVHKAAYGEL 586
Query: 232 -FSAPYSLRFPRIDRVRYDK 250
S SLRFPR+ R+R DK
Sbjct: 587 ETSKGISLRFPRLLRMREDK 606
>gi|164660400|ref|XP_001731323.1| hypothetical protein MGL_1506 [Malassezia globosa CBS 7966]
gi|159105223|gb|EDP44109.1| hypothetical protein MGL_1506 [Malassezia globosa CBS 7966]
Length = 701
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 87/167 (52%), Gaps = 25/167 (14%)
Query: 92 SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDT 150
+ +EP RS WLKLK +Y+ G LD+ +IG YYG G+R FL+A + + +T
Sbjct: 517 ATYEPSRRSINWLKLKKDYLSGTGDSLDLTVIGAYYGRGKRTNVYGAFLLACYDEDS-ET 575
Query: 151 YPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIE 210
Y S C++GTG S+ +LDA + LK + E P++ +Y + + +PDV+ E
Sbjct: 576 YQ----SICKIGTGFSEADLDAHYSTLK----ELEIPRKK--GYYDL---GEAKPDVFFE 622
Query: 211 SPEKSII-------LSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDK 250
I+ LS++ R + + SLRFPR R+R DK
Sbjct: 623 P---RIVWEVLAADLSLSPVYTAARGAIDARGISLRFPRFIRIRDDK 666
>gi|351702584|gb|EHB05503.1| DNA ligase 1 [Heterocephalus glaber]
Length = 874
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 104/209 (49%), Gaps = 25/209 (11%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEYIRA-GSDL 117
SL +++++ +F ++++++ EG+++K D+ + +E RS WLKLK +Y+ G L
Sbjct: 636 SLDTKDMEQIAEFLEQSVKDSCEGLMVKTLDVNATYEIAKRSHNWLKLKKDYLDGVGDTL 695
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVT-- 175
D+++IG Y G G+R G FL+A+ D + C++GTG SDE+L+
Sbjct: 696 DLVVIGAYLGRGKRAGRYGGFLLAVY-----DEESEELQAICKLGTGFSDEQLEEHYQSL 750
Query: 176 ---------KLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITS 222
+L+ +++ + P Y V + PD W++ K LS++
Sbjct: 751 QLGTGFSDEQLEEHYQSLQALVLPTPRPY-VRADGAVAPDHWLDPSAVWEVKCADLSLSP 809
Query: 223 DIRTIRSEVFSAP-YSLRFPRIDRVRYDK 250
R V S SLRFPR RVR DK
Sbjct: 810 VYPAARGLVDSEKGISLRFPRFIRVREDK 838
>gi|341940451|sp|P97386.2|DNLI3_MOUSE RecName: Full=DNA ligase 3; AltName: Full=DNA ligase III; AltName:
Full=Polydeoxyribonucleotide synthase [ATP] 3
Length = 1015
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 101/206 (49%), Gaps = 20/206 (9%)
Query: 67 VDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIG 123
D + + +E +E G+VLKD+ +EPG R WLK+K +Y+ G+ D++++G
Sbjct: 648 ADMINRVIREGLE----GLVLKDVKGTYEPGKR--HWLKVKKDYLNEGAMADTADLVVLG 701
Query: 124 GYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRK 183
+YG G +GG ++ FL+ + PD+ +++ + + G D L + +L K
Sbjct: 702 AFYGQGSKGGMMSIFLMGCYD---PDS--QKWCTVTKCAGGHDDATLARLQKEL--VMVK 754
Query: 184 YEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA-PYSLRFPR 242
PS+ ++ N PD + P+K+ + IT RSE +A S+RFPR
Sbjct: 755 ISKDPSKIPSWLKI--NKIYYPDFIVPDPKKAAVWEITG-AEFSRSEAHTADGISIRFPR 811
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSS 268
R+R DK W ++ EL S
Sbjct: 812 CTRIRDDKDWKSATNLPQLKELYQLS 837
>gi|334183682|ref|NP_176845.2| DNA ligase 6 [Arabidopsis thaliana]
gi|332196428|gb|AEE34549.1| DNA ligase 6 [Arabidopsis thaliana]
Length = 1396
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 103/225 (45%), Gaps = 41/225 (18%)
Query: 61 SLVAHN-VDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEYIRA-GSD 116
SL H+ + + F +E ++ EGI++K D+ + + P RS WLK+K +Y+ G
Sbjct: 1184 SLNNHDTLSRINAFLEEAFQSSCEGIMVKSLDVNAGYCPTKRSDSWLKVKRDYVDGLGDT 1243
Query: 117 LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTK 176
LD++ IG +YG+GR+ G + FL+A P+T F S CRV +G S DA +
Sbjct: 1244 LDLVPIGAWYGNGRKAGWYSPFLMACFN---PET--EEFQSVCRVMSGFS----DAFYIE 1294
Query: 177 LKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIE--------------SPEKSIILSITS 222
+K ++ + + + PP + + E PD+W SP S L +
Sbjct: 1295 MKEFYSEDKILAKKPPYY-----RTGETPDMWFSAEVVWEIRGADFTVSPVHSASLGLVH 1349
Query: 223 DIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 267
R I S+RFPR D+ +C E+ H+
Sbjct: 1350 PSRGI---------SVRFPRFISKVTDRNPEECSTATDIAEMFHA 1385
>gi|71061470|ref|NP_034846.2| DNA ligase 3 [Mus musculus]
gi|29165722|gb|AAH49240.1| Ligase III, DNA, ATP-dependent [Mus musculus]
gi|53733359|gb|AAH83500.1| Ligase III, DNA, ATP-dependent [Mus musculus]
gi|74138035|dbj|BAE25421.1| unnamed protein product [Mus musculus]
gi|148683722|gb|EDL15669.1| ligase III, DNA, ATP-dependent, isoform CRA_a [Mus musculus]
Length = 1012
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 101/206 (49%), Gaps = 20/206 (9%)
Query: 67 VDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIG 123
D + + +E +E G+VLKD+ +EPG R WLK+K +Y+ G+ D++++G
Sbjct: 645 ADMINRVIREGLE----GLVLKDVKGTYEPGKR--HWLKVKKDYLNEGAMADTADLVVLG 698
Query: 124 GYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRK 183
+YG G +GG ++ FL+ + PD+ +++ + + G D L + +L K
Sbjct: 699 AFYGQGSKGGMMSIFLMGCYD---PDS--QKWCTVTKCAGGHDDATLARLQKEL--VMVK 751
Query: 184 YEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA-PYSLRFPR 242
PS+ ++ N PD + P+K+ + IT RSE +A S+RFPR
Sbjct: 752 ISKDPSKIPSWLKI--NKIYYPDFIVPDPKKAAVWEITG-AEFSRSEAHTADGISIRFPR 808
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSS 268
R+R DK W ++ EL S
Sbjct: 809 CTRIRDDKDWKSATNLPQLKELYQLS 834
>gi|406925545|gb|EKD61995.1| hypothetical protein ACD_52C00325G0006 [uncultured bacterium]
Length = 571
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 100/192 (52%), Gaps = 23/192 (11%)
Query: 63 VAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDV 119
+ + E+++ +E +++ EG+++K SK+ PG +W+K+K G LD
Sbjct: 380 ITESAQEIKRRHREMVDDGLEGVIVKRADSKYVPGRTGWRWVKMKGAVGSEGKLADTLDC 439
Query: 120 LIIGGYYGSGRRGG-EVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLK 178
+++G G G+R V QFLV + + +F++ ++GTGLSDEE + +L+
Sbjct: 440 VVLGYSAGRGKRAAFGVGQFLVGVRK-------GEKFVTVTKIGTGLSDEEFRELNRRLQ 492
Query: 179 PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSL 238
+ R P ++V N + PD W+E +++ I +D T+ S +A Y+L
Sbjct: 493 ------KIKLRDKPKEFEVHKNLE--PDNWVEP---VVVVEIAADNITV-SPTHTARYAL 540
Query: 239 RFPRIDRVRYDK 250
RFPR+ R R DK
Sbjct: 541 RFPRLVRFRDDK 552
>gi|74151892|dbj|BAE29732.1| unnamed protein product [Mus musculus]
Length = 1011
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 101/206 (49%), Gaps = 20/206 (9%)
Query: 67 VDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIG 123
D + + +E +E G+VLKD+ +EPG R WLK+K +Y+ G+ D++++G
Sbjct: 644 ADMINRVIREGLE----GLVLKDVKGTYEPGKRH--WLKVKKDYLNEGAMADTADLVVLG 697
Query: 124 GYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRK 183
+YG G +GG ++ FL+ + PD+ +++ + + G D L + +L K
Sbjct: 698 AFYGQGSKGGMMSIFLMGCYD---PDS--QKWCTVTKCAGGHDDATLARLQKEL--VMVK 750
Query: 184 YEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA-PYSLRFPR 242
PS+ ++ N PD + P+K+ + IT RSE +A S+RFPR
Sbjct: 751 ISKDPSKIPSWLKI--NKIYYPDFIVPDPKKAAVWEITG-AEFSRSEAHTADGISIRFPR 807
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSS 268
R+R DK W ++ EL S
Sbjct: 808 CTRIRDDKDWKSATNLPQLKELYQLS 833
>gi|74217593|dbj|BAE33548.1| unnamed protein product [Mus musculus]
Length = 1011
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 101/206 (49%), Gaps = 20/206 (9%)
Query: 67 VDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIG 123
D + + +E +E G+VLKD+ +EPG R WLK+K +Y+ G+ D++++G
Sbjct: 644 ADMINRVIREGLE----GLVLKDVKGTYEPGKR--HWLKVKKDYLNEGAMADTADLVVLG 697
Query: 124 GYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRK 183
+YG G +GG ++ FL+ + PD+ +++ + + G D L + +L K
Sbjct: 698 AFYGQGSKGGMMSIFLMGCYD---PDS--QKWCTVTKCAGGHDDATLARLQKEL--VMVK 750
Query: 184 YEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA-PYSLRFPR 242
PS+ ++ N PD + P+K+ + IT RSE +A S+RFPR
Sbjct: 751 ISKDPSKIPSWLKI--NKIYYPDFIVPDPKKAAVWEITG-AEFSRSEAHTADGISIRFPR 807
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSS 268
R+R DK W ++ EL S
Sbjct: 808 CTRIRDDKDWKSATNLPQLKELYQLS 833
>gi|241614142|ref|XP_002406581.1| DNA ligase, putative [Ixodes scapularis]
gi|215500833|gb|EEC10327.1| DNA ligase, putative [Ixodes scapularis]
Length = 851
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 146/340 (42%), Gaps = 38/340 (11%)
Query: 63 VAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDV 119
V D++++ + + EG+VLKD +EPG R W+K+K +Y+ GS D+
Sbjct: 523 VIKTRDQLQELIADVLNQGLEGLVLKDPDGVYEPGKRH--WMKVKKDYLEGGSMADSADL 580
Query: 120 LIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 179
++G Y+G+G +GG ++ FL+ PA R+ + +V G D L+ + T+L+
Sbjct: 581 AVLGAYFGTGNKGGIMSIFLMG-CWNPATG----RWCTVTKVHGGHDDTTLERLQTELE- 634
Query: 180 YFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA-PYSL 238
K P + V PD + P + + I S R+E+ +A S+
Sbjct: 635 -MTKISKQADRVPRWLDV--QKPLVPDFVAKDPNNTQVWEI-SGAEFTRAEIHTADGISI 690
Query: 239 RFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKK 298
RFPR+ R+RYDK + + +L S KE K S +G+
Sbjct: 691 RFPRVTRIRYDKTPKEATSLPELRKLFKVS-------KENPFEAGKKTDAANRSPEGKDS 743
Query: 299 NVSIVPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDS--------LHKMVVENGG 350
N P Q + S K ++ + S + P ++ + L + V G
Sbjct: 744 NAKKSPHRSPQVEDSGTKKQSPVGSSPKRKLCDFPDVFTGVTMFLPEDRLLRRYFVAYDG 803
Query: 351 TFSMNLNNSVTHCVAADNKGLKYEAAKRRGDVIHYSWVLD 390
+ + +SVTH + D+ LK AKR + +W+ D
Sbjct: 804 QLAKSDKDSVTHVLKGDHVKLK---AKR----VSLNWLWD 836
>gi|293333963|ref|NP_001169987.1| uncharacterized protein LOC100383890 [Zea mays]
gi|224032747|gb|ACN35449.1| unknown [Zea mays]
Length = 452
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 84/156 (53%), Gaps = 16/156 (10%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRA-GSDL 117
++ +++++E++KF + + EG+++K L + +EP RS WLKLK +Y+ + G L
Sbjct: 236 AITSNDLEEIQKFLDTAVNSSCEGLIIKTLDKDATYEPAKRSNNWLKLKKDYMDSIGDSL 295
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D++ I +YG G+R G FL+A D + + C +GTG S+++L+ L
Sbjct: 296 DLVPIAAFYGRGKRTGVFGSFLLACY-----DEQNEEYQTICNIGTGFSEQQLEERSASL 350
Query: 178 KPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE 213
+ + E PK ++Y+ + PDVW E E
Sbjct: 351 RS--KVIEKPK----AYYRFGDTM--NPDVWFEPSE 378
>gi|354466767|ref|XP_003495844.1| PREDICTED: DNA ligase 3 isoform 1 [Cricetulus griseus]
Length = 942
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 101/208 (48%), Gaps = 24/208 (11%)
Query: 67 VDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIG 123
D + + +E +E G+VLKD+ +EPG R WLK+K +Y+ G+ D++++G
Sbjct: 644 ADMINRVIREGLE----GLVLKDVKGTYEPGKRH--WLKVKKDYLNEGAMADTADLVVLG 697
Query: 124 GYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRK 183
+YG G +GG ++ FL+ + PD+ ++ C G DA + +L+
Sbjct: 698 AFYGQGSKGGMMSIFLMGCYD---PDSQKWCTVTKCAGGHD------DATLARLQKELDM 748
Query: 184 YEYPKRAP--PSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA-PYSLRF 240
+ K PS+ ++ N PD + P+K+ + IT +SE +A S+RF
Sbjct: 749 VKISKDPSKIPSWLKI--NKIYYPDFIVSDPKKAAVWEITG-AEFSKSEAHTADGISIRF 805
Query: 241 PRIDRVRYDKPWHDCLDVQSFVELVHSS 268
PR R+R DK W ++ EL S
Sbjct: 806 PRCTRIRDDKDWKSATNLPQLKELYQLS 833
>gi|296087222|emb|CBI33596.3| unnamed protein product [Vitis vinifera]
Length = 1390
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 105/213 (49%), Gaps = 30/213 (14%)
Query: 66 NVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLII 122
+ ++ F +E + EGI++K D+ + + P R+ WLK+K +Y+ +D LD++ I
Sbjct: 1184 TLTKINLFLEEAFRSSCEGIMIKSLDIDAGYSPSKRTDTWLKVKRDYVEGLNDSLDLVPI 1243
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
G ++G+GR+ G + FL+A PDT F S CRV +G SD ++K +F
Sbjct: 1244 GAWHGNGRKAGWYSPFLMACYN---PDT--EEFQSVCRVMSGFSDN----FYKEMKEFFN 1294
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP------- 235
+ + + PP +YQ + E PD+W +PE +I I T+ S V A
Sbjct: 1295 EDKILSKKPP-YYQ----TAELPDMWF-TPE--LIWEIRGADFTV-SPVHQAAIGLVHPS 1345
Query: 236 --YSLRFPRIDRVRYDKPWHDCLDVQSFVELVH 266
S+RFPR R D+ +C ++ H
Sbjct: 1346 RGISVRFPRFIRPIMDRRPEECSTAADIADMFH 1378
>gi|289548048|ref|YP_003473036.1| DNA ligase I, ATP-dependent Dnl1 [Thermocrinis albus DSM 14484]
gi|289181665|gb|ADC88909.1| DNA ligase I, ATP-dependent Dnl1 [Thermocrinis albus DSM 14484]
Length = 577
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 104/222 (46%), Gaps = 25/222 (11%)
Query: 63 VAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLI 121
+ E+E+FF++ + EGI+ K L + + G R+ W+KLK Y A +D +DV+I
Sbjct: 372 IVETAKEIEEFFQDAVSRGLEGIMAKRLDAPYTAGSRNFNWIKLKRSYRGALTDTVDVVI 431
Query: 122 IGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYF 181
+G +YG G R L+ P+ DT F + +VG+G +++E +LK
Sbjct: 432 VGYFYGKGARAKLGIGALLTAVYDPSTDT----FKTISKVGSGFTEDEW----IRLKNLL 483
Query: 182 RKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSD------IRTIRSEVFSAP 235
+ + P R +S DVW+E ++++T+D + T +
Sbjct: 484 DEIKLPHR------HARVDSILEADVWVEP---KYVVTVTADEITRSPLHTAGRTITEPG 534
Query: 236 YSLRFPR-IDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGK 276
Y+LRFPR + +R DK D V+ + L + +G+
Sbjct: 535 YALRFPRAVGFIRIDKKPEDATTVEEILRLYQLQRKVSTEGE 576
>gi|74183394|dbj|BAE36577.1| unnamed protein product [Mus musculus]
Length = 699
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 101/206 (49%), Gaps = 37/206 (17%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEYIRA-GSDL 117
SL + +++ +F ++++++ EG+++K D+ + +E RS WLKLK +Y+ G L
Sbjct: 479 SLDTKDTEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDGVGDTL 538
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELD----AV 173
D+++IG Y G G+R G FL+A A D + C++G G SDEEL+ ++
Sbjct: 539 DLVVIGAYLGRGKRAGRYGGFLLA-----AYDEESEELQAICKLGNGFSDEELEEHHQSL 593
Query: 174 VTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFS 233
+ P R Y V + PD W++ SI+ + ++ S ++
Sbjct: 594 QALVLPTPRPY------------VRIDGAVAPDHWLDP---SIVWEVKCADLSL-SPIYP 637
Query: 234 AP---------YSLRFPRIDRVRYDK 250
A SLRFPR RVR DK
Sbjct: 638 AARGLVDKEKGISLRFPRFIRVRKDK 663
>gi|452821973|gb|EME28997.1| DNA ligase 1 [Galdieria sulphuraria]
Length = 671
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 86/161 (53%), Gaps = 18/161 (11%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLKDL---GSKWEPGDRSGKWLKLKPEYIRAGSD- 116
+L++ V+EVE + I N EG++ K L S + P RS W K+K +Y+ SD
Sbjct: 514 TLISSQVNEVEAWLNRAISNGCEGLMCKALDGPNSVYYPSKRSEGWSKIKKDYVEGISDT 573
Query: 117 LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTK 176
+D++ I ++G+GR+ G ++ FL+A Y F S C+V +G SDEE ++
Sbjct: 574 MDLVPIAAWWGNGRKAGWLSPFLLACY-------YDGEFQSVCKVMSGFSDEEYKSLT-- 624
Query: 177 LKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSII 217
+ Y R P + P +YQV + RP +W+++ + ++
Sbjct: 625 -EFYLRDKTLPIKPP--YYQV--DESLRPAIWLQACQVYVL 660
>gi|414870977|tpg|DAA49534.1| TPA: putative DNA ligase family protein [Zea mays]
Length = 909
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 90/168 (53%), Gaps = 20/168 (11%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRA-GSDL 117
++ +++++E++KF + + EG+++K L + +EP RS WLKLK +Y+ + G L
Sbjct: 693 AITSNDLEEIQKFLDTAVNSSCEGLIIKTLDKDATYEPAKRSNNWLKLKKDYMDSIGDSL 752
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D++ I +YG G+R G FL+A D + + C +GTG S+++L+ L
Sbjct: 753 DLVPIAAFYGRGKRTGVFGSFLLACY-----DEQNEEYQTICNIGTGFSEQQLEERSASL 807
Query: 178 KPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSIT 221
+ + E PK ++Y+ + PDVW E E K+ LSI+
Sbjct: 808 RS--KVIEKPK----AYYRFGDTM--NPDVWFEPSEVWEVKAADLSIS 847
>gi|288818769|ref|YP_003433117.1| DNA ligase [Hydrogenobacter thermophilus TK-6]
gi|384129518|ref|YP_005512131.1| ATP-dependent DNA ligase I [Hydrogenobacter thermophilus TK-6]
gi|288788169|dbj|BAI69916.1| DNA ligase [Hydrogenobacter thermophilus TK-6]
gi|308752355|gb|ADO45838.1| DNA ligase I, ATP-dependent Dnl1 [Hydrogenobacter thermophilus
TK-6]
Length = 572
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 105/212 (49%), Gaps = 29/212 (13%)
Query: 58 PCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD- 116
P + +V E+E+FF++ + EGI+ K L + + G R+ W+KLK Y + +D
Sbjct: 365 PSEMFITDSVKEIERFFEDAVARGLEGIMAKRLDAPYTAGSRNFNWIKLKRSYKGSLADT 424
Query: 117 LDVLIIGGYYGSGRRGG-EVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVT 175
+DV+I+G +YG G R + L AL + PA DT F + +VG+G ++EE
Sbjct: 425 IDVVIVGYFYGKGSRAKLGIGALLTALYD-PATDT----FKTVSKVGSGFTEEEW----I 475
Query: 176 KLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA- 234
KLK + + P R +S DVW+E ++++ +D RS + +A
Sbjct: 476 KLKEMLDEIKLPHR------HARVDSLLEADVWVEP---KYVITVNAD-EITRSPLHTAG 525
Query: 235 ------PYSLRFPR-IDRVRYDKPWHDCLDVQ 259
++LRFPR + +R DK D V+
Sbjct: 526 RTTEEPGFALRFPRAVGFIRSDKRAEDANTVE 557
>gi|302781344|ref|XP_002972446.1| hypothetical protein SELMODRAFT_97073 [Selaginella moellendorffii]
gi|300159913|gb|EFJ26532.1| hypothetical protein SELMODRAFT_97073 [Selaginella moellendorffii]
Length = 638
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 98/200 (49%), Gaps = 37/200 (18%)
Query: 67 VDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIG 123
++E++ F + I + EG+++K L + +EP RS WLKLK +Y+ G LD++ IG
Sbjct: 428 LEEIQSFLDDAINHSCEGLIVKTLEKDATYEPAKRSNNWLKLKKDYMDTIGDSLDLVPIG 487
Query: 124 GYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDA--------VVT 175
++G G+R G FL+A + PD + S C++GTG ++ L+ V+
Sbjct: 488 AFHGRGKRVGVYGAFLLACYD---PDK--EEYQSICKIGTGFTEAVLEERSNTLRKHVID 542
Query: 176 KLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRSEV 231
+PY+R E DVW + E K+ LSI+ + E+
Sbjct: 543 TPRPYYRYGE----------------TLAVDVWFDPVEVWEVKAADLSISPVHKAAYGEL 586
Query: 232 -FSAPYSLRFPRIDRVRYDK 250
S SLRFPR+ R+R DK
Sbjct: 587 ETSKGISLRFPRLLRMREDK 606
>gi|320100861|ref|YP_004176453.1| ATP-dependent DNA ligase I [Desulfurococcus mucosus DSM 2162]
gi|319753213|gb|ADV64971.1| DNA ligase I, ATP-dependent Dnl1 [Desulfurococcus mucosus DSM 2162]
Length = 610
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 104/208 (50%), Gaps = 23/208 (11%)
Query: 65 HNVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLI 121
+ VDE+EKFF + I EG+++K L S ++ G R W+K K +Y D +D+++
Sbjct: 400 NKVDELEKFFLKAISEGAEGVMVKALHGDSIYQAGTRGWLWIKFKRDYRSEMVDTVDLVV 459
Query: 122 IGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYF 181
+G ++G GRRGG+ L+A A + F + C+VG+G DE+LD + LKPY
Sbjct: 460 VGAFHGKGRRGGKYGALLMA-----AYNDEKDVFETVCKVGSGFKDEDLDKLPEILKPYM 514
Query: 182 RKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFS-----APY 236
R +P+ V N + PDVW+E + I+ + + + + A
Sbjct: 515 RDRRHPR--------VVANME--PDVWVEPALVAEIIGAELTLSPVHTCAYGKVKSDAGI 564
Query: 237 SLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
S+RFPR R R DK D VE+
Sbjct: 565 SIRFPRFIRWRPDKSPEDATTSNELVEM 592
>gi|391345556|ref|XP_003747051.1| PREDICTED: DNA ligase 3 [Metaseiulus occidentalis]
Length = 900
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 97/189 (51%), Gaps = 14/189 (7%)
Query: 83 EGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGGEVAQFL 139
EG+VLKD SK+EPG R W+K+K +Y++ G+ D++++G Y+G+G++GG+++ FL
Sbjct: 540 EGLVLKDPQSKYEPGKRH--WMKVKKDYLQDGAMADSADLVVVGAYFGTGKKGGKMSIFL 597
Query: 140 VALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTN 199
+ +R+++ +V TG D+ L+ + +LK +K P + V
Sbjct: 598 MGCLNEKT-----KRWVTVTKVHTGHDDQTLENLQRELK--MKKISKNWELVPDWLDV-- 648
Query: 200 NSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQ 259
S+ PD P +S + IT + + S+RFPR+ R+R DK D +
Sbjct: 649 KSQLTPDFVAIDPFESQVWEITGAEFSKAEGHTANGISIRFPRVTRIRDDKLPKDATTLA 708
Query: 260 SFVELVHSS 268
L +S
Sbjct: 709 ELENLFKTS 717
>gi|383847368|ref|XP_003699326.1| PREDICTED: DNA ligase 3 [Megachile rotundata]
Length = 979
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 92/190 (48%), Gaps = 14/190 (7%)
Query: 83 EGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGGEVAQFL 139
EG+VLKD+ K+EPG R WLK+K +Y+ G+ D++++G +YG+G RGG ++ FL
Sbjct: 628 EGLVLKDVTGKYEPGKRH--WLKVKKDYLFDGAMADTADLVVLGAWYGTGNRGGMMSIFL 685
Query: 140 VALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTN 199
+ D +++ +V TG D L + +L + + P + P +
Sbjct: 686 MGCY-----DEDQGNWVTVTKVHTGHDDATLTMLQDELD-MIKIAKDPNKVP---KWLRA 736
Query: 200 NSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQ 259
N PD P+K + IT T + + S+RFPR+ ++R DK W +
Sbjct: 737 NKPMIPDFVARDPKKQPVWEITGAEFTNQGVHTADGISIRFPRVTKIRRDKDWSSATTLN 796
Query: 260 SFVELVHSSN 269
L +S+
Sbjct: 797 ELRRLFKTSS 806
>gi|354466771|ref|XP_003495846.1| PREDICTED: DNA ligase 3 isoform 3 [Cricetulus griseus]
Length = 955
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 101/208 (48%), Gaps = 24/208 (11%)
Query: 67 VDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIG 123
D + + +E +E G+VLKD+ +EPG R WLK+K +Y+ G+ D++++G
Sbjct: 644 ADMINRVIREGLE----GLVLKDVKGTYEPGKRH--WLKVKKDYLNEGAMADTADLVVLG 697
Query: 124 GYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRK 183
+YG G +GG ++ FL+ + PD+ ++ C G DA + +L+
Sbjct: 698 AFYGQGSKGGMMSIFLMGCYD---PDSQKWCTVTKCAGGHD------DATLARLQKELDM 748
Query: 184 YEYPKRAP--PSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA-PYSLRF 240
+ K PS+ ++ N PD + P+K+ + IT +SE +A S+RF
Sbjct: 749 VKISKDPSKIPSWLKI--NKIYYPDFIVSDPKKAAVWEITG-AEFSKSEAHTADGISIRF 805
Query: 241 PRIDRVRYDKPWHDCLDVQSFVELVHSS 268
PR R+R DK W ++ EL S
Sbjct: 806 PRCTRIRDDKDWKSATNLPQLKELYQLS 833
>gi|154417137|ref|XP_001581589.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121915818|gb|EAY20603.1| hypothetical protein TVAG_162990 [Trichomonas vaginalis G3]
Length = 679
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 100/225 (44%), Gaps = 41/225 (18%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-----RAG---- 114
A ++++ FF+E + NR EG+++K L ++E G R+ W KLK +YI + G
Sbjct: 469 ASKIEDLGDFFEEAVSNRTEGLMVKTLNGRYECGKRAMSWAKLKKDYISKEVFKGGVAEE 528
Query: 115 ---SDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELD 171
+DV++IG YG G+R FLV + + + S C VGTG +++L
Sbjct: 529 IPPDTIDVVVIGATYGKGKRTSVYGAFLVGVY-----NNVTGKVESLCFVGTGFKEDDL- 582
Query: 172 AVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERP---DVWIESPEKSIILSI-TSDIRTI 227
K Y K P + +N RP D PE ++ I +DI+T
Sbjct: 583 -----------KEFYEKLHPLEMEKCPDNVDCRPLDQDPVFFKPE--LVWEIQVADIQTT 629
Query: 228 RS------EVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVH 266
+ E+ ++RF R R R DK W + +EL H
Sbjct: 630 PTYSACWGELGEKGLTIRFGRYYRTRTDKTWEQSTSTEQLLELYH 674
>gi|432328175|ref|YP_007246319.1| ATP-dependent DNA ligase I [Aciduliprofundum sp. MAR08-339]
gi|432134884|gb|AGB04153.1| ATP-dependent DNA ligase I [Aciduliprofundum sp. MAR08-339]
Length = 589
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 104/209 (49%), Gaps = 18/209 (8%)
Query: 62 LVAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEY-IRAGSDLD 118
+V+ ++ E++ FF IE+ EG+V K++G S + G R W+K K +Y + G +D
Sbjct: 384 IVSSDISEIKDFFNHAIEDGCEGLVAKNVGEESIYRAGAREFLWIKYKKDYKVEMGDTVD 443
Query: 119 VLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLK 178
++++G + G GRR G L+A A P D RF + C++G+G +DE+L L
Sbjct: 444 LVVVGAFAGKGRRKGTYGALLMA-AYNPEKD----RFETVCKLGSGFTDEQL----AHLP 494
Query: 179 PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVF--SAPY 236
F + + KR P + ++ + P V +E I LS T T +V +
Sbjct: 495 KKFEELKIEKRHPRVWSKMDADYWFVPKVVLEVIGAEITLSPT---HTCARDVVEKGSGL 551
Query: 237 SLRFPRI-DRVRYDKPWHDCLDVQSFVEL 264
++RFPR R R DK + + VE+
Sbjct: 552 AIRFPRFTGRWRDDKSPEEATTTKELVEM 580
>gi|281341925|gb|EFB17509.1| hypothetical protein PANDA_012829 [Ailuropoda melanoleuca]
Length = 1015
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 115/246 (46%), Gaps = 36/246 (14%)
Query: 29 MNDGICVCVHVYMLSQLRSQIMAADQTGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLK 88
++D + + M S+++ AAD D + + +E +E G+VLK
Sbjct: 618 LHDNMVEIPNRIMFSEMKQVTKAADLA------------DMINRVIREGLE----GLVLK 661
Query: 89 DLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGGEVAQFLVALAER 145
D+ +EPG R WLK+K +Y+ G+ D++++G +YG G +GG ++ FL+ +
Sbjct: 662 DVKGTYEPGKR--HWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGGMMSIFLMGCYD- 718
Query: 146 PAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAP--PSFYQVTNNSKE 203
PD+ +C V T S DA + +L+ + K PS+ ++ N
Sbjct: 719 --PDSQ-----KWCTV-TKCSGGHDDATLARLQKELDMVKISKDPSKIPSWLKI--NKTY 768
Query: 204 RPDVWIESPEKSIILSITSDIRTIRSEVFSA-PYSLRFPRIDRVRYDKPWHDCLDVQSFV 262
PD + P+K+ + IT +SE +A S+RFPR R+R DK W ++
Sbjct: 769 YPDFIVPDPKKAAVWEITG-AEFSKSEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLK 827
Query: 263 ELVHSS 268
EL S
Sbjct: 828 ELYQLS 833
>gi|163784943|ref|ZP_02179698.1| ATP-dependent DNA ligase [Hydrogenivirga sp. 128-5-R1-1]
gi|159879790|gb|EDP73539.1| ATP-dependent DNA ligase [Hydrogenivirga sp. 128-5-R1-1]
Length = 205
Score = 79.7 bits (195), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 107/212 (50%), Gaps = 32/212 (15%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLII 122
NVD++E FF + IE+ EG+V K L S ++ G R W+K K +Y +D LD+++I
Sbjct: 4 NVDDLESFFLQAIEDGCEGLVCKSLQKDSIYQAGKRGFLWIKYKRDYKSHLADTLDLVVI 63
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
G +YG G+R L+A + P+T +F + C+VG+G ++++ + + LK +
Sbjct: 64 GAFYGKGQRAQYFGSLLMACYD---PET--DQFKTVCKVGSGFTEDDFEKLDELLKAHQI 118
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPY------ 236
++++P+ NS D+W E ++L IT T+ S V + +
Sbjct: 119 RHKHPR----------VNSILSADIWYEP---YLVLEITGAELTL-SPVHTCAWDKIKPS 164
Query: 237 ---SLRFPRI-DRVRYDKPWHDCLDVQSFVEL 264
LRFPR R R+DK D + +E+
Sbjct: 165 RGLGLRFPRFTGRYRFDKRPEDATTEKEIIEM 196
>gi|118387305|ref|XP_001026764.1| DNA ligase I, ATP-dependent [Tetrahymena thermophila]
gi|89308531|gb|EAS06519.1| DNA ligase I, ATP-dependent [Tetrahymena thermophila SB210]
Length = 635
Score = 79.7 bits (195), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 96/199 (48%), Gaps = 27/199 (13%)
Query: 63 VAHNVDEVEKFFKETIENRDEGIVLKDLGSK--WEPGDRSGKWLKLKPEYIRAG--SDLD 118
+ + DE++K K+ I+ ++EG ++K L S ++ R+ +W KLK + + G D
Sbjct: 421 IQKDFDELKKLVKQYIDQKEEGAMVKSLDSNTFYDNNGRT-QWAKLKKQVLSGGLADTFD 479
Query: 119 VLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLK 178
V+ I YYG G+R G +L+A D + +++ C++GTG SD+ L +LK
Sbjct: 480 VIPIAAYYGKGKRSGVYGSYLLA-----CYDDKKKEYVALCKIGTGFSDQFLQDSTDRLK 534
Query: 179 PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSD------IRTIRSEVF 232
+ P Y V K PDVW + + + + SD I TI +
Sbjct: 535 ------QKVCSQKPKEYSVHRTFK--PDVWFQKDAE--VWEVESDSLSSSPIYTIGKMNY 584
Query: 233 S-APYSLRFPRIDRVRYDK 250
S SLRFPR RVR DK
Sbjct: 585 SDNGISLRFPRFLRVRDDK 603
>gi|449479669|ref|XP_004177044.1| PREDICTED: LOW QUALITY PROTEIN: DNA ligase 3 [Taeniopygia guttata]
Length = 896
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 95/190 (50%), Gaps = 16/190 (8%)
Query: 83 EGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGGEVAQFL 139
EG+VLKD+ +EPG R WLK+K +Y+ G+ D++++G +YG G +GG ++ FL
Sbjct: 559 EGLVLKDIKGNYEPGKRH--WLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGGMMSIFL 616
Query: 140 VALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTN 199
+ + P T ++ + + G D L + T+L + + P + P +
Sbjct: 617 MGCYD---PKT--EKWCTVTKCAGGHDDATLARLQTELD-MVKISKDPSKIP---RWLKI 667
Query: 200 NSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA-PYSLRFPRIDRVRYDKPWHDCLDV 258
N PD + P+K+ + IT ++E +A S+RFPR R+R DK W ++
Sbjct: 668 NKIYYPDFIVPDPKKAPVWEITG-AEFSKAEAHTADGISIRFPRCTRIRDDKDWQTATNL 726
Query: 259 QSFVELVHSS 268
Q EL S
Sbjct: 727 QQLKELYQLS 736
>gi|167378394|ref|XP_001734783.1| DNA ligase [Entamoeba dispar SAW760]
gi|165903537|gb|EDR29037.1| DNA ligase, putative [Entamoeba dispar SAW760]
Length = 686
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 96/200 (48%), Gaps = 28/200 (14%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLII 122
N +++ FF+E I +R EG++ K L +++ P R+ W KLK +Y+ +D +D++ +
Sbjct: 461 NEEDILPFFEEAINHRTEGLMCKTLVYDAEYIPDKRTDTWYKLKKDYLNGLADTVDLVPV 520
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
G + G G+R G FL+A + + D F + +VGTG SDE L +
Sbjct: 521 GAWMGEGKRAGVYGAFLLACRDEDSGD-----FETVTKVGTGFSDEALQKL--------- 566
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVW--------IESPEKSIILSITSDIRTIRSEVFSA 234
YE+ K + + PDVW I+ + S+ L + I+ + +E
Sbjct: 567 -YEHLKTLECKEKKNVKHGDNLPDVWFEPKDVWEIKGADLSLSLQYRAGIKLVNTE--GR 623
Query: 235 PYSLRFPRIDRVRYDKPWHD 254
LRFPR R R DK +D
Sbjct: 624 GVCLRFPRYIRTRDDKEVND 643
>gi|301776466|ref|XP_002923661.1| PREDICTED: DNA ligase 3-like [Ailuropoda melanoleuca]
Length = 996
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 115/246 (46%), Gaps = 36/246 (14%)
Query: 29 MNDGICVCVHVYMLSQLRSQIMAADQTGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLK 88
++D + + M S+++ AAD D + + +E +E G+VLK
Sbjct: 618 LHDNMVEIPNRIMFSEMKQVTKAADLA------------DMINRVIREGLE----GLVLK 661
Query: 89 DLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGGEVAQFLVALAER 145
D+ +EPG R WLK+K +Y+ G+ D++++G +YG G +GG ++ FL+ +
Sbjct: 662 DVKGTYEPGKRH--WLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGGMMSIFLMGCYD- 718
Query: 146 PAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAP--PSFYQVTNNSKE 203
PD+ +C V T S DA + +L+ + K PS+ ++ N
Sbjct: 719 --PDSQ-----KWCTV-TKCSGGHDDATLARLQKELDMVKISKDPSKIPSWLKI--NKTY 768
Query: 204 RPDVWIESPEKSIILSITSDIRTIRSEVFSA-PYSLRFPRIDRVRYDKPWHDCLDVQSFV 262
PD + P+K+ + IT +SE +A S+RFPR R+R DK W ++
Sbjct: 769 YPDFIVPDPKKAAVWEITG-AEFSKSEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLK 827
Query: 263 ELVHSS 268
EL S
Sbjct: 828 ELYQLS 833
>gi|354466769|ref|XP_003495845.1| PREDICTED: DNA ligase 3 isoform 2 [Cricetulus griseus]
gi|344238283|gb|EGV94386.1| DNA ligase 3 [Cricetulus griseus]
Length = 1014
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 104/206 (50%), Gaps = 20/206 (9%)
Query: 67 VDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIG 123
D + + +E +E G+VLKD+ +EPG R WLK+K +Y+ G+ D++++G
Sbjct: 644 ADMINRVIREGLE----GLVLKDVKGTYEPGKRH--WLKVKKDYLNEGAMADTADLVVLG 697
Query: 124 GYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRK 183
+YG G +GG ++ FL+ + PD+ +++ + + G D L A + K +
Sbjct: 698 AFYGQGSKGGMMSIFLMGCYD---PDS--QKWCTVTKCAGGHDDATL-ARLQKELDMVKI 751
Query: 184 YEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA-PYSLRFPR 242
+ P + P S+ ++ N PD + P+K+ + IT +SE +A S+RFPR
Sbjct: 752 SKDPSKIP-SWLKI--NKIYYPDFIVSDPKKAAVWEITG-AEFSKSEAHTADGISIRFPR 807
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSS 268
R+R DK W ++ EL S
Sbjct: 808 CTRIRDDKDWKSATNLPQLKELYQLS 833
>gi|126458667|ref|YP_001054945.1| ATP-dependent DNA ligase [Pyrobaculum calidifontis JCM 11548]
gi|166215376|sp|A3MS62.1|DNLI_PYRCJ RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|126248388|gb|ABO07479.1| DNA ligase I, ATP-dependent Dnl1 [Pyrobaculum calidifontis JCM
11548]
Length = 583
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 99/209 (47%), Gaps = 28/209 (13%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGG 124
++V+ FF E + EG++ K S +E G R W+K K +Y D +D++++G
Sbjct: 383 GAEDVDLFFHEAVSLGTEGLICKSPTSTYEMGARGWNWIKYKRDYRSEMIDTVDLVVVGA 442
Query: 125 YYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKY 184
++G G+R G FL+A A P+ D F + C+VG+G +D +L + L+P +
Sbjct: 443 FHGRGKRAGLYGAFLLA-AYDPSTDM----FYTVCKVGSGFTDADLRRMYDMLQPLKIPH 497
Query: 185 EYPKRAPPSFYQVTNNSKERPDVW------IESPEKSIILSI--TSDIRTIRSEVFSAPY 236
+P+ SK +PDVW IE I LS T I ++ V A
Sbjct: 498 RHPRVV----------SKMQPDVWFVPQVVIEVIGAEITLSPLHTCCIGAVKPGVGLA-- 545
Query: 237 SLRFPRI-DRVRYDKPWHDCLDVQSFVEL 264
+RFPR R R DK D + VE+
Sbjct: 546 -IRFPRFTGRYRTDKRPEDATTTKELVEM 573
>gi|170289998|ref|YP_001736814.1| ATP-dependent DNA ligase I [Candidatus Korarchaeum cryptofilum
OPF8]
gi|224487898|sp|B1L3V2.1|DNLI2_KORCO RecName: Full=DNA ligase 2; AltName: Full=Polydeoxyribonucleotide
synthase [ATP] 2
gi|170174078|gb|ACB07131.1| DNA ligase I, ATP-dependent Dnl1 [Candidatus Korarchaeum
cryptofilum OPF8]
Length = 594
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 97/202 (48%), Gaps = 15/202 (7%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIGG 124
NV+E+E+FF+ +E EG+V+KD S ++ G R W+KLK YI + +D++++G
Sbjct: 386 NVEELERFFEHAVEMGTEGLVVKDPKSIYQAGVRGWSWIKLKRSYISKMIEPVDLVVVGA 445
Query: 125 YYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKY 184
++G G+R G L+A A P D F + C++G+G +DEEL ++ Y
Sbjct: 446 FWGKGKRAGTYGALLMA-AYSPEEDV----FKTVCKMGSGFTDEEL----ARMPKLLEDY 496
Query: 185 EYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDI--RTIRSEVFSAPYSLRFPR 242
+ + P + + P + I LS T +R +A ++RFPR
Sbjct: 497 KIDHKHPSVISNIEADVYFVPVKVAQVLGDEITLSPTHTCGWNKVRK---NAGLAIRFPR 553
Query: 243 IDRVRYDKPWHDCLDVQSFVEL 264
R DK D + +E+
Sbjct: 554 FMGWRDDKGPQDATTEEEIIEM 575
>gi|145590341|ref|YP_001152343.1| ATP-dependent DNA ligase [Pyrobaculum arsenaticum DSM 13514]
gi|166215375|sp|A4WH24.1|DNLI_PYRAR RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|145282109|gb|ABP49691.1| DNA ligase I, ATP-dependent Dnl1 [Pyrobaculum arsenaticum DSM
13514]
Length = 584
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 96/201 (47%), Gaps = 16/201 (7%)
Query: 68 DEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYY 126
D V+ FF E + EG++ K S++E G R W+K K +Y D +D++++G +Y
Sbjct: 385 DTVDVFFHEAVSVGTEGLICKSPTSEYEMGARGWNWIKYKRDYKSEMIDTVDLVVVGAFY 444
Query: 127 GSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEY 186
G G+R G FL+A A P+ D F + C+VG+G +D +L + L+P +
Sbjct: 445 GRGKRAGLYGAFLLA-AYDPSSDM----FYTVCKVGSGFTDADLKKMYEILQP----LKI 495
Query: 187 PKRAPPSFYQVTNNSKERPDVWIESPEKSIILSI--TSDIRTIRSEVFSAPYSLRFPRI- 243
P R P ++ + P V IE I LS T + +R V A +RFPR
Sbjct: 496 PHRHPRVSSKMEADVWFVPQVVIEVIGAEITLSPLHTCCLGAVRPGVGLA---VRFPRFT 552
Query: 244 DRVRYDKPWHDCLDVQSFVEL 264
R R DK V +EL
Sbjct: 553 GRYRTDKGPEQATTVAEMLEL 573
>gi|397626161|gb|EJK68053.1| hypothetical protein THAOC_10812, partial [Thalassiosira oceanica]
Length = 704
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 100/190 (52%), Gaps = 22/190 (11%)
Query: 70 VEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYY 126
+E+F ++ + EG+++K D+ + +EP RS WLKLK +Y+ G +D++ +G Y+
Sbjct: 440 IEEFLDAAVKGQCEGLMVKTLDVNAVYEPDRRSLNWLKLKKDYLEGLGDSVDLVPLGAYH 499
Query: 127 GSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEY 186
G G+R G +L+A D F S C++GTG S+E+L ++ LK +
Sbjct: 500 GRGKRTGVYGAYLLA-----CYDYDTEEFQSVCKIGTGFSEEDLKSLAADLKGHV----I 550
Query: 187 PKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRSEVFSA--PYSLRF 240
P+++ S Y V++ DVW ++ K+ LS +S + + A LRF
Sbjct: 551 PEKS--SQYVVSDTLA--CDVWFDAVRVWEVKAADLSKSSTHKGAIDKTGDAGRGIGLRF 606
Query: 241 PRIDRVRYDK 250
PR +RVR DK
Sbjct: 607 PRFERVRPDK 616
>gi|124027312|ref|YP_001012632.1| ATP-dependent DNA ligase [Hyperthermus butylicus DSM 5456]
gi|224487885|sp|A2BJX6.1|DNLI_HYPBU RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|123978006|gb|ABM80287.1| ATP-dependent DNA ligase [Hyperthermus butylicus DSM 5456]
Length = 608
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/212 (33%), Positives = 108/212 (50%), Gaps = 23/212 (10%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRAGSD-L 117
+V + E+E FF + IE+ EG++ K + S ++ G R W+K K +Y SD +
Sbjct: 395 GIVTSDPQELESFFLKAIEDGAEGVMAKAIHDRSIYQAGARGWLWIKYKRDYKSEMSDTV 454
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 177
D+++IG +YG GRRGG+ L+A A P DT F S C+VG+G +DE+L+ + L
Sbjct: 455 DLVVIGAFYGKGRRGGKFGALLMA-AYDPDTDT----FKSVCKVGSGFTDEDLERLDDML 509
Query: 178 KPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVF----- 232
KPY + P R +S+ +PDVW+E + I+ + I + +
Sbjct: 510 KPYISD-KKPARV---------DSQMKPDVWVEPTLVAEIIGAELTLSPIHTCCYGWVKS 559
Query: 233 SAPYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
A S+RFPR R R DK D + E+
Sbjct: 560 GAGISIRFPRFIRWRPDKGPEDATTTKELYEM 591
>gi|307595638|ref|YP_003901955.1| ATP-dependent DNA ligase I [Vulcanisaeta distributa DSM 14429]
gi|307550839|gb|ADN50904.1| DNA ligase I, ATP-dependent Dnl1 [Vulcanisaeta distributa DSM
14429]
Length = 607
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 106/218 (48%), Gaps = 31/218 (14%)
Query: 59 CWSLVAHNVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYIRAGSD 116
W ++ ++ +E++KFF E I + EG++ K + S +E G R W+K K +Y +D
Sbjct: 394 TWRII-NDAEELDKFFHEAISDGCEGVMCKSIKADSIYEMGARGWLWIKYKRDYRSELTD 452
Query: 117 -LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVT 175
LD++++G ++G G+R G L+A A P D +F + +VG+G +DE+L +
Sbjct: 453 TLDLVVVGAFWGRGKRAGTYGALLIA-AYDPKTD----QFYTVSKVGSGFTDEDLVKLKQ 507
Query: 176 KLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVW------IESPEKSIILSI--TSDIRTI 227
L PY +++P+ SK PDVW +E I LS T + I
Sbjct: 508 MLDPYRIPHKHPRVV----------SKMEPDVWFVPAVVLEIIGAEITLSPLHTCCMGAI 557
Query: 228 RSEVFSAPYSLRFPRI-DRVRYDKPWHDCLDVQSFVEL 264
R V A +RFPR R R DK V +E+
Sbjct: 558 RPGVGLA---IRFPRFTGRYRTDKSPEQATTVDEILEM 592
>gi|407043431|gb|EKE41951.1| ATP-dependent DNA ligase domain containing protein [Entamoeba
nuttalli P19]
Length = 687
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 96/200 (48%), Gaps = 28/200 (14%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLII 122
N +++ FF+E I +R EG++ K L +++ P R+ W KLK +Y+ +D +D++ +
Sbjct: 462 NEEDILPFFEEAINHRTEGLMCKTLIYDAEYIPDKRTDTWYKLKKDYLNGLADTVDLVPV 521
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
G + G G+R G FL+A + + D F + +VGTG SDE L +
Sbjct: 522 GAWMGEGKRAGVYGAFLLACRDEDSGD-----FETVTKVGTGFSDEALQKL--------- 567
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVW--------IESPEKSIILSITSDIRTIRSEVFSA 234
YE+ K + + PDVW I+ + S+ L + I+ + +E
Sbjct: 568 -YEHLKTLECKEKKNVKHGDNLPDVWFEPKDVWEIKGADLSLSLQYKAGIKLVNTE--GR 624
Query: 235 PYSLRFPRIDRVRYDKPWHD 254
LRFPR R R DK +D
Sbjct: 625 GVCLRFPRYIRSRDDKEVND 644
>gi|313679806|ref|YP_004057545.1| DNA ligase i, ATP-dependent dnl1 [Oceanithermus profundus DSM
14977]
gi|313152521|gb|ADR36372.1| DNA ligase I, ATP-dependent Dnl1 [Oceanithermus profundus DSM
14977]
Length = 571
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 95/206 (46%), Gaps = 22/206 (10%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGG 124
+E+ +FF +IE EG+V K +E G R KW+K K SD LD++I+G
Sbjct: 375 TTEELVQFFDASIEAGCEGLVCKKPDGDYEAGKRGFKWVKYKRGIAGKLSDTLDLVIVGA 434
Query: 125 YYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVT-KLKPYFRK 183
+ G GRR G L A A P D RF + +VG+G SDE+L+ V+ +L PY R
Sbjct: 435 WLGRGRRAGTYGSLLAA-AYNPDED----RFETLTKVGSGFSDEDLNEVLPRRLDPYRRG 489
Query: 184 YEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA-----PYSL 238
+P+ S PDVW E + + + + + F A +L
Sbjct: 490 ERHPR----------VWSLLEPDVWFEPVQVIEVEAQEITLSPNHTCAFGAVQEGRGLAL 539
Query: 239 RFPRIDRVRYDKPWHDCLDVQSFVEL 264
RFPR R R DK + + VE+
Sbjct: 540 RFPRFVRYRDDKSPEEATTTKEVVEM 565
>gi|374327751|ref|YP_005085951.1| DNA ligase [Pyrobaculum sp. 1860]
gi|356643020|gb|AET33699.1| DNA ligase [Pyrobaculum sp. 1860]
Length = 563
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 108/239 (45%), Gaps = 17/239 (7%)
Query: 39 VYMLSQLRSQIMAADQTGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGD 98
+Y +L + +D+ W + + D V+ FF E++ EG++ K S +E G
Sbjct: 336 IYRRVKLSEIVKESDKVSIAKWRIF-DDPDSVDVFFHESVSMGTEGLICKSPTSVYEMGA 394
Query: 99 RSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFIS 157
R W+K K +Y D +D++++G ++G G+R G FL+A A P+ D F +
Sbjct: 395 RGWNWIKYKRDYRSEMIDTVDLVVVGAFHGRGKRAGLYGAFLLA-AYDPSTDM----FYT 449
Query: 158 FCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSII 217
C+VG+G +D +L + L+P + P R P ++ + P V IE I
Sbjct: 450 VCKVGSGFTDADLKKMYETLQP----LKLPHRHPRVVSKMEADVWFVPQVVIEVIGAEIT 505
Query: 218 LSI--TSDIRTIRSEVFSAPYSLRFPRI-DRVRYDKPWHDCLDVQSFVELVHSSNGTTQ 273
LS T + +R V A +RFPR R R DK V +EL Q
Sbjct: 506 LSPLHTCCLGAVRPGVGLA---VRFPRFTGRYRSDKSPEQATTVAEMLELYKRQKKVAQ 561
>gi|356567248|ref|XP_003551833.1| PREDICTED: uncharacterized protein LOC100807673 [Glycine max]
Length = 1402
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 103/219 (47%), Gaps = 40/219 (18%)
Query: 66 NVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLII 122
+ ++ F ++ + + EGI++K D+ + + P RS KWLK+K +Y+ +D LD++ I
Sbjct: 1196 TLTKINAFLEDALRSSCEGIMVKTLDVDAGYSPSKRSDKWLKVKRDYVEGLNDTLDLVPI 1255
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
G ++G+GR+ G + FL+A P+T + S CRV +G S D+ ++K +F
Sbjct: 1256 GAWHGNGRKAGWYSPFLMACFN---PET--EEYQSVCRVMSGFS----DSFYIEMKQFFS 1306
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWI--------------ESPEKSIILSITSDIRTIR 228
+ + PP +YQ ++E PD+W SP + + R I
Sbjct: 1307 GDKVLSKKPP-YYQ----TREAPDMWFCPQVVWEIRGADFTVSPVHHAAIGLVHPSRGI- 1360
Query: 229 SEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 267
S+RFPR D+ +C E+ HS
Sbjct: 1361 --------SIRFPRFISCVSDRSPEECSTAADIGEMFHS 1391
>gi|19550955|gb|AAL91592.1|AF491645_1 ligase III, DNA, ATP-dependent [Homo sapiens]
gi|1113939|gb|AAA85022.1| DNA ligase III [Homo sapiens]
Length = 862
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 97/196 (49%), Gaps = 16/196 (8%)
Query: 77 TIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGG 133
I+ EG+VLKD+ +EPG R WLK+K +Y+ G+ D++++G +YG G +GG
Sbjct: 562 VIQEGLEGLVLKDVKGTYEPGKRH--WLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGG 619
Query: 134 EVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPS 193
++ FL+ D +++ + + G D L + +L + + P + P S
Sbjct: 620 MMSIFLMGCY-----DPGSQKWCTVTKCAGGHDDATLARLQNELD-MVKISKDPSKIP-S 672
Query: 194 FYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA-PYSLRFPRIDRVRYDKPW 252
+ +V N PD + P+K+ + IT +SE +A S+RFPR R+R DK W
Sbjct: 673 WLKV--NKIYYPDFIVPDPKKAAVWEITG-AEFSKSEAHTADGISIRFPRCTRIRDDKDW 729
Query: 253 HDCLDVQSFVELVHSS 268
++ EL S
Sbjct: 730 KSATNLPQLKELYQLS 745
>gi|448570964|ref|ZP_21639475.1| DNA ligase, ATP dependent [Haloferax lucentense DSM 14919]
gi|448595860|ref|ZP_21653307.1| DNA ligase, ATP dependent [Haloferax alexandrinus JCM 10717]
gi|445722882|gb|ELZ74533.1| DNA ligase, ATP dependent [Haloferax lucentense DSM 14919]
gi|445742314|gb|ELZ93809.1| DNA ligase, ATP dependent [Haloferax alexandrinus JCM 10717]
Length = 585
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 93/198 (46%), Gaps = 30/198 (15%)
Query: 62 LVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVLI 121
L++ + DE+ + + ++ R EGI+LK+ + + PGDR WLK KP+ LD+++
Sbjct: 407 LLSDDPDEIAAYEADALDARHEGIMLKNPDAPYSPGDRGKNWLKRKPDV----ETLDLVV 462
Query: 122 IGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYF 181
G +G GRR + FL L+ R ++ F + +V TG++DEEL + L+P
Sbjct: 463 TGAEWGEGRRAEFLGTFL--LSARVEAESGDDAFETIGKVATGITDEELAELTDLLEPEI 520
Query: 182 RKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFP 241
+ + RP V E + I S T +S+ Y+LRFP
Sbjct: 521 ER------------EAGKEVDIRPSVVFEVGYEEIQASPT----------YSSGYALRFP 558
Query: 242 RIDRVRYDKPWH--DCLD 257
R VR DK D LD
Sbjct: 559 RFVTVREDKTAETADSLD 576
>gi|255918063|pdb|3II6|X Chain X, Structure Of Human Xrcc4 In Complex With The Tandem Brct
Domains Of Dna Ligaseiv.
gi|255918064|pdb|3II6|Y Chain Y, Structure Of Human Xrcc4 In Complex With The Tandem Brct
Domains Of Dna Ligaseiv
Length = 263
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 118/269 (43%), Gaps = 25/269 (9%)
Query: 319 TSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMNLNNSVTHCVAADNKGLKYE--AA 376
++IF D+ F ++ + L + E GG N T+CV A ++ ++ +
Sbjct: 8 SNIFEDVEFCVMSGTDSQPKPDLENRIAEFGGYIVQNPGPD-TYCVIAGSENIRVKNIIL 66
Query: 377 KRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEVDEFSDLYFWDLDLADI 436
+ DV+ +W+L+C K + QP++ +H+ S+K+ E D + D YF D DL +
Sbjct: 67 SNKHDVVKPAWLLECFKTKSFVPWQPRFMIHMCPSTKEHFAREYDCYGDSYFIDTDLNQL 126
Query: 437 KQLLSNVDRSED--PKTIDYYKKKYCPQDKWSC-----FHGCCIYF--YHSTEPLSPDWE 487
K++ S + S + P+ + + W C F +Y Y LS E
Sbjct: 127 KEVFSGIKNSNEQTPEEMASLIADLEYRYSWDCSPLSMFRRHTVYLDSYAVINDLSTKNE 186
Query: 488 VLLGLALRRLKLEISFHGGKVCNNLA-NATHVVVLSVLGYDVNFNSLTESFTAREKHLLW 546
G L LE+ FHG KV + LA +HV++ +F + +F
Sbjct: 187 ---GTRLAIKALELRFHGAKVVSCLAEGVSHVIIGEDHSRVADFKAFRRTF--------- 234
Query: 547 NKKLHVVRSQWLEDCLAKEQKSEEYEYSL 575
+K +++ W+ D + K + EE +Y +
Sbjct: 235 KRKFKILKESWVTDSIDKCELQEENQYLI 263
>gi|860963|emb|CAA59230.1| DNA ligase III [Homo sapiens]
Length = 922
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 97/196 (49%), Gaps = 16/196 (8%)
Query: 77 TIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGG 133
I+ EG+VLKD+ +EPG R WLK+K +Y+ G+ D++++G +YG G +GG
Sbjct: 562 VIQEGLEGLVLKDVKGTYEPGKRH--WLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGG 619
Query: 134 EVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPS 193
++ FL+ D +++ + + G D L + +L + + P + P S
Sbjct: 620 MMSIFLMGCY-----DPGSQKWCTVTKCAGGHDDATLARLQNELD-MVKISKDPSKIP-S 672
Query: 194 FYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA-PYSLRFPRIDRVRYDKPW 252
+ +V N PD + P+K+ + IT +SE +A S+RFPR R+R DK W
Sbjct: 673 WLKV--NKIYYPDFIVPDPKKAAVWEITG-AEFSKSEAHTADGISIRFPRCTRIRDDKDW 729
Query: 253 HDCLDVQSFVELVHSS 268
++ EL S
Sbjct: 730 KSATNLPQLKELYQLS 745
>gi|269986752|gb|EEZ93032.1| DNA ligase I, ATP-dependent Dnl1 [Candidatus Parvarchaeum
acidiphilum ARMAN-4]
Length = 577
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 116/244 (47%), Gaps = 32/244 (13%)
Query: 44 QLRSQIMAADQTGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKW 103
+L ++ + T ++ N +++KFF TIE EGIV K L S + G R+ W
Sbjct: 355 ELLDKLFSNTNTISKTKMIITDNEKDIDKFFDLTIEQGLEGIVAKRLDSTYSAGARNFNW 414
Query: 104 LKLKPEYIRAGSD-LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVG 162
+K+K Y +D +D++I+G + G G+R A F + D+ +F S +VG
Sbjct: 415 IKMKRSYKSKLNDTIDLVILGYFKGRGQR----ASFGLGAVLAGVYDSKEDKFKSITKVG 470
Query: 163 TGLSDE---ELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILS 219
+G S+E +L ++ ++K + P R +S +PDVW+ P+ +++
Sbjct: 471 SGFSEEQFKQLFKILNEIKVDIK----PARV---------DSIMQPDVWV-VPK--YVIA 514
Query: 220 ITSDIRTIRSEVFSA------PYSLRFPR-IDRVRYDKPWHDCLDVQSFVELVHSSNGTT 272
+ +D RS +A Y+LRFPR + +R DK D V +E+ + +
Sbjct: 515 VKAD-EITRSPTHTAGMKDGIGYALRFPRAVSFIRTDKKAEDANSVNDIIEMYNEQKNIS 573
Query: 273 QKGK 276
K +
Sbjct: 574 VKNQ 577
>gi|15606583|ref|NP_213963.1| ATP-dependent DNA ligase [Aquifex aeolicus VF5]
gi|2983805|gb|AAC07362.1| DNA ligase (ATP dependent) [Aquifex aeolicus VF5]
Length = 585
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 102/215 (47%), Gaps = 32/215 (14%)
Query: 63 VAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRAGSD-LDV 119
+ NV+++E FF + IE EG+V K L S ++ G R W+K K +Y +D LD+
Sbjct: 379 IVDNVEDLENFFYQAIEEGCEGLVCKSLAPNSIYQAGKRGFLWIKYKRDYKSVLADTLDL 438
Query: 120 LIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 179
+++GG+YG G+R G L+A + P D F + +VGTG ++++ + L P
Sbjct: 439 VVVGGFYGKGQRKGTFGSLLMACYD-PESDM----FKTVTKVGTGFTEDDFKKLEEILMP 493
Query: 180 YFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPY--- 236
+ +P+ NS D+W E ++L IT T+ S V + +
Sbjct: 494 RKLNHRHPR----------VNSILEADMWFEP---YLVLEITGAELTL-SPVHTCGWGKV 539
Query: 237 ------SLRFPRI-DRVRYDKPWHDCLDVQSFVEL 264
LRFPR R R+DK D Q +E+
Sbjct: 540 SPNRGIGLRFPRFTGRYRFDKRPEDATTEQEIIEM 574
>gi|307105557|gb|EFN53806.1| hypothetical protein CHLNCDRAFT_136511 [Chlorella variabilis]
Length = 1506
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 100/212 (47%), Gaps = 38/212 (17%)
Query: 68 DEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYY 126
+ +++ + EG++LK L + +EP RS W+K+K +Y+ D LD+++IG ++
Sbjct: 1261 ERLQEMLLQAFAAGAEGLMLKKLAAAYEPSKRSDHWIKVKKDYVVGLHDTLDLVVIGAWH 1320
Query: 127 GSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSD-------EELD-AVVTKLK 178
G+GR+ G + +L+A + PDT + S CR +G +D E L ++ K
Sbjct: 1321 GNGRKAGWFSPYLLACYD---PDT--EQLQSVCRCMSGFTDAFYRESKERLSQTIIPGHK 1375
Query: 179 PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRSEVFSA 234
PY+ N+ E+PD+W E E + LS++ + V +
Sbjct: 1376 PYY------------------NTGEQPDMWFEPREVWEIRGADLSLSPVHKAAEGLVHAE 1417
Query: 235 -PYSLRFPR-IDRVRYDKPWHDCLDVQSFVEL 264
LRFPR + RVR DK D Q E+
Sbjct: 1418 RGLGLRFPRFLGRVRQDKSPEDATSSQQIAEM 1449
>gi|296477017|tpg|DAA19132.1| TPA: DNA ligase (ATP) 3 [Bos taurus]
Length = 943
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 102/206 (49%), Gaps = 20/206 (9%)
Query: 67 VDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIG 123
VD + + +E +E G+VLKD+ +EPG R WLK+K +Y+ G+ D++++G
Sbjct: 645 VDMINRVIQEGLE----GLVLKDVKGTYEPGKRH--WLKVKKDYLNEGAMADTADLVVLG 698
Query: 124 GYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRK 183
+YG G +GG ++ FL+ D +++ + + G D L + T+L +
Sbjct: 699 AFYGQGSKGGMMSIFLMGCY-----DPSSQKWCTVTKCAGGHDDATLARLQTELD-MVKI 752
Query: 184 YEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA-PYSLRFPR 242
+ P + P ++ ++ N PD + P+K+ + IT +SE +A S+RFPR
Sbjct: 753 SKDPSKIP-NWLKI--NKIYYPDFIVPDPKKAAVWEITG-AEFSKSEAHTADGISIRFPR 808
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSS 268
R+R DK W + EL S
Sbjct: 809 CTRIRDDKDWKSATTLPQLKELYQLS 834
>gi|441677235|ref|XP_003278419.2| PREDICTED: LOW QUALITY PROTEIN: DNA ligase 3 [Nomascus leucogenys]
Length = 1007
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 101/208 (48%), Gaps = 24/208 (11%)
Query: 67 VDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIG 123
D + + +E +E G+VLKD+ +EPG R WLK+K +Y+ G+ D++++G
Sbjct: 641 ADMITRVIREGLE----GLVLKDVKGTYEPGKR--HWLKVKKDYLNEGAMADTADLVVLG 694
Query: 124 GYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRK 183
+YG G +GG ++ FL+ + P + C V T + DA +T+L+
Sbjct: 695 AFYGQGSKGGMMSIFLMGCYD-PGSQKW-------CTV-TKCAGGHDDATLTRLQKELDM 745
Query: 184 YEYPKRAP--PSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA-PYSLRF 240
+ K PS+ +V N PD + P+K+ + IT +SE +A S+RF
Sbjct: 746 VKISKDPSKIPSWLKV--NKIYYPDFIVPDPKKAAVWEITG-AEFSKSEAHTADGISIRF 802
Query: 241 PRIDRVRYDKPWHDCLDVQSFVELVHSS 268
PR R+R DK W ++ EL S
Sbjct: 803 PRCTRIRDDKDWKSATNLPQLKELYQLS 830
>gi|14423667|sp|O67398.2|DNLI_AQUAE RecName: Full=Probable DNA ligase; AltName:
Full=Polydeoxyribonucleotide synthase [ATP]
Length = 584
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 102/215 (47%), Gaps = 32/215 (14%)
Query: 63 VAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRAGSD-LDV 119
+ NV+++E FF + IE EG+V K L S ++ G R W+K K +Y +D LD+
Sbjct: 378 IVDNVEDLENFFYQAIEEGCEGLVCKSLAPNSIYQAGKRGFLWIKYKRDYKSVLADTLDL 437
Query: 120 LIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 179
+++GG+YG G+R G L+A + P D F + +VGTG ++++ + L P
Sbjct: 438 VVVGGFYGKGQRKGTFGSLLMACYD-PESDM----FKTVTKVGTGFTEDDFKKLEEILMP 492
Query: 180 YFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPY--- 236
+ +P+ NS D+W E ++L IT T+ S V + +
Sbjct: 493 RKLNHRHPR----------VNSILEADMWFEP---YLVLEITGAELTL-SPVHTCGWGKV 538
Query: 237 ------SLRFPRI-DRVRYDKPWHDCLDVQSFVEL 264
LRFPR R R+DK D Q +E+
Sbjct: 539 SPNRGIGLRFPRFTGRYRFDKRPEDATTEQEIIEM 573
>gi|84000185|ref|NP_001033196.1| DNA ligase 3 [Bos taurus]
gi|83406113|gb|AAI11208.1| Ligase III, DNA, ATP-dependent [Bos taurus]
Length = 943
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 102/206 (49%), Gaps = 20/206 (9%)
Query: 67 VDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIG 123
VD + + +E +E G+VLKD+ +EPG R WLK+K +Y+ G+ D++++G
Sbjct: 645 VDMINRVIQEGLE----GLVLKDVKGTYEPGKRH--WLKVKKDYLNEGAMADTADLVVLG 698
Query: 124 GYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRK 183
+YG G +GG ++ FL+ D +++ + + G D L + T+L +
Sbjct: 699 AFYGQGSKGGMMSIFLMGCY-----DPSSQKWCTVTKCAGGHDDATLARLQTELD-MVKI 752
Query: 184 YEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA-PYSLRFPR 242
+ P + P ++ ++ N PD + P+K+ + IT +SE +A S+RFPR
Sbjct: 753 SKDPSKIP-NWLKI--NKIYYPDFIVPDPKKAAVWEITG-AEFSKSEAHTADGISIRFPR 808
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSS 268
R+R DK W + EL S
Sbjct: 809 CTRIRDDKDWKSATTLPQLKELYQLS 834
>gi|403332025|gb|EJY64998.1| DNA ligase 1 [Oxytricha trifallax]
Length = 851
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 103/214 (48%), Gaps = 25/214 (11%)
Query: 64 AHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEYIRA--GSDLDV 119
A ++ +E+F ++I++ EG+++K D + +EP RS WLKLK +YI G LD+
Sbjct: 638 AEAIEAIEEFLADSIKDSCEGLMIKTLDTNATYEPSKRSLNWLKLKKDYIDTGLGDSLDL 697
Query: 120 LIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 179
+++G +G G+R G FL+A D + ++ TGLSDE L + +LK
Sbjct: 698 VVVGADFGKGKRTGMYGSFLLACY-----DENLEVLQTVTKMATGLSDEMLAKIYEQLK- 751
Query: 180 YFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE-----KSIILSITSD-IRTIRSEVFS 233
+ PPS + ++ DVWI P+ K LSI+ +I S +
Sbjct: 752 -----DLEINKPPSNLKY---KEKNVDVWI-MPKYVWEIKCADLSISPVYCASIGSVEPN 802
Query: 234 APYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 267
+LRFPR R R DK D + +E S
Sbjct: 803 RGIALRFPRFIRERDDKQVEDATSSEQILEYYKS 836
>gi|74142599|dbj|BAE33868.1| unnamed protein product [Mus musculus]
gi|74217610|dbj|BAE33553.1| unnamed protein product [Mus musculus]
Length = 366
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 95/190 (50%), Gaps = 16/190 (8%)
Query: 83 EGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGGEVAQFL 139
EG+VLKD+ +EPG R WLK+K +Y+ G+ D++++G +YG G +GG ++ FL
Sbjct: 11 EGLVLKDVKGTYEPGKR--HWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGGMMSIFL 68
Query: 140 VALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTN 199
+ + PD+ +++ + + G D L + +L K PS+ ++
Sbjct: 69 MGCYD---PDS--QKWCTVTKCAGGHDDATLARLQKEL--VMVKISKDPSKIPSWLKI-- 119
Query: 200 NSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA-PYSLRFPRIDRVRYDKPWHDCLDV 258
N PD + P+K+ + IT RSE +A S+RFPR R+R DK W ++
Sbjct: 120 NKIYYPDFIVPDPKKAAVWEITG-AEFSRSEAHTADGISIRFPRCTRIRDDKDWKSATNL 178
Query: 259 QSFVELVHSS 268
EL S
Sbjct: 179 PQLKELYQLS 188
>gi|351702200|gb|EHB05119.1| DNA ligase 3 [Heterocephalus glaber]
Length = 1013
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 99/206 (48%), Gaps = 20/206 (9%)
Query: 69 EVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGY 125
++ + I EG+VLKD+ +EPG R WLK+K +Y+ G+ D++++G +
Sbjct: 642 DLADMINQVIREGLEGLVLKDVKGTYEPGKRH--WLKVKKDYLNEGAMADTADLVVLGAF 699
Query: 126 YGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYE 185
YG G +GG ++ FL+ D +++ + + G D A +T+L+ +
Sbjct: 700 YGQGSKGGMMSIFLMGCY-----DPGSQKWCTVTKCAGGHDD----ATLTRLQKELDMVK 750
Query: 186 YPKRAP--PSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA-PYSLRFPR 242
K PS+ ++ N PD + P+K+ + IT +SE +A S+RFPR
Sbjct: 751 ISKDPSKIPSWLKI--NKIYYPDFIVPDPKKAAVWEITG-AEFSKSEAHTADGISIRFPR 807
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSS 268
R+R DK W ++ EL S
Sbjct: 808 CTRIRDDKDWKSATNLPQLKELYQLS 833
>gi|338711026|ref|XP_001501551.3| PREDICTED: DNA ligase 3 [Equus caballus]
Length = 965
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 112/246 (45%), Gaps = 36/246 (14%)
Query: 29 MNDGICVCVHVYMLSQLRSQIMAADQTGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLK 88
++D + + M S+++ AAD D + + +E +E G+VLK
Sbjct: 628 LHDNMVEIPNRIMFSEMKRVTKAADL------------ADMINRVIREGLE----GLVLK 671
Query: 89 DLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGGEVAQFLVALAER 145
D+ +EPG R WLK+K +Y+ G+ D++++G +YG G +GG ++ FL+
Sbjct: 672 DVKGTYEPGKRH--WLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGGMMSIFLMG---- 725
Query: 146 PAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAP--PSFYQVTNNSKE 203
Y +C V T S DA + +L+ + K PS+ ++ N
Sbjct: 726 ----CYDPSSQKWCTV-TKCSGGHDDATLARLQKELDMVKISKDPSKIPSWLKI--NKIY 778
Query: 204 RPDVWIESPEKSIILSITSDIRTIRSEVFSA-PYSLRFPRIDRVRYDKPWHDCLDVQSFV 262
PD + P+K+ + IT +SE +A S+RFPR R+R DK W ++
Sbjct: 779 YPDFIVPDPKKAAVWEITG-AEFSKSEAHTADGISIRFPRCTRIREDKDWKSATNLPQLK 837
Query: 263 ELVHSS 268
EL S
Sbjct: 838 ELYQLS 843
>gi|374630682|ref|ZP_09703067.1| DNA ligase [Methanoplanus limicola DSM 2279]
gi|373908795|gb|EHQ36899.1| DNA ligase [Methanoplanus limicola DSM 2279]
Length = 549
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 96/208 (46%), Gaps = 32/208 (15%)
Query: 62 LVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVLI 121
+V+ ++ EVE+F+++ ++ EGI++K L + + PG R +W+K+KPE +D+ +
Sbjct: 368 IVSGDIAEVEEFYRDALDEGHEGIMVKSLSAAYTPGQRVREWIKIKPEV----DTIDLAV 423
Query: 122 IGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYF 181
IG +G G+R G FL+A + + YP +V TG+SDE L + LK
Sbjct: 424 IGAEWGEGKRAGLFGSFLLACRDE-NDELYP-----VSKVATGISDEMLALIYDSLK--- 474
Query: 182 RKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFP 241
E F + P++ E I S+ + + Y+LRFP
Sbjct: 475 ---ESVISESGKFVRF------EPEIVFEVGYAEIQKSVN----------YESGYALRFP 515
Query: 242 RIDRVRYDKPWHDCLDVQSFVELVHSSN 269
R RVR DK + + S E N
Sbjct: 516 RFIRVRDDKGIDEIETISSINERFTVQN 543
>gi|73747844|ref|NP_002302.2| DNA ligase 3 isoform beta precursor [Homo sapiens]
gi|119600603|gb|EAW80197.1| ligase III, DNA, ATP-dependent, isoform CRA_a [Homo sapiens]
gi|311346379|gb|ADP89975.1| DNA ligase 3 [Homo sapiens]
gi|311346382|gb|ADP89977.1| DNA ligase 3 [Homo sapiens]
gi|311346385|gb|ADP89979.1| DNA ligase 3 [Homo sapiens]
gi|311346388|gb|ADP89981.1| DNA ligase 3 [Homo sapiens]
gi|311346391|gb|ADP89983.1| DNA ligase 3 [Homo sapiens]
gi|311346394|gb|ADP89985.1| DNA ligase 3 [Homo sapiens]
gi|311346397|gb|ADP89987.1| DNA ligase 3 [Homo sapiens]
gi|311346400|gb|ADP89989.1| DNA ligase 3 [Homo sapiens]
gi|311346403|gb|ADP89991.1| DNA ligase 3 [Homo sapiens]
gi|311346406|gb|ADP89993.1| DNA ligase 3 [Homo sapiens]
gi|311346409|gb|ADP89995.1| DNA ligase 3 [Homo sapiens]
gi|311346412|gb|ADP89997.1| DNA ligase 3 [Homo sapiens]
gi|311346415|gb|ADP89999.1| DNA ligase 3 [Homo sapiens]
gi|311346418|gb|ADP90001.1| DNA ligase 3 [Homo sapiens]
gi|311346421|gb|ADP90003.1| DNA ligase 3 [Homo sapiens]
gi|311346424|gb|ADP90005.1| DNA ligase 3 [Homo sapiens]
gi|311346427|gb|ADP90007.1| DNA ligase 3 [Homo sapiens]
gi|311346430|gb|ADP90009.1| DNA ligase 3 [Homo sapiens]
gi|311346433|gb|ADP90011.1| DNA ligase 3 [Homo sapiens]
gi|311346436|gb|ADP90013.1| DNA ligase 3 [Homo sapiens]
gi|311346439|gb|ADP90015.1| DNA ligase 3 [Homo sapiens]
gi|311346442|gb|ADP90017.1| DNA ligase 3 [Homo sapiens]
gi|311346445|gb|ADP90019.1| DNA ligase 3 [Homo sapiens]
gi|311346448|gb|ADP90021.1| DNA ligase 3 [Homo sapiens]
gi|311346451|gb|ADP90023.1| DNA ligase 3 [Homo sapiens]
gi|311346454|gb|ADP90025.1| DNA ligase 3 [Homo sapiens]
gi|311346457|gb|ADP90027.1| DNA ligase 3 [Homo sapiens]
gi|311346460|gb|ADP90029.1| DNA ligase 3 [Homo sapiens]
gi|311346463|gb|ADP90031.1| DNA ligase 3 [Homo sapiens]
gi|311346466|gb|ADP90033.1| DNA ligase 3 [Homo sapiens]
gi|311346469|gb|ADP90035.1| DNA ligase 3 [Homo sapiens]
gi|311346472|gb|ADP90037.1| DNA ligase 3 [Homo sapiens]
gi|311346475|gb|ADP90039.1| DNA ligase 3 [Homo sapiens]
gi|311346478|gb|ADP90041.1| DNA ligase 3 [Homo sapiens]
gi|311346481|gb|ADP90043.1| DNA ligase 3 [Homo sapiens]
gi|311346484|gb|ADP90045.1| DNA ligase 3 [Homo sapiens]
gi|311346487|gb|ADP90047.1| DNA ligase 3 [Homo sapiens]
gi|311346490|gb|ADP90049.1| DNA ligase 3 [Homo sapiens]
gi|311346493|gb|ADP90051.1| DNA ligase 3 [Homo sapiens]
gi|311346496|gb|ADP90053.1| DNA ligase 3 [Homo sapiens]
Length = 949
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 97/196 (49%), Gaps = 16/196 (8%)
Query: 77 TIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGG 133
I+ EG+VLKD+ +EPG R WLK+K +Y+ G+ D++++G +YG G +GG
Sbjct: 649 VIQEGLEGLVLKDVKGTYEPGKRH--WLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGG 706
Query: 134 EVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPS 193
++ FL+ D +++ + + G D L + +L + + P + P S
Sbjct: 707 MMSIFLMGCY-----DPGSQKWCTVTKCAGGHDDATLARLQNELD-MVKISKDPSKIP-S 759
Query: 194 FYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA-PYSLRFPRIDRVRYDKPW 252
+ +V N PD + P+K+ + IT +SE +A S+RFPR R+R DK W
Sbjct: 760 WLKV--NKIYYPDFIVPDPKKAAVWEITG-AEFSKSEAHTADGISIRFPRCTRIRDDKDW 816
Query: 253 HDCLDVQSFVELVHSS 268
++ EL S
Sbjct: 817 KSATNLPQLKELYQLS 832
>gi|336476629|ref|YP_004615770.1| ATP-dependent DNA ligase I [Methanosalsum zhilinae DSM 4017]
gi|335930010|gb|AEH60551.1| DNA ligase I, ATP-dependent Dnl1 [Methanosalsum zhilinae DSM 4017]
Length = 569
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 105/218 (48%), Gaps = 37/218 (16%)
Query: 63 VAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRAGSD-LDV 119
V+ + +E+ FF I+ EGI++K + S ++PG R W+K K EY D D+
Sbjct: 374 VSADFNEIRSFFDRCIDKGLEGIIIKSVADNSFYQPGKRGWLWVKWKKEYAEDVRDTFDL 433
Query: 120 LIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 179
+I+G Y G G+R G L A+ + ++ +F RVGTG +D++L+ + L
Sbjct: 434 IIVGFYSGKGKRQGLFGSLLCAVLNKE-----KNQYETFTRVGTGFTDQDLEEISELLNK 488
Query: 180 YFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP---- 235
+ K+ PP+ + + PD +I+ S+++ + + S+V +P
Sbjct: 489 -----KKIKKKPPN---LVVEKEMVPDSYIDP---SVVIEV------LGSQVTESPHHTA 531
Query: 236 --------YSLRFPRIDRVRYDKPWHDCLDVQSFVELV 265
Y+LRFPR R+RYDK D ++ L+
Sbjct: 532 GKNKSDKGYALRFPRFLRMRYDKGPLDVTTIEEVRNLL 569
>gi|57525295|ref|NP_001006215.1| DNA ligase 3 [Gallus gallus]
gi|53128173|emb|CAG31277.1| hypothetical protein RCJMB04_4j11 [Gallus gallus]
Length = 902
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 92/190 (48%), Gaps = 16/190 (8%)
Query: 83 EGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGGEVAQFL 139
EG+VLKD+ +EPG R WLK+K +Y+ G+ D++++G +YG G +GG ++ FL
Sbjct: 566 EGLVLKDIKGNYEPGKRH--WLKVKKDYLNEGAMADTADLVVLGAFYGKGSKGGMMSIFL 623
Query: 140 VALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTN 199
+ D ++ + + G D L + T+L K PS+ ++
Sbjct: 624 MGCY-----DPTSEKWCTVTKCAGGHDDATLARLQTELD--MVKISKDPSKIPSWLKI-- 674
Query: 200 NSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA-PYSLRFPRIDRVRYDKPWHDCLDV 258
N PD + P+K+ + IT ++E +A S+RFPR R+R DK W ++
Sbjct: 675 NKIYYPDFIVPDPKKAPVWEITG-AEFSKAEAHTADGISIRFPRCTRIRDDKDWKTATNL 733
Query: 259 QSFVELVHSS 268
EL S
Sbjct: 734 PQLKELYQLS 743
>gi|348567741|ref|XP_003469657.1| PREDICTED: DNA ligase 3-like isoform 2 [Cavia porcellus]
Length = 939
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 101/206 (49%), Gaps = 20/206 (9%)
Query: 67 VDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIG 123
D + + +E +E G+VLKD+ +EPG R WLK+K +Y+ G+ D++++G
Sbjct: 642 ADMINRVIREGLE----GLVLKDVKGTYEPGKRH--WLKVKKDYLNEGAMADTADLVVLG 695
Query: 124 GYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRK 183
+YG G +GG ++ FL+ D +++ + + G D L A + K +
Sbjct: 696 AFYGQGSKGGMMSIFLMGCY-----DPSSQKWCTVTKCAGGHDDATL-ARLQKELDMVKI 749
Query: 184 YEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA-PYSLRFPR 242
+ P + P S+ ++ N PD + P+K+ + IT +SE +A S+RFPR
Sbjct: 750 SKDPSKIP-SWLKI--NKIYYPDFIVPDPKKAAVWEITG-AEFSKSEAHTADGISIRFPR 805
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSS 268
R+R DK W ++ EL S
Sbjct: 806 CTRIRDDKDWKSATNLPQLKELYQLS 831
>gi|345805757|ref|XP_548265.3| PREDICTED: DNA ligase 3 [Canis lupus familiaris]
Length = 1001
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 102/208 (49%), Gaps = 24/208 (11%)
Query: 67 VDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS--DL-DVLIIG 123
VD + + +E +E G+VLKD+ +EPG R WLK+K +Y+ G+ D+ D++++G
Sbjct: 644 VDMINRVIREGLE----GLVLKDVKGTYEPGKRH--WLKVKKDYLNEGAMADMADLVVLG 697
Query: 124 GYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRK 183
+YG G +GG ++ FL+ Y +C V T S DA + +L+
Sbjct: 698 AFYGQGSKGGMMSIFLMG--------CYDPSSQKWCTV-TKCSGGHDDATLARLQKELDM 748
Query: 184 YEYPKRAP--PSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA-PYSLRF 240
+ K P++ ++ N PD + P+K+ + IT RSE +A S+RF
Sbjct: 749 VKISKDPSKIPNWLKI--NKIYYPDFIVPDPKKAAVWEITG-AEFSRSEAHTADGISIRF 805
Query: 241 PRIDRVRYDKPWHDCLDVQSFVELVHSS 268
PR R+R DK W ++ EL S
Sbjct: 806 PRCTRIRDDKDWKSATNLPQLKELYQLS 833
>gi|73747829|ref|NP_039269.2| DNA ligase 3 isoform alpha precursor [Homo sapiens]
gi|251757259|sp|P49916.2|DNLI3_HUMAN RecName: Full=DNA ligase 3; AltName: Full=DNA ligase III; AltName:
Full=Polydeoxyribonucleotide synthase [ATP] 3
gi|45751619|gb|AAH68005.1| Ligase III, DNA, ATP-dependent [Homo sapiens]
gi|119600605|gb|EAW80199.1| ligase III, DNA, ATP-dependent, isoform CRA_c [Homo sapiens]
gi|311346378|gb|ADP89974.1| DNA ligase 3 [Homo sapiens]
gi|311346381|gb|ADP89976.1| DNA ligase 3 [Homo sapiens]
gi|311346384|gb|ADP89978.1| DNA ligase 3 [Homo sapiens]
gi|311346387|gb|ADP89980.1| DNA ligase 3 [Homo sapiens]
gi|311346390|gb|ADP89982.1| DNA ligase 3 [Homo sapiens]
gi|311346393|gb|ADP89984.1| DNA ligase 3 [Homo sapiens]
gi|311346396|gb|ADP89986.1| DNA ligase 3 [Homo sapiens]
gi|311346399|gb|ADP89988.1| DNA ligase 3 [Homo sapiens]
gi|311346402|gb|ADP89990.1| DNA ligase 3 [Homo sapiens]
gi|311346405|gb|ADP89992.1| DNA ligase 3 [Homo sapiens]
gi|311346408|gb|ADP89994.1| DNA ligase 3 [Homo sapiens]
gi|311346411|gb|ADP89996.1| DNA ligase 3 [Homo sapiens]
gi|311346414|gb|ADP89998.1| DNA ligase 3 [Homo sapiens]
gi|311346417|gb|ADP90000.1| DNA ligase 3 [Homo sapiens]
gi|311346420|gb|ADP90002.1| DNA ligase 3 [Homo sapiens]
gi|311346423|gb|ADP90004.1| DNA ligase 3 [Homo sapiens]
gi|311346426|gb|ADP90006.1| DNA ligase 3 [Homo sapiens]
gi|311346429|gb|ADP90008.1| DNA ligase 3 [Homo sapiens]
gi|311346432|gb|ADP90010.1| DNA ligase 3 [Homo sapiens]
gi|311346435|gb|ADP90012.1| DNA ligase 3 [Homo sapiens]
gi|311346438|gb|ADP90014.1| DNA ligase 3 [Homo sapiens]
gi|311346441|gb|ADP90016.1| DNA ligase 3 [Homo sapiens]
gi|311346444|gb|ADP90018.1| DNA ligase 3 [Homo sapiens]
gi|311346447|gb|ADP90020.1| DNA ligase 3 [Homo sapiens]
gi|311346450|gb|ADP90022.1| DNA ligase 3 [Homo sapiens]
gi|311346453|gb|ADP90024.1| DNA ligase 3 [Homo sapiens]
gi|311346456|gb|ADP90026.1| DNA ligase 3 [Homo sapiens]
gi|311346459|gb|ADP90028.1| DNA ligase 3 [Homo sapiens]
gi|311346462|gb|ADP90030.1| DNA ligase 3 [Homo sapiens]
gi|311346465|gb|ADP90032.1| DNA ligase 3 [Homo sapiens]
gi|311346468|gb|ADP90034.1| DNA ligase 3 [Homo sapiens]
gi|311346471|gb|ADP90036.1| DNA ligase 3 [Homo sapiens]
gi|311346474|gb|ADP90038.1| DNA ligase 3 [Homo sapiens]
gi|311346477|gb|ADP90040.1| DNA ligase 3 [Homo sapiens]
gi|311346480|gb|ADP90042.1| DNA ligase 3 [Homo sapiens]
gi|311346483|gb|ADP90044.1| DNA ligase 3 [Homo sapiens]
gi|311346486|gb|ADP90046.1| DNA ligase 3 [Homo sapiens]
gi|311346489|gb|ADP90048.1| DNA ligase 3 [Homo sapiens]
gi|311346492|gb|ADP90050.1| DNA ligase 3 [Homo sapiens]
gi|311346495|gb|ADP90052.1| DNA ligase 3 [Homo sapiens]
Length = 1009
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 94/196 (47%), Gaps = 16/196 (8%)
Query: 77 TIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGG 133
I+ EG+VLKD+ +EPG R WLK+K +Y+ G+ D++++G +YG G +GG
Sbjct: 649 VIQEGLEGLVLKDVKGTYEPGKRH--WLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGG 706
Query: 134 EVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPS 193
++ FL+ D +++ + + G D L + +L K PS
Sbjct: 707 MMSIFLMGCY-----DPGSQKWCTVTKCAGGHDDATLARLQNELD--MVKISKDPSKIPS 759
Query: 194 FYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA-PYSLRFPRIDRVRYDKPW 252
+ +V N PD + P+K+ + IT +SE +A S+RFPR R+R DK W
Sbjct: 760 WLKV--NKIYYPDFIVPDPKKAAVWEITG-AEFSKSEAHTADGISIRFPRCTRIRDDKDW 816
Query: 253 HDCLDVQSFVELVHSS 268
++ EL S
Sbjct: 817 KSATNLPQLKELYQLS 832
>gi|410259056|gb|JAA17494.1| ligase III, DNA, ATP-dependent [Pan troglodytes]
Length = 949
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 97/196 (49%), Gaps = 16/196 (8%)
Query: 77 TIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGG 133
I+ EG+VLKD+ +EPG R WLK+K +Y+ G+ D++++G +YG G +GG
Sbjct: 649 VIQEGLEGLVLKDVKGTYEPGKRH--WLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGG 706
Query: 134 EVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPS 193
++ FL+ D +++ + + G D L A + K + + P + P S
Sbjct: 707 MMSIFLMGCY-----DPGSQKWCTVTKCAGGHDDATL-ARLQKELDMVKISKDPSKIP-S 759
Query: 194 FYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA-PYSLRFPRIDRVRYDKPW 252
+ +V N PD + P+K+ + IT +SE +A S+RFPR R+R DK W
Sbjct: 760 WLKV--NKIYYPDFIVPDPKKAAVWEITG-AEFSKSEAHTADGISIRFPRCTRIRDDKDW 816
Query: 253 HDCLDVQSFVELVHSS 268
++ EL S
Sbjct: 817 KSATNLPQLKELYQLS 832
>gi|332848016|ref|XP_003315567.1| PREDICTED: DNA ligase 3 isoform 1 [Pan troglodytes]
Length = 949
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 97/196 (49%), Gaps = 16/196 (8%)
Query: 77 TIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGG 133
I+ EG+VLKD+ +EPG R WLK+K +Y+ G+ D++++G +YG G +GG
Sbjct: 649 VIQEGLEGLVLKDVKGTYEPGKRH--WLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGG 706
Query: 134 EVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPS 193
++ FL+ D +++ + + G D L A + K + + P + P S
Sbjct: 707 MMSIFLMGCY-----DPGSQKWCTVTKCAGGHDDATL-ARLQKELDMVKISKDPSKIP-S 759
Query: 194 FYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA-PYSLRFPRIDRVRYDKPW 252
+ +V N PD + P+K+ + IT +SE +A S+RFPR R+R DK W
Sbjct: 760 WLKV--NKIYYPDFIVPDPKKAAVWEITG-AEFSKSEAHTADGISIRFPRCTRIRDDKDW 816
Query: 253 HDCLDVQSFVELVHSS 268
++ EL S
Sbjct: 817 KSATNLPQLKELYQLS 832
>gi|440902828|gb|ELR53569.1| DNA ligase 3 [Bos grunniens mutus]
Length = 1002
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 102/206 (49%), Gaps = 20/206 (9%)
Query: 67 VDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIG 123
VD + + +E +E G+VLKD+ +EPG R WLK+K +Y+ G+ D++++G
Sbjct: 645 VDMINRVIQEGLE----GLVLKDVKGTYEPGKRH--WLKVKKDYLNEGAMADTADLVVLG 698
Query: 124 GYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRK 183
+YG G +GG ++ FL+ D +++ + + G D L + T+L +
Sbjct: 699 AFYGQGSKGGMMSIFLMGCY-----DPSSQKWCTVTKCAGGHDDATLARLQTELD-MVKI 752
Query: 184 YEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA-PYSLRFPR 242
+ P + P ++ ++ N PD + P+K+ + IT +SE +A S+RFPR
Sbjct: 753 SKDPSKIP-NWLKI--NKIYYPDFIVPDPKKAAVWEITG-AEFSKSEAHTADGISIRFPR 808
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSS 268
R+R DK W + EL S
Sbjct: 809 CTRIRDDKDWKSATTLPQLKELYQLS 834
>gi|348567743|ref|XP_003469658.1| PREDICTED: DNA ligase 3-like isoform 3 [Cavia porcellus]
Length = 951
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 101/206 (49%), Gaps = 20/206 (9%)
Query: 67 VDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIG 123
D + + +E +E G+VLKD+ +EPG R WLK+K +Y+ G+ D++++G
Sbjct: 642 ADMINRVIREGLE----GLVLKDVKGTYEPGKRH--WLKVKKDYLNEGAMADTADLVVLG 695
Query: 124 GYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRK 183
+YG G +GG ++ FL+ D +++ + + G D L + +L +
Sbjct: 696 AFYGQGSKGGMMSIFLMGCY-----DPSSQKWCTVTKCAGGHDDATLARLQKELD-MVKI 749
Query: 184 YEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA-PYSLRFPR 242
+ P + P S+ ++ N PD + P+K+ + IT +SE +A S+RFPR
Sbjct: 750 SKDPSKIP-SWLKI--NKIYYPDFIVPDPKKAAVWEITG-AEFSKSEAHTADGISIRFPR 805
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSS 268
R+R DK W ++ EL S
Sbjct: 806 CTRIRDDKDWKSATNLPQLKELYQLS 831
>gi|224079383|ref|XP_002305845.1| predicted protein [Populus trichocarpa]
gi|222848809|gb|EEE86356.1| predicted protein [Populus trichocarpa]
Length = 227
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 106/216 (49%), Gaps = 28/216 (12%)
Query: 66 NVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLII 122
+ +++ F ++ + + EGI++K D+ + + P R+ WLK+K +Y+ +D LD++ I
Sbjct: 15 TLTKMKSFLEDALRSSCEGIMVKSLDIDAGYCPSKRTDAWLKVKKDYVEGLNDSLDLVPI 74
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL--KPY 180
G ++G+GR+ G + FL+A P+T F S CRV +G SD V+T+L K +
Sbjct: 75 GAWHGNGRKAGWYSPFLMACYN---PET--EEFQSVCRVMSGFSDAFYIEVITELQMKEF 129
Query: 181 FRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP----- 235
F + PP + V E PD+W SPE ++ I TI S V A
Sbjct: 130 FSGDRILAKKPPYYRTV-----EAPDMWF-SPE--VVWEIRGADFTI-SPVHQAAVGLVH 180
Query: 236 ----YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 267
S+RFPR D+ +C E+ +S
Sbjct: 181 QSRGISIRFPRFIHSISDRNPEECSTAADIAEMFNS 216
>gi|410980490|ref|XP_003996610.1| PREDICTED: DNA ligase 3 isoform 1 [Felis catus]
Length = 996
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 100/208 (48%), Gaps = 24/208 (11%)
Query: 67 VDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIG 123
D + + +E +E G+VLKD+ +EPG R WLK+K +Y+ G+ D++++G
Sbjct: 644 ADMINRVIREGLE----GLVLKDVKGTYEPGKRH--WLKVKKDYLNEGAMADTADLVVLG 697
Query: 124 GYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRK 183
+YG G +GG ++ FL+ + P + C V T S DA + +L+
Sbjct: 698 AFYGQGSKGGMMSIFLMGCYD-PGSQKW-------CTV-TKCSGGHDDATLARLQKELDM 748
Query: 184 YEYPKRAP--PSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA-PYSLRF 240
+ K PS+ ++ N PD + P+K+ + IT +SE +A S+RF
Sbjct: 749 VKISKDPSKIPSWLKI--NKIYYPDFIVPDPKKAAVWEITG-AEFSKSEAHTADGISIRF 805
Query: 241 PRIDRVRYDKPWHDCLDVQSFVELVHSS 268
PR R+R DK W D+ EL S
Sbjct: 806 PRCTRIRDDKDWKSATDLPKLKELYQLS 833
>gi|426348731|ref|XP_004041981.1| PREDICTED: DNA ligase 3 isoform 2 [Gorilla gorilla gorilla]
Length = 949
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 97/196 (49%), Gaps = 16/196 (8%)
Query: 77 TIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGG 133
I+ EG+VLKD+ +EPG R WLK+K +Y+ G+ D++++G +YG G +GG
Sbjct: 649 VIQEGLEGLVLKDVKGTYEPGKRH--WLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGG 706
Query: 134 EVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPS 193
++ FL+ D +++ + + G D L A + K + + P + P S
Sbjct: 707 MMSIFLMGCY-----DPGSQKWCTVTKCAGGHDDATL-ARLQKELDMVKISKDPSKIP-S 759
Query: 194 FYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA-PYSLRFPRIDRVRYDKPW 252
+ +V N PD + P+K+ + IT +SE +A S+RFPR R+R DK W
Sbjct: 760 WLKV--NKIYYPDFIVPDPKKAAVWEITG-AEFSKSEAHTADGISIRFPRCTRIRDDKDW 816
Query: 253 HDCLDVQSFVELVHSS 268
++ EL S
Sbjct: 817 KSATNLPQLKELYQLS 832
>gi|355753913|gb|EHH57878.1| DNA ligase 3 [Macaca fascicularis]
Length = 1009
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 101/208 (48%), Gaps = 20/208 (9%)
Query: 67 VDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIG 123
D + + +E +E G+VLKD+ +EPG R WLK+K +Y+ G+ D++++G
Sbjct: 643 ADMITRVIREGLE----GLVLKDVKGTYEPGKR--HWLKVKKDYLNEGAMADTADLVVLG 696
Query: 124 GYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRK 183
+YG G +GG ++ FL+ D +++ + + G D L + +L +
Sbjct: 697 AFYGQGSKGGMMSIFLMGCY-----DPGSQKWCTVTKCAGGHDDATLARLQNELD-MVKI 750
Query: 184 YEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA-PYSLRFPR 242
+ P + P S+ +V N PD + P+K+ + IT +SE +A S+RFPR
Sbjct: 751 SKDPSKIP-SWLKV--NKIYYPDFIVPDPKKAAVWEITG-AEFSKSEAHTADGISIRFPR 806
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSSNG 270
R+R DK W ++ EL S
Sbjct: 807 CTRIRDDKDWKSATNLPQLKELYQLSKA 834
>gi|218883590|ref|YP_002427972.1| ATP-dependent DNA ligase [Desulfurococcus kamchatkensis 1221n]
gi|218765206|gb|ACL10605.1| ATP-dependent DNA ligase [Desulfurococcus kamchatkensis 1221n]
Length = 610
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 104/207 (50%), Gaps = 23/207 (11%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLII 122
+V E+EKFF + I + EG+++K L GS ++ G R W+K K +Y D +D++++
Sbjct: 401 DVKELEKFFLKAISDGAEGVMVKALHDGSIYQAGTRGWLWIKFKRDYRSEMIDTVDLVVV 460
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
G +YG GRRGG+ L+A A + F + C+VG+G DE+LD + LKPY R
Sbjct: 461 GAFYGKGRRGGKYGALLMA-----AYNDEKDVFETVCKVGSGFKDEDLDKLPEILKPYIR 515
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFS-----APYS 237
+ P+ ++ PDVW+E + I+ + I + + A S
Sbjct: 516 DRKSPRVV----------AEMEPDVWVEPALVAEIIGAELTLSPIHTCAYGRIKSDAGLS 565
Query: 238 LRFPRIDRVRYDKPWHDCLDVQSFVEL 264
+RFPR R R DK D VE+
Sbjct: 566 IRFPRFIRWRPDKRPEDATTSNELVEM 592
>gi|410054237|ref|XP_001170212.3| PREDICTED: DNA ligase 1 isoform 4 [Pan troglodytes]
Length = 936
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 75/133 (56%), Gaps = 16/133 (12%)
Query: 61 SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEYIRA-GSDL 117
SL +V+++ +F ++++++ EG+++K D+ + +E RS WLKLK +Y+ G L
Sbjct: 698 SLDTKDVEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDGVGDTL 757
Query: 118 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELD------ 171
D+++IG Y G G+R G FL+A + D + C++GTG SDEELD
Sbjct: 758 DLVVIGAYLGRGKRAGRYGGFLLA-----SYDEDSEELQAICKLGTGFSDEELDEHHQSL 812
Query: 172 --AVVTKLKPYFR 182
V+ +PY R
Sbjct: 813 KALVLPSPRPYVR 825
>gi|1151000|gb|AAC49484.1| hypothetical protein UNE452 [Saccharomyces cerevisiae]
Length = 452
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 130/305 (42%), Gaps = 56/305 (18%)
Query: 153 RRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESP 212
++ +SFC + G+S EE + K + ++++ + APP+ + + P WI+ P
Sbjct: 40 KKILSFCSIANGISQEEFKEIDRKTRGHWKRTS--EVAPPA--SILEFGSKIPAEWID-P 94
Query: 213 EKSIILSITS---DIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVE-LVHSS 268
+SI+L I S D + ++ +L R+RYDK W DC + E S
Sbjct: 95 SESIVLEIKSRSLDNTETNMQKYATNCTLYGGYCKRIRYDKEWTDCYTLNDLYESRTVKS 154
Query: 269 NGTTQKGKEYGGLQDDKPKQ--FRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMV 326
N + Q + GL K K+ S +K + I ++IF+ ++
Sbjct: 155 NPSYQAERSQLGLIRKKRKRVLISDSFHQNRKQLPI----------------SNIFAGLL 198
Query: 327 FYFV------NVPPAYSLDSLHKMVVENGGTFSMNL--------------NNSVTHCVAA 366
FY + + + L K +VE+GG N+ + T C A
Sbjct: 199 FYVLSDYVTEDTGIRITRAELEKTIVEHGGKLIYNVILKRHSIGDVRLISCKTTTECKAL 258
Query: 367 DNKGLKYEAAKRRGDVIHYSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEVDEFSDL 426
++G D++H +WVLDC + K+L+ ++P Y ++S + ++ VD D
Sbjct: 259 IDRGY---------DILHPNWVLDCIAYKRLILIEPNYCFNVSQKMRAVAEKRVDCLGDS 309
Query: 427 YFWDL 431
+ D+
Sbjct: 310 FENDI 314
>gi|410980492|ref|XP_003996611.1| PREDICTED: DNA ligase 3 isoform 2 [Felis catus]
Length = 1015
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 99/208 (47%), Gaps = 24/208 (11%)
Query: 67 VDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIG 123
D + + +E +E G+VLKD+ +EPG R WLK+K +Y+ G+ D++++G
Sbjct: 644 ADMINRVIREGLE----GLVLKDVKGTYEPGKRH--WLKVKKDYLNEGAMADTADLVVLG 697
Query: 124 GYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRK 183
+YG G +GG ++ FL+ Y +C V T S DA + +L+
Sbjct: 698 AFYGQGSKGGMMSIFLMG--------CYDPGSQKWCTV-TKCSGGHDDATLARLQKELDM 748
Query: 184 YEYPKRAP--PSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA-PYSLRF 240
+ K PS+ ++ N PD + P+K+ + IT +SE +A S+RF
Sbjct: 749 VKISKDPSKIPSWLKI--NKIYYPDFIVPDPKKAAVWEITG-AEFSKSEAHTADGISIRF 805
Query: 241 PRIDRVRYDKPWHDCLDVQSFVELVHSS 268
PR R+R DK W D+ EL S
Sbjct: 806 PRCTRIRDDKDWKSATDLPKLKELYQLS 833
>gi|284161662|ref|YP_003400285.1| ATP-dependent DNA ligase I [Archaeoglobus profundus DSM 5631]
gi|284011659|gb|ADB57612.1| DNA ligase I, ATP-dependent Dnl1 [Archaeoglobus profundus DSM 5631]
Length = 555
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 106/240 (44%), Gaps = 35/240 (14%)
Query: 27 VAMNDGICVCVHVYMLSQLRSQIMAADQTGEPCWSLVAHNVDEVEKFFKETIENRDEGIV 86
+ NDG + + + ++ ++ + + +V + +E+E+ FKE ++ EG +
Sbjct: 339 ILYNDGEVIDLPLKERRKILESVIKESKIIKIAKQVVTNKKEEIERVFKEALDAGHEGAM 398
Query: 87 LKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERP 146
LK+ S + PG R WLKLK LD++++GG +G GRR ++ F E
Sbjct: 399 LKNPNSPYTPGKRGRHWLKLK----EVMETLDLVVVGGEWGEGRRSHLISSF-----ELA 449
Query: 147 APDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKR--APPSFYQVTNNSKER 204
D + + +VGTG +DE+L+ + KP K E K P ++V ++
Sbjct: 450 CLDPRTGKLLRIGQVGTGFTDEDLEELTELFKPLIVKEEGKKVYFKPKIVFEVAYQEIQK 509
Query: 205 PDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
SP+ + + ++LRFPR R+R DK D + EL
Sbjct: 510 ------SPK------------------YESGFALRFPRFVRLRDDKGVEDADTIDRVREL 545
>gi|221043184|dbj|BAH13269.1| unnamed protein product [Homo sapiens]
Length = 738
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 96/204 (47%), Gaps = 16/204 (7%)
Query: 69 EVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGY 125
++ I+ EG+VLKD+ +EPG R WLK+K +Y+ G+ D++++G +
Sbjct: 370 DLADMITRVIQEGLEGLVLKDVKGTYEPGKR--HWLKVKKDYLNEGAMADTADLVVLGAF 427
Query: 126 YGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYE 185
YG G +GG ++ FL+ D +++ + + G D L + +L K
Sbjct: 428 YGQGSKGGMMSIFLMGCY-----DPGSQKWCTVTKCAGGHDDATLARLQNELD--MVKIS 480
Query: 186 YPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA-PYSLRFPRID 244
PS+ +V N PD + P+K+ + IT +SE +A S+RFPR
Sbjct: 481 KDPSKIPSWLKV--NKIYYPDFIVPDPKKAAVWEITG-AEFSKSEAHTADGISIRFPRCT 537
Query: 245 RVRYDKPWHDCLDVQSFVELVHSS 268
R+R DK W ++ EL S
Sbjct: 538 RIRDDKDWKSATNLPQLKELYQLS 561
>gi|300508449|pdb|3L2P|A Chain A, Human Dna Ligase Iii Recognizes Dna Ends By Dynamic
Switching Between Two Dna Bound States
Length = 579
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 94/196 (47%), Gaps = 16/196 (8%)
Query: 77 TIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGG 133
I+ EG+VLKD+ +EPG R WLK+K +Y+ G+ D++++G +YG G +GG
Sbjct: 395 VIQEGLEGLVLKDVKGTYEPGKRH--WLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGG 452
Query: 134 EVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPS 193
++ FL+ D +++ + + G D L + +L K PS
Sbjct: 453 MMSIFLMGCY-----DPGSQKWCTVTKCAGGHDDATLARLQNELD--MVKISKDPSKIPS 505
Query: 194 FYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA-PYSLRFPRIDRVRYDKPW 252
+ +V N PD + P+K+ + IT +SE +A S+RFPR R+R DK W
Sbjct: 506 WLKV--NKIYYPDFIVPDPKKAAVWEITG-AEFSKSEAHTADGISIRFPRCTRIRDDKDW 562
Query: 253 HDCLDVQSFVELVHSS 268
++ EL S
Sbjct: 563 KSATNLPQLKELYQLS 578
>gi|410980494|ref|XP_003996612.1| PREDICTED: DNA ligase 3 isoform 3 [Felis catus]
Length = 1022
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 99/208 (47%), Gaps = 24/208 (11%)
Query: 67 VDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIG 123
D + + +E +E G+VLKD+ +EPG R WLK+K +Y+ G+ D++++G
Sbjct: 651 ADMINRVIREGLE----GLVLKDVKGTYEPGKR--HWLKVKKDYLNEGAMADTADLVVLG 704
Query: 124 GYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRK 183
+YG G +GG ++ FL+ Y +C V T S DA + +L+
Sbjct: 705 AFYGQGSKGGMMSIFLMG--------CYDPGSQKWCTV-TKCSGGHDDATLARLQKELDM 755
Query: 184 YEYPKRAP--PSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA-PYSLRF 240
+ K PS+ ++ N PD + P+K+ + IT +SE +A S+RF
Sbjct: 756 VKISKDPSKIPSWLKI--NKIYYPDFIVPDPKKAAVWEITG-AEFSKSEAHTADGISIRF 812
Query: 241 PRIDRVRYDKPWHDCLDVQSFVELVHSS 268
PR R+R DK W D+ EL S
Sbjct: 813 PRCTRIRDDKDWKSATDLPKLKELYQLS 840
>gi|296202009|ref|XP_002748408.1| PREDICTED: DNA ligase 3 isoform 2 [Callithrix jacchus]
Length = 954
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 101/206 (49%), Gaps = 20/206 (9%)
Query: 67 VDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIG 123
D + + +E +E G+VLKD+ +EPG R WLK+K +Y+ G+ D++++G
Sbjct: 643 ADMITRVIREGLE----GLVLKDVKGTYEPGKRH--WLKVKKDYLNEGAMADTADLVVLG 696
Query: 124 GYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRK 183
+YG G +GG ++ FL+ D +++ + + G D L A + K +
Sbjct: 697 AFYGQGSKGGMMSIFLMGCY-----DPGSQKWCTVTKCAGGHDDATL-ARLQKELDMVKI 750
Query: 184 YEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA-PYSLRFPR 242
+ P + P S+ +V N PD + P+K+ + IT +SE +A S+RFPR
Sbjct: 751 SKDPSKIP-SWLKV--NKIYYPDFIVPDPKKAAVWEITG-AEFSKSEAHTADGISIRFPR 806
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSS 268
R+R DK W ++ EL S
Sbjct: 807 CTRIRDDKDWKSATNLPQLKELYQLS 832
>gi|402899337|ref|XP_003912656.1| PREDICTED: DNA ligase 3 [Papio anubis]
Length = 1009
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 101/206 (49%), Gaps = 20/206 (9%)
Query: 67 VDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIG 123
D + + +E +E G+VLKD+ +EPG R WLK+K +Y+ G+ D++++G
Sbjct: 643 ADMITRVIREGLE----GLVLKDVKGTYEPGKR--HWLKVKKDYLNEGAMADTADLVVLG 696
Query: 124 GYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRK 183
+YG G +GG ++ FL+ D +++ + + G D L + +L +
Sbjct: 697 AFYGQGSKGGMMSIFLMGCY-----DPGSQKWCTVTKCAGGHDDATLARLQNELD-MVKI 750
Query: 184 YEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA-PYSLRFPR 242
+ P + P S+ +V N PD + P+K+ + IT +SE +A S+RFPR
Sbjct: 751 SKDPSKIP-SWLKV--NKIYYPDFIVPDPKKAAVWEITG-AEFSKSEAHTADGISIRFPR 806
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSS 268
R+R DK W ++ EL S
Sbjct: 807 CTRIRDDKDWKSATNLPQLKELYQLS 832
>gi|219121358|ref|XP_002185904.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209582753|gb|ACI65374.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 651
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 94/190 (49%), Gaps = 22/190 (11%)
Query: 70 VEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYY 126
+E+F ++ + EG+++K L + +EP RS WLKLK +Y+ G +D++ +G Y+
Sbjct: 442 LEEFLDSAVKGQCEGLMVKTLEVNAIYEPSRRSLNWLKLKKDYLDGLGDSVDLVPLGAYH 501
Query: 127 GSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEY 186
G G+R G +L+A D+ F S C++GTG S+E+L ++ L +
Sbjct: 502 GRGKRTGFYGAYLLACY-----DSETEEFQSVCKIGTGFSEEDLKSLAENLNQHV----- 551
Query: 187 PKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRSEVF--SAPYSLRF 240
P Q + + DVW ++ + K+ LS +S R + LRF
Sbjct: 552 ---IPTKSQQYSVSDVLECDVWFDAVQVWEIKAADLSKSSTHRGAEGKTGEEGRGIGLRF 608
Query: 241 PRIDRVRYDK 250
PR +R+R DK
Sbjct: 609 PRFERIRDDK 618
>gi|388452388|ref|NP_001252899.1| DNA ligase 3 [Macaca mulatta]
gi|355568415|gb|EHH24696.1| DNA ligase 3 [Macaca mulatta]
gi|380812704|gb|AFE78226.1| DNA ligase 3 isoform alpha precursor [Macaca mulatta]
gi|383418321|gb|AFH32374.1| DNA ligase 3 isoform alpha precursor [Macaca mulatta]
Length = 1009
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 101/206 (49%), Gaps = 20/206 (9%)
Query: 67 VDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIG 123
D + + +E +E G+VLKD+ +EPG R WLK+K +Y+ G+ D++++G
Sbjct: 643 ADMITRVIREGLE----GLVLKDVKGTYEPGKR--HWLKVKKDYLNEGAMADTADLVVLG 696
Query: 124 GYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRK 183
+YG G +GG ++ FL+ D +++ + + G D L + +L +
Sbjct: 697 AFYGQGSKGGMMSIFLMGCY-----DPGSQKWCTVTKCAGGHDDATLARLQNELD-MVKI 750
Query: 184 YEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA-PYSLRFPR 242
+ P + P S+ +V N PD + P+K+ + IT +SE +A S+RFPR
Sbjct: 751 SKDPSKIP-SWLKV--NKIYYPDFIVPDPKKAAVWEITG-AEFSKSEAHTADGISIRFPR 806
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSS 268
R+R DK W ++ EL S
Sbjct: 807 CTRIRDDKDWKSATNLPQLKELYQLS 832
>gi|291405585|ref|XP_002719279.1| PREDICTED: DNA ligase (ATP) 3 isoform 3 [Oryctolagus cuniculus]
Length = 952
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 101/206 (49%), Gaps = 20/206 (9%)
Query: 67 VDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIG 123
D + + +E +E G+VLKD+ +EPG R WLK+K +Y+ G+ D++++G
Sbjct: 645 ADMINRVIREGLE----GLVLKDVKGTYEPGKRH--WLKVKKDYLNEGAMADTADLVVLG 698
Query: 124 GYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRK 183
+YG G +GG ++ FL+ D +++ + + G D L + +L +
Sbjct: 699 AFYGQGSKGGMMSIFLMGCY-----DPSSQKWCTVTKCAGGHDDATLARLQKELD-MVKI 752
Query: 184 YEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA-PYSLRFPR 242
+ P + P S+ ++ N PD + P+K+ + IT +SE +A S+RFPR
Sbjct: 753 SKDPSKIP-SWLKI--NKIYYPDFIVPDPKKAAVWEITG-AEFSKSEAHTADGISIRFPR 808
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSS 268
R+R DK W ++ EL S
Sbjct: 809 CTRIRDDKDWKSATNLPQLKELYQLS 834
>gi|410259054|gb|JAA17493.1| ligase III, DNA, ATP-dependent [Pan troglodytes]
Length = 1009
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 97/196 (49%), Gaps = 16/196 (8%)
Query: 77 TIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGG 133
I+ EG+VLKD+ +EPG R WLK+K +Y+ G+ D++++G +YG G +GG
Sbjct: 649 VIQEGLEGLVLKDVKGTYEPGKRH--WLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGG 706
Query: 134 EVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPS 193
++ FL+ D +++ + + G D L A + K + + P + P S
Sbjct: 707 MMSIFLMGCY-----DPGSQKWCTVTKCAGGHDDATL-ARLQKELDMVKISKDPSKIP-S 759
Query: 194 FYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA-PYSLRFPRIDRVRYDKPW 252
+ +V N PD + P+K+ + IT +SE +A S+RFPR R+R DK W
Sbjct: 760 WLKV--NKIYYPDFIVPDPKKAAVWEITG-AEFSKSEAHTADGISIRFPRCTRIRDDKDW 816
Query: 253 HDCLDVQSFVELVHSS 268
++ EL S
Sbjct: 817 KSATNLPQLKELYQLS 832
>gi|397494352|ref|XP_003818045.1| PREDICTED: DNA ligase 3 [Pan paniscus]
Length = 738
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 97/196 (49%), Gaps = 16/196 (8%)
Query: 77 TIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGG 133
I+ EG+VLKD+ +EPG R WLK+K +Y+ G+ D++++G +YG G +GG
Sbjct: 378 VIQEGLEGLVLKDVKGTYEPGKR--HWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGG 435
Query: 134 EVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPS 193
++ FL+ D +++ + + G D L A + K + + P + P S
Sbjct: 436 MMSIFLMGCY-----DPGSQKWCTVTKCAGGHDDATL-ARLQKELDMVKISKDPSKIP-S 488
Query: 194 FYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA-PYSLRFPRIDRVRYDKPW 252
+ +V N PD + P+K+ + IT +SE +A S+RFPR R+R DK W
Sbjct: 489 WLKV--NKIYYPDFIVPDPKKAAVWEITG-AEFSKSEAHTADGISIRFPRCTRIRDDKDW 545
Query: 253 HDCLDVQSFVELVHSS 268
++ EL S
Sbjct: 546 KSATNLPQLKELYQLS 561
>gi|195109244|ref|XP_001999197.1| GI24375 [Drosophila mojavensis]
gi|193915791|gb|EDW14658.1| GI24375 [Drosophila mojavensis]
Length = 793
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 101/206 (49%), Gaps = 18/206 (8%)
Query: 68 DEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGG 124
+E+ + ++ EG+VLK S ++PG R+ WLK+K +Y+ G D++++G
Sbjct: 396 NELALMTAKVLQANLEGVVLKSPSSTYQPGKRN--WLKVKKDYLFGGKMADTADLVVLGA 453
Query: 125 YYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKY 184
+YGSG++GG ++ FL+ D + + +V +GL D D + +L
Sbjct: 454 WYGSGKKGGVLSIFLMGCY-----DARDHLWKTVTKVHSGLDDATNDEIHEEL------M 502
Query: 185 EYPKRAPPSFYQVTNNSKER--PDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
+ KRA + + K+ PDV ++PEK + IT T + S+RFPR
Sbjct: 503 KLTKRADANNIPNWLHCKKALIPDVLAKTPEKMPVWEITGAEFTQSEAHTAGGISIRFPR 562
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSS 268
I R+R DK + D+ +L +S
Sbjct: 563 ITRLRSDKCAKEANDLAHLEQLYAAS 588
>gi|22595826|gb|AAN02858.1| DNA ligase-like protein [lumpy skin disease virus]
Length = 559
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 108/214 (50%), Gaps = 22/214 (10%)
Query: 42 LSQLRSQIMAADQTGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSG 101
++++++++M ++ + + D++ K + I+ + EG++LK + + PG R
Sbjct: 349 INEIKNKVMVSE-------AFYVYKEDDLNKIMDDVIKKKLEGLILKGINIDYVPGKRG- 400
Query: 102 KWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISF 158
WLK+K +Y+ GS D++++G YYG G +GG + FL+ ++ + + + ++
Sbjct: 401 -WLKMKKDYLDDGSMADSADLVVLGSYYGKGSKGGAPSIFLMGCYDKESNN---WKTVTK 456
Query: 159 CRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIIL 218
C +G D+ L V +++ F K + P + V + PD + P+KS +
Sbjct: 457 C---SGHDDDTLKKVQKEIE--FLKISKDTKKIPKWLIV--DKIYYPDFVVCDPKKSQVW 509
Query: 219 SITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPW 252
I+ T + S+RFPR ++RYDK W
Sbjct: 510 EISGASFTKSIHHTADGISIRFPRFKKIRYDKNW 543
>gi|403283359|ref|XP_003933090.1| PREDICTED: DNA ligase 3 isoform 2 [Saimiri boliviensis boliviensis]
Length = 954
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 101/206 (49%), Gaps = 20/206 (9%)
Query: 67 VDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIG 123
D + + +E +E G+VLKD+ +EPG R WLK+K +Y+ G+ D++++G
Sbjct: 643 ADMITRVIREGLE----GLVLKDVKGTYEPGKRH--WLKVKKDYLNEGAMADTADLVVLG 696
Query: 124 GYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRK 183
+YG G +GG ++ FL+ D +++ + + G D L A + K +
Sbjct: 697 AFYGQGSKGGMMSIFLMGCY-----DPGSQKWCTVTKCAGGHDDATL-ARLQKELDMVKI 750
Query: 184 YEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA-PYSLRFPR 242
+ P + P S+ +V N PD + P+K+ + IT +SE +A S+RFPR
Sbjct: 751 SKDPSKIP-SWLKV--NKIYYPDFIVPDPKKAAVWEITG-AEFSKSEAHTADGISIRFPR 806
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSS 268
R+R DK W ++ EL S
Sbjct: 807 CTRIRDDKDWKSATNLPQLKELYQLS 832
>gi|332848014|ref|XP_511409.3| PREDICTED: DNA ligase 3 isoform 2 [Pan troglodytes]
gi|410212976|gb|JAA03707.1| ligase III, DNA, ATP-dependent [Pan troglodytes]
gi|410306904|gb|JAA32052.1| ligase III, DNA, ATP-dependent [Pan troglodytes]
Length = 1009
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 97/196 (49%), Gaps = 16/196 (8%)
Query: 77 TIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGG 133
I+ EG+VLKD+ +EPG R WLK+K +Y+ G+ D++++G +YG G +GG
Sbjct: 649 VIQEGLEGLVLKDVKGTYEPGKRH--WLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGG 706
Query: 134 EVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPS 193
++ FL+ D +++ + + G D L A + K + + P + P S
Sbjct: 707 MMSIFLMGCY-----DPGSQKWCTVTKCAGGHDDATL-ARLQKELDMVKISKDPSKIP-S 759
Query: 194 FYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA-PYSLRFPRIDRVRYDKPW 252
+ +V N PD + P+K+ + IT +SE +A S+RFPR R+R DK W
Sbjct: 760 WLKV--NKIYYPDFIVPDPKKAAVWEITG-AEFSKSEAHTADGISIRFPRCTRIRDDKDW 816
Query: 253 HDCLDVQSFVELVHSS 268
++ EL S
Sbjct: 817 KSATNLPQLKELYQLS 832
>gi|410339187|gb|JAA38540.1| ligase III, DNA, ATP-dependent [Pan troglodytes]
Length = 1009
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 97/196 (49%), Gaps = 16/196 (8%)
Query: 77 TIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGG 133
I+ EG+VLKD+ +EPG R WLK+K +Y+ G+ D++++G +YG G +GG
Sbjct: 649 VIQEGLEGLVLKDVKGTYEPGKRH--WLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGG 706
Query: 134 EVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPS 193
++ FL+ D +++ + + G D L A + K + + P + P S
Sbjct: 707 MMSIFLMGCY-----DPGSQKWCTVTKCAGGHDDATL-ARLQKELDMVKISKDPSKIP-S 759
Query: 194 FYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA-PYSLRFPRIDRVRYDKPW 252
+ +V N PD + P+K+ + IT +SE +A S+RFPR R+R DK W
Sbjct: 760 WLKV--NKIYYPDFIVPDPKKAAVWEITG-AEFSKSEAHTADGISIRFPRCTRIRDDKDW 816
Query: 253 HDCLDVQSFVELVHSS 268
++ EL S
Sbjct: 817 KSATNLPQLKELYQLS 832
>gi|390938388|ref|YP_006402126.1| ATP-dependent DNA ligase I [Desulfurococcus fermentans DSM 16532]
gi|390191495|gb|AFL66551.1| DNA ligase I, ATP-dependent Dnl1 [Desulfurococcus fermentans DSM
16532]
Length = 610
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 104/207 (50%), Gaps = 23/207 (11%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLII 122
+V E+EKFF + I + EG+++K L GS ++ G R W+K K +Y D +D++++
Sbjct: 401 DVKELEKFFLKAISDGAEGVMVKALHDGSIYQAGTRGWLWIKFKRDYRSEMIDTVDLVVV 460
Query: 123 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 182
G +YG GRRGG+ L+A A + F + C+VG+G DE+LD + LKPY R
Sbjct: 461 GAFYGKGRRGGKYGALLMA-----AYNDEKDVFETVCKVGSGFKDEDLDKLPEILKPYIR 515
Query: 183 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFS-----APYS 237
+ P+ ++ PDVW+E + I+ + I + + A S
Sbjct: 516 DRKSPRVV----------AEMEPDVWVEPALVAEIIGAELTLSPIHTCAYGRIKSDAGLS 565
Query: 238 LRFPRIDRVRYDKPWHDCLDVQSFVEL 264
+RFPR R R DK D VE+
Sbjct: 566 IRFPRFIRWRPDKRPEDATTSNELVEM 592
>gi|288559702|ref|YP_003423188.1| ATP-dependent DNA ligase DnlI [Methanobrevibacter ruminantium M1]
gi|288542412|gb|ADC46296.1| ATP-dependent DNA ligase DnlI [Methanobrevibacter ruminantium M1]
Length = 550
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 90/193 (46%), Gaps = 38/193 (19%)
Query: 66 NVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVLIIGGY 125
N+D+ F ++IE EGI++KD + PG R K LKLK E LD ++IGG
Sbjct: 381 NIDDAVDLFNKSIEGGHEGIMIKDCDEPYIPGIRGKKMLKLKAE----PETLDAVVIGGV 436
Query: 126 YGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYE 185
G G+RG + +++AL R D + VGTGLSD++L + K++ + E
Sbjct: 437 KGIGKRGDFIGSYVIAL--RDEND----QLQPIAHVGTGLSDDDLANLTEKMEA-LKITE 489
Query: 186 YPKRA---PPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 242
R P +++ + ++SPE +SA YSLRFP
Sbjct: 490 KGTRITVHPKIVFEIAYSE------IVKSPE------------------YSAGYSLRFPV 525
Query: 243 IDRVRYDKPWHDC 255
+ R+R DK D
Sbjct: 526 VKRIRDDKGVDDI 538
>gi|291405583|ref|XP_002719278.1| PREDICTED: DNA ligase (ATP) 3 isoform 2 [Oryctolagus cuniculus]
Length = 1011
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 101/206 (49%), Gaps = 20/206 (9%)
Query: 67 VDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIG 123
D + + +E +E G+VLKD+ +EPG R WLK+K +Y+ G+ D++++G
Sbjct: 645 ADMINRVIREGLE----GLVLKDVKGTYEPGKRH--WLKVKKDYLNEGAMADTADLVVLG 698
Query: 124 GYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRK 183
+YG G +GG ++ FL+ D +++ + + G D L + +L +
Sbjct: 699 AFYGQGSKGGMMSIFLMGCY-----DPSSQKWCTVTKCAGGHDDATLARLQKELD-MVKI 752
Query: 184 YEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA-PYSLRFPR 242
+ P + P S+ ++ N PD + P+K+ + IT +SE +A S+RFPR
Sbjct: 753 SKDPSKIP-SWLKI--NKIYYPDFIVPDPKKAAVWEITG-AEFSKSEAHTADGISIRFPR 808
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSS 268
R+R DK W ++ EL S
Sbjct: 809 CTRIRDDKDWKSATNLPQLKELYQLS 834
>gi|291405581|ref|XP_002719277.1| PREDICTED: DNA ligase (ATP) 3 isoform 1 [Oryctolagus cuniculus]
Length = 1012
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 101/206 (49%), Gaps = 20/206 (9%)
Query: 67 VDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIG 123
D + + +E +E G+VLKD+ +EPG R WLK+K +Y+ G+ D++++G
Sbjct: 646 ADMINRVIREGLE----GLVLKDVKGTYEPGKRH--WLKVKKDYLNEGAMADTADLVVLG 699
Query: 124 GYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRK 183
+YG G +GG ++ FL+ D +++ + + G D L + +L +
Sbjct: 700 AFYGQGSKGGMMSIFLMGCY-----DPSSQKWCTVTKCAGGHDDATLARLQKELD-MVKI 753
Query: 184 YEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA-PYSLRFPR 242
+ P + P S+ ++ N PD + P+K+ + IT +SE +A S+RFPR
Sbjct: 754 SKDPSKIP-SWLKI--NKIYYPDFIVPDPKKAAVWEITG-AEFSKSEAHTADGISIRFPR 809
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSS 268
R+R DK W ++ EL S
Sbjct: 810 CTRIRDDKDWKSATNLPQLKELYQLS 835
>gi|297700536|ref|XP_002827303.1| PREDICTED: DNA ligase 3 isoform 3 [Pongo abelii]
Length = 949
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 101/206 (49%), Gaps = 20/206 (9%)
Query: 67 VDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIG 123
D + + +E +E G+VLKD+ +EPG R WLK+K +Y+ G+ D++++G
Sbjct: 643 ADMITRVIREGLE----GLVLKDVKGTYEPGKRH--WLKVKKDYLNEGAMADTADLVVLG 696
Query: 124 GYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRK 183
+YG G +GG ++ FL+ D +++ + + G D L + +L +
Sbjct: 697 AFYGQGSKGGMMSIFLMGCY-----DPGSQKWCTVTKCAGGHDDATLARLQKELD-MVKI 750
Query: 184 YEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA-PYSLRFPR 242
+ P + P S+ ++ N PD + P+K+ + IT +SE +A S+RFPR
Sbjct: 751 SKDPSKIP-SWLKI--NKIYYPDFIVPDPKKAAVWEITG-AEFSKSEAHTADGISIRFPR 806
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSS 268
R+R DK W ++ EL S
Sbjct: 807 CTRIRDDKDWKSATNLPQLKELYQLS 832
>gi|426348729|ref|XP_004041980.1| PREDICTED: DNA ligase 3 isoform 1 [Gorilla gorilla gorilla]
Length = 1009
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 97/196 (49%), Gaps = 16/196 (8%)
Query: 77 TIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGG 133
I+ EG+VLKD+ +EPG R WLK+K +Y+ G+ D++++G +YG G +GG
Sbjct: 649 VIQEGLEGLVLKDVKGTYEPGKRH--WLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGG 706
Query: 134 EVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPS 193
++ FL+ D +++ + + G D L A + K + + P + P S
Sbjct: 707 MMSIFLMGCY-----DPGSQKWCTVTKCAGGHDDATL-ARLQKELDMVKISKDPSKIP-S 759
Query: 194 FYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA-PYSLRFPRIDRVRYDKPW 252
+ +V N PD + P+K+ + IT +SE +A S+RFPR R+R DK W
Sbjct: 760 WLKV--NKIYYPDFIVPDPKKAAVWEITG-AEFSKSEAHTADGISIRFPRCTRIRDDKDW 816
Query: 253 HDCLDVQSFVELVHSS 268
++ EL S
Sbjct: 817 KSATNLPQLKELYQLS 832
>gi|448603029|ref|ZP_21656850.1| DNA ligase, ATP dependent [Haloferax sulfurifontis ATCC BAA-897]
gi|445746225|gb|ELZ97687.1| DNA ligase, ATP dependent [Haloferax sulfurifontis ATCC BAA-897]
Length = 585
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 89/189 (47%), Gaps = 28/189 (14%)
Query: 62 LVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVLI 121
L++ + +E+ + + ++ EGI+LK+ + + PGDR WLK KP+ LD+++
Sbjct: 407 LLSDDAEEIAAYEADALDAGHEGIMLKNPDAPYSPGDRGKNWLKRKPDV----ETLDLVV 462
Query: 122 IGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYF 181
G +G GRR + FL L+ R D+ F + +V TG++DEEL + L+P
Sbjct: 463 TGAEWGEGRRAEFLGTFL--LSARVEADSGDDAFETIGKVATGITDEELAELTDLLEPEI 520
Query: 182 RKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFP 241
+ E RP V E + I S T +S+ Y+LRFP
Sbjct: 521 EREE------------GKEVDIRPSVVFEVGYEEIQASPT----------YSSGYALRFP 558
Query: 242 RIDRVRYDK 250
R VR DK
Sbjct: 559 RFVTVREDK 567
>gi|348567739|ref|XP_003469656.1| PREDICTED: DNA ligase 3-like isoform 1 [Cavia porcellus]
Length = 1010
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 101/206 (49%), Gaps = 20/206 (9%)
Query: 67 VDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIG 123
D + + +E +E G+VLKD+ +EPG R WLK+K +Y+ G+ D++++G
Sbjct: 642 ADMINRVIREGLE----GLVLKDVKGTYEPGKRH--WLKVKKDYLNEGAMADTADLVVLG 695
Query: 124 GYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRK 183
+YG G +GG ++ FL+ D +++ + + G D L + +L +
Sbjct: 696 AFYGQGSKGGMMSIFLMGCY-----DPSSQKWCTVTKCAGGHDDATLARLQKELD-MVKI 749
Query: 184 YEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA-PYSLRFPR 242
+ P + P S+ ++ N PD + P+K+ + IT +SE +A S+RFPR
Sbjct: 750 SKDPSKIP-SWLKI--NKIYYPDFIVPDPKKAAVWEITG-AEFSKSEAHTADGISIRFPR 805
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSS 268
R+R DK W ++ EL S
Sbjct: 806 CTRIRDDKDWKSATNLPQLKELYQLS 831
>gi|145482377|ref|XP_001427211.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124394291|emb|CAK59813.1| unnamed protein product [Paramecium tetraurelia]
Length = 568
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 104/211 (49%), Gaps = 35/211 (16%)
Query: 62 LVAH---NVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLD 118
+++H N +E+++F+K+ + + EGI++K + + PG R+ WLK+K E D+D
Sbjct: 373 IISHKFANENEMDRFYKQALLDGLEGIMIKR-DTFYTPGSRND-WLKIKKE-----KDID 425
Query: 119 VLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLK 178
++++GGYYG G+R + FL+ + E R ++GTG SD++L+ + K
Sbjct: 426 LVVLGGYYGQGKRQQWLGSFLLGIYENG-------RLHPIAKIGTGFSDQKLEELT---K 475
Query: 179 PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSD------IRTIRSEVF 232
Y K P + PS K++P VW + + +T D + ++
Sbjct: 476 RYMSK---PSGSCPSH---LIGFKDQPHVWFSQND---VWEVTYDTVSASPLYPAQNSQL 526
Query: 233 SAPYSLRFPRIDRVRYDKPWHDCLDVQSFVE 263
+ S+RFPR R R DK +Q VE
Sbjct: 527 NTGISVRFPRFKRERPDKTIEQSGPIQDLVE 557
>gi|71027867|ref|XP_763577.1| DNA ligase I [Theileria parva strain Muguga]
gi|68350530|gb|EAN31294.1| DNA ligase I, putative [Theileria parva]
Length = 858
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 99/201 (49%), Gaps = 29/201 (14%)
Query: 65 HNVDEVEKFFKETIENRD------EGIVLKDLGSK--WEPGDRSGKWLKLKPEYIRAGSD 116
+++ ++ F K ++ EG+++K L K +EP RS KW+K K +YI +D
Sbjct: 651 QSIEHIDDFLKSALQGLRYGAYSCEGLMIKTLDDKATYEPQARSNKWIKYKKDYITGLAD 710
Query: 117 -LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVT 175
+D++ IG ++G G+R +L+A+ + P + Y + C+ GTG +D+ L +
Sbjct: 711 SVDLVPIGAFFGKGKRISVFGSYLLAVYD-PMQEVYQ----ALCKTGTGFTDQALKDLHD 765
Query: 176 KLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTI--RS 229
L+ K + PSFY V+ K PDVW + K+ LS+ S + T R
Sbjct: 766 SLQKDITKTK------PSFYDVS--EKMEPDVWFLPKKVWECKAADLSL-SPVYTAANRL 816
Query: 230 EVFSAPYSLRFPRIDRVRYDK 250
LRFPR RVR DK
Sbjct: 817 NANEKGIGLRFPRFLRVREDK 837
>gi|377830089|ref|YP_005296337.1| unnamed protein product [Cotia virus SPAn232]
gi|377814332|gb|AFB76951.1| DNA ligase [Cotia virus SPAn232]
Length = 559
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 111/227 (48%), Gaps = 24/227 (10%)
Query: 42 LSQLRSQIMAADQTGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSG 101
+++++++IM + +S V +N+D + ++ + EG +LK + PG R
Sbjct: 345 INEIKNKIMLS-------YSCVVYNIDALSDEIQKLLNKGLEGAILKYPNDMYIPGKR-- 395
Query: 102 KWLKLKPEYIRAGS---DLDVLIIGGYYGSGRR-GGEVAQFLVALAERPAPDTYPRRFIS 157
KW+K+K +Y+ G+ D++++G YYG G+R GG ++ FL+ + DT + ++
Sbjct: 396 KWIKIKRDYLNDGAMADSADLVVLGAYYGKGKRYGGIMSIFLMGCYDE---DTNTWKTVT 452
Query: 158 FCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSII 217
C +G +DE L + + K K P++ + NS PD + +P+ S +
Sbjct: 453 KC---SGFNDETLKELQS---IDMIKISKNKDKIPTWLNI--NSIHYPDFIVNNPKTSPV 504
Query: 218 LSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 264
I+ T + S+RFPR +R DK W ++Q + L
Sbjct: 505 WEISGYEFTKSPSHTADGISIRFPRCKNIRNDKDWLSATNLQELITL 551
>gi|255574286|ref|XP_002528057.1| DNA ligase I, putative [Ricinus communis]
gi|223532518|gb|EEF34307.1| DNA ligase I, putative [Ricinus communis]
Length = 1360
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 113/231 (48%), Gaps = 32/231 (13%)
Query: 51 AADQTGEPCWSLVAHNVDE--VEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKL 106
A + T E C + + +++ E + F + + + EGI++K L +++ P R+ WLK+
Sbjct: 1137 AKETTVEACDASLTNDITETKINSFLENALRSSCEGIMVKTLDDHAEYSPSKRTDTWLKV 1196
Query: 107 KPEYIR-AGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGL 165
K +Y+ + LD++ IG ++G+GR+ G + FL+A P+T F S CRV +G
Sbjct: 1197 KRDYVEELNNSLDLVPIGAWHGNGRKAGWYSPFLMACYN---PET--EEFQSVCRVMSGF 1251
Query: 166 SDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIR 225
S DA T++K YF + P +Y+ + E PD W SPE ++ I
Sbjct: 1252 S----DAFYTEMKEYFSGDRILLKK-PHYYR----TAEVPDKWF-SPE--VVWEIRGAEF 1299
Query: 226 TIRSEVFSAP---------YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 267
T+ S V A S+RFPR R D+ +C + ++ +S
Sbjct: 1300 TV-SPVHQAAVGLVHPSRGISMRFPRFIRSVTDRNAEECSTAEDIADMFNS 1349
>gi|195391356|ref|XP_002054326.1| GJ24382 [Drosophila virilis]
gi|194152412|gb|EDW67846.1| GJ24382 [Drosophila virilis]
Length = 818
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 99/204 (48%), Gaps = 14/204 (6%)
Query: 68 DEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGG 124
+E+ + ++ EG+VLK ++PG R+ WLK+K +Y+ G D++++G
Sbjct: 418 NELAMMTAKVLQANLEGVVLKSPEGTYQPGKRN--WLKVKKDYLFGGKMADTADLVVLGA 475
Query: 125 YYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKY 184
+YGSG++GG ++ FL+ D R + + +V +GL D D V L +
Sbjct: 476 WYGSGKKGGVLSIFLMG-----CYDARDRLWKTVTKVHSGLDDASNDEVHESLMKLTERA 530
Query: 185 EYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRID 244
+ K P++ + PDV + PE+ + IT T +A S+RFPRI
Sbjct: 531 DASK--IPNW--LLCKKALIPDVLAKIPEQMPVWEITGAEFTQSEAHTAAGISIRFPRIT 586
Query: 245 RVRYDKPWHDCLDVQSFVELVHSS 268
R+R DK D++ +L +S
Sbjct: 587 RLRSDKSAMQANDLEHLEQLYAAS 610
>gi|403283357|ref|XP_003933089.1| PREDICTED: DNA ligase 3 isoform 1 [Saimiri boliviensis boliviensis]
Length = 1013
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 101/206 (49%), Gaps = 20/206 (9%)
Query: 67 VDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIG 123
D + + +E +E G+VLKD+ +EPG R WLK+K +Y+ G+ D++++G
Sbjct: 643 ADMITRVIREGLE----GLVLKDVKGTYEPGKR--HWLKVKKDYLNEGAMADTADLVVLG 696
Query: 124 GYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRK 183
+YG G +GG ++ FL+ D +++ + + G D L A + K +
Sbjct: 697 AFYGQGSKGGMMSIFLMGCY-----DPGSQKWCTVTKCAGGHDDATL-ARLQKELDMVKI 750
Query: 184 YEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA-PYSLRFPR 242
+ P + P S+ +V N PD + P+K+ + IT +SE +A S+RFPR
Sbjct: 751 SKDPSKIP-SWLKV--NKIYYPDFIVPDPKKAAVWEITG-AEFSKSEAHTADGISIRFPR 806
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSS 268
R+R DK W ++ EL S
Sbjct: 807 CTRIRDDKDWKSATNLPQLKELYQLS 832
>gi|297700534|ref|XP_002827302.1| PREDICTED: DNA ligase 3 isoform 2 [Pongo abelii]
Length = 1009
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 101/206 (49%), Gaps = 20/206 (9%)
Query: 67 VDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIG 123
D + + +E +E G+VLKD+ +EPG R WLK+K +Y+ G+ D++++G
Sbjct: 643 ADMITRVIREGLE----GLVLKDVKGTYEPGKR--HWLKVKKDYLNEGAMADTADLVVLG 696
Query: 124 GYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRK 183
+YG G +GG ++ FL+ D +++ + + G D L A + K +
Sbjct: 697 AFYGQGSKGGMMSIFLMGCY-----DPGSQKWCTVTKCAGGHDDATL-ARLQKELDMVKI 750
Query: 184 YEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA-PYSLRFPR 242
+ P + P S+ ++ N PD + P+K+ + IT +SE +A S+RFPR
Sbjct: 751 SKDPSKIP-SWLKI--NKIYYPDFIVPDPKKAAVWEITG-AEFSKSEAHTADGISIRFPR 806
Query: 243 IDRVRYDKPWHDCLDVQSFVELVHSS 268
R+R DK W ++ EL S
Sbjct: 807 CTRIRDDKDWKSATNLPQLKELYQLS 832
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.314 0.132 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,441,339,458
Number of Sequences: 23463169
Number of extensions: 612659105
Number of successful extensions: 2219793
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1089
Number of HSP's successfully gapped in prelim test: 11017
Number of HSP's that attempted gapping in prelim test: 2098149
Number of HSP's gapped (non-prelim): 69229
length of query: 824
length of database: 8,064,228,071
effective HSP length: 151
effective length of query: 673
effective length of database: 8,816,256,848
effective search space: 5933340858704
effective search space used: 5933340858704
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 81 (35.8 bits)