Your job contains 1 sequence.
>003388
MAVDKDKPQDEASIFRFCKIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKD
VDDYLATFEPLLFEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADEVES
ISPNDLLLLSKEEFKEGSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRL
LNIHSLITSSVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQD
QSWKIPGLLHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHAT
PARVHSKGGLREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNE
LKPEVVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHS
VNSVAIDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKL
NHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFK
RLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSF
FDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQ
ERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRA
KSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRVSKPYASFFSDENLESMRKNATTDNV
QGADGHVPHDDETMHYANTGDADQGQADDIDNADGDAEMYDADE
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 003388
(824 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2130384 - symbol:MAA3 "MAGATAMA 3" species:370... 2689 8.3e-280 1
DICTYBASE|DDB_G0274399 - symbol:DDB_G0274399 "DNA2/NAM7 h... 1018 2.3e-112 2
POMBASE|SPAC6G9.10c - symbol:sen1 "ATP-dependent 5' to 3'... 651 3.7e-87 4
SGD|S000004422 - symbol:SEN1 "Presumed helicase and subun... 627 3.9e-85 3
DICTYBASE|DDB_G0285243 - symbol:DDB_G0285243 "putative sp... 575 2.9e-84 4
POMBASE|SPBC29A10.10c - symbol:SPBC29A10.10c "tRNA-splici... 637 7.8e-84 4
TAIR|locus:2059088 - symbol:AT2G19120 "AT2G19120" species... 621 2.5e-83 4
TAIR|locus:2126480 - symbol:AT4G30100 species:3702 "Arabi... 617 3.3e-82 4
UNIPROTKB|G4NIZ8 - symbol:MGG_02784 "DNA-binding protein ... 623 1.9e-81 3
CGD|CAL0003335 - symbol:SEN1 species:5476 "Candida albica... 663 1.3e-78 2
DICTYBASE|DDB_G0268660 - symbol:DDB_G0268660 "DNA2/NAM7 h... 538 1.0e-64 3
DICTYBASE|DDB_G0268924 - symbol:DDB_G0268924 "Helicase SE... 523 3.7e-64 4
DICTYBASE|DDB_G0289529 - symbol:DDB_G0289529 species:4468... 548 8.0e-64 3
DICTYBASE|DDB_G0268914 - symbol:DDB_G0268914 species:4468... 539 4.5e-63 3
DICTYBASE|DDB_G0268662 - symbol:DDB_G0268662 "DNA2/NAM7 h... 539 1.8e-62 3
ZFIN|ZDB-GENE-070402-1 - symbol:setx "senataxin" species:... 531 1.0e-54 3
UNIPROTKB|E1C4T7 - symbol:Gga.18015 "Uncharacterized prot... 511 1.2e-53 3
UNIPROTKB|F1S0U6 - symbol:SETX "Uncharacterized protein" ... 489 1.8e-50 3
UNIPROTKB|F1PHA4 - symbol:SETX "Uncharacterized protein" ... 490 2.9e-49 4
MGI|MGI:2443480 - symbol:Setx "senataxin" species:10090 "... 478 8.2e-48 3
UNIPROTKB|Q7Z333 - symbol:SETX "Probable helicase senatax... 484 2.9e-47 3
UNIPROTKB|E1BAS6 - symbol:SETX "Uncharacterized protein" ... 472 3.0e-47 4
UNIPROTKB|D4AEB3 - symbol:Setx "Protein Setx" species:101... 476 4.6e-47 3
ASPGD|ASPL0000056713 - symbol:AN0646 species:162425 "Emer... 477 5.4e-46 2
TAIR|locus:2171007 - symbol:LBA1 "LOW-LEVEL BETA-AMYLASE ... 475 6.4e-46 4
CGD|CAL0003666 - symbol:NAM7 species:5476 "Candida albica... 478 1.0e-45 2
UNIPROTKB|Q5A507 - symbol:NAM7 "Putative uncharacterized ... 478 1.0e-45 2
MGI|MGI:107995 - symbol:Upf1 "UPF1 regulator of nonsense ... 480 1.6e-45 2
UNIPROTKB|E1C0J4 - symbol:UPF1 "Uncharacterized protein" ... 479 2.0e-45 2
UNIPROTKB|G4ND47 - symbol:MGG_00976 "Regulator-nonsense t... 476 2.1e-45 2
UNIPROTKB|E1BEK9 - symbol:UPF1 "Uncharacterized protein" ... 479 2.1e-45 2
UNIPROTKB|E1C0J3 - symbol:UPF1 "Uncharacterized protein" ... 479 2.1e-45 2
UNIPROTKB|Q92900 - symbol:UPF1 "Regulator of nonsense tra... 479 2.2e-45 2
UNIPROTKB|E2RL81 - symbol:UPF1 "Uncharacterized protein" ... 479 2.2e-45 2
ZFIN|ZDB-GENE-040426-2836 - symbol:upf1 "upf1 regulator o... 472 1.2e-44 2
WB|WBGene00004880 - symbol:smg-2 species:6239 "Caenorhabd... 460 2.9e-44 2
FB|FBgn0030354 - symbol:Upf1 "Upf1" species:7227 "Drosoph... 469 3.8e-44 2
SGD|S000004685 - symbol:NAM7 "ATP-dependent RNA helicase ... 449 1.1e-42 2
TAIR|locus:2018536 - symbol:AT1G65780 species:3702 "Arabi... 441 1.6e-42 2
POMBASE|SPAC16C9.06c - symbol:upf1 "ATP-dependent RNA hel... 428 7.4e-42 3
TAIR|locus:2166183 - symbol:AT5G37160 species:3702 "Arabi... 417 1.0e-41 3
DICTYBASE|DDB_G0288923 - symbol:upf1 "regulator of nonsen... 451 1.2e-41 3
TAIR|locus:2166173 - symbol:AT5G37150 species:3702 "Arabi... 411 9.9e-41 3
TAIR|locus:2018561 - symbol:AT1G65810 species:3702 "Arabi... 449 1.4e-40 3
TAIR|locus:2152627 - symbol:AT5G37030 species:3702 "Arabi... 430 7.0e-40 2
TAIR|locus:2135472 - symbol:AT4G05540 species:3702 "Arabi... 405 3.5e-39 3
TAIR|locus:2166163 - symbol:AT5G37140 species:3702 "Arabi... 398 4.3e-39 4
RGD|1565575 - symbol:Setx "senataxin" species:10116 "Ratt... 269 5.8e-38 2
TAIR|locus:2173033 - symbol:AT5G52090 species:3702 "Arabi... 397 2.2e-37 3
GENEDB_PFALCIPARUM|MAL7P1.12 - symbol:MAL7P1.12 "erythroc... 412 6.3e-37 2
UNIPROTKB|Q8IC35 - symbol:MAL7P1.12 "Erythrocyte membrane... 412 6.3e-37 2
TAIR|locus:2056896 - symbol:AT2G03270 species:3702 "Arabi... 354 6.5e-34 3
POMBASE|SPCC737.07c - symbol:SPCC737.07c "DNA polymerase ... 321 2.9e-32 3
FB|FBgn0035842 - symbol:CG7504 species:7227 "Drosophila m... 345 3.5e-32 4
RGD|2322000 - symbol:LOC100363957 "hypothetical protein L... 384 1.1e-31 3
TAIR|locus:2162858 - symbol:AT5G35970 species:3702 "Arabi... 350 1.9e-31 2
UNIPROTKB|Q6ZU11 - symbol:Q6ZU11 "Uncharacterized protein... 389 2.3e-31 2
UNIPROTKB|E1BQD2 - symbol:C4H4orf21 "Uncharacterized prot... 379 2.5e-31 3
UNIPROTKB|G5EA02 - symbol:C4orf21 "Uncharacterized protei... 389 8.2e-31 2
UNIPROTKB|E1BG37 - symbol:E1BG37 "Uncharacterized protein... 380 1.2e-30 2
SGD|S000000978 - symbol:ECM32 "DNA dependent ATPase/DNA h... 189 2.4e-30 4
CGD|CAL0001700 - symbol:orf19.702 species:5476 "Candida a... 224 2.4e-30 3
UNIPROTKB|F1PCI1 - symbol:C4orf21 "Uncharacterized protei... 376 2.5e-29 3
DICTYBASE|DDB_G0271732 - symbol:DDB_G0271732 "AN1-type zi... 329 1.0e-28 3
UNIPROTKB|E1BMP7 - symbol:DNA2 "DNA replication ATP-depen... 190 7.6e-28 3
UNIPROTKB|E1BY42 - symbol:E1BY42 "Uncharacterized protein... 308 7.6e-28 2
UNIPROTKB|K7DXW3 - symbol:DNA2 "DNA replication nuclease ... 190 9.9e-28 3
UNIPROTKB|J9NRI6 - symbol:DNA2 "Uncharacterized protein" ... 175 1.2e-27 3
UNIPROTKB|P51530 - symbol:DNA2 "DNA replication ATP-depen... 305 1.7e-27 2
UNIPROTKB|J3KPX5 - symbol:DNA2 "DNA replication ATP-depen... 305 2.2e-27 2
UNIPROTKB|Q5ZKG3 - symbol:DNA2 "DNA replication ATP-depen... 186 2.6e-27 3
MGI|MGI:99954 - symbol:Ighmbp2 "immunoglobulin mu binding... 281 7.2e-27 3
UNIPROTKB|F6UZP1 - symbol:DNA2 "Uncharacterized protein" ... 175 8.5e-27 3
UNIPROTKB|E2QSH2 - symbol:E2QSH2 "Uncharacterized protein... 175 9.1e-27 3
UNIPROTKB|F1RY71 - symbol:IGHMBP2 "Uncharacterized protei... 296 2.7e-26 2
UNIPROTKB|H0Y455 - symbol:DNA2 "DNA replication ATP-depen... 305 4.0e-26 1
SGD|S000001500 - symbol:HCS1 "Hexameric DNA polymerase al... 281 5.2e-26 3
UNIPROTKB|Q8QHA5 - symbol:dna2 "DNA replication ATP-depen... 299 8.3e-26 2
UNIPROTKB|E2R760 - symbol:IGHMBP2 "Uncharacterized protei... 288 1.3e-25 2
UNIPROTKB|E2R8W1 - symbol:IGHMBP2 "Uncharacterized protei... 288 1.3e-25 2
RGD|1306791 - symbol:Dna2 "DNA replication helicase 2 hom... 297 1.4e-25 2
UNIPROTKB|Q60560 - symbol:IGHMBP2 "DNA-binding protein SM... 288 4.1e-25 2
UNIPROTKB|F1MHU8 - symbol:IGHMBP2 "Uncharacterized protei... 284 5.4e-25 2
UNIPROTKB|F1PYQ4 - symbol:DNA2 "Uncharacterized protein" ... 278 6.1e-25 2
RGD|68325 - symbol:Ighmbp2 "immunoglobulin mu binding pro... 283 7.1e-25 2
UNIPROTKB|Q9EQN5 - symbol:Ighmbp2 "DNA-binding protein SM... 283 7.1e-25 2
UNIPROTKB|E1C0Z0 - symbol:HELZ2 "Uncharacterized protein"... 303 1.7e-24 4
UNIPROTKB|P38935 - symbol:IGHMBP2 "DNA-binding protein SM... 281 3.1e-24 2
ZFIN|ZDB-GENE-070912-617 - symbol:si:dkey-97a13.6 "si:dke... 281 5.3e-24 3
TAIR|locus:2200996 - symbol:SDE3 "SILENCING DEFECTIVE" sp... 307 7.6e-24 3
RGD|1306056 - symbol:Pric285 "peroxisomal proliferator-ac... 295 1.4e-23 3
ZFIN|ZDB-GENE-090313-71 - symbol:dna2 "DNA replication he... 171 2.6e-23 3
MGI|MGI:2443732 - symbol:Dna2 "DNA replication helicase 2... 172 2.6e-23 4
WB|WBGene00016566 - symbol:eri-7 species:6239 "Caenorhabd... 180 4.4e-23 3
UNIPROTKB|Q4S102 - symbol:GSTENG00025786001 "Chromosome 5... 267 4.7e-23 2
ZFIN|ZDB-GENE-070424-144 - symbol:si:ch211-183d5.1 "si:ch... 255 6.5e-23 3
POMBASE|SPBC16D10.04c - symbol:dna2 "DNA replication endo... 284 9.1e-23 2
FB|FBgn0041164 - symbol:armi "armitage" species:7227 "Dro... 207 5.9e-22 3
UNIPROTKB|F1RXR7 - symbol:MOV10L1 "Uncharacterized protei... 187 5.6e-21 5
UNIPROTKB|Q9BYK8 - symbol:HELZ2 "Helicase with zinc finge... 249 6.3e-21 4
WARNING: Descriptions of 72 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2130384 [details] [associations]
symbol:MAA3 "MAGATAMA 3" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0009553 "embryo sac development"
evidence=IMP] [GO:0009875 "pollen-pistil interaction" evidence=IMP]
[GO:0010183 "pollen tube guidance" evidence=IMP] PROSITE:PS51198
GO:GO:0005524 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0004386 GO:GO:0009553 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 EMBL:Z97339 GO:GO:0010183 EMBL:AL161542 EMBL:EU915246
IPI:IPI00522212 PIR:E71420 RefSeq:NP_193292.3 UniGene:At.33168
ProteinModelPortal:B6SFA4 SMR:B6SFA4 PaxDb:B6SFA4 PRIDE:B6SFA4
EnsemblPlants:AT4G15570.1 GeneID:827233 KEGG:ath:AT4G15570
GeneFarm:2417 TAIR:At4g15570 HOGENOM:HOG000030627 KO:K10706
OMA:TIMREFT PhylomeDB:B6SFA4 ProtClustDB:CLSN2680970
Genevestigator:B6SFA4 GO:GO:0009875 InterPro:IPR026852
PANTHER:PTHR10887:SF27 Uniprot:B6SFA4
Length = 818
Score = 2689 (951.6 bits), Expect = 8.3e-280, P = 8.3e-280
Identities = 534/803 (66%), Positives = 645/803 (80%)
Query: 1 MAVDKDKPQDE--ASIFRFCKIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTY 58
MA+D K Q+E +S+ RF IILGWDY +L KE++ +N K+SK+ KL + VK+TY
Sbjct: 1 MAIDNGKLQEEEASSVTRFYNIILGWDYKQLTKENERKNRKDSKE----KLNV--VKNTY 54
Query: 59 KDVDDYLATFEPLLFEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADEV 118
KDVDDY TFEPLLFEEVKAQI+Q KD EE K+RLVMEC E +GFH VTYE +E
Sbjct: 55 KDVDDYFETFEPLLFEEVKAQILQNKDGEEASVCKMRLVMECNEGEGFHFLLVTYEHEED 114
Query: 119 ESISPNDLLLLSKEEFKEGSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKS- 177
E ++ NDLLLLSKEE K G++FP++Y FA+VEH Q NLLRLRMYLA +++ I K+ S
Sbjct: 115 EYLAQNDLLLLSKEEVK-GNSFPSSYGFAVVEHRQNNLLRLRMYLAEDIVQITKNTKSSR 173
Query: 178 -----QRLLNIHSLITSSVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSAS 232
Q L N+ SLITSS S ++KR+FSLK+C LSTI REY+ALRSV SLPFKDLI +A+
Sbjct: 174 TKSFIQALSNMRSLITSSASPIDKRVFSLKLCGLSTIIREYIALRSVSSLPFKDLIFTAA 233
Query: 233 EKSSGSQDQSWKIPGLLHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGL 292
EKS G D++WKI G L+E+ EN N SQ EAI GL RK+FVLIQGPPGTGKTQTIL +
Sbjct: 234 EKSCGFGDEAWKISGPLNEFFNENLNKSQKEAIDVGLSRKSFVLIQGPPGTGKTQTILSI 293
Query: 293 LSAILHATPARVHSKGGLREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDG 352
L AI+HATPARV SKG E+KRG ++ + EKYNHWGRASPW++G NPRD IMP DGDDG
Sbjct: 294 LGAIMHATPARVQSKGTDHEVKRGIQMTIQEKYNHWGRASPWILGVNPRDAIMPEDGDDG 353
Query: 353 FFPTTGNELKPEXXXXXXXXXXXXXXCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
FFPT+GNELKPE CAPSNSALDEIVLRLL++G+RDEN ++YTPKIVR
Sbjct: 354 FFPTSGNELKPEVVNASRKYRLRVLVCAPSNSALDEIVLRLLSSGLRDENAQTYTPKIVR 413
Query: 413 IGLKAHHSVNSVAIDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFS 472
IGLKAHHSV SV++DHLV QKR SA DK K G T D DSIR+AIL EA IV +TLSFS
Sbjct: 414 IGLKAHHSVASVSLDHLVAQKRG-SAIDKPKQGTTGTDIDSIRTAILEEAAIVFATLSFS 472
Query: 473 GSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHL 532
GSALL+K N GFDVVIIDEAAQAVEPATL+PLAT CKQVFLVGDP QLPATVIS VA+
Sbjct: 473 GSALLAKSNRGFDVVIIDEAAQAVEPATLIPLATRCKQVFLVGDPKQLPATVISTVAQDS 532
Query: 533 GYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEY 592
GYGTS+F+RLQ+AGYPVKMLKTQYRMHPE+RSFPS++FY+ ALEDGSD+E TTRDWH+Y
Sbjct: 533 GYGTSMFERLQKAGYPVKMLKTQYRMHPEIRSFPSKQFYEGALEDGSDIEAQTTRDWHKY 592
Query: 593 RCFGPFSFFDIHEGKESQ-PAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISP 651
RCFGPF FFDIHEGKESQ P +GS +N+DEV+FVLL++H+L++MYP+LKSSSQLAIISP
Sbjct: 593 RCFGPFCFFDIHEGKESQHPGATGSRVNLDEVEFVLLIYHRLVTMYPELKSSSQLAIISP 652
Query: 652 YRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYR 711
Y +QVK F++RFKE FG E++KVVDI TVDG QGREKDVAIFSCVRA++ IGFL++ R
Sbjct: 653 YNYQVKTFKDRFKEMFGTEAEKVVDINTVDGFQGREKDVAIFSCVRANENGQIGFLSNSR 712
Query: 712 RMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRVSKPYASFFSDENLESM 771
RMNVGITRAKSS+LVVG A+TL+ D W NL++SAE+++ LF+VSKP +FFS+ENLE+M
Sbjct: 713 RMNVGITRAKSSVLVVGSAATLKSDPLWKNLIESAEQRNRLFKVSKPLNNFFSEENLETM 772
Query: 772 RKNATTDNVQGADGHVPHDDETM 794
+ T++++ D + ++DE++
Sbjct: 773 K---LTEDMEIPDAPL-YEDESL 791
>DICTYBASE|DDB_G0274399 [details] [associations]
symbol:DDB_G0274399 "DNA2/NAM7 helicase family
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] InterPro:IPR003593 SMART:SM00382
dictyBase:DDB_G0274399 GO:GO:0005524 GO:GO:0005634
EMBL:AAFI02000012 GO:GO:0004386 eggNOG:COG1112 RefSeq:XP_644230.1
ProteinModelPortal:Q86AS0 EnsemblProtists:DDB0237968 GeneID:8619659
KEGG:ddi:DDB_G0274399 OMA:LIMISLH Uniprot:Q86AS0
Length = 967
Score = 1018 (363.4 bits), Expect = 2.3e-112, Sum P(2) = 2.3e-112
Identities = 251/641 (39%), Positives = 350/641 (54%)
Query: 142 TTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSAVEKRLFSL 201
T + VEH ++++ Y+ G +K R + L+ + ++
Sbjct: 236 TLHLIGTVEHLDNGGIKVKFYVKG---------IKGDRARQVSLLLRYEID-----WWTT 281
Query: 202 KICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIKENHNASQ 261
K+C+LST+ RE+ AL F ++ + G KIP LLH+ +N SQ
Sbjct: 282 KLCNLSTLQREFAALYQCSQSNFMKTLMMRDD--DGEDGIVMKIPPLLHDQFSSTYNDSQ 339
Query: 262 LEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPA-RVHSKGG-LRE-IKRGPE 318
L A+ L A LIQGPPGTGKT ILGL+S +LH+T +V S G L + + + E
Sbjct: 340 LNALTSALEGNAITLIQGPPGTGKTHVILGLISVLLHSTIVPKVKSGGNNLGDHLLKDRE 399
Query: 319 LPMHEKYNHWGRASPWLVGANP--RDNIMPID-----GDDGFFPTTGNELKPEXXXXXXX 371
L M EK + W + PW P RDN ID D +L+
Sbjct: 400 LSMAEKRDLWNISQPWFNKEFPHIRDNYELIDYDFEERDQKRKRDLWRKLRDTGSVKGGS 459
Query: 372 XXXXXXXCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLVE 431
CAPSN A+DEIV RL+ G+ + + R Y P +VR+G +H V SV++D++V
Sbjct: 460 TKRRILLCAPSNGAVDEIVSRLIRDGLLNADGRKYNPNLVRVGPGSHSDVESVSLDYMVR 519
Query: 432 QKRD----DSAADKQK-------HGATRKDRD--SIRSAILNEAVIVCSTLSFSGSALLS 478
++ +SA G++R +D SIR+ +L+EA IV +TLSFSG++LL+
Sbjct: 520 CRQQLMNSNSAIPSSSASTAAATSGSSRSTQDTSSIRTLVLDEADIVATTLSFSGASLLT 579
Query: 479 KLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSL 538
K+ GFD+VIIDEAAQAVE +TL+P+ GCK+V LVGDP QLPAT+ISP+A Y SL
Sbjct: 580 KMAGGFDIVIIDEAAQAVETSTLIPIQHGCKKVVLVGDPKQLPATIISPLAIKYKYDQSL 639
Query: 539 FKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPF 598
F+RLQ P ML TQYRMH +R+FPSR FY + L DG ++ T +H FGP
Sbjct: 640 FQRLQEKNSP-HMLTTQYRMHSLIRAFPSRHFYQDLLLDGPNIPSRATH-YHSNPFFGPL 697
Query: 599 SFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQ 658
F+D+ E++P G GS N E + LF +YP +S++ IISPYR QV
Sbjct: 698 VFYDLSWSTETKPGG-GSVFNEHECKMAMYLFQLFTKVYPDEDFASRIGIISPYRQQVLA 756
Query: 659 FQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRA--SDKKSIGFLADYRRMNVG 716
+E FK G+ I TVDG QGRE+++ IFSCVRA + IGFL+D RRMNV
Sbjct: 757 LREIFKNYPGIS------IDTVDGFQGREREIIIFSCVRAPVEEGAGIGFLSDVRRMNVA 810
Query: 717 ITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRVSK 757
+TR +SS+L++G L +K WN L++ + L V+K
Sbjct: 811 LTRPRSSLLILGNTKALSINKDWNELIQHTQNNQQLIPVTK 851
Score = 111 (44.1 bits), Expect = 2.3e-112, Sum P(2) = 2.3e-112
Identities = 37/121 (30%), Positives = 62/121 (51%)
Query: 14 IFRFCKIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLF 73
I RF K IL WD +D + K+ + L+ VK ++ + +DY+ T+EPLLF
Sbjct: 41 IDRFYKHILTWD----------ASDLSPKEKE-----LKPVKVSFNNEEDYITTYEPLLF 85
Query: 74 EEVKAQI---IQKKDEEEVQEWKLRLVMECGEADGFHLPS-VTYEADEVESISPNDLLLL 129
EE +AQ+ I++ ++++ E L V E + F + V E + NDL+++
Sbjct: 86 EECRAQLERSIEEGEKDDTSEPTLSRVRYISEVNDFLVVGLVMAENVNIFQFHDNDLIMI 145
Query: 130 S 130
S
Sbjct: 146 S 146
Score = 56 (24.8 bits), Expect = 1.5e-106, Sum P(2) = 1.5e-106
Identities = 18/56 (32%), Positives = 27/56 (48%)
Query: 104 DGFHLPSVTYEADEVESISPNDLLLLS-KEEFKEGSTFPTTYAFALVEHCQANLLR 158
D F+ +T++A + +SP + L K F + TTY L E C+A L R
Sbjct: 42 DRFYKHILTWDASD---LSPKEKELKPVKVSFNNEEDYITTYEPLLFEECRAQLER 94
>POMBASE|SPAC6G9.10c [details] [associations]
symbol:sen1 "ATP-dependent 5' to 3' DNA/RNA helicase
Sen1" species:4896 "Schizosaccharomyces pombe" [GO:0005524 "ATP
binding" evidence=IC] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0006364 "rRNA processing" evidence=ISO] [GO:0006369
"termination of RNA polymerase II transcription" evidence=ISO]
[GO:0008033 "tRNA processing" evidence=ISO] [GO:0008094
"DNA-dependent ATPase activity" evidence=IDA] [GO:0008186
"RNA-dependent ATPase activity" evidence=IDA] [GO:0016180 "snRNA
processing" evidence=ISO] [GO:0032575 "ATP-dependent 5'-3' RNA
helicase activity" evidence=IDA] [GO:0035649 "Nrd1 complex"
evidence=ISO] [GO:0043141 "ATP-dependent 5'-3' DNA helicase
activity" evidence=IDA] [GO:0043144 "snoRNA processing"
evidence=ISO] InterPro:IPR024714 PomBase:SPAC6G9.10c GO:GO:0005524
GO:GO:0005634 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0006397
GO:GO:0008033 eggNOG:COG1112 GO:GO:0006364 GO:GO:0006369
GO:GO:0043144 GO:GO:0043141 GO:GO:0016180 KO:K10706 GO:GO:0035649
PIR:T39072 RefSeq:NP_594119.1 ProteinModelPortal:Q92355
EnsemblFungi:SPAC6G9.10c.1 GeneID:2541556 KEGG:spo:SPAC6G9.10c
OrthoDB:EOG4BCHWF NextBio:20802652 GO:GO:0032575 InterPro:IPR024481
PANTHER:PTHR10887:SF164 Pfam:PF12726 Uniprot:Q92355
Length = 1687
Score = 651 (234.2 bits), Expect = 3.7e-87, Sum P(4) = 3.7e-87
Identities = 134/327 (40%), Positives = 203/327 (62%)
Query: 422 NSVAIDHLVEQKRDDSAADK-QKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKL 480
N + +L EQK ++ + K+ R + AIL +A +VC+TLS SG L++
Sbjct: 1309 NKINEKNLAEQKVEELQSQSFTKNKEVDLLRKKAQKAILKQADVVCATLSGSGHDLVAHS 1368
Query: 481 NHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFK 540
+ F VIIDEAAQAVE T++PL G K+ LVGDP QLP TV+S A L Y SLF
Sbjct: 1369 SLNFSTVIIDEAAQAVELDTIIPLRYGAKKCILVGDPNQLPPTVLSKKAASLNYSQSLFV 1428
Query: 541 RLQRA-GYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFS 599
R+Q+ + +L QYRMHP++ FPS++FYD LEDG ++ + T + WH F +
Sbjct: 1429 RIQKNFSNQMCLLSIQYRMHPDISHFPSKKFYDSRLEDGDNMAEKTQQVWHVNPKFTQYR 1488
Query: 600 FFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQF 659
FD+ GKE + + + S N++EV++++ + +L++ +P + + ++ +I+PYR Q+ +
Sbjct: 1489 LFDVR-GKE-RTSNTMSTYNLEEVEYLVNMVDELLNKFPDVNFTGRIGVITPYRSQLHEL 1546
Query: 660 QERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITR 719
+ FK +G +DI TVDG QG+EKD+ FSCV++ K IGFL D+RR+NV +TR
Sbjct: 1547 RRAFKVKYGKSFMSTIDIQTVDGFQGQEKDIIFFSCVKSYSKHGIGFLRDFRRLNVALTR 1606
Query: 720 AKSSILVVGCASTLREDKHWNNLVKSA 746
A+SS+L++G TL+ D W +LV A
Sbjct: 1607 ARSSLLIIGNMETLKTDDLWGSLVDDA 1633
Score = 153 (58.9 bits), Expect = 3.7e-87, Sum P(4) = 3.7e-87
Identities = 38/100 (38%), Positives = 55/100 (55%)
Query: 198 LFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIKENH 257
L+ LK+ +L+T R+Y +R + D I+ A S + S +I + Y
Sbjct: 1074 LWFLKLTNLATFTRQYAGIRGLPYFHLADDIIRARPCSQPVKHSSSEIKAAMKRY---QV 1130
Query: 258 NASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAIL 297
N Q +AI L F LIQGPPGTGKT+TI+G++SA+L
Sbjct: 1131 NEPQAKAIMCALDNNGFTLIQGPPGTGKTKTIIGIISALL 1170
Score = 101 (40.6 bits), Expect = 3.7e-87, Sum P(4) = 3.7e-87
Identities = 23/57 (40%), Positives = 37/57 (64%)
Query: 379 CAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKA--HHSVNSVAIDHLVEQK 433
CAPSN+A+DE++LRL G EN Y P++VRIG + SV +++++ E++
Sbjct: 1197 CAPSNAAVDEVLLRL-KRGFLLENGEKYIPRVVRIGNPETINVSVRDLSLEYQTEKQ 1252
Score = 60 (26.2 bits), Expect = 3.7e-87, Sum P(4) = 3.7e-87
Identities = 14/60 (23%), Positives = 31/60 (51%)
Query: 25 DYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKAQIIQKK 84
D+++ + + N + + KL ++ D++K V+ Y+ +P++F E +QI K
Sbjct: 919 DFYKEILSWEPANQSPNPVLKFHKLD-GKIIDSFKTVEHYMEVLQPMIFMECWSQIQSTK 977
Score = 46 (21.3 bits), Expect = 5.5e-72, Sum P(3) = 5.5e-72
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 233 EKSSGSQD-QSWKIPGLLHEYIK 254
EK S S++ Q W GLL +YI+
Sbjct: 12 EKLSSSKEGQHWFCSGLLTQYIQ 34
>SGD|S000004422 [details] [associations]
symbol:SEN1 "Presumed helicase and subunit of the Nrd1
complex (Nrd1p-Nab3p-Sen1p)" species:4932 "Saccharomyces
cerevisiae" [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0043144
"snoRNA processing" evidence=IEA] [GO:0008033 "tRNA processing"
evidence=IEA;IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA;IMP] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0019904 "protein
domain specific binding" evidence=IMP;IDA] [GO:0031126 "snoRNA
3'-end processing" evidence=IMP] [GO:0006378 "mRNA polyadenylation"
evidence=IMP] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IEA;IMP] [GO:0016180 "snRNA processing"
evidence=IEA;IMP] [GO:0008186 "RNA-dependent ATPase activity"
evidence=ISS] [GO:0043141 "ATP-dependent 5'-3' DNA helicase
activity" evidence=ISS] [GO:0032575 "ATP-dependent 5'-3' RNA
helicase activity" evidence=ISS] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISS] [GO:0035649 "Nrd1 complex" evidence=IDA]
[GO:0005657 "replication fork" evidence=IDA] [GO:0045005
"maintenance of fidelity involved in DNA-dependent DNA replication"
evidence=IMP] [GO:0031124 "mRNA 3'-end processing" evidence=IMP]
InterPro:IPR024714 SGD:S000004422 GO:GO:0005524 GO:GO:0005634
GO:GO:0019904 GO:GO:0006378 EMBL:BK006945 GO:GO:0008033
eggNOG:COG1112 EMBL:U20939 EMBL:U21094 GO:GO:0006364 GO:GO:0006369
GO:GO:0031126 GO:GO:0043141 KO:K00088 RefSeq:NP_013536.3
GeneID:851152 KEGG:sce:YLR432W GO:GO:0016180 KO:K10706
RefSeq:NP_013534.3 GeneID:851150 KEGG:sce:YLR430W GO:GO:0035649
GO:GO:0032575 InterPro:IPR024481 PANTHER:PTHR10887:SF164
Pfam:PF12726 EMBL:M74589 PIR:S53416 ProteinModelPortal:Q00416
SMR:Q00416 DIP:DIP-881N IntAct:Q00416 MINT:MINT-427565
STRING:Q00416 PaxDb:Q00416 PeptideAtlas:Q00416 EnsemblFungi:YLR430W
CYGD:YLR430w GeneTree:ENSGT00580000081652 HOGENOM:HOG000246755
OMA:SAIIPLR OrthoDB:EOG4MPMZ6 NextBio:967924 Genevestigator:Q00416
GermOnline:YLR430W Uniprot:Q00416
Length = 2231
Score = 627 (225.8 bits), Expect = 3.9e-85, Sum P(3) = 3.9e-85
Identities = 132/342 (38%), Positives = 201/342 (58%)
Query: 450 DRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCK 509
DR + ++ IL + I+CSTLS S +L+ + FD VIIDEA Q E ++++PL G K
Sbjct: 1550 DRRNAQAHILAVSDIICSTLSGSAHDVLATMGIKFDTVIIDEACQCTELSSIIPLRYGGK 1609
Query: 510 QVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSRE 569
+ +VGDP QLP TV+S A + Y SLF R+++ P +L QYRMHP + FPS E
Sbjct: 1610 RCIMVGDPNQLPPTVLSGAASNFKYNQSLFVRMEKNSSPY-LLDVQYRMHPSISKFPSSE 1668
Query: 570 FYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLL 629
FY L+DG ++ R WH+ P+ FFDI G++ Q A + S+ N++E+ + L
Sbjct: 1669 FYQGRLKDGPGMDILNKRPWHQLEPLAPYKFFDIISGRQEQNAKTMSYTNMEEIRVAIEL 1728
Query: 630 FHKLISMYP-QLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREK 688
L + ++ + ++ IISPYR Q+++ ++ F FG K +D T+DG QG+EK
Sbjct: 1729 VDYLFRKFDNKIDFTGKIGIISPYREQMQKMRKEFARYFGGMINKSIDFNTIDGFQGQEK 1788
Query: 689 DVAIFSCVRASD-KKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAE 747
++ + SCVRA D K S+GFL D+RRMNV +TRAK+SI V+G +L + K W +L++ A+
Sbjct: 1789 EIILISCVRADDTKSSVGFLKDFRRMNVALTRAKTSIWVLGHQRSLAKSKLWRDLIEDAK 1848
Query: 748 KQDCLFRVSKPYASFFSDENLESMRK-NATTDNVQGADGHVP 788
+ CL + ++ +RK N + Q D +P
Sbjct: 1849 DRSCLAYACSGFLDPRNNRAQSILRKFNVPVPSEQEDDYKLP 1890
Score = 199 (75.1 bits), Expect = 3.9e-85, Sum P(3) = 3.9e-85
Identities = 72/265 (27%), Positives = 124/265 (46%)
Query: 39 KNSKKVDRGKLG-LREVKDTYKDVDDYLATFEPLLFEEVKAQIIQKKDEEEVQEWKLRLV 97
+NS+ D +G +VKD + DY +PLL E + +D E+ + + + +
Sbjct: 1127 RNSEYPDDEPIGNYSDVKDFFNSPADYQKVMKPLLLLESWQGLCSSRDREDYKPFSIIVG 1186
Query: 98 MECGEADGFHL-PSVTYEADEVESISPNDLLLLSK-EEFKEGSTFPTTYAFALVEH-CQA 154
+D + + SV + + IS +DL++++ +F+ + F +H C A
Sbjct: 1187 NRTAVSDFYDVYASVAKQVIQDCGISESDLIVMAYLPDFRPDKRLSSD-DFKKAQHTCLA 1245
Query: 155 NLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSAVEKRLFSLKICSLSTIAREYL 214
+ L+ G V D + R+ HS S + ++ +K+ ++TI REY
Sbjct: 1246 KVRTLKNTKGGNV-----DV--TLRIHRNHSF--SKFLTLRSEIYCVKVMQMTTIEREYS 1296
Query: 215 ALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIKENH--NASQLEAIHEGLLRK 272
L + IL A + D + +I E +K+++ N SQ EAI + ++
Sbjct: 1297 TLEGLEYYDLVGQILQAKPSPPVNVDAA-EI-----ETVKKSYKLNTSQAEAIVNSVSKE 1350
Query: 273 AFVLIQGPPGTGKTQTILGLLSAIL 297
F LIQGPPGTGKT+TILG++ L
Sbjct: 1351 GFSLIQGPPGTGKTKTILGIIGYFL 1375
Score = 104 (41.7 bits), Expect = 3.9e-85, Sum P(3) = 3.9e-85
Identities = 27/94 (28%), Positives = 54/94 (57%)
Query: 379 CAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLK--AHHSVNSVAIDHLVEQK--- 433
CAPSN+A+DEI LRL +G+ D+ + P++VR+G + ++ + ++ LV+++
Sbjct: 1409 CAPSNAAVDEICLRL-KSGVYDKQGHQFKPQLVRVGRSDVVNVAIKDLTLEELVDKRIGE 1467
Query: 434 -----RDDSAADKQKHGATRKDRDSIRSAILNEA 462
R D +++ + A K R+ +R + +E+
Sbjct: 1468 RNYEIRTDPELERKFNNAVTKRRE-LRGKLDSES 1500
Score = 87 (35.7 bits), Expect = 2.2e-73, Sum P(3) = 2.2e-73
Identities = 45/194 (23%), Positives = 83/194 (42%)
Query: 19 KIILGWDYFRLVKESQERNDKNSKKVDRGKLG-LREVKDTYKDVDDYLATFEPLLFEEVK 77
+IIL WDY R NS+ D +G +VKD + DY +PLL E
Sbjct: 1118 EIILQWDYTR-----------NSEYPDDEPIGNYSDVKDFFNSPADYQKVMKPLLLLESW 1166
Query: 78 AQIIQKKDEEEVQEWKLRLVMECGEADGFHL-PSVTYEADEVESISPNDLLLLSK-EEFK 135
+ +D E+ + + + + +D + + SV + + IS +DL++++ +F+
Sbjct: 1167 QGLCSSRDREDYKPFSIIVGNRTAVSDFYDVYASVAKQVIQDCGISESDLIVMAYLPDFR 1226
Query: 136 EGSTFPTTYAFALVEH-CQANLLRLRMYLAGEV-----IHINKDAVKSQRLLN-IHSLIT 188
+ F +H C A + L+ G V IH N K L + I+ +
Sbjct: 1227 PDKRLSSD-DFKKAQHTCLAKVRTLKNTKGGNVDVTLRIHRNHSFSKFLTLRSEIYCVKV 1285
Query: 189 SSVSAVEKRLFSLK 202
++ +E+ +L+
Sbjct: 1286 MQMTTIEREYSTLE 1299
Score = 37 (18.1 bits), Expect = 3.8e-68, Sum P(3) = 3.8e-68
Identities = 12/41 (29%), Positives = 20/41 (48%)
Query: 45 DRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKAQIIQKKD 85
D+ K L V +T+K++ +L + +L E II D
Sbjct: 826 DQTKNLLLNVLETFKNMLYWLRLSDEVLLESCVRLIISTSD 866
>DICTYBASE|DDB_G0285243 [details] [associations]
symbol:DDB_G0285243 "putative splicing endonuclease"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
dictyBase:DDB_G0285243 EMBL:AAFI02000076 KO:K10706
InterPro:IPR024481 Pfam:PF12726 RefSeq:XP_002649136.1
ProteinModelPortal:C7G036 EnsemblProtists:DDB0252844 GeneID:8625002
KEGG:ddi:DDB_G0285243 OMA:DSINMIF Uniprot:C7G036
Length = 2069
Score = 575 (207.5 bits), Expect = 2.9e-84, Sum P(4) = 2.9e-84
Identities = 135/324 (41%), Positives = 187/324 (57%)
Query: 438 AADKQK--HGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQA 495
A D+++ H + ++ I+ + I+ STLS SG L FD+VI+DEAAQA
Sbjct: 1559 AKDEERRFHEQYSNTKRNLYINIIGRSQIILSTLSGSGYDYLFTATKNFDLVIVDEAAQA 1618
Query: 496 VEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQ 555
VE +TL+PL K+ LVGDP QLP T IS VA Y SLF+RL G +LKTQ
Sbjct: 1619 VELSTLIPLRHDVKKCILVGDPQQLPPTTISKVATKFQYEISLFQRLMNCGMAPTVLKTQ 1678
Query: 556 YRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRC--FGPFSFFDIHEGKESQPAG 613
YRMHP + FPS+ FY LEDG +V +Y +D++ FGP F+D+ + +
Sbjct: 1679 YRMHPMISKFPSKIFYRGELEDGKNVREYK-QDYYNDSASRFGPLVFYDLFDKHGEVRSS 1737
Query: 614 SGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQK 673
S N EV L+ +LIS YP K ++ +I+PY+ Q FK G ++
Sbjct: 1738 FFSLRNPTEVKLAKLIVDQLISNYPNTKDL-EIGVITPYKSQSVDLFNAFK---GYQN-- 1791
Query: 674 VVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTL 733
V+++T+DG QG+EKD IFS VRA SIGFL+D RRMNVG+TRAK S++++G +S L
Sbjct: 1792 -VEVSTIDGFQGKEKDFVIFSSVRAHSGHSIGFLSDIRRMNVGLTRAKYSMVILGNSSLL 1850
Query: 734 REDKHWNNLVKSAEK-QDCLFRVS 756
+ W NLV + +C F +S
Sbjct: 1851 SNNDDWGNLVNDLRQTNNCYFPIS 1874
Score = 192 (72.6 bits), Expect = 2.9e-84, Sum P(4) = 2.9e-84
Identities = 46/96 (47%), Positives = 60/96 (62%)
Query: 202 KICSLSTIAREYLALRSVGSLPFKDLILSASE--KSSGSQDQSWKIPGLLHEYIKENHNA 259
K+ SLSTI+REY+AL VG +P I+S S+ S ++KIP L + ++ + N
Sbjct: 1315 KVTSLSTISREYMALHMVGKIPLGTSIISPHLYINSNDSSSSTFKIPDKLFQKLRSSLNE 1374
Query: 260 SQLEAIHEGLLRKA-FVLIQGPPGTGKTQTILGLLS 294
SQL AI L F L+QGPPGTGKT+TIL LLS
Sbjct: 1375 SQLSAIASTLKNLGGFSLLQGPPGTGKTKTILSLLS 1410
Score = 126 (49.4 bits), Expect = 2.9e-84, Sum P(4) = 2.9e-84
Identities = 32/76 (42%), Positives = 47/76 (61%)
Query: 379 CAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAH-H-SVNSVAIDHLV--EQKR 434
CAPSN+A+DEI LR+ G+ D+N + P I RIG ++H H SV ++++ L+ E K
Sbjct: 1431 CAPSNAAVDEIALRIKKDGLIDKNGNKFKPVICRIGNQSHIHPSVQDISVESLILGEYKD 1490
Query: 435 DDSAA--DKQKHGATR 448
+SA + QK TR
Sbjct: 1491 KNSAIANEDQKKENTR 1506
Score = 88 (36.0 bits), Expect = 2.9e-84, Sum P(4) = 2.9e-84
Identities = 23/62 (37%), Positives = 34/62 (54%)
Query: 51 LREVKDTYKDVDDYLATFEPLLFEEVKAQIIQKKDEE-EVQEWKL-RLVMECGEAD-GFH 107
L+ V T+ D+ Y+ F+PLL EE +AQ+I+ DE Q+ + + E G D F
Sbjct: 1157 LKPVPGTFDDLKHYIDIFQPLLIEEFRAQVIRNLDEGVNFQDVTVDNFIQENGFIDVDFE 1216
Query: 108 LP 109
LP
Sbjct: 1217 LP 1218
Score = 49 (22.3 bits), Expect = 1.5e-59, Sum P(3) = 1.5e-59
Identities = 14/44 (31%), Positives = 27/44 (61%)
Query: 176 KSQRLLNIHSLITSSVSAVEKRLFSLKI--CSLSTIAREYLALR 217
K++ +L++ S+ T+ ++ +EK KI C+ S A + +ALR
Sbjct: 1401 KTKTILSLLSVFTTVLTNIEKSHSDPKILVCAPSNAAVDEIALR 1444
Score = 43 (20.2 bits), Expect = 1.4e-13, Sum P(3) = 1.4e-13
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 431 EQKRDDSAADKQKHGATRKDRDSIRS 456
++ R+D D+ R DRD RS
Sbjct: 1990 DRDRNDRGRDRSDRDRDRSDRDRDRS 2015
Score = 42 (19.8 bits), Expect = 1.8e-13, Sum P(3) = 1.8e-13
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 431 EQKRDDSAADKQKHGATRKDRDSIRS 456
++ RD S D+ + R DRD R+
Sbjct: 2009 DRDRDRSDRDRDRSDRDRNDRDRDRN 2034
Score = 39 (18.8 bits), Expect = 3.6e-13, Sum P(3) = 3.6e-13
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 431 EQKRDDSAADKQKHGATRKDRDSIR 455
++ RD S D+ R DRD R
Sbjct: 2016 DRDRDRSDRDRNDRDRDRNDRDRDR 2040
Score = 38 (18.4 bits), Expect = 4.6e-13, Sum P(3) = 4.6e-13
Identities = 9/23 (39%), Positives = 10/23 (43%)
Query: 434 RDDSAADKQKHGATRKDRDSIRS 456
R D D+ R DRD RS
Sbjct: 2000 RSDRDRDRSDRDRDRSDRDRDRS 2022
>POMBASE|SPBC29A10.10c [details] [associations]
symbol:SPBC29A10.10c "tRNA-splicing endonuclease
positive effector (predicted)" species:4896 "Schizosaccharomyces
pombe" [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0006364 "rRNA processing"
evidence=ISO] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IEA] [GO:0008033 "tRNA processing"
evidence=ISO] [GO:0016180 "snRNA processing" evidence=ISO]
[GO:0035649 "Nrd1 complex" evidence=ISO] [GO:0043144 "snoRNA
processing" evidence=ISO] InterPro:IPR024714 PomBase:SPBC29A10.10c
GO:GO:0005524 GO:GO:0005634 EMBL:CU329671 GO:GO:0008033
eggNOG:COG1112 GO:GO:0006364 GO:GO:0004004 GO:GO:0006369
GO:GO:0043144 GO:GO:0016180 KO:K10706 GO:GO:0035649
InterPro:IPR024481 PANTHER:PTHR10887:SF164 Pfam:PF12726
OrthoDB:EOG4MPMZ6 PIR:T40065 RefSeq:NP_596055.1
ProteinModelPortal:O94387 EnsemblFungi:SPBC29A10.10c.1
GeneID:2540523 KEGG:spo:SPBC29A10.10c NextBio:20801650
Uniprot:O94387
Length = 1944
Score = 637 (229.3 bits), Expect = 7.8e-84, Sum P(4) = 7.8e-84
Identities = 140/364 (38%), Positives = 220/364 (60%)
Query: 428 HLVEQKRDDSAADKQKHGATRKD--RDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFD 485
+++EQ DD ++Q+ D + I++ +L EA IVC+TLS SG LL F
Sbjct: 1453 NMLEQSLDDMR-ERQRSTNRNLDVLKKQIQNQLLQEADIVCATLSASGHELLLNAGLTFR 1511
Query: 486 VVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRL-QR 544
VIIDEAAQAVE ++++PL GC+ +VGDP QLP TV+S + GY SL+ R+ ++
Sbjct: 1512 TVIIDEAAQAVELSSIIPLKYGCESCVMVGDPNQLPPTVLSKTSAKFGYSQSLYVRMFKQ 1571
Query: 545 AGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIH 604
+L QYRM+PE+ FPS+ FY+ L DG ++ T+R WHE G + FF++H
Sbjct: 1572 HNESACLLSIQYRMNPEISRFPSKFFYNSKLLDGPNMSAVTSRPWHEDPQLGIYRFFNVH 1631
Query: 605 EGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFK 664
G E+ + S S N++E F+LLL+ +LI Y + ++ +++PYR QV+Q + +F+
Sbjct: 1632 -GTEAF-SNSKSLYNVEEASFILLLYERLIQCYLNIDFEGKIGVVTPYRSQVQQLRSQFQ 1689
Query: 665 ETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSI 724
+G K +DI TVDG QG+EKD+ IFSCVR+S IGFL D RR+NV +TRAKSS+
Sbjct: 1690 RKYGSIIFKHLDIHTVDGFQGQEKDIIIFSCVRSSMSGGIGFLQDLRRLNVALTRAKSSL 1749
Query: 725 LVVGCASTLREDKHWNNLVKSAEKQDCLFRVSKPYASFFSDENLESMRKNATTDNVQGAD 784
+VG + L ++ + +L++ A+ + +S F + +++ ++ + ++N+ A
Sbjct: 1750 YIVGNSKPLMQEDIFYSLIEDAKTRGVWRDLSAN--QFKNSKSISNVSTHLASNNLNLAS 1807
Query: 785 GHVP 788
P
Sbjct: 1808 RDTP 1811
Score = 155 (59.6 bits), Expect = 7.8e-84, Sum P(4) = 7.8e-84
Identities = 43/126 (34%), Positives = 65/126 (51%)
Query: 172 KDAVKSQRLLNIHSLITSSVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSA 231
K++++ +NI S+ A R + K+ + +T RE+ AL+S+ LP IL A
Sbjct: 1190 KESLELCLRMNIESIDLQEY-APNIRFTAQKLFNATTSLREFAALKSLRHLPLSQRILDA 1248
Query: 232 SEKSSGSQDQSWKIPGLLHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILG 291
+ S K ++ Y N Q AI+ + F LIQGPPGTGKT+TILG
Sbjct: 1249 NVTRLPSNFTDDKKQKIMKSY---GVNEPQAYAIYASSVNDGFTLIQGPPGTGKTKTILG 1305
Query: 292 LLSAIL 297
++ A+L
Sbjct: 1306 MIGAVL 1311
Score = 108 (43.1 bits), Expect = 7.8e-84, Sum P(4) = 7.8e-84
Identities = 30/90 (33%), Positives = 52/90 (57%)
Query: 379 CAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAI---DHLVEQ--- 432
CAPSN+A+DEI+LR+ G+ D + PK++R+G SV++ + +++Q
Sbjct: 1337 CAPSNAAIDEILLRI-KAGVYDHEGIKFFPKVIRVGFGDSISVHAKEFTLEEQMIKQMEL 1395
Query: 433 ---KRDDSA---AD-KQKHGATRKDRDSIR 455
K+D A +D ++K+ + K RDS+R
Sbjct: 1396 TNLKKDQEANNSSDTRKKYDSIIKKRDSLR 1425
Score = 97 (39.2 bits), Expect = 3.2e-76, Sum P(3) = 3.2e-76
Identities = 47/194 (24%), Positives = 78/194 (40%)
Query: 17 FCKIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEV 76
F K+ILGW+ + +S ++ + V + K TY D + Y F+P+LF E
Sbjct: 1062 FYKVILGWNP---LADSFSASNVEMQCV--------QAKFTYNDSNAYEKVFKPMLFHEC 1110
Query: 77 KAQIIQKKDEEEVQEWKLRLVMEC-GEADGF-HLPSVTYEADEVESISPNDLLLLSKEEF 134
AQ+ K EE Q + L++ D F + + EV +S D+ LLSK +
Sbjct: 1111 WAQV--KSAVEEKQYPPIDLILNTRSTVDNFVDIYFTSCSPTEVSFLSDTDICLLSKSQS 1168
Query: 135 KEGSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSAV 194
+ P ++ ++ L + L + I+ L ++ S
Sbjct: 1169 SGDTNNPKSFQLCKIQSISRKKESLELCLRMNIESIDLQEYAPNIRFTAQKLFNATTSLR 1228
Query: 195 E-KRLFSLKICSLS 207
E L SL+ LS
Sbjct: 1229 EFAALKSLRHLPLS 1242
Score = 38 (18.4 bits), Expect = 7.8e-84, Sum P(4) = 7.8e-84
Identities = 13/40 (32%), Positives = 25/40 (62%)
Query: 51 LREVKDTYKDVDDYLATFEPLLFEEVKAQIIQKKDEEEVQ 90
L +VK T D +++ PLL +E+++ +K++E E+Q
Sbjct: 211 LSDVK-TISD-NEFKILEGPLL-QEIRSLDQKKENENEMQ 247
>TAIR|locus:2059088 [details] [associations]
symbol:AT2G19120 "AT2G19120" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0009506 "plasmodesma" evidence=IDA] GO:GO:0009506
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0004386 GO:GO:0004519
eggNOG:COG1112 EMBL:AC002392 KO:K10706 InterPro:IPR026852
PANTHER:PTHR10887:SF27 IPI:IPI00542366 PIR:T00533
RefSeq:NP_179502.1 UniGene:At.52824 ProteinModelPortal:O64476
SMR:O64476 PaxDb:O64476 PRIDE:O64476 EnsemblPlants:AT2G19120.1
GeneID:816429 KEGG:ath:AT2G19120 TAIR:At2g19120
HOGENOM:HOG000084788 InParanoid:O64476 OMA:DWAALIS PhylomeDB:O64476
ProtClustDB:CLSN2683158 ArrayExpress:O64476 Genevestigator:O64476
Uniprot:O64476
Length = 1090
Score = 621 (223.7 bits), Expect = 2.5e-83, Sum P(4) = 2.5e-83
Identities = 132/306 (43%), Positives = 183/306 (59%)
Query: 451 RDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQ 510
R S+ ++ NEA IV +T+S SG L S+L HGFD+V+IDEAAQA E L PLA G +
Sbjct: 742 RASLEASFANEAEIVFTTVSSSGRKLFSRLTHGFDMVVIDEAAQASEVGVLPPLALGAAR 801
Query: 511 VFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREF 570
LVGDP QLPATVIS A L Y SLF+R Q AG P +L QYRMHP++R FPSR F
Sbjct: 802 CVLVGDPQQLPATVISKAAGTLLYSRSLFERFQLAGCPTLLLTVQYRMHPQIRDFPSRYF 861
Query: 571 YDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
Y L+D + +++ P+ FF+I G+ES GS S+ N+DE F + ++
Sbjct: 862 YQGRLKDSESISSAPDEIYYKDPVLRPYLFFNISHGRESHRGGSVSYENVDEARFCVGVY 921
Query: 631 HKLISMYPQLKSSS-QLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKD 689
L L + + +I+PY+ Q+K + F G + K + I TVD QG+E+D
Sbjct: 922 MHLQKTLKSLGAGKVSVGVITPYKLQLKCLKHEFGNALGQDELKEIYINTVDAFQGQERD 981
Query: 690 VAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQ 749
V I SCVRAS +GF++D RRMNV +TRA+ ++ V+G AS L + + W L+ A +
Sbjct: 982 VIIMSCVRASGH-GVGFVSDIRRMNVALTRARRALWVMGNASALMKSEDWAALISDARGR 1040
Query: 750 DCLFRV 755
+C +
Sbjct: 1041 NCFMEM 1046
Score = 103 (41.3 bits), Expect = 2.5e-83, Sum P(4) = 2.5e-83
Identities = 19/55 (34%), Positives = 35/55 (63%)
Query: 379 CAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAH-HSVNSVAIDHLVEQ 432
CAPSN+A DE++ R+L+ G D +R Y P + R+G+ + + +V+++ +Q
Sbjct: 584 CAPSNAATDELLSRVLDRGFIDGEMRVYRPDVARVGVDSQSRAAQAVSVERRSDQ 638
Score = 93 (37.8 bits), Expect = 2.5e-83, Sum P(4) = 2.5e-83
Identities = 68/249 (27%), Positives = 108/249 (43%)
Query: 51 LREVKDTYKDVDDYLATFEPLLFEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGFHLPS 110
LR V + ++ +++Y+ FEPLLFEE +AQ+ W +E EA+ +
Sbjct: 254 LRSVPERFESMEEYVRVFEPLLFEECRAQLYST--------W-----VELAEANTY--VK 298
Query: 111 VTYEADEVESISPNDLLLLS----KEEFKEGSTFPTTYAFALVEHCQANLLRLRMYLAGE 166
V ++ E D++L S K FKEG + L E + + R+ AG
Sbjct: 299 VRIKSIERRERGWYDVILNSLNGCKWAFKEGDV--AVLSTPLPESDEDHEDAGRV--AGT 354
Query: 167 VI-HINKDAVKSQRLLNIHSLITSSVSAVEKR-----LFSLK---------ICSLSTIAR 211
V HI D + R +H + +S K L LK + SL+T R
Sbjct: 355 VRRHIPVDT-RDPRGATLHFYVGNSGGTGSKIDDSHILRKLKPQDIWHLTVLGSLATTQR 413
Query: 212 EYLALRSVGSL-P-FKDLILSAS-EKSSGSQDQSWKIPGLLH----EYIKENHNASQLEA 264
EY+AL + L P ++ IL+ S E+ ++Q+ P +++ + NA QL A
Sbjct: 414 EYVALHAFSRLNPQMQNAILNPSPEQFPSYEEQTPATPDCFTTSFVDHLHRSFNAPQLAA 473
Query: 265 IHEGLLRKA 273
IH + A
Sbjct: 474 IHWAAMHTA 482
Score = 92 (37.4 bits), Expect = 2.5e-83, Sum P(4) = 2.5e-83
Identities = 23/60 (38%), Positives = 32/60 (53%)
Query: 251 EYIKENHNASQLEAIHEGLLRKA--------------FVLIQGPPGTGKTQTILGLLSAI 296
+++ + NA QL AIH + A F L+QGPPGTGKT T+ G+L+ I
Sbjct: 460 DHLHRSFNAPQLAAIHWAAMHTAAGTSSGVKKQEPWPFTLVQGPPGTGKTHTVWGMLNVI 519
>TAIR|locus:2126480 [details] [associations]
symbol:AT4G30100 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0009506 "plasmodesma"
evidence=IDA] GO:GO:0009506 EMBL:CP002687 EMBL:AL161576
GO:GO:0004519 eggNOG:COG1112 EMBL:AL078464 KO:K10706
InterPro:IPR026852 PANTHER:PTHR10887:SF27 HOGENOM:HOG000084788
ProtClustDB:CLSN2683158 IPI:IPI00535923 PIR:T08986
RefSeq:NP_194739.1 UniGene:At.31859 ProteinModelPortal:Q9SZW3
SMR:Q9SZW3 STRING:Q9SZW3 PaxDb:Q9SZW3 PRIDE:Q9SZW3
EnsemblPlants:AT4G30100.1 GeneID:829133 KEGG:ath:AT4G30100
TAIR:At4g30100 InParanoid:Q9SZW3 PhylomeDB:Q9SZW3
ArrayExpress:Q9SZW3 Genevestigator:Q9SZW3 Uniprot:Q9SZW3
Length = 1311
Score = 617 (222.3 bits), Expect = 3.3e-82, Sum P(4) = 3.3e-82
Identities = 141/331 (42%), Positives = 191/331 (57%)
Query: 429 LVEQKRDDSAADKQKHGAT---RKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFD 485
LVE R K + G + + R S+ ++ NEA IV +T+S SG L S+L HGFD
Sbjct: 880 LVEMSRLLIVEGKFRAGTSFNLEEARASLEASFANEAEIVFTTVSSSGRKLFSRLTHGFD 939
Query: 486 VVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRA 545
+V+IDEAAQA E L PLA G + LVGDP QLPATVIS A L Y SLF+R Q A
Sbjct: 940 MVVIDEAAQASEVGVLPPLALGAARCVLVGDPQQLPATVISKAAGTLLYSRSLFERFQLA 999
Query: 546 GYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHE 605
G P +L QYRMHP++R FPSR FY L D V +++ P+ FFDI
Sbjct: 1000 GCPTLLLTVQYRMHPQIRDFPSRYFYQGRLTDSESVSTAPDEIYYKDSVLKPYLFFDISH 1059
Query: 606 GKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSS-QLAIISPYRHQVKQFQERFK 664
G+ES GS S+ NIDE F + ++ L L + +I+PY+ Q+K + F
Sbjct: 1060 GRESHRGGSVSYENIDEARFCVGVYLHLQRTLKSLGGGKVSVGVITPYKLQLKCLKIEFG 1119
Query: 665 ETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSI 724
+ + + I TVD QG+E+DV I SCVRAS+ +GF+AD RRMNV +TRAK ++
Sbjct: 1120 NALSQDELQEIYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRAKRAL 1178
Query: 725 LVVGCASTLREDKHWNNLVKSAEKQDCLFRV 755
V+G AS L + + W L+ A+ ++C +
Sbjct: 1179 WVMGNASALMKCEDWAALITDAKARNCFMEM 1209
Score = 102 (41.0 bits), Expect = 3.3e-82, Sum P(4) = 3.3e-82
Identities = 58/237 (24%), Positives = 104/237 (43%)
Query: 51 LREVKDTYKDVDDYLATFEPLLFEEVKAQIIQKKDE-EEVQEW-KLRL-VMECGEADGFH 107
L+ V + ++ +D+Y+ FEPLLFEE +AQ+ +E E + K+R+ +E E +
Sbjct: 418 LQSVPERFESMDEYVRVFEPLLFEECRAQLYSTWEELAEANSYMKVRIKFIERRERGWYD 477
Query: 108 LPSVTYEADEVE-SISPNDLLLLSKE-EFKEGSTFPTTYAFALVEHCQANLLRLRMYLAG 165
+ + +E + + D+ +LS EG V R G
Sbjct: 478 V--ILNSVNECKWAFKEGDVAVLSNPVPESEGEHDDVGRVAGTVRRYIPVDTRDPH---G 532
Query: 166 EVIHINK-DAVKSQRLLNIHSLITSSVSAVEKRLFSLKIC-SLSTIAREYLALRSVGSL- 222
++H DA S ++ + ++ K ++ L + S++T REY+AL + L
Sbjct: 533 AILHFYVGDAYDSGSKIDDNHILRK---LKPKEIWHLTVLGSIATTQREYVALHAFSQLN 589
Query: 223 P-FKDLILSAS-EKSSGSQDQSWKIPGLLHE----YIKENHNASQLEAIHEGLLRKA 273
P ++ IL S E+ +Q+ +P ++ + NA QL AIH + A
Sbjct: 590 PQMQNAILKPSPEQFPNYGEQTPTVPDCFTPSFAGHLHRSFNAPQLAAIHWAAMHTA 646
Score = 98 (39.6 bits), Expect = 3.3e-82, Sum P(4) = 3.3e-82
Identities = 18/50 (36%), Positives = 32/50 (64%)
Query: 379 CAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAH-HSVNSVAID 427
CAPSN+A DE++ R+L+ G D +R Y P + R+G+ + +V+++
Sbjct: 747 CAPSNAATDELLSRVLDRGFIDGEMRVYRPDVARVGVDTQTKAAQAVSVE 796
Score = 92 (37.4 bits), Expect = 3.3e-82, Sum P(4) = 3.3e-82
Identities = 24/59 (40%), Positives = 33/59 (55%)
Query: 252 YIKENHNASQLEAIH-----------EGLLRK---AFVLIQGPPGTGKTQTILGLLSAI 296
++ + NA QL AIH G+ R+ F L+QGPPGTGKT T+ G+L+ I
Sbjct: 625 HLHRSFNAPQLAAIHWAAMHTAAGTSSGVKRQDPWPFTLVQGPPGTGKTHTVWGMLNVI 683
Score = 41 (19.5 bits), Expect = 5.2e-05, Sum P(3) = 5.2e-05
Identities = 16/80 (20%), Positives = 38/80 (47%)
Query: 406 YTPKIVRIGLKAHHSVNSVAIDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIV 465
YT + ++ +++ VN + D++V D+ + ++ R ++ ++V
Sbjct: 692 YTSLLKKLAPESYKQVNESSSDNIVSGSIDEVLQNMDQN-LFR----TLPKLCAKPRMLV 746
Query: 466 CSTLSFSGSALLSK-LNHGF 484
C+ + + LLS+ L+ GF
Sbjct: 747 CAPSNAATDELLSRVLDRGF 766
>UNIPROTKB|G4NIZ8 [details] [associations]
symbol:MGG_02784 "DNA-binding protein SMUBP-2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR024714 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0008033 GO:GO:0004386 EMBL:CM001237
GO:GO:0006364 GO:GO:0006369 GO:GO:0043144 GO:GO:0016180 KO:K10706
InterPro:IPR024481 PANTHER:PTHR10887:SF164 Pfam:PF12726
RefSeq:XP_003720957.1 EnsemblFungi:MGG_02784T0 GeneID:2682672
KEGG:mgr:MGG_02784 Uniprot:G4NIZ8
Length = 2037
Score = 623 (224.4 bits), Expect = 1.9e-81, Sum P(3) = 1.9e-81
Identities = 128/320 (40%), Positives = 199/320 (62%)
Query: 434 RDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAA 493
RD ++ + A K R+ I+ +IL+EA ++C+TLS +G + L F+ VIIDEAA
Sbjct: 1525 RDKASGNTYAREAEIKRRN-IQQSILSEAHVLCATLSGAGHDMFKSLQVEFETVIIDEAA 1583
Query: 494 QAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYP--VKM 551
Q VE + L+PL G + LVGDP QLP TV+S A GY SLF R+Q+ +P V +
Sbjct: 1584 QCVELSALIPLKYGASKCILVGDPKQLPPTVLSQSAARYGYDQSLFVRMQQ-NHPGKVHL 1642
Query: 552 LKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQP 611
L QYRMHPE+ +PS+EFY+ L DGSD+ + WH+ GP+ FFD+ EG + +
Sbjct: 1643 LDCQYRMHPEISLYPSKEFYEGLLADGSDMAKLRQQPWHDNPLLGPYRFFDV-EGIQERG 1701
Query: 612 AGSGSWINIDEVDFVLLLFHKLISMYPQ-LKSSSQLAIISPYRHQVKQFQERFKETFGVE 670
+ S +N +E++ + ++ K + Y + ++ II+PY+ Q+ +++F+E +G
Sbjct: 1702 SRGQSLVNTNEINVAIQIYTKFQADYASSIDMKGKIGIITPYKAQLFALRQKFQERWGEG 1761
Query: 671 SQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCA 730
+ ++ T D QGRE ++ IFSCVRAS IGF+ D RRMNVG+TRA+SS+ ++G +
Sbjct: 1762 VLEDIEFNTTDAFQGRECEIIIFSCVRASPTGGIGFMTDIRRMNVGLTRARSSLWILGDS 1821
Query: 731 STLREDKHWNNLVKSAEKQD 750
LR+ + WN L++ ++ +D
Sbjct: 1822 RALRQGEFWNKLIEDSKARD 1841
Score = 155 (59.6 bits), Expect = 1.9e-81, Sum P(3) = 1.9e-81
Identities = 70/267 (26%), Positives = 109/267 (40%)
Query: 52 REVKDTYKDVDDYLATFEPLLFEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGFHLPSV 111
+EV +Y + DY TF P+L E + KDE + + +++ D F L
Sbjct: 1137 KEVAKSYTNPVDYRETFFPMLVNEAWRSFVTSKDESTAKPFDIKITTRTS-VDKF-LEVA 1194
Query: 112 TYEADEVESISPNDLLLLSKEEFKEGSTFPTTYAFALVEHCQANLLRL-RMYLAGEVIHI 170
T + + + D LS + ST + HC A + + R EV +
Sbjct: 1195 T--SMPISANKDKDRDRLSDGDIVLFSTAQDPLSSKESPHCLARVFKTGRKRGVLEVTY- 1251
Query: 171 NKDAVKSQRLLNIHSLITSSVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILS 230
+ + R + H L + L L+I +++T+ RE+ AL S+ +L
Sbjct: 1252 RITSKGNSRFASDHLLPGND-------LRGLRITNMTTVEREFAALESLQYYDLMTEVLD 1304
Query: 231 ASEKSSGSQDQSWKIPGLLHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTIL 290
A E S + +I Y N Q AI F L+QGPPGTGKT+TI+
Sbjct: 1305 A-EPSPILNFSNDRIQSYQDNY---QLNRGQAAAIINAKENDGFTLVQGPPGTGKTKTII 1360
Query: 291 GLLSAIL-----HATPARVHSKGGLRE 312
++ A+L A P R+ G E
Sbjct: 1361 AMVGALLTGKISRAPPTRIKPANGADE 1387
Score = 115 (45.5 bits), Expect = 1.9e-81, Sum P(3) = 1.9e-81
Identities = 25/59 (42%), Positives = 39/59 (66%)
Query: 379 CAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLK--AHHSVNSVAIDHLVEQKRD 435
CAPSN+A+DE+VLRL GI+D N ++ ++R+G + +V V +D LV++K D
Sbjct: 1396 CAPSNAAVDELVLRL-KAGIKDTNGNTHKINVLRLGRSDAINAAVRDVTLDELVKEKMD 1453
>CGD|CAL0003335 [details] [associations]
symbol:SEN1 species:5476 "Candida albicans" [GO:0035649 "Nrd1
complex" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=IEA]
[GO:0016180 "snRNA processing" evidence=IEA] [GO:0031126 "snoRNA
3'-end processing" evidence=IEA] [GO:0006369 "termination of RNA
polymerase II transcription" evidence=IEA] [GO:0006378 "mRNA
polyadenylation" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0008033 "tRNA processing" evidence=IEA]
InterPro:IPR014016 InterPro:IPR024714 PROSITE:PS51198
CGD:CAL0003335 GO:GO:0005524 GO:GO:0005634 GO:GO:0008033
GO:GO:0004386 eggNOG:COG1112 EMBL:AACQ01000003 EMBL:AACQ01000004
GO:GO:0006364 GO:GO:0006369 GO:GO:0043144 GO:GO:0016180 KO:K10706
InterPro:IPR024481 PANTHER:PTHR10887:SF164 Pfam:PF12726
RefSeq:XP_723003.1 RefSeq:XP_723150.1 ProteinModelPortal:Q5ANG6
STRING:Q5ANG6 GeneID:3635255 GeneID:3635333 KEGG:cal:CaO19.13359
KEGG:cal:CaO19.5938 Uniprot:Q5ANG6
Length = 2018
Score = 663 (238.4 bits), Expect = 1.3e-78, Sum P(2) = 1.3e-78
Identities = 155/396 (39%), Positives = 226/396 (57%)
Query: 387 DEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQKRDDSAADKQKHGA 446
DE+ RL + ++ I KI I K S L EQ+ S A++ K
Sbjct: 1447 DELRKRLATESLEEKEITELEEKIRAINKK-----RSELAKKLDEQREKASIANRTKE-- 1499
Query: 447 TRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLAT 506
+R +I++ IL+EA ++CSTLS S L++ L+ FD VIIDEA Q +E + ++PL
Sbjct: 1500 --INRRNIQARILSEAQVLCSTLSGSAHDLVANLSVQFDQVIIDEACQCLELSAIIPLRY 1557
Query: 507 GCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYP--VKMLKTQYRMHPEVRS 564
GCK+ +VGDP QLP TV+S A Y SLF R+Q+ +P V ML QYRMHP +
Sbjct: 1558 GCKKCIMVGDPNQLPPTVLSQAAASYNYEQSLFVRMQK-NHPDSVYMLDVQYRMHPMISK 1616
Query: 565 FPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVD 624
FPS EFY+ L+DG + + TR WH+ P+ FFDI GK + + S N DE
Sbjct: 1617 FPSSEFYNSKLKDGDGMLELNTRPWHKDPPLTPYRFFDIL-GKHEKNELTRSLFNTDEAI 1675
Query: 625 FVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQ 684
L L KL+ + PQ K S ++ IISPY+ Q+++ +E F +G +D TVDG Q
Sbjct: 1676 VALQLTDKLMQLLPQDKFSGKIGIISPYKEQIRKIKEVFVRKYGKPILDEIDFNTVDGFQ 1735
Query: 685 GREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVK 744
G+EK++ I SCVRAS ++GFL+D RRMNV +TRAK+++ ++G +L ++ W L+
Sbjct: 1736 GQEKEIIIMSCVRASATGNVGFLSDVRRMNVALTRAKTTLWILGNKDSLSRNEVWKKLLT 1795
Query: 745 SAEKQDCLFRVSKPYASFFSDENLESMRKNATTDNV 780
A +++C +++ Y F + N S K +NV
Sbjct: 1796 DAGERNC---ITQAYPGFLNPSNPNSGLKRKE-ENV 1827
Score = 175 (66.7 bits), Expect = 1.3e-78, Sum P(2) = 1.3e-78
Identities = 74/262 (28%), Positives = 121/262 (46%)
Query: 40 NSKK--VDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKAQIIQKKDEEEVQEWKLRLV 97
NSK + K +E+KDTYKDV DY+ EPLL E + K + + ++L L+
Sbjct: 1088 NSKSDFPSKDKSIYQEIKDTYKDVKDYVQVTEPLLMLECWQAMQSAKLTVDEKPFEL-LI 1146
Query: 98 MECGEADGFHLPSVTYEADEVES--ISPNDLLLLS-KEEFKEGSTFPTTYAFAL-VEHCQ 153
DGF + E ++ I +DL++L+ K+E + ++ Y A C
Sbjct: 1147 GSRTSVDGFFDVFASMEKTVLQDRKIGDSDLVVLALKDESLQHASDIRRYIKADGTMTCL 1206
Query: 154 ANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSAVEKRLFSLKICSLSTIAREY 213
A + + Y + + S ++ +L SV + +K+ + TI RE+
Sbjct: 1207 AKVQDTK-YTNSDYCDVVLRVYPSGPMMG--ALTPKSV------VTGMKVMQMVTIEREF 1257
Query: 214 LALRSVGSLPFKDLILSASEKS--SGSQDQSWKIPGLLHEYIKENHNASQLEAIHEGLLR 271
+L+ + D I+SA+ ++ + K+ + H N SQ AI
Sbjct: 1258 SSLKGLQYYDLADSIISATPNKPIEIEEEDAKKMRKIYHV------NDSQARAIMGTFKS 1311
Query: 272 KAFVLIQGPPGTGKTQTILGLL 293
+ F LIQGPPGTGKT+TILG++
Sbjct: 1312 EGFSLIQGPPGTGKTKTILGIV 1333
Score = 108 (43.1 bits), Expect = 1.6e-14, Sum P(2) = 1.6e-14
Identities = 29/94 (30%), Positives = 53/94 (56%)
Query: 379 CAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLK--AHHSVNSVAIDHLVEQ---- 432
CAPSN+A+DE+VLRL + G+R+ + K+VR+G + SV + ++ LV++
Sbjct: 1366 CAPSNAAVDELVLRLRD-GVRNSSGEHMPLKVVRLGRSDAINSSVRDLTLEELVDKELQT 1424
Query: 433 KRDDSAAD---KQKHGATRKDRDSIRSAILNEAV 463
K+ + D + +H +RD +R + E++
Sbjct: 1425 KQTEVVIDPNIRLEHTKCINERDELRKRLATESL 1458
Score = 49 (22.3 bits), Expect = 2.5e-65, Sum P(2) = 2.5e-65
Identities = 15/27 (55%), Positives = 19/27 (70%)
Query: 219 VGSLPF-KDLILSASEKSSGSQDQSWK 244
+G+ F K LILSASEKSS D S++
Sbjct: 364 LGNPEFSKQLILSASEKSS-MNDYSFQ 389
>DICTYBASE|DDB_G0268660 [details] [associations]
symbol:DDB_G0268660 "DNA2/NAM7 helicase family
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR003593 SMART:SM00382 dictyBase:DDB_G0268660
Pfam:PF03828 GO:GO:0005524 EMBL:AAFI02000004 GO:GO:0004386
eggNOG:COG1112 InterPro:IPR014001 SMART:SM00487 InterPro:IPR002058
ProtClustDB:CLSZ2429765 RefSeq:XP_646847.2
ProteinModelPortal:Q55F23 EnsemblProtists:DDB0304625 GeneID:8616530
KEGG:ddi:DDB_G0268660 InParanoid:Q55F23 Uniprot:Q55F23
Length = 2314
Score = 538 (194.4 bits), Expect = 1.0e-64, Sum P(3) = 1.0e-64
Identities = 127/347 (36%), Positives = 194/347 (55%)
Query: 455 RSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATG-CKQVFL 513
R I+ A IV STLS SGS + + N ++V++DE+ Q+ EPA+L+PL G +++ L
Sbjct: 1503 RKEIIRNANIVFSTLSASGSGSV-RSNFKANIVLVDESTQSSEPASLIPLCIGNIEKLIL 1561
Query: 514 VGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDE 573
VGDP+QLP T+ S + G SLF+RL + PV+ML TQYRMHP + FPS +FY +
Sbjct: 1562 VGDPLQLPPTIFSSGSAENGLNISLFERLSKV-LPVEMLNTQYRMHPTISRFPSNQFYKD 1620
Query: 574 ALEDGSDVED--YTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFH 631
L DG +V+ Y ++H +GP F+D+ + KE +G S N E+ V L
Sbjct: 1621 RLLDGDNVKSLVYNQHNFHSDIKYGPIRFYDVIDSKEE--SGKRSLKNKLEITMVFTLIK 1678
Query: 632 KLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVA 691
KL+ YP+ K S II+PY+ Q + +E+ K+ F ++ +T+DG QG EKD+
Sbjct: 1679 KLVQDYPECKKFS-FGIITPYKLQKSEIKEQHKQ-FNYPLN--IETSTIDGVQGSEKDII 1734
Query: 692 IFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDC 751
I SCVR+ + IGFL+D RR+NV +TRAK + V+G + L++D+ W + +
Sbjct: 1735 ILSCVRS---ERIGFLSDRRRINVALTRAKFGLFVIGNSKLLKKDRTWGPFCQYVHSINS 1791
Query: 752 LFRVSKPYASFFSDE--NLESMRKNAT----TDNVQGADGHVPHDDE 792
+ + S + +S+ N +D+ DG +DE
Sbjct: 1792 MVSIDSKGISVLEQQIQEYDSLNPNGLIEFHSDSEDEYDGKDEEEDE 1838
Score = 177 (67.4 bits), Expect = 1.0e-64, Sum P(3) = 1.0e-64
Identities = 76/271 (28%), Positives = 119/271 (43%)
Query: 51 LREVKDTYKDVDDYLATFEPLLFEEVKAQIIQKKDEEE---VQEWKLRLV----MECGEA 103
+ ++D+Y D +++ +PL+ EE +AQ+ DE E + E L+ ++ +
Sbjct: 1177 IHSLQDSYSDQSEFVNLMKPLIVEEYRAQLEGDFDEIEGISISEQDGTLIGLDRVKMNDT 1236
Query: 104 DGFHL--------PSVTYEA---DEVESISPNDLLLLSKEEFKEGSTFPTTYAFALVEHC 152
H +T+ DE+E I ND+LL + F T +A +LV
Sbjct: 1237 PTIHSFQELSEDSVEITFNIKVKDELEEIYLNDILLF--KAFDH--TNKPMFALSLVTR- 1291
Query: 153 QANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSAVEKRLFSLKICSLSTIARE 212
+ L + + E + D+ K + +S+ +S + L +K+ + +T RE
Sbjct: 1292 SSELKSKKQKIICEFVL--SDSTKPL-IEKFYSVSLNSKRYSKDILHFIKVSNSTTFIRE 1348
Query: 213 YLALRSV-GSLPFKDLILSAS-EKSSGSQDQSWKIPGLLHEYIKENHNASQLEAIHEGLL 270
A S + IL S E + +IP LL + NASQ AI L
Sbjct: 1349 LEATEEFKNSKTLLNQILQPSLEVYNLMTSMRMEIPSLLRSICIQELNASQFNAIETSLS 1408
Query: 271 RKAFVLIQGPPGTGKTQTILGLLSAILHATP 301
+K LIQGPPGTGKT TI LLS +L P
Sbjct: 1409 KKGITLIQGPPGTGKTTTIYYLLSILLAINP 1439
Score = 72 (30.4 bits), Expect = 1.0e-64, Sum P(3) = 1.0e-64
Identities = 13/36 (36%), Positives = 23/36 (63%)
Query: 379 CAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIG 414
C PS++++DE+ R L + + + + Y P +VRIG
Sbjct: 1446 CGPSHASVDEVAKRCLKKSLINVDGKPYLPNMVRIG 1481
Score = 62 (26.9 bits), Expect = 1.1e-52, Sum P(3) = 1.1e-52
Identities = 33/115 (28%), Positives = 57/115 (49%)
Query: 135 KEGSTF--PTTYAFALVE-HCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSV 191
K TF + AF L+ H Q +++ ++ + I I+ + + Q LNI S T V
Sbjct: 746 KNSPTFLDSRSEAFNLLNTHHQRFCIKVEAFIDQKSIDIS-NYIPEQVKLNIKSKKTEYV 804
Query: 192 SAVEKRLFSLKIC-------SLSTIAREYLA-LRSVGSLPFKDLILSASEKSSGS 238
VE LF L + ++ T+ + ++ ++S+ L +KDL LS S+K S +
Sbjct: 805 MNVE--LFKLPLGHKNESDNTIGTLIKSFIIHIKSL-VLDYKDLSLSNSQKISNT 856
Score = 59 (25.8 bits), Expect = 2.3e-52, Sum P(3) = 2.3e-52
Identities = 25/98 (25%), Positives = 51/98 (52%)
Query: 180 LLNIHSLITSSVSAVEKRLFSL------KICSLSTIAREY----LALRSVGSLPFKDLIL 229
L NI ++I + S +EK++FSL K ++ ++ +Y L + S+ S+ KD++L
Sbjct: 622 LSNIPTVILKTPSNIEKQIFSLFNTFFNKPEAIDSLKNQYPTFNLQIDSIKSM-VKDIVL 680
Query: 230 SASEKSSGSQDQSWKIPGLLHEYIKENHNASQLEAIHE 267
+K+ + + K + + +K + N S+ I+E
Sbjct: 681 PFKKKTESYRIGTSKD---IRKLLKSSVNPSKFNEINE 715
Score = 37 (18.1 bits), Expect = 1.3e-09, Sum P(3) = 1.3e-09
Identities = 12/49 (24%), Positives = 20/49 (40%)
Query: 509 KQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYR 557
K+ + G PV+ V+ P +S+ K QR M++ R
Sbjct: 2243 KRSTIKGTPVKGHIIVLDPFINDRNLASSIKKTYQRVLMEFTMMEYSLR 2291
>DICTYBASE|DDB_G0268924 [details] [associations]
symbol:DDB_G0268924 "Helicase SEN1" species:44689
"Dictyostelium discoideum" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 SMART:SM00382 dictyBase:DDB_G0268924
GO:GO:0005524 EMBL:AAFI02000004 GO:GO:0017111 eggNOG:COG1112
ProtClustDB:CLSZ2429765 RefSeq:XP_646844.2
ProteinModelPortal:Q55F26 EnsemblProtists:DDB0202279 GeneID:8616527
KEGG:ddi:DDB_G0268924 InParanoid:Q55F26 Uniprot:Q55F26
Length = 1772
Score = 523 (189.2 bits), Expect = 3.7e-64, Sum P(4) = 3.7e-64
Identities = 116/288 (40%), Positives = 175/288 (60%)
Query: 455 RSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATG-CKQVFL 513
+S + A IV STLS SGS + K N D++++DE+ Q+ EP++++PL G +++ L
Sbjct: 1351 KSDSIYRASIVFSTLSGSGSETV-KNNFRADIILVDESTQSTEPSSIIPLCIGNIEKLIL 1409
Query: 514 VGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDE 573
VGDP+QLP T+ S + G SLF+RL + PV+ML QYRMHP + FPS +FY +
Sbjct: 1410 VGDPLQLPPTIFSTESAENGLNISLFERLSKV-LPVEMLHVQYRMHPTISRFPSNQFYRD 1468
Query: 574 ALEDGSDVED--YTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFH 631
L DG +V+ Y ++H +GP F+D+ + KE +G S N E+ V L
Sbjct: 1469 RLLDGDNVKSLVYNQHNFHSDIKYGPIRFYDVIDSKEE--SGKRSLKNKLEITMVFTLIK 1526
Query: 632 KLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVA 691
KL+ YP+ K S II+PY+ Q + +E+ K+ F ++ +T+DG QG EKD+
Sbjct: 1527 KLVQDYPECKKFS-FGIITPYKLQKSEIKEQHKQ-FNYPLN--IETSTIDGFQGSEKDII 1582
Query: 692 IFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHW 739
I SCVR+ + IGFL+D RR+NV +TRAK + V+G + L++D+ W
Sbjct: 1583 ILSCVRS---ERIGFLSDRRRINVALTRAKFGLFVIGNSKLLKKDRTW 1627
Score = 152 (58.6 bits), Expect = 3.7e-64, Sum P(4) = 3.7e-64
Identities = 44/122 (36%), Positives = 59/122 (48%)
Query: 184 HSLITSSVSAVEKRLFSLKICSLSTIAREYLAL---RSVGSLPFKDLILSASEKSSGS-Q 239
H + ++++L+ +K+ + T RE A+ R+ G L F D IL S K
Sbjct: 1168 HKNYLKDSNTIKEKLYFIKVSNCITFIRELNAIKDFRNSGIL-F-DQILQPSRKDHDILS 1225
Query: 240 DQSWKIPGLLHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHA 299
+ IP LL + N SQ +I L K LIQGPPGTGKT TI LLS +L
Sbjct: 1226 SKRMAIPSLLRSMCIQELNTSQFNSIETSLSTKGITLIQGPPGTGKTTTIYYLLSILLAI 1285
Query: 300 TP 301
P
Sbjct: 1286 NP 1287
Score = 79 (32.9 bits), Expect = 3.7e-64, Sum P(4) = 3.7e-64
Identities = 19/61 (31%), Positives = 36/61 (59%)
Query: 379 CAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHS--VNSVAIDHLVEQKRDD 436
C PS++++DEI R + + + Y P +VRIG K + S +S++I + ++++ D
Sbjct: 1294 CGPSHASVDEIAKRCSKKKLIGLDGKPYLPNMVRIGKKENISPDCHSISIFNKTQREKSD 1353
Query: 437 S 437
S
Sbjct: 1354 S 1354
Score = 67 (28.6 bits), Expect = 3.7e-64, Sum P(4) = 3.7e-64
Identities = 12/38 (31%), Positives = 24/38 (63%)
Query: 51 LREVKDTYKDVDDYLATFEPLLFEEVKAQIIQKKDEEE 88
+R +K +Y + ++Y+ +PL+ EE + Q+ + DE E
Sbjct: 1018 IRNLKSSYSNHEEYMDLMKPLIVEEYRKQLAGEFDEIE 1055
Score = 39 (18.8 bits), Expect = 3.0e-61, Sum P(4) = 3.0e-61
Identities = 6/19 (31%), Positives = 13/19 (68%)
Query: 56 DTYKDVDDYLATFEPLLFE 74
D+ +D+++Y TF+ + E
Sbjct: 309 DSLEDIENYFPTFQSKIQE 327
>DICTYBASE|DDB_G0289529 [details] [associations]
symbol:DDB_G0289529 species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016779 "nucleotidyltransferase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR002934
InterPro:IPR003593 Pfam:PF01909 SMART:SM00382
dictyBase:DDB_G0289529 GO:GO:0005524 EMBL:AAFI02000141
GO:GO:0017111 eggNOG:COG1112 GO:GO:0016779 RefSeq:XP_636183.1
ProteinModelPortal:Q54HF4 EnsemblProtists:DDB0219440 GeneID:8627170
KEGG:ddi:DDB_G0289529 InParanoid:Q54HF4 ProtClustDB:CLSZ2429765
Uniprot:Q54HF4
Length = 1677
Score = 548 (198.0 bits), Expect = 8.0e-64, Sum P(3) = 8.0e-64
Identities = 134/366 (36%), Positives = 209/366 (57%)
Query: 433 KRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEA 492
+++ + + QK K+ S R ++ A IV STL+ SGS + + N D+V+IDE+
Sbjct: 1279 RKEKISPECQKISLKNKN-SSRRINLIKSASIVFSTLAGSGSKAIFE-NFSPDIVLIDES 1336
Query: 493 AQAVEPATLVPLATGC-KQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKM 551
Q+ EP +++PL+ G K++ LVGDPVQLP T+ S G SLF+RL ++ V+
Sbjct: 1337 TQSSEPTSIIPLSLGSVKKLILVGDPVQLPPTIFSKQGADCGLKISLFERLAKS-IDVQF 1395
Query: 552 LKTQYRMHPEVRSFPSREFYDEALEDGSDV--EDYTTRDWHEYRCFGPFSFFDIHEGKES 609
L TQYRMHP F S EFY+ L+DG +V + Y +H FGP FFD+ K +
Sbjct: 1396 LNTQYRMHPVTSKFISEEFYNGTLKDGENVSIDSYNNCKFHFDPSFGPMKFFDLP--KSN 1453
Query: 610 QPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGV 669
Q S +N DE+D V L +LI YP+ K S II+PY+ Q+ Q +E+ +
Sbjct: 1454 QKVIKKSIMNQDEIDKVFTLIKELIEKYPECKKLS-FGIITPYKLQMNQIKEQLNRS--- 1509
Query: 670 ESQKV-VDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVG 728
E + + ++T+DG QG EKD+ I SCVR+ +K IGFL+D RR+NV +TRAK + V+G
Sbjct: 1510 EHHNLNISVSTIDGVQGSEKDIIIMSCVRSIEKFGIGFLSDRRRINVALTRAKLGLYVIG 1569
Query: 729 CASTLREDKHWNN-LVKSAEKQDCLFRVSKPYASFFSDENLESMRKNATTDNVQGADGHV 787
L +D W L+ + D +++ ++ ++ + +S++ N+ DN D H
Sbjct: 1570 TYKVLAKDNTWEKFLIHTTIDFDHIYKSNQ-----INNNSNQSIQ-NSDQDN--NKDNHD 1621
Query: 788 PHDDET 793
++D++
Sbjct: 1622 DNNDDS 1627
Score = 160 (61.4 bits), Expect = 8.0e-64, Sum P(3) = 8.0e-64
Identities = 76/267 (28%), Positives = 118/267 (44%)
Query: 50 GLREVKDTYKDVDDYLATFEPLLFEEVKAQI---------IQK-KDE--EEVQEWKLRLV 97
G+ E+ D Y +Y +PL+F++ +AQ+ I KD E + K+
Sbjct: 985 GIGELSDNYTGEKEYQIVNKPLIFDDFRAQVENGINALNGINSAKDGTFEGFDKIKMNEA 1044
Query: 98 MECGEADGFHLPSVTYEA------DEVESISPNDLLLLSKEEFKEGSTFPTTYAFALVEH 151
+E + +T E +++E IS D+LL FK T + F +V
Sbjct: 1045 IEVVQISR-QTKFITVELIIHGNRNKLEEISVGDILL-----FKVIGLDGTKFTFGIVRK 1098
Query: 152 CQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSAVEKRLFSLKICSLSTIAR 211
+NL++ ++ V D + S H S S+ + + KI + T R
Sbjct: 1099 T-SNLMQGSLHQQSIVC----DLLYSNPT---HFFTKSLNSSTQSSIHYNKISNSVTFIR 1150
Query: 212 EYLALRSVGSLPF-KDLILSASEKSSGSQDQSWKIPGLLHEYIKENHNASQLEAIHEGLL 270
+++ + PF K+LI + ++ +Q + K P L KE N SQL AI L+
Sbjct: 1151 ---SIQEFKASPFIKNLIFNPGCNNNLNQ-KMMKFPPTLETICKEKLNESQLNAIKSSLV 1206
Query: 271 RKAFVLIQGPPGTGKTQTILGLLSAIL 297
LIQGPPGTGKT TI LLS +L
Sbjct: 1207 ESGITLIQGPPGTGKTTTINYLLSVLL 1233
Score = 61 (26.5 bits), Expect = 8.0e-64, Sum P(3) = 8.0e-64
Identities = 12/38 (31%), Positives = 22/38 (57%)
Query: 379 CAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLK 416
C PS++++DE+ R L + + + + P +VR G K
Sbjct: 1244 CGPSHASVDEVAKRCLKNLLNSDG-QIFKPNMVRTGRK 1280
Score = 38 (18.4 bits), Expect = 2.8e-07, Sum P(3) = 2.8e-07
Identities = 6/14 (42%), Positives = 10/14 (71%)
Query: 569 EFYDEALEDGSDVE 582
+FYDE +++ D E
Sbjct: 1648 DFYDEEMDNNDDDE 1661
>DICTYBASE|DDB_G0268914 [details] [associations]
symbol:DDB_G0268914 species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR003593
SMART:SM00382 dictyBase:DDB_G0268914 GO:GO:0005524
EMBL:AAFI02000004 GO:GO:0017111 eggNOG:COG1112 RefSeq:XP_647058.1
ProteinModelPortal:Q55EG2 EnsemblProtists:DDB0190122 GeneID:8616757
KEGG:ddi:DDB_G0268914 InParanoid:Q55EG2 OMA:ANCRVEN Uniprot:Q55EG2
Length = 4540
Score = 539 (194.8 bits), Expect = 4.5e-63, Sum P(3) = 4.5e-63
Identities = 133/344 (38%), Positives = 195/344 (56%)
Query: 455 RSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCK---QV 511
+ IL + I STLS SGS L+ + +VVI+DEA Q+ E + ++PL+ G K ++
Sbjct: 3665 KKMILEHSSICFSTLSASGSNLVQS-SFKPNVVIVDEATQSCETSCIIPLSLGAKSMKKL 3723
Query: 512 FLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFY 571
LVGDPVQLP T+ S + H G G SLF+RL + PV ML QYRMHP + FPS +FY
Sbjct: 3724 ILVGDPVQLPPTIFSKESIHCGLGISLFERLSKV-LPVSMLNVQYRMHPLISKFPSSQFY 3782
Query: 572 DEALEDGSDV---EDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLL 628
+ L+DG +V + Y+ R +HE + +G FFD+ + +E + G S N E+ V
Sbjct: 3783 HDILKDGDNVVSSDAYSLR-FHENQDYGAIRFFDVTDSREER--GKTSIKNQLEITMVFT 3839
Query: 629 LFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREK 688
L KL +P+ K S I++PY+ Q K+ ++ +K+ + ++I T+D QG EK
Sbjct: 3840 LIKKLTQDHPETKQYS-FGIVTPYKLQRKEIEDAYKQ---LNLSLNIEIKTIDSFQGSEK 3895
Query: 689 DVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEK 748
D+ I SCVR +SIGFL+D RR+NV ITRAK + ++G A+ L+ D+ W L+
Sbjct: 3896 DIMIMSCVR---NESIGFLSDRRRINVSITRAKYGLFIIGNATLLKLDRTWGELI----- 3947
Query: 749 QDCLFRVSKPYASFFSD-ENLESMRKNATTDNVQGADGHVPHDD 791
D L + + Y+ +D ENL N QG +DD
Sbjct: 3948 -DHLISIDRVYSINSNDIENLREQTIQFDLINPQGLITDFGNDD 3990
Score = 193 (73.0 bits), Expect = 4.5e-63, Sum P(3) = 4.5e-63
Identities = 49/121 (40%), Positives = 65/121 (53%)
Query: 182 NIHSLITSSVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSAS-EKSSGSQD 240
N H +I ++ L L++ S T RE AL +V P LIL + E + S
Sbjct: 3485 NCHGVINTNTP-----LSFLRVSSCVTFHRELDALETVAKSPLFPLILKPTIEAYNQSGK 3539
Query: 241 QSWKIPGLLHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHAT 300
W+IP LL ++ + N SQL AI+E L+ + LIQGPPGTGKT TI L+S IL
Sbjct: 3540 DRWEIPTLLKDHYNQTLNESQLAAINESLVHSSITLIQGPPGTGKTHTITSLISIILAIN 3599
Query: 301 P 301
P
Sbjct: 3600 P 3600
Score = 164 (62.8 bits), Expect = 4.3e-21, Sum P(3) = 4.3e-21
Identities = 63/236 (26%), Positives = 110/236 (46%)
Query: 379 CAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQKRDDSA 438
C PS++A+DE+ R++ G+ ++ Y P +VRIGLK + + + D V +R D
Sbjct: 3607 CGPSHAAVDEVAKRVIIKGLLNDRGEKYIPTMVRIGLKDNIQ-DPIVHDICVFNRRLDEK 3665
Query: 439 ADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEP 498
+H SI + L+ + SF + ++ D + P
Sbjct: 3666 KMILEHS-------SICFSTLSASGSNLVQSSFKPNVVI------VDEATQSCETSCIIP 3712
Query: 499 ATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRA--GYPVKMLKTQY 556
+L A K++ LVGDPVQLP T+ S + H G G SLF+RL + + + +
Sbjct: 3713 LSLG--AKSMKKLILVGDPVQLPPTIFSKESIHCGLGISLFERLSKVLPVSMLNVQYRMH 3770
Query: 557 RMHPEVRSFPSREFYDEALEDGSDVED--YTTRDWHEYRCFGPFSFFDIHEGKESQ 610
+ + S S+ ++D + + V Y+ R +HE + +G FFD+ + +E +
Sbjct: 3771 PLISKFPS--SQFYHDILKDGDNVVSSDAYSLR-FHENQDYGAIRFFDVTDSREER 3823
Score = 50 (22.7 bits), Expect = 4.5e-63, Sum P(3) = 4.5e-63
Identities = 20/99 (20%), Positives = 44/99 (44%)
Query: 48 KLGLREVKDTYKDVDDYLATFEPLLFEEVKAQII-QKKDEEEVQEWKLRLVMECGEADGF 106
+L L+E+ ++ D D Y + E L+ + +++ Q + E+
Sbjct: 2633 RLLLKEILESENDTDQYYSILEQLIQHQRSRKLLFQDFSNHKFTEYTKEFNYRRSGKTNI 2692
Query: 107 HLPSVTYEA--DEVESISP---NDLLLLSKEEFKEGSTF 140
+P++T ++V IS N++ LL K+ + S++
Sbjct: 2693 SIPTLTLPKTHEDVSLISRSSFNEIYLLIKKYQNDYSSY 2731
Score = 45 (20.9 bits), Expect = 2.4e-46, Sum P(3) = 2.4e-46
Identities = 20/81 (24%), Positives = 38/81 (46%)
Query: 159 LRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSAVEKRLFSLKICSLSTIAREYLALRS 218
+R Y+A V I + ++ L + IT +++ +K+ F ++CSL A
Sbjct: 1756 IRKYIAFRVF-IECCRIYQRKCLKEAAQITL-INSAKKQTFFAELCSLHNNA-------- 1805
Query: 219 VGSLPFKDLILSASEKSSGSQ 239
++ FKD+I K+ S+
Sbjct: 1806 --NVSFKDIIFKEYNKNISSE 1824
Score = 44 (20.5 bits), Expect = 1.9e-62, Sum P(3) = 1.9e-62
Identities = 8/22 (36%), Positives = 15/22 (68%)
Query: 56 DTYKDVDDYLATFEPLLFEEVK 77
D Y++ +Y +F+P+L EE +
Sbjct: 3337 DCYENHMEYKNSFKPILVEEFR 3358
Score = 40 (19.1 bits), Expect = 4.4e-47, Sum P(3) = 4.4e-47
Identities = 19/83 (22%), Positives = 38/83 (45%)
Query: 169 HINKDAVKSQRLLNIHSLITSSVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLI 228
H N+ +SQ SL+ SS++ ++ + K +++++ LA+ FK L+
Sbjct: 3551 HYNQTLNESQLAAINESLVHSSITLIQGPPGTGKTHTITSLISIILAINP----DFKILV 3606
Query: 229 LSASEKSSGSQDQSWKIPGLLHE 251
S + + I GLL++
Sbjct: 3607 CGPSHAAVDEVAKRVIIKGLLND 3629
Score = 38 (18.4 bits), Expect = 8.1e-62, Sum P(3) = 8.1e-62
Identities = 28/97 (28%), Positives = 41/97 (42%)
Query: 1 MAVDKDKPQDEASIFRFCK-IILGWDY-FR--LVKESQERND--KNSKKVDRGKLGLREV 54
M KD P+ S+ + I+ G ++ F+ L K ++D K KK K L E
Sbjct: 953 MDCKKDYPKYSGSLLDIRETIVKGKNHEFKEFLTKVVDIKSDIAKGLKKNSSLKDVLSEK 1012
Query: 55 KD--TYKDVDDYLATFEPLLFEEVKAQIIQKKDEEEV 89
TY ++ + L F L Q +Q KD EV
Sbjct: 1013 LSPITYSEIFEALFLFRALSEFNFFHQKVQLKDRLEV 1049
Score = 38 (18.4 bits), Expect = 5.5e-45, Sum P(4) = 5.5e-45
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 173 DAVKSQRLLNIHSLITSSVSAVEK 196
D K Q L + S++ +S + +EK
Sbjct: 556 DFQKIQPLFRLGSMLNNSYTGIEK 579
Score = 38 (18.4 bits), Expect = 5.5e-45, Sum P(4) = 5.5e-45
Identities = 8/42 (19%), Positives = 23/42 (54%)
Query: 419 HSVNSVAIDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILN 460
+ +N + ++ V+ + D+ + +++ +RDS +S + N
Sbjct: 1227 YGINHINVNLNVQNEIDNENYHCKNVNSSQNERDSEKSELSN 1268
Score = 37 (18.1 bits), Expect = 5.5e-45, Sum P(4) = 5.5e-45
Identities = 11/31 (35%), Positives = 19/31 (61%)
Query: 205 SLSTIAREYLALRSVGSLPFKDLILSASEKS 235
S STI+ L++ S L F + ++S+SE +
Sbjct: 895 SSSTISPPGLSVSSPLKLEFTNGLISSSESN 925
>DICTYBASE|DDB_G0268662 [details] [associations]
symbol:DDB_G0268662 "DNA2/NAM7 helicase family
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR003593 SMART:SM00382 dictyBase:DDB_G0268662
Pfam:PF03828 GO:GO:0005524 EMBL:AAFI02000004 GO:GO:0004386
eggNOG:COG1112 InterPro:IPR002058 ProtClustDB:CLSZ2429765
RefSeq:XP_646848.1 ProteinModelPortal:Q55F22
EnsemblProtists:DDB0304624 GeneID:8616531 KEGG:ddi:DDB_G0268662
InParanoid:Q55F22 Uniprot:Q55F22
Length = 2523
Score = 539 (194.8 bits), Expect = 1.8e-62, Sum P(3) = 1.8e-62
Identities = 124/344 (36%), Positives = 194/344 (56%)
Query: 455 RSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATG-CKQVFL 513
R AI+ A I+ +TLS SGS + + N ++V++DE+ Q+ EPA+L+PL G +++ L
Sbjct: 1702 RKAIIRNATIIFATLSASGSKPI-RSNFKANIVLVDESTQSSEPASLIPLCIGNIEKLIL 1760
Query: 514 VGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDE 573
VGDP+QLP T+ S + G SLF+RL + PV+ML TQYRMHP + FPS +FY +
Sbjct: 1761 VGDPLQLPPTIFSSESAKNGLNISLFERLSKV-LPVEMLNTQYRMHPTISRFPSNQFYKD 1819
Query: 574 ALEDGSDVED--YTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFH 631
L DG +V+ Y ++H +GP F+D+ + KE +G S N E+ V L
Sbjct: 1820 RLLDGDNVKSLVYNQHNFHSDIKYGPIRFYDVIDSKEE--SGKRSLKNKLEITMVFTLIK 1877
Query: 632 KLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVA 691
KL+ YP+ K S II+PY+ Q + +E+ K+ F ++ +T+DG QG EKD+
Sbjct: 1878 KLVQDYPECKKFS-FGIITPYKLQKSEIKEQHKQ-FNYPLN--IETSTIDGVQGSEKDII 1933
Query: 692 IFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDC 751
I SCVR+ + IGFL+D RR+NV +TRAK + V+G + L++D+ W + +
Sbjct: 1934 ILSCVRS---ERIGFLSDRRRINVALTRAKFGLFVIGNSKLLKKDRTWGPFCQYVHSINS 1990
Query: 752 LFRVSKPYASFFSDE--NLESMRKNATTD-NVQGADGHVPHDDE 792
+ + S + +S+ N + + D + +DE
Sbjct: 1991 MVSIDSKGISVLEQQIQEYDSLNPNGLIEFHSDSEDDYDDSEDE 2034
Score = 157 (60.3 bits), Expect = 1.8e-62, Sum P(3) = 1.8e-62
Identities = 71/268 (26%), Positives = 116/268 (43%)
Query: 51 LREVKDTYKDVDDYLATFEPLLFEEVKAQIIQKKDEEE---VQEWKLRLV----MECGEA 103
+ ++D+Y D +++ +PL+ EE +AQ+ +E E + E L+ ++ +
Sbjct: 1377 IHSLQDSYSDQSEFVNLMKPLIVEEYRAQLEGDFNEIEGVSISEQDGTLIGLDRVKMNDT 1436
Query: 104 DGFHLPSVTYEADEVESISPNDLLLLSKEEFKEGSTFPTTYAFALVEHCQANLLRLRMYL 163
H S ++++ +I N + K+E +E F +H + L +
Sbjct: 1437 PTIH--SFRELSEDLVAIKFN---IKVKDELEE-IYLNDILLFKTFDHTSKPMFALGLVT 1490
Query: 164 AGEVIHINKDAVKSQRLLNIHS--LITS--SVSAVEKR----LFSLKICSLSTIAREYLA 215
+ V+ K + + +L+ + LI SVS K L +K+ + +T RE A
Sbjct: 1491 SNSVLKGKKQIIICEFVLSDSTKPLIEKFYSVSLNSKTSKDILHFIKVSNSTTFIRELEA 1550
Query: 216 LRSV-GSLPFKDLILSAS-EKSSGSQDQSWKIPGLLHEYIKENHNASQLEAIHEGLLRKA 273
S + IL S E + +IP LL + N SQ A+ L K
Sbjct: 1551 PEIFKNSKTLLNQILQPSLEVYNLMTSMRMEIPSLLRSMCIQELNTSQFSAVETSLSTKG 1610
Query: 274 FVLIQGPPGTGKTQTILGLLSAILHATP 301
LIQGPPGTGKT TI LLS +L P
Sbjct: 1611 ITLIQGPPGTGKTTTIYYLLSILLAINP 1638
Score = 71 (30.1 bits), Expect = 1.8e-62, Sum P(3) = 1.8e-62
Identities = 13/36 (36%), Positives = 23/36 (63%)
Query: 379 CAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIG 414
C PS++++DE+ R L + + + + Y P +VRIG
Sbjct: 1645 CGPSHASVDEVAKRCLKKSLVNIDGKPYLPNMVRIG 1680
Score = 51 (23.0 bits), Expect = 2.2e-51, Sum P(3) = 2.2e-51
Identities = 26/103 (25%), Positives = 50/103 (48%)
Query: 145 AFALVE-HCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSAVEKRLFSLKI 203
AF L+ H Q +++ ++ + I I + + Q LNI S + + LF L +
Sbjct: 966 AFNLLNIHHQRFCIKVEAFIDQKSIDI-LNYIPEQVELNIKSKSKKTEYTMNVELFKLPL 1024
Query: 204 C-------SLSTIAREYLA-LRSVGSLPFKDLILSASEKSSGS 238
++ T+ + ++ ++S+ L +KDL LS S+K S +
Sbjct: 1025 GHKNQSDNTIGTLIKSFIIYIKSL-VLDYKDLSLSNSQKISNT 1066
Score = 46 (21.3 bits), Expect = 7.2e-51, Sum P(3) = 7.2e-51
Identities = 24/97 (24%), Positives = 44/97 (45%)
Query: 180 LLNIHSLITSSVSAVEKRLFSL------KICSLSTIAREYLALR-SVGSLPF--KDLILS 230
L NI ++I S +EK++FSL K + ++ +Y A +G + KD+I
Sbjct: 830 LSNIPTVILKKPSNIEKQIFSLFNTFFNKPEEIDSLKNQYPAFNLQIGLIKSATKDIISL 889
Query: 231 ASEKSSGSQDQSWKIPGLLHEYIKENHNASQLEAIHE 267
K ++ + K + E + + N S+ I+E
Sbjct: 890 FKRKIEFHKNNTSKA---VQELLISSVNPSKFNEINE 923
>ZFIN|ZDB-GENE-070402-1 [details] [associations]
symbol:setx "senataxin" species:7955 "Danio rerio"
[GO:0006302 "double-strand break repair" evidence=IEA]
InterPro:IPR026121 ZFIN:ZDB-GENE-070402-1 GO:GO:0006302
InterPro:IPR024481 Pfam:PF12726 GeneTree:ENSGT00580000081652
PANTHER:PTHR10887:SF15 EMBL:CU927918 IPI:IPI00481119
Ensembl:ENSDART00000082314 Ensembl:ENSDART00000149777
Uniprot:E7FBJ2
Length = 2368
Score = 531 (192.0 bits), Expect = 1.0e-54, Sum P(3) = 1.0e-54
Identities = 138/364 (37%), Positives = 204/364 (56%)
Query: 422 NSVAIDHLVEQKRDDSAADKQKHGATR--KD----RDSIRSAILNEAVIVCSTLSFSGSA 475
NS +L+EQK+ K++ G +R K+ R ++ +L A ++C TLS SGS
Sbjct: 1885 NSTEFKNLLEQKKQFL---KEREGLSRQIKECRGRRQESQALVLQNAHVICCTLSTSGSI 1941
Query: 476 LLS----KLNHG-FDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAE 530
+L +L H F VIIDEA+QA E TL+P+ C V LVGDP QLP TV+S A+
Sbjct: 1942 VLENAFRRLGHEPFSCVIIDEASQAKETETLIPMLYRCPSVILVGDPNQLPPTVVSQKAK 2001
Query: 531 HLGYGTSLFKRLQRAGYP-------VKMLKTQYRMHPEVRSFPSREFYDEALE-DGSDVE 582
G+ SL RL ++ +P + +L QYRMHP++ FPS+ Y+ AL+ D +
Sbjct: 2002 EFGFDQSLMARLCKSLHPSNSKLPPILLLSMQYRMHPDICEFPSKYIYNSALKNDCETAQ 2061
Query: 583 DYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKS 642
+ W F P+ FD+ +G+E++ S +IN EV V LL KL+ +
Sbjct: 2062 KRCSLSWP----FKPYKVFDVMDGRETKERDS--FINHKEVSLVGLLL-KLLCK----EQ 2110
Query: 643 SSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKK 702
+ ++ +I+PY Q + + K T G+ Q V++ TVDG QGRE D I SCVRAS +
Sbjct: 2111 AVRVGVITPYNAQKHRILDAIK-TSGINKQLQVEVDTVDGFQGREMDCIIVSCVRASSEM 2169
Query: 703 -SIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRVSKPYAS 761
SIGF+ + +RMNV ITRAK S+ ++G TLRE W L++ A +++C+ + +
Sbjct: 2170 GSIGFVGNRQRMNVTITRAKFSLFILGHLRTLREQSDWGALIEDAGRRECIINTMQK--N 2227
Query: 762 FFSD 765
F SD
Sbjct: 2228 FESD 2231
Score = 114 (45.2 bits), Expect = 1.0e-54, Sum P(3) = 1.0e-54
Identities = 77/311 (24%), Positives = 135/311 (43%)
Query: 8 PQDEASIFRFCKIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLAT 67
P+ + S+ + IL W+Y R++ + +D +L L+EV + +Y T
Sbjct: 1484 PKFDLSVLT--QAILKWEY-RML----DNYKAFGSPLDLCQLPLKEVPVNFSSYLEYFNT 1536
Query: 68 FEPLLFEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADEVESISPN-DL 126
PLL + A ++ E ++E +++L ++ G + T A + +S D+
Sbjct: 1537 LYPLLL--INA--FEEMANEWLKEGRVKLYLK---VQGIEYSNRTASASFIAGLSQECDV 1589
Query: 127 L-LLSKEEFKEGSTFP-TTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIH 184
+ KE+ P T A+A E +L Y++ + +N+ S+ LN+
Sbjct: 1590 KQIYPKEDDLVLLWLPDNTGAYAQDEPNFHDLHPHFGYVSRSNV-LNRTP-GSRSTLNLT 1647
Query: 185 SLITSSVSAVEKRLFSLKIC-SLSTIAREYLALRSVGSLPF-KDLILSASEKSSGSQDQS 242
+VS+V + ++ SL +I RE+ AL + + P + L+ + S D
Sbjct: 1648 IQTRGNVSSVNSQPVLCEVVGSLISIFREFRALCLLRNGPMLRPLLAPHVSFFTHSLDGP 1707
Query: 243 WKIPGLLHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILH---- 298
+ + A + IH F+LI GPPGTGK++TI GLL +L
Sbjct: 1708 SDLDAPEFNRDQARAIACGIAMIHRKQKTPKFLLIHGPPGTGKSKTIGGLLYKLLSSATN 1767
Query: 299 --ATPARVHSK 307
AT +HSK
Sbjct: 1768 SSATVGNLHSK 1778
Score = 49 (22.3 bits), Expect = 1.0e-54, Sum P(3) = 1.0e-54
Identities = 7/16 (43%), Positives = 14/16 (87%)
Query: 379 CAPSNSALDEIVLRLL 394
CAPSN+A+D ++ +++
Sbjct: 1787 CAPSNAAIDSLMKKVI 1802
Score = 46 (21.3 bits), Expect = 3.9e-47, Sum P(2) = 3.9e-47
Identities = 13/66 (19%), Positives = 29/66 (43%)
Query: 387 DEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQKRDDSAADKQKHGA 446
D +++ L + NI+ K+ I + + + I+ + +K D SA + GA
Sbjct: 685 DPVLISELRPAVELTNIKPDLGKLQEIRSRLNDDQSLSKIEAIARKKSDVSAKKRPGFGA 744
Query: 447 TRKDRD 452
+ + +
Sbjct: 745 LKNEEE 750
>UNIPROTKB|E1C4T7 [details] [associations]
symbol:Gga.18015 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] InterPro:IPR026121 GO:GO:0005737 GO:GO:0005654
GO:GO:0006302 GeneTree:ENSGT00580000081652 OMA:RLINHFE
PANTHER:PTHR10887:SF15 EMBL:AADN02026516 IPI:IPI00575045
Ensembl:ENSGALT00000005801 Uniprot:E1C4T7
Length = 2503
Score = 511 (184.9 bits), Expect = 1.2e-53, Sum P(3) = 1.2e-53
Identities = 136/353 (38%), Positives = 191/353 (54%)
Query: 426 IDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKL--NHG 483
I L ++++ ++ K+ G ++K +++ I+ E+ I+C TLS SG LL G
Sbjct: 2139 IGRLSKERQQLASQLKEVRGHSQK----VQTDIILESDIICCTLSTSGGGLLESAFWRQG 2194
Query: 484 FD---VVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFK 540
D VI+DEA Q+ E TL+PL C ++ LVGDP QLP T+ S A+ GYG SL
Sbjct: 2195 LDPFSCVIVDEAGQSCEVETLIPLIHRCNKLVLVGDPRQLPPTIKSIKAQEYGYGQSLMA 2254
Query: 541 RLQR-----------AGYPVKMLKTQYRMHPEVRSFPSREFYDEALE-DGSDVEDYTTRD 588
RLQR PV L QYRMHP++ FPS YD+ L+ D + E+ + +
Sbjct: 2255 RLQRHLEEQVQNNLLRRLPVVQLTVQYRMHPDICLFPSSYIYDKTLKTDKATEENRCSSE 2314
Query: 589 WHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAI 648
W F P+ FD+ +G E + S S N EV VL + + L ++ I
Sbjct: 2315 WP----FQPYLVFDVGDGHEERDKDSFS--NPQEVKLVLEIIRTIKEKRKDL-GLRRIGI 2367
Query: 649 ISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRA-SDKKSIGFL 707
I+PY Q K+ QE F S VD TVD QGREKD I +CVRA S K SIGFL
Sbjct: 2368 ITPYSAQKKKIQEELDRVFKNNSPGEVD--TVDAFQGREKDCIIVTCVRANSSKGSIGFL 2425
Query: 708 ADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRVS-KPY 759
A +R+NV ITRA+ S+ ++G TL E+K WN L++ A+++ + + S K Y
Sbjct: 2426 ASLQRLNVTITRARFSLFILGRLKTLMENKDWNKLIQDAQRRGAIIKTSDKSY 2478
Score = 109 (43.4 bits), Expect = 1.2e-53, Sum P(3) = 1.2e-53
Identities = 60/253 (23%), Positives = 106/253 (41%)
Query: 58 YKDVDDYLATFEPLL----FEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTY 113
++ +DY TF PL+ FE + + ++ + ++ + + L L C + +
Sbjct: 1761 FQGYNDYFNTFFPLMMLNAFETLAQEWVENQKMKD-KTYYLHLQNFCADLNTAEFIGYFE 1819
Query: 114 EADEVESISP--NDLLLLSKEEFKEGSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHIN 171
E D + + P +DL+ L ++ K LV H L+R +G + N
Sbjct: 1820 ETDLTKQLHPKEDDLIFLVGQKKKNVFGEDREVEDHLVNH--VGLVRRFSRASGCLTRQN 1877
Query: 172 KDAVKSQRLLNIHSLITSSVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSA 231
L++ + S V + + + SL R + L + P I++
Sbjct: 1878 DQHTVCH--LSVQTRGNLSFF-VNNEVKCMVVGSLVPTQRSFKGLLLLSRSPLAKPIINP 1934
Query: 232 SEKSSGSQD---QSWKIPGLLHEYIKENHNASQLE-AI---HEGLLRKAFVLIQGPPGTG 284
S +D S ++EY ++ A + A+ H GL + LI GPPGTG
Sbjct: 1935 SYSDFCPRDLPVSSESATFCMNEYNEDQKRAIETAYAMVKQHPGLAK--ICLIHGPPGTG 1992
Query: 285 KTQTILGLLSAIL 297
K++TI+GLLS +L
Sbjct: 1993 KSKTIVGLLSRVL 2005
Score = 69 (29.3 bits), Expect = 1.2e-53, Sum P(3) = 1.2e-53
Identities = 24/88 (27%), Positives = 44/88 (50%)
Query: 379 CAPSNSALDEIVLRLLNTGIRDENIRSYTP-------KIVRIGLKAHHSVNSVA------ 425
CAPSN+A+DE++ +++ +++ P K+VR+G A S+NS
Sbjct: 2029 CAPSNAAIDELMKKII-IAFKEKCQNRQEPLGNCGDIKLVRLG--AERSINSEVRAFSLD 2085
Query: 426 --IDHLVEQKRDDSAADKQKHGATRKDR 451
++H +++K D D QK A ++
Sbjct: 2086 KQVEHRMKRKPTDRDQDIQKKKAALDEK 2113
Score = 54 (24.1 bits), Expect = 6.5e-48, Sum P(3) = 6.5e-48
Identities = 32/146 (21%), Positives = 56/146 (38%)
Query: 114 EADEVESISPNDLLLLSKEEFKEGSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKD 173
E D ES+ ND L + K ++K+ + H N ++ + K
Sbjct: 1552 EIDHAESLQQNDTLTVVKCKYKDCTEKVKKIGDCCSRHLATNSESDHLFAKPSSLPPRKP 1611
Query: 174 AVKSQRLLNIHSLITSSVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASE 233
+ I SSVS+ FS L + ++ AL+S S+ ++ SE
Sbjct: 1612 STTK---------IFSSVSSSRNAAFSK---DLENVEKQPPALKSRASIAKPAVLRPRSE 1659
Query: 234 KSSGSQDQSWKIPG---LLHEYIKEN 256
K+ ++ Q+ + P + YI N
Sbjct: 1660 KAIPTRKQTCRTPSSSNIPQPYISNN 1685
Score = 51 (23.0 bits), Expect = 1.3e-47, Sum P(3) = 1.3e-47
Identities = 11/35 (31%), Positives = 21/35 (60%)
Query: 121 ISPNDLLLLSKEEFKEGSTFPTTYAFAL-VEHCQA 154
+ P D+ L S++E EG+T TT + ++H ++
Sbjct: 1524 LDPVDMELCSQDEDAEGNTIATTRTEEMEIDHAES 1558
>UNIPROTKB|F1S0U6 [details] [associations]
symbol:SETX "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007623 "circadian rhythm" evidence=IEA] [GO:0006369
"termination of RNA polymerase II transcription" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
InterPro:IPR026121 GO:GO:0005737 GO:GO:0005654 GO:GO:0006302
KO:K10706 GeneTree:ENSGT00580000081652 CTD:23064 OMA:RLINHFE
PANTHER:PTHR10887:SF15 EMBL:CU550727 EMBL:CU914573
RefSeq:XP_003353743.1 UniGene:Ssc.45527 Ensembl:ENSSSCT00000006294
GeneID:100511239 KEGG:ssc:100511239 Uniprot:F1S0U6
Length = 2661
Score = 489 (177.2 bits), Expect = 1.8e-50, Sum P(3) = 1.8e-50
Identities = 131/350 (37%), Positives = 189/350 (54%)
Query: 430 VEQKRDDSAAD-KQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHG----- 483
V ++R + A+ K+ G +K +++I IL E+ I+C TLS SG LL G
Sbjct: 2113 VSKERQELASKIKEVQGRPQKTQNTI---IL-ESHIICCTLSTSGGLLLESAFRGQGGVP 2168
Query: 484 FDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQ 543
F VI+DEA Q+ E TL PL C ++ LVGDP QLP TVIS A+ GY S+ R
Sbjct: 2169 FSCVIVDEAGQSCEVETLTPLIHRCNKLVLVGDPKQLPPTVISMKAQDYGYDQSMMARFY 2228
Query: 544 RA----------G-YPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVE-DYTTRDWHE 591
+ G P+ L QYRMHP++ FPS Y+ L+ S E + DW
Sbjct: 2229 KLLEENVEHNVIGRLPILQLTVQYRMHPDICLFPSNYIYNRNLKTNSLTEASRCSSDWP- 2287
Query: 592 YRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISP 651
F P+ FD+ +G E + + S++N+ E+ V+ + KLI + + + II+
Sbjct: 2288 ---FQPYLVFDVGDGSERRD--NDSYVNVQEIKLVMEII-KLIKDKRRDVTFRNIGIITH 2341
Query: 652 YRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKK-SIGFLADY 710
Y+ Q Q+ + F + VD TVDG QGR+KD I +CVRA + SIGFLA
Sbjct: 2342 YKAQKTLIQKDLDKEFDRKGPAEVD--TVDGFQGRQKDCVIVTCVRAKTSQGSIGFLASL 2399
Query: 711 RRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRV-SKPY 759
+R+NV ITRAK S+ ++G TLRE+ HWN L++ A+K+ + + K Y
Sbjct: 2400 QRLNVTITRAKYSLFILGHLRTLRENDHWNQLIEDAQKRGAIIKTCDKNY 2449
Score = 120 (47.3 bits), Expect = 1.8e-50, Sum P(3) = 1.8e-50
Identities = 71/277 (25%), Positives = 119/277 (42%)
Query: 52 REVKDTYKDVDDYLATFEPLL----FEEVKAQIIQKKDEEEVQEWKLRLVMECGEAD-GF 106
R V ++D DY + F PL+ FE V + I ++E+ + LR AD
Sbjct: 1726 RRVPVRFQDCGDYFSVFFPLMILNTFETVAQEWISSPNKEKFHQLHLRKF----PADYKK 1781
Query: 107 HLPSVTY--EADEVESISP--NDLLLLSKEEFKEGSTFPTTYAFALVE-HC-QANLLRLR 160
+ V Y E + + + P NDL+ L E A + E HC + R
Sbjct: 1782 YWEFVVYLEECELAKQLHPKENDLVFLVPERLNGEKDVERNRAHSPREYHCGYVHKFRRT 1841
Query: 161 MYLAGEVIHINKDAVKSQRL---LN--IHSLITSSVSAVEKRLFSLKICS-LSTIAREYL 214
+ + +L LN + ++ SS+ +++L ++ + S + +AR
Sbjct: 1842 SVMRSGKSECSLSIQTQDKLPVNLNEFVKCVVISSLVTTQRKLKAMSLLSGRNQLAR--- 1898
Query: 215 ALRSVGSLPF--KDLILSASEKSSGSQDQSWKIPGLLHEYIKENHNASQLE-AI--HEGL 269
A+ + + F KDL+ + SE+ I L ++ ++ A + A+ H
Sbjct: 1899 AILNPNPMDFCTKDLLTTTSER----------IIAYLRDFNEDQKKAIETAYAMVKHSPS 1948
Query: 270 LRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHS 306
+ K LI GPPGTGK++TI+GLL +L R HS
Sbjct: 1949 VAK-ICLIHGPPGTGKSKTIVGLLYRLLTENQRRGHS 1984
Score = 54 (24.1 bits), Expect = 1.8e-50, Sum P(3) = 1.8e-50
Identities = 8/16 (50%), Positives = 15/16 (93%)
Query: 379 CAPSNSALDEIVLRLL 394
CAPSN+A+DE++ +++
Sbjct: 2000 CAPSNAAVDELMKKII 2015
Score = 37 (18.1 bits), Expect = 3.8e-41, Sum P(4) = 3.8e-41
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 67 TFEPLLFEEVKAQIIQKKDEEEV-QEWK 93
T PL FEE +Q + + EV W+
Sbjct: 1065 TGSPLQFEESDSQFFEFESPYEVFSVWQ 1092
Score = 37 (18.1 bits), Expect = 3.8e-41, Sum P(4) = 3.8e-41
Identities = 10/40 (25%), Positives = 18/40 (45%)
Query: 241 QSWKIPGLLHEYIKENHNASQLEAIHEGLLRKAFVLIQGP 280
+S I GLL+ + EN + +++ VL+ P
Sbjct: 1963 KSKTIVGLLYRLLTENQRRGHSDENSNAKIKQNRVLVCAP 2002
>UNIPROTKB|F1PHA4 [details] [associations]
symbol:SETX "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006302 "double-strand break repair"
evidence=IEA] InterPro:IPR026121 GO:GO:0006302
GeneTree:ENSGT00580000081652 OMA:RLINHFE PANTHER:PTHR10887:SF15
EMBL:AAEX03006816 EMBL:AAEX03006817 Ensembl:ENSCAFT00000031656
Uniprot:F1PHA4
Length = 2531
Score = 490 (177.5 bits), Expect = 2.9e-49, Sum P(4) = 2.9e-49
Identities = 128/350 (36%), Positives = 190/350 (54%)
Query: 430 VEQKRDDSAAD-KQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHG----- 483
V ++R + A+ K+ G +K + S I+ E+ ++C TLS SG LL G
Sbjct: 2142 VSKERQELASKIKEVQGRPQKTQ----SIIILESHVICCTLSTSGGLLLESAFRGQGGVP 2197
Query: 484 FDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQ 543
F VI+DEA Q+ E TL PL C ++ LVGDP QLP TVIS A+ GY S+ R
Sbjct: 2198 FSCVIVDEAGQSCEVETLTPLIHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMARFY 2257
Query: 544 RA----------G-YPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVE-DYTTRDWHE 591
+ G PV L QYRMHP++ FPS Y+ +L+ E + + DW
Sbjct: 2258 KLLEDNVEHNMIGRLPVLQLTVQYRMHPDICLFPSNYVYNRSLKTNRQTETNRCSSDWP- 2316
Query: 592 YRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISP 651
F P+ FD+ +G E + + S++N+ E+ V+ + KLI + + + II+
Sbjct: 2317 ---FQPYLVFDVGDGSERRD--NDSYVNVQEIKLVMEII-KLIKDKRRDVTFRNIGIITH 2370
Query: 652 YRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKK-SIGFLADY 710
Y+ Q Q+ + F + VD TVDG QGR+KD I +CVRA+ + SIGFLA
Sbjct: 2371 YKAQKTMIQKDLDKEFDRKGPAEVD--TVDGFQGRQKDCVIVTCVRANAMQGSIGFLASL 2428
Query: 711 RRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRV-SKPY 759
+R+NV ITRAK S+ ++G TL E++HWN+L++ A+K+ + + K Y
Sbjct: 2429 QRLNVTITRAKYSLFILGHLRTLMENQHWNHLIQDAQKRGAIIKTCDKNY 2478
Score = 105 (42.0 bits), Expect = 2.9e-49, Sum P(4) = 2.9e-49
Identities = 69/274 (25%), Positives = 116/274 (42%)
Query: 52 REVKDTYKDVDDYLATFEPLL----FEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGFH 107
R V ++D DY F PL+ FE V + I ++E+ + LR +
Sbjct: 1754 RPVPVRFQDCGDYFNVFFPLMILNTFETVAQEWISSPNKEKFYQLHLRK-FPADYKKYWE 1812
Query: 108 LPSVTYEADEVESISP--NDLLLLSKEEFKEGSTFPTTYAFALVEHCQANLLR-LRMYLA 164
E + + + P NDL+ L E + G T + N ++ LR Y
Sbjct: 1813 FVVHLEECELAKQLHPKENDLVFLISER-QNGEKKDT----------ERNRMQDLREYHC 1861
Query: 165 GEVIHINKDAV----KSQRLLNIHSLITSSVSAVEKRLFSLKICSLSTIAREYLALRSV- 219
G V + +V KS+ L I + V+ + + + + I SL T R+ A+ +
Sbjct: 1862 GYVHKFRRTSVMRNGKSECFLYIQTQDNLPVN-LNEFVKCVVISSLVTTQRKLKAMSLLS 1920
Query: 220 GSLPFKDLILSASEKSSGSQD----QSWKIPGLLHEYIKENHNASQLE-AI--HEGLLRK 272
G +L+ + ++D S +I L ++ ++ A + A+ H + K
Sbjct: 1921 GRNQLARAVLNPNPMDFCTKDLLTTTSERIVAYLRDFNEDQKKAIETAYAMVKHSPSVAK 1980
Query: 273 AFVLIQGPPGTGKTQTILGLLSAILHATPARVHS 306
LI GPPGTGK++TI+GLL +L + HS
Sbjct: 1981 -ICLIHGPPGTGKSKTIVGLLYRLLTENQRKGHS 2013
Score = 54 (24.1 bits), Expect = 2.9e-49, Sum P(4) = 2.9e-49
Identities = 8/16 (50%), Positives = 15/16 (93%)
Query: 379 CAPSNSALDEIVLRLL 394
CAPSN+A+DE++ +++
Sbjct: 2029 CAPSNAAVDELMKKII 2044
Score = 45 (20.9 bits), Expect = 2.9e-49, Sum P(4) = 2.9e-49
Identities = 10/40 (25%), Positives = 18/40 (45%)
Query: 9 QDEASIFRF---CKIILGWDYFRLVKESQERNDKNSKKVD 45
+ ++ F F C++ W K S + +KNS+ D
Sbjct: 1090 ESDSQFFEFESPCEVFSVWQDQEPDKNSVQEGEKNSRSTD 1129
Score = 37 (18.1 bits), Expect = 3.2e-42, Sum P(4) = 3.2e-42
Identities = 10/40 (25%), Positives = 18/40 (45%)
Query: 241 QSWKIPGLLHEYIKENHNASQLEAIHEGLLRKAFVLIQGP 280
+S I GLL+ + EN + +++ VL+ P
Sbjct: 1992 KSKTIVGLLYRLLTENQRKGHSDENSNAKIKQNRVLVCAP 2031
>MGI|MGI:2443480 [details] [associations]
symbol:Setx "senataxin" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005654 "nucleoplasm" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=ISO] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IMP] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR026121 MGI:MGI:2443480 GO:GO:0005524 GO:GO:0005737
GO:GO:0005654 GO:GO:0005730 GO:GO:0007623 GO:GO:0006302
GO:GO:0004386 eggNOG:COG1112 GO:GO:0006369 KO:K10706 EMBL:AL772379
GeneTree:ENSGT00580000081652 CTD:23064 HOVERGEN:HBG108476
OrthoDB:EOG4XWFWX PANTHER:PTHR10887:SF15 EMBL:AL845267
EMBL:AK044730 EMBL:AK048354 EMBL:AK077911 EMBL:BC046382
EMBL:BC058109 EMBL:BC079604 EMBL:AK129177 EMBL:BK001523
IPI:IPI00421108 IPI:IPI00626271 RefSeq:NP_932150.2 UniGene:Mm.41867
ProteinModelPortal:A2AKX3 SMR:A2AKX3 DIP:DIP-56995N IntAct:A2AKX3
STRING:A2AKX3 PhosphoSite:A2AKX3 PaxDb:A2AKX3 PRIDE:A2AKX3
Ensembl:ENSMUST00000061578 Ensembl:ENSMUST00000129544 GeneID:269254
KEGG:mmu:269254 UCSC:uc008izm.1 InParanoid:A2AKX3 NextBio:392760
Bgee:A2AKX3 CleanEx:MM_SETX Genevestigator:A2AKX3 Uniprot:A2AKX3
Length = 2646
Score = 478 (173.3 bits), Expect = 8.2e-48, Sum P(3) = 8.2e-48
Identities = 128/351 (36%), Positives = 185/351 (52%)
Query: 427 DHL-VEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHG-- 483
+H+ + K A K K R R ++ I+ E+ ++C TLS SG LL G
Sbjct: 2090 EHIAIVSKERQELASKIKEVQGRPQR--AQNTIILESHVICCTLSTSGGLLLESAFRGQG 2147
Query: 484 ---FDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFK 540
F VI+DEA Q+ E TL PL C ++ LVGDP QLP TVIS A+ GY S+
Sbjct: 2148 GVPFSCVIVDEAGQSCEVETLSPLIHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMA 2207
Query: 541 RLQRA----------G-YPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYT-TRD 588
R + G PV L QYRMHP++ FPS Y++ L+ E + +
Sbjct: 2208 RFCKLLEENVEQNMIGRLPVLQLTIQYRMHPDICLFPSNYVYNKNLKTNRLTESIRCSSE 2267
Query: 589 WHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAI 648
W F P+ FD+ +G E + + S+IN+ E+ V+ + KLI + S + I
Sbjct: 2268 WP----FQPYLVFDVGDGSERRD--NDSYINVQEIKLVMEII-KLIKEKRKDISFRNIGI 2320
Query: 649 ISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKK-SIGFL 707
I+ Y+ Q Q+ ++ F + VD TVD QGR+KD I +CVRAS + SIGFL
Sbjct: 2321 ITHYKAQKTMIQKDLEKEFDKKGPAEVD--TVDAFQGRQKDCIIVTCVRASAVQGSIGFL 2378
Query: 708 ADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRVSKP 758
A +R+NV ITRAK S+ ++G TL E++HW L++ A+K+ + + S P
Sbjct: 2379 ASLQRLNVTITRAKYSLFILGHLRTLMENQHWYELIQDAQKRGAIIKTSDP 2429
Score = 107 (42.7 bits), Expect = 8.2e-48, Sum P(3) = 8.2e-48
Identities = 73/311 (23%), Positives = 131/311 (42%)
Query: 13 SIF-RFCKIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPL 71
SIF F K +L W Y + DK + R V ++D +Y F PL
Sbjct: 1677 SIFDTFIKEVLKWKYQMFLNF-----DKCGAPTSLCQSISRPVPVRFQDCAEYFNVFLPL 1731
Query: 72 L----FEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADEVESISP--ND 125
+ FE V + + ++E + +LR + E++ + + P ND
Sbjct: 1732 IILNAFETVAQEWLSSPNKENFYQLQLRK-FPADYKKYWEFLIYLNESELAKQLHPKEND 1790
Query: 126 LLLLSKEEF---KEGSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLN 182
L+ L+ E+ + G + Y V + + +R A + I + N
Sbjct: 1791 LVFLAPEKSYMDRHGMQDCSHYYCGYVHKFRRTSV-MRSGKAECSLCIQTQDTLPASVKN 1849
Query: 183 I-HSLITSSVSAVEKRLFSLKICSL-STIAREYLALRSVGSLPF--KDLILSASEKSSGS 238
+ ++ SS+ +++L ++ + S + +AR A+ + + F KDL+ + SE+
Sbjct: 1850 LTRCIVISSLVTTQRKLKAMSLLSSRNQLAR---AVLNPNPMDFCTKDLLTTTSER---- 1902
Query: 239 QDQSWKIPGLLHEYIKENHNASQLE-AI--HEGLLRKAFVLIQGPPGTGKTQTILGLLSA 295
I L ++ ++ A + A+ H + K LI GPPGTGK++TI+GLL
Sbjct: 1903 ------IVAYLKDFNEDQKKAIETAYAMVKHSPSVAK-ICLIHGPPGTGKSKTIVGLLYR 1955
Query: 296 ILHATPARVHS 306
+L + HS
Sbjct: 1956 LLTENQRKGHS 1966
Score = 54 (24.1 bits), Expect = 8.2e-48, Sum P(3) = 8.2e-48
Identities = 8/16 (50%), Positives = 15/16 (93%)
Query: 379 CAPSNSALDEIVLRLL 394
CAPSN+A+DE++ +++
Sbjct: 1982 CAPSNAAVDELMKKII 1997
Score = 45 (20.9 bits), Expect = 1.2e-40, Sum P(4) = 1.2e-40
Identities = 21/94 (22%), Positives = 34/94 (36%)
Query: 31 KESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFE---PLLFEEVKAQIIQKKDEE 87
+ S E N K SK V+ L E P+ FE+ ++Q+ + +
Sbjct: 1015 RSSSEENIKQSKACIGKDCSEHRSLAVNASVEKQLVKEEERYPVEFEDSESQVFEFESSS 1074
Query: 88 EV-QEWKLRLVMECGEADGFHLPSVTYEADEVES 120
EV W+ + G VT+ AD +
Sbjct: 1075 EVFSVWQDHKIDSKNSLQGEQKSYVTHVADSTNN 1108
Score = 37 (18.1 bits), Expect = 1.2e-40, Sum P(4) = 1.2e-40
Identities = 10/40 (25%), Positives = 18/40 (45%)
Query: 241 QSWKIPGLLHEYIKENHNASQLEAIHEGLLRKAFVLIQGP 280
+S I GLL+ + EN + +++ VL+ P
Sbjct: 1945 KSKTIVGLLYRLLTENQRKGHSDENFNAKIKQNRVLVCAP 1984
>UNIPROTKB|Q7Z333 [details] [associations]
symbol:SETX "Probable helicase senataxin" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008219
"cell death" evidence=IEA] [GO:0006369 "termination of RNA
polymerase II transcription" evidence=IEA] [GO:0007623 "circadian
rhythm" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IC] [GO:0003678 "DNA helicase
activity" evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005654 "nucleoplasm"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006302
"double-strand break repair" evidence=IDA] [GO:0032508 "DNA duplex
unwinding" evidence=TAS] InterPro:IPR026121 GO:GO:0005524
GO:GO:0005737 GO:GO:0005654 GO:GO:0005730 GO:GO:0003677
GO:GO:0008219 GO:GO:0006396 GO:GO:0006302 Orphanet:803
eggNOG:COG1112 GO:GO:0003678 KO:K10706 EMBL:AL159997 Orphanet:64753
EMBL:AY362728 EMBL:BX537849 EMBL:BX538166 EMBL:CR749249
EMBL:AL353701 EMBL:BC032600 EMBL:BC032622 EMBL:BC078166
EMBL:BC106017 EMBL:BC137350 EMBL:AB014525 EMBL:AK001456
EMBL:AK022902 IPI:IPI00142538 IPI:IPI00646645 IPI:IPI00719643
RefSeq:NP_055861.3 UniGene:Hs.460317 ProteinModelPortal:Q7Z333
SMR:Q7Z333 IntAct:Q7Z333 STRING:Q7Z333 PhosphoSite:Q7Z333
DMDM:296453021 PaxDb:Q7Z333 PRIDE:Q7Z333 Ensembl:ENST00000224140
Ensembl:ENST00000372169 Ensembl:ENST00000393220
Ensembl:ENST00000436441 GeneID:23064 KEGG:hsa:23064 UCSC:uc004cbj.3
UCSC:uc004cbk.3 UCSC:uc010mzt.3 CTD:23064 GeneCards:GC09M135136
HGNC:HGNC:445 HPA:HPA024105 MIM:602433 MIM:606002 MIM:608465
neXtProt:NX_Q7Z333 PharmGKB:PA24751 HOVERGEN:HBG108476
InParanoid:Q7Z333 OMA:RLINHFE OrthoDB:EOG4XWFWX PhylomeDB:Q7Z333
ChiTaRS:SETX GenomeRNAi:23064 NextBio:44145 ArrayExpress:Q7Z333
Bgee:Q7Z333 Genevestigator:Q7Z333 GermOnline:ENSG00000107290
PANTHER:PTHR10887:SF15 Uniprot:Q7Z333
Length = 2677
Score = 484 (175.4 bits), Expect = 2.9e-47, Sum P(3) = 2.9e-47
Identities = 129/350 (36%), Positives = 186/350 (53%)
Query: 430 VEQKRDDSAAD-KQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHG----- 483
V ++R + A+ K+ G +K + S I+ E+ I+C TLS SG LL G
Sbjct: 2119 VSKERQELASKIKEVQGRPQKTQ----SIIILESHIICCTLSTSGGLLLESAFRGQGGVP 2174
Query: 484 FDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQ 543
F VI+DEA Q+ E TL PL C ++ LVGDP QLP TVIS A+ GY S+ R
Sbjct: 2175 FSCVIVDEAGQSCEIETLTPLIHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMARFC 2234
Query: 544 R-----------AGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYT-TRDWHE 591
R + P+ L QYRMHP++ FPS Y+ L+ E + DW
Sbjct: 2235 RLLEENVEHNMISRLPILQLTVQYRMHPDICLFPSNYVYNRNLKTNRQTEAIRCSSDWP- 2293
Query: 592 YRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISP 651
F P+ FD+ +G E + + S+IN+ E+ V+ + KLI + S + II+
Sbjct: 2294 ---FQPYLVFDVGDGSERRD--NDSYINVQEIKLVMEII-KLIKDKRKDVSFRNIGIITH 2347
Query: 652 YRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASD-KKSIGFLADY 710
Y+ Q Q+ + F + VD TVD QGR+KD I +CVRA+ + SIGFLA
Sbjct: 2348 YKAQKTMIQKDLDKEFDRKGPAEVD--TVDAFQGRQKDCVIVTCVRANSIQGSIGFLASL 2405
Query: 711 RRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRV-SKPY 759
+R+NV ITRAK S+ ++G TL E++HWN L++ A+K+ + + K Y
Sbjct: 2406 QRLNVTITRAKYSLFILGHLRTLMENQHWNQLIQDAQKRGAIIKTCDKNY 2455
Score = 95 (38.5 bits), Expect = 2.9e-47, Sum P(3) = 2.9e-47
Identities = 63/275 (22%), Positives = 113/275 (41%)
Query: 52 REVKDTYKDVDDYLATFEPLL----FEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGFH 107
R V + + DY F PL+ FE V + + + E + ++R +
Sbjct: 1731 RPVPVRFHNYGDYFNVFFPLMVLNTFETVAQEWLNSPNRENFYQLQVRK-FPADYIKYWE 1789
Query: 108 LPSVTYEADEVESISP--NDLLLLSKEEFKEGSTFPTTYAFALVEHCQANLLR-LRMYLA 164
E + + + P NDL+ L+ E E + + N ++ L Y +
Sbjct: 1790 FAVYLEECELAKQLYPKENDLVFLAPERINEEK-----------KDTERNDIQDLHEYHS 1838
Query: 165 GEVIHINKDAV----KSQRLLNIHSLITSSVSAVEKRLFSLKICSLSTIAREYLALRSVG 220
G V + +V K++ L+I + + + + + + I SL T R+ A+ +G
Sbjct: 1839 GYVHKFRRTSVMRNGKTECYLSIQTQENFPAN-LNELVNCIVISSLVTTQRKLKAMSLLG 1897
Query: 221 SL-PFKDLILSASEKSSGSQDQSWKIPGLLHEYIKENHNASQLEAI--------HEGLLR 271
S +L+ + ++D + Y+++ N Q +AI H +
Sbjct: 1898 SRNQLARAVLNPNPMDFCTKDLLTTTSERIIAYLRD-FNEDQKKAIETAYAMVKHSPSVA 1956
Query: 272 KAFVLIQGPPGTGKTQTILGLLSAILHATPARVHS 306
K LI GPPGTGK++TI+GLL +L + HS
Sbjct: 1957 K-ICLIHGPPGTGKSKTIVGLLYRLLTENQRKGHS 1990
Score = 54 (24.1 bits), Expect = 2.9e-47, Sum P(3) = 2.9e-47
Identities = 8/16 (50%), Positives = 15/16 (93%)
Query: 379 CAPSNSALDEIVLRLL 394
CAPSN+A+DE++ +++
Sbjct: 2006 CAPSNAAVDELMKKII 2021
Score = 37 (18.1 bits), Expect = 3.3e-41, Sum P(3) = 3.3e-41
Identities = 10/40 (25%), Positives = 18/40 (45%)
Query: 241 QSWKIPGLLHEYIKENHNASQLEAIHEGLLRKAFVLIQGP 280
+S I GLL+ + EN + +++ VL+ P
Sbjct: 1969 KSKTIVGLLYRLLTENQRKGHSDENSNAKIKQNRVLVCAP 2008
>UNIPROTKB|E1BAS6 [details] [associations]
symbol:SETX "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007623 "circadian rhythm" evidence=IEA] [GO:0006369
"termination of RNA polymerase II transcription" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
InterPro:IPR026121 GO:GO:0005737 GO:GO:0005654 GO:GO:0006302
GeneTree:ENSGT00580000081652 OMA:RLINHFE PANTHER:PTHR10887:SF15
EMBL:DAAA02032276 EMBL:DAAA02032274 EMBL:DAAA02032275
IPI:IPI00842535 Ensembl:ENSBTAT00000042924 Uniprot:E1BAS6
Length = 2662
Score = 472 (171.2 bits), Expect = 3.0e-47, Sum P(4) = 3.0e-47
Identities = 127/350 (36%), Positives = 186/350 (53%)
Query: 430 VEQKRDDSAAD-KQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHG----- 483
V ++R + A+ K+ G +K + S I+ E+ I+C TLS SG LL G
Sbjct: 2109 VSKERQELASKIKEVQGRPQKTQ----SIIILESHIICCTLSTSGGLLLEAAFRGQGGVP 2164
Query: 484 FDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQ 543
F VI+DEA Q+ E TL PL C ++ LVGDP QLP TVIS A+ GY S+ R
Sbjct: 2165 FSCVIVDEAGQSCEVETLTPLIHRCNKLVLVGDPKQLPPTVISVKAQDYGYDQSMMARFH 2224
Query: 544 RA----------G-YPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVE-DYTTRDWHE 591
+ G PV L QYRMHP++ FPS YD L E + DW
Sbjct: 2225 KLLEESVEHNMIGRLPVLQLTIQYRMHPDICLFPSSYIYDGILRTNRGTETSRCSSDWP- 2283
Query: 592 YRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISP 651
F P+ FD+ +G E + + S++N+ E+ V+ L KLI + + + II+
Sbjct: 2284 ---FQPYLVFDVGDGLERRD--NDSYVNVQEIKLVMELI-KLIKDKRRDVTFRNIGIITH 2337
Query: 652 YRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKK-SIGFLADY 710
Y+ Q Q+ + F + + ++ TVD QGR+KD I +CVRA+ + SIGFLA
Sbjct: 2338 YKAQKTMIQKDLDKEF--DRKGAAEVDTVDAFQGRQKDCVIVTCVRANATQGSIGFLASL 2395
Query: 711 RRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRV-SKPY 759
+R+NV ITRAK S+ ++G TL E++HW +L++ A+K+ + + K Y
Sbjct: 2396 QRLNVTITRAKYSLFILGHLRTLVENRHWYHLIQDAQKRGAIIKTCDKNY 2445
Score = 112 (44.5 bits), Expect = 3.0e-47, Sum P(4) = 3.0e-47
Identities = 76/315 (24%), Positives = 138/315 (43%)
Query: 17 FCKIILGWDYFRLVKESQERNDKN-SKKVDRGKLGLREVKDTYKDVDDYLATFEPLL--- 72
F K +L W Y V Q + + ++R ++ +R ++D DY F PL+
Sbjct: 1691 FVKEVLKWRYEMFVNFDQCGPPSSLCQSIER-RVPIR-----FQDCGDYFNVFFPLMVLN 1744
Query: 73 -FEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTY--EADEVESISP--NDLL 127
FE V + I ++E+ + LR G+ + V Y E + + + P NDL+
Sbjct: 1745 TFETVAQEWISSPNKEKFHQLHLRKFP--GDYKKYW-EFVVYLEECELAKQLHPRENDLV 1801
Query: 128 LLSKEEFKEGSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKD----AVKSQRLL-- 181
L E E ++ L + C+ + + V+H K ++++Q L
Sbjct: 1802 FLVPERLNEEKK-DLEWSH-LEDACEYYCGYVHKFRRTSVMHNGKFECSVSIQTQDNLPV 1859
Query: 182 NIHSLIT----SSVSAVEKRLFSLKICS-LSTIAREYLALRSVGSLPF--KDLILSASEK 234
N++ L+ SS+ +++L ++ + S + +AR A+ + + F KDL + SE+
Sbjct: 1860 NLNELVKCFVISSLVTTQRKLKAMSLLSGRNQLAR---AILNPNPMDFCTKDLPTATSER 1916
Query: 235 SSGSQDQSWKIPGLLHEYIKENHNASQLEAI---HEGLLRKAFVLIQGPPGTGKTQTILG 291
I L ++ ++ A + H + K LI GPPGTGK++TI+G
Sbjct: 1917 ----------IVAYLKDFNEDQKKAIETACAMVKHSPSVAK-ICLIHGPPGTGKSKTIVG 1965
Query: 292 LLSAILHATPARVHS 306
+L +L R +S
Sbjct: 1966 ILYRLLTENQRRGYS 1980
Score = 54 (24.1 bits), Expect = 3.0e-47, Sum P(4) = 3.0e-47
Identities = 8/16 (50%), Positives = 15/16 (93%)
Query: 379 CAPSNSALDEIVLRLL 394
CAPSN+A+DE++ +++
Sbjct: 1996 CAPSNAAVDELMKKII 2011
Score = 41 (19.5 bits), Expect = 3.0e-47, Sum P(4) = 3.0e-47
Identities = 9/35 (25%), Positives = 17/35 (48%)
Query: 9 QDEASIFRF---CKIILGWDYFRLVKESQERNDKN 40
+ ++ F F C++ W + K S + N+KN
Sbjct: 1073 ESDSQFFEFETPCEVFSVWHDQKPDKNSAQENEKN 1107
>UNIPROTKB|D4AEB3 [details] [associations]
symbol:Setx "Protein Setx" species:10116 "Rattus
norvegicus" [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] InterPro:IPR026121 RGD:1565575 GO:GO:0005737
GO:GO:0005654 GO:GO:0006302 KO:K10706 GeneTree:ENSGT00580000081652
CTD:23064 OMA:RLINHFE OrthoDB:EOG4XWFWX PANTHER:PTHR10887:SF15
IPI:IPI00476851 RefSeq:XP_342401.3 ProteinModelPortal:D4AEB3
PRIDE:D4AEB3 Ensembl:ENSRNOT00000017984 GeneID:362096
KEGG:rno:362096 NextBio:678646 ArrayExpress:D4AEB3 Uniprot:D4AEB3
Length = 2647
Score = 476 (172.6 bits), Expect = 4.6e-47, Sum P(3) = 4.6e-47
Identities = 130/350 (37%), Positives = 185/350 (52%)
Query: 427 DHLV-EQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHG-- 483
+H+V K A K K R R ++ I+ E+ ++C TLS SG LL G
Sbjct: 2091 EHIVIVSKERQELASKIKEVQGRPQR--AQNTIILESHVICCTLSTSGGLLLESAFRGQG 2148
Query: 484 ---FDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFK 540
F VI+DEA Q+ E TL PL C ++ LVGDP QLP TVIS A+ GY S+
Sbjct: 2149 GVPFSCVIVDEAGQSCEVETLSPLIHRCNKLVLVGDPKQLPPTVISMKAQEYGYDQSMMA 2208
Query: 541 RLQRA----------G-YPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDW 589
R + G PV L QYRMHP++ FPS Y++ L+ E T R
Sbjct: 2209 RFCKLLEENVEQNMIGRLPVLQLTIQYRMHPDICLFPSNYVYNKNLKTNRLTE--TIRCS 2266
Query: 590 HEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAII 649
E+ F P+ FD+ +G E + + S+IN+ E+ V+ + KLI + S + II
Sbjct: 2267 SEWP-FQPYLVFDVGDGSEQRD--NDSYINVQEIKLVMEII-KLIKEKRKDISFRNIGII 2322
Query: 650 SPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKK-SIGFLA 708
+ Y+ Q Q+ ++ F + VD TVD QGR+KD I +CVRAS + SIGFLA
Sbjct: 2323 THYKAQKTMIQKDLEKEFDKKGPAEVD--TVDAFQGRQKDCIIVTCVRASAVQGSIGFLA 2380
Query: 709 DYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRVSKP 758
+R+NV ITRAK S+ ++G TL E++HW L++ A+K+ + + P
Sbjct: 2381 SLQRLNVTITRAKYSLFILGHLRTLMENQHWYELIQDAQKRGAIIKTCDP 2430
Score = 102 (41.0 bits), Expect = 4.6e-47, Sum P(3) = 4.6e-47
Identities = 72/311 (23%), Positives = 130/311 (41%)
Query: 13 SIF-RFCKIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPL 71
SIF F K +L W Y + DK + R V ++D +Y F PL
Sbjct: 1678 SIFDTFIKEVLKWKYQMFLNF-----DKCGAPTSLCQSISRPVPVRFQDCAEYFNVFLPL 1732
Query: 72 L----FEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADEVESISP--ND 125
+ FE V + + ++E + LR + E++ + + P ND
Sbjct: 1733 IILNAFETVAQEWLNSPNKENFYQLHLRK-FPADYKKYWEFLIYLEESELAKQLHPKEND 1791
Query: 126 LLLL--SKEEFKEGSTFPTTYAFALVEHC--QANLLRLRMYLAGEVIHINKDAVKSQRLL 181
L+ L K+ S ++ + H + +++R I + S + L
Sbjct: 1792 LVFLVPEKKYMDRHSVQDRSHYYCGYVHKFRRTSVMRSGKTECSLCIQTQDNMPASVKEL 1851
Query: 182 NIHSLITSSVSAVEKRLFSLKICS-LSTIAREYLALRSVGSLPF--KDLILSASEKSSGS 238
++ SS+ +++L ++ + S + +AR A+ + + F KDL+ + SE+
Sbjct: 1852 T-KCIVISSLVTTQRKLKAMSLLSGRNQLAR---AVLNPNPMDFCTKDLLTTTSER---- 1903
Query: 239 QDQSWKIPGLLHEYIKENHNASQLE-AI--HEGLLRKAFVLIQGPPGTGKTQTILGLLSA 295
I L ++ ++ A + A+ H + K LI GPPGTGK++TI+GLL
Sbjct: 1904 ------IIAYLKDFNEDQKKAIETAYAMVKHSPSVAK-ICLIHGPPGTGKSKTIVGLLYR 1956
Query: 296 ILHATPARVHS 306
+L + + HS
Sbjct: 1957 LLTESQRKGHS 1967
Score = 54 (24.1 bits), Expect = 4.6e-47, Sum P(3) = 4.6e-47
Identities = 8/16 (50%), Positives = 15/16 (93%)
Query: 379 CAPSNSALDEIVLRLL 394
CAPSN+A+DE++ +++
Sbjct: 1983 CAPSNAAVDELMKKII 1998
Score = 37 (18.1 bits), Expect = 2.7e-40, Sum P(3) = 2.7e-40
Identities = 7/25 (28%), Positives = 15/25 (60%)
Query: 70 PLLFEEVKAQIIQKKDEEEV-QEWK 93
P+ FE+ ++Q+ + + EV W+
Sbjct: 1056 PIEFEDSESQVFEFESSSEVFSVWQ 1080
>ASPGD|ASPL0000056713 [details] [associations]
symbol:AN0646 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
InterPro:IPR003593 InterPro:IPR018999 Pfam:PF09416 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:BN001308 GO:GO:0003677
GO:GO:0008270 GO:GO:0016567 GO:GO:0030466 GO:GO:0004386
GO:GO:0008298 InterPro:IPR014001 SMART:SM00487 GO:GO:0070478
HOGENOM:HOG000205990 OMA:MFYEGSL ProteinModelPortal:C8VS08
EnsemblFungi:CADANIAT00002030 Uniprot:C8VS08
Length = 1077
Score = 477 (173.0 bits), Expect = 5.4e-46, Sum P(2) = 5.4e-46
Identities = 136/435 (31%), Positives = 215/435 (49%)
Query: 379 CAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR--IG-LKAHHSV----NSVAIDHLVE 431
CAPSN A+D++ R+ TG++ + + + + V +G L H V +++ + L +
Sbjct: 473 CAPSNVAVDQLCERIHRTGLKTVRVTAKSREDVESPVGFLSLHEQVRLNDSNIELIKLNQ 532
Query: 432 QKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDE 491
K + Q ++ + ILN A ++C T +G L+KL F V+IDE
Sbjct: 533 LKSELGELSSQDEKRLKQLTRAAEREILNNADVICCTCVGAGDPRLAKLK--FRTVLIDE 590
Query: 492 AAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGY-PVK 550
+ Q+ EP ++PL GCKQV LVGD QL +++ A G SLF+RL G P++
Sbjct: 591 STQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVILGCSPIR 650
Query: 551 MLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR--DWHEYRCFGPFSFFDIHEGKE 608
L QYRMHP + FPS FY+ +L++G D R D+ P F+ + G E
Sbjct: 651 -LNVQYRMHPCLSEFPSNMFYEGSLQNGITSFDRLRREVDFPWPILDSPMMFWS-NLGNE 708
Query: 609 SQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKET-- 666
A S++N E V + + Q K + II+PY Q + T
Sbjct: 709 EISASGTSYLNRTEAANVEKIVTRFFKAGVQPKD---IGIITPYEGQRSYIVSSMQATGT 765
Query: 667 FGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILV 726
F E K +++ +VD QGREKD I SCVR++D + IGFL+D RR+NV +TRAK +++
Sbjct: 766 FKKEHYKEIEVASVDAFQGREKDFIILSCVRSNDHQGIGFLSDPRRLNVALTRAKYGLVI 825
Query: 727 VGCASTLREDKHWNNLVKSAEK------------QDCLFRVSKPYASFFSDENLESMRK- 773
+G L + WN L++ ++ Q+ L + S+P ++ + +
Sbjct: 826 LGNPKVLSKHPLWNCLLQHFKERHTLVEGPLSNLQESLIQFSRPKQAYRGPQRFQMAYNH 885
Query: 774 --NATTDNVQGADGH 786
N T+ + G +GH
Sbjct: 886 VSNVTSGFMNGRNGH 900
Score = 84 (34.6 bits), Expect = 5.4e-46, Sum P(2) = 5.4e-46
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 258 NASQLEAIHEGLLRKAFVLIQGPPGTGKTQT 288
N SQ+ A+ + +L++ LIQGPPGTGKT T
Sbjct: 425 NGSQINAV-KSVLQRPLSLIQGPPGTGKTVT 454
>TAIR|locus:2171007 [details] [associations]
symbol:LBA1 "LOW-LEVEL BETA-AMYLASE 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM;IDA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0010182 "sugar mediated signaling pathway"
evidence=RCA;IMP] [GO:0016246 "RNA interference" evidence=IGI]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IMP] [GO:0005829 "cytosol" evidence=IDA;RCA]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0042742 "defense
response to bacterium" evidence=IMP] [GO:0009755 "hormone-mediated
signaling pathway" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0000932 "cytoplasmic mRNA processing
body" evidence=IDA] [GO:0009744 "response to sucrose stimulus"
evidence=IGI] InterPro:IPR018999 Pfam:PF09416 GO:GO:0005829
GO:GO:0005886 GO:GO:0009506 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0016246 GO:GO:0000184 GO:GO:0046872
GO:GO:0003677 GO:GO:0009744 GO:GO:0008270 GO:GO:0010182
GO:GO:0004386 GO:GO:0000932 eggNOG:COG1112 InterPro:IPR014001
PROSITE:PS51192 EMBL:AB013394 HOGENOM:HOG000205990 KO:K14326
OMA:MFYEGSL EMBL:AF484122 IPI:IPI00541997 RefSeq:NP_199512.2
UniGene:At.8584 ProteinModelPortal:Q9FJR0 SMR:Q9FJR0 STRING:Q9FJR0
PaxDb:Q9FJR0 PRIDE:Q9FJR0 EnsemblPlants:AT5G47010.1 GeneID:834747
KEGG:ath:AT5G47010 GeneFarm:2422 TAIR:At5g47010 InParanoid:Q9FJR0
PhylomeDB:Q9FJR0 ProtClustDB:CLSN2680462 Genevestigator:Q9FJR0
GermOnline:AT5G47010 Uniprot:Q9FJR0
Length = 1254
Score = 475 (172.3 bits), Expect = 6.4e-46, Sum P(4) = 6.4e-46
Identities = 130/393 (33%), Positives = 204/393 (51%)
Query: 379 CAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIG---LKAHHSVNSVAID-----HLV 430
CAPSN A+D++ ++ TG++ + + + + V L H+ V + H +
Sbjct: 538 CAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEYLTLHYQVRHLDTSEKSELHKL 597
Query: 431 EQKRDD----SAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDV 486
+Q +D+ S++D++K+ ++ + I A ++C T G+A L N F
Sbjct: 598 QQLKDEQGELSSSDEKKYKNLKR---ATEREITQSADVICCTCV--GAADLRLSNFRFRQ 652
Query: 487 VIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAG 546
V+IDE+ QA EP L+PL G KQV LVGD QL ++ A G SLF+RL G
Sbjct: 653 VLIDESTQATEPECLIPLVLGVKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVTLG 712
Query: 547 Y-PVKMLKTQYRMHPEVRSFPSREFYDEALEDG-SDVEDYTTRDWHEYRCFGPFSFFDIH 604
P++ L+ QYRMHP + FPS FY+ L++G + +E TT + FF +
Sbjct: 713 IKPIR-LQVQYRMHPALSEFPSNSFYEGTLQNGVTIIERQTTGIDFPWPVPNRPMFFYVQ 771
Query: 605 EGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSS---SQLAIISPYRHQVKQFQE 661
G+E A S++N E V KL++ + LKS SQ+ +I+PY Q
Sbjct: 772 LGQEEISASGTSYLNRTEAANV----EKLVTAF--LKSGVVPSQIGVITPYEGQRAYIVN 825
Query: 662 RFKETFGVESQ--KVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITR 719
+ Q K +++ +VD QGREKD I SCVR+++ + IGFL D RR+NV +TR
Sbjct: 826 YMARNGSLRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTR 885
Query: 720 AKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
A+ I+++G L + WN L+ ++ +CL
Sbjct: 886 ARYGIVILGNPKVLSKQPLWNGLLTHYKEHECL 918
Score = 90 (36.7 bits), Expect = 6.4e-46, Sum P(4) = 6.4e-46
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 258 NASQLEAIHEGLLRKAFVLIQGPPGTGKTQT 288
NASQ+ A+ + +L+K LIQGPPGTGKT T
Sbjct: 490 NASQVNAV-KSVLQKPISLIQGPPGTGKTVT 519
Score = 42 (19.8 bits), Expect = 6.4e-46, Sum P(4) = 6.4e-46
Identities = 6/11 (54%), Positives = 7/11 (63%)
Query: 785 GHVPHDDETMH 795
GH+PH T H
Sbjct: 1048 GHLPHQQATQH 1058
Score = 39 (18.8 bits), Expect = 6.4e-46, Sum P(4) = 6.4e-46
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 17 FCKII-LGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTY 58
F +I L DY +++KESQ K + V R +GL + + Y
Sbjct: 325 FAPLIKLEADYDKMMKESQS---KENLTV-RWDIGLNKKRVAY 363
Score = 38 (18.4 bits), Expect = 8.1e-46, Sum P(4) = 8.1e-46
Identities = 9/35 (25%), Positives = 16/35 (45%)
Query: 54 VKDTYKDVDDYLATFEPLLFEEVKAQIIQKKDEEE 88
V+ Y+D Y F PL+ E + K+ + +
Sbjct: 311 VQPKYEDAYQYQNVFAPLIKLEADYDKMMKESQSK 345
Score = 37 (18.1 bits), Expect = 1.9e-40, Sum P(3) = 1.9e-40
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 379 CAPSNSALDEIVLRLLNTGIRD 400
C +S L E +L N G R+
Sbjct: 188 CLHRDSPLGETILECYNCGCRN 209
>CGD|CAL0003666 [details] [associations]
symbol:NAM7 species:5476 "Candida albicans" [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=ISS] [GO:0005829 "cytosol" evidence=IEA]
[GO:0030466 "chromatin silencing at silent mating-type cassette"
evidence=IEA] [GO:0070478 "nuclear-transcribed mRNA catabolic
process, 3'-5' exonucleolytic nonsense-mediated decay"
evidence=IEA] [GO:0008298 "intracellular mRNA localization"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR003593 InterPro:IPR018999 Pfam:PF09416 SMART:SM00382
CGD:CAL0003666 GO:GO:0005524 GO:GO:0005737 GO:GO:0000184
GO:GO:0003677 GO:GO:0008270 GO:GO:0004386 eggNOG:COG1112
InterPro:IPR014001 SMART:SM00487 EMBL:AACQ01000063
EMBL:AACQ01000062 KO:K14326 RefSeq:XP_716778.1 RefSeq:XP_716838.1
ProteinModelPortal:Q5A507 SMR:Q5A507 STRING:Q5A507 GeneID:3641489
GeneID:3641540 KEGG:cal:CaO19.8554 KEGG:cal:CaO19.939
Uniprot:Q5A507
Length = 1019
Score = 478 (173.3 bits), Expect = 1.0e-45, Sum P(2) = 1.0e-45
Identities = 139/393 (35%), Positives = 208/393 (52%)
Query: 379 CAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIG---LKAHHSVNSVA---IDHLVEQ 432
CAPSN A+D + +L G+ + + + + V L H+ VNS A + L++
Sbjct: 490 CAPSNVAVDHLAAKLDLLGLNVVRLTAKSREDVESSVSHLALHNLVNSNAKGELKKLIKL 549
Query: 433 KR---DDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVII 489
K + S AD + + R S +LN+A +VC T + LS+ F V+I
Sbjct: 550 KNQVGELSVADTNNY--LKLSRSS-EMKVLNKAEVVCCTCVGAADRRLSQFR--FKTVLI 604
Query: 490 DEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGY-P 548
DE+ QA EP L+P+ G KQV LVGD QL ++ A G SLF+RL G+ P
Sbjct: 605 DESTQASEPEVLIPIVKGAKQVILVGDHQQLGPVILDKKAADAGLKQSLFERLVFLGHVP 664
Query: 549 VKMLKTQYRMHPEVRSFPSREFYDEALEDG--SD---VEDYTTRDWHEYRCFGPFSFFDI 603
++ L+ QYRMHP + FPS FY+ +L++G SD +E+ +T W P F+
Sbjct: 665 IR-LEVQYRMHPCLSEFPSNMFYEGSLQNGVTSDDRLIEE-STFPWPVIDT--PMMFW-A 719
Query: 604 HEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQ---VKQFQ 660
+ G+E A S++N E V + KL +K Q+ +I+PY Q + QF
Sbjct: 720 NYGREELSASGNSYLNRVEAMNVEKIITKLFK--DGIKPE-QIGVITPYEGQRAYLVQFM 776
Query: 661 ERFKETFGVESQKV-VDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITR 719
Q + V+IT+VD QGREKD I SCVRA+D +SIGFL+D RR+NV +TR
Sbjct: 777 SVNSTLLDKRDQYLNVEITSVDAFQGREKDFIILSCVRANDSQSIGFLSDPRRLNVALTR 836
Query: 720 AKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
AK ++++G +L ++ WN+L+ ++ CL
Sbjct: 837 AKYGLVILGNPRSLCRNRLWNHLLIHFREKGCL 869
Score = 79 (32.9 bits), Expect = 1.0e-45, Sum P(2) = 1.0e-45
Identities = 17/31 (54%), Positives = 21/31 (67%)
Query: 258 NASQLEAIHEGLLRKAFVLIQGPPGTGKTQT 288
N SQ A+ +L++ LIQGPPGTGKT T
Sbjct: 442 NVSQTNAVRT-VLQRPLSLIQGPPGTGKTVT 471
>UNIPROTKB|Q5A507 [details] [associations]
symbol:NAM7 "Putative uncharacterized protein NAM7"
species:237561 "Candida albicans SC5314" [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=ISS] InterPro:IPR003593 InterPro:IPR018999
Pfam:PF09416 SMART:SM00382 CGD:CAL0003666 GO:GO:0005524
GO:GO:0005737 GO:GO:0000184 GO:GO:0003677 GO:GO:0008270
GO:GO:0004386 eggNOG:COG1112 InterPro:IPR014001 SMART:SM00487
EMBL:AACQ01000063 EMBL:AACQ01000062 KO:K14326 RefSeq:XP_716778.1
RefSeq:XP_716838.1 ProteinModelPortal:Q5A507 SMR:Q5A507
STRING:Q5A507 GeneID:3641489 GeneID:3641540 KEGG:cal:CaO19.8554
KEGG:cal:CaO19.939 Uniprot:Q5A507
Length = 1019
Score = 478 (173.3 bits), Expect = 1.0e-45, Sum P(2) = 1.0e-45
Identities = 139/393 (35%), Positives = 208/393 (52%)
Query: 379 CAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIG---LKAHHSVNSVA---IDHLVEQ 432
CAPSN A+D + +L G+ + + + + V L H+ VNS A + L++
Sbjct: 490 CAPSNVAVDHLAAKLDLLGLNVVRLTAKSREDVESSVSHLALHNLVNSNAKGELKKLIKL 549
Query: 433 KR---DDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVII 489
K + S AD + + R S +LN+A +VC T + LS+ F V+I
Sbjct: 550 KNQVGELSVADTNNY--LKLSRSS-EMKVLNKAEVVCCTCVGAADRRLSQFR--FKTVLI 604
Query: 490 DEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGY-P 548
DE+ QA EP L+P+ G KQV LVGD QL ++ A G SLF+RL G+ P
Sbjct: 605 DESTQASEPEVLIPIVKGAKQVILVGDHQQLGPVILDKKAADAGLKQSLFERLVFLGHVP 664
Query: 549 VKMLKTQYRMHPEVRSFPSREFYDEALEDG--SD---VEDYTTRDWHEYRCFGPFSFFDI 603
++ L+ QYRMHP + FPS FY+ +L++G SD +E+ +T W P F+
Sbjct: 665 IR-LEVQYRMHPCLSEFPSNMFYEGSLQNGVTSDDRLIEE-STFPWPVIDT--PMMFW-A 719
Query: 604 HEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQ---VKQFQ 660
+ G+E A S++N E V + KL +K Q+ +I+PY Q + QF
Sbjct: 720 NYGREELSASGNSYLNRVEAMNVEKIITKLFK--DGIKPE-QIGVITPYEGQRAYLVQFM 776
Query: 661 ERFKETFGVESQKV-VDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITR 719
Q + V+IT+VD QGREKD I SCVRA+D +SIGFL+D RR+NV +TR
Sbjct: 777 SVNSTLLDKRDQYLNVEITSVDAFQGREKDFIILSCVRANDSQSIGFLSDPRRLNVALTR 836
Query: 720 AKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
AK ++++G +L ++ WN+L+ ++ CL
Sbjct: 837 AKYGLVILGNPRSLCRNRLWNHLLIHFREKGCL 869
Score = 79 (32.9 bits), Expect = 1.0e-45, Sum P(2) = 1.0e-45
Identities = 17/31 (54%), Positives = 21/31 (67%)
Query: 258 NASQLEAIHEGLLRKAFVLIQGPPGTGKTQT 288
N SQ A+ +L++ LIQGPPGTGKT T
Sbjct: 442 NVSQTNAVRT-VLQRPLSLIQGPPGTGKTVT 471
>MGI|MGI:107995 [details] [associations]
symbol:Upf1 "UPF1 regulator of nonsense transcripts homolog
(yeast)" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA
catabolic process, nonsense-mediated decay" evidence=ISO]
[GO:0000785 "chromatin" evidence=ISO] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=ISO]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISO] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006260 "DNA replication" evidence=ISO]
[GO:0006281 "DNA repair" evidence=ISO] [GO:0006449 "regulation of
translational termination" evidence=ISO] [GO:0007049 "cell cycle"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0009048 "dosage compensation by inactivation of X chromosome"
evidence=IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0035145 "exon-exon junction complex" evidence=ISO] [GO:0044530
"supraspliceosomal complex" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0071044 "histone mRNA catabolic process"
evidence=ISO] InterPro:IPR018999 Pfam:PF09416 MGI:MGI:107995
GO:GO:0005524 GO:GO:0000184 GO:GO:0046872 GO:GO:0003677
GO:GO:0006260 GO:GO:0008270 GO:GO:0006281 GO:GO:0000785
GO:GO:0003682 GO:GO:0003723 GO:GO:0007049 GO:GO:0000932
eggNOG:COG1112 GO:GO:0071044 GO:GO:0009048 GO:GO:0004004
GO:GO:0035145 GO:GO:0006449 GeneTree:ENSGT00550000074391
HOGENOM:HOG000205990 KO:K14326 OMA:MFYEGSL CTD:5976
HOVERGEN:HBG061556 ChiTaRS:UPF1 EMBL:AF322655 EMBL:AY597039
EMBL:AY597038 EMBL:AK148196 EMBL:BC030916 EMBL:BC052149
EMBL:BC056442 EMBL:AF182947 IPI:IPI00420949 IPI:IPI00850525
RefSeq:NP_001116301.1 RefSeq:NP_109605.2 UniGene:Mm.390048
ProteinModelPortal:Q9EPU0 SMR:Q9EPU0 STRING:Q9EPU0
PhosphoSite:Q9EPU0 PaxDb:Q9EPU0 PRIDE:Q9EPU0
Ensembl:ENSMUST00000075666 GeneID:19704 KEGG:mmu:19704
UCSC:uc009mab.2 UCSC:uc012gfa.1 InParanoid:Q9EPU0 OrthoDB:EOG4P8FH8
NextBio:297078 Bgee:Q9EPU0 Genevestigator:Q9EPU0
GermOnline:ENSMUSG00000058301 Uniprot:Q9EPU0
Length = 1124
Score = 480 (174.0 bits), Expect = 1.6e-45, Sum P(2) = 1.6e-45
Identities = 125/390 (32%), Positives = 217/390 (55%)
Query: 379 CAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIG---LKAHHSVNSV-AIDHL--VEQ 432
CAPSN A+D++ ++ TG++ + + + + + L H+ + ++ ++ L ++Q
Sbjct: 526 CAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQ 585
Query: 433 KRDD----SAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVI 488
+D+ S+AD++++ A ++ + R ++N VI C+ + +G L+K+ F ++
Sbjct: 586 LKDETGELSSADEKRYRALKRTAE--RELLMNADVICCTCVG-AGDPRLAKMQ--FRSIL 640
Query: 489 IDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGY- 547
IDE+ QA EP +VP+ G KQ+ LVGD QL V+ A G SLF+RL G
Sbjct: 641 IDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIR 700
Query: 548 PVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFS--FFDIHE 605
P++ L+ QYRMHP + +FPS FY+ +L++G D + + +++ P FF + +
Sbjct: 701 PIR-LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGF-DFQWPQPDKPMFFYVTQ 758
Query: 606 GKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQ---VKQFQER 662
G+E + S++N E V + KL+ + Q+ II+PY Q + Q+ +
Sbjct: 759 GQEEIASSGTSYLNRTEAANVEKITTKLLKAGAK---PDQIGIITPYEGQRSYLVQYMQ- 814
Query: 663 FKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKS 722
F + + + V+I +VD QGREKD I SCVRA++ + IGFL D RR+NV +TRA+
Sbjct: 815 FSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARY 874
Query: 723 SILVVGCASTLREDKHWNNLVKSAEKQDCL 752
+++VG L + WN+L+ ++Q L
Sbjct: 875 GVIIVGNPKALSKQPLWNHLLSYYKEQKAL 904
Score = 77 (32.2 bits), Expect = 1.6e-45, Sum P(2) = 1.6e-45
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 258 NASQLEAIHEGLLRKAFVLIQGPPGTGKTQT 288
N SQ+ A+ + +L++ LIQGPPGTGKT T
Sbjct: 478 NHSQVYAV-KTVLQRPLSLIQGPPGTGKTVT 507
>UNIPROTKB|E1C0J4 [details] [associations]
symbol:UPF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR018999 Pfam:PF09416 GO:GO:0005524 GO:GO:0005737
GO:GO:0000184 GO:GO:0003677 GO:GO:0008270 GO:GO:0004386
GeneTree:ENSGT00550000074391 EMBL:AADN02071779 IPI:IPI00598917
Ensembl:ENSGALT00000005099 NextBio:20823079 ArrayExpress:E1C0J4
Uniprot:E1C0J4
Length = 1117
Score = 479 (173.7 bits), Expect = 2.0e-45, Sum P(2) = 2.0e-45
Identities = 125/390 (32%), Positives = 217/390 (55%)
Query: 379 CAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIG---LKAHHSVNSV-AIDHL--VEQ 432
CAPSN A+D++ ++ TG++ + + + + + L H+ + ++ ++ L ++Q
Sbjct: 519 CAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQ 578
Query: 433 KRDD----SAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVI 488
+D+ S+AD++++ A ++ + R ++N VI C+ + +G L+K+ F ++
Sbjct: 579 LKDETGELSSADEKRYRALKRTAE--RELLMNADVICCTCVG-AGDPRLAKMQ--FRSIL 633
Query: 489 IDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGY- 547
IDE+ QA EP +VP+ G KQ+ LVGD QL V+ A G SLF+RL G
Sbjct: 634 IDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIR 693
Query: 548 PVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFS--FFDIHE 605
P++ L+ QYRMHP + +FPS FY+ +L++G D + + +++ P FF + +
Sbjct: 694 PIR-LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGF-DFQWPQPDKPMFFYVTQ 751
Query: 606 GKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQ---VKQFQER 662
G+E + S++N E V + KL+ + Q+ II+PY Q + Q+ +
Sbjct: 752 GQEEIASSGTSYLNRTEAANVEKITTKLLKAGAK---PDQIGIITPYEGQRSYLVQYMQ- 807
Query: 663 FKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKS 722
F + + + V+I +VD QGREKD I SCVRA++ + IGFL D RR+NV +TRA+
Sbjct: 808 FSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARY 867
Query: 723 SILVVGCASTLREDKHWNNLVKSAEKQDCL 752
+++VG L + WN+L+ ++Q L
Sbjct: 868 GVIIVGNPKALSKQPLWNHLLNYYKEQKVL 897
Score = 77 (32.2 bits), Expect = 2.0e-45, Sum P(2) = 2.0e-45
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 258 NASQLEAIHEGLLRKAFVLIQGPPGTGKTQT 288
N SQ+ A+ + +L++ LIQGPPGTGKT T
Sbjct: 471 NHSQVYAV-KTVLQRPLSLIQGPPGTGKTVT 500
>UNIPROTKB|G4ND47 [details] [associations]
symbol:MGG_00976 "Regulator-nonsense transcripts 1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR018999 Pfam:PF09416
GO:GO:0005524 GO:GO:0005737 EMBL:CM001235 GO:GO:0003677
GO:GO:0008270 GO:GO:0016567 GO:GO:0030466 GO:GO:0004386
GO:GO:0008298 InterPro:IPR014001 SMART:SM00487 GO:GO:0070478
KO:K14326 RefSeq:XP_003717973.1 ProteinModelPortal:G4ND47
SMR:G4ND47 EnsemblFungi:MGG_00976T0 GeneID:2674784
KEGG:mgr:MGG_00976 Uniprot:G4ND47
Length = 1105
Score = 476 (172.6 bits), Expect = 2.1e-45, Sum P(2) = 2.1e-45
Identities = 127/392 (32%), Positives = 201/392 (51%)
Query: 379 CAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIG---LKAHHSVNS-------VAIDH 428
CAPSN A+D++ R+ TG++ + + + + V L H V +
Sbjct: 501 CAPSNVAVDQLCERVHRTGLKVVRLTAKSREDVESSVSFLALHEQVRMNDTNPELAKLQQ 560
Query: 429 LVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVI 488
L + + S+ D++K K + IL+ A +VC T +G L+KL F V+
Sbjct: 561 LKSELGELSSQDEKKFKQLTK---AAEREILSNADVVCCTCVGAGDPRLAKLK--FRNVL 615
Query: 489 IDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGY- 547
IDE+ Q+ EP ++PL GCKQV LVGD QL +++ A G SLF+RL + G
Sbjct: 616 IDESTQSAEPECMIPLVLGCKQVVLVGDHKQLGPVIMNKKAAKAGLNQSLFERLVKLGLT 675
Query: 548 PVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRD----WHEYRCFGPFSFFDI 603
P++ L QYRMHP + FPS FY+ +L++G ++ RD W P F+
Sbjct: 676 PIR-LNVQYRMHPCLSEFPSNMFYEGSLQNGVTIQQRLRRDVDFPWPVADM--PMMFWS- 731
Query: 604 HEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLK-SSSQLAIISPYRHQVKQFQER 662
+ G E A S++N E V KL++ + + + +++PY Q
Sbjct: 732 NLGNEEISASGTSYLNRTEASNV----EKLVTRFFKAGVKPGDIGVVTPYEGQRSYIVST 787
Query: 663 FKET--FGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRA 720
+ T F ES K V++ +VD QGREKD + SCVR+++ + IGFL+D RR+NV +TRA
Sbjct: 788 MQNTGTFKKESYKEVEVASVDAFQGREKDFIVLSCVRSNESQGIGFLSDPRRLNVALTRA 847
Query: 721 KSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
K ++++G L + + W++L+ + CL
Sbjct: 848 KYGVVIIGNPKVLSKHELWHHLLIHFRDRKCL 879
Score = 80 (33.2 bits), Expect = 2.1e-45, Sum P(2) = 2.1e-45
Identities = 18/31 (58%), Positives = 21/31 (67%)
Query: 258 NASQLEAIHEGLLRKAFVLIQGPPGTGKTQT 288
N SQ+ AI + +L LIQGPPGTGKT T
Sbjct: 453 NGSQISAI-KAVLSTPLSLIQGPPGTGKTVT 482
Score = 37 (18.1 bits), Expect = 6.9e-41, Sum P(2) = 6.9e-41
Identities = 7/25 (28%), Positives = 13/25 (52%)
Query: 384 SALDEIVLRLLNTGIRDENIRSYTP 408
S L + +L N G+R+ + + P
Sbjct: 150 STLGDTILECYNCGVRNVFLLGFIP 174
>UNIPROTKB|E1BEK9 [details] [associations]
symbol:UPF1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071044 "histone mRNA catabolic process" evidence=IEA]
[GO:0044530 "supraspliceosomal complex" evidence=IEA] [GO:0035145
"exon-exon junction complex" evidence=IEA] [GO:0009048 "dosage
compensation by inactivation of X chromosome" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0000785
"chromatin" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA] InterPro:IPR018999
Pfam:PF09416 GO:GO:0005524 GO:GO:0005737 GO:GO:0000184
GO:GO:0003677 GO:GO:0006260 GO:GO:0008270 GO:GO:0006281
GO:GO:0000785 GO:GO:0003682 GO:GO:0007049 GO:GO:0071044
GO:GO:0009048 GO:GO:0004004 GO:GO:0035145
GeneTree:ENSGT00550000074391 OMA:MFYEGSL EMBL:DAAA02019036
IPI:IPI00685259 Ensembl:ENSBTAT00000027868 Uniprot:E1BEK9
Length = 1127
Score = 479 (173.7 bits), Expect = 2.1e-45, Sum P(2) = 2.1e-45
Identities = 125/390 (32%), Positives = 217/390 (55%)
Query: 379 CAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIG---LKAHHSVNSV-AIDHL--VEQ 432
CAPSN A+D++ ++ TG++ + + + + + L H+ + ++ ++ L ++Q
Sbjct: 529 CAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQ 588
Query: 433 KRDD----SAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVI 488
+D+ S+AD++++ A ++ + R ++N VI C+ + +G L+K+ F ++
Sbjct: 589 LKDETGELSSADEKRYRALKRTAE--RELLMNADVICCTCVG-AGDPRLAKMQ--FRSIL 643
Query: 489 IDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGY- 547
IDE+ QA EP +VP+ G KQ+ LVGD QL V+ A G SLF+RL G
Sbjct: 644 IDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIR 703
Query: 548 PVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFS--FFDIHE 605
P++ L+ QYRMHP + +FPS FY+ +L++G D + + +++ P FF + +
Sbjct: 704 PIR-LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGF-DFQWPQPDKPMFFYVTQ 761
Query: 606 GKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQ---VKQFQER 662
G+E + S++N E V + KL+ + Q+ II+PY Q + Q+ +
Sbjct: 762 GQEEIASSGTSYLNRTEAANVEKITTKLLKAGAK---PDQIGIITPYEGQRSYLVQYMQ- 817
Query: 663 FKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKS 722
F + + + V+I +VD QGREKD I SCVRA++ + IGFL D RR+NV +TRA+
Sbjct: 818 FSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARY 877
Query: 723 SILVVGCASTLREDKHWNNLVKSAEKQDCL 752
+++VG L + WN+L+ ++Q L
Sbjct: 878 GVIIVGNPKALSKQPLWNHLLNYYKEQKVL 907
Score = 77 (32.2 bits), Expect = 2.1e-45, Sum P(2) = 2.1e-45
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 258 NASQLEAIHEGLLRKAFVLIQGPPGTGKTQT 288
N SQ+ A+ + +L++ LIQGPPGTGKT T
Sbjct: 481 NHSQVYAV-KTVLQRPLSLIQGPPGTGKTVT 510
>UNIPROTKB|E1C0J3 [details] [associations]
symbol:UPF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0000785 "chromatin" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IEA] [GO:0006260 "DNA replication"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0009048 "dosage compensation by
inactivation of X chromosome" evidence=IEA] [GO:0035145 "exon-exon
junction complex" evidence=IEA] [GO:0044530 "supraspliceosomal
complex" evidence=IEA] [GO:0071044 "histone mRNA catabolic process"
evidence=IEA] InterPro:IPR018999 Pfam:PF09416 GO:GO:0005524
GO:GO:0005737 GO:GO:0000184 GO:GO:0003677 GO:GO:0006260
GO:GO:0008270 GO:GO:0006281 GO:GO:0000785 GO:GO:0003682
GO:GO:0007049 GO:GO:0071044 GO:GO:0009048 GO:GO:0004004
GO:GO:0035145 GeneTree:ENSGT00550000074391 OMA:MFYEGSL
EMBL:AADN02071779 IPI:IPI00571950 Ensembl:ENSGALT00000005101
ArrayExpress:E1C0J3 Uniprot:E1C0J3
Length = 1128
Score = 479 (173.7 bits), Expect = 2.1e-45, Sum P(2) = 2.1e-45
Identities = 125/390 (32%), Positives = 217/390 (55%)
Query: 379 CAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIG---LKAHHSVNSV-AIDHL--VEQ 432
CAPSN A+D++ ++ TG++ + + + + + L H+ + ++ ++ L ++Q
Sbjct: 530 CAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQ 589
Query: 433 KRDD----SAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVI 488
+D+ S+AD++++ A ++ + R ++N VI C+ + +G L+K+ F ++
Sbjct: 590 LKDETGELSSADEKRYRALKRTAE--RELLMNADVICCTCVG-AGDPRLAKMQ--FRSIL 644
Query: 489 IDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGY- 547
IDE+ QA EP +VP+ G KQ+ LVGD QL V+ A G SLF+RL G
Sbjct: 645 IDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIR 704
Query: 548 PVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFS--FFDIHE 605
P++ L+ QYRMHP + +FPS FY+ +L++G D + + +++ P FF + +
Sbjct: 705 PIR-LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGF-DFQWPQPDKPMFFYVTQ 762
Query: 606 GKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQ---VKQFQER 662
G+E + S++N E V + KL+ + Q+ II+PY Q + Q+ +
Sbjct: 763 GQEEIASSGTSYLNRTEAANVEKITTKLLKAGAK---PDQIGIITPYEGQRSYLVQYMQ- 818
Query: 663 FKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKS 722
F + + + V+I +VD QGREKD I SCVRA++ + IGFL D RR+NV +TRA+
Sbjct: 819 FSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARY 878
Query: 723 SILVVGCASTLREDKHWNNLVKSAEKQDCL 752
+++VG L + WN+L+ ++Q L
Sbjct: 879 GVIIVGNPKALSKQPLWNHLLNYYKEQKVL 908
Score = 77 (32.2 bits), Expect = 2.1e-45, Sum P(2) = 2.1e-45
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 258 NASQLEAIHEGLLRKAFVLIQGPPGTGKTQT 288
N SQ+ A+ + +L++ LIQGPPGTGKT T
Sbjct: 482 NHSQVYAV-KTVLQRPLSLIQGPPGTGKTVT 511
>UNIPROTKB|Q92900 [details] [associations]
symbol:UPF1 "Regulator of nonsense transcripts 1"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0009048 "dosage compensation by
inactivation of X chromosome" evidence=IEA] [GO:0000932
"cytoplasmic mRNA processing body" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0000184 "nuclear-transcribed
mRNA catabolic process, nonsense-mediated decay"
evidence=IDA;NAS;IMP;TAS] [GO:0006449 "regulation of translational
termination" evidence=IMP;NAS] [GO:0004386 "helicase activity"
evidence=NAS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0003723 "RNA binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=NAS] [GO:0071044 "histone mRNA catabolic
process" evidence=IMP] [GO:0035145 "exon-exon junction complex"
evidence=IDA] [GO:0044530 "supraspliceosomal complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0000785 "chromatin"
evidence=IDA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0006260 "DNA replication" evidence=IMP] [GO:0006281 "DNA
repair" evidence=IDA] [GO:0006406 "mRNA export from nucleus"
evidence=TAS] [GO:0007049 "cell cycle" evidence=IMP] [GO:0005829
"cytosol" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016070 "RNA metabolic process" evidence=TAS] [GO:0016071 "mRNA
metabolic process" evidence=TAS] Reactome:REACT_71
Reactome:REACT_21257 InterPro:IPR018999 Pfam:PF09416 GO:GO:0005829
GO:GO:0005524 GO:GO:0010467 GO:GO:0000184 GO:GO:0046872
GO:GO:0003677 GO:GO:0006260 GO:GO:0008270 GO:GO:0006281
GO:GO:0000785 GO:GO:0003682 GO:GO:0003723 GO:GO:0007049
GO:GO:0006406 GO:GO:0000932 eggNOG:COG1112 GO:GO:0071044
GO:GO:0009048 GO:GO:0004004 GO:GO:0035145 EMBL:AC003972
GO:GO:0044530 GO:GO:0006449 HOGENOM:HOG000205990 KO:K14326
OMA:MFYEGSL CTD:5976 EMBL:U65533 EMBL:U59323 EMBL:D86988
EMBL:AF074016 EMBL:BC039817 IPI:IPI00034049 IPI:IPI00399170
RefSeq:NP_002902.2 UniGene:Hs.515266 PDB:2GJK PDB:2GK6 PDB:2GK7
PDB:2IYK PDB:2WJV PDB:2WJY PDB:2XZO PDB:2XZP PDBsum:2GJK
PDBsum:2GK6 PDBsum:2GK7 PDBsum:2IYK PDBsum:2WJV PDBsum:2WJY
PDBsum:2XZO PDBsum:2XZP ProteinModelPortal:Q92900 SMR:Q92900
DIP:DIP-29875N IntAct:Q92900 MINT:MINT-5005507 STRING:Q92900
PhosphoSite:Q92900 DMDM:17380291 PaxDb:Q92900 PRIDE:Q92900
Ensembl:ENST00000262803 GeneID:5976 KEGG:hsa:5976 UCSC:uc002nkf.3
UCSC:uc002nkg.3 GeneCards:GC19P018942 HGNC:HGNC:9962 HPA:HPA019587
HPA:HPA020857 MIM:601430 neXtProt:NX_Q92900 PharmGKB:PA34328
HOVERGEN:HBG061556 InParanoid:Q92900 ChiTaRS:UPF1
EvolutionaryTrace:Q92900 GenomeRNAi:5976 NextBio:23259
ArrayExpress:Q92900 Bgee:Q92900 CleanEx:HS_UPF1
Genevestigator:Q92900 GermOnline:ENSG00000005007 Uniprot:Q92900
Length = 1129
Score = 479 (173.7 bits), Expect = 2.2e-45, Sum P(2) = 2.2e-45
Identities = 125/390 (32%), Positives = 217/390 (55%)
Query: 379 CAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIG---LKAHHSVNSV-AIDHL--VEQ 432
CAPSN A+D++ ++ TG++ + + + + + L H+ + ++ ++ L ++Q
Sbjct: 531 CAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQ 590
Query: 433 KRDD----SAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVI 488
+D+ S+AD++++ A ++ + R ++N VI C+ + +G L+K+ F ++
Sbjct: 591 LKDETGELSSADEKRYRALKRTAE--RELLMNADVICCTCVG-AGDPRLAKMQ--FRSIL 645
Query: 489 IDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGY- 547
IDE+ QA EP +VP+ G KQ+ LVGD QL V+ A G SLF+RL G
Sbjct: 646 IDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIR 705
Query: 548 PVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFS--FFDIHE 605
P++ L+ QYRMHP + +FPS FY+ +L++G D + + +++ P FF + +
Sbjct: 706 PIR-LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGF-DFQWPQPDKPMFFYVTQ 763
Query: 606 GKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQ---VKQFQER 662
G+E + S++N E V + KL+ + Q+ II+PY Q + Q+ +
Sbjct: 764 GQEEIASSGTSYLNRTEAANVEKITTKLLKAGAK---PDQIGIITPYEGQRSYLVQYMQ- 819
Query: 663 FKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKS 722
F + + + V+I +VD QGREKD I SCVRA++ + IGFL D RR+NV +TRA+
Sbjct: 820 FSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARY 879
Query: 723 SILVVGCASTLREDKHWNNLVKSAEKQDCL 752
+++VG L + WN+L+ ++Q L
Sbjct: 880 GVIIVGNPKALSKQPLWNHLLNYYKEQKVL 909
Score = 77 (32.2 bits), Expect = 2.2e-45, Sum P(2) = 2.2e-45
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 258 NASQLEAIHEGLLRKAFVLIQGPPGTGKTQT 288
N SQ+ A+ + +L++ LIQGPPGTGKT T
Sbjct: 483 NHSQVYAV-KTVLQRPLSLIQGPPGTGKTVT 512
>UNIPROTKB|E2RL81 [details] [associations]
symbol:UPF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] InterPro:IPR018999 Pfam:PF09416 GO:GO:0005524
GO:GO:0005737 GO:GO:0000184 GO:GO:0003677 GO:GO:0008270
GO:GO:0004386 GeneTree:ENSGT00550000074391 OMA:MFYEGSL
EMBL:AAEX03012279 Ensembl:ENSCAFT00000023180 Uniprot:E2RL81
Length = 1130
Score = 479 (173.7 bits), Expect = 2.2e-45, Sum P(2) = 2.2e-45
Identities = 125/390 (32%), Positives = 217/390 (55%)
Query: 379 CAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIG---LKAHHSVNSV-AIDHL--VEQ 432
CAPSN A+D++ ++ TG++ + + + + + L H+ + ++ ++ L ++Q
Sbjct: 532 CAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQ 591
Query: 433 KRDD----SAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVI 488
+D+ S+AD++++ A ++ + R ++N VI C+ + +G L+K+ F ++
Sbjct: 592 LKDETGELSSADEKRYRALKRTAE--RELLMNADVICCTCVG-AGDPRLAKMQ--FRSIL 646
Query: 489 IDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGY- 547
IDE+ QA EP +VP+ G KQ+ LVGD QL V+ A G SLF+RL G
Sbjct: 647 IDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIR 706
Query: 548 PVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFS--FFDIHE 605
P++ L+ QYRMHP + +FPS FY+ +L++G D + + +++ P FF + +
Sbjct: 707 PIR-LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGF-DFQWPQPDKPMFFYVTQ 764
Query: 606 GKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQ---VKQFQER 662
G+E + S++N E V + KL+ + Q+ II+PY Q + Q+ +
Sbjct: 765 GQEEIASSGTSYLNRTEAANVEKITTKLLKAGAK---PDQIGIITPYEGQRSYLVQYMQ- 820
Query: 663 FKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKS 722
F + + + V+I +VD QGREKD I SCVRA++ + IGFL D RR+NV +TRA+
Sbjct: 821 FSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARY 880
Query: 723 SILVVGCASTLREDKHWNNLVKSAEKQDCL 752
+++VG L + WN+L+ ++Q L
Sbjct: 881 GVIIVGNPKALSKQPLWNHLLNYYKEQKVL 910
Score = 77 (32.2 bits), Expect = 2.2e-45, Sum P(2) = 2.2e-45
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 258 NASQLEAIHEGLLRKAFVLIQGPPGTGKTQT 288
N SQ+ A+ + +L++ LIQGPPGTGKT T
Sbjct: 484 NHSQVYAV-KTVLQRPLSLIQGPPGTGKTVT 513
>ZFIN|ZDB-GENE-040426-2836 [details] [associations]
symbol:upf1 "upf1 regulator of nonsense
transcripts homolog (yeast)" species:7955 "Danio rerio" [GO:0003677
"DNA binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA
catabolic process, nonsense-mediated decay" evidence=IEA;IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0009790 "embryo
development" evidence=IMP] InterPro:IPR018999 Pfam:PF09416
ZFIN:ZDB-GENE-040426-2836 GO:GO:0005524 GO:GO:0005737 GO:GO:0000184
GO:GO:0003677 GO:GO:0008270 GO:GO:0009790 GO:GO:0004386
HOGENOM:HOG000205990 KO:K14326 CTD:5976 HOVERGEN:HBG061556
EMBL:BC045353 EMBL:FM986817 IPI:IPI00491565 RefSeq:NP_998639.1
UniGene:Dr.96025 SMR:Q7ZVZ4 STRING:Q7ZVZ4 GeneID:406783
KEGG:dre:406783 NextBio:20818296 Uniprot:Q7ZVZ4
Length = 1100
Score = 472 (171.2 bits), Expect = 1.2e-44, Sum P(2) = 1.2e-44
Identities = 123/390 (31%), Positives = 217/390 (55%)
Query: 379 CAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIG---LKAHHSVNSV-AIDHL--VEQ 432
CAPSN A+D++ ++ TG++ + + + + + L H+ + ++ ++ L ++Q
Sbjct: 500 CAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQ 559
Query: 433 KRDD----SAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVI 488
+D+ S++D++++ A ++ + R ++N VI C+ + +G L+K+ F ++
Sbjct: 560 LKDETGELSSSDEKRYRALKRTAE--RELLMNADVICCTCVG-AGDPRLAKMQ--FRSIL 614
Query: 489 IDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGY- 547
IDE+ QA EP +VP+ G KQ+ LVGD QL V+ A G SLF+RL G
Sbjct: 615 IDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIR 674
Query: 548 PVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFS--FFDIHE 605
P++ L+ QYRMHP + +FPS FY+ +L++G D + + +++ P FF + +
Sbjct: 675 PIR-LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRLKKGF-DFQWPQPDKPMFFYVTQ 732
Query: 606 GKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQ---VKQFQER 662
G+E + S++N E V + +L+ + Q+ II+PY Q + Q+ +
Sbjct: 733 GQEEIASSGTSYLNRTEAANVEKITTRLLKAGAK---PDQIGIITPYEGQRSYLVQYMQ- 788
Query: 663 FKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKS 722
F + + + V+I +VD QGREKD I SCVRA++ + IGFL D RR+NV +TRA+
Sbjct: 789 FSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARY 848
Query: 723 SILVVGCASTLREDKHWNNLVKSAEKQDCL 752
+++VG L + WN+L+ ++Q L
Sbjct: 849 GVIIVGNPKALSKQPLWNHLLNYYKEQKVL 878
Score = 77 (32.2 bits), Expect = 1.2e-44, Sum P(2) = 1.2e-44
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 258 NASQLEAIHEGLLRKAFVLIQGPPGTGKTQT 288
N SQ+ A+ + +L++ LIQGPPGTGKT T
Sbjct: 452 NHSQVYAV-KTVLQRPLSLIQGPPGTGKTVT 481
>WB|WBGene00004880 [details] [associations]
symbol:smg-2 species:6239 "Caenorhabditis elegans"
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA;IGI] [GO:0005737 "cytoplasm"
evidence=IEA;IDA;TAS] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016246 "RNA interference" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0030538
"embryonic genitalia morphogenesis" evidence=IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0051721 "protein phosphatase 2A
binding" evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR018999 Pfam:PF09416 SMART:SM00382
EMBL:AF074017 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0016246 GO:GO:0000184 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003723 GO:GO:0040035 eggNOG:COG1112
GO:GO:0004004 GO:GO:0030538 HOGENOM:HOG000205990 KO:K14326
EMBL:FO081800 PIR:T43280 RefSeq:NP_490829.1
ProteinModelPortal:O76512 SMR:O76512 MINT:MINT-255670 STRING:O76512
PaxDb:O76512 GeneID:171696 KEGG:cel:CELE_Y48G8AL.6 UCSC:Y48G8AL.6
CTD:171696 WormBase:Y48G8AL.6 InParanoid:O76512 NextBio:872341
Uniprot:O76512
Length = 1069
Score = 460 (167.0 bits), Expect = 2.9e-44, Sum P(2) = 2.9e-44
Identities = 132/387 (34%), Positives = 194/387 (50%)
Query: 379 CAPSNSALDEIVLRLLNTGIRDENI----RSYTPKIVRIGLKAHHSVNSVAIDHLVE--Q 432
C+PSN A+D + ++ TG++ + R ++ V L H + + L + Q
Sbjct: 495 CSPSNIAVDHLAEKIHKTGLKVVRLCARSREHSETTVPY-LTLQHQLKVMGGAELQKLIQ 553
Query: 433 KRDDSAADKQKHGATRKDRDSIRS-AILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDE 491
+D++ + K ++ +L A ++C T S + A LSK+ V+IDE
Sbjct: 554 LKDEAGELEFKDDLRYMQLKRVKEHELLAAADVICCTCSSAADARLSKIRTR--TVLIDE 611
Query: 492 AAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKM 551
+ QA EP LV + G +Q+ LVGD QL VI A G SLF+RL G
Sbjct: 612 STQATEPEILVSIMRGVRQLVLVGDHCQLGPVVICKKAAIAGLSQSLFERLVLLGIRPFR 671
Query: 552 LKTQYRMHPEVRSFPSREFYDEALEDGSDVED--YTTRDWHEYRCFGPFSFFDIHEGKES 609
L+ QYRMHP + FPS FYD +L++G D T DWH + P +FF G E
Sbjct: 672 LQVQYRMHPVLSEFPSNVFYDGSLQNGVTENDRHMTGVDWHWPKPNKP-AFFWHCSGSEE 730
Query: 610 QPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGV 669
A S++N E V L KLI Q Q+ +I+ Y Q + F + T G
Sbjct: 731 LSASGTSFLNRTEAANVEKLVSKLIKAGVQ---PHQIGVITSYEGQ-RSFIVNYMHTQGT 786
Query: 670 ESQKV---VDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILV 726
+ K+ V+I +VD QGREKD I +CVR++D IGFL+D RR+NV ITRAK +++
Sbjct: 787 LNSKLYENVEIASVDAFQGREKDYIIVTCVRSNDILGIGFLSDPRRLNVAITRAKYGLVL 846
Query: 727 VGCASTLREDKHWNNLVKSAEKQDCLF 753
VG A L W+ L+ + ++ L+
Sbjct: 847 VGNAKVLARHDLWHELINHYKSKEMLY 873
Score = 86 (35.3 bits), Expect = 2.9e-44, Sum P(2) = 2.9e-44
Identities = 33/119 (27%), Positives = 61/119 (51%)
Query: 192 SAVEKRL-FSLKIC-SLSTIAREYLALRSVGSLPFKDLILSASEKSSG--SQDQSWK--I 245
S +E R+ F++ + + +T R+Y AL ++ + K + +K G +++ K +
Sbjct: 376 SVMESRIMFTVDVVWNATTFERQYKALAALLN-DSKAISPYLYQKLLGHPAEEMMLKFDL 434
Query: 246 PGLLHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARV 304
P L N+SQ++A+ + +L + LIQGPPGTGKT ++ ++ T V
Sbjct: 435 PRRLSVAGLPELNSSQMQAVKQ-VLTRPLSLIQGPPGTGKTVVSATIVYHLVQKTEGNV 492
Score = 38 (18.4 bits), Expect = 3.2e-39, Sum P(2) = 3.2e-39
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 194 VEKRLFSLKICSLSTIAREYLA 215
V+K ++ +CS S IA ++LA
Sbjct: 485 VQKTEGNVLVCSPSNIAVDHLA 506
>FB|FBgn0030354 [details] [associations]
symbol:Upf1 "Upf1" species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=ISS] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=ISS;IMP;NAS] [GO:0005737 "cytoplasm"
evidence=IEA;NAS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016246 "RNA interference" evidence=IMP]
[GO:0035195 "gene silencing by miRNA" evidence=IMP] [GO:0071456
"cellular response to hypoxia" evidence=IMP] [GO:0035145 "exon-exon
junction complex" evidence=IDA] InterPro:IPR018999 Pfam:PF09416
GO:GO:0005524 GO:GO:0005737 GO:GO:0000184 GO:GO:0046872
GO:GO:0003677 EMBL:AE014298 GO:GO:0008270 GO:GO:0071456
GO:GO:0004386 eggNOG:COG1112 GeneTree:ENSGT00550000074391 KO:K14326
OMA:MFYEGSL EMBL:AY061379 RefSeq:NP_572767.1 UniGene:Dm.3617
ProteinModelPortal:Q9VYS3 SMR:Q9VYS3 STRING:Q9VYS3 PaxDb:Q9VYS3
PRIDE:Q9VYS3 EnsemblMetazoa:FBtr0073596 GeneID:32153
KEGG:dme:Dmel_CG1559 UCSC:CG1559-RA CTD:5976 FlyBase:FBgn0030354
InParanoid:Q9VYS3 OrthoDB:EOG476HF1 PhylomeDB:Q9VYS3
GenomeRNAi:32153 NextBio:777131 Bgee:Q9VYS3 GermOnline:CG1559
Uniprot:Q9VYS3
Length = 1180
Score = 469 (170.2 bits), Expect = 3.8e-44, Sum P(2) = 3.8e-44
Identities = 123/379 (32%), Positives = 211/379 (55%)
Query: 379 CAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIG---LKAHHSVNSVAIDH---LVEQ 432
CAPSN+A+D++ ++ T ++ + + + + + L H+ + ++ + ++Q
Sbjct: 501 CAPSNTAVDQLTEKIHRTNLKVVRVCAKSREAIDSPVSFLALHNQIRNMETNSELKKLQQ 560
Query: 433 KRDD----SAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVI 488
+D+ S+AD++++ R + + + +L A ++C T +G LS++ F ++
Sbjct: 561 LKDETGELSSADEKRY---RNLKRAAENQLLEAADVICCTCVGAGDGRLSRVK--FTSIL 615
Query: 489 IDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYP 548
IDE+ Q+ EP +VP+ G KQ+ LVGD QL V+ A G SLF+RL G
Sbjct: 616 IDESMQSTEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIR 675
Query: 549 VKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR-DWHEYRCFGPFSFFDIHEGK 607
L+ QYRMHPE+ FPS FY+ +L++G ED + D+ + P FF + +G+
Sbjct: 676 PFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCAEDRRLKLDFPWPQPERPM-FFLVTQGQ 734
Query: 608 ESQPAGSG-SWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKET 666
E + AGSG S++N E V + + + +K Q+ II+PY Q + +
Sbjct: 735 E-EIAGSGTSFLNRTEAANVEKITTRFLKA--GIKPE-QIGIITPYEGQRAYLVQYMQYQ 790
Query: 667 FGVESQ--KVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSI 724
+ S+ + ++I +VD QGREKD+ I SCVR+++++ IGFL D RR+NV +TRAK I
Sbjct: 791 GSLHSRLYQEIEIASVDAFQGREKDIIIMSCVRSNERQGIGFLNDPRRLNVALTRAKFGI 850
Query: 725 LVVGCASTLREDKHWNNLV 743
++VG L + + WN+L+
Sbjct: 851 IIVGNPKVLAKQQLWNHLL 869
Score = 77 (32.2 bits), Expect = 3.8e-44, Sum P(2) = 3.8e-44
Identities = 18/31 (58%), Positives = 20/31 (64%)
Query: 258 NASQLEAIHEGLLRKAFVLIQGPPGTGKTQT 288
N SQ+ A+ L R LIQGPPGTGKT T
Sbjct: 453 NRSQVYAVKHALQRP-LSLIQGPPGTGKTVT 482
>SGD|S000004685 [details] [associations]
symbol:NAM7 "ATP-dependent RNA helicase of the SFI
superfamily" species:4932 "Saccharomyces cerevisiae" [GO:0005737
"cytoplasm" evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000956 "nuclear-transcribed mRNA catabolic process"
evidence=IMP] [GO:0070478 "nuclear-transcribed mRNA catabolic
process, 3'-5' exonucleolytic nonsense-mediated decay"
evidence=IGI;IMP] [GO:0008298 "intracellular mRNA localization"
evidence=IMP] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=TAS] [GO:0016567 "protein ubiquitination"
evidence=IMP;IDA;IPI] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005844 "polysome" evidence=TAS] [GO:0003676 "nucleic acid
binding" evidence=TAS] [GO:0000184 "nuclear-transcribed mRNA
catabolic process, nonsense-mediated decay" evidence=IEA;TAS]
[GO:0006449 "regulation of translational termination" evidence=TAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030466 "chromatin
silencing at silent mating-type cassette" evidence=IGI] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006452 "translational frameshifting" evidence=IMP] [GO:0008186
"RNA-dependent ATPase activity" evidence=TAS] InterPro:IPR003593
InterPro:IPR018999 Pfam:PF09416 SMART:SM00382 SGD:S000004685
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003676 GO:GO:0016567
GO:GO:0030466 EMBL:BK006946 EMBL:Z49259 GO:GO:0005844 GO:GO:0008298
eggNOG:COG1112 InterPro:IPR014001 SMART:SM00487 GO:GO:0004004
GO:GO:0070478 GO:GO:0006449 GeneTree:ENSGT00550000074391
EMBL:X62394 EMBL:M76659 PIR:S23408 RefSeq:NP_013797.1 PDB:2XZL
PDBsum:2XZL ProteinModelPortal:P30771 SMR:P30771 DIP:DIP-2373N
IntAct:P30771 MINT:MINT-492322 STRING:P30771 PaxDb:P30771
PeptideAtlas:P30771 EnsemblFungi:YMR080C GeneID:855104
KEGG:sce:YMR080C CYGD:YMR080c HOGENOM:HOG000205990 KO:K14326
OMA:MFYEGSL OrthoDB:EOG405W86 EvolutionaryTrace:P30771
NextBio:978431 Genevestigator:P30771 GermOnline:YMR080C
Uniprot:P30771
Length = 971
Score = 449 (163.1 bits), Expect = 1.1e-42, Sum P(2) = 1.1e-42
Identities = 127/386 (32%), Positives = 201/386 (52%)
Query: 379 CAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIG---LKAHHSVNSVAIDHLVEQ-KR 434
CAPSN A+D + +L + G++ + + + + V L H+ V A L K
Sbjct: 458 CAPSNVAVDHLAAKLRDLGLKVVRLTAKSREDVESSVSNLALHNLVGRGAKGELKNLLKL 517
Query: 435 DDSAADKQKHGATR--KDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEA 492
D + R K + ILN+A +VC T +G +L+ F V+IDE+
Sbjct: 518 KDEVGELSASDTKRFVKLVRKTEAEILNKADVVCCTCVGAGD---KRLDTKFRTVLIDES 574
Query: 493 AQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGY-PVKM 551
QA EP L+P+ G KQV LVGD QL ++ A G SLF+RL G+ P++
Sbjct: 575 TQASEPECLIPIVKGAKQVILVGDHQQLGPVILERKAADAGLKQSLFERLISLGHVPIR- 633
Query: 552 LKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTT-RDWHEYRCFG-PFSFFDIHEGKES 609
L+ QYRM+P + FPS FY+ +L++G +E T + G P F+ + G+E
Sbjct: 634 LEVQYRMNPYLSEFPSNMFYEGSLQNGVTIEQRTVPNSKFPWPIRGIPMMFW-ANYGREE 692
Query: 610 QPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGV 669
A S++N E + KL +K Q+ +I+PY Q + + ++ + G
Sbjct: 693 ISANGTSFLNRIEAMNCERIITKLFR--DGVKPE-QIGVITPYEGQ-RAYILQYMQMNGS 748
Query: 670 ESQKV---VDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILV 726
+ + V++ +VD QGREKD I SCVRA+++++IGFL D RR+NVG+TRAK +++
Sbjct: 749 LDKDLYIKVEVASVDAFQGREKDYIILSCVRANEQQAIGFLRDPRRLNVGLTRAKYGLVI 808
Query: 727 VGCASTLREDKHWNNLVKSAEKQDCL 752
+G +L + WN+L+ ++ CL
Sbjct: 809 LGNPRSLARNTLWNHLLIHFREKGCL 834
Score = 81 (33.6 bits), Expect = 1.1e-42, Sum P(2) = 1.1e-42
Identities = 23/52 (44%), Positives = 31/52 (59%)
Query: 240 DQSWKIPGLLHEYIKENH---NASQLEAIHEGLLRKAFVLIQGPPGTGKTQT 288
D S+ +P L E+ N N+SQ A+ +L++ LIQGPPGTGKT T
Sbjct: 390 DISFDVP-LPKEFSIPNFAQLNSSQSNAVSH-VLQRPLSLIQGPPGTGKTVT 439
>TAIR|locus:2018536 [details] [associations]
symbol:AT1G65780 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002684 GO:GO:0004386
KO:K10706 InterPro:IPR026852 PANTHER:PTHR10887:SF27 IPI:IPI00534309
RefSeq:NP_176754.1 UniGene:At.52386 ProteinModelPortal:F4IBK4
SMR:F4IBK4 PRIDE:F4IBK4 EnsemblPlants:AT1G65780.1 GeneID:842889
KEGG:ath:AT1G65780 Uniprot:F4IBK4
Length = 1065
Score = 441 (160.3 bits), Expect = 1.6e-42, Sum P(2) = 1.6e-42
Identities = 115/330 (34%), Positives = 176/330 (53%)
Query: 450 DRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHG--FDVVIIDEAAQAVEPATLVPLAT- 506
DR I+ L A ++ ST S S ++L G +++IDEAAQ E + +P+
Sbjct: 533 DRHLIKELCLGHACLLFSTASCS-----ARLYTGTPIQLLVIDEAAQLKECESSIPMQLP 587
Query: 507 GCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFP 566
G + + LVGD QLPA V S +A G+G SLF+RL G+ ML QYRMH + SFP
Sbjct: 588 GLRHLILVGDERQLPAMVESQIALEAGFGRSLFERLALLGHKKYMLNIQYRMHCSISSFP 647
Query: 567 SREFYDEALEDGSDVEDYT-TRDWHEYRCFGPFSFFDIHEGKESQPAGSG-SWINIDEVD 624
++E Y + + D V T+ + +GP+SF +I G+E G G S N EV
Sbjct: 648 NKELYGKKILDAPTVRQRNYTKQYLPGEMYGPYSFINIAYGREEYGEGEGRSLKNNVEVV 707
Query: 625 FVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVD--ITTVDG 682
V + L+ + + K+ + +ISPY+ QV QE+ +ET ++ + I TVDG
Sbjct: 708 VVAAIIANLLQVSEKTKTRINVGVISPYKAQVIAIQEKIQETSIGDAGGLFSLRIRTVDG 767
Query: 683 CQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKH-WNN 741
QG E+D+ I S VR++ +GFL + RR NV +TRA+ + ++G +TL K W N
Sbjct: 768 FQGGEEDIIIVSTVRSNGVGRVGFLGNRRRTNVLLTRARFCLWILGNEATLMNSKSVWRN 827
Query: 742 LVKSAEKQDCLFRVSKP--YASFFSDENLE 769
L++ A+++ C + A + N+E
Sbjct: 828 LIQDAKERGCFHSAGEDESLAQAIASTNIE 857
Score = 90 (36.7 bits), Expect = 1.6e-42, Sum P(2) = 1.6e-42
Identities = 66/278 (23%), Positives = 116/278 (41%)
Query: 44 VDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKAQIIQKKDEE-EVQEWKLRLVMECGE 102
VD K + ++ ++ DY TF P L EE A ++ + + ++ +M+ E
Sbjct: 26 VDLYKGQVEKIPMEFESTGDYFKTFIPPLIEETHAALLSSMRKLWQAPVVEISYIMQTAE 85
Query: 103 A----DGFHLPSVTYEADEVES-ISPNDLLLLSKEEFKEGSTFPTTYAFALVEHCQANLL 157
D F+ ++ ++E + + P DL+ L+ + P H +
Sbjct: 86 YKLPNDLFYKVRLSGISNEASTKLMPRDLISLTDQR-------PN--------HVDGFNI 130
Query: 158 RLRMYLAGEVIHINKDAVKSQRLLNIHSLITSS----VSAVEKRLFSLKICSLSTIAREY 213
Y+ V ++ D +L L + ++RLF + + +L+T R +
Sbjct: 131 SSEPYIVALVCKVDPDRPNDVTILASKPLFVEDGRRKKNEKKERLFGIHLVNLTTNIRIW 190
Query: 214 LALR--SVG-SLPFKDLILSASEKSSGSQDQSWK--IPGLL-HEYIKENHNASQLEAIHE 267
AL G +L +L + + G Q + GL ++K N SQ +AI
Sbjct: 191 NALHPGDEGVNLNLISRVLRRNSEDEGFCIQCLQEGSDGLAPRRFLKLN--PSQEDAILN 248
Query: 268 GL-LRKAFV-----LIQGPPGTGKTQTILGLLSAILHA 299
L +R+ + LI GPPGTGKT+T LL +L+A
Sbjct: 249 CLDVRRCYHANTVRLIWGPPGTGKTKTTSVLLFTLLNA 286
Score = 39 (18.8 bits), Expect = 3.7e-37, Sum P(2) = 3.7e-37
Identities = 12/48 (25%), Positives = 24/48 (50%)
Query: 25 DYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLL 72
D F V+ S N+ ++K + R + L + + + VD + + EP +
Sbjct: 91 DLFYKVRLSGISNEASTKLMPRDLISLTDQRPNH--VDGFNISSEPYI 136
>POMBASE|SPAC16C9.06c [details] [associations]
symbol:upf1 "ATP-dependent RNA helicase Upf1"
species:4896 "Schizosaccharomyces pombe" [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=ISO] [GO:0002184 "cytoplasmic translational
termination" evidence=NAS] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IC] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006415
"translational termination" evidence=ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR018999
Pfam:PF09416 SMART:SM00382 PomBase:SPAC16C9.06c GO:GO:0005829
GO:GO:0005524 EMBL:CU329670 GO:GO:0000184 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 GO:GO:0004004 GO:GO:0002184 HOGENOM:HOG000205990
KO:K14326 OMA:MFYEGSL OrthoDB:EOG405W86 PIR:S62476
RefSeq:NP_593080.1 ProteinModelPortal:Q09820 SMR:Q09820
STRING:Q09820 PRIDE:Q09820 EnsemblFungi:SPAC16C9.06c.1
GeneID:2542327 KEGG:spo:SPAC16C9.06c NextBio:20803388
Uniprot:Q09820
Length = 925
Score = 428 (155.7 bits), Expect = 7.4e-42, Sum P(3) = 7.4e-42
Identities = 118/389 (30%), Positives = 194/389 (49%)
Query: 379 CAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIG---LKAHHSVNSVA----IDHLVE 431
CAPSN A+D++ ++ TG+R + + + + + L H + + + L++
Sbjct: 448 CAPSNVAVDQLAEKIHRTGLRVVRVAAKSREDIESSVSFLSLHEQIKNYKFNPELQRLLK 507
Query: 432 QKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDE 491
+ +++ Q R + +L A ++C T +G +SK + F V+IDE
Sbjct: 508 LRSENNELSIQDEKKLRILVAAAEKELLRAAHVICCTCVGAGDRRISK--YKFRSVLIDE 565
Query: 492 AAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKM 551
A QA EP ++PL G KQV LVGD QL V++ SLF+RL G
Sbjct: 566 ATQASEPECMIPLVLGAKQVVLVGDHQQLGPVVMNKKVALASLSQSLFERLIILGNSPFR 625
Query: 552 LKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR--DWHEYRCFGPFSFFDIHEGKES 609
L QYRMHP + FPS FY+ L++G + R D+ + P F+ + G+E
Sbjct: 626 LVVQYRMHPCLSEFPSNTFYEGTLQNGVTTSERIARHVDFPWIQPDSPLMFY-ANFGQEE 684
Query: 610 QPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSS---SQLAIISPY---RHQVKQFQERF 663
A S++N E K+++ + L+S+ Q+ I++PY R + Q+ +
Sbjct: 685 LSASGTSFLNRTEASTC----EKIVTTF--LRSNVLPEQIGIVTPYDGQRSYIVQYMQN- 737
Query: 664 KETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSS 723
+ + K V++ +VD QGREKD I SCVR+S+ + IGF+ D RR+NV +TRAK
Sbjct: 738 NGSMQKDLYKAVEVASVDAFQGREKDFIILSCVRSSEHQGIGFVNDPRRLNVALTRAKYG 797
Query: 724 ILVVGCASTLREDKHWNNLVKSAEKQDCL 752
++V+G L + W + V +++ L
Sbjct: 798 VIVLGNPKVLAKHALWYHFVLHCKEKGYL 826
Score = 90 (36.7 bits), Expect = 7.4e-42, Sum P(3) = 7.4e-42
Identities = 23/51 (45%), Positives = 30/51 (58%)
Query: 258 NASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLS--AILHATPARVHS 306
NASQ EA+ +L K LIQGPPGTGKT T ++ A + + + HS
Sbjct: 394 NASQSEAVR-AVLSKPLSLIQGPPGTGKTVTSASVVYHLATMQSRKRKSHS 443
Score = 47 (21.6 bits), Expect = 7.4e-42, Sum P(3) = 7.4e-42
Identities = 17/60 (28%), Positives = 26/60 (43%)
Query: 36 RNDKNSKKVDRGKL----GLREVKDTYKDVDDYLATFEPLLFEEVKAQIIQKKDEEEVQE 91
R D N+ D K L V+ YKD Y A PL+ + +A ++ E + Q+
Sbjct: 191 RKDPNANLEDLDKPIEDDSLPSVELRYKDAHAYQAVLSPLI--QAEADYDKRLKESQTQK 248
Score = 41 (19.5 bits), Expect = 3.4e-36, Sum P(2) = 3.4e-36
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 382 SNSALDEIVLRLLNTGIRDENIRSYTP 408
S+S+L + VL N G R+ + + P
Sbjct: 93 SHSSLSDTVLECYNCGTRNVFLLGFIP 119
>TAIR|locus:2166183 [details] [associations]
symbol:AT5G37160 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0016787
"hydrolase activity" evidence=IEA] EMBL:CP002688 GO:GO:0004519
KO:K10706 IPI:IPI00521499 RefSeq:NP_198532.1 UniGene:At.55177
ProteinModelPortal:F4K5W6 SMR:F4K5W6 PRIDE:F4K5W6
EnsemblPlants:AT5G37160.1 GeneID:833689 KEGG:ath:AT5G37160
OMA:WAELISE Uniprot:F4K5W6
Length = 871
Score = 417 (151.9 bits), Expect = 1.0e-41, Sum P(3) = 1.0e-41
Identities = 108/344 (31%), Positives = 174/344 (50%)
Query: 450 DRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLAT-GC 508
+ + IR L A I+ T S + +++ D++++DE AQ E ++ L G
Sbjct: 527 NNEDIRKFCLQNADIIFCTASSVANINPARIG-SVDLLVVDETAQLKECESVAALQLPGL 585
Query: 509 KQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSR 568
L+GD QLPA V + + +G SLF+RL G+ +L QYRMHP + FP++
Sbjct: 586 CHALLIGDEYQLPAMVHNEECDKAKFGRSLFERLVLIGHSKHLLNVQYRMHPSISRFPNK 645
Query: 569 EFYDEALEDGSDVED--YTTRDWHEYRCFGPFSFFDIHEGKESQPAGSG-SWINIDEVDF 625
EFY + D ++V++ Y R + + FG FSF ++ GKE G G S N+ EV
Sbjct: 646 EFYGGRITDAANVQESIYEKR-FLQGNMFGTFSFINVGRGKEE--FGDGHSPKNMVEVAV 702
Query: 626 VLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFG---VESQKVVDITTVDG 682
+ + L + Q K + +ISPY+ QV+ QER + + V+ +++ +VDG
Sbjct: 703 ISKIISNLFKVSSQRKQKMSVGVISPYKGQVRAIQERVGDKYNSLSVDQLFTLNVQSVDG 762
Query: 683 CQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLR-EDKHWNN 741
QG E DV I S VR + ++GFL++ +R NV +TRA+ + V+G +TL W
Sbjct: 763 FQGGEVDVIIISTVRCNVNGNVGFLSNRQRANVALTRARHCLWVIGNGTTLALSGSIWAE 822
Query: 742 LVKSAEKQDCLFRVSKPYASFFSDENLESMRKNATTDNVQGADG 785
L+ + + C + D+NL +A D+V + G
Sbjct: 823 LISESRTRGCFYDA-------VDDKNLRDAMSDALLDDVSSSFG 859
Score = 96 (38.9 bits), Expect = 1.0e-41, Sum P(3) = 1.0e-41
Identities = 70/280 (25%), Positives = 120/280 (42%)
Query: 45 DRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKAQI------IQKKDEEEVQEWKLRLVM 98
D K + + D + VD+Y F P L EE + ++ + K + + +++
Sbjct: 34 DLSKEKIMTIPDRFSSVDEYSQCFVPHLLEETRTELFSSFRSLSKSPVSRILSVETKVIE 93
Query: 99 ECGEAD--GFH-LPSVTYEADEVESISPN--DLLLLSKEEFKEGSTFPTTYAFALVEHCQ 153
G + FH + + Y D+ E P D++ LS P +L E +
Sbjct: 94 YSGRSSIKWFHDIKLMDYADDKNEIYEPKCGDIIALS----------P----LSLTEE-R 138
Query: 154 ANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSAVEKRLF--SLKICSLSTIAR 211
+ L L G V + D+ +++H + S+S EK F + + +++T R
Sbjct: 139 PRIDDLDPLLLGYVFSVYGDSK-----ISVH--FSRSISQSEKHTFCTGVFLINITTNTR 191
Query: 212 EYLALR--SVGSLPFKDLI---LSASEKS-SGSQDQSWKIPGLLHEYIKENH-NASQLEA 264
+ AL + S + ++ SA+E+ S D + + I+ N+SQ EA
Sbjct: 192 IWNALHKDAADSTLIQSVLQEDASATEQCFSCENDVDGSDSDRVVDIIRSAKLNSSQ-EA 250
Query: 265 IHEGLLR------KAFV-LIQGPPGTGKTQTILGLLSAIL 297
G L+ K V LI GPPGTGKT+T+ LLS ++
Sbjct: 251 AILGFLKTRNCKHKESVKLIWGPPGTGKTKTVATLLSTLM 290
Score = 50 (22.7 bits), Expect = 1.0e-41, Sum P(3) = 1.0e-41
Identities = 9/14 (64%), Positives = 12/14 (85%)
Query: 379 CAPSNSALDEIVLR 392
CAP+NSA+ E+V R
Sbjct: 323 CAPTNSAIAEVVSR 336
Score = 41 (19.5 bits), Expect = 8.9e-41, Sum P(3) = 8.9e-41
Identities = 7/17 (41%), Positives = 12/17 (70%)
Query: 379 CAPSNSALDEIVLRLLN 395
CAP+N+ + + RLL+
Sbjct: 299 CAPTNTTIVAVASRLLS 315
>DICTYBASE|DDB_G0288923 [details] [associations]
symbol:upf1 "regulator of nonsense transcripts 1"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;ISS]
[GO:0005524 "ATP binding" evidence=IEA;IC] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA;ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=ISS] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR018999 Pfam:PF09416 dictyBase:DDB_G0288923
GO:GO:0005524 GO:GO:0005737 GO:GO:0000184 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 EMBL:AAFI02000126
GenomeReviews:CM000154_GR GO:GO:0003676 eggNOG:COG1112
GO:GO:0004004 KO:K14326 RefSeq:XP_636490.1
ProteinModelPortal:Q54I89 SMR:Q54I89 STRING:Q54I89
EnsemblProtists:DDB0233746 GeneID:8626873 KEGG:ddi:DDB_G0288923
InParanoid:Q54I89 Uniprot:Q54I89
Length = 1331
Score = 451 (163.8 bits), Expect = 1.2e-41, Sum P(3) = 1.2e-41
Identities = 121/390 (31%), Positives = 202/390 (51%)
Query: 379 CAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVA--IDHLVEQKRDD 436
C PSN A+D++ +L G++ + S + V ++ H +++ +D + + +
Sbjct: 588 CTPSNVAIDQLTGKLHEIGLKVVRLSSKLREEVASPVE-HLTLHKQVYKLDQMGDGELGK 646
Query: 437 SAADKQKHGA-TRKD-------RDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVI 488
K+ G+ + +D R + AIL +A ++C+T +G LS+ F ++
Sbjct: 647 LRKLKEAFGSLSNEDEKRYIYLRRMMEMAILRKADVICATCVGAGDPRLSQFR--FPHIL 704
Query: 489 IDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYP 548
IDE+ QA EP L+PL G KQV LVGD QL ++ G SLF+RL G+
Sbjct: 705 IDESTQASEPECLIPLMMGAKQVILVGDHRQLGPVLLCKKVVDAGLSQSLFERLISLGHH 764
Query: 549 VKMLKTQYRMHPEVRSFPSREFYDEALEDG---SDVEDYTTRDWHEYRCFGPFSFFDIHE 605
+ L QYRMHP + FPS Y+ L +D + + W + + P FF+
Sbjct: 765 PERLTIQYRMHPSLTEFPSNTSYEGQLVSELSHTDRDSQSKFPWPQPK--DPMFFFNCTG 822
Query: 606 GKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKS-SSQLAIISPYRHQVKQFQERFK 664
+E +G+ S+IN E + K+++ + +L S Q+ II+PY Q +
Sbjct: 823 SEEISSSGT-SFINTTEAS----ICEKIVTKFLELGSLPGQIGIITPYEGQRAYITSHMQ 877
Query: 665 ET--FGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKS 722
++ +E K +++ +VD QGREKD I SCVR++D + IGFL D RR+NV +TRA+
Sbjct: 878 KSGKLNLELYKSIEVASVDSFQGREKDYIILSCVRSNDYQGIGFLQDPRRLNVALTRARF 937
Query: 723 SILVVGCASTLREDKHWNNLVKSAEKQDCL 752
++++G A L +D WN+L+ + ++ L
Sbjct: 938 GLIILGNAKVLSKDPLWNSLISHFKNKNVL 967
Score = 81 (33.6 bits), Expect = 1.2e-41, Sum P(3) = 1.2e-41
Identities = 36/129 (27%), Positives = 60/129 (46%)
Query: 165 GEVIHINKDAVKSQRLLNIHSLITSSVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPF 224
G VIHI+ + LL++ + S + K + +++ ST + L+ ++ S
Sbjct: 445 GRVIHID-----DENLLSLETKSRCSFDSGPKGSYRMEMVWRSTSSERILS--AMKSFAI 497
Query: 225 KDLILSASEKSS--GSQD-----QSWKIPGLLHEYIKENHNASQLEAIHEGLLRKAFVLI 277
K+ LS+ + G D ++P H N SQ+ A+++ +L LI
Sbjct: 498 KEQALSSYLYHALLGHPDIPPAPLDIQLPTNFHLKNLPRLNESQISAVNK-VLTAPLSLI 556
Query: 278 QGPPGTGKT 286
QGPPGTGKT
Sbjct: 557 QGPPGTGKT 565
Score = 38 (18.4 bits), Expect = 1.2e-41, Sum P(3) = 1.2e-41
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 58 YKDVDDYLATFEPLLFEEVKAQIIQKKDEEEVQE 91
YKD +Y PL+ E++A K E+E++E
Sbjct: 361 YKDAYEYREIISPLI--ELEA-----KHEKELRE 387
>TAIR|locus:2166173 [details] [associations]
symbol:AT5G37150 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0016787
"hydrolase activity" evidence=IEA] EMBL:CP002688 GO:GO:0004386
KO:K10706 IPI:IPI01020555 RefSeq:NP_198531.2 UniGene:At.55176
ProteinModelPortal:F4K5W5 SMR:F4K5W5 PRIDE:F4K5W5
EnsemblPlants:AT5G37150.1 GeneID:833688 KEGG:ath:AT5G37150
OMA:RSVDEYY Uniprot:F4K5W5
Length = 839
Score = 411 (149.7 bits), Expect = 9.9e-41, Sum P(3) = 9.9e-41
Identities = 101/313 (32%), Positives = 170/313 (54%)
Query: 450 DRDSIRSAILNEA-VIVCSTLSFSGSALLSKLNHG-FDVVIIDEAAQAVEPATLVPLAT- 506
+ + IR L A +I+C+ SG+A ++ G +++++DEAAQ E ++ L
Sbjct: 494 ENEDIRKFCLQNADIILCTA---SGAAEMNVERTGNVELLVVDEAAQLKECESVAALQLP 550
Query: 507 GCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFP 566
G + L+GD QLPA V + + E +G SLF+RL G+ +L QYRMHP + FP
Sbjct: 551 GLRHAILIGDEFQLPAMVHNEMCEKAKFGRSLFERLVLLGHNKHLLDVQYRMHPSISRFP 610
Query: 567 SREFYDEALEDGSDVED--YTTRDWHEYRCFGPFSFFDIHEGKESQPAGSG-SWINIDEV 623
++EFY ++D +V++ Y R + + FG FSF ++ GKE G G S N+ EV
Sbjct: 611 NKEFYGGRIKDAENVKESIYQKR-FLQGNMFGSFSFINVGRGKEE--FGDGHSPKNMVEV 667
Query: 624 DFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVES--QKVVDITTVD 681
V + L + + + + ++SPY+ Q++ QE+ + + S Q +++ +VD
Sbjct: 668 AVVSEIISNLFKVSCERRMKVSVGVVSPYKGQMRAIQEKIGDKYSSLSGQQFALNVRSVD 727
Query: 682 GCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLR-EDKHWN 740
G QG E+D+ I S VR++ +GFL + +R NV +TRA+ + V+G +TL W
Sbjct: 728 GFQGGEEDIIIISTVRSNSNGKVGFLNNRQRANVALTRARHCLWVIGNETTLALSGSIWA 787
Query: 741 NLVKSAEKQDCLF 753
L+ + + C +
Sbjct: 788 TLISESRTRGCFY 800
Score = 94 (38.1 bits), Expect = 9.9e-41, Sum P(3) = 9.9e-41
Identities = 64/263 (24%), Positives = 114/263 (43%)
Query: 52 REVKDTYKDVDDYLATFEPLLFEEVKAQI------IQKKDEEEVQEWKLRLVMECGEADG 105
+ V D ++ VD+Y F P L E ++ + K +++ + + G +
Sbjct: 30 KTVPDKFRSVDEYYQCFVPHLLIEAHTELFSSLKSVSKSPFVQIRSMETKTKQSSGSSSN 89
Query: 106 FHLPSVTYEADEVESISPNDLLLLSKEEFKEGSTFPTTYAFALVEHCQANLLRLRMYLAG 165
+T +A ES+S +K + K G AL + L L
Sbjct: 90 KLFYDITLKA--TESLS-------AKYQPKCGDLI------ALTMDKPRRINDLNPLLLA 134
Query: 166 EVIHINKDAVKSQRLLNIHSLITSSVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFK 225
V + D +K +++H ++ S+S +E F + + +L+T R + AL + ++
Sbjct: 135 YVFSSDGD-LK----ISVH--LSRSISPLENYSFGVFLMTLTTNTRIWNALHNEAAI--S 185
Query: 226 DLILSASEKSSGSQDQSWKIPG---LLHEYIKENH-NASQLEAIHEGLL-------RKAF 274
L S + ++ + K+ G L + I+ N+SQ +AI G L + +
Sbjct: 186 TLTKSVLQANTVNNVFVLKMMGDLTLFLDIIRSTKLNSSQEDAIL-GCLETRNCTHKNSV 244
Query: 275 VLIQGPPGTGKTQTILGLLSAIL 297
LI GPPGTGKT+T+ LL A+L
Sbjct: 245 KLIWGPPGTGKTKTVATLLFALL 267
Score = 48 (22.0 bits), Expect = 9.9e-41, Sum P(3) = 9.9e-41
Identities = 8/17 (47%), Positives = 14/17 (82%)
Query: 379 CAPSNSALDEIVLRLLN 395
CAP+N+A+ ++ RLL+
Sbjct: 276 CAPTNTAIVQVASRLLS 292
>TAIR|locus:2018561 [details] [associations]
symbol:AT1G65810 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0048451 "petal formation"
evidence=RCA] [GO:0048453 "sepal formation" evidence=RCA]
EMBL:CP002684 GO:GO:0004386 KO:K10706 InterPro:IPR026852
PANTHER:PTHR10887:SF27 IPI:IPI01019905 RefSeq:NP_176757.1
UniGene:At.52388 ProteinModelPortal:F4IBK8 SMR:F4IBK8 PRIDE:F4IBK8
EnsemblPlants:AT1G65810.1 GeneID:842892 KEGG:ath:AT1G65810
OMA:DSEINKR ArrayExpress:F4IBK8 Uniprot:F4IBK8
Length = 1050
Score = 449 (163.1 bits), Expect = 1.4e-40, Sum P(3) = 1.4e-40
Identities = 112/322 (34%), Positives = 173/322 (53%)
Query: 460 NEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLAT-GCKQVFLVGDPV 518
N ++ C+ S SA L ++ +++IDEAAQ E + +PL G + L+GD
Sbjct: 533 NAYLLFCTA---SSSARLH-MSSPIQLLVIDEAAQLKECESAIPLQLRGLQHAILIGDEK 588
Query: 519 QLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDG 578
QLPA + S +A G SLF+RL G+ ++L QYRMHP + FP+REFYD + D
Sbjct: 589 QLPAMIKSNIASEADLGRSLFERLVLLGHNKQLLNMQYRMHPSISIFPNREFYDMKILDA 648
Query: 579 SDVE--DYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISM 636
V Y + E + +GP+SF +I G+E G S N+ EV V + KL S+
Sbjct: 649 PSVRLRSYEKKFLPE-KMYGPYSFINIAYGREQFGEGYSSK-NLVEVSVVAEIVSKLYSV 706
Query: 637 YPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCV 696
+ + + +ISPY+ QV QER E + E V + +VDG QG E+D+ I S V
Sbjct: 707 SRKTGRTISVGVISPYKAQVFAIQERIGEKYNTEGTFTVSVRSVDGFQGGEEDIIIISTV 766
Query: 697 RASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKH-WNNLVKSAEKQDCLFRV 755
R++ +IGFL++ +R NV +TRA+ + ++G +TL ++ W LV A+ ++C
Sbjct: 767 RSNGNGAIGFLSNQQRTNVALTRARYCLWILGNEATLTNNRSVWRQLVDDAKARNCFHNA 826
Query: 756 SKPYASFFSDENLESMRKNATT 777
+ DE+L + +TT
Sbjct: 827 EE-------DESLAQCIERSTT 841
Score = 63 (27.2 bits), Expect = 1.4e-40, Sum P(3) = 1.4e-40
Identities = 20/42 (47%), Positives = 24/42 (57%)
Query: 258 NASQLEAIHEGLLRKA------FVLIQGPPGTGKTQTILGLL 293
N+SQ +AI L K+ LI GPPGTGKT+T LL
Sbjct: 268 NSSQEDAILRCLEAKSCNHSNNIKLIWGPPGTGKTKTTSVLL 309
Score = 42 (19.8 bits), Expect = 1.4e-40, Sum P(3) = 1.4e-40
Identities = 10/26 (38%), Positives = 17/26 (65%)
Query: 379 CAPSNSALDEIVLRLLNTGIRDENIR 404
CAP+N A+ E+ RL+ + E++R
Sbjct: 322 CAPTNIAVLEVCSRLVK--LVSESLR 345
>TAIR|locus:2152627 [details] [associations]
symbol:AT5G37030 species:3702 "Arabidopsis thaliana"
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] EMBL:CP002688 GO:GO:0004519 KO:K10706
IPI:IPI00540124 RefSeq:NP_198519.1 UniGene:At.55172
ProteinModelPortal:F4K5V7 SMR:F4K5V7 PRIDE:F4K5V7
EnsemblPlants:AT5G37030.1 GeneID:833673 KEGG:ath:AT5G37030
Uniprot:F4K5V7
Length = 638
Score = 430 (156.4 bits), Expect = 7.0e-40, Sum P(2) = 7.0e-40
Identities = 106/324 (32%), Positives = 176/324 (54%)
Query: 449 KDRDSIRSAILNEAV-----IVCSTLSFSGS--ALLSKLNH------GFDVVIIDEAAQA 495
KD D +R+ L+ + + ST + S +++ L + +V+++DEAAQ
Sbjct: 300 KDTDYLRNVFLDHRISKLRKLFLSTCGWKQSLESIIDLLENTETKTGNIEVLVVDEAAQL 359
Query: 496 VEPATLVPLAT-GCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKT 554
E ++ L G + L+GD QLPA V + E +G SLF+RL G+ +L
Sbjct: 360 KECESVAALQLPGLRHAILIGDEFQLPAMVHNDQCEKAKFGRSLFERLVLLGHKKHLLDV 419
Query: 555 QYRMHPEVRSFPSREFYDEALEDGSDVED--YTTRDWHEYRCFGPFSFFDIHEGKESQPA 612
QYRMHP + FP +EFY ++D ++V++ Y R + + FG FSF ++ GKE
Sbjct: 420 QYRMHPSISRFPYKEFYGGRIKDAANVQESIYQKR-FLQGNMFGSFSFINVGRGKEEFGD 478
Query: 613 GSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQ 672
G S N+ EV V + L + + K + +I+PY+ QV+ QER ++ + S
Sbjct: 479 GD-SPKNMVEVAVVSEIISNLFKVSRERKMKMSVGVITPYKGQVRAIQERIRDKYSSLSG 537
Query: 673 KV--VDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCA 730
++ V++ +VDG QG E+D+ I S VR++ +GFL++ +R NV +TRA+ + V+G
Sbjct: 538 ELFTVNVRSVDGFQGGEEDIIIISTVRSNSNGKVGFLSNRQRANVALTRARHCLWVIGNE 597
Query: 731 STL-REDKHWNNLVKSAEKQDCLF 753
STL R W NL+ ++++ C +
Sbjct: 598 STLARSGSIWANLISDSKRRKCFY 621
Score = 59 (25.8 bits), Expect = 7.0e-40, Sum P(2) = 7.0e-40
Identities = 11/36 (30%), Positives = 20/36 (55%)
Query: 45 DRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKAQI 80
D K ++ + D + V++YL F P L EE + ++
Sbjct: 25 DLYKQKIKTIPDKFSSVNEYLKCFVPHLLEETRTEL 60
Score = 37 (18.1 bits), Expect = 1.4e-37, Sum P(2) = 1.4e-37
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 32 ESQERNDKNSKKVDRGKLGLREV 54
E+++ N KNS K+ G L + V
Sbjct: 217 ETRDSNHKNSVKLIWGPLKTKTV 239
>TAIR|locus:2135472 [details] [associations]
symbol:AT4G05540 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002687 GO:GO:0004386
KO:K10706 IPI:IPI00530269 RefSeq:NP_567301.2 UniGene:At.54170
ProteinModelPortal:F4JGH5 SMR:F4JGH5 PRIDE:F4JGH5
EnsemblPlants:AT4G05540.1 GeneID:825906 KEGG:ath:AT4G05540
OMA:WVIGNER Uniprot:F4JGH5
Length = 689
Score = 405 (147.6 bits), Expect = 3.5e-39, Sum P(3) = 3.5e-39
Identities = 102/289 (35%), Positives = 160/289 (55%)
Query: 451 RDSIRSAILNEAVIVCSTLSFSGSALLSKLNHG-FDVVIIDEAAQAVEPATLVPLAT-GC 508
++ IR+ L A I+ T S G+A ++ G D++++DEAAQ E ++ L G
Sbjct: 399 KEDIRTFCLQNAHIIFCTAS--GAAEMTAERAGSIDMLVVDEAAQLKECESVAALQLQGL 456
Query: 509 KQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSR 568
L+GD +QLPA V S V E + SLF+RL G+ +L QYRMHP + FP+
Sbjct: 457 HHAVLIGDELQLPAMVQSEVCEKAKFVRSLFERLDSLGHKKHLLNVQYRMHPSISLFPNM 516
Query: 569 EFYDEALEDGSDVEDYT-TRDWHEYRCFGPFSFFDIHEGKESQPAGSG-SWINIDEVDFV 626
EFY + D V++ T + + + FG FSF ++ GKE G G S N+ E+ V
Sbjct: 517 EFYGGKISDAEIVKESTYQKRFLQGNMFGSFSFINVGLGKEE--FGDGHSPKNMVEIAVV 574
Query: 627 LLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKV--VDITTVDGCQ 684
+ L+ + + K+ + +ISPY+ QV QER + + S + +++ +VDG Q
Sbjct: 575 SEILTNLLKVSSETKTKMSVGVISPYKAQVSAIQERIGDKYTSVSDNLFTLNVRSVDGFQ 634
Query: 685 GREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTL 733
G E+D+ I S VR++ +IGFL++ +R NV +TRA+ + V+G TL
Sbjct: 635 GGEEDIIIISTVRSNCNGNIGFLSNRQRANVALTRARHCLWVIGNERTL 683
Score = 83 (34.3 bits), Expect = 3.5e-39, Sum P(3) = 3.5e-39
Identities = 41/126 (32%), Positives = 62/126 (49%)
Query: 182 NIHSLITSSVSAVEKRLF--SLKICSLSTIAREYLALRSV-GSLPFKDLILSASEKSSGS 238
++HS + S+S E+ F + L+T R + AL + G+L +L A+ +
Sbjct: 32 SVHS--SKSISIDEQYSFRSGFFLIYLTTNTRIWKALHNGDGNLSLIKSVLQANTADTEQ 89
Query: 239 QDQSWKIPGLLHEYIKE-NHNASQLEAIHEGL----LR-KAFV-LIQGPPGTGKTQTILG 291
S + + I+ N N+SQ AI L +R K V LI GPPGTG T+T+
Sbjct: 90 SVSSRNWGNHVLDIIRSANLNSSQESAILACLETREIRDKTSVKLIWGPPGTGNTKTVAT 149
Query: 292 LLSAIL 297
LL A+L
Sbjct: 150 LLFALL 155
Score = 42 (19.8 bits), Expect = 3.5e-39, Sum P(3) = 3.5e-39
Identities = 15/61 (24%), Positives = 25/61 (40%)
Query: 379 CAPSNSALDEIVLRLLNTGIRDENIRSYT---PKIVRIGLKAHHSVNSVAIDHLVEQKRD 435
C P+N+A+ + RLL + T IV +G + ++ D L+ D
Sbjct: 164 CTPTNTAVVAVASRLLALFKESSSTEHSTYGLGNIVLVGNRVRMGIDERGNDDLLNVFLD 223
Query: 436 D 436
D
Sbjct: 224 D 224
>TAIR|locus:2166163 [details] [associations]
symbol:AT5G37140 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0016787
"hydrolase activity" evidence=IEA] EMBL:CP002688 GO:GO:0004519
KO:K10706 IPI:IPI00534313 RefSeq:NP_198530.1 UniGene:At.55175
ProteinModelPortal:F4K5W4 SMR:F4K5W4 PRIDE:F4K5W4
EnsemblPlants:AT5G37140.1 GeneID:833686 KEGG:ath:AT5G37140
OMA:TEAKYEH ArrayExpress:F4K5W4 Uniprot:F4K5W4
Length = 692
Score = 398 (145.2 bits), Expect = 4.3e-39, Sum P(4) = 4.3e-39
Identities = 97/312 (31%), Positives = 168/312 (53%)
Query: 449 KDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHG-FDVVIIDEAAQAVEPATLVPLA-T 506
++ D+ + N +I C+ SG+A ++ + G D++++DEAAQ E ++ L +
Sbjct: 352 ENNDTKTFCLQNADIIFCTA---SGAADMNPIRTGSVDLLVVDEAAQLKECESVAALQLS 408
Query: 507 GCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFP 566
G + L+GD +QLPA V + +G SLF+RL G+ +L QYRMHP + FP
Sbjct: 409 GLRHAVLIGDELQLPAMVHNEAK----FGRSLFERLVLLGHNKHLLNVQYRMHPSISRFP 464
Query: 567 SREFYDEALEDGSDVED--YTTRDWHEYRCFGPFSFFDIHEGKESQPAGSG-SWINIDEV 623
++EFY ++D ++V++ Y R + + FG FSF ++ G+E G G S N+ EV
Sbjct: 465 NKEFYGGRIKDAANVQESIYQKR-FLQGNMFGSFSFINVGRGEEE--FGDGHSPKNMVEV 521
Query: 624 DFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFG-VESQKVVDITTVDG 682
+ + L + + + + ++SPY+ QV+ QER + + +++ +VDG
Sbjct: 522 AVISEIISNLFKVSSERRIKMSVGVVSPYKGQVRAIQERTTNKYSSLSGLFTLNVRSVDG 581
Query: 683 CQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLR-EDKHWNN 741
QG E+D+ I S VR++ +GFL + +R NV +TRA+ + V+G +TL W
Sbjct: 582 FQGGEEDIIIISTVRSNGNGKVGFLNNRQRANVALTRARHCLWVIGNETTLALSGSSWAK 641
Query: 742 LVKSAEKQDCLF 753
L+ + C +
Sbjct: 642 LISESRTLGCFY 653
Score = 71 (30.1 bits), Expect = 4.3e-39, Sum P(4) = 4.3e-39
Identities = 14/22 (63%), Positives = 17/22 (77%)
Query: 276 LIQGPPGTGKTQTILGLLSAIL 297
LI GPPGTGKT+T+ LL +L
Sbjct: 99 LIWGPPGTGKTKTVATLLFCLL 120
Score = 54 (24.1 bits), Expect = 4.3e-39, Sum P(4) = 4.3e-39
Identities = 18/59 (30%), Positives = 31/59 (52%)
Query: 379 CAPSNSALDEIVLRLLNTGIRDENIRS-Y-TPKIVRIGLKAHHSV--NSVAIDHLVEQK 433
CAP+N+A+ E+ RLL+ + S Y IV G +A + N V +D ++++
Sbjct: 129 CAPTNTAIVEVTSRLLSLFKTSSSEHSTYGLGNIVLSGNQARMGIKENDVLLDVFLDER 187
Score = 43 (20.2 bits), Expect = 4.3e-39, Sum P(4) = 4.3e-39
Identities = 12/37 (32%), Positives = 22/37 (59%)
Query: 428 HLVEQ-KRDDSAADKQKHGATRKDRDSIRSAILNEAV 463
HL+++ +R A+K+K GA +K + +I+ E V
Sbjct: 224 HLLKEVERMSEEAEKKKKGADKKPK-AIKILTFGEFV 259
>RGD|1565575 [details] [associations]
symbol:Setx "senataxin" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006302 "double-strand break repair"
evidence=IEA;ISO] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=ISO] [GO:0007623 "circadian rhythm"
evidence=ISO] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR026121 RGD:1565575 GO:GO:0006302 PANTHER:PTHR10887:SF15
IPI:IPI00560336 Ensembl:ENSRNOT00000018281 UCSC:RGD:1565575
ArrayExpress:F1M0E2 Uniprot:F1M0E2
Length = 380
Score = 269 (99.8 bits), Expect = 5.8e-38, Sum P(2) = 5.8e-38
Identities = 84/255 (32%), Positives = 123/255 (48%)
Query: 466 CSTLSFSGSALLSKLNHG-----FDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQL 520
C TLS SG LL G F VI+DEA Q+ E TL PL C ++ LVGDP QL
Sbjct: 1 CCTLSTSGGLLLESAFRGQGGVPFSCVIVDEAGQSCEVETLSPLIHRCNKLVLVGDPKQL 60
Query: 521 PATVISPVAEHLGYGTSLFKRLQRA----------G-YPVKMLKTQYRMHPEVRSFPSRE 569
P TVIS A+ GY S+ R + G PV L QYRMHP++ FPS
Sbjct: 61 PPTVISMKAQEYGYDQSMMARFCKLLEENVEQNMIGRLPVLQLTIQYRMHPDICLFPSNY 120
Query: 570 FYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLL 629
Y++ L+ E T R E+ F P+ FD+ +G E + + S+IN+ E+ V+ +
Sbjct: 121 VYNKNLKTNRLTE--TIRCSSEWP-FQPYLVFDVGDGSEQRD--NDSYINVQEIKLVMEI 175
Query: 630 FHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETF---GVESQKVVDITTVDGCQGR 686
KLI + S + II+ Y+ Q Q+ ++ F G+ ++ + +
Sbjct: 176 I-KLIKEKRKDISFRNIGIITHYKAQKTMIQKDLEKEFDKKGLLQPIMMGESRQQDSEAS 234
Query: 687 EKDVAIFSCVRASDK 701
++ C+ ASD+
Sbjct: 235 KQQQKSSECMHASDE 249
Score = 197 (74.4 bits), Expect = 5.8e-38, Sum P(2) = 5.8e-38
Identities = 39/84 (46%), Positives = 57/84 (67%)
Query: 676 DITTVDGCQGREKDVAIFSCVRASDKK-SIGFLADYRRMNVGITRAKSSILVVGCASTLR 734
++ TVD QGR+KD I +CVRAS + SIGFLA +R+NV ITRAK S+ ++G TL
Sbjct: 274 EVDTVDAFQGRQKDCIIVTCVRASAVQGSIGFLASLQRLNVTITRAKYSLFILGHLRTLM 333
Query: 735 EDKHWNNLVKSAEKQDCLFRVSKP 758
E++HW L++ A+K+ + + P
Sbjct: 334 ENQHWYELIQDAQKRGAIIKTCDP 357
Score = 38 (18.4 bits), Expect = 6.1e-12, Sum P(2) = 6.1e-12
Identities = 9/32 (28%), Positives = 18/32 (56%)
Query: 68 FEPLLFEEVKAQIIQKKDEEEVQEWKLRLVME 99
F+P L +V Q+ ++ + +++LVME
Sbjct: 143 FQPYLVFDVGDGSEQRDNDSYINVQEIKLVME 174
>TAIR|locus:2173033 [details] [associations]
symbol:AT5G52090 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0004519 eggNOG:COG1112
EMBL:AB015478 KO:K10706 IPI:IPI00525648 RefSeq:NP_200022.1
UniGene:At.65668 ProteinModelPortal:Q9FJ83 SMR:Q9FJ83 PRIDE:Q9FJ83
EnsemblPlants:AT5G52090.1 GeneID:835285 KEGG:ath:AT5G52090
TAIR:At5g52090 HOGENOM:HOG000083772 InParanoid:Q9FJ83 OMA:TACEASE
PhylomeDB:Q9FJ83 ProtClustDB:CLSN2686886 Genevestigator:Q9FJ83
Uniprot:Q9FJ83
Length = 676
Score = 397 (144.8 bits), Expect = 2.2e-37, Sum P(3) = 2.2e-37
Identities = 99/311 (31%), Positives = 168/311 (54%)
Query: 450 DRDSIRSAILNEA-VIVCSTLSFSGSALLSKLNHG-FDVVIIDEAAQAVEPATLVPLAT- 506
+ + IR L A +I+C+ SG+A ++ G +++++DEAAQ E ++ L
Sbjct: 331 ENEDIRKFCLQNADIILCTA---SGAAEMNVERTGNVELLVVDEAAQLKECESVAALQLP 387
Query: 507 GCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFP 566
G + L+GD QLPA V + + E +G SLF+RL G+ +L QYRMHP + FP
Sbjct: 388 GLRHAILIGDEFQLPAMVHNEMCEKAKFGRSLFERLVLLGHNKHLLDVQYRMHPSISRFP 447
Query: 567 SREFYDEALEDGSDVED--YTTRDWHEYRCFGPFSFFDIHEGKESQPAGSG-SWINIDEV 623
++EFY ++D +V++ Y R + + F FSF ++ GKE G G S N+ EV
Sbjct: 448 NKEFYGGRIKDAENVKESIYQKR-FLKGNMFDSFSFINVGRGKEE--FGDGHSPKNMVEV 504
Query: 624 DFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVES--QKVVDITTVD 681
+ + L + + + + ++SPY+ Q++ QE+ + + S Q +++ +VD
Sbjct: 505 AVISEIISNLYKVSCERRMKVSVGVVSPYKGQMRAIQEKIGDKYSSLSGQQFTLNVRSVD 564
Query: 682 GCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLR-EDKHWN 740
G QG E+D+ I S VR++ +GFL + +R NV +TRA+ + V+G +TL W
Sbjct: 565 GFQGGEEDIIIISTVRSNGNGKVGFLNNRQRANVALTRARHCLWVIGNETTLALSGSIWA 624
Query: 741 NLVKSAEKQDC 751
L+ + + C
Sbjct: 625 TLISESRTRGC 635
Score = 67 (28.6 bits), Expect = 2.2e-37, Sum P(3) = 2.2e-37
Identities = 14/22 (63%), Positives = 17/22 (77%)
Query: 276 LIQGPPGTGKTQTILGLLSAIL 297
LI GPP TGKT+T+ LL A+L
Sbjct: 83 LIWGPPRTGKTKTVATLLFALL 104
Score = 49 (22.3 bits), Expect = 2.2e-37, Sum P(3) = 2.2e-37
Identities = 13/53 (24%), Positives = 27/53 (50%)
Query: 379 CAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSV-AIDHLV 430
CAP+N+A+ ++ RLL+ + + T ++ I L + + DH++
Sbjct: 113 CAPTNTAIVQVTSRLLSLFKENSTAENATYRLGNIILSGNRDRMGINKNDHVL 165
>GENEDB_PFALCIPARUM|MAL7P1.12 [details] [associations]
symbol:MAL7P1.12 "erythrocyte
membrane-associated antigen" species:5833 "Plasmodium falciparum"
[GO:0016020 "membrane" evidence=ISS] GO:GO:0016020
InterPro:IPR014001 SMART:SM00487 EMBL:AL844506
RefSeq:XP_001348968.1 ProteinModelPortal:Q8IC35 IntAct:Q8IC35
MINT:MINT-1611439 EnsemblProtists:MAL7P1.12:mRNA GeneID:2655186
KEGG:pfa:MAL7P1.12 EuPathDB:PlasmoDB:PF3D7_0703500
HOGENOM:HOG000283891 ProtClustDB:CLSZ2433351 Uniprot:Q8IC35
Length = 2283
Score = 412 (150.1 bits), Expect = 6.3e-37, Sum P(2) = 6.3e-37
Identities = 125/432 (28%), Positives = 212/432 (49%)
Query: 380 APSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQKRDDSAA 439
A SN A + +V G++ NI++ VR+G + + AI +E R
Sbjct: 1828 ADSNVAANNLV-----EGLKKRNIQA-----VRVGAGSDSDFHEEAI---MEFHRYKDLL 1874
Query: 440 DKQKHGATRKDRDSIRSAILNEAV----IVCSTLSFSGSALLSKLNHGFDVVIIDEAAQA 495
+K+ +K+ +++ + EAV +V +T SG + N F+ VIIDE AQ+
Sbjct: 1875 KLRKNNM-QKEAKVMKALLFLEAVKKYNVVIATCVGSGHEIFD--NEKFERVIIDECAQS 1931
Query: 496 VEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGY-PVKMLKT 554
+EP+ L+PL C + L+GD QLP T+ISP A LG SL +R A PV +L T
Sbjct: 1932 IEPSNLIPLGHYCNNLVLIGDHKQLPPTIISPDAIKLGLDKSLLERFVMAKIAPVHLLNT 1991
Query: 555 QYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRD----WHEYRCFGPFSFFDIHEGKES- 609
Q RMH + FP+ FYD L+ + E+ W +C +F D+ GK
Sbjct: 1992 QRRMHLSICVFPNFHFYDNKLKTANVTEENRPIIKGFLWPNPKC--RLAFIDVSIGKPGS 2049
Query: 610 --QPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETF 667
+ A S N+ E++ ++ + +I+ S ++ I++ Y Q + ++ ++ F
Sbjct: 2050 KFENAYGTSKFNLYEIEPLITVLKSIIN--EGCVSVDEIGILTAYDAQKMKLKKAVQDAF 2107
Query: 668 GVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVV 727
E+ ++I ++DG QG+EKD+ +FS VR++ +GFL D RR+NV +TRAK +++
Sbjct: 2108 SYEASHRIEIDSIDGFQGKEKDLILFSAVRSNANNELGFLRDARRLNVMLTRAKRGVILF 2167
Query: 728 GCASTLREDK-HWNNLVKSAEKQDCLFRVSK-----PYASFFSDENLESMRKNATTDNVQ 781
G TL D +W +K + + V+K + + L + K N+
Sbjct: 2168 GDQFTLANDPANWLPWLKWISSKRAIVHVTKLNDHLENTDYSLLDKLNKINKAVNLKNIN 2227
Query: 782 GADGHVPHDDET 793
+D + + ++T
Sbjct: 2228 VSDNYYFYGNDT 2239
Score = 78 (32.5 bits), Expect = 6.3e-37, Sum P(2) = 6.3e-37
Identities = 27/77 (35%), Positives = 37/77 (48%)
Query: 223 PFKDLILSASEKSSGSQDQSWKIPGLLHEYIK--ENH--NASQLEAIHEGLLRKAFVLIQ 278
P++DL+ + K G+ Q I L E I N N SQ A L R+ L+Q
Sbjct: 1740 PYEDLLNESINKQIGNS-QVEDIDKYLIESINLPTNLPLNDSQKLACLSALTRR-LTLVQ 1797
Query: 279 GPPGTGKTQTILGLLSA 295
GPPGTGKT ++ +
Sbjct: 1798 GPPGTGKTHVACAIIDS 1814
Score = 38 (18.4 bits), Expect = 9.9e-33, Sum P(2) = 9.9e-33
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 234 KSSGSQDQSWKIPGLLHEYIKENHN 258
K+SGS S + ++Y+ N+N
Sbjct: 167 KASGSYINSGNVNVSSNQYVNSNNN 191
>UNIPROTKB|Q8IC35 [details] [associations]
symbol:MAL7P1.12 "Erythrocyte membrane-associated antigen"
species:36329 "Plasmodium falciparum 3D7" [GO:0016020 "membrane"
evidence=ISS] GO:GO:0016020 InterPro:IPR014001 SMART:SM00487
EMBL:AL844506 RefSeq:XP_001348968.1 ProteinModelPortal:Q8IC35
IntAct:Q8IC35 MINT:MINT-1611439 EnsemblProtists:MAL7P1.12:mRNA
GeneID:2655186 KEGG:pfa:MAL7P1.12 EuPathDB:PlasmoDB:PF3D7_0703500
HOGENOM:HOG000283891 ProtClustDB:CLSZ2433351 Uniprot:Q8IC35
Length = 2283
Score = 412 (150.1 bits), Expect = 6.3e-37, Sum P(2) = 6.3e-37
Identities = 125/432 (28%), Positives = 212/432 (49%)
Query: 380 APSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQKRDDSAA 439
A SN A + +V G++ NI++ VR+G + + AI +E R
Sbjct: 1828 ADSNVAANNLV-----EGLKKRNIQA-----VRVGAGSDSDFHEEAI---MEFHRYKDLL 1874
Query: 440 DKQKHGATRKDRDSIRSAILNEAV----IVCSTLSFSGSALLSKLNHGFDVVIIDEAAQA 495
+K+ +K+ +++ + EAV +V +T SG + N F+ VIIDE AQ+
Sbjct: 1875 KLRKNNM-QKEAKVMKALLFLEAVKKYNVVIATCVGSGHEIFD--NEKFERVIIDECAQS 1931
Query: 496 VEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGY-PVKMLKT 554
+EP+ L+PL C + L+GD QLP T+ISP A LG SL +R A PV +L T
Sbjct: 1932 IEPSNLIPLGHYCNNLVLIGDHKQLPPTIISPDAIKLGLDKSLLERFVMAKIAPVHLLNT 1991
Query: 555 QYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRD----WHEYRCFGPFSFFDIHEGKES- 609
Q RMH + FP+ FYD L+ + E+ W +C +F D+ GK
Sbjct: 1992 QRRMHLSICVFPNFHFYDNKLKTANVTEENRPIIKGFLWPNPKC--RLAFIDVSIGKPGS 2049
Query: 610 --QPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETF 667
+ A S N+ E++ ++ + +I+ S ++ I++ Y Q + ++ ++ F
Sbjct: 2050 KFENAYGTSKFNLYEIEPLITVLKSIIN--EGCVSVDEIGILTAYDAQKMKLKKAVQDAF 2107
Query: 668 GVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVV 727
E+ ++I ++DG QG+EKD+ +FS VR++ +GFL D RR+NV +TRAK +++
Sbjct: 2108 SYEASHRIEIDSIDGFQGKEKDLILFSAVRSNANNELGFLRDARRLNVMLTRAKRGVILF 2167
Query: 728 GCASTLREDK-HWNNLVKSAEKQDCLFRVSK-----PYASFFSDENLESMRKNATTDNVQ 781
G TL D +W +K + + V+K + + L + K N+
Sbjct: 2168 GDQFTLANDPANWLPWLKWISSKRAIVHVTKLNDHLENTDYSLLDKLNKINKAVNLKNIN 2227
Query: 782 GADGHVPHDDET 793
+D + + ++T
Sbjct: 2228 VSDNYYFYGNDT 2239
Score = 78 (32.5 bits), Expect = 6.3e-37, Sum P(2) = 6.3e-37
Identities = 27/77 (35%), Positives = 37/77 (48%)
Query: 223 PFKDLILSASEKSSGSQDQSWKIPGLLHEYIK--ENH--NASQLEAIHEGLLRKAFVLIQ 278
P++DL+ + K G+ Q I L E I N N SQ A L R+ L+Q
Sbjct: 1740 PYEDLLNESINKQIGNS-QVEDIDKYLIESINLPTNLPLNDSQKLACLSALTRR-LTLVQ 1797
Query: 279 GPPGTGKTQTILGLLSA 295
GPPGTGKT ++ +
Sbjct: 1798 GPPGTGKTHVACAIIDS 1814
Score = 38 (18.4 bits), Expect = 9.9e-33, Sum P(2) = 9.9e-33
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 234 KSSGSQDQSWKIPGLLHEYIKENHN 258
K+SGS S + ++Y+ N+N
Sbjct: 167 KASGSYINSGNVNVSSNQYVNSNNN 191
>TAIR|locus:2056896 [details] [associations]
symbol:AT2G03270 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR004483
SMART:SM00382 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0004386 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 EMBL:AC005313 EMBL:AC006284 HOGENOM:HOG000185831
TIGRFAMs:TIGR00376 UniGene:At.10455 UniGene:At.71239 EMBL:AY045820
EMBL:AY091361 IPI:IPI00521943 PIR:T02699 RefSeq:NP_565299.1
ProteinModelPortal:O81047 SMR:O81047 STRING:O81047 PaxDb:O81047
PRIDE:O81047 EnsemblPlants:AT2G03270.1 GeneID:814856
KEGG:ath:AT2G03270 TAIR:At2g03270 InParanoid:O81047 OMA:GHPSRVS
PhylomeDB:O81047 ProtClustDB:CLSN2687941 ArrayExpress:O81047
Genevestigator:O81047 Uniprot:O81047
Length = 639
Score = 354 (129.7 bits), Expect = 6.5e-34, Sum P(3) = 6.5e-34
Identities = 126/379 (33%), Positives = 191/379 (50%)
Query: 383 NSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQKRDDSAADKQ 442
+SALD VL+ N+G+ ++ IR + LKA N+ L++++ K+
Sbjct: 275 DSALDAQVLKGDNSGLAND-IRKEMKALNGKLLKAKDK-NT---RRLIQKEL--RTLGKE 327
Query: 443 KHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKL-NHGFDVVIIDEAAQAVEPATL 501
+ RK + S ++ A ++ +TL+ AL KL N FD+VIIDE AQA+E A
Sbjct: 328 E----RKRQQLAVSDVIKNADVILTTLT---GALTRKLDNRTFDLVIIDEGAQALEVACW 380
Query: 502 VPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRA-GYPVK-MLKTQYRMH 559
+ L G + + L GD +QLP T+ S AE G G +LF+RL G +K ML QYRMH
Sbjct: 381 IALLKGSRCI-LAGDHLQLPPTIQSAEAERKGLGRTLFERLADLYGDEIKSMLTVQYRMH 439
Query: 560 PEVRSFPSREFYDEALEDGS--------DVEDYTTRDWHEYRCF-GPFSFFDIHEGKESQ 610
+ ++ S+E YD + S D+E+ T E + D+ E K+ +
Sbjct: 440 ELIMNWSSKELYDNKITAHSSVASHMLFDLENVTKSSSTEATLLLVDTAGCDMEEKKDEE 499
Query: 611 PAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQE-RFKETFGV 669
S N E + + +L+ Q S + II+PY QV + R KE
Sbjct: 500 E----STYNEGEAEVAMAHAKRLMESGVQ---PSDIGIITPYAAQVMLLRILRGKE---- 548
Query: 670 ESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGC 729
E K ++I+TVDG QGREK+ I S VR++ KK +GFL D RRMNV +TR++ +V
Sbjct: 549 EKLKDMEISTVDGFQGREKEAIIISMVRSNSKKEVGFLKDQRRMNVAVTRSRRQCCIVCD 608
Query: 730 ASTLREDKHWNNLVKSAEK 748
T+ D +++ E+
Sbjct: 609 TETVSSDAFLKRMIEYFEE 627
Score = 84 (34.6 bits), Expect = 6.5e-34, Sum P(3) = 6.5e-34
Identities = 17/39 (43%), Positives = 26/39 (66%)
Query: 255 ENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLL 293
+N + SQ +AI + L K L+ GPPGTGKT T++ ++
Sbjct: 188 KNLDQSQKDAITKALSSKDVFLLHGPPGTGKTTTVVEIV 226
Score = 46 (21.3 bits), Expect = 6.5e-34, Sum P(3) = 6.5e-34
Identities = 10/16 (62%), Positives = 12/16 (75%)
Query: 379 CAPSNSALDEIVLRLL 394
CA SN A+D IV RL+
Sbjct: 239 CAASNIAVDNIVERLV 254
>POMBASE|SPCC737.07c [details] [associations]
symbol:SPCC737.07c "DNA polymerase alpha-associated DNA
helicase A (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006273
"lagging strand elongation" evidence=ISO] [GO:0033203 "DNA helicase
A complex" evidence=ISO] [GO:0043141 "ATP-dependent 5'-3' DNA
helicase activity" evidence=ISO] [GO:0043596 "nuclear replication
fork" evidence=IC] [GO:0005658 "alpha DNA polymerase:primase
complex" evidence=ISO] InterPro:IPR003593 SMART:SM00382
PomBase:SPCC737.07c GO:GO:0005829 GO:GO:0005524 EMBL:CU329672
GenomeReviews:CU329672_GR eggNOG:COG1112 GO:GO:0006273
GO:GO:0043141 PIR:T41580 RefSeq:NP_588369.1
ProteinModelPortal:O94247 STRING:O94247 EnsemblFungi:SPCC737.07c.1
GeneID:2539412 KEGG:spo:SPCC737.07c HOGENOM:HOG000185831
OMA:ERTIFLE OrthoDB:EOG444PTN NextBio:20800576 GO:GO:0033203
Uniprot:O94247
Length = 660
Score = 321 (118.1 bits), Expect = 2.9e-32, Sum P(3) = 2.9e-32
Identities = 97/289 (33%), Positives = 148/289 (51%)
Query: 458 ILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDP 517
I++ + +V TL +GS L FD VIIDEA+QA+EP +PL G +V L GD
Sbjct: 359 IVSASKVVFCTLHGAGSRQLK--GQRFDAVIIDEASQALEPQCWIPLL-GMNKVILAGDH 415
Query: 518 VQLPATVISPVAEHLGYGTSLFKRLQRA-GYPVK-MLKTQYRMHPEVRSFPSREFYDEAL 575
+QL SP + S+F+RL ++ G VK L QYRMH + FPS FYD L
Sbjct: 416 MQL-----SPNVQSKRPYISMFERLVKSQGDLVKCFLNIQYRMHELISKFPSDTFYDSKL 470
Query: 576 EDGSDVEDYTTRDWHEYR----CFGPFSFFDIHEGKESQPAGSGSWINI------DEVDF 625
+V+ D P F+D G + S N + +
Sbjct: 471 VPAEEVKKRLLMDLENVEETELTDSPIYFYDTL-GNYQEDDRSEDMQNFYQDSKSNHWEA 529
Query: 626 VLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQG 685
++ +H + + + +A+++PY QV ++ KE G+E V++ +VD QG
Sbjct: 530 QIVSYH-ISGLLEAGLEAKDIAVVTPYNAQVALIRQLLKEK-GIE----VEMGSVDKVQG 583
Query: 686 REKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLR 734
REK+ IFS VR++D + +GFLA+ RR+NV ITR K + V+G ++T++
Sbjct: 584 REKEAIIFSLVRSNDVREVGFLAEKRRLNVAITRPKRHLCVIGDSNTVK 632
Score = 103 (41.3 bits), Expect = 2.9e-32, Sum P(3) = 2.9e-32
Identities = 37/116 (31%), Positives = 62/116 (53%)
Query: 187 ITSSVSAVEKRLFSLKICSLSTIAR-EYLALRSVGSLP-FKDLI---LSASEKSSGSQDQ 241
I SSV+ RL +K+ + T R + L S+P +++ + L +K+ S DQ
Sbjct: 142 IPSSVT----RLSVVKLVNRVTYERMRHTMLEFKRSIPEYRNSLFYTLIGRKKADVSIDQ 197
Query: 242 SWKIPGLLHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAIL 297
K+ G + +Y + NASQ +A+ + K LI GPPGTGKT T++ ++ ++
Sbjct: 198 --KLIGDI-KYFNKELNASQKKAVKFSIAVKELSLIHGPPGTGKTHTLVEIIQQLV 250
Score = 50 (22.7 bits), Expect = 2.9e-32, Sum P(3) = 2.9e-32
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 379 CAPSNSALDEIVLRLLNTGI 398
C SN A+D IV RL ++GI
Sbjct: 259 CGASNLAVDNIVDRLSSSGI 278
Score = 40 (19.1 bits), Expect = 9.5e-26, Sum P(3) = 9.5e-26
Identities = 14/61 (22%), Positives = 29/61 (47%)
Query: 219 VGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIKENHNASQLEAIHEGLLRKAFVLIQ 278
+G + + + L+AS+K + + K L+H + +E I + +LR +L+
Sbjct: 200 IGDIKYFNKELNASQKKAVKFSIAVKELSLIHGPPGTGKTHTLVEIIQQLVLRNKRILVC 259
Query: 279 G 279
G
Sbjct: 260 G 260
Score = 39 (18.8 bits), Expect = 1.2e-25, Sum P(3) = 1.2e-25
Identities = 19/87 (21%), Positives = 40/87 (45%)
Query: 133 EFKEG-STFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSV 191
EFK + + + L+ +A++ + L G++ + NK+ SQ+ S+ +
Sbjct: 169 EFKRSIPEYRNSLFYTLIGRKKADV-SIDQKLIGDIKYFNKELNASQKKAVKFSIAVKEL 227
Query: 192 SAVEKRLFSLKICSLSTIAREYLALRS 218
S + + K +L I ++ L LR+
Sbjct: 228 SLIHGPPGTGKTHTLVEIIQQ-LVLRN 253
>FB|FBgn0035842 [details] [associations]
symbol:CG7504 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005875 "microtubule associated complex" evidence=IDA]
InterPro:IPR000253 InterPro:IPR008984 Pfam:PF00498 PROSITE:PS50006
SMART:SM00240 GO:GO:0005875 EMBL:AE014296 GO:GO:0006200
GO:GO:0016887 Gene3D:2.60.200.20 SUPFAM:SSF49879 eggNOG:COG1112
KO:K10706 GeneTree:ENSGT00580000081652 RefSeq:NP_001137907.1
UniGene:Dm.31993 ProteinModelPortal:B7Z0D7 SMR:B7Z0D7 STRING:B7Z0D7
PaxDb:B7Z0D7 EnsemblMetazoa:FBtr0273367 GeneID:38904
KEGG:dme:Dmel_CG7504 FlyBase:FBgn0035842 OMA:NRSKSCY
OrthoDB:EOG4DV42G GenomeRNAi:38904 NextBio:810939 Bgee:B7Z0D7
Uniprot:B7Z0D7
Length = 1676
Score = 345 (126.5 bits), Expect = 3.5e-32, Sum P(4) = 3.5e-32
Identities = 100/325 (30%), Positives = 156/325 (48%)
Query: 447 TRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLAT 506
T+++ I + A I+C+TLS L+ FD+ I+DEA Q EP TL+P+
Sbjct: 1350 TQREEFEISHMCVTRANIICTTLS--SCVKLANYVDFFDICIVDEATQCTEPWTLLPMRF 1407
Query: 507 GCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRA---------GYPV---KMLK- 553
G + LVGD QLPA V+S A G S+F R+QR+ Y + K+ K
Sbjct: 1408 GLTHMVLVGDMQQLPAVVLSKKAIDFGLSNSMFDRIQRSLQTQLDKPGSYHLMHTKLFKL 1467
Query: 554 -TQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPA 612
TQYRMHPE+ +P++ FY++ L + + + P+ ++ +S A
Sbjct: 1468 STQYRMHPEICRWPNQYFYEDQLINAECTARFASP-------LIPYCVINLKYTCDSNGA 1520
Query: 613 GSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQ 672
+ S N +E FV L ++ P + S +ISPY++Q + + Q
Sbjct: 1521 QNKSISNNEEARFVAKLLTEMDKHMPSKRFS--YGLISPYQNQCYALSQVIPSHMNITPQ 1578
Query: 673 KVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCAST 732
TVD QG EKDV I S R + GFL +Y+R+NV +TR + +++ G
Sbjct: 1579 ------TVDSYQGLEKDVIIISNART---RGCGFLTNYQRLNVALTRPRRCLVICGNFED 1629
Query: 733 LREDKHWNNLVKSAEKQDCLFRVSK 757
L+ + W NL+ A K+ F + +
Sbjct: 1630 LKSVEMWRNLLDDARKRKVYFNLDR 1654
Score = 99 (39.9 bits), Expect = 3.5e-32, Sum P(4) = 3.5e-32
Identities = 48/170 (28%), Positives = 81/170 (47%)
Query: 142 TTYAFALVEHCQANLLRLRMYLAGEVIHIN----KDAVKSQRLLNIHSLITSSVSAVEKR 197
T Y +++ ANLL L+ +++G V + K + ++L NI L V V+
Sbjct: 1069 TLYCCGMLKETFANLLELK-FVSGNVFDLTFEILKQDISEEKLKNIKQLTARPV--VD-- 1123
Query: 198 LFSLKICSLSTIAREYLALRSVGSLPFKDLIL----SASEKSSGSQDQSWKIPGLLHEYI 253
SL++ L ++ A+ + S P IL + +E S Q ++K L+E+
Sbjct: 1124 --SLRV-ELGALS----AVHQLRSSPLCRRILKPTQTVNEVSLPKQPFTFKGCHKLNEH- 1175
Query: 254 KENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPAR 303
+EN + I + L + + LIQGPPGTGK++ I L L+ A+
Sbjct: 1176 QENIVLHTYQRIIDDL-QPSLTLIQGPPGTGKSRVISELCLQTLYGNAAK 1224
Score = 54 (24.1 bits), Expect = 3.5e-32, Sum P(4) = 3.5e-32
Identities = 25/96 (26%), Positives = 43/96 (44%)
Query: 379 CAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGL--KAHHSVNSVAID-HLVEQKRD 435
CA SN+A+D IV LL + +R N + ++R G+ K H +++ H + K
Sbjct: 1233 CAHSNTAVDHIV-GLLGSVLRVMNRDQF--HLLRFGMHEKMSHYSRPFSLEAHFNKAKEQ 1289
Query: 436 D-SAADKQKHGATRKDRDSIRSAI--LNEAVIVCST 468
K+ +K + ++ I L E + ST
Sbjct: 1290 KLQRVSKENAEILKKQHNDLKDEIQQLKEKTNLTST 1325
Score = 44 (20.5 bits), Expect = 3.7e-31, Sum P(4) = 3.7e-31
Identities = 14/42 (33%), Positives = 23/42 (54%)
Query: 289 ILGLLSAILHATPARVHSKGGLREIKRGPELPMHEKYNHWGR 330
I+GLL ++L RV ++ ++ G MHEK +H+ R
Sbjct: 1243 IVGLLGSVL-----RVMNRDQFHLLRFG----MHEKMSHYSR 1275
Score = 42 (19.8 bits), Expect = 2.4e-26, Sum P(4) = 2.4e-26
Identities = 13/49 (26%), Positives = 20/49 (40%)
Query: 181 LNIHSLITSSVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLIL 229
L + S I K FS+ + ++ T Y + V S PF +L
Sbjct: 1019 LELLSTIERDYKINNKNTFSVSLINVETQDMCYRLVTRVNSKPFGKFVL 1067
Score = 39 (18.8 bits), Expect = 3.5e-32, Sum P(4) = 3.5e-32
Identities = 18/74 (24%), Positives = 32/74 (43%)
Query: 54 VKDTYKDVDDYLATFEPLLFEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGFH----LP 109
+K Y+ VD+ + E L+ ++ + + Q K + G H +
Sbjct: 569 LKKKYESVDN---SKEELIVTLEAPAMLTTPTKSKTQCVKKKATQTRGRRKTIHSRDEIR 625
Query: 110 SVTYEADEVESISP 123
S+T EA+E + ISP
Sbjct: 626 SLTAEAEENKKISP 639
Score = 37 (18.1 bits), Expect = 1.2e-25, Sum P(2) = 1.2e-25
Identities = 7/11 (63%), Positives = 9/11 (81%)
Query: 380 APSNSALDEIV 390
+PSN A D+IV
Sbjct: 312 SPSNQAYDDIV 322
>RGD|2322000 [details] [associations]
symbol:LOC100363957 "hypothetical protein LOC100363957"
species:10116 "Rattus norvegicus" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR010666 Pfam:PF06839 RGD:2322000
GO:GO:0008270 GeneTree:ENSGT00550000074391 IPI:IPI00777941
Ensembl:ENSRNOT00000014695 Uniprot:F1M404
Length = 919
Score = 384 (140.2 bits), Expect = 1.1e-31, Sum P(3) = 1.1e-31
Identities = 113/388 (29%), Positives = 197/388 (50%)
Query: 382 SNSALDEIVLRLLNTG----IRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQKRDDS 437
+N A+D ++L LL+ G IR ++R ++ L A S + L R++
Sbjct: 514 TNVAVDRVLLGLLSLGFEKFIRVGSVRKIAKPVLPYSLHASSDNESEQLKELHALMREEL 573
Query: 438 AADKQKHGATRKDRDSIRS--AILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQA 495
++ + ++ + + +L +A +V T + ++ L F VV++DE +Q
Sbjct: 574 TPIERVYVRKSIEQHKLGTNRVLLKQARVVGITCAACPFPCMNDLK--FPVVVLDECSQM 631
Query: 496 VEPATLVPLAT-GCKQVFLVGDPVQLPATVISPVAEH-LGYGTSLFKRLQRAGYPVKMLK 553
EPA+L+P+A C+++ LVGDP QLP T+ A H G +LF RL G+ L+
Sbjct: 632 TEPASLLPIARFECEKLILVGDPKQLPPTIQGSDAAHGNGLEQTLFDRLCLMGHKPIQLR 691
Query: 554 TQYRMHPEVRSFPSREFYDEALEDG-SDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPA 612
TQYR HP + + + FY+ L +G S+ E +W CF +++ G E Q
Sbjct: 692 TQYRCHPVISAIANDLFYEGNLVNGISERERSPVLEWLPTLCF-----YNV-TGTE-QVE 744
Query: 613 GSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQ 672
S++N+ E F L L LI+ + S + +I+ Y+ Q+ + V+
Sbjct: 745 RENSFVNVAEAAFTLKLIRSLIASGLE---GSMIGVITLYKSQMYKICSLLSAV-DVDHP 800
Query: 673 --KVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCA 730
K V+++TVD QG EK++ I SCVR + +GF+ +RMNV +TR + +L++G
Sbjct: 801 DVKAVEVSTVDAFQGAEKEIIILSCVRT---RQVGFIDSEKRMNVALTRGRRHLLIIGSL 857
Query: 731 STLREDKHWNNLVKSAE-KQDCLFRVSK 757
S LR+++ W +++ + ++D L S+
Sbjct: 858 SCLRKNQLWGRVIQHCKGREDGLQHASQ 885
Score = 45 (20.9 bits), Expect = 1.1e-31, Sum P(3) = 1.1e-31
Identities = 8/29 (27%), Positives = 16/29 (55%)
Query: 166 EVIHINKDAVKSQRLLNIHSLITSSVSAV 194
E++H+ ++ L+N+H L SA+
Sbjct: 412 ELLHLGATLQLARELINVHRLNNDQASAL 440
Score = 43 (20.2 bits), Expect = 1.1e-31, Sum P(3) = 1.1e-31
Identities = 23/92 (25%), Positives = 38/92 (41%)
Query: 59 KDVDDYLATFEPLLFEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTY---EA 115
K + YL + + ++EE + + + D ++ Q KL+ + S Y
Sbjct: 228 KSIGSYLRSQKIAVYEECQLLLRKGFDFQKKQHGKLKKLATVNPEFYSETKSKLYLKLSR 287
Query: 116 DEVESI-SPNDLLLLSKEEFKEGSTFPTTYAF 146
E S+ S DL ++SK E TF AF
Sbjct: 288 KESSSVYSKGDLWVISKTLDFELDTFIACSAF 319
>TAIR|locus:2162858 [details] [associations]
symbol:AT5G35970 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0009570 "chloroplast
stroma" evidence=IDA] [GO:0015996 "chlorophyll catabolic process"
evidence=RCA] EMBL:CP002688 GO:GO:0009570 GO:GO:0003677
GO:GO:0009941 InterPro:IPR014001 SMART:SM00487 IPI:IPI00520082
RefSeq:NP_198446.3 UniGene:At.45828 ProteinModelPortal:F4K1G7
SMR:F4K1G7 PRIDE:F4K1G7 EnsemblPlants:AT5G35970.1 GeneID:833589
KEGG:ath:AT5G35970 OMA:DHFQREL Uniprot:F4K1G7
Length = 961
Score = 350 (128.3 bits), Expect = 1.9e-31, Sum P(2) = 1.9e-31
Identities = 105/304 (34%), Positives = 159/304 (52%)
Query: 448 RKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATG 507
+K++++++ IL+ A +V +T + L+ +L FD+V+IDEA Q++EP+ +P+ G
Sbjct: 628 KKEKETVKE-ILSNAQVVFATNIGAADPLIRRLET-FDLVVIDEAGQSIEPSCWIPILQG 685
Query: 508 CKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRA--GYPVKMLKTQYRMHPEVRSF 565
K+ L GDP QL V+S A G G SL +R G L TQYRM+ + +
Sbjct: 686 -KRCILSGDPCQLAPVVLSRKALEGGLGVSLLERAASLHDGVLATKLTTQYRMNDVIAGW 744
Query: 566 PSREFYDEALEDGSDVEDYTTRD-------WHEYRCFGPFSFFD-------IHEGKESQ- 610
S+E Y L+ V + D W +C P D + G E +
Sbjct: 745 ASKEMYGGWLKSAPSVASHLLIDSPFVKATWIT-QC--PLVLLDTRMPYGSLSVGCEERL 801
Query: 611 -PAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGV 669
PAG+GS N E D V+ H + +Y + S +A+ SPY QV+ +ER + F V
Sbjct: 802 DPAGTGSLYNEGEADIVVN--HVISLIYAGV-SPMAIAVQSPYVAQVQLLRERLDD-FPV 857
Query: 670 ESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGC 729
V++ T+D QGRE D I S VR+++ ++GFL D RRMNV ITRA+ + VV
Sbjct: 858 ADG--VEVATIDSFQGREADAVIISMVRSNNLGAVGFLGDSRRMNVAITRARKHVAVVCD 915
Query: 730 ASTL 733
+ST+
Sbjct: 916 SSTI 919
Score = 80 (33.2 bits), Expect = 1.9e-31, Sum P(2) = 1.9e-31
Identities = 22/56 (39%), Positives = 32/56 (57%)
Query: 243 WKIPGLLHEYIKENHNASQLEAIHEGLLRKAFVLI-QGPPGTGKTQTILGLLSAIL 297
W L E + + ++SQ AI G+ +K V+I QGPPGTGKT G+L ++
Sbjct: 473 WSEAELSDEPVSKLFDSSQRRAIALGVNKKRPVMIVQGPPGTGKT----GMLKEVI 524
Score = 74 (31.1 bits), Expect = 7.9e-31, Sum P(2) = 7.9e-31
Identities = 36/128 (28%), Positives = 56/128 (43%)
Query: 336 VGANPRDNIMPIDGDDGFFPTTGNELKPEXXXXXXXXXXXXXXCAPSNSALDEIVLRLLN 395
+G N + +M + G G T LK E AP+N+A+D +V +LL+
Sbjct: 497 LGVNKKRPVMIVQGPPGTGKT--GMLK-EVITLAVQQGERVLVTAPTNAAVDNMVEKLLH 553
Query: 396 TGIRDENIRSYTPKIVRIGLKAHHS--VNSVAIDHLVEQKRDDSAAD-KQKHGATRKD-R 451
G+ IVR+G A S V S ++ +V K A+ ++K RKD R
Sbjct: 554 LGLN----------IVRVGNPARISSAVASKSLGEIVNSKLASFRAELERKKSDLRKDLR 603
Query: 452 DSIRSAIL 459
+R +L
Sbjct: 604 QCLRDDVL 611
>UNIPROTKB|Q6ZU11 [details] [associations]
symbol:Q6ZU11 "Uncharacterized protein FLJ44066"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR010666 Pfam:PF06839 GO:GO:0016021 GO:GO:0008270
eggNOG:COG1112 UniGene:Hs.713663 EMBL:AK126054 EMBL:AL137700
IPI:IPI00300207 IPI:IPI00880006 PIR:T46441 RefSeq:NP_060862.3
UniGene:Hs.380346 ProteinModelPortal:Q6ZU11 SMR:Q6ZU11
PhosphoSite:Q6ZU11 DMDM:74711848 PaxDb:Q6ZU11 PRIDE:Q6ZU11
GeneID:55345 KEGG:hsa:55345 CTD:55345 HPA:HPA030706
neXtProt:NX_Q6ZU11 PharmGKB:PA144596502 HOGENOM:HOG000155510
InParanoid:Q6ZU11 PhylomeDB:Q6ZU11 GenomeRNAi:55345 NextBio:59679
ArrayExpress:Q6ZU11 Bgee:Q6ZU11 Genevestigator:Q6ZU11
Uniprot:Q6ZU11
Length = 926
Score = 389 (142.0 bits), Expect = 2.3e-31, Sum P(2) = 2.3e-31
Identities = 114/382 (29%), Positives = 194/382 (50%)
Query: 382 SNSALDEIVLRLLNTG----IRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQKRDDS 437
+N A+D ++L LL+ G IR ++R I+ L A S + L ++D
Sbjct: 519 TNVAVDRVLLGLLSLGFENFIRVGSVRKIAKPILPYSLHAGSENESEQLKELHALMKEDL 578
Query: 438 AADKQKHGATRKDRDSIRS--AILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQA 495
++ + ++ + + +L + +V T + ++ L F VV++DE +Q
Sbjct: 579 TPTERVYVRKSIEQHKLGTNRTLLKQVRVVGVTCAACPFPCMNDLK--FPVVVLDECSQI 636
Query: 496 VEPATLVPLAT-GCKQVFLVGDPVQLPATVISPVAEHL-GYGTSLFKRLQRAGYPVKMLK 553
EPA+L+P+A C+++ LVGDP QLP T+ A H G +LF RL G+ +L+
Sbjct: 637 TEPASLLPIARFECEKLILVGDPKQLPPTIQGSDAAHENGLEQTLFDRLCLMGHKPILLR 696
Query: 554 TQYRMHPEVRSFPSREFYDEALEDG-SDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPA 612
TQYR HP + + + FY AL +G +++E +W CF +++ +G E Q
Sbjct: 697 TQYRCHPAISAIANDLFYKGALMNGVTEIERSPLLEWLPTLCF-----YNV-KGLE-QIE 749
Query: 613 GSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKET-FGVES 671
S+ N+ E F L L LI+ + S + +I+ Y+ Q+ + F
Sbjct: 750 RDNSFHNVAEATFTLKLIQSLIASGI---AGSMIGVITLYKSQMYKLCHLLSAVDFHHPD 806
Query: 672 QKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCAS 731
K V ++TVD QG EK++ I SCVR + +GF+ +RMNV +TR K +L+VG +
Sbjct: 807 IKTVQVSTVDAFQGAEKEIIILSCVRT---RQVGFIDSEKRMNVALTRGKRHLLIVGNLA 863
Query: 732 TLREDKHWNNLVKSAE-KQDCL 752
LR+++ W +++ E ++D L
Sbjct: 864 CLRKNQLWGRVIQHCEGREDGL 885
Score = 37 (18.1 bits), Expect = 2.3e-31, Sum P(2) = 2.3e-31
Identities = 23/93 (24%), Positives = 39/93 (41%)
Query: 59 KDVDDYLATFEPLLFEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVT-Y---- 113
K + YL + + L+EE + + + D + Q KL+ + ++ P Y
Sbjct: 233 KSIGLYLRSQKIPLYEECQLLVRKGFDFQRKQYGKLKKFTTVNP-EFYNEPKTKLYLKLS 291
Query: 114 EADEVESISPNDLLLLSKEEFKEGSTFPTTYAF 146
+ + S NDL ++SK E TF AF
Sbjct: 292 RKERSSAYSKNDLWVVSKTLDFELDTFIACSAF 324
>UNIPROTKB|E1BQD2 [details] [associations]
symbol:C4H4orf21 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR010666 Pfam:PF06839 GO:GO:0008270
GeneTree:ENSGT00550000074391 OMA:HKLGTNK EMBL:AADN02009328
IPI:IPI00577016 Ensembl:ENSGALT00000019715 Uniprot:E1BQD2
Length = 913
Score = 379 (138.5 bits), Expect = 2.5e-31, Sum P(3) = 2.5e-31
Identities = 115/382 (30%), Positives = 188/382 (49%)
Query: 382 SNSALDEIVLRLLNTGIRD----ENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQKRDDS 437
+N A+D I+L LL+ G D +IR T I+ L A + + L+ ++D
Sbjct: 515 TNVAVDRILLCLLDLGFEDFIRVGSIRKITKAILPYSLHAGSGNENEQLKELLALMKEDL 574
Query: 438 AADKQKHGATRKDRDSI--RSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQA 495
A ++ + +R + L + +V T + L L F VV++DE +Q
Sbjct: 575 APAEKMYVRKSIERHKLGTNKTALQQVKVVGVTCAACPFPCLDTLK--FPVVVLDECSQM 632
Query: 496 VEPATLVPLAT-GCKQVFLVGDPVQLPATVISPVAEH-LGYGTSLFKRLQRAGYPVKMLK 553
EP +L+P+A C+++ LVGDP QLP T+ + H G +LF RL G+ +L+
Sbjct: 633 TEPTSLLPIARFQCEKLVLVGDPKQLPPTIQGSESIHEKGLEQTLFDRLCLMGHKTILLR 692
Query: 554 TQYRMHPEVRSFPSREFYDEALEDG-SDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPA 612
TQYR HP + + + FY+ L DG S+ E DW CF + ++ G E Q
Sbjct: 693 TQYRCHPAISAIANELFYEGNLIDGVSEKERSPLLDWLPTLCF-----YSVN-GLE-QIE 745
Query: 613 GSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFK----ETFG 668
S+ N+ EV F + LI+ S + +I+ Y+ Q+ + Q + E F
Sbjct: 746 RDNSFYNMAEVHFTVKFIQALIASGID---GSAVGVITFYKSQMYKLQNLLRSIHSEAFP 802
Query: 669 VESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVG 728
V K V ++TVD QG EK++ + SCVR + GF +RMNV +TRAK +L+VG
Sbjct: 803 V---KAVQVSTVDAFQGAEKEIVVLSCVRT---RQTGFTDSEKRMNVALTRAKRHLLIVG 856
Query: 729 CASTLREDKHWNNLVKSAEKQD 750
+ L +++ + ++ + ++
Sbjct: 857 NLACLSKNRLYERVINHCKGRE 878
Score = 49 (22.3 bits), Expect = 2.5e-31, Sum P(3) = 2.5e-31
Identities = 15/47 (31%), Positives = 26/47 (55%)
Query: 167 VIHINKDAVKSQRLLNIHSLITSSVSAVEKRLFSLKICSLST-IARE 212
++ +N D+ KS R +N I ++S V K+ + S+ST +A E
Sbjct: 382 LLKMNSDSEKSTRRINKRKFIPPAMSLVGKKTYG----SVSTEVAME 424
Score = 42 (19.8 bits), Expect = 8.5e-31, Sum P(2) = 8.5e-31
Identities = 16/62 (25%), Positives = 28/62 (45%)
Query: 171 NKDAVKSQRLLNIHSLITSSVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILS 230
N+D + ++LL++H T +K L L C T + + + + S P D +
Sbjct: 40 NQDLISERKLLSLHLNQTPLTEPAQKVLSHLT-CRTVTGDVQDITVSEL-SFPNADKVKH 97
Query: 231 AS 232
AS
Sbjct: 98 AS 99
Score = 41 (19.5 bits), Expect = 2.5e-31, Sum P(3) = 2.5e-31
Identities = 14/72 (19%), Positives = 29/72 (40%)
Query: 101 GEADGFHLPSVTY-EADEVESISPNDLLLLSKEEFKEGSTFPTTYAFALVEHCQANLLRL 159
G+ + +++ AD+V+ S + EF+ + + AL EH L L
Sbjct: 77 GDVQDITVSELSFPNADKVKHASLPKRKIAIPTEFQSHVHYRQVFKAALTEHLNIMLFEL 136
Query: 160 RMYLAGEVIHIN 171
L ++ ++
Sbjct: 137 SQRLHSALLKVD 148
>UNIPROTKB|G5EA02 [details] [associations]
symbol:C4orf21 "Uncharacterized protein C4orf21"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR010666 Pfam:PF06839 GO:GO:0008270
EMBL:CH471057 InterPro:IPR018838 Pfam:PF10382 UniGene:Hs.713663
RefSeq:NP_060862.3 UniGene:Hs.380346 GeneID:55345 KEGG:hsa:55345
CTD:55345 GenomeRNAi:55345 NextBio:59679 EMBL:AC106864
EMBL:AC023886 PRIDE:G5EA02 Ensembl:ENST00000505019 HGNC:HGNC:25654
OMA:NTYESSG ArrayExpress:G5EA02 Bgee:G5EA02 Uniprot:G5EA02
Length = 2104
Score = 389 (142.0 bits), Expect = 8.2e-31, Sum P(2) = 8.2e-31
Identities = 114/382 (29%), Positives = 194/382 (50%)
Query: 382 SNSALDEIVLRLLNTG----IRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQKRDDS 437
+N A+D ++L LL+ G IR ++R I+ L A S + L ++D
Sbjct: 1697 TNVAVDRVLLGLLSLGFENFIRVGSVRKIAKPILPYSLHAGSENESEQLKELHALMKEDL 1756
Query: 438 AADKQKHGATRKDRDSIRS--AILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQA 495
++ + ++ + + +L + +V T + ++ L F VV++DE +Q
Sbjct: 1757 TPTERVYVRKSIEQHKLGTNRTLLKQVRVVGVTCAACPFPCMNDLK--FPVVVLDECSQI 1814
Query: 496 VEPATLVPLAT-GCKQVFLVGDPVQLPATVISPVAEHL-GYGTSLFKRLQRAGYPVKMLK 553
EPA+L+P+A C+++ LVGDP QLP T+ A H G +LF RL G+ +L+
Sbjct: 1815 TEPASLLPIARFECEKLILVGDPKQLPPTIQGSDAAHENGLEQTLFDRLCLMGHKPILLR 1874
Query: 554 TQYRMHPEVRSFPSREFYDEALEDG-SDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPA 612
TQYR HP + + + FY AL +G +++E +W CF +++ +G E Q
Sbjct: 1875 TQYRCHPAISAIANDLFYKGALMNGVTEIERSPLLEWLPTLCF-----YNV-KGLE-QIE 1927
Query: 613 GSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKET-FGVES 671
S+ N+ E F L L LI+ + S + +I+ Y+ Q+ + F
Sbjct: 1928 RDNSFHNVAEATFTLKLIQSLIASGI---AGSMIGVITLYKSQMYKLCHLLSAVDFHHPD 1984
Query: 672 QKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCAS 731
K V ++TVD QG EK++ I SCVR + +GF+ +RMNV +TR K +L+VG +
Sbjct: 1985 IKTVQVSTVDAFQGAEKEIIILSCVRT---RQVGFIDSEKRMNVALTRGKRHLLIVGNLA 2041
Query: 732 TLREDKHWNNLVKSAE-KQDCL 752
LR+++ W +++ E ++D L
Sbjct: 2042 CLRKNQLWGRVIQHCEGREDGL 2063
Score = 43 (20.2 bits), Expect = 8.2e-31, Sum P(2) = 8.2e-31
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 100 CGEADGFHLPSVTYEADE 117
C E +G HLP +T +D+
Sbjct: 581 CEEIEGEHLPFLTSVSDK 598
Score = 39 (18.8 bits), Expect = 2.1e-30, Sum P(2) = 2.1e-30
Identities = 13/48 (27%), Positives = 20/48 (41%)
Query: 128 LLSKEEFKEGSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAV 175
L+ +EE E + Y E+ N R MYL+ + I+ V
Sbjct: 296 LIQQEECAEMKSTENLYYQHQSENTMRNKSRWAMYLSSQSSPIHSSTV 343
Score = 39 (18.8 bits), Expect = 2.1e-30, Sum P(2) = 2.1e-30
Identities = 19/109 (17%), Positives = 47/109 (43%)
Query: 49 LGLREVKDTYKDVDDY---LATFEPLLFEEVKAQIIQKKDEEEVQEWKLR--LVMECGEA 103
+G+ + ++T K++++Y L+ FE + + ++ + +QE ++ + ++
Sbjct: 623 MGICKTENTGKEIEEYSDTLSNFESFKWTDAVYGDNKEDANKPIQEVRINYDFALPPNKS 682
Query: 104 DGF----HLPSVTYEADE-----VESISPNDLLLLSKEEFKEGSTFPTT 143
G H+P + + E E P +L S + + P+T
Sbjct: 683 KGINMNLHIPHIQNQIAENSNLFSEDAQPQPFILGSDLDKNDEHVLPST 731
Score = 37 (18.1 bits), Expect = 3.5e-30, Sum P(2) = 3.5e-30
Identities = 23/93 (24%), Positives = 39/93 (41%)
Query: 59 KDVDDYLATFEPLLFEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVT-Y---- 113
K + YL + + L+EE + + + D + Q KL+ + ++ P Y
Sbjct: 1411 KSIGLYLRSQKIPLYEECQLLVRKGFDFQRKQYGKLKKFTTVNP-EFYNEPKTKLYLKLS 1469
Query: 114 EADEVESISPNDLLLLSKEEFKEGSTFPTTYAF 146
+ + S NDL ++SK E TF AF
Sbjct: 1470 RKERSSAYSKNDLWVVSKTLDFELDTFIACSAF 1502
>UNIPROTKB|E1BG37 [details] [associations]
symbol:E1BG37 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR010666 Pfam:PF06839 GO:GO:0008270
GeneTree:ENSGT00550000074391 EMBL:DAAA02016483 IPI:IPI00912094
Ensembl:ENSBTAT00000017567 OMA:HKLGTNK Uniprot:E1BG37
Length = 933
Score = 380 (138.8 bits), Expect = 1.2e-30, Sum P(2) = 1.2e-30
Identities = 108/379 (28%), Positives = 192/379 (50%)
Query: 382 SNSALDEIVLRLLNTG----IRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQKRDDS 437
+N A+D ++L LL+ G +R ++R ++ L A + + L ++D
Sbjct: 520 TNVAVDRVLLGLLSLGFEKFVRVGSVRKIAKPVLPYSLYAGSENENEQLKELHALMKEDL 579
Query: 438 AADKQKHGATRKDRDSI--RSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQA 495
++ + ++ + +L + +V T + ++ L F VV++DE +Q
Sbjct: 580 TPVERVYVRKSIEQHKLGTNKTLLKQVRVVGVTCAACPFPCMNDLK--FPVVVLDECSQM 637
Query: 496 VEPATLVPLAT-GCKQVFLVGDPVQLPATVISPVAEHL-GYGTSLFKRLQRAGYPVKMLK 553
EPA+L+P+A C+++ LVGDP QLP T+ A H G +LF RL G+ +L+
Sbjct: 638 TEPASLLPIARFECEKLILVGDPKQLPPTIQGSDAAHENGLEQTLFDRLCLMGHKPILLR 697
Query: 554 TQYRMHPEVRSFPSREFYDEALEDG-SDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPA 612
TQYR HP + + + FY+ L +G S+ E +W CF +++ +G E
Sbjct: 698 TQYRCHPTISAIANDLFYEGNLMNGISETERSPLLEWLPTLCF-----YNV-KGLEQIER 751
Query: 613 GSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKET-FGVES 671
G+ S+ N+ E F L L LI+ + S + +I+ Y+ Q+ + F +
Sbjct: 752 GN-SFHNVAEAAFTLKLIQSLIASGI---AGSMIGVITLYKSQMYKLCHLLSAMDFDHPN 807
Query: 672 QKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCAS 731
K V ++TVD QG EK++ I SCVR + +GF+ +RMNV +TR + +L+VG +
Sbjct: 808 LKAVQVSTVDAFQGAEKEIIILSCVRT---RQVGFIDSEKRMNVALTRGRRHLLIVGNLA 864
Query: 732 TLREDKHWNNLVKSAEKQD 750
LR+++ W +++ E ++
Sbjct: 865 CLRKNRLWGRVIQHCEGRE 883
Score = 40 (19.1 bits), Expect = 1.2e-30, Sum P(2) = 1.2e-30
Identities = 19/58 (32%), Positives = 26/58 (44%)
Query: 263 EAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLREIKRGPELP 320
EA+ G R +LI + +LGLLS RV G +R+I + P LP
Sbjct: 502 EALTVGNARPWKLLISSSTNVAVDRVLLGLLSLGFEKF-VRV---GSVRKIAK-PVLP 554
>SGD|S000000978 [details] [associations]
symbol:ECM32 "DNA dependent ATPase/DNA helicase" species:4932
"Saccharomyces cerevisiae" [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003678
"DNA helicase activity" evidence=IDA] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0006449 "regulation of translational
termination" evidence=IMP] [GO:0005844 "polysome" evidence=IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] SGD:S000000978 GO:GO:0005524 GO:GO:0005737
GO:GO:0003677 GO:GO:0003723 EMBL:BK006939 GO:GO:0005844
eggNOG:COG1112 GeneTree:ENSGT00700000104467 InterPro:IPR014001
SMART:SM00487 GO:GO:0003678 EMBL:U18922 GO:GO:0003724 PIR:S30862
RefSeq:NP_011103.1 ProteinModelPortal:P32644 SMR:P32644
DIP:DIP-5404N IntAct:P32644 MINT:MINT-499764 STRING:P32644
PaxDb:P32644 PeptideAtlas:P32644 EnsemblFungi:YER176W GeneID:856923
KEGG:sce:YER176W CYGD:YER176w HOGENOM:HOG000094475 OMA:KDTPRGT
OrthoDB:EOG4P8JS8 NextBio:983389 Genevestigator:P32644
GermOnline:YER176W GO:GO:0006449 Uniprot:P32644
Length = 1121
Score = 189 (71.6 bits), Expect = 2.4e-30, Sum P(4) = 2.4e-30
Identities = 71/247 (28%), Positives = 122/247 (49%)
Query: 380 APSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQKRDDS-- 437
A SN A+D I +++ + + +R + K + H + + + ++V +
Sbjct: 700 AASNIAIDNIAEKIMENRPQIKILRILSKKKEQ-QYSDDHPLGEICLHNIVYKNLSPDMQ 758
Query: 438 -AADKQKHGA-------TR--KDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVV 487
A+K + G T+ K+++ + + +++++ I+ +T +G L + VV
Sbjct: 759 VVANKTRRGEMISKSEDTKFYKEKNRVTNKVVSQSQIIFTTNIAAGGRELKVIKE-CPVV 817
Query: 488 IIDEAAQAVEPATLVPLAT-GCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAG 546
I+DEA Q+ E +TLVPL+ G + VGD QL + P E TSLF+R+ G
Sbjct: 818 IMDEATQSSEASTLVPLSLPGIRNFVFVGDEKQLSSFSNIPQLE-----TSLFERVLSNG 872
Query: 547 -Y--PVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDI 603
Y P+ ML TQYRMHP++ FP ++ Y+ L+DG V D + W + P F+
Sbjct: 873 TYKNPL-MLDTQYRMHPKISEFPIKKIYNGELKDG--VTD-EQKAWPGVQ--HPLFFYQC 926
Query: 604 HEGKESQ 610
G ES+
Sbjct: 927 DLGPESR 933
Score = 179 (68.1 bits), Expect = 2.4e-30, Sum P(4) = 2.4e-30
Identities = 36/78 (46%), Positives = 50/78 (64%)
Query: 677 ITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLRE- 735
+ TVD QG EK IFSCVR + + IGFL D RR+NV +TRAK ++VVG + LR+
Sbjct: 1038 VATVDSFQGHEKSFIIFSCVRNNTENKIGFLRDKRRLNVALTRAKHGLIVVGNKNVLRKG 1097
Query: 736 DKHWNNLVKSAEKQDCLF 753
D W + + E+Q+ +F
Sbjct: 1098 DPLWKDYITYLEEQEVIF 1115
Score = 89 (36.4 bits), Expect = 2.4e-30, Sum P(4) = 2.4e-30
Identities = 20/54 (37%), Positives = 32/54 (59%)
Query: 251 EYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAIL---HATP 301
++ + N SQ A+ E +L + ++QGPPGTGKT TI ++ ++ HA P
Sbjct: 643 KFSSDKLNRSQKTAV-EHVLNNSITILQGPPGTGKTSTIEEIIIQVIERFHAFP 695
Score = 65 (27.9 bits), Expect = 2.4e-30, Sum P(4) = 2.4e-30
Identities = 35/123 (28%), Positives = 54/123 (43%)
Query: 31 KESQERN-DKNSKKVDRGKLGLRE---------VKDT--YKDVDDYLATFEPLLFEEVKA 78
K+ + +N +KN+ K GKL E K T Y D++ YL + LF E
Sbjct: 437 KKLETKNQEKNNGKTKDGKLIYEEGEPLTRYNTFKSTLSYPDLNTYLNDYSFALFLE--- 493
Query: 79 QIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEAD-EVESISPNDLLLLSKEEFKEG 137
QK + E VQ + + + E D + +V + E+E + P +LL L + F E
Sbjct: 494 ---QKLENEFVQNFNI--LWPRNEKDTAFIINVEKNNNSELEKLLPANLLALGRPAFNER 548
Query: 138 STF 140
F
Sbjct: 549 QPF 551
Score = 51 (23.0 bits), Expect = 6.4e-29, Sum P(4) = 6.4e-29
Identities = 18/79 (22%), Positives = 34/79 (43%)
Query: 16 RFCKIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEE 75
RF I LG + + +++ K ++V RGK G + K + + + A + +E
Sbjct: 144 RFLYIYLGLNETQ--NSTRKPRKKGGRRVGRGKKGRKGAKIKKEKKETFEAKISRIAYEV 201
Query: 76 VKAQ-IIQKKDEEEVQEWK 93
K IQ ++ +K
Sbjct: 202 KKENSTIQSSSSSNLRNFK 220
>CGD|CAL0001700 [details] [associations]
symbol:orf19.702 species:5476 "Candida albicans" [GO:0003678
"DNA helicase activity" evidence=IEA] [GO:0005844 "polysome"
evidence=IEA] [GO:0006449 "regulation of translational termination"
evidence=IEA] InterPro:IPR003593 InterPro:IPR007087
InterPro:IPR015880 PROSITE:PS00028 PROSITE:PS50157 SMART:SM00355
SMART:SM00382 CGD:CAL0001700 GO:GO:0005524 GO:GO:0008270
GO:GO:0005622 GO:GO:0017111 eggNOG:COG1112 EMBL:AACQ01000183
EMBL:AACQ01000182 RefSeq:XP_711775.1 RefSeq:XP_711793.1
ProteinModelPortal:Q59PZ8 GeneID:3646609 GeneID:3646623
KEGG:cal:CaO19.702 KEGG:cal:CaO19.8321 Uniprot:Q59PZ8
Length = 1105
Score = 224 (83.9 bits), Expect = 2.4e-30, Sum P(3) = 2.4e-30
Identities = 91/299 (30%), Positives = 133/299 (44%)
Query: 380 APSNSALDEIVLRLLNTGIRD-------ENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQ 432
A SN A+D I +L+ +D E R Y + HH + A+ +Q
Sbjct: 691 AASNIAIDNIAEKLMTKHGKDILRITAAEKERDYNRSHPLASICLHHKMYD-AMPMKYQQ 749
Query: 433 KRDDSAADKQKH-GATR-----KDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDV 486
D+ G T ++R + + I+ +A +V +T +G + LN+ V
Sbjct: 750 VMDEMKRGMAPSIGTTAYKKYAQERFFLSNQIVTQAKVVLATPVVAGG--IKSLNN-VRV 806
Query: 487 VIIDEAAQAVEPATLVPLAT-GCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRA 545
VIIDEA Q+ EP TL+PLA +++ LVGD QL + P SLF+R+
Sbjct: 807 VIIDEATQSSEPTTLIPLALPSVEKLVLVGDQKQLSCFSLIP-----NLSLSLFERVLLN 861
Query: 546 G-YPVK-MLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDI 603
G Y ML TQYRMHPE+ FP +FY L+DG D R E P F+D
Sbjct: 862 GTYKTPHMLDTQYRMHPEISEFPRTKFYGGLLKDGIDAN---ARQ-SEGVISSPLYFWDT 917
Query: 604 HEGKESQPA-------GSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQ 655
Q G ++ N DE+ ++ + LI + +K Q+ II+PY Q
Sbjct: 918 KGNAREQSVRNFLREDGGYTYTNRDEIGYIQQVLRTLI-ITKGVKPE-QIGIITPYSGQ 974
Score = 161 (61.7 bits), Expect = 2.4e-30, Sum P(3) = 2.4e-30
Identities = 33/77 (42%), Positives = 48/77 (62%)
Query: 677 ITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLRE- 735
I ++D QGREKD I SCVR++ K IGFL D RR+NV +TRAK +++VG L+
Sbjct: 1021 IASIDAFQGREKDYMIMSCVRSNTKGVIGFLRDERRLNVALTRAKYGLIMVGDKKCLQNG 1080
Query: 736 DKHWNNLVKSAEKQDCL 752
DK W ++ + + +
Sbjct: 1081 DKLWKEYLQYLDSKKAI 1097
Score = 90 (36.7 bits), Expect = 2.4e-30, Sum P(3) = 2.4e-30
Identities = 27/99 (27%), Positives = 48/99 (48%)
Query: 200 SLKICSLST-IAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIKENHN 258
+LKI S ++R A++++ + F ++L K G +N N
Sbjct: 589 NLKILPASQPVSRVLNAMKTINNASFTRMLLGKEPIKQIDFKNFLKFQG-------QNLN 641
Query: 259 ASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAIL 297
SQ + + + +L + ++QGPPGTGKT TI ++ +L
Sbjct: 642 ESQKKGV-QSVLNNSITVLQGPPGTGKTSTIYEIILQLL 679
Score = 39 (18.8 bits), Expect = 5.1e-11, Sum P(3) = 5.1e-11
Identities = 12/46 (26%), Positives = 20/46 (43%)
Query: 463 VIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGC 508
V+ S ++ A HG D++ I A + + PLA+ C
Sbjct: 689 VVAASNIAIDNIAEKLMTKHGKDILRITAAEKERDYNRSHPLASIC 734
>UNIPROTKB|F1PCI1 [details] [associations]
symbol:C4orf21 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR010666 Pfam:PF06839 GO:GO:0008270
GeneTree:ENSGT00550000074391 OMA:HKLGTNK EMBL:AAEX03016829
Ensembl:ENSCAFT00000018553 Uniprot:F1PCI1
Length = 1024
Score = 376 (137.4 bits), Expect = 2.5e-29, Sum P(3) = 2.5e-29
Identities = 113/387 (29%), Positives = 192/387 (49%)
Query: 382 SNSALDEIVLRLLNTG----IRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQKRDDS 437
+N A+D ++L LL+ G +R ++R I+ L A + + L ++D
Sbjct: 618 TNVAVDRVLLGLLSLGFEKFVRVGSVRKIAKPILPYSLHAGSENENEQLKELHGLMKEDL 677
Query: 438 AADKQKHGATRKDRDSI--RSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQA 495
++ + ++ + +L + +V T + ++ L F VV++DE +Q
Sbjct: 678 TPLERVYVRKSIEQHKLGTNKTLLKQVRVVGVTCAACPFPCMNDLK--FPVVVLDECSQI 735
Query: 496 VEPATLVPLAT-GCKQVFLVGDPVQLPATVISPVAEHL-GYGTSLFKRLQRAGYPVKMLK 553
EPA+L+P+A C+++ LVGDP QL T+ A H G +LF RL G+ +L+
Sbjct: 736 TEPASLLPIARFECEKLILVGDPKQLSPTIQGSDAAHENGLEQTLFDRLCLMGHKPVLLR 795
Query: 554 TQYRMHPEVRSFPSREFYDEALEDG-SDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPA 612
TQYR HP + + FY+ L DG S+ E +W CF ++I +G E Q
Sbjct: 796 TQYRCHPAISDISNDLFYEGNLVDGISETERGPLLEWLPTLCF-----YNI-KGPE-QIE 848
Query: 613 GSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKET-FGVES 671
S+ N+ E F L L LI+ + S + +I+ Y+ Q+ + F
Sbjct: 849 RDNSFHNVAEAAFTLKLIQSLIASGI---AGSMIGVITLYKSQMYKLCHLLSAVDFDNPD 905
Query: 672 QKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCAS 731
K V ++TVD QG EK++ I SCVR + +GF+ +RMNV +TR + +L+VG +
Sbjct: 906 IKAVQVSTVDAFQGAEKEIIILSCVRT---RQVGFIDSEKRMNVALTRGRRHLLIVGNLA 962
Query: 732 TLREDKHWNNLVKSAE-KQDCLFRVSK 757
LR+++ W +++ E ++D L S+
Sbjct: 963 CLRKNRLWGRVIQHCEGRRDGLQHASQ 989
Score = 40 (19.1 bits), Expect = 2.5e-29, Sum P(3) = 2.5e-29
Identities = 25/93 (26%), Positives = 38/93 (40%)
Query: 59 KDVDDYLATFEPLLFEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGFHLP-SVTY---- 113
K + YL + LFEE + + + D + Q KL+ + + P S Y
Sbjct: 332 KSIGLYLRSQNIPLFEECQLLVRKGFDFQRKQYGKLKK-FNAVNPEFYSEPKSKLYLKLS 390
Query: 114 EADEVESISPNDLLLLSKEEFKEGSTFPTTYAF 146
+ + S NDL ++SK E TF AF
Sbjct: 391 RRESSSTYSKNDLWVVSKTLDFELDTFIACSAF 423
Score = 37 (18.1 bits), Expect = 2.5e-29, Sum P(3) = 2.5e-29
Identities = 18/58 (31%), Positives = 26/58 (44%)
Query: 263 EAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLREIKRGPELP 320
E + G +R +LI + +LGLLS RV G +R+I + P LP
Sbjct: 600 EVLTVGNVRPWKLLISSSTNVAVDRVLLGLLSLGFEKF-VRV---GSVRKIAK-PILP 652
>DICTYBASE|DDB_G0271732 [details] [associations]
symbol:DDB_G0271732 "AN1-type zinc finger-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0032508 "DNA duplex unwinding"
evidence=ISS] [GO:0003678 "DNA helicase activity" evidence=ISS]
InterPro:IPR000058 InterPro:IPR001374 InterPro:IPR003593
InterPro:IPR004483 Pfam:PF01424 Pfam:PF01428 PROSITE:PS51061
SMART:SM00382 dictyBase:DDB_G0271732 GO:GO:0005524 GO:GO:0003677
GO:GO:0008270 EMBL:AAFI02000006 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 GO:GO:0003678 TIGRFAMs:TIGR00376 Gene3D:4.10.1110.10
OMA:HARQRIS RefSeq:XP_645520.1 ProteinModelPortal:Q75JA0
PRIDE:Q75JA0 EnsemblProtists:DDB0232283 GeneID:8618149
KEGG:ddi:DDB_G0271732 InParanoid:Q75JA0 ProtClustDB:CLSZ2846906
Uniprot:Q75JA0
Length = 1024
Score = 329 (120.9 bits), Expect = 1.0e-28, Sum P(3) = 1.0e-28
Identities = 120/390 (30%), Positives = 195/390 (50%)
Query: 397 GIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQKRDDSAADKQKHGATRKDRDSIRS 456
GI+DE I+S + +++++ HS V I +++ R D +++K S+
Sbjct: 347 GIKDE-IKSLSKQLLKV---KQHSERRV-IQSSIKELRID-LKNREK---------SLIQ 391
Query: 457 AILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGD 516
++N++ ++ ST + + + L +++ FD V+IDE AQA+E + +P+ G K + L GD
Sbjct: 392 QVINDSNVILSTNTGASDSSLKGIDN-FDWVVIDECAQALEASCWIPIQKGNK-LLLAGD 449
Query: 517 PVQLPATVISPVAEHLGYGTSLFKRL-QRAGYPV-KMLKTQYRMHPEVRSFPSREFYDEA 574
QLP T+ S A +G +LF+R+ ++ G V ++L QYRM+ ++ + S EFY+
Sbjct: 450 HQQLPPTIHSMEAAKMGLSITLFERIIKQYGDQVSRLLNVQYRMNHKIMDWSSMEFYNSK 509
Query: 575 LEDGSDVEDY--TTRDWHEYR----CFGPFSFFDIH--EGKESQPAGSGSWINIDEVDFV 626
+ V ++ T D + R P D + +ESQ S N EV V
Sbjct: 510 MIADKSVSNHLLVTGDSPKIRNTLTTTCPLLMIDTSGCDMEESQDDEGESKFNNGEVIVV 569
Query: 627 LLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGR 686
KLI +K + + +I+PY QVK + + + ++I TVDG QGR
Sbjct: 570 KRHIEKLIEC--GVKPND-IGVITPYNGQVKLLKSYLSKKYSS-----MEIGTVDGFQGR 621
Query: 687 EKDVAIFSCVRASDKK--SIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVK 744
EKDV I S VR++ +GFL + RR NV ITRA+ ++VV T+ + +V
Sbjct: 622 EKDVIIISMVRSNTDAPHKVGFLTEDRRTNVAITRARKHVVVVCDTDTISSHEPLKRMVD 681
Query: 745 SAEKQDCLFRVSKPYASFFSDENLESMRKN 774
K + LFR + Y DE L S N
Sbjct: 682 YF-KLNGLFRSALEY---IEDEFLPSDTDN 707
Score = 79 (32.9 bits), Expect = 1.0e-28, Sum P(3) = 1.0e-28
Identities = 18/47 (38%), Positives = 25/47 (53%)
Query: 251 EYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAIL 297
+ I + N SQ EAI L I GPPGTGKT T++ + ++
Sbjct: 229 QLINKGLNQSQKEAILFSLSSNDVACIHGPPGTGKTTTVVEFIVQLI 275
Score = 43 (20.2 bits), Expect = 1.0e-28, Sum P(3) = 1.0e-28
Identities = 10/36 (27%), Positives = 17/36 (47%)
Query: 379 CAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIG 414
C PSN ++D ++ +LL + + RIG
Sbjct: 284 CGPSNLSVDNMLEKLLEYS-NSSSCNGFLINATRIG 318
>UNIPROTKB|E1BMP7 [details] [associations]
symbol:DNA2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:9913 "Bos taurus" [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=ISS]
[GO:0043139 "5'-3' DNA helicase activity" evidence=ISS] [GO:0017108
"5'-flap endonuclease activity" evidence=ISS] [GO:0004518 "nuclease
activity" evidence=ISS] [GO:0003678 "DNA helicase activity"
evidence=ISS] [GO:0003677 "DNA binding" evidence=ISS] [GO:0033567
"DNA replication, Okazaki fragment processing" evidence=ISS]
[GO:0006260 "DNA replication" evidence=ISS] [GO:0000729 "DNA
double-strand break processing" evidence=ISS] [GO:0000076 "DNA
replication checkpoint" evidence=ISS] [GO:0005634 "nucleus"
evidence=IEA] [GO:0045740 "positive regulation of DNA replication"
evidence=IEA] [GO:0043504 "mitochondrial DNA repair" evidence=IEA]
[GO:0043137 "DNA replication, removal of RNA primer" evidence=IEA]
[GO:0042645 "mitochondrial nucleoid" evidence=IEA] [GO:0016890
"site-specific endodeoxyribonuclease activity, specific for altered
base" evidence=IEA] [GO:0006284 "base-excision repair"
evidence=IEA] [GO:0006264 "mitochondrial DNA replication"
evidence=IEA] [GO:0005760 "gamma DNA polymerase complex"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 GO:GO:0005524 GO:GO:0005634
GO:GO:0046872 GO:GO:0006284 GO:GO:0003677 GO:GO:0051539
GO:GO:0042645 GO:GO:0016890 GO:GO:0045740 GO:GO:0000729
GO:GO:0017108 GO:GO:0000076 GO:GO:0043137 EMBL:DAAA02061817
IPI:IPI00688022 NextBio:20878938 GO:GO:0005760 GO:GO:0043139
GO:GO:0043142 GO:GO:0033567 GO:GO:0043504 GO:GO:0006264
PANTHER:PTHR10887:SF14 Uniprot:E1BMP7
Length = 1061
Score = 190 (71.9 bits), Expect = 7.6e-28, Sum P(3) = 7.6e-28
Identities = 48/154 (31%), Positives = 79/154 (51%)
Query: 583 DYTTRDW--HEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQL 640
DY+ W + P F + H+ + G NI E V+ L I +
Sbjct: 875 DYSENPWLIAAFEPNNPVCFLNTHKVPAPEQVEKGGVSNIMEAKLVVFLTSVFIKAGCK- 933
Query: 641 KSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASD 700
S + II+PYR Q+K + ++ S +V++ TVD QGR+K + + S VR+++
Sbjct: 934 --PSDIGIIAPYRQQLKVISDLLAQS----SVGMVEVNTVDRYQGRDKSIVVVSFVRSNE 987
Query: 701 KKSIG-FLADYRRMNVGITRAKSSILVVGCASTL 733
++G L D+RR+NV ITRAK ++++GC +L
Sbjct: 988 DGTLGELLKDWRRLNVAITRAKHKLILLGCVPSL 1021
Score = 176 (67.0 bits), Expect = 7.6e-28, Sum P(3) = 7.6e-28
Identities = 46/123 (37%), Positives = 66/123 (53%)
Query: 458 ILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDP 517
+ N +IV +T + S+ FD I+DEA+Q +P L PL ++ LVGD
Sbjct: 732 LYNSQLIVATTCMGINHPIFSRKT--FDFCIVDEASQISQPVCLGPLFFS-RRFVLVGDH 788
Query: 518 VQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALED 577
QLP V++ A LG SLFKRL++ V L QYRM+ ++ S ++ Y+ LE
Sbjct: 789 QQLPPLVLNREARALGMSESLFKRLEQNKNAVVQLTVQYRMNSKIMSLSNKLTYEGKLEC 848
Query: 578 GSD 580
GSD
Sbjct: 849 GSD 851
Score = 86 (35.3 bits), Expect = 7.6e-28, Sum P(3) = 7.6e-28
Identities = 44/153 (28%), Positives = 69/153 (45%)
Query: 160 RMYLAGE---VIHINKDAVKSQRLLNIHSLITSSVSAV-EKRLFSL----KICSLSTIAR 211
R+ L+GE + +++ VK + + ++S + E LF L K C + T
Sbjct: 517 RIILSGEERTLFALSRGYVKEINSTTVTCSLDRNLSGLPESTLFRLDQEEKNCDIDTPLG 576
Query: 212 EYLAL--RSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIK---ENHNASQLEAIH 266
L + S +DLI+ E S S +P + + + N Q +A+
Sbjct: 577 NLSKLMENTRASQKLRDLIIDFREPQFISYLSS-VLPHEAKDTVACILKGLNKPQRQAMK 635
Query: 267 EGLLRKAFVLIQGPPGTGKTQTILGLLSAILHA 299
+ LL K + LI G PGTGKT TI L+ IL+A
Sbjct: 636 KVLLSKDYTLIVGMPGTGKTTTICTLVR-ILYA 667
Score = 37 (18.1 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 11/61 (18%), Positives = 24/61 (39%)
Query: 422 NSVAIDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLN 481
N VEQ+ +DS+ +++ ++ L + C L+ + +K N
Sbjct: 401 NCALYSRAVEQQMEDSSVPTSMWPKIKEETQHLKPIHLEYFSLWCLMLTLESQSKDNKRN 460
Query: 482 H 482
+
Sbjct: 461 Y 461
>UNIPROTKB|E1BY42 [details] [associations]
symbol:E1BY42 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0032575 "ATP-dependent 5'-3' RNA
helicase activity" evidence=IEA] [GO:0032797 "SMN complex"
evidence=IEA] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0043141 "ATP-dependent 5'-3' DNA helicase activity"
evidence=IEA] [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0000049 "tRNA binding" evidence=IEA]
InterPro:IPR000058 InterPro:IPR001374 InterPro:IPR003593
InterPro:IPR004483 InterPro:IPR026853 Pfam:PF01424 Pfam:PF01428
PROSITE:PS51061 SMART:SM00382 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0008270 GO:GO:0051260
GO:GO:0043022 GO:GO:0000049 InterPro:IPR014001 SMART:SM00487
GO:GO:0043141 GO:GO:0032797 GeneTree:ENSGT00700000104572
TIGRFAMs:TIGR00376 Gene3D:4.10.1110.10 GO:GO:0032575 OMA:HARQRIS
PANTHER:PTHR10887:SF23 EMBL:AADN02040052 EMBL:AADN02040053
IPI:IPI00595444 Ensembl:ENSGALT00000006901 Uniprot:E1BY42
Length = 976
Score = 308 (113.5 bits), Expect = 7.6e-28, Sum P(2) = 7.6e-28
Identities = 94/292 (32%), Positives = 143/292 (48%)
Query: 449 KDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHG-FDVVIIDEAAQAVEPATLVPLATG 507
++ ++ +A+ + +V++ + S L L FD+V+IDE AQA+E + +PL
Sbjct: 329 REETAMTAALTHASVVLATNTGASSDGPLKLLPENYFDLVVIDECAQALEASCWIPLLKA 388
Query: 508 CKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKR-LQRAGYPV-KMLKTQYRMHPEVRSF 565
K + L GD QLP T+IS A G SL +R ++R G V KML QYRMH + +
Sbjct: 389 PKCI-LAGDHKQLPPTIISHKAAAKGLSLSLMERVIERYGEKVVKMLTVQYRMHEAIMQW 447
Query: 566 PSREFYDEALEDGSDVEDYTTRDWHEYRCFG----PFSFFDIHE-GK-ESQPAGSGSWIN 619
S E Y L V + +D C P D G E + S N
Sbjct: 448 ASSEMYGGRLTAHPSVAQHLLKDLPGVTCTEETTIPLLLIDTAGCGLLELEVEDEQSKGN 507
Query: 620 IDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITT 679
EV V L L+ + + +A+++PY QV +E + ++I +
Sbjct: 508 PGEVQLVGLHIQALVDAGVKARD---VAVVAPYNLQVDMLREHLCHRY-----PELEIKS 559
Query: 680 VDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCAS 731
VDG QGREK+ I S VR++ K +GFLA+ RR+NV +TRA+ + ++ C S
Sbjct: 560 VDGFQGREKEAVILSFVRSNRKGEVGFLAEDRRINVAVTRARRHVAII-CDS 610
Score = 90 (36.7 bits), Expect = 7.6e-28, Sum P(2) = 7.6e-28
Identities = 16/36 (44%), Positives = 25/36 (69%)
Query: 258 NASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLL 293
+ASQ EA+ L +K ++ GPPGTGKT T++ ++
Sbjct: 189 DASQREAVSFSLAQKELAIVHGPPGTGKTTTVVEII 224
>UNIPROTKB|K7DXW3 [details] [associations]
symbol:DNA2 "DNA replication nuclease DNA2" species:9913
"Bos taurus" [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0033567 "DNA replication, Okazaki
fragment processing" evidence=IEA] [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 EMBL:DAAA02061817
PANTHER:PTHR10887:SF14 GeneTree:ENSGT00550000074852
Ensembl:ENSBTAT00000003395 Uniprot:K7DXW3
Length = 1137
Score = 190 (71.9 bits), Expect = 9.9e-28, Sum P(3) = 9.9e-28
Identities = 48/154 (31%), Positives = 79/154 (51%)
Query: 583 DYTTRDW--HEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQL 640
DY+ W + P F + H+ + G NI E V+ L I +
Sbjct: 951 DYSENPWLIAAFEPNNPVCFLNTHKVPAPEQVEKGGVSNIMEAKLVVFLTSVFIKAGCK- 1009
Query: 641 KSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASD 700
S + II+PYR Q+K + ++ S +V++ TVD QGR+K + + S VR+++
Sbjct: 1010 --PSDIGIIAPYRQQLKVISDLLAQS----SVGMVEVNTVDRYQGRDKSIVVVSFVRSNE 1063
Query: 701 KKSIG-FLADYRRMNVGITRAKSSILVVGCASTL 733
++G L D+RR+NV ITRAK ++++GC +L
Sbjct: 1064 DGTLGELLKDWRRLNVAITRAKHKLILLGCVPSL 1097
Score = 176 (67.0 bits), Expect = 9.9e-28, Sum P(3) = 9.9e-28
Identities = 46/123 (37%), Positives = 66/123 (53%)
Query: 458 ILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDP 517
+ N +IV +T + S+ FD I+DEA+Q +P L PL ++ LVGD
Sbjct: 808 LYNSQLIVATTCMGINHPIFSRKT--FDFCIVDEASQISQPVCLGPLFFS-RRFVLVGDH 864
Query: 518 VQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALED 577
QLP V++ A LG SLFKRL++ V L QYRM+ ++ S ++ Y+ LE
Sbjct: 865 QQLPPLVLNREARALGMSESLFKRLEQNKNAVVQLTVQYRMNSKIMSLSNKLTYEGKLEC 924
Query: 578 GSD 580
GSD
Sbjct: 925 GSD 927
Score = 86 (35.3 bits), Expect = 9.9e-28, Sum P(3) = 9.9e-28
Identities = 44/153 (28%), Positives = 69/153 (45%)
Query: 160 RMYLAGE---VIHINKDAVKSQRLLNIHSLITSSVSAV-EKRLFSL----KICSLSTIAR 211
R+ L+GE + +++ VK + + ++S + E LF L K C + T
Sbjct: 593 RIILSGEERTLFALSRGYVKEINSTTVTCSLDRNLSGLPESTLFRLDQEEKNCDIDTPLG 652
Query: 212 EYLAL--RSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIK---ENHNASQLEAIH 266
L + S +DLI+ E S S +P + + + N Q +A+
Sbjct: 653 NLSKLMENTRASQKLRDLIIDFREPQFISYLSS-VLPHEAKDTVACILKGLNKPQRQAMK 711
Query: 267 EGLLRKAFVLIQGPPGTGKTQTILGLLSAILHA 299
+ LL K + LI G PGTGKT TI L+ IL+A
Sbjct: 712 KVLLSKDYTLIVGMPGTGKTTTICTLVR-ILYA 743
Score = 37 (18.1 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 11/61 (18%), Positives = 24/61 (39%)
Query: 422 NSVAIDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLN 481
N VEQ+ +DS+ +++ ++ L + C L+ + +K N
Sbjct: 477 NCALYSRAVEQQMEDSSVPTSMWPKIKEETQHLKPIHLEYFSLWCLMLTLESQSKDNKRN 536
Query: 482 H 482
+
Sbjct: 537 Y 537
>UNIPROTKB|J9NRI6 [details] [associations]
symbol:DNA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0033567 "DNA replication, Okazaki
fragment processing" evidence=IEA] [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA] InterPro:IPR026851
InterPro:IPR014001 PROSITE:PS51192 GO:GO:0017108 GO:GO:0043142
GO:GO:0033567 PANTHER:PTHR10887:SF14 GeneTree:ENSGT00550000074852
EMBL:AAEX03002775 EMBL:AAEX03002776 EMBL:AAEX03002777
Ensembl:ENSCAFT00000046272 Uniprot:J9NRI6
Length = 640
Score = 175 (66.7 bits), Expect = 1.2e-27, Sum P(3) = 1.2e-27
Identities = 47/154 (30%), Positives = 76/154 (49%)
Query: 583 DYTTRDWH--EYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQL 640
DY+ W + P F + + + G NI E ++ L I +
Sbjct: 454 DYSENPWMIGAFEPNNPVCFLNTDKVPAPEQVEKGGVSNITEAKLIVFLTSVFIKAGCK- 512
Query: 641 KSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASD 700
S + II+PYR Q+K + + S ++V++ TVD QGR+K + + S VR++
Sbjct: 513 --PSDIGIIAPYRQQLKIINDLLFHS----SIRMVEVNTVDKYQGRDKSIILVSFVRSNK 566
Query: 701 KKSIG-FLADYRRMNVGITRAKSSILVVGCASTL 733
IG L D+RR+NV ITRAK ++++GC +L
Sbjct: 567 DGPIGELLKDWRRLNVAITRAKHKLILLGCVPSL 600
Score = 173 (66.0 bits), Expect = 1.2e-27, Sum P(3) = 1.2e-27
Identities = 48/123 (39%), Positives = 65/123 (52%)
Query: 458 ILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDP 517
+ N IV +T + S+ FD I+DEA+Q +P L PL + V LVGD
Sbjct: 311 LYNSHRIVATTCMGINHPIFSRKT--FDFCIVDEASQISQPICLGPLFFSQRFV-LVGDH 367
Query: 518 VQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALED 577
QLP V++ A LG SLFKRL++ V L QYRM+ ++ S ++ YD LE
Sbjct: 368 QQLPPLVLNREARALGMSESLFKRLEQNKNAVVQLTVQYRMNSKIMSLSNKLTYDGKLEC 427
Query: 578 GSD 580
GSD
Sbjct: 428 GSD 430
Score = 94 (38.1 bits), Expect = 1.2e-27, Sum P(3) = 1.2e-27
Identities = 43/147 (29%), Positives = 68/147 (46%)
Query: 160 RMYLAGE---VIHINKDAVKSQRLLNIHSLITSSVSAV-EKRLFSL----KICSLSTIAR 211
R+ L+GE + +++ VK + ++ L+ +VS + E LF L K C + T
Sbjct: 96 RIILSGEERTLFALSRGYVKEINVTSVTCLLDRNVSVLPESTLFRLDQEEKTCDIDTPLG 155
Query: 212 EYLAL--RSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIK---ENHNASQLEAIH 266
L + S +DLI+ E S S +P + + + N Q +A+
Sbjct: 156 NLSKLMENTCVSQKLRDLIIDFREPQFISYLSS-VLPYDAKDTVACILKGLNKPQRQAMK 214
Query: 267 EGLLRKAFVLIQGPPGTGKTQTILGLL 293
+ LL K + LI G PGTGKT TI L+
Sbjct: 215 KVLLSKDYTLIVGMPGTGKTTTICTLV 241
>UNIPROTKB|P51530 [details] [associations]
symbol:DNA2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:9606 "Homo sapiens" [GO:0005524
"ATP binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0042645
"mitochondrial nucleoid" evidence=IDA] [GO:0043504 "mitochondrial
DNA repair" evidence=IDA] [GO:0006264 "mitochondrial DNA
replication" evidence=IDA] [GO:0017108 "5'-flap endonuclease
activity" evidence=IDA] [GO:0045740 "positive regulation of DNA
replication" evidence=IDA] [GO:0043137 "DNA replication, removal of
RNA primer" evidence=IDA] [GO:0006284 "base-excision repair"
evidence=IDA] [GO:0016890 "site-specific endodeoxyribonuclease
activity, specific for altered base" evidence=IDA] [GO:0005760
"gamma DNA polymerase complex" evidence=IDA] [GO:0016887 "ATPase
activity" evidence=TAS] [GO:0004386 "helicase activity"
evidence=TAS] [GO:0000076 "DNA replication checkpoint"
evidence=IMP] [GO:0006260 "DNA replication" evidence=IMP]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0033567 "DNA
replication, Okazaki fragment processing" evidence=IDA] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=IDA]
[GO:0003678 "DNA helicase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0000729 "DNA double-strand
break processing" evidence=IDA] [GO:0004518 "nuclease activity"
evidence=IDA] [GO:0043139 "5'-3' DNA helicase activity"
evidence=IDA] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0000722 "telomere maintenance via recombination" evidence=TAS]
[GO:0000723 "telomere maintenance" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0006271 "DNA strand elongation
involved in DNA replication" evidence=TAS] [GO:0032201 "telomere
maintenance via semi-conservative replication" evidence=TAS]
[GO:0006200 "ATP catabolic process" evidence=TAS] [GO:0032508 "DNA
duplex unwinding" evidence=IDA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 GO:GO:0005524 Reactome:REACT_115566
GO:GO:0005654 GO:GO:0046872 GO:GO:0006284 GO:GO:0003677
GO:GO:0051539 GO:GO:0042645 GO:GO:0000084 GO:GO:0016890
eggNOG:COG1112 GO:GO:0045740 GO:GO:0000722 GO:GO:0000729
GO:GO:0017108 Reactome:REACT_383 GO:GO:0000076 GO:GO:0043137
GO:GO:0043139 GO:GO:0043142 GO:GO:0043504 GO:GO:0006264
PANTHER:PTHR10887:SF14 CTD:1763 HOGENOM:HOG000168456
HOVERGEN:HBG081456 KO:K10742 EMBL:D42046 EMBL:AL136233
EMBL:BC041115 EMBL:BC053574 EMBL:BC063664 EMBL:BC111740
EMBL:BC028188 IPI:IPI00216142 IPI:IPI00816670 IPI:IPI00816801
PIR:T50697 RefSeq:NP_001073918.2 UniGene:Hs.532446
ProteinModelPortal:P51530 SMR:P51530 STRING:P51530
PhosphoSite:P51530 DMDM:119370373 PaxDb:P51530 PRIDE:P51530
Ensembl:ENST00000358410 Ensembl:ENST00000399179
Ensembl:ENST00000549829 GeneID:1763 KEGG:hsa:1763 UCSC:uc021prt.1
GeneCards:GC10M070173 HGNC:HGNC:2939 HPA:HPA037487 MIM:601810
neXtProt:NX_P51530 InParanoid:P51530 GenomeRNAi:1763 NextBio:7187
ArrayExpress:P51530 Bgee:P51530 CleanEx:HS_DNA2
Genevestigator:P51530 GermOnline:ENSG00000138346 GO:GO:0032201
Uniprot:P51530
Length = 1060
Score = 305 (112.4 bits), Expect = 1.7e-27, Sum P(2) = 1.7e-27
Identities = 95/301 (31%), Positives = 149/301 (49%)
Query: 458 ILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDP 517
+ N +IV +T + S+ FD I+DEA+Q +P L PL ++ LVGD
Sbjct: 732 LYNSQLIVATTCMGINHPIFSRKI--FDFCIVDEASQISQPICLGPLFFS-RRFVLVGDH 788
Query: 518 VQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALED 577
QLP V++ A LG SLFKRL++ V L QYRM+ ++ S ++ Y+ LE
Sbjct: 789 QQLPPLVLNREARALGMSESLFKRLEQNKSAVVQLTVQYRMNSKIMSLSNKLTYEGKLEC 848
Query: 578 GSD------------------VE---DYTTRDW--HEYRCFGPFSFFDIHEGKESQPAGS 614
GSD +E DY+ W + P F + + +
Sbjct: 849 GSDKVANAVINLRHFKDVKLELEFYADYSDNPWLMGVFEPNNPVCFLNTDKVPAPEQVEK 908
Query: 615 GSWINIDEVDFVLLLFHKLISMYPQLKSS-SQLAIISPYRHQVKQFQERFKETFGVESQK 673
G N+ E L++F L S++ + S S + II+PYR Q+K + + G+
Sbjct: 909 GGVSNVTEAK--LIVF--LTSIFVKAGCSPSDIGIIAPYRQQLKIINDLLARSIGM---- 960
Query: 674 VVDITTVDGCQGREKDVAIFSCVRASDKKSIG-FLADYRRMNVGITRAKSSILVVGCAST 732
V++ TVD QGR+K + + S VR++ ++G L D+RR+NV ITRAK ++++GC +
Sbjct: 961 -VEVNTVDKYQGRDKSIVLVSFVRSNKDGTVGELLKDWRRLNVAITRAKHKLILLGCVPS 1019
Query: 733 L 733
L
Sbjct: 1020 L 1020
Score = 91 (37.1 bits), Expect = 1.7e-27, Sum P(2) = 1.7e-27
Identities = 44/153 (28%), Positives = 71/153 (46%)
Query: 160 RMYLAGE---VIHINKDAVKSQRLLNIHSLITSSVSAV-EKRLFSL----KICSLSTIAR 211
R+ ++GE + +++ VK + + L+ ++S + E LF L K C + T
Sbjct: 517 RVIVSGEERSLFALSRGYVKEINMTTVTCLLDRNLSVLPESTLFRLDQEEKNCDIDTPLG 576
Query: 212 EYLAL--RSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIK---ENHNASQLEAIH 266
L + S +DLI+ E S S +P + + + N Q +A+
Sbjct: 577 NLSKLMENTFVSKKLRDLIIDFREPQFISYLSS-VLPHDAKDTVACILKGLNKPQRQAMK 635
Query: 267 EGLLRKAFVLIQGPPGTGKTQTILGLLSAILHA 299
+ LL K + LI G PGTGKT TI L+ IL+A
Sbjct: 636 KVLLSKDYTLIVGMPGTGKTTTICTLVR-ILYA 667
>UNIPROTKB|J3KPX5 [details] [associations]
symbol:DNA2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:9606 "Homo sapiens" [GO:0017108
"5'-flap endonuclease activity" evidence=IEA] [GO:0033567 "DNA
replication, Okazaki fragment processing" evidence=IEA] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=IEA]
InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696 GO:GO:0017108
GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14 EMBL:AL136233
HGNC:HGNC:2939 OMA:EHESLCH ProteinModelPortal:J3KPX5
Ensembl:ENST00000399180 Uniprot:J3KPX5
Length = 1146
Score = 305 (112.4 bits), Expect = 2.2e-27, Sum P(2) = 2.2e-27
Identities = 95/301 (31%), Positives = 149/301 (49%)
Query: 458 ILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDP 517
+ N +IV +T + S+ FD I+DEA+Q +P L PL ++ LVGD
Sbjct: 818 LYNSQLIVATTCMGINHPIFSRKI--FDFCIVDEASQISQPICLGPLFFS-RRFVLVGDH 874
Query: 518 VQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALED 577
QLP V++ A LG SLFKRL++ V L QYRM+ ++ S ++ Y+ LE
Sbjct: 875 QQLPPLVLNREARALGMSESLFKRLEQNKSAVVQLTVQYRMNSKIMSLSNKLTYEGKLEC 934
Query: 578 GSD------------------VE---DYTTRDW--HEYRCFGPFSFFDIHEGKESQPAGS 614
GSD +E DY+ W + P F + + +
Sbjct: 935 GSDKVANAVINLRHFKDVKLELEFYADYSDNPWLMGVFEPNNPVCFLNTDKVPAPEQVEK 994
Query: 615 GSWINIDEVDFVLLLFHKLISMYPQLKSS-SQLAIISPYRHQVKQFQERFKETFGVESQK 673
G N+ E L++F L S++ + S S + II+PYR Q+K + + G+
Sbjct: 995 GGVSNVTEAK--LIVF--LTSIFVKAGCSPSDIGIIAPYRQQLKIINDLLARSIGM---- 1046
Query: 674 VVDITTVDGCQGREKDVAIFSCVRASDKKSIG-FLADYRRMNVGITRAKSSILVVGCAST 732
V++ TVD QGR+K + + S VR++ ++G L D+RR+NV ITRAK ++++GC +
Sbjct: 1047 -VEVNTVDKYQGRDKSIVLVSFVRSNKDGTVGELLKDWRRLNVAITRAKHKLILLGCVPS 1105
Query: 733 L 733
L
Sbjct: 1106 L 1106
Score = 91 (37.1 bits), Expect = 2.2e-27, Sum P(2) = 2.2e-27
Identities = 44/153 (28%), Positives = 71/153 (46%)
Query: 160 RMYLAGE---VIHINKDAVKSQRLLNIHSLITSSVSAV-EKRLFSL----KICSLSTIAR 211
R+ ++GE + +++ VK + + L+ ++S + E LF L K C + T
Sbjct: 603 RVIVSGEERSLFALSRGYVKEINMTTVTCLLDRNLSVLPESTLFRLDQEEKNCDIDTPLG 662
Query: 212 EYLAL--RSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIK---ENHNASQLEAIH 266
L + S +DLI+ E S S +P + + + N Q +A+
Sbjct: 663 NLSKLMENTFVSKKLRDLIIDFREPQFISYLSS-VLPHDAKDTVACILKGLNKPQRQAMK 721
Query: 267 EGLLRKAFVLIQGPPGTGKTQTILGLLSAILHA 299
+ LL K + LI G PGTGKT TI L+ IL+A
Sbjct: 722 KVLLSKDYTLIVGMPGTGKTTTICTLVR-ILYA 753
>UNIPROTKB|Q5ZKG3 [details] [associations]
symbol:DNA2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:9031 "Gallus gallus" [GO:0005524
"ATP binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0032508 "DNA
duplex unwinding" evidence=ISS] [GO:0000076 "DNA replication
checkpoint" evidence=ISS] [GO:0000729 "DNA double-strand break
processing" evidence=ISS] [GO:0006260 "DNA replication"
evidence=ISS] [GO:0033567 "DNA replication, Okazaki fragment
processing" evidence=ISS] [GO:0003677 "DNA binding" evidence=ISS]
[GO:0003678 "DNA helicase activity" evidence=ISS] [GO:0004518
"nuclease activity" evidence=ISS] [GO:0043139 "5'-3' DNA helicase
activity" evidence=ISS] [GO:0043142 "single-stranded DNA-dependent
ATPase activity" evidence=ISS] [GO:0017108 "5'-flap endonuclease
activity" evidence=ISS] [GO:0045740 "positive regulation of DNA
replication" evidence=ISS] [GO:0006264 "mitochondrial DNA
replication" evidence=ISS] [GO:0043137 "DNA replication, removal of
RNA primer" evidence=ISS] [GO:0006284 "base-excision repair"
evidence=ISS] [GO:0016890 "site-specific endodeoxyribonuclease
activity, specific for altered base" evidence=ISS] [GO:0005760
"gamma DNA polymerase complex" evidence=ISS] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0046872 GO:GO:0006284 GO:GO:0003677
GO:GO:0051539 GO:GO:0016890 eggNOG:COG1112 GO:GO:0045740
GO:GO:0000729 GO:GO:0017108 GO:GO:0000076 GO:GO:0043137
GO:GO:0043139 GO:GO:0043142 GO:GO:0006264 PANTHER:PTHR10887:SF14
EMBL:AJ720121 EMBL:AADN02028013 IPI:IPI00596013
RefSeq:NP_001006497.1 UniGene:Gga.42409 STRING:Q5ZKG3 GeneID:423688
KEGG:gga:423688 CTD:1763 HOGENOM:HOG000168456 HOVERGEN:HBG081456
KO:K10742 NextBio:20826122 Uniprot:Q5ZKG3
Length = 992
Score = 186 (70.5 bits), Expect = 2.6e-27, Sum P(3) = 2.6e-27
Identities = 41/113 (36%), Positives = 65/113 (57%)
Query: 644 SQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKS 703
S + IISPYRHQ+K + + V++ T+D QGR+K + I S VR S+ ++
Sbjct: 870 SDIGIISPYRHQLKVITDLMARL----KENRVEVNTIDKYQGRDKSIIIVSFVRNSNDEN 925
Query: 704 IG-FLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRV 755
+G L D+RR+NV ITRAK +++VGC +LR L+ + + +F +
Sbjct: 926 LGALLKDWRRLNVAITRAKHKLIMVGCVPSLRRYPPLEKLLCHLQSEAMIFNL 978
Score = 181 (68.8 bits), Expect = 2.6e-27, Sum P(3) = 2.6e-27
Identities = 64/187 (34%), Positives = 87/187 (46%)
Query: 484 FDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQ 543
FD I+DEA+Q +P L PL K+ LVGD QLP V + A LG SLFKRL+
Sbjct: 725 FDFCIVDEASQISQPICLGPLFCS-KRFVLVGDHQQLPPLVQNSEARDLGMSESLFKRLE 783
Query: 544 RAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDI 603
+ V L QYRM+ ++ S ++ Y+ LE GS+ T + + F D
Sbjct: 784 QNQNAVVQLTVQYRMNSKIMSLSNKLVYEGKLECGSEKVSNATANLPNLKML-KLEFAD- 841
Query: 604 HEGKESQPAGSGSWIN-IDEVDF-VLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQE 661
S +W+ + E D V L + P S + IISPYRHQ+K +
Sbjct: 842 ---------ASKTWLKEVLEPDKPVCFLNTEKAGCRP-----SDIGIISPYRHQLKVITD 887
Query: 662 ---RFKE 665
R KE
Sbjct: 888 LMARLKE 894
Score = 79 (32.9 bits), Expect = 2.6e-27, Sum P(3) = 2.6e-27
Identities = 20/42 (47%), Positives = 26/42 (61%)
Query: 258 NASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHA 299
N Q +A+ + LL + + LI G PGTGKT TI L+ IL A
Sbjct: 596 NKPQKQAMKQVLLSRDYTLIVGMPGTGKTTTICALVR-ILSA 636
Score = 50 (22.7 bits), Expect = 7.3e-14, Sum P(3) = 7.3e-14
Identities = 15/69 (21%), Positives = 35/69 (50%)
Query: 531 HLGYGTSLFKRLQ-RAGYPVKMLKTQYRMHPEVRSFPSREFY-DEALEDGSDVED-YTTR 587
H L K + + G+ +++ + Q ++HP++R F E ++++ +D+E+ Y ++
Sbjct: 648 HTAVDNILLKLAKFKVGF-LRLGRAQ-KVHPDIRKFTEEEICRSKSIKSVTDLEELYNSQ 705
Query: 588 DWHEYRCFG 596
C G
Sbjct: 706 PVVATACMG 714
>MGI|MGI:99954 [details] [associations]
symbol:Ighmbp2 "immunoglobulin mu binding protein 2"
species:10090 "Mus musculus" [GO:0000049 "tRNA binding"
evidence=ISO] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0001078 "RNA polymerase II
core promoter proximal region sequence-specific DNA binding
transcription factor activity involved in negative regulation of
transcription" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003723
"RNA binding" evidence=ISO] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006412 "translation"
evidence=NAS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0008186 "RNA-dependent ATPase activity"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0021522
"spinal cord motor neuron differentiation" evidence=IMP]
[GO:0030424 "axon" evidence=IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030529 "ribonucleoprotein complex" evidence=IDA]
[GO:0032575 "ATP-dependent 5'-3' RNA helicase activity"
evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
[GO:0043022 "ribosome binding" evidence=ISO;IDA] [GO:0043025
"neuronal cell body" evidence=IDA] [GO:0043141 "ATP-dependent 5'-3'
DNA helicase activity" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IDA] [GO:0051260 "protein homooligomerization"
evidence=ISO] InterPro:IPR000058 InterPro:IPR001374
InterPro:IPR003593 InterPro:IPR004483 InterPro:IPR026853
Pfam:PF01424 PROSITE:PS51039 PROSITE:PS51061 SMART:SM00154
SMART:SM00382 SMART:SM00393 MGI:MGI:99954 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0006412 GO:GO:0030424 GO:GO:0043025
GO:GO:0008270 GO:GO:0051260 GO:GO:0006351 GO:GO:0043621
GO:GO:0043022 GO:GO:0030426 GO:GO:0021522 GO:GO:0030529
GO:GO:0000049 eggNOG:COG1112 InterPro:IPR014001 SMART:SM00487
GO:GO:0043141 HOGENOM:HOG000185831 TIGRFAMs:TIGR00376
Gene3D:4.10.1110.10 GO:GO:0032575 HOVERGEN:HBG077019
OrthoDB:EOG4GHZNJ PANTHER:PTHR10887:SF23 EMBL:L10075
IPI:IPI00113033 PIR:S35633 UniGene:Mm.3179
ProteinModelPortal:P40694 SMR:P40694 IntAct:P40694 STRING:P40694
PhosphoSite:P40694 PaxDb:P40694 PRIDE:P40694 UCSC:uc008fwa.1
InParanoid:P40694 CleanEx:MM_IGHMBP2 Genevestigator:P40694
GermOnline:ENSMUSG00000024831 Uniprot:P40694
Length = 993
Score = 281 (104.0 bits), Expect = 7.2e-27, Sum P(3) = 7.2e-27
Identities = 95/307 (30%), Positives = 141/307 (45%)
Query: 448 RKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATG 507
R++ ++S + V+ +T + S L FDVV++DE AQA+E + +PL
Sbjct: 332 REEAAIVQSLTAADVVLATNTGASSDGPLKLLPEDYFDVVVVDECAQALEASCWIPLLKA 391
Query: 508 CKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQR---AGYPVKMLKTQYRMHPEVRS 564
K + L GD QLP T +S A G SL +RL AG V+ML QYRMH +
Sbjct: 392 PKCI-LAGDHRQLPPTTVSHRAALAGLSRSLMERLAEKHGAGV-VRMLTVQYRMHQAIMC 449
Query: 565 FPSREFYDEALEDGSDVEDYTTRDW------HEYRCFGPFSFFDIHE-GK-ESQPAGSGS 616
+ S Y V + +D E R P D G E + S S
Sbjct: 450 WASEAMYHGQFTSHPSVAGHLLKDLPGVTDTEETRV--PLLLIDTAGCGLLELEEEDSQS 507
Query: 617 WINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVD 676
N EV V L L+ Q + +A+I+PY QV ++ ++
Sbjct: 508 KGNPGEVRLVTLHIQALVDAGVQ---AGDIAVIAPYNLQVDLLRQSLSN-----KHPELE 559
Query: 677 ITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLRED 736
I +VDG QGREK+ + + VR++ K +GFLA+ RR+NV +TRA+ + V+ + T+
Sbjct: 560 IKSVDGFQGREKEAVLLTFVRSNRKGEVGFLAEDRRINVAVTRARRHVAVICDSHTVNNH 619
Query: 737 KHWNNLV 743
LV
Sbjct: 620 AFLETLV 626
Score = 90 (36.7 bits), Expect = 7.2e-27, Sum P(3) = 7.2e-27
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 236 SGSQDQSWKIPGLLHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLL 293
S + + +IP L + + SQ EA+ L +K +I GPPGTGKT T++ ++
Sbjct: 172 SSTPSPAMEIPPL--SFYNTTLDLSQKEAVSFALAQKELAIIHGPPGTGKTTTVVEII 227
Score = 65 (27.9 bits), Expect = 7.2e-27, Sum P(3) = 7.2e-27
Identities = 25/86 (29%), Positives = 44/86 (51%)
Query: 379 CAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAI--DH---LVEQK 433
CAPSN A+D +V RL + +R P + ++ HHS+++V D+ + + +
Sbjct: 240 CAPSNIAVDNLVERLALC--KKRILRLGHPARLLESVQ-HHSLDAVLARSDNAQIVADIR 296
Query: 434 RD-DSAADKQKHGATRKDRDSIRSAI 458
RD D K K ++++ + RS I
Sbjct: 297 RDIDQVFGKNKKTQDKREKGNFRSEI 322
>UNIPROTKB|F6UZP1 [details] [associations]
symbol:DNA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0033567 "DNA replication, Okazaki
fragment processing" evidence=IEA] [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 InterPro:IPR014001 PROSITE:PS51192
GO:GO:0017108 GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14
GeneTree:ENSGT00550000074852 OMA:EHESLCH Ensembl:ENSCAFT00000021752
EMBL:AAEX03002775 EMBL:AAEX03002776 EMBL:AAEX03002777
Uniprot:F6UZP1
Length = 1021
Score = 175 (66.7 bits), Expect = 8.5e-27, Sum P(3) = 8.5e-27
Identities = 47/154 (30%), Positives = 76/154 (49%)
Query: 583 DYTTRDWH--EYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQL 640
DY+ W + P F + + + G NI E ++ L I +
Sbjct: 843 DYSENPWMIGAFEPNNPVCFLNTDKVPAPEQVEKGGVSNITEAKLIVFLTSVFIKAGCK- 901
Query: 641 KSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASD 700
S + II+PYR Q+K + + S ++V++ TVD QGR+K + + S VR++
Sbjct: 902 --PSDIGIIAPYRQQLKIINDLLFHS----SIRMVEVNTVDKYQGRDKSIILVSFVRSNK 955
Query: 701 KKSIG-FLADYRRMNVGITRAKSSILVVGCASTL 733
IG L D+RR+NV ITRAK ++++GC +L
Sbjct: 956 DGPIGELLKDWRRLNVAITRAKHKLILLGCVPSL 989
Score = 173 (66.0 bits), Expect = 8.5e-27, Sum P(3) = 8.5e-27
Identities = 48/123 (39%), Positives = 65/123 (52%)
Query: 458 ILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDP 517
+ N IV +T + S+ FD I+DEA+Q +P L PL + V LVGD
Sbjct: 700 LYNSHRIVATTCMGINHPIFSRKT--FDFCIVDEASQISQPICLGPLFFSQRFV-LVGDH 756
Query: 518 VQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALED 577
QLP V++ A LG SLFKRL++ V L QYRM+ ++ S ++ YD LE
Sbjct: 757 QQLPPLVLNREARALGMSESLFKRLEQNKNAVVQLTVQYRMNSKIMSLSNKLTYDGKLEC 816
Query: 578 GSD 580
GSD
Sbjct: 817 GSD 819
Score = 94 (38.1 bits), Expect = 8.5e-27, Sum P(3) = 8.5e-27
Identities = 43/147 (29%), Positives = 68/147 (46%)
Query: 160 RMYLAGE---VIHINKDAVKSQRLLNIHSLITSSVSAV-EKRLFSL----KICSLSTIAR 211
R+ L+GE + +++ VK + ++ L+ +VS + E LF L K C + T
Sbjct: 485 RIILSGEERTLFALSRGYVKEINVTSVTCLLDRNVSVLPESTLFRLDQEEKTCDIDTPLG 544
Query: 212 EYLAL--RSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIK---ENHNASQLEAIH 266
L + S +DLI+ E S S +P + + + N Q +A+
Sbjct: 545 NLSKLMENTCVSQKLRDLIIDFREPQFISYLSS-VLPYDAKDTVACILKGLNKPQRQAMK 603
Query: 267 EGLLRKAFVLIQGPPGTGKTQTILGLL 293
+ LL K + LI G PGTGKT TI L+
Sbjct: 604 KVLLSKDYTLIVGMPGTGKTTTICTLV 630
Score = 40 (19.1 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 12/53 (22%), Positives = 23/53 (43%)
Query: 430 VEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNH 482
VEQ+ DDS+ +++ ++ L + C L+ + +K NH
Sbjct: 377 VEQQTDDSSVPIGMLPKIKEETQHLKLTHLEYFSLWCLMLTLESQSKDNKKNH 429
>UNIPROTKB|E2QSH2 [details] [associations]
symbol:E2QSH2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0033567 "DNA replication, Okazaki
fragment processing" evidence=IEA] [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 InterPro:IPR014001 PROSITE:PS51192
GO:GO:0017108 GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14
Ensembl:ENSCAFT00000021752 Uniprot:E2QSH2
Length = 1040
Score = 175 (66.7 bits), Expect = 9.1e-27, Sum P(3) = 9.1e-27
Identities = 47/154 (30%), Positives = 76/154 (49%)
Query: 583 DYTTRDWH--EYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQL 640
DY+ W + P F + + + G NI E ++ L I +
Sbjct: 874 DYSENPWMIGAFEPNNPVCFLNTDKVPAPEQVEKGGVSNITEAKLIVFLTSVFIKAGCK- 932
Query: 641 KSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASD 700
S + II+PYR Q+K + + S ++V++ TVD QGR+K + + S VR++
Sbjct: 933 --PSDIGIIAPYRQQLKIINDLLFHS----SIRMVEVNTVDKYQGRDKSIILVSFVRSNK 986
Query: 701 KKSIG-FLADYRRMNVGITRAKSSILVVGCASTL 733
IG L D+RR+NV ITRAK ++++GC +L
Sbjct: 987 DGPIGELLKDWRRLNVAITRAKHKLILLGCVPSL 1020
Score = 173 (66.0 bits), Expect = 9.1e-27, Sum P(3) = 9.1e-27
Identities = 48/123 (39%), Positives = 65/123 (52%)
Query: 458 ILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDP 517
+ N IV +T + S+ FD I+DEA+Q +P L PL + V LVGD
Sbjct: 731 LYNSHRIVATTCMGINHPIFSRKT--FDFCIVDEASQISQPICLGPLFFSQRFV-LVGDH 787
Query: 518 VQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALED 577
QLP V++ A LG SLFKRL++ V L QYRM+ ++ S ++ YD LE
Sbjct: 788 QQLPPLVLNREARALGMSESLFKRLEQNKNAVVQLTVQYRMNSKIMSLSNKLTYDGKLEC 847
Query: 578 GSD 580
GSD
Sbjct: 848 GSD 850
Score = 94 (38.1 bits), Expect = 9.1e-27, Sum P(3) = 9.1e-27
Identities = 43/147 (29%), Positives = 68/147 (46%)
Query: 160 RMYLAGE---VIHINKDAVKSQRLLNIHSLITSSVSAV-EKRLFSL----KICSLSTIAR 211
R+ L+GE + +++ VK + ++ L+ +VS + E LF L K C + T
Sbjct: 516 RIILSGEERTLFALSRGYVKEINVTSVTCLLDRNVSVLPESTLFRLDQEEKTCDIDTPLG 575
Query: 212 EYLAL--RSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIK---ENHNASQLEAIH 266
L + S +DLI+ E S S +P + + + N Q +A+
Sbjct: 576 NLSKLMENTCVSQKLRDLIIDFREPQFISYLSS-VLPYDAKDTVACILKGLNKPQRQAMK 634
Query: 267 EGLLRKAFVLIQGPPGTGKTQTILGLL 293
+ LL K + LI G PGTGKT TI L+
Sbjct: 635 KVLLSKDYTLIVGMPGTGKTTTICTLV 661
Score = 40 (19.1 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 12/53 (22%), Positives = 23/53 (43%)
Query: 430 VEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNH 482
VEQ+ DDS+ +++ ++ L + C L+ + +K NH
Sbjct: 408 VEQQTDDSSVPIGMLPKIKEETQHLKLTHLEYFSLWCLMLTLESQSKDNKKNH 460
>UNIPROTKB|F1RY71 [details] [associations]
symbol:IGHMBP2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051260 "protein homooligomerization" evidence=IEA]
[GO:0043141 "ATP-dependent 5'-3' DNA helicase activity"
evidence=IEA] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0032797 "SMN complex" evidence=IEA] [GO:0032575 "ATP-dependent
5'-3' RNA helicase activity" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000049 "tRNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000058
InterPro:IPR001374 InterPro:IPR003593 InterPro:IPR004483
InterPro:IPR026853 Pfam:PF01424 Pfam:PF01428 PROSITE:PS51039
PROSITE:PS51061 SMART:SM00382 SMART:SM00393 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0051260 GO:GO:0043022 GO:GO:0000049
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043141
GO:GO:0032797 GeneTree:ENSGT00700000104572 TIGRFAMs:TIGR00376
Gene3D:4.10.1110.10 GO:GO:0032575 CTD:3508 OMA:HARQRIS
PANTHER:PTHR10887:SF23 EMBL:CU694814 RefSeq:XP_003122472.2
Ensembl:ENSSSCT00000014076 GeneID:100520173 KEGG:ssc:100520173
Uniprot:F1RY71
Length = 987
Score = 296 (109.3 bits), Expect = 2.7e-26, Sum P(2) = 2.7e-26
Identities = 99/298 (33%), Positives = 143/298 (47%)
Query: 449 KDRD--SIRSAILNEAVIVCSTLSFSGSALLSKLNHG-FDVVIIDEAAQAVEPATLVPLA 505
K+R+ ++ ++ V++ + S L L G FDVV+IDE AQA+E + VPL
Sbjct: 328 KEREEAAMLESLTAARVVLATNAGASSDGPLKLLPDGHFDVVVIDECAQALEASCWVPLL 387
Query: 506 TGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRL--QRAGYPVKMLKTQYRMHPEVR 563
K + L GD QLP T+IS A G SL +RL +R ++ML QYRMH +
Sbjct: 388 KARKCI-LAGDHKQLPPTIISHKAALAGLALSLMERLVEERGAGVLRMLTVQYRMHQAIA 446
Query: 564 SFPSREFYDEALEDGSDVEDYTTRDWHEYRCF---G-PFSFFD-----IHEGKESQPAGS 614
+ S Y L + V + RD G P D + E +E
Sbjct: 447 QWASEALYHGRLTAHASVAGHLLRDLPGVAATEETGIPLLLVDTAGCGLFELEEEDEQSK 506
Query: 615 GSWINIDEVDFVLLLFHKLISM-YPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQK 673
G N EV V L L+ P + +A+I+PY QV ++ +
Sbjct: 507 G---NPGEVRLVRLHVQALVDAGVP----AGDVAVITPYNLQVDLLRQSL-----AQRHP 554
Query: 674 VVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCAS 731
++I +VDG QGREK+ I S VR++ K +GFLA+ RR+NV +TRA+ + VV C S
Sbjct: 555 ELEIKSVDGFQGREKEAVILSFVRSNRKGEVGFLAEDRRINVAVTRARRHVAVV-CDS 611
Score = 88 (36.0 bits), Expect = 2.7e-26, Sum P(2) = 2.7e-26
Identities = 17/36 (47%), Positives = 25/36 (69%)
Query: 258 NASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLL 293
+ASQ EA+ L +K +I GPPGTGKT T++ ++
Sbjct: 190 DASQKEAVLFALSQKELAIIHGPPGTGKTTTVVEII 225
Score = 41 (19.5 bits), Expect = 2.2e-21, Sum P(2) = 2.2e-21
Identities = 12/43 (27%), Positives = 25/43 (58%)
Query: 226 DLILSASEKSSGSQDQSW---KIPGLLHEYIKENHNASQLEAI 265
D +L ++K+ +++S +I LL + +KE A+ LE++
Sbjct: 298 DQVLGKTKKTQDKREKSHFRDEIK-LLRKELKEREEAAMLESL 339
>UNIPROTKB|H0Y455 [details] [associations]
symbol:DNA2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:9606 "Homo sapiens" [GO:0017108
"5'-flap endonuclease activity" evidence=IEA] [GO:0033567 "DNA
replication, Okazaki fragment processing" evidence=IEA] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=IEA]
InterPro:IPR026851 GO:GO:0017108 GO:GO:0043142 GO:GO:0033567
PANTHER:PTHR10887:SF14 EMBL:AL136233 HGNC:HGNC:2939
ProteinModelPortal:H0Y455 PRIDE:H0Y455 Ensembl:ENST00000440722
Bgee:H0Y455 Uniprot:H0Y455
Length = 375
Score = 305 (112.4 bits), Expect = 4.0e-26, P = 4.0e-26
Identities = 95/301 (31%), Positives = 149/301 (49%)
Query: 458 ILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDP 517
+ N +IV +T + S+ FD I+DEA+Q +P L PL ++ LVGD
Sbjct: 54 LYNSQLIVATTCMGINHPIFSRKI--FDFCIVDEASQISQPICLGPLFFS-RRFVLVGDH 110
Query: 518 VQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALED 577
QLP V++ A LG SLFKRL++ V L QYRM+ ++ S ++ Y+ LE
Sbjct: 111 QQLPPLVLNREARALGMSESLFKRLEQNKSAVVQLTVQYRMNSKIMSLSNKLTYEGKLEC 170
Query: 578 GSD------------------VE---DYTTRDW--HEYRCFGPFSFFDIHEGKESQPAGS 614
GSD +E DY+ W + P F + + +
Sbjct: 171 GSDKVANAVINLRHFKDVKLELEFYADYSDNPWLMGVFEPNNPVCFLNTDKVPAPEQVEK 230
Query: 615 GSWINIDEVDFVLLLFHKLISMYPQLKSS-SQLAIISPYRHQVKQFQERFKETFGVESQK 673
G N+ E L++F L S++ + S S + II+PYR Q+K + + G+
Sbjct: 231 GGVSNVTEAK--LIVF--LTSIFVKAGCSPSDIGIIAPYRQQLKIINDLLARSIGM---- 282
Query: 674 VVDITTVDGCQGREKDVAIFSCVRASDKKSIG-FLADYRRMNVGITRAKSSILVVGCAST 732
V++ TVD QGR+K + + S VR++ ++G L D+RR+NV ITRAK ++++GC +
Sbjct: 283 -VEVNTVDKYQGRDKSIVLVSFVRSNKDGTVGELLKDWRRLNVAITRAKHKLILLGCVPS 341
Query: 733 L 733
L
Sbjct: 342 L 342
>SGD|S000001500 [details] [associations]
symbol:HCS1 "Hexameric DNA polymerase alpha-associated DNA
helicase A" species:4932 "Saccharomyces cerevisiae" [GO:0003677
"DNA binding" evidence=IEA] [GO:0043141 "ATP-dependent 5'-3' DNA
helicase activity" evidence=IDA] [GO:0005658 "alpha DNA
polymerase:primase complex" evidence=IDA] [GO:0006273 "lagging
strand elongation" evidence=IC] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0033203 "DNA helicase A
complex" evidence=IDA] InterPro:IPR003593 InterPro:IPR004483
SMART:SM00382 SGD:S000001500 GO:GO:0005524 GO:GO:0005737
GO:GO:0003677 EMBL:BK006944 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 EMBL:X74152 GO:GO:0006273 GO:GO:0043141
HOGENOM:HOG000185831 OrthoDB:EOG444PTN GO:GO:0033203 EMBL:Z28017
PIR:S34700 RefSeq:NP_012908.1 ProteinModelPortal:P34243 SMR:P34243
DIP:DIP-1383N IntAct:P34243 MINT:MINT-399891 STRING:P34243
PaxDb:P34243 EnsemblFungi:YKL017C GeneID:853852 KEGG:sce:YKL017C
CYGD:YKL017c GeneTree:ENSGT00700000104572 OMA:QGGDFPE
SABIO-RK:P34243 NextBio:975085 Genevestigator:P34243
GermOnline:YKL017C TIGRFAMs:TIGR00376 Uniprot:P34243
Length = 683
Score = 281 (104.0 bits), Expect = 5.2e-26, Sum P(3) = 5.2e-26
Identities = 94/287 (32%), Positives = 147/287 (51%)
Query: 484 FDVVIIDEAAQAVEPATLVPLATGCKQ---VFLVGDPVQLPATVISPVAEHLGYG--TSL 538
FD +IIDE +QA+EP +PL Q + L GD QLP T+ + +++ + T+L
Sbjct: 389 FDTLIIDEVSQAMEPQCWIPLIAHQNQFHKLVLAGDNKQLPPTIKTEDDKNVIHNLETTL 448
Query: 539 FKRLQRAGYP----VKMLKTQYRMHPEVRSFPSREFYD-EALEDGS-------DVE--DY 584
F R+ + +P VK L QYRM+ ++ FPS Y+ + L D + D+ D
Sbjct: 449 FDRIIKI-FPKRDMVKFLNVQYRMNQKIMEFPSHSMYNGKLLADATVANRLLIDLPTVDA 507
Query: 585 T-TRDWHEYRCFGPFSFFDIHEGKESQPAGS-----GSWINIDEVDFVLLLFHKLISMYP 638
T + D + + P ++D +G E Q GS N E+ V L S
Sbjct: 508 TPSEDDDDTKI--PLIWYDT-QGDEFQETADEATILGSKYNEGEIAIVKEHIENLRSF-- 562
Query: 639 QLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRA 698
+ +S + +ISPY QV ++ + + ++I+TVDG QGREKDV I S VR+
Sbjct: 563 NVPENS-IGVISPYNAQVSHLKKLIHDELKLTD---IEISTVDGFQGREKDVIILSLVRS 618
Query: 699 SDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKS 745
++K +GFL + RR+NV +TR + ++VVG L+ + N +KS
Sbjct: 619 NEKFEVGFLKEERRLNVAMTRPRRQLVVVGNIEVLQ--RCGNKYLKS 663
Score = 96 (38.9 bits), Expect = 5.2e-26, Sum P(3) = 5.2e-26
Identities = 30/109 (27%), Positives = 53/109 (48%)
Query: 197 RLFSLKICSLSTIAREYLALRSVGSL--PFKDLILS--ASEKSSGSQDQSWKIPGLLHEY 252
+L+ LK ++ T R +R + + P +D I+ +E+ S++ + +
Sbjct: 147 KLYILKTTNVVTYNRMESTMRKLSEISSPIQDKIIQYLVNERPFIPNTNSFQN---IKSF 203
Query: 253 IKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATP 301
+ N N SQ AI+ + +I GPPGTGKT T++ L+ +L P
Sbjct: 204 LNPNLNDSQKTAINFAI-NNDLTIIHGPPGTGKTFTLIELIQQLLIKNP 251
Score = 42 (19.8 bits), Expect = 5.2e-26, Sum P(3) = 5.2e-26
Identities = 8/15 (53%), Positives = 11/15 (73%)
Query: 379 CAPSNSALDEIVLRL 393
C PSN ++D I+ RL
Sbjct: 258 CGPSNISVDTILERL 272
>UNIPROTKB|Q8QHA5 [details] [associations]
symbol:dna2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:8355 "Xenopus laevis" [GO:0000076
"DNA replication checkpoint" evidence=ISS] [GO:0000729 "DNA
double-strand break processing" evidence=ISS] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003678 "DNA helicase activity"
evidence=ISS] [GO:0004518 "nuclease activity" evidence=ISS]
[GO:0006260 "DNA replication" evidence=ISS] [GO:0006264
"mitochondrial DNA replication" evidence=ISS] [GO:0006284
"base-excision repair" evidence=ISS] [GO:0016890 "site-specific
endodeoxyribonuclease activity, specific for altered base"
evidence=ISS] [GO:0017108 "5'-flap endonuclease activity"
evidence=ISS] [GO:0032508 "DNA duplex unwinding" evidence=ISS]
[GO:0033567 "DNA replication, Okazaki fragment processing"
evidence=ISS] [GO:0043137 "DNA replication, removal of RNA primer"
evidence=ISS] [GO:0043139 "5'-3' DNA helicase activity"
evidence=ISS] [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=ISS] [GO:0045740 "positive regulation of DNA
replication" evidence=ISS] [GO:0005760 "gamma DNA polymerase
complex" evidence=ISS] InterPro:IPR026851 InterPro:IPR014808
Pfam:PF08696 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0046872 GO:GO:0006284 GO:GO:0003677 GO:GO:0051539
GO:GO:0016890 GO:GO:0045740 GO:GO:0000729 GO:GO:0017108
GO:GO:0000076 GO:GO:0043137 GO:GO:0043139 GO:GO:0043142
GO:GO:0006264 PANTHER:PTHR10887:SF14 CTD:1763 HOVERGEN:HBG081456
KO:K10742 EMBL:AF474372 RefSeq:NP_001079231.1 UniGene:Xl.17390
ProteinModelPortal:Q8QHA5 GeneID:378492 KEGG:xla:378492
Xenbase:XB-GENE-5829000 Uniprot:Q8QHA5
Length = 1053
Score = 299 (110.3 bits), Expect = 8.3e-26, Sum P(2) = 8.3e-26
Identities = 94/273 (34%), Positives = 137/273 (50%)
Query: 484 FDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQ 543
FD I+DEA+Q +P L PL + V LVGD QLP V S A LG SLFKRL+
Sbjct: 757 FDFCIVDEASQISQPICLGPLFFADRFV-LVGDHQQLPPLVKSAEARELGMSESLFKRLE 815
Query: 544 RAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSD-VEDYTTRDWHEYRCFGPFSFFD 602
R V L QYRM+ ++ + ++ Y+ LE SD V + + H F +
Sbjct: 816 RNQEAVVQLTVQYRMNSKIMALSNKLVYEGRLECASDRVSNAVVQLPHIKTLLLELEFRE 875
Query: 603 IHEG---KES-QPAGSGSWINIDEVDFV--------------LLLFHKLISMYPQLKSS- 643
E K+ +P+ ++N +++ + L+FH L +Y LK+
Sbjct: 876 SQESMWIKDVLEPSNPVCFLNTEKIPALETEEKGGISNWIEAKLVFH-LTKLY--LKAGC 932
Query: 644 --SQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDK 701
S + II+PYR Q+K F S V++ TVD QGR+K V I S VR++
Sbjct: 933 RPSDIGIIAPYRQQLKMISNYFNSL----SASAVEVNTVDKYQGRDKSVIIVSFVRSNID 988
Query: 702 KSIG-FLADYRRMNVGITRAKSSILVVGCASTL 733
+G L D+RR+NV +TRAK ++++GC TL
Sbjct: 989 GKLGDLLKDWRRLNVALTRAKHKLIMLGCVPTL 1021
Score = 81 (33.6 bits), Expect = 8.3e-26, Sum P(2) = 8.3e-26
Identities = 21/42 (50%), Positives = 26/42 (61%)
Query: 258 NASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHA 299
N Q +A+ LL K + LI G PGTGKT TI L+ IL+A
Sbjct: 628 NKPQKQAMKRVLLSKDYTLIVGMPGTGKTTTICTLVR-ILYA 668
>UNIPROTKB|E2R760 [details] [associations]
symbol:IGHMBP2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0043141 "ATP-dependent 5'-3' DNA helicase
activity" evidence=IEA] [GO:0043022 "ribosome binding"
evidence=IEA] [GO:0032797 "SMN complex" evidence=IEA] [GO:0032575
"ATP-dependent 5'-3' RNA helicase activity" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000049
"tRNA binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000058 InterPro:IPR001374 InterPro:IPR003593
InterPro:IPR004483 InterPro:IPR026853 Pfam:PF01424 Pfam:PF01428
PROSITE:PS51039 PROSITE:PS51061 SMART:SM00154 SMART:SM00382
SMART:SM00393 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0051260
GO:GO:0043022 GO:GO:0000049 InterPro:IPR014001 SMART:SM00487
GO:GO:0043141 GO:GO:0032797 GeneTree:ENSGT00700000104572
TIGRFAMs:TIGR00376 Gene3D:4.10.1110.10 GO:GO:0032575
PANTHER:PTHR10887:SF23 EMBL:AAEX03011604 Ensembl:ENSCAFT00000038980
NextBio:20858044 Uniprot:E2R760
Length = 992
Score = 288 (106.4 bits), Expect = 1.3e-25, Sum P(2) = 1.3e-25
Identities = 95/297 (31%), Positives = 141/297 (47%)
Query: 449 KDRD--SIRSAILNEAVIVCSTLSFSGSALLSKL-NHGFDVVIIDEAAQAVEPATLVPLA 505
K+R+ ++ ++ + AV++ + S L L + FDVV+IDE AQA+E + +PL
Sbjct: 330 KEREEAAMLESLTSAAVVLATNTGASSDGPLKLLPDTHFDVVVIDECAQALEASCWIPLL 389
Query: 506 TGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRL--QRAGYPVKMLKTQYRMHPEVR 563
K + L GD QLP T +S A G SL +RL + V+ L QYRMH +
Sbjct: 390 KARKCI-LAGDHKQLPPTTVSHKAALAGLSLSLMERLAEEHGARVVRTLTVQYRMHQAIM 448
Query: 564 SFPSREFYDEALEDGSDVEDYTTRDWHEYRCF---G-PFSFFD-----IHEGKESQPAGS 614
+ S Y L V + RD G P D + E ++
Sbjct: 449 RWASEALYHGQLTAHPSVAGHLLRDLPGVAATEETGIPLLLVDTAGCGLFELEDDDDQSK 508
Query: 615 GSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKV 674
G N EV V L L+ Q +S +A+I+PY QV ++
Sbjct: 509 G---NPGEVRLVSLHIQALVDAGVQ---ASDIAVITPYNLQVDLLRQSL-----AHRHPE 557
Query: 675 VDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCAS 731
++I +VDG QGREK+ + S VR++ K +GFLA+ RR+NV +TRA+ + VV C S
Sbjct: 558 LEIKSVDGFQGREKEAVVLSFVRSNRKGEVGFLAEDRRINVAVTRARRHVAVV-CDS 613
Score = 90 (36.7 bits), Expect = 1.3e-25, Sum P(2) = 1.3e-25
Identities = 17/36 (47%), Positives = 25/36 (69%)
Query: 258 NASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLL 293
+ASQ EA+ L +K +I GPPGTGKT T++ ++
Sbjct: 192 DASQKEAVSFALSQKELAIIHGPPGTGKTTTVVEII 227
Score = 40 (19.1 bits), Expect = 2.1e-20, Sum P(2) = 2.1e-20
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 243 WKIPGLLHEYIKENHNASQLEAI 265
W LL + +KE A+ LE++
Sbjct: 319 WNEVKLLRKELKEREEAAMLESL 341
>UNIPROTKB|E2R8W1 [details] [associations]
symbol:IGHMBP2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0043141 "ATP-dependent 5'-3' DNA helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000058
InterPro:IPR001374 InterPro:IPR003593 InterPro:IPR004483
InterPro:IPR026853 Pfam:PF01424 Pfam:PF01428 PROSITE:PS51039
PROSITE:PS51061 SMART:SM00154 SMART:SM00382 SMART:SM00393
GO:GO:0005524 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
InterPro:IPR014001 SMART:SM00487 GO:GO:0043141
GeneTree:ENSGT00700000104572 TIGRFAMs:TIGR00376 Gene3D:4.10.1110.10
CTD:3508 OMA:HARQRIS PANTHER:PTHR10887:SF23 EMBL:AAEX03011604
RefSeq:XP_540807.2 Ensembl:ENSCAFT00000017093 GeneID:483686
KEGG:cfa:483686 Uniprot:E2R8W1
Length = 1010
Score = 288 (106.4 bits), Expect = 1.3e-25, Sum P(2) = 1.3e-25
Identities = 95/297 (31%), Positives = 141/297 (47%)
Query: 449 KDRD--SIRSAILNEAVIVCSTLSFSGSALLSKL-NHGFDVVIIDEAAQAVEPATLVPLA 505
K+R+ ++ ++ + AV++ + S L L + FDVV+IDE AQA+E + +PL
Sbjct: 330 KEREEAAMLESLTSAAVVLATNTGASSDGPLKLLPDTHFDVVVIDECAQALEASCWIPLL 389
Query: 506 TGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRL--QRAGYPVKMLKTQYRMHPEVR 563
K + L GD QLP T +S A G SL +RL + V+ L QYRMH +
Sbjct: 390 KARKCI-LAGDHKQLPPTTVSHKAALAGLSLSLMERLAEEHGARVVRTLTVQYRMHQAIM 448
Query: 564 SFPSREFYDEALEDGSDVEDYTTRDWHEYRCF---G-PFSFFD-----IHEGKESQPAGS 614
+ S Y L V + RD G P D + E ++
Sbjct: 449 RWASEALYHGQLTAHPSVAGHLLRDLPGVAATEETGIPLLLVDTAGCGLFELEDDDDQSK 508
Query: 615 GSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKV 674
G N EV V L L+ Q +S +A+I+PY QV ++
Sbjct: 509 G---NPGEVRLVSLHIQALVDAGVQ---ASDIAVITPYNLQVDLLRQSL-----AHRHPE 557
Query: 675 VDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCAS 731
++I +VDG QGREK+ + S VR++ K +GFLA+ RR+NV +TRA+ + VV C S
Sbjct: 558 LEIKSVDGFQGREKEAVVLSFVRSNRKGEVGFLAEDRRINVAVTRARRHVAVV-CDS 613
Score = 90 (36.7 bits), Expect = 1.3e-25, Sum P(2) = 1.3e-25
Identities = 17/36 (47%), Positives = 25/36 (69%)
Query: 258 NASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLL 293
+ASQ EA+ L +K +I GPPGTGKT T++ ++
Sbjct: 192 DASQKEAVSFALSQKELAIIHGPPGTGKTTTVVEII 227
Score = 40 (19.1 bits), Expect = 2.2e-20, Sum P(2) = 2.2e-20
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 243 WKIPGLLHEYIKENHNASQLEAI 265
W LL + +KE A+ LE++
Sbjct: 319 WNEVKLLRKELKEREEAAMLESL 341
>RGD|1306791 [details] [associations]
symbol:Dna2 "DNA replication helicase 2 homolog (yeast)"
species:10116 "Rattus norvegicus" [GO:0000076 "DNA replication
checkpoint" evidence=ISO;ISS] [GO:0000729 "DNA double-strand break
processing" evidence=ISO;ISS] [GO:0003677 "DNA binding"
evidence=ISO;ISS] [GO:0003678 "DNA helicase activity"
evidence=ISO;ISS] [GO:0004518 "nuclease activity" evidence=ISO;ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005760 "gamma DNA polymerase complex"
evidence=IEA;ISO] [GO:0006260 "DNA replication" evidence=ISO;ISS]
[GO:0006264 "mitochondrial DNA replication" evidence=IEA;ISO]
[GO:0006284 "base-excision repair" evidence=IEA;ISO] [GO:0016890
"site-specific endodeoxyribonuclease activity, specific for altered
base" evidence=IEA;ISO] [GO:0017108 "5'-flap endonuclease activity"
evidence=ISO;ISS] [GO:0032508 "DNA duplex unwinding" evidence=ISO]
[GO:0033567 "DNA replication, Okazaki fragment processing"
evidence=ISO;ISS] [GO:0042645 "mitochondrial nucleoid"
evidence=IEA;ISO] [GO:0043137 "DNA replication, removal of RNA
primer" evidence=IEA;ISO] [GO:0043139 "5'-3' DNA helicase activity"
evidence=ISO;ISS] [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=ISO;ISS] [GO:0043504 "mitochondrial DNA repair"
evidence=IEA;ISO] [GO:0045740 "positive regulation of DNA
replication" evidence=IEA;ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696
RGD:1306791 GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0006284
GO:GO:0003677 GO:GO:0051539 GO:GO:0042645 GO:GO:0016890
GO:GO:0045740 GO:GO:0000729 GO:GO:0017108 GO:GO:0000076
GO:GO:0043137 GO:GO:0005760 GO:GO:0043139 GO:GO:0043142
GO:GO:0033567 GO:GO:0043504 GO:GO:0006264 PANTHER:PTHR10887:SF14
GeneTree:ENSGT00550000074852 IPI:IPI00368049
ProteinModelPortal:D3ZG52 Ensembl:ENSRNOT00000000438
UCSC:RGD:1306791 OrthoDB:EOG4CZBF7 Uniprot:D3ZG52
Length = 1059
Score = 297 (109.6 bits), Expect = 1.4e-25, Sum P(2) = 1.4e-25
Identities = 92/299 (30%), Positives = 146/299 (48%)
Query: 458 ILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDP 517
+ N +V +T + S+ FD I+DEA+Q +P L PL ++ LVGD
Sbjct: 732 LYNSHPVVATTCMGISHPMFSRKT--FDFCIVDEASQISQPICLGPLFFS-RRFVLVGDH 788
Query: 518 VQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALED 577
QLP V++ A LG SLFKRL+R V L QYRM+ ++ S ++ Y+ LE
Sbjct: 789 KQLPPLVLNREARALGMSESLFKRLERNESAVVQLTIQYRMNRKIMSLSNKLTYEGKLEC 848
Query: 578 GSD----------------VE---DYTTRDWHE--YRCFGPFSFFDIHEGKESQPAGSGS 616
GSD +E DY+ W + P F + + + +G
Sbjct: 849 GSDRVANAVITLPNLKDVRLEFYADYSDNPWLAGVFEPDNPVCFLNTDKVPAPEQIENGG 908
Query: 617 WINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVD 676
N+ E ++ L I S S + II+PYR Q++ + + S +V+
Sbjct: 909 VSNVTEARLIVFLTSTFIKAGC---SPSDIGIIAPYRQQLRTITDLLARS----SVGMVE 961
Query: 677 ITTVDGCQGREKDVAIFSCVRASDKKSIG-FLADYRRMNVGITRAKSSILVVGCASTLR 734
+ TVD QGR+K + + S VR+++ ++G L D+RR+NV ITRAK ++++G S+L+
Sbjct: 962 VNTVDKYQGRDKSLILVSFVRSNEDGTLGELLKDWRRLNVAITRAKHKLILLGSVSSLK 1020
Score = 81 (33.6 bits), Expect = 1.4e-25, Sum P(2) = 1.4e-25
Identities = 21/42 (50%), Positives = 26/42 (61%)
Query: 258 NASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHA 299
N Q +A+ + LL K + LI G PGTGKT TI L+ IL A
Sbjct: 627 NKPQRQAMKKVLLSKDYTLIVGMPGTGKTTTICALVR-ILSA 667
>UNIPROTKB|Q60560 [details] [associations]
symbol:IGHMBP2 "DNA-binding protein SMUBP-2" species:10036
"Mesocricetus auratus" [GO:0000049 "tRNA binding" evidence=ISS]
[GO:0003723 "RNA binding" evidence=ISS] [GO:0005524 "ATP binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISS] [GO:0008186 "RNA-dependent ATPase activity"
evidence=ISS] [GO:0032575 "ATP-dependent 5'-3' RNA helicase
activity" evidence=ISS] [GO:0043022 "ribosome binding"
evidence=ISS] [GO:0043141 "ATP-dependent 5'-3' DNA helicase
activity" evidence=ISS] [GO:0043621 "protein self-association"
evidence=ISS] InterPro:IPR000058 InterPro:IPR001374
InterPro:IPR003593 InterPro:IPR004483 InterPro:IPR026853
Pfam:PF01424 Pfam:PF01428 PROSITE:PS51039 PROSITE:PS51061
SMART:SM00154 SMART:SM00382 SMART:SM00393 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0030424 GO:GO:0008270 GO:GO:0006351
GO:GO:0043621 GO:GO:0043022 GO:GO:0030529 GO:GO:0000049
InterPro:IPR014001 SMART:SM00487 GO:GO:0043141 TIGRFAMs:TIGR00376
Gene3D:4.10.1110.10 GO:GO:0032575 HOVERGEN:HBG077019
PANTHER:PTHR10887:SF23 EMBL:L15625 PIR:T48845
ProteinModelPortal:Q60560 SMR:Q60560 Uniprot:Q60560
Length = 989
Score = 288 (106.4 bits), Expect = 4.1e-25, Sum P(2) = 4.1e-25
Identities = 97/305 (31%), Positives = 141/305 (46%)
Query: 448 RKDRDSIRSAILNEAVIVCST-LSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLAT 506
R++ ++S + V+ +T S G L NH FDVV++DE AQA+E + +PL
Sbjct: 332 REEAAIVQSLTAADVVLATNTGASSDGPLKLLPENH-FDVVVVDECAQALEASCWIPLLK 390
Query: 507 GCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRL-QRAGY-PVKMLKTQYRMHPEVRS 564
K + L GD QLP T IS A G SL +RL ++ G V+ML QYRMH +
Sbjct: 391 APKCI-LAGDHRQLPPTTISHKAALAGLSRSLMERLVEKHGAGAVRMLTVQYRMHQAITR 449
Query: 565 FPSREFYDEALEDGSDVEDYTTRDW----HEYRCFGPFSFFDIHE-GK-ESQPAGSGSWI 618
+ S Y L V + +D P D G E S S
Sbjct: 450 WASEAMYHGQLTAHPSVAGHLLKDLPGVADTEETSVPLLLIDTAGCGLLELDEEDSQSKG 509
Query: 619 NIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDIT 678
N EV V L L+ + +A+I+PY QV ++ ++I
Sbjct: 510 NPGEVRLVTLHIQALVDAGVH---AGDIAVIAPYNLQVDLLRQSLSN-----KHPELEIK 561
Query: 679 TVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKH 738
+VDG QGREK+ I + VR++ K +GFLA+ RR+NV +TRA+ + V+ + T+
Sbjct: 562 SVDGFQGREKEAVILTFVRSNRKGEVGFLAEDRRINVAVTRARRHVAVICDSRTVNNHAF 621
Query: 739 WNNLV 743
LV
Sbjct: 622 LKTLV 626
Score = 85 (35.0 bits), Expect = 4.1e-25, Sum P(2) = 4.1e-25
Identities = 16/34 (47%), Positives = 23/34 (67%)
Query: 260 SQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLL 293
SQ EA+ L +K +I GPPGTGKT T++ ++
Sbjct: 194 SQKEAVSFALAQKEVAIIHGPPGTGKTTTVVEII 227
>UNIPROTKB|F1MHU8 [details] [associations]
symbol:IGHMBP2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051260 "protein homooligomerization" evidence=IEA]
[GO:0043141 "ATP-dependent 5'-3' DNA helicase activity"
evidence=IEA] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0032797 "SMN complex" evidence=IEA] [GO:0032575 "ATP-dependent
5'-3' RNA helicase activity" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000049 "tRNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000058
InterPro:IPR001374 InterPro:IPR003593 InterPro:IPR004483
InterPro:IPR026853 Pfam:PF01424 Pfam:PF01428 PROSITE:PS51039
PROSITE:PS51061 SMART:SM00154 SMART:SM00382 SMART:SM00393
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0051260 GO:GO:0043022
GO:GO:0000049 InterPro:IPR014001 SMART:SM00487 GO:GO:0043141
GO:GO:0032797 GeneTree:ENSGT00700000104572 TIGRFAMs:TIGR00376
Gene3D:4.10.1110.10 GO:GO:0032575 CTD:3508 OMA:HARQRIS
PANTHER:PTHR10887:SF23 EMBL:DAAA02063651 IPI:IPI01017505
RefSeq:XP_003584325.1 RefSeq:XP_003588118.1 UniGene:Bt.103594
Ensembl:ENSBTAT00000044489 GeneID:618606 KEGG:bta:618606
Uniprot:F1MHU8
Length = 981
Score = 284 (105.0 bits), Expect = 5.4e-25, Sum P(2) = 5.4e-25
Identities = 96/297 (32%), Positives = 144/297 (48%)
Query: 449 KDRD--SIRSAILNEAVIVCSTLSFSGSALLSKL-NHGFDVVIIDEAAQAVEPATLVPLA 505
KDR+ ++ ++ +V++ + S L L + FD+V+IDE AQA+E + +PL
Sbjct: 328 KDREEAAMLESLAAASVVLATNTGASADGPLKLLPDSHFDMVVIDECAQALEASCWIPLL 387
Query: 506 TGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRL-QRAGY-PVKMLKTQYRMHPEVR 563
K + L GD QLP T++S A G SL +RL +R G ++ML QYRMH +
Sbjct: 388 KARKCI-LAGDHKQLPPTIVSHKAALAGLSLSLMERLAERHGAGALRMLTVQYRMHQAIA 446
Query: 564 SFPSREFYDEALEDGSDVEDYTTRDWHEYRCF---G-PFSFFD-----IHEGKESQPAGS 614
+ S Y L V + RD G P D + E +E
Sbjct: 447 RWASEALYHGQLTAHPSVAGHLLRDLPGVAATEETGVPLLLVDTAGCGLLELEEDDEQSK 506
Query: 615 GSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKV 674
G N EV V L L+ + ++ +A+I+PY QV ++
Sbjct: 507 G---NPGEVRLVGLHVQALVDAGVR---AADIAVITPYNLQVDLLRQSLAHRL-----PE 555
Query: 675 VDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCAS 731
++I +VDG QGREK+ I S VR++ K +GFLA+ RR+NV +TRA+ + VV C S
Sbjct: 556 LEIRSVDGFQGREKEAVILSFVRSNRKGEVGFLAEDRRINVAVTRARRHVAVV-CDS 611
Score = 88 (36.0 bits), Expect = 5.4e-25, Sum P(2) = 5.4e-25
Identities = 17/36 (47%), Positives = 25/36 (69%)
Query: 258 NASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLL 293
+ASQ EA+ L +K +I GPPGTGKT T++ ++
Sbjct: 190 DASQQEAVLFALSQKELAIIHGPPGTGKTTTVVEII 225
>UNIPROTKB|F1PYQ4 [details] [associations]
symbol:DNA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0033567 "DNA replication, Okazaki
fragment processing" evidence=IEA] [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 InterPro:IPR014001 PROSITE:PS51192
GO:GO:0017108 GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14
GeneTree:ENSGT00550000074852 EMBL:AAEX03002775 EMBL:AAEX03002776
EMBL:AAEX03002777 Ensembl:ENSCAFT00000036654 Uniprot:F1PYQ4
Length = 997
Score = 278 (102.9 bits), Expect = 6.1e-25, Sum P(2) = 6.1e-25
Identities = 94/280 (33%), Positives = 140/280 (50%)
Query: 458 ILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDP 517
+ N IV +T + S+ FD I+DEA+Q +P L PL + V LVGD
Sbjct: 704 LYNSHRIVATTCMGINHPIFSRKT--FDFCIVDEASQISQPICLGPLFFSQRFV-LVGDH 760
Query: 518 VQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALED 577
QLP V++ A LG SLFKRL++ V L QYRM+ ++ S ++ YD LE
Sbjct: 761 QQLPPLVLNREARALGMSESLFKRLEQNKNAVVQLTVQYRMNSKIMSLSNKLTYDGKLEC 820
Query: 578 GSD-VEDYTTR--DWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLI 634
GSD V + + + + F + D E P G++ + V F L
Sbjct: 821 GSDKVANAVVNLPNLKDVKLELEF-YADYSEN----PWMIGAFEPNNPVCF---LNTDKA 872
Query: 635 SMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFS 694
P S + II+PYR Q+K + + S ++V++ TVD QGR+K + + S
Sbjct: 873 GCKP-----SDIGIIAPYRQQLKIINDLLFHS----SIRMVEVNTVDKYQGRDKSIILVS 923
Query: 695 CVRASDKKSIG-FLADYRRMNVGITRAKSSILVVGCASTL 733
VR++ IG L D+RR+NV ITRAK ++++GC +L
Sbjct: 924 FVRSNKDGPIGELLKDWRRLNVAITRAKHKLILLGCVPSL 963
Score = 94 (38.1 bits), Expect = 6.1e-25, Sum P(2) = 6.1e-25
Identities = 43/147 (29%), Positives = 68/147 (46%)
Query: 160 RMYLAGE---VIHINKDAVKSQRLLNIHSLITSSVSAV-EKRLFSL----KICSLSTIAR 211
R+ L+GE + +++ VK + ++ L+ +VS + E LF L K C + T
Sbjct: 489 RIILSGEERTLFALSRGYVKEINVTSVTCLLDRNVSVLPESTLFRLDQEEKTCDIDTPLG 548
Query: 212 EYLAL--RSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIK---ENHNASQLEAIH 266
L + S +DLI+ E S S +P + + + N Q +A+
Sbjct: 549 NLSKLMENTCVSQKLRDLIIDFREPQFISYLSS-VLPYDAKDTVACILKGLNKPQRQAMK 607
Query: 267 EGLLRKAFVLIQGPPGTGKTQTILGLL 293
+ LL K + LI G PGTGKT TI L+
Sbjct: 608 KVLLSKDYTLIVGMPGTGKTTTICTLV 634
Score = 40 (19.1 bits), Expect = 2.6e-19, Sum P(2) = 2.6e-19
Identities = 12/53 (22%), Positives = 23/53 (43%)
Query: 430 VEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNH 482
VEQ+ DDS+ +++ ++ L + C L+ + +K NH
Sbjct: 381 VEQQTDDSSVPIGMLPKIKEETQHLKLTHLEYFSLWCLMLTLESQSKDNKKNH 433
>RGD|68325 [details] [associations]
symbol:Ighmbp2 "immunoglobulin mu binding protein 2" species:10116
"Rattus norvegicus" [GO:0000049 "tRNA binding" evidence=IEA;ISO;ISS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0001078 "RNA polymerase II
core promoter proximal region sequence-specific DNA binding
transcription factor activity involved in negative regulation of
transcription" evidence=IDA] [GO:0003677 "DNA binding"
evidence=IEA;ISO;IDA] [GO:0003723 "RNA binding" evidence=ISO;ISS]
[GO:0005524 "ATP binding" evidence=IEA;ISO;ISS] [GO:0005634
"nucleus" evidence=IEA;ISO;ISS] [GO:0005737 "cytoplasm"
evidence=IEA;ISO;ISS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISO;ISS] [GO:0008134 "transcription factor binding"
evidence=IEA;ISO] [GO:0008186 "RNA-dependent ATPase activity"
evidence=ISO;ISS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0021522 "spinal cord motor neuron differentiation" evidence=ISO]
[GO:0030424 "axon" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA;ISO] [GO:0032575 "ATP-dependent 5'-3' RNA helicase
activity" evidence=IEA;ISO;ISS] [GO:0032797 "SMN complex"
evidence=IEA;ISO] [GO:0043022 "ribosome binding"
evidence=IEA;ISO;ISS] [GO:0043025 "neuronal cell body" evidence=ISO]
[GO:0043141 "ATP-dependent 5'-3' DNA helicase activity"
evidence=IEA;ISO;ISS] [GO:0043621 "protein self-association"
evidence=ISS] [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISO] [GO:0051260 "protein homooligomerization"
evidence=IEA;ISO] InterPro:IPR000058 InterPro:IPR001374
InterPro:IPR003593 InterPro:IPR004483 InterPro:IPR026853
Pfam:PF01424 Pfam:PF01428 PROSITE:PS51039 PROSITE:PS51061
SMART:SM00154 SMART:SM00382 SMART:SM00393 RGD:68325 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0003677
GO:GO:0030424 GO:GO:0001078 GO:GO:0008270 GO:GO:0051260
GO:GO:0043621 GO:GO:0043022 GO:GO:0030529 GO:GO:0000049
eggNOG:COG1112 InterPro:IPR014001 SMART:SM00487 GO:GO:0043141
GO:GO:0032797 HOGENOM:HOG000185831 TIGRFAMs:TIGR00376
Gene3D:4.10.1110.10 GO:GO:0032575 CTD:3508 OrthoDB:EOG4GHZNJ
PANTHER:PTHR10887:SF23 EMBL:AF199411 IPI:IPI00190206
RefSeq:NP_113774.1 UniGene:Rn.23984 HSSP:P38935
ProteinModelPortal:Q9EQN5 SMR:Q9EQN5 STRING:Q9EQN5 PRIDE:Q9EQN5
GeneID:29532 KEGG:rno:29532 UCSC:RGD:68325 InParanoid:Q9EQN5
NextBio:609508 ArrayExpress:Q9EQN5 Genevestigator:Q9EQN5
Uniprot:Q9EQN5
Length = 988
Score = 283 (104.7 bits), Expect = 7.1e-25, Sum P(2) = 7.1e-25
Identities = 95/305 (31%), Positives = 143/305 (46%)
Query: 448 RKDRDSIRSAILNEAVIVCST-LSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLAT 506
R++ ++S + V+ +T S G L ++ FDVV++DE AQA+E + +PL
Sbjct: 332 REEAAIVQSLSAADVVLATNTGASTDGPLKLLPEDY-FDVVVVDECAQALEASCWIPLLK 390
Query: 507 GCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRL-QRAGYPV-KMLKTQYRMHPEVRS 564
K + L GD QLP T +S A G SL +RL ++ G V +ML QYRMH +
Sbjct: 391 APKCI-LAGDHKQLPPTTVSHKAALAGLSRSLMERLAEKHGAAVVRMLAVQYRMHQAITR 449
Query: 565 FPSREFYDEALEDGSDVEDYTTRDW----HEYRCFGPFSFFDIHE-GK-ESQPAGSGSWI 618
+ S Y L V + +D P D G E + S S
Sbjct: 450 WASEAMYHGQLTAHPSVAGHLLKDLPGVADTEETSVPLLLIDTAGCGLLELEEEDSQSKG 509
Query: 619 NIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDIT 678
N EV V L L+ Q + +A+I+PY QV ++ ++I
Sbjct: 510 NPGEVRLVTLHIQALVDAGVQ---AGDIAVIAPYNLQVDLLRQSLSN-----KHPELEIK 561
Query: 679 TVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKH 738
+VDG QGREK+ I + VR++ K +GFLA+ RR+NV +TRA+ + V+ + T+
Sbjct: 562 SVDGFQGREKEAVILTFVRSNRKGEVGFLAEDRRINVAVTRARRHVAVICDSHTVNNHAF 621
Query: 739 WNNLV 743
LV
Sbjct: 622 LKTLV 626
Score = 88 (36.0 bits), Expect = 7.1e-25, Sum P(2) = 7.1e-25
Identities = 23/68 (33%), Positives = 36/68 (52%)
Query: 226 DLILSASEKSSGSQDQSWKIPGLLHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGK 285
D++L S S ++ IP L + + SQ EA+ L +K +I GPPGTGK
Sbjct: 167 DVLLGGSTPSPATE-----IPPLT--FYNTTLDPSQKEAVSFALAQKEVAIIHGPPGTGK 219
Query: 286 TQTILGLL 293
T T++ ++
Sbjct: 220 TTTVVEII 227
>UNIPROTKB|Q9EQN5 [details] [associations]
symbol:Ighmbp2 "DNA-binding protein SMUBP-2" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000058 InterPro:IPR001374 InterPro:IPR003593
InterPro:IPR004483 InterPro:IPR026853 Pfam:PF01424 Pfam:PF01428
PROSITE:PS51039 PROSITE:PS51061 SMART:SM00154 SMART:SM00382
SMART:SM00393 RGD:68325 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 GO:GO:0003677 GO:GO:0030424 GO:GO:0001078
GO:GO:0008270 GO:GO:0051260 GO:GO:0043621 GO:GO:0043022
GO:GO:0030529 GO:GO:0000049 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 GO:GO:0043141 GO:GO:0032797 HOGENOM:HOG000185831
TIGRFAMs:TIGR00376 Gene3D:4.10.1110.10 GO:GO:0032575 CTD:3508
OrthoDB:EOG4GHZNJ PANTHER:PTHR10887:SF23 EMBL:AF199411
IPI:IPI00190206 RefSeq:NP_113774.1 UniGene:Rn.23984 HSSP:P38935
ProteinModelPortal:Q9EQN5 SMR:Q9EQN5 STRING:Q9EQN5 PRIDE:Q9EQN5
GeneID:29532 KEGG:rno:29532 UCSC:RGD:68325 InParanoid:Q9EQN5
NextBio:609508 ArrayExpress:Q9EQN5 Genevestigator:Q9EQN5
Uniprot:Q9EQN5
Length = 988
Score = 283 (104.7 bits), Expect = 7.1e-25, Sum P(2) = 7.1e-25
Identities = 95/305 (31%), Positives = 143/305 (46%)
Query: 448 RKDRDSIRSAILNEAVIVCST-LSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLAT 506
R++ ++S + V+ +T S G L ++ FDVV++DE AQA+E + +PL
Sbjct: 332 REEAAIVQSLSAADVVLATNTGASTDGPLKLLPEDY-FDVVVVDECAQALEASCWIPLLK 390
Query: 507 GCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRL-QRAGYPV-KMLKTQYRMHPEVRS 564
K + L GD QLP T +S A G SL +RL ++ G V +ML QYRMH +
Sbjct: 391 APKCI-LAGDHKQLPPTTVSHKAALAGLSRSLMERLAEKHGAAVVRMLAVQYRMHQAITR 449
Query: 565 FPSREFYDEALEDGSDVEDYTTRDW----HEYRCFGPFSFFDIHE-GK-ESQPAGSGSWI 618
+ S Y L V + +D P D G E + S S
Sbjct: 450 WASEAMYHGQLTAHPSVAGHLLKDLPGVADTEETSVPLLLIDTAGCGLLELEEEDSQSKG 509
Query: 619 NIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDIT 678
N EV V L L+ Q + +A+I+PY QV ++ ++I
Sbjct: 510 NPGEVRLVTLHIQALVDAGVQ---AGDIAVIAPYNLQVDLLRQSLSN-----KHPELEIK 561
Query: 679 TVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKH 738
+VDG QGREK+ I + VR++ K +GFLA+ RR+NV +TRA+ + V+ + T+
Sbjct: 562 SVDGFQGREKEAVILTFVRSNRKGEVGFLAEDRRINVAVTRARRHVAVICDSHTVNNHAF 621
Query: 739 WNNLV 743
LV
Sbjct: 622 LKTLV 626
Score = 88 (36.0 bits), Expect = 7.1e-25, Sum P(2) = 7.1e-25
Identities = 23/68 (33%), Positives = 36/68 (52%)
Query: 226 DLILSASEKSSGSQDQSWKIPGLLHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGK 285
D++L S S ++ IP L + + SQ EA+ L +K +I GPPGTGK
Sbjct: 167 DVLLGGSTPSPATE-----IPPLT--FYNTTLDPSQKEAVSFALAQKEVAIIHGPPGTGK 219
Query: 286 TQTILGLL 293
T T++ ++
Sbjct: 220 TTTVVEII 227
>UNIPROTKB|E1C0Z0 [details] [associations]
symbol:HELZ2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0004540 "ribonuclease
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0030374
"ligand-dependent nuclear receptor transcription coactivator
activity" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR001900 InterPro:IPR007087 InterPro:IPR015880
InterPro:IPR026855 Pfam:PF00773 PROSITE:PS00028 SMART:SM00355
SMART:SM00955 GO:GO:0008270 GO:GO:0003723 GO:GO:0005622
GO:GO:0004386 GO:GO:0004540 OMA:FRAAHIM PANTHER:PTHR10887:SF16
GeneTree:ENSGT00550000074391 EMBL:AADN02019144 IPI:IPI00594758
Ensembl:ENSGALT00000009906 Uniprot:E1C0Z0
Length = 2565
Score = 303 (111.7 bits), Expect = 1.7e-24, Sum P(4) = 1.7e-24
Identities = 100/310 (32%), Positives = 157/310 (50%)
Query: 463 VIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATG--CKQVFLVGDPVQL 520
VI+C T S + + L KLN ++IDE A + EP TL+PL + ++V L+GD QL
Sbjct: 2252 VILC-TCSSASAGSLEKLN--VKQILIDECAMSTEPETLIPLVSHKHAEKVVLLGDHKQL 2308
Query: 521 PATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSD 580
V + + LG TSLF+R Q+ + ML TQYRMH + FPS+EFY+ L+
Sbjct: 2309 KPVVNNDFCKSLGMETSLFERYQKQAW---MLDTQYRMHKNICEFPSQEFYEHRLKTCPQ 2365
Query: 581 VEDYTTRDWHEY-RCFGPFSFFDIHEGKE------SQPAGSGSWINIDEVDFVLLLFHKL 633
+ + +H+ RC P F + EGKE ++ S N +EV+ + K
Sbjct: 2366 LLRIPSVLYHKNNRCC-PIIFGHV-EGKEQSLVISTEEGNENSKANPEEVEQAVRTA-KQ 2422
Query: 634 ISMYPQLKSSSQLAIISPYRHQVKQFQERF-KETF-GV------ESQ----KVVDITTVD 681
+++ ++ S +AI+SPY QV + +R KE GV +SQ + V ++TV
Sbjct: 2423 LTLDGTIRPQS-IAILSPYNAQVSEINKRLLKEGIRGVTVCTIMKSQGSEWRYVILSTVR 2481
Query: 682 GCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNN 741
C E D ++ KK +GF+ D ++NV ITRA+ + ++G L + W
Sbjct: 2482 SCSRHEIDK---KPTKSWQKKHLGFVTDPNQVNVAITRAQEGLCIIGNRYLLECNPLWRR 2538
Query: 742 LVKSAEKQDC 751
L++ +C
Sbjct: 2539 LLQHYIDHNC 2548
Score = 139 (54.0 bits), Expect = 0.00058, Sum P(3) = 0.00058
Identities = 75/306 (24%), Positives = 128/306 (41%)
Query: 448 RKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHG-FDVVIIDEAAQAVEPATLVPL-- 504
R R R I +I+ T S L K+ G F ++IDEAAQ +E L+PL
Sbjct: 625 RSFRHPTREEIDKHPIII--TTSMLSKHL--KVAPGYFTHIMIDEAAQMLECEALIPLSY 680
Query: 505 ATGCKQVFLVGDPVQLPATVISPVAEHLGYGT---SLFKRLQRAGYPVKM-----LKTQY 556
AT ++ L GD +Q+ + Y T LF+ Q+ + V M Y
Sbjct: 681 ATFETRIVLAGDHMQITPKLFCVADGQSAYHTLLNRLFQFYQKEKHEVAMKSRIIFNENY 740
Query: 557 RMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGS 616
R + F S+ FY + G+ + + + + + P F + G + S
Sbjct: 741 RSTAGIIEFVSKHFY---IGKGNAI--HASGNIPPHPEIYPLMFCHV-PGVAERDMSMIS 794
Query: 617 WINIDEVDFVLLLFHKLISMYPQ---LKSSSQLAIISPYRHQVKQFQERFKETFGVESQK 673
W N E+ V+ ++ +P + ++ ++S + QV ++ ++ + +
Sbjct: 795 WHNASEITQVVEKVEEIYQRWPHEWGAQDQKRICVVS-HGVQVSAIRQELRKK---QLPE 850
Query: 674 VVDITTVDGCQGREKDVAIFSCVRASDKKSIG------FLADYRRMNVGITRAKSSILVV 727
VV + + GRE V I S V S+ + F + R +N +TRA+S ++VV
Sbjct: 851 VV-VENYENLPGREFRVIIISTVHTSESLRVSASHNHEFFNEARVLNTIMTRAQSQVIVV 909
Query: 728 GCASTL 733
G A L
Sbjct: 910 GDAVAL 915
Score = 90 (36.7 bits), Expect = 1.7e-24, Sum P(4) = 1.7e-24
Identities = 36/101 (35%), Positives = 50/101 (49%)
Query: 186 LITSSVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKI 245
LI + V K K+ + S +A+ +AL P K L ++ KS Q +S+ +
Sbjct: 2008 LIPKMLPDVRKENAIWKLQNASDLAKS-IALGH--EPPSKALTVT---KSKILQQKSFDL 2061
Query: 246 PGLLHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKT 286
PG + N SQ +A+ L K F LIQGPPGTGKT
Sbjct: 2062 PGSQRKL-----NPSQNKAVLNALT-KPFTLIQGPPGTGKT 2096
Score = 49 (22.3 bits), Expect = 1.3e-20, Sum P(4) = 1.3e-20
Identities = 12/30 (40%), Positives = 16/30 (53%)
Query: 275 VLIQGPPGTGKTQTILGLLSAILHATPARV 304
+LI GP GTGKT T+ ++ RV
Sbjct: 537 LLIYGPFGTGKTFTLAMATLEVIRQPNTRV 566
Score = 44 (20.5 bits), Expect = 1.7e-24, Sum P(4) = 1.7e-24
Identities = 35/146 (23%), Positives = 64/146 (43%)
Query: 3 VDKDKPQDEASIFRFCKIILGWDYFRLVKESQERNDKNSKKVDRGK-LGL-REVKDTYKD 60
V+ KP A + +C++ L + SQE + + V+ + L + V+ ++
Sbjct: 25 VENGKPSAPAPVHFYCRLCL------VTFSSQESFENHCSSVEHVQMLSVDTSVQWMHRA 78
Query: 61 VDDYLATFEPLLFEEVKAQ---IIQKKDEEEVQEWKLRL-VMECGEADGFHLPSVTYE-- 114
L+TF+ EV + EE+QEW R+ V + V+Y+
Sbjct: 79 PPLGLSTFKLCSRAEVCEMGDSCTKAHSNEELQEWIQRVNVAAKKKKRAIKEGLVSYQDR 138
Query: 115 -ADEVESISPNDLLLLSKEEFKEGST 139
E ++ S N++L++S E+ EG T
Sbjct: 139 LIAEYQTCS-NEVLIIS--EYVEGIT 161
Score = 40 (19.1 bits), Expect = 1.3e-20, Sum P(4) = 1.3e-20
Identities = 10/38 (26%), Positives = 18/38 (47%)
Query: 387 DEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSV 424
DE+++ +L G D + K+V I +A N +
Sbjct: 1085 DEVLVEILQNGTADSSSLRPQGKVVGILKRAERERNFI 1122
Score = 38 (18.4 bits), Expect = 7.1e-24, Sum P(4) = 7.1e-24
Identities = 9/40 (22%), Positives = 18/40 (45%)
Query: 55 KDTYKDVDDYLATFEPLLFEEVKAQIIQKKDEEEVQEWKL 94
KD YK +Y + P+ E + + + D + + K+
Sbjct: 1851 KDKYKHAGEYSKVWTPMSAMESASCAVAENDSIILHDVKI 1890
Score = 37 (18.1 bits), Expect = 1.7e-24, Sum P(4) = 1.7e-24
Identities = 7/18 (38%), Positives = 13/18 (72%)
Query: 379 CAPSNSALD---EIVLRL 393
C PSN ++D EI++++
Sbjct: 2136 CGPSNKSVDVVAEILMKM 2153
Score = 37 (18.1 bits), Expect = 1.0e-19, Sum P(5) = 1.0e-19
Identities = 8/17 (47%), Positives = 9/17 (52%)
Query: 319 LPMHEKYNHWGRASP-W 334
LP +KY H G S W
Sbjct: 1848 LPSKDKYKHAGEYSKVW 1864
>UNIPROTKB|P38935 [details] [associations]
symbol:IGHMBP2 "DNA-binding protein SMUBP-2" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008219 "cell death" evidence=IEA] [GO:0006412
"translation" evidence=NAS] [GO:0030529 "ribonucleoprotein complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000049 "tRNA binding" evidence=IDA] [GO:0032797
"SMN complex" evidence=IDA] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IDA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IDA] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003723
"RNA binding" evidence=IDA] [GO:0032575 "ATP-dependent 5'-3' RNA
helicase activity" evidence=IDA] [GO:0043141 "ATP-dependent 5'-3'
DNA helicase activity" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IDA] [GO:0030424 "axon" evidence=ISS] [GO:0030426 "growth
cone" evidence=ISS] [GO:0043022 "ribosome binding" evidence=IDA]
[GO:0003678 "DNA helicase activity" evidence=TAS] [GO:0003697
"single-stranded DNA binding" evidence=TAS] [GO:0006260 "DNA
replication" evidence=TAS] [GO:0006281 "DNA repair" evidence=TAS]
[GO:0006310 "DNA recombination" evidence=TAS] [GO:0051260 "protein
homooligomerization" evidence=IPI] [GO:0032508 "DNA duplex
unwinding" evidence=TAS] InterPro:IPR000058 InterPro:IPR001374
InterPro:IPR003593 InterPro:IPR004483 InterPro:IPR026853
Pfam:PF01424 Pfam:PF01428 PROSITE:PS51039 PROSITE:PS51061
SMART:SM00154 SMART:SM00382 SMART:SM00393 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0006412
GO:GO:0006260 GO:GO:0008219 GO:GO:0030424 GO:GO:0008270
GO:GO:0006281 GO:GO:0051260 GO:GO:0006351 GO:GO:0043022
GO:GO:0000122 GO:GO:0030426 GO:GO:0006310 GO:GO:0003697
GO:GO:0030529 GO:GO:0000049 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 GO:GO:0043141 HOGENOM:HOG000185831 TIGRFAMs:TIGR00376
Orphanet:98920 EMBL:AP000808 Gene3D:4.10.1110.10 GO:GO:0032575
EMBL:L14754 EMBL:L24544 EMBL:BC025299 EMBL:M64979 IPI:IPI00009379
PIR:A47500 RefSeq:NP_002171.2 UniGene:Hs.503048 PDB:1MSZ PDB:2LRR
PDB:4B3F PDB:4B3G PDBsum:1MSZ PDBsum:2LRR PDBsum:4B3F PDBsum:4B3G
ProteinModelPortal:P38935 SMR:P38935 IntAct:P38935 STRING:P38935
PhosphoSite:P38935 DMDM:229462778 PaxDb:P38935 PRIDE:P38935
Ensembl:ENST00000255078 GeneID:3508 KEGG:hsa:3508 UCSC:uc001ook.1
CTD:3508 GeneCards:GC11P068671 H-InvDB:HIX0009884
H-InvDB:HIX0171377 HGNC:HGNC:5542 MIM:600502 MIM:604320
neXtProt:NX_P38935 PharmGKB:PA29731 HOVERGEN:HBG077019
InParanoid:P38935 OMA:HARQRIS OrthoDB:EOG4GHZNJ PhylomeDB:P38935
EvolutionaryTrace:P38935 GenomeRNAi:3508 NextBio:13764
ArrayExpress:P38935 Bgee:P38935 CleanEx:HS_IGHMBP2
Genevestigator:P38935 GermOnline:ENSG00000132740
PANTHER:PTHR10887:SF23 Uniprot:P38935
Length = 993
Score = 281 (104.0 bits), Expect = 3.1e-24, Sum P(2) = 3.1e-24
Identities = 96/310 (30%), Positives = 143/310 (46%)
Query: 449 KDRD--SIRSAILNEAVIVCSTLSFSGSALLSKLNHG-FDVVIIDEAAQAVEPATLVPLA 505
K+R+ ++ ++ + V++ + S L L FDVV+IDE AQA+E + +PL
Sbjct: 331 KEREEAAMLESLTSANVVLATNTGASADGPLKLLPESYFDVVVIDECAQALEASCWIPLL 390
Query: 506 TGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRL--QRAGYPVKMLKTQYRMHPEVR 563
K + L GD QLP T +S A G SL +RL + V+ L QYRMH +
Sbjct: 391 KARKCI-LAGDHKQLPPTTVSHKAALAGLSLSLMERLAEEYGARVVRTLTVQYRMHQAIM 449
Query: 564 SFPSREFYDEALEDGSDVEDYTTRDWHEYRCF---G-PFSFFD-----IHEGKESQPAGS 614
+ S Y L S V + RD G P D + E +E
Sbjct: 450 RWASDTMYLGQLTAHSSVARHLLRDLPGVAATEETGVPLLLVDTAGCGLFELEEEDEQSK 509
Query: 615 GSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKV 674
G N EV V L L+ + +A++SPY QV ++ V
Sbjct: 510 G---NPGEVRLVSLHIQALVDAGVPARD---IAVVSPYNLQVDLLRQSL-----VHRHPE 558
Query: 675 VDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLR 734
++I +VDG QGREK+ I S VR++ K +GFLA+ RR+NV +TRA+ + V+ + T+
Sbjct: 559 LEIKSVDGFQGREKEAVILSFVRSNRKGEVGFLAEDRRINVAVTRARRHVAVICDSRTVN 618
Query: 735 EDKHWNNLVK 744
LV+
Sbjct: 619 NHAFLKTLVE 628
Score = 84 (34.6 bits), Expect = 3.1e-24, Sum P(2) = 3.1e-24
Identities = 16/36 (44%), Positives = 24/36 (66%)
Query: 258 NASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLL 293
+ SQ EA+ L +K +I GPPGTGKT T++ ++
Sbjct: 193 DTSQKEAVLFALSQKELAIIHGPPGTGKTTTVVEII 228
>ZFIN|ZDB-GENE-070912-617 [details] [associations]
symbol:si:dkey-97a13.6 "si:dkey-97a13.6"
species:7955 "Danio rerio" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004540 "ribonuclease activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001900 InterPro:IPR003593 InterPro:IPR026855
Pfam:PF00773 SMART:SM00382 SMART:SM00955 ZFIN:ZDB-GENE-070912-617
GO:GO:0005524 GO:GO:0003723 GO:GO:0004386 GO:GO:0004540
PANTHER:PTHR10887:SF16 GeneTree:ENSGT00550000074391 EMBL:BX663525
IPI:IPI00499390 RefSeq:XP_699251.2 UniGene:Dr.89869
Ensembl:ENSDART00000017829 GeneID:570654 KEGG:dre:570654
NextBio:20890238 Uniprot:E7F3B1
Length = 2781
Score = 281 (104.0 bits), Expect = 5.3e-24, Sum P(3) = 5.3e-24
Identities = 99/311 (31%), Positives = 152/311 (48%)
Query: 463 VIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLAT-GCKQVFLVGDPVQLP 521
+I+C T + + S L K + +IDE A A EP TLVPL + ++V L+GD QL
Sbjct: 2471 IILC-TCTAAASPNLKKTLSARQI-LIDECAMATEPQTLVPLVSFKPEKVVLLGDHKQLR 2528
Query: 522 ATVISPVAEHLGYGTSLFKR-LQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALE---- 576
V + LG SLF+R + RA ML TQYRMH E+ FPS +Y++ L+
Sbjct: 2529 PIVKNNHVRRLGMTRSLFERYMDRA----IMLDTQYRMHEEICKFPSEAYYNDMLKTVVR 2584
Query: 577 DGSDVEDYTTRDWHEYR--CFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLI 634
+ + V + T + + FG +I + S N DEV + + +L+
Sbjct: 2585 ERTSVLNAETEGRRQSKRILFGDIRGEEIGLVVSTARGNENSKANFDEVKKAVEICIQLV 2644
Query: 635 SMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFS 694
++ +++ +AI+SPY QV Q +ER + F + K +TT+ QG E I S
Sbjct: 2645 TV-GRVRPED-IAILSPYNAQVAQIRERLSD-FEL---KGFTVTTITKSQGSEWQYVILS 2698
Query: 695 CVRA--SDK-----------KSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNN 741
VR+ SD+ K IGF+ D ++NVGITRA+ + ++G + L W
Sbjct: 2699 IVRSCPSDEIEPMPSREWLSKHIGFVGDENQINVGITRAQVGLCILGNQAVLNCSPAWQK 2758
Query: 742 LVKSAEKQDCL 752
L+K C+
Sbjct: 2759 LLKHYSGHGCV 2769
Score = 164 (62.8 bits), Expect = 6.5e-06, Sum P(3) = 6.5e-06
Identities = 83/302 (27%), Positives = 128/302 (42%)
Query: 455 RSAILNEAVIVCSTLSFSGSALLSKLNHGFDV-VIIDEAAQAVEPATLVPLATGCK--QV 511
RS + + +I+ +T S + KL GF ++IDEA+Q +E L+ L K +V
Sbjct: 652 RSDLESHRIIITTT-SIARHLHELKLPKGFFTHILIDEASQMLEGEALMALGLADKHTRV 710
Query: 512 FLVGDPVQLPATVISPVAEHLGYGTSLFKRL------QRAGYPVK---MLKTQYRMHPEV 562
L GD +Q+ + S + T L RL Q K + YR E+
Sbjct: 711 VLAGDHMQMAPKLFSVTDDKRSEHT-LLNRLFHYYQDQSINIAKKSRIIFNENYRSTTEI 769
Query: 563 RSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIH-EGKESQPAGSGSWINID 621
F S FY + DG D H + P F + E S S SW+N
Sbjct: 770 VDFVSTYFY---VSDGIKARG----DVHPHPRLKPLIFHHVRGECHLSSTITSTSWLNYA 822
Query: 622 EVDFVLLLFHKLISMYPQL---KSSSQLAIISPYRHQVK-QFQERFKETFGVESQKVVDI 677
EV+ V+ + L++ +P K Q+ ++S + + R K +GV Q + +I
Sbjct: 823 EVNSVVNMVQVLLTDWPMEWGDKDPKQICVLSEGQQVAAIRIHLRRKGFYGVSVQNLANI 882
Query: 678 TTVDGCQGREKDVAIFSCVRASDK-----KSIG-FLADYRRMNVGITRAKSSILVVGCAS 731
QG++ V I + V DK S F D R +N +TRA+S ++V+G A
Sbjct: 883 ------QGKQFRVIIITTVHTRDKLLQLDSSCPEFFDDIRALNTALTRAQSLVVVIGDAG 936
Query: 732 TL 733
L
Sbjct: 937 AL 938
Score = 96 (38.9 bits), Expect = 5.3e-24, Sum P(3) = 5.3e-24
Identities = 60/242 (24%), Positives = 96/242 (39%)
Query: 55 KDTYKDVDDYLATFEPLLFEEVKAQIIQKKDEEEVQEWKLRLVMECGEADG-FHLPSVTY 113
K +Y +V++Y+ + PL E A + D ++ + + + G F LP
Sbjct: 2089 KGSYSNVEEYVQIWRPLCEMESAATAVDDSDCVVIEN--VAITWDDSRLSGNFSLPEENI 2146
Query: 114 EADEVESISPNDLLLLSKEEFK----EGSTFPTTYAFALVEHCQANLLRLRMYLAGEVIH 169
+ +E LL + K + + E S Y F V H L +G
Sbjct: 2147 KKWAIEFDLGRCLLCIRKRDLEQNQAEQSELDPKY-FTWVAHAVTTLCSDSPENSGNKFK 2205
Query: 170 INKDAVK--SQRLLNIHSLITSSVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDL 227
I VK S ++ T +V + K L ++ S + A V ++ K
Sbjct: 2206 IINFNVKYASMKIPKFKRNETFTVEIIPKLLPDIR--KESAVNNLKGANELVQNIALKHR 2263
Query: 228 ILSASEKSSGSQDQSWKIPGLLHEYIKENH---NASQLEAIHEGLLRKAFVLIQGPPGTG 284
I++ S +QD + L+ E N SQ +A+ + L K F +IQGPPGTG
Sbjct: 2264 IVN----QSSNQDVPLYL--LMREEAPAGLPQLNESQFKALEKALNGK-FTIIQGPPGTG 2316
Query: 285 KT 286
KT
Sbjct: 2317 KT 2318
Score = 51 (23.0 bits), Expect = 2.3e-19, Sum P(3) = 2.3e-19
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 275 VLIQGPPGTGKTQTILGLLSAILHATPARV 304
+LI GP GTGKT + + H + +V
Sbjct: 555 LLIYGPFGTGKTLCLASAAKELAHRSQNKV 584
Score = 48 (22.0 bits), Expect = 5.3e-24, Sum P(3) = 5.3e-24
Identities = 10/29 (34%), Positives = 17/29 (58%)
Query: 379 CAPSNSALDEIVLRLLNTGIRDENIRSYT 407
C PSN ++D + LL G + + +R Y+
Sbjct: 2354 CGPSNKSVDVVAEYLLKFGEKLKLLRVYS 2382
Score = 41 (19.5 bits), Expect = 1.4e-18, Sum P(2) = 1.4e-18
Identities = 14/64 (21%), Positives = 32/64 (50%)
Query: 399 RDENIRSYTPKIVRI-GLKAHHSVNSVAIDHLVEQKRDDSAADKQKHGATRKDRDSIRSA 457
RD + +P+ + L+ H +++ I HL+ Q++ A K++ + ++ S +
Sbjct: 92 RDRCTFASSPEEAAVWNLQKHTNLDHRTIIHLITQRKR-RAESKKEAQPSFQELSSYQEK 150
Query: 458 ILNE 461
+L E
Sbjct: 151 LLEE 154
Score = 38 (18.4 bits), Expect = 2.9e-18, Sum P(2) = 2.9e-18
Identities = 18/69 (26%), Positives = 25/69 (36%)
Query: 190 SVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLL 249
SV V + L LK + R Y + P+ L S KS + + L
Sbjct: 2360 SVDVVAEYL--LKFGEKLKLLRVYSRQMEMQEYPYPGSNLQLSHKSRQERSKPELRAITL 2417
Query: 250 HEYIKENHN 258
H I+ HN
Sbjct: 2418 HHRIRMGHN 2426
Score = 37 (18.1 bits), Expect = 6.5e-06, Sum P(3) = 6.5e-06
Identities = 10/42 (23%), Positives = 22/42 (52%)
Query: 743 VKSAEKQDCLFRVSKPYASFFSDENLESMRKNATTDNVQGAD 784
VK A + F+ ++ + + L +RK + +N++GA+
Sbjct: 2211 VKYASMKIPKFKRNETFTVEIIPKLLPDIRKESAVNNLKGAN 2252
>TAIR|locus:2200996 [details] [associations]
symbol:SDE3 "SILENCING DEFECTIVE" species:3702
"Arabidopsis thaliana" [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0009616
"virus induced gene silencing" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0035194 "posttranscriptional gene
silencing by RNA" evidence=IMP] InterPro:IPR026127 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0005737
eggNOG:COG1112 EMBL:AC005106 GO:GO:0003724 GO:GO:0035194
GO:GO:0009616 HOGENOM:HOG000239755 EMBL:AF339908 EMBL:AK117698
IPI:IPI00521883 PIR:C86189 RefSeq:NP_172037.1 UniGene:At.15329
UniGene:At.42398 ProteinModelPortal:Q8GYD9 SMR:Q8GYD9 STRING:Q8GYD9
PaxDb:Q8GYD9 PRIDE:Q8GYD9 EnsemblPlants:AT1G05460.1 GeneID:837047
KEGG:ath:AT1G05460 GeneFarm:2423 TAIR:At1g05460 InParanoid:Q8GYD9
OMA:DEREGNN PhylomeDB:Q8GYD9 ProtClustDB:CLSN2682016
Genevestigator:Q8GYD9 GermOnline:AT1G05460 PANTHER:PTHR10887:SF165
Uniprot:Q8GYD9
Length = 1002
Score = 307 (113.1 bits), Expect = 7.6e-24, Sum P(3) = 7.6e-24
Identities = 96/302 (31%), Positives = 150/302 (49%)
Query: 464 IVCSTLSFSGSALLSK-LNHG-FDVVIIDEAAQAVEPATLVPLATGCKQ---VFLVGDPV 518
+V ST S S L ++ +N G F +++DEA QA EP ++ ++ C V L GDP
Sbjct: 518 LVVSTY-MSASLLNAEGVNRGHFTHILLDEAGQASEPENMIAVSNLCLTETVVVLAGDPR 576
Query: 519 QLPATVISPVAEHLGYGTSLFKRLQRA--------GYPVKMLKTQYRMHPEVRSFPSREF 570
QL + S AE LG G S +RL Y K++K YR HPE+ PS+ F
Sbjct: 577 QLGPVIYSRDAESLGLGKSYLERLFECDYYCEGDENYVTKLVKN-YRCHPEILDLPSKLF 635
Query: 571 YD-EALEDGSDVEDY-TTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLL 628
YD E + D + + ++ + F P F+ I +G + + + SW N E+ V+
Sbjct: 636 YDGELVASKEDTDSVLASLNFLPNKEF-PMVFYGI-QGCDEREGNNPSWFNRIEISKVIE 693
Query: 629 LFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREK 688
+L + + +I+PYR QV + KE V + +V+ QG+EK
Sbjct: 694 TIKRLTAN--DCVQEEDIGVITPYRQQVM----KIKEVLDRLDMTEVKVGSVEQFQGQEK 747
Query: 689 DVAIFSCVRASDKKS-------IGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNN 741
V I S VR++ K + +GFL++ RR NV ITRA S ++++G + +D +WN
Sbjct: 748 QVIIISTVRSTIKHNEFDRAYCLGFLSNPRRFNVAITRAISLLVIIGNPHIICKDMNWNK 807
Query: 742 LV 743
L+
Sbjct: 808 LL 809
Score = 61 (26.5 bits), Expect = 7.6e-24, Sum P(3) = 7.6e-24
Identities = 16/35 (45%), Positives = 21/35 (60%)
Query: 258 NASQLEAIHEGLLRKAF--VLIQGPPGTGKTQTIL 290
NA Q+ +I L K +I GPPGTGKT T++
Sbjct: 398 NAEQICSIEMVLGCKGAPPYVIHGPPGTGKTMTLV 432
Score = 37 (18.1 bits), Expect = 7.6e-24, Sum P(3) = 7.6e-24
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 733 LREDKHWNNLVKSAEKQDC 751
+R D WNN EK++C
Sbjct: 947 VRSDG-WNNNGGKNEKEEC 964
>RGD|1306056 [details] [associations]
symbol:Pric285 "peroxisomal proliferator-activated receptor A
interacting complex 285" species:10116 "Rattus norvegicus"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0004540 "ribonuclease activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030374
"ligand-dependent nuclear receptor transcription coactivator
activity" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR001900 InterPro:IPR003593 InterPro:IPR026855
Pfam:PF00773 SMART:SM00382 SMART:SM00955 RGD:1306056 GO:GO:0005524
GO:GO:0003723 GO:GO:0004386 GO:GO:0004540 PANTHER:PTHR10887:SF16
GeneTree:ENSGT00550000074391 IPI:IPI00567928 RefSeq:XP_001057758.2
RefSeq:XP_230961.5 UniGene:Rn.47450 ProteinModelPortal:D4ADC2
Ensembl:ENSRNOT00000017787 GeneID:296474 KEGG:rno:296474
UCSC:RGD:1306056 CTD:296474 OrthoDB:EOG4Q84WM NextBio:641262
ArrayExpress:D4ADC2 Uniprot:D4ADC2
Length = 2944
Score = 295 (108.9 bits), Expect = 1.4e-23, Sum P(3) = 1.4e-23
Identities = 114/382 (29%), Positives = 177/382 (46%)
Query: 404 RSYTPKIVRIGLKAHHSVNSVAIDHLVEQKRDDSAADKQKHGATRKD-----RDS--IRS 456
RS KI + G + + S+ S+ + H + Q + AA+ +K A ++ +D +
Sbjct: 2557 RSLFGKISQEG-RPNQSLRSITLHHRIRQAPNPYAAEIRKFDAQLREGKIFSKDDLLVYR 2615
Query: 457 AILNEA---------VIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATG 507
+L +A VI+C T S + S L LN ++IDEA A EP TL+PL
Sbjct: 2616 RVLGKARKYELERHSVILC-TCSCAASGSLKALN--VRQILIDEAGMATEPETLIPLVCF 2672
Query: 508 CK--QVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSF 565
K +V L+GD QL V + +LG SLF+R R ML TQYRMH ++ SF
Sbjct: 2673 SKTEKVVLLGDHKQLRPVVKNEQLRNLGMDRSLFERYHRDAI---MLDTQYRMHKDICSF 2729
Query: 566 PSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDI--HEGK---ESQPAGSGSWINI 620
PS EFY L+ SD++ + H + P F + +E K ++ S N
Sbjct: 2730 PSMEFYGGKLKTWSDLKRPPSLLGHVGKQSCPVIFGSVQGYEQKLLVSTEEGNENSRANP 2789
Query: 621 DEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTV 680
+EV V+ + +L + +A+++PY Q + GV V IT
Sbjct: 2790 EEVTEVVRIIKQLT--LDRTVDPKDVAVLTPYNAQAAAISRGLMQR-GVTGVTVTSITKS 2846
Query: 681 DGCQGREKDVA-IFSCVRAS-D--------KKSIGFLADYRRMNVGITRAKSSILVVGCA 730
G + R V+ + +C R+ D KK +GF+ D ++NV ITRA+ + ++G
Sbjct: 2847 QGSEWRYVIVSTVRTCPRSDMDQRPTKSWLKKFLGFVVDPHQVNVAITRAQEGLCIIGDH 2906
Query: 731 STLREDKHWNNLVKSAEKQDCL 752
LR W+ L+ E Q+ L
Sbjct: 2907 LLLRCCPLWHRLLGFCEAQNSL 2928
Score = 86 (35.3 bits), Expect = 1.4e-23, Sum P(3) = 1.4e-23
Identities = 21/46 (45%), Positives = 29/46 (63%)
Query: 241 QSWKIPGLLHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKT 286
+++ IPG H+ N SQ +A+ L +K F +IQGPPGTGKT
Sbjct: 2436 KNYNIPGGHHKL-----NQSQDKAVRSAL-QKQFTVIQGPPGTGKT 2475
Score = 50 (22.7 bits), Expect = 7.2e-20, Sum P(3) = 7.2e-20
Identities = 10/15 (66%), Positives = 12/15 (80%)
Query: 275 VLIQGPPGTGKTQTI 289
+LI GP GTGKT T+
Sbjct: 785 LLIYGPFGTGKTYTL 799
Score = 40 (19.1 bits), Expect = 1.4e-23, Sum P(3) = 1.4e-23
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 81 IQKKDEEEVQEWKLRLV-MECGEADGFHLPSVTYEA 115
I+ ++E+QEW R ME E + V Y+A
Sbjct: 350 IKAHSKQELQEWVQRAQDMELREQAAWQDGLVPYQA 385
>ZFIN|ZDB-GENE-090313-71 [details] [associations]
symbol:dna2 "DNA replication helicase 2 homolog
(yeast)" species:7955 "Danio rerio" [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA;ISS] [GO:0033567 "DNA
replication, Okazaki fragment processing" evidence=IEA] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=IEA]
[GO:0006264 "mitochondrial DNA replication" evidence=ISS]
[GO:0043137 "DNA replication, removal of RNA primer" evidence=ISS]
[GO:0016890 "site-specific endodeoxyribonuclease activity, specific
for altered base" evidence=ISS] [GO:0005760 "gamma DNA polymerase
complex" evidence=ISS] [GO:0006284 "base-excision repair"
evidence=ISS] [GO:0045740 "positive regulation of DNA replication"
evidence=ISS] InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696
ZFIN:ZDB-GENE-090313-71 GO:GO:0017108 GO:GO:0043142 GO:GO:0033567
PANTHER:PTHR10887:SF14 GeneTree:ENSGT00550000074852 EMBL:BX530068
IPI:IPI00901582 Ensembl:ENSDART00000109798 ArrayExpress:F1Q892
Bgee:F1Q892 Uniprot:F1Q892
Length = 1378
Score = 171 (65.3 bits), Expect = 2.6e-23, Sum P(3) = 2.6e-23
Identities = 40/108 (37%), Positives = 66/108 (61%)
Query: 646 LAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIG 705
+ +I+PYR Q+K + G ++ K +++ TVD QGR+K V I S VR++ + ++G
Sbjct: 1255 IGVIAPYRQQLKVISSLLQ---G-DAFKALEVNTVDKYQGRDKSVIIVSFVRSNAEGNLG 1310
Query: 706 -FLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
L D+RR+NV ITRAK +L++G A TLR L+ +++D +
Sbjct: 1311 ELLQDWRRLNVAITRAKHKLLMLGSAPTLRRYAPLEKLLCHLQQEDMI 1358
Score = 154 (59.3 bits), Expect = 2.6e-23, Sum P(3) = 2.6e-23
Identities = 40/97 (41%), Positives = 52/97 (53%)
Query: 484 FDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQ 543
FD I+DEA+Q +P + PL + V LVGD QLP V + A LG SLFKRL+
Sbjct: 1073 FDFCIVDEASQISQPVCIGPLFYAQRFV-LVGDHQQLPPIVQNAEARSLGMDESLFKRLE 1131
Query: 544 RAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSD 580
V L QYRM+ + S + Y+ LE GS+
Sbjct: 1132 HHRDAVVQLNVQYRMNSAIMSLSNALMYEGRLECGSE 1168
Score = 88 (36.0 bits), Expect = 2.6e-23, Sum P(3) = 2.6e-23
Identities = 22/42 (52%), Positives = 27/42 (64%)
Query: 258 NASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHA 299
N Q +A+ + LL K + LI G PGTGKT TI L+ ILHA
Sbjct: 945 NKPQKQAMKKVLLSKDYTLIVGMPGTGKTTTICTLVR-ILHA 985
Score = 42 (19.8 bits), Expect = 1.4e-18, Sum P(3) = 1.4e-18
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 313 IKRGPELPMHEKYNHWGRAS 332
+K GP L M+EK N + + S
Sbjct: 205 LKAGPCLKMNEKLNGFSKDS 224
Score = 39 (18.8 bits), Expect = 2.9e-18, Sum P(3) = 2.9e-18
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 282 GTGKTQTILGLLSAILHATP 301
G G T LG LS ++ TP
Sbjct: 885 GAGGLSTHLGNLSMLMENTP 904
>MGI|MGI:2443732 [details] [associations]
symbol:Dna2 "DNA replication helicase 2 homolog (yeast)"
species:10090 "Mus musculus" [GO:0000076 "DNA replication
checkpoint" evidence=ISO] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000729 "DNA double-strand break processing"
evidence=ISO] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003678
"DNA helicase activity" evidence=ISO] [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0004518 "nuclease activity" evidence=ISO]
[GO:0004519 "endonuclease activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0006260 "DNA
replication" evidence=ISO] [GO:0006264 "mitochondrial DNA
replication" evidence=ISO] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006284 "base-excision repair" evidence=ISO] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0008152
"metabolic process" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016890 "site-specific endodeoxyribonuclease
activity, specific for altered base" evidence=ISO] [GO:0017108
"5'-flap endonuclease activity" evidence=ISO] [GO:0032508 "DNA
duplex unwinding" evidence=ISO] [GO:0033567 "DNA replication,
Okazaki fragment processing" evidence=ISO] [GO:0042645
"mitochondrial nucleoid" evidence=ISO] [GO:0043137 "DNA
replication, removal of RNA primer" evidence=ISO] [GO:0043139
"5'-3' DNA helicase activity" evidence=ISO] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=ISO]
[GO:0043504 "mitochondrial DNA repair" evidence=ISO] [GO:0045740
"positive regulation of DNA replication" evidence=ISO] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051536 "iron-sulfur cluster
binding" evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster
binding" evidence=IEA] InterPro:IPR026851 InterPro:IPR014808
MGI:MGI:2443732 Pfam:PF08696 GO:GO:0005524 GO:GO:0005634
GO:GO:0046872 GO:GO:0006284 GO:GO:0003677 GO:GO:0051539
GO:GO:0042645 GO:GO:0016890 eggNOG:COG1112 GO:GO:0045740
GO:GO:0000729 GO:GO:0017108 GO:GO:0000076 GO:GO:0043137
GO:GO:0005760 GO:GO:0043139 GO:GO:0043142 GO:GO:0043504
GO:GO:0006264 PANTHER:PTHR10887:SF14 CTD:1763 HOGENOM:HOG000168456
HOVERGEN:HBG081456 KO:K10742 EMBL:AK129051 EMBL:AK028381
EMBL:BC025182 EMBL:BC115716 IPI:IPI00224915 IPI:IPI00816966
RefSeq:NP_796346.2 UniGene:Mm.21492 ProteinModelPortal:Q6ZQJ5
SMR:Q6ZQJ5 STRING:Q6ZQJ5 PaxDb:Q6ZQJ5 PRIDE:Q6ZQJ5
Ensembl:ENSMUST00000092462 Ensembl:ENSMUST00000131422 GeneID:327762
KEGG:mmu:327762 UCSC:uc007fji.2 UCSC:uc007fjj.2
GeneTree:ENSGT00550000074852 InParanoid:Q6ZQJ5 OMA:EHESLCH
ChiTaRS:DNA2 NextBio:397947 Bgee:Q6ZQJ5 CleanEx:MM_DNA2
Genevestigator:Q6ZQJ5 GermOnline:ENSMUSG00000036875 Uniprot:Q6ZQJ5
Length = 1062
Score = 172 (65.6 bits), Expect = 2.6e-23, Sum P(4) = 2.6e-23
Identities = 47/123 (38%), Positives = 64/123 (52%)
Query: 458 ILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDP 517
+ N IV +T + S+ FD I+DEA+Q +P L PL ++ LVGD
Sbjct: 733 LYNSHPIVATTCMGINHPIFSRKT--FDFCIVDEASQISQPVCLGPLFFS-RRFVLVGDH 789
Query: 518 VQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALED 577
QLP V++ A LG SLFKRL+R V L QYRM+ ++ S ++ Y LE
Sbjct: 790 QQLPPLVVNREARALGMSESLFKRLERNESAVVQLTVQYRMNRKIMSLSNKLTYAGKLEC 849
Query: 578 GSD 580
GSD
Sbjct: 850 GSD 852
Score = 163 (62.4 bits), Expect = 2.6e-23, Sum P(4) = 2.6e-23
Identities = 40/139 (28%), Positives = 74/139 (53%)
Query: 597 PFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQV 656
P F + + + +G N+ E ++ L I S S + +I+PYR Q+
Sbjct: 892 PVCFLNTDKVPAPEQVENGGVSNVTEARLIVFLTSTFIKAGC---SPSDIGVIAPYRQQL 948
Query: 657 KQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIG-FLADYRRMNV 715
+ + + S +V++ TVD QGR+K + + S VR+++ ++G L D+RR+NV
Sbjct: 949 RIISDLLARS----SVGMVEVNTVDKYQGRDKSLILVSFVRSNEDGTLGELLKDWRRLNV 1004
Query: 716 GITRAKSSILVVGCASTLR 734
+TRAK ++++G S+L+
Sbjct: 1005 ALTRAKHKLILLGSVSSLK 1023
Score = 80 (33.2 bits), Expect = 2.6e-23, Sum P(4) = 2.6e-23
Identities = 21/42 (50%), Positives = 25/42 (59%)
Query: 258 NASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHA 299
N Q +A+ LL K + LI G PGTGKT TI L+ IL A
Sbjct: 628 NKPQRQAMKRVLLSKDYTLIVGMPGTGKTTTICALVR-ILSA 668
Score = 39 (18.8 bits), Expect = 7.0e-10, Sum P(4) = 7.0e-10
Identities = 8/30 (26%), Positives = 17/30 (56%)
Query: 542 LQRAGYPVKMLKT--QYRMHPEVRSFPSRE 569
L+ A + V L+ +++HP+++ F E
Sbjct: 688 LKLAKFKVGFLRLGQSHKVHPDIQKFTEEE 717
Score = 38 (18.4 bits), Expect = 2.6e-23, Sum P(4) = 2.6e-23
Identities = 7/14 (50%), Positives = 11/14 (78%)
Query: 156 LLRLRMYLAGEVIH 169
LL+LR +LA ++H
Sbjct: 355 LLKLRNWLAASLLH 368
Score = 38 (18.4 bits), Expect = 8.8e-10, Sum P(4) = 8.8e-10
Identities = 7/12 (58%), Positives = 7/12 (58%)
Query: 332 SPWLVGANPRDN 343
SPWL G DN
Sbjct: 880 SPWLAGVLEPDN 891
>WB|WBGene00016566 [details] [associations]
symbol:eri-7 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0019079 "viral
genome replication" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000003 "reproduction" evidence=IMP]
InterPro:IPR003593 SMART:SM00382 GO:GO:0000166 GO:GO:0000003
GO:GO:0017111 InterPro:IPR014001 SMART:SM00487 EMBL:FO080509
GeneTree:ENSGT00700000104572 PIR:T28788 RefSeq:NP_491374.2
ProteinModelPortal:O01976 SMR:O01976 EnsemblMetazoa:C41D11.7
GeneID:172047 KEGG:cel:CELE_C41D11.7 UCSC:C41D11.7.1 CTD:172047
WormBase:C41D11.7 InParanoid:O01976 OMA:NDEEMIN NextBio:873807
ArrayExpress:O01976 Uniprot:O01976
Length = 625
Score = 180 (68.4 bits), Expect = 4.4e-23, Sum P(3) = 4.4e-23
Identities = 71/249 (28%), Positives = 122/249 (48%)
Query: 558 MHPEVRSFPSREFYDE-ALEDGSDVEDYTTR-DWHEYRCFGPFSFFDIHEGKESQPAGSG 615
++P+ + F R +D L D S D R + +E+ F S I++ K+
Sbjct: 339 LNPQPKKF--RNLFDPLVLIDTSLERDVEKRLETYEHAVFDTNS---INKTKQGF----- 388
Query: 616 SWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVES--QK 673
S+ N+ E + + +L+ Q S +AII+PY+ Q + E FG E+
Sbjct: 389 SYANLAEAKIAIGHYQRLLKYGVQ---PSDIAIITPYKGQTS-LVTKLMEEFGAETGYTD 444
Query: 674 VVDIT--TVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCAS 731
V T TVD QG+E +V IF+ VR++ +K++GF+++ RR+NV ITRAK + +G
Sbjct: 445 FVQTTIGTVDSVQGKEYEVVIFTMVRSNPRKTMGFVSELRRLNVVITRAKRHFMFIGNGY 504
Query: 732 TLREDKHWNNLVKSAEKQDCLFRVSK----PYASFFSDENLESMRKNATTDNVQGADGHV 787
L E K + + K DC F+ +K P +F D N+ N +++ +
Sbjct: 505 LLAESKK-DEIRKL---YDC-FKNAKRRFHPNNAFGEDGNVTDYVSNNFGQDLESFMNY- 558
Query: 788 PHDDETMHY 796
+D+E +++
Sbjct: 559 SNDEEMINW 567
Score = 144 (55.7 bits), Expect = 4.4e-23, Sum P(3) = 4.4e-23
Identities = 39/154 (25%), Positives = 76/154 (49%)
Query: 436 DSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFD--VVIIDEAA 493
++ D+ + + R+ + + ++ + +T+ S + K + FD + IIDEAA
Sbjct: 183 ENVLDEMRQSIINRVRNEVGAEVIGNVRVAFATIGASFVDFVMK-HKKFDPCLCIIDEAA 241
Query: 494 QAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRL--QRAGYPVKM 551
Q +E T P K++ + GDP QLPA V + A+ G S+ R+ ++ + M
Sbjct: 242 QVMEAQTW-PAVYKMKRIVMAGDPKQLPALVFTDEAKAFGLQNSVMDRILEKKNNFSWIM 300
Query: 552 LKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYT 585
L+ QYR + ++ ++ + FY L+ +Y+
Sbjct: 301 LENQYRSNAKIATWSNTCFYHNQLKTDVKCHEYS 334
Score = 73 (30.8 bits), Expect = 4.4e-23, Sum P(3) = 4.4e-23
Identities = 19/41 (46%), Positives = 23/41 (56%)
Query: 258 NASQLEAIHEGLLR-KAFVLIQGPPGTGKTQTILGLLSAIL 297
N Q AI L + V IQGPPGTGKT T+ LL ++
Sbjct: 67 NEKQRTAIKMALNENRKLVCIQGPPGTGKTFTLTLLLCRLI 107
Score = 45 (20.9 bits), Expect = 3.4e-20, Sum P(3) = 3.4e-20
Identities = 17/56 (30%), Positives = 28/56 (50%)
Query: 32 ESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKAQIIQKKDEE 87
++ E D +K DR + EV+D K D+ T E +L +E++ II + E
Sbjct: 148 DTNEYRDVINKS-DRALMAAEEVRDLRKAFDNGEIT-ENVL-DEMRQSIINRVRNE 200
>UNIPROTKB|Q4S102 [details] [associations]
symbol:GSTENG00025786001 "Chromosome 5 SCAF14773, whole
genome shotgun sequence." species:99883 "Tetraodon nigroviridis"
[GO:0006264 "mitochondrial DNA replication" evidence=ISS]
[GO:0006284 "base-excision repair" evidence=ISS] [GO:0016890
"site-specific endodeoxyribonuclease activity, specific for altered
base" evidence=ISS] [GO:0017108 "5'-flap endonuclease activity"
evidence=ISS] [GO:0043137 "DNA replication, removal of RNA primer"
evidence=ISS] [GO:0045740 "positive regulation of DNA replication"
evidence=ISS] [GO:0005760 "gamma DNA polymerase complex"
evidence=ISS] InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696
GO:GO:0006284 GO:GO:0016890 eggNOG:COG1112 GO:GO:0045740
GO:GO:0017108 GO:GO:0043137 GO:GO:0043142 GO:GO:0006264
PANTHER:PTHR10887:SF14 HOVERGEN:HBG081456 EMBL:CAAE01014773
ProteinModelPortal:Q4S102 STRING:Q4S102 Uniprot:Q4S102
Length = 1043
Score = 267 (99.0 bits), Expect = 4.7e-23, Sum P(2) = 4.7e-23
Identities = 86/289 (29%), Positives = 138/289 (47%)
Query: 484 FDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQ 543
FD I+DEA+Q +P + PL ++ LVGD QLP V + A LG SLFKRL+
Sbjct: 762 FDFCIVDEASQISQPVCVGPLFYA-RRFVLVGDHQQLPPIVQNQEARSLGMDESLFKRLE 820
Query: 544 RAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSD---------------VEDYTTRD 588
V L QYRM+ ++ S + Y+ LE GS+ + + +
Sbjct: 821 LHRDAVVQLNVQYRMNRQIMSLSNSLMYEGRLECGSERTATSLITLPLLPSVLPELGSLA 880
Query: 589 WHEYRCF--GPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSS-SQ 645
W + P F D + G N E L HKL+ + +
Sbjct: 881 WIQATLLPSNPVCFLDCSAVPALETVEQGGISNHTEA----ALIHKLLLLLIKAGCKPGD 936
Query: 646 LAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKS-I 704
+ +I+PYR Q++ + + + V++ TVD QGR+K + + S VR++ ++ +
Sbjct: 937 IGVIAPYRQQLRTISGLLQAS----AFTGVEVNTVDRYQGRDKSLILLSFVRSTAEEGPL 992
Query: 705 G-FLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
G L D+RR+NV ITRAKS +L++G A+TLR L+ ++++ +
Sbjct: 993 GELLKDWRRLNVAITRAKSKLLMLGSATTLRRYAPVEKLLNHLQRENLI 1041
Score = 88 (36.0 bits), Expect = 4.7e-23, Sum P(2) = 4.7e-23
Identities = 22/42 (52%), Positives = 27/42 (64%)
Query: 258 NASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHA 299
N Q +A+ + LL K + LI G PGTGKT TI L+ ILHA
Sbjct: 634 NKPQKQAMKKVLLSKDYTLIVGMPGTGKTTTICTLVR-ILHA 674
>ZFIN|ZDB-GENE-070424-144 [details] [associations]
symbol:si:ch211-183d5.1 "si:ch211-183d5.1"
species:7955 "Danio rerio" [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR026855 ZFIN:ZDB-GENE-070424-144
GO:GO:0004386 PANTHER:PTHR10887:SF16 GeneTree:ENSGT00550000074391
EMBL:AL935128 IPI:IPI00492493 Ensembl:ENSDART00000144897
Uniprot:F1QAI5
Length = 517
Score = 255 (94.8 bits), Expect = 6.5e-23, Sum P(3) = 6.5e-23
Identities = 97/316 (30%), Positives = 148/316 (46%)
Query: 463 VIVCSTLSFSGSALLSKLNHGFDV--VIIDEAAQAVEPATLVPLAT-GCKQVFLVGDPVQ 519
V++C T S SAL +L D ++IDE A A EP +PL + +Q+ L+GD Q
Sbjct: 181 VVLC-TCS---SALKPELREVMDFRQILIDECAMATEPEAFIPLVSHNPQQIVLLGDHQQ 236
Query: 520 LPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGS 579
+ V ++ G SLF+R ML TQYRMH E+ SFPS EFYD L+ G+
Sbjct: 237 IRPIVQCGHVKNKGMEKSLFERYMDLA---NMLDTQYRMHAEICSFPSDEFYDGKLKTGA 293
Query: 580 DVEDYTTRDWHEYRCFGPFSFFDIH-EGKE------SQPAGSGSWINIDEVDFVLLLFHK 632
+ + + P + H EGKE ++ S N +E + + +
Sbjct: 294 ERGPCCLLN----KSKEPTAMLFGHIEGKEVSLVVSTEKGNENSMANTEEAEQAVCVADL 349
Query: 633 LISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAI 692
LI S +AI++PY QV + K T ++ + V + TV QG E I
Sbjct: 350 LIKQSGV--SPEHIAILTPYNAQVSEI----KMTLEKKNVRNVTVCTVMKSQGSEWPYVI 403
Query: 693 FSCVRA---SD---------K----KSIGFLADYRRMNVGITRAKSSILVVGCASTLRED 736
S VR+ SD K K +GF+ D ++NV ITRA+ + ++G + LR
Sbjct: 404 VSTVRSCSTSDIQAYRVRPHKAWLGKRLGFVTDANQVNVAITRAQDGLCILGNSDLLRCC 463
Query: 737 KHWNNLVKSAEKQDCL 752
+ W+ L+ ++ C+
Sbjct: 464 ELWDRLLDHYYRKSCV 479
Score = 87 (35.7 bits), Expect = 6.5e-23, Sum P(3) = 6.5e-23
Identities = 18/35 (51%), Positives = 26/35 (74%)
Query: 258 NASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGL 292
N SQ +A+ E + +K F +IQGPPGTGKT ++G+
Sbjct: 2 NMSQKKAVKEAM-KKPFTVIQGPPGTGKT--VVGI 33
Score = 41 (19.5 bits), Expect = 6.5e-23, Sum P(3) = 6.5e-23
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 379 CAPSNSALDEIVLRLLN-TGI 398
C PSN ++D + +LL +G+
Sbjct: 70 CGPSNKSVDIVAEQLLKLSGV 90
Score = 37 (18.1 bits), Expect = 1.7e-22, Sum P(3) = 1.7e-22
Identities = 7/9 (77%), Positives = 8/9 (88%)
Query: 354 FPTTGNELK 362
FP TG+ELK
Sbjct: 106 FPYTGSELK 114
>POMBASE|SPBC16D10.04c [details] [associations]
symbol:dna2 "DNA replication endonuclease-helicase
Dna2" species:4896 "Schizosaccharomyces pombe" [GO:0000084 "S phase
of mitotic cell cycle" evidence=IC] [GO:0000723 "telomere
maintenance" evidence=IGI] [GO:0000784 "nuclear chromosome,
telomeric region" evidence=ISO] [GO:0004003 "ATP-dependent DNA
helicase activity" evidence=ISO] [GO:0004518 "nuclease activity"
evidence=IMP] [GO:0004527 "exonuclease activity" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=ISM] [GO:0005634 "nucleus" evidence=IC;IDA]
[GO:0005657 "replication fork" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006281 "DNA repair" evidence=ISS] [GO:0017108
"5'-flap endonuclease activity" evidence=ISO] [GO:0019901 "protein
kinase binding" evidence=IPI] [GO:0031573 "intra-S DNA damage
checkpoint" evidence=IMP] [GO:0031860 "telomeric 3' overhang
formation" evidence=IMP] [GO:0042162 "telomeric DNA binding"
evidence=IDA] [GO:0043137 "DNA replication, removal of RNA primer"
evidence=IMP] [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0043596 "nuclear replication fork"
evidence=IC] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
[GO:0071932 "replication fork reversal" evidence=IMP]
InterPro:IPR026851 PomBase:SPBC16D10.04c InterPro:IPR014808
Pfam:PF08696 GO:GO:0005829 GO:GO:0005524 GO:GO:0046872
EMBL:CU329671 GO:GO:0006281 GenomeReviews:CU329671_GR GO:GO:0051539
GO:GO:0043596 GO:GO:0004003 GO:GO:0004527 GO:GO:0000084
eggNOG:COG1112 GO:GO:0000784 GO:GO:0042162 GO:GO:0031573
GO:GO:0017108 GO:GO:0043137 GO:GO:0031860 GO:GO:0043142
PANTHER:PTHR10887:SF14 EMBL:AF144384 EMBL:AB028014 EMBL:AF075169
PIR:T39568 PIR:T47242 PIR:T51292 RefSeq:NP_596499.2 STRING:Q9URU2
GeneID:2540148 OrthoDB:EOG47H8Z4 NextBio:20801284 GO:GO:0071932
InterPro:IPR022765 Pfam:PF01930 Uniprot:Q9URU2
Length = 1397
Score = 284 (105.0 bits), Expect = 9.1e-23, Sum P(2) = 9.1e-23
Identities = 111/361 (30%), Positives = 171/361 (47%)
Query: 445 GATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPL 504
G T D S++ + ++ CS+L S + +K FD IIDEA+Q P L PL
Sbjct: 1023 GTTFDDLASLKHFYEDPQIVACSSLGVYHS-IFNKRK--FDYCIIDEASQIPLPICLGPL 1079
Query: 505 ATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYP--VKMLKTQYRMHPEV 562
K V LVGD QLP V + G SLFK L +P V L+ QYRM+ ++
Sbjct: 1080 QLAEKFV-LVGDHYQLPPLVKNSRTSKDGLSLSLFKLLSEK-HPEAVTTLRLQYRMNEDI 1137
Query: 563 RSFPSREFYDEALEDGSDVEDYTTRDWHE-YRCFG-PFSFFDIH-EGKESQPAGSGSWIN 619
S S Y L GS + + G P S +H K P+ S + N
Sbjct: 1138 NSLSSELIYGGNLVCGSKTISQKKLILPKAHLSDGLPDSSSSLHWVNKLINPSHSVIFFN 1197
Query: 620 IDEV-------DFVL------LLFHKLISMYPQ--LKSSSQLAIISPYRHQVKQFQERFK 664
D++ + +L L + +S + + +K SS + IIS Y+ QV+ + K
Sbjct: 1198 TDDILGVESKTNNILENHTEAFLIEQAVSSFLERGVKQSS-IGIISIYKSQVELLSKNLK 1256
Query: 665 ETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIG-FLADYRRMNVGITRAKSS 723
S ++I TVD QGR+KD+ + S VR++ K +G L D+ R+NV ++RAK
Sbjct: 1257 ------SFTEIEINTVDRYQGRDKDIILISFVRSNSKNLVGELLRDWHRLNVALSRAKVK 1310
Query: 724 ILVVGCASTLREDKHWNNLVKSAEKQDCLFRVSKPYASFFSDEN---LESMRKNATTDNV 780
++ G STL ++L+K EK +F +++ + DEN ++ + ATT+N
Sbjct: 1311 CIMFGSLSTLSSSNIVSHLLKLLEKNKWIFTLNENDIATKFDENSSPIKDCSQVATTNNA 1370
Query: 781 Q 781
+
Sbjct: 1371 K 1371
Score = 71 (30.1 bits), Expect = 9.1e-23, Sum P(2) = 9.1e-23
Identities = 16/40 (40%), Positives = 24/40 (60%)
Query: 258 NASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAIL 297
N Q+ A+ + + + LI G PGTGKT TI L+ ++L
Sbjct: 933 NEDQITALKKCHAAEHYSLILGMPGTGKTTTISSLIRSLL 972
>FB|FBgn0041164 [details] [associations]
symbol:armi "armitage" species:7227 "Drosophila melanogaster"
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=ISS;IMP] [GO:0007319 "negative
regulation of oskar mRNA translation" evidence=IMP] [GO:0000578
"embryonic axis specification" evidence=NAS;IMP] [GO:0016325
"oocyte microtubule cytoskeleton organization" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0007317 "regulation of
pole plasm oskar mRNA localization" evidence=IMP] [GO:0016246 "RNA
interference" evidence=IMP] [GO:0003678 "DNA helicase activity"
evidence=NAS] [GO:0030425 "dendrite" evidence=IDA] [GO:0043025
"neuronal cell body" evidence=IDA] [GO:0007616 "long-term memory"
evidence=IMP] [GO:0030424 "axon" evidence=IDA] [GO:0045202
"synapse" evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0046843 "dorsal appendage
formation" evidence=IMP] [GO:0007318 "pole plasm protein
localization" evidence=IMP] [GO:0070725 "Yb body" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] GO:GO:0005524
GO:GO:0005737 EMBL:AE014296 GO:GO:0016246 GO:GO:0000184
GO:GO:0030424 GO:GO:0043025 GO:GO:0030425 GO:GO:0007616
GO:GO:0045202 GO:GO:0007318 eggNOG:COG1112 EMBL:AY598469
RefSeq:NP_001014556.1 RefSeq:NP_647816.2 ProteinModelPortal:Q6J5K9
SMR:Q6J5K9 IntAct:Q6J5K9 STRING:Q6J5K9 PaxDb:Q6J5K9 GeneID:38427
KEGG:dme:Dmel_CG11513 UCSC:CG11513-RA CTD:38427 FlyBase:FBgn0041164
InParanoid:Q6J5K9 OMA:ITISTCT OrthoDB:EOG4DZ094 PhylomeDB:Q6J5K9
GenomeRNAi:38427 NextBio:808602 Bgee:Q6J5K9 GermOnline:CG11513
GO:GO:0070725 GO:GO:0003678 GO:GO:0046843 GO:GO:0031023
InterPro:IPR026122 PANTHER:PTHR10887:SF17 Uniprot:Q6J5K9
Length = 1274
Score = 207 (77.9 bits), Expect = 5.9e-22, Sum P(3) = 5.9e-22
Identities = 75/251 (29%), Positives = 120/251 (47%)
Query: 530 EHLGYGTSLFKRLQRAGY-PVKMLKT--QYRMHPEVRSFPSREFYDEALEDG-SDVEDYT 585
E Y L + + +GY P+ + K YR P + S SR FYD+ L S+ +
Sbjct: 1005 ERSPYRKDLQRFPESSGYNPLVLTKLLYNYRALPSIMSIYSRLFYDDELIPVLSEKDSRE 1064
Query: 586 TRDWHEYRCF-----------GPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLI 634
+R + RC G F F+ I G+ Q S SW N EV V L+ I
Sbjct: 1065 SRLLSKLRCVFESEKDIPQAHGTF-FYGII-GENRQNNDSPSWFNPQEVREVFLM---TI 1119
Query: 635 SMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFS 694
++Y ++ Q+ II+PY+ QVK + F T V K I +V+ QG+E+D+ + S
Sbjct: 1120 ALYRANVTADQIGIITPYQKQVKMLRSMFIGT-DVVMPK---IGSVEEFQGQERDIILIS 1175
Query: 695 CVRASD-------KKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAE 747
VR+S+ + S+GF+ +R+NV ++RA++ +++ G L D+ W L+
Sbjct: 1176 TVRSSEEILRMDARFSLGFVRCSKRLNVAVSRARAMMIIFGNPHLLAVDECWRQLILFCV 1235
Query: 748 KQDCLFRVSKP 758
K + F P
Sbjct: 1236 KNNAYFGCDLP 1246
Score = 122 (48.0 bits), Expect = 5.9e-22, Sum P(3) = 5.9e-22
Identities = 35/89 (39%), Positives = 47/89 (52%)
Query: 464 IVCSTLSFSGSALLSKLNHG-FDVVIIDEAAQAVEPATLVPLATGCK---QVFLVGDPVQ 519
I ST + G+ L G F V+ DEA Q EP T+VP+ K QV L GDP Q
Sbjct: 921 ITISTCTTLGNFLQLGFPAGHFTHVLFDEAGQCTEPETMVPIVMLTKKRSQVVLSGDPRQ 980
Query: 520 LPATVISPVAEHLGYGTSLFKRL-QRAGY 547
L + V S +A +G+ S +RL +R+ Y
Sbjct: 981 LQSIVTSRIASKMGFSISFLERLLERSPY 1009
Score = 68 (29.0 bits), Expect = 5.9e-22, Sum P(3) = 5.9e-22
Identities = 20/59 (33%), Positives = 33/59 (55%)
Query: 251 EYIKENHNASQLEAIHEGLLRKA----FVLIQGPPGTGKTQTILGLLSAILHATP-ARV 304
E+ ++ N+ Q A+ L +A +VL GPPG+GKT T++ L ++ P AR+
Sbjct: 778 EWYNQSLNSIQKRAVFNILRGEAENIPYVLF-GPPGSGKTMTLIETLLQLVRNLPGARI 835
>UNIPROTKB|F1RXR7 [details] [associations]
symbol:MOV10L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007283 "spermatogenesis" evidence=IEA] [GO:0007281
"germ cell development" evidence=IEA] GO:GO:0007283 GO:GO:0007281
GeneTree:ENSGT00550000074391 OMA:NMSGVTL InterPro:IPR026125
PANTHER:PTHR10887:SF6 EMBL:BX321913 Ensembl:ENSSSCT00000001066
Uniprot:F1RXR7
Length = 1211
Score = 187 (70.9 bits), Expect = 5.6e-21, Sum P(5) = 5.6e-21
Identities = 63/204 (30%), Positives = 102/204 (50%)
Query: 550 KMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR-DWHEYRCFG-PFSFFDIHEGK 607
K++K YR H + + PSR FY LE +D + T+ W + G P F + G
Sbjct: 965 KLVKN-YRSHSALLALPSRLFYHRELEVCADPKVVTSLLGWEKLPRKGFPLVFHGVR-GT 1022
Query: 608 ESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETF 667
E++ S SW N E V+ L S+ + +I+PYR QV++ + +
Sbjct: 1023 EAREGRSPSWFNPTEAVQVMRYCCLLARSVSSQVSAGDIGVITPYRKQVEKIKILLRNV- 1081
Query: 668 GVESQKVVDITTVDGCQGREKDVAIFSCVRAS------DKKSIGFLADYRRMNVGITRAK 721
G+ KV +V+ QG+E V I S VR++ D+ +GFL++ +R NV ITR K
Sbjct: 1082 GLAEVKV---GSVEEFQGQEYLVIIISTVRSNEDRFEDDRYFLGFLSNSKRFNVAITRPK 1138
Query: 722 SSILVVGCASTL-REDKHWNNLVK 744
+ ++V+G L R+D + L++
Sbjct: 1139 ALLIVLGNPHVLVRQDPCFGALLE 1162
Score = 110 (43.8 bits), Expect = 5.6e-21, Sum P(5) = 5.6e-21
Identities = 34/104 (32%), Positives = 48/104 (46%)
Query: 448 RKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATG 507
R D R++ + CS+ L ++ H F V +DEA QA EP L+PL
Sbjct: 844 RDGEDVWRASRFRVVITTCSSAGLFYQIGL-RVGH-FTHVFVDEAGQASEPECLIPLGLI 901
Query: 508 CK---QVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQ-RAGY 547
Q+ L GDP+QL + S +A G S+ +RL R Y
Sbjct: 902 SDIDGQIILAGDPMQLGPVIKSRLAMAYGLNVSMLERLMARPAY 945
Score = 81 (33.6 bits), Expect = 5.6e-21, Sum P(5) = 5.6e-21
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 247 GLLHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATP 301
G + + EN + ++ I G R ++ GPPGTGKT T++ + + HA P
Sbjct: 737 GFFNPMLNENQQLA-VKRILSGDCRPLPYVLFGPPGTGKTVTVIEAVLQVFHALP 790
Score = 57 (25.1 bits), Expect = 5.6e-21, Sum P(5) = 5.6e-21
Identities = 13/22 (59%), Positives = 16/22 (72%)
Query: 379 CAPSNSALDEIVLRLLNT-GIR 399
CAPSNSA D + LRL + G+R
Sbjct: 797 CAPSNSAADLVCLRLHESRGLR 818
Score = 38 (18.4 bits), Expect = 5.6e-21, Sum P(5) = 5.6e-21
Identities = 7/18 (38%), Positives = 14/18 (77%)
Query: 166 EVIHINKDAVKSQRLLNI 183
++I+ + +AV S+ LLN+
Sbjct: 56 DLIYFSNEAVTSRVLLNV 73
>UNIPROTKB|Q9BYK8 [details] [associations]
symbol:HELZ2 "Helicase with zinc finger domain 2"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004540 "ribonuclease activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=NAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0030374 "ligand-dependent
nuclear receptor transcription coactivator activity" evidence=IDA]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0044255 "cellular lipid
metabolic process" evidence=TAS] [GO:0044281 "small molecule
metabolic process" evidence=TAS] Reactome:REACT_111217
InterPro:IPR001900 InterPro:IPR003593 InterPro:IPR015880
InterPro:IPR026855 Pfam:PF00773 PROSITE:PS00028 PROSITE:PS50157
SMART:SM00355 SMART:SM00382 SMART:SM00955 GO:GO:0005524
Reactome:REACT_111045 GO:GO:0005654 GO:GO:0044281 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0044255
GO:GO:0006351 GO:GO:0003723 GO:GO:0004386 GO:GO:0004540
GO:GO:0030374 eggNOG:COG0557 InterPro:IPR022966 EMBL:AL121829
EMBL:AF517673 EMBL:AB201715 EMBL:AB051556 EMBL:AK074171
EMBL:AK055611 IPI:IPI00249304 IPI:IPI00249305 IPI:IPI00736631
RefSeq:NP_001032412.2 RefSeq:NP_208384.3 UniGene:Hs.517180
ProteinModelPortal:Q9BYK8 IntAct:Q9BYK8 STRING:Q9BYK8
PhosphoSite:Q9BYK8 DMDM:209572784 PaxDb:Q9BYK8 PRIDE:Q9BYK8
GeneID:85441 KEGG:hsa:85441 UCSC:uc002yfl.1 UCSC:uc002yfm.2
CTD:85441 GeneCards:GC20M062189 HGNC:HGNC:30021 HPA:HPA051267
MIM:611265 neXtProt:NX_Q9BYK8 HOGENOM:HOG000231856
HOVERGEN:HBG080465 InParanoid:Q9BYK8 OMA:FRAAHIM PhylomeDB:Q9BYK8
GenomeRNAi:85441 NextBio:76020 ArrayExpress:Q9BYK8 Bgee:Q9BYK8
Genevestigator:Q9BYK8 GermOnline:ENSG00000130589
PANTHER:PTHR10887:SF16 Uniprot:Q9BYK8
Length = 2649
Score = 249 (92.7 bits), Expect = 6.3e-21, Sum P(4) = 6.3e-21
Identities = 88/307 (28%), Positives = 142/307 (46%)
Query: 463 VIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLAT--GCKQVFLVGDPVQL 520
VI+C T S + SA L L+ +++DEA A EP TL+PL ++V L+GD QL
Sbjct: 2336 VILC-TCSCAASASLKILD--VRQILVDEAGMATEPETLIPLVQFPQAEKVVLLGDHKQL 2392
Query: 521 PATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSD 580
V + ++LG SLF+R + ML TQYRMH + +FPS FY L+
Sbjct: 2393 RPVVKNERLQNLGLDRSLFERYHEDAH---MLDTQYRMHEGICAFPSVAFYKSKLKTWQG 2449
Query: 581 VEDYTTRDWHEYRCFGPFSFFDI--HEGK---ESQPAGSGSWINIDEVDFVLLLFHKLIS 635
+ + H + P F + HE + S N++EV V+ + +L
Sbjct: 2450 LRRPPSVLGHAGKESCPVIFGHVQGHERSLLVSTDEGNENSKANLEEVAEVVRITKQLT- 2508
Query: 636 MYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVA-IFS 694
+ +A+++PY Q + + + G+ V IT G + R V+ + +
Sbjct: 2509 -LGRTVEPQDIAVLTPYNAQASEISKALRRE-GIAGVAVSSITKSQGSEWRYVLVSTVRT 2566
Query: 695 CVRAS-D--------KKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKS 745
C ++ D KK +GF+ D ++NV +TRA+ + ++G LR W +L+
Sbjct: 2567 CAKSDLDQRPTKSWLKKFLGFVVDPNQVNVAVTRAQEGLCLIGDHLLLRCCPLWRSLLDF 2626
Query: 746 AEKQDCL 752
E Q L
Sbjct: 2627 CEAQQTL 2633
Score = 129 (50.5 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 70/269 (26%), Positives = 110/269 (40%)
Query: 484 FDVVIIDEAAQAVEPATLVPLATGCK--QVFLVGDPVQLPATVISPVAEHLGYGTSLFKR 541
F ++IDEAAQ +E L PLA ++ L GD +Q+ + S VA +L R
Sbjct: 661 FSHILIDEAAQMLECEALTPLAYASHGTRLVLAGDHMQVTPRLFS-VARARAAEHTLLHR 719
Query: 542 L----QRAGYPVK-----MLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEY 592
L Q+ + V + YR + SF SR FY + G+ + H
Sbjct: 720 LFLCYQQETHEVARQSRLVFHENYRCTDAIVSFISRHFY---VAKGNPIHARGKVPPHP- 775
Query: 593 RCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPY 652
R + P F + G + SW+N+ E+ V+ + + +P + I
Sbjct: 776 RHY-PLMFCHV-AGSPDRDMSMASWLNLAEIAQVVEKVQEAYNTWPSCWGGREQRCICVV 833
Query: 653 RH--QVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKK-SIGFLA- 708
H QV ++ + V + + + GR+ V + S V S G LA
Sbjct: 834 SHGAQVSALRQELRR----RDLGQVSVGSFEILPGRQFRVVVLSTVHTCQSLLSPGALAP 889
Query: 709 ----DYRRMNVGITRAKSSILVVGCASTL 733
D R +N +TRA+S ++VVG A L
Sbjct: 890 EFFTDARVLNTVLTRAQSQLVVVGDAVAL 918
Score = 97 (39.2 bits), Expect = 6.3e-21, Sum P(4) = 6.3e-21
Identities = 26/52 (50%), Positives = 32/52 (61%)
Query: 241 QSWKIPGLLHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGL 292
Q++ IPG H+ N SQ A+ E L K F +IQGPPGTGKT I+GL
Sbjct: 2142 QTYNIPGGRHKL-----NPSQNVAVREAL-EKPFTVIQGPPGTGKT--IVGL 2185
Score = 60 (26.2 bits), Expect = 6.3e-21, Sum P(4) = 6.3e-21
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 52 REVKDTYKDVDDYLATFEPLLFEEVKAQIIQKKDEEEVQ 90
R +D Y+DVD+Y +EP E + + D +Q
Sbjct: 1929 RAPRDRYRDVDEYACVWEPFCALESATGAVAENDSVTLQ 1967
Score = 58 (25.5 bits), Expect = 1.3e-15, Sum P(3) = 1.3e-15
Identities = 20/74 (27%), Positives = 37/74 (50%)
Query: 217 RSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIKENHNASQLEAIHEGLLRKAF-V 275
++V +LP + L++ + + + + W +P L K+ + + G R+ +
Sbjct: 483 QAVDTLPEEQLVVP--DLPTCALPRPWSVPPLRRGNRKQELAVALIAGWGPGDGRRVPPL 540
Query: 276 LIQGPPGTGKTQTI 289
LI GP GTGKT T+
Sbjct: 541 LIYGPFGTGKTYTL 554
Score = 37 (18.1 bits), Expect = 6.3e-21, Sum P(4) = 6.3e-21
Identities = 9/29 (31%), Positives = 17/29 (58%)
Query: 379 CAPSNSALDEIVLRLLNTGIRDENIRSYT 407
C PSN ++D ++ LL + + +R Y+
Sbjct: 2219 CGPSNKSVD-VLAGLLLRRMELKPLRVYS 2246
Score = 37 (18.1 bits), Expect = 8.2e-16, Sum P(3) = 8.2e-16
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 275 VLIQGPPGTGKTQTIL-GLLSAILHATPARVHSK 307
+L GP + K+ +L GLL + P RV+S+
Sbjct: 2216 ILYCGP--SNKSVDVLAGLLLRRMELKPLRVYSE 2247
>UNIPROTKB|E1BZJ8 [details] [associations]
symbol:MOV10L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007281 "germ cell development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
GeneTree:ENSGT00550000074391 OMA:NMSGVTL InterPro:IPR026125
PANTHER:PTHR10887:SF6 EMBL:AADN02050039 EMBL:AADN02050037
EMBL:AADN02050038 IPI:IPI00585215 Ensembl:ENSGALT00000013959
ArrayExpress:E1BZJ8 Uniprot:E1BZJ8
Length = 1192
Score = 187 (70.9 bits), Expect = 6.4e-21, Sum P(4) = 6.4e-21
Identities = 64/198 (32%), Positives = 97/198 (48%)
Query: 549 VKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR-DWHEYRCFG-PFSFFDIHEG 606
+ L YR H + + PS+ FY + LE +D ++ W + G P F + G
Sbjct: 972 ITKLVNNYRSHSALLALPSKLFYHKELEVCADTSVVSSLLHWEKLPRKGFPLIFHGVR-G 1030
Query: 607 KESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKET 666
KE++ S SW N E V+ L S + + +I+PYR QV E+ K
Sbjct: 1031 KETREGHSPSWFNPTEAVQVMQYCCHLAKNESIAVSVTDIGVITPYRKQV----EKIK-- 1084
Query: 667 FGVESQKVVDIT--TVDGCQGREKDVAIFSCVR------ASDKKSIGFLADYRRMNVGIT 718
F + S + DI TV+ QG+E V I S VR A ++ +GFL++ +R NV IT
Sbjct: 1085 FLLRSIDLSDIKVGTVEEFQGQECMVTILSTVRSYEDTFAEEEYCLGFLSNPKRFNVAIT 1144
Query: 719 RAKSSILVVGCASTLRED 736
RAK+ ++V+G L +D
Sbjct: 1145 RAKALLIVIGNPHLLVKD 1162
Score = 125 (49.1 bits), Expect = 6.4e-21, Sum P(4) = 6.4e-21
Identities = 38/99 (38%), Positives = 53/99 (53%)
Query: 449 KDRDSIRSAILNEAVIV-CSTLS-FSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLAT 506
KD D I A+ +I CS+ F + ++L H F VI+DEA QA EP +L+P+
Sbjct: 853 KDGDDIWKAVWFRIIITTCSSAGMFYQTG--TRLGH-FTHVILDEAGQASEPESLIPIGL 909
Query: 507 GCK---QVFLVGDPVQLPATVISPVAEHLGYGTSLFKRL 542
+ Q+ LVGDP QL + S +A G SL +RL
Sbjct: 910 ISEVNGQIVLVGDPKQLGPLIKSRIAVAFGLNISLLERL 948
Score = 66 (28.3 bits), Expect = 6.4e-21, Sum P(4) = 6.4e-21
Identities = 24/112 (21%), Positives = 49/112 (43%)
Query: 189 SSVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGL 248
S +SA K + ++ + L + +A R + + + S+ ++ W+
Sbjct: 690 SDISA--KTVDTVFVRKLQNKQTKCMASRQINTADAVTASVETSQLVEETETIKWRAGEF 747
Query: 249 LHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHAT 300
+ + + + ++ I G R ++ GPPGTGKT T++ + I H T
Sbjct: 748 FNPMLNKQQKLA-VKRILSGECRPTPYILFGPPGTGKTITVVEAILQI-HFT 797
Score = 53 (23.7 bits), Expect = 6.4e-21, Sum P(4) = 6.4e-21
Identities = 11/15 (73%), Positives = 12/15 (80%)
Query: 379 CAPSNSALDEIVLRL 393
CAPSN+A D I LRL
Sbjct: 806 CAPSNAATDLICLRL 820
>UNIPROTKB|F1RMM8 [details] [associations]
symbol:LOC100519780 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0045944 "positive regulation of transcription from
RNA polymerase II promoter" evidence=IEA] [GO:0030374
"ligand-dependent nuclear receptor transcription coactivator
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004540
"ribonuclease activity" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001900 InterPro:IPR003593
InterPro:IPR026855 Pfam:PF00773 PROSITE:PS50103 SMART:SM00382
SMART:SM00955 GO:GO:0005524 GO:GO:0008270 GO:GO:0003723
GO:GO:0004386 GO:GO:0004540 InterPro:IPR022966 PROSITE:PS01175
OMA:FRAAHIM PANTHER:PTHR10887:SF16 GeneTree:ENSGT00550000074391
EMBL:FP102633 Ensembl:ENSSSCT00000003670 Uniprot:F1RMM8
Length = 2879
Score = 259 (96.2 bits), Expect = 1.3e-20, Sum P(4) = 1.3e-20
Identities = 93/305 (30%), Positives = 144/305 (47%)
Query: 463 VIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLAT--GCKQVFLVGDPVQL 520
V++C T S + SA L +N +++DEA A EP TL+PL + ++V L+GD QL
Sbjct: 2568 VLLC-TCSCAASASLRDVN--IRQILVDEAGLASEPETLIPLVSFSQVEKVVLLGDHKQL 2624
Query: 521 PATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSD 580
V S ++LG SL +R +R ML QY +H + +FPS EFY + L+
Sbjct: 2625 RPVVKSEQLQNLGLDRSLLQRYRR---DASMLDLQYCVHESICAFPSMEFYKKKLKTWQG 2681
Query: 581 VE-DYTTRDWHEYRCFGPFSFFDIHEGKES-----QPAGSGSWINIDEVDFVLLLFHKLI 634
+ + + + C F D+ +ES + S +N ++ V+ L +L+
Sbjct: 2682 LRLPPSILGYGKENC--SVIFGDVQSPEESLVVSTEEGRENSKVNKEQAALVVCLAKQLV 2739
Query: 635 SMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFS 694
S K +AI++PY QV + +R +E V V IT G Q R V+
Sbjct: 2740 SGRVDPKD---MAILTPYHAQVLEISKRLEEA-RVAGVTVCSITKSQGRQWRYVLVSTVR 2795
Query: 695 CVRASD----------KKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVK 744
+ SD +KS+GFL D ++NV +TRA+ + VVG LR W+ +
Sbjct: 2796 TCQESDLDLRPTKSWLQKSLGFLVDPNQVNVALTRAQEGLWVVGDRLLLRCCPLWSRFLD 2855
Query: 745 SAEKQ 749
E Q
Sbjct: 2856 FCEAQ 2860
Score = 213 (80.0 bits), Expect = 1.0e-15, Sum P(4) = 1.0e-15
Identities = 86/313 (27%), Positives = 144/313 (46%)
Query: 416 KAHHSVNSVAIDHLVEQKRDDSAADKQKHGATRKD-----RDSIR--SAILNEA------ 462
+ + ++ S+ + H + Q + AAD + A ++ +D +R +L EA
Sbjct: 2505 RPNQTLRSITLHHRIRQASNPYAADIRAFDARLQNGETFSQDDLRWYRKVLQEARKFEVD 2564
Query: 463 ---VIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLAT--GCKQVFLVGDP 517
V++C T S + SA L +N +++DEA A EP TL+PL + ++V L+GD
Sbjct: 2565 RHRVLLC-TCSCAASASLRDVN--IRQILVDEAGLASEPETLIPLVSFSQVEKVVLLGDH 2621
Query: 518 VQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALED 577
QL V S ++LG SL +R +R ML QY +H + +FPS EFY + L+
Sbjct: 2622 KQLRPVVKSEQLQNLGLDRSLLQRYRR---DASMLDLQYCVHESICAFPSMEFYKKKLKT 2678
Query: 578 GSDVE-DYTTRDWHEYRCFGPFSFFDIHEGKES-----QPAGSGSWINIDEVDFVLLLFH 631
+ + + + C F D+ +ES + S +N ++ V+ L
Sbjct: 2679 WQGLRLPPSILGYGKENC--SVIFGDVQSPEESLVVSTEEGRENSKVNKEQAALVVCLAK 2736
Query: 632 KLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVA 691
+L+S K +AI++PY QV + +R +E V V IT QGR+
Sbjct: 2737 QLVSGRVDPKD---MAILTPYHAQVLEISKRLEEA-RVAGVTVCSITK---SQGRQWRYV 2789
Query: 692 IFSCVRASDKKSI 704
+ S VR + +
Sbjct: 2790 LVSTVRTCQESDL 2802
Score = 95 (38.5 bits), Expect = 1.3e-20, Sum P(4) = 1.3e-20
Identities = 24/52 (46%), Positives = 33/52 (63%)
Query: 241 QSWKIPGLLHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGL 292
Q++ +PG LH+ N SQ A+ E L +K F +I GPPGTGKT ++GL
Sbjct: 2374 QAFDMPGGLHKL-----NPSQNTAVREAL-KKQFTVIHGPPGTGKT--VVGL 2417
Score = 50 (22.7 bits), Expect = 1.3e-20, Sum P(4) = 1.3e-20
Identities = 10/37 (27%), Positives = 17/37 (45%)
Query: 55 KDTYKDVDDYLATFEPLLFEEVKAQIIQKKDEEEVQE 91
+D Y D+D+Y +EP E + D +Q+
Sbjct: 2119 RDQYHDLDEYARVWEPFCSLESATNAVVASDSVILQD 2155
Score = 42 (19.8 bits), Expect = 6.4e-15, Sum P(3) = 6.4e-15
Identities = 8/15 (53%), Positives = 11/15 (73%)
Query: 275 VLIQGPPGTGKTQTI 289
+L+ GP GTGKT +
Sbjct: 784 LLVCGPFGTGKTYAL 798
Score = 37 (18.1 bits), Expect = 1.3e-20, Sum P(4) = 1.3e-20
Identities = 8/28 (28%), Positives = 16/28 (57%)
Query: 379 CAPSNSALDEIVLRLLNTGIRDENIRSY 406
C+PS+ ++D + LL+ + +R Y
Sbjct: 2450 CSPSSKSVDVLAELLLSRRAELKPLRVY 2477
>WB|WBGene00001016 [details] [associations]
symbol:dna-2 species:6239 "Caenorhabditis elegans"
[GO:0043142 "single-stranded DNA-dependent ATPase activity"
evidence=IEA;IDA] [GO:0017108 "5'-flap endonuclease activity"
evidence=IEA] [GO:0033567 "DNA replication, Okazaki fragment
processing" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0043141 "ATP-dependent 5'-3' DNA helicase
activity" evidence=IDA] [GO:0000014 "single-stranded DNA specific
endodeoxyribonuclease activity" evidence=IDA] [GO:0006259 "DNA
metabolic process" evidence=IDA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 GO:GO:0005634 GO:GO:0009792
eggNOG:COG1112 GO:GO:0017108 GO:GO:0000014 GO:GO:0043142
GO:GO:0033567 PANTHER:PTHR10887:SF14 KO:K10742
GeneTree:ENSGT00550000074852 OMA:EHESLCH GO:GO:0043141 EMBL:Z50070
PIR:T22132 RefSeq:NP_496515.1 ProteinModelPortal:Q20371 SMR:Q20371
STRING:Q20371 PaxDb:Q20371 PRIDE:Q20371 EnsemblMetazoa:F43G6.1a
GeneID:174809 KEGG:cel:CELE_F43G6.1 UCSC:F43G6.1a CTD:174809
WormBase:F43G6.1a HOGENOM:HOG000016745 InParanoid:Q20371
NextBio:885596 ArrayExpress:Q20371 Uniprot:Q20371
Length = 1105
Score = 252 (93.8 bits), Expect = 1.3e-20, Sum P(2) = 1.3e-20
Identities = 94/306 (30%), Positives = 144/306 (47%)
Query: 453 SIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVF 512
++R + ++ C T LL H FDVVI+DEA+ +EP L LAT K V
Sbjct: 791 AVRKVMKTTPIVAC-TCHHVPRELLFSYRH-FDVVIVDEASMVLEPLLLPVLATSNKFV- 847
Query: 513 LVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYP--VKMLKTQYRMHPEVRSFPSREF 570
LVGD QL V+S A+ G G S ++LQ++ +P V L +QYRM+ E+ S+ F
Sbjct: 848 LVGDCKQLTPLVVSRKAKQEGAGISTMEKLQQS-HPGVVVSLTSQYRMNREISVLSSKLF 906
Query: 571 YDEALEDGSD---------VEDYTTR--DWHEY---RCFGPFS----FFD----IHEGKE 608
Y+ L G++ DY D ++ G F D I+ +
Sbjct: 907 YENRLICGNESVSRSSLDRTGDYIVAMDDGSDHIRKALSGDIKDSCVFLDTQSTINSKMQ 966
Query: 609 SQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFG 668
+ G N E + L + + +K ++ ++S YR QV + G
Sbjct: 967 CEDGEGGGMCNDGEAKLISELCQQFVMS--GVKPH-EIGVMSAYRRQVDHIR-------G 1016
Query: 669 VESQKVVDITTVDGCQGREKDVAIFSCV--RASDKKSIGFLADYRRMNVGITRAKSSILV 726
+ + +++ T+D QGREK V I+S S KKS L D RR+NV +TRA+ ++V
Sbjct: 1017 ILNSDELEVNTIDSYQGREKRVIIWSLTWTNNSTKKS-ELLKDERRVNVALTRARQKLVV 1075
Query: 727 VGCAST 732
VGC ++
Sbjct: 1076 VGCKNS 1081
Score = 81 (33.6 bits), Expect = 1.3e-20, Sum P(2) = 1.3e-20
Identities = 20/59 (33%), Positives = 33/59 (55%)
Query: 246 PGLLHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARV 304
P + IK N Q +A+ L + F++++G PG+GKT T++ +L L AT +V
Sbjct: 675 PAIKKIIIKAKLNNEQRKAVVHALATEDFMMVEGLPGSGKT-TLISVLIQCLVATNKKV 732
>MGI|MGI:2138982 [details] [associations]
symbol:Znfx1 "zinc finger, NFX1-type containing 1"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0046872 "metal
ion binding" evidence=IEA] MGI:MGI:2138982 GO:GO:0046872
EMBL:CH466551 eggNOG:COG1112 GeneTree:ENSGT00700000104467
EMBL:AL591711 CTD:57169 HOVERGEN:HBG052201 OMA:CVRLCSE
EMBL:AK149249 EMBL:AK150223 EMBL:AK157301 EMBL:BC025488
IPI:IPI00660406 RefSeq:NP_001028368.2 UniGene:Mm.297074
ProteinModelPortal:Q8R151 STRING:Q8R151 PhosphoSite:Q8R151
PaxDb:Q8R151 PRIDE:Q8R151 Ensembl:ENSMUST00000048988 GeneID:98999
KEGG:mmu:98999 HOGENOM:HOG000231023 InParanoid:A2A5R3
NextBio:353739 Bgee:Q8R151 CleanEx:MM_ZNFX1 Genevestigator:Q8R151
GermOnline:ENSMUSG00000039501 Uniprot:Q8R151
Length = 1909
Score = 247 (92.0 bits), Expect = 5.4e-20, Sum P(2) = 5.4e-20
Identities = 80/296 (27%), Positives = 141/296 (47%)
Query: 458 ILNEAVIVCSTLSFSGSALLSKLNHGFD--VVIIDEAAQAVEPATLVPLATGCKQVFLVG 515
IL +A +V T + G+A ++ + +VI++EAA+ +E T+ L+ C+ + L+G
Sbjct: 967 ILKDAEVVGMTTT--GAAKYRQILQQVEPRIVIVEEAAEVLEAHTIATLSKACQHLILIG 1024
Query: 516 DPVQL-PATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEA 574
D QL P+ + +A++ SLF+RL + P L Q+RM PE+ + Y +
Sbjct: 1025 DHQQLRPSANVYDLAKNFNLEVSLFERLVKVNIPFVRLNYQHRMRPEIARLLTPHIYQD- 1083
Query: 575 LEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLI 634
LE+ V Y + + FF H E + S N E FV+ L L+
Sbjct: 1084 LENHPSVLKY-----EQIKGVSSNLFFVEHNFPEQEIQEGKSHQNQHEAHFVVELCQYLL 1138
Query: 635 SMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFS 694
Q SQ+ I++ Y Q+ F R + V++ + + VD QG E D+ + S
Sbjct: 1139 C---QEYLPSQITILTTYTGQL--FCLR--KLMPVKTFAGIKVHVVDKYQGEENDIILLS 1191
Query: 695 CVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQD 750
VR++ + +GFL R+ V ++RAK + +G L + W+ ++ + + +
Sbjct: 1192 LVRSNQEGKVGFLQIPNRICVALSRAKKGMYCIGNMQMLAKVPLWSRIIHTLRENN 1247
Score = 86 (35.3 bits), Expect = 5.4e-20, Sum P(2) = 5.4e-20
Identities = 19/38 (50%), Positives = 26/38 (68%)
Query: 260 SQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAIL 297
SQ+EA+ + L K +IQGPPGTGKT L ++ A+L
Sbjct: 594 SQMEAL-QFALTKELAIIQGPPGTGKTYVGLKIVQALL 630
Score = 38 (18.4 bits), Expect = 5.4e-15, Sum P(2) = 5.4e-15
Identities = 9/48 (18%), Positives = 20/48 (41%)
Query: 224 FKDLILSASEKSSGSQDQSWKIPGLLHEYIKENHNASQLEAIH-EGLL 270
+ ++ E Q+ + + +H ++E H + A H E L+
Sbjct: 708 YMSIVTEMKESEQKLQEGAQTLECTMHGVLREQHLEKYISAQHWESLM 755
>RGD|1304735 [details] [associations]
symbol:Mov10l1 "Mov10l1, Moloney leukemia virus 10-like 1,
homolog (mouse)" species:10116 "Rattus norvegicus" [GO:0007281
"germ cell development" evidence=ISO] [GO:0007283 "spermatogenesis"
evidence=ISO] [GO:0007517 "muscle organ development" evidence=ISO]
[GO:0008283 "cell proliferation" evidence=ISO] [GO:0045786
"negative regulation of cell cycle" evidence=ISO] RGD:1304735
GeneTree:ENSGT00550000074391 InterPro:IPR026125
PANTHER:PTHR10887:SF6 IPI:IPI00560261 Ensembl:ENSRNOT00000050620
ArrayExpress:F1M357 Uniprot:F1M357
Length = 550
Score = 176 (67.0 bits), Expect = 5.6e-20, Sum P(4) = 5.6e-20
Identities = 58/203 (28%), Positives = 99/203 (48%)
Query: 550 KMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR-DWHEYRCFG-PFSFFDIHEGK 607
K++K YR H + + PSR FY LE +D + T+ W + G P F + G
Sbjct: 332 KLVKN-YRSHSALLALPSRLFYHRELEVCADPKVVTSLLGWEKLPRKGFPLIFHGVR-GN 389
Query: 608 ESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETF 667
E++ S SW + E V+ L SS + +I+PYR QV++ + +
Sbjct: 390 EAREGRSPSWFSPAEAVQVMRYCCLLARNVSSQVSSKDIGVITPYRKQVEKIKILLRNVD 449
Query: 668 GVESQKVVDITTVDGCQGREKDVAIFSCVRAS------DKKSIGFLADYRRMNVGITRAK 721
+ + + +V+ QG+E V + S VR++ D+ +GFL++ +R NV ITR K
Sbjct: 450 LTD----IKVGSVEEFQGQEYLVIVISTVRSNEDRFEDDRYFLGFLSNSKRFNVAITRPK 505
Query: 722 SSILVVGCASTLREDKHWNNLVK 744
+ ++V+G L D + L++
Sbjct: 506 ALLIVLGNPHVLVRDPCFGALLE 528
Score = 105 (42.0 bits), Expect = 5.6e-20, Sum P(4) = 5.6e-20
Identities = 32/89 (35%), Positives = 44/89 (49%)
Query: 464 IVCSTLSFSGSALLSKLNHG-FDVVIIDEAAQAVEPATLVPLATGCK---QVFLVGDPVQ 519
I+ +T S +G + G F V +DEA QA EP L+PL Q+ L GDP+Q
Sbjct: 224 IIITTCSSAGLFYQIGVRVGYFTHVFVDEAGQASEPECLIPLGLISDINGQIVLAGDPMQ 283
Query: 520 LPATVISPVAEHLGYGTSLFKRLQ-RAGY 547
L + S +A G S+ +RL R Y
Sbjct: 284 LGPVIKSRLAMAYGLNVSMLERLMSRPAY 312
Score = 68 (29.0 bits), Expect = 5.6e-20, Sum P(4) = 5.6e-20
Identities = 17/49 (34%), Positives = 26/49 (53%)
Query: 253 IKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATP 301
+ EN + + I G R ++ GPPGTGKT TI+ + + +A P
Sbjct: 110 LNENQKLA-VRRILSGDCRPLPYILFGPPGTGKTVTIIEAVLQVHYALP 157
Score = 55 (24.4 bits), Expect = 5.6e-20, Sum P(4) = 5.6e-20
Identities = 11/15 (73%), Positives = 12/15 (80%)
Query: 379 CAPSNSALDEIVLRL 393
CAPSNSA D + LRL
Sbjct: 164 CAPSNSAADLVCLRL 178
>UNIPROTKB|E2RBM4 [details] [associations]
symbol:PRIC285 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004540
"ribonuclease activity" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001900 InterPro:IPR003593
InterPro:IPR026855 Pfam:PF00773 PROSITE:PS50103 SMART:SM00382
SMART:SM00955 GO:GO:0005524 GO:GO:0008270 GO:GO:0003723
GO:GO:0004386 GO:GO:0004540 InterPro:IPR022966 PROSITE:PS01175
PANTHER:PTHR10887:SF16 GeneTree:ENSGT00550000074391
EMBL:AAEX03014158 Ensembl:ENSCAFT00000020582 OMA:RCQYAHS
Uniprot:E2RBM4
Length = 2919
Score = 264 (98.0 bits), Expect = 1.3e-19, Sum P(4) = 1.3e-19
Identities = 111/382 (29%), Positives = 164/382 (42%)
Query: 404 RSYTPKIVRIGLKAHHSVNSVAIDHLVEQKRDDSAAD-------KQKHGATRKDRDSIRS 456
R K R G + + ++ S+ + H V Q + A D QK K+ S
Sbjct: 2532 RGLPKKSPREG-RPNQTLRSITLHHRVRQSSNPYAPDIRDFDARLQKGEILSKEDLSWYK 2590
Query: 457 AILNEA---------VIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATG 507
IL +A VI+C T S + SA L KL+ ++IDEA A EP TL+PL
Sbjct: 2591 TILGKARKFELDQHRVILC-TCSCAASASLRKLD--VRQILIDEAGMATEPETLIPLVAF 2647
Query: 508 CK--QVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSF 565
K +V L+GD QL V + ++LG SLF+R + ML TQYRMH + +F
Sbjct: 2648 SKAEKVVLLGDHKQLRPVVKNEQLQNLGLDRSLFERYHVDAH---MLDTQYRMHEGICAF 2704
Query: 566 PSREFYDEALEDGSDVEDYTTRDWH--EYRCFGPFSFFDIHEGK---ESQPAGSGSWINI 620
PS EFY++ L+ + + H + C F HE + S N
Sbjct: 2705 PSMEFYEKKLKTWQGLRRPPSILGHIGKESCSVIFGHVQGHEQSLLVSTDEGNENSKANP 2764
Query: 621 DEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTV 680
+EV V+ + +L + +AI++PY Q + +R GV V IT
Sbjct: 2765 EEVAAVVRIAKQLT--LGRTVEPKDVAILTPYNAQAAEISKRLVRE-GVSGVTVCSITKS 2821
Query: 681 DGCQGREKDVAIFSCVRASD----------KKSIGFLADYRRMNVGITRAKSSILVVGCA 730
G + R V+ + SD K+ +GF+ D ++NV ITRA+ + V+G
Sbjct: 2822 QGSEWRYVLVSTVRTCQESDLDQRPTKSWLKRFLGFVVDPNQVNVAITRAREGLCVIGDH 2881
Query: 731 STLREDKHWNNLVKSAEKQDCL 752
L W + E Q L
Sbjct: 2882 RLLSCCPLWRRFLDFCEAQRSL 2903
Score = 177 (67.4 bits), Expect = 1.7e-07, Sum P(3) = 1.7e-07
Identities = 93/328 (28%), Positives = 141/328 (42%)
Query: 449 KDRDSIRS---AILNEAVIVCSTLSFSGSALLSKLNHGF-DVVIIDEAAQAVEPATLVPL 504
+DR + R+ A L + IV +T S A ++ GF ++IDEAAQ +E L PL
Sbjct: 872 QDRRAFRAPTRAELEQHRIVVTTTS---QARELRVPAGFFSHILIDEAAQMLECEALTPL 928
Query: 505 --ATGCKQVFLVGDPVQLPATVIS-PVAEHLGYGT--SLFKRLQRAGYPV----KMLKTQ 555
A +V L GD +Q+ + S P A+ G+ LF+ QR + V +++ Q
Sbjct: 929 RYAAPGTRVVLAGDHMQVTPRLFSVPRAQAAGHTLLYRLFQHYQREAHEVAQRSRLIFHQ 988
Query: 556 -YRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGS 614
YR + SF SR FY + GS + H P F + G + S
Sbjct: 989 NYRSTEAILSFVSRHFY---VAKGSPIHASGRVPPHPR--LHPLMFCHV-AGNPERDLSS 1042
Query: 615 GSWINIDEVDFVLLLFHKLISMYPQL---KSSSQLAIISPYRHQVKQF-QERFKETFGVE 670
SW+N EV V+ L +P + + ++S + QV QE K G
Sbjct: 1043 TSWLNAAEVAQVVEQVRDLHDGWPSCWGAREQKHICVVS-HGAQVTALRQELRKRNLGQ- 1100
Query: 671 SQKVVDITTVDGCQGREKDVAIFSCVR------ASDKKSIGFLADYRRMNVGITRAKSSI 724
V + + + GRE V + S V +S S+GF D R +N +TRA+S +
Sbjct: 1101 ----VSVGSFEILPGREFRVVVLSTVHNHHSLLSSGTASLGFFTDARVLNTIMTRAQSQV 1156
Query: 725 LVVGCASTLRED----KHWNNLVKSAEK 748
+ VG A L K W + ++ K
Sbjct: 1157 VAVGNALALCSSGACSKLWKSFIRECVK 1184
Score = 85 (35.0 bits), Expect = 1.3e-19, Sum P(4) = 1.3e-19
Identities = 21/48 (43%), Positives = 28/48 (58%)
Query: 239 QDQSWKIPGLLHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKT 286
+ Q++ +PG H N SQ A+ L +K F +IQGPPGTGKT
Sbjct: 2410 EKQAFDLPGGPHTL-----NRSQNRAVRAAL-KKQFTVIQGPPGTGKT 2451
Score = 50 (22.7 bits), Expect = 4.4e-16, Sum P(4) = 4.4e-16
Identities = 10/15 (66%), Positives = 12/15 (80%)
Query: 275 VLIQGPPGTGKTQTI 289
+LI GP GTGKT T+
Sbjct: 787 LLIYGPFGTGKTYTL 801
Score = 41 (19.5 bits), Expect = 1.3e-19, Sum P(4) = 1.3e-19
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 379 CAPSNSALDEIVLRLLNTGIRDENIRSYT 407
C PSN ++D + LL+ + +R Y+
Sbjct: 2488 CGPSNKSVDVLAGLLLSRRAELKPLRVYS 2516
Score = 41 (19.5 bits), Expect = 1.3e-19, Sum P(4) = 1.3e-19
Identities = 18/71 (25%), Positives = 34/71 (47%)
Query: 33 SQERNDKNSKKVDRGKLGLREVKDTY--KDVDDYLATFE----PLLFEEVKAQIIQKK-D 85
SQE + + ++ ++ + + ++ + + L+TFE P L E I K
Sbjct: 298 SQEAFENHCSSLEHAQMVVLDQEECWEHRSPPTGLSTFELCPNPSLCEY--GDICTKAHS 355
Query: 86 EEEVQEWKLRL 96
E+E+QEW R+
Sbjct: 356 EQELQEWTRRV 366
>UNIPROTKB|Q9BXT6 [details] [associations]
symbol:MOV10L1 "Putative helicase Mov10l1" species:9606
"Homo sapiens" [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=NAS] [GO:0007283 "spermatogenesis" evidence=IEP]
[GO:0005524 "ATP binding" evidence=TAS] [GO:0000287 "magnesium ion
binding" evidence=TAS] [GO:0003723 "RNA binding" evidence=TAS]
[GO:0007281 "germ cell development" evidence=IEP] [GO:0005622
"intracellular" evidence=IC] GO:GO:0007275 GO:GO:0005524
GO:GO:0000287 GO:GO:0007283 GO:GO:0003723 GO:GO:0005622
GO:GO:0007281 eggNOG:COG1112 GO:GO:0004004 EMBL:AL022328
EMBL:AF285604 EMBL:AK000033 EMBL:AK090740 EMBL:CR456466
EMBL:AL034546 EMBL:BC150137 EMBL:BC152539 EMBL:AL133068
IPI:IPI00005638 IPI:IPI00178391 IPI:IPI00215671 IPI:IPI00853536
PIR:T42668 RefSeq:NP_001157576.1 RefSeq:NP_001157577.1
RefSeq:NP_001157578.1 RefSeq:NP_061868.1 UniGene:Hs.62880
ProteinModelPortal:Q9BXT6 SMR:Q9BXT6 STRING:Q9BXT6
PhosphoSite:Q9BXT6 DMDM:22095856 PaxDb:Q9BXT6 PeptideAtlas:Q9BXT6
PRIDE:Q9BXT6 DNASU:54456 Ensembl:ENST00000262794
Ensembl:ENST00000354853 Ensembl:ENST00000395843
Ensembl:ENST00000395852 Ensembl:ENST00000395858
Ensembl:ENST00000545383 GeneID:54456 KEGG:hsa:54456 UCSC:uc003bjj.3
UCSC:uc003bjl.3 UCSC:uc003bjm.1 CTD:54456 GeneCards:GC22P050528
HGNC:HGNC:7201 HPA:HPA019034 MIM:605794 neXtProt:NX_Q9BXT6
PharmGKB:PA30909 HOVERGEN:HBG052382 InParanoid:Q9BXT6 KO:K13983
OMA:NMSGVTL OrthoDB:EOG49GKFV PhylomeDB:Q9BXT6 GenomeRNAi:54456
NextBio:56697 ArrayExpress:Q9BXT6 Bgee:Q9BXT6 CleanEx:HS_MOV10L1
Genevestigator:Q9BXT6 GermOnline:ENSG00000073146 InterPro:IPR026125
PANTHER:PTHR10887:SF6 Uniprot:Q9BXT6
Length = 1211
Score = 185 (70.2 bits), Expect = 1.5e-19, Sum P(4) = 1.5e-19
Identities = 64/207 (30%), Positives = 103/207 (49%)
Query: 550 KMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR-DWHEYRCFG-PFSFFDIHEGK 607
K++K YR H + PSR FY LE +D T+ W + G P F + G
Sbjct: 967 KLVKN-YRSHEALLMLPSRLFYHRELEVCADPTVVTSLLGWEKLPKKGFPLIFHGVR-GS 1024
Query: 608 ESQPAGSGSWINIDEVDFVL----LLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERF 663
E++ S SW N E VL LL H + S S+S + +I+PYR QV++ +
Sbjct: 1025 EAREGKSPSWFNPAEAVQVLRYCCLLAHSISSQV----SASDIGVITPYRKQVEKIRILL 1080
Query: 664 KETFGVESQKVVDITTVDGCQGREKDVAIFSCVRAS------DKKSIGFLADYRRMNVGI 717
+ ++ + + +V+ QG+E V I S VR++ D+ +GFL++ +R NV I
Sbjct: 1081 RNVDLMD----IKVGSVEEFQGQEYLVIIISTVRSNEDRFEDDRYFLGFLSNSKRFNVAI 1136
Query: 718 TRAKSSILVVGCASTLREDKHWNNLVK 744
TR K+ ++V+G L D + L++
Sbjct: 1137 TRPKALLIVLGNPHVLVRDPCFGALLE 1163
Score = 107 (42.7 bits), Expect = 1.5e-19, Sum P(4) = 1.5e-19
Identities = 33/89 (37%), Positives = 43/89 (48%)
Query: 464 IVCSTLSFSGSALLSKLNHG-FDVVIIDEAAQAVEPATLVPLATGCK---QVFLVGDPVQ 519
I+ +T S SG + G F V +DEA QA EP L+PL Q+ L GDP+Q
Sbjct: 859 IIITTCSSSGLFYQIGVRVGHFTHVFVDEAGQASEPECLIPLGLMSDISGQIVLAGDPMQ 918
Query: 520 LPATVISPVAEHLGYGTSLFKRLQ-RAGY 547
L + S +A G S +RL R Y
Sbjct: 919 LGPVIKSRLAMAYGLNVSFLERLMSRPAY 947
Score = 71 (30.1 bits), Expect = 1.5e-19, Sum P(4) = 1.5e-19
Identities = 51/218 (23%), Positives = 93/218 (42%)
Query: 95 RLVMECGEADGFHLPSVTYEADEVESISPNDLLLLSKEEFKEGSTF-PT----TYAFALV 149
+L+++ E +G + ++Y V I D+ L EF++ F P TY
Sbjct: 585 KLILKTQEYNGHAIEYISY----VTEIHEEDVTLKINPEFEQAYNFEPMDVEFTYNRTTS 640
Query: 150 EHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNI--HSLIT-SSVSAVEKRLFSLKICSL 206
C L + ++L +V+ + ++S ++ H+ T SS + K+ + K ++
Sbjct: 641 RRCHFALEHV-IHLGVKVLFPEEIILQSPQVTGNWNHAQDTKSSGQSTSKK--NRK--TM 695
Query: 207 STIAREYLALRSVGSLPFKDLILSASEKSSGSQD-QSWKIPGL--LHEYIKENHNASQLE 263
+ A R VG L +E S + Q+ K + + + EN + ++
Sbjct: 696 TDQAEHGTEERRVGDKDLPVLAPFTAEMSDWVDEIQTPKARKMEFFNPVLNENQKLA-VK 754
Query: 264 AIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATP 301
I G R ++ GPPGTGKT TI+ + + A P
Sbjct: 755 RILSGDCRPLPYILFGPPGTGKTVTIIEAVLQVHFALP 792
Score = 55 (24.4 bits), Expect = 1.5e-19, Sum P(4) = 1.5e-19
Identities = 11/15 (73%), Positives = 12/15 (80%)
Query: 379 CAPSNSALDEIVLRL 393
CAPSNSA D + LRL
Sbjct: 799 CAPSNSAADLVCLRL 813
Score = 44 (20.5 bits), Expect = 7.8e-17, Sum P(4) = 7.8e-17
Identities = 12/44 (27%), Positives = 27/44 (61%)
Query: 166 EVIHINKDAVKSQRLLNIHSLITSSV--SAVEKRLFSLKICSLS 207
++I+ + DAV S+ LLN+ + + V + V L ++++ ++S
Sbjct: 56 DMIYFSSDAVTSRVLLNVGQEVIAVVEENKVSNGLKAIRVEAVS 99
Score = 43 (20.2 bits), Expect = 6.6e-12, Sum P(3) = 6.6e-12
Identities = 17/67 (25%), Positives = 34/67 (50%)
Query: 455 RSAILNEAVI-VCSTLSFSGSALLSKLNHGFDVVIID-EAAQAVEPATLVPLATGCKQVF 512
++ + EAV+ V L S + + N D+V + ++ ++PAT+V + C+
Sbjct: 776 KTVTIIEAVLQVHFALPDSRILVCAPSNSAADLVCLRLHESKVLQPATMVRVNATCRFEE 835
Query: 513 LVGDPVQ 519
+V D V+
Sbjct: 836 IVIDAVK 842
>WB|WBGene00014208 [details] [associations]
symbol:ZK1067.2 species:6239 "Caenorhabditis elegans"
[GO:0008168 "methyltransferase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] GeneTree:ENSGT00700000104467
EMBL:Z70038 RefSeq:NP_001254204.1 EnsemblMetazoa:ZK1067.2b
GeneID:174463 KEGG:cel:CELE_ZK1067.2 CTD:174463 WormBase:ZK1067.2b
OMA:THIGVQI Uniprot:E9P860
Length = 2443
Score = 269 (99.8 bits), Expect = 2.1e-19, Sum P(3) = 2.1e-19
Identities = 85/343 (24%), Positives = 155/343 (45%)
Query: 420 SVNSVAIDHLVEQKRD-DSAADKQKHGATRKDRDSIR-SAILNEAVIVCSTLSFSGSALL 477
++ S+ ++L Q R+ A + K+ R D + +R + I+ CS L L
Sbjct: 1401 ALRSIVTENLPRQIREYREACENFKNAQNRVDAEIMRMTMIIGATTTGCSRLR----PTL 1456
Query: 478 SKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQL-PATVISPVAEHLGYGT 536
K+ G ++I++EAA+ +E + + + + V ++GD QL P + + G
Sbjct: 1457 EKV--GPRILIVEEAAEVLEAHIISAMISTVEHVVMIGDHKQLRPNPAVHELGVAYGLRI 1514
Query: 537 SLFKRLQRAGYPVKMLKTQYRMHPEVRS-FPSREFYDEALEDGSDVEDYTTRDWHEYRCF 595
S+F+RL G P L+ Q+RM+ + FYD + D +V Y + +
Sbjct: 1515 SMFERLVERGLPFSQLRQQHRMNLTISDKIVKLSFYDN-VTDAENVGLYP-----DVQGM 1568
Query: 596 GPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQ 655
FF H E P SW+N E+ + L L+ Q +++ + +++ Y Q
Sbjct: 1569 ATNLFFWSHTSMEESP-DEVSWLNKHEISMTVALVKHLLK---QNYTTNDIVVLATYSAQ 1624
Query: 656 VKQFQERFKETFG-VESQKVVDITTVDGCQGREKDVAIFSCVRAS----DKKSIGFLADY 710
+ FG V+ + TVD QG+E+ + I S VR+ + IGFLA
Sbjct: 1625 KNLMYREYANVFGSTPDSNVIPVETVDSFQGKERKIVIVSLVRSHRGGRENTGIGFLAVA 1684
Query: 711 RRMNVGITRAKSSILVVGCASTLREDKH-WNNLVKSAEKQDCL 752
R+ V +TRA+ + ++G + + + WN +V + + + +
Sbjct: 1685 NRICVALTRAQHGMYIIGNGAYIMNNSELWNKIVNNLRRSNLI 1727
Score = 70 (29.7 bits), Expect = 2.1e-19, Sum P(3) = 2.1e-19
Identities = 20/59 (33%), Positives = 30/59 (50%)
Query: 240 DQSW-KIPGLLHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAIL 297
++ W + LL E+ + + SQ A + LIQGPPGTGKT + ++ IL
Sbjct: 1022 NKKWYNVSRLLDEFHPDYMDESQRLAFCN-TFKYELSLIQGPPGTGKTHIGVQIVKTIL 1079
Score = 40 (19.1 bits), Expect = 2.1e-19, Sum P(3) = 2.1e-19
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 53 EVKDTYKDVDDYLATFEPLLFEEVKAQIIQKKDEE 87
E K Y + D +P FEE+K + I K E+
Sbjct: 676 EEKRKYCEEDTDAKPQQPYRFEEIKFEPIWVKCEK 710
>UNIPROTKB|G3X7G5 [details] [associations]
symbol:MOV10L1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007283 "spermatogenesis" evidence=IEA] [GO:0007281
"germ cell development" evidence=IEA] GO:GO:0007283 GO:GO:0007281
GeneTree:ENSGT00550000074391 OMA:NMSGVTL InterPro:IPR026125
PANTHER:PTHR10887:SF6 EMBL:DAAA02015125 EMBL:DAAA02015122
EMBL:DAAA02015123 EMBL:DAAA02015124 Ensembl:ENSBTAT00000027109
Uniprot:G3X7G5
Length = 1214
Score = 175 (66.7 bits), Expect = 5.5e-19, Sum P(4) = 5.5e-19
Identities = 58/203 (28%), Positives = 98/203 (48%)
Query: 550 KMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR-DWHEYRCFG-PFSFFDIHEGK 607
K++K YR H + + PSR FY LE +D + W + G P F + G
Sbjct: 970 KLVKN-YRSHSALLALPSRLFYHRELEVCADPTVVASLLGWEKLPRKGFPLIFHGVR-GN 1027
Query: 608 ESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETF 667
E++ S SW N E V+ L S+ + +I+PYR QV++ + +
Sbjct: 1028 EAREGRSPSWFNPAEAVQVMRYCCMLARSVSSQVSARDIGVITPYRKQVEKIKILLRNVD 1087
Query: 668 GVESQKVVDITTVDGCQGREKDVAIFSCVRAS------DKKSIGFLADYRRMNVGITRAK 721
++ + + +V+ QG+E V I S VR++ D+ +GFL++ +R NV ITR K
Sbjct: 1088 LMD----IKVGSVEEFQGQEYLVVIISTVRSNEDRFEDDRYFLGFLSNSKRFNVAITRPK 1143
Query: 722 SSILVVGCASTLREDKHWNNLVK 744
+ ++V+G L D + L++
Sbjct: 1144 ALLIVLGNPHVLVRDPCFGALLE 1166
Score = 106 (42.4 bits), Expect = 5.5e-19, Sum P(4) = 5.5e-19
Identities = 32/89 (35%), Positives = 44/89 (49%)
Query: 464 IVCSTLSFSGSALLSKLNHG-FDVVIIDEAAQAVEPATLVPLATGCK---QVFLVGDPVQ 519
++ +T S +G L G F V +DEA QA EP L+PL Q+ L GDP+Q
Sbjct: 862 VLITTCSSAGLFYQIGLRVGHFTHVFVDEAGQASEPECLIPLGLVSDVSGQIVLAGDPMQ 921
Query: 520 LPATVISPVAEHLGYGTSLFKRLQ-RAGY 547
L + S +A G S+ +RL R Y
Sbjct: 922 LGPVIKSRLAMAYGLNVSMLERLMSRPAY 950
Score = 77 (32.2 bits), Expect = 5.5e-19, Sum P(4) = 5.5e-19
Identities = 18/49 (36%), Positives = 26/49 (53%)
Query: 253 IKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATP 301
+ EN + + I G R ++ GPPGTGKT TI+ + + HA P
Sbjct: 748 LNENQKLA-VRRILSGDCRPIPYVLFGPPGTGKTVTIIEAILQVFHALP 795
Score = 55 (24.4 bits), Expect = 5.5e-19, Sum P(4) = 5.5e-19
Identities = 11/15 (73%), Positives = 12/15 (80%)
Query: 379 CAPSNSALDEIVLRL 393
CAPSNSA D + LRL
Sbjct: 802 CAPSNSAADLVCLRL 816
>UNIPROTKB|Q9P2E3 [details] [associations]
symbol:ZNFX1 "NFX1-type zinc finger-containing protein 1"
species:9606 "Homo sapiens" [GO:0046872 "metal ion binding"
evidence=IEA] Pathway_Interaction_DB:telomerasepathway
GO:GO:0046872 eggNOG:COG1112 EMBL:AL049766 EMBL:AB037825
EMBL:AK000573 EMBL:AK002139 EMBL:AK022641 EMBL:AK023836
IPI:IPI00165981 IPI:IPI00220462 RefSeq:NP_066363.1
UniGene:Hs.371794 ProteinModelPortal:Q9P2E3 SMR:Q9P2E3
IntAct:Q9P2E3 STRING:Q9P2E3 PhosphoSite:Q9P2E3 DMDM:23821814
PaxDb:Q9P2E3 PeptideAtlas:Q9P2E3 PRIDE:Q9P2E3
Ensembl:ENST00000371752 Ensembl:ENST00000396105 GeneID:57169
KEGG:hsa:57169 UCSC:uc002xui.3 CTD:57169 GeneCards:GC20M047854
HGNC:HGNC:29271 HPA:HPA046629 neXtProt:NX_Q9P2E3
PharmGKB:PA143485687 HOVERGEN:HBG052201 InParanoid:Q9P2E3
OMA:CVRLCSE PhylomeDB:Q9P2E3 ChiTaRS:ZNFX1 GenomeRNAi:57169
NextBio:63185 ArrayExpress:Q9P2E3 Bgee:Q9P2E3 CleanEx:HS_ZNFX1
Genevestigator:Q9P2E3 GermOnline:ENSG00000124201 Uniprot:Q9P2E3
Length = 1918
Score = 235 (87.8 bits), Expect = 8.4e-19, Sum P(2) = 8.4e-19
Identities = 79/297 (26%), Positives = 139/297 (46%)
Query: 458 ILNEAVIVCSTLSFSGSALLSKLNHGFD--VVIIDEAAQAVEPATLVPLATGCKQVFLVG 515
IL +A +V T + G+A ++ + +VI++EAA+ +E T+ L+ C+ + L+G
Sbjct: 974 ILKDAQVVGMTTT--GAAKYRQILQKVEPRIVIVEEAAEVLEAHTIATLSKACQHLILIG 1031
Query: 516 DPVQL-PATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEA 574
D QL P+ + +A++ SLF+RL + P L Q+RM PE+ + Y +
Sbjct: 1032 DHQQLRPSANVYDLAKNFNLEVSLFERLVKVNIPFVRLNYQHRMCPEIARLLTPHIYQD- 1090
Query: 575 LEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLI 634
LE+ V Y + + FF H E + S N E FV+ L +
Sbjct: 1091 LENHPSVLKY-----EKIKGVSSNLFFVEHNFPEQEIQEGKSHQNQHEAHFVVELCKYFL 1145
Query: 635 SMYPQLKSSSQLAIISPYRHQVKQFQERFK-ETFGVESQKVVDITTVDGCQGREKDVAIF 693
Q SQ+ I++ Y Q+ ++ +TF V + VD QG E D+ +
Sbjct: 1146 C---QEYLPSQITILTTYTGQLFCLRKLMPAKTFAG-----VRVHVVDKYQGEENDIILL 1197
Query: 694 SCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQD 750
S VR++ + +GFL R+ V ++RAK + +G L + W+ ++ + + +
Sbjct: 1198 SLVRSNQEGKVGFLQISNRICVALSRAKKGMYCIGNMQMLAKVPLWSKIIHTLRENN 1254
Score = 87 (35.7 bits), Expect = 8.4e-19, Sum P(2) = 8.4e-19
Identities = 19/38 (50%), Positives = 26/38 (68%)
Query: 260 SQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAIL 297
SQ+EA+ L R+ +IQGPPGTGKT L ++ A+L
Sbjct: 601 SQMEALQFALTRE-LAIIQGPPGTGKTYVGLKIVQALL 637
>CGD|CAL0006154 [details] [associations]
symbol:orf19.6199 species:5476 "Candida albicans" [GO:0043141
"ATP-dependent 5'-3' DNA helicase activity" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005658 "alpha DNA
polymerase:primase complex" evidence=IEA] [GO:0033203 "DNA helicase
A complex" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003593 InterPro:IPR004483 SMART:SM00382
CGD:CAL0006154 GO:GO:0005524 GO:GO:0003677 GO:GO:0017111
eggNOG:COG1112 InterPro:IPR014001 SMART:SM00487 EMBL:AACQ01000038
EMBL:AACQ01000037 TIGRFAMs:TIGR00376 RefSeq:XP_718706.1
RefSeq:XP_718790.1 ProteinModelPortal:Q5AAW1 STRING:Q5AAW1
GeneID:3639532 GeneID:3639630 KEGG:cal:CaO19.13579
KEGG:cal:CaO19.6199 Uniprot:Q5AAW1
Length = 719
Score = 217 (81.4 bits), Expect = 9.5e-19, Sum P(3) = 9.5e-19
Identities = 66/246 (26%), Positives = 116/246 (47%)
Query: 536 TSLFKRLQRAGYPVK---MLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEY 592
T+LF RL + + K +L QYRM+ + FPS + YD L+ V + + D
Sbjct: 469 TTLFDRLMKHCHGEKYKKLLDVQYRMNKSIMQFPSMQLYDNQLKCDDSVREISLVDLPGV 528
Query: 593 RC----FGPFSFFDIHEGK--ESQPAGSGSWINIDEVDFVLLLFH--KLISMYPQLKSSS 644
++D G+ E ++++ +++ H KL+S Q
Sbjct: 529 EINDDTMTKCIWYDTQGGEFPEQISESIDGDSKYNDMELLVVKGHIKKLLSSGVQ---PQ 585
Query: 645 QLAIISPYRHQVKQFQERFK------ETFGVESQKVVDITTVDGCQGREKDVAIFSCVRA 698
+ +I+PY QV+ +++ + + ++I+TVDG QGREK+V I + VR+
Sbjct: 586 DIGVIAPYSAQVQNLKKQMGLGGEVGSSANGDKDGQIEISTVDGFQGREKEVIILTLVRS 645
Query: 699 SDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLRED-----KHWNNLVKSAEKQ-DCL 752
+D + IGFL++ RR+NV +TR K + VVG + + + W+ V+ D +
Sbjct: 646 NDSREIGFLSEQRRLNVAMTRPKRQLCVVGDLELMNQSGNKFLQSWSKFVEDGNNDGDVI 705
Query: 753 FRVSKP 758
F + P
Sbjct: 706 FEIEYP 711
Score = 158 (60.7 bits), Expect = 2.5e-12, Sum P(3) = 2.5e-12
Identities = 52/163 (31%), Positives = 80/163 (49%)
Query: 448 RKDRDSIRSAILNEAVIVCSTLSFSGSALLSKL-----NHG--FDVVIIDEAAQAVEPAT 500
R+ I + +L +A +V +TL SGS L N G FD +IIDE +Q++EP
Sbjct: 362 RQRERKIVNELLVQAQVVVATLHGSGSYELKNSVGTNNNEGIVFDTIIIDEVSQSLEPQC 421
Query: 501 LVPL--ATGCKQVFLVGDPVQLPATV-------ISPVAEHLG---YGTSLFKRLQRAGYP 548
+PL + K++ + GD +QLP T+ SP + T+LF RL + +
Sbjct: 422 WIPLLLSNRFKRLVIAGDNMQLPPTIKTQKSNSSSPSSSSSSASILATTLFDRLMKHCHG 481
Query: 549 VK---MLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRD 588
K +L QYRM+ + FPS + YD L+ V + + D
Sbjct: 482 EKYKKLLDVQYRMNKSIMQFPSMQLYDNQLKCDDSVREISLVD 524
Score = 93 (37.8 bits), Expect = 9.5e-19, Sum P(3) = 9.5e-19
Identities = 33/136 (24%), Positives = 64/136 (47%)
Query: 166 EVIHINKD-AVKSQRLLNIHSLITSSVSA-VEKRLFSLKICSLSTIAREYLALRSVGSLP 223
+ I I+ D + ++L ++ S + K S+ + T + LA++
Sbjct: 130 QTISISVDESTDDSKILQYYNNTNDSARMWLVKLTNSITYKRMITTMDKVLAMKESDKND 189
Query: 224 FKDLILSASE---KSSGSQDQSWKIPGLLHEYIKENHNASQLEAIHEGLLRKAFVLIQGP 280
++L S+ KS+G+ + + G ++ + + NASQ +AI + +I GP
Sbjct: 190 IHKILLGESQYIPKSNGTSNNN---NGEIN-FFNDKLNASQRQAIDFAINDSNITIIHGP 245
Query: 281 PGTGKTQTILGLLSAI 296
PGTGKT T++ L+ +
Sbjct: 246 PGTGKTYTLIELIQQL 261
Score = 45 (20.9 bits), Expect = 9.5e-19, Sum P(3) = 9.5e-19
Identities = 16/37 (43%), Positives = 22/37 (59%)
Query: 379 CAPSNSALDEIVLRLLNTGIRDENIRSYTP-KIVRIG 414
C PSN ++D I+ RL G D+ Y P K++RIG
Sbjct: 271 CGPSNISVDTILERL---G--DK----YEPMKLIRIG 298
>UNIPROTKB|Q5AAW1 [details] [associations]
symbol:HCS1 "Putative uncharacterized protein HCS1"
species:237561 "Candida albicans SC5314" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003593
InterPro:IPR004483 SMART:SM00382 CGD:CAL0006154 GO:GO:0005524
GO:GO:0003677 GO:GO:0017111 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 EMBL:AACQ01000038 EMBL:AACQ01000037
TIGRFAMs:TIGR00376 RefSeq:XP_718706.1 RefSeq:XP_718790.1
ProteinModelPortal:Q5AAW1 STRING:Q5AAW1 GeneID:3639532
GeneID:3639630 KEGG:cal:CaO19.13579 KEGG:cal:CaO19.6199
Uniprot:Q5AAW1
Length = 719
Score = 217 (81.4 bits), Expect = 9.5e-19, Sum P(3) = 9.5e-19
Identities = 66/246 (26%), Positives = 116/246 (47%)
Query: 536 TSLFKRLQRAGYPVK---MLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEY 592
T+LF RL + + K +L QYRM+ + FPS + YD L+ V + + D
Sbjct: 469 TTLFDRLMKHCHGEKYKKLLDVQYRMNKSIMQFPSMQLYDNQLKCDDSVREISLVDLPGV 528
Query: 593 RC----FGPFSFFDIHEGK--ESQPAGSGSWINIDEVDFVLLLFH--KLISMYPQLKSSS 644
++D G+ E ++++ +++ H KL+S Q
Sbjct: 529 EINDDTMTKCIWYDTQGGEFPEQISESIDGDSKYNDMELLVVKGHIKKLLSSGVQ---PQ 585
Query: 645 QLAIISPYRHQVKQFQERFK------ETFGVESQKVVDITTVDGCQGREKDVAIFSCVRA 698
+ +I+PY QV+ +++ + + ++I+TVDG QGREK+V I + VR+
Sbjct: 586 DIGVIAPYSAQVQNLKKQMGLGGEVGSSANGDKDGQIEISTVDGFQGREKEVIILTLVRS 645
Query: 699 SDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLRED-----KHWNNLVKSAEKQ-DCL 752
+D + IGFL++ RR+NV +TR K + VVG + + + W+ V+ D +
Sbjct: 646 NDSREIGFLSEQRRLNVAMTRPKRQLCVVGDLELMNQSGNKFLQSWSKFVEDGNNDGDVI 705
Query: 753 FRVSKP 758
F + P
Sbjct: 706 FEIEYP 711
Score = 158 (60.7 bits), Expect = 2.5e-12, Sum P(3) = 2.5e-12
Identities = 52/163 (31%), Positives = 80/163 (49%)
Query: 448 RKDRDSIRSAILNEAVIVCSTLSFSGSALLSKL-----NHG--FDVVIIDEAAQAVEPAT 500
R+ I + +L +A +V +TL SGS L N G FD +IIDE +Q++EP
Sbjct: 362 RQRERKIVNELLVQAQVVVATLHGSGSYELKNSVGTNNNEGIVFDTIIIDEVSQSLEPQC 421
Query: 501 LVPL--ATGCKQVFLVGDPVQLPATV-------ISPVAEHLG---YGTSLFKRLQRAGYP 548
+PL + K++ + GD +QLP T+ SP + T+LF RL + +
Sbjct: 422 WIPLLLSNRFKRLVIAGDNMQLPPTIKTQKSNSSSPSSSSSSASILATTLFDRLMKHCHG 481
Query: 549 VK---MLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRD 588
K +L QYRM+ + FPS + YD L+ V + + D
Sbjct: 482 EKYKKLLDVQYRMNKSIMQFPSMQLYDNQLKCDDSVREISLVD 524
Score = 93 (37.8 bits), Expect = 9.5e-19, Sum P(3) = 9.5e-19
Identities = 33/136 (24%), Positives = 64/136 (47%)
Query: 166 EVIHINKD-AVKSQRLLNIHSLITSSVSA-VEKRLFSLKICSLSTIAREYLALRSVGSLP 223
+ I I+ D + ++L ++ S + K S+ + T + LA++
Sbjct: 130 QTISISVDESTDDSKILQYYNNTNDSARMWLVKLTNSITYKRMITTMDKVLAMKESDKND 189
Query: 224 FKDLILSASE---KSSGSQDQSWKIPGLLHEYIKENHNASQLEAIHEGLLRKAFVLIQGP 280
++L S+ KS+G+ + + G ++ + + NASQ +AI + +I GP
Sbjct: 190 IHKILLGESQYIPKSNGTSNNN---NGEIN-FFNDKLNASQRQAIDFAINDSNITIIHGP 245
Query: 281 PGTGKTQTILGLLSAI 296
PGTGKT T++ L+ +
Sbjct: 246 PGTGKTYTLIELIQQL 261
Score = 45 (20.9 bits), Expect = 9.5e-19, Sum P(3) = 9.5e-19
Identities = 16/37 (43%), Positives = 22/37 (59%)
Query: 379 CAPSNSALDEIVLRLLNTGIRDENIRSYTP-KIVRIG 414
C PSN ++D I+ RL G D+ Y P K++RIG
Sbjct: 271 CGPSNISVDTILERL---G--DK----YEPMKLIRIG 298
>MGI|MGI:1891384 [details] [associations]
symbol:Mov10l1 "Moloney leukemia virus 10-like 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007517 "muscle organ development" evidence=IDA]
[GO:0008283 "cell proliferation" evidence=IDA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0045786 "negative regulation
of cell cycle" evidence=IDA] MGI:MGI:1891384 GO:GO:0005524
GO:GO:0005737 GO:GO:0008283 GO:GO:0007283 GO:GO:0007517
GO:GO:0004386 eggNOG:COG1112 GO:GO:0045786 CTD:54456
HOVERGEN:HBG052382 KO:K13983 InterPro:IPR026125
PANTHER:PTHR10887:SF6 EMBL:AF285587 EMBL:AF340211 EMBL:AY303754
EMBL:AK084786 IPI:IPI00118099 IPI:IPI00227971 IPI:IPI00453884
RefSeq:NP_112550.2 UniGene:Mm.358791 ProteinModelPortal:Q99MV5
SMR:Q99MV5 STRING:Q99MV5 PhosphoSite:Q99MV5 PaxDb:Q99MV5
PRIDE:Q99MV5 DNASU:83456 GeneID:83456 KEGG:mmu:83456
HOGENOM:HOG000015363 InParanoid:Q99MV5 NextBio:350584
CleanEx:MM_MOV10L1 Genevestigator:Q99MV5
GermOnline:ENSMUSG00000015365 Uniprot:Q99MV5
Length = 1187
Score = 176 (67.0 bits), Expect = 1.5e-18, Sum P(5) = 1.5e-18
Identities = 57/203 (28%), Positives = 99/203 (48%)
Query: 550 KMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR-DWHEYRCFG-PFSFFDIHEGK 607
K++K YR H + + PSR FY LE +D + T+ W + G P F + G
Sbjct: 969 KLVKN-YRSHSALLALPSRLFYHRELEVCADPKVVTSLLGWEKLPRKGFPLIFHGVR-GN 1026
Query: 608 ESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETF 667
E++ S SW + E V+ L SS + +I+PYR QV++ + +
Sbjct: 1027 EAREGRSPSWFSPAEAVQVMRYCCLLARSVSSQVSSKDIGVITPYRKQVEKIKILLRNVD 1086
Query: 668 GVESQKVVDITTVDGCQGREKDVAIFSCVRAS------DKKSIGFLADYRRMNVGITRAK 721
+ + + +V+ QG+E V + S VR++ D+ +GFL++ +R NV ITR K
Sbjct: 1087 LTD----IKVGSVEEFQGQEYLVIVISTVRSNEDRFEDDRYFLGFLSNSKRFNVAITRPK 1142
Query: 722 SSILVVGCASTLREDKHWNNLVK 744
+ ++++G L D + L++
Sbjct: 1143 ALLIILGNPHVLVRDPCFGALLE 1165
Score = 105 (42.0 bits), Expect = 1.5e-18, Sum P(5) = 1.5e-18
Identities = 32/89 (35%), Positives = 44/89 (49%)
Query: 464 IVCSTLSFSGSALLSKLNHG-FDVVIIDEAAQAVEPATLVPLATGCK---QVFLVGDPVQ 519
I+ +T S +G + G F V +DEA QA EP L+PL Q+ L GDP+Q
Sbjct: 861 IIITTCSSAGLFYQIGVRVGYFTHVFVDEAGQASEPECLIPLGLISDINGQIVLAGDPMQ 920
Query: 520 LPATVISPVAEHLGYGTSLFKRLQ-RAGY 547
L + S +A G S+ +RL R Y
Sbjct: 921 LGPVIKSRLAMAYGLNVSMLERLMSRPAY 949
Score = 71 (30.1 bits), Expect = 1.5e-18, Sum P(5) = 1.5e-18
Identities = 23/85 (27%), Positives = 37/85 (43%)
Query: 217 RSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIKENHNASQLEAIHEGLLRKAFVL 276
R VG+ + S +E Q + + + EN + + I G R +
Sbjct: 711 RHVGTTDQPEKASSTAETMDEIQIPKARDKEFFNPVLNENQKLA-VRRILSGDCRPLPYI 769
Query: 277 IQGPPGTGKTQTILGLLSAILHATP 301
+ GPPGTGKT TI+ + + +A P
Sbjct: 770 LFGPPGTGKTVTIIEAVLQVHYALP 794
Score = 55 (24.4 bits), Expect = 1.5e-18, Sum P(5) = 1.5e-18
Identities = 11/15 (73%), Positives = 12/15 (80%)
Query: 379 CAPSNSALDEIVLRL 393
CAPSNSA D + LRL
Sbjct: 801 CAPSNSAADLVCLRL 815
Score = 42 (19.8 bits), Expect = 1.5e-18, Sum P(5) = 1.5e-18
Identities = 12/44 (27%), Positives = 26/44 (59%)
Query: 166 EVIHINKDAVKSQRLLNIHSLITSSV--SAVEKRLFSLKICSLS 207
++I+ + DAV S LLN+ + + V + V L ++++ ++S
Sbjct: 4 DLIYFSNDAVTSTVLLNVGQEVIAVVEENKVSNGLKAIRVEAVS 47
>FB|FBgn0033889 [details] [associations]
symbol:CG6701 species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR007087 InterPro:IPR015880
PROSITE:PS00028 SMART:SM00355 GO:GO:0008270 GO:GO:0005622
FlyBase:FBgn0033889 ChiTaRS:CG6701 EMBL:AY128442
ProteinModelPortal:Q8MQQ9 STRING:Q8MQQ9 PRIDE:Q8MQQ9
InParanoid:Q8MQQ9 ArrayExpress:Q8MQQ9 Bgee:Q8MQQ9 Uniprot:Q8MQQ9
Length = 1261
Score = 243 (90.6 bits), Expect = 1.9e-18, Sum P(2) = 1.9e-18
Identities = 111/430 (25%), Positives = 194/430 (45%)
Query: 380 APSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQKRDDSAA 439
A SN+A DE+ LRLL + +S + RI S N D ++ DD
Sbjct: 595 AGSNTACDEVALRLLRAIAKAP--QSQPRPLTRI-----FSANC---DRRIDNI-DDLLL 643
Query: 440 DKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKL--NHGFDVVIIDEAAQAVE 497
+ + T +++ A+ +++C TLS +G N+ + V +DEAA + E
Sbjct: 644 E-YSNMYTVHFYPAVQ-AVHQYRIVIC-TLSLAGKLSTGGFAANNVYTHVFVDEAAASTE 700
Query: 498 PATLVPLATGCK---QVFLVGDPVQLPATVISPVAEHLGYGTSLFKRL-QRAGYPVK--- 550
L+ + + L GD QL + S A G G +LF+RL QR Y V+
Sbjct: 701 AEVLMGITCTLSPTLNLILSGDHKQLGPVLQSQRANEWGLGLTLFERLLQRKCYQVEEDG 760
Query: 551 ----MLKTQ----YRMHPEVRSFPSREFYDEALEDGSDVEDYTT-RDWHEY-RCFGPFSF 600
++T+ +R HPE+ S + +Y+ L + +E +W P F
Sbjct: 761 SYNASVQTRLIRNFRSHPEIVSLYNNMYYEGHLRTEAPMEIVCRFHNWFYLPNATFPIMF 820
Query: 601 FDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLI--SMYPQLKSSSQLAIISPYRHQVKQ 658
+ G S S N E+D V+ L+ + + + + IISPY++Q ++
Sbjct: 821 HSVF-GTTMNTKSSVSLCNNKEIDVVMDYVKDLMYFGLNGEKLLQTDIGIISPYKNQYQR 879
Query: 659 FQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGIT 718
QE+ + + +D +V+ QG+EK V I S VR+ K +GFL + RR+NV ++
Sbjct: 880 IQEQLN----MRNWSQIDCGSVELFQGKEKHVIIVSFVRSFTPK-LGFLNNERRLNVLLS 934
Query: 719 RAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRVSKPYASFFSDENLESMRKNATTD 778
R S ++++G TL ++ + ++++ + L V + Y +++ + + + A
Sbjct: 935 RPISLLILIGNPRTLSQNSDFQHIIEMCRNRKTL--VGEQY---LNEDFITNKKTGANNV 989
Query: 779 NVQGADGHVP 788
N GA G P
Sbjct: 990 NKGGAAGDQP 999
Score = 71 (30.1 bits), Expect = 1.9e-18, Sum P(2) = 1.9e-18
Identities = 16/36 (44%), Positives = 23/36 (63%)
Query: 258 NASQLEAIHEGLLR---KAFVLIQGPPGTGKTQTIL 290
N Q++A+ + L KA ++ GPPGTGKT TI+
Sbjct: 541 NPEQMQAVRQIALSPRLKAPYIVFGPPGTGKTSTIV 576
>POMBASE|SPCC1739.03 [details] [associations]
symbol:hrr1 "Helicase Required for RNAi-mediated
heterochromatin assembly Hrr1" species:4896 "Schizosaccharomyces
pombe" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=NAS] [GO:0030702
"chromatin silencing at centromere" evidence=IMP] [GO:0031048
"chromatin silencing by small RNA" evidence=IMP] [GO:0031379
"RNA-directed RNA polymerase complex" evidence=IDA] [GO:0031380
"nuclear RNA-directed RNA polymerase complex" evidence=IDA]
PomBase:SPCC1739.03 GO:GO:0005829 GO:GO:0005524 GO:GO:0007059
EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0003723 GO:GO:0006338
GO:GO:0007049 GO:GO:0030702 GO:GO:0004386 GO:GO:0031048
eggNOG:COG1112 GO:GO:0016585 GO:GO:0031380 PIR:T41111
RefSeq:NP_588411.2 DIP:DIP-29303N STRING:O74465
EnsemblFungi:SPCC1739.03.1 GeneID:2539248 OrthoDB:EOG4DRDMD
NextBio:20800418 Uniprot:O74465
Length = 999
Score = 215 (80.7 bits), Expect = 3.6e-18, Sum P(4) = 3.6e-18
Identities = 84/304 (27%), Positives = 135/304 (44%)
Query: 440 DKQKHGATRKDRDSIRSAILNEA--VIVCSTLSFSGSA-LLSKLNHGFDVVIIDEAAQAV 496
D+++ G + K R+AIL VI +T + +L ++N + I+EAA +
Sbjct: 665 DRERIGFSNK-----RAAILLRGANVIGMTTTGLNKYRDILERINP--KICFIEEAADVL 717
Query: 497 EPATLVPLATGCKQVFLVGDPVQL-PATVISPVAEH-LGYGTSLFKRLQRAGYPVKMLKT 554
E + + +Q+ L+GD QL P + + S+F+RL L
Sbjct: 718 EGPIIPAVFPSLEQLVLIGDHKQLRPGCSTYALRQDPFNLSISMFERLVENDMEYTRLTM 777
Query: 555 QYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFS-FFDIHEGKESQPAG 613
Q RMHP++R S + ED SD E T+ W G FF H E G
Sbjct: 778 QRRMHPQIRRLVSSVY-----EDLSDYE--ITKYWPSIPGMGEIRRFFLTHSRIEDND-G 829
Query: 614 SGSWINIDEVDFVLLLFHKLIS--MYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVES 671
S IN+ E ++ LI+ + PQ ++ ++ Y Q + E+ E
Sbjct: 830 FASKINLFEAQMLVQFAVYLINNGVEPQ-----KITCLTFYAAQKDLIERLLSESLNREK 884
Query: 672 QKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCAS 731
+ + TVDG QG E DV + S VR +D+ +GFL+ R+ V ++RA+ + + G A
Sbjct: 885 H-FIKVATVDGYQGEENDVVLLSLVRNNDRTEVGFLSSPHRVCVSLSRARRGLFIFGNAQ 943
Query: 732 TLRE 735
+ E
Sbjct: 944 LVAE 947
Score = 89 (36.4 bits), Expect = 3.6e-18, Sum P(4) = 3.6e-18
Identities = 22/54 (40%), Positives = 33/54 (61%)
Query: 251 EYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARV 304
EYI ++ SQL+A ++ +L K +IQGPPGTGK+ L + +L T + V
Sbjct: 369 EYILDS---SQLKA-YQSMLTKRLSIIQGPPGTGKSFVTLKAIETLLENTHSHV 418
Score = 57 (25.1 bits), Expect = 3.6e-18, Sum P(4) = 3.6e-18
Identities = 16/46 (34%), Positives = 28/46 (60%)
Query: 382 SNSALDEIVLRLLNTGIRDENIRSYT--PKIVRIGL--KAHHSVNS 423
+N A+D+I++RLL+ G + S T P+I + + KA H+ +S
Sbjct: 427 TNHAVDQILIRLLHQGASVMRLGSRTKDPEIAAVTIFQKAKHTKHS 472
Score = 40 (19.1 bits), Expect = 1.1e-11, Sum P(3) = 1.1e-11
Identities = 14/45 (31%), Positives = 23/45 (51%)
Query: 91 EWKLRLVMECGEADGFHLPSVTYEADEVESISPNDLLLLSKEEFK 135
EW + V E GE L S+ +VE I+P+++ +EE +
Sbjct: 527 EW-ISSVAENGEKTEEELISIWLGDAKVELITPSEITDGFEEELQ 570
Score = 37 (18.1 bits), Expect = 3.6e-18, Sum P(4) = 3.6e-18
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 58 YKDVDDYLATFEPLLFEE 75
YK +DYL+ LL E+
Sbjct: 158 YKSFEDYLSIHYRLLRED 175
Score = 37 (18.1 bits), Expect = 3.7e-16, Sum P(4) = 3.7e-16
Identities = 8/47 (17%), Positives = 23/47 (48%)
Query: 393 LLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQKRDDSAA 439
L++ + D + TP + G + ++ ++ ++++ +DS A
Sbjct: 543 LISIWLGDAKVELITPSEITDGFEEELQIDPEKLEE-IQKEAEDSGA 588
>UNIPROTKB|Q0V8H6 [details] [associations]
symbol:MOV10 "Putative helicase MOV-10" species:9913 "Bos
taurus" [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] GO:GO:0005524 GO:GO:0003723 GO:GO:0004386
GO:GO:0000932 GO:GO:0035279 eggNOG:COG1112 InterPro:IPR026122
PANTHER:PTHR10887:SF17 GeneTree:ENSGT00550000074391
HOGENOM:HOG000239755 OrthoDB:EOG4SXNC4 EMBL:BT026242 EMBL:BC148151
IPI:IPI00691419 RefSeq:NP_001069307.1 UniGene:Bt.2939
ProteinModelPortal:Q0V8H6 STRING:Q0V8H6 Ensembl:ENSBTAT00000018997
GeneID:523206 KEGG:bta:523206 CTD:4343 InParanoid:Q0V8H6
OMA:VRFFKLD NextBio:20873687 Uniprot:Q0V8H6
Length = 1003
Score = 228 (85.3 bits), Expect = 3.6e-18, Sum P(3) = 3.6e-18
Identities = 81/262 (30%), Positives = 128/262 (48%)
Query: 510 QVFLVGDPVQLPATVISPVAEHLGYGTSLFKRL-------QRA--GY-P---VKMLKTQY 556
Q+ L GDP QL + P+ + G G SL +RL ++ GY P K+L+ Y
Sbjct: 674 QLVLAGDPRQLGPVLRCPLTQKHGLGYSLLERLLTFNALYKKGPDGYNPQFITKLLRN-Y 732
Query: 557 RMHPEVRSFPSREFYDEALEDGSDVEDYTTR-DWHEY-RCFGPFSFFDIHEGKESQPAGS 614
R HP + P+R +YD L+ +DV D W R P F + GK+ + S
Sbjct: 733 RSHPTILDVPNRLYYDGELQACADVVDRERFCRWEGLPRQDFPIIFHGVM-GKDEREGNS 791
Query: 615 GSWINIDEVDFVLLLFHKLISMYPQLK------SSSQLAIISPYRHQVKQFQ----ERFK 664
S+ N +E V +L++ P K S + +ISPYR QV++ + + K
Sbjct: 792 PSFFNPEEAATVTSYLKQLLA--PSSKKGKARLSPRSVGVISPYRKQVEKIRYCITKLDK 849
Query: 665 ETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKK-------SIGFLADYRRMNVGI 717
+ G++ K + + +V+ QG+E+ V + S VR+S ++GFL + +R NV +
Sbjct: 850 QLRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQSFVQLDLDFNLGFLKNPKRFNVAV 909
Query: 718 TRAKSSILVVGCASTLREDKHW 739
TRAK+ ++VVG L D W
Sbjct: 910 TRAKALLIVVGNPLLLGHDPDW 931
Score = 93 (37.8 bits), Expect = 0.00072, Sum P(3) = 0.00072
Identities = 33/96 (34%), Positives = 50/96 (52%)
Query: 459 LNEAVIVCSTLSFSGSALLSK---LNHGFDVVIIDEAAQAVEPATLVPLATGCK------ 509
L E ++ +TL + S L+S ++H F + IDEA A+EP +LV +A +
Sbjct: 613 LQEYRVLITTL-ITASRLVSAQFPIDH-FTHIFIDEAGHAMEPESLVAIAGLMEVKEADN 670
Query: 510 ---QVFLVGDPVQLPATVISPVAEHLGYGTSLFKRL 542
Q+ L GDP QL + P+ + G G SL +RL
Sbjct: 671 PGGQLVLAGDPRQLGPVLRCPLTQKHGLGYSLLERL 706
Score = 83 (34.3 bits), Expect = 3.6e-18, Sum P(3) = 3.6e-18
Identities = 64/249 (25%), Positives = 102/249 (40%)
Query: 70 PLLFEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGFH------LPSVTYEADEVESISP 123
P E+KAQ+ Q + E KLRL++ E H L SV D ++ +P
Sbjct: 317 PKEIAEIKAQL-QTTLKWRNYEVKLRLLLHLEELQMEHDIRHYDLESVPMTWDPIDR-NP 374
Query: 124 NDLLLLSKEEFKEG--STFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLL 181
LL L E S + FAL+ + + Y G V + D VK
Sbjct: 375 R-LLTLEVPGVAESRPSVLRGDHLFALLSS-ETHHEDPVTY-KGFVHKVELDRVKL---- 427
Query: 182 NIHSLITSSVSA-VEKRLFSLKIC-SLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQ 239
S TS +S V+ F + + + ++ AL G P + ++ + +
Sbjct: 428 ---SFSTSLLSRFVDGLTFKVNFTFNRQPLRVQHRALELTGRWPLEPMLFPVASRGVPLL 484
Query: 240 DQSWKIPGLLHEYIKENHNASQLEAIHE---GLLRKAFVLIQGPPGTGKTQTILGLLSAI 296
K+ L++ E+ N QL+A+ G R A +I GPPGTGKT T++ + +
Sbjct: 485 PSDVKLK--LYDRSLES-NPEQLQAMKHIVMGTTRPAPYIIFGPPGTGKTVTLVEAIKQV 541
Query: 297 LHATPARVH 305
+ P + H
Sbjct: 542 VKHLP-KAH 549
Score = 44 (20.5 bits), Expect = 3.6e-18, Sum P(3) = 3.6e-18
Identities = 9/15 (60%), Positives = 10/15 (66%)
Query: 379 CAPSNSALDEIVLRL 393
CAPSNS D + RL
Sbjct: 553 CAPSNSGADLLCQRL 567
Score = 44 (20.5 bits), Expect = 3.5e-14, Sum P(3) = 3.5e-14
Identities = 11/37 (29%), Positives = 17/37 (45%)
Query: 281 PGTGKTQTILGLLSAILHATPARVHSKGGLREIKRGP 317
PG ++ LL+ I H +H K G+ +GP
Sbjct: 95 PGLEMSKHHRSLLATIFHDRAEYMHGKHGVNVEVQGP 131
>ZFIN|ZDB-GENE-091230-8 [details] [associations]
symbol:mov10a "Moloney leukemia virus 10, homolog, a"
species:7955 "Danio rerio" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 SMART:SM00382 ZFIN:ZDB-GENE-091230-8
GO:GO:0005524 GO:GO:0017111 InterPro:IPR026122
PANTHER:PTHR10887:SF17 GeneTree:ENSGT00550000074391 EMBL:CU469362
IPI:IPI00481619 RefSeq:XP_002662576.2 UniGene:Dr.155704
Ensembl:ENSDART00000064826 GeneID:566858 KEGG:dre:566858 CTD:566858
NextBio:20888414 Bgee:E7FAV9 Uniprot:E7FAV9
Length = 1001
Score = 230 (86.0 bits), Expect = 4.4e-18, Sum P(3) = 4.4e-18
Identities = 63/217 (29%), Positives = 113/217 (52%)
Query: 547 YPVKMLKTQYRMHPEVRSFPSREFYDEALED-GSDVEDYTTRDW-HEYRCFGPFSFFDIH 604
+ K+L+ YR HP + P+ FY+ L+ + +E W H R P F +
Sbjct: 740 FVTKLLRN-YRSHPAILKIPNELFYENELQVFANQMEREAFCQWEHLPRKGFPVVFHGVM 798
Query: 605 EGKESQPAGSGSWINIDEVDFVLLLFHKLISMY-----PQLKSSSQLAIISPYRHQVKQF 659
GK+ + A S S+ N+ E++ ++ + L+ P+L + + II+PYR QV++
Sbjct: 799 -GKDEREANSPSFFNVTEIEVIVNYLNNLMQTQGKKGLPKL-GPNDIGIIAPYRKQVEKI 856
Query: 660 QERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRAS------DKK-SIGFLADYRR 712
++ ++ K + + +V+ QG+E+ V I S VR+S D+ +IGFL++ +R
Sbjct: 857 RKALNTVGELKKWKDIKVGSVEEFQGQERKVIIVSTVRSSVNYVKMDQDFNIGFLSNEKR 916
Query: 713 MNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQ 749
NV +TRAK ++VVG L +D W ++ E++
Sbjct: 917 FNVAMTRAKGLLIVVGNPVILSKDPTWQKFIQYCEQE 953
Score = 163 (62.4 bits), Expect = 7.0e-11, Sum P(3) = 7.0e-11
Identities = 65/242 (26%), Positives = 108/242 (44%)
Query: 421 VNSVAIDHLVEQKRDDSAADKQ--KHGATRKDRDSI----RSAILNEAVIVCSTLSFSGS 474
V++ I L RD ++ KH + +DS + ++ ++IV TL +G
Sbjct: 588 VDAHRIYRLCAPSRDPRTVPQKLLKHSNWNEAQDSFLLPSKETLIGYSIIVV-TLVTAGR 646
Query: 475 ALLSKLNHG-FDVVIIDEAAQAVEPATLVPLA---TGCK-QVFLVGDPVQLPATVISPVA 529
+ + G F + IDEA QAVEP ++ +A K Q+ L GDP QL + SP+A
Sbjct: 647 LVSGGVAMGHFTHIFIDEAGQAVEPECIIGIAGLLDPLKGQLVLAGDPQQLGPVLRSPLA 706
Query: 530 EHLGYGTSLFKRLQRAG----------------YPVKMLKTQYRMHPEVRSFPSREFYDE 573
+ G G SL +RL + + K+L+ YR HP + P+ FY+
Sbjct: 707 QLHGLGQSLLERLMKRNALYQKSQDDNSKYDSRFVTKLLRN-YRSHPAILKIPNELFYEN 765
Query: 574 ALED-GSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHK 632
L+ + +E W G F GK+ + A S S+ N+ E++ ++ +
Sbjct: 766 ELQVFANQMEREAFCQWEHLPRKGFPVVFHGVMGKDEREANSPSFFNVTEIEVIVNYLNN 825
Query: 633 LI 634
L+
Sbjct: 826 LM 827
Score = 73 (30.8 bits), Expect = 4.4e-18, Sum P(3) = 4.4e-18
Identities = 25/73 (34%), Positives = 38/73 (52%)
Query: 228 ILSASEKSSGSQDQSWKIPGLLHEYIKE-NHNASQLEAI-H--EGLLRKAFVLIQGPPGT 283
+L S+K +G + +P L + K+ +N Q A+ H G R A LI GPPGT
Sbjct: 491 VLFPSDKDTGHSE----LPHL-SMFNKDLENNPEQKAAVQHILSGSSRPAPYLIFGPPGT 545
Query: 284 GKTQTILGLLSAI 296
GKT T++ + +
Sbjct: 546 GKTVTVVEAIKQV 558
Score = 51 (23.0 bits), Expect = 4.4e-18, Sum P(3) = 4.4e-18
Identities = 11/16 (68%), Positives = 12/16 (75%)
Query: 379 CAPSNSALDEIVLRLL 394
CAPSNSA D + RLL
Sbjct: 570 CAPSNSACDLLCERLL 585
Score = 49 (22.3 bits), Expect = 1.3e-15, Sum P(3) = 1.3e-15
Identities = 22/67 (32%), Positives = 28/67 (41%)
Query: 280 PPGTGKTQTILGLLSAILHATPARVHSKGGLREIKRGPELPMHEKYNHWGRASPWLV--G 337
PPGT K I+ L A++ GL E GPE P + K N R +V G
Sbjct: 245 PPGTAKPFCIVRELEAVVRT---------GLAETL-GPESPYNPKQNRRLRPKSKVVEEG 294
Query: 338 ANPRDNI 344
P +I
Sbjct: 295 VPPESSI 301
>UNIPROTKB|F1NWZ8 [details] [associations]
symbol:DNA2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:9031 "Gallus gallus" [GO:0000076
"DNA replication checkpoint" evidence=IEA] [GO:0000729 "DNA
double-strand break processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005760 "gamma DNA polymerase complex"
evidence=IEA] [GO:0006264 "mitochondrial DNA replication"
evidence=IEA] [GO:0006284 "base-excision repair" evidence=IEA]
[GO:0016890 "site-specific endodeoxyribonuclease activity, specific
for altered base" evidence=IEA] [GO:0017108 "5'-flap endonuclease
activity" evidence=IEA] [GO:0042645 "mitochondrial nucleoid"
evidence=IEA] [GO:0043137 "DNA replication, removal of RNA primer"
evidence=IEA] [GO:0043139 "5'-3' DNA helicase activity"
evidence=IEA] [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0043504 "mitochondrial DNA repair"
evidence=IEA] [GO:0045740 "positive regulation of DNA replication"
evidence=IEA] InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696
GO:GO:0005634 GO:GO:0006284 GO:GO:0042645 GO:GO:0016890
GO:GO:0045740 GO:GO:0017108 GO:GO:0043137 GO:GO:0005760
GO:GO:0043142 GO:GO:0043504 GO:GO:0006264 PANTHER:PTHR10887:SF14
EMBL:AADN02028013 GeneTree:ENSGT00550000074852 OMA:EHESLCH
IPI:IPI00584167 Ensembl:ENSGALT00000006429 ArrayExpress:F1NWZ8
Uniprot:F1NWZ8
Length = 1009
Score = 225 (84.3 bits), Expect = 6.5e-18, Sum P(2) = 6.5e-18
Identities = 78/241 (32%), Positives = 116/241 (48%)
Query: 484 FDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQ 543
FD I+DEA+Q +P L PL K+ LVGD QLP V + A LG SLFKRL+
Sbjct: 774 FDFCIVDEASQISQPICLGPLFCS-KRFVLVGDHQQLPPLVQNSEARDLGMSESLFKRLE 832
Query: 544 RAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDI 603
+ V L QYRM+ ++ S ++ Y+ LE GS+ T + + F D
Sbjct: 833 QNQNAVVQLTVQYRMNSKIMSLSNKLVYEGKLECGSEKVSNATANLPNLKML-KLEFADA 891
Query: 604 HEG--KES-QPAGSGSWINIDEVDF--------VLLLFH-KLISMYPQL--KSS---SQL 646
+ KE +P ++N ++V V + KL+ L K+ S +
Sbjct: 892 SKTWLKEVLEPDKPVCFLNTEKVPAPEHTEKGGVCNVTEAKLVFFLTTLFIKAGCRPSDI 951
Query: 647 AIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGF 706
IISPYRHQ+K + + V++ T+D QGR+K + I S VR S+ +++G
Sbjct: 952 GIISPYRHQLKVITDLMARL----KENRVEVNTIDKYQGRDKSIIIVSFVRNSNDENLGA 1007
Query: 707 L 707
L
Sbjct: 1008 L 1008
Score = 82 (33.9 bits), Expect = 6.5e-18, Sum P(2) = 6.5e-18
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 253 IKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHA 299
+K + N Q +A+ + LL + + LI G PGTGKT TI L+ IL A
Sbjct: 640 LKGSLNKPQKQAMKQVLLSRDYTLIVGMPGTGKTTTICALVR-ILSA 685
>DICTYBASE|DDB_G0274777 [details] [associations]
symbol:DDB_G0274777 "DNA replication helicase"
species:44689 "Dictyostelium discoideum" [GO:0006261 "DNA-dependent
DNA replication" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR014808
dictyBase:DDB_G0274777 Pfam:PF08696 GO:GO:0005634 GO:GO:0006261
EMBL:AAFI02000012 GO:GO:0004003 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 KO:K10742 RefSeq:XP_643888.1
ProteinModelPortal:Q86IV6 EnsemblProtists:DDB0233088 GeneID:8619314
KEGG:ddi:DDB_G0274777 InParanoid:Q86IV6 Uniprot:Q86IV6
Length = 1838
Score = 144 (55.7 bits), Expect = 6.7e-18, Sum P(4) = 6.7e-18
Identities = 29/60 (48%), Positives = 42/60 (70%)
Query: 675 VDITTVDGCQGREKDVAIFSCVRASDKKSIG-FLADYRRMNVGITRAKSSILVVGCASTL 733
+DI T+D QG++KD I S VR+++KK IG + D++RMNV TRAK ++ VG S+L
Sbjct: 1751 LDILTIDKFQGKDKDCIIISFVRSNEKKEIGELIKDWKRMNVAFTRAKKKLIFVGSKSSL 1810
Score = 136 (52.9 bits), Expect = 6.7e-18, Sum P(4) = 6.7e-18
Identities = 46/142 (32%), Positives = 68/142 (47%)
Query: 440 DKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPA 499
+KQ G + + + + ++ S L + LL K+ FD IIDEA+ +P
Sbjct: 1414 EKQSFGNITQSKQYLE----RQQLVATSCLGINHQCLL-KMQ--FDYCIIDEASILSQPI 1466
Query: 500 TLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYP--VKMLKTQYR 557
++ P+ CK LVGD QLP V + A LG SLFK+L + +P V L QYR
Sbjct: 1467 SMGPILK-CKSFVLVGDHHQLPPIVNNKEAGKLGLDISLFKQLSTS-HPSSVSNLYHQYR 1524
Query: 558 MHPEVRSFPSREFYDEALEDGS 579
M + S + Y+ L G+
Sbjct: 1525 MCNSIMSLSNHLIYNNRLVCGN 1546
Score = 78 (32.5 bits), Expect = 6.7e-18, Sum P(4) = 6.7e-18
Identities = 33/105 (31%), Positives = 48/105 (45%)
Query: 189 SSVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGL 248
S +S V+ LF+L + +E LRS+ DL +K Q+ WK
Sbjct: 1269 SGLSIVKSNLFNLFL-------KENQKLRSL----IVDLEAPIFDKLE--QENYWKSIDF 1315
Query: 249 LHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLL 293
++Y N Q AI + L K + LI G PGTGKT ++ L+
Sbjct: 1316 QNDY--PLLNIDQRNAIIKTLSAKDYSLIHGMPGTGKTTLVISLI 1358
Score = 54 (24.1 bits), Expect = 6.7e-18, Sum P(4) = 6.7e-18
Identities = 24/97 (24%), Positives = 47/97 (48%)
Query: 580 DVEDYTTRDWHEYRCFGPFS---FFDIHEGKESQPAGSGS-WINIDEVDFVLLLFHKLIS 635
D+ D+ +W + C P S F + + S + +G + N E + V +L + LI+
Sbjct: 1569 DLLDHIN-NWPQIIC-NPNSSVIFVNTDQLNNSTESSNGDLFYNQTEANIVAILTNCLIN 1626
Query: 636 MYPQLK-SSSQLAIISPYRHQVKQFQERFKETFGVES 671
+L + SQ+ II+P R Q+ ++ + +E+
Sbjct: 1627 ---KLNINQSQIGIITPIRFQLNFIKKSILKYLSIEN 1660
Score = 42 (19.8 bits), Expect = 1.4e-07, Sum P(3) = 1.4e-07
Identities = 12/41 (29%), Positives = 20/41 (48%)
Query: 623 VDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERF 663
+D +LL F+K L+ +S L I P H+ ++ F
Sbjct: 1378 LDHLLLKFNKQYPNIEMLRVASSLNQIDPSLHRFTLEKQSF 1418
>UNIPROTKB|G4MK85 [details] [associations]
symbol:MGG_02491 "DNA replication ATP-dependent helicase
dna2" species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696
GO:GO:0004386 EMBL:CM001231 GO:GO:0017108 GO:GO:0043142
GO:GO:0033567 PANTHER:PTHR10887:SF14 KO:K10742 InterPro:IPR022765
Pfam:PF01930 RefSeq:XP_003709288.1 ProteinModelPortal:G4MK85
EnsemblFungi:MGG_02491T0 GeneID:2681588 KEGG:mgr:MGG_02491
Uniprot:G4MK85
Length = 1689
Score = 159 (61.0 bits), Expect = 7.8e-18, Sum P(4) = 7.8e-18
Identities = 41/130 (31%), Positives = 71/130 (54%)
Query: 608 ESQPAGSGSWI-NIDEVDFVLLLFHKLISM-YPQLKSSSQLAIISPYRHQVKQFQERFKE 665
+S+ G+ I N E V+ L L+++ P ++++ +++ YR Q+ + +
Sbjct: 1443 DSREEAKGNRIVNPVEAQLVVQLVESLMTLGVP----ANEIGVMTHYRSQLALLKHKLLR 1498
Query: 666 TFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIG-FLADYRRMNVGITRAKSSI 724
V++ T D QGR+K+V + S VR+++ IG L D+RR+NV TRAK+ +
Sbjct: 1499 GKNTGDATAVEMHTADRFQGRDKEVVVLSLVRSNEACHIGDLLRDWRRINVAFTRAKTKL 1558
Query: 725 LVVGCASTLR 734
LV+G TLR
Sbjct: 1559 LVIGSRETLR 1568
Score = 119 (46.9 bits), Expect = 7.8e-18, Sum P(4) = 7.8e-18
Identities = 43/131 (32%), Positives = 64/131 (48%)
Query: 452 DSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQV 511
+ IR+A + V+ + L S L ++ FD I+DEA+Q P L P+ +
Sbjct: 1248 EEIRTAWHDLPVVATTCLGIS-HPLFNERT--FDYCIVDEASQITLPICLGPIRMA-RTF 1303
Query: 512 FLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYP--VKMLKTQYRMHPEVRSFPSRE 569
LVGD QLP V + A G SLFK L +P V L+ QYRM +V + +
Sbjct: 1304 VLVGDHNQLPPLVQNEEARKGGLDVSLFKLLSDT-HPDSVVNLEHQYRMCEDVMALSNEL 1362
Query: 570 FYDEALEDGSD 580
Y+ L+ G++
Sbjct: 1363 IYEGHLKCGTE 1373
Score = 82 (33.9 bits), Expect = 7.8e-18, Sum P(4) = 7.8e-18
Identities = 16/43 (37%), Positives = 27/43 (62%)
Query: 255 ENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAIL 297
E+ N Q +A+ + + K + L+ G PGTGKT TI ++ A++
Sbjct: 1148 ESLNVDQKKAVEKVMSAKDYALVLGMPGTGKTTTIAHIIRALI 1190
Score = 49 (22.3 bits), Expect = 7.8e-18, Sum P(4) = 7.8e-18
Identities = 13/49 (26%), Positives = 27/49 (55%)
Query: 29 LVKESQERNDKNSKKVDRGKLG-LRE-VKDTYKDVDDYLATFEPLLFEE 75
+++E DKNS K++R + L++ V + ++ LA EP++ +
Sbjct: 971 VLEEGSAVEDKNSPKINRFQYTFLKDDVTSNFSFMESQLAVGEPIVVSD 1019
Score = 48 (22.0 bits), Expect = 9.8e-11, Sum P(4) = 9.8e-11
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 537 SLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHE 591
++ +L+ PV L ++HPEV+ EF A + + E+ T WH+
Sbjct: 1208 NILLKLKGDSIPVLRLGAPAKVHPEVQ-----EFATLAAQPMNSFEEIRTA-WHD 1256
Score = 47 (21.6 bits), Expect = 1.2e-17, Sum P(4) = 1.2e-17
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 45 DRGKLGLREVKDTYKDVDDYL 65
++GK L EV D + D+DD L
Sbjct: 421 EKGKQTLIEVDDEFDDMDDDL 441
Score = 41 (19.5 bits), Expect = 4.5e-06, Sum P(3) = 4.5e-06
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 550 KMLKTQYRMHPEVRSFPSREFYDEALEDGSDVED 583
K+ + + M R R F + LE+GS VED
Sbjct: 947 KLRRELWTMLSTEREKVGRCFSNVVLEEGSAVED 980
>ASPGD|ASPL0000069352 [details] [associations]
symbol:AN7246 species:162425 "Emericella nidulans"
[GO:0005575 "cellular_component" evidence=ND] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0006614 "SRP-dependent cotranslational protein targeting to
membrane" evidence=IEA] InterPro:IPR000641 InterPro:IPR003593
InterPro:IPR003959 Pfam:PF00004 PRINTS:PR00819 SMART:SM00382
GO:GO:0005524 EMBL:BN001304 eggNOG:COG0464 GO:GO:0017111
EMBL:AACD01000123 RefSeq:XP_680515.1 ProteinModelPortal:Q5AWT4
EnsemblFungi:CADANIAT00000198 GeneID:2870136 KEGG:ani:AN7246.2
HOGENOM:HOG000168598 OMA:LDNQFRL OrthoDB:EOG4CJZR5 Uniprot:Q5AWT4
Length = 2310
Score = 171 (65.3 bits), Expect = 1.6e-17, Sum P(3) = 1.6e-17
Identities = 78/297 (26%), Positives = 130/297 (43%)
Query: 381 PSNSALDEIVLRL--LNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQKRDDSA 438
PS S L R+ ++ IR E I + K++ H VN + L+ R D
Sbjct: 652 PSLSHLSAEARRVWEMDKAIRQEKIAYWKEKLLE-----EHVVN---VQGLIA--RLDRC 701
Query: 439 ADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFS-GSALLSKLNHGFDVVIIDEAAQAVE 497
K + RD +L++ +I C+T + + +++L+ + G VV+++EA + +E
Sbjct: 702 QKKLDEMWNERTRD----VLLSKRIIGCTTTAAAINASVLNTTSPG--VVLLEEAGEILE 755
Query: 498 PATLVPLATGCKQVFLVGDPVQLPATVIS---PVAEHLGY--GTSLFKRLQRAGYPVKML 552
L L + KQ+ ++GD QL + + V + GY SLF+RL +GYP L
Sbjct: 756 SHVLTALGSHTKQLIMIGDHQQLRPKINNYALSVEKGSGYDLNRSLFERLVESGYPHSTL 815
Query: 553 KTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCF----GPFSFFDIHEGKE 608
Q+RM PE+ + R Y + L+ R F P F ++
Sbjct: 816 AKQHRMAPEISALVRRLTYPDLLDGDKTKTRLAPRGLQNRVVFIDHSQPEGFLHGVSDRD 875
Query: 609 SQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKE 665
G GS N EV VL + K + Q + +L I++PY Q+ +E ++
Sbjct: 876 GD-GGKGSKQNTFEVKLVLKIV-KYLGQ--QGYGTDKLVILTPYLGQLHLLREELRK 928
Score = 107 (42.7 bits), Expect = 1.6e-17, Sum P(3) = 1.6e-17
Identities = 18/66 (27%), Positives = 42/66 (63%)
Query: 672 QKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCAS 731
++ + ++T+D QG E D+ I + R++ IGF++ +R+NV ++RA+ ++++G ++
Sbjct: 957 KRPIKLSTIDNYQGEESDIVIATLTRSNKDGDIGFMSAPQRLNVLLSRARDVLIMIGNSN 1016
Query: 732 TLREDK 737
T +
Sbjct: 1017 TFTNSR 1022
Score = 86 (35.3 bits), Expect = 1.6e-17, Sum P(3) = 1.6e-17
Identities = 34/110 (30%), Positives = 55/110 (50%)
Query: 186 LITSSVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKI 245
L+ + V A E L L+ +A E L + V + I S +S G Q+++ +
Sbjct: 393 LVDAPVFAYEPILRQLQEKIELPLAEELLGFQPVDVVAPSGTIPSTVIESLGDQERT--L 450
Query: 246 PGLLHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSA 295
+L + + SQ+E++ GL ++ LIQGPPGTGK+ +G L A
Sbjct: 451 QDILGTEKPLSLDPSQMESLLSGLTQRVS-LIQGPPGTGKS--FVGALIA 497
Score = 42 (19.8 bits), Expect = 0.00028, Sum P(3) = 0.00028
Identities = 14/36 (38%), Positives = 22/36 (61%)
Query: 382 SNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKA 417
+N ALD+ + L++ GI DE+ IVR+G K+
Sbjct: 514 TNHALDQFLEDLMDIGI-DESA------IVRLGSKS 542
Score = 37 (18.1 bits), Expect = 2.1e-10, Sum P(3) = 2.1e-10
Identities = 7/25 (28%), Positives = 14/25 (56%)
Query: 726 VVGCASTLREDKHWNNLVKSAEKQD 750
+VGC S + + + + VK+ + D
Sbjct: 1845 IVGCESIISKLEEYRQSVKNMRELD 1869
>FB|FBgn0030170 [details] [associations]
symbol:CG2990 species:7227 "Drosophila melanogaster"
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
[GO:0000014 "single-stranded DNA specific endodeoxyribonuclease
activity" evidence=ISS] [GO:0033567 "DNA replication, Okazaki
fragment processing" evidence=IEA] [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA] [GO:0043142 "single-stranded
DNA-dependent ATPase activity" evidence=IEA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 EMBL:AE014298 GO:GO:0006200
GO:GO:0017108 GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14
KO:K10742 GeneTree:ENSGT00550000074852 OMA:EHESLCH
FlyBase:FBgn0030170 EMBL:BT088860 RefSeq:NP_727386.1
UniGene:Dm.17561 SMR:Q8IRL9 STRING:Q8IRL9
EnsemblMetazoa:FBtr0071415 GeneID:31934 KEGG:dme:Dmel_CG2990
UCSC:CG2990-RB InParanoid:Q8IRL9 GenomeRNAi:31934 NextBio:776017
Uniprot:Q8IRL9
Length = 1100
Score = 143 (55.4 bits), Expect = 2.3e-17, Sum P(4) = 2.3e-17
Identities = 43/122 (35%), Positives = 57/122 (46%)
Query: 459 LNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPV 518
L + IV T G L + FD I+DEA Q ++P L PL C + LVGDP
Sbjct: 742 LGQPSIVGVTCLGCGHPLFQRRQ--FDYCIVDEATQVLQPTVLRPLIH-CSKFVLVGDPE 798
Query: 519 QLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDG 578
QLP V S A G +LF+RL + +L QYRM+ + + Y L+
Sbjct: 799 QLPPIVRSKEARQRGADETLFQRLD-SEKATAVLSLQYRMNKTITRLANELTYGGDLKCA 857
Query: 579 SD 580
SD
Sbjct: 858 SD 859
Score = 130 (50.8 bits), Expect = 2.3e-17, Sum P(4) = 2.3e-17
Identities = 42/136 (30%), Positives = 73/136 (53%)
Query: 617 WINIDEVDFVL-LLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVV 675
+ N E V+ LL + L S Y +S++ +I+PYR QV+ F++ + +++ +
Sbjct: 942 YTNYCEAGIVMHLLRYLLKSGY----EASRIGVIAPYRAQVELFKKLASK---LDTD--L 992
Query: 676 DITTVDGCQGREKDVAIFSCVRA----SD---KKSIGFLADYRRMNVGITRAKSSILVVG 728
+ TVD QGR+K++ I+SC + SD + L D RR+ V ITRAK+ ++++G
Sbjct: 993 ECNTVDQFQGRDKNLIIYSCSKTGGDFSDMERSREAEILEDQRRLTVAITRAKNKLILLG 1052
Query: 729 CASTLREDKHWNNLVK 744
L + + L K
Sbjct: 1053 DIKCLEQYGPFRQLFK 1068
Score = 80 (33.2 bits), Expect = 2.3e-17, Sum P(4) = 2.3e-17
Identities = 19/43 (44%), Positives = 26/43 (60%)
Query: 256 NHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILH 298
N N Q A L + +LI+G PGTGKTQT++ L+ +LH
Sbjct: 636 NLNKVQQNAALRALTTSSHLLIKGLPGTGKTQTLVALVR-LLH 677
Score = 44 (20.5 bits), Expect = 2.3e-17, Sum P(4) = 2.3e-17
Identities = 8/19 (42%), Positives = 15/19 (78%)
Query: 380 APSNSALDEIVLRLLNTGI 398
A ++SA+D +++RLL G+
Sbjct: 687 AQTHSAVDNLIMRLLPFGL 705
>DICTYBASE|DDB_G0274797 [details] [associations]
symbol:aqr "intron-binding protein aquarius homolog"
species:44689 "Dictyostelium discoideum" [GO:0097157 "pre-mRNA
intronic binding" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR024860 dictyBase:DDB_G0274797
GenomeReviews:CM000151_GR GO:GO:0005681 EMBL:AAFI02000012
GO:GO:0000398 eggNOG:COG1112 KO:K12874 OMA:RTKAVGH GO:GO:0097157
PANTHER:PTHR10887:SF5 RefSeq:XP_643918.1 ProteinModelPortal:Q555Z2
PRIDE:Q555Z2 EnsemblProtists:DDB0233439 GeneID:8619345
KEGG:ddi:DDB_G0274797 InParanoid:Q555Z2 ProtClustDB:CLSZ2431000
Uniprot:Q555Z2
Length = 1487
Score = 171 (65.3 bits), Expect = 1.6e-16, Sum P(4) = 1.6e-16
Identities = 68/272 (25%), Positives = 126/272 (46%)
Query: 504 LATGCKQVFLVGDPVQLPATVISP-VAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEV 562
++ G K+V L+GD QLP V + +A++ + SLF RL R P L Q R P +
Sbjct: 1191 ISRGLKRVILIGDHNQLPPIVQNQSLAKYSHFDQSLFTRLIRLEIPHITLDRQGRSRPSI 1250
Query: 563 RSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGK-----ESQPAGSGSW 617
S ++ + L+D V++ + ++ E ES+P +
Sbjct: 1251 SELFSWKY--KGLQDLPLVKEQLQFKLANPGLAYDYQLINVDESDGYGVGESEPTPY-FY 1307
Query: 618 INIDEVDFVLLLFHKLISM-YPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVD 676
N+ E ++++ +F LI++ YP S ++ +++ Y Q ++ FK + K
Sbjct: 1308 QNLGEAEYIVAMFQYLIAIGYP----SEKITVLTTYNGQKNLLRDVFKAKCTPQDPKKTQ 1363
Query: 677 ------ITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCA 730
ITT+D QG++ D+ + S VR K G + D RR+ V ++RA+ + + C
Sbjct: 1364 YGLPLKITTIDKYQGQQNDIILLSLVRT---KQYGHIRDVRRLIVAMSRARLGLYIF-CK 1419
Query: 731 STLREDKHWNNLV--KSAEKQDCLFRV-SKPY 759
++ + ++V K ++ D L + S+ Y
Sbjct: 1420 KQFFQNCYETSMVFSKLLKRPDKLIIIKSEQY 1451
Score = 113 (44.8 bits), Expect = 1.6e-16, Sum P(4) = 1.6e-16
Identities = 30/84 (35%), Positives = 45/84 (53%)
Query: 251 EYIKENH---NASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPAR---- 303
E IK N + Q+EAI G+ R LI GPPGTGKT + ++S I H++P
Sbjct: 855 EEIKRNKIEFTSKQIEAISSGMKRDNLTLIVGPPGTGKTDIAVQIISNIYHSSPNERTLI 914
Query: 304 -VHSKGGLREI-KRGPELPMHEKY 325
HS L ++ ++ L ++E+Y
Sbjct: 915 ITHSNQALNQLFEKIYRLDINERY 938
Score = 57 (25.1 bits), Expect = 1.6e-16, Sum P(4) = 1.6e-16
Identities = 30/116 (25%), Positives = 55/116 (47%)
Query: 25 DYFRLVKESQER----NDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKAQI 80
D+ ++K SQ ND SK V G LG+ +V + D+D++ T E L ++
Sbjct: 317 DFHFILKTSQSEFLKSNDDKSKSVLEGLLGILKVYYNF-DIDNF--TGEELTKDQATG-- 371
Query: 81 IQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADEVESISPNDLLLLSKEEFKE 136
I ++ +E+Q+ + E E L +V++ + + + N + LS+E E
Sbjct: 372 IHYQNIQELQKIVFKNFPEIKE---IALRNVSFVESKSDLL--NIISTLSQERLNE 422
Score = 52 (23.4 bits), Expect = 1.6e-16, Sum P(4) = 1.6e-16
Identities = 15/60 (25%), Positives = 31/60 (51%)
Query: 448 RKDRDSIRSAILNEAVIV---CSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPL 504
+ D +L ++ IV C+ + + LL +L FD ++++E+AQ + + +PL
Sbjct: 1104 KSPNDRYNYLLLKQSKIVAMTCTHAALKRNELL-RLGFKFDNLLMEESAQISDIESFIPL 1162
Score = 40 (19.1 bits), Expect = 7.9e-15, Sum P(4) = 7.9e-15
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 30 VKESQERNDKNSK--KVDRGKLGLREVKDTYKDVDD 63
+KE QE N+ N+ K+ + DTY + +D
Sbjct: 804 LKEEQENNNNNNNNFKIKFNNENNSILVDTYNNNND 839
>ZFIN|ZDB-GENE-030131-9089 [details] [associations]
symbol:mov10b.1 "Moloney leukemia virus 10,
homolog, b.1" species:7955 "Danio rerio" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing
body" evidence=ISS] [GO:0035279 "mRNA cleavage involved in gene
silencing by miRNA" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR003593
SMART:SM00382 ZFIN:ZDB-GENE-030131-9089 GO:GO:0005524 GO:GO:0003723
GO:GO:0004386 GO:GO:0000932 GO:GO:0035279 eggNOG:COG1112
InterPro:IPR026122 PANTHER:PTHR10887:SF17
GeneTree:ENSGT00550000074391 EMBL:BX323059 EMBL:BC171375
IPI:IPI00801311 RefSeq:NP_001037807.2 UniGene:Dr.74181
ProteinModelPortal:Q1LXK4 STRING:Q1LXK4 Ensembl:ENSDART00000086946
GeneID:556024 KEGG:dre:556024 CTD:556024 HOGENOM:HOG000239755
InParanoid:Q1LXK4 OMA:NLVGECY OrthoDB:EOG4SXNC4 NextBio:20881283
Bgee:Q1LXK4 Uniprot:Q1LXK4
Length = 1013
Score = 229 (85.7 bits), Expect = 2.3e-16, Sum P(2) = 2.3e-16
Identities = 68/214 (31%), Positives = 110/214 (51%)
Query: 547 YPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDV---EDYTTRDWHEYRCFGPFSFFDI 603
Y K+L+ YR HP + P+ FYD L+ +D Y T + R F P F +
Sbjct: 746 YVTKLLQN-YRSHPSILKVPNELFYDNELKACADEISSRQYCTWEHLPKRGF-PVIFHGV 803
Query: 604 HEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQ---LK-SSSQLAIISPYRHQVKQF 659
GK+ + + S S+ N E+D ++ KL+ + K S + II+PYR QV++
Sbjct: 804 -VGKDERESTSPSFFNTSEIDKIMDYLKKLLLTQAKKGIAKISPKDIGIIAPYRKQVEKI 862
Query: 660 QERFK---ETFGVESQKVVDITTVDGCQGREKDVAIFSCVRAS-------DKKSIGFLAD 709
++ K E + + + + +V+ QG+E+ V I S VR+S DK +IGFL +
Sbjct: 863 RQAIKIHRELKSLSGIEELKVGSVEEFQGQERKVIIVSTVRSSKEHIILDDKFNIGFLKN 922
Query: 710 YRRMNVGITRAKSSILVVGCASTLREDKHWNNLV 743
+R NV +TRAK+ +++VG LR D+ W +
Sbjct: 923 EKRFNVAVTRAKALLIMVGNPIILRTDEIWGRFM 956
Score = 171 (65.3 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
Identities = 85/296 (28%), Positives = 130/296 (43%)
Query: 379 CAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQKRDDSA 438
CAPSNSA D++ +L+ + D I RI + N I ++E + +
Sbjct: 579 CAPSNSAADQLGEKLITSQHVDAR------NIYRIYASSR---NPKEIPKVLEN--NSNV 627
Query: 439 ADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHG-FDVVIIDEAAQAVE 497
+ ++D ++ ++VC TL +G + G F + +DEA AVE
Sbjct: 628 EGENIIFPCKED-------LMPYKIVVC-TLVTAGRLVSGGFPVGHFSHIFVDEAGHAVE 679
Query: 498 PATLVPLA------TGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQ------RA 545
P ++ +A TG Q+ L GDP QL + SP A G G SL +RL +
Sbjct: 680 PEIVISVAGLLNAETG--QLVLAGDPKQLGPILRSPFAIKYGLGLSLLERLMTQNELYQK 737
Query: 546 G-------YPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDV---EDYTTRDWHEYRCF 595
G Y K+L+ YR HP + P+ FYD L+ +D Y T + R F
Sbjct: 738 GDTGFDNRYVTKLLQN-YRSHPSILKVPNELFYDNELKACADEISSRQYCTWEHLPKRGF 796
Query: 596 GPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISP 651
P F + GK+ + + S S+ N E+D ++ KL+ Q K +A ISP
Sbjct: 797 -PVIFHGV-VGKDERESTSPSFFNTSEIDKIMDYLKKLL--LTQAKKG--IAKISP 846
Score = 63 (27.2 bits), Expect = 2.3e-16, Sum P(2) = 2.3e-16
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 268 GLLRKAFVLIQGPPGTGKTQTILGLLSAI 296
G + A L+ GPPGTGKT TI+ + +
Sbjct: 539 GTSKPAPYLVFGPPGTGKTVTIVEAIKQV 567
>UNIPROTKB|I3LBB7 [details] [associations]
symbol:I3LBB7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043142 "single-stranded DNA-dependent ATPase activity"
evidence=IEA] [GO:0033567 "DNA replication, Okazaki fragment
processing" evidence=IEA] [GO:0017108 "5'-flap endonuclease
activity" evidence=IEA] InterPro:IPR026851 GO:GO:0017108
GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14
GeneTree:ENSGT00550000074852 EMBL:CU468421
Ensembl:ENSSSCT00000030264 OMA:STCHITH Uniprot:I3LBB7
Length = 249
Score = 213 (80.0 bits), Expect = 3.0e-16, P = 3.0e-16
Identities = 73/240 (30%), Positives = 112/240 (46%)
Query: 484 FDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQ 543
FD I+DEA+Q +P L PL ++ LVGD QLP V++ A LG SLFKRL+
Sbjct: 13 FDFCIVDEASQISQPICLGPLFFS-RRFVLVGDHQQLPPLVLNREARALGMSESLFKRLE 71
Query: 544 RAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSD------------------VE--- 582
+ V L QYRM+ ++ S ++ Y+ LE GSD +E
Sbjct: 72 QNKNAVVQLTVQYRMNSKIMSLSNKLTYEGKLECGSDKVASAVVNLPKLKDVKLELEFYA 131
Query: 583 DYTTRDWH--EYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQL 640
DY+ W + P F + + + G NI E V+ L S++ +
Sbjct: 132 DYSENPWMVGAFEPNNPVCFLNTDKVPAPEQVEKGGVSNITEAKLVVYL----TSIFVKA 187
Query: 641 KSSS-QLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRAS 699
+ + II+PYR Q+K + + S +V++ TVD QGR+K + + S VR++
Sbjct: 188 GCNPCNIGIIAPYRQQLKVINDLLSHS----SVGMVEVNTVDKYQGRDKSIILVSFVRSN 243
>ZFIN|ZDB-GENE-060526-371 [details] [associations]
symbol:mov10b.2 "Moloney leukemia virus 10,
homolog, b.2" species:7955 "Danio rerio" [GO:0000932 "cytoplasmic
mRNA processing body" evidence=ISS] [GO:0035279 "mRNA cleavage
involved in gene silencing by miRNA" evidence=ISS] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] ZFIN:ZDB-GENE-060526-371
GO:GO:0005524 GO:GO:0003723 GO:GO:0004386 GO:GO:0000932
GO:GO:0035279 eggNOG:COG1112 InterPro:IPR026122
PANTHER:PTHR10887:SF17 GeneTree:ENSGT00550000074391 EMBL:BX323059
HOGENOM:HOG000239755 OrthoDB:EOG4SXNC4 IPI:IPI00611260
RefSeq:NP_001037805.1 UniGene:Dr.94434 ProteinModelPortal:Q1LXK5
Ensembl:ENSDART00000078491 GeneID:555950 KEGG:dre:555950 CTD:555950
InParanoid:Q1LXK5 NextBio:20881245 Uniprot:Q1LXK5
Length = 1015
Score = 231 (86.4 bits), Expect = 4.0e-16, Sum P(3) = 4.0e-16
Identities = 75/252 (29%), Positives = 120/252 (47%)
Query: 549 VKMLKTQYRMHPEVRSFPSREFYDEALEDGSD-VEDYTTRDWHEYRCFG-PFSFFDIHEG 606
V L YR HP + P+R FYD L+ +D + W G P F + G
Sbjct: 752 VSKLIMNYRSHPYILEVPNRLFYDGELKACADEISSNQYCMWEHLPSKGFPVIFHGV-PG 810
Query: 607 KESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSS----SQLAIISPYRHQVKQFQER 662
K+ + + S S+ NI E++ ++ KL+ P+ S + II+PYR QV++ +
Sbjct: 811 KDERESNSPSFFNIYEINILVDYLKKLLLTQPKKGISRIFPKDIGIIAPYRKQVEKIKRA 870
Query: 663 ------FKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKK-------SIGFLAD 709
F++ G+++ KV +V+ QG+E+ V + S VR+S K +IGFL +
Sbjct: 871 IDADKDFQDYMGIDNLKV---GSVEEFQGQERKVIMVSTVRSSVKYISLDETFNIGFLKN 927
Query: 710 YRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRVSKPYASFFSDENLE 769
+R NV +TRAKS +++VG LR D+ W + CL R S S E ++
Sbjct: 928 EKRFNVAVTRAKSLLIMVGNPMILRTDESWGRFIDF-----CLERGGYTGISITSVERID 982
Query: 770 SMRKNATTDNVQ 781
+ N+Q
Sbjct: 983 DVESRLLALNIQ 994
Score = 173 (66.0 bits), Expect = 6.6e-10, Sum P(3) = 6.6e-10
Identities = 80/286 (27%), Positives = 129/286 (45%)
Query: 379 CAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQKRDDSA 438
CAPSNSA D++ +L+ + E++ ++ KI R+ + N I ++ +D+
Sbjct: 584 CAPSNSAADQLCEKLITS----EHVDAH--KIYRLYASSR---NQKDIPKIL---KDNCN 631
Query: 439 ADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEP 498
D++ K+ D + IL ++ L +G H F +DEA AVE
Sbjct: 632 VDEEMIDFPCKE-DLMSYKILICTLVTAGRL-VTGGFSEDHFTHNF----VDEAGHAVES 685
Query: 499 ATLVPLA---TGCK-QVFLVGDPVQLPATVISPVAEHLGYGTSLFKRL--QRAGYP---- 548
T++ +A K Q+ L GDP QL + SP+A + G SL +RL Q Y
Sbjct: 686 ETIISVAGLLNAEKGQLVLAGDPKQLGPILRSPLAINHGLDVSLLERLMTQNDLYKRGDV 745
Query: 549 ------VKMLKTQYRMHPEVRSFPSREFYDEALEDGSD-VEDYTTRDWHEYRCFG-PFSF 600
V L YR HP + P+R FYD L+ +D + W G P F
Sbjct: 746 EFDNRYVSKLIMNYRSHPYILEVPNRLFYDGELKACADEISSNQYCMWEHLPSKGFPVIF 805
Query: 601 FDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQL 646
+ GK+ + + S S+ NI E++ ++ KL+ P+ K S++
Sbjct: 806 HGV-PGKDERESNSPSFFNIYEINILVDYLKKLLLTQPK-KGISRI 849
Score = 66 (28.3 bits), Expect = 4.0e-16, Sum P(3) = 4.0e-16
Identities = 17/46 (36%), Positives = 24/46 (52%)
Query: 254 KENHNASQLEAIHE---GLLRKAFVLIQGPPGTGKTQTILGLLSAI 296
K +N Q A+ G + A L+ GPPGTGKT TI+ + +
Sbjct: 527 KLEYNFQQYSAVCNIVAGTSKPAPYLVFGPPGTGKTVTIVEAIKQV 572
Score = 38 (18.4 bits), Expect = 4.0e-16, Sum P(3) = 4.0e-16
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 223 PFKDLILSASEKSSGSQDQSWKIPGLLHEYI 253
P+K L L+ SE + D+ + G L ++
Sbjct: 289 PYKPLRLNISEPENCIIDEGFPPDGYLQNFL 319
>SGD|S000001207 [details] [associations]
symbol:DNA2 "Tripartite DNA replication factor" species:4932
"Saccharomyces cerevisiae" [GO:0001302 "replicative cell aging"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0000784
"nuclear chromosome, telomeric region" evidence=IDA] [GO:0000723
"telomere maintenance" evidence=IMP] [GO:0006261 "DNA-dependent DNA
replication" evidence=IMP;IDA] [GO:0006273 "lagging strand
elongation" evidence=IGI;IMP] [GO:0006281 "DNA repair"
evidence=IEA;IGI;IMP] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IDA] [GO:0000014 "single-stranded DNA specific
endodeoxyribonuclease activity" evidence=IDA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0004518 "nuclease activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005694
"chromosome" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0017108 "5'-flap endonuclease activity"
evidence=IEA;IDA] [GO:0033567 "DNA replication, Okazaki fragment
processing" evidence=IEA] [GO:0043142 "single-stranded
DNA-dependent ATPase activity" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] [GO:0000733 "DNA strand renaturation" evidence=IDA]
[GO:0000706 "meiotic DNA double-strand break processing"
evidence=IGI] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR026851
SGD:S000001207 InterPro:IPR014808 Pfam:PF08696 GO:GO:0005524
GO:GO:0005737 GO:GO:0046872 GO:GO:0003677 EMBL:BK006934
GO:GO:0001302 GO:GO:0051539 GO:GO:0004003 eggNOG:COG1112
GO:GO:0000784 EMBL:U00027 GO:GO:0000723 GO:GO:0000706 GO:GO:0000733
GO:GO:0017108 GO:GO:0000014 GO:GO:0043139 GO:GO:0043142
GO:GO:0033567 PANTHER:PTHR10887:SF14 KO:K10742
GeneTree:ENSGT00550000074852 OrthoDB:EOG47H8Z4 PIR:S48904
RefSeq:NP_012034.1 ProteinModelPortal:P38859 SMR:P38859
DIP:DIP-2324N IntAct:P38859 MINT:MINT-620090 STRING:P38859
EnsemblFungi:YHR164C GeneID:856569 KEGG:sce:YHR164C CYGD:YHR164c
HOGENOM:HOG000112234 OMA:GLARYNI NextBio:982411
Genevestigator:P38859 GermOnline:YHR164C GO:GO:0035861
GO:GO:0006273 Uniprot:P38859
Length = 1522
Score = 142 (55.0 bits), Expect = 5.0e-16, Sum P(4) = 5.0e-16
Identities = 57/200 (28%), Positives = 94/200 (47%)
Query: 384 SALDEIVLRLLNTGIRDENIRSYTPKIV-RIGLKAHHSVNSVAIDHLVEQKRDDSAADKQ 442
+ + EI+ L++ G R + SYT V I +K ++ S+ + + D+
Sbjct: 1082 TVIAEIIKILVSEGKR-VLLTSYTHSAVDNILIKLRNTNISIMRLGMKHKVHPDTQKYVP 1140
Query: 443 KHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNH-GFDVVIIDEAAQAVEPATL 501
+ + + D + S I + +V+ + L + +L LN FD VI+DEA+Q P L
Sbjct: 1141 NYASVKSYNDYL-SKINSTSVVATTCLGIND--ILFTLNEKDFDYVILDEASQISMPVAL 1197
Query: 502 VPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRL-QRAGYPVKMLKTQYRMHP 560
PL G + +VGD QLP V + A G SLFK ++ V L QYRM
Sbjct: 1198 GPLRYG-NRFIMVGDHYQLPPLVKNDAARLGGLEESLFKTFCEKHPESVAELTLQYRMCG 1256
Query: 561 EVRSFPSREFYDEALEDGSD 580
++ + + YD L+ G++
Sbjct: 1257 DIVTLSNFLIYDNKLKCGNN 1276
Score = 133 (51.9 bits), Expect = 5.0e-16, Sum P(4) = 5.0e-16
Identities = 38/133 (28%), Positives = 69/133 (51%)
Query: 646 LAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIG 705
+ +++ YR Q++ K+ F ++I T D QGR+K I S VR + + + G
Sbjct: 1361 IGVMTLYRAQLRLL----KKIFNKNVYDGLEILTADQFQGRDKKCIIISMVRRNSQLNGG 1416
Query: 706 -FLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRVSKP--YASF 762
L + RR+NV +TRAKS ++++G ST+ + V E+++ ++ + K Y
Sbjct: 1417 ALLKELRRVNVAMTRAKSKLIIIGSKSTIGSVPEIKSFVNLLEERNWVYTMCKDALYKYK 1476
Query: 763 FSDEN--LESMRK 773
F D + ++ RK
Sbjct: 1477 FPDRSNAIDEARK 1489
Score = 72 (30.4 bits), Expect = 5.0e-16, Sum P(4) = 5.0e-16
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 258 NASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARV 304
N +Q EAI + + + + LI G PGTGKT T++ + IL + RV
Sbjct: 1053 NLNQKEAIDKVMRAEDYALILGMPGTGKT-TVIAEIIKILVSEGKRV 1098
Score = 43 (20.2 bits), Expect = 5.0e-16, Sum P(4) = 5.0e-16
Identities = 20/92 (21%), Positives = 39/92 (42%)
Query: 8 PQDEASIFRFCKI-ILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLA 66
P ++ F I + D +L++E+ + + LR + D D++ L
Sbjct: 164 PNRLKTVLSFTNIQVPNADVNQLIQENGNEQVRPKPAEISTRESLRNIDDILDDIEGDL- 222
Query: 67 TFEPLL--FEE-----VKAQIIQKKDEEEVQE 91
T +P + F + +KA ++KK E +E
Sbjct: 223 TIKPTITKFSDLPSSPIKAPNVEKKAEVNAEE 254
Score = 43 (20.2 bits), Expect = 3.4e-06, Sum P(4) = 3.4e-06
Identities = 8/17 (47%), Positives = 14/17 (82%)
Query: 382 SNSALDEIVLRLLNTGI 398
++SA+D I+++L NT I
Sbjct: 1104 THSAVDNILIKLRNTNI 1120
>RGD|1589127 [details] [associations]
symbol:LOC684558 "similar to regulator of nonsense transcripts
1" species:10116 "Rattus norvegicus" [GO:0000785 "chromatin"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0009048 "dosage compensation by inactivation of X chromosome"
evidence=IEA] [GO:0035145 "exon-exon junction complex"
evidence=IEA] [GO:0044530 "supraspliceosomal complex" evidence=IEA]
[GO:0071044 "histone mRNA catabolic process" evidence=IEA]
GO:GO:0006260 GO:GO:0006281 GO:GO:0000785 GO:GO:0003682
GO:GO:0007049 GO:GO:0071044 GO:GO:0009048 GO:GO:0004004
GO:GO:0035145 GeneTree:ENSGT00550000074391 IPI:IPI00767398
PRIDE:F1LY19 Ensembl:ENSRNOT00000027268 Uniprot:F1LY19
Length = 391
Score = 223 (83.6 bits), Expect = 2.2e-15, P = 2.2e-15
Identities = 54/156 (34%), Positives = 87/156 (55%)
Query: 600 FFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQ---V 656
FF + +G+E + S++N E V + KL+ + Q+ II+PY Q +
Sbjct: 20 FFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAK---PDQIGIITPYEGQRSYL 76
Query: 657 KQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVG 716
Q+ + F + + + V+I +VD QGREKD I SCVRA++ + IGFL D RR+NV
Sbjct: 77 VQYMQ-FSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVA 135
Query: 717 ITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
+TRA+ +++VG L + WN+L+ ++Q L
Sbjct: 136 LTRARYGVIIVGNPKALSKQPLWNHLLSYYKEQKAL 171
>ZFIN|ZDB-GENE-061013-333 [details] [associations]
symbol:zgc:154086 "zgc:154086" species:7955 "Danio
rerio" [GO:0005575 "cellular_component" evidence=ND]
ZFIN:ZDB-GENE-061013-333 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 PROSITE:PS51192 InterPro:IPR025223 Pfam:PF14444
HOVERGEN:HBG052382 KO:K13983 InterPro:IPR026125
PANTHER:PTHR10887:SF6 HOGENOM:HOG000015363 EMBL:BC124807
IPI:IPI00611882 RefSeq:NP_001070795.1 UniGene:Dr.40096
ProteinModelPortal:Q08BA5 GeneID:768184 KEGG:dre:768184
NextBio:20918499 Uniprot:Q08BA5
Length = 1106
Score = 213 (80.0 bits), Expect = 2.3e-15, Sum P(2) = 2.3e-15
Identities = 103/390 (26%), Positives = 175/390 (44%)
Query: 379 CAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQKRDDSA 438
C PSNSA D I +RL ++G ++ + R VN+ + ++S
Sbjct: 727 CTPSNSAADLICMRLHHSGFL------HSASLAR--------VNATC-------RPEESM 765
Query: 439 ADKQKHGATRKDRDSIRSAILNEAVIVCSTLS-FSGSAL-LSKLNHGF-DVVIIDEAAQA 495
+++ + A R D ++ V CS+ F L + H F D +
Sbjct: 766 SEELRQYA-RAGEDIRHASFHRIVVSTCSSAGMFYQIGLRVGHFTHVFVDEAGQATEPET 824
Query: 496 VEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRL---------QRAG 546
+ P +L+ +G Q+ L GDP QL V S +A G G SL +RL +R
Sbjct: 825 LIPLSLLSETSG--QIVLAGDPKQLGPVVKSRLASVFGLGVSLLERLMGNSLYACGERGF 882
Query: 547 YPVKMLKT--QYRMHPEVRSFPSREFY-DEALEDGSDVEDYTTRDWHEYRCFG-PFSFFD 602
P+ + K YR H + PSR FY E + W++ G P F
Sbjct: 883 NPLLVTKLLYNYRSHEALLDLPSRLFYAGELCVRAQRAAVDSLCHWNKLPTRGFPLIFHG 942
Query: 603 IHEGKESQPAGSGSWINIDEVDFVLLLFHKLIS-MYPQLKSSSQLAIISPYRHQVKQFQE 661
+ G E + + SW N E V++ +L +Y + S++ + +I+PYR QV++ +
Sbjct: 943 VR-GSEMREGCNPSWFNPAEAVQVMMYCCQLAKRLYNPI-SAADIGVIAPYRKQVEKIRV 1000
Query: 662 RFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKK-------SIGFLADYRRMN 714
+ G+ KV +V+ QG+E + I S VR+++ +GFL++ +R N
Sbjct: 1001 LLQRV-GLGEVKV---GSVEEFQGQEFLIMILSTVRSNESLLNEELQCMLGFLSNPKRFN 1056
Query: 715 VGITRAKSSILVVGCASTLREDKHWNNLVK 744
V ITRAK+ ++V+G L ++ ++ L++
Sbjct: 1057 VAITRAKALLIVIGNPHVLIKEPCFSALLQ 1086
Score = 71 (30.1 bits), Expect = 2.3e-15, Sum P(2) = 2.3e-15
Identities = 21/82 (25%), Positives = 40/82 (48%)
Query: 220 GSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIKENHNASQLEAIHE---GLLRKAFVL 276
GS +++ A++ + +IP ++ + NA+Q +A+ G R +
Sbjct: 637 GSALTAEMVSVATQTKTDLSVTEKRIPNP-GQFFNPDLNAAQKQAVRRILSGESRPTPYV 695
Query: 277 IQGPPGTGKTQTILGLLSAILH 298
+ GPPGTGKT T++ + + H
Sbjct: 696 LFGPPGTGKTITLIEAILQVHH 717
>FB|FBgn0034187 [details] [associations]
symbol:CG6967 species:7227 "Drosophila melanogaster"
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=ISS] UCSC:CG6967-RC
FlyBase:FBgn0034187 NextBio:801049 EMBL:AY119610
ProteinModelPortal:Q8MRI1 PRIDE:Q8MRI1 InParanoid:Q8MRI1
PhylomeDB:Q8MRI1 ArrayExpress:Q8MRI1 Bgee:Q8MRI1 Uniprot:Q8MRI1
Length = 825
Score = 202 (76.2 bits), Expect = 7.6e-15, Sum P(2) = 7.6e-15
Identities = 114/448 (25%), Positives = 192/448 (42%)
Query: 380 APSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQKRDDSAA 439
A SNSA D I L+L + NIR + + H + V + E+ +
Sbjct: 366 AGSNSACDTIALKLCE--YIESNIRLQEHFAQQKLPEPDHQLIRVYSRSIYEKGFASVPS 423
Query: 440 DKQKHGATRKD-RDSIR-SAILNEAVIVCS--TLSFSGSALLSKLNHGFDVVIIDEAAQA 495
K+ K D I+ S I+ +IV + T++ + L + N F + IDEA +
Sbjct: 424 LLLKNSNCSKSIYDHIKASRIVKYGIIVATLCTVARLVTDTLGRYNF-FTHIFIDEAGAS 482
Query: 496 VEPATLVPLATGCKQ-----VFLVGDPVQLPATVISPVAEHLGYGTSLFKRL-------- 542
EP L+ + G KQ V L GD QL A + S A LG SL +RL
Sbjct: 483 TEPEALIGIM-GIKQTADCHVILSGDHKQLGAVIKSNRAASLGLSRSLMERLLQSDCYKS 541
Query: 543 -QRAGYPVKM---LKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYT-TRDWHEYRC--F 595
+ Y L YR HP++ + +Y+ L+ + D +W F
Sbjct: 542 DENGNYDRNRQMRLCRNYRSHPQIVRLFNELYYNGELKAQAPAMDVNLAANWSVLTNPQF 601
Query: 596 GPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQ 655
P F H + + S+ N+ E + + +LI+ ++ + I++PY Q
Sbjct: 602 -PIIFQATHGVTNREQNSTSSYNNL-EAEVICWYVKRLIN--DRVVGQEDVGIVAPYTAQ 657
Query: 656 VKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNV 715
K + ++ G + V++ +V+ QGREK + I S V++ ++GF+ + RR+NV
Sbjct: 658 GK-LVTKLLQSKGYPN---VEVGSVETYQGREKTIIIASLVKSFT--NMGFMCNPRRVNV 711
Query: 716 GITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLF---RVS--KPYASFFSDE-NLE 769
++RAK+ +++VG TLR + ++ +K R S +P+ +DE N E
Sbjct: 712 LLSRAKALLILVGNPVTLRHHSDFKFVINECKKHGTYLLKKRDSGQRPHILIKADESNEE 771
Query: 770 SMRKNATTDN--VQGADGHVPHDDETMH 795
S + D+ + H D +H
Sbjct: 772 SSSEPEDEDDKLIPSYARMQQHTDAAIH 799
Score = 74 (31.1 bits), Expect = 7.6e-15, Sum P(2) = 7.6e-15
Identities = 20/51 (39%), Positives = 28/51 (54%)
Query: 258 NASQLEAIHE---GLLRKAFVLIQGPPGTGKTQTIL-GLLSAILHATPARV 304
NA QLEA+ G + ++ GPPGTGKT TI+ +L L +R+
Sbjct: 312 NAEQLEAVQRIVAGPSTQGPYILFGPPGTGKTTTIVEAILQLRLQQPQSRI 362
Score = 45 (20.9 bits), Expect = 7.7e-12, Sum P(2) = 7.7e-12
Identities = 34/151 (22%), Positives = 70/151 (46%)
Query: 169 HINKDAVKSQRLL-NIHSLITSSVSAVEKRLFSLKICSLSTIAREYLALRSVG-SLPFKD 226
H ++D +L ++ S+ S + V R FS K ++ + R Y +RS ++ +
Sbjct: 187 HPHEDLEPGDPMLRHVASVDKVSSTTVHVR-FSRKHKAVLSGQRFYAIIRSRRLTIRYMY 245
Query: 227 LILSASEKSSGSQDQSWKIPGLLHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKT 286
L+ ++S + + P L + + +N SQ++ +G L +QG P T
Sbjct: 246 RALNLLQESPLVRRYLFPFPSWLTQLV-DN---SQIKVCCDGHLPN---WMQGRPQEPAT 298
Query: 287 QTILGLLSAILHATPARVHSKGGLREIKRGP 317
T L LL++ +++ ++ + ++ I GP
Sbjct: 299 PTSLSLLNSTIYSNAEQLEA---VQRIVAGP 326
>FB|FBgn0051368 [details] [associations]
symbol:CG31368 species:7227 "Drosophila melanogaster"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA;IC]
[GO:0097157 "pre-mRNA intronic binding" evidence=IEA] [GO:0071011
"precatalytic spliceosome" evidence=IDA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] InterPro:IPR024860
InterPro:IPR026300 PIRSF:PIRSF038901 EMBL:AE014297 GO:GO:0016787
GO:GO:0071011 GO:GO:0000398 eggNOG:COG1112 KO:K12874 OMA:RTKAVGH
GO:GO:0071013 GO:GO:0097157 PANTHER:PTHR10887:SF5
GeneTree:ENSGT00700000104467 RefSeq:NP_996198.2 UniGene:Dm.10009
ProteinModelPortal:Q7KSN8 SMR:Q7KSN8 PaxDb:Q7KSN8
EnsemblMetazoa:FBtr0301042 GeneID:41437 KEGG:dme:Dmel_CG31368
UCSC:CG31368-RB FlyBase:FBgn0051368 InParanoid:Q7KSN8
OrthoDB:EOG43XSJ9 PhylomeDB:Q7KSN8 GenomeRNAi:41437 NextBio:823855
ArrayExpress:Q7KSN8 Bgee:Q7KSN8 Uniprot:Q7KSN8
Length = 1486
Score = 185 (70.2 bits), Expect = 9.6e-15, Sum P(3) = 9.6e-15
Identities = 83/312 (26%), Positives = 144/312 (46%)
Query: 448 RKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGF--DVVIIDEAAQAVEPATLVPLA 505
R D + ++ EA I+ T + + +N GF D ++++E+AQ +E T +PL
Sbjct: 1034 RTGLDRSKYLLVKEAKIIAMTCTHAALKRKELVNLGFRYDNILMEESAQILEIETFIPLL 1093
Query: 506 T-----GC---KQVFLVGDPVQLPATVISPVA--EHLGYGTSLFKRLQRAGYPVKMLKTQ 555
G K+ ++GD QLP VI +A ++ SLF RL R G P L Q
Sbjct: 1094 LQNPLDGLNRLKRWIMIGDHHQLPP-VIKNMAFQKYSNMEQSLFTRLVRLGVPTVDLDGQ 1152
Query: 556 YRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGP-----FSFFDIHEGK--- 607
R + S + + LED ++ RD EY+ P + ++ + K
Sbjct: 1153 GRARASICSLYKWRY--KKLED---LQHIFERD--EYKQANPGFVHDYQLINVEDFKGVG 1205
Query: 608 ESQPAGSGSWINIDEVDFVLLLF-HKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKET 666
ES+P + N+ E ++++ ++ + + YP K ++I++ Y Q ++
Sbjct: 1206 ESEP-NPYFYQNLAEAEYIVAVYMYMRLLGYPAAK----ISILTTYNGQKHLIRDVINAR 1260
Query: 667 FGVESQKVVD----ITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKS 722
G + ++ ITTVD QG++ D + S VR K++G L D RR+ V ++RA+
Sbjct: 1261 CG--NNPLIGWPHKITTVDKYQGQQNDYILISLVRT---KAVGHLRDVRRLVVAMSRARL 1315
Query: 723 SILVVGCASTLR 734
+ V G S +
Sbjct: 1316 GLYVFGRVSLFK 1327
Score = 88 (36.0 bits), Expect = 9.6e-15, Sum P(3) = 9.6e-15
Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 260 SQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATP 301
+Q+EAI G+ + L+ GPPGTGKT + ++S I H P
Sbjct: 818 TQVEAIRAGM-QPGLTLVVGPPGTGKTDVAVQIISNIYHNHP 858
Score = 57 (25.1 bits), Expect = 9.6e-15, Sum P(3) = 9.6e-15
Identities = 32/122 (26%), Positives = 55/122 (45%)
Query: 159 LRMYLAGEVIHINKDAVKSQRLLNIH-SLITSSVSAVEKRLFSLKICSLSTIA----REY 213
L+ Y E+ + ++ + +H ITS AV + SL++ +LS +A RE
Sbjct: 318 LKFYTRFEINDVTGSSLTDHDMTQLHYKKITSLQRAVFAKFPSLRVFALSNVATVDNRES 377
Query: 214 LALRSVGSLPFKDLILSASEKSSGSQDQ----SW-KIPG-LLHEYIKENHN--ASQLEAI 265
L + G L K L+ A+ + ++ W ++ L E + H SQLEA+
Sbjct: 378 LE-QHFGGLDGKGLLQIATFLNLVPEEVVSPLDWHRVDEQFLRELLITRHERRCSQLEAL 436
Query: 266 HE 267
+E
Sbjct: 437 NE 438
Score = 46 (21.3 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 249 LHEYIKENHNASQLEAIHE 267
LH+Y+ N N +LE+ +E
Sbjct: 477 LHDYLLRNFNLFRLESTYE 495
>MGI|MGI:97054 [details] [associations]
symbol:Mov10 "Moloney leukemia virus 10" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000932 "cytoplasmic mRNA processing body" evidence=ISO]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0031047 "gene silencing by RNA"
evidence=IEA] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=ISO] InterPro:IPR003593 SMART:SM00382
MGI:MGI:97054 GO:GO:0005524 GO:GO:0003723 GO:GO:0004386
GO:GO:0000932 GO:GO:0035279 eggNOG:COG1112 InterPro:IPR026122
PANTHER:PTHR10887:SF17 GeneTree:ENSGT00550000074391 CTD:4343
HOVERGEN:HBG052500 EMBL:X52574 EMBL:AK004542 EMBL:BC053743
EMBL:X75819 IPI:IPI00130328 PIR:A39611 RefSeq:NP_001156912.1
RefSeq:NP_001156913.1 RefSeq:NP_032645.2 UniGene:Mm.1597
ProteinModelPortal:P23249 SMR:P23249 DIP:DIP-48575N STRING:P23249
PhosphoSite:P23249 PaxDb:P23249 PRIDE:P23249
Ensembl:ENSMUST00000168015 GeneID:17454 KEGG:mmu:17454
NextBio:292100 Bgee:P23249 Genevestigator:P23249
GermOnline:ENSMUSG00000002227 Uniprot:P23249
Length = 1004
Score = 198 (74.8 bits), Expect = 2.0e-14, Sum P(3) = 2.0e-14
Identities = 62/213 (29%), Positives = 108/213 (50%)
Query: 550 KMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR-DWHEYRCFG-PFSFFDIHEGK 607
K+L+ YR HP + P++ +YD L+ +DV D W G P F + GK
Sbjct: 728 KLLRN-YRSHPTILDIPNQLYYDGELQACADVVDRERFCRWEGLPQQGFPIIFHGVM-GK 785
Query: 608 ESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLA-----IISPYRHQVKQFQ-- 660
+ + S S+ N +E V +L++ + K ++L+ +ISPYR QV++ +
Sbjct: 786 DEREGNSPSFFNPEEAATVTSYLKQLLAPSSK-KGKARLSPRNVGVISPYRKQVEKIRYC 844
Query: 661 --ERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKK-------SIGFLADYR 711
+ +E G++ K + + +V+ QG+E+ V + S VR+S ++GFL + +
Sbjct: 845 ITKLDRELRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQSFVQLDLDFNLGFLKNPK 904
Query: 712 RMNVGITRAKSSILVVGCASTLREDKHWNNLVK 744
R NV +TRAK+ ++VVG L D W ++
Sbjct: 905 RFNVAVTRAKALLIVVGNPLLLGHDPDWKTFLE 937
Score = 145 (56.1 bits), Expect = 9.0e-09, Sum P(3) = 9.0e-09
Identities = 68/220 (30%), Positives = 103/220 (46%)
Query: 459 LNEAVIVCSTLSFSGSALLSK---LNHGFDVVIIDEAAQAVEPATLVPLA-------TGC 508
L + ++ +TL + S L+S ++H F + IDEA +EP +LV +A TG
Sbjct: 614 LQQYRVLITTL-ITASRLVSAQFPIDH-FTHIFIDEAGHCMEPESLVAIAGLMDVKETGN 671
Query: 509 K--QVFLVGDPVQLPATVISPVAEHLGYGTSLFKRL-------QRA--GY-P---VKMLK 553
Q+ L GDP QL + SP+A G G SL +RL ++ GY P K+L+
Sbjct: 672 PGGQLVLAGDPRQLGPVLRSPLALKHGLGYSLLERLLAYNSLYKKGPNGYDPQFITKLLR 731
Query: 554 TQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR-DWHEYRCFG-PFSFFDIHEGKESQP 611
YR HP + P++ +YD L+ +DV D W G P F + GK+ +
Sbjct: 732 N-YRSHPTILDIPNQLYYDGELQACADVVDRERFCRWEGLPQQGFPIIFHGVM-GKDERE 789
Query: 612 AGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISP 651
S S+ N +E V +L++ P K A +SP
Sbjct: 790 GNSPSFFNPEEAATVTSYLKQLLA--PSSKKGK--ARLSP 825
Score = 78 (32.5 bits), Expect = 2.0e-14, Sum P(3) = 2.0e-14
Identities = 20/51 (39%), Positives = 29/51 (56%)
Query: 258 NASQLEAI-H--EGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVH 305
N QL+A+ H G R A +I GPPGTGKT T++ + ++ P + H
Sbjct: 501 NPEQLQAMKHIVRGTTRPAPYIIFGPPGTGKTVTLVEAIKQVVKHLP-KAH 550
Score = 44 (20.5 bits), Expect = 2.0e-14, Sum P(3) = 2.0e-14
Identities = 9/15 (60%), Positives = 10/15 (66%)
Query: 379 CAPSNSALDEIVLRL 393
CAPSNS D + RL
Sbjct: 554 CAPSNSGADLLCQRL 568
Score = 44 (20.5 bits), Expect = 5.8e-11, Sum P(3) = 5.8e-11
Identities = 11/37 (29%), Positives = 18/37 (48%)
Query: 281 PGTGKTQTILGLLSAILHATPARVHSKGGLREIKRGP 317
PG+ ++ LL+ I H +H K G+ +GP
Sbjct: 95 PGSNISKQHRSLLARIFHDRAEYLHGKHGVDVEVQGP 131
>UNIPROTKB|F1SBP9 [details] [associations]
symbol:MOV10 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0035279 "mRNA cleavage involved in gene silencing by
miRNA" evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] GO:GO:0000932 GO:GO:0035279 InterPro:IPR026122
PANTHER:PTHR10887:SF17 GeneTree:ENSGT00550000074391 CTD:4343
OMA:VRFFKLD EMBL:CU861480 RefSeq:XP_003481536.1 UniGene:Ssc.19573
Ensembl:ENSSSCT00000007422 GeneID:100521086 KEGG:ssc:100521086
Uniprot:F1SBP9
Length = 1001
Score = 197 (74.4 bits), Expect = 2.6e-14, Sum P(3) = 2.6e-14
Identities = 62/208 (29%), Positives = 105/208 (50%)
Query: 550 KMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR-DWHEYRCFG-PFSFFDIHEGK 607
K+L+ YR HP + P++ +Y+ L+ +DV D W G P F + GK
Sbjct: 727 KLLRN-YRSHPTILDIPNQLYYEGELQACADVVDRERFCRWEGLPRQGFPIIFHGVM-GK 784
Query: 608 ESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLA-----IISPYRHQVKQFQER 662
+ + S S+ N +E V +L++ + K ++L+ +ISPYR QV++ +
Sbjct: 785 DEREGNSPSFFNPEEAATVTSYLKQLLTSSSK-KGKARLSPRSVGVISPYRKQVEKIRHC 843
Query: 663 F----KETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKK-------SIGFLADYR 711
KE G++ K + + +V+ QG+E+ V + S VR+S ++GFL + +
Sbjct: 844 ITKLDKELRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQSFVQLDLDFNLGFLKNPK 903
Query: 712 RMNVGITRAKSSILVVGCASTLREDKHW 739
R NV +TRAK+ ++VVG L D W
Sbjct: 904 RFNVAVTRAKALLIVVGNPLLLGHDPDW 931
Score = 133 (51.9 bits), Expect = 1.6e-07, Sum P(3) = 1.6e-07
Identities = 60/204 (29%), Positives = 95/204 (46%)
Query: 459 LNEAVIVCSTLSFSGSALLSK---LNHGFDVVIIDEAAQAVEPATLVPLATGCK------ 509
L E ++ +TL + S L+S ++H F + IDEA ++EP +LV +A +
Sbjct: 613 LQEYRVLITTL-ITASRLVSAQFPIDH-FTHIFIDEAGHSMEPESLVAIAGLLEVKEADN 670
Query: 510 ---QVFLVGDPVQLPATVISPVAEHLGYGTSLFKRL--QRA-------GY-P---VKMLK 553
Q+ L GDP QL + P+ + G G SL +RL A GY P K+L+
Sbjct: 671 PGGQLVLAGDPRQLGPVLRCPLTQKHGLGYSLLERLLTYNALYKKGPDGYNPQFITKLLR 730
Query: 554 TQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR-DWHEYRCFG-PFSFFDIHEGKESQP 611
YR HP + P++ +Y+ L+ +DV D W G P F + GK+ +
Sbjct: 731 N-YRSHPTILDIPNQLYYEGELQACADVVDRERFCRWEGLPRQGFPIIFHGVM-GKDERE 788
Query: 612 AGSGSWINIDEVDFVLLLFHKLIS 635
S S+ N +E V +L++
Sbjct: 789 GNSPSFFNPEEAATVTSYLKQLLT 812
Score = 78 (32.5 bits), Expect = 2.6e-14, Sum P(3) = 2.6e-14
Identities = 26/97 (26%), Positives = 45/97 (46%)
Query: 212 EYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIKENHNASQLEAIHE---G 268
++ AL G P ++ + + K+ L++ E+ N QL+A+ G
Sbjct: 457 QHRALELTGRWPLWPMLFPVASRGVPLLPSDVKLK--LYDRSLES-NPEQLQAMKHIVMG 513
Query: 269 LLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVH 305
R A +I GPPGTGKT T++ + ++ P + H
Sbjct: 514 TTRPAPYIIFGPPGTGKTVTLVEAIKQVVKHLP-KAH 549
Score = 44 (20.5 bits), Expect = 2.6e-14, Sum P(3) = 2.6e-14
Identities = 9/15 (60%), Positives = 10/15 (66%)
Query: 379 CAPSNSALDEIVLRL 393
CAPSNS D + RL
Sbjct: 553 CAPSNSGADLLCQRL 567
Score = 42 (19.8 bits), Expect = 9.2e-11, Sum P(2) = 9.2e-11
Identities = 13/36 (36%), Positives = 18/36 (50%)
Query: 526 SPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPE 561
SP+A L T+ FKR Q G PV + + P+
Sbjct: 244 SPLAAQLK-PTTPFKRTQITGNPVVTNRVEEGERPD 278
>WB|WBGene00001258 [details] [associations]
symbol:emb-4 species:6239 "Caenorhabditis elegans"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0097157
"pre-mRNA intronic binding" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0010171 "body morphogenesis" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] InterPro:IPR024860 InterPro:IPR026300
PIRSF:PIRSF038901 GO:GO:0009792 GO:GO:0040010 GO:GO:0010171
GO:GO:0040011 GO:GO:0005681 GO:GO:0000398 eggNOG:COG1112
HOGENOM:HOG000170551 KO:K12874 OMA:RTKAVGH GO:GO:0097157
PANTHER:PTHR10887:SF5 GeneTree:ENSGT00700000104467 EMBL:AL132853
GeneID:180232 KEGG:cel:CELE_Y80D3A.2 CTD:180232
RefSeq:NP_001256831.1 ProteinModelPortal:Q9U1Q7 SMR:Q9U1Q7
PaxDb:Q9U1Q7 PRIDE:Q9U1Q7 EnsemblMetazoa:Y80D3A.2a.1
EnsemblMetazoa:Y80D3A.2a.2 UCSC:Y80D3A.2.1 WormBase:Y80D3A.2a
InParanoid:Q9U1Q7 NextBio:908508 ArrayExpress:Q9U1Q7 Uniprot:Q9U1Q7
Length = 1467
Score = 191 (72.3 bits), Expect = 2.8e-14, Sum P(3) = 2.8e-14
Identities = 78/299 (26%), Positives = 137/299 (45%)
Query: 448 RKDRDSIRSAILNEAVIVCSTLSFSGSAL--LSKLNHGFDVVIIDEAAQAVEPATLVPLA 505
R RD ++ EA I+ T + + L KL +D ++++EAAQ +E T +PL
Sbjct: 1020 RNGRDRTEYLLVKEAKIIAMTCTHAALRRNELVKLGFRYDNIVMEEAAQILEVETFIPLL 1079
Query: 506 T-----G---CKQVFLVGDPVQLPATVISPVAE-HLGYGTSLFKRLQRAGYPVKMLKTQY 556
G K+ ++GD QLP V + + + SLF RL R P L Q
Sbjct: 1080 LQNPQDGHNRLKRWIMIGDHHQLPPVVQNQAFQKYSNMEQSLFARLVRLSVPNVQLDRQG 1139
Query: 557 RMHPEVRSFPSREFYDEALEDGSDVEDYTT-RDWHEYRCFGPFSFFDIHE--GK-ESQPA 612
R ++ + L + V+ ++ + F PF F DI + G E+QP+
Sbjct: 1140 RARAQIAELYQWRY--NGLGNLPHVDGLPQFQNANAGFAF-PFQFIDIPDFNGHGETQPS 1196
Query: 613 GSGSWINIDEVDFVLLLF-HKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVES 671
+ N+ E ++ L+ + I YP + +++I++ Y Q + ++ F+
Sbjct: 1197 PH-FYQNLGEAEYACALYTYMRILGYP----AEKISILTTYNGQAQLIRDVFQRRCDTNP 1251
Query: 672 Q--KVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVG 728
++TVD QG++ D I S V+ ++IG + D RR+ V ++RA+ + V+G
Sbjct: 1252 LIGMPAKVSTVDKYQGQQNDFIILSLVKT---RNIGHIRDVRRLVVALSRARLGLYVLG 1307
Score = 89 (36.4 bits), Expect = 2.8e-14, Sum P(3) = 2.8e-14
Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 260 SQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATP 301
SQ+EAI G+ + ++ GPPGTGKT + ++S I H P
Sbjct: 809 SQVEAIKSGM-QPGLTMVVGPPGTGKTDVAVQIISNIYHNWP 849
Score = 50 (22.7 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 9/19 (47%), Positives = 13/19 (68%)
Query: 249 LHEYIKENHNASQLEAIHE 267
LH+Y+ N N QLE+ +E
Sbjct: 472 LHDYLLRNFNLFQLESTYE 490
Score = 45 (20.9 bits), Expect = 2.8e-14, Sum P(3) = 2.8e-14
Identities = 24/107 (22%), Positives = 46/107 (42%)
Query: 38 DKNSKKVDRGKLGLREVKDTYKDV---DDYLATFEPLLFEEVKAQIIQKKDEEEVQEWKL 94
D N ++D + ++ DT+ + D F+ +L + ++ + E V +W
Sbjct: 644 DPNQYRIDMEQGTKDDIYDTFNLIVRRDSKTNNFKAVL-QTIRDLL---NTECVVPDWLT 699
Query: 95 RLVMECGEADGFHLPSVTYEADEVESISPNDLLLLSKEEFKEGSTFP 141
+++ GE D H ++ E++ ND L S KE +FP
Sbjct: 700 DVILGYGEPDSAHYSKLSSAVPELDF---NDTFL-SFAHVKE--SFP 740
>UNIPROTKB|J9P7Z9 [details] [associations]
symbol:MOV10 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 SMART:SM00382 GO:GO:0005524 GO:GO:0017111
InterPro:IPR026122 PANTHER:PTHR10887:SF17
GeneTree:ENSGT00550000074391 EMBL:AAEX03011080 EMBL:AAEX03011081
Ensembl:ENSCAFT00000044224 Uniprot:J9P7Z9
Length = 983
Score = 197 (74.4 bits), Expect = 3.0e-14, Sum P(3) = 3.0e-14
Identities = 63/208 (30%), Positives = 104/208 (50%)
Query: 550 KMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR-DWHEYRCFG-PFSFFDIHEGK 607
K+L+ YR HP + P++ +Y+ L+ +DV D W G P F + GK
Sbjct: 707 KLLRN-YRSHPTILDIPNQLYYEGELQACADVVDRERFCHWEGLPRQGFPIIFHGVM-GK 764
Query: 608 ESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLA-----IISPYRHQVKQFQER 662
+ + S S+ N +E V + KL+ K ++L+ +ISPYR QV++ +
Sbjct: 765 DEREGNSPSFFNPEEAATVTS-YLKLLLAPSSKKGKARLSPRSVGVISPYRKQVEKIRHC 823
Query: 663 F----KETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKK-------SIGFLADYR 711
KE G++ K + + +V+ QG+E+ V + S VR+S ++GFL + +
Sbjct: 824 ITKLDKELRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQSFVQLDLDFNLGFLKNPK 883
Query: 712 RMNVGITRAKSSILVVGCASTLREDKHW 739
R NV +TRAK+ ++VVG L D W
Sbjct: 884 RFNVAVTRAKALLIVVGNPLLLGHDPDW 911
Score = 139 (54.0 bits), Expect = 4.5e-08, Sum P(3) = 4.5e-08
Identities = 67/220 (30%), Positives = 103/220 (46%)
Query: 459 LNEAVIVCSTLSFSGSALLSK---LNHGFDVVIIDEAAQAVEPATLVPLATGCK------ 509
L E ++ +TL + S L+S ++H F + IDEA ++EP +LV +A +
Sbjct: 593 LQEYRVLITTL-ITASRLVSAQFPIDH-FTHIFIDEAGHSMEPESLVAIAGLMEVKETDN 650
Query: 510 ---QVFLVGDPVQLPATVISPVAEHLGYGTSLFKRL--QRA-------GY-P---VKMLK 553
Q+ L GDP QL + SP+ + G G SL +RL A GY P K+L+
Sbjct: 651 PGGQLVLAGDPRQLGPVLRSPLTQKHGLGYSLLERLLTYNALYKKGSNGYNPQFITKLLR 710
Query: 554 TQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR-DWHEYRCFG-PFSFFDIHEGKESQP 611
YR HP + P++ +Y+ L+ +DV D W G P F + GK+ +
Sbjct: 711 N-YRSHPTILDIPNQLYYEGELQACADVVDRERFCHWEGLPRQGFPIIFHGVM-GKDERE 768
Query: 612 AGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISP 651
S S+ N +E V + KL+ + P K A +SP
Sbjct: 769 GNSPSFFNPEEAATVTS-YLKLL-LAPSSKKGK--ARLSP 804
Score = 77 (32.2 bits), Expect = 3.0e-14, Sum P(3) = 3.0e-14
Identities = 27/97 (27%), Positives = 45/97 (46%)
Query: 212 EYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIKENHNASQLEA---IHEG 268
++ AL G P ++ + + K+ L++ E+ N QL+A I G
Sbjct: 437 QHRALELTGRWPLWPMLFPVASRGVPLLPSDVKLK--LYDRSLES-NPEQLQAMKYIIMG 493
Query: 269 LLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVH 305
R A +I GPPGTGKT T++ + ++ P + H
Sbjct: 494 TTRPAPYIIFGPPGTGKTVTLVEAIKQVVKHLP-KAH 529
Score = 44 (20.5 bits), Expect = 3.0e-14, Sum P(3) = 3.0e-14
Identities = 9/15 (60%), Positives = 10/15 (66%)
Query: 379 CAPSNSALDEIVLRL 393
CAPSNS D + RL
Sbjct: 533 CAPSNSGADLLCQRL 547
>UNIPROTKB|F1P7T4 [details] [associations]
symbol:MOV10 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0035279 "mRNA cleavage involved in gene
silencing by miRNA" evidence=IEA] [GO:0000932 "cytoplasmic mRNA
processing body" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 GO:GO:0000932 GO:GO:0035279 InterPro:IPR026122
PANTHER:PTHR10887:SF17 GeneTree:ENSGT00550000074391 CTD:4343
OMA:VRFFKLD EMBL:AAEX03011080 EMBL:AAEX03011081 RefSeq:XP_540337.3
Ensembl:ENSCAFT00000021339 GeneID:483219 KEGG:cfa:483219
Uniprot:F1P7T4
Length = 1003
Score = 197 (74.4 bits), Expect = 3.3e-14, Sum P(3) = 3.3e-14
Identities = 63/208 (30%), Positives = 104/208 (50%)
Query: 550 KMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR-DWHEYRCFG-PFSFFDIHEGK 607
K+L+ YR HP + P++ +Y+ L+ +DV D W G P F + GK
Sbjct: 727 KLLRN-YRSHPTILDIPNQLYYEGELQACADVVDRERFCHWEGLPRQGFPIIFHGVM-GK 784
Query: 608 ESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLA-----IISPYRHQVKQFQER 662
+ + S S+ N +E V + KL+ K ++L+ +ISPYR QV++ +
Sbjct: 785 DEREGNSPSFFNPEEAATVTS-YLKLLLAPSSKKGKARLSPRSVGVISPYRKQVEKIRHC 843
Query: 663 F----KETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKK-------SIGFLADYR 711
KE G++ K + + +V+ QG+E+ V + S VR+S ++GFL + +
Sbjct: 844 ITKLDKELRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQSFVQLDLDFNLGFLKNPK 903
Query: 712 RMNVGITRAKSSILVVGCASTLREDKHW 739
R NV +TRAK+ ++VVG L D W
Sbjct: 904 RFNVAVTRAKALLIVVGNPLLLGHDPDW 931
Score = 139 (54.0 bits), Expect = 4.8e-08, Sum P(3) = 4.8e-08
Identities = 67/220 (30%), Positives = 103/220 (46%)
Query: 459 LNEAVIVCSTLSFSGSALLSK---LNHGFDVVIIDEAAQAVEPATLVPLATGCK------ 509
L E ++ +TL + S L+S ++H F + IDEA ++EP +LV +A +
Sbjct: 613 LQEYRVLITTL-ITASRLVSAQFPIDH-FTHIFIDEAGHSMEPESLVAIAGLMEVKETDN 670
Query: 510 ---QVFLVGDPVQLPATVISPVAEHLGYGTSLFKRL--QRA-------GY-P---VKMLK 553
Q+ L GDP QL + SP+ + G G SL +RL A GY P K+L+
Sbjct: 671 PGGQLVLAGDPRQLGPVLRSPLTQKHGLGYSLLERLLTYNALYKKGSNGYNPQFITKLLR 730
Query: 554 TQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR-DWHEYRCFG-PFSFFDIHEGKESQP 611
YR HP + P++ +Y+ L+ +DV D W G P F + GK+ +
Sbjct: 731 N-YRSHPTILDIPNQLYYEGELQACADVVDRERFCHWEGLPRQGFPIIFHGVM-GKDERE 788
Query: 612 AGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISP 651
S S+ N +E V + KL+ + P K A +SP
Sbjct: 789 GNSPSFFNPEEAATVTS-YLKLL-LAPSSKKGK--ARLSP 824
Score = 77 (32.2 bits), Expect = 3.3e-14, Sum P(3) = 3.3e-14
Identities = 27/97 (27%), Positives = 45/97 (46%)
Query: 212 EYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIKENHNASQLEA---IHEG 268
++ AL G P ++ + + K+ L++ E+ N QL+A I G
Sbjct: 457 QHRALELTGRWPLWPMLFPVASRGVPLLPSDVKLK--LYDRSLES-NPEQLQAMKYIIMG 513
Query: 269 LLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVH 305
R A +I GPPGTGKT T++ + ++ P + H
Sbjct: 514 TTRPAPYIIFGPPGTGKTVTLVEAIKQVVKHLP-KAH 549
Score = 44 (20.5 bits), Expect = 3.3e-14, Sum P(3) = 3.3e-14
Identities = 9/15 (60%), Positives = 10/15 (66%)
Query: 379 CAPSNSALDEIVLRL 393
CAPSNS D + RL
Sbjct: 553 CAPSNSGADLLCQRL 567
>RGD|1598327 [details] [associations]
symbol:Mov10 "Moloney leukemia virus 10" species:10116 "Rattus
norvegicus" [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=IEA;ISO] InterPro:IPR003593 SMART:SM00382
RGD:1598327 GO:GO:0005524 GO:GO:0017111 GO:GO:0000932 GO:GO:0035279
InterPro:IPR026122 PANTHER:PTHR10887:SF17
GeneTree:ENSGT00550000074391 EMBL:CH474015 OrthoDB:EOG4SXNC4
CTD:4343 IPI:IPI00192859 RefSeq:NP_001101181.1 UniGene:Rn.3508
Ensembl:ENSRNOT00000018061 GeneID:310756 KEGG:rno:310756
UCSC:RGD:1598327 NextBio:662562 Uniprot:D3ZUC2
Length = 1004
Score = 199 (75.1 bits), Expect = 4.1e-14, Sum P(3) = 4.1e-14
Identities = 62/213 (29%), Positives = 108/213 (50%)
Query: 550 KMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR-DWHEYRCFG-PFSFFDIHEGK 607
K+L+ YR HP + P++ +YD L+ +DV D W G P F + GK
Sbjct: 728 KLLRN-YRSHPTILDIPNQLYYDGELQACADVVDRERFCRWEGLPQQGFPIIFHGVM-GK 785
Query: 608 ESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLA-----IISPYRHQVKQFQ-- 660
+ + S S+ N +E V +L++ + K ++L+ +ISPYR QV++ +
Sbjct: 786 DEREGNSPSFFNPEEAATVTSYLRQLLAPSSK-KGKARLSPRSVGVISPYRKQVEKIRYC 844
Query: 661 --ERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKK-------SIGFLADYR 711
+ +E G++ K + + +V+ QG+E+ V + S VR+S ++GFL + +
Sbjct: 845 ITKLDRELRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQSFVQLDLDFNLGFLKNPK 904
Query: 712 RMNVGITRAKSSILVVGCASTLREDKHWNNLVK 744
R NV +TRAK+ ++VVG L D W ++
Sbjct: 905 RFNVAVTRAKALLIVVGNPLLLGHDPDWKTFLE 937
Score = 151 (58.2 bits), Expect = 5.3e-09, Sum P(3) = 5.3e-09
Identities = 68/220 (30%), Positives = 104/220 (47%)
Query: 459 LNEAVIVCSTLSFSGSALLSK---LNHGFDVVIIDEAAQAVEPATLVPLA-------TGC 508
L + ++ +TL + S L+S ++H F + IDEA +EP +LV +A TG
Sbjct: 614 LQQYRVLITTL-ITASRLVSAQFPIDH-FTHIFIDEAGHCMEPESLVAIAGLMDVKETGN 671
Query: 509 K--QVFLVGDPVQLPATVISPVAEHLGYGTSLFKRL-------QRA--GY-P---VKMLK 553
Q+ L GDP QL + SP+A+ G G SL +RL ++ GY P K+L+
Sbjct: 672 PGGQLVLAGDPRQLGPVLRSPLAQKHGLGYSLLERLLTYNSLYKKGPNGYDPQFITKLLR 731
Query: 554 TQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR-DWHEYRCFG-PFSFFDIHEGKESQP 611
YR HP + P++ +YD L+ +DV D W G P F + GK+ +
Sbjct: 732 N-YRSHPTILDIPNQLYYDGELQACADVVDRERFCRWEGLPQQGFPIIFHGVM-GKDERE 789
Query: 612 AGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISP 651
S S+ N +E V +L++ P K A +SP
Sbjct: 790 GNSPSFFNPEEAATVTSYLRQLLA--PSSKKGK--ARLSP 825
Score = 78 (32.5 bits), Expect = 4.1e-14, Sum P(3) = 4.1e-14
Identities = 20/51 (39%), Positives = 29/51 (56%)
Query: 258 NASQLEAI-H--EGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVH 305
N QL+A+ H G R A +I GPPGTGKT T++ + ++ P + H
Sbjct: 501 NPEQLQAMKHIVRGTTRPAPYIIFGPPGTGKTVTLVEAIKQVVKHLP-KAH 550
Score = 44 (20.5 bits), Expect = 1.1e-10, Sum P(3) = 1.1e-10
Identities = 11/37 (29%), Positives = 18/37 (48%)
Query: 281 PGTGKTQTILGLLSAILHATPARVHSKGGLREIKRGP 317
PG+ ++ LL+ I H +H K G+ +GP
Sbjct: 95 PGSSISKQHRSLLARIFHDRAEYLHGKHGVDVEVQGP 131
Score = 40 (19.1 bits), Expect = 4.1e-14, Sum P(3) = 4.1e-14
Identities = 8/15 (53%), Positives = 9/15 (60%)
Query: 379 CAPSNSALDEIVLRL 393
C PSNS D + RL
Sbjct: 554 CTPSNSGADLLCQRL 568
>UNIPROTKB|F6QXW0 [details] [associations]
symbol:dna2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:8364 "Xenopus (Silurana)
tropicalis" [GO:0000076 "DNA replication checkpoint" evidence=ISS]
[GO:0000729 "DNA double-strand break processing" evidence=ISS]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0003678 "DNA helicase
activity" evidence=ISS] [GO:0004518 "nuclease activity"
evidence=ISS] [GO:0006260 "DNA replication" evidence=ISS]
[GO:0017108 "5'-flap endonuclease activity" evidence=ISS]
[GO:0032508 "DNA duplex unwinding" evidence=ISS] [GO:0033567 "DNA
replication, Okazaki fragment processing" evidence=ISS] [GO:0043139
"5'-3' DNA helicase activity" evidence=ISS] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=ISS]
InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696 GO:GO:0005739
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0051539 GO:GO:0000729 GO:GO:0017108 GO:GO:0000076
GO:GO:0043139 GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14
GeneTree:ENSGT00550000074852 OMA:EHESLCH EMBL:AAMC01051984
EMBL:AAMC01051985 EMBL:AAMC01051986 Ensembl:ENSXETT00000016310
Uniprot:F6QXW0
Length = 1048
Score = 188 (71.2 bits), Expect = 4.3e-14, Sum P(2) = 4.3e-14
Identities = 66/225 (29%), Positives = 111/225 (49%)
Query: 525 ISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSD-VED 583
+S V E LG SLFKRL+R V L QYRM+ ++ + ++ Y+ LE SD V +
Sbjct: 793 VSLVRE-LGMSESLFKRLERNQEAVVQLTVQYRMNSQIMALSNKLVYEGRLECASDRVSN 851
Query: 584 YTTRDWHEYRCFGPFSFFDIHEG---KES-QPAGSGSWINIDEVDFVLLLFHKLISMYPQ 639
+ H F + E K+ +P+ ++N +++ + IS + +
Sbjct: 852 AVVKLPHIKTLLLELEFRESQESMWIKDVLEPSNPVCFLNTEKIPALETEEKGGISNWIE 911
Query: 640 LK---SSSQLAIISPYRHQ----VKQFQERFK---ETFGVESQKVVDITTVDGCQGREKD 689
K ++L + + R + ++++ K F S V++ TVD QGR+K
Sbjct: 912 AKLVFCLTKLFLKAGCRPSDIGIIAPYRQQLKVISNYFNSLSASAVEVNTVDKYQGRDKS 971
Query: 690 VAIFSCVRASDKKSIG-FLADYRRMNVGITRAKSSILVVGCASTL 733
V I S VR++ +G L D+RR+NV +TRAK ++++GC TL
Sbjct: 972 VIIVSFVRSNIDGKLGDLLKDWRRLNVALTRAKHKLIMLGCVPTL 1016
Score = 84 (34.6 bits), Expect = 4.3e-14, Sum P(2) = 4.3e-14
Identities = 21/41 (51%), Positives = 25/41 (60%)
Query: 258 NASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILH 298
N Q +A+ LL K + LI G PGTGKT TI L+S LH
Sbjct: 628 NKPQKQAMKRVLLSKDYTLIVGMPGTGKTTTICTLVST-LH 667
>UNIPROTKB|F8VR31 [details] [associations]
symbol:DNA2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:9606 "Homo sapiens" [GO:0017108
"5'-flap endonuclease activity" evidence=IEA] [GO:0033567 "DNA
replication, Okazaki fragment processing" evidence=IEA] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=IEA]
InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696 GO:GO:0017108
GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14 EMBL:AL136233
HGNC:HGNC:2939 IPI:IPI01022599 ProteinModelPortal:F8VR31
Ensembl:ENST00000551118 UCSC:uc001jog.2 ArrayExpress:F8VR31
Bgee:F8VR31 Uniprot:F8VR31
Length = 807
Score = 174 (66.3 bits), Expect = 5.0e-14, Sum P(2) = 5.0e-14
Identities = 43/121 (35%), Positives = 71/121 (58%)
Query: 615 GSWINIDEVDFVLLLFHKLISMYPQLKSS-SQLAIISPYRHQVKQFQERFKETFGVESQK 673
G N+ E L++F L S++ + S S + II+PYR Q+K + + G+
Sbjct: 671 GGVSNVTEAK--LIVF--LTSIFVKAGCSPSDIGIIAPYRQQLKIINDLLARSIGM---- 722
Query: 674 VVDITTVDGCQGREKDVAIFSCVRASDKKSIG-FLADYRRMNVGITRAKSSILVVGCAST 732
V++ TVD QGR+K + + S VR++ ++G L D+RR+NV ITRAK ++++GC +
Sbjct: 723 -VEVNTVDKYQGRDKSIVLVSFVRSNKDGTVGELLKDWRRLNVAITRAKHKLILLGCVPS 781
Query: 733 L 733
L
Sbjct: 782 L 782
Score = 95 (38.5 bits), Expect = 5.0e-14, Sum P(2) = 5.0e-14
Identities = 47/167 (28%), Positives = 76/167 (45%)
Query: 160 RMYLAGE---VIHINKDAVKSQRLLNIHSLITSSVSAV-EKRLFSL----KICSLSTIAR 211
R+ ++GE + +++ VK + + L+ ++S + E LF L K C + T
Sbjct: 517 RVIVSGEERSLFALSRGYVKEINMTTVTCLLDRNLSVLPESTLFRLDQEEKNCDIDTPLG 576
Query: 212 EYLAL--RSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIK---ENHNASQLEAIH 266
L + S +DLI+ E S S +P + + + N Q +A+
Sbjct: 577 NLSKLMENTFVSKKLRDLIIDFREPQFISYLSS-VLPHDAKDTVACILKGLNKPQRQAMK 635
Query: 267 EGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLREI 313
+ LL K + LI G PGTGKT TI L+ A P +V KGG+ +
Sbjct: 636 KVLLSKDYTLIVGMPGTGKTTTICTLVPA-----PEQVE-KGGVSNV 676
>CGD|CAL0002159 [details] [associations]
symbol:DNA2 species:5476 "Candida albicans" [GO:0000784
"nuclear chromosome, telomeric region" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0031860 "telomeric 3' overhang
formation" evidence=IEA] [GO:0000733 "DNA strand renaturation"
evidence=IEA] [GO:0000706 "meiotic DNA double-strand break
processing" evidence=IEA] [GO:0001302 "replicative cell aging"
evidence=IEA] [GO:0043137 "DNA replication, removal of RNA primer"
evidence=IEA] [GO:0042162 "telomeric DNA binding" evidence=IEA]
[GO:0017108 "5'-flap endonuclease activity" evidence=IEA]
[GO:0000014 "single-stranded DNA specific endodeoxyribonuclease
activity" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] InterPro:IPR026851 InterPro:IPR014808
CGD:CAL0002159 Pfam:PF08696 eggNOG:COG1112 GO:GO:0017108
GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14 KO:K10742
InterPro:IPR022765 Pfam:PF01930 EMBL:AACQ01000161 EMBL:AACQ01000157
RefSeq:XP_712310.1 RefSeq:XP_712454.1 ProteinModelPortal:Q59RL2
STRING:Q59RL2 GeneID:3645932 GeneID:3646072 KEGG:cal:CaO19.1192
KEGG:cal:CaO19.8783 Uniprot:Q59RL2
Length = 1426
Score = 198 (74.8 bits), Expect = 1.4e-13, Sum P(4) = 1.4e-13
Identities = 82/320 (25%), Positives = 150/320 (46%)
Query: 465 VCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATV 524
V +T S + + L + FD I+DEA+Q P +L PL K+ +VGD QL V
Sbjct: 1076 VIATTCLSITDVCFNLRYSFDYCIVDEASQITLPVSLGPLRFA-KKFVMVGDHDQLQPLV 1134
Query: 525 ISP---VAEHLGYGTSLFKRLQRAGYP--VKMLKTQYRMHPEVRSFPSREFYDEALEDGS 579
P V + L SLF L + +P V L QYRM+ ++ + + Y+ L+ GS
Sbjct: 1135 THPDKRVKQELS--RSLFSLLAKE-HPDSVSHLTYQYRMNSDIMNVCNTLIYNNKLKCGS 1191
Query: 580 D-VEDYTTRDWHEYRCFGPFSFFDIHEGKE-----SQPAGSGSWINIDEV--------DF 625
+ V + + H F D+ + + +++ D V +
Sbjct: 1192 EQVAQNSLKIPHP-EVLNSFIGEDVSPDSQWIHKIFDEKNNVLFLDYDAVPAVEENVGEM 1250
Query: 626 VL-----LLFHKLIS--MYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDIT 678
V+ LL ++++ ++ +K ++ ++S YR Q+ ++ + + K ++I
Sbjct: 1251 VINTKEALLIQQIVNALVHGGVKED-EIGVMSFYRAQLSVLKKN------LNNLKDLEIL 1303
Query: 679 TVDGCQGREKDVAIFSCVRASDKKSIG-FLADYRRMNVGITRAKSSILVVGCASTLREDK 737
T D QGR+K+ I S VR++++K G + +YRR+NV TRAK+ ++++G TL ++
Sbjct: 1304 TADQYQGRDKECIIISLVRSNERKFAGDLMKEYRRLNVATTRAKTKLIILGSRFTLSTNE 1363
Query: 738 HWNNLVKSAEKQDCLFRVSK 757
+ E + + + K
Sbjct: 1364 LTKTFIDYLENEKWYYPLPK 1383
Score = 73 (30.8 bits), Expect = 1.4e-13, Sum P(4) = 1.4e-13
Identities = 23/78 (29%), Positives = 37/78 (47%)
Query: 220 GSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIKENHNASQLEAIHEGLLRKAFVLIQG 279
G+ + L++ EK + + SW+IP E N Q+ A+ + + LI G
Sbjct: 938 GASQLRKLVVDL-EKPTFTAS-SWEIPDA------ETFNPDQIAALKKVFSADDYSLIVG 989
Query: 280 PPGTGKTQTILGLLSAIL 297
PGTGKT I L+ ++
Sbjct: 990 MPGTGKTTVIAQLIKVLV 1007
Score = 49 (22.3 bits), Expect = 1.4e-13, Sum P(4) = 1.4e-13
Identities = 22/87 (25%), Positives = 34/87 (39%)
Query: 6 DKPQDEASIFRFCKIILGWDYFRLVKESQERNDKNSKKVDRGKLGLRE--VKDTYKDVDD 63
DK QD+ ++ F K F L K NDK + G L VK KD
Sbjct: 810 DKSQDQQFVYTFAKAE-NPSRFNLAKSQVTINDKVIISDEEGHFALTTGYVKQITKDFV- 867
Query: 64 YLATFEPLLFEEVKAQIIQKKDEEEVQ 90
++T ++ + K + K + + Q
Sbjct: 868 VVSTRRKIITSDYKLKNYNKANNQVFQ 894
Score = 41 (19.5 bits), Expect = 1.4e-13, Sum P(4) = 1.4e-13
Identities = 13/35 (37%), Positives = 21/35 (60%)
Query: 382 SNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLK 416
+NSA+D I+L+L + I E +R P+ V +K
Sbjct: 1019 TNSAVDNILLKLKDLDI--EFLRIGYPQRVHKDIK 1051
>UNIPROTKB|Q9HCE1 [details] [associations]
symbol:MOV10 "Putative helicase MOV-10" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IDA] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=IDA] [GO:0005829 "cytosol" evidence=TAS]
[GO:0007219 "Notch signaling pathway" evidence=TAS] GO:GO:0005829
GO:GO:0005524 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006355 GO:GO:0007219 GO:GO:0006351
GO:GO:0003723 GO:GO:0004386 GO:GO:0000932 GO:GO:0035279
eggNOG:COG1112 InterPro:IPR026122 PANTHER:PTHR10887:SF17
EMBL:AL603832 HOGENOM:HOG000239755 OrthoDB:EOG4SXNC4 CTD:4343
OMA:VRFFKLD EMBL:AB046851 EMBL:AK074174 EMBL:AL833353 EMBL:BC002548
EMBL:BC004499 EMBL:BC009312 IPI:IPI00444452 IPI:IPI00444454
IPI:IPI00929442 RefSeq:NP_001123551.1 RefSeq:NP_066014.1
UniGene:Hs.514941 ProteinModelPortal:Q9HCE1 SMR:Q9HCE1
DIP:DIP-44158N IntAct:Q9HCE1 STRING:Q9HCE1 PhosphoSite:Q9HCE1
DMDM:24638063 PaxDb:Q9HCE1 PRIDE:Q9HCE1 DNASU:4343
Ensembl:ENST00000357443 Ensembl:ENST00000369645
Ensembl:ENST00000413052 Ensembl:ENST00000544796 GeneID:4343
KEGG:hsa:4343 UCSC:uc001eck.3 GeneCards:GC01P113215 HGNC:HGNC:7200
MIM:610742 neXtProt:NX_Q9HCE1 PharmGKB:PA30908 HOVERGEN:HBG052500
InParanoid:Q9HCE1 PhylomeDB:Q9HCE1 ChiTaRS:MOV10 GenomeRNAi:4343
NextBio:17098 ArrayExpress:Q9HCE1 Bgee:Q9HCE1 CleanEx:HS_MOV10
Genevestigator:Q9HCE1 GermOnline:ENSG00000155363 Uniprot:Q9HCE1
Length = 1003
Score = 189 (71.6 bits), Expect = 2.4e-13, Sum P(3) = 2.4e-13
Identities = 61/208 (29%), Positives = 105/208 (50%)
Query: 550 KMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR-DWHEYRCFG-PFSFFDIHEGK 607
K+L+ YR HP + P++ +Y+ L+ +DV D W G P F + GK
Sbjct: 727 KLLRN-YRSHPTILDIPNQLYYEGELQACADVVDRERFCRWAGLPRQGFPIIFHGVM-GK 784
Query: 608 ESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLA-----IISPYRHQVKQFQ-- 660
+ + S S+ N +E V + KL+ K ++L+ +ISPYR QV++ +
Sbjct: 785 DEREGNSPSFFNPEEAATVTS-YLKLLLAPSSKKGKARLSPRSVGVISPYRKQVEKIRYC 843
Query: 661 --ERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKK-------SIGFLADYR 711
+ +E G++ K + + +V+ QG+E+ V + S VR+S ++GFL + +
Sbjct: 844 ITKLDRELRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQSFVQLDLDFNLGFLKNPK 903
Query: 712 RMNVGITRAKSSILVVGCASTLREDKHW 739
R NV +TRAK+ +++VG L D W
Sbjct: 904 RFNVAVTRAKALLIIVGNPLLLGHDPDW 931
Score = 142 (55.0 bits), Expect = 2.3e-08, Sum P(3) = 2.3e-08
Identities = 66/219 (30%), Positives = 104/219 (47%)
Query: 459 LNEAVIVCSTLSFSGSALLSK--LNHGFDVVIIDEAAQAVEPATLVPLA-------TGCK 509
L E ++ +TL +G + ++ ++H F + IDEA +EP +LV +A TG
Sbjct: 613 LQEYRVLITTLITAGRLVSAQFPIDH-FTHIFIDEAGHCMEPESLVAIAGLMEVKETGDP 671
Query: 510 --QVFLVGDPVQLPATVISPVAEHLGYGTSLFKRL-------QRA--GY-P---VKMLKT 554
Q+ L GDP QL + SP+ + G G SL +RL ++ GY P K+L+
Sbjct: 672 GGQLVLAGDPRQLGPVLRSPLTQKHGLGYSLLERLLTYNSLYKKGPDGYDPQFITKLLRN 731
Query: 555 QYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR-DWHEYRCFG-PFSFFDIHEGKESQPA 612
YR HP + P++ +Y+ L+ +DV D W G P F + GK+ +
Sbjct: 732 -YRSHPTILDIPNQLYYEGELQACADVVDRERFCRWAGLPRQGFPIIFHGVM-GKDEREG 789
Query: 613 GSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISP 651
S S+ N +E V + KL+ + P K A +SP
Sbjct: 790 NSPSFFNPEEAATVTS-YLKLL-LAPSSKKGK--ARLSP 824
Score = 77 (32.2 bits), Expect = 2.4e-13, Sum P(3) = 2.4e-13
Identities = 19/51 (37%), Positives = 28/51 (54%)
Query: 258 NASQLEAIHE---GLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVH 305
N QL+A+ G R A +I GPPGTGKT T++ + ++ P + H
Sbjct: 500 NPEQLQAMRHIVTGTTRPAPYIIFGPPGTGKTVTLVEAIKQVVKHLP-KAH 549
Score = 44 (20.5 bits), Expect = 2.4e-13, Sum P(3) = 2.4e-13
Identities = 9/15 (60%), Positives = 10/15 (66%)
Query: 379 CAPSNSALDEIVLRL 393
CAPSNS D + RL
Sbjct: 553 CAPSNSGADLLCQRL 567
>RGD|1306223 [details] [associations]
symbol:Aqr "aquarius homolog (mouse)" species:10116 "Rattus
norvegicus" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=ISO]
[GO:0097157 "pre-mRNA intronic binding" evidence=IEA]
InterPro:IPR024860 InterPro:IPR026300 PIRSF:PIRSF038901 RGD:1306223
GO:GO:0005681 GO:GO:0000398 GO:GO:0097157 PANTHER:PTHR10887:SF5
IPI:IPI00389267 ProteinModelPortal:D3ZZP0
Ensembl:ENSRNOT00000011917 UCSC:RGD:1306223 ArrayExpress:D3ZZP0
Uniprot:D3ZZP0
Length = 1353
Score = 173 (66.0 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 73/295 (24%), Positives = 134/295 (45%)
Query: 448 RKDRDSIRSAILNEAVIVCSTLSFSGSAL--LSKLNHGFDVVIIDEAAQAVEPATLVPLA 505
R D + ++ EA I+ T + + L KL +D ++++EAAQ +E T +PL
Sbjct: 1018 RSGLDRSKYLLVKEAKIIAMTCTHAALKRHDLVKLGFKYDNILMEEAAQILEIETFIPLL 1077
Query: 506 --------TGCKQVFLVGDPVQLPATVISPVA--EHLGYGTSLFKRLQRAGYPVKMLKTQ 555
+ K+ ++GD QLP VI +A ++ SLF R R G P L Q
Sbjct: 1078 LQNPQDGFSRLKRWIMIGDHHQLPP-VIKNMAFQKYSNMEQSLFTRFVRVGVPTVDLDAQ 1136
Query: 556 YRMHPEVRSFPSREFYDEA-LEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGS 614
R + + + + + L + +++T + F + D ES+P
Sbjct: 1137 GRARASLCNLYNWRYKNLGNLPHVQLLPEFSTANAGLLYDFQLINVEDFQGVGESEP-NP 1195
Query: 615 GSWINIDEVDFVLLLFHKLISM-YPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQ- 672
+ N+ E ++V+ LF + + YP + +++I++ Y Q ++ G
Sbjct: 1196 YFYQNLGEAEYVVALFMYMCLLGYP----ADKISILTTYNGQKHLIRDIINRRCGNNPLI 1251
Query: 673 -KVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILV 726
+ +TTVD QG++ D + S VR +++G L D RR+ V ++RA+ + +
Sbjct: 1252 GRPNKVTTVDRFQGQQNDYILLSLVRT---RAVGHLRDVRRLVVAMSRARLGLYI 1303
Score = 88 (36.0 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 260 SQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPAR-----VHSKGGLREI 313
+Q+EAI G+ + ++ GPPGTGKT + ++S I H P + HS L ++
Sbjct: 805 TQIEAIRAGM-QPGLTMVVGPPGTGKTDVAVQIISNIYHNFPEQRTLIVTHSNQALNQL 862
Score = 46 (21.3 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 249 LHEYIKENHNASQLEAIHE 267
LH+Y+ N N +LE+ +E
Sbjct: 462 LHDYLLRNFNLFRLESTYE 480
>MGI|MGI:1276102 [details] [associations]
symbol:Aqr "aquarius" species:10090 "Mus musculus"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] [GO:0097157 "pre-mRNA
intronic binding" evidence=IEA] InterPro:IPR024860
InterPro:IPR026300 PIRSF:PIRSF038901 MGI:MGI:1276102 GO:GO:0000398
CTD:9716 eggNOG:COG1112 HOGENOM:HOG000170551 HOVERGEN:HBG080430
KO:K12874 OMA:RTKAVGH OrthoDB:EOG4ZPDTF GO:GO:0071013 GO:GO:0097157
PANTHER:PTHR10887:SF5 EMBL:AK122310 EMBL:AK145547 EMBL:AK151716
EMBL:BC042479 EMBL:U90333 IPI:IPI00330263 RefSeq:NP_033832.2
UniGene:Mm.2545 ProteinModelPortal:Q8CFQ3 SMR:Q8CFQ3
PhosphoSite:Q8CFQ3 PaxDb:Q8CFQ3 PRIDE:Q8CFQ3
Ensembl:ENSMUST00000043160 GeneID:11834 KEGG:mmu:11834
GeneTree:ENSGT00700000104467 InParanoid:Q8CFQ3 NextBio:279759
Bgee:Q8CFQ3 CleanEx:MM_AQR Genevestigator:Q8CFQ3
GermOnline:ENSMUSG00000040383 Uniprot:Q8CFQ3
Length = 1481
Score = 173 (66.0 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 73/295 (24%), Positives = 134/295 (45%)
Query: 448 RKDRDSIRSAILNEAVIVCSTLSFSGSAL--LSKLNHGFDVVIIDEAAQAVEPATLVPLA 505
R D + ++ EA I+ T + + L KL +D ++++EAAQ +E T +PL
Sbjct: 1022 RSGLDRSKYLLVKEAKIIAMTCTHAALKRHDLVKLGFKYDNILMEEAAQILEIETFIPLL 1081
Query: 506 --------TGCKQVFLVGDPVQLPATVISPVA--EHLGYGTSLFKRLQRAGYPVKMLKTQ 555
+ K+ ++GD QLP VI +A ++ SLF R R G P L Q
Sbjct: 1082 LQNPQDGFSRLKRWIMIGDHHQLPP-VIKNMAFQKYSNMEQSLFTRFVRVGVPTVDLDAQ 1140
Query: 556 YRMHPEVRSFPSREFYDEA-LEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGS 614
R + + + + + L + +++T + F + D ES+P
Sbjct: 1141 GRARASLCNLYNWRYKNLGNLPHVQLLPEFSTANAGLLYDFQLINVEDFQGVGESEP-NP 1199
Query: 615 GSWINIDEVDFVLLLFHKLISM-YPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQ- 672
+ N+ E ++V+ LF + + YP + +++I++ Y Q ++ G
Sbjct: 1200 YFYQNLGEAEYVVALFMYMCLLGYP----ADKISILTTYNGQKHLIRDIINRRCGNNPLI 1255
Query: 673 -KVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILV 726
+ +TTVD QG++ D + S VR +++G L D RR+ V ++RA+ + +
Sbjct: 1256 GRPNKVTTVDRFQGQQNDYILLSLVRT---RAVGHLRDVRRLVVAMSRARLGLYI 1307
Score = 88 (36.0 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 260 SQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPAR-----VHSKGGLREI 313
+Q+EAI G+ + ++ GPPGTGKT + ++S I H P + HS L ++
Sbjct: 805 TQIEAIRAGM-QPGLTMVVGPPGTGKTDVAVQIISNIYHNFPEQRTLIVTHSNQALNQL 862
Score = 46 (21.3 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 249 LHEYIKENHNASQLEAIHE 267
LH+Y+ N N +LE+ +E
Sbjct: 462 LHDYLLRNFNLFRLESTYE 480
>UNIPROTKB|O60306 [details] [associations]
symbol:AQR "Intron-binding protein aquarius" species:9606
"Homo sapiens" [GO:0097157 "pre-mRNA intronic binding"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] InterPro:IPR024860 InterPro:IPR026300
PIRSF:PIRSF038901 GO:GO:0000398 EMBL:AB011132 EMBL:EF553519
EMBL:BC036913 EMBL:BC070379 EMBL:BC108262 EMBL:BC127111
EMBL:BC127112 IPI:IPI00796835 PIR:T00333 RefSeq:NP_055506.1
UniGene:Hs.510958 ProteinModelPortal:O60306 SMR:O60306
IntAct:O60306 STRING:O60306 PhosphoSite:O60306 PaxDb:O60306
PRIDE:O60306 Ensembl:ENST00000156471 GeneID:9716 KEGG:hsa:9716
UCSC:uc001ziv.3 CTD:9716 GeneCards:GC15M035147 HGNC:HGNC:29513
MIM:610548 neXtProt:NX_O60306 PharmGKB:PA134869224 eggNOG:COG1112
HOGENOM:HOG000170551 HOVERGEN:HBG080430 InParanoid:O60306 KO:K12874
OMA:RTKAVGH OrthoDB:EOG4ZPDTF ChiTaRS:AQR GenomeRNAi:9716
NextBio:36525 Bgee:O60306 CleanEx:HS_AQR Genevestigator:O60306
GermOnline:ENSG00000021776 GO:GO:0071013 GO:GO:0097157
PANTHER:PTHR10887:SF5 Uniprot:O60306
Length = 1485
Score = 173 (66.0 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 73/295 (24%), Positives = 134/295 (45%)
Query: 448 RKDRDSIRSAILNEAVIVCSTLSFSGSAL--LSKLNHGFDVVIIDEAAQAVEPATLVPLA 505
R D + ++ EA I+ T + + L KL +D ++++EAAQ +E T +PL
Sbjct: 1018 RSGLDRSKYLLVKEAKIIAMTCTHAALKRHDLVKLGFKYDNILMEEAAQILEIETFIPLL 1077
Query: 506 --------TGCKQVFLVGDPVQLPATVISPVA--EHLGYGTSLFKRLQRAGYPVKMLKTQ 555
+ K+ ++GD QLP VI +A ++ SLF R R G P L Q
Sbjct: 1078 LQNPQDGFSRLKRWIMIGDHHQLPP-VIKNMAFQKYSNMEQSLFTRFVRVGVPTVDLDAQ 1136
Query: 556 YRMHPEVRSFPSREFYDEA-LEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGS 614
R + + + + + L + +++T + F + D ES+P
Sbjct: 1137 GRARASLCNLYNWRYKNLGNLPHVQLLPEFSTANAGLLYDFQLINVEDFQGVGESEP-NP 1195
Query: 615 GSWINIDEVDFVLLLFHKLISM-YPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQ- 672
+ N+ E ++V+ LF + + YP + +++I++ Y Q ++ G
Sbjct: 1196 YFYQNLGEAEYVVALFMYMCLLGYP----ADKISILTTYNGQKHLIRDIINRRCGNNPLI 1251
Query: 673 -KVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILV 726
+ +TTVD QG++ D + S VR +++G L D RR+ V ++RA+ + +
Sbjct: 1252 GRPNKVTTVDRFQGQQNDYILLSLVRT---RAVGHLRDVRRLVVAMSRARLGLYI 1303
Score = 88 (36.0 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 260 SQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPAR-----VHSKGGLREI 313
+Q+EAI G+ + ++ GPPGTGKT + ++S I H P + HS L ++
Sbjct: 805 TQIEAIRAGM-QPGLTMVVGPPGTGKTDVAVQIISNIYHNFPEQRTLIVTHSNQALNQL 862
Score = 46 (21.3 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 249 LHEYIKENHNASQLEAIHE 267
LH+Y+ N N +LE+ +E
Sbjct: 462 LHDYLLRNFNLFRLESTYE 480
>UNIPROTKB|F1MUW2 [details] [associations]
symbol:F1MUW2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0097157 "pre-mRNA intronic binding" evidence=IEA] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IEA] InterPro:IPR024860
InterPro:IPR026300 PIRSF:PIRSF038901 GO:GO:0000398 OMA:RTKAVGH
GO:GO:0071013 GO:GO:0097157 PANTHER:PTHR10887:SF5
GeneTree:ENSGT00700000104467 EMBL:DAAA02028420 EMBL:DAAA02028416
EMBL:DAAA02028417 EMBL:DAAA02028418 EMBL:DAAA02028419
IPI:IPI00852511 Ensembl:ENSBTAT00000016895 Uniprot:F1MUW2
Length = 1466
Score = 172 (65.6 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 73/295 (24%), Positives = 134/295 (45%)
Query: 448 RKDRDSIRSAILNEAVIVCSTLSFSGSAL--LSKLNHGFDVVIIDEAAQAVEPATLVPLA 505
R D + ++ EA I+ T + + L KL +D ++++EAAQ +E T +PL
Sbjct: 1000 RSGLDRSKYLLVKEAKIIAMTCTHAALKRHDLVKLGFKYDNILMEEAAQILEIETFIPLL 1059
Query: 506 --------TGCKQVFLVGDPVQLPATVISPVA--EHLGYGTSLFKRLQRAGYPVKMLKTQ 555
+ K+ ++GD QLP VI +A ++ SLF R R G P L Q
Sbjct: 1060 LQNPQDGFSRLKRWIMIGDHHQLPP-VIKNMAFQKYSNMEQSLFTRFVRVGVPTVDLDAQ 1118
Query: 556 YRMHPEVRSFPSREFYDEA-LEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGS 614
R + + + + + L + +++T + F + D ES+P
Sbjct: 1119 GRARASLCNLYNWRYKNLGNLPHVQLLLEFSTANAGLLYDFQLINVEDFQGVGESEP-NP 1177
Query: 615 GSWINIDEVDFVLLLFHKLISM-YPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQ- 672
+ N+ E ++V+ LF + + YP + +++I++ Y Q ++ G
Sbjct: 1178 YFYQNLGEAEYVVALFMYMCLLGYP----ADKISILTTYNGQKHLIRDIINRRCGSNPLI 1233
Query: 673 -KVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILV 726
+ +TTVD QG++ D + S VR +++G L D RR+ V ++RA+ + +
Sbjct: 1234 GRPNKVTTVDRFQGQQNDYILLSLVRT---RAVGHLRDVRRLVVAMSRARLGLYI 1285
Score = 88 (36.0 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 260 SQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPAR-----VHSKGGLREI 313
+Q+EAI G+ + ++ GPPGTGKT + ++S I H P + HS L ++
Sbjct: 788 TQIEAIRAGM-QPGLTMVVGPPGTGKTDVAVQIISNIYHNFPEQRTLIVTHSNQALNQL 845
Score = 46 (21.3 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 249 LHEYIKENHNASQLEAIHE 267
LH+Y+ N N +LE+ +E
Sbjct: 445 LHDYLLRNFNLFRLESTYE 463
>UNIPROTKB|F1PA16 [details] [associations]
symbol:AQR "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0097157 "pre-mRNA intronic binding" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
InterPro:IPR024860 InterPro:IPR026300 PIRSF:PIRSF038901
GO:GO:0000398 OMA:RTKAVGH GO:GO:0071013 GO:GO:0097157
PANTHER:PTHR10887:SF5 GeneTree:ENSGT00700000104467
EMBL:AAEX03016041 Ensembl:ENSCAFT00000013319 Uniprot:F1PA16
Length = 1483
Score = 174 (66.3 bits), Expect = 3.2e-12, Sum P(2) = 3.2e-12
Identities = 73/295 (24%), Positives = 134/295 (45%)
Query: 448 RKDRDSIRSAILNEAVIVCSTLSFSGSAL--LSKLNHGFDVVIIDEAAQAVEPATLVPLA 505
R D + ++ EA I+ T + + L KL +D ++++EAAQ +E T +PL
Sbjct: 1017 RSGLDRSKYLLVKEAKIIAMTCTHAALKRHDLVKLGFKYDNILMEEAAQILEIETFIPLL 1076
Query: 506 --------TGCKQVFLVGDPVQLPATVISPVA--EHLGYGTSLFKRLQRAGYPVKMLKTQ 555
+ K+ ++GD QLP VI +A ++ SLF R R G P L Q
Sbjct: 1077 LQNPQDGFSRLKRWIMIGDHHQLPP-VIKNMAFQKYSNMEQSLFTRFVRVGVPTVDLDAQ 1135
Query: 556 YRMHPEVRSFPSREFYDEA-LEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGS 614
R + + + + + L + +++T + F + D ES+P
Sbjct: 1136 GRARASLCNLYNWRYKNLGNLPHVQLLPEFSTANAGLLYDFQLINVEDFQGVGESEP-NP 1194
Query: 615 GSWINIDEVDFVLLLFHKLISM-YPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQ- 672
+ N+ E ++V+ LF + + YP + +++I++ Y Q ++ G
Sbjct: 1195 YFYQNLGEAEYVVALFMYMCLLGYP----ADKISILTTYNGQKHLIRDIINRRCGSNPLI 1250
Query: 673 -KVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILV 726
+ +TTVD QG++ D + S VR +++G L D RR+ V ++RA+ + +
Sbjct: 1251 GRPNKVTTVDRFQGQQNDYILLSLVRT---RAVGHLRDVRRLVVAMSRARLGLYI 1302
Score = 84 (34.6 bits), Expect = 3.2e-12, Sum P(2) = 3.2e-12
Identities = 16/39 (41%), Positives = 25/39 (64%)
Query: 260 SQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILH 298
+Q+EAI G+ + ++ GPPGTGKT + ++S I H
Sbjct: 805 TQIEAIRAGM-QPGLTMVVGPPGTGKTDVAVQIISNIYH 842
Score = 46 (21.3 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 249 LHEYIKENHNASQLEAIHE 267
LH+Y+ N N +LE+ +E
Sbjct: 462 LHDYLLRNFNLFRLESTYE 480
>ASPGD|ASPL0000064563 [details] [associations]
symbol:AN7014 species:162425 "Emericella nidulans"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0097157
"pre-mRNA intronic binding" evidence=IEA] InterPro:IPR024860
InterPro:IPR026300 PIRSF:PIRSF038901 GO:GO:0005681 EMBL:BN001304
GO:GO:0004386 GO:GO:0000398 HOGENOM:HOG000170551 GO:GO:0097157
PANTHER:PTHR10887:SF5 ProteinModelPortal:C8VC84
EnsemblFungi:CADANIAT00000462 OMA:TIYENEM Uniprot:C8VC84
Length = 1422
Score = 178 (67.7 bits), Expect = 7.2e-12, Sum P(2) = 7.2e-12
Identities = 76/305 (24%), Positives = 142/305 (46%)
Query: 448 RKDRDSIRSAILNEAVIVCSTLSFSGSAL--LSKLNHGFDVVIIDEAAQAVEPATLVPLA 505
R+ +D ++ EA I+ T + + ++ L +D ++++EAAQ E + +P A
Sbjct: 1022 RQPKDKANYLLVKEARIIAMTSTHAAMRRQEIADLGFHYDNIVMEEAAQITEVESFIPTA 1081
Query: 506 T-----G---CKQVFLVGDPVQLPATVISPVA--EHLGYGTSLFKRLQRAGYPVKMLKTQ 555
G K++ L GD +Q + +I +A ++ + SLF RL R G P L Q
Sbjct: 1082 LQNMKEGQLPLKRIVLCGDHLQ-NSPIIQNLAFRQYAHFEQSLFLRLIRLGVPAITLDQQ 1140
Query: 556 YRMHPEVRSFPSREFYD----EALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQP 611
R P + + + +E + + EY+ F + D E +P
Sbjct: 1141 GRARPSIAELFRWRYQNLGNLPIVEQAPEFKQANAGFQFEYQ-F--INVPDYQGTGEREP 1197
Query: 612 AGSGSWI-NIDEVDFVLLLFHKLISM-YPQLKSSSQLAIISPYRHQVKQFQERF-----K 664
+ ++ N+ E ++ + +F + + YP +S+++I++ Y Q ++ K
Sbjct: 1198 --TPHFVQNLGEAEYAVAIFQYMRLLGYP----ASKISILATYAGQTALIKDVLNHRCSK 1251
Query: 665 ET-FGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSS 723
T FG+ K+V TTVD QG + D I S R +++G+L D RR+ V ++RA+
Sbjct: 1252 NTLFGMP--KIV--TTVDRYQGEQNDYIILSLTRT---RTVGYLRDVRRLTVALSRARLG 1304
Query: 724 ILVVG 728
+ ++G
Sbjct: 1305 LYILG 1309
Score = 76 (31.8 bits), Expect = 7.2e-12, Sum P(2) = 7.2e-12
Identities = 19/59 (32%), Positives = 29/59 (49%)
Query: 260 SQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPAR-----VHSKGGLREI 313
+Q++AI G + +I GPPGTGKT +++ I H P HS L ++
Sbjct: 811 AQIQAIASGT-QPGLTVIVGPPGTGKTDVATQIINNIYHNFPTERTLLVAHSNQALNQL 868
>UNIPROTKB|F1NNW1 [details] [associations]
symbol:MOV10 "Putative helicase MOV-10" species:9031
"Gallus gallus" [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=IEA] GO:GO:0000932 GO:GO:0035279
InterPro:IPR026122 PANTHER:PTHR10887:SF17
GeneTree:ENSGT00550000074391 OMA:VRFFKLD IPI:IPI00594294
EMBL:AADN02045008 Ensembl:ENSGALT00000002368 Uniprot:F1NNW1
Length = 735
Score = 172 (65.6 bits), Expect = 9.4e-12, Sum P(2) = 9.4e-12
Identities = 57/188 (30%), Positives = 98/188 (52%)
Query: 577 DGS--DVED-YTTRDWHEYRCFG-PFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHK 632
+GS DV + Y T W E G P F + G++ + A S S+ N E++ V+ K
Sbjct: 518 EGSEPDVRNFYCT--WEELPNRGVPIIFHGVC-GEDEREAKSPSFFNTAEIEVVVQYLQK 574
Query: 633 LISMY-----PQLKSSSQLAIISPYRHQVKQFQERF--KETF--GVESQKVVDITTVDGC 683
L+ P + S ++ IISPYR QV++ + K+ + + + +V+
Sbjct: 575 LLQSQGRRGCPTI-SPKEIGIISPYRKQVEKIRLAITSKDPVLRALPDIGQLKVGSVEEF 633
Query: 684 QGREKDVAIFSCVRASDKK-------SIGFLADYRRMNVGITRAKSSILVVGCASTLRED 736
QG+E+ V + S VR+ + +GFL + +R+NV +TRAK+ ++VVG A+ L +D
Sbjct: 634 QGQERRVILISTVRSCSEYLQLDQTFRLGFLKNPKRLNVALTRAKALLIVVGNAAVLSKD 693
Query: 737 KHWNNLVK 744
HW+ ++
Sbjct: 694 PHWHRFLR 701
Score = 167 (63.8 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 90/286 (31%), Positives = 126/286 (44%)
Query: 379 CAPSNSALDEIVLRLLNTGIRDENIRSYTPK-IVRIGLKAHHSVNSVAIDHLVEQKRDDS 437
CAPSNSA D + RLL NI P+ I RI + + + V D DDS
Sbjct: 313 CAPSNSAADLLCQRLLT------NI---APRYIYRI-MASSANYKDVPADVRPCCNWDDS 362
Query: 438 AADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHG-FDVVIIDEAAQAV 496
+K ++K +L I+ +TL +G + + G F V IDE AV
Sbjct: 363 --EKCYVYPSKK--------LLKPYRILITTLVTAGRLVSANFPPGYFSHVFIDECGHAV 412
Query: 497 EPATLVPLA---------TGCK--QVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQR- 544
EP ++V +A T Q+ L GDP QL + SP+A G GTSL +RL
Sbjct: 413 EPESVVAIAGLLTTMDPDTNRNGGQLVLAGDPQQLGPVLRSPLAAQHGLGTSLLERLMLH 472
Query: 545 --------AGY-P--VKMLKTQYRMHPEVRSFPSREFYDEALE--DGS--DVEDYTTRDW 589
GY P V L YR H + P+ FYD L+ +GS DV ++ W
Sbjct: 473 NALYAKSDEGYNPQFVTKLLWNYRSHKAILKVPNELFYDSELKAYEGSEPDVRNFYCT-W 531
Query: 590 HEYRCFG-PFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLI 634
E G P F + G++ + A S S+ N E++ V+ KL+
Sbjct: 532 EELPNRGVPIIFHGVC-GEDEREAKSPSFFNTAEIEVVVQYLQKLL 576
Score = 74 (31.1 bits), Expect = 9.4e-12, Sum P(2) = 9.4e-12
Identities = 19/46 (41%), Positives = 26/46 (56%)
Query: 254 KENHNASQLEAI-H--EGLLRKAFVLIQGPPGTGKTQTILGLLSAI 296
K N Q +A+ H G+ R A LI GPPGTGKT T++ + +
Sbjct: 256 KVEANEEQCQAVKHIVTGMSRPAPYLIFGPPGTGKTVTLVEAIKQV 301
>UNIPROTKB|Q5ZKD7 [details] [associations]
symbol:MOV10 "Putative helicase MOV-10" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing
body" evidence=ISS] GO:GO:0005524 GO:GO:0003723 GO:GO:0004386
GO:GO:0000932 GO:GO:0035279 eggNOG:COG1112 InterPro:IPR026122
PANTHER:PTHR10887:SF17 HOGENOM:HOG000239755 OrthoDB:EOG4SXNC4
CTD:4343 EMBL:AJ720147 IPI:IPI00594294 RefSeq:NP_001012861.1
UniGene:Gga.1182 ProteinModelPortal:Q5ZKD7 STRING:Q5ZKD7
PRIDE:Q5ZKD7 GeneID:419872 KEGG:gga:419872 InParanoid:Q5ZKD7
NextBio:20822865 Uniprot:Q5ZKD7
Length = 967
Score = 172 (65.6 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 57/188 (30%), Positives = 98/188 (52%)
Query: 577 DGS--DVED-YTTRDWHEYRCFG-PFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHK 632
+GS DV + Y T W E G P F + G++ + A S S+ N E++ V+ K
Sbjct: 750 EGSEPDVRNFYCT--WEELPNRGVPIIFHGVC-GEDEREAKSPSFFNTAEIEVVVQYLQK 806
Query: 633 LISMY-----PQLKSSSQLAIISPYRHQVKQFQERF--KETF--GVESQKVVDITTVDGC 683
L+ P + S ++ IISPYR QV++ + K+ + + + +V+
Sbjct: 807 LLQSQGRRGCPTI-SPKEIGIISPYRKQVEKIRLAITSKDPVLRALPDIGQLKVGSVEEF 865
Query: 684 QGREKDVAIFSCVRASDKK-------SIGFLADYRRMNVGITRAKSSILVVGCASTLRED 736
QG+E+ V + S VR+ + +GFL + +R+NV +TRAK+ ++VVG A+ L +D
Sbjct: 866 QGQERRVILISTVRSCSEYLQLDQTFRLGFLKNPKRLNVALTRAKALLIVVGNAAVLSKD 925
Query: 737 KHWNNLVK 744
HW+ ++
Sbjct: 926 PHWHRFLR 933
Score = 164 (62.8 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 90/286 (31%), Positives = 125/286 (43%)
Query: 379 CAPSNSALDEIVLRLLNTGIRDENIRSYTPK-IVRIGLKAHHSVNSVAIDHLVEQKRDDS 437
CAPSNSA D + RLL NI P+ I RI + + + V D DDS
Sbjct: 545 CAPSNSAADLLCQRLLT------NI---APRYIYRI-MASSANYKDVPADVRPCCNWDDS 594
Query: 438 AADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHG-FDVVIIDEAAQAV 496
+K ++K +L I+ +TL +G + + G F V IDE AV
Sbjct: 595 --EKCYVYPSKK--------LLKPYRILITTLVTAGRLVSANFPPGYFSHVFIDECGHAV 644
Query: 497 EPATLVPLA---------TGCK--QVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQR- 544
EP ++V +A T Q+ L GDP QL SP+A G GTSL +RL
Sbjct: 645 EPESVVAIAGLLTTMDPDTNPNGGQLVLAGDPQQLGPVPRSPLAAQHGLGTSLLERLMLH 704
Query: 545 --------AGY-P--VKMLKTQYRMHPEVRSFPSREFYDEALE--DGS--DVEDYTTRDW 589
GY P V L YR H + P+ FYD L+ +GS DV ++ W
Sbjct: 705 NALYAKSDEGYNPQFVTKLLWNYRSHKAILKVPNELFYDSELKAYEGSEPDVRNFYCT-W 763
Query: 590 HEYRCFG-PFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLI 634
E G P F + G++ + A S S+ N E++ V+ KL+
Sbjct: 764 EELPNRGVPIIFHGVC-GEDEREAKSPSFFNTAEIEVVVQYLQKLL 808
Score = 74 (31.1 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 19/46 (41%), Positives = 26/46 (56%)
Query: 254 KENHNASQLEAI-H--EGLLRKAFVLIQGPPGTGKTQTILGLLSAI 296
K N Q +A+ H G+ R A LI GPPGTGKT T++ + +
Sbjct: 488 KVEANEEQCQAVKHIVTGMSRPAPYLIFGPPGTGKTVTLVEAIKQV 533
>ZFIN|ZDB-GENE-040426-1189 [details] [associations]
symbol:aqr "aquarius homolog (mouse)" species:7955
"Danio rerio" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IEA] [GO:0097157 "pre-mRNA intronic binding" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR024860
InterPro:IPR026300 PIRSF:PIRSF038901 ZFIN:ZDB-GENE-040426-1189
GO:GO:0005681 GO:GO:0000398 CTD:9716 HOGENOM:HOG000170551
HOVERGEN:HBG080430 KO:K12874 GO:GO:0097157 PANTHER:PTHR10887:SF5
EMBL:BC160661 IPI:IPI00861759 RefSeq:NP_956758.2 UniGene:Dr.17308
ProteinModelPortal:B1H1M2 DNASU:393436 GeneID:393436
KEGG:dre:393436 eggNOG:NOG272077 NextBio:20814473
ArrayExpress:B1H1M2 Uniprot:B1H1M2
Length = 1525
Score = 159 (61.0 bits), Expect = 8.2e-11, Sum P(2) = 8.2e-11
Identities = 77/301 (25%), Positives = 140/301 (46%)
Query: 448 RKDRDSIRSAILNEAVIVCSTLSFSGSAL--LSKLNHGFDVVIIDEAAQAVEPATLVPLA 505
R D + ++ EA I+ T + + L +L +D ++++EAAQ +E T +PL
Sbjct: 1017 RSGLDRSKYLLVKEAKIIAMTCTHAALKRHDLVELGFKYDNILMEEAAQILEIETFIPLL 1076
Query: 506 --------TGCKQVFLVGDPVQLPATVISPVA--EHLGYGTSLFKRLQRAGYPVKMLKTQ 555
+ K+ ++GD QLP VI +A ++ SLF R R G P L Q
Sbjct: 1077 LQNPEDGYSRLKRWIMIGDHHQLPP-VIKNMAFQKYSNMEQSLFTRFVRLGVPTVDLDAQ 1135
Query: 556 YRMHPEVRSFPSREFYDEALEDGSDVE---DYTTRDWHEYRCFGPFSFFDIHEGKESQPA 612
R + + + + + L + V+ ++ T + F + D + ES+P
Sbjct: 1136 GRARASLCNLYNWRY--KQLGNLPHVQLQPEFRTPNPGFTFDFQLINVEDFNGVGESEP- 1192
Query: 613 GSGSWINIDEVDF--VLLLFHKLISMYPQLKSSSQLAIISPY---RHQVKQF--QERFKE 665
+ N+ E ++ L ++ +L+ YP + +++I++ Y +H ++ Q
Sbjct: 1193 NPYFYQNLAEAEYSVALYMYMRLLG-YP----AERISILTTYNGQKHLIRDVIHQRCASN 1247
Query: 666 TFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSIL 725
+F + KV TTVD QG++ D I S VR K++G L D RR+ V ++RA+ +
Sbjct: 1248 SFFGQPSKV---TTVDRFQGQQNDYIILSLVRT---KAVGHLRDVRRLVVAMSRARLGLY 1301
Query: 726 V 726
+
Sbjct: 1302 I 1302
Score = 86 (35.3 bits), Expect = 8.2e-11, Sum P(2) = 8.2e-11
Identities = 19/59 (32%), Positives = 32/59 (54%)
Query: 260 SQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPAR-----VHSKGGLREI 313
+Q+EAI G+ + ++ GPPGTGKT + ++S + H P + HS L ++
Sbjct: 804 TQIEAIRAGM-QPGLTMVVGPPGTGKTNVAVQIISNLYHNFPEQRTLIVTHSNQALNQL 861
Score = 46 (21.3 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 249 LHEYIKENHNASQLEAIHE 267
LH+Y+ N N +LE+ +E
Sbjct: 462 LHDYLLRNFNLFRLESTYE 480
>UNIPROTKB|F1NPB8 [details] [associations]
symbol:AQR "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
[GO:0097157 "pre-mRNA intronic binding" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR024860
InterPro:IPR026300 PIRSF:PIRSF038901 GO:GO:0000398 OMA:RTKAVGH
GO:GO:0071013 GO:GO:0097157 PANTHER:PTHR10887:SF5
GeneTree:ENSGT00700000104467 EMBL:AADN02003289 EMBL:AADN02003288
IPI:IPI00597734 Ensembl:ENSGALT00000015995 Uniprot:F1NPB8
Length = 1416
Score = 158 (60.7 bits), Expect = 8.9e-11, Sum P(2) = 8.9e-11
Identities = 71/296 (23%), Positives = 135/296 (45%)
Query: 448 RKDRDSIRSAILNEAVIVCSTLSFSGSAL--LSKLNHGFDVVIIDEAAQAVEPATLVPLA 505
R D + ++ EA I+ T + + L +L +D ++++E+AQ +E T +PL
Sbjct: 1027 RSGLDRSKYLLVKEAKIIAMTCTHAALKRHDLVELGFKYDNILMEESAQILEIETFIPLL 1086
Query: 506 --------TGCKQVFLVGDPVQLPATVISPVA--EHLGYGTSLFKRLQRAGYPVKMLKTQ 555
+ K+ ++GD QLP VI +A ++ SLF R R G P L Q
Sbjct: 1087 LQNPQDGFSRLKRWIMIGDHHQLPP-VIKNMAFQKYSNMEQSLFTRFVRVGVPTVDLDAQ 1145
Query: 556 YRMHPEVRSFPSREFYDEA-LEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGS 614
R + + + + + L + ++ T + F + D + ES+P
Sbjct: 1146 GRARASLCNLYNWRYKNLGNLPHVQLMPEFRTANAGFLYDFQLINVEDFNGVGESEP-NP 1204
Query: 615 GSWINIDEVDFVLLLFHKLISM-YPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQ- 672
+ N+ E ++V+ +F + + YP + +++I++ Y Q ++ + G
Sbjct: 1205 YFYQNLGEAEYVVAVFMYMCLLGYP----ADRISILTTYNGQKHLIRDVINQRCGNNPLI 1260
Query: 673 -KVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLA-DYRRMNVGITRAKSSILV 726
+ +TTVD QG++ D + S VR K++G L D RR+ V ++RA+ + +
Sbjct: 1261 GRPNKVTTVDRFQGQQNDYILLSLVRT---KAVGHLRRDVRRLVVAMSRARLGLYI 1313
Score = 86 (35.3 bits), Expect = 8.9e-11, Sum P(2) = 8.9e-11
Identities = 19/59 (32%), Positives = 32/59 (54%)
Query: 260 SQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPAR-----VHSKGGLREI 313
+Q+EAI G+ + ++ GPPGTGKT + ++S + H P + HS L ++
Sbjct: 814 TQIEAIRAGM-QPGLTMVVGPPGTGKTDVAVQIISNLYHNFPEQRTLIVTHSNQALNQL 871
Score = 46 (21.3 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 249 LHEYIKENHNASQLEAIHE 267
LH+Y+ N N +LE+ +E
Sbjct: 470 LHDYLLRNFNLFRLESTYE 488
>TAIR|locus:2064158 [details] [associations]
symbol:EMB2765 "EMBRYO DEFECTIVE 2765" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR024860 InterPro:IPR026300 PIRSF:PIRSF038901
GO:GO:0005886 GO:GO:0009507 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0005681 GO:GO:0000398 eggNOG:COG1112 HOGENOM:HOG000170551
KO:K12874 OMA:RTKAVGH GO:GO:0097157 PANTHER:PTHR10887:SF5
EMBL:AY099864 IPI:IPI00544394 RefSeq:NP_850297.1 UniGene:At.23967
ProteinModelPortal:Q8L5Y4 SMR:Q8L5Y4 STRING:Q8L5Y4 PaxDb:Q8L5Y4
PRIDE:Q8L5Y4 EnsemblPlants:AT2G38770.1 GeneID:818459
KEGG:ath:AT2G38770 TAIR:At2g38770 InParanoid:Q8L5Y4
PhylomeDB:Q8L5Y4 ProtClustDB:CLSN2680117 Genevestigator:Q8L5Y4
Uniprot:Q8L5Y4
Length = 1509
Score = 153 (58.9 bits), Expect = 4.4e-10, Sum P(2) = 4.4e-10
Identities = 78/308 (25%), Positives = 136/308 (44%)
Query: 452 DSIRSAILNEAVIVCSTLSFSGSALLSKLNHGF--DVVIIDEAAQAVEPATLVPLAT--- 506
D + +A IV T + + L GF D ++++E+AQ +E T +P+
Sbjct: 1083 DRANYLMTKQAKIVAMTCTHAALKRRDFLQLGFKYDNLLMEESAQILEIETFIPMLLQRQ 1142
Query: 507 --G---CKQVFLVGDPVQLPATVISPVAEHLGY-GTSLFKRLQRAGYPVKMLKTQYRMHP 560
G K+ L+GD QLP V + + + SLF R R G P L Q R P
Sbjct: 1143 EDGHARLKRCILIGDHHQLPPVVKNMAFQKYSHMDQSLFTRFVRLGIPYIELNAQGRARP 1202
Query: 561 EVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDI--HEGK-ESQPAGSGSW 617
+ + + D L D S V++ + ++ +EG+ ES P+ W
Sbjct: 1203 SLAKLYNWRYRD--LGDLSIVKEAPIFQRANAGFSYEYQLVNVPDYEGRGESTPS---PW 1257
Query: 618 I--NIDEVDFVL--LLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKET------F 667
N E ++++ ++ +L+ YP +++++I++ Y Q ++
Sbjct: 1258 FYQNQGEAEYIVSVYIYMRLLG-YP----ANKISILTTYNGQKLLIRDVINRRCVPYPFI 1312
Query: 668 GVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVV 727
G S+ +TTVD QG++ D + S VR + +G L D RR+ V ++RA+ + V
Sbjct: 1313 GPPSK----VTTVDKFQGQQNDFILLSLVRT---RFVGHLRDVRRLVVAMSRARLGLYVF 1365
Query: 728 GCASTLRE 735
C +L E
Sbjct: 1366 -CRRSLFE 1372
Score = 85 (35.0 bits), Expect = 4.4e-10, Sum P(2) = 4.4e-10
Identities = 19/59 (32%), Positives = 33/59 (55%)
Query: 260 SQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPAR-----VHSKGGLREI 313
+Q+ AI G+ + ++ GPPGTGKT T + +L+ + H P++ HS L ++
Sbjct: 869 TQVGAIISGI-QPGLTMVVGPPGTGKTDTAVQILNVLYHNCPSQRTLIITHSNQALNDL 926
Score = 46 (21.3 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 249 LHEYIKENHNASQLEAIHE 267
LH+Y+ N N +LE+ +E
Sbjct: 507 LHDYLLRNFNLFRLESTYE 525
>UNIPROTKB|Q886X0 [details] [associations]
symbol:PSPTO_1455 "Uncharacterized protein" species:223283
"Pseudomonas syringae pv. tomato str. DC3000" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:AE016853 GenomeReviews:AE016853_GR eggNOG:COG1112
InterPro:IPR024402 Pfam:PF10881 RefSeq:NP_791281.1
ProteinModelPortal:Q886X0 GeneID:1183092 KEGG:pst:PSPTO_1455
PATRIC:19994154 HOGENOM:HOG000273296 OMA:HYRCHPK
ProtClustDB:CLSK879830 BioCyc:PSYR223283:GJIX-1482-MONOMER
Uniprot:Q886X0
Length = 758
Score = 101 (40.6 bits), Expect = 7.0e-10, Sum P(3) = 7.0e-10
Identities = 21/40 (52%), Positives = 29/40 (72%)
Query: 258 NASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAIL 297
N SQL+A+ + + LI+GPPGTGKTQTIL +++ IL
Sbjct: 31 NESQLKAVEQAFSSQ-ISLIEGPPGTGKTQTILNIIANIL 69
Score = 96 (38.9 bits), Expect = 7.0e-10, Sum P(3) = 7.0e-10
Identities = 34/102 (33%), Positives = 46/102 (45%)
Query: 485 DVVIIDEAAQAVEPATLVP--LATGC-KQVFLVGDPVQLP--ATVISPVAEHLGYGTSLF 539
D VIIDEA+Q +VP LA C K + +VGD QL + A Y +
Sbjct: 334 DYVIIDEASQQ----DIVPGVLALSCAKNLIIVGDRKQLAHIPEKLGLEAPAPWYDCETY 389
Query: 540 KRLQRA------GYPVKMLKTQYRMHPEVRSFPSREFYDEAL 575
L P+ +LK YR HP + F +++FYD L
Sbjct: 390 SLLDSCVGVFGDSIPMTLLKEHYRCHPRIIQFCNQQFYDNQL 431
Score = 79 (32.9 bits), Expect = 7.0e-10, Sum P(3) = 7.0e-10
Identities = 22/53 (41%), Positives = 30/53 (56%)
Query: 679 TVDGCQGREKDVAIFSCVRASDK--KSIGFLADYRRMNVGITRAKSSI-LVVG 728
TV QGRE D +FS V K + + F+ D R +NV ++RAK+ LV G
Sbjct: 509 TVHKFQGRECDEIVFSTVLDKHKSPERLSFVDDARMVNVAVSRAKNRFTLVTG 561
>UNIPROTKB|Q81NI5 [details] [associations]
symbol:BAS2982 "Conserved domain protein" species:1392
"Bacillus anthracis" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR RefSeq:NP_845517.1 RefSeq:YP_019848.1
RefSeq:YP_029239.1 ProteinModelPortal:Q81NI5 IntAct:Q81NI5
DNASU:1087476 EnsemblBacteria:EBBACT00000012886
EnsemblBacteria:EBBACT00000015522 EnsemblBacteria:EBBACT00000022854
GeneID:1087476 GeneID:2817117 GeneID:2850799 KEGG:ban:BA_3207
KEGG:bar:GBAA_3207 KEGG:bat:BAS2982 HOGENOM:HOG000093512
OMA:EVSMAYV ProtClustDB:CLSK916959
BioCyc:BANT260799:GJAJ-3044-MONOMER
BioCyc:BANT261594:GJ7F-3148-MONOMER Uniprot:Q81NI5
Length = 759
Score = 175 (66.7 bits), Expect = 7.2e-10, Sum P(2) = 7.2e-10
Identities = 81/316 (25%), Positives = 150/316 (47%)
Query: 437 SAADKQK----HGATRKDRDSIRSA---ILNEAVIVCSTLSFSGSALLSKL-NHGFDVVI 488
++ADK++ RK R I+ + A ++ +TLS A+ S + FD+V+
Sbjct: 282 TSADKKRMQEIESDLRKQRAKIKEVEKEYIENAKVIGATLS--KCAIDSLIYERTFDLVV 339
Query: 489 IDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISP---VAEHLG----YGTSLFKR 541
+DE + A P + + G K++ + GD +QLP ++ V + LG Y + +
Sbjct: 340 VDEVSMAFVPQIALAASLG-KRIVVCGDFLQLPPIAMANHELVRKWLGEDMFYHAGIVES 398
Query: 542 LQRA-GYP-VKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFS 599
+ ++ +P + ML+ Q RMH ++ F + Y + D V + ++ + + F +
Sbjct: 399 VNKSEAHPNLFMLQEQRRMHADISKFTNSFIYKNRVYDHPSVSE--RKELAQLQPFANEA 456
Query: 600 --FFDIHE-GKES-QPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQ 655
FD + G S + A SGS NI + ++ + LI + ++S + I++PYR Q
Sbjct: 457 SVLFDTSQMGAFSLKDAASGSRFNI--MSGLVAMQMMLIGLLDGVQS---IGIVTPYRAQ 511
Query: 656 VKQFQERFKETFG-VESQKV-VDITTVDGCQGREKDVAIFSCVRASDKKSIGFL----AD 709
+ +E + Q + V TV QG E+D+ IF V + ++ G L +
Sbjct: 512 SRFLSTCIREMLQRTKYQNIPVLAATVHKFQGSERDMMIFDTVDSYPQERPGVLFFDHKN 571
Query: 710 YRRMNVGITRAKSSIL 725
+R +NV +TRA+ +
Sbjct: 572 HRLVNVAVTRARGKFI 587
Score = 53 (23.7 bits), Expect = 7.2e-10, Sum P(2) = 7.2e-10
Identities = 9/19 (47%), Positives = 14/19 (73%)
Query: 277 IQGPPGTGKTQTILGLLSA 295
+ GPPGTGK+ + ++SA
Sbjct: 170 VWGPPGTGKSYNLSRIISA 188
>TIGR_CMR|BA_3207 [details] [associations]
symbol:BA_3207 "conserved domain protein" species:198094
"Bacillus anthracis str. Ames" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR
RefSeq:NP_845517.1 RefSeq:YP_019848.1 RefSeq:YP_029239.1
ProteinModelPortal:Q81NI5 IntAct:Q81NI5 DNASU:1087476
EnsemblBacteria:EBBACT00000012886 EnsemblBacteria:EBBACT00000015522
EnsemblBacteria:EBBACT00000022854 GeneID:1087476 GeneID:2817117
GeneID:2850799 KEGG:ban:BA_3207 KEGG:bar:GBAA_3207 KEGG:bat:BAS2982
HOGENOM:HOG000093512 OMA:EVSMAYV ProtClustDB:CLSK916959
BioCyc:BANT260799:GJAJ-3044-MONOMER
BioCyc:BANT261594:GJ7F-3148-MONOMER Uniprot:Q81NI5
Length = 759
Score = 175 (66.7 bits), Expect = 7.2e-10, Sum P(2) = 7.2e-10
Identities = 81/316 (25%), Positives = 150/316 (47%)
Query: 437 SAADKQK----HGATRKDRDSIRSA---ILNEAVIVCSTLSFSGSALLSKL-NHGFDVVI 488
++ADK++ RK R I+ + A ++ +TLS A+ S + FD+V+
Sbjct: 282 TSADKKRMQEIESDLRKQRAKIKEVEKEYIENAKVIGATLS--KCAIDSLIYERTFDLVV 339
Query: 489 IDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISP---VAEHLG----YGTSLFKR 541
+DE + A P + + G K++ + GD +QLP ++ V + LG Y + +
Sbjct: 340 VDEVSMAFVPQIALAASLG-KRIVVCGDFLQLPPIAMANHELVRKWLGEDMFYHAGIVES 398
Query: 542 LQRA-GYP-VKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFS 599
+ ++ +P + ML+ Q RMH ++ F + Y + D V + ++ + + F +
Sbjct: 399 VNKSEAHPNLFMLQEQRRMHADISKFTNSFIYKNRVYDHPSVSE--RKELAQLQPFANEA 456
Query: 600 --FFDIHE-GKES-QPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQ 655
FD + G S + A SGS NI + ++ + LI + ++S + I++PYR Q
Sbjct: 457 SVLFDTSQMGAFSLKDAASGSRFNI--MSGLVAMQMMLIGLLDGVQS---IGIVTPYRAQ 511
Query: 656 VKQFQERFKETFG-VESQKV-VDITTVDGCQGREKDVAIFSCVRASDKKSIGFL----AD 709
+ +E + Q + V TV QG E+D+ IF V + ++ G L +
Sbjct: 512 SRFLSTCIREMLQRTKYQNIPVLAATVHKFQGSERDMMIFDTVDSYPQERPGVLFFDHKN 571
Query: 710 YRRMNVGITRAKSSIL 725
+R +NV +TRA+ +
Sbjct: 572 HRLVNVAVTRARGKFI 587
Score = 53 (23.7 bits), Expect = 7.2e-10, Sum P(2) = 7.2e-10
Identities = 9/19 (47%), Positives = 14/19 (73%)
Query: 277 IQGPPGTGKTQTILGLLSA 295
+ GPPGTGK+ + ++SA
Sbjct: 170 VWGPPGTGKSYNLSRIISA 188
>FB|FBgn0036451 [details] [associations]
symbol:CG9425 species:7227 "Drosophila melanogaster"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR003593
InterPro:IPR007087 InterPro:IPR011990 InterPro:IPR015880
Pfam:PF00642 PROSITE:PS00028 SMART:SM00355 SMART:SM00382
GO:GO:0005524 EMBL:AE014296 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 Gene3D:1.25.40.10 GO:GO:0017111 eggNOG:COG1112
GeneTree:ENSGT00550000074391 RefSeq:NP_996084.1 UniGene:Dm.11708
ProteinModelPortal:Q7KUL0 SMR:Q7KUL0 STRING:Q7KUL0 PaxDb:Q7KUL0
PRIDE:Q7KUL0 EnsemblMetazoa:FBtr0075693 EnsemblMetazoa:FBtr0333074
EnsemblMetazoa:FBtr0333075 GeneID:39613 KEGG:dme:Dmel_CG9425
UCSC:CG9425-RB FlyBase:FBgn0036451 InParanoid:Q7KUL0 OMA:WINELSG
OrthoDB:EOG46HDRH PhylomeDB:Q7KUL0 ChiTaRS:CG9425 GenomeRNAi:39613
NextBio:814517 ArrayExpress:Q7KUL0 Bgee:Q7KUL0 Uniprot:Q7KUL0
Length = 2103
Score = 175 (66.7 bits), Expect = 3.9e-09, Sum P(3) = 3.9e-09
Identities = 100/402 (24%), Positives = 179/402 (44%)
Query: 379 CAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQKRDDSA 438
C SNSA D + L+ I +E ++ TP +R+ +H S ++ +V++
Sbjct: 860 CTHSNSAADLYIKEYLHPWI-EEGLKEATP--LRV---YYHKRWSATVNGVVQKY---CI 910
Query: 439 ADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEP 498
D G R ++ + + V+V ++S A L F + +DEAAQA+E
Sbjct: 911 TD----GVGNFLRPTVEDIMRHRIVVVTLSISME-LATLGLPKGLFTHIFLDEAAQAMEC 965
Query: 499 ATLVPLATG--CKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQR---AGYPVKMLK 553
++PLA ++ L GD +Q+ + S A+ SL +RL + +P K+L
Sbjct: 966 EAIMPLALANDSTRIVLAGDHMQMSPELFSAFAKERKLHISLLERLYDHYPSNFPCKILL 1025
Query: 554 TQ-YRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPA 612
+ YR H + F S FY++ L S + R ++ F D+ + K S
Sbjct: 1026 CENYRAHEAIIRFTSELFYEQKLV-ASGKQPRHDR-FYPLTFFTTRGE-DVQD-KNSTAF 1081
Query: 613 GSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQE--RFKETFGVE 670
+ + + + V+ V L + S + +L +S + I++PY QV + + R + G+
Sbjct: 1082 YNNAEV-YEVVERVSELRKRWPSAWGKLNDTS-IGIMTPYSDQVFRIRSELRKRRMGGIS 1139
Query: 671 SQKVVDI----------TTVDG---C--QGREKDVAIFSCVRASDKKSIGFLADYRRMNV 715
++V+++ +TV C QG A + + +D GFL++ + +N
Sbjct: 1140 VERVLNVQGKQFRAVFLSTVRTRRTCMPQGSAPGSASTTSIGDADA-DYGFLSNSKLLNT 1198
Query: 716 GITRAKSSILVVGCASTL----REDKHWNNLVKSAEKQDCLF 753
ITRA+S + VVG L R K W ++ ++ LF
Sbjct: 1199 AITRAQSLVAVVGDPVALCSIGRCRKVWERFIEICDEHKSLF 1240
Score = 59 (25.8 bits), Expect = 3.9e-09, Sum P(3) = 3.9e-09
Identities = 17/51 (33%), Positives = 28/51 (54%)
Query: 258 NASQLEAIHE---GL-LRKAFVLIQGPPGTGKTQTILGLLSAILHATPARV 304
NA Q EA++ L ++ +L+ GP GTGKT T+ + +L A++
Sbjct: 807 NAKQREAVNAITTALSIKLPPILLIGPFGTGKTYTLAQAIKQLLTQPEAKI 857
Score = 46 (21.3 bits), Expect = 3.9e-09, Sum P(3) = 3.9e-09
Identities = 10/45 (22%), Positives = 22/45 (48%)
Query: 53 EVKDTYKDVDDYLATFEPLLFEEVKAQIIQKKDEEEVQEWKLRLV 97
E+ T++ + EPLL + ++ D E+++E K ++
Sbjct: 505 EIYGTFRQAICFDVGQEPLLVRHLCVDVLPVNDAEKIEEIKRDII 549
Score = 43 (20.2 bits), Expect = 7.8e-09, Sum P(3) = 7.8e-09
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 78 AQIIQKKDEEEVQEWKLR 95
AQ ++ ++E+ EWK R
Sbjct: 345 AQCVEAHGQDELNEWKER 362
>MGI|MGI:1925705 [details] [associations]
symbol:Helz "helicase with zinc finger domain" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 MGI:MGI:1925705
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 GO:GO:0004386 eggNOG:COG1112 CTD:9931
HOGENOM:HOG000231202 HOVERGEN:HBG031603 EMBL:AB093209 EMBL:AL645947
EMBL:BC021818 EMBL:BC076626 EMBL:BC130582 EMBL:AK033094
IPI:IPI00453654 IPI:IPI00649664 IPI:IPI00915056 RefSeq:NP_938040.1
UniGene:Mm.272047 UniGene:Mm.394603 UniGene:Mm.490425
ProteinModelPortal:Q6DFV5 SMR:Q6DFV5 IntAct:Q6DFV5 STRING:Q6DFV5
PhosphoSite:Q6DFV5 PaxDb:Q6DFV5 PRIDE:Q6DFV5
Ensembl:ENSMUST00000075012 Ensembl:ENSMUST00000106746 GeneID:78455
KEGG:mmu:78455 UCSC:uc007mav.1 GeneTree:ENSGT00550000074391
InParanoid:Q8BZZ6 NextBio:348914 Bgee:Q6DFV5 Genevestigator:Q6DFV5
Uniprot:Q6DFV5
Length = 1964
Score = 173 (66.0 bits), Expect = 6.4e-09, Sum P(3) = 6.4e-09
Identities = 73/251 (29%), Positives = 116/251 (46%)
Query: 458 ILNEAVIVCSTLSFSGSALLSKLNHGFDV-VIIDEAAQAVEPATLVPLATGCK--QVFLV 514
IL V+V TLS S L GF V++DEAAQA+E T++PLA K ++ L
Sbjct: 762 ILKHRVVVV-TLSTSQYLCQLDLEPGFFTHVLLDEAAQAMECETIMPLALATKNTRIVLA 820
Query: 515 GDPVQLPATVISPVAEHLGYGTSLFKRLQR---AGYPVKMLKTQ-YRMHPEVRSFPSREF 570
GD +QL V S A SL RL A +P ++L + YR H + ++ S F
Sbjct: 821 GDHMQLSPFVYSEFARERNLHVSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELF 880
Query: 571 YDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
Y+ L + +D++ P +FF G++ Q S ++ N EV V+
Sbjct: 881 YEGKLMASGKQPAH--KDFY------PLTFFTAR-GEDVQEKNSTAFYNNAEVFEVVERV 931
Query: 631 HKLISMYP----QLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGR 686
+L +P +L S + +++PY QV + + ++ + V++ V QG+
Sbjct: 932 EELRRKWPVAWGKLDDGS-IGVVTPYADQVFRIRAELRK----KRLSDVNVERVLNVQGK 986
Query: 687 EKDVAIFSCVR 697
+ V S VR
Sbjct: 987 QFRVLFLSTVR 997
Score = 56 (24.8 bits), Expect = 6.4e-09, Sum P(3) = 6.4e-09
Identities = 14/30 (46%), Positives = 16/30 (53%)
Query: 275 VLIQGPPGTGKTQTILGLLSAILHATPARV 304
VLI GP GTGKT T+ IL R+
Sbjct: 664 VLIIGPYGTGKTFTLAQAAKHILQQQETRI 693
Score = 48 (22.0 bits), Expect = 6.4e-09, Sum P(3) = 6.4e-09
Identities = 16/75 (21%), Positives = 30/75 (40%)
Query: 53 EVKDTYKDVDDYLATFEPLLFEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVT 112
E+ T++ + EP+L + V +D E + K +LV D V
Sbjct: 356 EIFGTFRQTIVFDFGLEPVLMQRVMIDAASTEDLEYLMHAKRQLVTTAKRWDSSSKTIVD 415
Query: 113 YEADEVESISPNDLL 127
+E +E + + L+
Sbjct: 416 FEPNETTDLEKSLLI 430
Score = 37 (18.1 bits), Expect = 8.1e-08, Sum P(3) = 8.1e-08
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 78 AQIIQKKDEEEVQEWKLR 95
AQ +EE+ EW+ R
Sbjct: 197 AQCTSAHSQEELAEWQKR 214
>UNIPROTKB|E2R8C1 [details] [associations]
symbol:HELZ "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0008270
GO:GO:0003676 CTD:9931 OMA:YRVALLY GeneTree:ENSGT00550000074391
EMBL:AAEX03006372 EMBL:AAEX03006373 EMBL:AAEX03006374
RefSeq:XP_862371.2 Ensembl:ENSCAFT00000018141 GeneID:490907
KEGG:cfa:490907 Uniprot:E2R8C1
Length = 1944
Score = 169 (64.5 bits), Expect = 1.3e-08, Sum P(3) = 1.3e-08
Identities = 71/251 (28%), Positives = 116/251 (46%)
Query: 458 ILNEAVIVCSTLSFSGSALLSKLNHGFDV-VIIDEAAQAVEPATLVPLATGCK--QVFLV 514
IL V+V TL+ S L GF +++DEAAQA+E T++PLA K ++ L
Sbjct: 762 ILKHRVVVV-TLNTSQYLCQLDLEPGFFTHILLDEAAQAMECETIMPLALATKNTRIVLA 820
Query: 515 GDPVQLPATVISPVAEHLGYGTSLFKRLQR---AGYPVKMLKTQ-YRMHPEVRSFPSREF 570
GD +QL V S A SL RL A +P ++L + YR H + ++ S F
Sbjct: 821 GDHMQLSPFVYSEFARERNLHVSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELF 880
Query: 571 YDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
Y+ L + +D++ P +FF G++ Q S ++ N EV V+
Sbjct: 881 YEGKLMASGKQPAH--KDFY------PLTFFTAR-GEDVQEKNSTAFYNNAEVFEVVERV 931
Query: 631 HKLISMYP----QLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGR 686
+L +P +L S + +++PY QV + + ++ + V++ V QG+
Sbjct: 932 EELRRKWPVAWGKLDDGS-IGVVTPYADQVFRIRAELRK----KRLSDVNVERVLNVQGK 986
Query: 687 EKDVAIFSCVR 697
+ V S VR
Sbjct: 987 QFRVLFLSTVR 997
Score = 58 (25.5 bits), Expect = 1.3e-08, Sum P(3) = 1.3e-08
Identities = 14/30 (46%), Positives = 17/30 (56%)
Query: 275 VLIQGPPGTGKTQTILGLLSAILHATPARV 304
VLI GP GTGKT T+ + IL R+
Sbjct: 664 VLIIGPYGTGKTFTLAQAVKHILQQQETRI 693
Score = 47 (21.6 bits), Expect = 1.3e-08, Sum P(3) = 1.3e-08
Identities = 15/75 (20%), Positives = 30/75 (40%)
Query: 53 EVKDTYKDVDDYLATFEPLLFEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVT 112
E+ T++ + EP+L + V +D E + K +LV D +
Sbjct: 356 EIFGTFRQTIVFDFGLEPVLMQRVMIDAASTEDLEYLMHAKQQLVTTAKRWDSSSKTIID 415
Query: 113 YEADEVESISPNDLL 127
+E +E + + L+
Sbjct: 416 FEPNETTDLEKSLLI 430
Score = 37 (18.1 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 78 AQIIQKKDEEEVQEWKLR 95
AQ +EE+ EW+ R
Sbjct: 197 AQCTSAHSQEELAEWQKR 214
>UNIPROTKB|F1RSM3 [details] [associations]
symbol:HELZ "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0008270
GO:GO:0003676 CTD:9931 OMA:YRVALLY GeneTree:ENSGT00550000074391
EMBL:CU466377 EMBL:CU639426 EMBL:CU929837 RefSeq:XP_003131321.1
UniGene:Ssc.13421 Ensembl:ENSSSCT00000018802 GeneID:100524104
KEGG:ssc:100524104 Uniprot:F1RSM3
Length = 1944
Score = 169 (64.5 bits), Expect = 1.3e-08, Sum P(3) = 1.3e-08
Identities = 71/251 (28%), Positives = 116/251 (46%)
Query: 458 ILNEAVIVCSTLSFSGSALLSKLNHGFDV-VIIDEAAQAVEPATLVPLATGCK--QVFLV 514
IL V+V TL+ S L GF +++DEAAQA+E T++PLA K ++ L
Sbjct: 762 ILKHRVVVV-TLNTSQYLCQLDLEPGFFTHILLDEAAQAMECETIMPLALATKNTRIVLA 820
Query: 515 GDPVQLPATVISPVAEHLGYGTSLFKRLQR---AGYPVKMLKTQ-YRMHPEVRSFPSREF 570
GD +QL V S A SL RL A +P ++L + YR H + ++ S F
Sbjct: 821 GDHMQLSPFVYSEFARERNLHVSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELF 880
Query: 571 YDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
Y+ L + +D++ P +FF G++ Q S ++ N EV V+
Sbjct: 881 YEGKLMASGKQPAH--KDFY------PLTFFTAR-GEDVQEKNSTAFYNNAEVFEVVERV 931
Query: 631 HKLISMYP----QLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGR 686
+L +P +L S + +++PY QV + + ++ + V++ V QG+
Sbjct: 932 EELRRKWPVAWGKLDDGS-IGVVTPYADQVFRIRAELRK----KRLSDVNVERVLNVQGK 986
Query: 687 EKDVAIFSCVR 697
+ V S VR
Sbjct: 987 QFRVLFLSTVR 997
Score = 58 (25.5 bits), Expect = 1.3e-08, Sum P(3) = 1.3e-08
Identities = 14/30 (46%), Positives = 17/30 (56%)
Query: 275 VLIQGPPGTGKTQTILGLLSAILHATPARV 304
VLI GP GTGKT T+ + IL R+
Sbjct: 664 VLIIGPYGTGKTFTLAQAVKHILQQQETRI 693
Score = 47 (21.6 bits), Expect = 1.3e-08, Sum P(3) = 1.3e-08
Identities = 15/75 (20%), Positives = 30/75 (40%)
Query: 53 EVKDTYKDVDDYLATFEPLLFEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVT 112
E+ T++ + EP+L + V +D E + K +LV D +
Sbjct: 356 EIFGTFRQTIVFDFGLEPVLMQRVMIDAASTEDLEYLMHAKQQLVTTAKRWDSSSKTIID 415
Query: 113 YEADEVESISPNDLL 127
+E +E + + L+
Sbjct: 416 FEPNETTDLEKSLLI 430
Score = 37 (18.1 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 78 AQIIQKKDEEEVQEWKLR 95
AQ +EE+ EW+ R
Sbjct: 197 AQCTSAHSQEELAEWQKR 214
>UNIPROTKB|I6L9H4 [details] [associations]
symbol:HELZ "Probable helicase with zinc finger domain"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0008270 GO:GO:0003676 EMBL:AC005544 EMBL:AC007448
UniGene:Hs.370140 UniGene:Hs.569824 HGNC:HGNC:16878 ChiTaRS:HELZ
EMBL:BC094881 ProteinModelPortal:I6L9H4 Ensembl:ENST00000579953
Uniprot:I6L9H4
Length = 1163
Score = 165 (63.1 bits), Expect = 1.5e-08, Sum P(3) = 1.5e-08
Identities = 70/251 (27%), Positives = 116/251 (46%)
Query: 458 ILNEAVIVCSTLSFSGSALLSKLNHGFDV-VIIDEAAQAVEPATLVPLATGCK--QVFLV 514
IL V+V TL+ S L GF +++DEAAQA+E T++PLA + ++ L
Sbjct: 763 ILKHRVVVV-TLNTSQYLCQLDLEPGFFTHILLDEAAQAMECETIMPLALATQNTRIVLA 821
Query: 515 GDPVQLPATVISPVAEHLGYGTSLFKRLQR---AGYPVKMLKTQ-YRMHPEVRSFPSREF 570
GD +QL V S A SL RL A +P ++L + YR H + ++ S F
Sbjct: 822 GDHMQLSPFVYSEFARERNLHVSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELF 881
Query: 571 YDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
Y+ L + +D++ P +FF G++ Q S ++ N EV V+
Sbjct: 882 YEGKLMASGKQPAH--KDFY------PLTFFTAR-GEDVQEKNSTAFYNNAEVFEVVERV 932
Query: 631 HKLISMYP----QLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGR 686
+L +P +L S + +++PY QV + + ++ + V++ V QG+
Sbjct: 933 EELRRKWPVAWGKLDDGS-IGVVTPYADQVFRIRAELRK----KRLSDVNVERVLNVQGK 987
Query: 687 EKDVAIFSCVR 697
+ V S VR
Sbjct: 988 QFRVLFLSTVR 998
Score = 54 (24.1 bits), Expect = 1.5e-08, Sum P(3) = 1.5e-08
Identities = 20/51 (39%), Positives = 24/51 (47%)
Query: 251 EYIKENHNASQLEAIHEGLLRKAF----VLIQGPPGTGKTQTILGLLSAIL 297
E + NA Q EA+ A VLI GP GTGKT T+ + IL
Sbjct: 636 EQLDPRLNAKQKEAVLAITTPLAIQLPPVLIIGPYGTGKTFTLAQAVKHIL 686
Score = 47 (21.6 bits), Expect = 1.5e-08, Sum P(3) = 1.5e-08
Identities = 15/75 (20%), Positives = 30/75 (40%)
Query: 53 EVKDTYKDVDDYLATFEPLLFEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVT 112
E+ T++ + EP+L + V +D E + K +LV D +
Sbjct: 356 EIFGTFRQTIVFDFGLEPVLMQRVMIDAASTEDLEYLMHAKQQLVTTAKRWDSSSKTIID 415
Query: 113 YEADEVESISPNDLL 127
+E +E + + L+
Sbjct: 416 FEPNETTDLEKSLLI 430
Score = 37 (18.1 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 78 AQIIQKKDEEEVQEWKLR 95
AQ +EE+ EW+ R
Sbjct: 197 AQCTSAHSQEELAEWQKR 214
>UNIPROTKB|P42694 [details] [associations]
symbol:HELZ "Probable helicase with zinc finger domain"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 GO:GO:0004386 eggNOG:COG1112 HOVERGEN:HBG031603
OrthoDB:EOG4NP72K EMBL:D29677 EMBL:AC005544 EMBL:AC007448
IPI:IPI00000897 UniGene:Hs.370140 UniGene:Hs.569824
ProteinModelPortal:P42694 SMR:P42694 IntAct:P42694 STRING:P42694
PhosphoSite:P42694 DMDM:221222452 PaxDb:P42694 PRIDE:P42694
Ensembl:ENST00000358691 UCSC:uc002jfx.4 GeneCards:GC17M065066
HGNC:HGNC:16878 HPA:HPA028276 MIM:606699 neXtProt:NX_P42694
InParanoid:P42694 OMA:YRVALLY ChiTaRS:HELZ ArrayExpress:P42694
Bgee:P42694 CleanEx:HS_HELZ Genevestigator:P42694
GermOnline:ENSG00000198265 Uniprot:P42694
Length = 1942
Score = 165 (63.1 bits), Expect = 2.7e-08, Sum P(3) = 2.7e-08
Identities = 70/251 (27%), Positives = 116/251 (46%)
Query: 458 ILNEAVIVCSTLSFSGSALLSKLNHGFDV-VIIDEAAQAVEPATLVPLATGCK--QVFLV 514
IL V+V TL+ S L GF +++DEAAQA+E T++PLA + ++ L
Sbjct: 762 ILKHRVVVV-TLNTSQYLCQLDLEPGFFTHILLDEAAQAMECETIMPLALATQNTRIVLA 820
Query: 515 GDPVQLPATVISPVAEHLGYGTSLFKRLQR---AGYPVKMLKTQ-YRMHPEVRSFPSREF 570
GD +QL V S A SL RL A +P ++L + YR H + ++ S F
Sbjct: 821 GDHMQLSPFVYSEFARERNLHVSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELF 880
Query: 571 YDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
Y+ L + +D++ P +FF G++ Q S ++ N EV V+
Sbjct: 881 YEGKLMASGKQPAH--KDFY------PLTFFTAR-GEDVQEKNSTAFYNNAEVFEVVERV 931
Query: 631 HKLISMYP----QLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGR 686
+L +P +L S + +++PY QV + + ++ + V++ V QG+
Sbjct: 932 EELRRKWPVAWGKLDDGS-IGVVTPYADQVFRIRAELRK----KRLSDVNVERVLNVQGK 986
Query: 687 EKDVAIFSCVR 697
+ V S VR
Sbjct: 987 QFRVLFLSTVR 997
Score = 59 (25.8 bits), Expect = 2.7e-08, Sum P(3) = 2.7e-08
Identities = 21/58 (36%), Positives = 26/58 (44%)
Query: 251 EYIKENHNASQLEAIHEGLLRKAF----VLIQGPPGTGKTQTILGLLSAILHATPARV 304
E + NA Q EA+ A VLI GP GTGKT T+ + IL R+
Sbjct: 636 EQLDPRLNAKQKEAVLAITTPLAIQLPPVLIIGPYGTGKTFTLAQAVKHILQQQETRI 693
Score = 47 (21.6 bits), Expect = 2.7e-08, Sum P(3) = 2.7e-08
Identities = 15/75 (20%), Positives = 30/75 (40%)
Query: 53 EVKDTYKDVDDYLATFEPLLFEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVT 112
E+ T++ + EP+L + V +D E + K +LV D +
Sbjct: 356 EIFGTFRQTIVFDFGLEPVLMQRVMIDAASTEDLEYLMHAKQQLVTTAKRWDSSSKTIID 415
Query: 113 YEADEVESISPNDLL 127
+E +E + + L+
Sbjct: 416 FEPNETTDLEKSLLI 430
Score = 37 (18.1 bits), Expect = 2.7e-07, Sum P(3) = 2.7e-07
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 78 AQIIQKKDEEEVQEWKLR 95
AQ +EE+ EW+ R
Sbjct: 197 AQCTSAHSQEELAEWQKR 214
>ZFIN|ZDB-GENE-040426-2419 [details] [associations]
symbol:helz "helicase with zinc finger"
species:7955 "Danio rerio" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR011539 InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 ZFIN:ZDB-GENE-040426-2419 GO:GO:0005524 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 GO:GO:0003700 GO:GO:0003676
GO:GO:0004386 eggNOG:COG1112 EMBL:BC066461 IPI:IPI00500029
RefSeq:NP_998431.1 UniGene:Dr.35354 ProteinModelPortal:Q6NYU2
GeneID:406550 KEGG:dre:406550 CTD:9931 HOGENOM:HOG000231202
HOVERGEN:HBG031603 OrthoDB:EOG4NP72K NextBio:20818112
ArrayExpress:Q6NYU2 Uniprot:Q6NYU2
Length = 1860
Score = 174 (66.3 bits), Expect = 2.7e-08, Sum P(3) = 2.7e-08
Identities = 69/245 (28%), Positives = 113/245 (46%)
Query: 464 IVCSTLSFSGSALLSKLNHG-FDVVIIDEAAQAVEPATLVPLATGCK--QVFLVGDPVQL 520
+V TLS S L G F +++DEAAQA+E T++PLA K +V L GD +QL
Sbjct: 760 VVVVTLSTSQYLCQLDLEPGIFTHILLDEAAQAMECETIMPLALAVKSTRVVLAGDHMQL 819
Query: 521 PATVISPVAEHLGYGTSLFKRLQR---AGYPVKMLKTQ-YRMHPEVRSFPSREFYDEALE 576
V S A SL RL + YP ++L + YR H + ++ S FY+ L
Sbjct: 820 SPFVYSEFARERNLHVSLLDRLYEHYPSEYPCRILLCENYRSHEAIINYTSDLFYEGKLM 879
Query: 577 DGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISM 636
+ +D++ P +FF G++ Q S ++ N EV ++ ++
Sbjct: 880 ASGKQPPH--KDFY------PLTFFTAR-GEDVQEKNSTAYYNNAEVFEIVERVEEMRKK 930
Query: 637 YP----QLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAI 692
+P +L+ S + ++SPY QV + + ++ + V + V QG++ V
Sbjct: 931 WPVSWGKLEEGS-IGVVSPYADQVFRIRAELRK----KRMSEVSVERVLNVQGKQFRVLF 985
Query: 693 FSCVR 697
S VR
Sbjct: 986 LSTVR 990
Score = 59 (25.8 bits), Expect = 2.7e-08, Sum P(3) = 2.7e-08
Identities = 15/30 (50%), Positives = 18/30 (60%)
Query: 275 VLIQGPPGTGKTQTILGLLSAILHATPARV 304
VLI GP GTGKT T+ + IL +RV
Sbjct: 657 VLIIGPYGTGKTFTLAQAVKHILKQPESRV 686
Score = 37 (18.1 bits), Expect = 2.7e-08, Sum P(3) = 2.7e-08
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 78 AQIIQKKDEEEVQEWKLR 95
AQ +EE+ EW+ R
Sbjct: 187 AQCTSAHSQEELTEWQRR 204
Score = 37 (18.1 bits), Expect = 2.7e-08, Sum P(3) = 2.7e-08
Identities = 10/46 (21%), Positives = 22/46 (47%)
Query: 53 EVKDTYKDVDDYLATFEPLLFEEVKAQIIQKKDEEEVQEWKLRLVM 98
E+ T++ + EP+L + V +D E + + + +L+M
Sbjct: 347 EIFGTFRQTVVFDLGCEPVLMQRVMVDAASIEDLEHLLQARQQLLM 392
>UNIPROTKB|F1SRZ7 [details] [associations]
symbol:F1SRZ7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0097157 "pre-mRNA intronic binding" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IEA] InterPro:IPR024860
GO:GO:0005681 GO:GO:0000398 OMA:RTKAVGH GO:GO:0097157
PANTHER:PTHR10887:SF5 GeneTree:ENSGT00700000104467 EMBL:CU633172
Ensembl:ENSSSCT00000005301 Uniprot:F1SRZ7
Length = 1206
Score = 144 (55.7 bits), Expect = 5.2e-08, Sum P(2) = 5.2e-08
Identities = 68/281 (24%), Positives = 124/281 (44%)
Query: 448 RKDRDSIRSAILNEAVIVCSTLSFSGSAL--LSKLNHGFDVVIIDEAAQAVEPATLVPLA 505
R D + ++ EA I+ T + + L KL +D ++++EAAQ +E T +PL
Sbjct: 935 RSGLDRSKYLLVKEAKIIAMTCTHAALKRHDLVKLGFKYDNILMEEAAQILEIETFIPLL 994
Query: 506 --------TGCKQVFLVGDPVQLPATVISPVA--EHLGYGTSLFKRLQRAGYPVKMLKTQ 555
+ K+ ++GD QLP VI +A ++ SLF R R G P L Q
Sbjct: 995 LQNPQDGFSRLKRWIMIGDHHQLPP-VIKNMAFQKYSNMEQSLFTRFVRVGVPTVDLDAQ 1053
Query: 556 YRMHPEVRSFPSREFYDEA-LEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGS 614
R + + + + + L + +++T + F + D ES+P
Sbjct: 1054 GRARASLCNLYNWRYKNLGNLPHVQLLPEFSTANAGLLYDFQLINVEDFQGVGESEP-NP 1112
Query: 615 GSWINIDEVDFVLLLFHKLISM-YPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQ- 672
+ N+ E ++V+ LF + + YP + +++I++ Y Q ++ G
Sbjct: 1113 YFYQNLGEAEYVVALFMYMCLLGYP----ADKISILTTYNGQKHLIRDIINRRCGSNPLI 1168
Query: 673 -KVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRR 712
+ +TTVD QG++ D + S VR +++G L R+
Sbjct: 1169 GRPNKVTTVDRFQGQQNDYILLSLVRT---RAVGHLRYVRK 1206
Score = 72 (30.4 bits), Expect = 5.2e-08, Sum P(2) = 5.2e-08
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 260 SQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATP 301
+Q+EAI G+ + + GPPGTGKT + ++S I P
Sbjct: 722 TQIEAIRAGM-QPGLTMGVGPPGTGKTDVAVPIISNIYRNFP 762
>UNIPROTKB|J3QS41 [details] [associations]
symbol:HELZ "Probable helicase with zinc finger domain"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0008270 GO:GO:0003676 EMBL:AC005544 EMBL:AC007448
HGNC:HGNC:16878 ChiTaRS:HELZ Ensembl:ENST00000580168 Uniprot:J3QS41
Length = 1943
Score = 165 (63.1 bits), Expect = 8.5e-08, Sum P(3) = 8.5e-08
Identities = 70/251 (27%), Positives = 116/251 (46%)
Query: 458 ILNEAVIVCSTLSFSGSALLSKLNHGFDV-VIIDEAAQAVEPATLVPLATGCK--QVFLV 514
IL V+V TL+ S L GF +++DEAAQA+E T++PLA + ++ L
Sbjct: 763 ILKHRVVVV-TLNTSQYLCQLDLEPGFFTHILLDEAAQAMECETIMPLALATQNTRIVLA 821
Query: 515 GDPVQLPATVISPVAEHLGYGTSLFKRLQR---AGYPVKMLKTQ-YRMHPEVRSFPSREF 570
GD +QL V S A SL RL A +P ++L + YR H + ++ S F
Sbjct: 822 GDHMQLSPFVYSEFARERNLHVSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELF 881
Query: 571 YDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
Y+ L + +D++ P +FF G++ Q S ++ N EV V+
Sbjct: 882 YEGKLMASGKQPAH--KDFY------PLTFFTAR-GEDVQEKNSTAFYNNAEVFEVVERV 932
Query: 631 HKLISMYP----QLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGR 686
+L +P +L S + +++PY QV + + ++ + V++ V QG+
Sbjct: 933 EELRRKWPVAWGKLDDGS-IGVVTPYADQVFRIRAELRK----KRLSDVNVERVLNVQGK 987
Query: 687 EKDVAIFSCVR 697
+ V S VR
Sbjct: 988 QFRVLFLSTVR 998
Score = 54 (24.1 bits), Expect = 8.5e-08, Sum P(3) = 8.5e-08
Identities = 20/51 (39%), Positives = 24/51 (47%)
Query: 251 EYIKENHNASQLEAIHEGLLRKAF----VLIQGPPGTGKTQTILGLLSAIL 297
E + NA Q EA+ A VLI GP GTGKT T+ + IL
Sbjct: 636 EQLDPRLNAKQKEAVLAITTPLAIQLPPVLIIGPYGTGKTFTLAQAVKHIL 686
Score = 47 (21.6 bits), Expect = 8.5e-08, Sum P(3) = 8.5e-08
Identities = 15/75 (20%), Positives = 30/75 (40%)
Query: 53 EVKDTYKDVDDYLATFEPLLFEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVT 112
E+ T++ + EP+L + V +D E + K +LV D +
Sbjct: 356 EIFGTFRQTIVFDFGLEPVLMQRVMIDAASTEDLEYLMHAKQQLVTTAKRWDSSSKTIID 415
Query: 113 YEADEVESISPNDLL 127
+E +E + + L+
Sbjct: 416 FEPNETTDLEKSLLI 430
Score = 37 (18.1 bits), Expect = 8.4e-07, Sum P(3) = 8.4e-07
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 78 AQIIQKKDEEEVQEWKLR 95
AQ +EE+ EW+ R
Sbjct: 197 AQCTSAHSQEELAEWQKR 214
>UNIPROTKB|F1NPN9 [details] [associations]
symbol:LOC100857488 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR011990 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0008270 GO:GO:0003676 Gene3D:1.25.40.10 OMA:YRVALLY
GeneTree:ENSGT00550000074391 EMBL:AADN02030025 IPI:IPI00575663
Ensembl:ENSGALT00000005876 Uniprot:F1NPN9
Length = 1931
Score = 169 (64.5 bits), Expect = 2.0e-07, Sum P(3) = 2.0e-07
Identities = 73/253 (28%), Positives = 119/253 (47%)
Query: 458 ILNEAVIVCSTLSFSGSALLSKLNHGFDV-VIIDEAAQAVEPATLVPLATGCK--QVFLV 514
IL + V+V TL+ S L GF +++DEAAQA+E T++PLA K ++ L
Sbjct: 751 ILKQRVVVV-TLNTSQYLCQLDLEPGFFTHILLDEAAQAMECETIMPLALANKNTRIVLA 809
Query: 515 GDPVQLPATVISPVAEHLGYGTSLFKRLQR---AGYPVKMLKTQ-YRMHPEVRSFPSREF 570
GD +QL V S A SL RL A +P ++L + YR H + ++ S F
Sbjct: 810 GDHMQLSPFVYSEFARERNLHVSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELF 869
Query: 571 YDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
Y+ L + +D++ P +FF G++ Q S ++ N EV V+
Sbjct: 870 YEGKLMASGKQPAH--KDFY------PLTFFTAR-GEDVQEKNSTAFYNNAEVFEVVERV 920
Query: 631 HKLISMYP----QLKSSSQLAIISPYRHQVKQFQE--RFKETFGVESQKVVDITTVDGCQ 684
+L +P +L S + +++PY QV + + R K V ++V+++ Q
Sbjct: 921 EELRRKWPVAWGKLDDGS-IGVVTPYADQVFRIRAELRKKRLSDVSVERVLNV------Q 973
Query: 685 GREKDVAIFSCVR 697
G++ V S VR
Sbjct: 974 GKQFRVLFLSTVR 986
Score = 53 (23.7 bits), Expect = 2.0e-07, Sum P(3) = 2.0e-07
Identities = 13/23 (56%), Positives = 15/23 (65%)
Query: 275 VLIQGPPGTGKTQTILGLLSAIL 297
VLI GP GTGKT T+ + IL
Sbjct: 652 VLIIGPYGTGKTFTLAQAVKHIL 674
Score = 40 (19.1 bits), Expect = 2.0e-07, Sum P(3) = 2.0e-07
Identities = 13/69 (18%), Positives = 27/69 (39%)
Query: 53 EVKDTYKDVDDYLATFEPLLFEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVT 112
E+ T++ + EP+L + V +D E + + +L+ D V
Sbjct: 344 EIFGTFRQTVVFDFGLEPVLMQRVMIDAASTEDLEYLMHARQQLLTTAKRWDSTSKTIVE 403
Query: 113 YEADEVESI 121
+E +E +
Sbjct: 404 FEPNETTEL 412
Score = 38 (18.4 bits), Expect = 3.2e-07, Sum P(3) = 3.2e-07
Identities = 12/36 (33%), Positives = 15/36 (41%)
Query: 149 VEHCQANLLRLRMYLAG---EVIHINKDAVKSQRLL 181
V+HC LL L Y E D +K + LL
Sbjct: 15 VKHCTEALLSLSQYPPAHLPEACQAEIDRIKIETLL 50
Score = 37 (18.1 bits), Expect = 4.0e-07, Sum P(3) = 4.0e-07
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 78 AQIIQKKDEEEVQEWKLR 95
AQ +EE+ EW+ R
Sbjct: 185 AQCTSAHSQEELTEWQKR 202
>RGD|1307049 [details] [associations]
symbol:Helz "helicase with zinc finger" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 RGD:1307049
GO:GO:0008270 GO:GO:0003676 CTD:9931 OrthoDB:EOG4NP72K OMA:YRVALLY
GeneTree:ENSGT00550000074391 IPI:IPI00364329 RefSeq:NP_001099318.2
ProteinModelPortal:D4ADZ6 Ensembl:ENSRNOT00000030300 GeneID:287773
KEGG:rno:287773 Uniprot:D4ADZ6
Length = 1964
Score = 169 (64.5 bits), Expect = 2.7e-07, Sum P(3) = 2.7e-07
Identities = 71/251 (28%), Positives = 116/251 (46%)
Query: 458 ILNEAVIVCSTLSFSGSALLSKLNHGFDV-VIIDEAAQAVEPATLVPLATGCK--QVFLV 514
IL V+V TL+ S L GF +++DEAAQA+E T++PLA K ++ L
Sbjct: 763 ILKHRVVVV-TLNTSQYLCQLDLEPGFFTHILLDEAAQAMECETIMPLALATKNTRIVLA 821
Query: 515 GDPVQLPATVISPVAEHLGYGTSLFKRLQR---AGYPVKMLKTQ-YRMHPEVRSFPSREF 570
GD +QL V S A SL RL A +P ++L + YR H + ++ S F
Sbjct: 822 GDHMQLSPFVYSEFARERNLHVSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELF 881
Query: 571 YDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
Y+ L + +D++ P +FF G++ Q S ++ N EV V+
Sbjct: 882 YEGKLMASGKQPAH--KDFY------PLTFFTAR-GEDVQEKNSTAFYNNAEVFEVVERV 932
Query: 631 HKLISMYP----QLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGR 686
+L +P +L S + +++PY QV + + ++ + V++ V QG+
Sbjct: 933 EELRRKWPVAWGKLDDGS-IGVVTPYADQVFRIRAELRK----KRLSDVNVERVLNVQGK 987
Query: 687 EKDVAIFSCVR 697
+ V S VR
Sbjct: 988 QFRVLFLSTVR 998
Score = 53 (23.7 bits), Expect = 2.7e-07, Sum P(3) = 2.7e-07
Identities = 13/23 (56%), Positives = 15/23 (65%)
Query: 275 VLIQGPPGTGKTQTILGLLSAIL 297
VLI GP GTGKT T+ + IL
Sbjct: 664 VLIIGPYGTGKTFTLAQAVKHIL 686
Score = 39 (18.8 bits), Expect = 2.7e-07, Sum P(3) = 2.7e-07
Identities = 14/65 (21%), Positives = 26/65 (40%)
Query: 53 EVKDTYKDVDDYLATFEPLLFEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVT 112
E+ T++ + EP+L + V +D E + K +LV + V
Sbjct: 356 EIFGTFRQTIVFDFGLEPVLMQRVMIDAASTEDLEYLMHAKQQLVTTARRWEPSSKTIVD 415
Query: 113 YEADE 117
+E +E
Sbjct: 416 FEPNE 420
Score = 37 (18.1 bits), Expect = 4.2e-07, Sum P(3) = 4.2e-07
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 78 AQIIQKKDEEEVQEWKLR 95
AQ +EE+ EW+ R
Sbjct: 197 AQCTSAHSQEELAEWQKR 214
>WB|WBGene00010989 [details] [associations]
symbol:R03D7.2 species:6239 "Caenorhabditis elegans"
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
GO:GO:0006974 EMBL:Z46828 PIR:T23869 RefSeq:NP_496354.1
ProteinModelPortal:Q09594 SMR:Q09594 EnsemblMetazoa:R03D7.2
GeneID:174682 KEGG:cel:CELE_R03D7.2 UCSC:R03D7.2 CTD:174682
WormBase:R03D7.2 eggNOG:KOG1801 GeneTree:ENSGT00530000065249
InParanoid:Q09594 NextBio:885046 Uniprot:Q09594
Length = 542
Score = 148 (57.2 bits), Expect = 9.2e-07, P = 9.2e-07
Identities = 74/308 (24%), Positives = 122/308 (39%)
Query: 429 LVEQKRDDSAADKQKHG--ATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDV 486
+V+Q+ D ++ G A + R + ++ A + L+FS + L ++ FD+
Sbjct: 162 VVQQEEDMDIDEELLLGPVAEEEPRGYVPPLVIGTAAAI--KLAFSQAPFL-EIKDRFDI 218
Query: 487 VIIDEAAQAVEPATLVPLATGC--KQVFLVGDPVQLPATVISPVAEHL---GYGTSLFKR 541
IDEA+Q + L LAT ++ LVGD QLP + + L G L
Sbjct: 219 TFIDEASQ-LALYVLGSLATMLPKSRMILVGDMHQLPPYMEEALPAELKRAAIGEPLTLA 277
Query: 542 LQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSD-VEDYTTRDWHEYRCFGPFSF 600
++ +P L +R + FY L V D P F
Sbjct: 278 VKGRRWPSMHLTRVHRCPKMITEVLGDLFYGNTLTSSKPGVTDIPVLKAMGLPSRHPMVF 337
Query: 601 FDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQ 660
+ Q A S+ N E + L L L AI++ Y Q
Sbjct: 338 VNY---TSPQTAVGKSFSNEGEARYALQLVEALTRYASTANKKITAAILNFYGAQ----- 389
Query: 661 ERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRA 720
+ + + +V + T+DGCQG+E DV I R+ + FL + R+NV ++R
Sbjct: 390 --YSYVYSMAEDEVT-VNTIDGCQGQEYDVTIVLLTRSDPYERSKFLVNANRINVALSRP 446
Query: 721 KSSILVVG 728
K + +++G
Sbjct: 447 KIATVIIG 454
>WB|WBGene00019529 [details] [associations]
symbol:K08D10.5 species:6239 "Caenorhabditis elegans"
[GO:0004386 "helicase activity" evidence=IEA] eggNOG:COG1112
EMBL:FO081596 GeneTree:ENSGT00530000065249 PIR:T29386
RefSeq:NP_500503.1 UniGene:Cel.27256 ProteinModelPortal:Q21321
SMR:Q21321 PaxDb:Q21321 EnsemblMetazoa:K08D10.5 GeneID:187150
KEGG:cel:CELE_K08D10.5 UCSC:K08D10.5 CTD:187150 WormBase:K08D10.5
InParanoid:Q21321 OMA:KEINIFR NextBio:934280 Uniprot:Q21321
Length = 602
Score = 145 (56.1 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 64/261 (24%), Positives = 113/261 (43%)
Query: 477 LSKLNHGFDVVIIDEAAQAV-----EPATLVPLATGCKQVFLVGDPVQLPATVISPVAEH 531
L+++ FD+ IDEA+Q ATL+P ++ LVGD QLP +
Sbjct: 308 LAEIKDLFDITFIDEASQLALYVLGSLATLLPKT----RIILVGDMHQLPPYTEDALPAE 363
Query: 532 L---GYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSD-VEDYTTR 587
L G L ++ + L +R + FY L V
Sbjct: 364 LKRAAVGEPLTLAVKGRRWSSMHLTRVHRCPKMITDLLGAVFYGNTLTSTRKAVNRVPIL 423
Query: 588 DWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLA 647
+ E PF F + + +++Q G S+ N +E + L L L + ++ +A
Sbjct: 424 EAMELPSHHPFVFVN-YISQQTQ-VGK-SFSNENEARYALQLVTALKRHAREQNTTVSVA 480
Query: 648 IISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFL 707
+++ Y Q + + + ++ V + T+DGCQG+E DV+I R+ + FL
Sbjct: 481 VLNFYGAQ-------YSYVYSI-AEDGVRVNTIDGCQGQEYDVSIVLLTRSDPYEKSKFL 532
Query: 708 ADYRRMNVGITRAKSSILVVG 728
+ R+NV ++R+K + +V+G
Sbjct: 533 VNPNRINVALSRSKMATVVIG 553
>UNIPROTKB|F1MKC7 [details] [associations]
symbol:Bt.110099 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR011990 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0008270 GO:GO:0003676 Gene3D:1.25.40.10 OMA:YRVALLY
GeneTree:ENSGT00550000074391 EMBL:DAAA02049790 EMBL:DAAA02049791
EMBL:DAAA02049792 EMBL:DAAA02049793 EMBL:DAAA02049794
EMBL:DAAA02049795 EMBL:DAAA02049796 EMBL:DAAA02049797
EMBL:DAAA02049798 EMBL:DAAA02049799 IPI:IPI00698970
Ensembl:ENSBTAT00000006233 Uniprot:F1MKC7
Length = 1941
Score = 166 (63.5 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 72/251 (28%), Positives = 115/251 (45%)
Query: 458 ILNEAVIVCSTLSFSGSALLSKLNHGFDV-VIIDEAAQAVEPATLVPLATGCK--QVFLV 514
IL V+V TL+ S L GF +++DEAAQA+E T++PLA + +V L
Sbjct: 767 ILKHRVVVV-TLNTSQYLCQLDLEPGFFTHILLDEAAQAMECETIMPLALATRHTRVVLA 825
Query: 515 GDPVQLPATVISPVAEHLGYGTSLFKRLQR---AGYPVKMLKTQ-YRMHPEVRSFPSREF 570
GD +QL V S A SL RL A +P ++L + YR H + ++ S F
Sbjct: 826 GDHMQLSPFVYSEFARERNLHVSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELF 885
Query: 571 YDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
Y+ L + H+ F P +FF G++ Q S ++ N EV V+
Sbjct: 886 YEGKLMASGK------QPAHKE--FYPLTFFTAR-GEDVQEKNSTAFYNNAEVFEVVERV 936
Query: 631 HKLISMYP----QLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGR 686
+L +P +L S + +++PY QV + + ++ + V++ V QG+
Sbjct: 937 EELRRKWPVAWGKLDDGS-IGVVTPYADQVFRIRAELRK----KRLSDVNVERVLNVQGK 991
Query: 687 EKDVAIFSCVR 697
+ V S VR
Sbjct: 992 QFRVLFLSTVR 1002
Score = 37 (18.1 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 78 AQIIQKKDEEEVQEWKLR 95
AQ +EE+ EW+ R
Sbjct: 197 AQCTSAHSQEELAEWQKR 214
>UNIPROTKB|Q8EA89 [details] [associations]
symbol:SO_4019 "P-loop containing nucleoside triphosphate
hydrolase superfamily" species:211586 "Shewanella oneidensis MR-1"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001261 PROSITE:PS00758 GO:GO:0006508
GO:GO:0008237 EMBL:AE014299 GenomeReviews:AE014299_GR
RefSeq:NP_719549.1 ProteinModelPortal:Q8EA89 GeneID:1171647
KEGG:son:SO_4019 PATRIC:23527708 HOGENOM:HOG000221837 OMA:HRPCTSS
ProtClustDB:CLSK907456 Uniprot:Q8EA89
Length = 907
Score = 104 (41.7 bits), Expect = 2.5e-05, Sum P(3) = 2.5e-05
Identities = 42/176 (23%), Positives = 73/176 (41%)
Query: 549 VKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKE 608
V L +R PE+ F +++FY L+ T H +R +H
Sbjct: 608 VVFLNEHFRSKPELIQFSNQQFYQGMLKIMQHRP--CTSSGHLHR---------VHVTGS 656
Query: 609 SQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFG 668
G IN E + ++ +LI S + ++S +R+Q + ++ F
Sbjct: 657 RDSKG----INAIEAEALIQKLSQLIDEQENALVPSSIGVLSCFRNQAEYLSQQILARFS 712
Query: 669 VES--QKVVDITTVDGCQGREKDVAIFS-CVRASDKKSIGFLADYRRMNVGITRAK 721
+ + + I T G QG E+D+ + S + A+D ++ +L NV ITRAK
Sbjct: 713 AQQLERHQLRIATPFGFQGEERDIMLLSFSITANDSRAAVYLNREDMFNVAITRAK 768
Score = 73 (30.8 bits), Expect = 2.5e-05, Sum P(3) = 2.5e-05
Identities = 28/80 (35%), Positives = 38/80 (47%)
Query: 441 KQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPAT 500
KQ G + D D+++ I S+L+ S +L FD+VIIDEA QA A
Sbjct: 486 KQLDGFYKTDFDALKQTF----PIWLSSLA-SLHKVLPMEQQMFDLVIIDEATQA-NIAA 539
Query: 501 LVPLATGCKQVFLVGDPVQL 520
+P K +VGD QL
Sbjct: 540 CLPALQRAKAALVVGDSKQL 559
Score = 56 (24.8 bits), Expect = 2.5e-05, Sum P(3) = 2.5e-05
Identities = 22/67 (32%), Positives = 30/67 (44%)
Query: 224 FKDLILSASEKSSGSQD-QSWKIPGLLHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPG 282
F D + S S D Q +PGLL + +Q++A+ I GPPG
Sbjct: 233 FADTPPTGINNISASVDTQEAYLPGLL--------SRAQIQALKVAA-NHTLGQISGPPG 283
Query: 283 TGKTQTI 289
TGK+ TI
Sbjct: 284 TGKSYTI 290
>TIGR_CMR|SO_4019 [details] [associations]
symbol:SO_4019 "hypothetical protein" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001261
PROSITE:PS00758 GO:GO:0006508 GO:GO:0008237 EMBL:AE014299
GenomeReviews:AE014299_GR RefSeq:NP_719549.1
ProteinModelPortal:Q8EA89 GeneID:1171647 KEGG:son:SO_4019
PATRIC:23527708 HOGENOM:HOG000221837 OMA:HRPCTSS
ProtClustDB:CLSK907456 Uniprot:Q8EA89
Length = 907
Score = 104 (41.7 bits), Expect = 2.5e-05, Sum P(3) = 2.5e-05
Identities = 42/176 (23%), Positives = 73/176 (41%)
Query: 549 VKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKE 608
V L +R PE+ F +++FY L+ T H +R +H
Sbjct: 608 VVFLNEHFRSKPELIQFSNQQFYQGMLKIMQHRP--CTSSGHLHR---------VHVTGS 656
Query: 609 SQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFG 668
G IN E + ++ +LI S + ++S +R+Q + ++ F
Sbjct: 657 RDSKG----INAIEAEALIQKLSQLIDEQENALVPSSIGVLSCFRNQAEYLSQQILARFS 712
Query: 669 VES--QKVVDITTVDGCQGREKDVAIFS-CVRASDKKSIGFLADYRRMNVGITRAK 721
+ + + I T G QG E+D+ + S + A+D ++ +L NV ITRAK
Sbjct: 713 AQQLERHQLRIATPFGFQGEERDIMLLSFSITANDSRAAVYLNREDMFNVAITRAK 768
Score = 73 (30.8 bits), Expect = 2.5e-05, Sum P(3) = 2.5e-05
Identities = 28/80 (35%), Positives = 38/80 (47%)
Query: 441 KQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPAT 500
KQ G + D D+++ I S+L+ S +L FD+VIIDEA QA A
Sbjct: 486 KQLDGFYKTDFDALKQTF----PIWLSSLA-SLHKVLPMEQQMFDLVIIDEATQA-NIAA 539
Query: 501 LVPLATGCKQVFLVGDPVQL 520
+P K +VGD QL
Sbjct: 540 CLPALQRAKAALVVGDSKQL 559
Score = 56 (24.8 bits), Expect = 2.5e-05, Sum P(3) = 2.5e-05
Identities = 22/67 (32%), Positives = 30/67 (44%)
Query: 224 FKDLILSASEKSSGSQD-QSWKIPGLLHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPG 282
F D + S S D Q +PGLL + +Q++A+ I GPPG
Sbjct: 233 FADTPPTGINNISASVDTQEAYLPGLL--------SRAQIQALKVAA-NHTLGQISGPPG 283
Query: 283 TGKTQTI 289
TGK+ TI
Sbjct: 284 TGKSYTI 290
>UNIPROTKB|Q2KFA1 [details] [associations]
symbol:MGCH7_ch7g785 "Putative uncharacterized protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:CM000230 Uniprot:Q2KFA1
Length = 852
Score = 92 (37.4 bits), Expect = 0.00085, Sum P(3) = 0.00085
Identities = 29/92 (31%), Positives = 45/92 (48%)
Query: 646 LAIISPYRHQVKQFQE-------RFKETFGVESQKVV---DITTVDGCQGREKDVAIFSC 695
+ II+PYR V Q++ E GV ++ ++ ++ +VD QG E D F
Sbjct: 704 ILIIAPYRQAVTQYKRAAGDLCRELAEAQGVPAKTMLTRLEVRSVDTVQGHEADFVFFDL 763
Query: 696 VRASDKKSIGFLADYRRMNVGITRAKSSILVV 727
VR +K FL D +R+ V TRA+ + V
Sbjct: 764 VR---EKPTEFLDDDKRLAVATTRARQGEVYV 792
Score = 80 (33.2 bits), Expect = 0.00085, Sum P(3) = 0.00085
Identities = 28/96 (29%), Positives = 40/96 (41%)
Query: 485 DVVIIDEAAQAVEPATLVPLATGCKQVFL-VGDPVQLPATVISPVAE-HLGYGTSLFKRL 542
D+V+ DEA A E A L+P+A ++ GD Q V S + S+ +R
Sbjct: 525 DIVLFDEAPHARELANLIPIAHFSPMAWIFTGDFRQTGCYVGSDKNPWEIQLKMSVMERA 584
Query: 543 QRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDG 578
AG L +R + PS FYD + G
Sbjct: 585 HYAGATTHELLMNHRAFATLHQMPSNLFYDAKMVTG 620
Score = 45 (20.9 bits), Expect = 0.00085, Sum P(3) = 0.00085
Identities = 20/59 (33%), Positives = 28/59 (47%)
Query: 258 NASQLEAIHEGLLRK--AFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLREIK 314
N QL E L R +I G PG GKT + LL+A+ A + ++ G R +K
Sbjct: 282 NPQQLATYTELLQRLPCGVGIIPGGPGGGKTFFNM-LLTAM--AQSQELKTEDGTRRVK 337
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.134 0.392 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 824 789 0.00095 121 3 11 22 0.41 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 172
No. of states in DFA: 624 (66 KB)
Total size of DFA: 404 KB (2197 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 70.93u 0.11s 71.04t Elapsed: 00:00:04
Total cpu time: 70.98u 0.11s 71.09t Elapsed: 00:00:04
Start: Tue May 21 02:49:43 2013 End: Tue May 21 02:49:47 2013
WARNINGS ISSUED: 1