BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003388
(824 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225461912|ref|XP_002265434.1| PREDICTED: probable helicase DDB_G0274399-like [Vitis vinifera]
Length = 831
Score = 1175 bits (3039), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 578/811 (71%), Positives = 677/811 (83%), Gaps = 7/811 (0%)
Query: 3 VDKDKPQDEASIFRFCKIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVD 62
VDK ++EA I RFCKI+LGWDY +L+KES+++N +N D GLR+VKDTY D+D
Sbjct: 4 VDKKSLEEEACILRFCKIVLGWDYVQLLKESKQKNSRNIG--DGSAPGLRKVKDTYTDID 61
Query: 63 DYLATFEPLLFEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADEVESIS 122
DYLATFEPLLFEEVKAQI+Q +DEEEV EWK +V EC E DGF +P V Y+A+E ESIS
Sbjct: 62 DYLATFEPLLFEEVKAQIVQGRDEEEVSEWKFAIVRECSETDGFSIPVVGYKAEEGESIS 121
Query: 123 PNDLLLLSKEEF-KEGSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKS-QRL 180
NDLLLLSK + +G+ PTTYAFAL EH Q +LLR+RM+L GEV IN D V S RL
Sbjct: 122 QNDLLLLSKTKVPTQGTRLPTTYAFALAEHRQGDLLRVRMWLDGEVKGINTDEVVSCPRL 181
Query: 181 LNIHSLITSSVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQD 240
L++HSLI + ++ + L+ LKICSLSTI REY+ L+S+GSLPFKDLIL+A++ S +
Sbjct: 182 LSMHSLIGNLINDPNRGLYILKICSLSTIVREYIGLQSIGSLPFKDLILTATDSSPSPGE 241
Query: 241 QSWKIPGLLHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHAT 300
QSWKIP L E+I+ NHN SQL AIH L RKAFVLIQGPPGTGKTQTILGLLSAILHAT
Sbjct: 242 QSWKIPRPLMEFIETNHNESQLAAIHASLSRKAFVLIQGPPGTGKTQTILGLLSAILHAT 301
Query: 301 PARVHSKGGLREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNE 360
PARVHS+GGL EIKRGP LP+ EKY WG+ASPWL G NPRD I+P DGDDG FPTTGNE
Sbjct: 302 PARVHSRGGLSEIKRGPYLPLQEKYVMWGQASPWLTGINPRDEIVPKDGDDGVFPTTGNE 361
Query: 361 LKPEVVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHS 420
LKPE+V SSR+YRVRVLVCAPSNSALDEIVLRLLNTG+RDEN +Y PKIVRIGLK HHS
Sbjct: 362 LKPEIVTSSRKYRVRVLVCAPSNSALDEIVLRLLNTGVRDENDHAYNPKIVRIGLKPHHS 421
Query: 421 VNSVAIDHLVEQKRD--DSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLS 478
V +V++D+LVEQK +S +DKQKHGA +DRDS+RS+IL+EA IV STLSFSGS+L S
Sbjct: 422 VRAVSMDYLVEQKLSSMNSTSDKQKHGAAGRDRDSVRSSILSEAAIVFSTLSFSGSSLFS 481
Query: 479 KLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSL 538
KLN GFDVVIIDEAAQAVEPATLVPLA GCKQVFLVGDPVQLPATVISP+AE GYG SL
Sbjct: 482 KLNSGFDVVIIDEAAQAVEPATLVPLANGCKQVFLVGDPVQLPATVISPIAEKFGYGMSL 541
Query: 539 FKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPF 598
FKR QRAGYPV+MLKTQYRMHPE+RSFPS+EFYDEALEDG DV+D T R WH+YRCFGPF
Sbjct: 542 FKRFQRAGYPVQMLKTQYRMHPEIRSFPSKEFYDEALEDGPDVKDQTVRLWHDYRCFGPF 601
Query: 599 SFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQ 658
FFDIHEGKESQP+GSGSW+N+DEV+FVLL++HKL++ YP+LKSSS+LAIISPYRHQVK
Sbjct: 602 CFFDIHEGKESQPSGSGSWVNVDEVEFVLLMYHKLVTRYPELKSSSRLAIISPYRHQVKL 661
Query: 659 FQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGIT 718
F+ERF++TFGVES KVVDI TVDG QGREKDVAIFSCVRAS K IGF+AD+RRMNVGIT
Sbjct: 662 FRERFQDTFGVESDKVVDINTVDGFQGREKDVAIFSCVRASKDKGIGFVADFRRMNVGIT 721
Query: 719 RAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRVSKPYASFFSDENLESMRKNATTD 778
RA++S+LVVG ASTL++D+HWNNL++SAEK++CL +VSKPY +FFSDENL+SM +
Sbjct: 722 RARASVLVVGSASTLKKDEHWNNLLESAEKRNCLLKVSKPYTAFFSDENLKSMVAKDQS- 780
Query: 779 NVQGADGHVPHDDETMHYANTGDADQGQADD 809
+ A+G + D+ Y+N GDA+QGQA D
Sbjct: 781 MPEDAEGGMAVDNNAPIYSNLGDAEQGQAAD 811
>gi|255556880|ref|XP_002519473.1| conserved hypothetical protein [Ricinus communis]
gi|223541336|gb|EEF42887.1| conserved hypothetical protein [Ricinus communis]
Length = 826
Score = 1141 bits (2951), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 554/810 (68%), Positives = 657/810 (81%), Gaps = 7/810 (0%)
Query: 1 MAVDKDKPQDEASIFRFCKIILGWDYFRLVKESQERNDKNSKKVDRGKL--GLREVKDTY 58
MAVD DK +EAS RFCKI+LGWDYF L+KE + K K D G GLR+VK++Y
Sbjct: 1 MAVDVDKLLEEASFARFCKIVLGWDYFSLLKEYDKEKQKERGKSDNGDATSGLRQVKNSY 60
Query: 59 KDVDDYLATFEPLLFEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADEV 118
KDVD+YL TFEPLLFEEVKAQIIQ+KD+EEV +RLV+EC EA+GF P+V++ +E
Sbjct: 61 KDVDEYLETFEPLLFEEVKAQIIQRKDDEEVTTSVMRLVLECNEAEGFLFPAVSFGGEED 120
Query: 119 ESISPNDLLLLSKEEFKEGSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQ 178
E IS NDLLLLSKE+ K+ P +AFALVEH Q + RLRM+L GEV +N D +++
Sbjct: 121 ERISQNDLLLLSKEKIKDSRKLPEVHAFALVEHRQHDRYRLRMFLDGEVRQLNFDNLETH 180
Query: 179 -RLLNIHSLITSSVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSG 237
RLL + + +T+ EK +FSLKICSLSTI+REYLALRS+ SLPFKDLIL A++ ++G
Sbjct: 181 PRLLKMRAFMTAPRKPEEKPIFSLKICSLSTISREYLALRSISSLPFKDLILKATDINAG 240
Query: 238 SQDQSWKIPGLLHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAIL 297
S++Q+WK+ L EY K N N SQLEAI+ GL RKAFVLIQGPPGTGKTQTIL LLS IL
Sbjct: 241 SEEQAWKVSVPLREYFKGNLNKSQLEAINAGLSRKAFVLIQGPPGTGKTQTILALLSVIL 300
Query: 298 HATPARVHSKGGLREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTT 357
HA+PARV +KG REIKRGP LP+ EKYNHW RASPW++G NPRDNIMP DGDDG+FPTT
Sbjct: 301 HASPARVLTKGTSREIKRGPALPIQEKYNHWARASPWMIGNNPRDNIMPKDGDDGYFPTT 360
Query: 358 GNELKPEVVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKA 417
GNELKPEVV S+RRYRVR+LVCAPSNSALDEIVLRLL G+RDENI +Y PKIVRIGLKA
Sbjct: 361 GNELKPEVVASNRRYRVRILVCAPSNSALDEIVLRLLRFGVRDENIHTYNPKIVRIGLKA 420
Query: 418 HHSVNSVAIDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALL 477
HHSV SV +D+LV+QK+ +SAADKQKHGA D D+IR+AIL+EAVIV STLSFSGSA+
Sbjct: 421 HHSVQSVCMDYLVKQKQGESAADKQKHGAVGGDTDTIRTAILDEAVIVFSTLSFSGSAMF 480
Query: 478 SKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTS 537
SKLNHGFDVVIIDEAAQAVEPATLVPLA GCKQVFLVGDP QLPATVISP+AE GY TS
Sbjct: 481 SKLNHGFDVVIIDEAAQAVEPATLVPLANGCKQVFLVGDPKQLPATVISPIAEKFGYKTS 540
Query: 538 LFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGP 597
LF+RLQRAGYPV MLK QYRMHP++R FPS+EFY E L+D +++ T RDWHEYRCFGP
Sbjct: 541 LFERLQRAGYPVNMLKMQYRMHPQIRDFPSKEFYSEELQDAEKMDEKTKRDWHEYRCFGP 600
Query: 598 FSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVK 657
F FFDIHEGKESQP+GSGSW+N DEVDFVL ++HKL++M+P+L+SSSQ AIISPYR+QVK
Sbjct: 601 FCFFDIHEGKESQPSGSGSWVNNDEVDFVLHMYHKLVTMHPKLRSSSQFAIISPYRNQVK 660
Query: 658 QFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGI 717
Q+RF++ FG ES++ VDI TVDG QGREKDVAIFSCVRA+ + IGF++D RRMNVGI
Sbjct: 661 LLQDRFRDMFGQESEQFVDIQTVDGFQGREKDVAIFSCVRANKDRGIGFVSDSRRMNVGI 720
Query: 718 TRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRVSKPYASFFSDENLESMRKNATT 777
TRAKS++LVVG ASTL+ D+ W LV+SAE++ LF+V KPY SFFSD NLESM+ TT
Sbjct: 721 TRAKSTVLVVGSASTLKSDESWKRLVESAEQRGVLFKVDKPYDSFFSDSNLESMK---TT 777
Query: 778 DNVQGADGHVPHDDETMHY-ANTGDADQGQ 806
+N+ G + +D T+ N GDADQGQ
Sbjct: 778 ENLPGRNDEDQENDMTVAMQGNVGDADQGQ 807
>gi|42566850|ref|NP_193292.3| protein MAGATAMA 3 [Arabidopsis thaliana]
gi|384950687|sp|B6SFA4.1|MAA3_ARATH RecName: Full=Probable helicase MAGATAMA 3; AltName: Full=SEN1-like
protein
gi|209574484|gb|ACI63222.1| MAA3 [Arabidopsis thaliana]
gi|332658227|gb|AEE83627.1| protein MAGATAMA 3 [Arabidopsis thaliana]
Length = 818
Score = 1108 bits (2867), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 545/806 (67%), Positives = 658/806 (81%), Gaps = 21/806 (2%)
Query: 1 MAVDKDKPQDE--ASIFRFCKIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTY 58
MA+D K Q+E +S+ RF IILGWDY +L KE++ +N K+SK+ L VK+TY
Sbjct: 1 MAIDNGKLQEEEASSVTRFYNIILGWDYKQLTKENERKNRKDSKE------KLNVVKNTY 54
Query: 59 KDVDDYLATFEPLLFEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADEV 118
KDVDDY TFEPLLFEEVKAQI+Q KD EE K+RLVMEC E +GFH VTYE +E
Sbjct: 55 KDVDDYFETFEPLLFEEVKAQILQNKDGEEASVCKMRLVMECNEGEGFHFLLVTYEHEED 114
Query: 119 ESISPNDLLLLSKEEFKEGSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKS- 177
E ++ NDLLLLSKEE K G++FP++Y FA+VEH Q NLLRLRMYLA +++ I K+ S
Sbjct: 115 EYLAQNDLLLLSKEEVK-GNSFPSSYGFAVVEHRQNNLLRLRMYLAEDIVQITKNTKSSR 173
Query: 178 -----QRLLNIHSLITSSVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSAS 232
Q L N+ SLITSS S ++KR+FSLK+C LSTI REY+ALRSV SLPFKDLI +A+
Sbjct: 174 TKSFIQALSNMRSLITSSASPIDKRVFSLKLCGLSTIIREYIALRSVSSLPFKDLIFTAA 233
Query: 233 EKSSGSQDQSWKIPGLLHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGL 292
EKS G D++WKI G L+E+ EN N SQ EAI GL RK+FVLIQGPPGTGKTQTIL +
Sbjct: 234 EKSCGFGDEAWKISGPLNEFFNENLNKSQKEAIDVGLSRKSFVLIQGPPGTGKTQTILSI 293
Query: 293 LSAILHATPARVHSKGGLREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDG 352
L AI+HATPARV SKG E+KRG ++ + EKYNHWGRASPW++G NPRD IMP DGDDG
Sbjct: 294 LGAIMHATPARVQSKGTDHEVKRGIQMTIQEKYNHWGRASPWILGVNPRDAIMPEDGDDG 353
Query: 353 FFPTTGNELKPEVVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
FFPT+GNELKPEVVN+SR+YR+RVLVCAPSNSALDEIVLRLL++G+RDEN ++YTPKIVR
Sbjct: 354 FFPTSGNELKPEVVNASRKYRLRVLVCAPSNSALDEIVLRLLSSGLRDENAQTYTPKIVR 413
Query: 413 IGLKAHHSVNSVAIDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFS 472
IGLKAHHSV SV++DHLV QKR SA DK K G T D DSIR+AIL EA IV +TLSFS
Sbjct: 414 IGLKAHHSVASVSLDHLVAQKR-GSAIDKPKQGTTGTDIDSIRTAILEEAAIVFATLSFS 472
Query: 473 GSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHL 532
GSALL+K N GFDVVIIDEAAQAVEPATL+PLAT CKQVFLVGDP QLPATVIS VA+
Sbjct: 473 GSALLAKSNRGFDVVIIDEAAQAVEPATLIPLATRCKQVFLVGDPKQLPATVISTVAQDS 532
Query: 533 GYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEY 592
GYGTS+F+RLQ+AGYPVKMLKTQYRMHPE+RSFPS++FY+ ALEDGSD+E TTRDWH+Y
Sbjct: 533 GYGTSMFERLQKAGYPVKMLKTQYRMHPEIRSFPSKQFYEGALEDGSDIEAQTTRDWHKY 592
Query: 593 RCFGPFSFFDIHEGKESQ-PAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISP 651
RCFGPF FFDIHEGKESQ P +GS +N+DEV+FVLL++H+L++MYP+LKSSSQLAIISP
Sbjct: 593 RCFGPFCFFDIHEGKESQHPGATGSRVNLDEVEFVLLIYHRLVTMYPELKSSSQLAIISP 652
Query: 652 YRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYR 711
Y +QVK F++RFKE FG E++KVVDI TVDG QGREKDVAIFSCVRA++ IGFL++ R
Sbjct: 653 YNYQVKTFKDRFKEMFGTEAEKVVDINTVDGFQGREKDVAIFSCVRANENGQIGFLSNSR 712
Query: 712 RMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRVSKPYASFFSDENLESM 771
RMNVGITRAKSS+LVVG A+TL+ D W NL++SAE+++ LF+VSKP +FFS+ENLE+M
Sbjct: 713 RMNVGITRAKSSVLVVGSAATLKSDPLWKNLIESAEQRNRLFKVSKPLNNFFSEENLETM 772
Query: 772 RKNATTDNVQGADGHVPHDDETMHYA 797
+ T++++ D + ++DE++ A
Sbjct: 773 K---LTEDMEIPDAPL-YEDESLPVA 794
>gi|449434252|ref|XP_004134910.1| PREDICTED: probable helicase MAGATAMA 3-like [Cucumis sativus]
Length = 841
Score = 1053 bits (2724), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 539/847 (63%), Positives = 651/847 (76%), Gaps = 36/847 (4%)
Query: 1 MAVDKDKPQDEASIFRFCKIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKD 60
MAVDK+K +E+ R KIIL WDYFRL+K S++R + + D LGL+EVK TYKD
Sbjct: 1 MAVDKEKAVEESVTSRLFKIILSWDYFRLLKNSKKRKENDG---DGASLGLKEVKSTYKD 57
Query: 61 VDDYLATFEPLLFEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADE--- 117
VDDY +TFEPLL EE+KAQIIQ+ ++EE +WK R +MEC E +GFH P + Y DE
Sbjct: 58 VDDYTSTFEPLLLEEIKAQIIQRNEDEEASDWKFRAIMECSEVNGFHFPEMVYLRDEDLK 117
Query: 118 ------VESISPNDLLLLSKEEFKEGSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHIN 171
+ +SPNDLLLLSKE+F+E + PTTYAFALVE Q + LRLRMYLAGEV H +
Sbjct: 118 DEDSEKGDFLSPNDLLLLSKEKFQENTKLPTTYAFALVESRQQSKLRLRMYLAGEVTHKD 177
Query: 172 KDA-VKSQRLLNIHSLITSSVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILS 230
+A V S RLL + S ITSS S ++SLKICSLSTI REY+AL S+ SLPFK++IL+
Sbjct: 178 VEAIVSSPRLLKVRSHITSS-SKDGIYIYSLKICSLSTIIREYIALWSISSLPFKEMILA 236
Query: 231 ASEKSSGSQDQSWKIPGLLHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTIL 290
A++K++G +DQ+WKI L +Y++EN N SQ A+ GL RK FVLIQGPPGTGKTQTIL
Sbjct: 237 ATDKNTG-KDQAWKISKPLQDYMQENLNESQQAAVQAGLSRKPFVLIQGPPGTGKTQTIL 295
Query: 291 GLLSAILHATPARVHSKGGLREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGD 350
GLLSAILHATPAR+HS GL E + G ELP+ EKY+HW +ASPWL G NPRD++MP++GD
Sbjct: 296 GLLSAILHATPARMHSTIGLIETRHGSELPVREKYDHWNQASPWLNGINPRDDLMPVNGD 355
Query: 351 DGFFPTTGNELKPEVVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKI 410
DGFFPT+GNELKPEVV S+R+YRVRVLVCAPSNSALDEIVLR+ NTG+RDEN YTPKI
Sbjct: 356 DGFFPTSGNELKPEVVKSNRKYRVRVLVCAPSNSALDEIVLRVQNTGVRDENDHPYTPKI 415
Query: 411 VRIGLKAHHSVNSVAIDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLS 470
VRIGLK H S+ +V++ LVEQK+++ + K+K GA+ D DSIRSAIL+E+VIV STLS
Sbjct: 416 VRIGLKPHPSIKAVSMKELVEQKKNNMSMGKEKSGASGTDLDSIRSAILDESVIVFSTLS 475
Query: 471 FSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAE 530
FSGS+L SK N GFDVVIIDEAAQAVE ATLVPLA GCKQVFLVGDP QLPATVIS A+
Sbjct: 476 FSGSSLFSKWNRGFDVVIIDEAAQAVELATLVPLANGCKQVFLVGDPEQLPATVISTTAK 535
Query: 531 HLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWH 590
GY SLFKR Q AGYPV MLK QYRMHPE+RSFPSREFY E+LED DV+ TTR WH
Sbjct: 536 KFGYDKSLFKRFQTAGYPVTMLKIQYRMHPEIRSFPSREFYAESLEDAQDVKLRTTRAWH 595
Query: 591 EYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIIS 650
YRC+GPF FFD+HEGKESQP GSGSW+NIDE DFVL L+HKL+ YP+LKS+SQ+AIIS
Sbjct: 596 AYRCYGPFCFFDLHEGKESQPPGSGSWVNIDEADFVLHLYHKLVISYPELKSNSQVAIIS 655
Query: 651 PYRHQVKQFQERFKETFGVESQ---KVVDITTVDG-------CQGREKDVAIFSCVRASD 700
PY QVK QE+F + FG++ +++ + ++ QGREKD+AIFSCVRAS+
Sbjct: 656 PYSQQVKLLQEKFVDLFGMDPSDPLRMLKLGILEMNALCLILLQGREKDIAIFSCVRASE 715
Query: 701 KKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRVSKPYA 760
+SIGFL+D RRMNVGITRA++SILVVG ASTL+ D+HWNNLV+SA+K+DCLF+VSKPY
Sbjct: 716 NRSIGFLSDCRRMNVGITRARASILVVGSASTLKRDEHWNNLVESAQKRDCLFKVSKPYT 775
Query: 761 SFFSDENLESMR-KNATTDNVQGADGHVPHDDETMHYA----NTGDADQGQADDIDNADG 815
+F +DE++ESMR KN + G + DET A N GDADQ QADD D DG
Sbjct: 776 TFLNDESVESMRVKN------EPPVGPMGEKDETEANAQQEPNAGDADQAQADDNDFGDG 829
Query: 816 DAEMYDA 822
D EMY+
Sbjct: 830 DEEMYEG 836
>gi|356528070|ref|XP_003532628.1| PREDICTED: probable helicase DDB_G0274399-like [Glycine max]
Length = 939
Score = 1003 bits (2592), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 518/829 (62%), Positives = 637/829 (76%), Gaps = 20/829 (2%)
Query: 4 DKDKPQDEASIFRFCKIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDD 63
+K+K Q+E+ I RF +IIL WDYF + + KN +K L +VK YKDVDD
Sbjct: 116 EKEKLQEESVIRRFYQIILSWDYF--ALLKESKKLKNKEKKGTAVSTLVKVKQRYKDVDD 173
Query: 64 YLATFEPLLFEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADEVESISP 123
Y+AT+EPL+FEE K+QII++K+EEEV EWKL +V EAD FH E +E ESIS
Sbjct: 174 YIATYEPLVFEEAKSQIIKEKEEEEVTEWKLGVVKSWSEADDFHFIEFPCEINEGESISQ 233
Query: 124 NDLLLLSKEEFKEGSTFPTTYAFALVEHC----QANLLRLRMYLAGEVIHINKDAVKS-Q 178
NDLLLLSKE+F + PT YAFALVEH + LLR+R+YLAGE + N D V+S
Sbjct: 234 NDLLLLSKEKFLDDKRLPTVYAFALVEHVRKFFETRLLRVRLYLAGEFSNFNTDNVQSCP 293
Query: 179 RLLNIHSLITSSVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGS 238
RL N+ S I + E++L+ +K+CSLSTIAREYLA+R++ LP+KDLIL+A ++ G+
Sbjct: 294 RLFNMRSHICET----ERQLYFMKLCSLSTIAREYLAVRTISCLPYKDLILNAVGENFGT 349
Query: 239 QDQSWKIPGLLHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILH 298
+ + WKIP L EY++ N Q EAI GL KAFVLIQGPPGTGKTQTILG+LS ILH
Sbjct: 350 EAEGWKIPIPLKEYVESTFNQYQREAITAGLSSKAFVLIQGPPGTGKTQTILGILSTILH 409
Query: 299 ATPARVHSKGGLREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTG 358
ATP R+HSK E+++GP+LP+ EK HW ASPWL G NPRD++MP DG+DGFFPTTG
Sbjct: 410 ATPTRMHSK--TYELRQGPQLPIEEKQRHWALASPWLNGINPRDSLMPKDGNDGFFPTTG 467
Query: 359 NELKPEVVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAH 418
NELKPE + S+R+YRVRVLVCAPSNSALDEIVLR+ N GI DEN Y PKIVRIGLKAH
Sbjct: 468 NELKPEAITSNRKYRVRVLVCAPSNSALDEIVLRVFNGGIHDENDHVYCPKIVRIGLKAH 527
Query: 419 HSVNSVAIDHLVEQKR---DDSAADKQ-KHGATRKDRDSIRSAILNEAVIVCSTLSFSGS 474
HS+ +V++D L++QKR + S+ +KQ +G + DS+R+AIL+EA IV STLSFSGS
Sbjct: 528 HSIKAVSLDELMKQKRSSANKSSTNKQSNNGPAGSNDDSLRAAILDEATIVFSTLSFSGS 587
Query: 475 ALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGY 534
+ SKLN FDVVIIDEAAQAVEPATLVPLA CK+VFLVGDP QLPATVIS VA++ GY
Sbjct: 588 HVFSKLNRSFDVVIIDEAAQAVEPATLVPLANQCKKVFLVGDPAQLPATVISDVAKNHGY 647
Query: 535 GTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRC 594
GTSLF+RL++AGYPVKMLKTQYRMHPE+RSFPSREFY+++LEDG +V+ T R WH+YRC
Sbjct: 648 GTSLFERLKQAGYPVKMLKTQYRMHPEIRSFPSREFYEDSLEDGDEVKSRTIRAWHDYRC 707
Query: 595 FGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRH 654
FGPF FFDIHEGKE++P GSGSWIN++EVDFVL L+ KLIS+YP LKS +Q+AIISPY
Sbjct: 708 FGPFCFFDIHEGKEARPPGSGSWINVEEVDFVLFLYQKLISLYPTLKSGNQVAIISPYSQ 767
Query: 655 QVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMN 714
QVK FQ+RF+ETFG+ ++KVVDI TVDGCQGREKD+AIFSCVRAS K IGF+ D RRMN
Sbjct: 768 QVKLFQKRFEETFGMSAEKVVDICTVDGCQGREKDIAIFSCVRASKDKGIGFVEDIRRMN 827
Query: 715 VGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRVSKPYASFFSDENLESMR-K 773
VGITRAKS++LVVG ASTLR + WN LV+SAEK++CLF+VS+PY+SFFSDE+L SM+ K
Sbjct: 828 VGITRAKSAVLVVGSASTLRRSEQWNKLVESAEKRNCLFKVSQPYSSFFSDESLTSMQTK 887
Query: 774 NATTDNVQGADGHVPHDDETMHYANTGDADQGQADDIDNADGDAEMYDA 822
A V G D V +D + + A DA Q Q +D D+ +GD +M DA
Sbjct: 888 VAEPSQVTGPDDMVDNDVQPDN-AAAFDA-QAQTEDNDDGEGDIDMNDA 934
>gi|357488337|ref|XP_003614456.1| Helicase sen1 [Medicago truncatula]
gi|355515791|gb|AES97414.1| Helicase sen1 [Medicago truncatula]
Length = 853
Score = 971 bits (2510), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 496/840 (59%), Positives = 611/840 (72%), Gaps = 47/840 (5%)
Query: 1 MAVDKDKPQDEASIFRFCKIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKD 60
MA+DK+K ++E++I RF KIIL WDY L E+Q RN+ + L +VK+ YKD
Sbjct: 1 MALDKEKLEEESAIHRFYKIILAWDYVTLDSENQRRNNGKATTSK-----LVKVKNQYKD 55
Query: 61 VDDYLATFEPLLFEEVKAQIIQKKDEEEVQEWKLRLV---------MECGEADGFHLPSV 111
V DY T+EPL+ EE K+QII+ KDE+E EWKL V + D FH
Sbjct: 56 VQDYENTYEPLILEEAKSQIIRGKDEDEGAEWKLGAVPNRDNNKSDQSHNKPDDFHFLEF 115
Query: 112 TYEADEVESISPNDLLLLSKEEFKEGSTFPTTYAFALVEHC----QANLLRLRMYLAGEV 167
++ +E ESIS NDL+L+S EE +T T+AFALVE+ + +LR+R+YL G+
Sbjct: 116 PFDMEEGESISQNDLILISNEERVHDNT---THAFALVENVRKFSEPKVLRVRLYLPGDN 172
Query: 168 IHINKDAVKSQRLLNIHSLITSSVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDL 227
+ RL + S I S L +++C+LSTIAREY+A+R++ +LPFKDL
Sbjct: 173 LE--------SRLFKMRSHI----SVEGNPLHFMRMCNLSTIAREYVAIRTISNLPFKDL 220
Query: 228 ILSASEKSSGSQDQSWKIPGLLHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQ 287
IL+A + S+ + WKIP L EY+ ++ N Q EAI GLL K FVLIQGPPGTGKTQ
Sbjct: 221 ILNAVGEDFSSEAEGWKIPLCLDEYVNDSFNPYQREAITAGLLSKTFVLIQGPPGTGKTQ 280
Query: 288 TILGLLSAILHATPARVHSKGGLREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPI 347
TILG+LS ILHATP RV SK G E+K+ P+LP+ EK HW ASPWL G NPRD++MP
Sbjct: 281 TILGILSTILHATPMRVQSKNGTFELKQVPQLPIEEKQRHWRLASPWLHGINPRDSLMPK 340
Query: 348 DGDDGFFPTTGNELKPEVVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYT 407
DGDDGFFPTTGNELKPE V S+R+YRVR+LVCAPSNSALDEIVLR+L+ GI DEN R+Y
Sbjct: 341 DGDDGFFPTTGNELKPEAVTSTRKYRVRILVCAPSNSALDEIVLRVLSGGIHDENNRAYC 400
Query: 408 PKIVRIGLKAHHSVNSVAIDHLVEQKR---DDSAADKQKHGATRKDRDSIRSAILNEAVI 464
PKIVRIGLKAHHS+ +V++D LV++KR + S+ KQ + + + DSIR+AIL+EA I
Sbjct: 401 PKIVRIGLKAHHSIKAVSLDELVKKKRASANISSTGKQNNASAGSNDDSIRAAILDEATI 460
Query: 465 VCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATV 524
V STLSFSGS + SKL+ FDVVIIDEAAQAVEPATLVPLA CK+VFLVGDP QLPATV
Sbjct: 461 VFSTLSFSGSHVFSKLSRNFDVVIIDEAAQAVEPATLVPLANKCKKVFLVGDPAQLPATV 520
Query: 525 ISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDY 584
IS +A + GYGTSLF+RL +AGYP+KMLKTQYRMHPE+RSFPS EFY+ +LEDG V+
Sbjct: 521 ISDIATNHGYGTSLFERLMQAGYPIKMLKTQYRMHPEIRSFPSMEFYNNSLEDGEGVKIQ 580
Query: 585 TTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSS 644
T RDWH YRCFGPFSFFDIHEGKE++P+GSGSW+N++EVDFVLLL+ KL+S+YP LKS +
Sbjct: 581 TERDWHRYRCFGPFSFFDIHEGKEARPSGSGSWVNVEEVDFVLLLYQKLVSLYPTLKSGN 640
Query: 645 QLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSI 704
Q+AIISPY+ QV FQ+RF+ETFGV ++K+VDI TVDGCQGREKDVAIFSCVRAS + I
Sbjct: 641 QVAIISPYKAQVNLFQQRFEETFGVSAEKLVDICTVDGCQGREKDVAIFSCVRASKEGGI 700
Query: 705 GFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRVSKPYASFFS 764
GFL D RRMNVGITRAKS++LVVG ASTLR WN LV+SAEK+DC F+ SKPY SF S
Sbjct: 701 GFLDDIRRMNVGITRAKSAVLVVGSASTLRRSVQWNKLVESAEKRDCFFKASKPYPSFLS 760
Query: 765 DENLESMRKNA-----TTDNVQGADGHVPHDDETMHYANTGDADQGQADDIDNADGDAEM 819
ENLESM++ T++ G D+ H Q QADD D DGDA+M
Sbjct: 761 VENLESMKRKTDEPPKETESADGVSNDARMDNVAEHTY------QEQADDNDYGDGDADM 814
>gi|242038133|ref|XP_002466461.1| hypothetical protein SORBIDRAFT_01g008150 [Sorghum bicolor]
gi|241920315|gb|EER93459.1| hypothetical protein SORBIDRAFT_01g008150 [Sorghum bicolor]
Length = 818
Score = 912 bits (2357), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/766 (59%), Positives = 582/766 (75%), Gaps = 29/766 (3%)
Query: 16 RFCKIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEE 75
RF KI+L WDY RLV ES + K +K + R VK+TY V +YL FEPLLFEE
Sbjct: 18 RFQKIVLSWDYLRLVTES--KGGKQAKVLQR-------VKNTYDSVAEYLGVFEPLLFEE 68
Query: 76 VKAQIIQKKDEEEVQ---EWKLRLVMECGEADGFHLPSVTYEADEVESISPNDLLLLSKE 132
VKAQIIQ + +EE + +W+ V C E++GFH SV E +++S NDLLLLSKE
Sbjct: 69 VKAQIIQGRSDEEEESGMDWRRGAVGSCTESEGFHKLSVAVEDSFQDNVSENDLLLLSKE 128
Query: 133 EFKEGSTFPTTYAFALVEHCQANL-LRLRMYLAGEVIHIN-KDAVKSQRLLNIHSLITSS 190
+F+EGST P YAFALVE L + LR ++AGE++++N VKS RL + S I S
Sbjct: 129 KFEEGST-PNAYAFALVEQRGGGLHISLRTFVAGEIVNLNVAKPVKSTRLQHFASTIASQ 187
Query: 191 VSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQS--WKIPGL 248
S L+ LK+CSLSTI RE+ A+ SV S+PFKDLILSA+EK DQS W +P
Sbjct: 188 NSL----LWILKVCSLSTIMREFTAMHSVASIPFKDLILSATEKHKDGDDQSRAWNVPEP 243
Query: 249 LHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKG 308
L +Y+K N N SQLEA++ GL R++FVLIQGPPGTGKTQTILGLLSA+LH+ PAR+ KG
Sbjct: 244 LMDYLKTNLNNSQLEAVNAGLSRRSFVLIQGPPGTGKTQTILGLLSAVLHSAPARMQIKG 303
Query: 309 GLREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNS 368
G +K GPEL + K HW +ASPWL+GANPRD IMP+DGDDGF+PT GNELKPEVV+S
Sbjct: 304 GFDVLKHGPELDIDGKRAHWMKASPWLLGANPRDLIMPVDGDDGFYPT-GNELKPEVVSS 362
Query: 369 SRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDH 428
+R+YR VLVCAPSNSALDEIVLR+L TGIRDEN +Y PKIVRIG+KA HSV +V++D+
Sbjct: 363 NRKYRAHVLVCAPSNSALDEIVLRVLKTGIRDENNNTYNPKIVRIGVKALHSVKAVSMDY 422
Query: 429 LVEQKRD--DSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDV 486
L++QK D D + GA DR IR++IL+EA IV STLSFSGS++ S+++ FDV
Sbjct: 423 LIQQKLSGVDRTLDGGRRGAGEYDR--IRASILDEAAIVFSTLSFSGSSIFSRMSRAFDV 480
Query: 487 VIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAG 546
VIIDEAAQAVEPATL+PL GC+Q+FLVGDPVQLPATVIS A+ LGYGTSLFKR Q AG
Sbjct: 481 VIIDEAAQAVEPATLIPLVHGCRQIFLVGDPVQLPATVISQTAQKLGYGTSLFKRFQAAG 540
Query: 547 YPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEG 606
+PV+MLK QYRMHPE+ FPS+EFY+ L+DG + R WH Y CFGPF FFD+ +G
Sbjct: 541 FPVQMLKIQYRMHPEISMFPSKEFYEGVLQDGEGLS--RKRPWHSYSCFGPFCFFDV-DG 597
Query: 607 KESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKET 666
ESQP+GSGSW+N DEV+F+ LL+H+L YP+LKSS ++ +ISPYRHQVK ++ F+ T
Sbjct: 598 IESQPSGSGSWVNQDEVEFITLLYHQLAMRYPELKSSPEVGVISPYRHQVKLLKDSFRST 657
Query: 667 FGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILV 726
FG +S++++D++TVDG QGREK++ IFSCVR ++++ IGF++D+RRMNV ITRAKS++LV
Sbjct: 658 FGDQSKELIDVSTVDGFQGREKEIVIFSCVRCNEEQKIGFVSDFRRMNVAITRAKSAVLV 717
Query: 727 VGCASTLREDKHWNNLVKSAEKQDCLFRVSKPYASFFSDENLESMR 772
VG ASTL++DKHWNNLV+SA++++ F+V KP+ +FF ++NL++M+
Sbjct: 718 VGSASTLKQDKHWNNLVESAKERNRFFKVPKPFTTFFGEDNLKAMK 763
>gi|222628874|gb|EEE61006.1| hypothetical protein OsJ_14821 [Oryza sativa Japonica Group]
Length = 848
Score = 909 bits (2348), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 472/833 (56%), Positives = 597/833 (71%), Gaps = 53/833 (6%)
Query: 16 RFCKIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEE 75
RF KI+L WDY RLV +S+ + GL VK+TY V +YLA FEPLLFEE
Sbjct: 29 RFHKIVLSWDYVRLVADSKGGQQQAK--------GLGRVKNTYASVAEYLAVFEPLLFEE 80
Query: 76 VKAQIIQKKDEEEV---QEWKLRLVMECGEADGFHLPSVTYEADEVESISPNDLLLLSKE 132
VKAQI+Q + +EE Q+W+ +V C E++GFH S+ D E +S NDLLLLSKE
Sbjct: 81 VKAQIVQGRSDEEEEAGQDWQKGIVASCTESEGFHKVSMAVLDDFREMVSENDLLLLSKE 140
Query: 133 EFKEGSTFPTTYAFALVEHCQA-NLLRLRMYLAGEVIHIN-KDAVKSQRLLNIHSLITSS 190
+F+EG T P+ YAFALVE + LR ++AGE+ ++N V RL I S+ +++
Sbjct: 141 KFEEGVT-PSAYAFALVEQRGGRETISLRTFVAGEIKNLNVAKPVSCSRLQRIASIFSTT 199
Query: 191 VSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQ--SWKIPGL 248
E L+ LKICSLSTI RE+ + SV SLPFKDLILSASEK+SG DQ +W +P
Sbjct: 200 ----ESFLWILKICSLSTIMREFSGMHSVASLPFKDLILSASEKNSGGNDQNRAWNVPEP 255
Query: 249 LHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKG 308
L +Y+K N N SQL+A++ GL R++FVLIQGPPGTGKTQTILGLLSA+LH+ PAR+ +KG
Sbjct: 256 LMDYLKTNLNDSQLDAVNAGLSRRSFVLIQGPPGTGKTQTILGLLSAVLHSAPARMQTKG 315
Query: 309 GLREIKRGPELPMH-------------------EKYNHWGRASPWLVGANPRDNIMPIDG 349
G K GPEL + +++ HW +ASPWL+G NPRD IMP+DG
Sbjct: 316 GFDVKKHGPELDIEGNSLWCLEITNSPYFMSSCDRHAHWMKASPWLIGVNPRDLIMPVDG 375
Query: 350 DDGFFPTTGNELKPEVVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPK 409
DDGF+PT GNELKPEVV+S+R+YR VLVCAPSNSALDEIVLR+L TGIRDEN +Y PK
Sbjct: 376 DDGFYPT-GNELKPEVVSSNRKYRAHVLVCAPSNSALDEIVLRVLQTGIRDENNNTYNPK 434
Query: 410 IVRIGLKAHHSVNSVAIDHLVEQKRD--DSAADKQKHGATRKDRDSIRSAILNEAVIVCS 467
IVRIGLKAHHSV +V++D+L++QK D ++D + GA DR IRS+IL+EA IV S
Sbjct: 435 IVRIGLKAHHSVKAVSMDYLIQQKLSGVDRSSDGGRRGAGEYDR--IRSSILDEAAIVFS 492
Query: 468 TLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISP 527
TLSFSGS++ S++ FDVVIIDEAAQAVEPATL+PL GCKQVFLVGDPVQLPATVIS
Sbjct: 493 TLSFSGSSIFSRMARAFDVVIIDEAAQAVEPATLIPLIHGCKQVFLVGDPVQLPATVISS 552
Query: 528 VAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR 587
A+ LGYGTSLFKR Q AG+PV+MLK QYRMHPE+ FPS+EFY+ LEDG + R
Sbjct: 553 TAQKLGYGTSLFKRFQAAGFPVQMLKIQYRMHPEISIFPSKEFYEGVLEDGEGLS--KKR 610
Query: 588 DWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLA 647
WH Y CFGPF FFD+ +G ESQP+GSGSW+N DEV+F+ LL+H++ YP+LKSSSQ+A
Sbjct: 611 PWHSYSCFGPFCFFDV-DGTESQPSGSGSWVNEDEVEFITLLYHQMAMRYPELKSSSQVA 669
Query: 648 IISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFL 707
+ISPYRHQVK ++ F+ TFG +S++V+D+ TVDG QGREK+V IFSCVR + ++ IGF+
Sbjct: 670 VISPYRHQVKLLKDHFRSTFGDQSKEVIDVNTVDGFQGREKEVVIFSCVRCNKEQKIGFV 729
Query: 708 ADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRVSKPYASFFSDEN 767
+D+RRMNV ITRA+S++LVVG ASTL+EDKHWNNLV+SA+++ F+V KP+ +FF D+
Sbjct: 730 SDFRRMNVAITRARSAVLVVGSASTLKEDKHWNNLVESAKERGRYFQVPKPFTAFFVDDK 789
Query: 768 LESM---RKNATTDNVQG--ADGHVPHDDETMHYANTGDA-DQGQADDIDNAD 814
L++M R VQ A E M + GD D+G DD AD
Sbjct: 790 LKTMKVERAPPELRTVQALEAINEAVVGQELMDVDDAGDQEDEGYDDDPVEAD 842
>gi|218194850|gb|EEC77277.1| hypothetical protein OsI_15909 [Oryza sativa Indica Group]
Length = 980
Score = 907 bits (2345), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 473/833 (56%), Positives = 599/833 (71%), Gaps = 53/833 (6%)
Query: 16 RFCKIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEE 75
RF KI+L WDY RLV +S+ + + K GL VK+TY V +YLA FEPLLFEE
Sbjct: 161 RFHKIVLSWDYVRLVADSK-------GGLQQAK-GLGRVKNTYASVAEYLAVFEPLLFEE 212
Query: 76 VKAQIIQKKDEEEV---QEWKLRLVMECGEADGFHLPSVTYEADEVESISPNDLLLLSKE 132
VKAQI+Q + +EE Q+W+ +V C E++GFH S+ D E +S NDLLLLSKE
Sbjct: 213 VKAQIVQGRSDEEEEAGQDWQKGIVASCTESEGFHKVSMAVLDDFREMVSENDLLLLSKE 272
Query: 133 EFKEGSTFPTTYAFALVEHCQAN-LLRLRMYLAGEVIHIN-KDAVKSQRLLNIHSLITSS 190
+F+EG T P+ YAFALVE + LR ++AGE+ ++N V RL I S+ +++
Sbjct: 273 KFEEGVT-PSAYAFALVEQRGGRETISLRTFVAGEIKNLNVAKPVSCSRLQRIASIFSTT 331
Query: 191 VSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQ--SWKIPGL 248
E L+ LKICSLSTI RE+ + SV SLPFKDLILSASEK+SG DQ +W +P
Sbjct: 332 ----ESFLWILKICSLSTIMREFSGMHSVASLPFKDLILSASEKNSGGNDQNRAWNVPEP 387
Query: 249 LHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKG 308
L +Y+K N N SQL+A++ GL R++FVLIQGPPGTGKTQTILGLLSA+LH+ PAR+ +KG
Sbjct: 388 LMDYLKTNLNDSQLDAVNAGLSRRSFVLIQGPPGTGKTQTILGLLSAVLHSAPARMQTKG 447
Query: 309 GLREIKRGPELPMH-------------------EKYNHWGRASPWLVGANPRDNIMPIDG 349
G K GPEL + +++ HW +ASPWL+G NPRD IMP+DG
Sbjct: 448 GFDVKKHGPELDIEGNSLWCLEITNSPYFMSSCDRHAHWMKASPWLIGVNPRDLIMPVDG 507
Query: 350 DDGFFPTTGNELKPEVVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPK 409
DDGF+PT GNELKPEVV+S+R+YR VLVCAPSNSALDEIVLR+L TGIRDEN +Y PK
Sbjct: 508 DDGFYPT-GNELKPEVVSSNRKYRAHVLVCAPSNSALDEIVLRVLQTGIRDENNNTYNPK 566
Query: 410 IVRIGLKAHHSVNSVAIDHLVEQKRD--DSAADKQKHGATRKDRDSIRSAILNEAVIVCS 467
IVRIGLKAHHSV +V++D+L++QK D ++D + GA DR IRS+IL+EA IV S
Sbjct: 567 IVRIGLKAHHSVKAVSMDYLIQQKLSGVDRSSDGGRRGAGEYDR--IRSSILDEAAIVFS 624
Query: 468 TLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISP 527
TLSFSGS++ S++ FDVVIIDEAAQAVEPATL+PL GCKQVFLVGDPVQLPATVIS
Sbjct: 625 TLSFSGSSIFSRMARAFDVVIIDEAAQAVEPATLIPLIHGCKQVFLVGDPVQLPATVISS 684
Query: 528 VAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR 587
A+ LGYGTSLFKR Q AG+PV+MLK QYRMHPE+ FPS+EFY+ LEDG + R
Sbjct: 685 TAQKLGYGTSLFKRFQAAGFPVQMLKIQYRMHPEISIFPSKEFYEGVLEDGEGLS--KKR 742
Query: 588 DWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLA 647
WH Y CFGPF FFD+ +G ESQP+GSGSW+N DEV+F+ LL+H++ YP+LKSSSQ+A
Sbjct: 743 PWHSYSCFGPFCFFDV-DGTESQPSGSGSWVNEDEVEFITLLYHQMAMRYPELKSSSQVA 801
Query: 648 IISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFL 707
+ISPYRHQVK ++ F+ TFG +S++V+D+ TVDG QGREK+V IFSCVR + ++ IGF+
Sbjct: 802 VISPYRHQVKLLKDHFRSTFGDQSKEVIDVNTVDGFQGREKEVVIFSCVRCNKEQKIGFV 861
Query: 708 ADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRVSKPYASFFSDEN 767
+D+RRMNV ITRA+S++LVVG ASTL+EDKHWNNLV+SA+++ F+V KP+ +FF D+
Sbjct: 862 SDFRRMNVAITRARSAVLVVGSASTLKEDKHWNNLVESAKERGRYFQVPKPFTAFFVDDK 921
Query: 768 LESM---RKNATTDNVQG--ADGHVPHDDETMHYANTGDA-DQGQADDIDNAD 814
L++M R VQ A E M + GD D+G DD AD
Sbjct: 922 LKTMKVERAPPELRTVQALEAINEAVVGQELMDVDDAGDQEDEGYDDDPVEAD 974
>gi|357163471|ref|XP_003579742.1| PREDICTED: probable helicase DDB_G0274399-like isoform 2
[Brachypodium distachyon]
Length = 820
Score = 900 bits (2327), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/766 (59%), Positives = 583/766 (76%), Gaps = 29/766 (3%)
Query: 16 RFCKIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEE 75
RF KI+L WDY RLV +SK D+ K GL+ VK+TY V +YL FEPLLFEE
Sbjct: 22 RFFKIVLSWDYLRLVA--------DSKGADKTK-GLQRVKNTYTSVAEYLGVFEPLLFEE 72
Query: 76 VKAQIIQKK--DEEEVQ-EWKLRLVMECGEADGFHLPSVTYEADEVESISPNDLLLLSKE 132
VKAQI+Q + +EEE+ +W+ LV E++GFH + E +S NDLLLLSKE
Sbjct: 73 VKAQIVQGRSGEEEEIGLDWQKGLVGTYTESEGFHKVQMAVVDCFQEIVSENDLLLLSKE 132
Query: 133 EFKEGSTFPTTYAFALVEHCQA-NLLRLRMYLAGEVIHIN-KDAVKSQRLLNIHSLITSS 190
+F+EG T PT YAFA+VE + LR ++ GE+ +++ VKS RL I S+ ++
Sbjct: 133 KFEEGVT-PTAYAFAVVEQRGGKGPVSLRTFVEGEIKNLDIAKPVKSSRLQRIASIFATN 191
Query: 191 VSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQ--SWKIPGL 248
+ L+ LK+CSLSTI REY A++SV SLPFKDLILSASEK+ DQ +W +P
Sbjct: 192 ----GQVLWILKMCSLSTILREYSAMQSVASLPFKDLILSASEKNKDGDDQNRAWNVPEP 247
Query: 249 LHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKG 308
L +Y+K N N SQL+A++ GL R++FVLIQGPPGTGKTQTILGLLSA+LH+ PARV +KG
Sbjct: 248 LMDYLKTNLNDSQLDAVNAGLSRRSFVLIQGPPGTGKTQTILGLLSAVLHSAPARVQTKG 307
Query: 309 GLREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNS 368
G K GPEL + K+ HW +ASPWL+GANPRD IMP+DGDDGF+PT GNELKPEV++S
Sbjct: 308 GFDVEKHGPELDIEGKHTHWMKASPWLIGANPRDLIMPVDGDDGFYPT-GNELKPEVISS 366
Query: 369 SRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDH 428
+R+YR VLVCAPSNSALDEIV R+L TGIRDEN +Y+PKIVRIGLKAHHSV +V++D+
Sbjct: 367 NRKYRAHVLVCAPSNSALDEIVSRVLQTGIRDENNNTYSPKIVRIGLKAHHSVKAVSMDY 426
Query: 429 LVEQKRD--DSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDV 486
L++QK D ++D + GA DR IR+++L+EA IV STLSFSGS + S++ FDV
Sbjct: 427 LIQQKLSGVDRSSDGGRRGAGEYDR--IRASVLDEAAIVFSTLSFSGSTVFSRMTRSFDV 484
Query: 487 VIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAG 546
VIIDEAAQAVEPATLVPL GC+QVFLVGDPVQLPATVIS A+ LGYGTSLFKR Q AG
Sbjct: 485 VIIDEAAQAVEPATLVPLVHGCRQVFLVGDPVQLPATVISSTAQKLGYGTSLFKRFQAAG 544
Query: 547 YPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEG 606
+PV+MLK QYRMHPE+ FPS+EFY+ L+DG + R WH Y CFGPF FFDI +G
Sbjct: 545 FPVQMLKIQYRMHPEISIFPSKEFYEGILQDGEGLNK--KRPWHSYSCFGPFCFFDI-DG 601
Query: 607 KESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKET 666
ESQP+GSGSW+N DEV+F+ L++H+L + YP+LKSSSQ+A+ISPY QVK ++RF+ T
Sbjct: 602 IESQPSGSGSWVNEDEVEFITLIYHQLATHYPELKSSSQVAVISPYSLQVKLLKDRFRST 661
Query: 667 FGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILV 726
FG +S++V+D+ TVDG QGREK+V IFSCVR + +++IGF++D+RRMNV ITRA+S++LV
Sbjct: 662 FGDQSKEVIDVNTVDGFQGREKEVVIFSCVRCNKEQNIGFVSDFRRMNVAITRARSAVLV 721
Query: 727 VGCASTLREDKHWNNLVKSAEKQDCLFRVSKPYASFFSDENLESMR 772
+G ASTL++DKHWNNLV+SA+++D F VSKP+ +FF+++ ++M+
Sbjct: 722 IGSASTLKQDKHWNNLVESAKERDRFFTVSKPFTTFFAEDKFKTMK 767
>gi|326488401|dbj|BAJ93869.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 830
Score = 886 bits (2290), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/814 (55%), Positives = 594/814 (72%), Gaps = 39/814 (4%)
Query: 16 RFCKIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEE 75
RF KI+L WDY R+V S K D+ K GLREVK++Y VD+YL FEPLLFEE
Sbjct: 26 RFLKIVLSWDYLRIVAAS--------KGADKAK-GLREVKNSYASVDEYLGVFEPLLFEE 76
Query: 76 VKAQIIQKK------DEEEVQ-EWKLRLVMECGEADGFHLPS--VTYEADEVESISPNDL 126
VKAQI+Q + +E+E++ +W+ V C E++GFH S V+ ++ S+S NDL
Sbjct: 77 VKAQILQGRRNDGEGEEDEIKLDWQRGAVRTCAESEGFHKLSMLVSDGLRDIVSLSENDL 136
Query: 127 LLLSKEEFKEGSTFPTTYAFALVEHCQA-NLLRLRMYLAGEVIHIN-KDAVKSQRLLNIH 184
LLLSKE+F+EG PT YAFA+VE + L LR ++AGE+ ++N VKS RL
Sbjct: 137 LLLSKEKFEEGVN-PTAYAFAVVEQRGGKDTLSLRTFVAGEIRNLNVAQPVKSLRLQRFA 195
Query: 185 SLITSSVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQ--S 242
S++ S + L+ LK+CSLSTI REY + SV S PFKDLILSASE + DQ +
Sbjct: 196 SIL----SKPDSFLWILKMCSLSTILREYSGMHSVASHPFKDLILSASENNRDGDDQNRA 251
Query: 243 WKIPGLLHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPA 302
W +P L +Y+K N N SQL+A++ GL R++FVLIQGPPGTGKTQTILGLLSA+LH+ PA
Sbjct: 252 WNVPQPLMDYLKANLNGSQLDAVNAGLSRRSFVLIQGPPGTGKTQTILGLLSAVLHSAPA 311
Query: 303 RVHSKGGLREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELK 362
R+ ++GG K GPEL + K+ +W +ASPWL+GANPRD IMP+DGDDGF+PT GN+LK
Sbjct: 312 RMQTRGGFDVQKHGPELDIESKHANWMKASPWLIGANPRDMIMPVDGDDGFYPT-GNDLK 370
Query: 363 PEVVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVN 422
PEVV+S+R+YR VLVCAPSNSALDEIVLR+L TGIRDEN +Y PKIVRIGLKAHHSV
Sbjct: 371 PEVVSSNRKYRAHVLVCAPSNSALDEIVLRVLQTGIRDENNNTYNPKIVRIGLKAHHSVK 430
Query: 423 SVAIDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNH 482
+V++D+L++QK+ A+D + GA +DR +R+++L+EA IV STLSFSGSA+ +++
Sbjct: 431 AVSMDYLMDQKQSGVASDGGRPGAGERDR--LRASLLDEAAIVFSTLSFSGSAIFTRMTR 488
Query: 483 GFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRL 542
FDVVIIDEAAQA+EPATLVPL GC+QVFLVGDPVQLPATVIS A LGYG SLF+R
Sbjct: 489 AFDVVIIDEAAQAIEPATLVPLVHGCRQVFLVGDPVQLPATVISTTARKLGYGRSLFQRF 548
Query: 543 QRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFD 602
Q AG+PV+MLK QYRMHPE+ FPS+EFY+ LEDG ++ R WH Y CFGPF FFD
Sbjct: 549 QAAGFPVQMLKIQYRMHPEISVFPSKEFYEGILEDGEGLD--KKRPWHSYSCFGPFCFFD 606
Query: 603 IHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQER 662
+ +G ES +GSGS +N DEV+F+ LL+H+L + YP+LKSSSQ+A+ISPYR QVK +
Sbjct: 607 V-DGVESHLSGSGSMVNEDEVEFITLLYHQLATRYPELKSSSQVAVISPYRGQVKLLTDH 665
Query: 663 FKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKS 722
F+ TFG +S++V+D+ TVDG QGREK++ IFSCVR + ++SIGF++D+RRMNV ITRA+S
Sbjct: 666 FRSTFGDQSKEVIDVNTVDGFQGREKELVIFSCVRCNKEQSIGFVSDFRRMNVAITRARS 725
Query: 723 SILVVGCASTLREDKHWNNLVKSAEKQDCLFRVSKPYASFFSDENLESMR-----KNATT 777
++LV+G +ST ++DKHW NLV+SA++++ F+V KP+ +FF+++N ++M+ +A
Sbjct: 726 AVLVIGSSSTFKKDKHWTNLVESAKERNRYFKVPKPFTAFFAEDNFKTMKVERPVPDARI 785
Query: 778 DNVQGADGHVPHDDETMHYANTGDADQGQADDID 811
A V E M + GD Q DD D
Sbjct: 786 SEAIEAINEVVARQEVMDGDDAGD-HQADGDDYD 818
>gi|297723147|ref|NP_001173937.1| Os04g0424200 [Oryza sativa Japonica Group]
gi|255675460|dbj|BAH92665.1| Os04g0424200 [Oryza sativa Japonica Group]
Length = 836
Score = 881 bits (2276), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/821 (56%), Positives = 584/821 (71%), Gaps = 52/821 (6%)
Query: 16 RFCKIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEE 75
RF KI+L WDYFRLV +S+ + GL VK+TY V +YLA FEPLLFEE
Sbjct: 29 RFHKIVLSWDYFRLVADSKGGQQQAK--------GLGRVKNTYASVAEYLAVFEPLLFEE 80
Query: 76 VKAQIIQKKDEEEV---QEWKLRLVMECGEADGFHLPSVTYEADEVESISPNDLLLLSKE 132
VKAQI+Q + +EE Q+W+ +V C E++GFH S+ D E +S NDLLLLSKE
Sbjct: 81 VKAQIVQGRSDEEEEAGQDWQKGIVASCTESEGFHKVSMAVLDDFREMVSENDLLLLSKE 140
Query: 133 EFKEGSTFPTTYAFALVEHCQA-NLLRLRMYLAGEVIHIN-KDAVKSQRLLNIHSLITSS 190
+F+EG T P+ YAFALVE + LR ++AGE+ ++N V RL I S+ +++
Sbjct: 141 KFEEGVT-PSAYAFALVEQRGGRETISLRTFVAGEIKNLNVAKPVSCSRLQRIASIFSTT 199
Query: 191 VSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQ--SWKIPGL 248
E L+ LKICSLSTI RE+ + SV SLPFKDLILSASEK+SG DQ +W +P
Sbjct: 200 ----ESFLWILKICSLSTIMREFSGMHSVASLPFKDLILSASEKNSGGNDQNRAWNVPEP 255
Query: 249 LHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKG 308
L +Y+K N N SQL+A++ GL R++FVLIQGPPGTGKTQTILGLLSA+LH+ PAR+ +KG
Sbjct: 256 LMDYLKTNLNDSQLDAVNAGLSRRSFVLIQGPPGTGKTQTILGLLSAVLHSAPARMQTKG 315
Query: 309 GLREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNS 368
G K GPEL + K+ HW +ASPWL+G NPRD IMP+DGDDGF+PT GNELKPEVV+S
Sbjct: 316 GFDVKKHGPELDIEGKHAHWMKASPWLIGVNPRDLIMPVDGDDGFYPT-GNELKPEVVSS 374
Query: 369 SRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDH 428
+R+YR VLVCAPSNSALDEIVLR+L GIRDEN +Y PKIVRIGLKAHHSV +V++D+
Sbjct: 375 NRKYRAHVLVCAPSNSALDEIVLRVLQIGIRDENNNTYNPKIVRIGLKAHHSVKAVSMDY 434
Query: 429 LVEQKRD--DSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDV 486
L++QK D ++D + GA DR IRS+IL+EA IV STLSFSGS++ S++ FDV
Sbjct: 435 LIQQKLSGVDRSSDGGRRGAGEYDR--IRSSILDEAAIVFSTLSFSGSSIFSRMARAFDV 492
Query: 487 VIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAG 546
VIIDEAAQAV GDPVQLPATVIS A+ LGYGTSLFKR Q AG
Sbjct: 493 VIIDEAAQAV------------------GDPVQLPATVISSTAQKLGYGTSLFKRFQAAG 534
Query: 547 YPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEG 606
+PV+MLK QYRMHPE+ FPS+EFY+ LEDG + R WH Y CFGPF FFD+ +G
Sbjct: 535 FPVQMLKIQYRMHPEISIFPSKEFYEGVLEDGEGLS--KKRPWHSYSCFGPFCFFDV-DG 591
Query: 607 KESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKET 666
ESQP+GSGSW+N DEV+F+ LL+H++ YP+LKSSSQ+A+ISPYRHQVK ++ F+ T
Sbjct: 592 TESQPSGSGSWVNEDEVEFITLLYHQMAMRYPELKSSSQVAVISPYRHQVKLLKDHFRST 651
Query: 667 FGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILV 726
FG +S++V+D+ TVDG QGREK+V IFSCVR + ++ IGF++D+RRMNV ITRA+S++LV
Sbjct: 652 FGDQSKEVIDVNTVDGFQGREKEVVIFSCVRCNKEQKIGFVSDFRRMNVAITRARSAVLV 711
Query: 727 VGCASTLREDKHWNNLVKSAEKQDCLFRVSKPYASFFSDENLESM---RKNATTDNVQG- 782
VG ASTL+EDKHWNNLV+SA+++ F+V KP+ +FF D+ L++M R VQ
Sbjct: 712 VGSASTLKEDKHWNNLVESAKERGRYFQVPKPFTAFFVDDKLKTMKVERAPPELRTVQAL 771
Query: 783 -ADGHVPHDDETMHYANTGDA-DQGQADDIDNADGDAEMYD 821
A E M + GD D+G DD AD + E+ D
Sbjct: 772 EAINEAVVGQELMDVDDAGDQEDEGYDDDPVEADDELEVTD 812
>gi|297605680|ref|NP_001057481.2| Os06g0310200 [Oryza sativa Japonica Group]
gi|255676976|dbj|BAF19395.2| Os06g0310200 [Oryza sativa Japonica Group]
Length = 1029
Score = 874 bits (2258), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/814 (56%), Positives = 580/814 (71%), Gaps = 52/814 (6%)
Query: 16 RFCKIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEE 75
RF KI+L WDY RLV +S+ + GL VK+TY V +YLA FEPLLFEE
Sbjct: 59 RFHKIVLSWDYVRLVADSKGGQQQAK--------GLGRVKNTYASVAEYLAVFEPLLFEE 110
Query: 76 VKAQIIQKKDEEEV---QEWKLRLVMECGEADGFHLPSVTYEADEVESISPNDLLLLSKE 132
VKAQI+Q + +EE Q+W+ +V C E++GFH S+ D E +S NDLLLLSKE
Sbjct: 111 VKAQIVQGRSDEEEEAGQDWQKGIVASCTESEGFHKVSMAVLDDFREMVSENDLLLLSKE 170
Query: 133 EFKEGSTFPTTYAFALVEHCQA-NLLRLRMYLAGEVIHIN-KDAVKSQRLLNIHSLITSS 190
+F+EG T P+ YAFALVE + LR ++AGE+ ++N V RL I S+ +++
Sbjct: 171 KFEEGVT-PSAYAFALVEQRGGRETISLRTFVAGEIKNLNVAKPVSCSRLQRIASIFSTT 229
Query: 191 VSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQ--SWKIPGL 248
E L+ LKICSLSTI RE+ + SV SLPFKDLILSASEK+SG DQ +W +P
Sbjct: 230 ----ESFLWILKICSLSTIMREFSGMHSVASLPFKDLILSASEKNSGGNDQNRAWNVPEP 285
Query: 249 LHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKG 308
L +Y+K N N SQL+A++ GL R++FVLIQGPPGTGKTQTILGLLSA+LH+ PAR+ +KG
Sbjct: 286 LMDYLKTNLNDSQLDAVNAGLSRRSFVLIQGPPGTGKTQTILGLLSAVLHSAPARMQTKG 345
Query: 309 GLREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNS 368
G K GPEL + K+ HW +ASPWL+G NPRD IMP+DGDDGF+PT GNELKPEVV+S
Sbjct: 346 GFDVKKHGPELDIEGKHAHWMKASPWLIGVNPRDLIMPVDGDDGFYPT-GNELKPEVVSS 404
Query: 369 SRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDH 428
+R+YR VLVCAPSNSALDEIVLR+L TGIRDEN +Y PKIVRIGLKAHHSV +V++D+
Sbjct: 405 NRKYRAHVLVCAPSNSALDEIVLRVLQTGIRDENNNTYNPKIVRIGLKAHHSVKAVSMDY 464
Query: 429 LVEQKRD--DSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDV 486
L++QK D ++D + GA DR IRS+IL+EA IV STLSFSGS++ S++ FDV
Sbjct: 465 LIQQKLSGVDRSSDGGRRGAGEYDR--IRSSILDEAAIVFSTLSFSGSSIFSRMARAFDV 522
Query: 487 VIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAG 546
VIIDEAAQAV GDPVQLPATVIS A+ LGYGTSLFKR Q AG
Sbjct: 523 VIIDEAAQAV------------------GDPVQLPATVISSTAQKLGYGTSLFKRFQAAG 564
Query: 547 YPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEG 606
+PV+MLK QYRMHPE+ FPS+EFY+ LEDG + R WH Y CFGPF FFD+ +G
Sbjct: 565 FPVQMLKIQYRMHPEISIFPSKEFYEGVLEDGEGLS--KKRPWHSYSCFGPFCFFDV-DG 621
Query: 607 KESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKET 666
ESQP+GSGSW+N DEV+F+ LL+H++ YP+LKSSSQ+A+ISPYRHQVK ++ F+ T
Sbjct: 622 TESQPSGSGSWVNEDEVEFITLLYHQMAMRYPELKSSSQVAVISPYRHQVKLLKDHFRST 681
Query: 667 FGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILV 726
FG +S++V+D+ TVDG QGREK+V IFSCVR + ++ IGF++D+RRMNV ITRA+S++LV
Sbjct: 682 FGDQSKEVIDVNTVDGFQGREKEVVIFSCVRCNKEQKIGFVSDFRRMNVAITRARSAVLV 741
Query: 727 VGCASTLREDKHWNNLVKSAEKQDCLFRVSKPYASFFSDENLESM---RKNATTDNVQG- 782
VG ASTL+EDKHWNNLV+SA+++ F+V KP+ +FF D+ L++M R VQ
Sbjct: 742 VGSASTLKEDKHWNNLVESAKERGRYFQVPKPFTAFFVDDKLKTMKVERAPPELRTVQAL 801
Query: 783 -ADGHVPHDDETMHYANTGDA-DQGQADDIDNAD 814
A E M + GD D+G DD AD
Sbjct: 802 EAINEAVVGQELMDVDDAGDQEDEGYDDDPVEAD 835
>gi|297601165|ref|NP_001050457.2| Os03g0440200 [Oryza sativa Japonica Group]
gi|255674627|dbj|BAF12371.2| Os03g0440200 [Oryza sativa Japonica Group]
Length = 824
Score = 872 bits (2253), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/766 (57%), Positives = 563/766 (73%), Gaps = 46/766 (6%)
Query: 16 RFCKIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEE 75
RF KI+L WDY RLV +S+ + GL VK+TY V +YLA FEPLLFEE
Sbjct: 29 RFHKIVLSWDYVRLVADSKGGQQQAK--------GLGRVKNTYASVAEYLAVFEPLLFEE 80
Query: 76 VKAQIIQKKDEEEV---QEWKLRLVMECGEADGFHLPSVTYEADEVESISPNDLLLLSKE 132
VKAQI+Q + +EE Q W+ +V C E++GFH S+ D E +S NDLLLLSKE
Sbjct: 81 VKAQIVQGRSDEEEEAGQNWQKGIVASCTESEGFHKVSMAVLDDFREMVSENDLLLLSKE 140
Query: 133 EFKEGSTFPTTYAFALVEHCQAN-LLRLRMYLAGEVIHIN-KDAVKSQRLLNIHSLITSS 190
+F+EG T P+ YAFALVE + LR ++AGE+ ++N V RL I S+ +++
Sbjct: 141 KFEEGVT-PSAYAFALVEQRGGRETISLRTFVAGEIKNLNVAKPVSCSRLQRIASIFSTT 199
Query: 191 VSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQ--SWKIPGL 248
E L+ LKICSLSTI RE+ + SV SLPFKDLILSASEK+SG DQ +W +P
Sbjct: 200 ----ESFLWILKICSLSTIMREFSGMHSVASLPFKDLILSASEKNSGGNDQNRAWNVPEP 255
Query: 249 LHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKG 308
L +Y+K N N SQL+A++ GL R++FVLIQGPPGTGKTQTILGLLSA+LH+ PAR+ +KG
Sbjct: 256 LMDYLKTNLNDSQLDAVNAGLSRRSFVLIQGPPGTGKTQTILGLLSAVLHSAPARMQTKG 315
Query: 309 GLREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNS 368
G K GPEL + K+ HW +ASPWL+G NPRD IMP+DGDDGF+PT GNELKPEVV+S
Sbjct: 316 GFDVKKHGPELDIEGKHAHWMKASPWLIGVNPRDLIMPVDGDDGFYPT-GNELKPEVVSS 374
Query: 369 SRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDH 428
+R+YR VLVCAPSNSALDEIVLR+L TGIRDEN +Y PKIVRIGLKAHHSV +V++D+
Sbjct: 375 NRKYRAHVLVCAPSNSALDEIVLRVLQTGIRDENNNTYNPKIVRIGLKAHHSVKAVSMDY 434
Query: 429 LVEQKRD--DSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDV 486
L++QK D ++D + GA DR IRS+IL+EA IV STLSFSGS++ S++ FDV
Sbjct: 435 LIQQKLSGVDRSSDGGRRGAGEYDR--IRSSILDEAAIVFSTLSFSGSSIFSRMARAFDV 492
Query: 487 VIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAG 546
VIIDEAAQAV GDPVQLPATVIS A+ LGYGTSLFKR Q AG
Sbjct: 493 VIIDEAAQAV------------------GDPVQLPATVISSTAQKLGYGTSLFKRFQAAG 534
Query: 547 YPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEG 606
+PV+MLK QYRMHPE+ FPS+EFY+ LEDG + R WH Y CFGPF FFD+ +G
Sbjct: 535 FPVQMLKIQYRMHPEISIFPSKEFYEGVLEDGEGLS--KKRPWHSYSCFGPFCFFDV-DG 591
Query: 607 KESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKET 666
ESQP+GSGSW+N DEV+F+ LL+H++ YP+LKSSSQ+A+ISPYRHQVK ++ F+ T
Sbjct: 592 TESQPSGSGSWVNEDEVEFITLLYHQMAMRYPELKSSSQVAVISPYRHQVKLLKDHFRST 651
Query: 667 FGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILV 726
FG +S++V+D+ TVDG QG EK+V IFSCVR + ++ IGF++D+RRMNV ITRA+S++LV
Sbjct: 652 FGDQSKEVIDVNTVDGFQGCEKEVVIFSCVRCNKEQKIGFVSDFRRMNVAITRARSAVLV 711
Query: 727 VGCASTLREDKHWNNLVKSAEKQDCLFRVSKPYASFFSDENLESMR 772
VG ASTL+EDKHWNNLV+SA+++ F+V KP+ +FF D+ L++M+
Sbjct: 712 VGSASTLKEDKHWNNLVESAKERGRYFQVPKPFTAFFVDDKLKTMK 757
>gi|357163468|ref|XP_003579741.1| PREDICTED: probable helicase DDB_G0274399-like isoform 1
[Brachypodium distachyon]
Length = 802
Score = 857 bits (2214), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/766 (57%), Positives = 567/766 (74%), Gaps = 47/766 (6%)
Query: 16 RFCKIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEE 75
RF KI+L WDY RLV +SK D+ K GL+ VK+TY V +YL FEPLLFEE
Sbjct: 22 RFFKIVLSWDYLRLVA--------DSKGADKTK-GLQRVKNTYTSVAEYLGVFEPLLFEE 72
Query: 76 VKAQIIQKK--DEEEVQ-EWKLRLVMECGEADGFHLPSVTYEADEVESISPNDLLLLSKE 132
VKAQI+Q + +EEE+ +W+ LV E++GFH + E +S NDLLLLSKE
Sbjct: 73 VKAQIVQGRSGEEEEIGLDWQKGLVGTYTESEGFHKVQMAVVDCFQEIVSENDLLLLSKE 132
Query: 133 EFKEGSTFPTTYAFALVEHCQA-NLLRLRMYLAGEVIHIN-KDAVKSQRLLNIHSLITSS 190
+F+EG T PT YAFA+VE + LR ++ GE+ +++ VKS RL I S+ ++
Sbjct: 133 KFEEGVT-PTAYAFAVVEQRGGKGPVSLRTFVEGEIKNLDIAKPVKSSRLQRIASIFATN 191
Query: 191 VSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQ--SWKIPGL 248
+ L+ LK+CSLSTI REY A++SV SLPFKDLILSASEK+ DQ +W +P
Sbjct: 192 ----GQVLWILKMCSLSTILREYSAMQSVASLPFKDLILSASEKNKDGDDQNRAWNVPEP 247
Query: 249 LHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKG 308
L +Y+K N N SQL+A++ GL R++FVLIQGPPGTGKTQTILGLLSA+LH+ PARV +KG
Sbjct: 248 LMDYLKTNLNDSQLDAVNAGLSRRSFVLIQGPPGTGKTQTILGLLSAVLHSAPARVQTKG 307
Query: 309 GLREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNS 368
G K GPEL + K+ HW +ASPWL+GANPRD IMP+DGDDGF+PT GNELKPEV++S
Sbjct: 308 GFDVEKHGPELDIEGKHTHWMKASPWLIGANPRDLIMPVDGDDGFYPT-GNELKPEVISS 366
Query: 369 SRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDH 428
+R+YR VLVCAPSNSALDEIV R+L TGIRDEN +Y+PKIVRIGLKAHHSV +V++D+
Sbjct: 367 NRKYRAHVLVCAPSNSALDEIVSRVLQTGIRDENNNTYSPKIVRIGLKAHHSVKAVSMDY 426
Query: 429 LVEQKRD--DSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDV 486
L++QK D ++D + GA DR IR+++L+EA IV STLSFSGS + S++ FDV
Sbjct: 427 LIQQKLSGVDRSSDGGRRGAGEYDR--IRASVLDEAAIVFSTLSFSGSTVFSRMTRSFDV 484
Query: 487 VIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAG 546
VIIDEAAQAV GDPVQLPATVIS A+ LGYGTSLFKR Q AG
Sbjct: 485 VIIDEAAQAV------------------GDPVQLPATVISSTAQKLGYGTSLFKRFQAAG 526
Query: 547 YPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEG 606
+PV+MLK QYRMHPE+ FPS+EFY+ L+DG + R WH Y CFGPF FFDI +G
Sbjct: 527 FPVQMLKIQYRMHPEISIFPSKEFYEGILQDGEGLN--KKRPWHSYSCFGPFCFFDI-DG 583
Query: 607 KESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKET 666
ESQP+GSGSW+N DEV+F+ L++H+L + YP+LKSSSQ+A+ISPY QVK ++RF+ T
Sbjct: 584 IESQPSGSGSWVNEDEVEFITLIYHQLATHYPELKSSSQVAVISPYSLQVKLLKDRFRST 643
Query: 667 FGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILV 726
FG +S++V+D+ TVDG QGREK+V IFSCVR + +++IGF++D+RRMNV ITRA+S++LV
Sbjct: 644 FGDQSKEVIDVNTVDGFQGREKEVVIFSCVRCNKEQNIGFVSDFRRMNVAITRARSAVLV 703
Query: 727 VGCASTLREDKHWNNLVKSAEKQDCLFRVSKPYASFFSDENLESMR 772
+G ASTL++DKHWNNLV+SA+++D F VSKP+ +FF+++ ++M+
Sbjct: 704 IGSASTLKQDKHWNNLVESAKERDRFFTVSKPFTTFFAEDKFKTMK 749
>gi|54290635|dbj|BAD62206.1| regulator of nonsense transcripts 1-like [Oryza sativa Japonica
Group]
Length = 788
Score = 835 bits (2157), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/814 (54%), Positives = 562/814 (69%), Gaps = 75/814 (9%)
Query: 16 RFCKIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEE 75
RF KI+L WDY RLV +S+ + GL VK+TY V +YLA FEPLLFEE
Sbjct: 29 RFHKIVLSWDYVRLVADSKGGQQQAK--------GLGRVKNTYASVAEYLAVFEPLLFEE 80
Query: 76 VKAQIIQKKDEEEV---QEWKLRLVMECGEADGFHLPSVTYEADEVESISPNDLLLLSKE 132
VKAQI+Q + +EE Q+W+ +V C E++GFH S+ D E +S NDLLLLSKE
Sbjct: 81 VKAQIVQGRSDEEEEAGQDWQKGIVASCTESEGFHKVSMAVLDDFREMVSENDLLLLSKE 140
Query: 133 EFKEGSTFPTTYAFALVEHCQA-NLLRLRMYLAGEVIHIN-KDAVKSQRLLNIHSLITSS 190
+F+EG T P+ YAFALVE + LR ++AGE+ ++N V RL I S+ +++
Sbjct: 141 KFEEGVT-PSAYAFALVEQRGGRETISLRTFVAGEIKNLNVAKPVSCSRLQRIASIFSTT 199
Query: 191 VSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQ--SWKIPGL 248
E L+ LKICSLSTI RE+ + SV SLPFKDLILSASEK+SG DQ +W +P
Sbjct: 200 ----ESFLWILKICSLSTIMREFSGMHSVASLPFKDLILSASEKNSGGNDQNRAWNVPEP 255
Query: 249 LHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKG 308
L +Y+K N N SQL+A++ GL R++FVLIQ
Sbjct: 256 LMDYLKTNLNDSQLDAVNAGLSRRSFVLIQSS---------------------------- 287
Query: 309 GLREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNS 368
+++ HW +ASPWL+G NPRD IMP+DGDDGF+PT GNELKPEVV+S
Sbjct: 288 -------------CDRHAHWMKASPWLIGVNPRDLIMPVDGDDGFYPT-GNELKPEVVSS 333
Query: 369 SRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDH 428
+R+YR VLVCAPSNSALDEIVLR+L TGIRDEN +Y PKIVRIGLKAHHSV +V++D+
Sbjct: 334 NRKYRAHVLVCAPSNSALDEIVLRVLQTGIRDENNNTYNPKIVRIGLKAHHSVKAVSMDY 393
Query: 429 LVEQKRD--DSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDV 486
L++QK D ++D + GA DR IRS+IL+EA IV STLSFSGS++ S++ FDV
Sbjct: 394 LIQQKLSGVDRSSDGGRRGAGEYDR--IRSSILDEAAIVFSTLSFSGSSIFSRMARAFDV 451
Query: 487 VIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAG 546
VIIDEAAQAVEPATL+PL GCKQVFLVGDPVQLPATVIS A+ LGYGTSLFKR Q AG
Sbjct: 452 VIIDEAAQAVEPATLIPLIHGCKQVFLVGDPVQLPATVISSTAQKLGYGTSLFKRFQAAG 511
Query: 547 YPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEG 606
+PV+MLK QYRMHPE+ FPS+EFY+ LEDG + R WH Y CFGPF FFD+ +G
Sbjct: 512 FPVQMLKIQYRMHPEISIFPSKEFYEGVLEDGEGLS--KKRPWHSYSCFGPFCFFDV-DG 568
Query: 607 KESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKET 666
ESQP+GSGSW+N DEV+F+ LL+H++ YP+LKSSSQ+A+ISPYRHQVK ++ F+ T
Sbjct: 569 TESQPSGSGSWVNEDEVEFITLLYHQMAMRYPELKSSSQVAVISPYRHQVKLLKDHFRST 628
Query: 667 FGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILV 726
FG +S++V+D+ TVDG QGREK+V IFSCVR + ++ IGF++D+RRMNV ITRA+S++LV
Sbjct: 629 FGDQSKEVIDVNTVDGFQGREKEVVIFSCVRCNKEQKIGFVSDFRRMNVAITRARSAVLV 688
Query: 727 VGCASTLREDKHWNNLVKSAEKQDCLFRVSKPYASFFSDENLESM---RKNATTDNVQG- 782
VG ASTL+EDKHWNNLV+SA+++ F+V KP+ +FF D+ L++M R VQ
Sbjct: 689 VGSASTLKEDKHWNNLVESAKERGRYFQVPKPFTAFFVDDKLKTMKVERAPPELRTVQAL 748
Query: 783 -ADGHVPHDDETMHYANTGDA-DQGQADDIDNAD 814
A E M + GD D+G DD AD
Sbjct: 749 EAINEAVVGQELMDVDDAGDQEDEGYDDDPVEAD 782
>gi|27764657|gb|AAO23082.1| putative component of a tRNA splicing complex [Oryza sativa
Japonica Group]
Length = 788
Score = 832 bits (2148), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/814 (54%), Positives = 560/814 (68%), Gaps = 75/814 (9%)
Query: 16 RFCKIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEE 75
RF KI+L WDY RLV +S+ + GL VK+TY V +YLA FEPLLFEE
Sbjct: 29 RFHKIVLSWDYVRLVADSKGGQQQAK--------GLGRVKNTYASVAEYLAVFEPLLFEE 80
Query: 76 VKAQIIQKKDEEEV---QEWKLRLVMECGEADGFHLPSVTYEADEVESISPNDLLLLSKE 132
VKAQI+Q + +EE Q W+ +V C E++GFH S+ D E +S NDLLLLSKE
Sbjct: 81 VKAQIVQGRSDEEEEAGQNWQKGIVASCTESEGFHKVSMAVLDDFREMVSENDLLLLSKE 140
Query: 133 EFKEGSTFPTTYAFALVEHCQA-NLLRLRMYLAGEVIHIN-KDAVKSQRLLNIHSLITSS 190
+F+EG T P+ YAFALVE + LR ++AGE+ ++N V RL I S+ +++
Sbjct: 141 KFEEGVT-PSAYAFALVEQRGGRETISLRTFVAGEIKNLNVAKPVSCSRLQRIASIFSTT 199
Query: 191 VSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQ--SWKIPGL 248
E L+ LKICSLSTI RE+ + SV SLPFKDLILSASEK+SG DQ +W +P
Sbjct: 200 ----ESFLWILKICSLSTIMREFSGMHSVASLPFKDLILSASEKNSGGNDQNRAWNVPEP 255
Query: 249 LHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKG 308
L +Y+K N N SQL+A++ GL R++FVLIQ
Sbjct: 256 LMDYLKTNLNDSQLDAVNAGLSRRSFVLIQSS---------------------------- 287
Query: 309 GLREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNS 368
+++ HW +ASPWL+G NPRD IMP+DGDDGF+PT GNELKPEVV+S
Sbjct: 288 -------------CDRHAHWMKASPWLIGVNPRDLIMPVDGDDGFYPT-GNELKPEVVSS 333
Query: 369 SRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDH 428
+R+YR VLVCAPSNSALDEIVLR+L TGIRDEN +Y PKIVRIGLKAHHSV +V++D+
Sbjct: 334 NRKYRAHVLVCAPSNSALDEIVLRVLQTGIRDENNNTYNPKIVRIGLKAHHSVKAVSMDY 393
Query: 429 LVEQKRD--DSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDV 486
L++QK D ++D + GA DR IRS+IL+EA IV STLSFSGS++ S++ FDV
Sbjct: 394 LIQQKLSGVDRSSDGGRRGAGEYDR--IRSSILDEAAIVFSTLSFSGSSIFSRMARAFDV 451
Query: 487 VIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAG 546
VIIDEAAQAVEPATL+PL GCKQVFLVGDPVQLPATVIS A+ LGYGTSLFKR Q AG
Sbjct: 452 VIIDEAAQAVEPATLIPLIHGCKQVFLVGDPVQLPATVISSTAQKLGYGTSLFKRFQAAG 511
Query: 547 YPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEG 606
+PV+MLK QYRMHPE+ FPS+EFY+ LEDG + R WH Y CFGPF FFD+ +G
Sbjct: 512 FPVQMLKIQYRMHPEISIFPSKEFYEGVLEDGEGLS--KKRPWHSYSCFGPFCFFDV-DG 568
Query: 607 KESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKET 666
ESQP+GSGSW+N DEV+F+ LL+H++ YP+LKSSSQ+A+ISPYRHQVK ++ F+ T
Sbjct: 569 TESQPSGSGSWVNEDEVEFITLLYHQMAMRYPELKSSSQVAVISPYRHQVKLLKDHFRST 628
Query: 667 FGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILV 726
FG +S++V+D+ TVDG QG EK+V IFSCVR + ++ IGF++D+RRMNV ITRA+S++LV
Sbjct: 629 FGDQSKEVIDVNTVDGFQGCEKEVVIFSCVRCNKEQKIGFVSDFRRMNVAITRARSAVLV 688
Query: 727 VGCASTLREDKHWNNLVKSAEKQDCLFRVSKPYASFFSDENLESM---RKNATTDNVQG- 782
VG ASTL+EDKHWNNLV+SA+++ F+V KP+ +FF D+ L++M R VQ
Sbjct: 689 VGSASTLKEDKHWNNLVESAKERGRYFQVPKPFTAFFVDDKLKTMKVERAPPELRTVQAL 748
Query: 783 -ADGHVPHDDETMHYANTGDA-DQGQADDIDNAD 814
A E M + GD D+G DD AD
Sbjct: 749 EAINEAVVGQELMDVDDAGDQEDEGYDDDPVEAD 782
>gi|357163474|ref|XP_003579743.1| PREDICTED: probable helicase DDB_G0274399-like isoform 3
[Brachypodium distachyon]
Length = 780
Score = 813 bits (2100), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/766 (55%), Positives = 551/766 (71%), Gaps = 69/766 (9%)
Query: 16 RFCKIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEE 75
RF KI+L WDY RLV +SK D+ K GL+ VK+TY V +YL FEPLLFEE
Sbjct: 22 RFFKIVLSWDYLRLVA--------DSKGADKTK-GLQRVKNTYTSVAEYLGVFEPLLFEE 72
Query: 76 VKAQIIQKK--DEEEVQ-EWKLRLVMECGEADGFHLPSVTYEADEVESISPNDLLLLSKE 132
VKAQI+Q + +EEE+ +W+ LV E++GFH + E +S NDLLLLSKE
Sbjct: 73 VKAQIVQGRSGEEEEIGLDWQKGLVGTYTESEGFHKVQMAVVDCFQEIVSENDLLLLSKE 132
Query: 133 EFKEGSTFPTTYAFALVEHCQA-NLLRLRMYLAGEVIHIN-KDAVKSQRLLNIHSLITSS 190
+F+EG T PT YAFA+VE + LR ++ GE+ +++ VKS RL I S+ ++
Sbjct: 133 KFEEGVT-PTAYAFAVVEQRGGKGPVSLRTFVEGEIKNLDIAKPVKSSRLQRIASIFATN 191
Query: 191 VSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQ--SWKIPGL 248
+ L+ LK+CSLSTI REY A++SV SLPFKDLILSASEK+ DQ +W +P
Sbjct: 192 ----GQVLWILKMCSLSTILREYSAMQSVASLPFKDLILSASEKNKDGDDQNRAWNVPEP 247
Query: 249 LHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKG 308
L +Y+K N N SQL+A++ GL R++FVLIQ + +VH+
Sbjct: 248 LMDYLKTNLNDSQLDAVNAGLSRRSFVLIQ--------------------VSCDQVHT-- 285
Query: 309 GLREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNS 368
HW +ASPWL+GANPRD IMP+DGDDGF+PT GNELKPEV++S
Sbjct: 286 ------------------HWMKASPWLIGANPRDLIMPVDGDDGFYPT-GNELKPEVISS 326
Query: 369 SRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDH 428
+R+YR VLVCAPSNSALDEIV R+L TGIRDEN +Y+PKIVRIGLKAHHSV +V++D+
Sbjct: 327 NRKYRAHVLVCAPSNSALDEIVSRVLQTGIRDENNNTYSPKIVRIGLKAHHSVKAVSMDY 386
Query: 429 LVEQKRD--DSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDV 486
L++QK D ++D + GA DR IR+++L+EA IV STLSFSGS + S++ FDV
Sbjct: 387 LIQQKLSGVDRSSDGGRRGAGEYDR--IRASVLDEAAIVFSTLSFSGSTVFSRMTRSFDV 444
Query: 487 VIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAG 546
VIIDEAAQAVEPATLVPL GC+QVFLVGDPVQLPATVIS A+ LGYGTSLFKR Q AG
Sbjct: 445 VIIDEAAQAVEPATLVPLVHGCRQVFLVGDPVQLPATVISSTAQKLGYGTSLFKRFQAAG 504
Query: 547 YPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEG 606
+PV+MLK QYRMHPE+ FPS+EFY+ L+DG + R WH Y CFGPF FFDI +G
Sbjct: 505 FPVQMLKIQYRMHPEISIFPSKEFYEGILQDGEGLN--KKRPWHSYSCFGPFCFFDI-DG 561
Query: 607 KESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKET 666
ESQP+GSGSW+N DEV+F+ L++H+L + YP+LKSSSQ+A+ISPY QVK ++RF+ T
Sbjct: 562 IESQPSGSGSWVNEDEVEFITLIYHQLATHYPELKSSSQVAVISPYSLQVKLLKDRFRST 621
Query: 667 FGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILV 726
FG +S++V+D+ TVDG QGREK+V IFSCVR + +++IGF++D+RRMNV ITRA+S++LV
Sbjct: 622 FGDQSKEVIDVNTVDGFQGREKEVVIFSCVRCNKEQNIGFVSDFRRMNVAITRARSAVLV 681
Query: 727 VGCASTLREDKHWNNLVKSAEKQDCLFRVSKPYASFFSDENLESMR 772
+G ASTL++DKHWNNLV+SA+++D F VSKP+ +FF+++ ++M+
Sbjct: 682 IGSASTLKQDKHWNNLVESAKERDRFFTVSKPFTTFFAEDKFKTMK 727
>gi|413933077|gb|AFW67628.1| hypothetical protein ZEAMMB73_310303 [Zea mays]
Length = 824
Score = 804 bits (2077), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/784 (53%), Positives = 551/784 (70%), Gaps = 62/784 (7%)
Query: 16 RFCKIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEE 75
RF KI+L WDY RL+ ES + K +K L+ VK+TY V +YL FEPLLFEE
Sbjct: 21 RFQKIVLSWDYLRLIAES--KGGKQAKV-------LQHVKNTYVSVAEYLGVFEPLLFEE 71
Query: 76 VKAQIIQKK---DEEEVQEWKLRLVMECGEADGFHLPSVTYEADEVESISPNDLLLLSKE 132
VKAQIIQ + +EE +W+ V C E++GFH SV E + +++S NDLLL+SKE
Sbjct: 72 VKAQIIQGRSNDEEESGMDWRRGAVGSCTESEGFHKLSVAVEDNFQDNVSENDLLLISKE 131
Query: 133 EFKEGSTFPTTYAFALVEHCQANL-LRLRMYLAGEVIHIN-KDAVKSQRLLNIHSLITSS 190
+F+EGST P YAFALVE + + LR ++AGE+ ++N VKS RL + S+I S
Sbjct: 132 KFEEGST-PNAYAFALVEQRGGGIHISLRTFVAGEIQNLNVAKPVKSTRLQHFASIIASQ 190
Query: 191 VSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQS--WKIPGL 248
S L+ LK+CSLSTI RE+ A+ SV SLPFKDLILSA+E DQS W +P
Sbjct: 191 NSL----LWILKVCSLSTIMREFTAMHSVASLPFKDLILSATEAHKDGDDQSRAWNVPEP 246
Query: 249 LHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKG 308
L +Y+K N N SQLEA++ GL R++FVLIQGPPGTGKTQTILGLLSA+LH+ PAR+ KG
Sbjct: 247 LMDYLKVNLNDSQLEAVNAGLSRRSFVLIQGPPGTGKTQTILGLLSAVLHSAPARMQIKG 306
Query: 309 GLREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNS 368
G +K GPEL + K HW +ASPWL+GANPRD IMP+DGDDGF+P TGNEL
Sbjct: 307 GFDVLKHGPELDIDGKRAHWIKASPWLLGANPRDLIMPVDGDDGFYP-TGNEL------- 358
Query: 369 SRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDH 428
VL +I + N IRDEN +Y PKIVRIG+KA HSV +V++D+
Sbjct: 359 -------VLGLFTPYMEKKKIFIETRNR-IRDENNNTYNPKIVRIGVKALHSVKAVSMDY 410
Query: 429 LVEQKRD--DSAADKQKHGATRKDRDSIRSAILNEAVIV-------CSTL----SFSGSA 475
L++QK D D + GA DR IR++IL+EA IV CS + FS +
Sbjct: 411 LIQQKLSGVDRTLDGGRRGAGEYDR--IRASILDEAAIVHLLINYKCSLIIPITVFSLPS 468
Query: 476 LLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYG 535
+ ++ FDVVIIDEAAQAVEPATL+PL GC+Q+FLVGDPVQLPATVIS A+ LGYG
Sbjct: 469 KICRMTRAFDVVIIDEAAQAVEPATLIPLIHGCRQIFLVGDPVQLPATVISQTAQKLGYG 528
Query: 536 TSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCF 595
TSLFKR Q AG+PV+MLK QYRMHPE+ +FPS+EFY+ L+DG + R WH Y CF
Sbjct: 529 TSLFKRFQAAGFPVQMLKIQYRMHPEISTFPSKEFYEGVLQDGEGLS--RKRPWHSYSCF 586
Query: 596 GPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQ 655
GPF FFD+ +G ESQP+GSGSW+N DEV+F+ LL+H+L YP+LKSS ++ +ISPYRHQ
Sbjct: 587 GPFCFFDV-DGIESQPSGSGSWVNQDEVEFITLLYHQLALRYPELKSSPEVGVISPYRHQ 645
Query: 656 VKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNV 715
VK ++ F+ TFG +S++++D++TVDG QGREK++ IFSCVR + ++ IGF++D+RRMNV
Sbjct: 646 VKLLKDSFRSTFGDQSRELIDVSTVDGFQGREKEIVIFSCVRCNKEQKIGFVSDFRRMNV 705
Query: 716 GITRAKSSIL-------VVGCASTLREDKHWNNLVKSAEKQDCLFRVSKPYASFFSDENL 768
ITRAKS++L VVG ASTL++DKHWNNLV+SA++++CLF+V KP +FF+++NL
Sbjct: 706 AITRAKSAVLKGRPGVVVVGSASTLKQDKHWNNLVESAKERNCLFKVPKPLTAFFAEDNL 765
Query: 769 ESMR 772
++M+
Sbjct: 766 KTMK 769
>gi|32490215|emb|CAE05958.1| OSJNBb0088C09.17 [Oryza sativa Japonica Group]
gi|116309413|emb|CAH66489.1| OSIGBa0076I14.10 [Oryza sativa Indica Group]
Length = 770
Score = 793 bits (2048), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/814 (52%), Positives = 546/814 (67%), Gaps = 93/814 (11%)
Query: 16 RFCKIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEE 75
RF KI+L WDYFRLV +S+ + GL VK+TY V +YLA FEPLLFEE
Sbjct: 29 RFHKIVLSWDYFRLVADSKGGQQQAK--------GLGRVKNTYASVAEYLAVFEPLLFEE 80
Query: 76 VKAQIIQKKDEEEV---QEWKLRLVMECGEADGFHLPSVTYEADEVESISPNDLLLLSKE 132
VKAQI+Q + +EE Q+W+ +V C E++GFH S+ D E +S NDLLLLSKE
Sbjct: 81 VKAQIVQGRSDEEEEAGQDWQKGIVASCTESEGFHKVSMAVLDDFREMVSENDLLLLSKE 140
Query: 133 EFKEGSTFPTTYAFALVEHCQA-NLLRLRMYLAGEVIHIN-KDAVKSQRLLNIHSLITSS 190
+F+EG T P+ YAFALVE + LR ++AGE+ ++N V RL I S+ +++
Sbjct: 141 KFEEGVT-PSAYAFALVEQRGGRETISLRTFVAGEIKNLNVAKPVSCSRLQRIASIFSTT 199
Query: 191 VSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQ--SWKIPGL 248
E L+ LKICSLSTI RE+ + SV SLPFKDLILSASEK+SG DQ +W +P
Sbjct: 200 ----ESFLWILKICSLSTIMREFSGMHSVASLPFKDLILSASEKNSGGNDQNRAWNVPEP 255
Query: 249 LHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKG 308
L +Y+K N N SQL+A++ GL R++FVLIQ
Sbjct: 256 LMDYLKTNLNDSQLDAVNAGLSRRSFVLIQSS---------------------------- 287
Query: 309 GLREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNS 368
+++ HW +ASPWL+G NPRD IMP+DGDDGF+PT GNELKPEVV+S
Sbjct: 288 -------------CDRHAHWMKASPWLIGVNPRDLIMPVDGDDGFYPT-GNELKPEVVSS 333
Query: 369 SRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDH 428
+R+YR VLVCAPSNSALDEIVLR+L GIRDEN +Y PKIVRIGLKAHHSV +V++D+
Sbjct: 334 NRKYRAHVLVCAPSNSALDEIVLRVLQIGIRDENNNTYNPKIVRIGLKAHHSVKAVSMDY 393
Query: 429 LVEQKRD--DSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDV 486
L++QK D ++D + GA DR IRS+IL+EA IV STLSFSGS++ S++ FDV
Sbjct: 394 LIQQKLSGVDRSSDGGRRGAGEYDR--IRSSILDEAAIVFSTLSFSGSSIFSRMARAFDV 451
Query: 487 VIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAG 546
VIIDEAAQAV GDPVQLPATVIS A+ LGYGTSLFKR Q AG
Sbjct: 452 VIIDEAAQAV------------------GDPVQLPATVISSTAQKLGYGTSLFKRFQAAG 493
Query: 547 YPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEG 606
+PV+MLK QYRMHPE+ FPS+EFY+ LEDG + R WH Y CFGPF FFD+ +G
Sbjct: 494 FPVQMLKIQYRMHPEISIFPSKEFYEGVLEDGEGLS--KKRPWHSYSCFGPFCFFDV-DG 550
Query: 607 KESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKET 666
ESQP+GSGSW+N DEV+F+ LL+H++ YP+LKSSSQ+A+ISPYRHQVK ++ F+ T
Sbjct: 551 TESQPSGSGSWVNEDEVEFITLLYHQMAMRYPELKSSSQVAVISPYRHQVKLLKDHFRST 610
Query: 667 FGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILV 726
FG +S++V+D+ TVDG QGREK+V IFSCVR + ++ IGF++D+RRMNV ITRA+S++LV
Sbjct: 611 FGDQSKEVIDVNTVDGFQGREKEVVIFSCVRCNKEQKIGFVSDFRRMNVAITRARSAVLV 670
Query: 727 VGCASTLREDKHWNNLVKSAEKQDCLFRVSKPYASFFSDENLESM---RKNATTDNVQG- 782
VG ASTL+EDKHWNNLV+SA+++ F+V KP+ +FF D+ L++M R VQ
Sbjct: 671 VGSASTLKEDKHWNNLVESAKERGRYFQVPKPFTAFFVDDKLKTMKVERAPPELRTVQAL 730
Query: 783 -ADGHVPHDDETMHYANTGDA-DQGQADDIDNAD 814
A E M + GD D+G DD AD
Sbjct: 731 EAINEAVVGQELMDVDDAGDQEDEGYDDDPVEAD 764
>gi|57834047|emb|CAE05419.2| OSJNBa0035I04.7 [Oryza sativa Japonica Group]
Length = 744
Score = 793 bits (2048), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/814 (52%), Positives = 546/814 (67%), Gaps = 93/814 (11%)
Query: 16 RFCKIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEE 75
RF KI+L WDYFRLV +S+ + GL VK+TY V +YLA FEPLLFEE
Sbjct: 3 RFHKIVLSWDYFRLVADSKGGQQQAK--------GLGRVKNTYASVAEYLAVFEPLLFEE 54
Query: 76 VKAQIIQKKDEEEV---QEWKLRLVMECGEADGFHLPSVTYEADEVESISPNDLLLLSKE 132
VKAQI+Q + +EE Q+W+ +V C E++GFH S+ D E +S NDLLLLSKE
Sbjct: 55 VKAQIVQGRSDEEEEAGQDWQKGIVASCTESEGFHKVSMAVLDDFREMVSENDLLLLSKE 114
Query: 133 EFKEGSTFPTTYAFALVEHCQA-NLLRLRMYLAGEVIHIN-KDAVKSQRLLNIHSLITSS 190
+F+EG T P+ YAFALVE + LR ++AGE+ ++N V RL I S+ +++
Sbjct: 115 KFEEGVT-PSAYAFALVEQRGGRETISLRTFVAGEIKNLNVAKPVSCSRLQRIASIFSTT 173
Query: 191 VSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQ--SWKIPGL 248
E L+ LKICSLSTI RE+ + SV SLPFKDLILSASEK+SG DQ +W +P
Sbjct: 174 ----ESFLWILKICSLSTIMREFSGMHSVASLPFKDLILSASEKNSGGNDQNRAWNVPEP 229
Query: 249 LHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKG 308
L +Y+K N N SQL+A++ GL R++FVLIQ
Sbjct: 230 LMDYLKTNLNDSQLDAVNAGLSRRSFVLIQSS---------------------------- 261
Query: 309 GLREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNS 368
+++ HW +ASPWL+G NPRD IMP+DGDDGF+PT GNELKPEVV+S
Sbjct: 262 -------------CDRHAHWMKASPWLIGVNPRDLIMPVDGDDGFYPT-GNELKPEVVSS 307
Query: 369 SRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDH 428
+R+YR VLVCAPSNSALDEIVLR+L GIRDEN +Y PKIVRIGLKAHHSV +V++D+
Sbjct: 308 NRKYRAHVLVCAPSNSALDEIVLRVLQIGIRDENNNTYNPKIVRIGLKAHHSVKAVSMDY 367
Query: 429 LVEQKRD--DSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDV 486
L++QK D ++D + GA DR IRS+IL+EA IV STLSFSGS++ S++ FDV
Sbjct: 368 LIQQKLSGVDRSSDGGRRGAGEYDR--IRSSILDEAAIVFSTLSFSGSSIFSRMARAFDV 425
Query: 487 VIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAG 546
VIIDEAAQAV GDPVQLPATVIS A+ LGYGTSLFKR Q AG
Sbjct: 426 VIIDEAAQAV------------------GDPVQLPATVISSTAQKLGYGTSLFKRFQAAG 467
Query: 547 YPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEG 606
+PV+MLK QYRMHPE+ FPS+EFY+ LEDG + R WH Y CFGPF FFD+ +G
Sbjct: 468 FPVQMLKIQYRMHPEISIFPSKEFYEGVLEDGEGLS--KKRPWHSYSCFGPFCFFDV-DG 524
Query: 607 KESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKET 666
ESQP+GSGSW+N DEV+F+ LL+H++ YP+LKSSSQ+A+ISPYRHQVK ++ F+ T
Sbjct: 525 TESQPSGSGSWVNEDEVEFITLLYHQMAMRYPELKSSSQVAVISPYRHQVKLLKDHFRST 584
Query: 667 FGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILV 726
FG +S++V+D+ TVDG QGREK+V IFSCVR + ++ IGF++D+RRMNV ITRA+S++LV
Sbjct: 585 FGDQSKEVIDVNTVDGFQGREKEVVIFSCVRCNKEQKIGFVSDFRRMNVAITRARSAVLV 644
Query: 727 VGCASTLREDKHWNNLVKSAEKQDCLFRVSKPYASFFSDENLESM---RKNATTDNVQG- 782
VG ASTL+EDKHWNNLV+SA+++ F+V KP+ +FF D+ L++M R VQ
Sbjct: 645 VGSASTLKEDKHWNNLVESAKERGRYFQVPKPFTAFFVDDKLKTMKVERAPPELRTVQAL 704
Query: 783 -ADGHVPHDDETMHYANTGDA-DQGQADDIDNAD 814
A E M + GD D+G DD AD
Sbjct: 705 EAINEAVVGQELMDVDDAGDQEDEGYDDDPVEAD 738
>gi|302811082|ref|XP_002987231.1| hypothetical protein SELMODRAFT_125376 [Selaginella moellendorffii]
gi|300145128|gb|EFJ11807.1| hypothetical protein SELMODRAFT_125376 [Selaginella moellendorffii]
Length = 820
Score = 790 bits (2039), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/813 (50%), Positives = 556/813 (68%), Gaps = 34/813 (4%)
Query: 10 DEASIF-----RFCKIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDY 64
D+ASI + KI+L WDY +L+ +S+ +N + S V L V T+ ++DY
Sbjct: 2 DKASIVASHHTKLQKILLRWDYIQLLAQSKRKN-RVSAPV------LPTVPQTFASLEDY 54
Query: 65 LATFEPLLFEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADEVESISPN 124
+A FEPLL EE +AQI++ D+ E+ + + C + + F+ V A+ E N
Sbjct: 55 IAVFEPLLLEECRAQIVRGDDDGGAAEYHVAALTHCEKVNEFYSAKVAVRAEIGELFPDN 114
Query: 125 DLLLLSKEEFKEGSTFPTTYAFALVE-HCQANLLRLRMYLAGEVIHINKDAVKSQRLLNI 183
+L+L++KE G+ P TYA A+V+ H +L LR+YL + + ++DA L
Sbjct: 115 ELILITKEPLG-GADLPKTYALAMVDGHEGLQILSLRLYLESDSSN-DRDARLRLALQAS 172
Query: 184 HS----LITSSVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSAS--EKSSG 237
S S +++++ LF L +C+LSTI+REY+AL S+GS+ F D I+SAS + S+G
Sbjct: 173 GSGWFICKVSELTSIQCFLFFLTLCNLSTISREYVALCSLGSIAFSDTIVSASASDVSAG 232
Query: 238 SQDQSWKIPGLLHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAIL 297
+ IP L +Y++ HN SQ+ AI GL + VLIQGPPGTGKTQTILGLLS IL
Sbjct: 233 CR----TIPRGLKDYLQTTHNQSQINAIQAGLSGQPLVLIQGPPGTGKTQTILGLLSVIL 288
Query: 298 HATPARVHSKGGLREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTT 357
HAT A +G LR +++ E+ HEK +HW +ASPWL NPRD IMP DGDDGFFP
Sbjct: 289 HATVATFSQEGSLRLLQKS-EMSSHEKLDHWLKASPWLGVGNPRDLIMPEDGDDGFFPCA 347
Query: 358 GNELKPEVVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKA 417
N+ + EVV ++R++R VLVCAPSNSALDEIVLRLL +GIRDEN SY P IVR+GL A
Sbjct: 348 PNQFRAEVVGTTRKHRAHVLVCAPSNSALDEIVLRLLKSGIRDENGDSYVPSIVRMGLNA 407
Query: 418 HHSVNSVAIDHLVEQKRDDSAADKQKHGATRKDRDSIRS----AILNEAVIVCSTLSFSG 473
HHSV SV +DHLV + + D+ A R AIL EA IVCSTLSFSG
Sbjct: 408 HHSVQSVCMDHLVGVDQRLQSIDRSMSSARGGGGGRERERVRLAILEEAAIVCSTLSFSG 467
Query: 474 SALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLG 533
S++ S++ GFDVV+IDEAAQAVEP+TLVPL GCKQ FLVGDP+QLPATV+S A G
Sbjct: 468 SSVFSRMKRGFDVVVIDEAAQAVEPSTLVPLTHGCKQAFLVGDPIQLPATVLSTEAVKHG 527
Query: 534 YGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYR 593
YGTS+FKR Q+AGYPV+ML TQYRMHP++R FPS+EFY EALEDG++VE T+R WHEY
Sbjct: 528 YGTSMFKRFQKAGYPVQMLNTQYRMHPQIRDFPSKEFYGEALEDGAEVEQQTSRAWHEYC 587
Query: 594 CFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYR 653
CFGPF+FFDI EG+E+QP GSGS+IN DE +FVL+L+ LI++YP+LK +A+ISPY+
Sbjct: 588 CFGPFAFFDI-EGRETQPPGSGSYINSDEAEFVLVLYRHLIALYPELKGGPHVAVISPYK 646
Query: 654 HQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRM 713
HQV + RF E G ++ +++DI TVDG QGREKD+AIFSCVRA+ K IGF++D+RRM
Sbjct: 647 HQVTTLRTRFAEVLGKDAARLIDINTVDGFQGREKDIAIFSCVRANKSKGIGFVSDFRRM 706
Query: 714 NVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFR-VSKPYASFFSDENLESMR 772
NVG+TRA++S+LVVGCA+ LR+D+HW NL+K A++++ +F+ V KPY + F++ +L + +
Sbjct: 707 NVGLTRARASMLVVGCAAALRQDEHWGNLIKHAQQRNRMFKVVQKPYHALFNEASLAATK 766
Query: 773 KNATTD-NVQGADGHVPHDDETMHYANTGDADQ 804
K + VQ D + HY + G+A+Q
Sbjct: 767 KMSDGPLPVQEGDAMEVEMELPSHY-DLGEAEQ 798
>gi|108709046|gb|ABF96841.1| expressed protein [Oryza sativa Japonica Group]
Length = 770
Score = 788 bits (2035), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/814 (52%), Positives = 544/814 (66%), Gaps = 93/814 (11%)
Query: 16 RFCKIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEE 75
RF KI+L WDY RLV +S+ + GL VK+TY V +YLA FEPLLFEE
Sbjct: 29 RFHKIVLSWDYVRLVADSKGGQQQAK--------GLGRVKNTYASVAEYLAVFEPLLFEE 80
Query: 76 VKAQIIQKKDEEEV---QEWKLRLVMECGEADGFHLPSVTYEADEVESISPNDLLLLSKE 132
VKAQI+Q + +EE Q W+ +V C E++GFH S+ D E +S NDLLLLSKE
Sbjct: 81 VKAQIVQGRSDEEEEAGQNWQKGIVASCTESEGFHKVSMAVLDDFREMVSENDLLLLSKE 140
Query: 133 EFKEGSTFPTTYAFALVEHCQA-NLLRLRMYLAGEVIHIN-KDAVKSQRLLNIHSLITSS 190
+F+EG T P+ YAFALVE + LR ++AGE+ ++N V RL I S+ +++
Sbjct: 141 KFEEGVT-PSAYAFALVEQRGGRETISLRTFVAGEIKNLNVAKPVSCSRLQRIASIFSTT 199
Query: 191 VSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQ--SWKIPGL 248
E L+ LKICSLSTI RE+ + SV SLPFKDLILSASEK+SG DQ +W +P
Sbjct: 200 ----ESFLWILKICSLSTIMREFSGMHSVASLPFKDLILSASEKNSGGNDQNRAWNVPEP 255
Query: 249 LHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKG 308
L +Y+K N N SQL+A++ GL R++FVLIQ
Sbjct: 256 LMDYLKTNLNDSQLDAVNAGLSRRSFVLIQSS---------------------------- 287
Query: 309 GLREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNS 368
+++ HW +ASPWL+G NPRD IMP+DGDDGF+PT GNELKPEVV+S
Sbjct: 288 -------------CDRHAHWMKASPWLIGVNPRDLIMPVDGDDGFYPT-GNELKPEVVSS 333
Query: 369 SRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDH 428
+R+YR VLVCAPSNSALDEIVLR+L TGIRDEN +Y PKIVRIGLKAHHSV +V++D+
Sbjct: 334 NRKYRAHVLVCAPSNSALDEIVLRVLQTGIRDENNNTYNPKIVRIGLKAHHSVKAVSMDY 393
Query: 429 LVEQKRD--DSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDV 486
L++QK D ++D + GA DR IRS+IL+EA IV STLSFSGS++ S++ FDV
Sbjct: 394 LIQQKLSGVDRSSDGGRRGAGEYDR--IRSSILDEAAIVFSTLSFSGSSIFSRMARAFDV 451
Query: 487 VIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAG 546
VIIDEAAQAV GDPVQLPATVIS A+ LGYGTSLFKR Q AG
Sbjct: 452 VIIDEAAQAV------------------GDPVQLPATVISSTAQKLGYGTSLFKRFQAAG 493
Query: 547 YPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEG 606
+PV+MLK QYRMHPE+ FPS+EFY+ LEDG + R WH Y CFGPF FFD+ +G
Sbjct: 494 FPVQMLKIQYRMHPEISIFPSKEFYEGVLEDGEGLS--KKRPWHSYSCFGPFCFFDV-DG 550
Query: 607 KESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKET 666
ESQP+GSGSW+N DEV+F+ LL+H++ YP+LKSSSQ+A+ISPYRHQVK ++ F+ T
Sbjct: 551 TESQPSGSGSWVNEDEVEFITLLYHQMAMRYPELKSSSQVAVISPYRHQVKLLKDHFRST 610
Query: 667 FGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILV 726
FG +S++V+D+ TVDG QG EK+V IFSCVR + ++ IGF++D+RRMNV ITRA+S++LV
Sbjct: 611 FGDQSKEVIDVNTVDGFQGCEKEVVIFSCVRCNKEQKIGFVSDFRRMNVAITRARSAVLV 670
Query: 727 VGCASTLREDKHWNNLVKSAEKQDCLFRVSKPYASFFSDENLESM---RKNATTDNVQG- 782
VG ASTL+EDKHWNNLV+SA+++ F+V KP+ +FF D+ L++M R VQ
Sbjct: 671 VGSASTLKEDKHWNNLVESAKERGRYFQVPKPFTAFFVDDKLKTMKVERAPPELRTVQAL 730
Query: 783 -ADGHVPHDDETMHYANTGDA-DQGQADDIDNAD 814
A E M + GD D+G DD AD
Sbjct: 731 EAINEAVVGQELMDVDDAGDQEDEGYDDDPVEAD 764
>gi|357163477|ref|XP_003579744.1| PREDICTED: probable helicase DDB_G0274399-like isoform 4
[Brachypodium distachyon]
Length = 762
Score = 771 bits (1990), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/766 (53%), Positives = 535/766 (69%), Gaps = 87/766 (11%)
Query: 16 RFCKIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEE 75
RF KI+L WDY RLV +SK D+ K GL+ VK+TY V +YL FEPLLFEE
Sbjct: 22 RFFKIVLSWDYLRLVA--------DSKGADKTK-GLQRVKNTYTSVAEYLGVFEPLLFEE 72
Query: 76 VKAQIIQKK--DEEEVQ-EWKLRLVMECGEADGFHLPSVTYEADEVESISPNDLLLLSKE 132
VKAQI+Q + +EEE+ +W+ LV E++GFH + E +S NDLLLLSKE
Sbjct: 73 VKAQIVQGRSGEEEEIGLDWQKGLVGTYTESEGFHKVQMAVVDCFQEIVSENDLLLLSKE 132
Query: 133 EFKEGSTFPTTYAFALVEHCQA-NLLRLRMYLAGEVIHIN-KDAVKSQRLLNIHSLITSS 190
+F+EG T PT YAFA+VE + LR ++ GE+ +++ VKS RL I S+ ++
Sbjct: 133 KFEEGVT-PTAYAFAVVEQRGGKGPVSLRTFVEGEIKNLDIAKPVKSSRLQRIASIFATN 191
Query: 191 VSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQ--SWKIPGL 248
+ L+ LK+CSLSTI REY A++SV SLPFKDLILSASEK+ DQ +W +P
Sbjct: 192 ----GQVLWILKMCSLSTILREYSAMQSVASLPFKDLILSASEKNKDGDDQNRAWNVPEP 247
Query: 249 LHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKG 308
L +Y+K N N SQL+A++ GL R++FVLIQ + +VH+
Sbjct: 248 LMDYLKTNLNDSQLDAVNAGLSRRSFVLIQ--------------------VSCDQVHT-- 285
Query: 309 GLREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNS 368
HW +ASPWL+GANPRD IMP+DGDDGF+PT GNELKPEV++S
Sbjct: 286 ------------------HWMKASPWLIGANPRDLIMPVDGDDGFYPT-GNELKPEVISS 326
Query: 369 SRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDH 428
+R+YR VLVCAPSNSALDEIV R+L TGIRDEN +Y+PKIVRIGLKAHHSV +V++D+
Sbjct: 327 NRKYRAHVLVCAPSNSALDEIVSRVLQTGIRDENNNTYSPKIVRIGLKAHHSVKAVSMDY 386
Query: 429 LVEQKRD--DSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDV 486
L++QK D ++D + GA DR IR+++L+EA IV STLSFSGS + S++ FDV
Sbjct: 387 LIQQKLSGVDRSSDGGRRGAGEYDR--IRASVLDEAAIVFSTLSFSGSTVFSRMTRSFDV 444
Query: 487 VIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAG 546
VIIDEAAQAV GDPVQLPATVIS A+ LGYGTSLFKR Q AG
Sbjct: 445 VIIDEAAQAV------------------GDPVQLPATVISSTAQKLGYGTSLFKRFQAAG 486
Query: 547 YPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEG 606
+PV+MLK QYRMHPE+ FPS+EFY+ L+DG + R WH Y CFGPF FFDI +G
Sbjct: 487 FPVQMLKIQYRMHPEISIFPSKEFYEGILQDGEGLN--KKRPWHSYSCFGPFCFFDI-DG 543
Query: 607 KESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKET 666
ESQP+GSGSW+N DEV+F+ L++H+L + YP+LKSSSQ+A+ISPY QVK ++RF+ T
Sbjct: 544 IESQPSGSGSWVNEDEVEFITLIYHQLATHYPELKSSSQVAVISPYSLQVKLLKDRFRST 603
Query: 667 FGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILV 726
FG +S++V+D+ TVDG QGREK+V IFSCVR + +++IGF++D+RRMNV ITRA+S++LV
Sbjct: 604 FGDQSKEVIDVNTVDGFQGREKEVVIFSCVRCNKEQNIGFVSDFRRMNVAITRARSAVLV 663
Query: 727 VGCASTLREDKHWNNLVKSAEKQDCLFRVSKPYASFFSDENLESMR 772
+G ASTL++DKHWNNLV+SA+++D F VSKP+ +FF+++ ++M+
Sbjct: 664 IGSASTLKQDKHWNNLVESAKERDRFFTVSKPFTTFFAEDKFKTMK 709
>gi|224140843|ref|XP_002323788.1| predicted protein [Populus trichocarpa]
gi|222866790|gb|EEF03921.1| predicted protein [Populus trichocarpa]
Length = 565
Score = 761 bits (1964), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/539 (69%), Positives = 428/539 (79%), Gaps = 26/539 (4%)
Query: 307 KGGLREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVV 366
K GL E KRG ELP+ EKYNHW RASPW G NPRD MP DGDDGFFPT+GN+ KPEV+
Sbjct: 31 KAGLHETKRGSELPIQEKYNHWARASPWWTGNNPRDKNMPKDGDDGFFPTSGNDFKPEVI 90
Query: 367 NSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAI 426
SSR+Y VRVLVCAPSNSALDEIVLRLL TG+ DEN+RSY PKIVRIGLKAHHSV SV +
Sbjct: 91 ASSRKYHVRVLVCAPSNSALDEIVLRLLKTGVHDENVRSYNPKIVRIGLKAHHSVQSVCM 150
Query: 427 DHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDV 486
D+LV+QK+ +SA+DKQKH D DSIR+AIL E+VIV STLSFSGSAL SKLNHGFDV
Sbjct: 151 DNLVKQKQGESASDKQKHRTAGGDTDSIRAAILEESVIVFSTLSFSGSALFSKLNHGFDV 210
Query: 487 VIIDEAAQAVEPATLVPLATGCKQVFLV-------------------GDPVQLPATVISP 527
VIIDEAAQAVEPATLVPL GCKQVFLV GDPVQLPATVISP
Sbjct: 211 VIIDEAAQAVEPATLVPLVNGCKQVFLVSKIHTNIKRLLDNLTVLIVGDPVQLPATVISP 270
Query: 528 VAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR 587
A GYGTSLF+R QRAGYPV MLK QYRMHPE+RSFPS EFY EAL+D D+E TTR
Sbjct: 271 TAGKFGYGTSLFERFQRAGYPVNMLKMQYRMHPEIRSFPSSEFYAEALQDADDLERRTTR 330
Query: 588 DWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLA 647
DWH+Y CFGPF FFD+HEGKESQP+GSGSW+N+DEV+FVLLL+HKL++MYP+L+SSSQ A
Sbjct: 331 DWHQYHCFGPFCFFDVHEGKESQPSGSGSWVNVDEVEFVLLLYHKLVTMYPELRSSSQFA 390
Query: 648 IISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFL 707
IISPYRHQVK FQ+RF++ FG ES+K VDI TVDG QGREKDVAIFSCVR++D + IGF+
Sbjct: 391 IISPYRHQVKLFQDRFRDAFGQESKKFVDIQTVDGFQGREKDVAIFSCVRSNDDRRIGFV 450
Query: 708 ADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRVSKPYASFFSDEN 767
+D RRMNVGITRAKS++LVVG ASTLR D+HWNNLV+SAEK++ LF+VSKPY+SFFSD N
Sbjct: 451 SDARRMNVGITRAKSAVLVVGSASTLRNDEHWNNLVESAEKRNVLFKVSKPYSSFFSDSN 510
Query: 768 LESMR-KNATTDNVQGADGHVPHDDETMHYANTGDADQGQADDIDNADG--DAEMYDAD 823
L SM+ + + D + D + +E M + AD+ QA+D D DG D YD D
Sbjct: 511 LNSMKVERSLPDGLDTGDMEI---NELMD-VHREHADEEQAEDNDLEDGEMDGGGYDED 565
>gi|168044414|ref|XP_001774676.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673976|gb|EDQ60491.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 911
Score = 747 bits (1928), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/846 (48%), Positives = 537/846 (63%), Gaps = 101/846 (11%)
Query: 16 RFCKIILGWDYFRLVKESQERNDKNSKKVDRGK-LGLREVKDTYKDVDDYLATFEPLLFE 74
R K +L WDY R+V E + N K K D K LR V D +KD+D+YL FE LL E
Sbjct: 23 RLQKSVLAWDYIRIVTEDKA-NQKKRKASDLAKGSALRNVPDKFKDLDEYLEVFESLLLE 81
Query: 75 EVKAQIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADEVESISPNDLLLLSKEE- 133
E +AQI++ +EE ++ + V++C + FH + +A E + NDL+LLSKE+
Sbjct: 82 ECRAQILRGDEEEGARQCHMVAVIQCERVNEFHFVKLAIDAGECQEYYENDLVLLSKEQA 141
Query: 134 ------FKEGS---------------------TFPTTYAFALVEHCQAN-LLRLRMYLAG 165
F + S P+TYA A VE + LR+RMYL
Sbjct: 142 CLRELLFTDRSHHLYSLDAAEVFTTNAKLGQGKLPSTYALANVESREGQQALRIRMYLDK 201
Query: 166 EV---IHINKDAVKSQRLLNIHSLITSSVSAVEKRLFSLKICSLSTIAREYLALRSVGSL 222
E I I DA S ++L +S+S + + LK+C++STI+REY +LRSVG+L
Sbjct: 202 EAETGISIENDA--SDKVL-------ASLSGPKTAWWILKLCNMSTISREYTSLRSVGTL 252
Query: 223 PFKDLILSAS-----EKSSGSQDQSWKIPGLLHEYIKENHNASQLEAIHEGLLRKAFVLI 277
PF ILSAS + S W IP L +++ HN SQL+AI G R VLI
Sbjct: 253 PFVKTILSASLVESDDPESAKDSGQWTIPPSLLDHLNHTHNVSQLQAIQAGCSRDPLVLI 312
Query: 278 QG-----------PPGTGKTQTILGL------------LSAILHATPARVHSKGGLREIK 314
Q P + T GL LS A H G + I+
Sbjct: 313 QVLPFSLHRPFVLPVNESRFVTFCGLYRPGHLEQARHKLSLAFSALFCTPHRNGDV-SIQ 371
Query: 315 RGPELPMHEKYNHWGRASPWL-VGANPRDNIMPIDGDDGFFPTTGNELKPEVVNSSRRYR 373
EL ++ +HW +ASPWL NPRD IMP+DGDDGFFPT+ N+ +PE + + R++R
Sbjct: 372 HKLELTSTKRMDHWIKASPWLNESVNPRDLIMPMDGDDGFFPTSTNQFRPESIAAKRKHR 431
Query: 374 VRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQK 433
VLVCAPSNSALDEIVLRLLNTG+RDEN ++YTP +VR+GL AHHSV++V +D LV Q+
Sbjct: 432 KHVLVCAPSNSALDEIVLRLLNTGLRDENGQAYTPNVVRVGLNAHHSVSAVTMDTLVNQR 491
Query: 434 RDD------SAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVV 487
SA K G +RD R +IL+EA IVCSTLSFSG+ + ++N GFDVV
Sbjct: 492 LSGVQKSVVSAGPKASAGM---ERDRCRISILDEAAIVCSTLSFSGAGVFLRMNRGFDVV 548
Query: 488 IIDEAAQAVEPATLVPLATGCKQVFL------------------VGDPVQLPATVISPVA 529
IIDEAAQAVEP+TLVPL GC+QV VGDP+QLPATV+S A
Sbjct: 549 IIDEAAQAVEPSTLVPLVHGCRQVLASKVAELSFASLEFHMTMQVGDPLQLPATVLSTKA 608
Query: 530 EHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDW 589
GYG S+FKRLQ+AGYPVKMLKTQYRMHP +R+FPS+EFY+ ALEDG DVE T+R W
Sbjct: 609 VSHGYGMSMFKRLQKAGYPVKMLKTQYRMHPLIRAFPSKEFYEGALEDGDDVERVTSRPW 668
Query: 590 HEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAII 649
HE+RCFGP++FFDI +G+ESQP GSGSW+N DEV+FVL+L+ L+++YP+LK S +A+I
Sbjct: 669 HEHRCFGPYTFFDI-DGEESQPPGSGSWVNKDEVEFVLVLYRHLVALYPELKGSPTVAVI 727
Query: 650 SPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLAD 709
SPY+ QVK ++RF E G E+ ++VDI TVDG QGREKD+AIFSCVRA++ KSIGF++D
Sbjct: 728 SPYKLQVKLLRQRFTEVLGKETARLVDINTVDGFQGREKDIAIFSCVRATEGKSIGFVSD 787
Query: 710 YRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRVSKPYASFFSDENLE 769
+RRMNVG+TRA++S+LVVGCA L+ DKHW NLV S+ ++ L++V+KP+ + F+D++LE
Sbjct: 788 FRRMNVGLTRARASMLVVGCAKALKIDKHWRNLVTSSIERHRLYKVTKPFHALFNDQSLE 847
Query: 770 SMRKNA 775
+M+K A
Sbjct: 848 NMKKLA 853
>gi|296089915|emb|CBI39734.3| unnamed protein product [Vitis vinifera]
Length = 663
Score = 711 bits (1834), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/515 (70%), Positives = 421/515 (81%), Gaps = 8/515 (1%)
Query: 3 VDKDKPQDEASIFRFCKIILGWDYFRLVKESQERNDKNSKKVDRGKL-GLREVKDTYKDV 61
VDK ++EA I RFCKI+LGWDY +L+KES+ KNS+ + G GLR+VKDTY D+
Sbjct: 4 VDKKSLEEEACILRFCKIVLGWDYVQLLKESK----KNSRNIGDGSAPGLRKVKDTYTDI 59
Query: 62 DDYLATFEPLLFEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADEVESI 121
DDYLATFEPLLFEEVKAQI+Q +DEEEV EWK +V EC E DGF +P V Y+A+E ESI
Sbjct: 60 DDYLATFEPLLFEEVKAQIVQGRDEEEVSEWKFAIVRECSETDGFSIPVVGYKAEEGESI 119
Query: 122 SPNDLLLLSKEEFKEGSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKS-QRL 180
S NDLLLLSK +F+EG+ PTTYAFAL EH Q +LLR+RM+L GEV IN D V S RL
Sbjct: 120 SQNDLLLLSKTKFQEGTRLPTTYAFALAEHRQGDLLRVRMWLDGEVKGINTDEVVSCPRL 179
Query: 181 LNIHSLITSSVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQD 240
L++HSLI + ++ + L+ LKICSLSTI REY+ L+S+GSLPFKDLIL+A++ S +
Sbjct: 180 LSMHSLIGNLINDPNRGLYILKICSLSTIVREYIGLQSIGSLPFKDLILTATDSSPSPGE 239
Query: 241 QSWKIPGLLHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHAT 300
QSWKIP L E+I+ NHN SQL AIH L RKAFVLIQGPPGTGKTQTILGLLSAILHAT
Sbjct: 240 QSWKIPRPLMEFIETNHNESQLAAIHASLSRKAFVLIQGPPGTGKTQTILGLLSAILHAT 299
Query: 301 PARVHSKGGLREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNE 360
PARVHS+GGL EIKRGP LP+ EKY WG+ASPWL G NPRD I+P DGDDG FPTTGNE
Sbjct: 300 PARVHSRGGLSEIKRGPYLPLQEKYVMWGQASPWLTGINPRDEIVPKDGDDGVFPTTGNE 359
Query: 361 LKPEVVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHS 420
LKPE+V SSR+YRVRVLVCAPSNSALDEIVLRLLNTG+RDEN +Y PKIVRIGLK HHS
Sbjct: 360 LKPEIVTSSRKYRVRVLVCAPSNSALDEIVLRLLNTGVRDENDHAYNPKIVRIGLKPHHS 419
Query: 421 VNSVAIDHLVEQKRD--DSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLS 478
V +V++D+LVEQK +S +DKQKHGA +DRDS+RS+IL+EA IV STLSFSGS+L S
Sbjct: 420 VRAVSMDYLVEQKLSSMNSTSDKQKHGAAGRDRDSVRSSILSEAAIVFSTLSFSGSSLFS 479
Query: 479 KLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFL 513
KLN GFDVVIIDEAAQAVEPATLVPLA GCKQVFL
Sbjct: 480 KLNSGFDVVIIDEAAQAVEPATLVPLANGCKQVFL 514
>gi|302789261|ref|XP_002976399.1| hypothetical protein SELMODRAFT_30768 [Selaginella moellendorffii]
gi|300156029|gb|EFJ22659.1| hypothetical protein SELMODRAFT_30768 [Selaginella moellendorffii]
Length = 766
Score = 701 bits (1810), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/801 (47%), Positives = 524/801 (65%), Gaps = 71/801 (8%)
Query: 19 KIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKA 78
KI+L WDY +L+ +Q + ++ S V L V T+ ++DY+A FEPLL EE +A
Sbjct: 11 KILLRWDYIQLL--AQSKVNRVSAPV------LPTVPQTFASLEDYIAVFEPLLLEECRA 62
Query: 79 QIIQKKDE--EEVQEWKLRLVMECGEADGFHLPSVTYEADEVESISPNDLLLLSKEEFKE 136
QI++ D+ + E + + C + + F+ V A+ E N+L+L++KE
Sbjct: 63 QIVRGDDDGGKSAAECHVAALTHCEKVNEFYSAKVAVRAEIGELFPDNELILITKEPLG- 121
Query: 137 GSTFPTTYAFALVE-HCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHS-----LITSS 190
G+ P TYA A+V+ H +L LR+YL + + ++DA L S L+ S
Sbjct: 122 GADLPKTYALAMVDGHEGLQILSLRLYLESDSSN-DRDARLRLALQASGSGKRADLLFSV 180
Query: 191 VSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSAS--EKSSGSQDQSWKIPGL 248
+ + LFS ++C+LSTI+REY+AL S+GS+ F D I+SAS + S+G + IP
Sbjct: 181 FFSFLQSLFS-QLCNLSTISREYVALCSLGSIAFSDTIVSASASDVSAGCR----TIPRG 235
Query: 249 LHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKG 308
L +Y++ HN SQ+ AI GL + VLIQ G
Sbjct: 236 LKDYLQTTHNQSQINAIQAGLSGQPLVLIQ----NGHCLC-------------------- 271
Query: 309 GLREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNS 368
+ +HW +ASPWL NPRD IMP DGDDGFFP N+ + EVV +
Sbjct: 272 ---------------RLDHWLKASPWLGVGNPRDLIMPEDGDDGFFPCAPNQFRAEVVGT 316
Query: 369 SRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDH 428
+R++R VLVCAPSNSALDEIVLRLL +GIRDEN SY P IVR+GL AHHSV SV +DH
Sbjct: 317 TRKHRAHVLVCAPSNSALDEIVLRLLKSGIRDENGDSYVPSIVRMGLNAHHSVQSVCMDH 376
Query: 429 LVEQKRD--DSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDV 486
LV+Q+ D + + G ++R+ +R AIL EA IVCSTLSFSGS++ S++ GFDV
Sbjct: 377 LVDQRLQSIDRSMSSARGGGGGRERERVRLAILEEAAIVCSTLSFSGSSVFSRMKRGFDV 436
Query: 487 VIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAG 546
V+IDEAAQAVEP+TLVPL GCKQ FLVGDP+QLPATV+S A GYGTS+FKR Q+AG
Sbjct: 437 VVIDEAAQAVEPSTLVPLTHGCKQAFLVGDPIQLPATVLSTEAVKHGYGTSMFKRFQKAG 496
Query: 547 YPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEG 606
YPV+ML TQYRMHP++R FPS+EFY EALEDG++VE T+R WHEY CFGPF+FFDI EG
Sbjct: 497 YPVQMLNTQYRMHPQIRDFPSKEFYGEALEDGAEVEQQTSRAWHEYCCFGPFAFFDI-EG 555
Query: 607 KESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKET 666
+E+QP GSGS+IN DE +FVL+L+ LI++YP+LK +A+ISPY++QV + RF E
Sbjct: 556 RETQPPGSGSYINSDEAEFVLVLYRHLIALYPELKGGPHVAVISPYKYQVTTLRTRFAEV 615
Query: 667 FGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILV 726
G ++ +++DI TVDG QGREKD+AIFSCVRA+ K IGF++D+RRMNVG+TRA++S+LV
Sbjct: 616 LGKDAARLIDINTVDGFQGREKDIAIFSCVRANKSKGIGFVSDFRRMNVGLTRARASMLV 675
Query: 727 VGCASTLREDKHWNNLVKSAEKQDCLFR-VSKPYASFFSDENLESMRK--NATTDNVQGA 783
VGCA+ LR+D+HW NL+K A++++ +F+ V KPY + F++ +L + +K + VQ
Sbjct: 676 VGCAAALRQDEHWGNLIKHAQQRNRMFKVVQKPYHALFNEASLAATKKMSDGPPLPVQEG 735
Query: 784 DGHVPHDDETMHYANTGDADQ 804
D + HY + G+A+Q
Sbjct: 736 DAMEVEMELPSHY-DLGEAEQ 755
>gi|2244913|emb|CAB10335.1| SEN1 like protein [Arabidopsis thaliana]
gi|7268305|emb|CAB78599.1| SEN1 like protein [Arabidopsis thaliana]
Length = 555
Score = 694 bits (1792), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/576 (61%), Positives = 422/576 (73%), Gaps = 92/576 (15%)
Query: 268 GLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLREIKRGPELPMHEKYNH 327
GL RK+FVLIQGPPGTGKTQTIL +L AI+HATPARV SKG E+KRG ++ + EKYNH
Sbjct: 2 GLSRKSFVLIQGPPGTGKTQTILSILGAIMHATPARVQSKGTDHEVKRGIQMTIQEKYNH 61
Query: 328 WGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNSSRRYRVRVLVCAPSNSALD 387
WGRASPW++G NPRD IMP DGDDGFFPT+GNELKPEVVN+SR+YR+RVLVCAPSNSALD
Sbjct: 62 WGRASPWILGVNPRDAIMPEDGDDGFFPTSGNELKPEVVNASRKYRLRVLVCAPSNSALD 121
Query: 388 EIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQKRDDSAADKQKHGAT 447
EIVLRLL++G+RDEN ++YTPKIVRIGLKAHHSV SV++DHLV QKR SA DK K G T
Sbjct: 122 EIVLRLLSSGLRDENAQTYTPKIVRIGLKAHHSVASVSLDHLVAQKR-GSAIDKPKQGTT 180
Query: 448 RKDRDSIRSAILNEAVIVC---------STLSFSGSALLSKLNHGFDVVIIDEAAQAVEP 498
D DSIR+AIL EA IV +TLSFSGSALL+K N GFDVVIIDEAAQAVEP
Sbjct: 181 GTDIDSIRTAILEEAAIVWGFNFRINVFATLSFSGSALLAKSNRGFDVVIIDEAAQAVEP 240
Query: 499 ATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRM 558
ATL+PLAT CKQVFLVGDP QLPATVIS VA+ GYGTS+F+RLQ+AGYPVKMLKTQYRM
Sbjct: 241 ATLIPLATRCKQVFLVGDPKQLPATVISTVAQDSGYGTSMFERLQKAGYPVKMLKTQYRM 300
Query: 559 HPE------------------------------------VRSFPSREFYDEALEDGSDVE 582
HPE +RSFPS++FY+ ALEDGSD+E
Sbjct: 301 HPELIPISQTKPKIVVSLILTPMIASYFTLQTIFLTENQIRSFPSKQFYEGALEDGSDIE 360
Query: 583 DYTTRDWHEYRCFGPFSFFDIHEGKESQ-PAGSGSWINIDEVDFVLLLFHKLISMYPQLK 641
TTRDWH+YRCFGPF FFDIHEGKESQ P +GS +N+DEV+FVLL++H+L++MYP+LK
Sbjct: 361 AQTTRDWHKYRCFGPFCFFDIHEGKESQHPGATGSRVNLDEVEFVLLIYHRLVTMYPELK 420
Query: 642 SSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDK 701
SSSQLAIISPY +QVK F++RFKE FG E++KVVDI TVDG Q
Sbjct: 421 SSSQLAIISPYNYQVKTFKDRFKEMFGTEAEKVVDINTVDGFQ----------------- 463
Query: 702 KSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRVSKPYAS 761
VVG A+TL+ D W NL++SAE+++ LF+VSKP +
Sbjct: 464 ------------------------VVGSAATLKSDPLWKNLIESAEQRNRLFKVSKPLNN 499
Query: 762 FFSDENLESMRKNATTDNVQGADGHVPHDDETMHYA 797
FFS+ENLE+M+ T++++ D + ++DE++ A
Sbjct: 500 FFSEENLETMK---LTEDMEIPDAPL-YEDESLPVA 531
>gi|384247387|gb|EIE20874.1| hypothetical protein COCSUDRAFT_48445 [Coccomyxa subellipsoidea
C-169]
Length = 863
Score = 558 bits (1437), Expect = e-156, Method: Compositional matrix adjust.
Identities = 330/795 (41%), Positives = 443/795 (55%), Gaps = 84/795 (10%)
Query: 19 KIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKA 78
++ L WDY+ L + + L + +++ +DY+ F PL+ EE+ A
Sbjct: 15 RVFLAWDYWELADRAGADGGVTKE--------LEALPQSFESAEDYIFRFAPLVLEELGA 66
Query: 79 QIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADEVESISPNDLLLLSKEEFKEGS 138
I+Q DE + + ++ + D F + + A + ND +LLSK++ +
Sbjct: 67 LILQGSDEGVMFQPHPAVLAAYKQTDDFLIARLALPAGVASTFRDNDAILLSKDDPNDED 126
Query: 139 TFPTTYAFALVEHCQA-NLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSAVEKR 197
+A VE + L + YL+ + N ++ R + + +S
Sbjct: 127 AIGQLHALGKVEGREGEQSLSVCFYLSDDSQAGNPAGMQRVRAMR------AGLSTANSC 180
Query: 198 LFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIKENH 257
F L++C+LST+ RE+ AL + SL FKD++LSA + Q+ IP + + ++ +
Sbjct: 181 WFLLRLCNLSTLIREWTALHAFPSLSFKDVLLSAKPPLKDGK-QALCIPQRVQQAMEAEY 239
Query: 258 NASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLREIKRGP 317
N SQ+ A+ GL R VLIQGPPGTGKT+TILGLLS ILHA PA HS G IKR P
Sbjct: 240 NESQMSAVTAGLDRSPVVLIQGPPGTGKTRTILGLLSIILHAAPA--HSAG---LIKRAP 294
Query: 318 ELPMHEKYNH-----WGRASPWLVG-ANPRDNIMPIDGDD--GFFPTTGNELKPEV-VNS 368
PM E W A+PWL G A+PRD++ D + G F + +P V V
Sbjct: 295 AAPMPEYVTDDVRRLWRSAAPWLAGSADPRDDVFGRDAESERGTFGLL--DTRPPVRVGQ 352
Query: 369 SRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDH 428
+ + VLVCAPSNSALDEIV RLL G+ D Y P IVR+GL HHSV +V++D
Sbjct: 353 AVGPKAHVLVCAPSNSALDEIVSRLLQAGLLDWQGNRYIPSIVRVGLSVHHSVEAVSLDA 412
Query: 429 LVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVI 488
L Q + +A RD I+ +IL EA IVCSTLSFSGS L ++++ FDVV+
Sbjct: 413 LGGQASNPAA------------RDRIKLSILEEAHIVCSTLSFSGSGLFARMSRPFDVVV 460
Query: 489 IDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYP 548
IDEAAQAVEP+TLVPL TGC QV+LVGDPVQLPATVIS A GY SLFKRLQ +G+P
Sbjct: 461 IDEAAQAVEPSTLVPLVTGCHQVYLVGDPVQLPATVISSRAVEHGYDKSLFKRLQSSGFP 520
Query: 549 V-------------------------------------KMLKTQYRMHPEVRSFPSREFY 571
V KML TQYRMHP + +FPS EFY
Sbjct: 521 VQASPQGSPTQNQLDESRPAPCNACYSMVSTTIPKLPCKMLDTQYRMHPAISAFPSAEFY 580
Query: 572 DEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFH 631
+L DG E TTR WHE+ CFGP + F + G+E G+ S IN E + VL ++
Sbjct: 581 QGSLRDGEGTEASTTRAWHEHACFGPLALFQV-AGREMVEEGATSIINKQEAEMVLCIYR 639
Query: 632 KLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVA 691
+L+S YP L++S Q+AIISPY QVK + +F E G E + +VD+ T+DG QGREKD+
Sbjct: 640 ELVSRYPHLRTSHQVAIISPYSAQVKLLRAKFVEALGAEGRHLVDVNTIDGFQGREKDIV 699
Query: 692 IFSCVRASD--KKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQ 749
IFS VR+S K IGF+AD RR+NV +TRA++S+LVV L D HW NLVK A
Sbjct: 700 IFSAVRSSTQRKGKIGFVADERRVNVALTRARASLLVVANFKVLERDGHWRNLVKHATAN 759
Query: 750 DCLFRVSKPYASFFS 764
CL+ KP+ F S
Sbjct: 760 KCLYVPQKPFVDFLS 774
>gi|449525365|ref|XP_004169688.1| PREDICTED: probable helicase MAGATAMA 3-like, partial [Cucumis
sativus]
Length = 497
Score = 514 bits (1324), Expect = e-143, Method: Compositional matrix adjust.
Identities = 257/360 (71%), Positives = 300/360 (83%), Gaps = 1/360 (0%)
Query: 202 KICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIKENHNASQ 261
KICSLSTI REY+AL S+ SLPFK++IL+A++K++G +DQ+WKI L +Y++EN N SQ
Sbjct: 139 KICSLSTIIREYIALWSISSLPFKEMILAATDKNTG-KDQAWKISKPLQDYMQENLNESQ 197
Query: 262 LEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLREIKRGPELPM 321
A+ GL RK FVLIQGPPGTGKTQTILGLLSAILHATPAR+HS GL E + G ELP+
Sbjct: 198 QAAVQAGLSRKPFVLIQGPPGTGKTQTILGLLSAILHATPARMHSTIGLIETRHGSELPV 257
Query: 322 HEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNSSRRYRVRVLVCAP 381
EKY+HW +ASPWL G NPRD++MP++GDDGFFPT+GNELKPEVV S+R+YRVRVLVCAP
Sbjct: 258 REKYDHWNQASPWLNGINPRDDLMPVNGDDGFFPTSGNELKPEVVKSNRKYRVRVLVCAP 317
Query: 382 SNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQKRDDSAADK 441
SNSALDEIVLR+ NTG+RDEN YTPKIVRIGLK H S+ +V++ LVEQK+++ + K
Sbjct: 318 SNSALDEIVLRVQNTGVRDENDHPYTPKIVRIGLKPHPSIKAVSMKELVEQKKNNMSMGK 377
Query: 442 QKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATL 501
+K GA+ D DSIRSAIL+E+VIV STLSFSGS+L SK N GFDVVIIDEAAQAVE ATL
Sbjct: 378 EKSGASGTDLDSIRSAILDESVIVFSTLSFSGSSLFSKWNRGFDVVIIDEAAQAVELATL 437
Query: 502 VPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPE 561
VPLA GCKQVFLVGDP QLPATVIS A+ GY SLFKR Q AGYPV MLK QYRMHPE
Sbjct: 438 VPLANGCKQVFLVGDPEQLPATVISTTAKKFGYDKSLFKRFQTAGYPVTMLKIQYRMHPE 497
Score = 156 bits (394), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 80/153 (52%), Positives = 101/153 (66%), Gaps = 12/153 (7%)
Query: 1 MAVDKDKPQDEASIFRFCKIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKD 60
MAVDK+K +E+ R KIIL WDYFRL+K S++R + + D LGL+EVK TYKD
Sbjct: 1 MAVDKEKAVEESVTSRLFKIILSWDYFRLLKNSKKRKENDG---DGASLGLKEVKSTYKD 57
Query: 61 VDDYLATFEPLLFEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADE--- 117
VDDY +TFEPLL EE+KAQIIQ+ ++EE +WK R +MEC E +GFH P + Y DE
Sbjct: 58 VDDYTSTFEPLLLEEIKAQIIQRNEDEEASDWKFRAIMECSEVNGFHFPEMVYLRDEDLK 117
Query: 118 ------VESISPNDLLLLSKEEFKEGSTFPTTY 144
+ +SPNDLLLLSKE+ ST Y
Sbjct: 118 DEDSEKGDFLSPNDLLLLSKEKICSLSTIIREY 150
>gi|255081534|ref|XP_002507989.1| predicted protein [Micromonas sp. RCC299]
gi|226523265|gb|ACO69247.1| predicted protein [Micromonas sp. RCC299]
Length = 1002
Score = 510 bits (1313), Expect = e-141, Method: Compositional matrix adjust.
Identities = 314/829 (37%), Positives = 450/829 (54%), Gaps = 94/829 (11%)
Query: 9 QDEASIFRFCKIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATF 68
Q + + R + IL WDY+R+ E D R LREV T+ +++YL F
Sbjct: 7 QQTSHLSRLQQEILAWDYYRMGGE-----DDPGAAAGRT---LREVPKTFASINEYLDVF 58
Query: 69 EPLLFEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADEVESISPNDLLL 128
EPL+ EE AQ+ + +E + + + V+ DGFH+ + + NDL+L
Sbjct: 59 EPLVLEECAAQVC-RGEEGDARPSNVAAVLSSERVDGFHVVKFVLGEEAMREFRDNDLIL 117
Query: 129 LSKEEF-------------------------------------------KEGSTFPTTYA 145
+K + + S + YA
Sbjct: 118 AAKTDPAPDAETKTTGKGDKDKAVEEKNASAGGKKDKKGDAKEDADGDDERASVYENMYA 177
Query: 146 FALVEHCQA-NLLRLRMYL----AGEVIHINKDAVKSQRLLNIHSLITSSVSAVEKRLFS 200
V+ + N++R+R +L G+ + + A+ S+ ++++ +K +
Sbjct: 178 LGFVDGRDSRNVMRVRFHLPEAGGGQGVFKRRAALTDDDFTRFRSM-RNALATPKKAWYL 236
Query: 201 LKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIKENHNA- 259
+ + ++STIARE+LAL + +LPF IL + + SW++P L + I+ +NA
Sbjct: 237 MHLANMSTIAREWLALHAFPALPFAHTILGGKPAAKAAH-SSWELPEPLSKAIESAYNAD 295
Query: 260 SQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLREI------ 313
SQL A+ L ++ LIQGPPGTGKT+ IL LLS ILHA P K G +EI
Sbjct: 296 SQLTALKAALEKQPITLIQGPPGTGKTRIILSLLSVILHAVPG---VKSG-QEIDLKRFL 351
Query: 314 ----KRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNSS 369
+R P P H RA+PW+ G + P D P E V +
Sbjct: 352 ETRDERKPLSPAENASVHR-RAAPWMRGVLNPRDAPPPPRDAPPVPPPPPEKPEVVGETE 410
Query: 370 RRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHL 429
R R +VLVCAPSNSALDEIVLR++ +G+ N Y+P +VR+G+ HHSV SV+++ L
Sbjct: 411 NR-RTKVLVCAPSNSALDEIVLRIMQSGLLGPNGSPYSPTLVRVGVNVHHSVESVSMEAL 469
Query: 430 VEQKRDD------------SAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALL 477
V ++ + ++++K+ A KDR ++ AIL+EA +VCSTLSFSGS +
Sbjct: 470 VRERVGEVGDKVAAAAAAAASSEKKFERALEKDR--VKLAILDEAAVVCSTLSFSGSGMF 527
Query: 478 SKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTS 537
+++ FDVV+IDEAAQAVEP+TLVPL G KQVFLVGDP QLPATV+S +A Y S
Sbjct: 528 ARMTRQFDVVVIDEAAQAVEPSTLVPLCYGAKQVFLVGDPRQLPATVLSSIATDHNYDQS 587
Query: 538 LFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGP 597
LFKR ++ GYP+ +LKTQYRMHP +R FPS +FY LEDG + T R WH+ F P
Sbjct: 588 LFKRFEQCGYPIHLLKTQYRMHPAIREFPSTQFYSGELEDGPKMAAKTKRPWHDNMLFRP 647
Query: 598 FSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVK 657
F F D+ GKE Q G SW N DE + L L+ Y +L S ++ +ISPY+ QVK
Sbjct: 648 FVFIDV-AGKEYQ-GGGMSWANDDEATLAVALVATLVKNYAELASGEKIGVISPYKAQVK 705
Query: 658 QFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDK-KSIGFLADYRRMNVG 716
+ R ET G E + VD+ ++DG QGREKDV IFS VRA K + +GF+AD RR+NVG
Sbjct: 706 NIRRRLAETLGEERARKVDVNSIDGFQGREKDVCIFSVVRAPAKGRGLGFVADERRINVG 765
Query: 717 ITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRV-SKPYASFFS 764
+TR+KSS++V+G A L+ D +W LV SA ++ + + K Y +F +
Sbjct: 766 LTRSKSSLIVLGSAKALKGDDNWGGLVASARDRNLIVKPGGKDYKAFVA 814
>gi|308807350|ref|XP_003080986.1| tRNA-splicing endonuclease positive effector-related (ISS)
[Ostreococcus tauri]
gi|116059447|emb|CAL55154.1| tRNA-splicing endonuclease positive effector-related (ISS)
[Ostreococcus tauri]
Length = 958
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 307/765 (40%), Positives = 437/765 (57%), Gaps = 58/765 (7%)
Query: 52 REVKDTYKDVDDYLATFEPLLFEEVKAQIIQKKDEE-------EVQEWKLRLVMECGEAD 104
R V T++ +Y TFEPLLF E A I ++ E+ + V +D
Sbjct: 81 RTVPMTFRSAREYAETFEPLLFAECAA--IARRGEDVEREERRGGGRSRAARVKTTTRSD 138
Query: 105 GFHLPSVTYEADEVESIS--PNDLLLLSKEEFKEGSTFPT---------TYAFALVEHCQ 153
FHL VT+E E +++ +DL+ +SK + + S T+A +V+
Sbjct: 139 EFHL--VTFELSEADAMEFYDDDLVFVSKADAGDASEAELKKCEERAGETHALGIVDGRD 196
Query: 154 A-NLLRLRMYLA-----------GEVIHINKDAVKSQRLLNIHSLITSSVSAVEKRLFSL 201
A +R+RMYL GE A+ + S + +S+ + L
Sbjct: 197 AKTCVRVRMYLPDASSGDSRSTQGETKLDASAALAERDAKRFRSTRNALMSSKHDETWYL 256
Query: 202 K-ICSLSTIAREYLALRSVGSLPFKDLIL---SASEKSSGSQDQSWKIPGLLHEYIKENH 257
K I +LSTI RE+ A+ + SLP+ IL A+E + + +W I L ++ +
Sbjct: 257 KNIAALSTITREWRAVHELSSLPYASTILKGAPAAEAGAPAAANAWAISDALRNVMEHAY 316
Query: 258 NASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSK----GGLREI 313
N SQ++A+ L + FVLIQGPPGTGKT+TIL LLS +LH+ P+ EI
Sbjct: 317 NESQVKAMSTALSQDPFVLIQGPPGTGKTRTILSLLSVLLHSVPSTSSRNTVDFASYAEI 376
Query: 314 KRGPE-LPMHEKYNHWGRASPWLVGA-NPRD---NIMPIDGDDGFF-PTTGNELKPEVVN 367
+ E + + W ASPWL G NPRD I G +G P + ++ + +
Sbjct: 377 REAREKMSSEQTRRAWRLASPWLNGVENPRDAPPTISLASGGEGVAKPPSKRKVIAQSLG 436
Query: 368 SSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAID 427
+ R ++L+CAPSNSALDEIVLR++ G+ D +Y+P IVR+G+ HHSV V +D
Sbjct: 437 THTYKRSKILICAPSNSALDEIVLRIMRNGLVDGAGATYSPTIVRVGVNVHHSVKQVHMD 496
Query: 428 HLVEQKRDDSAA--DKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFD 485
L+ Q+ + A D + +RD ++ AIL EA +VCSTLSFSGS + S+++ FD
Sbjct: 497 TLISQRLGELGAHLDSVRRFEAAIERDRLKQAILEEASVVCSTLSFSGSGMFSRMSKTFD 556
Query: 486 VVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRA 545
VIIDEAAQAVEP+TL+PL +G KQVFLVGDP QLPATV++ +A GY TS+FKR Q
Sbjct: 557 AVIIDEAAQAVEPSTLIPLCSGAKQVFLVGDPRQLPATVLNSIAIDHGYDTSMFKRFQSC 616
Query: 546 GYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHE 605
GYPV +LKTQYRMHP +R FPS FYD L DG ++ TTR WH++ F PF FFD+ +
Sbjct: 617 GYPVHVLKTQYRMHPSIRVFPSMLFYDNELIDGPGLDKLTTRRWHKHSVFRPFVFFDV-K 675
Query: 606 GKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKE 665
GKE AG SW+N +E +F++ L L + +P+L + +A+ISPY+ QV+ + KE
Sbjct: 676 GKERASAGH-SWVNDEESEFIVALVQTLFARFPELIAGEHVAVISPYKAQVRNIRRLIKE 734
Query: 666 TFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDK------KSIGFLADYRRMNVGITR 719
G + VD+ T+DG QG EKD+ IFS VRA + +GF+AD RR+NVG+TR
Sbjct: 735 KLGAKKALRVDVNTIDGFQGHEKDICIFSVVRAPKRGAGSSGGGLGFVADERRINVGLTR 794
Query: 720 AKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRVSKPYASFFS 764
A+SS+ VVG A +++ D W +LV+SA +++C SKPY F +
Sbjct: 795 ARSSLFVVGAAESIKGDDRWGSLVESARRRNCALTPSKPYRDFLN 839
>gi|296089913|emb|CBI39732.3| unnamed protein product [Vitis vinifera]
Length = 332
Score = 469 bits (1207), Expect = e-129, Method: Compositional matrix adjust.
Identities = 217/296 (73%), Positives = 258/296 (87%), Gaps = 1/296 (0%)
Query: 514 VGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDE 573
VGDPVQLPATVISP+AE GYG SLFKR QRAGYPV+MLKTQYRMHPE+RSFPS+EFYDE
Sbjct: 18 VGDPVQLPATVISPIAEKFGYGMSLFKRFQRAGYPVQMLKTQYRMHPEIRSFPSKEFYDE 77
Query: 574 ALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKL 633
ALEDG DV+D T R WH+YRCFGPF FFDIHEGKESQP+GSGSW+N+DEV+FVLL++HKL
Sbjct: 78 ALEDGPDVKDQTVRLWHDYRCFGPFCFFDIHEGKESQPSGSGSWVNVDEVEFVLLMYHKL 137
Query: 634 ISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIF 693
++ YP+LKSSS+LAIISPYRHQVK F+ERF++TFGVES KVVDI TVDG QGREKDVAIF
Sbjct: 138 VTRYPELKSSSRLAIISPYRHQVKLFRERFQDTFGVESDKVVDINTVDGFQGREKDVAIF 197
Query: 694 SCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLF 753
SCVRAS K IGF+AD+RRMNVGITRA++S+LVVG ASTL++D+HWNNL++SAEK++CL
Sbjct: 198 SCVRASKDKGIGFVADFRRMNVGITRARASVLVVGSASTLKKDEHWNNLLESAEKRNCLL 257
Query: 754 RVSKPYASFFSDENLESMRKNATTDNVQGADGHVPHDDETMHYANTGDADQGQADD 809
+VSKPY +FFSDENL+SM + + A+G + D+ Y+N GDA+QGQA D
Sbjct: 258 KVSKPYTAFFSDENLKSMVAKDQS-MPEDAEGGMAVDNNAPIYSNLGDAEQGQAAD 312
>gi|226500364|ref|NP_001146818.1| uncharacterized protein LOC100280423 [Zea mays]
gi|219888873|gb|ACL54811.1| unknown [Zea mays]
Length = 399
Score = 459 bits (1182), Expect = e-126, Method: Compositional matrix adjust.
Identities = 211/349 (60%), Positives = 282/349 (80%), Gaps = 7/349 (2%)
Query: 426 IDHLVEQKRD--DSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHG 483
+D+L++QK D D + GA DR IR++IL+EA IV STLSFSGS++ S++
Sbjct: 1 MDYLIQQKLSGVDRTLDGGRRGAGEYDR--IRASILDEAAIVFSTLSFSGSSIFSRMTRA 58
Query: 484 FDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQ 543
FDVVIIDEAAQAVEPATL+PL GC+Q+FLVGDPVQLPATVIS A+ LGYGTSLFKR Q
Sbjct: 59 FDVVIIDEAAQAVEPATLIPLIHGCRQIFLVGDPVQLPATVISQTAQKLGYGTSLFKRFQ 118
Query: 544 RAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDI 603
AG+PV+MLK QYRMHPE+ +FPS+EFY+ L+DG + R WH Y CFGPF FFD+
Sbjct: 119 AAGFPVQMLKIQYRMHPEISTFPSKEFYEGVLQDGEGLS--RKRPWHSYSCFGPFCFFDV 176
Query: 604 HEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERF 663
+G ESQP+GSGSW+N DEV+F+ LL+H+L YP+LKSS ++ +ISPYRHQVK ++ F
Sbjct: 177 -DGIESQPSGSGSWVNQDEVEFITLLYHQLALRYPELKSSPEVGVISPYRHQVKLLKDSF 235
Query: 664 KETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSS 723
+ TFG +S++++D++TVDG QGREK++ IFSCVR + ++ IGF++D+RRMNV ITRAKS+
Sbjct: 236 RSTFGDQSRELIDVSTVDGFQGREKEIVIFSCVRCNKEQKIGFVSDFRRMNVAITRAKSA 295
Query: 724 ILVVGCASTLREDKHWNNLVKSAEKQDCLFRVSKPYASFFSDENLESMR 772
+LVVG ASTL++DKHWNNLV+SA++++CLF+V KP +FF+++NL++M+
Sbjct: 296 VLVVGSASTLKQDKHWNNLVESAKERNCLFKVPKPLTAFFAEDNLKTMK 344
>gi|328867998|gb|EGG16379.1| DNA2/NAM7 helicase family protein [Dictyostelium fasciculatum]
Length = 917
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 296/835 (35%), Positives = 430/835 (51%), Gaps = 123/835 (14%)
Query: 6 DKPQDEASIFR-FCKIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDY 64
DKP + + F K +L WD R+ + ++ LR V+ T+ D +DY
Sbjct: 34 DKPLNNDQVLAIFYKKVLSWDASRIHRMTER---------------LRPVRATFTDKNDY 78
Query: 65 LATFEPLLFEEVKAQIIQKKDEEEVQEW-----KLRLVME-----------CGEADGF-- 106
+ TFEPL+ EE +AQ+ + EE Q ++R + E EAD F
Sbjct: 79 IQTFEPLILEECRAQLERAIHEENEQVSTPTISRVRYISENNDYLEVGLTFAAEADAFQF 138
Query: 107 ----------HLP---------------------------SVTYEADEVESISPNDLLLL 129
H P ++T +A V PN +++
Sbjct: 139 HENDLMMVSLHHPMLIFGGSLEDEMTDSEYEDEDEDGNPITITPKAPVVPEEDPNKVVMT 198
Query: 130 SKEEFKEGSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLL-NIHSLIT 188
K+ P + E+ ++L G V +K + L NIH
Sbjct: 199 DDLLKKKKRVIPLSRTPVTEEN-------KYLHLIGTVEQFETGGIKVKFCLKNIHDDRG 251
Query: 189 SSVSAV---EKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKI 245
++ + E ++ K+C+LSTI RE+LAL + F +L ++ +G+ S KI
Sbjct: 252 RQMNLLLRYEMDWWTTKLCNLSTIQREFLALYLTSNTSFMKTLLLTDDQENGA---SMKI 308
Query: 246 PGLLHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVH 305
P +L++ K+ N+SQ A+ L K LIQGPPGTGKT ILGL+S +LH+T
Sbjct: 309 PPILYDKFKQAFNSSQFSALEAALEGKNITLIQGPPGTGKTHVILGLISVLLHSTEIPKE 368
Query: 306 SKGGLREIK-RGPELPMHEKYNHWGRASPWLVG--ANPRDNIMPIDGDDGFFPTTGNELK 362
++ + ++ + ++ HEK W A PW + RDN D D F + K
Sbjct: 369 TEQFVNQLSIQSSQIMDHEKEKWWNIAQPWFNEQVKHKRDNF---DLIDYTFEEKEEKRK 425
Query: 363 PEVVNSSRRY--------RVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIG 414
++ R + R+L+CAPSN A+DEIV RL+ G + + Y P IVR+G
Sbjct: 426 RDLWRKLRETGSIREPPRKRRILLCAPSNGAVDEIVGRLIRDGCLNHEGKKYQPNIVRVG 485
Query: 415 LKAHHSVNSVAIDHLV---EQKRDDSAA---------DKQKHGATRKDRDSIRSAILNEA 462
+ V V ++++V +Q + + A D +SIRS IL++A
Sbjct: 486 PGSQMDVERVTLEYMVRCRQQLMNSNTAMPSSSAATAAATTSSKGNMDTNSIRSIILDDA 545
Query: 463 VIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPA 522
I+ +TLSFSGS+LL+K+N GFD+VIIDEAAQAVE +TLVP+ CK++ LVGDP QLPA
Sbjct: 546 EIIATTLSFSGSSLLTKMN-GFDIVIIDEAAQAVETSTLVPIQHKCKKIILVGDPKQLPA 604
Query: 523 TVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVE 582
T+ISP+A Y SLF+RLQ P+ ML TQYRMH +R FPSR FY++ LEDG ++
Sbjct: 605 TIISPIAIKYKYDQSLFQRLQEKCPPL-MLTTQYRMHSTIRQFPSRHFYNDLLEDGPNIA 663
Query: 583 DYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKS 642
D T ++H FGP F+D+ +E + G GS N DE + L+ ++ YP+
Sbjct: 664 DRAT-NYHGNSFFGPLVFYDLPFAREIK-HGGGSVFNEDECFMAIYLYQLILRTYPEQDF 721
Query: 643 SSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKK 702
+ ++ IISPYR QV +E FK G + I TVDG QGRE+++ IFSCVRASD++
Sbjct: 722 TGRIGIISPYRQQVLTLREFFKNCPG------ISIDTVDGFQGREREIIIFSCVRASDQE 775
Query: 703 --SIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRV 755
IGFLAD RRMNV +TR +SS+LV+G A TL +K WN L+K + +CL +
Sbjct: 776 GAGIGFLADVRRMNVALTRPRSSLLVIGNAKTLSINKDWNELIKHCQSNNCLVPI 830
>gi|330841718|ref|XP_003292839.1| hypothetical protein DICPUDRAFT_50668 [Dictyostelium purpureum]
gi|325076881|gb|EGC30633.1| hypothetical protein DICPUDRAFT_50668 [Dictyostelium purpureum]
Length = 938
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 298/840 (35%), Positives = 425/840 (50%), Gaps = 146/840 (17%)
Query: 16 RFCKIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEE 75
+F K IL W+ L + +E L++VK ++ D DY++TFEPLLFEE
Sbjct: 31 QFYKHILTWNAADLQPKRKE---------------LKKVKVSFDDEKDYVSTFEPLLFEE 75
Query: 76 VKAQI---IQKKDEEEVQEWKLRLVMECGEADGF-------------------------- 106
+AQ+ I++ ++++ E L V EA+ F
Sbjct: 76 CRAQLERSIEEGEKDDTSEPCLSRVRYISEANDFLIVGLVMSEGVNVFQFHDNDLIMISL 135
Query: 107 HLPSVTYEADEVESIS--------------PNDLL--------------LLSKEEFKEGS 138
H P V + DE E I+ P D + + E K+
Sbjct: 136 HHPLVVFGMDENEEITDDEDTAATSAATHVPADSIKTTTASEDIDDPNKTIEDAERKKKK 195
Query: 139 TFP-----------TTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLI 187
P T + VEH + ++ + YL G +KS+R L+
Sbjct: 196 VIPPSKTPITDQNRTLHLIGTVEHLENGGIKAKFYLKG---------IKSERARQCGLLL 246
Query: 188 TSSVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPG 247
+ ++ K+C+LST+ REY+AL S F +L E + Q KIP
Sbjct: 247 RYEID-----WWTTKLCNLSTLQREYVALYSTSQSGFMKTLLLRDEDDN--QGIVMKIPP 299
Query: 248 LLHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHAT-----PA 302
LLH+ + + N SQL A+ L LIQGPPGTGKT I+GL+S +LH+T P
Sbjct: 300 LLHQQFETSFNHSQLGALTSALEGNNITLIQGPPGTGKTHLIIGLISVLLHSTIVPKNPP 359
Query: 303 RVHSKGGLREIKRGPELPMHEKYNHWGRASPWLVGA--NPRDNIMPIDGDDGFFPTTGNE 360
+ +RE EL EK + W + PW + RDN ID D F +
Sbjct: 360 QERIDFSIRE-----ELTTEEKKDDWNISQPWFNKGFFHIRDNFELIDYD---FEERDQK 411
Query: 361 LKPEVVNSSR--------RYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
K ++ R + + R+L+CAPSN A+DEIV RLL G+ + + Y P +VR
Sbjct: 412 RKRDLWRKLRDTGSVKGLQKKRRILLCAPSNGAVDEIVSRLLRDGLLNAEGKKYNPNLVR 471
Query: 413 IGLKAHHSVNSVAIDHLV---EQKRDDSAADKQKHGATRK----------DRDSIRSAIL 459
+G +H V V++D +V +Q + ++A +T + D SIR+ IL
Sbjct: 472 VGPGSHVDVEQVSLDFMVRCRQQLMNSNSAIPSSSASTAQATSGSSRSNQDSSSIRTMIL 531
Query: 460 NEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQ 519
+EA IV +TLSFSGS+LL+K+ GFD+VIIDEAAQAVE +TL+P+ CK+V LVGDP Q
Sbjct: 532 DEADIVATTLSFSGSSLLTKMIGGFDIVIIDEAAQAVETSTLIPIQHQCKKVVLVGDPKQ 591
Query: 520 LPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGS 579
LPAT+ISP+A Y SLF+RLQ P ML TQYRMH +R FPS+ FYD+ L+DG
Sbjct: 592 LPATIISPLAIQHSYDQSLFQRLQEKNKP-HMLDTQYRMHSIIRKFPSKHFYDDLLQDGP 650
Query: 580 DVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQ 639
++ +H GP F+D+ E++P G GS N++E+ L+ +I YP+
Sbjct: 651 NIPSRAAH-YHSNPFLGPLVFYDLSWSVETKPGG-GSVCNMEEIKMAYFLYQHIIKEYPE 708
Query: 640 LKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRAS 699
S ++ IISPYR QV Q +E FK GV I TVDG QGRE+++ IFSCVRA
Sbjct: 709 EDFSGRIGIISPYRQQVLQLREAFKNYPGVS------IDTVDGFQGREREIIIFSCVRAP 762
Query: 700 DKK--SIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRVSK 757
+K IGFL+D RRMNV +TR + S++++G L +K WN+L+ A+ CL V +
Sbjct: 763 AEKGSGIGFLSDVRRMNVALTRPRCSLIIMGNVKALSVNKDWNDLIVHAQDLGCLVPVKQ 822
>gi|412993566|emb|CCO14077.1| predicted protein [Bathycoccus prasinos]
Length = 1063
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 303/918 (33%), Positives = 435/918 (47%), Gaps = 189/918 (20%)
Query: 17 FCKIILGWDYFRLVKES----QERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLL 72
F IL WDY+++ ES Q+ N L+ + + + +Y+ F L
Sbjct: 21 FLTQILAWDYYKIYAESMSAYQQSNTAKKTVTKTPSSSLKPIPLRFSNAKEYIQCFSSFL 80
Query: 73 FEEVKAQIIQ------------------------------------------------KK 84
EE KA +++ KK
Sbjct: 81 LEEAKAIVLKGDGNGSATVVCEKCAVRVNALSSKNAATTTTTAAAATTTKSSTTIEKNKK 140
Query: 85 DEEEVQEWKLRLVMECGEADGFHLPSVTYEADE-VESISPNDLLLLSK-------EEFKE 136
DEE+ +E L++ + A ++E + E + NDLL LSK E+ ++
Sbjct: 141 DEEQ-KEKTLKMCLYTAVA--------SFETQQQCEQFNENDLLFLSKLNSVSEDEKIEK 191
Query: 137 GSTFPTTYAFALVEHCQANL----LRLRMYLAGEV------------IHINKDAVK--SQ 178
G Y FA CQ + +++R++ + + KDA+ ++
Sbjct: 192 G----VDYCFAF---CQGRVSDTEVKVRLFSPPMIQKKKSGQQQQRQTNSTKDALDEDNE 244
Query: 179 RLLNIHSLITSSVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGS 238
RL NI + + S+ ++C++ST RE+LA++ V S+PF DLIL AS S +
Sbjct: 245 RLANIRAKLLSN----NHSWHLTRVCNMSTARREWLAVQEVSSIPFADLILDASNNSDNT 300
Query: 239 ----------------------QDQSWKIPGLLHEYIKEN--HNASQLEAIHEGLLRK-- 272
SW+IP L + +K + SQL+ L K
Sbjct: 301 TVSNANVTKKQKKEQQHKQQRQYQPSWEIPKDLSDAMKAKGRSDQSQLKIATTTALTKEN 360
Query: 273 AFVLIQGPPGTGKTQTILGLLSAILHATPAR---VHSKGGLREIKRGPELPMHEKYNHWG 329
VLIQGPPGTGKT TI+ LLS IL A P V ++G K+ + EK
Sbjct: 361 PLVLIQGPPGTGKTTTIISLLSVILAAQPINRNHVANRGDDWNNKKKSTITEEEKLAMRM 420
Query: 330 RASPWLVG-ANPRDNIMPID-GD------DGFFPTTGNELKPEVVNSSRRY--------- 372
+A PWL G NPRD + ID GD + GN+ + N R +
Sbjct: 421 KAQPWLFGITNPRDCLPNIDLGDTSDDDEENNGTNDGNKNSANIENQRRGHTAPSSTIPI 480
Query: 373 ---------RVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNS 423
R ++LVCAPSNSA+DEIV R+L + DE+ +SY P IVR+G V +
Sbjct: 481 ELMGPSISRRSKILVCAPSNSAVDEIVRRILRKELLDEHGKSYKPSIVRVGGNFRKDVAN 540
Query: 424 VAIDHLVEQKRDDSAADKQKHGATRKDRDSI------------RSAILNEAVIVCSTLSF 471
V+++ L+E++ + G KD + R IL+EA IVC+TLS
Sbjct: 541 VSLERLIEERIKQDYGKEYFSGGGGKDEKGLKKFGSFQDNRRFRRIILDEAKIVCTTLSA 600
Query: 472 SGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLA-TGCKQVFLVGDPVQLPATVISPVAE 530
+GS + ++ FDV+I+DEAAQAVEP+ L+PL KQV+LVGDP QLPATV+S
Sbjct: 601 AGSEIFRRMKTKFDVIIVDEAAQAVEPSILIPLTEIKAKQVYLVGDPAQLPATVLSRECA 660
Query: 531 HLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWH 590
Y SLFKRL + YPV L TQYRM PE+R FPS +FY L DG + R+WH
Sbjct: 661 KNNYEQSLFKRLMDSAYPVHKLSTQYRMLPEIREFPSDQFYGGELRDGPGLLTQNYREWH 720
Query: 591 EYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLK-SSSQLAII 649
E + + PF F+D+ GKE + SW+N +E F + L H+L+ P LK ++AII
Sbjct: 721 ECKLYKPFVFYDVQHGKEESSSSGFSWVNEEEATFAVELAHQLLKANPVLKREGPKIAII 780
Query: 650 SPYRHQVKQFQERFKETFGVESQ--KVVDITTVDGCQGREKDVAIFSCVRA--------- 698
SPYR QV + + + FG ++V++ ++D QG EKDV IFS VRA
Sbjct: 781 SPYRAQVSMIRRKLERKFGGMHNYGRIVEVLSIDNSQGSEKDVVIFSLVRAPLNDMFQIS 840
Query: 699 ---------SDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQ 749
S + +GF+AD RR+NVG+TRAK S+ V+G A + D +W LV+SA K+
Sbjct: 841 KKASNANTKSRRNVLGFVADERRINVGLTRAKCSMFVLGNAKAMMTDPNWGALVESARKR 900
Query: 750 DCLFR--VSKPYASFFSD 765
C + SFFS+
Sbjct: 901 GCTIEAPTRANFRSFFSN 918
>gi|66821529|ref|XP_644230.1| DNA2/NAM7 helicase family protein [Dictyostelium discoideum AX4]
gi|75013564|sp|Q86AS0.1|Y4399_DICDI RecName: Full=Probable helicase DDB_G0274399
gi|60472139|gb|EAL70092.1| DNA2/NAM7 helicase family protein [Dictyostelium discoideum AX4]
Length = 967
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 251/644 (38%), Positives = 351/644 (54%), Gaps = 56/644 (8%)
Query: 142 TTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSAVEKRLFSL 201
T + VEH ++++ Y+ G +K R + L+ + ++
Sbjct: 236 TLHLIGTVEHLDNGGIKVKFYVKG---------IKGDRARQVSLLLRYEID-----WWTT 281
Query: 202 KICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIKENHNASQ 261
K+C+LST+ RE+ AL F ++ + G KIP LLH+ +N SQ
Sbjct: 282 KLCNLSTLQREFAALYQCSQSNFMKTLMMRDD--DGEDGIVMKIPPLLHDQFSSTYNDSQ 339
Query: 262 LEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLR---EIKRGPE 318
L A+ L A LIQGPPGTGKT ILGL+S +LH+T GG + + E
Sbjct: 340 LNALTSALEGNAITLIQGPPGTGKTHVILGLISVLLHSTIVPKVKSGGNNLGDHLLKDRE 399
Query: 319 LPMHEKYNHWGRASPWLVGANP--RDNIMPIDGDDGFFPTTGNELKPEVVNSSR------ 370
L M EK + W + PW P RDN ID D F + K ++ R
Sbjct: 400 LSMAEKRDLWNISQPWFNKEFPHIRDNYELIDYD---FEERDQKRKRDLWRKLRDTGSVK 456
Query: 371 --RYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDH 428
+ R+L+CAPSN A+DEIV RL+ G+ + + R Y P +VR+G +H V SV++D+
Sbjct: 457 GGSTKRRILLCAPSNGAVDEIVSRLIRDGLLNADGRKYNPNLVRVGPGSHSDVESVSLDY 516
Query: 429 LVEQKRD-------------DSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSA 475
+V ++ +AA + +D SIR+ +L+EA IV +TLSFSG++
Sbjct: 517 MVRCRQQLMNSNSAIPSSSASTAAATSGSSRSTQDTSSIRTLVLDEADIVATTLSFSGAS 576
Query: 476 LLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYG 535
LL+K+ GFD+VIIDEAAQAVE +TL+P+ GCK+V LVGDP QLPAT+ISP+A Y
Sbjct: 577 LLTKMAGGFDIVIIDEAAQAVETSTLIPIQHGCKKVVLVGDPKQLPATIISPLAIKYKYD 636
Query: 536 TSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCF 595
SLF+RLQ P ML TQYRMH +R+FPSR FY + L DG ++ T +H F
Sbjct: 637 QSLFQRLQEKNSP-HMLTTQYRMHSLIRAFPSRHFYQDLLLDGPNIPSRATH-YHSNPFF 694
Query: 596 GPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQ 655
GP F+D+ E++P G GS N E + LF +YP +S++ IISPYR Q
Sbjct: 695 GPLVFYDLSWSTETKPGG-GSVFNEHECKMAMYLFQLFTKVYPDEDFASRIGIISPYRQQ 753
Query: 656 VKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRA--SDKKSIGFLADYRRM 713
V +E FK G+ I TVDG QGRE+++ IFSCVRA + IGFL+D RRM
Sbjct: 754 VLALREIFKNYPGIS------IDTVDGFQGREREIIIFSCVRAPVEEGAGIGFLSDVRRM 807
Query: 714 NVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRVSK 757
NV +TR +SS+L++G L +K WN L++ + L V+K
Sbjct: 808 NVALTRPRSSLLILGNTKALSINKDWNELIQHTQNNQQLIPVTK 851
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 60/121 (49%), Gaps = 19/121 (15%)
Query: 14 IFRFCKIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLF 73
I RF K IL WD L + +E L+ VK ++ + +DY+ T+EPLLF
Sbjct: 41 IDRFYKHILTWDASDLSPKEKE---------------LKPVKVSFNNEEDYITTYEPLLF 85
Query: 74 EEVKAQI---IQKKDEEEVQEWKLRLVMECGEADGFHLPS-VTYEADEVESISPNDLLLL 129
EE +AQ+ I++ ++++ E L V E + F + V E + NDL+++
Sbjct: 86 EECRAQLERSIEEGEKDDTSEPTLSRVRYISEVNDFLVVGLVMAENVNIFQFHDNDLIMI 145
Query: 130 S 130
S
Sbjct: 146 S 146
>gi|224140841|ref|XP_002323787.1| predicted protein [Populus trichocarpa]
gi|222866789|gb|EEF03920.1| predicted protein [Populus trichocarpa]
Length = 308
Score = 414 bits (1063), Expect = e-112, Method: Compositional matrix adjust.
Identities = 212/310 (68%), Positives = 251/310 (80%), Gaps = 7/310 (2%)
Query: 1 MAVDKDK--PQDEASIFRFCKIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTY 58
MAVDKD+ ++EAS RFCKIILGWDYF L+ E+ ++ + K G GLR+VK+TY
Sbjct: 1 MAVDKDRLREEEEASFVRFCKIILGWDYFGLLTEAAKQKKERGKG---GGSGLRQVKNTY 57
Query: 59 KDVDDYLATFEPLLFEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADEV 118
KDVDDYLATFEPLLFEEVKAQIIQKKD+EEV EW LRLV+EC E++GF LPSVTY DE
Sbjct: 58 KDVDDYLATFEPLLFEEVKAQIIQKKDDEEVTEWVLRLVVECNESEGFLLPSVTYGDDEG 117
Query: 119 ESISPNDLLLLSKEEFKEGS-TFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKS 177
E I NDLLLLS+++FKEG FP YAFALVE Q NLLRLRM+LAGEV+++N D ++S
Sbjct: 118 EKIVQNDLLLLSEDQFKEGGGKFPQVYAFALVEQRQHNLLRLRMFLAGEVMNLNTDVIES 177
Query: 178 Q-RLLNIHSLITSSVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSS 236
+ RLL +H LITS EKRLFS+KICSLSTI+REY ALRS+GSLPFKDLIL+A++KSS
Sbjct: 178 RTRLLKMHGLITSPGLLHEKRLFSVKICSLSTISREYFALRSIGSLPFKDLILTAADKSS 237
Query: 237 GSQDQSWKIPGLLHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAI 296
GS+DQ+WK+ L E+ + + N SQ+EAI GLLRKAFVLIQGPPGTGKTQTIL LLSAI
Sbjct: 238 GSEDQAWKVSQPLSEHFQGSLNKSQMEAIDAGLLRKAFVLIQGPPGTGKTQTILALLSAI 297
Query: 297 LHATPARVHS 306
LHATP RVH+
Sbjct: 298 LHATPTRVHT 307
>gi|222628875|gb|EEE61007.1| hypothetical protein OsJ_14822 [Oryza sativa Japonica Group]
Length = 344
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 202/341 (59%), Positives = 254/341 (74%), Gaps = 9/341 (2%)
Query: 480 LNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLF 539
+ FDVVIIDEAAQAVEPATL+PL GCKQVFLVGDPVQLPATVIS A+ LGYGTSLF
Sbjct: 1 MARAFDVVIIDEAAQAVEPATLIPLIHGCKQVFLVGDPVQLPATVISSTAQKLGYGTSLF 60
Query: 540 KRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFS 599
KR Q AG+PV+MLK QYRMHPE+ FPS+EFY+ LEDG + R WH Y CFGPF
Sbjct: 61 KRFQAAGFPVQMLKIQYRMHPEISIFPSKEFYEGVLEDGEGLS--KKRPWHSYSCFGPFC 118
Query: 600 FFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQF 659
FFD+ +G ESQP+GSGSW+N DEV+F+ LL+H++ YP+LKSSSQ+A+ISPYRHQVK
Sbjct: 119 FFDV-DGTESQPSGSGSWVNEDEVEFITLLYHQMAMRYPELKSSSQVAVISPYRHQVKLL 177
Query: 660 QERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITR 719
++ F+ TFG +S++V+D+ TVDG QG EK+V IFSCVR + ++ IGF++D+RRMNV ITR
Sbjct: 178 KDHFRSTFGDQSKEVIDVNTVDGFQGCEKEVVIFSCVRCNKEQKIGFVSDFRRMNVAITR 237
Query: 720 AKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRVSKPYASFFSDENLESM---RKNAT 776
A+S++LVVG ASTL+EDKHWNNLV+SA+++ F+V KP+ +FF D+ L++M R
Sbjct: 238 ARSAVLVVGSASTLKEDKHWNNLVESAKERGRYFQVPKPFTAFFVDDKLKTMKVERAPPE 297
Query: 777 TDNVQG--ADGHVPHDDETMHYANTGDA-DQGQADDIDNAD 814
VQ A E M + GD D+G DD AD
Sbjct: 298 LRTVQALEAINEAVVGQELMDVDDAGDQEDEGYDDDPVEAD 338
>gi|281208036|gb|EFA82214.1| DNA2/NAM7 helicase family protein [Polysphondylium pallidum PN500]
Length = 864
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 237/577 (41%), Positives = 330/577 (57%), Gaps = 41/577 (7%)
Query: 206 LSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIKENHNASQLEAI 265
+ I REYLAL + F +L A ++ G KIP L E + ++N SQ A+
Sbjct: 224 MGGIKREYLALYTTAKTSFMKTLLLADDEEPGV---PMKIPPALKEKFESSYNPSQFGAL 280
Query: 266 HEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVH---SKGGLREIKRGPELPMH 322
L LIQGPPGTGKT I+GLLS +LH+T H K L + R EL
Sbjct: 281 TSALSGSNITLIQGPPGTGKTHVIVGLLSVLLHSTEVPKHVIEEKESL--VHR--ELYEF 336
Query: 323 EKYNHWGRASPWLVGA--NPRDNIMPID-----GDDGFFPTTGNELKPEVVNSSRRYRVR 375
EK W + PWL N RD+ ID ++ +L+ + + R
Sbjct: 337 EKLESWEISQPWLKNGFKNIRDDYTLIDYSFEEKEERRKRDLWRKLRETGTTKNIARKKR 396
Query: 376 VLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLV---EQ 432
+L+CAPSN A+DEIV RL+ G+ + +SY P +VR+G +H V V ++++V +Q
Sbjct: 397 ILLCAPSNGAVDEIVTRLIRDGLLNHEGKSYRPNLVRVGPGSHQDVEPVTLEYMVRCRQQ 456
Query: 433 KRDDSAADKQKHGAT---------RKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHG 483
+ ++A +T D +SIR+ +L +A I+ +TLSFSGS++L K+N G
Sbjct: 457 LMNSNSAIPSSSASTAVATTSPKSSLDTNSIRTLVLEDAEIIATTLSFSGSSILMKMN-G 515
Query: 484 FDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQ 543
FD+VIIDEAAQAVE +TLVP+ CK++ LVGDP QLPAT+ISP+A Y SLF+RLQ
Sbjct: 516 FDIVIIDEAAQAVETSTLVPMQHKCKKIVLVGDPKQLPATIISPIAIKQKYDQSLFQRLQ 575
Query: 544 RAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDI 603
P ML TQYRMH +R+FPS+ FY++ LEDG ++ T ++H FGP F+D+
Sbjct: 576 EKRTP-HMLTTQYRMHSSIRAFPSKHFYNDLLEDGPNIPSRAT-NYHANPFFGPLIFYDL 633
Query: 604 HEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERF 663
E++P G GS N DE L L+ L+ YP S ++ IISPYR QV +E F
Sbjct: 634 SFSVETKPGG-GSVFNEDECRMALQLYQLLLKTYPDELFSGRIGIISPYRQQVLSLREYF 692
Query: 664 KETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKK--SIGFLADYRRMNVGITRAK 721
K G + I TVDG QGRE+++ IFSCVRA +K IGFLAD RRMNV +TR +
Sbjct: 693 KNYSG------ISIDTVDGFQGREREIIIFSCVRAPAEKGAGIGFLADVRRMNVALTRPR 746
Query: 722 SSILVVGCASTLREDKHWNNLVKSAEKQDCLFRVSKP 758
SS+L++G + +L + W L+K A+ + L ++ P
Sbjct: 747 SSLLIIGNSKSLCINPDWYELIKHAQDNNNLIPITNP 783
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 68/139 (48%), Gaps = 26/139 (18%)
Query: 1 MAVDK-DKPQDEASIFRFCKIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYK 59
++VD DK ++ I +F + IL WD L + ++K+ L+ VK +
Sbjct: 19 LSVDPLDKMSNDQIIAQFYRKILAWDVSNL---------RANEKL------LKPVKVEFL 63
Query: 60 DVDDYLATFEPLLFEEVKAQII-------QKKD-EEEVQEWKLRLVMECGEADGFHLPSV 111
D DY+ TFEPLL EE +AQ+ +K D E E ++R + E +D + V
Sbjct: 64 DRHDYIDTFEPLLLEECRAQLERSIEEGGEKNDVENEPVFSRVRYISE--NSDFLDVGLV 121
Query: 112 TYEADEVESISPNDLLLLS 130
+ +E+ NDL+++S
Sbjct: 122 MTKENEMYQFHENDLMMIS 140
>gi|159476392|ref|XP_001696295.1| predicted protein [Chlamydomonas reinhardtii]
gi|158282520|gb|EDP08272.1| predicted protein [Chlamydomonas reinhardtii]
Length = 794
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 265/780 (33%), Positives = 386/780 (49%), Gaps = 132/780 (16%)
Query: 19 KIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKA 78
KI+L WDYF L + E + LR V T+ ++ +Y++ EPLL EE A
Sbjct: 62 KILLAWDYFDLWGKVDEGGGVYEE--------LRPVPQTFANIKEYVSVMEPLLLEECCA 113
Query: 79 QIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADEVESISPNDLLLLSKEEFKEGS 138
QI++ +E EV +V + F + + ++ + + NDL+L+ KE + +
Sbjct: 114 QIMRGVEEGEVMTPHPTVVANSEHREDFLVTRLVMQSGVTDLYTDNDLVLICKENPEAEN 173
Query: 139 TFPTTYAFALVE-HCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSAVEKR 197
+ +A E H +LR++ +L+ + N ++ + + SS
Sbjct: 174 VNTSLHALGFCEAHEGQQVLRIKFFLSPDSQAGNVKGMQRAKAMTTGLCTPSSC------ 227
Query: 198 LFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIKENH 257
+ L++ ++STI RE++AL+ +PF D+++SA +++ + + IP + ++
Sbjct: 228 WWLLRLGNISTITREWVALQHAHLVPFMDILISAKSRAAPA-SKHLDIPPGMKAAMEREC 286
Query: 258 NASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHAT--PARVHSKGGL----- 310
N SQ+ A+ GL VLIQGPPGTGKT+TIL LLS I+H+ +R HS +
Sbjct: 287 NPSQMSALQAGLDGTPVVLIQGPPGTGKTRTILNLLSVIMHSANNASRQHSAPNICPTHV 346
Query: 311 -------REIKRGPELPM--HEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNEL 361
+ LP+ E+ PWL G ++P G DG TGN
Sbjct: 347 CTTSPAGSNARVAAMLPLDPSERSELVAAQCPWLAG-----RLLP--GPDGAA-DTGNV- 397
Query: 362 KPEVVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSV 421
R RV P + D+ LL + R+ PK AH V
Sbjct: 398 ---------RDRVTPYDPLPPGAVHDD-CFGLLRRVVAQRVGRAMGPK-------AHVLV 440
Query: 422 NSVAIDHL-----------VEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLS 470
S D + + R S A K GA ++RD +R AIL+EA IVCSTLS
Sbjct: 441 CSHGSDPVPTALTSPFPPPPDPLRVHSVAAGGKTGA--QERDRMRVAILDEANIVCSTLS 498
Query: 471 FSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAE 530
F+GS++ +L+ FDVV+IDEAAQAVEP+TLVPL GCKQV+LVGDPVQLPATVI+ A
Sbjct: 499 FAGSSVFYRLSRKFDVVVIDEAAQAVEPSTLVPLTMGCKQVYLVGDPVQLPATVIATRAV 558
Query: 531 HLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWH 590
GY SLFKRLQ V T + WH
Sbjct: 559 EQGYDCSLFKRLQ------------------------------------GVLQETVQPWH 582
Query: 591 EYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIIS 650
FGPF+F+D+ G+ES P G S +N L+ ++ +A+IS
Sbjct: 583 SQPAFGPFAFYDV-AGRESTPPGGASIMN-----------------KAGLRRTASVAVIS 624
Query: 651 PYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRA-------SDKKS 703
PY+ QVK ++ FK G E+ ++VDI T+DG QGREKD+ IFS VR+ + +
Sbjct: 625 PYKAQVKLLRDSFKTALGEEAARLVDINTIDGFQGREKDICIFSAVRSPPAPKKGARRAG 684
Query: 704 IGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRVSKPYASFF 763
IGF+AD RR+NVG+TRA+ S++V+G L+ D HW NL+ SA + CL+R PYA +
Sbjct: 685 IGFVADERRINVGLTRARCSLIVIGNVRALQVDPHWANLIHSAISRRCLYRPKPPYAEWM 744
>gi|294909689|ref|XP_002777827.1| splicing endonuclease positive effector sen1, putative [Perkinsus
marinus ATCC 50983]
gi|239885789|gb|EER09622.1| splicing endonuclease positive effector sen1, putative [Perkinsus
marinus ATCC 50983]
Length = 959
Score = 370 bits (950), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 265/823 (32%), Positives = 402/823 (48%), Gaps = 116/823 (14%)
Query: 21 ILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKAQI 80
IL WD+F+ V + + + + + +LG V +++ ++Y F PL E K+Q+
Sbjct: 27 ILSWDFFKDVNDDRTQEELKKLHENEDELGFDHVPLRFENFEEYNDVFYPLFLRETKSQL 86
Query: 81 -----IQKKDEEEVQEWKLRLVMECGEADGF-HLPSVTYEADEVESISPNDLLLLSK-EE 133
+++ + E+ R++ E GF L + E +DL+L+S E+
Sbjct: 87 DRARHMERGETEKFSHLTFRII---NERIGFVRLELIRMSMASREQYGGSDLVLMSSLED 143
Query: 134 FKEGSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSA 193
E + +A A VE L LR+ L + H + + +L SA
Sbjct: 144 PLEDNP---VHALAYVESFVDGRLSLRLRLDLQTGHTS-----DRHMLEFRERSKRIASA 195
Query: 194 VEKR--LFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQS--------- 242
+ + + KI S+STI REY A++++ P +L+ E G D S
Sbjct: 196 IAENADWYITKITSMSTIHREYQAMQALRRSPLLKWVLNDIEVEEGQCDVSPKAEQPSAK 255
Query: 243 ------------------WKIPGLLHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTG 284
K+P L I+ +N SQ AI E + LIQGPPGTG
Sbjct: 256 KRRKAAEVAKPATRKQRRLKMPPGLKTTIEGKYNDSQRHAIMEATKSEGLTLIQGPPGTG 315
Query: 285 KTQTILGLLSAILH-----------------ATPARVHSKGG------------------ 309
KT TI+G+LSAIL+ A P + GG
Sbjct: 316 KTTTIVGILSAILNSDDAEEAEETDPSEASTALPREIIDDGGELSSSDIEDDAEFEKQLA 375
Query: 310 ------LREIKRGPELPMHEKYNHWGRASPWLV----GANPRDNIMPIDGDDGFFPTTGN 359
L EI++ ++ + W +P + NP+D P D F +
Sbjct: 376 KRRKRNLEEIRKVEMKWAYKGFKSWQETAPKRLYPPQPNNPKD-AYPEDPVMRLFKENTS 434
Query: 360 ELKPEVVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHH 419
KP + +VLVCAPSN+A+DEIV R+ +TGI + YTP +VR+G H
Sbjct: 435 NAKP---------KRKVLVCAPSNAAIDEIVRRVTSTGIYGRDGTLYTPYVVRLGPNLHP 485
Query: 420 SVNSVAIDHLVEQKRDDSAADKQKHGATRKDRDSIRS--AILNEAVIVCSTLSFSGSALL 477
S+ +++ ++ +R ++ GA D+ R +ILNEAVIVC+TLS SG L
Sbjct: 486 SLQQYSLESIMATRRKATSG-----GAATNKEDTYRHRVSILNEAVIVCATLSVSGGRDL 540
Query: 478 SKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTS 537
FD V++DEA+Q VE TL+PL GC+++ LVGDP QLPATV S AE GYG S
Sbjct: 541 LSYPGSFDTVVVDEASQGVEMGTLIPLQMGCQRMVLVGDPKQLPATVFSATAERFGYGKS 600
Query: 538 LFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDV-EDYTTRDWHEYRCFG 596
LF+RLQ++ + V +L TQ+RMHP + FPS EFYD +++ ++ E + W FG
Sbjct: 601 LFQRLQQSDFQVNLLSTQFRMHPAIAEFPSNEFYDGGVKNAENIMELVGDQPWSHIPIFG 660
Query: 597 PFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQV 656
P SFF++ G+E + S N E +F++ +F L +P+ +LA+ISPY QV
Sbjct: 661 PVSFFNV-PGQEEK--SYTSLTNEAEANFIIHIFKMLQVCWPKEPWREKLAVISPYAEQV 717
Query: 657 KQFQERFKETFGVESQKV--VDITTVDGCQGREKDVAIFSCVRA-SDKKSIGFLADYRRM 713
+ +++F++ + + KV V++ TVDG QGREKD + S VRA D S+GF+ D RRM
Sbjct: 718 RLIRQKFRQLYNMVESKVCPVEVNTVDGFQGREKDCVVVSTVRADPDATSVGFVRDVRRM 777
Query: 714 NVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRVS 756
NV +TR ++++ V G L + HW + + +K LF V+
Sbjct: 778 NVSLTRGRTNLWVCGHQRMLSNNPHWKSFIVKQQKAKRLFNVT 820
>gi|449526031|ref|XP_004170018.1| PREDICTED: probable helicase MAGATAMA 3-like, partial [Cucumis
sativus]
Length = 265
Score = 359 bits (921), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 174/266 (65%), Positives = 210/266 (78%), Gaps = 11/266 (4%)
Query: 562 VRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINID 621
+RSFPSREFY E+LED DV+ TTR WH YRC+GPF FFD+HEGKESQP GSGSW+NID
Sbjct: 1 IRSFPSREFYAESLEDAQDVKLRTTRAWHAYRCYGPFCFFDLHEGKESQPPGSGSWVNID 60
Query: 622 EVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVD 681
E DFVL L+HKL+ YP+LKS+SQ+AIISPY QVK QE+F + FG++ +VDIT+VD
Sbjct: 61 EADFVLHLYHKLVISYPELKSNSQVAIISPYSQQVKLLQEKFVDLFGMDPSGIVDITSVD 120
Query: 682 GCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNN 741
GCQGREKD+AIFSCVRAS+ +SIGFL+D RRMNVGITRA++SILVVG ASTL+ D+HWNN
Sbjct: 121 GCQGREKDIAIFSCVRASENRSIGFLSDCRRMNVGITRARASILVVGSASTLKRDEHWNN 180
Query: 742 LVKSAEKQDCLFRVSKPYASFFSDENLESMR-KNATTDNVQGADGHVPHDDETMHYA--- 797
LV+SA+K+DCLF+VSKPY +F +DE++ESMR KN + G + DET A
Sbjct: 181 LVESAQKRDCLFKVSKPYTTFLNDESVESMRVKN------EPPVGPMGEKDETEANAQQE 234
Query: 798 -NTGDADQGQADDIDNADGDAEMYDA 822
N GDADQ QADD D DGD EMY+
Sbjct: 235 PNAGDADQAQADDNDFGDGDEEMYEG 260
>gi|224028895|gb|ACN33523.1| unknown [Zea mays]
Length = 392
Score = 352 bits (904), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 194/353 (54%), Positives = 244/353 (69%), Gaps = 22/353 (6%)
Query: 16 RFCKIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEE 75
RF KI+L WDY RL+ ES + K +K L+ VK+TY V +YL FEPLLFEE
Sbjct: 21 RFQKIVLSWDYLRLIAES--KGGKQAKV-------LQHVKNTYVSVAEYLGVFEPLLFEE 71
Query: 76 VKAQIIQKK---DEEEVQEWKLRLVMECGEADGFHLPSVTYEADEVESISPNDLLLLSKE 132
VKAQIIQ + +EE +W+ V C E++GFH SV E + +++S NDLLL+SKE
Sbjct: 72 VKAQIIQGRSNDEEESGMDWRRGAVGSCTESEGFHKLSVAVEDNFQDNVSENDLLLISKE 131
Query: 133 EFKEGSTFPTTYAFALVEHCQANL-LRLRMYLAGEVIHIN-KDAVKSQRLLNIHSLITSS 190
+F+EGST P YAFALVE + + LR ++AGE+ ++N VKS RL + S+I S
Sbjct: 132 KFEEGST-PNAYAFALVEQRGGGIHISLRTFVAGEIQNLNVAKPVKSTRLQHFASIIASQ 190
Query: 191 VSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQS--WKIPGL 248
S L+ LK+CSLSTI RE+ A+ SV SLPFKDLILSA+E DQS W +P
Sbjct: 191 NSL----LWILKVCSLSTIMREFTAMHSVASLPFKDLILSATEAHKDGDDQSRAWNVPEP 246
Query: 249 LHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKG 308
L +Y+K N N SQLEA++ GL R++FVLIQGPPGTGKTQTILGLLSA+LH+ PAR+ KG
Sbjct: 247 LMDYLKVNLNDSQLEAVNAGLSRRSFVLIQGPPGTGKTQTILGLLSAVLHSAPARMQIKG 306
Query: 309 GLREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNEL 361
G +K GPEL + K HW +ASPWL+GANPRD IMP+DGDDGF+P TGNEL
Sbjct: 307 GFDVLKHGPELDIDGKRAHWIKASPWLLGANPRDLIMPVDGDDGFYP-TGNEL 358
>gi|118366801|ref|XP_001016616.1| conserved hypothetical protein [Tetrahymena thermophila]
gi|89298383|gb|EAR96371.1| conserved hypothetical protein [Tetrahymena thermophila SB210]
Length = 834
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 242/796 (30%), Positives = 389/796 (48%), Gaps = 105/796 (13%)
Query: 34 QERNDKNSKKVDRGKL---------GLREVKDTYKDVDDYLATFEPLLFEEVKAQIIQKK 84
+E DKN+ +V++ L + ++ D +DY+ TFE LF E KAQII+ +
Sbjct: 62 EETADKNADQVEQQNTLQQPQMSFTNLANIPLSFNDPEDYVKTFEQHLFSEAKAQIIKAQ 121
Query: 85 DEE----------------EVQEWKLRLVMECGEADGFHLPSVTYE--ADEVESISPNDL 126
E E+ K V+ +T E AD +D
Sbjct: 122 VTEICFKINIKCLKKSRAPEIMRLKNSQVIALKNNSELFFRKLTMEKVADSETKYGTHDF 181
Query: 127 LLLSKEEFKEGSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSL 186
+++S ++ + +VE + N + +++ V N ++Q++L +
Sbjct: 182 IVISLQD--PSKVISGEHMLGVVERAEGNEILVKV-----VFDENSSDPRNQKILKV--- 231
Query: 187 ITSSVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIP 246
+V + + K CS+ TI REY AL + L K+ IL+ EK + +++ + IP
Sbjct: 232 -MQQDESVWRNWYVKKFCSIVTIQREYEALHNFNDLLLKEFILNP-EKLTQKKEEKFSIP 289
Query: 247 GLLHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHS 306
L + + +N SQ++AI+ L ++ LIQGPPGTGKT+T+LG +S ++++
Sbjct: 290 EQLSIRLNQIYNPSQIQAINSTLKKQGVTLIQGPPGTGKTRTVLGTVSVLINSFNEDQLK 349
Query: 307 KGGLREIKRGPELPMHEKYNHWGRASPWL----------------------------VGA 338
+ EI+ +L H+ A PW+ + A
Sbjct: 350 QKHSMEIEDKSKLVEQSGEFHFELAMPWMQPNYVDWRDSTFDHLHNDFSNFTKTKKYITA 409
Query: 339 NPRDNIMPIDGDDGFFPTTGNELKPEVVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGI 398
+ D ++PI PE ++L+C PSN+A+DEIV ++ G+
Sbjct: 410 DQTDKVIPI------LKAQEEHAPPE----------KILICGPSNAAIDEIVRKMKKEGL 453
Query: 399 RDENIRSYTPK--IVRIGLKAHHSVNSVAIDHLVEQKRDDSAADKQKHGATRKDRDSIRS 456
D+N Y P IVRIG + V++D+LV+QK + +D IR
Sbjct: 454 LDKNGNIYDPSKIIVRIGENYDKDLEDVSLDYLVKQKLGE-------QNIRSEDAQEIRK 506
Query: 457 AILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGD 516
IL EA I+C TLS +GS +L+ N FD V+IDEAAQ+ E +TL+PL C ++ L+GD
Sbjct: 507 KILKEAKIICGTLSSTGSQILASANFKFDTVVIDEAAQSTEISTLIPLQYQCTRLILIGD 566
Query: 517 PVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALE 576
QLPAT+ S E Y SLF+R ++ V ML QYRM+P + F S+ FY + +
Sbjct: 567 HNQLPATIFSKKCEKFNYHQSLFERFEKCKVEVHMLNQQYRMNPIISKFISQTFYQDKIS 626
Query: 577 DGSDVEDYTTR-DWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLIS 635
D + + + + ++ R F P FF++ EG E S+ N +E ++ +++KL +
Sbjct: 627 DAEKINELVGQPEIYQLRLFQPVVFFNV-EGNEI--FEKSSYKNEEESKAIVEIYNKLRT 683
Query: 636 MYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSC 695
+P ++L II+ Y QVK+ +++ K + +V++ TVDG QGREKD+ IFS
Sbjct: 684 TFPNF-DLNKLGIITAYSRQVKEIEKKIK-AHDKTDKCMVEVHTVDGFQGREKDIIIFST 741
Query: 696 VRASD-------KKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEK 748
VRAS KK+IGFL D RRMNV ++RA+ ++VVG L+ K W L + + +
Sbjct: 742 VRASQVNGEKNTKKTIGFLNDRRRMNVSLSRARLCVIVVGDLKQLKFSKLWKGLAEYSIE 801
Query: 749 QDCLFRVSKPYASFFS 764
Q + + PY +F S
Sbjct: 802 QRSCYNMVAPYQTFVS 817
>gi|449298811|gb|EMC94826.1| hypothetical protein BAUCODRAFT_93353, partial [Baudoinia
compniacensis UAMH 10762]
Length = 1803
Score = 342 bits (876), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 252/817 (30%), Positives = 381/817 (46%), Gaps = 174/817 (21%)
Query: 19 KIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKA 78
K+IL WD+F + N+ +R VK++Y + Y FEPLL E
Sbjct: 1066 KVILKWDFFH---DGDYPPGANTNVFER-------VKNSYSNPVSYREAFEPLLTLEAWQ 1115
Query: 79 QIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADEVE-SISPNDLLLLSKE-EFKE 136
+++ ++E + +++++ L S+ + + E ++ D++LLSK + +
Sbjct: 1116 NMVKSREENTAKPYEVKIQNRSNVDHFLELSSIVSQQENRELQLNEGDIVLLSKAGKPSD 1175
Query: 137 GSTFPTTYAFALVEHCQANLLRLRMYLAG-EVIHINKDAVKSQRLLNIHSLITSSVSAVE 195
+T P HC A + +++ A EV++ +++ SL S VS +
Sbjct: 1176 DATSP---------HCLARICKIKRQKAQMEVVY---------QVMPGTSLAPSLVS--Q 1215
Query: 196 KRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSA--------SEKSSGSQDQSWKIPG 247
+++ KI SL+ + REY A++ + I+ A SEK + W
Sbjct: 1216 AQVYGQKIQSLTPLEREYGAMQGLQYYDLCTQIIKAAPSKRMNFSEKQIAAYQDVW---- 1271
Query: 248 LLHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSK 307
N N +Q EA++ L + F LIQGPPG+GKT+TI+ ++ +L + S
Sbjct: 1272 --------NVNRAQSEAVNAALENEGFSLIQGPPGSGKTKTIIAIVGGLLSQSLGSATS- 1322
Query: 308 GGLREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVN 367
G + I PR N I G G T
Sbjct: 1323 -GAKPI------------------------TMPRMNGAHI-GAGGSDAATK--------- 1347
Query: 368 SSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIG------------- 414
++LVCAPSN+A+DE+V+RL G+ + R ++ +VRIG
Sbjct: 1348 -------KLLVCAPSNAAVDELVMRL-KEGVTTKGGRHHSVNVVRIGRSDAINSQVIDVT 1399
Query: 415 --------------------------LKAHHSVNSVAIDHLVEQKRDDSAADKQKHGATR 448
K H SV++ D + QKRD AA Q
Sbjct: 1400 MDELVTKRLGGNSANNEATRAKNADLFKEHESVSAALRD--LYQKRDSGAAQSQDSTVLE 1457
Query: 449 KDRDSIR--------------------------------SAILNEAVIVCSTLSFSGSAL 476
+ S+R A+L+EA ++C+TLS SG +
Sbjct: 1458 NEIASVRRRKNELGVRIDNVKDQERNAGREAELSRKRAQQAVLDEAHVICATLSGSGHDM 1517
Query: 477 LSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGT 536
LN F+ VIIDEAAQ VE ++L+PL GC + +VGDP QLP TV S A Y
Sbjct: 1518 FQSLNIEFETVIIDEAAQCVEMSSLIPLKYGCIKCIMVGDPKQLPPTVFSKEAAKFQYEQ 1577
Query: 537 SLFKRLQRAGYP--VKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRC 594
SLF R+Q +P V +L TQYRMHP++ FPSR FYD L+DG+ + R WH
Sbjct: 1578 SLFVRMQN-NHPEQVHLLDTQYRMHPDISVFPSRTFYDGLLKDGTGMASLRQRPWHASAV 1636
Query: 595 FGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRH 654
P+ FFD+H +S P G S +NI EV+ + L+ +LIS + + + ++ II+PY+
Sbjct: 1637 LAPYRFFDVHGQHQSAPKGH-SLVNIAEVEIAMALYERLISDFKGYEYNGRIGIITPYKS 1695
Query: 655 QVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMN 714
Q++ ++RF + FG VV+ T D QGRE ++ IFSCVRAS IGFL D RRMN
Sbjct: 1696 QLRMLRDRFSQRFGNTISDVVEFNTTDAFQGRESEIIIFSCVRASPAGGIGFLQDIRRMN 1755
Query: 715 VGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDC 751
VG+TRAKSS+ V+G + +L ++W LV+ A +D
Sbjct: 1756 VGLTRAKSSLWVLGNSDSLSRGQYWRKLVEDARARDA 1792
>gi|340504056|gb|EGR30545.1| hypothetical protein IMG5_129630 [Ichthyophthirius multifiliis]
Length = 801
Score = 341 bits (875), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 233/749 (31%), Positives = 397/749 (53%), Gaps = 67/749 (8%)
Query: 58 YKDVDDYLATFEPLLFEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADE 117
+ D +DY+ TFE LF E K+QI + + +E K+R ++ + + S+ + +
Sbjct: 82 FNDTEDYIKTFELHLFTEAKSQIQKAQIQEGSAPEKMR-ILSSTQKKHKNNESLFFRTLK 140
Query: 118 VESISPN-------DLLLLSKEEFKEGSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHI 170
+E + N D +LLS E + + +VE Q N + +++ V
Sbjct: 141 LERLEINQTQYVAHDFVLLSLTE----NEISPEHMLGVVERAQGNQINVKV-----VFDE 191
Query: 171 NKDAVKSQRLLNIHSLITSSVSAVEKRLFSLK-ICSLSTIAREYLALRSVGSLPFKDLIL 229
+++++L I + +V R + +K C++ TI REY AL++ G + K+ ++
Sbjct: 192 FGTDIRNKKLCQIFTQDDENVW----RFWQVKKFCNIVTIQREYEALQAFGKIELKEYLI 247
Query: 230 SASEKSSGSQDQSWKIPGLLHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTI 289
+ + +Q + I L ++E +N SQ+EAI L ++ LIQGPPGTGKT+T+
Sbjct: 248 TPQKLLKQVHEQ-FAISENLEIKLQETYNLSQIEAIKATLRKEGITLIQGPPGTGKTRTV 306
Query: 290 LGLLSAILHATPARVHSKGGLREIKRGPELPMHEKYNHWGRASPWL----------VGAN 339
LG +S ++++ +V K + + + +++ + W+ AN
Sbjct: 307 LGTVSVLINSFNKQVSKK-----VTQESKFVINQGEFDEKKVMAWMQPNYCDWRDQCFAN 361
Query: 340 PRDNIMPIDGDDGFFPTTGNELKPEVVNSSRRYRV---RVLVCAPSNSALDEIVLRLLNT 396
+ + GF T G + + V+ ++ +L+C PSN+A+DEIV ++ +
Sbjct: 362 IKPDFSNFTKSKGFV-TAGMQGEQISVSKTQEEHTPPQTILICGPSNAAIDEIVRKVKSE 420
Query: 397 GIRDENIRSYTPK---IVRIGLKAHHSVNSVAIDHLVEQKRDDSAADKQKHGATRKDRDS 453
G+ D+N + Y P IVRIG ++ +++++ V+QK + ++ ++
Sbjct: 421 GLLDKNGKQYFPNNNMIVRIGENFDRALEDISLEYQVKQKLGE-------MNLRAEEAEN 473
Query: 454 IRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFL 513
IR IL EA I+C TLS +GS LL N FD VIIDEAAQA E +TL+PL CK++ L
Sbjct: 474 IRKKILQEAKIICGTLSSAGSQLLINSNFYFDTVIIDEAAQAAEISTLIPLQYHCKRLIL 533
Query: 514 VGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDE 573
+GDP QLPAT+ S E Y SLF+RL + G V MLK QYRM+P + F S FY+
Sbjct: 534 IGDPNQLPATIFSKKCEKFNYDQSLFERLMKCGLNVYMLKQQYRMNPIISKFISNTFYEG 593
Query: 574 ALEDGSDVEDYTTR-DWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHK 632
++D +++ +++++R F P +++ G E S+ N +E + ++ ++ +
Sbjct: 594 KIDDAQKIKEIVGNPEFYQFRIFSPIVVLNVN-GNE--IFHKSSYKNEEESEAIVEIYAQ 650
Query: 633 LISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAI 692
L +P +QL II+PY QV + + + K+ G + + +V++ TVDG QGREKD+ I
Sbjct: 651 LKKRFPSF-DLTQLGIITPYSSQVSEIRRKIKQFDGTD-KCLVEVHTVDGFQGREKDIII 708
Query: 693 FSCVRAS-------DKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKS 745
FS VRAS +KK+IGFL D RRMNV ++RA+ S++VVG L+ K W L +
Sbjct: 709 FSTVRASIQNGVKNNKKTIGFLNDKRRMNVSLSRARLSLIVVGDLKQLKYSKLWKGLAEY 768
Query: 746 AEKQDCLFRVSKPYASFFSDENLESMRKN 774
+ + + + + +P+ + +NLE +N
Sbjct: 769 SLQLNSCYNMVQPFQRYV--DNLELHTEN 795
>gi|302811594|ref|XP_002987486.1| hypothetical protein SELMODRAFT_426269 [Selaginella moellendorffii]
gi|300144892|gb|EFJ11573.1| hypothetical protein SELMODRAFT_426269 [Selaginella moellendorffii]
Length = 2281
Score = 341 bits (874), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 258/829 (31%), Positives = 401/829 (48%), Gaps = 153/829 (18%)
Query: 51 LREVKDTYKDVDDYLATFEPLLFEEVKAQIIQKKDE---EEVQEWKLRLVMECGEADGFH 107
L +V ++++ + Y+ F PLL EE +AQ+ + +DE ++ ++ + +M D H
Sbjct: 1302 LVKVPLSFRNAEQYMEVFRPLLIEEFRAQLHRARDEFNADDTEKVGMVHLMSLERVDNLH 1361
Query: 108 LPSVTYEADEV---ESISPNDLLLLSKEEFKEGSTFPTTYAFALVEHCQANLLRLRMYLA 164
+ EA +V + + NDLLL+SK+ F E C + ++L
Sbjct: 1362 VARFKSEAGKVGASSACTENDLLLISKKPFLE---------------CPGS-----VHLL 1401
Query: 165 GEVIHINKDAVKSQRLL---NIHSLITSSVSAVEKRLFSLKICSLSTIAREYLALRSVGS 221
G+V +KD ++ L N SV + ++ +++ RE+ A+ ++ S
Sbjct: 1402 GKVDRRDKDVFSAKLFLPPNNEKLFKLKSVLHIRSTWHITRLMNITPQVREFQAVSALSS 1461
Query: 222 LPFKDLILS--ASEKSSGSQDQSWKIPGLLHEYIKENHNASQLEAIHEGL--LRK---AF 274
P + ILS AS++ SG + +P L +KE++N SQL AI L RK
Sbjct: 1462 SPLLESILSPAASDQHSG---RPVPLPEKLWRKLKEDYNESQLSAIKASLGDSRKDQHEI 1518
Query: 275 VLIQGPPGTGKTQTILGLLSAILHATPAR--VHSKGGLREIKRGPELPMHEKYNHWGRAS 332
LIQGPPGTGKT+TI+ ++SA+LH+ + V G + + +H AS
Sbjct: 1519 SLIQGPPGTGKTRTIVAIVSALLHSRESNEDVCRTSGNQRLS-----------HHAAVAS 1567
Query: 333 PWLVGANP----RDNIMPIDGDDGFFPTTGNELKPEVVNSSRRYRVRVLVCAPSNSALDE 388
W A RD + P + + RVLVCA SN+A+DE
Sbjct: 1568 SWQAMAYAKQIERDQLAPT-----------------------KAKARVLVCAQSNAAVDE 1604
Query: 389 IVLRLLNTGIRDENIRSYTPKIVRIGLK--AHHSVNSVAIDHLV---------------- 430
+V RL I + Y PK+VR G H V ID L+
Sbjct: 1605 LVGRLRE--IYSSTGQLYRPKLVRTGNARLVHPDSVPVFIDTLIKEDADTSQEDSAQELV 1662
Query: 431 ---------------------------------EQKRDDSAADKQKHGAT----RKDRDS 453
EQ+++D D +K T ++ R
Sbjct: 1663 SKLEQVTEKINEILRRKSEGVHDDSLMAKLTQLEQQKNDLNLDIRKSRKTFEISKERRRK 1722
Query: 454 IRSAILNEAVIVCSTLSFSGSALLSKLNHG--------FDVVIIDEAAQAVEPATLVPL- 504
+++ + +A IV +TL G + + FD V+IDEA QA+EPA+L+PL
Sbjct: 1723 LKNQNIRDADIVLTTLGGCGGDVYAACMDTSEKDTELFFDAVVIDEAGQALEPASLIPLQ 1782
Query: 505 --ATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEV 562
+ LVGDP QLPATV+S A + Y S+F+R Q+ GYPV ML TQYRMHP++
Sbjct: 1783 FLGGNHGRCVLVGDPKQLPATVLSQAASSVCYERSMFERFQKNGYPVTMLSTQYRMHPDI 1842
Query: 563 RSFPSREFYDEALEDGSDV-EDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINID 621
R FPS FY+ L DG+ V D +H+ R F P++FFD+ +G+E AG S N+D
Sbjct: 1843 RKFPSSYFYNNQLVDGASVLGDKRRSSFHKDRFFRPYTFFDVIDGQER--AGGSSVGNVD 1900
Query: 622 EVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVD 681
EVD + L+ + + YPQ ++ +I+PY+ Q+ + F+ FG + +++ T+D
Sbjct: 1901 EVDVAVKLYERFQAKYPQEIQPGRIGVITPYKQQLNMLKRAFQR-FGEKISSILEFNTID 1959
Query: 682 GCQGREKDVAIFSCVRAS-DKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWN 740
G QGRE D+ I S VRAS + K IGF+AD RRMNV +TR + S+ ++G A LR ++ W
Sbjct: 1960 GFQGREVDILILSTVRASLEPKGIGFVADIRRMNVALTRPRFSLWIIGSARALRSNRAWA 2019
Query: 741 NLVKSAEKQDCLFRVSKPYASFFSDENLESMRKNATTDNVQGADGHVPH 789
L++ A + ++ + KPY+ F+ +++ ++ VQG G P
Sbjct: 2020 ALLEDATSRGAVYPIQKPYSKAFNSRGDQNVTRDVDP-MVQGGGGTSPR 2067
>gi|396463537|ref|XP_003836379.1| similar to tRNA-splicing endonuclease [Leptosphaeria maculans JN3]
gi|312212932|emb|CBX93014.1| similar to tRNA-splicing endonuclease [Leptosphaeria maculans JN3]
Length = 1964
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 246/763 (32%), Positives = 378/763 (49%), Gaps = 80/763 (10%)
Query: 19 KIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKA 78
+ ILGW+YF +D + R ++ +V T++ +DY +TFEPLL E
Sbjct: 1070 RAILGWNYF---------HDGDFPPNSRPEI-YSKVLSTFRTPNDYQSTFEPLLTLEAWQ 1119
Query: 79 QIIQKKDEEEVQEWKLRLVMECGEADGFHL--PSVTYEADEVESISPNDLLLLSKEEFKE 136
++ ++E + + +++R+ D F ++T + ++ IS D++LLS+ +
Sbjct: 1120 GFVKAREENQARPYEVRITSRAS-VDAFQEIGSTMTQKENQEVMISEGDIILLSQSKSPS 1178
Query: 137 GSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSAVEK 196
G+ PT A R+Y +V N+ S R++ + L S+
Sbjct: 1179 GNE-PTCLA--------------RVY---KVKRKNQHIEVSYRVVPGNPL--SAALQPNN 1218
Query: 197 RLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIKEN 256
LF K+ S++ + REY AL+ + D I+ A + S +I L++ Y N
Sbjct: 1219 SLFGTKLQSITPLEREYGALKGLQYYDLCDEIIRAKPSPLLTYKDS-QIQPLINTY---N 1274
Query: 257 HNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLREIKRG 316
N +Q +AI L AF LIQGPPG+GKT+TI ++ AIL + LR
Sbjct: 1275 VNNAQAKAIKSALDNDAFTLIQGPPGSGKTKTITAIVGAILTDS---------LRTRGTT 1325
Query: 317 PELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNSSRRYRVRV 376
+P ++ N + +N + + + DG G + +V R ++V
Sbjct: 1326 INVPGQQRPNTATKKLLVCAPSNAAVDELVMRFMDGITTLNGEKRNVNIVRLGRSDAIKV 1385
Query: 377 LVCAPSNSALDEIVLRLLNTGIRD-ENIRSYTPKIVR----------------------- 412
V L+ +V + LN D +N KI +
Sbjct: 1386 EV---QEVTLETLVAKKLNLNSSDSKNDAEAKSKIFQEHKMISEQLKQAYMQRDTGEIKG 1442
Query: 413 -IGLKAHHSVNSVAIDHLVEQKRDDSAADKQKHGATRKDRDSIRS--AILNEAVIVCSTL 469
K +N++ + D+ D++K D D R+ +ILN+A IVC+TL
Sbjct: 1443 EAAAKLDDDINALRRRKTALGTKIDNVKDEEKIQNRTADLDRRRAQESILNDAHIVCATL 1502
Query: 470 SFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVA 529
S SG + L+ F+ VI+DEAAQ VE + L+PL GC + LVGDP QLP TV S A
Sbjct: 1503 SGSGHEMFQGLSIEFETVIVDEAAQCVEMSALIPLKYGCAKCILVGDPKQLPPTVFSKEA 1562
Query: 530 EHLGYGTSLFKRLQRAGYP--VKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR 587
Y SLF R+Q+ +P V +L TQYRMHPE+ FPS+ FYD L DG D+ +
Sbjct: 1563 ARFQYEQSLFVRMQK-NHPDDVHLLDTQYRMHPEISLFPSQTFYDGKLLDGGDMAGLRKK 1621
Query: 588 DWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLA 647
WH+ GP+ FFD+ +E+ P G S IN+ E+D + L+ +LIS YP ++
Sbjct: 1622 PWHQSMLLGPYRFFDVQGQQEAAPKGH-SLINMKEIDIAIQLYTRLISDYPDYDFKGKVG 1680
Query: 648 IISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFL 707
II+PY+ Q+++ + RF FG ++ +++D T D QGRE ++ IFSCVRAS IGFL
Sbjct: 1681 IITPYKSQLRELKARFMARFGEKTDEMIDFNTTDAFQGRESEIIIFSCVRASPAGGIGFL 1740
Query: 708 ADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQD 750
D RRMNVG+TRAKSS+ V+G + +L + W LV A+ +D
Sbjct: 1741 QDIRRMNVGLTRAKSSLWVLGNSQSLMRGEFWKKLVLDAKNRD 1783
>gi|302796659|ref|XP_002980091.1| hypothetical protein SELMODRAFT_444379 [Selaginella moellendorffii]
gi|300152318|gb|EFJ18961.1| hypothetical protein SELMODRAFT_444379 [Selaginella moellendorffii]
Length = 2265
Score = 338 bits (868), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 257/825 (31%), Positives = 400/825 (48%), Gaps = 153/825 (18%)
Query: 51 LREVKDTYKDVDDYLATFEPLLFEEVKAQIIQKKDE---EEVQEWKLRLVMECGEADGFH 107
L +V ++++V+ Y+ F PLL EE +AQ+ + +DE ++ ++ + +M D H
Sbjct: 1305 LVKVPLSFRNVEQYMEVFRPLLIEEFRAQLHRARDEFNADDTEKVGMVHLMSLERVDNLH 1364
Query: 108 LPSVTYEADEV---ESISPNDLLLLSKEEFKEGSTFPTTYAFALVEHCQANLLRLRMYLA 164
+ EA +V + + NDLLL+SK+ F E C + ++L
Sbjct: 1365 VARFKSEAGKVGASSACTENDLLLISKKPFLE---------------CPGS-----VHLL 1404
Query: 165 GEVIHINKDAVKSQRLL---NIHSLITSSVSAVEKRLFSLKICSLSTIAREYLALRSVGS 221
G+V +KD ++ L N SV + ++ +++ RE+ A+ ++ S
Sbjct: 1405 GKVDRRDKDVFSAKLFLPPNNEKLFKLKSVLHIRSTWHITRLMNITPQVREFQAVSALSS 1464
Query: 222 LPFKDLILS--ASEKSSGSQDQSWKIPGLLHEYIKENHNASQLEAIHEGL--LRK---AF 274
P + ILS AS++ SG + +P L +KE++N SQL AI L RK
Sbjct: 1465 SPLLEAILSPAASDQHSG---RPVPLPEKLWRKLKEDYNESQLSAIKASLGDSRKDQHEI 1521
Query: 275 VLIQGPPGTGKTQTILGLLSAILHATPAR--VHSKGGLREIKRGPELPMHEKYNHWGRAS 332
L+QGPPGTGKT+TI+ ++SA+LH+ + V G + + +H AS
Sbjct: 1522 SLVQGPPGTGKTRTIVAIVSALLHSRESNEDVCRTSGNQRLS-----------HHAAVAS 1570
Query: 333 PWLVGANP----RDNIMPIDGDDGFFPTTGNELKPEVVNSSRRYRVRVLVCAPSNSALDE 388
W A RD + P + + RVLVCA SN+A+DE
Sbjct: 1571 SWQAMAYAKQIERDQLAPT-----------------------KAKARVLVCAQSNAAVDE 1607
Query: 389 IVLRLLNTGIRDENIRSYTPKIVRIGLK--AHHSVNSVAIDHLV---------------- 430
+V RL I + Y PK+VR G H V ID L+
Sbjct: 1608 LVGRLRE--IYSPTGQLYRPKLVRTGNARLVHPDSVPVFIDTLIKEDADTSQEDSAQELV 1665
Query: 431 ---------------------------------EQKRDDSAADKQKHGAT----RKDRDS 453
EQ+++D D +K T ++ R
Sbjct: 1666 SKLEQVTEKINEILRRKSEGVHDDSLMAKLTQLEQQKNDLNLDIRKSRKTFEISKERRRK 1725
Query: 454 IRSAILNEAVIVCSTLSFSGSALLSKLNHG--------FDVVIIDEAAQAVEPATLVPL- 504
+++ + +A IV +TL G + + FD V+IDEA QA+EPA+L+PL
Sbjct: 1726 LKNQNIRDADIVLTTLGGCGGDVYAACMDTSEKDTELFFDAVVIDEAGQALEPASLIPLQ 1785
Query: 505 --ATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEV 562
+ LVGDP QLPATV+S A + Y S+F+R Q+ GYPV ML TQYRMHP++
Sbjct: 1786 FLGGNHGRCVLVGDPKQLPATVLSQAASSVCYERSMFERFQKNGYPVTMLSTQYRMHPDI 1845
Query: 563 RSFPSREFYDEALEDGSDV-EDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINID 621
R FPS FY+ L DG+ V D +H R F P++FFD+ +G+E AG S N+D
Sbjct: 1846 RKFPSSYFYNNQLVDGASVLGDKRRASFHNDRFFRPYTFFDVIDGQER--AGGSSVGNVD 1903
Query: 622 EVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVD 681
EVD + L+ + + YPQ ++ +I+PY+ Q+ + F+ FG + +++ T+D
Sbjct: 1904 EVDVAVKLYERFQAKYPQEIQPGRIGVITPYKQQLNMLKRAFQR-FGEKISSILEFNTID 1962
Query: 682 GCQGREKDVAIFSCVRAS-DKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWN 740
G QGRE D+ I S VRAS + K IGF+AD RRMNV +TR + S+ ++G A LR ++ W
Sbjct: 1963 GFQGREVDILILSTVRASLEPKGIGFVADIRRMNVALTRPRFSLWIIGSAMALRSNRAWA 2022
Query: 741 NLVKSAEKQDCLFRVSKPYASFFSDENLESMRKNATTDNVQGADG 785
L++ A + ++ + KPY+ F+ +++ ++ VQG G
Sbjct: 2023 ALLEDATSRGAVYPIQKPYSKAFNCRGDQNITRDVDP-MVQGGGG 2066
>gi|281202655|gb|EFA76857.1| putative splicing endonuclease [Polysphondylium pallidum PN500]
Length = 1423
Score = 334 bits (856), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 249/765 (32%), Positives = 381/765 (49%), Gaps = 109/765 (14%)
Query: 19 KIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKA 78
KIIL W N + +++ L+ + +++++ +Y+ F+PLL +E K
Sbjct: 603 KIILSW---------------NVEMLNQVDANLKVLPTSFENLSEYIQIFQPLLLQEFKG 647
Query: 79 QIIQKKDEEEVQEWKLRLVMECGEADG-FHLPSVTYEADEVESISPNDLLLLSKEEFKEG 137
Q++ K EE++ + V++ +G FH+ V + D E S DL+LL KE G
Sbjct: 648 QLL--KAVEELEPSGTQYVLDDVAREGEFHV--VLFFLDGDEEFSLEDLVLLQKEIL--G 701
Query: 138 STFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRL-LNIHSLITSSV---SA 193
F F +E+ G+ +K++ + + + H L +
Sbjct: 702 VKFE---VFGKIEN------------KGKKERKDKNSARCAYISVKFHQLEKIGLLKHMK 746
Query: 194 VEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILS-ASEKSSGSQDQSWKIPGLLHEY 252
++ + K+ SLST+ REYLAL VG +P I+S A ++ + + IP LH
Sbjct: 747 IKTQWNIQKLTSLSTVNREYLALHLVGKIPLGSYIISPALAITNQERTNNVVIPPALHNK 806
Query: 253 IKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLRE 312
+ N+SQ+EAI+ L+ F L+QGPPGTGKT+TI+ LLS +L
Sbjct: 807 LLSELNSSQMEAIYHSLIPHGFTLLQGPPGTGKTKTIMALLSVLLST------------- 853
Query: 313 IKRGPELPMHEKYNHWGRASPWLVGANPRDNIMP------IDGDDGFFPTTGNELKPEVV 366
P+ K N A P ++ P + + IDGD F GN P +
Sbjct: 854 -------PLDSKIN--STAPPKILVCAPSNAAVDEIASRIIDGD--MFDKDGNSYVPSAI 902
Query: 367 NS------SRRYR---VRVLVCAPSN----------SALDEIVLRLLNTGIRDENIRSYT 407
SR+ + + L+ SN S + + +L E+++
Sbjct: 903 RIGQPSAISRKVQQISLEYLLEKNSNDPSTSLNFEQSKIISVREKLAEINSSLESVKQKI 962
Query: 408 PKIVR-IGLKAHHSVNSV--------AIDHLVEQKRDDSAADKQKHGATRKDRDSIRSAI 458
+ R +G + +S D L ++ + ++K+ R ++ ++
Sbjct: 963 STLQRSLGTSLGTATDSTRDLTTLYHEKDRLFKEIQATKDSEKKVSDVLESARKNMAHSL 1022
Query: 459 LNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPV 518
LN+ I+ STLS SG FDVVIIDEAAQAVEP+TL+PL + LVGDP
Sbjct: 1023 LNKCNIILSTLSGSGHQETFSAIKKFDVVIIDEAAQAVEPSTLIPLKHNVMKCILVGDPN 1082
Query: 519 QLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDG 578
QLP T+IS +A Y TSLF+RL G P ++LK QYRMHP + FPSR FY LEDG
Sbjct: 1083 QLPPTIISRMASQYQYETSLFQRLSSCGIPQQVLKVQYRMHPSISRFPSRHFYMNVLEDG 1142
Query: 579 SDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYP 638
+V++YT + + R FGPF F+DI++ E G S N+ E V LL L + +P
Sbjct: 1143 PNVKNYTEEFYKDPR-FGPFIFYDIYDSNEESGPGH-SLKNVTEAKLVALLITNLENSFP 1200
Query: 639 QLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRA 698
+K S + +I+PY+ QV + + R + +D+++VDG QGREKD+ IFSCVRA
Sbjct: 1201 NIKKS--IGVITPYKQQVHEIKRRISPV-----NQDIDVSSVDGFQGREKDIIIFSCVRA 1253
Query: 699 SDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLV 743
+IGFL+D RRMNVG+TRA+SS++V+G ++ L+ + W LV
Sbjct: 1254 HRGGTIGFLSDVRRMNVGLTRARSSLIVIGNSNLLKLNPDWEALV 1298
>gi|308198102|ref|XP_001386840.2| DEAD-box type RNA helicase [Scheffersomyces stipitis CBS 6054]
gi|149388861|gb|EAZ62817.2| DEAD-box type RNA helicase [Scheffersomyces stipitis CBS 6054]
Length = 1999
Score = 332 bits (851), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 264/840 (31%), Positives = 395/840 (47%), Gaps = 164/840 (19%)
Query: 21 ILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKAQI 80
IL W+Y +S D++S K E+K Y DV DY+ T EPLL E I
Sbjct: 1067 ILKWNYNS--NDSFPTGDRDSYK---------EIKSQYDDVKDYVKTTEPLLMLECWQGI 1115
Query: 81 IQKKDEEEVQEWKLRLVMECGEADGFH--LPSVTYEADEVESISPNDLLLLS--KEEFKE 136
K + + +++ LV DGF SV + +DLL+L +EEF
Sbjct: 1116 QSAKQTGQEKPFEI-LVGSRTSVDGFFDVYGSVKKSVIADRKVGDSDLLVLGFVQEEFST 1174
Query: 137 GSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVK-SQRLLNIHSLITSSVSAVE 195
AL + +A R + E+ N D + R+ S++ V +
Sbjct: 1175 PE--------ALGHYLKAPTTRTCLAKVREIKSANPDYNDITVRVYPSGSMM--GVLTPK 1224
Query: 196 KRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSA--SEKSSGSQDQSWKIPGLLHEYI 253
++ +++I + TI REY +L+ + D IL+A +E S ++ K LL+ Y
Sbjct: 1225 SQIVAMRISQMVTIEREYTSLKGLQYYDLCDSILAAKPNEPVEISDAEAMK---LLNIY- 1280
Query: 254 KENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLREI 313
+ N SQ +AI + F LIQGPPGTGKT+TILG++ L
Sbjct: 1281 --DVNKSQAKAIIGSYNSEGFSLIQGPPGTGKTKTILGIVGYSLSQQ------------- 1325
Query: 314 KRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNSSRRYR 373
+ EK I+ ID +G +GNE KP
Sbjct: 1326 -------VDEKI------------------IIKIDQGNGNV-ISGNEKKP---------- 1349
Query: 374 VRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIG------------------- 414
+VL+CAPSN+A+DE+V+RL + G+R+ PK+VR+G
Sbjct: 1350 -KVLICAPSNAAVDELVVRLRD-GVRNSRGEHIIPKLVRMGRSDAINAAVKDLTLEELVE 1407
Query: 415 -----------------LKAHHSVNSVAIDHLVEQKRDDSAADKQ--------------- 442
++A HS D+L + + DS + K+
Sbjct: 1408 KELQAKAMNTDTSTDPNIRAEHSKCIEERDNLRRKLQTDSLSSKEIDELESALREINKKR 1467
Query: 443 ----KHGATRKDRDSI------------RSAILNEAVIVCSTLSFSGSALLSKLNHGFDV 486
K +++R SI ++ ILN+A I+CSTLS S L+ + FD
Sbjct: 1468 TELGKQLDLQRERVSIAYRTREIERRNAQAKILNDAQIICSTLSGSAHDFLANMGITFDQ 1527
Query: 487 VIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAG 546
V+IDEA Q VE ++++PL GCK+ +VGDP QLP TV+S A Y SLF R+Q+
Sbjct: 1528 VVIDEACQCVELSSIIPLRYGCKKCIMVGDPNQLPPTVLSQAAASFNYEQSLFVRMQQNN 1587
Query: 547 -YPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDI-- 603
V +L QYRMHP++ +FPS +FY L+DG + R WH P+ FFDI
Sbjct: 1588 PNSVYLLDVQYRMHPQISAFPSAQFYQSRLKDGEGMAAKNERPWHSQYPLSPYRFFDIVS 1647
Query: 604 -HEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQER 662
H+ E S S N E L L KL+++ P+ + S ++ IISPY+ Q+K ++
Sbjct: 1648 RHQRNEL----SRSLFNTGEARVALELVEKLMTLLPEDQFSGRIGIISPYKEQIKTLRDV 1703
Query: 663 FKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKS 722
F + +G +D TVDG QG+EK++ I SCVRASD ++GFL+D RRMNV +TRA++
Sbjct: 1704 FIKKYGYSITTQIDFNTVDGFQGQEKEIIIMSCVRASDNGNVGFLSDVRRMNVALTRART 1763
Query: 723 SILVVGCASTLREDKHWNNLVKSAEKQDCLFRVSKPYASFFSDENLESMRKNATTDNVQG 782
++ ++G +L +K WN L+ A ++C VS+ Y F S + ++ K +N QG
Sbjct: 1764 TLWILGNKESLMRNKIWNKLLTDATDRNC---VSQAYPGFLSSASEQAPGKRKVVENRQG 1820
>gi|452989270|gb|EME89025.1| hypothetical protein MYCFIDRAFT_55523 [Pseudocercospora fijiensis
CIRAD86]
Length = 1999
Score = 328 bits (840), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 257/923 (27%), Positives = 413/923 (44%), Gaps = 208/923 (22%)
Query: 19 KIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKA 78
+IILGWD F N V+++++D Y TFEPLL E
Sbjct: 1074 RIILGWDVFYSGDYPPGHNSHE----------FSTVENSFRDPITYQNTFEPLLILEAWQ 1123
Query: 79 QIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVT-YEADEVESISPNDLLLLSKEEFKEG 137
+ ++++E + +++++ + S+ ++ + S+S D++L S+
Sbjct: 1124 GMAKEREESSSKPYEIKVQNRSNVDQFLEISSIIGHQENRDLSLSEGDIILFSR------ 1177
Query: 138 STFPTTYAFALVEHCQANLLRLRMYLAG-EVIHINKDAVKSQRLLNIHSLITSSVSAVEK 196
S P T A A HC A + +++ A E+++ +++ SL + ++
Sbjct: 1178 SKKPLTDAEA--PHCLARIYKVKRQKAHLEIVY---------QVMPGGSLAPQLTT--QQ 1224
Query: 197 RLFSLKICSLSTIAREYLALRSVGSLPFKDLILSA--------SEKSSGSQDQSWKIPGL 248
++ +KI S++ + REY AL+ + + I+ A SE+ S W
Sbjct: 1225 LIYGVKIQSITPLEREYGALKGLTYYDLCNQIVRAKPSSKINFSERQINSYRDCW----- 1279
Query: 249 LHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKG 308
N NA+Q EA++ L + F LIQGPPG+GKT+TI+ ++ +L T
Sbjct: 1280 -------NLNAAQSEAVNGALENEGFTLIQGPPGSGKTKTIVAIVGGLLSQT-------- 1324
Query: 309 GLREIKRGPELPMHEKYNHWGRASPWLVGANPRDNI-MPIDGDDGFFPTTGNELKPEVVN 367
+ NPR + + + F
Sbjct: 1325 ---------------------------LANNPRGATRISVPAANSNF------------- 1344
Query: 368 SSRRYRVRVLVCAPSNSALDEIVLRL------------------------LNTGIRDENI 403
+S ++LVCAPSN+A+DE+V+RL +NT +RD +
Sbjct: 1345 ASDSASKKLLVCAPSNAAVDELVIRLKQGVKTKNGQNHAINVVRLGRSDAINTQVRDVTM 1404
Query: 404 RSYTPKIVRIG--------------LKAHHSVNSV------------------------- 424
K + G K H +++
Sbjct: 1405 DELVAKKLGGGNEADEKQRQRNAELFKEHEQISAQLRELYAQRDAADAGEKMPEKERKTL 1464
Query: 425 --AIDHLVEQK-----RDDSAADKQKHGATRK--DRDSIRSAILNEAVIVCSTLSFSGSA 475
+I H+ +K R D+ D +++ + +R + A+L++A ++C+TLS SG
Sbjct: 1465 DDSIVHVRRRKAELGARIDNVKDSERNAGREQELNRKRAQQAVLDQAHVICATLSGSGHD 1524
Query: 476 LLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYG 535
+ LN F+ V+IDEAAQ VE ++L+PL GC + +VGDP QLP TV S A Y
Sbjct: 1525 MFQSLNIEFETVVIDEAAQCVEMSSLIPLKYGCIKCIMVGDPKQLPPTVFSKEAAKFQYE 1584
Query: 536 TSLFKRLQRAGYP--VKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYR 593
SLF R+Q +P V +L TQYRMHP++ FPSR FYD L+DG + + WH+
Sbjct: 1585 QSLFVRMQN-NFPDEVHLLDTQYRMHPDISLFPSRSFYDGLLKDGPSMAKLRAQPWHKSA 1643
Query: 594 CFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYR 653
P+ FFD+ ES P G S +N E+ LL+ +L + +P +S++ II+PY+
Sbjct: 1644 LLAPYRFFDVAGQHESAPKGH-SLVNRAEIAIAELLYDRLRADFPDYDFTSKIGIITPYK 1702
Query: 654 HQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRM 713
Q+++ + RF +G + ++ T D QGRE ++ IFSCVRAS IGFL D RRM
Sbjct: 1703 SQLRELKNRFASKYGQQIFDFIEFNTTDAFQGRESEIIIFSCVRASPAGGIGFLQDIRRM 1762
Query: 714 NVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFR------VSKPYASFFSDEN 767
NVG+TRAKSS+ V+G + +L ++W LV+ A ++DCL + +P + F + N
Sbjct: 1763 NVGLTRAKSSLWVLGNSESLMRGQYWKRLVEDARERDCLTSGDVKRMLHQPSSQFPASNN 1822
Query: 768 ------------LESMRKNATTDNVQGADGHVPHDDETMHYANTGDADQGQA-----DDI 810
E + +A D P E +A DA++ +DI
Sbjct: 1823 RTLSMLDASNIKTEPTKPSAKADGDHNDAASKPRQAERTPFAKAADAEKMDGIRYRFEDI 1882
Query: 811 D---------NADGDAEMYDADE 824
+AD D EM DAD+
Sbjct: 1883 KKSKHKAAIPSADDDVEMKDADQ 1905
>gi|365991108|ref|XP_003672383.1| hypothetical protein NDAI_0J02480 [Naumovozyma dairenensis CBS 421]
gi|343771158|emb|CCD27140.1| hypothetical protein NDAI_0J02480 [Naumovozyma dairenensis CBS 421]
Length = 2238
Score = 325 bits (833), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 245/814 (30%), Positives = 392/814 (48%), Gaps = 86/814 (10%)
Query: 21 ILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKAQI 80
+L WDY R +N D G +VKD +++ DY PLL E +
Sbjct: 1088 VLQWDYTR----------RNEYPDDAGIETYADVKDQFENTTDYQKIMRPLLLLESWQGL 1137
Query: 81 IQKKDEEEVQEWKLRLVMECGEADGFHL-PSVTYEADEVESISPNDLLLLSKEEFKEGST 139
+D EE + + + + +D + + S++ A + +S DL++L+ ++
Sbjct: 1138 CSARDREENRGFTILIGNRTAVSDFYEVYASISKNAFQEVGVSETDLIVLAYLPDMRPNS 1197
Query: 140 FPTTYAFALVEH-CQANLLRLRMYLAGEV-----IHINKDAVKSQRLLNIHSLITSSVSA 193
T F E+ C A + ++ G V IH N K + L I S I +
Sbjct: 1198 RLTNDDFKNAENTCLAKVKSIKYVKGGNVDLSLRIHRNH---KFAKFLTIRSEIQA---- 1250
Query: 194 VEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYI 253
+K+ ++T+ REY L + + IL A S + +I + +Y
Sbjct: 1251 -------VKVMQMTTVEREYQTLEGLEYYDLVNQILLAVPTPSVTVSPE-EIKDVKEKY- 1301
Query: 254 KENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLREI 313
N N SQ EAI + + F LIQGPPGTGKT+TILG++ L + ++ S ++
Sbjct: 1302 --NLNTSQAEAIVHTVSNEGFSLIQGPPGTGKTKTILGIVGYFL--STRKILSSNIIKTP 1357
Query: 314 KRGPELPMHEKYNHWGRASPWLVGA--NPRDNIMPIDGDDGFFPTTGNELKPEVVNSSRR 371
G +L + + + L+ A N + + I +G + G KP +V R
Sbjct: 1358 TDGSKLSI----DQLLKKQKVLICAPSNAAVDEICIRLKEGVYDKNGRLFKPNLV---RI 1410
Query: 372 YRVRVLVCAPSNSALDEIVLR-------------------------------LLNTGIRD 400
R V+ A N L+E+V R LN
Sbjct: 1411 GRSDVVNVAIKNLTLEELVDRKVAEKNYEFTMDPDLERNFSSSVSKRRELRAQLNNAETA 1470
Query: 401 ENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILN 460
T +I ++ L+ S I+ L ++K + + H DR + ++ IL
Sbjct: 1471 TTSTLSTEEIAKLQLEIREL--SKVINDLGKKKDELRERNSVNHRNRDLDRRNAQAQILA 1528
Query: 461 EAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQL 520
+ ++CSTLS + +L+ L FD VI+DEA Q E ++++PL G K+ +VGDP QL
Sbjct: 1529 NSEVICSTLSGAAHDVLATLGIKFDTVIVDEACQCTELSSIIPLRYGGKRCIMVGDPNQL 1588
Query: 521 PATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSD 580
P TV+S A + Y SLF R+++ P +L QYRMHP++ FPS EFY L+DG
Sbjct: 1589 PPTVLSGAASNFKYNQSLFVRMEKNSSPY-LLNVQYRMHPDISKFPSEEFYQGKLKDGPS 1647
Query: 581 VEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMY-PQ 639
++ R WH+ F P+ FFDI GK+ Q + + S++N++E+ + L KL + + +
Sbjct: 1648 MDIINRRPWHQMVPFAPYKFFDISTGKQQQNSKTMSYVNLEEIQVAIELVDKLFNEFDAK 1707
Query: 640 LKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRAS 699
+ + ++ +ISPYR Q+++ + F FG K +D T+DG QG+EK++ + SCVRA
Sbjct: 1708 IDFTGKIGVISPYREQMQRMRREFTRYFGGSISKSIDFNTIDGFQGQEKEIILISCVRAD 1767
Query: 700 D-KKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRVSKP 758
D K S+GFL D+RRMNV TRAK+S+ ++G +L ++K W +L+ A +DCL V+KP
Sbjct: 1768 DTKTSVGFLKDFRRMNVAFTRAKTSMWILGHQQSLLKNKLWKHLINDARSRDCLV-VAKP 1826
Query: 759 YASFFSDENLESMRKNATTDNVQGADGHVPHDDE 792
F + + L + R A + DG+ PH E
Sbjct: 1827 --GFLNGKTLSNSRL-AELKEIPQMDGYDPHKSE 1857
>gi|67596220|ref|XP_666063.1| SEN1 protein [Cryptosporidium hominis TU502]
gi|54656975|gb|EAL35833.1| SEN1 protein [Cryptosporidium hominis]
Length = 994
Score = 325 bits (833), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 272/849 (32%), Positives = 413/849 (48%), Gaps = 126/849 (14%)
Query: 13 SIFRFCKIILGWDYFRLVKE---SQERND-KNSKKVDRGKLGLREVKDTYKDVDDYLATF 68
SI F I+L WD+F+ +KE ER D NS + +R+ + +YL F
Sbjct: 28 SISNFDSILLAWDFFKDIKEEVFGVERPDIVNSFDISGETCQVRDNPTRFATSKEYLDYF 87
Query: 69 EPLLFEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTY--------EADEVES 120
PL E + Q IQ+ + E+ ++ + + + L + ADE+
Sbjct: 88 FPLFLLECQ-QSIQRAKQIEMSDFDTFSLKDIRANNSNKLEESNFLTLVFERRRADELIY 146
Query: 121 ISPNDLLLL------SKEEFKEGSTFPTTYAFALVEHCQAN------LLRLRMYLAGEVI 168
SP DL+L+ EEF + + +V+ +N +L Y+ + +
Sbjct: 147 FSPQDLVLIIFDPEFKSEEFDDN----LKHVIGVVQGSNSNGRVTITVLNPNYYVDDKTM 202
Query: 169 HINKDAVKSQ-RLLNIHSLITSSVSAVE--------------KRLFSLKICSLSTIAREY 213
+ SQ RL++ + S+ E + + +I S ST RE
Sbjct: 203 KRKIASFTSQDRLVSRMKSFSDSLGNKEFGQDTSNALSQSSSQSWYLSRITSFSTNYREL 262
Query: 214 LALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIKENHNASQLEAIHEGLLRKA 273
L S+ L KD +L K + + KIP LL E +KE +N SQ+ A++E L
Sbjct: 263 SGLFSLPDLLLKDELLCRGLKC----EHTMKIPTLLQEKLKEKYNPSQMSALNECLKYSG 318
Query: 274 FVLIQGPPGTGKTQTILGLLSAILHAT-PARVHSKGGLRE------IKRGPELPMHEKYN 326
LIQGPPGTGKT TI+G++SA+L +T + S+ E ++ E + E Y
Sbjct: 319 ISLIQGPPGTGKTTTIIGIISALLSSTFEVKNVSEDSSNEENIETKKRKSNEENIPEMYA 378
Query: 327 HWGRASPWLVGANPRDNIMPIDGDDG---FFPTTGNELKPEVVNSSRRYR--VRVLVCAP 381
RA PW D + D + F E+K +++S R ++LVCAP
Sbjct: 379 PILRAKPWCYDP---DYVPWYDSEMKNLRIFRNNKVEIKKVTLDTSSRKMGPRKLLVCAP 435
Query: 382 SNSALDEIVLRLLNT------GIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQKRD 435
SN+A+D IV +L+ GI D Y+P +VR G H ++ +++++ ++Q+
Sbjct: 436 SNAAIDAIVRKLVRNPITGEGGILDNTGEYYSPTLVRAGPNFHPDLHDLSLEYKLQQRLQ 495
Query: 436 DSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSA-LLSKLNHG----------- 483
+ D + ++ R + IL E+ IVC+TLS GS L+S L+
Sbjct: 496 RNGFDAK--NCKQEIRQQTQWKILQESQIVCATLSVCGSKELISILSQNGRMQAAGSGDR 553
Query: 484 ----FDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLF 539
FD VIIDEA+Q VE +TL+PL GCK++ LVGDP QLPATV+S A Y SLF
Sbjct: 554 TALSFDTVIIDEASQGVELSTLIPLKLGCKRLILVGDPKQLPATVLSRRAIERKYDISLF 613
Query: 540 KRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR----DWHEYRCF 595
+RLQ +G V ML QYRMHP++ +FPS+ FYD L D D+ + TR W + F
Sbjct: 614 QRLQMSGQQVVMLSVQYRMHPQISAFPSKHFYDGELHDYKDILE--TRAPVVAWQDIPIF 671
Query: 596 GPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKL-ISMY--------------PQL 640
PF+FF ++ +E + S N E DFV + L + +Y P
Sbjct: 672 KPFTFFSVNSEEEQGKSIS----NPLEADFVCQILELLGLILYEHQKKLTENTDLGEPSK 727
Query: 641 KSSSQLAIISPYRHQVKQFQERFKETFGVESQKV--VDITTVDGCQGREKDVAIFSCVR- 697
+ ++A+ISPY QVK +++ KE FG+ + + +D++TVDG QG+EKD IFS VR
Sbjct: 728 RWYERIAVISPYNEQVKIIRKKIKEKFGLSPETICPIDVSTVDGFQGQEKDFIIFSVVRS 787
Query: 698 ----------ASDKKS-IGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSA 746
A D+K+ GF+AD RR+NV +TRAK ++ +VG + L + W +L +
Sbjct: 788 QYIEEDSLNNADDRKTNAGFIADRRRINVALTRAKYNLWIVGNSRYLLGNPEWRSLWDYS 847
Query: 747 EKQDCLFRV 755
K + F V
Sbjct: 848 CKNNSQFSV 856
>gi|430813344|emb|CCJ29314.1| unnamed protein product [Pneumocystis jirovecii]
Length = 1924
Score = 325 bits (832), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 254/800 (31%), Positives = 385/800 (48%), Gaps = 94/800 (11%)
Query: 54 VKDTYKDVDDYLATFEPLLFEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGFHL-PSVT 112
V+ ++ Y+ TFEPLL E QII+ K+E Q +K++++ + L ++
Sbjct: 1119 VEYKFQTSQTYMNTFEPLLLLECWQQIIKAKEENTDQSFKIKIINRASVDEFIDLYVFIS 1178
Query: 113 YEADEVESISPNDLLLLSK--EEFKEGSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHI 170
YE IS +D+L++S + KE +T + + L LR Y + E+
Sbjct: 1179 YEIFYSVVISDSDILVISNTSKPLKEVNTISCLAKVQAISKKDSIELTLRTYPSNEM--- 1235
Query: 171 NKDAVKSQRLLNIHSLITSSVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILS 230
S + L+ +K+ SL TI REY AL+S+ L +D I++
Sbjct: 1236 ------------------SILLRPNNELYGVKLFSLITIQREYSALKSLEYLELRDDIIN 1277
Query: 231 ASEKSSGSQDQSWKIPGLLHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTIL 290
A + S +I + Y N N Q EAI F LIQGPPGTGKT+TIL
Sbjct: 1278 AKAQP-FPLVPSNEIQSAMLAY---NVNKPQAEAIVGVTNSTGFHLIQGPPGTGKTRTIL 1333
Query: 291 GLLSAILHATPARVHSKGGLREIKRGPELPMHEKYNHWGRASPWLVGA--NPRDNIMPID 348
G+++A L + + G ++ K P +S LV A N + + +
Sbjct: 1334 GMINAFLSKSKNKSACLGKVQ--KDSP------------VSSKILVCAPSNAAIDQIVLR 1379
Query: 349 GDDGFFPTTGNELKPEVVNSSRRYRVRVLVCAPSNSALDEIV-LRLLNTGIRDENIRSYT 407
GF G P++V + V + +LD ++ + L + ++ E+ T
Sbjct: 1380 LKQGFRSPGGTIYYPKIVRVGSNVAINV-----KDVSLDNLIEIELAKSSVKIEHDYQAT 1434
Query: 408 PKIV-----RIGLKAHHSVNSVAIDHLVEQKRD--------------------DSAADKQ 442
++V LK S+ D L EQ++ D D+Q
Sbjct: 1435 NQVVLREQLNEILKQRDSLRKQLEDQLSEQEKGSIEVKLKSLNLQKNNLGQQLDELRDQQ 1494
Query: 443 KHGATRKD--RDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPAT 500
+ + D R I++ IL A I+CSTLS SG L F VIIDEAAQ +E +T
Sbjct: 1495 NNTSRSLDISRHKIQTDILTNADIICSTLSGSGYEFFGNLAFDFSTVIIDEAAQCIELST 1554
Query: 501 LVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQR-AGYPVKMLKTQYRMH 559
++PL GCK LVGDP QLP TV S +A + Y SLF R+Q+ V ML QYRMH
Sbjct: 1555 IIPLRYGCKLCILVGDPNQLPPTVFSQMATNYSYEQSLFVRMQKNCPSSVHMLSIQYRMH 1614
Query: 560 PEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWIN 619
P + FPS+ FY L + +E+ T R WH+ FGP+ FFDIH G E + + S N
Sbjct: 1615 PCISQFPSKFFYSNRLINDEGIEEKTKRSWHQVDLFGPYRFFDIH-GYEDETSRSP--FN 1671
Query: 620 IDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITT 679
+ E LL++ +I +P + + II+PY+ Q+ + +E F + +G K +D T
Sbjct: 1672 LMEARATLLIYDAIIRSFPSINFNGYFGIITPYKQQLNKIKELFIKKYGDSILKNIDFNT 1731
Query: 680 VDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHW 739
VDG QG+EKD+ + SCVR+S K IGFL+D RRMNV +TRAKSS++++G TL +W
Sbjct: 1732 VDGFQGQEKDIIMLSCVRSS-AKGIGFLSDIRRMNVSLTRAKSSMIILGNVETLSGHFYW 1790
Query: 740 NNLVKSAEKQDCLFRVSKPYASFFSDENLESMRKNATTDNVQGADGHVPHDDETMHYANT 799
+L++ AE++ L + F D + KNA + + H+ E + +N
Sbjct: 1791 RSLIEDAEQRGLLTK--------FDDILFGVLEKNA--KHASFCNSSTTHNKEKI--SNE 1838
Query: 800 GDADQGQADDIDNADGDAEM 819
D+ Q + + N D+E+
Sbjct: 1839 IDSVQEDSGIVKNFIEDSEI 1858
>gi|66361936|ref|XP_627932.1| sen1p/ NAM7 like superfamily I RNA helicase [Cryptosporidium parvum
Iowa II]
gi|46227554|gb|EAK88489.1| sen1p/ NAM7 like superfamily I RNA helicase [Cryptosporidium parvum
Iowa II]
Length = 994
Score = 323 bits (828), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 269/849 (31%), Positives = 411/849 (48%), Gaps = 126/849 (14%)
Query: 13 SIFRFCKIILGWDYFRLVKE---SQERNDK-NSKKVDRGKLGLREVKDTYKDVDDYLATF 68
SI F I+L WD+F+ +KE ER D NS + +R+ + +YL F
Sbjct: 28 SISNFDSILLAWDFFKDIKEEVFGVERPDVVNSFDISGETCQVRDNPTRFATSKEYLDYF 87
Query: 69 EPLLFEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTY--------EADEVES 120
PL E + Q IQ+ + E+ ++ + + + L + ADE+
Sbjct: 88 FPLFLLECQ-QSIQRAKQIEMSDFDTFSLKDIRANNSNKLEESNFLTLVFERRRADELIY 146
Query: 121 ISPNDLLLL------SKEEFKEGSTFPTTYAFALVEHCQAN------LLRLRMYLAGEVI 168
SP DL+L+ EEF + + +V+ +N +L Y+ + +
Sbjct: 147 FSPQDLVLIIFDPEFKSEEFDDN----LKHVIGVVQGSNSNGRVTITVLNPNYYVDDKTM 202
Query: 169 HINKDAVKSQ-RLLNIHSLITSSVSAVE--------------KRLFSLKICSLSTIAREY 213
+ SQ RL++ + S+ E + + +I S ST RE
Sbjct: 203 KRKIASFTSQDRLVSRMKSFSDSLGNKEFGQDTSNALSQSSSQAWYLSRITSFSTNYREL 262
Query: 214 LALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIKENHNASQLEAIHEGLLRKA 273
L S+ L KD +L + + + KIP LL E +KE +N SQ+ A+ E L
Sbjct: 263 SGLFSLPDLLLKDELLC----RGLTCEHTMKIPTLLQEKLKEKYNPSQMSALSECLKYSG 318
Query: 274 FVLIQGPPGTGKTQTILGLLSAILHAT-PARVHSKGGLRE------IKRGPELPMHEKYN 326
LIQGPPGTGKT TI+G++SA+L +T + S+ E ++ E + E Y
Sbjct: 319 ISLIQGPPGTGKTTTIIGIISALLSSTFEVKNASEDSSDEENIETKKRKSNEENISEMYA 378
Query: 327 HWGRASPWLVGANPRDNIMPIDGDDG---FFPTTGNELKPEVVNSSRRYR--VRVLVCAP 381
RA PW D + D + F E+K +++S R ++LVCAP
Sbjct: 379 PILRAKPWCYDP---DYVPWYDSEMKNLRIFRHNKVEIKKVTLDTSSRKMGPRKLLVCAP 435
Query: 382 SNSALDEIVLRLLNT------GIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQKRD 435
SN+A+D IV +L+ GI D Y+P +VR G H ++ +++++ ++Q+
Sbjct: 436 SNAAIDAIVRKLVRNPITGEGGILDNTGEYYSPTLVRAGPNFHPDLHDLSLEYKLQQRLQ 495
Query: 436 DSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSA-LLSKLNHG----------- 483
+ D + ++ R + IL E+ IVC+TLS GS L+S L+
Sbjct: 496 RNGFDAK--NCKQEIRQQTQWKILQESQIVCATLSVCGSKELISILSQNGRMQAAGSGDR 553
Query: 484 ----FDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLF 539
FD VIIDEA+Q VE +TL+PL GCK++ LVGDP QLPATV+S A Y SLF
Sbjct: 554 TALSFDTVIIDEASQGVELSTLIPLKLGCKRLILVGDPKQLPATVLSRRAIERKYDISLF 613
Query: 540 KRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR----DWHEYRCF 595
+RLQ +G V ML QYRMHP++ +FPS+ FYD L D D+ TR W + F
Sbjct: 614 QRLQMSGQQVVMLSVQYRMHPQISAFPSKHFYDGELHDYKDI--LKTRAPVVTWQDIPIF 671
Query: 596 GPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKL-ISMY--------------PQL 640
PF+FF ++ +E + S N+ E DFV + L + +Y P
Sbjct: 672 KPFTFFSVNSEEEQGKSIS----NLLEADFVCQILELLGLILYEHQKKLTENTDLGEPSK 727
Query: 641 KSSSQLAIISPYRHQVKQFQERFKETFGVESQKV--VDITTVDGCQGREKDVAIFSCVRA 698
+ ++A+ISPY QVK +++ KE FG+ + + +D++TVDG QG+EKD IFS VR+
Sbjct: 728 RWYERIAVISPYNEQVKIIRKKIKEKFGLSPETICPIDVSTVDGFQGQEKDFIIFSVVRS 787
Query: 699 ------------SDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSA 746
+ K + GF+AD RR+NV +TRAK ++ +VG + L + W +L +
Sbjct: 788 QYIEEDSLNNADNRKTNAGFIADRRRINVALTRAKYNLWIVGNSRYLLGNPEWRSLWDYS 847
Query: 747 EKQDCLFRV 755
K + F V
Sbjct: 848 CKNNSQFSV 856
>gi|452003720|gb|EMD96177.1| hypothetical protein COCHEDRAFT_1201038 [Cochliobolus heterostrophus
C5]
Length = 1973
Score = 322 bits (826), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 230/762 (30%), Positives = 368/762 (48%), Gaps = 79/762 (10%)
Query: 19 KIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKA 78
+ IL W+YF ++ + R +L +V +T++ +DY TFEPLL E
Sbjct: 1065 RTILSWNYF---------HEGDFPPKSRPEL-YSKVLNTFRTPNDYQNTFEPLLTLEAWQ 1114
Query: 79 QIIQKKDEEEVQEWKLRLVMECGEADGFHL--PSVTYEADEVESISPNDLLLLSKEEFKE 136
++ ++E + + +++R+ D F ++T+ + IS D++L S+ +
Sbjct: 1115 GFVKAREENQARPYEIRITSRAA-VDMFQEIGSTMTHVENREVFISEGDIILFSQSK-NP 1172
Query: 137 GSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSAVEK 196
+ PT C A + R++ + I ++ V L +S
Sbjct: 1173 SAEEPT---------CLARVFRVKR--KQQHIEVSYRVVPGNPL--------NSALQPNN 1213
Query: 197 RLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIKEN 256
L K+ S++ + REY AL+ + D I+ A + S +I L+ Y N
Sbjct: 1214 TLLGTKLQSITPLEREYGALKGLQYYDLCDEIIRAKPSPLLTYKDS-QIQPLISNY---N 1269
Query: 257 HNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLREIKRG 316
N +Q +AI + AF LIQGPPG+GKT+TI ++ AIL + LR
Sbjct: 1270 VNTAQAKAIKSAIDNDAFTLIQGPPGSGKTKTITAIVGAILSDS---------LRNRGTA 1320
Query: 317 PELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNSSRRYRVRV 376
+P ++ + +N + + + DG G K +V R ++
Sbjct: 1321 ISVPGQQRSEAASKKLLVCAPSNAAVDELVMRFKDGIKTLNGESRKVNIVRLGRGDAIKA 1380
Query: 377 LVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIV------------------------R 412
V + L+E+V + L D + T K+ +
Sbjct: 1381 SV---QDVTLEELVNQRLGVDPSDGKDKEATQKLFQDHKKISDQLKQAYQQRDSGEVKGK 1437
Query: 413 IGLKAHHSVNSVAIDHLVEQKRDDSAADKQKHGATRKD--RDSIRSAILNEAVIVCSTLS 470
K +N++ + D+ D +K + D R + A+LNEA ++C+TLS
Sbjct: 1438 AAAKLEEDINALRRQKTALGTKIDNVKDDEKLASRNADLNRRRAQEAVLNEAHVICATLS 1497
Query: 471 FSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAE 530
SG + L+ F+ VI+DEAAQ VE + L+PL GC + LVGDP QLP TV S A
Sbjct: 1498 GSGHEMFQGLSIEFETVIVDEAAQCVEMSALIPLKYGCAKCILVGDPKQLPPTVFSKEAA 1557
Query: 531 HLGYGTSLFKRLQRAGYP--VKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRD 588
Y SLF R+Q+ +P V +L TQYRMHPE+ FPS+ FYD L DG D+ +
Sbjct: 1558 RFQYEQSLFVRMQK-NHPDDVHLLDTQYRMHPEISLFPSQTFYDGRLLDGGDMAGLRKQP 1616
Query: 589 WHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAI 648
WH+ GP+ FFD+ + + P G S IN+ E+ + L+ +L S YP ++ I
Sbjct: 1617 WHQSMVLGPYRFFDVKGQQAAAPKGH-SLINVAEIKVAMQLYKRLTSDYPDYDFKGKVGI 1675
Query: 649 ISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLA 708
I+PY+ Q+++ ++ F + +G + +D T D QGRE +V IFSCVRAS IGFL
Sbjct: 1676 ITPYKSQLRELKQSFMQVYGQSIIEDIDFNTTDAFQGRESEVIIFSCVRASPAGGIGFLQ 1735
Query: 709 DYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQD 750
D RRMNVG+TRAKSS+ V+G + +L+ ++WN L+ +A++++
Sbjct: 1736 DIRRMNVGLTRAKSSLWVLGNSESLQRGQYWNKLIVNAKERN 1777
>gi|406861529|gb|EKD14583.1| hypothetical protein MBM_07304 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 1997
Score = 322 bits (824), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 243/787 (30%), Positives = 379/787 (48%), Gaps = 101/787 (12%)
Query: 11 EASIFRFCKIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEP 70
E ++ R ILGWD F N+ R++ + Y D+D Y +TF P
Sbjct: 1082 EPNMDRLYLEILGWDIFHDGDSPPSNNE------------CRKIDNKYLDLDLYKSTFGP 1129
Query: 71 LLFEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGF-----HLPSVTYEADEVESISPND 125
LL EV ++ +DE + +++ V+ D F ++P T +V S D
Sbjct: 1130 LLISEVWRSLVTARDENNYKPIEIK-VLNRLSVDKFMEVSTNMPRSTSRDLQV---SERD 1185
Query: 126 LLLLSKEEFKEGSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHS 185
++LLS+ P HC A + R +V+ + + + +
Sbjct: 1186 IVLLSQS--------PDPLNSQGQPHCLARVERTTR--KKDVLEVTYRISRDTKPALLQC 1235
Query: 186 LITSSVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKI 245
L+ + +L+ LKI ++T REY AL S+ IL A
Sbjct: 1236 LVPNG------KLYILKIADMTTTQREYAALSSLEYYDLCSEILEAK------------- 1276
Query: 246 PGLLHEYIKE---------NHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAI 296
P L +Y E N N Q +AI F LIQGPPG+GKT+TI+ ++ ++
Sbjct: 1277 PSPLQKYTDEKVSSVSARYNLNTGQAKAILSANDNDGFTLIQGPPGSGKTKTIVAMVGSL 1336
Query: 297 LHATPARVHSKGGLREIKRGPELPMHEKYNHWGRASPWLVGA--NPRDNIMPIDGDDGFF 354
L T + + ++ P P + + L+ A N + + + +G
Sbjct: 1337 LTQTLQQQAQEQAQQK----PAAPGQKAASTAAPKKKLLICAPSNAAVDELVVRLKEGIL 1392
Query: 355 PTTGNELKPEVVNSSRRYRVRVLVCAPSNSALDEIVLRLL--NTGIRD------ENIRSY 406
P +G+ K +N R R + A + LDE+V + L N+G +D E + +
Sbjct: 1393 PLSGSRQK---INVIRLGRSDAINTAVKDVMLDELVQKKLDGNSGEKDKINADREKLHTD 1449
Query: 407 TPKI------VRIGLKAHHSVNSVAIDHLVEQKRDD---------SAADKQKHGATRK-- 449
+I +R + + N V + + Q+ D S D+ K
Sbjct: 1450 AAQIKEKLNVIRPQMDKARTDNDVIEERKLRQQFDQLKRQQAMIGSKIDEDKQSGNTYAR 1509
Query: 450 ----DRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLA 505
+R + I++ A ++CSTLS SG +L KLN F+ VIIDEAAQ +E + L+PL
Sbjct: 1510 QNEINRQRFQQEIIDGAHVLCSTLSGSGHDMLRKLNVEFETVIIDEAAQCIELSALIPLK 1569
Query: 506 TGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYP--VKMLKTQYRMHPEVR 563
GC + LVGDP QLP TV+S A+ GY SLF R+Q+ +P V +L TQYRMHPE+
Sbjct: 1570 YGCSKCILVGDPEQLPPTVLSRSAQSFGYEQSLFVRMQK-NHPKDVHLLDTQYRMHPEIS 1628
Query: 564 SFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEV 623
SFPS +FY+ L DG D+ + WH GP+ FFD+ G +++ S+INI E+
Sbjct: 1629 SFPSEQFYNSRLIDGPDMAKLRQQPWHASTILGPYRFFDV-AGTQTKQVHGHSFINIPEL 1687
Query: 624 DFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGC 683
+ L L+ +L + Y + ++ II+ Y+ Q+ + + RF T+G E + ++ T D
Sbjct: 1688 NAALQLYSRLKTDYTNVDFKGKIGIITTYKAQLNEMKLRFAHTYGEEIFQEIEFNTTDAF 1747
Query: 684 QGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLV 743
QGRE+++ IFSCVRA IGFL D RRMNVG+TRAKSS+ V+G + +L++ + WN L+
Sbjct: 1748 QGREREIIIFSCVRAKATGGIGFLGDIRRMNVGLTRAKSSLWVLGDSRSLKQGQFWNRLI 1807
Query: 744 KSAEKQD 750
+ A+ +D
Sbjct: 1808 EDAKSRD 1814
>gi|50303681|ref|XP_451783.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49640915|emb|CAH02176.1| KLLA0B05555p [Kluyveromyces lactis]
Length = 1997
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 248/842 (29%), Positives = 405/842 (48%), Gaps = 87/842 (10%)
Query: 17 FCKIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEV 76
F + +L WDY R S+ D + D VKD++ V DY EPLL E
Sbjct: 1109 FYEKVLKWDYKR---TSEYPTDTETSYSD--------VKDSFSSVSDYQKVMEPLLLLEC 1157
Query: 77 KAQIIQKKDEEEVQEWKLRLVMECGEADGFHL-PSVTYEADEVESISPNDLLLLSKEEFK 135
+ +D EE + + + +D + + S+ I+ +DL++L
Sbjct: 1158 WQGLCSARDREEQKSFSFIVGNRTVVSDFYEVYASINKNVVRDTGINDSDLIVLGYFPDS 1217
Query: 136 EGSTFPTTYAFALVEH-CQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSAV 194
S T F H C A + ++ GE + + +S + N+ +L
Sbjct: 1218 SSSKPLTDKEFKRSNHTCLAKIKEIKNS-KGENMDLTFRIHRSHKFSNLLTL-------- 1268
Query: 195 EKRLFSLKICSLSTIAREYLALRSVGSLPFKDL---ILSA--SEKSSGSQDQSWKIPGLL 249
+ +LK+ ++T+ REY +L+ LP+ DL IL A S + S + +I
Sbjct: 1269 RSEIHALKVMQMTTVEREYTSLKG---LPYYDLLKQILKAQPSVPENISSTEVNRIKANF 1325
Query: 250 HEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGG 309
H N SQ AI + + F LIQGPPGTGKT+TIL ++ + + A +SK
Sbjct: 1326 H------LNTSQATAILSTVTTQGFSLIQGPPGTGKTKTILSIVGYFI--SKANTNSKNT 1377
Query: 310 LREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNSS 369
+ P + + +N + + + +G +GN +PE+V
Sbjct: 1378 VTHTIITPTNTTSTEQLLERQKVLICAPSNAAVDELVLRLREGVLDYSGNTFRPEIVRIG 1437
Query: 370 RRYRVRVLVCAPSNSALDEIVLRLLNTG----IRDENIRS------YTPKIVRIGLK--- 416
R V V + L+E V + L ++D + K+++ L
Sbjct: 1438 RSDAVNESV---KDLTLEEKVDKKLGGSDYEMVQDSALNQKFQDALQKRKMLQAKLNKED 1494
Query: 417 ----AHHSVNSVA------------IDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILN 460
+ S N +A I + +QK + ++ K+ ++R ++ IL
Sbjct: 1495 GNPNSSLSSNEIADIQMEIRDLRRLISEMGKQKDEIRESNSLKYRNREQNRRKAQARILA 1554
Query: 461 EAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQL 520
E+ I+CSTLS S +L+ L FD +IIDEA Q E ++++PL G K+ +VGDP QL
Sbjct: 1555 ESDIICSTLSGSAHDVLASLGVKFDTIIIDEACQCTELSSIIPLRYGGKRCIMVGDPNQL 1614
Query: 521 PATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSD 580
P TV+S A + Y SLF R+Q+ P +L QYRMHP + FPS EFY L+DGS
Sbjct: 1615 PPTVLSGAASDMKYNQSLFVRMQKNCSPY-LLDVQYRMHPAISKFPSLEFYKGKLQDGSS 1673
Query: 581 VEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMY-PQ 639
V++ TRDWH+ FGP+ FFDI GK+ Q + S+ N +E + L L++ Y +
Sbjct: 1674 VQEVNTRDWHKKYPFGPYKFFDIVTGKQKQNTKTMSYTNPEETKVAIELVENLLATYESK 1733
Query: 640 LKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRAS 699
++++ IISPYR Q++ + +F+ FG + + +D T+DG QG+EKD+ I SCVRA
Sbjct: 1734 YDFTNRIGIISPYREQMQNMRNQFRRYFGDQIRSYIDFNTIDGFQGQEKDIIIISCVRAD 1793
Query: 700 DKK-SIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRVSKP 758
D S+GFL D+RRMNV +TRAK S+ ++G +L +K W +L+ A++++CL
Sbjct: 1794 DNSTSVGFLKDFRRMNVALTRAKCSLWILGHHKSLVNNKLWKHLISDAKERNCLELACPG 1853
Query: 759 Y---ASFFSDENLESMRKNATTDNVQGADGHVPHDDETMHYANTGDADQGQADDIDNADG 815
+ + ++ + +E R + D + D + P+D + ++ +G +++ DG
Sbjct: 1854 FLNPSDRYAQDTIE--RFKGSHDYIANLDTYNPYD--------SFNSSRGHK-NVNKRDG 1902
Query: 816 DA 817
D+
Sbjct: 1903 DS 1904
>gi|50293955|ref|XP_449389.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528703|emb|CAG62365.1| unnamed protein product [Candida glabrata]
Length = 1979
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 243/834 (29%), Positives = 386/834 (46%), Gaps = 176/834 (21%)
Query: 21 ILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKAQI 80
+L WDY ++ E D D+G R++KD +K +DY +PLL E +
Sbjct: 1080 LLQWDYTKI----SEYPD------DKGADAYRDIKDEFKSANDYKNVMKPLLLLESWQGM 1129
Query: 81 IQKKDEEEVQEWKLRLVMECGEADGFHL-PSVTYEADEVESISPNDLLLLSK-------- 131
+D +E + + + +D + + S++ + + +I+ +DL++L+
Sbjct: 1130 CSARDRDENTPFSIVIGNRTSISDFYEIYASISKKMLQDSNITESDLIVLAYFPNIAPGQ 1189
Query: 132 ----EEFKEGSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLI 187
EEFK+ C A + L+ G V S R+ HS
Sbjct: 1190 KVRYEEFKKAQF-----------TCLAKVKTLKKTKGGNVDM-------SLRVHRNHSFA 1231
Query: 188 TSSVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPG 247
E + ++K+ ++TI REY L ++ + ILSA + S S +I
Sbjct: 1232 KYLTHRAE--INAVKVMQMTTIEREYSTLEALQYYDLVNQILSA-KLSPPSNTFEQQIMK 1288
Query: 248 LLHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSK 307
+ EY N SQ AI ++ F LIQGPPGTGKT+TILG++ L
Sbjct: 1289 VQQEYF---LNESQARAIVNTVISSGFSLIQGPPGTGKTKTILGIVGYFLS--------- 1336
Query: 308 GGLREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIM-PIDGDDGFFPTTGNEL--KPE 364
L A P I P D TT +++ KP
Sbjct: 1337 ---------------------------LRNATPTGTIQAPTDKKS----TTLDQMLKKP- 1364
Query: 365 VVNSSRRYRVRVLVCAPSNSALDEI------------------VLRLLNTGIRDENIRSY 406
++L+CAPSN+A+DEI ++RL T + + ++
Sbjct: 1365 ----------KILICAPSNAAVDEICLRLKSGIKTKGQTVRPAIIRLGRTDVVNAELKDV 1414
Query: 407 TPKIV---RIGLKAHHSVNSVAIDHLVE-------QKRDDSAAD---------------- 440
T + + ++G K++ N+ I+ + Q RD A+
Sbjct: 1415 TLEEIVDKKLGDKSYEFTNNPDIEKKFQSLLSERRQLRDKLNAENGSPDSSMSTNDIANL 1474
Query: 441 ---------------------KQKHGATRKDRD----SIRSAILNEAVIVCSTLSFSGSA 475
++K+ ++RD + ++ +L I+CSTLS S
Sbjct: 1475 QMKIRELTKSINELGREKDEMREKNAINYRNRDLDRRNAQAQVLASCDIICSTLSGSAHD 1534
Query: 476 LLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYG 535
+L+ L F+ V+IDEA Q E + ++PL G K+ +VGDP QLP TV+S A + Y
Sbjct: 1535 VLATLGMKFETVVIDEACQCTELSAIIPLRYGSKRCIMVGDPNQLPPTVLSGAASNFKYN 1594
Query: 536 TSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCF 595
SLF R+++ P +L QYRMHP + FPS EFYD L DG D+E R WHE F
Sbjct: 1595 QSLFVRMEKNSKPF-LLDVQYRMHPAISKFPSAEFYDGRLMDGPDMESLNKRIWHEQEPF 1653
Query: 596 GPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMY-PQLKSSSQLAIISPYRH 654
P+ FFDI G++ Q + S+ N +E++ + + KL +Y ++ S+++ +ISPY+
Sbjct: 1654 KPYKFFDITSGQQVQNVKTMSYTNKEEIEVAIEMVDKLFRLYDNKIDFSNKIGVISPYKE 1713
Query: 655 QVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKS-IGFLADYRRM 713
Q+++ + F FG K VD T+DG QG+EK++ I SCVRA D +S +GFL D+RRM
Sbjct: 1714 QIQRMRREFMRYFGGSITKFVDFNTIDGFQGQEKEIIIISCVRADDSQSGVGFLKDFRRM 1773
Query: 714 NVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRVSKPYASFFSDEN 767
NV +TRA++SI ++G +LR+ K W++L+ AE + CL + Y+ F + N
Sbjct: 1774 NVALTRARTSIWILGHQKSLRKSKLWSHLIDDAEGRGCL---QQAYSGFLNSSN 1824
>gi|171684931|ref|XP_001907407.1| hypothetical protein [Podospora anserina S mat+]
gi|170942426|emb|CAP68078.1| unnamed protein product [Podospora anserina S mat+]
Length = 2074
Score = 319 bits (817), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 244/812 (30%), Positives = 378/812 (46%), Gaps = 177/812 (21%)
Query: 21 ILGWDYFRLVKESQERNDKNSKKVDRGKLGLR--EVKDTYKDVDDYLATFEPLLFEEVKA 78
IL WD F E ND + G R EV +TY D Y TF PLL E
Sbjct: 1140 ILEWDIF------HEGNDPPN--------GYRCAEVSNTYNDPVSYKQTFFPLLINEAWR 1185
Query: 79 QIIQKKDEEEVQEWKLRLVMECGEADGFH--LPSVTYEADEVESISPNDLLLLSK----- 131
+ KDE +++ ++++ D F SV + +S D++L+S+
Sbjct: 1186 SFVTAKDETTSKQFGIKVLSRMA-VDKFVEVTASVPAAVSKDRGLSEGDIVLMSRGEDPL 1244
Query: 132 ---EEFKEGS-TFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLI 187
EE S + TTY +VE + R+ G IH +L+
Sbjct: 1245 NQPEELHCLSRIWKTTYKKDIVE------VVYRLNGRGNPIH--------------QALV 1284
Query: 188 TSSVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPG 247
S +V +KI +++TI REY AL S+ D +L A E S I G
Sbjct: 1285 PGSEFSV------VKITNMTTIEREYAALESLQYYDLMDEVLKA-EPSPMLNFGDQAIKG 1337
Query: 248 LLHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSK 307
++ Y N Q +AI F L+QGPPGTGKT+TI+ ++ +L +
Sbjct: 1338 VMDNY---QLNLGQAKAILNAKENDGFTLVQGPPGTGKTKTIVAMVGCLLSNS------- 1387
Query: 308 GGLREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVN 367
L G+N +I P G KP
Sbjct: 1388 ---------------------------LKGSNGAVSI----------PRPGLTAKPTTAP 1410
Query: 368 SSRRYRVRVLVCAPSNSALDEIVLRL------------------------LNTGIRD--- 400
+ + +LVCAPSN+A+DE+VLRL +N G++D
Sbjct: 1411 ARK-----LLVCAPSNAAVDELVLRLKQGVKTMNGTHHKIEVLRLGRTDAINAGVKDVTL 1465
Query: 401 -ENIRSYTPKIV-------------------------RIGLKAHHSVNSVAIDHLVEQKR 434
E +++ ++ R L A + + + + ++++
Sbjct: 1466 DEQVKARMEAVINSSGPSDREQMHKEAGEIKVKLSELRPQLDAAQAADDHQLMNKLKREY 1525
Query: 435 DDSA-----------ADKQKHGATRKD----RDSIRSAILNEAVIVCSTLSFSGSALLSK 479
DD ADK +++ R ++ IL++A ++C+TLS SG +
Sbjct: 1526 DDLMKRRAHIGARIEADKSSGNTFQREVEIKRRQVQQEILDKAQVLCATLSGSGHEMFKN 1585
Query: 480 LNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLF 539
LN F+ VIIDEAAQ VE + L+PL GC + LVGDP QLP TV+S A GY SLF
Sbjct: 1586 LNVEFETVIIDEAAQCVELSALIPLKYGCSKCILVGDPKQLPPTVLSQSAARYGYDQSLF 1645
Query: 540 KRLQRA-GYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPF 598
R+Q+ V +L QYRMHPE+ FPS+EFY+ L+DG+D+ + WH+ GP+
Sbjct: 1646 VRMQKNHAKDVHLLDMQYRMHPEISRFPSKEFYEGLLQDGADMAGLRLQPWHQSVYLGPY 1705
Query: 599 SFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQ 658
FFD+ +G +S+ + S +N +E+ + L+ + S Y + + ++ II+PY+ Q+ +
Sbjct: 1706 RFFDV-KGSQSRGPKNQSLVNEEELKVAMKLYQRFRSDYSNVDARGKIGIITPYKAQLHR 1764
Query: 659 FQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGIT 718
++RF + +G + ++ T D QGRE ++ IFSCVRAS IGF+ D RRMNVG+T
Sbjct: 1765 LRQRFTDKYGEGITEEIEFNTTDAFQGRECEIIIFSCVRASPTGGIGFMTDIRRMNVGLT 1824
Query: 719 RAKSSILVVGCASTLREDKHWNNLVKSAEKQD 750
RAKSS+ ++G + L++ ++WN L++ A+++D
Sbjct: 1825 RAKSSLWILGDSRALQQGEYWNKLIEDAKERD 1856
>gi|149241697|ref|XP_001526342.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146450465|gb|EDK44721.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 2053
Score = 318 bits (815), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 239/805 (29%), Positives = 371/805 (46%), Gaps = 181/805 (22%)
Query: 53 EVKDTYKDVDDYLATFEPLLFEEVKAQIIQKKDEEEVQEWKLRLVMECGEA-DGFH--LP 109
+VK++Y V DY+ EPLL E I KD ++E LV+ + DGF
Sbjct: 1155 KVKNSYDKVKDYVKAMEPLLMLECWQAIQSAKDT--IKETPFELVVGSRTSIDGFFDVFT 1212
Query: 110 SVTYEADEVESISPNDLLLL-------------SKEEFKEGSTFPTTYAFALVEHCQANL 156
S++ + E + +DL++L + K +T L++ L
Sbjct: 1213 SMSKKTIEDRKLIASDLIVLGCTNDATILRPEEQRNYLKAPNTLTCLAKVTLIKSAGPEL 1272
Query: 157 --LRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSAVEKRLFSLKICSLSTIAREYL 214
+ +R+Y +G +I +T S + +K+ + T+ RE+
Sbjct: 1273 ADVTVRVYPSGPLI----------------GALTPKTSII-----GMKVMQMVTVEREFS 1311
Query: 215 ALRSVGSLPFKDLILSAS-----EKSSGSQDQSWKIPGLLHEYIKENHNASQLEAIHEGL 269
+LR + D I++A E + +Q +KI + N SQ AI
Sbjct: 1312 SLRGLEYYDLSDAIIAAKPNPPIEVNDAEIEQMYKIYDV---------NKSQARAIKGTY 1362
Query: 270 LRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLREIKRGPELPMHEKYNHWG 329
F LIQGPPGTGKT+TILG++ L H +
Sbjct: 1363 ESDGFFLIQGPPGTGKTKTILGIVGYALS------HKES--------------------- 1395
Query: 330 RASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNSSRRYRVRVLVCAPSNSALDEI 389
D I+ + P+ G ++L+CAPSN+A+DE+
Sbjct: 1396 ------------DKIIELPQKPAAKPSKGG---------------KILICAPSNAAVDEL 1428
Query: 390 VLRL------------------------LNTGIRDENIRSYTPK----------IVRIGL 415
VLRL +N +RD + K I+ G+
Sbjct: 1429 VLRLRNGVKNSKGEHMDLKVVRLGRSDAINAAVRDLTLEELVDKELQSKQQEDVIIDPGI 1488
Query: 416 KAHH-----------------SVNSVAIDHL------VEQKRDDSAA--DKQKHGAT--- 447
+A H S++S ID L V ++R D A D+Q+ A+
Sbjct: 1489 RAEHTKKVKERDQIKTRLSTESLSSKEIDKLETRLREVNKERSDLAKKLDEQRERASIAY 1548
Query: 448 ---RKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPL 504
R +I++ IL++A ++C+TLS S L+S L+ FD VIIDEA Q +E + ++PL
Sbjct: 1549 RSREIGRRTIQTKILDDAQVLCATLSGSAHELISSLSVKFDQVIIDEACQCLELSAIIPL 1608
Query: 505 ATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYP--VKMLKTQYRMHPEV 562
GC++ +VGDP QLP TV+S A Y SLF R+Q YP V +L QYRMHP++
Sbjct: 1609 RYGCRKCIMVGDPNQLPPTVLSQAASSFNYEQSLFVRMQ-TNYPDSVYLLNVQYRMHPQI 1667
Query: 563 RSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDE 622
FPS EFY L+DG ++E+ R WH + P+ FFDI + ++ + S N++E
Sbjct: 1668 SQFPSAEFYQSKLKDGPNMEEKNKRPWHSIKPLSPYRFFDI-ASRHTKNELTRSLFNLEE 1726
Query: 623 VDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDG 682
L L KLI++ PQ + ++ IISPY+ Q++ ++ F +G +D TVDG
Sbjct: 1727 ARICLQLVQKLITLIPQQAFAGKVGIISPYKEQIRTIKDVFVREYGKIILNEIDFNTVDG 1786
Query: 683 CQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNL 742
QG+EK++ I SCVRAS ++GFL+D RRMNV +TRA++++ ++G +L +K WN L
Sbjct: 1787 FQGQEKEIIIMSCVRASADGNVGFLSDVRRMNVALTRARTTLWILGNRESLLRNKVWNRL 1846
Query: 743 VKSAEKQDCLFRVSKPYASFFSDEN 767
+K AE+++ V+ F S +N
Sbjct: 1847 LKDAEQRNA---VTNASPGFLSSKN 1868
>gi|448105212|ref|XP_004200439.1| Piso0_003026 [Millerozyma farinosa CBS 7064]
gi|448108344|ref|XP_004201070.1| Piso0_003026 [Millerozyma farinosa CBS 7064]
gi|359381861|emb|CCE80698.1| Piso0_003026 [Millerozyma farinosa CBS 7064]
gi|359382626|emb|CCE79933.1| Piso0_003026 [Millerozyma farinosa CBS 7064]
Length = 1934
Score = 318 bits (815), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 245/807 (30%), Positives = 375/807 (46%), Gaps = 154/807 (19%)
Query: 54 VKDTYKDVDDYLATFEPLLFEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTY 113
+KD Y DV +Y EPLL E I K + + L L+ DGF +
Sbjct: 1099 IKDAYSDVKEYTKITEPLLMLECWQGIQSSKQTSQDLAFDL-LIGSRTSCDGFFDVYASM 1157
Query: 114 EADEV--ESISPNDLLLLSKEEFKEGSTFPTTYAFALVEHCQANLLRLRMYLAG--EVIH 169
+ V ++ +DLL+L E K+ S + L L ++R + E
Sbjct: 1158 KKSTVSDRKLTDSDLLVLGSLEGKQFSDDKRKAEYILSNETLTCLAKVREIKSANSEYCD 1217
Query: 170 INKDAVKSQRLLNIHSLITSSVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLI- 228
I S ++ I + + + LK+ ++TI REY +L+ LP+ DL
Sbjct: 1218 ITIRVYPSGPMMGILT--------PKNMVIGLKVMQMTTIEREYSSLKG---LPYYDLCE 1266
Query: 229 -LSASEKSSGSQDQSWKIPGLLHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQ 287
+ S+ ++ Q + +L ++ N N SQ AI + F LIQGPPGTGKT+
Sbjct: 1267 NILESKPNAPLQITDEEAKFMLEKF---NVNRSQASAILGTYKQDGFSLIQGPPGTGKTK 1323
Query: 288 TILGLLSAILHATPARVHSKGGLREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPI 347
TILG++ L A ++N + +
Sbjct: 1324 TILGIVGYAL----------------------------------------AKSQNNSISV 1343
Query: 348 DGDDGFFPTTGNELKPEVVNSSRRYRVRVLVCAPSNSALDEIVLRL-------------- 393
PT +V NS ++L+CAPSN+A+DE+VLRL
Sbjct: 1344 -------PTNTQGSNKQVNNS------KLLICAPSNAAVDELVLRLRQGVKSSSGESMNL 1390
Query: 394 ----------LNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHL-------------- 429
+N+ +RD + K ++ S ++ +H
Sbjct: 1391 SVVRLGRSDAINSSVRDLTLEELVDKQLQSQATNTMSDPTIRTEHTKCVSERNRLRELLQ 1450
Query: 430 ------------------VEQKRDDSAA--DKQKHGA-----TRK-DRDSIRSAILNEAV 463
V +KR++ A D+Q+ TR+ +R ++S IL+EA
Sbjct: 1451 QPNLTEEEVTKYEDELRAVNRKRNELAKRLDEQRERVSIAFRTREIERRQLQSKILSEAN 1510
Query: 464 IVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPAT 523
++CSTLS S L+ +N FD VIIDEA Q VE + L+PL GCK+ +VGDP QLP T
Sbjct: 1511 VICSTLSGSAHDFLASMNMVFDQVIIDEACQCVELSALIPLRYGCKKCIMVGDPNQLPPT 1570
Query: 524 VISPVAEHLGYGTSLFKRLQRAGYP--VKMLKTQYRMHPEVRSFPSREFYDEALEDGSDV 581
V+S VA Y SLF R+Q+ YP V +L QYRMHP++ FPS EFY+ L DG +
Sbjct: 1571 VLSQVASSFNYEQSLFVRMQKK-YPSHVYLLDIQYRMHPDISRFPSAEFYNSRLHDGEGM 1629
Query: 582 EDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLK 641
++ R+WH P+ FF+I GK Q + S N E L + L+ + PQ +
Sbjct: 1630 KELNQREWHSDFPLSPYRFFNI-TGKHKQSEYTRSLYNYSEAQVALEMVKTLMKILPQNE 1688
Query: 642 SSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDK 701
S ++ IISPY+ Q++ ++ F++ +G +D TVDG QG+EK++ I SCVRASD
Sbjct: 1689 FSGRIGIISPYKEQIRVLKDVFRKNYGQTILNEIDFNTVDGFQGQEKEIIIMSCVRASDS 1748
Query: 702 KSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRVSKPYAS 761
++GFL+D RRMNV +TRA++++ ++G +L +K WN+L++ A+++D V+ Y
Sbjct: 1749 GNVGFLSDVRRMNVALTRARTTLWILGNKESLSRNKTWNHLLEDAKERDA---VTDAYPG 1805
Query: 762 F---------FSDENLESMRKNATTDN 779
F ++ N E RK DN
Sbjct: 1806 FLARVYKNANYAANNSELKRKQTERDN 1832
>gi|363754976|ref|XP_003647703.1| hypothetical protein Ecym_7029 [Eremothecium cymbalariae DBVPG#7215]
gi|356891739|gb|AET40886.1| hypothetical protein Ecym_7029 [Eremothecium cymbalariae DBVPG#7215]
Length = 2019
Score = 318 bits (814), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 236/810 (29%), Positives = 374/810 (46%), Gaps = 146/810 (18%)
Query: 17 FCKIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEV 76
F +L W+Y R+ D NS++ +++D ++ Y EPLL E
Sbjct: 1091 FYDKVLRWNYTRI----SAYPDDNSEQ------EYTDIEDQFRSSKHYQKVMEPLLLLEC 1140
Query: 77 KAQIIQKKDEEEVQEWKLRLVMECGEADGFHL-PSVTYEADEVESISPNDLLLLSKEEFK 135
+ +D E + + + +D + + S+ + + I+ D+++L
Sbjct: 1141 WQGLCAVRDREIHKAFSFIVGNRTVVSDFYEVYASINKKVVQQAEINEADMIVLGHFPDS 1200
Query: 136 EGSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSAVE 195
T F ++ +R GE + + +S R N +L T
Sbjct: 1201 NHQKTLTNDHFKKSQNTCLAKIRSIKNAKGENMDLTLRIHRSHRFSNFLTLRT------- 1253
Query: 196 KRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIKE 255
++++K ++T+ REY +L+ LP+ DL+ S + +++Q + + I
Sbjct: 1254 -EIYAVKAMQMTTVEREYTSLQG---LPYYDLV-SQIITAKPTEEQHAEDAEVEKVKINY 1308
Query: 256 NHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLREIKR 315
N SQ A+ + F LIQGPPGTGKT+TILG++ L
Sbjct: 1309 KLNTSQATAVVSTVKNLGFSLIQGPPGTGKTKTILGIVGYFLSTI--------------- 1353
Query: 316 GPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNSSRRYRVR 375
R SP V NP GN +++ + +
Sbjct: 1354 --------------RVSPSNVIKNPTQ--------------VGNISTEQLLQ-----KQK 1380
Query: 376 VLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLK--AHHSVNSVAIDHLVEQK 433
VL+CAPSN+A+DE+VLRL G+ + + + PK+VR+G + ++ + ++ LV+++
Sbjct: 1381 VLICAPSNAAVDELVLRL-REGLTNFEGKHFKPKLVRVGRSDAVNAAIKDLTLEELVDKR 1439
Query: 434 --------RDDSAADKQKHGATR------------------------------------- 448
D A D+ H A
Sbjct: 1440 AITQSLEMTHDPALDQNFHNAVDERRKLRDTINKEDGSPTSVLSTDQISKIQLKLRELSK 1499
Query: 449 ------KDRDSIR------------------SAILNEAVIVCSTLSFSGSALLSKLNHGF 484
K RD +R + IL E+ I+CSTLS S +L+ L F
Sbjct: 1500 TINELGKQRDELRERNSVIYRNRELNKRKAQARILAESDIICSTLSGSAHDVLASLGVKF 1559
Query: 485 DVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQR 544
D VIIDEA Q E ++++PL G K+ +VGDP QLP TV+S A Y SLF R++
Sbjct: 1560 DTVIIDEACQCTELSSIIPLRYGGKRCIMVGDPNQLPPTVLSGAASTYKYNQSLFVRMEN 1619
Query: 545 AGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIH 604
P +L QYRMH + SFPS EFYD L+DG D+++ R WHE + F P+ FFDI
Sbjct: 1620 NCKP-HLLDVQYRMHSMISSFPSLEFYDGKLKDGPDMDNINQRQWHETQPFAPYKFFDIL 1678
Query: 605 EGKESQPAGSGSWINIDEVDFVLLLFHKLISMY-PQLKSSSQLAIISPYRHQVKQFQERF 663
GK+ Q A + S++N DE + + KL+ +Y ++ + ++ IISPYR Q++ ++ F
Sbjct: 1679 TGKQQQNAKTMSYVNYDECQVSIEMVDKLLRLYEKKVDFTGKIGIISPYREQMQMMKKAF 1738
Query: 664 KETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASD-KKSIGFLADYRRMNVGITRAKS 722
+ FG +D T+DG QG+EK++ I SCVRA D K ++GFL D+RRMNV +TRAK+
Sbjct: 1739 RSYFGGTIFTYIDFNTIDGFQGQEKEIIIISCVRADDSKNNVGFLKDFRRMNVALTRAKT 1798
Query: 723 SILVVGCASTLREDKHWNNLVKSAEKQDCL 752
S+ ++G +L +K W NL+ A+ + CL
Sbjct: 1799 SLWILGHHKSLCRNKLWMNLISDAKTRGCL 1828
>gi|213408549|ref|XP_002175045.1| helicase sen1 [Schizosaccharomyces japonicus yFS275]
gi|212003092|gb|EEB08752.1| helicase sen1 [Schizosaccharomyces japonicus yFS275]
Length = 1974
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 241/751 (32%), Positives = 370/751 (49%), Gaps = 84/751 (11%)
Query: 52 REVKDTYKDVDDYLATFEPLLFEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGFHLPSV 111
+ + TY V++Y+ TFEPLLF E+ AQ+++ K + +++L+ L V
Sbjct: 1088 KRISATYTSVENYINTFEPLLFHELWAQMVRSKVDNNSPPVEVQLLSRSTVDAFIDLFVV 1147
Query: 112 TYEADEVESISPNDLLLLSKEEFKEGSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHIN 171
++ I +D+ +SK + + P+ A + Q+ I
Sbjct: 1148 APDSTLGLGIGDSDVCAMSKSK---NPSHPSAGEPAFLVKVQS---------------IT 1189
Query: 172 KDAVKSQRLLNIHSLITSSVSAVEKRLFSL---KICSLSTIAREYLALRSVGSLPFKDLI 228
K KS + + +L T S + + S K+ S++T REY +LR+ L F D+
Sbjct: 1190 KK--KSGLEVTLRTLPTVSAMQLFRPNLSFYVQKLFSITTNLREYSSLRA---LSFYDVS 1244
Query: 229 LSASEKSSGSQDQSWKIPGLLHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQT 288
+ D S + P L + N Q AIH R F L+QGPPGTGKT+T
Sbjct: 1245 EDIIKARCNPCDLSLQPPQLKRVMESYHVNEPQALAIHAACARTGFTLVQGPPGTGKTKT 1304
Query: 289 ILGLLSAILHATPARVHSKGGLREIKRGPELPMHEKYNHWGRASPWLVG-ANPRDNIMPI 347
ILG++SA+L + GG R + P G + +N + + +
Sbjct: 1305 ILGIVSALL--------TSGGQ---GRRFDAPGQNGNTQPGTKKVLICAPSNAAIDEILL 1353
Query: 348 DGDDGFFPTTGNELKPEVVNSSRRYRVRVLVCAPSNSALDEIV---LRLLNTGIRDEN-- 402
DG F G + KP+++ + V LDE + +++LN +N
Sbjct: 1354 RLKDGIFDHEGIKFKPKILRVGYSESINPHV---KEFTLDEKMQEQMQVLNLKKNQDNGE 1410
Query: 403 ---IRSYTPKIV--RIGLKA------HHSVNSVAID----------HLVEQKRDDSAADK 441
+R +I+ R L+A + +N A++ + +EQ+ DD +
Sbjct: 1411 SMQVRKRHDEILKERDALRAQLEKARNSGINDPAVEMKLREVMKTKNQLEQRLDDM---R 1467
Query: 442 QKHGATRKDRD----SIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVE 497
++ G ++ D I+S +L +A I+CSTLS SG +L K F VIIDEAAQAVE
Sbjct: 1468 RQQGIANRNMDIAKKQIQSQLLKDAEIICSTLSASGHDILLKSGISFPSVIIDEAAQAVE 1527
Query: 498 PATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVK-MLKTQY 556
+ L+PL GC++ +VGDP QLP TV+S A GY SL+ R+ + +L QY
Sbjct: 1528 LSALIPLKYGCERCIMVGDPNQLPPTVLSKTASQNGYSESLYVRMHKQNPNSSFLLSIQY 1587
Query: 557 RMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGS 616
RMHPE+ FPS FY L DG D++ T R WH FG + FFD+ + S + + S
Sbjct: 1588 RMHPEISRFPSSYFYGSRLLDGPDMQKLTARPWHHDPTFGIYRFFDVRTRESS--SITKS 1645
Query: 617 WINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVD 676
N +E FVL L+ KL+ Y + ++ I++PYR Q+++ + +F+ +G K VD
Sbjct: 1646 VYNPEEASFVLTLYDKLVQDYINVDMEGKVGIVTPYRRQLQELRMQFERRYGPLIFKRVD 1705
Query: 677 ITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLRED 736
TVDG QG+EKD+ +FSCVR IGFL+D RR+NV +TRAKSS+ ++G TL +D
Sbjct: 1706 FNTVDGFQGQEKDIILFSCVRGDMGGGIGFLSDTRRLNVALTRAKSSLYIIGNVGTLTKD 1765
Query: 737 KHWNNLVKSAEKQDCL-------FRVSKPYA 760
K W+ L+ A+ + CL R S+ YA
Sbjct: 1766 KMWSALITDAQTRSCLVTSSIDQLRRSQSYA 1796
>gi|448521196|ref|XP_003868449.1| Sen1 helicase [Candida orthopsilosis Co 90-125]
gi|380352789|emb|CCG25545.1| Sen1 helicase [Candida orthopsilosis]
Length = 1946
Score = 316 bits (809), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 247/783 (31%), Positives = 387/783 (49%), Gaps = 91/783 (11%)
Query: 21 ILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKAQI 80
IL W Y RND S K +VK+TYKDV++Y++ EPL E QI
Sbjct: 1057 ILQWSY-------NLRNDYPSG----DKSAYTKVKNTYKDVNEYVSVMEPLFMLECWQQI 1105
Query: 81 IQKKDEEEVQEWKLRLVMECGEADGFH--LPSVTYEADEVESISPNDLLLLSKEEFKEGS 138
+D +++ LV DGF+ S++ + E ++ +DLL+++ + E
Sbjct: 1106 QSARDTVVEDPFQI-LVGTRTSVDGFYDVFTSMSKKTIENRKLTESDLLVIACDN--ESI 1162
Query: 139 TFPT---TYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSAVE 195
P Y + C +R Y+ E + K+ L+ A +
Sbjct: 1163 IQPKERRNYIKSPNTACCLAKIREIKYVNPEYSDVTLRIAKTSPLV--------GTLAPK 1214
Query: 196 KRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIKE 255
+ +++ + T+ RE+ +LR + D I+SA+ D + H +
Sbjct: 1215 ATIIGMRVMQMVTVEREFSSLRGLQYYDLVDSIISATPTVPKQVDDK----DVEHMHKLY 1270
Query: 256 NHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLS-AILHATPARVHSKGGLREIK 314
+ N SQ +AI + F LIQGPPGTGKT+TILG++ ++ H T +V
Sbjct: 1271 DVNMSQAKAIIGSYQSEGFSLIQGPPGTGKTKTILGIVGYSLSHGTNEKV---------- 1320
Query: 315 RGPELPMHEKYNHWGRASPWLVGA--NPRDNIMPIDGDDGFFPTTGNELKPEVVNSSRRY 372
+ M K + + L+ A N + + + +G + G + +VV R
Sbjct: 1321 ----IEMPSKSSSPPSKAKILICAPSNAAVDELVVRLRNGVKNSKGEHMPLKVV---RLG 1373
Query: 373 RVRVLVCAPSNSALDEIVLRLLNTG----IRDENIRSYTPKIVRIGLKAHHSVNSVAIDH 428
R + A + L+E+V + L T + D N+RS K+ + + +N +D
Sbjct: 1374 RSDAINPAVKDLTLEELVDKELQTKQVEVVTDPNLRSELNKMTQERDRLRSRLNDETLDP 1433
Query: 429 L----VEQKRDDSAADKQKHGATRK-----------------DRDSIRSAILNEAVIVCS 467
V+QK + +KQ+ T+K DR +I++ IL+EA I+C+
Sbjct: 1434 KEKDGVQQKLLE--INKQRSELTKKLDDQRERSSIAYRNKEIDRRNIQARILSEANILCA 1491
Query: 468 TLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISP 527
TLS S L++ L+ FD VIIDEA Q +E A ++PL GCK+ +VGDP QLP TV+S
Sbjct: 1492 TLSGSAHDLVANLSVTFDQVIIDEACQCLESAAIIPLRYGCKKCIMVGDPNQLPPTVLSQ 1551
Query: 528 VAEHLGYGTSLFKRLQRAGYP--VKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYT 585
A L Y SLF R+Q+ YP V +L TQYRMHP + FPS EFY L DG +++
Sbjct: 1552 SAASLNYDQSLFVRMQQ-NYPDSVYLLNTQYRMHPMISKFPSAEFYQSKLIDGPGMKEKN 1610
Query: 586 TRDWHEYRCFGPFSFFDI---HEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKS 642
TR WH P+ FFDI HE E + S N +E + L L K+++M PQ
Sbjct: 1611 TRPWHLIDPLSPYRFFDIVSRHEKNEL----TRSLFNKEEANVCLQLVQKMMTMVPQSDI 1666
Query: 643 SSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKK 702
+ ++ IISPY+ Q++ + F+ +G +D TVDG QG+EK++ I SCVRAS
Sbjct: 1667 AGKIGIISPYKEQIRTIKSVFERAYGRLIFNEIDFNTVDGFQGQEKEIIIMSCVRASANG 1726
Query: 703 SIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRVSKPYASF 762
++GFL+D RRMNV +TRA +++ ++G ++L D W L++ AEK++ V+K ++ F
Sbjct: 1727 NVGFLSDVRRMNVALTRACTTLWILGNKTSLERDAVWKRLLEDAEKRNT---VTKAHSGF 1783
Query: 763 FSD 765
++
Sbjct: 1784 LTN 1786
>gi|440634637|gb|ELR04556.1| hypothetical protein GMDG_06846 [Geomyces destructans 20631-21]
Length = 1897
Score = 315 bits (808), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 237/780 (30%), Positives = 363/780 (46%), Gaps = 158/780 (20%)
Query: 50 GLREVKDTYKDVDDYLATFEPLLFEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGFHLP 109
G + +TY+ D Y F PLL E + +DE Q + + +V + +
Sbjct: 1136 GCVRIANTYQTPDSYRGVFYPLLIAEAWRSLKTDRDETNSQAFDIAVVTRMSVDRFYEVS 1195
Query: 110 SVTYEADEVES-ISPNDLLLLS--KEEFKEGSTFPTTYAFALVEHCQANLLRLRMYLAGE 166
+ AD E+ I D++LLS KE K HC A + R
Sbjct: 1196 TTMTMADHREAKIREGDIVLLSRAKEPLKNRE----------APHCLARVYR-------- 1237
Query: 167 VIHINKDAVKSQRLLNIHSLITSSVSAV--EKRLFSLKICSLSTIAREYLALRSVGSLPF 224
+ +D V+ LN ++ A+ ++ +KI S+++I REY AL+S+
Sbjct: 1238 -TNRKRDMVEVSYRLNGMAVNKPGGLALAPNTQIRGVKITSITSIEREYAALKSMEYYDL 1296
Query: 225 KDLILSASEKSSGSQDQSWKIPGLLHEYIKENH--NASQLEAIHEGLLRKAFVLIQGPPG 282
+ IL A + S P ++ N+ N +Q +AI AF LIQGPPG
Sbjct: 1297 CNEILQAEPSPLLNYPDSALAP------VQRNYDVNRAQAKAIWSATENDAFTLIQGPPG 1350
Query: 283 TGKTQTILGLLSAILHATPARVHSKGGLREIKRGPELPMHEKYNHWGRASPWLVGANPRD 342
+GKT+TI+ ++ AIL T + GP + + R
Sbjct: 1351 SGKTKTIVAMVGAILSPT------------LGIGPGVSI------------------ARP 1380
Query: 343 NIMPIDGDDGFFPTTGNELKPEVVNSSRRYRVRVLVCAPSNSALDEI------------- 389
MP D F ++LVCAPSN+A+DE+
Sbjct: 1381 TGMPDPKKDTFAK-------------------KLLVCAPSNAAVDELVSRLKEGVTDLKG 1421
Query: 390 ------VLRL-----LNTGIRDENIRSYT-----------PKIVRIGLKAHHSVNSV--- 424
VLRL +N+ ++D + + T +V K H +
Sbjct: 1422 NRHKINVLRLGRSDAINSNVKDVTLEALTDARIEKDNANGSAVVPERQKLHQEARRIKEE 1481
Query: 425 -----------------AIDHLVEQKRDDSAADKQKHGA---------------TRKDRD 452
++ ++++ D D+ + GA +R
Sbjct: 1482 LAALRSKQEEARTKGEKTVELRLQREIDGKKRDQTRIGAKIDEDKDNGNTVARDNEINRR 1541
Query: 453 SIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVF 512
I+ ILN A ++C+TLS SG + KL+ F+ VIIDEAAQ++E + L+PL C +
Sbjct: 1542 RIQQEILNGAHVLCATLSGSGHEMFKKLSVEFETVIIDEAAQSIEMSALIPLKYNCTKCI 1601
Query: 513 LVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYP--VKMLKTQYRMHPEVRSFPSREF 570
LVGDP QLP TV+S VA GY SLF+R+Q+ +P + +L TQYRMHPE+ SFP EF
Sbjct: 1602 LVGDPKQLPPTVLSTVAAEFGYDQSLFERMQK-NHPDRIHLLDTQYRMHPEISSFPRGEF 1660
Query: 571 YDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
YD L DG+ +E + WH GP+ FFD+ +G S+ +G S +N DE+ L L+
Sbjct: 1661 YDGELVDGAGLEKLRQKPWHASALLGPYRFFDL-KGTSSR-SGGHSMVNYDEIKVALQLY 1718
Query: 631 HKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDV 690
+L + YP ++ II+PY+ Q+++ + + +G + +D T D QGRE +V
Sbjct: 1719 KRLKTDYPFFDIKGKVGIITPYKGQLREIRFALQREYGDDILDDIDTNTTDAFQGREAEV 1778
Query: 691 AIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQD 750
IFSCVR +GFL D RRMNVG+TRAKSS+ V+G +STL+ D+ W+N+++ A+++D
Sbjct: 1779 IIFSCVRTMG--GVGFLKDVRRMNVGLTRAKSSLWVIGDSSTLQRDRVWSNMIQDAKRRD 1836
>gi|145539554|ref|XP_001455467.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124423275|emb|CAK88070.1| unnamed protein product [Paramecium tetraurelia]
Length = 762
Score = 315 bits (806), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 235/763 (30%), Positives = 396/763 (51%), Gaps = 66/763 (8%)
Query: 16 RFCKIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEE 75
+F IL D+ ++++ S+ + K L ++ ++ D +Y ++PL +EE
Sbjct: 5 KFQHFILELDFNKILESSKLNQLEVPKDEQIESDYLCKIPISFGDESEYQKIWKPLFYEE 64
Query: 76 VKAQIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYE-ADEVESISPNDLLLLSKEEF 134
VKA I++ E + + + + + D F + ++ + + ++ DL+L+S +
Sbjct: 65 VKANIVKSFQTETYPDVEYKF--DKHKKDEF--TKLDFQLIGQKDQLNFRDLILISCSPY 120
Query: 135 KEGSTFPTTYAFALVEHCQANLLRLRMYLAGEVIH--INKDAVKSQRLLNIHSLITSSVS 192
K+G L+E+ Q +++R+ + E I K+ + +Q+ N SL
Sbjct: 121 KQGDQC----LLGLIENNQ-DIIRVNVQNNFEPIAALFEKNMIINQQNPNQKSL------ 169
Query: 193 AVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEY 252
K F K+ LST+ RE+ AL G L K ++LS ++ + + IP L +
Sbjct: 170 ---KNFFIRKVTGLSTLEREFRALHKFGELMLKSILLSL--EAQPKVNSYFTIPYKLDQK 224
Query: 253 IKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLRE 312
+ +N+SQ EAI + L LIQGPPGTGKT+T+LG LS +L + R
Sbjct: 225 LHSIYNSSQYEAIQQTLKTHGITLIQGPPGTGKTKTVLGTLSVLLQSKQERPE-----LN 279
Query: 313 IKRGPELPMHEKYNHWGRASPW--LVGANPRDNIMP-IDGD-DGFFPTTGNEL---KPEV 365
+ + L + +++N PW L + RD+I ++ D +F ++ KP+
Sbjct: 280 LVQKTSLEIEQEFNQ-EYPQPWKSLDYDDWRDHIFDDVEQDISNYFTNRLSDFQKEKPQP 338
Query: 366 VNSSRRYRVRV----LVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSV 421
+ S + ++ LVC PSN+++DEI+ ++L G+ D+ + IVRIG ++
Sbjct: 339 IYKSDYSQAKIPNKILVCGPSNASVDEIIRKVLEEGLLDDTGQRADVPIVRIGENFDPTL 398
Query: 422 NSVAIDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLN 481
+ V+++ LV+Q+ + +D D ++ ILN+A ++ TLS SGS +L+
Sbjct: 399 SKVSLECLVQQRV---------YEQQNQDTDKVKKEILNQAKVIFGTLSSSGSNVLALSE 449
Query: 482 HGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKR 541
FD VIIDEAAQAVE +TL+PL GC+++ L+GDP QLPAT+ S + Y SLF+R
Sbjct: 450 LKFDTVIIDEAAQAVEISTLIPLQYGCRRLILIGDPNQLPATIFSSICGKYKYDQSLFER 509
Query: 542 LQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYT-TRDWHEYRCFGPFSF 600
LQ+ G V +LKTQYRMH ++ F S FY L D +E T +++Y + P
Sbjct: 510 LQKQGANVHLLKTQYRMHAKISKFISTTFYGSELNDYEYLERLIGTPKFYDYYTYSPVVV 569
Query: 601 FDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQ 660
+ +G E+ S+ N E V L+ + + +P + + L I+SPY QV
Sbjct: 570 LHV-KGYEN--FTRNSYCNEMEAKVVTELYKDMKNKFPTF-NMNNLGIVSPYSQQVWLIS 625
Query: 661 ERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRA--------SDKKSIGFLADYRR 712
++ K+ +++ V++ TVDG QGREKDV IFS VR+ + KK +GFL+D RR
Sbjct: 626 KQLKKM----NEENVEVKTVDGFQGREKDVIIFSSVRSKFISENQKNPKKGVGFLSDARR 681
Query: 713 MNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRV 755
MNV ++R + +++VV + ++ W NL+ + + +RV
Sbjct: 682 MNVSLSRCRQTLIVVCDIYKISCNERWRNLINYSIQLGSCYRV 724
>gi|408388581|gb|EKJ68262.1| hypothetical protein FPSE_11565 [Fusarium pseudograminearum CS3096]
Length = 2079
Score = 314 bits (805), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 237/775 (30%), Positives = 374/775 (48%), Gaps = 87/775 (11%)
Query: 16 RFCKIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEE 75
R IL WD F ND V EV Y D Y TF PLL E
Sbjct: 1127 RLHNTILSWDIF------HGGNDPPKGPV------ASEVATKYSDPKTYQDTFFPLLASE 1174
Query: 76 VKAQIIQKKDEEEVQEWKLRLVMECG-----EADGFHLPSVTYEADEVESISPNDLLLLS 130
+ KDE Q + +++ EA F +P V + +S D+LL+S
Sbjct: 1175 AWRSFVTAKDEITSQAFGMKIASRASVDSYLEAT-FTMPVVQ---NRERGVSEGDILLVS 1230
Query: 131 KEEFKEGSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSS 190
+ E G HC A + R+ E++ I + R ++ ++T +
Sbjct: 1231 ESENPLGDQ--------TARHCLARVHRI--TYKKELVEITYRV--ASRNNSMTQVLTPN 1278
Query: 191 VSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLH 250
VS +F +KI +++TI REY AL S+ D IL+A D++ K+ +
Sbjct: 1279 VS-----VFGVKITNMTTIEREYAALESLQYYDLMDEILNAKPSPILRYDEA-KVNNCMQ 1332
Query: 251 EYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKG-- 308
Y + A + H+ F LIQGPPGTGKT+TI+ ++ +L ++ ++G
Sbjct: 1333 NYSLNHGQAMAVLGAHDN---DGFTLIQGPPGTGKTKTIVAMVGTLLSEQLSQASNQGFP 1389
Query: 309 -GLREIKRGPELPMHEKYNHWGRASPWLVGA--NPRDNIMPIDGDDGFFPTTGNELKPEV 365
G+ G + P ++K R+ LV A N + + + G +G K +
Sbjct: 1390 VGVPLRPTGLQAPNNQK-----RSKKLLVCAPSNAAVDELVLRLKAGVKTISG---KTKS 1441
Query: 366 VNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPK-------------IVR 412
+N R R + A + LDE+V L + ++ K ++R
Sbjct: 1442 INVLRLGRSDAINAAVRDVTLDELVKARLEGDQTKDKAKANRDKLHEDAGKIKEQLAVLR 1501
Query: 413 IGLKAH--------HSVNSVAIDHLVEQKRDDSA---ADKQKHGATRKD----RDSIRSA 457
++A ++ +S D L ++ D ADK + ++ R ++
Sbjct: 1502 PLMEASKDHEDRTTYTKHSREFDALKRRQMDIGKQIDADKSSGNSVAREMEVRRRQVQQE 1561
Query: 458 ILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDP 517
ILN A ++C+TLS SG + L+ F+ VIIDEAAQ VE + L+PL GC + LVGDP
Sbjct: 1562 ILNNAQVLCATLSGSGHEMFRNLDVEFETVIIDEAAQCVELSALIPLKYGCYRCVLVGDP 1621
Query: 518 VQLPATVISPVAEHLGYGTSLFKRLQRAGYP--VKMLKTQYRMHPEVRSFPSREFYDEAL 575
QLP TV+S A GY SLF R+Q+ +P V +L QYRMHPE+ FPSREFY+ L
Sbjct: 1622 KQLPPTVLSQSAAKFGYDQSLFVRMQQ-NHPDWVHLLDMQYRMHPEISMFPSREFYEGQL 1680
Query: 576 EDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLIS 635
DG ++ + + WH+ GP+ FFD+ +G +++ S +N E+D + ++ + +
Sbjct: 1681 ADGQNMHELRQQPWHQSALLGPYRFFDV-QGVQARGHKGQSLVNTRELDVAMQMYDRFSN 1739
Query: 636 MYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSC 695
Y + + ++ II+PY+ Q+ + + RF+ +G +++ T D QGRE ++ IFSC
Sbjct: 1740 EYGECDLTGKIGIITPYKAQLFELRNRFRSRYGEGITNIIEFNTTDAFQGRECEIIIFSC 1799
Query: 696 VRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQD 750
VRAS IGF+ D RRMNVG+TRAKSS+ ++G + L + + W L++ A+ +D
Sbjct: 1800 VRASSTGGIGFMTDIRRMNVGLTRAKSSLWILGDSRALVQGEFWKKLIEDAQSRD 1854
>gi|258572474|ref|XP_002544999.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237905269|gb|EEP79670.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 2153
Score = 314 bits (805), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 254/823 (30%), Positives = 394/823 (47%), Gaps = 98/823 (11%)
Query: 19 KIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKA 78
K +L WD+F + G+ V +T+ D +Y TFEPLL E
Sbjct: 1088 KTLLSWDFFA----------TGDLPPNCGRTDYTLVSNTFADALEYQRTFEPLLILEAWQ 1137
Query: 79 QIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADEVE--SISPNDLLLLSKEEFKE 136
K++ + +++++ D F S + V+ + D++LLSK
Sbjct: 1138 GFQSDKEDGTFKAFEIKVANRVS-VDNFVEVSTSMAPQTVKDFGLGEADIILLSK----- 1191
Query: 137 GSTFPTTYAFALVEHCQANL-----LRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSV 191
S+ P T A HC A + R +M + V +N L+N S S
Sbjct: 1192 -SSNPATDKQA--PHCLARVSGLVKKRGQMEITFRVNPMNP-------LINAISPGAS-- 1239
Query: 192 SAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHE 251
L+S++I SL+ + REY AL ++ D I+ A + S + + +L+
Sbjct: 1240 ------LYSIRISSLTPLEREYGALMALRYYDLSDEIIRA-KPSPILNYSAEAVKNILNT 1292
Query: 252 YIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLR 311
Y N N +Q +A+ + AF LIQGPPG+GKT+TI+ L+ A+L T L
Sbjct: 1293 Y---NLNLAQSKAVKSAIDNDAFTLIQGPPGSGKTKTIVALVGALLSNT---------LS 1340
Query: 312 EIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNSSRR 371
E + P P + + +N + + + +G G V+ R
Sbjct: 1341 EHRIAPPRPGDKTARSMAKKLLVCAPSNAAVDELVMRFKEGVKTLYGRSQNISVIRLGRS 1400
Query: 372 YRVRVLVCAPSNSALDEIV-LRLLNTGIRDENIRS----YTP-------------KIVRI 413
+ V + LDE+V +L G ++ N R YT ++ +
Sbjct: 1401 DAINANVL---DVTLDELVNAKLSQAGQKNGNERDLQSLYTEHKETSNKFNEIRERLDQC 1457
Query: 414 GLKAHHSVNSVAIDH-LVEQKRD------DSAADKQKHGATRKD--RDSIRSAILNEAVI 464
K N + + L+++KR DSA DK + A + R I+ I++ A +
Sbjct: 1458 RAKGQAVPNELDREFDLLKRKRAQLSQAIDSARDKNQAAARNAELTRRKIQQEIIDGAHV 1517
Query: 465 VCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATV 524
+C+TLS SG + L+ F+ VIIDEAAQ++E + L+PL GC + LVGDP QLP TV
Sbjct: 1518 ICATLSGSGHDMFQTLSIEFETVIIDEAAQSIELSALIPLKYGCSKCILVGDPKQLPPTV 1577
Query: 525 ISPVAEHLGYGTSLFKRLQRAGYP--VKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVE 582
+S A Y SLF R+Q A +P V +L TQYRMHPE+ FPS FYD L+DG D+
Sbjct: 1578 LSKEASRFQYEQSLFVRMQ-ANHPQDVHLLDTQYRMHPEISRFPSTAFYDGRLQDGPDMA 1636
Query: 583 DYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKS 642
R WH GP+ FFD+ S P G S +N+ E+ + L+ +LI+ +P
Sbjct: 1637 RLRMRPWHNTSLLGPYRFFDVQGMHASAPKGH-SLVNLAELRVAMRLYERLIADFPTYDF 1695
Query: 643 SSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKK 702
S ++ II+PY+ Q+++ +++F +G K V+ T D QGRE +V IFSCVRAS
Sbjct: 1696 SGKIGIITPYKGQLRELKQQFANKYGNAIFKAVEFNTTDAFQGRECEVIIFSCVRASS-H 1754
Query: 703 SIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDC-----LFRVSK 757
IGFLAD RRMNVG+TRAKSS+ V+G + +L + W LVK A +++ ++++ +
Sbjct: 1755 GIGFLADIRRMNVGLTRAKSSLWVLGNSQSLVRGEFWRGLVKDARERNLYTDGDVYKLLQ 1814
Query: 758 PYASFFSDENLESMRKNATTDNVQGADGHVPHDDETMHYANTG 800
++E + +A D++ G+D +P + TG
Sbjct: 1815 TPQKLLEPNDIEMV--DAPPDSIPGSD--LPSRPASAMTGGTG 1853
>gi|156842218|ref|XP_001644478.1| hypothetical protein Kpol_520p43 [Vanderwaltozyma polyspora DSM
70294]
gi|156115121|gb|EDO16620.1| hypothetical protein Kpol_520p43 [Vanderwaltozyma polyspora DSM
70294]
Length = 2267
Score = 314 bits (805), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 249/803 (31%), Positives = 395/803 (49%), Gaps = 93/803 (11%)
Query: 2 AVDKDKPQDEASIFR-------FCKIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREV 54
AVD+ K ++E R F + IL WDY R + D +V
Sbjct: 1084 AVDRAKLEEEYMRKRLNVDLNPFYETILQWDYTR----------TDEYPTDYTNGTYTDV 1133
Query: 55 KDTYKDVDDYLATFEPLLFEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYE 114
KD+Y+ V +Y PLL E + +D EE + + + + +D + + + +
Sbjct: 1134 KDSYRSVTEYQNVMRPLLLLECWQGLRAARDREEHKSFSIIVGNRTAVSDFYEVYASVRK 1193
Query: 115 ADEVES-ISPNDLLLLSK-EEFKEGSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINK 172
+ ES IS +DL++L+ + G + + C A + L+ GE + I
Sbjct: 1194 SKLAESDISESDLIVLALLPDVLPGQNITSETFKRCSQTCLAKVKSLKN-TKGENVDITL 1252
Query: 173 DAVKSQRLLNIHSLITSSVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLI--LS 230
+S + S + + ++K+ ++T+ REY +L L F DL+ +
Sbjct: 1253 RIHRSHKF--------SKFLTLRSEIHAMKVMQMTTVEREYTSLEG---LEFYDLVPEIL 1301
Query: 231 ASEKSSGSQDQSWKIPGLLHEYIKENH--NASQLEAIHEGLLRKAFVLIQGPPGTGKTQT 288
+E S + S +I E +KEN+ N SQ AI ++++ F LIQGPPGTGKT+T
Sbjct: 1302 KAEASENQANLSDEI-----EMVKENYKLNTSQAAAIVNTVVQEGFSLIQGPPGTGKTKT 1356
Query: 289 ILGLLSAILH---ATPARVHSKGGLREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIM 345
ILG++ L + P+ V K G P K +P A + ++
Sbjct: 1357 ILGIIGYFLSKVSSLPSNVIKKPG-EAYSVSPSTESLLKKQKVLICAP--SNAAVDEIVL 1413
Query: 346 PIDGDDGFFPTTGNELKPEVVNSSRRYRVRVLVCAPSNSALDEIVLR-LLNTGIRDENIR 404
+ G G T GN KP++V R V NSA+ ++ L L++ + ++N
Sbjct: 1414 RLKG--GVIDTEGNLFKPKLVRIGRSDAV--------NSAIKDVTLEELVDKRVAEKNYN 1463
Query: 405 -SYTPKI-------------VRIGLKAHH-SVNSVA----IDHLVEQKRDDSAAD----- 440
S P + +R L + + SV S I L + R+ S
Sbjct: 1464 ISSNPDLERKFNSCVMKRRELRAKLDSENGSVTSTMSTEDISKLQLEIRELSKEINELGK 1523
Query: 441 -----KQKHGATRKDRD----SIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDE 491
++++ T ++RD + ++ IL + I+CSTLS S +L+ L FD VIIDE
Sbjct: 1524 ERDEIREQNSITYRNRDLDRRNAQARILASSSIICSTLSGSAHDVLASLGVKFDTVIIDE 1583
Query: 492 AAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKM 551
A Q E + ++PL G K+ +VGDP QLP TV+S A L Y SLF R+++ P +
Sbjct: 1584 ACQCTELSAIIPLRYGGKRCIMVGDPNQLPPTVLSGAASKLNYNQSLFVRIEKNSTPY-L 1642
Query: 552 LKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQP 611
L QYRM+P + FPS EFY L+DG ++E T R WH+ + FFDI G++ Q
Sbjct: 1643 LDVQYRMNPAISVFPSLEFYCGRLKDGPNMEAITKRPWHDVAPLSTYRFFDIVSGRQEQN 1702
Query: 612 AGSGSWINIDEVDFVLLLFHKLISMYP-QLKSSSQLAIISPYRHQVKQFQERFKETFGVE 670
+ S++N++E+ + L L+ + + S ++ IISPY+ QV + + F+ FG
Sbjct: 1703 IKTMSYVNMEEIRVAIELIDYLLKKFENKYDFSGKIGIISPYKEQVIKMRREFRNFFGSP 1762
Query: 671 SQKVVDITTVDGCQGREKDVAIFSCVRASDK-KSIGFLADYRRMNVGITRAKSSILVVGC 729
K VD T+DG QG+EK++ I SCVRASD S+GFL D+RRMNV +TRAKSS+ ++G
Sbjct: 1763 ISKYVDFNTIDGFQGQEKEIIIISCVRASDSGTSVGFLKDFRRMNVALTRAKSSMWILGH 1822
Query: 730 ASTLREDKHWNNLVKSAEKQDCL 752
+L+ +K WN+L+ A++++ L
Sbjct: 1823 HKSLQNNKLWNHLISDAKERNML 1845
>gi|361125646|gb|EHK97679.1| putative Helicase SEN1 [Glarea lozoyensis 74030]
Length = 1377
Score = 314 bits (804), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 255/817 (31%), Positives = 385/817 (47%), Gaps = 168/817 (20%)
Query: 11 EASIFRFCKIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEP 70
E ++ R IL WD F N+ R + D + D+D Y TF P
Sbjct: 509 EPNMDRLYTEILEWDLFHEGDTPPTSNE------------YRRIADNFLDLDIYKKTFTP 556
Query: 71 LLFEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGF-----HLPSVTYEADEVESISPND 125
LL EV ++ K+E + ++ V+ D F +P +T D ++ D
Sbjct: 557 LLIAEVWRSLVVAKEENTSRPIEI-TVLNRMSVDKFMEISAKMP-MTLNRDM--KLNERD 612
Query: 126 LLLLSK-EEFKEGSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIH 184
++LLSK ++ + P HC A + R ++I + +K R ++
Sbjct: 613 IVLLSKCKDPMKNREEP---------HCLARVDR--TTRKKDIIEVT---LKVSRNIDQE 658
Query: 185 SLITSSVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASE-KSSGSQDQS- 242
L S++A ++ ++K+ ++T REY AL SL + DL E K S Q S
Sbjct: 659 LLKGLSMNA---KIHTVKLADMNTTQREYAAL---SSLEYYDLCAEVMEAKPSPLQKYSD 712
Query: 243 WKIPGLLHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPA 302
KI L +Y N N Q +AI F LIQGPPG+GKT+TI+ ++ A+L T A
Sbjct: 713 EKIDNLKAKY---NLNKGQSQAILSANDNDGFTLIQGPPGSGKTKTIIAMVGALL--TQA 767
Query: 303 RVHSKGGLREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELK 362
R + P GRA D P+ G + K
Sbjct: 768 LQQQNAQPRALAPMP-----------GRA-------------------DKSTPSIGPKKK 797
Query: 363 PEVVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLK--AHHS 420
+L+CAPSN+A+DE+V+RL GI+ + ++RIG A+
Sbjct: 798 -------------LLICAPSNAAVDELVVRL-KEGIQPLSGPHQKINVIRIGRSDVANAG 843
Query: 421 VNSVAIDHLV-------------EQKRD----DSAADKQKHGATRKDRDSIRSA------ 457
V V +D LV +Q RD ++ A K++ A R D++R
Sbjct: 844 VQDVMLDELVRRKMEGDDSGNKVQQDRDKLHKEAGAIKEQLNALRPQMDAMRQKSDTDGE 903
Query: 458 ---------------------------------------------ILNEAVIVCSTLSFS 472
I++ A ++CSTLS S
Sbjct: 904 RKLQRQFDELKRKQAHLGNKIDEEKQSGNTFARQNEINRRKYQQEIIDGAHVLCSTLSGS 963
Query: 473 GSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHL 532
G + L+ F+ VIIDEAAQ +E + L+PL GC + LVGDP QLP TV+S A+
Sbjct: 964 GHDMFKHLSIEFETVIIDEAAQCIELSALIPLKYGCSKCILVGDPEQLPPTVLSRSAQSY 1023
Query: 533 GYGTSLFKRLQRAGYP--VKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWH 590
GY SLF R+Q+ +P V +L TQYRMHP++ SFPS++FY L DG + + WH
Sbjct: 1024 GYEQSLFVRMQK-NHPQDVHLLDTQYRMHPDISSFPSQQFYKGRLLDGDGMAKLRRQAWH 1082
Query: 591 EYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIIS 650
GP+ FFD+ EG ++Q AG S+IN+ E++ + L+ +L + Y + + ++ II+
Sbjct: 1083 ASTILGPYRFFDV-EGVQTQGAGH-SFINVPELNAAMQLYQRLKTDYQNIDFTGKIGIIT 1140
Query: 651 PYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADY 710
Y+ Q+ ++RF+ FG ++ T D QGRE+++ IFSCVRA IGFL+D
Sbjct: 1141 TYKAQLNALKDRFQNRFGESIFNEIEFNTTDAFQGREREIIIFSCVRAKSTGGIGFLSDI 1200
Query: 711 RRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAE 747
RRMNVG+TRAKSS+ V+G + +LR+ + WN L++ A+
Sbjct: 1201 RRMNVGLTRAKSSLWVLGDSRSLRQGEFWNKLIEDAK 1237
>gi|209880584|ref|XP_002141731.1| hypothetical protein [Cryptosporidium muris RN66]
gi|209557337|gb|EEA07382.1| hypothetical protein, conserved [Cryptosporidium muris RN66]
Length = 1011
Score = 314 bits (804), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 255/832 (30%), Positives = 404/832 (48%), Gaps = 102/832 (12%)
Query: 17 FCKIILGWDYFRLVKES--QERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFE 74
F +IIL WD+F +KE Q+ S K ++E+ + +++Y+ +F L
Sbjct: 42 FDRIILSWDFFEDIKEEPYQKSEKLYSYNSRYEKCEIKEIPARFSSLEEYIESFFSLFLL 101
Query: 75 EVKAQIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYE----ADEVESI--SPNDLLL 128
E + Q IQ+ E+ ++ ++E + SV +E D + SP D++L
Sbjct: 102 ECQ-QSIQRAKHIEMSSFQHFTMLESKGCIDSNFISVRFEKLLNVDTGNPVYFSPQDIVL 160
Query: 129 LSKEEFKEGSTFPTT-------YAFALVEHCQANLLRLRM-----YLAGEVIH-----IN 171
+ +E P + F +V + ++ L L YL GE I I+
Sbjct: 161 IIFPANEELFNIPDKNLSDEPYHVFGVVHNFKSGKLTLNTINPLYYLEGEKIKRLPSTIS 220
Query: 172 KDAVKSQRLLNIHSLITSSVSAVEKRLFSL-KICSLSTIAREYLALRSVGSLPFKDLILS 230
RL + + +K + + +I S +T REY AL S+ LP KD IL
Sbjct: 221 NTERWRDRLTKYNQYLQLGRDKTKKTSWWISRITSFATNYREYSALLSLQDLPLKDDILC 280
Query: 231 ASEKSSGSQDQSWKIPGLLHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTIL 290
K+ S++ S IP L + +++ +N SQL A++E L + LIQGPPGTGKT TI+
Sbjct: 281 L--KNPVSRNGSLSIPDTLLDSLEKIYNDSQLSALNECLKYQGITLIQGPPGTGKTTTII 338
Query: 291 GLLSAILHATPARVHSKG----------GLREIKRGPELPMHEKYNHWG-----RASPWL 335
G++SA+L + R K + E KR E+ ++ G + PW
Sbjct: 339 GIISALLSSNYERSSCKDEVLRERDTSLTINEKKRKVEVYKYDDIEKVGLSLIRYSQPWC 398
Query: 336 VGAN--PRDNIMPIDGDDGFFPTTGNELKPEVVNSSRRYRVRVLVCAPSNSALDEIVLRL 393
++ P + + + ++ P +++ + R+LVCAPSN+A+D IV RL
Sbjct: 399 YNSDYVPWYDWKANNPEICTTKLIESKTIPLDISNRQTGPRRILVCAPSNAAIDAIVRRL 458
Query: 394 L------NTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQKRDDSAADKQKHGAT 447
+ GI D N Y P IVR G H + +++ ++++ + + ++ +
Sbjct: 459 VADPIREQGGILDANGVRYNPTIVRAGPNYHPDLLEYSLEVKLQRRLIRNGYNPKE--SK 516
Query: 448 RKDRDSIRSAILNEAVIVCSTLSFSGSA-LLSKLNH------------GFDVVIIDEAAQ 494
+ R ++ I+ E+ ++C+TLS GS L+S L+ FD VIIDEA+Q
Sbjct: 517 PEVRQQVQWKIIQESQVICATLSVCGSKELVSILDQSSSPNEKSKKIIAFDTVIIDEASQ 576
Query: 495 AVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKT 554
VE +TL+PL GCK++ LVGDP QLPATV+S +A Y SLF+RLQ G PVKML
Sbjct: 577 GVELSTLIPLKLGCKRLILVGDPKQLPATVLSRIAILHKYDISLFQRLQLNGLPVKMLSM 636
Query: 555 QYRMHPEVRSFPSREFYDEALEDGSDVEDY--TTRDWHEYRCFGPFSFFDIHEGKESQPA 612
QYRMHP + FPS+ FY+ L+D + D + W F P +F ++ S+
Sbjct: 637 QYRMHPVISEFPSKRFYNGELQDYPGIIDARKSIIPWDSIPFFKPLTFLSVN----SEEI 692
Query: 613 GSGSWINIDEVDFVL----LLFHKLISMYPQLKSSS-------QLAIISPYRHQVKQFQE 661
+ S N E + V LL L + +L S S ++AIISPY QV+ +
Sbjct: 693 KNKSISNPIEAELVCQLVELLGLILTEVNEKLPSKSDVNNWYDKIAIISPYNEQVRLIKS 752
Query: 662 RFKETFGVESQKV--VDITTVDGCQGREKDVAIFSCVRA----------------SDKKS 703
K+ F + S + +D+ T+DG QG+E+D IFS VRA + + +
Sbjct: 753 MIKKRFNLPSNIICPIDVCTIDGFQGQERDYIIFSAVRAQYIEPNGIIGNNNRLETLRTN 812
Query: 704 IGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRV 755
GFLAD RR+NV +TRAK ++ ++G L + W +L +++C F +
Sbjct: 813 AGFLADIRRINVALTRAKRNLWIIGHGRYLLGNPEWAHLWNYTAEKNCQFSI 864
>gi|302308150|ref|NP_984975.2| AER115Wp [Ashbya gossypii ATCC 10895]
gi|299789319|gb|AAS52799.2| AER115Wp [Ashbya gossypii ATCC 10895]
gi|374108198|gb|AEY97105.1| FAER115Wp [Ashbya gossypii FDAG1]
Length = 2027
Score = 313 bits (802), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 235/777 (30%), Positives = 381/777 (49%), Gaps = 80/777 (10%)
Query: 17 FCKIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEV 76
F +L WDY K+ + +D S+K ++V D + ++Y A EPLL E
Sbjct: 1088 FYDQVLRWDY---TKKDEYPDDGTSEKY-------KDVADQFSSPEEYQAVMEPLLLLEC 1137
Query: 77 KAQIIQKKDEEEVQEWKLRLVMECGEADGFHL-PSVTYEADEVESISPNDLLLLSKEEFK 135
+ +D E + + + +D + + +++ + + I+ D+++L
Sbjct: 1138 WQGMCAARDREVHKAFSFIVGNRTVVSDFYEVYAAISKKVVQQADINEADMIVLGYFPDI 1197
Query: 136 EGSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSAVE 195
+ T F +H +R G+ + + +S + N +L T
Sbjct: 1198 NPNKTLTNDDFKRAQHTCFAKVRGIKNAKGDNMDLTLRIHRSHKFANFLTLRT------- 1250
Query: 196 KRLFSLKICSLSTIAREYLALRSVGSLPFKDL---ILSASEKSSGSQDQSWKIPGLLHEY 252
+ ++K+ ++T+ REY +L+ LPF DL IL+AS +QS E
Sbjct: 1251 -EIHAVKVMQMTTVEREYTSLKG---LPFYDLVGQILTASPTDDIPLEQSEV------EA 1300
Query: 253 IKENH--NASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGL 310
++ N+ N SQ +A+ + + F LIQGPPGTGKT+TILG++ L +K
Sbjct: 1301 VQRNYKLNTSQAKAVISSVKKLGFSLIQGPPGTGKTKTILGVVGFFL------TTAKALP 1354
Query: 311 REIKRGPELPMHEKYNHWGRASPWLVGA--NPRDNIMPIDGDDGFFPTTGNELKPEVVNS 368
+ R P + L+ A N + + + +G T G KP++V
Sbjct: 1355 SNVIRNPTESNATSTEMLLQKQKVLICAPSNAAVDELVLRLREGLVDTDGKLFKPKLVRI 1414
Query: 369 SRRYRVRVLVCAPSNSALDEIV-LRLLNTGIR---DENI--------------------- 403
+ V + + L+E+V R LN D N+
Sbjct: 1415 GKSDAVNAAI---RDLTLEELVDKRALNQSYEINHDPNLDQSFHDAVAERRKLRDMMNKE 1471
Query: 404 ------RSYTPKIVRIGLKAHHSVNSVAIDHLVEQKRDDSAADKQKHGATRKDRDSIRSA 457
+ T +I +I LK S I+ L +Q+ + + + ++ ++
Sbjct: 1472 DGSPTSKLSTDEISKIQLKLRDL--SKKINELGKQRDELRERNAVNYRNRELNKRKAQAR 1529
Query: 458 ILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDP 517
IL E+ I+CSTLS S +L+ L FD VI+DEA Q E ++++PL G K+ +VGDP
Sbjct: 1530 ILAESDIICSTLSGSAHDVLASLGVKFDTVIVDEACQCTELSSIIPLRYGGKRCIMVGDP 1589
Query: 518 VQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALED 577
QLP TV+S A + Y SLF R+++ P +L QYRMH + +FPS EFYD L++
Sbjct: 1590 NQLPPTVLSGAASNFKYNQSLFVRMEKNCKP-HLLDVQYRMHSMISAFPSLEFYDGRLKN 1648
Query: 578 GSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMY 637
G +++ TR WHE + FGP+ FFDI GK+ Q A + S++N DE + + KL+S Y
Sbjct: 1649 GPNMDQVNTRPWHESQPFGPYRFFDIITGKQQQNAKTMSYVNYDECQVSIEMIDKLLSQY 1708
Query: 638 -PQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCV 696
++ S ++ IISPYR Q++ + F+ FG K +D T+DG QG+EK++ I SCV
Sbjct: 1709 EKKVDFSGKIGIISPYREQMQMMKRAFRSYFGGTIFKYIDFNTIDGFQGQEKEIIIISCV 1768
Query: 697 RASDKK-SIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
RA D K +GFL D+RRMNV +TRAK+S+ ++G +L ++K W +L+ A+ +DCL
Sbjct: 1769 RADDSKGGVGFLKDFRRMNVALTRAKASLWILGHHKSLYKNKLWMHLISDAKGRDCL 1825
>gi|354545469|emb|CCE42197.1| hypothetical protein CPAR2_807460 [Candida parapsilosis]
Length = 1950
Score = 313 bits (801), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 249/787 (31%), Positives = 379/787 (48%), Gaps = 97/787 (12%)
Query: 19 KIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKA 78
+ IL W+Y RND + K +VKDTYKDV +Y++ EPL E
Sbjct: 1057 QTILPWNY-------NLRNDYPT----HDKSAYSKVKDTYKDVKEYVSIMEPLFMLECWQ 1105
Query: 79 QIIQKKDEEEVQEWKLRLVMECGEADGFH--LPSVTYEADEVESISPNDLLLLSKEEFKE 136
QI +D + +++ LV DGF S++ + E ++ NDLL+++ + E
Sbjct: 1106 QIQSARDTIDEDPFEI-LVGTRTSVDGFFDIFTSMSKKTIENRKLTDNDLLVIACDN--E 1162
Query: 137 GSTFPTTY-AFALVEHCQANLLRLRMYLAGEVIHINKDAVK-SQRLLNIHSLITSSVSAV 194
P + + L ++R E+ H+N + + R+ L+ + A
Sbjct: 1163 SIVQPKERRQYIKSPNTPCCLAKIR-----EIKHVNPEYSDVTLRIAKSSPLV--GMLAP 1215
Query: 195 EKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIK 254
+ + +++ + T+ RE+ +L + D I+SA+ D + Y
Sbjct: 1216 KATILGMRVMQMVTVEREFSSLHGLQYYDLVDSIISATPAIPKQVDDK----DVEQMYKH 1271
Query: 255 ENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLL--------------------- 293
+ N SQ +AI + F LIQGPPGTGKT+TILG++
Sbjct: 1272 FDVNMSQAKAIIGSYQSEGFSLIQGPPGTGKTKTILGIVGYSLSHGVNEKAIEAPSKSAS 1331
Query: 294 ----SAILHATPAR-------VHSKGGLREIKRGPELPMHEKYNHWGRASPWLVGANPRD 342
+ IL P+ V + G+R K G +P+ K GR+ D
Sbjct: 1332 PSSRAKILICAPSNAAVDELVVRLRNGVRNSK-GENMPL--KVVRLGRS----------D 1378
Query: 343 NIMPIDGDDGFFPTTGNELKPEVVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDEN 402
I D EL+ + V+ + +R + + + LR + + DE
Sbjct: 1379 AINQAVRDLTLEELVDKELQTKQVDVATDQNLRPEL---NKKTQERDTLR---SRLNDET 1432
Query: 403 IRSYTPKIVRIGLKAHHSVNSVAIDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEA 462
+ S V+ L+ + S L EQ+ S A + K DR +I++ IL+EA
Sbjct: 1433 LDSKERDDVQQKLREINKQRSELAKKLDEQRERTSIAYRNKE----IDRRNIQARILSEA 1488
Query: 463 VIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPA 522
I+C+TLS S L++ L FD VIIDEA Q E A ++PL GC++ +VGDP QLP
Sbjct: 1489 NILCATLSGSAHDLVANLAVTFDQVIIDEACQCSESAAIIPLRYGCRRCIMVGDPNQLPP 1548
Query: 523 TVISPVAEHLGYGTSLFKRLQRAGYP--VKMLKTQYRMHPEVRSFPSREFYDEALEDGSD 580
TV+S A L Y SLF R+Q+ +P + +L TQYRMHP + FPS EFY L DG
Sbjct: 1549 TVLSQTAASLNYDQSLFVRMQK-NHPDSIYLLNTQYRMHPMISKFPSAEFYQSKLIDGPG 1607
Query: 581 VEDYTTRDWHEYRCFGPFSFFDI---HEGKESQPAGSGSWINIDEVDFVLLLFHKLISMY 637
+++ TR WH P+ FFDI HE E + S N +E + L L K+++M
Sbjct: 1608 MQEKNTRPWHSVDPLSPYRFFDIVSRHEKNEL----TRSLYNTEEANVCLQLVQKMMTMV 1663
Query: 638 PQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVR 697
PQ + ++ IISPY+ Q+K + F+ FG +D TVDG QG+EK++ I SCVR
Sbjct: 1664 PQKDIAGKIGIISPYKEQIKTIKRVFERAFGRLIFNEIDFNTVDGFQGQEKEIIIMSCVR 1723
Query: 698 ASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRVSK 757
AS SIGFL+D RRMNV +TRA +++ ++G ++L D+ W L++ AEK+ V+K
Sbjct: 1724 ASANGSIGFLSDIRRMNVALTRACTTLWILGNKNSLARDEVWKRLIEDAEKR---IAVTK 1780
Query: 758 PYASFFS 764
Y+ F S
Sbjct: 1781 AYSGFLS 1787
>gi|296413292|ref|XP_002836348.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295630165|emb|CAZ80539.1| unnamed protein product [Tuber melanosporum]
Length = 1971
Score = 313 bits (801), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 245/772 (31%), Positives = 354/772 (45%), Gaps = 158/772 (20%)
Query: 53 EVKDTYKDVDDYLATFEPLLFEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVT 112
+V T+ Y TFEPLL E + Q K+E KL LV AD F +T
Sbjct: 1050 KVASTFGSYAAYKKTFEPLLLLEAWQALKQAKEEAPQPVVKLNLVTRMS-ADNFVELEIT 1108
Query: 113 YEA-DEVESISPNDLLLLSKEEFKEGSTFPTTYAFALVEHCQANLLRLRMYLAG---EVI 168
+ +E +D++L+S + A HC A + L+ G +
Sbjct: 1109 IDGMNERNRWLESDVVLVSVGK--------KPLASKDSPHCLARVHSLKKKFPGANTTEV 1160
Query: 169 HINKDAVKSQRLLNIHSLITSSVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLI 228
+ D N+ + T L++ +I REY AL + + I
Sbjct: 1161 QLRCDPSPQMVQENMRNGST---------LYATRIMGFVPTEREYSALMCLKYYDLEQEI 1211
Query: 229 LSASEKS--SGSQDQSWKIPGLLHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKT 286
L+A S ++ Q + GL N Q AI + F LIQGPPGTGKT
Sbjct: 1212 LAAKPSSLEEPTEKQIVRTRGLYKV------NEPQARAILSAVKNTGFTLIQGPPGTGKT 1265
Query: 287 QTILGLLSAILHATPARVHSKGGLREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMP 346
+T++G++ A+L TP K G I+ P + +P+
Sbjct: 1266 KTVVGIVGALL--TP-----KVGSTVIQ-----------------IPGSMNKSPK----- 1296
Query: 347 IDGDDGFFPTTGNELKPEVVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSY 406
PTT ++LVCAPSN+A+DE+VLR GI
Sbjct: 1297 --------PTTK----------------KLLVCAPSNAAVDELVLRF-KKGILTAKGEEM 1331
Query: 407 TPKIVRIGLK--AHHSVNSVAIDHLVEQ-----------KRDDSAADKQKHGA------- 446
PK+VRIG + +V V +D LVE+ K D +QKH A
Sbjct: 1332 QPKVVRIGKSDAVNFTVRDVTLDELVERKMAPTKESANSKNADMDELRQKHRAILDERDA 1391
Query: 447 -------------------------------TRKDRD------------------SIRSA 457
TR+ D I+
Sbjct: 1392 KLKQLEDARAKSIDPGTLQSEIDSLNATLRETRRSLDLKRDQKKESSRNAEVLKRRIQQE 1451
Query: 458 ILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDP 517
I++EA I+C+TLS +G LL +N F+ VIIDEAAQ+VE + L+PL GC++ LVGDP
Sbjct: 1452 IMDEAHIICATLSGTGHDLLRNINVDFETVIIDEAAQSVELSALIPLKFGCEKCILVGDP 1511
Query: 518 VQLPATVISPVAEHLGYGTSLFKRLQRAGYP--VKMLKTQYRMHPEVRSFPSREFYDEAL 575
QLP TV+S A Y SLF R+Q +P V +L QYRMHP + SFP ++FYD L
Sbjct: 1512 KQLPPTVLSREAAKFSYEKSLFVRMQE-NHPKDVHLLSIQYRMHPMISSFPRKQFYDSEL 1570
Query: 576 EDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLIS 635
EDG ++++ T WH+ + P+ FF+I G+ES G S +N E L L+ +L +
Sbjct: 1571 EDGENMKELRTEVWHKNPIYAPYRFFNI-AGQESA-GGLHSLVNRQEAQSALSLYQRLTA 1628
Query: 636 MYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSC 695
+PQ ++ II+PY+ Q+ + F++ +G +D T D QGRE+D+ IFSC
Sbjct: 1629 DFPQTNFDGKIGIITPYKQQINLLKTTFRDVYGENICDTIDFNTTDAFQGRERDIIIFSC 1688
Query: 696 VRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAE 747
VRAS + IGFL+D RRMNVG+TRAK S+ V+G +++L ++ W +LV+ A+
Sbjct: 1689 VRASQEGGIGFLSDVRRMNVGLTRAKFSLFVLGHSTSLMRNRLWASLVQDAK 1740
>gi|121704136|ref|XP_001270332.1| tRNA-splicing endonuclease, putative [Aspergillus clavatus NRRL 1]
gi|119398476|gb|EAW08906.1| tRNA-splicing endonuclease, putative [Aspergillus clavatus NRRL 1]
Length = 2137
Score = 312 bits (799), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 244/807 (30%), Positives = 372/807 (46%), Gaps = 161/807 (19%)
Query: 19 KIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKA 78
+ ILGWD+F + G+ V +T++D +Y TFEPLL E
Sbjct: 1084 RTILGWDFFA----------NGDLPPNSGRTDYSLVSNTFRDPIEYQKTFEPLLILEAWQ 1133
Query: 79 QIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADEVE--SISPNDLLLLSKEEFKE 136
K+E + +++++ D F S + E + I D++LLSK
Sbjct: 1134 GFNSAKEEGTFRPFEIKVATRLS-VDSFVEVSTILPSMEAKDYGIGEADIILLSK----- 1187
Query: 137 GSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSAVEK 196
S+ PT+ + A HC A + ++ + V+ +N + +S+ A
Sbjct: 1188 -SSRPTSDSSA--PHCLARIAS---------VNRKRGTVEVSYRVNPGNPFINSL-APGA 1234
Query: 197 RLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIKEN 256
++ KI SL+ + REY AL + L + DL E K + I EN
Sbjct: 1235 MIWGAKITSLTPLEREYGALMA---LQYYDL---CEEVIRAKPSPILKYSDATLKPIAEN 1288
Query: 257 HNA--SQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLREIK 314
+N +Q +AI L AF LIQGPPG+GKT+TI+ L+ A+L
Sbjct: 1289 YNVNPAQAKAIKSALDNDAFTLIQGPPGSGKTKTIVALVGALL----------------- 1331
Query: 315 RGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNSSRRYRV 374
N++ G PT +P V ++ +
Sbjct: 1332 ---------------------------SNVLGNQGVAISRPTGVTNSRPPVRTTTSK--- 1361
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVN--SVAIDHLVEQ 432
++L+CAPSN+A+DE+V+R G++ R ++R+G + N V +D LV
Sbjct: 1362 KLLICAPSNAAVDELVMR-FKEGVKTIQGRQEKLSVIRLGRSDAINTNVLDVTLDELVNA 1420
Query: 433 ------KRDDSAADKQK----HGA------------------------------------ 446
++D D QK H A
Sbjct: 1421 RLSQNPRKDGGERDLQKIYMEHKAADTAFKETRAKIDQCRAQGLPVPEELSREFDLMKKK 1480
Query: 447 ---------TRKDRD--SIRSAILNE----------AVIVCSTLSFSGSALLSKLNHGFD 485
T +DR+ + R A LN A I+C+TLS SG + L+ F+
Sbjct: 1481 KTQLSQEIDTARDRNHSAARDADLNRRRIQQEIIEGAHIICATLSGSGHEMFQNLSIEFE 1540
Query: 486 VVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRA 545
VIIDEAAQ++E + L+PL GC + LVGDP QLP TV+S VA Y SLF R+Q A
Sbjct: 1541 TVIIDEAAQSIELSALIPLKYGCSKCILVGDPKQLPPTVLSKVASKFQYEQSLFVRMQ-A 1599
Query: 546 GYP--VKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDI 603
+P V +L TQYRMHPE+ ++PS FYD L DG ++ R WH+ P+ FFD+
Sbjct: 1600 NHPRDVHLLDTQYRMHPEISAYPSAAFYDGKLRDGPNMAQLRARPWHQSELLSPYRFFDV 1659
Query: 604 HEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERF 663
+G S IN+ E+ + L+ ++ + + S ++ II+PY+ Q+++ + +F
Sbjct: 1660 -QGLHQNTTKGHSLINLAELRVAMQLYERITTDFRDYDFSGKIGIITPYKGQLRELKTQF 1718
Query: 664 KETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSS 723
+G VD T D QGRE ++ IFSCVRAS+ K IGFL+D RRMNVG+TRAKSS
Sbjct: 1719 AARYGNSIFNKVDFNTTDAFQGRESEIIIFSCVRASN-KGIGFLSDIRRMNVGLTRAKSS 1777
Query: 724 ILVVGCASTLREDKHWNNLVKSAEKQD 750
+ V+G + +L + + WN L+K + +++
Sbjct: 1778 LWVLGNSQSLVQGEFWNGLIKDSRRRN 1804
>gi|115386780|ref|XP_001209931.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114190929|gb|EAU32629.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 2086
Score = 312 bits (799), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 250/770 (32%), Positives = 381/770 (49%), Gaps = 87/770 (11%)
Query: 19 KIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKA 78
+ IL WD+F + G+ V +T++D +Y TFEPLL E
Sbjct: 1087 RTILAWDFFA----------NGDLPPNSGRTDYSLVSNTFRDPIEYQRTFEPLLILEAWQ 1136
Query: 79 QIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADEVE--SISPNDLLLLSKEEFKE 136
K+E + +++++ D F S +EV+ I D++LLSK
Sbjct: 1137 GFQSSKEEGSFKTFEIKVATRLS-VDSFVEVSTVMPFNEVKDLGIGEADIVLLSK----- 1190
Query: 137 GSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVK-SQRLLNIHSLITSSVSAVE 195
++ PT+ + A HC A + ++ K V+ S R+ +S I S
Sbjct: 1191 -ASSPTSNSSA--PHCLARV---------SGVNKKKGTVEISYRVNPGNSFINSLGPGTT 1238
Query: 196 KRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIKE 255
+F +I SL+ + REY AL ++ + I+ K+ S ++ GL + I E
Sbjct: 1239 --IFGSRITSLTPLEREYGALMALQYYDLCEEIV----KAKPSPILNYSDAGL--KPIVE 1290
Query: 256 NH--NASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLREI 313
N+ N +Q +AI L AF LIQGPPG+GKT+TI+ A++ A + V G+ I
Sbjct: 1291 NYKVNPAQAKAIKSALDNDAFTLIQGPPGSGKTKTIV----ALVGALLSGVLGNNGV-AI 1345
Query: 314 KRGPELPMHEKYNHWGRASPWLVGA--NPRDNIMPIDGDDGFFPTTGNELKPEVVNSSRR 371
R + + LV A N + + + +G G E K V+ R
Sbjct: 1346 SRPTTMSNARPQARTTTSKKLLVCAPSNAAVDELVMRFKNGVKTIQGREEKLSVIRLGRS 1405
Query: 372 YRVRVLVCAPSNSALDEIVLRLLN------TGIRD---------------ENIRSYTPKI 410
+ V + LDE+V ++ TG RD + R+ +
Sbjct: 1406 DAINTNVL---DVTLDELVNARMSQTSRKETGERDLQQIYTEHKAADTAFKETRARIDQC 1462
Query: 411 VRIGLKAHHSVNSVAIDHLVEQKRD-----DSAADKQKHGATRK---DRDSIRSAILNEA 462
GL + D L ++K D+A DK H A R +R I+ I++ A
Sbjct: 1463 RAQGLPVPAELER-EFDLLKKKKTQLSQEIDNARDKN-HSAARDADLNRRRIQQEIIDGA 1520
Query: 463 VIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPA 522
++C+TLS SG + L+ F+ VIIDEAAQ++E + L+PL GC + LVGDP QLP
Sbjct: 1521 HVICATLSGSGHEMFQNLSIEFETVIIDEAAQSIELSALIPLKYGCSKCILVGDPKQLPP 1580
Query: 523 TVISPVAEHLGYGTSLFKRLQRAGYP--VKMLKTQYRMHPEVRSFPSREFYDEALEDGSD 580
TV+S VA Y SLF R+Q A +P V +L QYRMHPE+ +FPS FYD L+DG D
Sbjct: 1581 TVLSKVASKFQYEQSLFVRMQ-ANHPRDVHLLDIQYRMHPEISAFPSSTFYDGKLQDGPD 1639
Query: 581 VEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQL 640
+ TR WH+ GP+ FFD+ +G A S IN+ E+ + L+ +L + + +
Sbjct: 1640 MARLRTRPWHQGELLGPYRFFDV-QGLHQSAAKGHSLINMAELRVAMQLYERLSTDFRGI 1698
Query: 641 KSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASD 700
+ ++ II+PY+ Q+++ + +F +G E +D T D QGRE +V IFSCVRAS+
Sbjct: 1699 DFAGKIGIITPYKGQLREMKNQFAARYGNEIFSKIDFNTTDAFQGRESEVIIFSCVRASN 1758
Query: 701 KKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQD 750
K IGFL+D RRMNVG+TRAKSS+ V+G + +L + + WN L+K A +++
Sbjct: 1759 -KGIGFLSDIRRMNVGLTRAKSSLWVLGNSQSLVQGEFWNGLIKDARRRN 1807
>gi|303318509|ref|XP_003069254.1| Zinc knuckle domain containing protein [Coccidioides posadasii C735
delta SOWgp]
gi|240108940|gb|EER27109.1| Zinc knuckle domain containing protein [Coccidioides posadasii C735
delta SOWgp]
Length = 2141
Score = 312 bits (799), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 243/803 (30%), Positives = 369/803 (45%), Gaps = 161/803 (20%)
Query: 19 KIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKA 78
K IL WD+F + G+ V +T+ + +Y TFEPLL E
Sbjct: 1089 KTILSWDFF----------ATGDLPPNCGRTDYTLVSNTFTNALEYQRTFEPLLILEAWQ 1138
Query: 79 QIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADEVE--SISPNDLLLLSKEEFKE 136
K++ + +++ + D F S + V+ + D++L+SK
Sbjct: 1139 GFQSAKEDGTFKPFEITVANRVS-VDNFVEVSTSMAPQTVKDLGLGEADMILISK----- 1192
Query: 137 GSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSAVEK 196
GS PTT + A HC A + L I + R+ ++ LI +
Sbjct: 1193 GSN-PTTDSKA--HHCLARVSGL--------IKKKGQMEITYRVNPMNPLINTISPGAS- 1240
Query: 197 RLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIKEN 256
L+ ++I SL+ + REY AL ++ D I+ A S ++ + H +
Sbjct: 1241 -LYGVRISSLTPLEREYGALMALKYYDLSDEIIRAKP----SPILNYSTESVKHILGTYD 1295
Query: 257 HNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLREIKRG 316
N +Q +A+ + AF LIQGPPG+GKT+TI+ L+ A+L
Sbjct: 1296 LNLAQAKAVKSAMDNDAFTLIQGPPGSGKTKTIVALVGALL------------------T 1337
Query: 317 PELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNSSRRYRVRV 376
P L H R +P P GD ++R ++
Sbjct: 1338 PTLSEH-------RIAP------------PRPGD----------------KTARTLAKKL 1362
Query: 377 LVCAPSNSALDEIVLRL------------------------LNTGIRDENI-RSYTPKIV 411
LVCAPSN+A+DE+V+R +NT + D + K+
Sbjct: 1363 LVCAPSNAAVDELVMRFKEGVKTLQGRAQKISVLRLGRSDAINTNVLDVTLDERVNAKLS 1422
Query: 412 RIGLK--AHHSVNSVAIDH---------------------------------LVEQKRD- 435
IG K + ++S+ +H L+++K+
Sbjct: 1423 EIGQKNGSERDLHSLYTEHKDSSNKFNEIRERMDQCRAKAQGLPAELEREFDLLKKKKAQ 1482
Query: 436 -----DSAADKQKHGATRKD--RDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVI 488
DSA DK + A + R I+ I++EA ++C+TLS SG + L+ F+ VI
Sbjct: 1483 LSQAIDSARDKSQAAARNAELTRRKIQQEIIDEAHVICATLSGSGHEMFQTLSIEFETVI 1542
Query: 489 IDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYP 548
IDEAAQ++E + L+PL GC + LVGDP QLP TV+S A Y SLF R+Q A +P
Sbjct: 1543 IDEAAQSIELSALIPLKYGCSKCILVGDPKQLPPTVLSKEASRFQYEQSLFVRMQ-ANHP 1601
Query: 549 --VKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEG 606
V +L TQYRMHPE+ FPS FYD L+DG + R WH GP+ FFD+
Sbjct: 1602 QDVHLLDTQYRMHPEISRFPSAAFYDGRLQDGPSMAKLRIRPWHSTELLGPYRFFDVQGM 1661
Query: 607 KESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKET 666
S P G S +N+ E+ + L+ +L+ +P + ++ II+PY+ Q+++ ++ F
Sbjct: 1662 HASAPKGH-SLVNMAELRVAMRLYDRLVQDFPTYDFAGKIGIITPYKGQLRELKQHFANK 1720
Query: 667 FGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILV 726
+G K V+ T D QGRE +V IFSCVRAS+ IGFLAD RRMNVG+TRAKSS+ V
Sbjct: 1721 YGNAIFKAVEFNTTDAFQGRECEVIIFSCVRASN-HGIGFLADIRRMNVGLTRAKSSLWV 1779
Query: 727 VGCASTLREDKHWNNLVKSAEKQ 749
+G + +L + W L+ A ++
Sbjct: 1780 LGNSQSLARGEFWRGLINDARER 1802
>gi|254568798|ref|XP_002491509.1| Presumed helicase required for RNA polymerase II transcription
termination and processing of RNAs [Komagataella pastoris
GS115]
gi|238031306|emb|CAY69229.1| Presumed helicase required for RNA polymerase II transcription
termination and processing of RNAs [Komagataella pastoris
GS115]
Length = 2146
Score = 311 bits (798), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 248/769 (32%), Positives = 373/769 (48%), Gaps = 77/769 (10%)
Query: 26 YFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKAQIIQKKD 85
Y ++++ S +R+ + D + + D+Y V+ Y TFEPLL E I Q K+
Sbjct: 1053 YAKVLQWSFKRDSRTPDNADLTTY--KAISDSYDSVEQYQNTFEPLLLLECWQGIQQAKE 1110
Query: 86 EEEVQEWKLRLVMECGEADGFHL-PSVTYEADEVESISPNDLLLLS--KEEFKEGSTFPT 142
+ Q + L + + + F + SV + I NDL++L+ + K
Sbjct: 1111 TGQDQPFNLVVGSKTTTGNFFDVYASVKKSVLQDRKIGDNDLVVLAYVPDGLKNMQGLDE 1170
Query: 143 TYAFALV---EHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSAVEKRLF 199
+ +V EH +R Y E + ++ NI +TS L
Sbjct: 1171 SVPRTVVKTSEHSCLGKVREIKYSNSEFCDV---TIRVHNRNNISPFLTS-----RSELT 1222
Query: 200 SLKICSLSTIAREYLALRSVGSLPFKDL---ILSASEKSSGSQDQSWKIPGLLHEYIKEN 256
LKI + TI REY +L+ LPF DL I+ A + D + L +K
Sbjct: 1223 GLKILQMVTIEREYSSLKG---LPFYDLSDKIVKAKSAEPFNIDDT----TLQETMVKFR 1275
Query: 257 HNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAIL------HATPARVHSKGGL 310
N SQ +AI F LIQGPPGTGKT+TILG++ +L H+TP + G +
Sbjct: 1276 VNKSQAQAIAGASTSSGFSLIQGPPGTGKTKTILGIVGKVLTTRNNLHSTPISI--PGAV 1333
Query: 311 REIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNSSR 370
R PE + R +N + + I +G +G KP+VV R
Sbjct: 1334 TSGPRKPETGV--------RKVLVCAPSNAAVDELVIRLREGVPGISGQMFKPKVV---R 1382
Query: 371 RYRVRVLVCAPSNSALDEIVLRLLNTGIR----DENIRSYTPKI------VRIGLKAHHS 420
R + A + L+E+V LN R D++IR K+ +R LK +
Sbjct: 1383 LGRSDAINSAVKDLTLEELVDAELNETARAPKADQSIREKHNKVLAERNSIREALKEVSN 1442
Query: 421 VNSVAIDHLVEQKRDDSAA--------DKQKH--GATRKDRDSIRSA----ILNEAVIVC 466
+ + L ++ + + A D+Q+ + ++R+ R A IL++A I+C
Sbjct: 1443 LKPEEVKDLQKRYSEITKAKNELGKKLDEQREEVSVSYRNREIQRRAVQFRILSQAQIIC 1502
Query: 467 STLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVIS 526
STLS S L+ ++ FD V+IDEA Q +E + ++PL GCK+ +VGDP QLP TV+S
Sbjct: 1503 STLSGSAHDFLATMDTSFDTVVIDEACQCIELSAIIPLRYGCKRCIMVGDPNQLPPTVLS 1562
Query: 527 PVAEHLGYGTSLFKRLQRAGYP--VKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDY 584
A Y SLF R+ +P V +L QYRMHP++ FPS+EFY+ L DG E
Sbjct: 1563 QAAAEYKYEQSLFVRMMNV-HPKSVYLLNVQYRMHPQISVFPSKEFYNGKLIDGEGTETK 1621
Query: 585 TTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSS 644
TR WH + P+ F D+ GKES + S N E V+ L L+ + +S
Sbjct: 1622 NTRSWH--KKIPPYCFIDV-TGKESTNTSNKSLFNRAEAQAVVSLIDALLGLDRDFNFAS 1678
Query: 645 QLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSI 704
++ +ISPY+ QV ++ FG +D+ TVDG QG+EKDV +FSCVRA + K +
Sbjct: 1679 KIGVISPYKQQVVLLRDMILRKFG--RNIGIDVNTVDGFQGQEKDVILFSCVRADETKGV 1736
Query: 705 GFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLF 753
GFLAD RR+NV +TRAKS++L+VG AS L W +LV+ ++ ++ F
Sbjct: 1737 GFLADVRRLNVALTRAKSTLLIVGHASNLSGHSLWRHLVQDSKDRNVFF 1785
>gi|451855806|gb|EMD69097.1| hypothetical protein COCSADRAFT_206223 [Cochliobolus sativus ND90Pr]
Length = 1974
Score = 311 bits (798), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 231/757 (30%), Positives = 367/757 (48%), Gaps = 69/757 (9%)
Query: 19 KIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKA 78
+ IL W+YF ++ + R +L +V +T++ +DY TFEPLL E
Sbjct: 1066 RTILSWNYF---------HEGDFPPKSRPEL-YSKVLNTFRTPNDYQNTFEPLLTLEAWQ 1115
Query: 79 QIIQKKDEEEVQEWKLRLVMECGEADGFHL--PSVTYEADEVESISPNDLLLLSKEEFKE 136
++ ++E + + +++R+ D F ++T+ + IS D++L S+ +
Sbjct: 1116 GFVKAREENQARPYEIRITSRAA-VDMFQEIGSTMTHVENREVFISEGDIILFSQSK-NP 1173
Query: 137 GSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSAVEK 196
+ PT C A + R++ + I ++ V L +S
Sbjct: 1174 SAEEPT---------CLARVFRVKR--KQQHIEVSYRVVPGNPL--------NSALQPNN 1214
Query: 197 RLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIKEN 256
L K+ S++ + REY AL+ + D I+ A + S +I L+ Y N
Sbjct: 1215 TLLGTKLQSITPLEREYGALKGLQYYDLCDEIIRAKPSPLLTYKDS-QIQPLISNY---N 1270
Query: 257 HNASQLEAIHEGLLRKAFVLIQGPPGTGK----TQTILGLLSAILHATPARVHSKGGLRE 312
N +Q +AI + AF LIQGPPG+GK T + +LS L + G R
Sbjct: 1271 VNTAQAKAIKSAIDNDAFTLIQGPPGSGKTKTITAIVGAILSDSLRNRGTTISVPGQQRS 1330
Query: 313 IKRGPEL--------PMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPE 364
+L + E + L G + + NI+ + D + + E
Sbjct: 1331 EAASKKLLVCAPSNAAVDELVMRFKDGIKTLNGESRKVNIVRLGRGDAIKASVQDVTLEE 1390
Query: 365 VVNSSRRYRVRVLVCAPSNSALDEIVLRLL--NTGIRDENIRSYTPKIV-----RIGLKA 417
+VN L PS+S E +L + I D+ ++Y + K
Sbjct: 1391 LVNQR-------LGVDPSDSKDKEATQKLFQDHKKISDQLKQAYQQRDSGEVKGDAAAKL 1443
Query: 418 HHSVNSVAIDHLVEQKRDDSAADKQKHGATRKD--RDSIRSAILNEAVIVCSTLSFSGSA 475
+N++ + D+ D +K + D R + A+LNEA ++C+TLS SG
Sbjct: 1444 EEDINALRRQKTALGTKIDNVKDDEKLASRNADLNRRRAQEAVLNEAHVICATLSGSGHE 1503
Query: 476 LLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYG 535
+ L+ F+ VI+DEAAQ VE + L+PL GC + LVGDP QLP TV S A Y
Sbjct: 1504 MFQGLSIEFETVIVDEAAQCVEMSALIPLKYGCAKCILVGDPKQLPPTVFSKEAARFQYE 1563
Query: 536 TSLFKRLQRAGYP--VKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYR 593
SLF R+Q+ +P V +L TQYRMHPE+ FPS+ FYD L DG D+ + WH+
Sbjct: 1564 QSLFVRMQK-NHPNDVHLLDTQYRMHPEISLFPSQTFYDSRLLDGGDMAGLRKQPWHQSM 1622
Query: 594 CFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYR 653
GP+ FFD+ + + P G S IN+ E+ + L+ +L S YP ++ II+PY+
Sbjct: 1623 VLGPYRFFDVKGQQAAAPKGH-SLINVAEIKVAMQLYKRLTSDYPDYDFKGKVGIITPYK 1681
Query: 654 HQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRM 713
Q+++ ++ F + +G + +D T D QGRE +V IFSCVRAS IGFL D RRM
Sbjct: 1682 SQLRELKQSFMQVYGQSIIEDIDFNTTDAFQGRESEVIIFSCVRASPAGGIGFLQDIRRM 1741
Query: 714 NVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQD 750
NVG+TRAKSS+ V+G + +L+ ++WN L+ +A++++
Sbjct: 1742 NVGLTRAKSSLWVLGNSESLQRGQYWNKLIVNAKERN 1778
>gi|392864810|gb|EAS30536.2| tRNA-splicing endonuclease [Coccidioides immitis RS]
Length = 2141
Score = 311 bits (798), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 243/803 (30%), Positives = 368/803 (45%), Gaps = 161/803 (20%)
Query: 19 KIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKA 78
K IL WD+F + G+ V +T+ + +Y TFEPLL E
Sbjct: 1089 KTILSWDFF----------ATGDLPPNCGRTDYTLVSNTFTNALEYQRTFEPLLILEAWQ 1138
Query: 79 QIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADEVE--SISPNDLLLLSKEEFKE 136
K++ + +++ + D F S + V+ + D++L+SK
Sbjct: 1139 GFQSAKEDGTFKPFEITVANRVS-VDNFVEVSTSMAPQTVKDLGLGEADMILISK----- 1192
Query: 137 GSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSAVEK 196
GS PTT + A HC A + L I + R+ ++ LI +
Sbjct: 1193 GSN-PTTDSKA--HHCLARVSGL--------IKKKGQMEITYRVNPMNPLINTISPGAS- 1240
Query: 197 RLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIKEN 256
L+ ++I SL+ + REY AL ++ D I+ A S ++ + H +
Sbjct: 1241 -LYGVRISSLTPLEREYGALMALKYYDLSDEIIRAKP----SPILNYSTESVKHILGTYD 1295
Query: 257 HNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLREIKRG 316
N +Q +A+ + AF LIQGPPG+GKT+TI+ L+ A+L
Sbjct: 1296 LNLAQAKAVKSAMDNDAFTLIQGPPGSGKTKTIVALVGALL------------------T 1337
Query: 317 PELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNSSRRYRVRV 376
P L H R +P P GD ++R ++
Sbjct: 1338 PTLSEH-------RIAP------------PRPGD----------------KTARTLAKKL 1362
Query: 377 LVCAPSNSALDEIVLRL------------------------LNTGIRDENI-RSYTPKIV 411
LVCAPSN+A+DE+V+R +NT + D + K+
Sbjct: 1363 LVCAPSNAAVDELVMRFKEGVKTLQGRAQKISVLRLGRSDAINTNVLDVTLDERVNAKLS 1422
Query: 412 RIGLK--AHHSVNSVAIDH---------------------------------LVEQKRD- 435
IG K + + S+ +H L+++K+
Sbjct: 1423 EIGQKNGSERDLQSLYTEHKDTSNKFNEIRERMDQCRAKAQALPAELEREFDLLKKKKAQ 1482
Query: 436 -----DSAADKQKHGATRKD--RDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVI 488
DSA DK + A + R I+ I++EA ++C+TLS SG + L+ F+ VI
Sbjct: 1483 LSQAIDSARDKNQAAARNAELTRRKIQQEIIDEAHVICATLSGSGHEMFQTLSIEFETVI 1542
Query: 489 IDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYP 548
IDEAAQ++E + L+PL GC + LVGDP QLP TV+S A Y SLF R+Q A +P
Sbjct: 1543 IDEAAQSIELSALIPLKYGCSKCILVGDPKQLPPTVLSKEASRFQYEQSLFVRMQ-ANHP 1601
Query: 549 --VKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEG 606
V +L TQYRMHPE+ FPS FYD L+DG + R WH GP+ FFD+
Sbjct: 1602 QDVHLLDTQYRMHPEISRFPSAAFYDGRLQDGPAMAKLRIRPWHNTELLGPYRFFDVQGM 1661
Query: 607 KESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKET 666
S P G S +N+ E+ + L+ +L+ +P + ++ II+PY+ Q+++ ++ F
Sbjct: 1662 HASAPKGH-SLVNMAELRVAMRLYDRLVQDFPTYDFAGKIGIITPYKGQLRELKQHFANK 1720
Query: 667 FGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILV 726
+G K V+ T D QGRE +V IFSCVRAS+ IGFLAD RRMNVG+TRAKSS+ V
Sbjct: 1721 YGNAIFKAVEFNTTDAFQGRECEVIIFSCVRASN-HGIGFLADIRRMNVGLTRAKSSLWV 1779
Query: 727 VGCASTLREDKHWNNLVKSAEKQ 749
+G + +L + W L+ A ++
Sbjct: 1780 LGNSQSLARGEFWRGLINDARER 1802
>gi|328351981|emb|CCA38380.1| hypothetical protein PP7435_Chr2-0694 [Komagataella pastoris CBS
7435]
Length = 2154
Score = 311 bits (798), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 248/769 (32%), Positives = 373/769 (48%), Gaps = 77/769 (10%)
Query: 26 YFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKAQIIQKKD 85
Y ++++ S +R+ + D + + D+Y V+ Y TFEPLL E I Q K+
Sbjct: 1053 YAKVLQWSFKRDSRTPDNADLTTY--KAISDSYDSVEQYQNTFEPLLLLECWQGIQQAKE 1110
Query: 86 EEEVQEWKLRLVMECGEADGFHL-PSVTYEADEVESISPNDLLLLS--KEEFKEGSTFPT 142
+ Q + L + + + F + SV + I NDL++L+ + K
Sbjct: 1111 TGQDQPFNLVVGSKTTTGNFFDVYASVKKSVLQDRKIGDNDLVVLAYVPDGLKNMQGLDE 1170
Query: 143 TYAFALV---EHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSAVEKRLF 199
+ +V EH +R Y E + ++ NI +TS L
Sbjct: 1171 SVPRTVVKTSEHSCLGKVREIKYSNSEFCDV---TIRVHNRNNISPFLTS-----RSELT 1222
Query: 200 SLKICSLSTIAREYLALRSVGSLPFKDL---ILSASEKSSGSQDQSWKIPGLLHEYIKEN 256
LKI + TI REY +L+ LPF DL I+ A + D + L +K
Sbjct: 1223 GLKILQMVTIEREYSSLKG---LPFYDLSDKIVKAKSAEPFNIDDT----TLQETMVKFR 1275
Query: 257 HNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAIL------HATPARVHSKGGL 310
N SQ +AI F LIQGPPGTGKT+TILG++ +L H+TP + G +
Sbjct: 1276 VNKSQAQAIAGASTSSGFSLIQGPPGTGKTKTILGIVGKVLTTRNNLHSTPISI--PGAV 1333
Query: 311 REIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNSSR 370
R PE + R +N + + I +G +G KP+VV R
Sbjct: 1334 TSGPRKPETGV--------RKVLVCAPSNAAVDELVIRLREGVPGISGQMFKPKVV---R 1382
Query: 371 RYRVRVLVCAPSNSALDEIVLRLLNTGIR----DENIRSYTPKI------VRIGLKAHHS 420
R + A + L+E+V LN R D++IR K+ +R LK +
Sbjct: 1383 LGRSDAINSAVKDLTLEELVDAELNETARAPKADQSIREKHNKVLAERNSIREALKEVSN 1442
Query: 421 VNSVAIDHLVEQKRDDSAA--------DKQKH--GATRKDRDSIRSA----ILNEAVIVC 466
+ + L ++ + + A D+Q+ + ++R+ R A IL++A I+C
Sbjct: 1443 LKPEEVKDLQKRYSEITKAKNELGKKLDEQREEVSVSYRNREIQRRAVQFRILSQAQIIC 1502
Query: 467 STLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVIS 526
STLS S L+ ++ FD V+IDEA Q +E + ++PL GCK+ +VGDP QLP TV+S
Sbjct: 1503 STLSGSAHDFLATMDTSFDTVVIDEACQCIELSAIIPLRYGCKRCIMVGDPNQLPPTVLS 1562
Query: 527 PVAEHLGYGTSLFKRLQRAGYP--VKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDY 584
A Y SLF R+ +P V +L QYRMHP++ FPS+EFY+ L DG E
Sbjct: 1563 QAAAEYKYEQSLFVRMMNV-HPKSVYLLNVQYRMHPQISVFPSKEFYNGKLIDGEGTETK 1621
Query: 585 TTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSS 644
TR WH + P+ F D+ GKES + S N E V+ L L+ + +S
Sbjct: 1622 NTRSWH--KKIPPYCFIDV-TGKESTNTSNKSLFNRAEAQAVVSLIDALLGLDRDFNFAS 1678
Query: 645 QLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSI 704
++ +ISPY+ QV ++ FG +D+ TVDG QG+EKDV +FSCVRA + K +
Sbjct: 1679 KIGVISPYKQQVVLLRDMILRKFG--RNIGIDVNTVDGFQGQEKDVILFSCVRADETKGV 1736
Query: 705 GFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLF 753
GFLAD RR+NV +TRAKS++L+VG AS L W +LV+ ++ ++ F
Sbjct: 1737 GFLADVRRLNVALTRAKSTLLIVGHASNLSGHSLWRHLVQDSKDRNVFF 1785
>gi|320036907|gb|EFW18845.1| tRNA-splicing endonuclease [Coccidioides posadasii str. Silveira]
Length = 1086
Score = 311 bits (797), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 244/803 (30%), Positives = 369/803 (45%), Gaps = 161/803 (20%)
Query: 19 KIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKA 78
K IL WD+F + G+ V +T+ + +Y TFEPLL E
Sbjct: 34 KTILSWDFF----------ATGDLPPNCGRTDYTLVSNTFTNALEYQRTFEPLLILEAWQ 83
Query: 79 QIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADEVE--SISPNDLLLLSKEEFKE 136
K++ + +++ + D F S + V+ + D++L+SK
Sbjct: 84 GFQSAKEDGTFKPFEITVANRV-SVDNFVEVSTSMAPQTVKDLGLGEADMILISK----- 137
Query: 137 GSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSAVEK 196
GS PTT + A HC A + L I + R+ ++ LI +
Sbjct: 138 GSN-PTTDSKA--HHCLARVSGL--------IKKKGQMEITYRVNPMNPLINTISPGAS- 185
Query: 197 RLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIKEN 256
L+ ++I SL+ + REY AL ++ D I+ A S ++ + H +
Sbjct: 186 -LYGVRISSLTPLEREYGALMALKYYDLSDEIIRAKP----SPILNYSTESVKHILGTYD 240
Query: 257 HNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLREIKRG 316
N +Q +A+ + AF LIQGPPG+GKT+TI+ L+ A+L T L E +
Sbjct: 241 LNLAQAKAVKSAMDNDAFTLIQGPPGSGKTKTIVALVGALLTPT---------LSEHRIA 291
Query: 317 PELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNSSRRYRVRV 376
P P GD ++R ++
Sbjct: 292 PPRP----------------------------GD----------------KTARTLAKKL 307
Query: 377 LVCAPSNSALDEIV-------------------LRL-----LNTGIRDENI-RSYTPKIV 411
LVCAPSN+A+DE+V LRL +NT + D + K+
Sbjct: 308 LVCAPSNAAVDELVMRFKEGVKTLQGRAQKISVLRLGRSDAINTNVLDVTLDERVNAKLS 367
Query: 412 RIGLK--AHHSVNSVAIDH---------------------------------LVEQKRD- 435
IG K + ++S+ +H L+++K+
Sbjct: 368 EIGQKNGSERDLHSLYTEHKDSSNKFNEIRERMDQCRAKAQGLPAELEREFDLLKKKKAQ 427
Query: 436 -----DSAADKQKHGATRKD--RDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVI 488
DSA DK + A + R I+ I++EA ++C+TLS SG + L+ F+ VI
Sbjct: 428 LSQAIDSARDKSQAAARNAELTRRKIQQEIIDEAHVICATLSGSGHEMFQTLSIEFETVI 487
Query: 489 IDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYP 548
IDEAAQ++E + L+PL GC + LVGDP QLP TV+S A Y SLF R+Q A +P
Sbjct: 488 IDEAAQSIELSALIPLKYGCSKCILVGDPKQLPPTVLSKEASRFQYEQSLFVRMQ-ANHP 546
Query: 549 --VKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEG 606
V +L TQYRMHPE+ FPS FYD L+DG + R WH GP+ FFD+
Sbjct: 547 QDVHLLDTQYRMHPEISRFPSAAFYDGRLQDGPSMAKLRIRPWHSTELLGPYRFFDVQGM 606
Query: 607 KESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKET 666
S P G S +N+ E+ + L+ +L+ +P + ++ II+PY+ Q+++ ++ F
Sbjct: 607 HASAPKGH-SLVNMAELRVAMRLYDRLVQDFPTYDFAGKIGIITPYKGQLRELKQHFANK 665
Query: 667 FGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILV 726
+G K V+ T D QGRE +V IFSCVRAS+ IGFLAD RRMNVG+TRAKSS+ V
Sbjct: 666 YGNAIFKAVEFNTTDAFQGRECEVIIFSCVRASN-HGIGFLADIRRMNVGLTRAKSSLWV 724
Query: 727 VGCASTLREDKHWNNLVKSAEKQ 749
+G + +L + W L+ A ++
Sbjct: 725 LGNSQSLARGEFWRGLINDARER 747
>gi|302921016|ref|XP_003053198.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256734138|gb|EEU47485.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 2035
Score = 311 bits (797), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 244/773 (31%), Positives = 372/773 (48%), Gaps = 83/773 (10%)
Query: 16 RFCKIILGWDYFRLVKESQERNDK-NSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFE 74
R IL WD F ND N K EV Y + Y TF PLL
Sbjct: 1105 RLHNTILAWDIF------HAGNDPPNGPKAS-------EVATKYSNPRSYQDTFFPLLAS 1151
Query: 75 EVKAQIIQKKDEEEVQEWKLRLVMECG-----EADGFHLPSVTYEADEVESISPNDLLLL 129
E + KDE Q + +++ EA F +P V ++ +S D+LL+
Sbjct: 1152 EAWRSFVTSKDELTAQPFGMKIASRASVDSYLEAT-FTMPVVQ---NKDRGVSEGDILLV 1207
Query: 130 SKEEFKEGSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITS 189
S+ E P T A HC A + R+ E+I + + R + ++T
Sbjct: 1208 SEAEN------PLTEKTA--RHCLARVHRI--TYKKEMIEVTYRV--ASRNNPMTQVLTP 1255
Query: 190 SVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLL 249
+VS ++ +KI +++TI REY AL S+ D IL+A E S + K+ +
Sbjct: 1256 NVS-----VYGVKITNMTTIEREYAALESLQYYDLMDEILNA-EPSPILRYGEEKVSSCM 1309
Query: 250 HEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGG 309
+ A + H+ F LIQGPPGTGKT+TI+ ++ +L +++++ G
Sbjct: 1310 DNFSLNRGQAMAVLGAHDN---DGFTLIQGPPGTGKTKTIVAMVGTLLSEQLSQMNNTGV 1366
Query: 310 LREIKRGPELPMHEKYNHWGRASPWLVGA--NPRDNIMPIDGDDGFFPTTGNELKPEVVN 367
+ P N+ R+ LV A N + + + G T+G K +N
Sbjct: 1367 PVGVPLRPN--GAPAANNQARSKKLLVCAPSNAAVDELVLRLKSGIKTTSG---KTRNIN 1421
Query: 368 SSRRYRVRVLVCAPSNSALDEIV-LRLLNTGIRD------ENIRSYTPKI------VRIG 414
R R + A + LDE+V RL G +D + + KI +R
Sbjct: 1422 VIRLGRSDAINAAVKDVTLDELVKARLEGDGTKDKAKADRDKLHEDAGKIKEELSLLRPR 1481
Query: 415 LKAHHSVNSVAIDHLV-----EQKRDDSA------ADKQKHGATRKD----RDSIRSAIL 459
L+A + + + + E KR + ADK + ++ R ++ IL
Sbjct: 1482 LEASRDGDDRGLYNRLSREFEELKRRQMSIGKQIDADKSSGNSVAREMELRRRQVQQEIL 1541
Query: 460 NEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQ 519
N A ++C+TLS SG + L+ F+ VIIDEAAQ VE + L+PL GC + LVGDP Q
Sbjct: 1542 NSAQVLCATLSGSGHEMFRNLDVEFETVIIDEAAQCVELSALIPLKYGCCKCILVGDPKQ 1601
Query: 520 LPATVISPVAEHLGYGTSLFKRLQRAGYP--VKMLKTQYRMHPEVRSFPSREFYDEALED 577
LP TV+S A GY SLF R+Q+ +P V +L QYRMHPE+ FPSREFY+ L D
Sbjct: 1602 LPPTVLSQSAAKFGYDQSLFVRMQQ-NHPKSVHLLDMQYRMHPEISMFPSREFYEGQLAD 1660
Query: 578 GSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMY 637
G ++ + + WH+ GP+ FFD+ +E G S +N E+D + L+ + Y
Sbjct: 1661 GQNMHELRQQPWHKSALLGPYRFFDVQGVQERGHRGQ-SLVNTKELDVAMQLYDRFSKEY 1719
Query: 638 PQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVR 697
Q + ++ II+PY+ Q+ + + RF+ +G +++ T D QGRE ++ IFSCVR
Sbjct: 1720 QQCDLTGKIGIITPYKAQLYELRNRFRSRYGEAITNIIEFNTTDAFQGRECEIIIFSCVR 1779
Query: 698 ASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQD 750
AS IGF+ D RRMNVG+TRAKSS+ ++G + L + + W L++ A+ +D
Sbjct: 1780 ASSTGGIGFMTDIRRMNVGLTRAKSSLWILGDSRALVQGEFWRKLIEDAQARD 1832
>gi|119181373|ref|XP_001241901.1| hypothetical protein CIMG_05797 [Coccidioides immitis RS]
Length = 2066
Score = 311 bits (796), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 243/803 (30%), Positives = 368/803 (45%), Gaps = 161/803 (20%)
Query: 19 KIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKA 78
K IL WD+F + G+ V +T+ + +Y TFEPLL E
Sbjct: 1014 KTILSWDFF----------ATGDLPPNCGRTDYTLVSNTFTNALEYQRTFEPLLILEAWQ 1063
Query: 79 QIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADEVE--SISPNDLLLLSKEEFKE 136
K++ + +++ + D F S + V+ + D++L+SK
Sbjct: 1064 GFQSAKEDGTFKPFEITVANRVS-VDNFVEVSTSMAPQTVKDLGLGEADMILISK----- 1117
Query: 137 GSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSAVEK 196
GS PTT + A HC A + L I + R+ ++ LI +
Sbjct: 1118 GSN-PTTDSKA--HHCLARVSGL--------IKKKGQMEITYRVNPMNPLINTISPGAS- 1165
Query: 197 RLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIKEN 256
L+ ++I SL+ + REY AL ++ D I+ A S ++ + H +
Sbjct: 1166 -LYGVRISSLTPLEREYGALMALKYYDLSDEIIRAKP----SPILNYSTESVKHILGTYD 1220
Query: 257 HNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLREIKRG 316
N +Q +A+ + AF LIQGPPG+GKT+TI+ L+ A+L
Sbjct: 1221 LNLAQAKAVKSAMDNDAFTLIQGPPGSGKTKTIVALVGALL------------------T 1262
Query: 317 PELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNSSRRYRVRV 376
P L H R +P P GD ++R ++
Sbjct: 1263 PTLSEH-------RIAP------------PRPGD----------------KTARTLAKKL 1287
Query: 377 LVCAPSNSALDEIVLRL------------------------LNTGIRDENI-RSYTPKIV 411
LVCAPSN+A+DE+V+R +NT + D + K+
Sbjct: 1288 LVCAPSNAAVDELVMRFKEGVKTLQGRAQKISVLRLGRSDAINTNVLDVTLDERVNAKLS 1347
Query: 412 RIGLK--AHHSVNSVAIDH---------------------------------LVEQKRD- 435
IG K + + S+ +H L+++K+
Sbjct: 1348 EIGQKNGSERDLQSLYTEHKDTSNKFNEIRERMDQCRAKAQALPAELEREFDLLKKKKAQ 1407
Query: 436 -----DSAADKQKHGATRKD--RDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVI 488
DSA DK + A + R I+ I++EA ++C+TLS SG + L+ F+ VI
Sbjct: 1408 LSQAIDSARDKNQAAARNAELTRRKIQQEIIDEAHVICATLSGSGHEMFQTLSIEFETVI 1467
Query: 489 IDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYP 548
IDEAAQ++E + L+PL GC + LVGDP QLP TV+S A Y SLF R+Q A +P
Sbjct: 1468 IDEAAQSIELSALIPLKYGCSKCILVGDPKQLPPTVLSKEASRFQYEQSLFVRMQ-ANHP 1526
Query: 549 --VKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEG 606
V +L TQYRMHPE+ FPS FYD L+DG + R WH GP+ FFD+
Sbjct: 1527 QDVHLLDTQYRMHPEISRFPSAAFYDGRLQDGPAMAKLRIRPWHNTELLGPYRFFDVQGM 1586
Query: 607 KESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKET 666
S P G S +N+ E+ + L+ +L+ +P + ++ II+PY+ Q+++ ++ F
Sbjct: 1587 HASAPKGH-SLVNMAELRVAMRLYDRLVQDFPTYDFAGKIGIITPYKGQLRELKQHFANK 1645
Query: 667 FGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILV 726
+G K V+ T D QGRE +V IFSCVRAS+ IGFLAD RRMNVG+TRAKSS+ V
Sbjct: 1646 YGNAIFKAVEFNTTDAFQGRECEVIIFSCVRASN-HGIGFLADIRRMNVGLTRAKSSLWV 1704
Query: 727 VGCASTLREDKHWNNLVKSAEKQ 749
+G + +L + W L+ A ++
Sbjct: 1705 LGNSQSLARGEFWRGLINDARER 1727
>gi|297735762|emb|CBI18449.3| unnamed protein product [Vitis vinifera]
Length = 2154
Score = 310 bits (795), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 257/814 (31%), Positives = 376/814 (46%), Gaps = 182/814 (22%)
Query: 21 ILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKAQI 80
IL DYF V + D+ S+ V++ L+EV ++ D Y+ F PL+ EE KAQ+
Sbjct: 1249 ILEIDYFVTVGLASASKDE-SQTVNK----LKEVPMCFESPDQYVDIFRPLVLEEFKAQL 1303
Query: 81 IQKKDEEEVQEWKLRLVMECGEA--------DGFHLPSVTYEADE---VESISPNDLLLL 129
E E M CG A D FHL ++ + + S NDL+LL
Sbjct: 1304 HSSFLEMSSSEG-----MCCGSASVLSVERIDDFHLVRCVHDGSDSAAYRTFSENDLVLL 1358
Query: 130 SKEEFKEGSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITS 189
+++ + S +++ G+V KD+ +L I + +
Sbjct: 1359 TRQPLQNSSH--------------------EVHMVGKVERREKDSKSRSNVLVIRFYLQN 1398
Query: 190 SVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLL 249
S + + AR+ L RS W L
Sbjct: 1399 GSSRLNR-------------ARKLLIERS-----------------------KWY---LS 1419
Query: 250 HEYIKENHNASQLEAIHEGLL----RKAF--VLIQGPPGTGKTQTILGLLSAILHATPAR 303
++ ++N+SQL+AI + +K F LIQGPPGTGKT+TI+ ++S +L
Sbjct: 1420 RRILESSYNSSQLQAISVAIASPDSKKNFDLSLIQGPPGTGKTRTIVAIVSGLL------ 1473
Query: 304 VHSKGGLREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKP 363
ASP L G N +++ +DG P +
Sbjct: 1474 ---------------------------ASP-LKGVNMKNS---VDGKQSLKPMGTS---- 1498
Query: 364 EVVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIG--LKAHHSV 421
R RVL+CA SN+A+DE+V R+ + G+ + Y P +VR+G H +
Sbjct: 1499 --------VRQRVLICAQSNAAVDELVSRISSEGLYSSDGNMYKPYLVRVGNVKTVHQNS 1550
Query: 422 NSVAIDHLVEQKR--DDSAADKQKHGATRKDRDSIRSAILNE---AVIVCSTLSFSGSAL 476
ID LV+Q+ + + K R+ +R + + IV +TLS G L
Sbjct: 1551 LPFFIDTLVDQRLLVERIRLYEAKRANLREIEVKLRRLYEQKKEISEIVVATLSGCGGDL 1610
Query: 477 L--------------SKLNHGFDVVIIDEAAQAVEPATLVP---LATGCKQVFLVGDPVQ 519
S NH FD V+IDEAAQA+EPATL+P L + + +VGDP Q
Sbjct: 1611 YGVCSESISTHKFGRSSENHLFDAVVIDEAAQALEPATLIPLQLLKSSGTRCIMVGDPKQ 1670
Query: 520 LPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGS 579
LPATV+S VA Y S+F+RLQRAGYPV ML QYRMHPE+ FPS FYD L +G
Sbjct: 1671 LPATVLSSVASKFRYQCSMFERLQRAGYPVTMLTKQYRMHPEICRFPSLHFYDSKLLNGE 1730
Query: 580 DVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSW--INIDEVDF---VLLLFHKLI 634
++ +HE GP+ FFD+ +G+ES SG++ N E D VL LF K
Sbjct: 1731 NMSSKLA-PFHETEGLGPYVFFDVVDGQESHGRNSGTFSLCNEREADAAVEVLRLFRK-- 1787
Query: 635 SMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFS 694
+P ++ II+PY+ Q+ + RF FG ++ TVDG QGRE D+ + S
Sbjct: 1788 -RHPSEFVGGRIGIITPYKCQLSLLRSRFSSAFGSSITSDMEFNTVDGFQGREVDILVLS 1846
Query: 695 CVRAS---------DKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKS 745
VRA+ + SIGF+AD RRMNV +TRAK S+ ++G A TL+ + +W LVK
Sbjct: 1847 TVRAAGPCSAASGINSSSIGFVADVRRMNVALTRAKLSLWILGNARTLQTNCNWAALVKD 1906
Query: 746 AEKQDCLFRVSKPYASFFSDENLESMRKNATTDN 779
A++++ + PY S F + KN +++N
Sbjct: 1907 AKERNLVISAKMPYQSMF-----KKALKNPSSEN 1935
>gi|330917057|ref|XP_003297659.1| hypothetical protein PTT_08146 [Pyrenophora teres f. teres 0-1]
gi|330935060|ref|XP_003304815.1| hypothetical protein PTT_17500 [Pyrenophora teres f. teres 0-1]
gi|311318413|gb|EFQ87087.1| hypothetical protein PTT_17500 [Pyrenophora teres f. teres 0-1]
gi|311329531|gb|EFQ94249.1| hypothetical protein PTT_08146 [Pyrenophora teres f. teres 0-1]
Length = 1967
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 237/767 (30%), Positives = 362/767 (47%), Gaps = 97/767 (12%)
Query: 21 ILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKAQI 80
ILGW+YF + K SK G V T+ DY TFE LL E
Sbjct: 1071 ILGWNYFY----DGDFPPKTSKGDYSG------VISTFHTPVDYQRTFERLLILEAWQSF 1120
Query: 81 IQKKDEEEVQEWKLRLVMECGEADGFHLPSVT--YEADEVESISPNDLLLLSKEEFKEGS 138
I+ +DE + +++++ + D F T Y + D++LLS+ K +
Sbjct: 1121 IKMRDEPLAKPYEIQISSQA-RVDQFSEVGTTLKYSVSKEMPFFEGDIILLSQS--KPSA 1177
Query: 139 TFPTTYA-FALVEHCQANL-LRLRMYLAGE---VIHINKDAVKSQRLLNIHSLITSSVSA 193
P A + V+ +A+ + R+ G+ V H N
Sbjct: 1178 DEPACLARVSNVKRTKAHFEITYRLMPGGQLQNVFHKNNT-------------------- 1217
Query: 194 VEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYI 253
L + KI S++++ RE+ AL+ + D I+ A + S +I L+ Y
Sbjct: 1218 ----LLATKIDSITSLEREFAALKGLQYYDLCDEIIKAKPSPLLTYKDS-QIQPLISNY- 1271
Query: 254 KENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLREI 313
N N +Q +AI + F LIQGPPG+GKT+TI ++ AIL G R
Sbjct: 1272 --NVNMAQGKAIKSAIDNDGFTLIQGPPGSGKTKTITAIVGAIL---------SGSFRNR 1320
Query: 314 KRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNSSRRYR 373
+P + + + +N + + + G G E + +V R
Sbjct: 1321 GTNIAVPGQPQSDAAPKKILVCAPSNAAVDELCMRFRQGIKTLNGEERQISIVRLGRSEA 1380
Query: 374 VRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVA-------- 425
V+ + + LDE+V + L R + + + R + + H S
Sbjct: 1381 VKASI---QDLTLDELVDKRLGAEKRSDADSNGNEQEARQKVFSEHQETSKQLREAYDLR 1437
Query: 426 ----------------IDHLVEQKRD-----DSAADKQKHGATRKD--RDSIRSAILNEA 462
I L +K++ D+ D Q + D RD +AILN+A
Sbjct: 1438 NKGEVKGEAAAKLDNDISALYRKKKELSGQIDAIKDNQAATGRKADARRDKAIAAILNDA 1497
Query: 463 VIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPA 522
+VCSTLS SG + + FD VI+DEAAQ VE + L+PL GC + LVGDP QLP
Sbjct: 1498 HVVCSTLSGSGHNMFRTIEVEFDTVIVDEAAQCVEMSALIPLKYGCAKCILVGDPKQLPP 1557
Query: 523 TVISPVAEHLGYGTSLFKRLQRAGYP--VKMLKTQYRMHPEVRSFPSREFYDEALEDGSD 580
T+ S A Y SLF R+Q+ +P V +L TQYRMHPE+ FPS+ FYD L DG D
Sbjct: 1558 TIFSKEAARFRYAQSLFMRMQQ-NHPNDVHLLDTQYRMHPEISLFPSQTFYDGKLLDGGD 1616
Query: 581 VEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQL 640
+ + WH+ GP+ FFD+ ++ P+G S +NI E++ L L+++L S YP
Sbjct: 1617 MASLRKQPWHQSSLLGPYRFFDVKGQQQKAPSGK-SLMNIAEINVALQLYNRLTSDYPDY 1675
Query: 641 KSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASD 700
++ II+PY+ Q+++ ++RF + +G + +D T D QGRE ++ IFSCVRA+
Sbjct: 1676 NFKGKIGIITPYKSQLQEIKQRFMKAYGQTIIEDIDFNTTDAFQGRESEIIIFSCVRANG 1735
Query: 701 KKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAE 747
IGFL D RRMNVG+TRAKSS+ V+G +++L+ + WN L+ +A+
Sbjct: 1736 --GIGFLDDVRRMNVGLTRAKSSLWVLGNSASLQSGEFWNKLIVNAQ 1780
>gi|398398643|ref|XP_003852779.1| hypothetical protein MYCGRDRAFT_41426, partial [Zymoseptoria tritici
IPO323]
gi|339472660|gb|EGP87755.1| hypothetical protein MYCGRDRAFT_41426 [Zymoseptoria tritici IPO323]
Length = 1778
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 233/773 (30%), Positives = 376/773 (48%), Gaps = 85/773 (10%)
Query: 19 KIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKA 78
++ILGWDYF N +V D++ D Y TFEPLL E
Sbjct: 1046 RMILGWDYFHQGDYPPGSNPHE----------FSQVSDSFSDPVTYQQTFEPLLLLEAWQ 1095
Query: 79 QIIQKKDEEEVQEWKLRLVMECGEADGF-HLPSVTYEADEVE-SISPNDLLLLSKEEFKE 136
++Q + ++ + ++++ V D F + SV + + + I D++L SK
Sbjct: 1096 GLVQSRLQDNSKPYEIK-VGNRNNVDQFVEINSVLGQKENRDLQIMEGDIILFSKSPRPA 1154
Query: 137 G-STFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSAVE 195
G ST P +C A + R++ K ++ S + S ++ +
Sbjct: 1155 GDSTTP---------NCLARVYRIKR---------EKGQLQVVYQFTPGSSLASQITP-Q 1195
Query: 196 KRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSA--SEKSSGSQDQSWKIPGLLHEYI 253
+ +K+ S++ + REY AL+++ + I+ A S++ S+ Q I Y
Sbjct: 1196 TIIHGVKVQSITPLEREYGALKALQYYDLCNQIVRARPSQRIEYSEKQ---ISNFQDVY- 1251
Query: 254 KENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLREI 313
+ N +Q EAI+ L + F LIQGPPG+GKT+TI+ ++ +L T + + KG R
Sbjct: 1252 --DVNRAQSEAINAALENEGFSLIQGPPGSGKTKTIVAIVGGLLTHTLSSAY-KGATR-- 1306
Query: 314 KRGPELPMHEKYNHWGRASPWLVGA--NPRDNIMPIDGDDGFFPTTGNELKPEVVNSSRR 371
+P + N G LV A N + + + +G G VV R
Sbjct: 1307 ---ISMP-NGNANADGAVKKLLVCAPSNAAVDEIVMRLKEGVKTKDGRSHDINVVRIGRS 1362
Query: 372 YRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLVE 431
R+ +V + ++E+V + L DE R T ++ + + H + +
Sbjct: 1363 ERINAMV---GDVTMEELVQKKLGGNQMDEQKRKATAELFKEHQQVSHQLQEMYTQRNAN 1419
Query: 432 QKRDDSAA----DKQKHGATRK-----------------------DRDSIRSAILNEAVI 464
+K ++S D H RK +R + A+L+EA +
Sbjct: 1420 EKMEESERKKLDDNIGHVRRRKAELGSRIDQTKDRELAAGREQELNRKRAQQAVLDEAHV 1479
Query: 465 VCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATV 524
+C+TLS SG + LN F+ VIIDEAAQ VE ++L+PL GC + +VGDP QLP TV
Sbjct: 1480 ICATLSGSGHDMFQSLNIEFETVIIDEAAQCVEMSSLIPLKYGCVKCIMVGDPKQLPPTV 1539
Query: 525 ISPVAEHLGYGTSLFKRLQRAGYP--VKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVE 582
S A Y SLF R+Q +P V +L TQYRMHP++ +FPS FYD L+DGS++
Sbjct: 1540 FSKEAARFQYEQSLFVRMQN-NFPNEVHLLDTQYRMHPDISAFPSATFYDHKLKDGSNMA 1598
Query: 583 DYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKS 642
+ WH P+ F+D+ + P G S +N EV+ + L+ +L + +
Sbjct: 1599 ALRKKSWHASNLLAPYRFYDVKGQHSAAPKGF-SLVNHAEVEVAMALYSRLTTDFGSTYD 1657
Query: 643 -SSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDK 701
S+++ II+PY+ Q++ +++F FG+E + V+ T D QGRE ++ IFSCVRASDK
Sbjct: 1658 FSNRIGIITPYKSQLELLRKKFSTAFGLEILEKVEFNTTDAFQGREAEIIIFSCVRASDK 1717
Query: 702 KSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFR 754
+GFL D RRMNVG+TRAK S+ V+G + +L ++W L++ E++ + +
Sbjct: 1718 GGVGFLQDIRRMNVGLTRAKCSLWVLGNSESLSRGQYWRLLIEDVERKGAMVK 1770
>gi|238499341|ref|XP_002380905.1| tRNA-splicing endonuclease, putative [Aspergillus flavus NRRL3357]
gi|220692658|gb|EED49004.1| tRNA-splicing endonuclease, putative [Aspergillus flavus NRRL3357]
Length = 2122
Score = 310 bits (793), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 245/772 (31%), Positives = 372/772 (48%), Gaps = 93/772 (12%)
Query: 19 KIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKA 78
+ IL WD+F + G+ + +T++D DY TFEPLL E
Sbjct: 1020 RTILSWDFFA----------NGDLPPNSGRTDYSLISNTFRDPIDYQKTFEPLLILEAWQ 1069
Query: 79 QIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADEVE--SISPNDLLLLSKEEFKE 136
K+E + +++++ D F S A EV+ + DL+LLSK
Sbjct: 1070 GFQSSKEEGNFKPFEVKVATRLS-VDSFVEVSTVMPALEVKDYGLGEADLVLLSK----- 1123
Query: 137 GSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVK-SQRLLNIHSLITSSVSAVE 195
+ PT A HC A + AG I+ K V+ + R+ +S I + E
Sbjct: 1124 -ANSPTNNPSA--PHCLARV-------AG--INKKKGTVEIAYRVNPGNSFINALAPGSE 1171
Query: 196 KRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIKE 255
++ K+ SL+ + REY AL ++ + ++ A + ++ P I E
Sbjct: 1172 --IWGAKVTSLTPLEREYGALMALQYYDLCEEVVKAKPSPILNYSEATLSP------IAE 1223
Query: 256 NHNA--SQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGL----LSAILHATPARVHSKGG 309
N+N +Q +AI L AF LIQGPPG+GKT+TI+ L LS +L + G
Sbjct: 1224 NYNVNPAQAKAIKSALDNDAFTLIQGPPGSGKTKTIVALVGALLSGVLGNQGVTISRPTG 1283
Query: 310 LREIKRGPELPMHEKYNHWGRASPWLVGA--NPRDNIMPIDGDDGFFPTTGNELKPEVVN 367
+ IK P +K LV A N + + + G G K V+
Sbjct: 1284 VGNIKPPPRTTTSKKL---------LVCAPSNAAVDELVMRFKAGVKTIQGRHEKLSVIR 1334
Query: 368 SSRRYRVRVLVCAPSNSALDEIV-LRLLNTGIRDENIRSYTP-----KIVRIGLKAHHS- 420
R + V + LDE+V RL T +D R K K S
Sbjct: 1335 LGRSDAINTNVL---DVTLDELVNARLSQTSRKDSGERDLQKIYMEHKAADTAFKETRSK 1391
Query: 421 -----VNSVAID-------HLVEQKRD------DSAADKQKHGATRK---DRDSIRSAIL 459
+ + L+++K+ D+A DK H A R +R I+ I+
Sbjct: 1392 LDQCRAQGLPVPAELEREFELLKKKKTALSQEIDNARDKN-HSAARDADLNRRKIQQEII 1450
Query: 460 NEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQ 519
+ A ++C+TLS SG + L+ F+ V+IDEAAQ++E + L+PL GC + LVGDP Q
Sbjct: 1451 DGAHVICATLSGSGHEMFQNLSIEFETVVIDEAAQSIELSALIPLKYGCSKCILVGDPKQ 1510
Query: 520 LPATVISPVAEHLGYGTSLFKRLQRAGYP--VKMLKTQYRMHPEVRSFPSREFYDEALED 577
LP TV+S VA Y SLF R+Q + +P V +L QYRMHPE+ ++P FYD L+D
Sbjct: 1511 LPPTVLSKVASKFQYEQSLFVRMQ-SNHPRDVHLLDIQYRMHPEISAYPRNAFYDGKLQD 1569
Query: 578 GSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMY 637
G D+ R WH+ P+ FFD+ +G A S +N+ E+ + L+ +L+S +
Sbjct: 1570 GPDMARLRARPWHQSELLSPYRFFDV-QGLHQSAAKGHSLVNMAELRVAMQLYERLVSDF 1628
Query: 638 PQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVR 697
S ++ II+PY+ Q+++ + F +G ++D T D QGRE +V IFSCVR
Sbjct: 1629 QGFDFSGKIGIITPYKGQLRELKTHFAAKYGNAIFNMIDFNTTDAFQGRESEVIIFSCVR 1688
Query: 698 ASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQ 749
AS+ K IGFL+D RRMNVG+TRAKSS+ V+G + +L + + WN+L+K A ++
Sbjct: 1689 ASN-KGIGFLSDIRRMNVGLTRAKSSLWVLGNSQSLVQGEFWNSLIKDARRR 1739
>gi|407920626|gb|EKG13814.1| hypothetical protein MPH_09028 [Macrophomina phaseolina MS6]
Length = 1990
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 245/775 (31%), Positives = 374/775 (48%), Gaps = 94/775 (12%)
Query: 19 KIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKA 78
+ IL WDYF +D + R + R V + ++ DY F+PLL E
Sbjct: 1075 RTILSWDYF---------HDGDYPPNSRPDIYSR-VPNKFQSPFDYKNIFQPLLTLEAWQ 1124
Query: 79 QIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADEVE-SISPNDLLLLSKEEFKEG 137
++ ++E + + +++V + L + AD E SIS D+ LLSK
Sbjct: 1125 GFVKAREEGTFKPFDVKVVNRSNVDNFIELSTNMSHADNKEISISEGDICLLSK------ 1178
Query: 138 STFPTTYAFALVEHCQANLLRL-RMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSAVEK 196
+ P T + A +C A + R+ R EV++ RL++ +LI S V
Sbjct: 1179 APQPATTSDA--PNCLARVYRITRKKAHLEVLY---------RLVHGSALIQSLVPNAT- 1226
Query: 197 RLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIKEN 256
++ +KI S++ + REY AL + D I+ A + + P Y N
Sbjct: 1227 -VYGVKIQSITPLEREYGALVGLQYYDLCDEIIKAKPSPLLNYNDKQLEP-FKDTY---N 1281
Query: 257 HNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAIL-----HATPARVHSKGGLR 311
N +Q +A+ + AF LIQGPPG+GKT+TI+ ++ A+L + + G+
Sbjct: 1282 LNRAQAKAVKSAIDNDAFTLIQGPPGSGKTKTIVAIVGALLTDSLKSGGGTVISTPAGMN 1341
Query: 312 EIKRGPELPMHEKYNHWGRASPWLVGA--NPRDNIMPIDGDDGFFPTTGNELKPEVVNSS 369
LP +K LV A N + + + +G T+G K VV
Sbjct: 1342 NAAVRNNLPAPKKL---------LVCAPSNAAVDELVMRFKEGIKTTSGQHKKISVV--- 1389
Query: 370 RRYRVRVLVCAPSNSALDEIVLRLLNTGI-RDENIRSYTPKIVRIGLKAHHSVNS----- 423
R R + + LDE+V LN ++ + R T K+ +K H +V+
Sbjct: 1390 RLGRSDAMNANVKDVTLDELVNARLNINPEQNGDQREETGKV----MKEHQAVSERLRNA 1445
Query: 424 --------VAIDHLVEQKRDDSAADKQKHGATRK-----------------DRDSIRSAI 458
V D L K + +QK + K +R + AI
Sbjct: 1446 REKLDSGEVKGDELSRLKDEFDILRRQKAQLSSKIDECKDREASQGRMADLNRKRAQQAI 1505
Query: 459 LNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPV 518
L+E+ ++C+TLS SG + LN F+ V++DEAAQ VE + L+PL GC + LVGDP
Sbjct: 1506 LDESHVICATLSGSGHEMFQNLNIEFETVVVDEAAQCVEMSALIPLKYGCAKAILVGDPK 1565
Query: 519 QLPATVISPVAEHLGYGTSLFKRLQRAGYP--VKMLKTQYRMHPEVRSFPSREFYDEALE 576
QLP TV S A Y SLF R+Q +P V +L TQYRMHPE+ FPS+ FYD L
Sbjct: 1566 QLPPTVFSKEAARFQYEQSLFVRMQ-TNHPNDVHLLDTQYRMHPEISYFPSQTFYDGRLL 1624
Query: 577 DGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISM 636
DG+D+ + WH P+ FFD+ +S P G S INI E+D + L+ +L++
Sbjct: 1625 DGADMAALREKPWHSSTLLAPYRFFDVQGQHQSAPKGH-SLINIAEIDVAMALYSRLMND 1683
Query: 637 YP-QLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSC 695
+ + ++ II+PY+ Q+++ ++RF +G + V+ T D QGRE ++ IFSC
Sbjct: 1684 FKDSVDLRGKIGIITPYKSQLRELKDRFARQYGDTVFEYVEFNTTDAYQGRESEIIIFSC 1743
Query: 696 VRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQD 750
VRAS IGFL D RRMNVG+TRAKSS+ V+G + +L + W LV+ A+K++
Sbjct: 1744 VRASPAGGIGFLQDIRRMNVGLTRAKSSLWVLGNSQSLMRGQFWKLLVEDAQKRE 1798
>gi|46128545|ref|XP_388826.1| hypothetical protein FG08650.1 [Gibberella zeae PH-1]
Length = 2078
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 236/772 (30%), Positives = 368/772 (47%), Gaps = 81/772 (10%)
Query: 16 RFCKIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEE 75
R IL WD F ND V EV Y D Y TF PLL E
Sbjct: 1127 RLHNTILSWDIF------HGGNDPPKGPV------ASEVATKYSDPKTYQDTFFPLLASE 1174
Query: 76 VKAQIIQKKDEEEVQEWKLRLVMECG-----EADGFHLPSVTYEADEVESISPNDLLLLS 130
+ KDE Q + +++ EA F +P V + +S D+LL+S
Sbjct: 1175 AWRSFVTAKDEITSQAFGMKIASRASVDSYLEAT-FTMPVVQ---NRERGVSEGDILLVS 1230
Query: 131 KEEFKEGSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSS 190
+ E G HC A + R+ E++ I + R + ++T +
Sbjct: 1231 ESENPLGDQ--------TARHCLARVHRI--TYKKELVEITYRV--ASRNNPMTQVLTPN 1278
Query: 191 VSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLH 250
VS +F +KI +++TI REY AL S+ D IL+A D++ K+ +
Sbjct: 1279 VS-----VFGVKITNMTTIEREYAALESLQYYDLMDEILNAKPSPILRYDEA-KVNNCMQ 1332
Query: 251 EYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGL 310
Y + A + H+ F LIQGPPGTGKT+TI+ ++ +L ++ ++G
Sbjct: 1333 NYSLNHGQAMAVLGAHDN---DGFTLIQGPPGTGKTKTIVAMVGTLLSEQLSQASNQGFP 1389
Query: 311 REIKRGPELPMHEKYNHWGRASPWLVGA--NPRDNIMPIDGDDGFFPTTGNELKPEVVNS 368
+ P + N R+ LV A N + + + G +G K + +N
Sbjct: 1390 VGVPLRPT--GLQASNSQKRSKKLLVCAPSNAAVDELVLRLKAGVKTISG---KTKSINV 1444
Query: 369 SRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPK-------------IVRIGL 415
R R + A + LDE+V L + ++ K I+R +
Sbjct: 1445 LRLGRSDAINAAVRDVTLDELVKARLEGDQTKDKAKANRDKLHEDAGKIKEQLAILRPLM 1504
Query: 416 KAH--------HSVNSVAIDHLVEQKRDDSA---ADKQKHGATRKD----RDSIRSAILN 460
+A ++ +S D L ++ D ADK + ++ R ++ ILN
Sbjct: 1505 EASKDHEDRTTYTKHSREFDALKRRQMDIGKQIDADKSSGNSVAREMEVRRRQVQQEILN 1564
Query: 461 EAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQL 520
A ++C+TLS SG + L+ F+ VIIDEAAQ VE + L+PL GC + LVGDP QL
Sbjct: 1565 NAQVLCATLSGSGHEMFRNLDVEFETVIIDEAAQCVELSALIPLKYGCYRCVLVGDPKQL 1624
Query: 521 PATVISPVAEHLGYGTSLFKRLQRAGYP--VKMLKTQYRMHPEVRSFPSREFYDEALEDG 578
P TV+S A GY SLF R+Q+ +P V +L QYRMHPE+ FPSREFY+ L DG
Sbjct: 1625 PPTVLSQSAAKFGYDQSLFVRMQQ-NHPDWVHLLDMQYRMHPEISMFPSREFYEGQLADG 1683
Query: 579 SDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYP 638
++ + + WH+ GP+ FFD+ +G +++ S +N E+D + ++ + + Y
Sbjct: 1684 QNMHELRQQPWHQSALLGPYRFFDV-QGVQARGHKGQSLVNTRELDVAMQMYDRFSNEYG 1742
Query: 639 QLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRA 698
+ ++ II+PY+ Q+ + + RF+ +G +++ T D QGRE ++ IFSCVRA
Sbjct: 1743 DCDLTGKIGIITPYKAQLFELRNRFRSRYGEGITDIIEFNTTDAFQGRECEIIIFSCVRA 1802
Query: 699 SDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQD 750
S IGF+ D RRMNVG+TRAKSS+ ++G + L + + W L++ A+ +D
Sbjct: 1803 SSTGGIGFMTDIRRMNVGLTRAKSSLWILGDSRALVQGEFWKKLIEDAQSRD 1854
>gi|303278610|ref|XP_003058598.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459758|gb|EEH57053.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 826
Score = 309 bits (791), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 167/370 (45%), Positives = 228/370 (61%), Gaps = 25/370 (6%)
Query: 415 LKAHHSVNSVAIDHLVEQK--------RDDSAADKQKHGATRKDRDSIRSAILNEAVIVC 466
++++ + SV ++ LV ++ +D AA+K A +DR I AIL+EA +VC
Sbjct: 280 VRSYGQLPSVTMEALVNERQGTGKDANKDGGAAEKNFERALERDRAQI--AILDEAAVVC 337
Query: 467 STLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVIS 526
STLSFSGS + +++ FDVV+IDEAAQAVEP+TLVPL G KQVFLVGDP QLPATV+S
Sbjct: 338 STLSFSGSGMFARMTRQFDVVVIDEAAQAVEPSTLVPLCYGAKQVFLVGDPRQLPATVLS 397
Query: 527 PVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTT 586
A Y SLFKR +R GYP+ +LKTQYRMHP +R FPS FY LEDG T+
Sbjct: 398 SRATEYAYNQSLFKRFERCGYPIHVLKTQYRMHPAIREFPSARFYQNELEDGPRQAAKTS 457
Query: 587 RDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQL 646
R WH F PF F DI GKE G+ SW N +E + + L+ YPQL + ++
Sbjct: 458 RPWHNVSLFRPFVFVDI-AGKEYLGGGT-SWSNDEEAHAAVAIATALMRNYPQLATGEKI 515
Query: 647 AIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDK----- 701
IISPY+ QV+ ++ + G E VD+ ++DG QGREK+V +FS RA +
Sbjct: 516 GIISPYKAQVRNIRKILNDAIGEERSSRVDVNSIDGFQGREKEVCVFSVCRAPREDRGAK 575
Query: 702 ----KSIGFLADYRRMNVGITRAKSSILVVGCASTLRE--DKHWNNLVKSAEKQDCLFRV 755
+ +GF++D RRMNVG+TRA++S++V+G L+ D++W LV SA ++D + V
Sbjct: 576 KKKTRRLGFVSDERRMNVGLTRARASLIVLGSGKALKASGDENWCALVNSARERDLI--V 633
Query: 756 SKPYASFFSD 765
P AS D
Sbjct: 634 KPPSASGRGD 643
Score = 151 bits (381), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/232 (42%), Positives = 129/232 (55%), Gaps = 19/232 (8%)
Query: 206 LSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIKENHNASQLEAI 265
+STIARE+LAL + SLPF D ++S ++ W++P L + +N SQ+ A+
Sbjct: 1 MSTIAREWLALHAFPSLPFADTVMSGKVQARAPHS-VWELPPPLLNAMNAAYNVSQVTAL 59
Query: 266 HEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGG----------LREIKR 315
L ++ LIQGPPGTGKT+ IL LLS ILHA P +K G +R K+
Sbjct: 60 KAALEKQPITLIQGPPGTGKTRIILSLLSVILHAVPG---AKSGHELELQRYLDVRN-KK 115
Query: 316 GPELPMHEKYNHWGRASPWLVG-ANPRDNIMPIDGDDGFFPTTGNELKPEVVNSSRRYRV 374
P P E RA PWL G ANPRD G T E+ PE+V R
Sbjct: 116 KPRTPA-ETSAMIRRAMPWLSGVANPRDAPPLPRGAPPPP-KTPTEV-PEIVGDVASKRT 172
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAI 426
+VLVCAPSNSALDEIVLR++ +G+ + Y+P +VR+G+ HHSV S A
Sbjct: 173 KVLVCAPSNSALDEIVLRIMQSGLFGPDGDPYSPTLVRVGVSWHHSVESGAF 224
>gi|317150187|ref|XP_001823850.2| tRNA-splicing endonuclease [Aspergillus oryzae RIB40]
Length = 2103
Score = 309 bits (791), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 255/841 (30%), Positives = 396/841 (47%), Gaps = 104/841 (12%)
Query: 19 KIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKA 78
+ IL WD+F + G+ + +T++D DY TFEPLL E
Sbjct: 1082 RTILSWDFFA----------NGDLPPNSGRTDYSLISNTFRDPIDYQKTFEPLLILEAWQ 1131
Query: 79 QIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADEVE--SISPNDLLLLSKEEFKE 136
K+E + +++++ D F S A EV+ + D++LLSK
Sbjct: 1132 GFQSSKEEGNFKPFEVKVATRLS-VDSFVEVSTVMPALEVKDYGLGEADIVLLSK----- 1185
Query: 137 GSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVK-SQRLLNIHSLITSSVSAVE 195
+ PT A HC A + AG I+ K V+ + R+ +S I + E
Sbjct: 1186 -ANSPTNNPSA--PHCLARV-------AG--INKKKGTVEIAYRVNPGNSFINALAPGSE 1233
Query: 196 KRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIKE 255
++ K+ SL+ + REY AL ++ + ++ A + ++ P I E
Sbjct: 1234 --IWGAKVTSLTPLEREYGALMALQYYDLCEEVVKAKPSPILNYSEATLSP------IAE 1285
Query: 256 NHNA--SQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGL----LSAILHATPARVHSKGG 309
N+N +Q +AI L AF LIQGPPG+GKT+TI+ L LS +L + G
Sbjct: 1286 NYNVNPAQAKAIKSALDNDAFTLIQGPPGSGKTKTIVALVGALLSGVLGNQGVTISRPTG 1345
Query: 310 LREIKRGPELPMHEKYNHWGRASPWLVGA--NPRDNIMPIDGDDGFFPTTGNELKPEVVN 367
+ IK P +K LV A N + + + G G K V+
Sbjct: 1346 VGNIKPPPRTTTSKKL---------LVCAPSNAAVDELVMRFKAGVKTIQGRHEKLSVIR 1396
Query: 368 SSRRYRVRVLVCAPSNSALDEIV-LRLLNTGIRDENIRSYTP-----KIVRIGLKAHHS- 420
R + V + LDE+V RL T +D R K K S
Sbjct: 1397 LGRSDAINTNVL---DVTLDELVNARLSQTSRKDSGERDLQKIYMEHKAADTAFKETRSK 1453
Query: 421 -----VNSVAID-------HLVEQKRD------DSAADKQKHGATRK---DRDSIRSAIL 459
+ + L+++K+ D+A DK H A R +R I+ I+
Sbjct: 1454 LDQCRAQGLPVPAELEREFELLKKKKTALSQEIDNARDKN-HSAARDADLNRRKIQQEII 1512
Query: 460 NEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQ 519
+ A ++C+TLS SG + L+ F+ V+IDEAAQ++E + L+PL GC + LVGDP Q
Sbjct: 1513 DGAHVICATLSGSGHEMFQNLSIEFETVVIDEAAQSIELSALIPLKYGCSKCILVGDPKQ 1572
Query: 520 LPATVISPVAEHLGYGTSLFKRLQRAGYP--VKMLKTQYRMHPEVRSFPSREFYDEALED 577
LP TV+S VA Y SLF R+Q + +P V +L QYRMHPE+ ++P FYD L+D
Sbjct: 1573 LPPTVLSKVASKFQYEQSLFVRMQ-SNHPRDVHLLDIQYRMHPEISAYPRNAFYDGKLQD 1631
Query: 578 GSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMY 637
G D+ R WH+ P+ FFD+ +G A S +N+ E+ + L+ +L+S +
Sbjct: 1632 GPDMARLRARPWHQSELLSPYRFFDV-QGLHQSAAKGHSLVNMAELRVAMQLYERLVSDF 1690
Query: 638 PQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVR 697
S ++ II+PY+ Q+++ + F +G ++D T D QGRE +V IFSCVR
Sbjct: 1691 QGFDFSGKIGIITPYKGQLRELKTHFAAKYGNAIFNMIDFNTTDAFQGRESEVIIFSCVR 1750
Query: 698 ASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQ------DC 751
AS+ K IGFL+D RRMNVG+TRAKSS+ V+G + +L + + WN+L+K A ++ D
Sbjct: 1751 ASN-KGIGFLSDIRRMNVGLTRAKSSLWVLGNSQSLVQGEFWNSLIKDARRRSVYTDGDV 1809
Query: 752 LFRVSKPYASFFSDENLESMRKNATTDNVQGADGHVPHDDETMHYANTGDADQGQADDID 811
L + +P F +N++ + + DG ++ Y + + G A +D
Sbjct: 1810 LKILQRP--QFTGYKNVDMLDADGPESTKPSVDGTFGKNEP---YVSPPEGPSGGASGLD 1864
Query: 812 N 812
+
Sbjct: 1865 D 1865
>gi|391873505|gb|EIT82535.1| tRNA-splicing endonuclease positive effector [Aspergillus oryzae
3.042]
Length = 2123
Score = 308 bits (790), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 244/772 (31%), Positives = 372/772 (48%), Gaps = 93/772 (12%)
Query: 19 KIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKA 78
+ IL WD+F + G+ + +T++D DY TFEPLL E
Sbjct: 1082 RTILSWDFFA----------NGDLPPNSGRTDYSLISNTFRDPIDYQKTFEPLLILEAWQ 1131
Query: 79 QIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADEVE--SISPNDLLLLSKEEFKE 136
K+E + +++++ D F S A EV+ + D++LLSK
Sbjct: 1132 GFQSSKEEGNFKPFEVKVATRLS-VDSFVEVSTVMPALEVKDYGLGEADIVLLSK----- 1185
Query: 137 GSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVK-SQRLLNIHSLITSSVSAVE 195
+ PT A HC A + AG I+ K V+ + R+ +S I + E
Sbjct: 1186 -ANSPTNNPSA--PHCLARV-------AG--INKKKGTVEIAYRVNPGNSFINALAPGSE 1233
Query: 196 KRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIKE 255
++ K+ SL+ + REY AL ++ + ++ A + ++ P I E
Sbjct: 1234 --IWGAKVTSLTPLEREYGALMALQYYDLCEEVVKAKPSPILNYSEATLSP------IAE 1285
Query: 256 NHNA--SQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGL----LSAILHATPARVHSKGG 309
N+N +Q +AI L AF LIQGPPG+GKT+TI+ L LS +L + G
Sbjct: 1286 NYNVNPAQAKAIKSALDNDAFTLIQGPPGSGKTKTIVALVGALLSGVLGNQGVTISRPTG 1345
Query: 310 LREIKRGPELPMHEKYNHWGRASPWLVGA--NPRDNIMPIDGDDGFFPTTGNELKPEVVN 367
+ IK P +K LV A N + + + G G K V+
Sbjct: 1346 VGNIKPPPRTTTSKKL---------LVCAPSNAAVDELVMRFKAGVKTIQGRHEKLSVIR 1396
Query: 368 SSRRYRVRVLVCAPSNSALDEIV-LRLLNTGIRDENIRSYTP-----KIVRIGLKAHHS- 420
R + V + LDE+V RL T +D R K K S
Sbjct: 1397 LGRSDAINTNVL---DVTLDELVNARLSQTSRKDSGERDLQKIYMEHKAADTAFKETRSK 1453
Query: 421 -----VNSVAID-------HLVEQKRD------DSAADKQKHGATRK---DRDSIRSAIL 459
+ + L+++K+ D+A DK H A R +R I+ I+
Sbjct: 1454 LDQCRAQGLPVPAELEREFELLKKKKTALSQEIDNARDKN-HSAARDADLNRRKIQQEII 1512
Query: 460 NEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQ 519
+ A ++C+TLS SG + L+ F+ V+IDEAAQ++E + L+PL GC + LVGDP Q
Sbjct: 1513 DGAHVICATLSGSGHEMFQNLSIEFETVVIDEAAQSIELSALIPLKYGCSKCILVGDPKQ 1572
Query: 520 LPATVISPVAEHLGYGTSLFKRLQRAGYP--VKMLKTQYRMHPEVRSFPSREFYDEALED 577
LP TV+S VA Y SLF R+Q + +P V +L QYRMHPE+ ++P FYD L+D
Sbjct: 1573 LPPTVLSKVASKFQYEQSLFVRMQ-SNHPRDVHLLDIQYRMHPEISAYPRNAFYDGKLQD 1631
Query: 578 GSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMY 637
G D+ R WH+ P+ FFD+ +G A S +N+ E+ + L+ +L+S +
Sbjct: 1632 GPDMARLRARPWHQSELLSPYRFFDV-QGLHQSAAKGHSLVNMAELRVAMQLYERLVSDF 1690
Query: 638 PQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVR 697
S ++ II+PY+ Q+++ + F +G ++D T D QGRE +V IFSCVR
Sbjct: 1691 QGFDFSGKIGIITPYKGQLRELKTHFAAKYGNAIFNMIDFNTTDAFQGRESEVIIFSCVR 1750
Query: 698 ASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQ 749
AS+ K IGFL+D RRMNVG+TRAKSS+ V+G + +L + + WN+L+K A ++
Sbjct: 1751 ASN-KGIGFLSDIRRMNVGLTRAKSSLWVLGNSQSLVQGEFWNSLIKDARRR 1801
>gi|83772589|dbj|BAE62717.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 1850
Score = 308 bits (790), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 244/772 (31%), Positives = 372/772 (48%), Gaps = 93/772 (12%)
Query: 19 KIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKA 78
+ IL WD+F + G+ + +T++D DY TFEPLL E
Sbjct: 959 RTILSWDFFA----------NGDLPPNSGRTDYSLISNTFRDPIDYQKTFEPLLILEAWQ 1008
Query: 79 QIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADEVE--SISPNDLLLLSKEEFKE 136
K+E + +++++ D F S A EV+ + D++LLSK
Sbjct: 1009 GFQSSKEEGNFKPFEVKVATRLS-VDSFVEVSTVMPALEVKDYGLGEADIVLLSK----- 1062
Query: 137 GSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVK-SQRLLNIHSLITSSVSAVE 195
+ PT A HC A + AG I+ K V+ + R+ +S I + E
Sbjct: 1063 -ANSPTNNPSA--PHCLARV-------AG--INKKKGTVEIAYRVNPGNSFINALAPGSE 1110
Query: 196 KRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIKE 255
++ K+ SL+ + REY AL ++ + ++ A + ++ P I E
Sbjct: 1111 --IWGAKVTSLTPLEREYGALMALQYYDLCEEVVKAKPSPILNYSEATLSP------IAE 1162
Query: 256 NHNA--SQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGL----LSAILHATPARVHSKGG 309
N+N +Q +AI L AF LIQGPPG+GKT+TI+ L LS +L + G
Sbjct: 1163 NYNVNPAQAKAIKSALDNDAFTLIQGPPGSGKTKTIVALVGALLSGVLGNQGVTISRPTG 1222
Query: 310 LREIKRGPELPMHEKYNHWGRASPWLVGA--NPRDNIMPIDGDDGFFPTTGNELKPEVVN 367
+ IK P +K LV A N + + + G G K V+
Sbjct: 1223 VGNIKPPPRTTTSKKL---------LVCAPSNAAVDELVMRFKAGVKTIQGRHEKLSVIR 1273
Query: 368 SSRRYRVRVLVCAPSNSALDEIV-LRLLNTGIRDENIRSYTP-----KIVRIGLKAHHS- 420
R + V + LDE+V RL T +D R K K S
Sbjct: 1274 LGRSDAINTNVL---DVTLDELVNARLSQTSRKDSGERDLQKIYMEHKAADTAFKETRSK 1330
Query: 421 -----VNSVAID-------HLVEQKRD------DSAADKQKHGATRK---DRDSIRSAIL 459
+ + L+++K+ D+A DK H A R +R I+ I+
Sbjct: 1331 LDQCRAQGLPVPAELEREFELLKKKKTALSQEIDNARDKN-HSAARDADLNRRKIQQEII 1389
Query: 460 NEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQ 519
+ A ++C+TLS SG + L+ F+ V+IDEAAQ++E + L+PL GC + LVGDP Q
Sbjct: 1390 DGAHVICATLSGSGHEMFQNLSIEFETVVIDEAAQSIELSALIPLKYGCSKCILVGDPKQ 1449
Query: 520 LPATVISPVAEHLGYGTSLFKRLQRAGYP--VKMLKTQYRMHPEVRSFPSREFYDEALED 577
LP TV+S VA Y SLF R+Q + +P V +L QYRMHPE+ ++P FYD L+D
Sbjct: 1450 LPPTVLSKVASKFQYEQSLFVRMQ-SNHPRDVHLLDIQYRMHPEISAYPRNAFYDGKLQD 1508
Query: 578 GSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMY 637
G D+ R WH+ P+ FFD+ +G A S +N+ E+ + L+ +L+S +
Sbjct: 1509 GPDMARLRARPWHQSELLSPYRFFDV-QGLHQSAAKGHSLVNMAELRVAMQLYERLVSDF 1567
Query: 638 PQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVR 697
S ++ II+PY+ Q+++ + F +G ++D T D QGRE +V IFSCVR
Sbjct: 1568 QGFDFSGKIGIITPYKGQLRELKTHFAAKYGNAIFNMIDFNTTDAFQGRESEVIIFSCVR 1627
Query: 698 ASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQ 749
AS+ K IGFL+D RRMNVG+TRAKSS+ V+G + +L + + WN+L+K A ++
Sbjct: 1628 ASN-KGIGFLSDIRRMNVGLTRAKSSLWVLGNSQSLVQGEFWNSLIKDARRR 1678
>gi|366997484|ref|XP_003678504.1| hypothetical protein NCAS_0J01870 [Naumovozyma castellii CBS 4309]
gi|342304376|emb|CCC72166.1| hypothetical protein NCAS_0J01870 [Naumovozyma castellii CBS 4309]
Length = 2314
Score = 308 bits (790), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 238/790 (30%), Positives = 379/790 (47%), Gaps = 85/790 (10%)
Query: 21 ILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKAQI 80
IL WDY R R+D + G +VKD + +Y PLL E +
Sbjct: 1087 ILQWDYTR-------RHDYPDAE---GIEHYADVKDQFDSAAEYQKIMRPLLLLESWQGL 1136
Query: 81 IQKKDEEEVQEWKLRLVMECGEADGFHL-PSVTYEADEVESISPNDLLLLSK-EEFKEGS 138
+D ++ + + + ++ + + S++ + IS +DL++L+ +K G
Sbjct: 1137 CSARDRQDSSPFSIIVGNRTAVSEFYEVYASMSKNVLQDSGISDSDLIVLAYFPNYKRGD 1196
Query: 139 TFPTTYAFALVEH-CQANLLRLRMYLAGEV-----IHINKDAVKSQRLLNIHSLITSSVS 192
TT F E+ C A + + G V IH N+ K L + S
Sbjct: 1197 RL-TTEDFKRAENTCLAKVRSFKNVKGGNVDITLRIHRNQQFSK---FLTLRS------- 1245
Query: 193 AVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEY 252
+ ++K+ ++TI REY L L + DL+ + Q +P E
Sbjct: 1246 ----EIHAVKVMQMTTIEREYQTLEG---LDYYDLVNQIIKAKPSPQ---MTVPPQEIEL 1295
Query: 253 IKENHN--ASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGL 310
+K+N+N SQ +AI + + F LIQGPPGTGKT+TILG++ L ++ +
Sbjct: 1296 VKQNYNLNTSQADAIVNTVAKDGFSLIQGPPGTGKTKTILGIIGYFLST--RKMLPSNAI 1353
Query: 311 REIKRGPELPMHEKYNHWGRASPWLVGA--NPRDNIMPIDGDDGFFPTTGNELKPEVVNS 368
+ M + + L+ A N + + I DG F G +P +V
Sbjct: 1354 KTPTNSSTSSM--TIDQMLKKQKILICAPSNAAVDEICIRLKDGIFDRNGKLFRPNLVRV 1411
Query: 369 SRRYRVRVLVCAPSNSALDEIVLRLL--------NTGIRDENIRSYTPK--IVRIGLKAH 418
R V V + + L+E+V + L N + N + K +R L A
Sbjct: 1412 GRSDVVNVQI---KDLTLEELVDKRLAQKNYEFSNNPELERNFSAAVSKRRTLRAQLDAE 1468
Query: 419 HSV-------NSVA------------IDHLVEQKRDDSAADKQKHGATRKDRDSIRSAIL 459
N +A I+ L Q+ + + + DR + ++ IL
Sbjct: 1469 EGTPTSKLPTNDIAKIQLEIRELSKQINELGRQRDEMRERNSVNYRNRDLDRRNAQAQIL 1528
Query: 460 NEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQ 519
+ I+CSTLS S +L+ L FD VIIDEA Q E ++++PL G K+ +VGDP Q
Sbjct: 1529 ACSDIICSTLSGSAHDVLAGLGIKFDTVIIDEACQCTELSSIIPLRYGGKRCIMVGDPNQ 1588
Query: 520 LPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGS 579
LP TV+S A + Y SLF R+++ P +L QYRMHPE+ FPS EFY+ L+DG
Sbjct: 1589 LPPTVLSGAASNFKYNQSLFVRMEKNTTPY-LLDVQYRMHPEISKFPSAEFYNGRLKDGP 1647
Query: 580 DVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYP- 638
++E+ R WH F P+ FFDI GK+ Q + S+IN++E+ L L L +
Sbjct: 1648 NMEEVNMRPWHSTSPFSPYKFFDIVSGKQQQNKKTMSYINMEEIQVALELVDSLFQQFEN 1707
Query: 639 QLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRA 698
++ + ++ +ISPYR Q+++ ++ F FG + VD T+DG QG+EK++ I SCVRA
Sbjct: 1708 RIDFTGKIGVISPYREQMQRMRKEFLRYFGGTIMQYVDFNTIDGFQGQEKEIIIISCVRA 1767
Query: 699 SD-KKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRVSK 757
D + S+GFL D+RRMNV TRAK+S+ ++G +L ++K W +L+ A+ ++CL +
Sbjct: 1768 DDTQSSVGFLKDFRRMNVAFTRAKASLWILGHQQSLIKNKLWRDLIIDAKNRNCL---TT 1824
Query: 758 PYASFFSDEN 767
Y+ F + +N
Sbjct: 1825 AYSGFLNKKN 1834
>gi|116193595|ref|XP_001222610.1| hypothetical protein CHGG_06515 [Chaetomium globosum CBS 148.51]
gi|88182428|gb|EAQ89896.1| hypothetical protein CHGG_06515 [Chaetomium globosum CBS 148.51]
Length = 2053
Score = 308 bits (789), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 236/771 (30%), Positives = 367/771 (47%), Gaps = 92/771 (11%)
Query: 19 KIILGWDYFRLVKESQERNDK-NSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVK 77
+ IL WD F E ND N + DR V D Y D Y TF PLL E
Sbjct: 1114 QAILEWDIF------HEGNDPPNGYRCDR-------VSDDYSDPHSYKQTFFPLLINEAW 1160
Query: 78 AQIIQKKDEEEVQEWKLRLVMECGEADGFH--LPSVTYEADEVESISPNDLLLLSKEEFK 135
+ KDE + + ++ V+ D F SV + + +S D++L+S+ E
Sbjct: 1161 RSFVTSKDEATSKPFGIK-VLNRMTVDKFMEVTASVPAQISKDRGLSEGDIVLVSRGE-- 1217
Query: 136 EGSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNI--HSLITSSVSA 193
+ PT HC + + + KD V+ LN + ++ + +
Sbjct: 1218 DPLNQPTEL------HCLSRIWK---------TSYKKDTVEVVYRLNARGNQILPALLPG 1262
Query: 194 VEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYI 253
E + +KI +++TI REY AL S+ D +L A + S + + G++ Y
Sbjct: 1263 SEFNV--VKITNMTTIEREYAALESLQYYDLMDEVLKA-QPSPMLTFGNEAVKGVMENY- 1318
Query: 254 KENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLREI 313
N Q AI F L+QGPPGTGKT+TI+ ++ +L T S G + +
Sbjct: 1319 --QLNPGQARAILNAKENDGFTLVQGPPGTGKTKTIVAMVGCLL--TGVLKSSSGAVPVV 1374
Query: 314 KRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNSSRRYR 373
+ G +P +N + + + G G K EV+ R R
Sbjct: 1375 RPGAASINQAPSKKLLVCAP----SNAAVDELVLRLKAGVKTMNGASHKIEVI---RLGR 1427
Query: 374 VRVLVCAPSNSALDEIVLRLLNT-----------------GIRDENIRSYTPKIVRIGLK 416
+ A + LDE+V +++ G+ E I P++
Sbjct: 1428 TDAINAAVKDVTLDELVKARMDSAMNNSGPSDREKLHQEAGMLKEKITELRPQLE----A 1483
Query: 417 AHHSVNSVAIDHLVEQKRDDSAADKQKHGATRKD----------------RDSIRSAILN 460
A S + I L Q+ D +Q H + D R I+ IL+
Sbjct: 1484 ARASGDRTFIMKL--QREFDDLKHRQAHVGAKIDANKSNGNTFAREVEIKRRQIQQDILD 1541
Query: 461 EAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQL 520
+A ++C+TLS SG + LN F+ VIIDEAAQ VE + L+PL GC + LVGDP QL
Sbjct: 1542 KAQVLCATLSGSGHEMFKNLNVEFETVIIDEAAQCVELSALIPLKYGCSKCILVGDPKQL 1601
Query: 521 PATVISPVAEHLGYGTSLFKRLQRA-GYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGS 579
P TV+S A GY SLF R+Q+ V +L QYRMHPE+ FPS+EFY+ L+DG+
Sbjct: 1602 PPTVLSQSAARYGYDQSLFVRMQKNHAKDVHLLDMQYRMHPEISKFPSKEFYEGLLQDGA 1661
Query: 580 DVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQ 639
D+ + WH+ GP+ FFD+ +G +S+ + S +N +E+ + L+H+ + Y
Sbjct: 1662 DMGQLRMQPWHQSELLGPYRFFDV-KGSQSRGPRNQSLVNDEELKVAMQLYHRFRTDYGN 1720
Query: 640 LKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRAS 699
++ ++ II+PY+ Q+ + ++RF E +G + ++ T D QGRE ++ IFSCVRAS
Sbjct: 1721 VELKGKIGIITPYKAQLFRLRQRFAEKYGDGIAEEIEFNTTDAFQGRECEIIIFSCVRAS 1780
Query: 700 DKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQD 750
IGF+ D RRMNVG+TRA+SS+ ++G + L + + W L++ A+++D
Sbjct: 1781 PTGGIGFMTDIRRMNVGLTRARSSLWILGDSRALVQGEFWGKLIEDAKERD 1831
>gi|240273304|gb|EER36825.1| helicase SEN1 [Ajellomyces capsulatus H143]
Length = 2150
Score = 308 bits (788), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 239/779 (30%), Positives = 378/779 (48%), Gaps = 107/779 (13%)
Query: 19 KIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKA 78
+ +L W++F + G+ V +T+ D DY TFEPLL E
Sbjct: 1086 RTLLSWEFFA----------NGDLPPNSGRTDYSLVSNTFADAADYQKTFEPLLILEAWQ 1135
Query: 79 QIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTY----EADEVESISPNDLLLLSKEEF 134
K+E + ++++ V D F + +T+ EA ++ ++ +DL+LLSK
Sbjct: 1136 SFQTAKEEGGFKAFEIK-VSNRMSVDAF-VEVITFMQPTEAKDL-GLAESDLVLLSK--- 1189
Query: 135 KEGSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSAV 194
S P++ A HC A + R +VK + ++ I I S +
Sbjct: 1190 ---SNNPSSDEKA--PHCLARIFR---------------SVKKKGMMEISYRINPSNPLM 1229
Query: 195 EK-----RLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLL 249
L ++++ SL+ + REY AL ++ + I+ K+ S ++ + L
Sbjct: 1230 SSILPGASLHAVRVASLTPVEREYGALMALKYYDLSEEII----KAKPSPILNYSLESLK 1285
Query: 250 HEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATP-------A 302
N +Q +A+ + AF LIQGPPG+GKT+TI+ L+ AIL TP A
Sbjct: 1286 PIIDTYKVNPAQAKAVRSAMDNDAFTLIQGPPGSGKTKTIVALVGAIL--TPVFAEQKIA 1343
Query: 303 RVHSKGGLREIKRGPELPMHEKYNHWGRASPWLVGA--NPRDNIMPIDGDDGFFPTTGNE 360
R S G R R + LV A N + + + +G ++G +
Sbjct: 1344 RPGSSGDFRPATRA------------TTSGKLLVCAPSNAAVDELVMRFKEGVITSSGQK 1391
Query: 361 LKPEVVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIR----DENIRSYTP-------- 408
VV R + V + LDE+V L R ++++++Y
Sbjct: 1392 HNISVVRLGRSDAINSNVM---DVTLDELVNAKLGQNGRKNGSEKDLQTYYSEHKGACTQ 1448
Query: 409 ------KIVRIGLKAHHSVNSVAIDH-LVEQKRD------DSAADKQKHGATRKD--RDS 453
++ + K H + + + L+++K+ D+A D + A D R
Sbjct: 1449 FNEIRERLDQCRAKGQHVPSELEREFDLLKRKKAQLSQAIDNARDSNQAAARNADLARKK 1508
Query: 454 IRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFL 513
++ I+N + ++C+TLS SG + L+ F+ V+IDEAAQ++E + L+PL GC + L
Sbjct: 1509 VQQEIINGSHVICATLSGSGHEMFQSLSIEFETVVIDEAAQSIELSALIPLKYGCSKCIL 1568
Query: 514 VGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYP--VKMLKTQYRMHPEVRSFPSREFY 571
VGDP QLP TV+S VA Y SLF R+Q A +P V +L TQYRMHPE+ FPS FY
Sbjct: 1569 VGDPKQLPPTVLSKVASRFQYEQSLFVRMQ-ANHPKDVHLLDTQYRMHPEISRFPSAAFY 1627
Query: 572 DEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFH 631
D L+DG D++ R WH GP+ FFD+ S P G S +N+ E+ + L+
Sbjct: 1628 DGRLKDGPDMDKLRVRPWHSSELLGPYRFFDVQGLHSSAPKGH-SLVNLAELRVAMKLYE 1686
Query: 632 KLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVA 691
+L Y ++ II+PY+ Q+++ + +F +G V+ T D QGRE +V
Sbjct: 1687 RLTIDYMTYDFKGKIGIITPYKGQLREMKNQFANKYGNSIFTTVEFNTTDAFQGRECEVI 1746
Query: 692 IFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQD 750
IFSCVRAS+ + IGFLAD RRMNVG+TRAKSS+ V+G + +L + + WN L+ A+ ++
Sbjct: 1747 IFSCVRASN-RGIGFLADIRRMNVGLTRAKSSLWVLGNSQSLVQGEFWNGLIIDAQSRN 1804
>gi|154280609|ref|XP_001541117.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150411296|gb|EDN06684.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 2150
Score = 308 bits (788), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 238/774 (30%), Positives = 378/774 (48%), Gaps = 97/774 (12%)
Query: 19 KIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKA 78
+ +L W++F + G+ V +T+ D DY TFEPLL E
Sbjct: 1086 RTLLSWEFFA----------NGDLPPNSGRTDYSLVSNTFADAADYQKTFEPLLILEAWQ 1135
Query: 79 QIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTY----EADEVESISPNDLLLLSKEEF 134
K+E + ++++ V D F + +T+ EA ++ ++ +DL+LLSK
Sbjct: 1136 SFQSAKEEGGFKAFEIK-VSNRMSVDAF-VEVITFMQPTEAKDL-GLAESDLVLLSK--- 1189
Query: 135 KEGSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVK--SQRLLNIHSLITSSVS 192
S P++ A HC A + R I K + S R+ + L++S +
Sbjct: 1190 ---SNNPSSDEKA--PHCLARIFR----------SIKKKGMMEISYRINPSNPLMSSILP 1234
Query: 193 AVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEY 252
L++ ++ SL+ + REY AL ++ + I+ K+ S ++ + L
Sbjct: 1235 GAS--LYAARVASLTPVEREYGALMALKYYDLSEEII----KAKPSPILNYSLESLKPII 1288
Query: 253 IKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPA-----RVHSK 307
N +Q +A+ + AF LIQGPPG+GKT+TI+ L+ AIL A R S
Sbjct: 1289 DTYKVNPAQAKAVRSAMDNDAFTLIQGPPGSGKTKTIVALVGAILTPVFAEQKITRPGSS 1348
Query: 308 GGLREIKRGPELPMHEKYNHWGRASPWLVGA--NPRDNIMPIDGDDGFFPTTGNELKPEV 365
G R + R LV A N + + + +G ++G + V
Sbjct: 1349 GDFRPVTRA------------TTCGKLLVCAPSNAAVDELVMRFKEGVITSSGQKQNISV 1396
Query: 366 VNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIR----DENIRSYTP------------- 408
V R + V + LDE+V L R ++++++Y
Sbjct: 1397 VRLGRSDAINSNVM---DVTLDELVNAKLGQNGRKNGSEKDLQTYYSEHKGACTQFNEIR 1453
Query: 409 -KIVRIGLKAHHSVNSVAIDH-LVEQKRD------DSAADKQKHGATRKD--RDSIRSAI 458
++ + K H + + + L+++K+ D+A D + A D R ++ I
Sbjct: 1454 ERLDQCRAKGQHVPSELEREFDLLKRKKAQLSQAIDNARDSNQAAARNADLARKKVQQEI 1513
Query: 459 LNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPV 518
+N + ++C+TLS SG + L+ F+ V+IDEAAQ++E + L+PL GC + LVGDP
Sbjct: 1514 INGSHVICATLSGSGHEMFQSLSIEFETVVIDEAAQSIELSALIPLKYGCSKCILVGDPK 1573
Query: 519 QLPATVISPVAEHLGYGTSLFKRLQRAGYP--VKMLKTQYRMHPEVRSFPSREFYDEALE 576
QLP TV+S VA Y SLF R+Q A +P V +L TQYRMHPE+ FPS FYD L+
Sbjct: 1574 QLPPTVLSKVASRFQYEQSLFVRMQ-ANHPKDVHLLDTQYRMHPEISRFPSAAFYDGRLK 1632
Query: 577 DGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISM 636
DG D+ R WH GP+ FFD+ +G S S S +N+ E+ + L+ +L
Sbjct: 1633 DGPDMAKLRVRPWHSSELLGPYRFFDV-QGLHSSAPKSHSLVNLAELRVAMKLYERLTID 1691
Query: 637 YPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCV 696
Y ++ II+PY+ Q+++ + +F +G V+ T D QGRE +V IFSCV
Sbjct: 1692 YLTYDFKGKIGIITPYKGQLREMKNQFANKYGSSIFTTVEFNTTDAFQGRECEVIIFSCV 1751
Query: 697 RASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQD 750
RAS+ + IGFLAD RRMNVG+TRAKSS+ V+G + +L + + WN L+ A+ ++
Sbjct: 1752 RASN-RGIGFLADIRRMNVGLTRAKSSLWVLGNSQSLVQGEFWNGLITDAQSRN 1804
>gi|406605000|emb|CCH43533.1| hypothetical protein BN7_3085 [Wickerhamomyces ciferrii]
Length = 2034
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 225/766 (29%), Positives = 385/766 (50%), Gaps = 77/766 (10%)
Query: 54 VKDTYKDVDDYLATFEPLLFEEVKAQIIQKKDEEEVQEWKLRLVME--CGEADGFHLPSV 111
V D + +DY+ ++EPLLF E I+ K E + + + GE L
Sbjct: 1079 VPDRFASANDYIKSYEPLLFLECWQAILSSKKRESEVPIPVNIASKSVVGEFYEVFLNLT 1138
Query: 112 TYEADEVESISPNDLLLLSKEEFKEGSTFPTTYAFALVEH---CQANLLRLRMYLAGEV- 167
E E + +S +DL++++ + S+ A + C A + ++ Y+ G+
Sbjct: 1139 RNEISE-KGLSDSDLVVIA---LHDTSSIKDVRASDVANSKITCLAKINDIK-YVKGDSA 1193
Query: 168 -----IHINKDAVKSQRLLNIHSLITSSVSAVEKRLFSLKICSLSTIAREYLALRSVGSL 222
IH N V + +LN HS I +K+ ++TI REY +L +
Sbjct: 1194 DVSLRIHRNVPQVVNN-MLNPHSPI-----------IMMKVMQMTTIEREYSSLHGLAYY 1241
Query: 223 PFKDLILSASEKSSG--SQDQSWKIPGLLHEYIKENH--NASQLEAIHEGLLRKAFVLIQ 278
IL A+ +S + D+ E +++N+ N SQ AI + + F L+Q
Sbjct: 1242 NLSRQILQATPDTSAIATDDEI--------EEVQKNYKVNRSQANAIASSIKAQGFFLVQ 1293
Query: 279 GPPGTGKTQTILGLLSAILHATPARVHSKGGLREIKRGPELPMHEKYNHWGRASPWLVGA 338
GPPGTGKT+TILG++S +L + + I+ +P + + +
Sbjct: 1294 GPPGTGKTKTILGIISHMLS------NYRANSNVIQTPSVIPGKTLADFKNKKVLICAPS 1347
Query: 339 NPRDNIMPIDGDDGFFPTTGNELKPEVVNSSRRYRVRVLVCAPSNSALDEIVLRLL--NT 396
N + + + DG G P++V R R + A + L+E+V L NT
Sbjct: 1348 NAAVDELVLRLKDGIPNAKGEIYNPQLV---RLGRSDAINTAVKDMTLEELVDAKLGKNT 1404
Query: 397 GIRDENIRSYTPKIVRIG---------LKAHHSVNSVAI-----DHLVEQKRDDSAADKQ 442
+ + I + ++ + L A ++ N + D+ ++Q + D++
Sbjct: 1405 ATKSDTIPALLKELSEVKHELEKKRAILAAGNNKNEEKVRGEIRDNKLKQNKIKKQLDEE 1464
Query: 443 KHGATRKDRD------SIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAV 496
+ T +R +I++ ILNEA I+CSTLS + +++ + FD V+IDEA Q
Sbjct: 1465 REAQTSSNRTREVNRRNIQAQILNEAEIICSTLSGAAHDMVANIGIKFDSVVIDEACQCT 1524
Query: 497 EPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQY 556
E + ++PL GC++ +VGDP QLP TV+S VA Y SLF R+ P+ +L QY
Sbjct: 1525 ELSAIIPLRYGCQRCIMVGDPNQLPPTVLSSVAAESKYDQSLFVRMTSHSKPL-LLDVQY 1583
Query: 557 RMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGS 616
RMH ++ FPS++FYD L+DG ++ T R+WH+ F P+ F+DI EGKESQ + + S
Sbjct: 1584 RMHSDISKFPSKKFYDGHLQDGPSMDVLTKREWHKNVSFPPYRFYDIAEGKESQNSKTFS 1643
Query: 617 WINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVD 676
++N E+ + L L + + ++ +++ +I+PY+ Q + Q+ F FG + + +
Sbjct: 1644 YVNKMEIKIAIELIDTLYTKFGRIDYRNKIGVITPYKEQNRAIQQAFIRHFGNQIRGDIT 1703
Query: 677 ITTVDGCQGREKDVAIFSCVRA-SDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLRE 735
T+DG QG+EK++ I SCVRA S+K +GFL D+RRMNV +TR+K S+ ++G ++L +
Sbjct: 1704 FNTIDGFQGQEKEIIIMSCVRADSNKSGVGFLKDFRRMNVALTRSKCSLWILGHNNSLVK 1763
Query: 736 DKHWNNLVKSAEKQDCLFRVSKPYASFFSDENLESMRKNATTDNVQ 781
+ W++L+ A+ ++ V Y F S+ N S++ + DN++
Sbjct: 1764 NDLWSDLITDAKDRNMFETV---YYGFTSNSN-RSIKPSTVADNLE 1805
>gi|302141933|emb|CBI19136.3| unnamed protein product [Vitis vinifera]
Length = 1073
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 206/577 (35%), Positives = 286/577 (49%), Gaps = 87/577 (15%)
Query: 203 ICSLSTIAREYLALRSVG--SLPFKDLILSAS-EKSSGSQDQSWKIPGLLH----EYIKE 255
+ SL+T REY+AL + +L + IL S E ++Q +P EY+ +
Sbjct: 530 LGSLATTQREYIALHAFRRLNLQMQTAILHPSPEHFPKYEEQPPAMPECFTPNFVEYLHK 589
Query: 256 NHNASQLEAIHEGLLRKA---------------FVLIQGPPGTGKTQTILGLLSAILHAT 300
N QL AI + A F L+QGPPGTGKT T+ G+L ++T
Sbjct: 590 TFNGPQLAAIQWAAMHTAAGTSSGVTKRQDPWPFTLVQGPPGTGKTHTVWGML----NST 645
Query: 301 PARVHSKGGLREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNE 360
V S G + E+ + D F T +
Sbjct: 646 SDNV-SMGSIDEVLQS--------------------------------MDQNLFRTLP-K 671
Query: 361 LKPEVVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHS 420
L P + R+LVCAPSN+A DE++ R+L+ G D ++ Y P + R+G+
Sbjct: 672 LCP---------KPRMLVCAPSNAATDELLARVLDRGFIDGEMKVYRPDVARVGI----- 717
Query: 421 VNSVAIDHLVEQKRDDSAADKQKHGAT---RKDRDSIRSAILNEAVIVCSTLSFSGSALL 477
LVE R + + G+ + R ++ ++ NEA IV +T+S SG L
Sbjct: 718 --------LVEMNRLVILESRFRSGSNFNLEEARANLEASFANEAEIVFTTVSSSGRKLF 769
Query: 478 SKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTS 537
S+L HGFD+V+IDEAAQA E A L PL+ G + LVGDP QLPATVIS A L Y S
Sbjct: 770 SRLTHGFDMVVIDEAAQASEVAVLPPLSLGAARCVLVGDPQQLPATVISKAAGTLLYSRS 829
Query: 538 LFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGP 597
LF+R Q+AG P +L QYRMHP +R FPSR FY L D V + +++ P
Sbjct: 830 LFERFQQAGCPTMLLSVQYRMHPHIRDFPSRYFYQGRLTDSESVTNLPDEAYYKDPLLRP 889
Query: 598 FSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSS-QLAIISPYRHQV 656
+ F+DI G+ES GS S+ NI E L L+ L L + II+PY+ Q+
Sbjct: 890 YVFYDITHGRESHRGGSVSYQNIHEAQICLRLYEHLQKTLKSLGMGKISVGIITPYKLQL 949
Query: 657 KQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVG 716
K Q F + E K + I TVD QG+E+DV I SCVRAS +GF+AD RRMNV
Sbjct: 950 KCLQREFDDVLSSEEGKDLYINTVDAFQGQERDVIIMSCVRASS-HGVGFVADIRRMNVA 1008
Query: 717 ITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLF 753
+TRA+ ++ V+G A+ L + W L+ A + C
Sbjct: 1009 LTRARRALWVMGNANALMQSDDWAALISDARARSCYL 1045
>gi|190346052|gb|EDK38051.2| hypothetical protein PGUG_02149 [Meyerozyma guilliermondii ATCC 6260]
Length = 1359
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 241/740 (32%), Positives = 357/740 (48%), Gaps = 90/740 (12%)
Query: 52 REVKDTYKDVDDYLATFEPLLFEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGFH--LP 109
+E K Y+DV DY+ EPLL E II K+ + + + LV DGF
Sbjct: 488 KETKGKYEDVKDYVKAMEPLLMLECWQGIISSKETSQESPFPM-LVGSRTSVDGFFDVYA 546
Query: 110 SVTYEADEVESISPNDLLLLS----------KEEFKEGSTFPTTYAFALVEHCQ-ANL-- 156
S+ + I+ +DLL+LS KE + +T A V + AN
Sbjct: 547 SIEKKVLNDRKITDSDLLVLSYMDNALQRSEKELATHIKSSKSTTCLAKVREIKSANADY 606
Query: 157 --LRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSAVEKRLFSLKICSLSTIAREYL 214
+ LR++ G ++ + L SV + +K+ + TI REY
Sbjct: 607 ADVTLRVFPQGTMMGV---------------LTPKSV------VIGMKVMQMITIEREYS 645
Query: 215 ALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIKENHNASQLEAIHEGLLRKAF 274
+LR + IL A + + K+ +++ Y N SQ AI R F
Sbjct: 646 SLRGLEYYNLCPAILRAFP-TGPIEVPKQKLNDVMNNY---KVNESQANAIISTHNRSGF 701
Query: 275 VLIQGPPGTGKTQTILGLLSAIL-HATPARVHSKGGLREIKRGPELPMHEKYNHWGRASP 333
LIQGPPGTGKT+TILG++ L P+ GL E+ P +S
Sbjct: 702 SLIQGPPGTGKTKTILGIVGYNLSQDVPS------GLIEVDGQQGKPQT--------SSK 747
Query: 334 WLVGA--NPRDNIMPIDGDDGFFPTTGNELKPEVVNSSRRYRVRVLVCAPSNSALDEIVL 391
LV A N + + + DG F G + P VV R R + A + L+E+V
Sbjct: 748 ILVCAPSNAAVDELVVRLRDGVFNFKGERITPSVV---RLGRSDAVNSAVRDLTLEELVD 804
Query: 392 RLLNTGI----RDENIRSYTPKIVRIGLKAHHSVNSVAID-----------HLVEQKRDD 436
+ L T + RD +R+ K+V+ S+ S + V +KR++
Sbjct: 805 KQLQTTVQHVARDPEVRAEHTKLVKERDSLRQSLQSTTLSDEEFTQMESRLREVNKKRNE 864
Query: 437 SAA--DKQKHGAT------RKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVI 488
A D+Q+ A +R +++ ILN + I+CSTLS S L+ L F+ VI
Sbjct: 865 LAKKLDEQRENAAVAYRSRELERRQLQAKILNTSQIICSTLSGSAHDFLASLGITFEKVI 924
Query: 489 IDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYP 548
IDEA Q VE + ++PL GC + +VGDP QLP TV+S A L Y SLF R+Q +P
Sbjct: 925 IDEACQCVELSAIIPLRYGCTKCIMVGDPKQLPPTVLSQTAASLNYDKSLFVRMQEQ-FP 983
Query: 549 --VKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEG 606
+L QYRMHP++ FPS EFY L DG+ + + TR WH F P+ FFDI G
Sbjct: 984 DSAYLLDVQYRMHPDISRFPSAEFYRSRLHDGAGMLEKNTRPWHSEVPFSPYRFFDI-VG 1042
Query: 607 KESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKET 666
K Q S S N E VL + L+ M P + ++ +ISPY+ Q++ ++ F +
Sbjct: 1043 KHQQHESSRSLYNRAEAQVVLEMVDHLMYMLPPKEFRGRIGVISPYKEQIRTLKDIFAKK 1102
Query: 667 FGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILV 726
+G + VD TVDG QG+EK++ I SCVRAS+ ++GFL+D RRMNV +TRA++++ +
Sbjct: 1103 YGRQIWNEVDFNTVDGYQGQEKEIIIMSCVRASETGNVGFLSDVRRMNVALTRARTTLWI 1162
Query: 727 VGCASTLREDKHWNNLVKSA 746
+G +L +K W+ L++ A
Sbjct: 1163 LGNQKSLMRNKVWSRLLQDA 1182
>gi|346325571|gb|EGX95168.1| tRNA-splicing endonuclease, putative [Cordyceps militaris CM01]
Length = 2040
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 246/814 (30%), Positives = 365/814 (44%), Gaps = 176/814 (21%)
Query: 21 ILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKAQI 80
IL WD F + N + KVD Y + Y TF PLL E
Sbjct: 1100 ILAWDIFH--GGNDPPNGPKACKVD----------TRYPNPAAYRDTFFPLLASEAWRAF 1147
Query: 81 IQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEA--DEVESISPNDLLLLSKEEFKEGS 138
+ KDE Q + +++ D + + T E + I D+LL+S++E
Sbjct: 1148 VTAKDEVTAQAFGIKITSR-ASVDSYLEITFTLEVALNRERGIGEGDILLVSEDEN---- 1202
Query: 139 TFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSAVEKRL 198
P A HC A + RL Y V I + + L +LI +++ +
Sbjct: 1203 --PLNNPSA--RHCLARVHRL-TYKKDRVEIIFRVTSRGNPL--AVALIPNTM------M 1249
Query: 199 FSLKICSLSTIAREYLALRSVGSLPFKDLILSAS---------EKSSGSQDQSWKIPGLL 249
+KI +++TI REY AL S+ D IL A E+ + Q +W++
Sbjct: 1250 NGIKITNMTTIEREYAALESLQYFDLMDEILKAEPSPILKYGDERVTNYQS-NWQL---- 1304
Query: 250 HEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGG 309
N Q ++ F LIQGPPGTGKT+TI+ ++ A+L A+ +KG
Sbjct: 1305 --------NRGQALSVLGAQENDGFTLIQGPPGTGKTKTIVAMVGALLSGQLAQAPAKG- 1355
Query: 310 LREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNSS 369
P+ G ++P V N
Sbjct: 1356 -----------------------------------TPV----------GVPVRPGVANQP 1370
Query: 370 RRYRVR-VLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLK--AHHSVNSVAI 426
R + +LVCAPSN+A+DE+V RL GI + ++ T ++R+G +V V +
Sbjct: 1371 AGSRPKKLLVCAPSNAAVDELVTRL-KRGITTISGKTKTINVLRLGRSDAISAAVKDVTL 1429
Query: 427 DHLVE---------------------------------QKRDDSAADKQKHGATRK---- 449
D LV + R D A +K+ A K
Sbjct: 1430 DELVRVRMQGDSSKDKAKAIREKLHERASEIKEQLGILRPRLDEANEKEDQDARNKLLRQ 1489
Query: 450 -----------------DRDSIRSA--------------ILNEAVIVCSTLSFSGSALLS 478
DRDS SA ILN A ++C+TLS SG +
Sbjct: 1490 FDDLKREQRDIGKQIEADRDSGNSAAREVEMKRRQIQQEILNNAHVLCATLSGSGHEMFR 1549
Query: 479 KLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSL 538
L+ F+ VIIDEAAQ VE + L+PL GC + LVGDP QLP TV+S A GY SL
Sbjct: 1550 NLDVEFETVIIDEAAQCVELSALIPLKYGCCKCILVGDPKQLPPTVLSQSAARFGYDQSL 1609
Query: 539 FKRLQRAGYP--VKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFG 596
F R+Q+ +P V +L QYRMHPE+ FPS+EFY+ L DG D+ + WH+ G
Sbjct: 1610 FVRMQQ-NHPKSVHLLDMQYRMHPEISLFPSKEFYEGQLRDGQDMAGLRQQPWHKSALLG 1668
Query: 597 PFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQV 656
P+ FFD+ +E G S +N E++ L ++ + Y + ++ II+PY+ Q+
Sbjct: 1669 PYRFFDVQGVQERGHRGQ-SLVNTRELEVALQMYDRFRKEYSECNLVGKIGIITPYKAQL 1727
Query: 657 KQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVG 716
+ ++RF+ +G + +++ T D QGRE ++ IFSCVRAS IGF+ D RRMNVG
Sbjct: 1728 FELRKRFRARYGEDICDIIEFNTTDAFQGRECEIIIFSCVRASATGGIGFMTDIRRMNVG 1787
Query: 717 ITRAKSSILVVGCASTLREDKHWNNLVKSAEKQD 750
+TRAKSS+ ++G + L + + W L++ A+ +D
Sbjct: 1788 LTRAKSSLWILGDSRALVQGEFWKKLIEDAKSRD 1821
>gi|294655237|ref|XP_002770105.1| DEHA2B08822p [Debaryomyces hansenii CBS767]
gi|199429794|emb|CAR65475.1| DEHA2B08822p [Debaryomyces hansenii CBS767]
Length = 1968
Score = 306 bits (783), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 242/779 (31%), Positives = 369/779 (47%), Gaps = 72/779 (9%)
Query: 52 REVKDTYKDVDDYLATFEPLLFEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGFHLPSV 111
RE KD Y D DY T EPLL E I K + ++L ++ DGF
Sbjct: 1113 RETKDVYTDAKDYTKTIEPLLMLECWQGIQSAKQTGQESPFEL-MIGSRTSCDGFFDVYA 1171
Query: 112 TYEADEVE--SISPNDLLLLSKEEFKEGSTFPTTYAFALVEHCQANLLRLRMYLAGEVIH 169
+ + E+ I +DLL+L ++ S A+ L ++R E+
Sbjct: 1172 SVKKSELNDRKIGDSDLLVLGDCSDQQFSNLNKVAAYIKSPQTTTCLAKVR-----EIKS 1226
Query: 170 INKDAVK-SQRLLNIHSLITSSVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDL- 227
N D + R+ S++ + +K + ++++ + TI REY +L+ LP+ DL
Sbjct: 1227 ANADFCDITLRVYPQGSMM--GILTPKKLMTAMRVMQMVTIEREYSSLKG---LPYYDLC 1281
Query: 228 --ILSASEKSSGSQDQSWKIPGLLHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGK 285
ILS+ + S +L Y + N SQ +AI F LIQGPPGTGK
Sbjct: 1282 DSILSSRPNNPIDISDS-DADRMLSLY---DVNRSQAKAIMGSYNSDGFSLIQGPPGTGK 1337
Query: 286 TQTILGLL-----------SAILHATPARVHSKGGLREIKRGPEL----PMHE------- 323
T+TILG++ + I+ A + G + GP++ P +
Sbjct: 1338 TKTILGIVGYSISHQQKEGTIIIPKGIADNNPLAGSKGESNGPKILICAPSNAAVDELVL 1397
Query: 324 ------KYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNSSRRYRVRV- 376
K + P +V D I D +L+ + VN++ ++R+
Sbjct: 1398 RLRKGVKTSKGESIIPRVVRLGRSDAINAAVKDLTLEELVDKQLQVQSVNTTSDPKIRME 1457
Query: 377 -LVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQKRD 435
C L E +R N+ K++ I L+ + + L EQ+
Sbjct: 1458 HTKCIAERDRLRE--------ELRKPNLNEEEIKVLEIQLRDTNKSRNELAKKLDEQRER 1509
Query: 436 DSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQA 495
S A + K +R +++ ILN + I+CSTLS S L+ ++ FD VIIDEA Q+
Sbjct: 1510 ISIAYRTKE----IERRQLQAKILNSSQIICSTLSGSAHDFLANMSMKFDQVIIDEACQS 1565
Query: 496 VEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYP--VKMLK 553
VE + ++PL GCK+ +VGDP QLP TV+S A Y SLF R+Q+ YP V +L
Sbjct: 1566 VELSAIIPLRYGCKKCIMVGDPNQLPPTVLSQAAASFNYEQSLFVRMQKM-YPESVYLLD 1624
Query: 554 TQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAG 613
QYRMHP + FPS EFY L DG + +R WH+ P+ FFDI GK Q
Sbjct: 1625 VQYRMHPAISKFPSSEFYFSRLHDGEGMAAKNSRPWHKDYPLSPYMFFDI-VGKHQQNEL 1683
Query: 614 SGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQK 673
S S N E L L KLI + PQ + S ++ IISPY+ Q++ ++ FK +G
Sbjct: 1684 SRSLFNYAEAQVALELVDKLIQILPQTEFSGRIGIISPYKEQIRTLKDVFKRKYGHSILS 1743
Query: 674 VVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTL 733
+D TVDG QG+EK++ I SCVRAS+ ++GFL+D RRMNV +TRA++S+ ++G +L
Sbjct: 1744 EIDFNTVDGFQGQEKEIIIMSCVRASESGNVGFLSDVRRMNVALTRARTSLWILGNKKSL 1803
Query: 734 REDKHWNNLVKSAEKQDCLFRVSKPYASFFSDENLESMRKNATTDNVQGADGHVPHDDE 792
+ W L+ A +++ VS+ + F + + + AT D + + P +DE
Sbjct: 1804 SRNTVWKRLLDDAAERNA---VSEAHPGFL--KKIFKLPPQATPDTKKIENKREPENDE 1857
>gi|207342692|gb|EDZ70377.1| YLR430Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 955
Score = 305 bits (782), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 232/786 (29%), Positives = 377/786 (47%), Gaps = 102/786 (12%)
Query: 19 KIILGWDYFRLVKESQERNDKNSKKVDRGKLG-LREVKDTYKDVDDYLATFEPLLFEEVK 77
+IIL WDY R NS+ D +G +VKD + DY +PLL E
Sbjct: 77 EIILQWDYTR-----------NSEYPDDEPIGNYSDVKDFFNSPADYQKVMKPLLLLESW 125
Query: 78 AQIIQKKDEEEVQEWKLRLVMECGEADGFHL-PSVTYEADEVESISPNDLLLLSK-EEFK 135
+ +D E+ + + + + +D + + SV + + IS +DL++++ +F+
Sbjct: 126 QGLCSSRDREDYKPFSIIVGNRTAVSDFYDVYASVAKQVIQDCGISESDLIVMAYLPDFR 185
Query: 136 EGSTFPTTYAFALVEH-CQANLLRLRMYLAGEV-----IHINKDAVKSQRLLNIHSLITS 189
++ F +H C A + L+ G V IH N HS S
Sbjct: 186 PDKRL-SSDDFKKAQHTCLAKVRTLKNTKGGNVDVTLRIHRN------------HSF--S 230
Query: 190 SVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLL 249
+ ++ +K+ ++TI REY L + IL A + D +
Sbjct: 231 KFLTLRSEIYCVKVMQMTTIEREYSTLEGLEYYDLVGQILQAKPSPPVNVDAAE------ 284
Query: 250 HEYIKENH--NASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSK 307
E +K+++ N SQ EAI + ++ F LIQGPPGTGKT+TILG++ L A +
Sbjct: 285 IETVKKSYKLNTSQAEAIVNSVSKEGFSLIQGPPGTGKTKTILGIIGYFLSTKNASSSN- 343
Query: 308 GGLREIKRGPELPMHEKYNHWGRASPWLVGA--NPRDNIMPIDGDDGFFPTTGNELKPEV 365
+ + P + L+ A N + + + G + G++ KP++
Sbjct: 344 -----VIKVPLEKNSSNTEQLLKKQKILICAPSNAAVDEICLRLKSGVYDKQGHQFKPQL 398
Query: 366 VNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRS-------------------- 405
V R R V+ A + L+E+V + + G R+ IR+
Sbjct: 399 V---RVGRSDVVNVAIKDLTLEELVDKRI--GERNYEIRTDPELERKFNNAVTKRRELRG 453
Query: 406 -------------YTPKIVRIGLKAHHSVNSVAIDHLVEQKRDDSAADKQKHGATRKDRD 452
T I ++ LK + ++ + D ++K+ ++RD
Sbjct: 454 KLDSESGNPESPMSTEDISKLQLKIRE------LSKIINELGRDRDEMREKNSVNYRNRD 507
Query: 453 ----SIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGC 508
+ ++ IL + I+CSTLS S +L+ + FD VIIDEA Q E ++++PL G
Sbjct: 508 LDRRNAQAHILAVSDIICSTLSGSAHDVLATMGIKFDTVIIDEACQCTELSSIIPLRYGG 567
Query: 509 KQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSR 568
K+ +VGDP QLP TV+S A + Y SLF R+++ P +L QYRMHP + FPS
Sbjct: 568 KRCIMVGDPNQLPPTVLSGAASNFKYNQSLFVRMEKNSSPY-LLDVQYRMHPSISKFPSS 626
Query: 569 EFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLL 628
EFY L+DG ++ R WH+ P+ FFDI G++ Q A + S+ N++E+ +
Sbjct: 627 EFYQGRLKDGPGMDILNKRPWHQLEPLAPYKFFDIISGRQEQNAKTMSYTNMEEIRVAIE 686
Query: 629 LFHKLISMYP-QLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGRE 687
L L + ++ + ++ IISPYR Q+++ ++ F FG K +D T+DG QG+E
Sbjct: 687 LVDYLFRKFDNKIDFTGKIGIISPYREQMQKMRKEFARYFGGMINKSIDFNTIDGFQGQE 746
Query: 688 KDVAIFSCVRASD-KKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSA 746
K++ + SCVRA D K S+GFL D+RRMNV +TRAK+SI V+G +L + K W +L++ A
Sbjct: 747 KEIILISCVRADDTKSSVGFLKDFRRMNVALTRAKTSIWVLGHQRSLAKSKLWRDLIEDA 806
Query: 747 EKQDCL 752
+ + CL
Sbjct: 807 KDRSCL 812
>gi|367021720|ref|XP_003660145.1| hypothetical protein MYCTH_2298080 [Myceliophthora thermophila ATCC
42464]
gi|347007412|gb|AEO54900.1| hypothetical protein MYCTH_2298080 [Myceliophthora thermophila ATCC
42464]
Length = 2059
Score = 305 bits (781), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 241/803 (30%), Positives = 372/803 (46%), Gaps = 160/803 (19%)
Query: 21 ILGWDYFRLVKESQERNDK-NSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKAQ 79
IL WD F E ND N + DR V DTY D Y TF PLL E
Sbjct: 1117 ILEWDIF------HEGNDPPNGYRCDR-------VSDTYPDPISYKQTFFPLLINEAWRS 1163
Query: 80 IIQKKDEEEVQEWKLRLVMECGEADGFH--LPSVTYEADEVESISPNDLLLLSKEEFKEG 137
+ KDE + + ++ V+ D F SV + + +S D++++S+
Sbjct: 1164 FVTAKDEATSKPFGIK-VLSRMTVDKFMEVTASVPAQVSKDRGLSEGDIVIISQ------ 1216
Query: 138 STFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSAVEKR 197
P L HC + + + Y V + + K ++L +L+ S V
Sbjct: 1217 GHDPLNQPQEL--HCLSRIWKT-TYKKDTVEVVYRLNAKGNQIL--PALLPGSEFNV--- 1268
Query: 198 LFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIKENH 257
+KI +++TI REY AL S+ D +L A + S + G++ Y
Sbjct: 1269 ---VKITNMTTIEREYAALESLQYYDLMDEVLKA-QPSPMLTFGDEAVRGVMENY---QL 1321
Query: 258 NASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLREIKRGP 317
N Q AI F LIQGPPGTGKT+TI+ ++ +L G L+
Sbjct: 1322 NPGQARAILNAKENDGFTLIQGPPGTGKTKTIVAMVGCLL---------TGVLKS----- 1367
Query: 318 ELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNSSRRYRVRVL 377
N +P+ +P ++++ ++L
Sbjct: 1368 -----------------------SSNAVPLS-------------RPGAASANQAPSKKLL 1391
Query: 378 VCAPSNSALDEI-------------------VLRL-----LNTGIRD------------E 401
VCAPSN+A+DE+ VLRL +N ++D
Sbjct: 1392 VCAPSNAAVDELVLRLKAGVKTMNGTFHKIEVLRLGRSDAINAAVKDVTLDELVKARLDS 1451
Query: 402 NIRSYTP---------------KI--VRIGLKAHHSVNSVAIDHLVEQKRDDSAADKQKH 444
I + P KI +R L+A + ++ A + Q+ D +Q H
Sbjct: 1452 EINNSGPSDREKLHQEAGQLKEKIAELRPQLEAARASDNRAFTMKL-QREFDELKRRQAH 1510
Query: 445 GATRKD----------------RDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVI 488
+ D R I+ IL++A ++C+TLS SG + LN F+ VI
Sbjct: 1511 IGAQIDANKNDGNTFAREVEIKRRQIQQEILDKAQVLCATLSGSGHEMFKNLNVEFETVI 1570
Query: 489 IDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRA-GY 547
IDEAAQ VE + L+PL GC + LVGDP QLP TV+S A GY SLF R+Q+
Sbjct: 1571 IDEAAQCVELSALIPLKYGCSKCILVGDPKQLPPTVLSQSAARYGYDQSLFVRMQKNHAK 1630
Query: 548 PVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGK 607
V +L QYRMHPE+ FPS+EFY+ L+DG+D+ + WHE GP+ FFD+ +G
Sbjct: 1631 DVHLLDMQYRMHPEISRFPSQEFYEGLLQDGADMGRLRLQPWHESELLGPYRFFDV-KGS 1689
Query: 608 ESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETF 667
+S+ + S +N +E+ + L+ + + Y +++ ++ II+PY+ Q+ + ++RF E +
Sbjct: 1690 QSRGPKNQSLVNEEELKVAMQLYRRFRTDYGKVELKGKIGIITPYKAQLLRLRQRFTEKY 1749
Query: 668 GVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVV 727
G + ++ T D QGRE ++ IFSCVRAS IGF+ D RRMNVG+TRAKSS+ ++
Sbjct: 1750 GEGITEEIEFNTTDAFQGRECEIIIFSCVRASPTGGIGFMTDIRRMNVGLTRAKSSLWIL 1809
Query: 728 GCASTLREDKHWNNLVKSAEKQD 750
G + L + + W+ L++ A+++D
Sbjct: 1810 GDSRALVQGEFWSKLIEDAKRRD 1832
>gi|225558060|gb|EEH06345.1| DEAD-box type RNA helicase [Ajellomyces capsulatus G186AR]
Length = 2150
Score = 305 bits (781), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 237/777 (30%), Positives = 375/777 (48%), Gaps = 103/777 (13%)
Query: 19 KIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKA 78
+ +L W++F + G+ V +T+ D DY TFEPLL E
Sbjct: 1086 RTLLSWEFFA----------NGDLPPNSGRTDYSLVSNTFADAADYQKTFEPLLILESWQ 1135
Query: 79 QIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTY----EADEVESISPNDLLLLSKEEF 134
K+E + ++++ V D F + +T+ EA ++ ++ +DL+LLSK
Sbjct: 1136 SFQSAKEEGGFKAFEIK-VSNRMSVDAF-VEVITFMQPTEAKDL-GLAESDLVLLSK--- 1189
Query: 135 KEGSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSAV 194
S P++ A HC A + R +VK + ++ I I S +
Sbjct: 1190 ---SNNPSSDEKA--PHCLARIFR---------------SVKKKGMMEISYRINPSNPLM 1229
Query: 195 EK-----RLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLL 249
L ++++ SL+ + REY AL ++ + I+ K+ S ++ + L
Sbjct: 1230 SSILPGASLHAVRVASLTPVEREYGALMALKYYDLSEEII----KAKPSPILNYSLESLK 1285
Query: 250 HEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPA-----RV 304
N +Q +A+ + AF LIQGPPG+GKT+TI+ L+ AIL A R
Sbjct: 1286 PIIDTYKVNPAQAKAVRSAMDNDAFTLIQGPPGSGKTKTIVALVGAILTPVFAEQKITRP 1345
Query: 305 HSKGGLREIKRGPELPMHEKYNHWGRASPWLVGA--NPRDNIMPIDGDDGFFPTTGNELK 362
S G R R + LV A N + + + +G ++G +
Sbjct: 1346 GSSGDFRPATRA------------TTSGKLLVCAPSNAAVDELVMRFKEGVITSSGQKHN 1393
Query: 363 PEVVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIR----DENIRSYTP---------- 408
VV R + V + LDE+V L R ++++++Y
Sbjct: 1394 ISVVRLGRSDAINSNVM---DVTLDELVNAKLGQNGRKNGSEKDLQTYYSEHKGACTQFN 1450
Query: 409 ----KIVRIGLKAHHSVNSVAIDH-LVEQKRD------DSAADKQKHGATRKD--RDSIR 455
++ + K H + + + L+++K+ D+A D + A D R ++
Sbjct: 1451 EIRERLDQCRAKGQHVPSELEREFDLLKRKKAQLSQAIDNARDSNQAAARNADLARKKVQ 1510
Query: 456 SAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVG 515
I+N + ++C+TLS SG + L+ F+ V+IDEAAQ++E + L+PL GC + LVG
Sbjct: 1511 QEIINGSHVICATLSGSGHEMFQSLSIEFETVVIDEAAQSIELSALIPLKYGCSKCILVG 1570
Query: 516 DPVQLPATVISPVAEHLGYGTSLFKRLQRAGYP--VKMLKTQYRMHPEVRSFPSREFYDE 573
DP QLP TV+S VA Y SLF R+Q A +P V +L TQYRMHPE+ FPS FYD
Sbjct: 1571 DPKQLPPTVLSKVASRFQYEQSLFVRMQ-ANHPKDVHLLDTQYRMHPEISRFPSAAFYDG 1629
Query: 574 ALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKL 633
L+DG D+ R WH GP+ FFD+ S P G S +N+ E+ + L+ +L
Sbjct: 1630 RLKDGPDMAKLRVRPWHSSELLGPYRFFDVQGLHSSAPKGH-SLVNLAELRVAMKLYERL 1688
Query: 634 ISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIF 693
Y ++ II+PY+ Q+++ + +F +G V+ T D QGRE +V IF
Sbjct: 1689 TIDYMTYDFKGKIGIITPYKGQLREMKNQFANKYGNSIFTTVEFNTTDAFQGRECEVIIF 1748
Query: 694 SCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQD 750
SCVRAS+ + IGFLAD RRMNVG+TRAKSS+ V+G + +L + + WN L+ A+ ++
Sbjct: 1749 SCVRASN-RGIGFLADIRRMNVGLTRAKSSLWVLGNSQSLVQGEFWNGLITDAQSRN 1804
>gi|146421053|ref|XP_001486478.1| hypothetical protein PGUG_02149 [Meyerozyma guilliermondii ATCC 6260]
Length = 1359
Score = 305 bits (781), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 242/740 (32%), Positives = 357/740 (48%), Gaps = 90/740 (12%)
Query: 52 REVKDTYKDVDDYLATFEPLLFEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGFH--LP 109
+E K Y+DV DY+ EPLL E II K+ + + + LV DGF
Sbjct: 488 KETKGKYEDVKDYVKAMEPLLMLECWQGIISSKETSQELPFPM-LVGSRTSVDGFFDVYA 546
Query: 110 SVTYEADEVESISPNDLLLLS----------KEEFKEGSTFPTTYAFALVEHCQ-ANL-- 156
S+ + I+ +DLL+LS KE + +T A V + AN
Sbjct: 547 SIEKKVLNDRKITDSDLLVLSYMDNALQRSEKELATHIKSSKSTTCLAKVREIKSANADY 606
Query: 157 --LRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSAVEKRLFSLKICSLSTIAREYL 214
+ LR++ G ++ + L SV + +K+ + TI REYL
Sbjct: 607 ADVTLRVFPQGTMMGV---------------LTPKSV------VIGMKVMQMITIEREYL 645
Query: 215 ALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIKENHNASQLEAIHEGLLRKAF 274
+LR + IL A + + K+ +++ Y N SQ AI R F
Sbjct: 646 SLRGLEYYNLCPAILRAFP-TGPIEVPKQKLNDVMNNY---KVNESQANAIISTHNRSGF 701
Query: 275 VLIQGPPGTGKTQTILGLLSAIL-HATPARVHSKGGLREIKRGPELPMHEKYNHWGRASP 333
LIQGPPGTGKT+TILG++ L P GL E+ P +S
Sbjct: 702 SLIQGPPGTGKTKTILGIVGYNLSQDVPL------GLIEVDGQQGKPQT--------SSK 747
Query: 334 WLVGA--NPRDNIMPIDGDDGFFPTTGNELKPEVVNSSRRYRVRVLVCAPSNSALDEIVL 391
LV A N + + + DG F G + P VV R R + A + L+E+V
Sbjct: 748 ILVCAPSNAAVDELVVRLRDGVFNFKGERITPSVV---RLGRSDAVNSAVRDLTLEELVD 804
Query: 392 RLLNTGI----RDENIRSYTPKIVRIGLKAHHSVNSVAID-----------HLVEQKRDD 436
+ L T + RD +R+ K+V+ S+ S + V +KR++
Sbjct: 805 KQLQTTVQHVARDPEVRAEHTKLVKERDSLRQSLQSTTLLDEEFTQMELRLREVNKKRNE 864
Query: 437 SAA--DKQKHGAT------RKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVI 488
A D+Q+ A +R +++ ILN + I+CSTLS S L+ L F+ VI
Sbjct: 865 LAKKLDEQRENAAVAYRSRELERRQLQAKILNTSQIICSTLSGSAHDFLASLGITFEKVI 924
Query: 489 IDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYP 548
IDEA Q VE + ++PL GC + +VGDP QLP TV+S A L Y SLF R+Q +P
Sbjct: 925 IDEACQCVELSAIIPLRYGCTKCIMVGDPKQLPPTVLSQTAASLNYDKSLFVRMQEQ-FP 983
Query: 549 --VKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEG 606
+L QYRMHP++ FPS EFY L DG+ + + TR WH F P+ FFDI G
Sbjct: 984 DSAYLLDVQYRMHPDISRFPSAEFYRSRLHDGAGMLEKNTRPWHSEVPFSPYRFFDI-VG 1042
Query: 607 KESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKET 666
K Q S S N E VL + L+ M P + ++ +ISPY+ Q++ ++ F +
Sbjct: 1043 KHQQHESSRSLYNRAEAQVVLEMVDHLMYMLPPKEFRGRIGVISPYKEQIRTLKDIFAKK 1102
Query: 667 FGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILV 726
+G + VD TVDG QG+EK++ I SCVRAS+ ++GFL+D RRMNV +TRA++++ +
Sbjct: 1103 YGRQIWNEVDFNTVDGYQGQEKEIIIMSCVRASETGNVGFLSDVRRMNVALTRARTTLWI 1162
Query: 727 VGCASTLREDKHWNNLVKSA 746
+G +L +K W+ L++ A
Sbjct: 1163 LGNQKSLMRNKVWSRLLQDA 1182
>gi|367042072|ref|XP_003651416.1| hypothetical protein THITE_2111680 [Thielavia terrestris NRRL 8126]
gi|346998678|gb|AEO65080.1| hypothetical protein THITE_2111680 [Thielavia terrestris NRRL 8126]
Length = 2051
Score = 305 bits (781), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 242/805 (30%), Positives = 359/805 (44%), Gaps = 163/805 (20%)
Query: 21 ILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKAQI 80
IL WD F E ND + G V DTY D Y TF PLL E
Sbjct: 1113 ILEWDIF------HEGNDPPNGYRCEG------VSDTYTDPHSYKQTFFPLLINEAWRSF 1160
Query: 81 IQKKDEEEVQEWKLRLVMECGEADGFH--LPSVTYEADEVESISPNDLLLLSKEEFKEGS 138
+ KDE + + ++ V+ D F + SV + + +S D+++ SK E +
Sbjct: 1161 VTAKDEATSKPFGIK-VLNRTAVDKFVEIVASVPAQVSKDRGLSEGDIVIFSKGE--DPL 1217
Query: 139 TFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSAVEKRL 198
PT HC + + + KD V+ LN V
Sbjct: 1218 NQPTEL------HCLSRIWK---------TTYKKDTVEVLYRLNARGNQILPVLLPGSEF 1262
Query: 199 FSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIKENHN 258
+KI +++TI REY AL S+ D +L A + + + G++ Y N
Sbjct: 1263 HVVKITNMTTIEREYAALESLQYYDLMDEVLKAQPSPMLTFGEE-AVRGVMQNY---QLN 1318
Query: 259 ASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLREIKRGPE 318
Q AI F LIQGPPGTGKT+TI+ ++ +L T S GG+ + G
Sbjct: 1319 PGQARAILNAKENDGFTLIQGPPGTGKTKTIVAMVGCLL--TGVLKSSNGGVALARPG-- 1374
Query: 319 LPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNSSRRYRVRVLV 378
GA P G P+ ++LV
Sbjct: 1375 ------------------GAAPA----------GSAPSK-----------------KLLV 1389
Query: 379 CAPSNSALDEI-------------------VLRL-----LNTGIRDENIRSYTPKIVRIG 414
CAPSN+A+DE+ VLRL +N ++D + ++VRI
Sbjct: 1390 CAPSNAAVDELVLRLKAGVKTMNGTTHKIEVLRLGRSDAINAAVKDVTLD----ELVRIR 1445
Query: 415 LKA-------------HHSVNSV---------------AIDH----LVEQKRDDSAADKQ 442
++A H + A D+ + Q+ D +Q
Sbjct: 1446 MEAEINNGGPSDREKLHQEAGELKEKVAELKPQLEAARASDNRALAMKLQREFDELKRRQ 1505
Query: 443 KHGATRKD----------------RDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDV 486
H + D R I+ IL++A ++C+TLS SG + LN F+
Sbjct: 1506 AHIGAKIDAQKSDGNTFAREVEIKRRQIQQDILDKAQVLCATLSGSGHEMFKNLNVEFET 1565
Query: 487 VIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRA- 545
VIIDEAAQ VE + L+PL GC + LVGDP QLP TV+S A GY SLF R+Q+
Sbjct: 1566 VIIDEAAQCVELSALIPLKYGCSKCILVGDPKQLPPTVLSQSAARYGYDQSLFVRMQKNH 1625
Query: 546 GYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHE 605
V +L QYRMHPE+ FPS+ FY+ L+DG+D+ + WH+ GP+ FFD+
Sbjct: 1626 AKDVHLLDMQYRMHPEISRFPSKVFYEGLLQDGADMGKLRLQPWHQSVLLGPYRFFDVKG 1685
Query: 606 GKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKE 665
+E P S +N +E+ L L+ + + Y + ++ II+PY+ Q+ + ++RF E
Sbjct: 1686 SQERGPKNQ-SLVNEEELKVALQLYRRFRTDYSNVDLKGKIGIITPYKAQLFRLRQRFTE 1744
Query: 666 TFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSIL 725
+G + ++ T D QGRE ++ IFSCVRAS IGF+ D RRMNVG+TRAKSS+
Sbjct: 1745 KYGEGITEEIEFNTTDAFQGRECEIIIFSCVRASPTGGIGFMTDIRRMNVGLTRAKSSLW 1804
Query: 726 VVGCASTLREDKHWNNLVKSAEKQD 750
++G + L + + W L++ A+++D
Sbjct: 1805 ILGDSRALVQGEFWAKLIEDAKQRD 1829
>gi|242781508|ref|XP_002479814.1| tRNA-splicing endonuclease, putative [Talaromyces stipitatus ATCC
10500]
gi|218719961|gb|EED19380.1| tRNA-splicing endonuclease, putative [Talaromyces stipitatus ATCC
10500]
Length = 1391
Score = 305 bits (781), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 237/768 (30%), Positives = 367/768 (47%), Gaps = 81/768 (10%)
Query: 19 KIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKA 78
+ +L WD+F + G+ + T++D +Y TFEPLL E
Sbjct: 369 RTLLEWDFF----------ANGDLPPNSGRTDYSLITSTFRDPVEYQRTFEPLLVLEAWQ 418
Query: 79 QIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADEVE--SISPNDLLLLSKEEFKE 136
K+E + +++ + + + A +++ + D++LLSK
Sbjct: 419 GFQSAKEEANFKPFEITVATRLSVDSFMEVSTSLKSAADLKDFGLGEADIVLLSK----- 473
Query: 137 GSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHIN--KDAVKSQRLLNIHSLITSSVSAV 194
S P A HC G + IN K V+ +N S + SS+ A
Sbjct: 474 -SRDPANDKSA--PHC-----------LGRISGINRKKGNVEVSYRVNPGSAMVSSL-AP 518
Query: 195 EKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIK 254
L++++I SL+ + REY AL ++ + I+ A ++S P L+ Y
Sbjct: 519 GVTLWAVRITSLTPLEREYGALMALQYYDLCEEIIKAKPSPILKYNESSLKP-LVDNY-- 575
Query: 255 ENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLREIK 314
N N +Q +AI L AF LIQGPPG+GKT+TI+ L+ A+L T HS R
Sbjct: 576 -NVNQAQAKAIKSALDNDAFTLIQGPPGSGKTKTIVALVGALLSGTLGNQHSVAISR--- 631
Query: 315 RGPELPMHEKYNHWGRASPWLVGANPRD---NIMPIDGDDGFFPTTGNELKPEVVNSSRR 371
P P + ++ A+ L+ P + + + + G G K V+ R
Sbjct: 632 --PSAPQTKAHSANATATKKLLVCAPSNAAVDELVMRFKAGIKTLNGQSEKLSVIRLGRS 689
Query: 372 YRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKI-------------VRIGLKAH 418
+ V + LDE+V LN + + + KI R L
Sbjct: 690 DAINTNVL---DVTLDELVNARLNQSVPKPSEDNNPQKIFEDHKSTDTAFKEARSKLDQF 746
Query: 419 HSVNSVAID------HLVEQKRD------DSAADKQKHGATRKD--RDSIRSAILNEAVI 464
+ D L+++KR D+A D+ A D R I+ I++ A +
Sbjct: 747 RAKGQTPPDDLLREFELLKKKRTQLSQEIDNARDRNNAIARNNDLTRRRIQQEIVDGAHV 806
Query: 465 VCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATV 524
+C+TLS SG + L+ F+ VIIDEAAQ++E + L+PL GC + LVGDP QLP TV
Sbjct: 807 ICATLSGSGHEMFQNLSIDFETVIIDEAAQSIELSALIPLKYGCAKCILVGDPKQLPPTV 866
Query: 525 ISPVAEHLGYGTSLFKRLQRAGYP--VKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVE 582
+S A Y SLF R+Q + +P V +L QYRMHP + FPS FYD L+DG D+
Sbjct: 867 LSKEASRFQYEQSLFVRMQ-SNHPNDVHLLDIQYRMHPAISRFPSVTFYDGLLQDGPDMA 925
Query: 583 DYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKS 642
R WH + P+ FFD+ +S G S IN+ E++ + L+ +L++ + +
Sbjct: 926 KLRARPWHNSQLLSPYRFFDVQGLHQSASKGH-SLINVAELNVAMQLYERLLTDFKSIDF 984
Query: 643 SSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKK 702
S ++ II+PY+ Q+++ + RF +G V+ T D QGRE +V IFSCVRAS+ K
Sbjct: 985 SGKIGIITPYKGQLREMKIRFAAKYGNSIFSKVEFNTTDAFQGRESEVIIFSCVRASN-K 1043
Query: 703 SIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQD 750
IGFL+D RRMNVG+TRAKSS+ V+G + +L + + W L+ A +++
Sbjct: 1044 GIGFLSDIRRMNVGLTRAKSSLWVLGNSQSLIQGEFWGKLITDARQRN 1091
>gi|322709665|gb|EFZ01241.1| putative SEN1 protein [Metarhizium anisopliae ARSEF 23]
Length = 2049
Score = 305 bits (781), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 241/775 (31%), Positives = 363/775 (46%), Gaps = 88/775 (11%)
Query: 16 RFCKIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEE 75
R IL WD F + ND + EV Y D Y ATF PLL E
Sbjct: 1112 RLHNTILAWDIF------HQGNDPPNGP------AASEVATKYPDPRSYQATFFPLLASE 1159
Query: 76 VKAQIIQKKDEEEVQEWKLRLVMECGEAD----GFHLPSVTYEADEVESISPNDLLLLSK 131
+ KDE Q + ++L F LP V + +S D+LL+S+
Sbjct: 1160 AWRSFVTAKDEITAQPFGMKLASRASVDSFLEVAFTLPVVQ---NRERGVSEGDILLVSE 1216
Query: 132 EEFKEGSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSV 191
E + + HC A + R+ ++I I + R + +L+ V
Sbjct: 1217 AE--------SPLQNPVSRHCLARVHRI--TYKKDLIEITYRV--ASRNNQLSTLLMPGV 1264
Query: 192 SAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHE 251
+ ++ +KI +++TI REY AL S+ D IL A E S + KI +
Sbjct: 1265 T-----VYGVKITNMTTIEREYAALESLQYYDLMDEILKA-EPSPILRYGEEKISNTMQN 1318
Query: 252 YIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPAR----VHSK 307
+ N Q A+ F LIQGPPGTGKT+TI ++ ++L A+ V
Sbjct: 1319 W---TLNHGQAVAVLGAQDNDGFTLIQGPPGTGKTKTITAMVGSLLSEQLAQASNGVPMG 1375
Query: 308 GGLREIKRGPELPMHEKYNHWGRASPWLVGA--NPRDNIMPIDGDDGFFPTTGNELKPEV 365
LR + +P + GR LV A N + + + G ++G K +
Sbjct: 1376 APLRPLAGA--IPAGQ-----GRPKKLLVCAPSNAAVDELVLRLKSGVKTSSG---KTKP 1425
Query: 366 VNSSRRYRVRVLVCAPSNSALDEIVL-RLLNTGIRDE-------------NIRSYTPKIV 411
+N R R + A + LDE+V R+ +D+ IR +I
Sbjct: 1426 INVLRLGRSDAINAAVKDVTLDELVRNRMEGDNTKDKAKAERDKLHGDAAKIREELAEIR 1485
Query: 412 RIGLKAHHSVNSVA-------IDHLVEQ-----KRDDSAADKQKHGATRKD--RDSIRSA 457
++ +A N + D L Q K+ D+ D A + R ++
Sbjct: 1486 QLLDEARAQDNRITQNTLSRKFDELKRQQMNIGKQIDANKDSGNSLAREMEMRRRQVQQE 1545
Query: 458 ILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDP 517
ILN A ++C+TLS SG + L+ F+ VIIDEAAQ VE + L+PL GC + LVGDP
Sbjct: 1546 ILNSAHVLCATLSGSGHEMFRNLDVEFETVIIDEAAQCVELSALIPLKYGCCKCILVGDP 1605
Query: 518 VQLPATVISPVAEHLGYGTSLFKRLQRAGYP--VKMLKTQYRMHPEVRSFPSREFYDEAL 575
QLP TV+S A GY SLF R+Q+ +P V +L QYRMHPE+ FPS+EFY+ L
Sbjct: 1606 KQLPPTVLSQSAARFGYDQSLFVRMQQ-NHPKSVHLLDMQYRMHPEISMFPSKEFYEGQL 1664
Query: 576 EDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLIS 635
+DG D+ + WH+ GP+ FFD+ EG + + S +N E+ + ++ +
Sbjct: 1665 QDGQDMLQLRHQPWHQSALLGPYRFFDV-EGVQEKGRKGQSLVNTRELQVAMEMYDRFSK 1723
Query: 636 MYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSC 695
Y Q + ++ II+PY+ Q+ + + RF +G +++ T D QGRE ++ IFSC
Sbjct: 1724 EYKQCDLTGKIGIITPYKAQLFELRNRFTSRYGENITDIIEFNTTDAFQGRECEIIIFSC 1783
Query: 696 VRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQD 750
VRAS IGF+ D RRMNVG+TRAKSS+ ++G + L + + W L++ A+ +D
Sbjct: 1784 VRASSTGGIGFMTDIRRMNVGLTRAKSSLWILGDSRALVQGEFWKKLIEDAKARD 1838
>gi|151940946|gb|EDN59328.1| splicing endonuclease [Saccharomyces cerevisiae YJM789]
Length = 2232
Score = 305 bits (781), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 233/784 (29%), Positives = 377/784 (48%), Gaps = 98/784 (12%)
Query: 19 KIILGWDYFRLVKESQERNDKNSKKVDRGKLG-LREVKDTYKDVDDYLATFEPLLFEEVK 77
+IIL WDY R NS+ D +G +VKD + DY +PLL E
Sbjct: 1119 EIILQWDYTR-----------NSEYPDDEPIGNYSDVKDFFNSPADYQKVMKPLLLLESW 1167
Query: 78 AQIIQKKDEEEVQEWKLRLVMECGEADGFHL-PSVTYEADEVESISPNDLLLLSK-EEFK 135
+ +D E+ + + + + +D + + SV + + IS +DL++++ +F+
Sbjct: 1168 QGLCSSRDREDYKPFSIIVGNRTAVSDFYDVYASVAKQVIQDCGISESDLIVMAYLPDFR 1227
Query: 136 EGSTFPTTYAFALVEH-CQANLLRLRMYLAGEV-----IHINKDAVKSQRLLNIHSLITS 189
++ F +H C A + L+ G V IH N HS S
Sbjct: 1228 PDKRL-SSDDFKKAQHTCLAKVRTLKNTKGGNVDVTLRIHRN------------HSF--S 1272
Query: 190 SVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLL 249
+ ++ +K+ ++TI REY L + IL A + D +
Sbjct: 1273 KFLTLRSEIYCVKVMQMTTIEREYSTLEGLEYYDLVGQILQAKPSPPVNVDAAEI----- 1327
Query: 250 HEYIKENH--NASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSK 307
E +K+++ N SQ EAI + ++ F LIQGPPGTGKT+TILG++ L A +
Sbjct: 1328 -ETVKKSYKLNTSQAEAIVNSVSKEGFSLIQGPPGTGKTKTILGIIGYFLSTKNASSSNV 1386
Query: 308 GGLREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVN 367
+ K K +P +N + + + G + G++ KP++V
Sbjct: 1387 IKVPLEKNSSNTEQLLKKQKILICAP----SNAAVDEICLRLKSGVYDKQGHQFKPQLV- 1441
Query: 368 SSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRS---------------------- 405
R R V+ A + L+E+V + + G R+ IR+
Sbjct: 1442 --RVGRSDVVNVAIKDLTLEELVDKRI--GERNYEIRTDPELERKFNNAVTKRRELRGKL 1497
Query: 406 -----------YTPKIVRIGLKAHHSVNSVAIDHLVEQKRDDSAADKQKHGATRKDRD-- 452
T I ++ LK + ++ + D ++K+ ++RD
Sbjct: 1498 DSESGNPESPMSTEDISKLQLKIRE------LSKIINELGRDRDEMREKNSVNYRNRDLD 1551
Query: 453 --SIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQ 510
+ ++ IL + I+CSTLS S +L+ + FD VIIDEA Q E ++++PL G K+
Sbjct: 1552 RRNAQAHILAVSDIICSTLSGSAHDVLATMGIKFDTVIIDEACQCTELSSIIPLRYGGKR 1611
Query: 511 VFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREF 570
+VGDP QLP TV+S A + Y SLF R+++ P +L QYRMHP + FPS EF
Sbjct: 1612 CIMVGDPNQLPPTVLSGAASNFKYNQSLFVRMEKNSSPY-LLDVQYRMHPSISKFPSSEF 1670
Query: 571 YDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
Y L+DG ++ R WH+ F P+ FFDI G++ Q A + S+ N++E+ + L
Sbjct: 1671 YQGRLKDGPGMDILNKRPWHQLEPFAPYKFFDIISGRQEQNAKTMSYTNMEEIRVAIELV 1730
Query: 631 HKLISMY-PQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKD 689
L + ++ + ++ IISPYR Q+++ ++ F FG K +D T+DG QG+EK+
Sbjct: 1731 DYLFRKFDNKIDFTGKIGIISPYREQMQKMRKEFARYFGGMINKSIDFNTIDGFQGQEKE 1790
Query: 690 VAIFSCVRASD-KKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEK 748
+ + SCVRA D K S+GFL D+RRMNV +TRAK+SI V+G +L + K W +L++ A+
Sbjct: 1791 IILISCVRADDTKSSVGFLKDFRRMNVALTRAKTSIWVLGHQRSLAKSKLWRDLIEDAKD 1850
Query: 749 QDCL 752
+ CL
Sbjct: 1851 RSCL 1854
>gi|403214571|emb|CCK69072.1| hypothetical protein KNAG_0B06440 [Kazachstania naganishii CBS 8797]
Length = 2187
Score = 304 bits (779), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 238/785 (30%), Positives = 370/785 (47%), Gaps = 102/785 (12%)
Query: 20 IILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKAQ 79
+IL WDY N + D+ +VKD ++ V++Y + +PLL E
Sbjct: 1081 VILQWDY----------NRSDEYPTDKRGDSYADVKDAFRSVEEYRSIMKPLLLLECWQG 1130
Query: 80 IIQKKDEEEVQEWKLRLVMECGEADGFHL-PSVTYEADEVESISPNDLLLL--------- 129
+ +D E+ + + + + +D + + SV+ + + S+S +DL++L
Sbjct: 1131 LCSARDREDNRPFSIIVGNRTAVSDFYEVYASVSKQMIQDSSVSESDLIVLAYLPDVRTG 1190
Query: 130 ---SKEEFKEGSTFPTTYA-FALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHS 185
S E FK T A ++H + N + L + IH N H
Sbjct: 1191 EKLSSENFKRAQN--TCLAKVRTIKHTKGNAVDLTLR-----IHRN------------HH 1231
Query: 186 LITSSVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKI 245
S + + ++K+ ++T+ REY L + D IL A + S
Sbjct: 1232 F--SKFLVLRSEIHAVKVMQMTTVEREYQTLEGLEYYDLVDQILLAKPPPAYSLS----- 1284
Query: 246 PGLLHEYIKENH--NASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAIL---HAT 300
P + E +K N+ N SQ EAI +++ F LIQGPPGTGKT+TILG++ L
Sbjct: 1285 PEEI-EVVKNNYKLNKSQAEAIVNTVIKDGFSLIQGPPGTGKTKTILGIIGYFLSTRRTA 1343
Query: 301 PARVHSKGGLREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNE 360
P+ V G K L K +P +N + + + G + G
Sbjct: 1344 PSNVIKIPGE---KATLSLEQQLKKQKILICAP----SNAAVDEICLRLKSGVYDAHGKL 1396
Query: 361 LKPEVVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTG----------------------- 397
+P +V R R V+ A + L+E+V R L+
Sbjct: 1397 FQPNLV---RIGRSDVVNVAIKDLTLEELVERRLSQNSYEFTQNSELDRKFNNAVTKRRQ 1453
Query: 398 IRDE-NIRSYTP-------KIVRIGLKAHHSVNSVAIDHLVEQKRDDSAADKQKHGATRK 449
+RD+ N +P I ++ L+ S I+ L +Q+ + + + +
Sbjct: 1454 LRDQLNAEDGSPVSKLSSEDITKLQLEIREL--SKEINELGKQRDEIREKNSVNYRSRDL 1511
Query: 450 DRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCK 509
R + + IL + I+CSTLS S +L+ L FD VIIDEA Q E + ++PL G K
Sbjct: 1512 HRRNAQVQILANSNIICSTLSGSAHDVLATLGITFDTVIIDEACQCTELSAIIPLRYGGK 1571
Query: 510 QVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSRE 569
+ +VGDP QLP TV+S A + Y SLF R+++ P +L QYRMHP++ SFPS+E
Sbjct: 1572 RCIMVGDPNQLPPTVLSGAASNFKYNQSLFVRMEKNSQPY-LLNVQYRMHPDISSFPSKE 1630
Query: 570 FYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLL 629
FYD L DG +E+ R WH P+ FFDI G++ Q S S+ N +EV L L
Sbjct: 1631 FYDGKLTDGPGMEEINKRPWHSCPPLSPYKFFDIAMGRQEQNLKSMSFTNAEEVRAALKL 1690
Query: 630 FHKLISMYPQ-LKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREK 688
L + + + ++ IISPYR Q+ + + F FG K +D T+DG QG+EK
Sbjct: 1691 IDHLFKKFDNTVNFTGKIGIISPYREQMLRMRREFTRQFGGSITKYIDFNTIDGFQGQEK 1750
Query: 689 DVAIFSCVRASD-KKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAE 747
++ I SCVRA D K S+GFL D+RRMNV TRAK+S+ ++G +L ++K W NL++ A
Sbjct: 1751 EIIIISCVRADDTKSSVGFLKDFRRMNVAFTRAKTSMWILGHQRSLVKNKLWRNLIEDAR 1810
Query: 748 KQDCL 752
++ +
Sbjct: 1811 NRNMI 1815
>gi|384484388|gb|EIE76568.1| hypothetical protein RO3G_01272 [Rhizopus delemar RA 99-880]
Length = 1809
Score = 304 bits (779), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 240/742 (32%), Positives = 367/742 (49%), Gaps = 73/742 (9%)
Query: 54 VKDTYKDVDDYLATFEPLLFEEVKAQIIQKKD---EEEVQEWKLRLVMECGEAD----GF 106
V T+ DY A+FEPLL E AQI + K+ +V E + + C D F
Sbjct: 940 VPTTFSSFKDYRASFEPLLIAEAWAQIQRAKEGLSASDVLE-QCSVTGRCHTNDFVDITF 998
Query: 107 HLPSVTYEADEVESISPNDLLLLSKEEFKEGSTFPTTYAFALVEHCQANLLRLRMYLAGE 166
LP +IS +DL+ ++ GS F + A + R +L G+
Sbjct: 999 ALPMNMI----TNNISVDDLVCVANHF---GSAFFNDSSQLTDGSMNARPWKGRAFL-GK 1050
Query: 167 VIHINKD------AVKS----QRLLNIHSLITSSVSAVEKRLFSLKICSLSTIAREYLAL 216
+ IN+ +V+S R+ ++SL +V ++ L+I SL+T REY AL
Sbjct: 1051 INSINQTKNMGEVSVRSYFDPDRISILNSLSPKTVWSM------LRIMSLTTAMREYAAL 1104
Query: 217 RSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIKE-NHNASQLEAIHEGLLRK-AF 274
+ ILS + + S ++ +Y N N Q EAI + +K F
Sbjct: 1105 EGLEHYDLGPEILSPTPTTMKKPSTS-----VIQQYCTNYNVNEPQAEAIASAIQKKKGF 1159
Query: 275 VLIQGPPGTGKTQT----ILGLL------SAILHATPARVHSKGGLREI-KRGPELPMHE 323
LIQGPPGTGKT+T I+ LL S +L P S + EI KR E M
Sbjct: 1160 SLIQGPPGTGKTKTILALIVSLLDQRQGYSKLLVCAP----SNAAVDEITKRLKEGVMTA 1215
Query: 324 KYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNSSRRYRVRVLVCAPSN 383
+ G P +V D++ D E++ ++ N + ++
Sbjct: 1216 Q----GIKKPNVVRIGVADSVNASVKDRILDRLIEAEMEAKIGNDATMSKM--------G 1263
Query: 384 SALDEI--VLRLLNTGIRD--ENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQKRDDSAA 439
+ LD + +R L G+ D I +V++ + A + ++
Sbjct: 1264 ARLDTLHSEIRNLQIGLDDVDREITQAGSDMVQMSILRSKRKALGAKLTKAKMALREAYQ 1323
Query: 440 DKQKHGATRK-DRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEP 498
D++ +G + R R + A +VC+TLS SG +L+ + F+ VI+DEAAQ++E
Sbjct: 1324 DQKNYGQEMEVSRVRARQKVFANADVVCATLSGSGHDMLTSMGASFETVIVDEAAQSIEI 1383
Query: 499 ATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRA-GYPVKMLKTQYR 557
++L+PL ++ LVGDP QLP TV+S VA Y SLF RL++ G V +L QYR
Sbjct: 1384 SSLIPLKFDTQRCILVGDPNQLPPTVMSTVAAKYDYQQSLFMRLEKTVGKEVNLLSIQYR 1443
Query: 558 MHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSW 617
MHPE+ +FPS+ FY L+DG ++ ++ WH F P+ F+D+ +G+E G S
Sbjct: 1444 MHPEISTFPSKLFYQSRLQDGPGMDKISSAIWHALPEFPPYCFYDVRDGQEKMGRGK-SI 1502
Query: 618 INIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDI 677
N+ E D + L L++ P +K +S++ +I+PY+ QV Q + RF++ FG +D
Sbjct: 1503 FNVAEADAAVCLVDLLLTKLPTIKFASKIGVITPYKQQVGQLKARFQKRFGNGIVDAIDF 1562
Query: 678 TTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDK 737
TVDG QG+EK++ IFSCVRA + IGFLAD RRMNVG+TRAK S+ V+G A +L +
Sbjct: 1563 NTVDGFQGQEKEIVIFSCVRAGSGRGIGFLADMRRMNVGLTRAKCSLFVLGHARSLSRSE 1622
Query: 738 HWNNLVKSAEKQDCLFRVSKPY 759
+W +LV+ AEK+ + PY
Sbjct: 1623 YWGDLVRDAEKRSLVRECGYPY 1644
>gi|322701388|gb|EFY93138.1| putative SEN1 protein [Metarhizium acridum CQMa 102]
Length = 2082
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 238/773 (30%), Positives = 362/773 (46%), Gaps = 84/773 (10%)
Query: 16 RFCKIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEE 75
R IL WD F Q + N EV Y D Y ATF PLL E
Sbjct: 1097 RLHNTILAWDIFH-----QGNDPPNGPAAS-------EVATKYLDPRSYQATFFPLLSSE 1144
Query: 76 VKAQIIQKKDEEEVQEWKLRLVMECGEAD----GFHLPSVTYEADEVESISPNDLLLLSK 131
+ KDE Q + ++L F LP + + +S D+LL+S+
Sbjct: 1145 AWRSFVTAKDEITAQPFGMKLASRASVDSFLEVAFTLPVIQ---NRERGVSEGDILLVSE 1201
Query: 132 EEFKEGSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSV 191
E + HC A + R+ ++I I + R + +L+ V
Sbjct: 1202 AE--------SPLQNPNSRHCLARVHRI--TYKKDIIEITYRV--ASRNNQLSTLLMPGV 1249
Query: 192 SAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHE 251
+ ++ +KI +++TI REY AL S+ D IL A E S + KI +
Sbjct: 1250 T-----VYGVKITNMTTIEREYAALESLQYYDLMDEILKA-EPSPILRYGEEKISNAMQN 1303
Query: 252 YIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLR 311
+ N Q A+ F LIQGPPGTGKT+TI ++ ++L A+V + +
Sbjct: 1304 W---TLNHGQAVAVLGAQDNDGFTLIQGPPGTGKTKTITAMVGSLLSEQLAQVSNGVPVG 1360
Query: 312 EIKR--GPELPMHEKYNHWGRASPWLVGA--NPRDNIMPIDGDDGFFPTTGNELKPEVVN 367
R +P + GR LV A N + + + G ++G K + +N
Sbjct: 1361 APLRPSAGAIPAAQ-----GRPKKLLVCAPSNAAVDELVLRLKSGIKTSSG---KTKPIN 1412
Query: 368 SSRRYRVRVLVCAPSNSALDEIV-LRLLNTGIRDE-------------NIRSYTPKIVRI 413
R R + A + LDE+V +R+ +D+ I+ +I ++
Sbjct: 1413 VLRLGRSDAINAAVKDVTLDELVRIRMEGDNTKDKAKAERDKLHGDAAKIKEELAEIRQL 1472
Query: 414 GLKAHHSVNSVA-------IDHLVEQ-----KRDDSAADKQKHGATRKD--RDSIRSAIL 459
+A N + D L Q K+ D+ D A + R ++ IL
Sbjct: 1473 LDEARAQDNRITQNTLSRKFDELKRQQMNIGKQIDANKDSGNSLAREMEMRRRQVQQEIL 1532
Query: 460 NEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQ 519
N A ++C+TLS SG + L+ F+ VIIDEAAQ VE + L+PL GC + LVGDP Q
Sbjct: 1533 NSAHVLCATLSGSGHEMFRNLDVEFETVIIDEAAQCVELSALIPLKYGCCKCILVGDPKQ 1592
Query: 520 LPATVISPVAEHLGYGTSLFKRLQRAGYP--VKMLKTQYRMHPEVRSFPSREFYDEALED 577
LP TV+S A GY SLF R+Q+ +P V +L QYRMHPE+ FPS+EFY+ L+D
Sbjct: 1593 LPPTVLSQSAARFGYDQSLFVRMQQ-NHPRSVHLLDMQYRMHPEISMFPSKEFYEGQLQD 1651
Query: 578 GSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMY 637
G D+ + WH+ GP+ FFD+ EG + + S +N E+ + ++ + Y
Sbjct: 1652 GQDMLQLRQQPWHQSALLGPYRFFDV-EGVQEKGRKGQSLVNTRELQVAMEIYDRFSKEY 1710
Query: 638 PQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVR 697
Q + ++ II+PY+ Q+ + + RF +G +++ T D QGRE ++ IFSCVR
Sbjct: 1711 KQCDLTGKIGIITPYKAQLFELRNRFTSRYGENITDIIEFNTTDAFQGRECEIIIFSCVR 1770
Query: 698 ASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQD 750
AS IGF+ D RRMNVG+TRAKSS+ ++G + L + + W L++ A+ +D
Sbjct: 1771 ASSTGGIGFMTDIRRMNVGLTRAKSSLWILGDSRALVQGEFWKKLIEDAKARD 1823
>gi|345562914|gb|EGX45922.1| hypothetical protein AOL_s00112g111 [Arthrobotrys oligospora ATCC
24927]
Length = 1999
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 234/779 (30%), Positives = 379/779 (48%), Gaps = 118/779 (15%)
Query: 21 ILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKAQI 80
IL W++F NS K D V +++ +Y TFEPLL E QI
Sbjct: 1082 ILSWNFFHAGDLP-----PNSTKTDYSM-----VTQSFRSAKEYEETFEPLLLLECWQQI 1131
Query: 81 IQKKDE-EEVQEWKLRLVMECGEADGFHLPSVTYEADEVESI-SPNDLLLLSKEEFKEGS 138
+ ++E + +++V G AD F + +A+ +I + +D++L+S+ + +
Sbjct: 1132 VTAREEAPNASAFDIKVVAR-GSADSF----IEIQANVPTNILATSDIVLVSQSQ-SPAT 1185
Query: 139 TFPTTYAFALVEHCQANL-----LRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSA 193
P ALV+ + LR E I A++ Q
Sbjct: 1186 GDPKMSCLALVQSASNRRGTHAEISLRCLPNSEFI----PAIRPQ--------------- 1226
Query: 194 VEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYI 253
L +K+ SL+ I REY AL+++ + I+ + + +
Sbjct: 1227 --GNLRGIKVLSLTPIEREYAALKALRYYHLCEQIIKGRPHVHIEPEDRH-----VSRTM 1279
Query: 254 KENH-NASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLRE 312
K H N Q AI + F LIQGPPGTGKT+T++ ++ A+L S G
Sbjct: 1280 KVYHVNKPQARAIIGAVRNDGFSLIQGPPGTGKTKTVIAVIGALLPDDKGVTISIPG--- 1336
Query: 313 IKRGPELPMHEKYNHWGRASPWLVGANPRD---NIMPIDGDDGFFPTTGNELKPEVVNSS 369
K G S L+ P + + + I +G +G++ P VV
Sbjct: 1337 ----------SKQPSSGVVSKKLLVCAPSNAAVDELVIRLKEGVVKQSGDKFTPAVV--- 1383
Query: 370 RRYRVRVLVCAPSNSALDEIVLRLLNTGIRDEN------------IRSYTPKIVRI---- 413
R R+ V+ A + AL+ +V + +N E+ I P++ +
Sbjct: 1384 RLGRLDVINQAVHDVALETLVEKKINFQKEKEDSSGGKSKEKPNTIDELRPRMDVLLAER 1443
Query: 414 -----------------GLKAHHSVNSVA-----IDHLVEQKRDDSAADKQKHGATRKDR 451
LK + ++ + +++ RD SA + + R++
Sbjct: 1444 KAKWAESDQARSEQREPPLKLREEIEALTRKIKDLGRQLDEIRDQSAMVNRNNDIRRRE- 1502
Query: 452 DSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQV 511
+L+EA I+C+TLS +G L LN F+ VIIDEAAQ++E + L+P+ GCK+
Sbjct: 1503 --FMQQVLDEAHILCATLSGAGHDTLRNLNVEFETVIIDEAAQSIELSALIPMKFGCKKC 1560
Query: 512 FLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYP--VKMLKTQYRMHPEVRSFPSRE 569
+VGDP QLP TV+S A Y SLF R+Q+ +P V +L QYRMHP + SFPS
Sbjct: 1561 IMVGDPKQLPPTVLSREASKFAYEQSLFVRMQK-NHPESVHLLSIQYRMHPAISSFPSEM 1619
Query: 570 FYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSG-SWINIDEVDFVLL 628
FY+ LEDG D+ ++ WH+ FGP+ FF++ Q A SG S NI EV+ L+
Sbjct: 1620 FYNSQLEDGPDMTMLRSQPWHQSLFFGPYRFFNV----VGQEAMSGHSMKNIHEVNVALM 1675
Query: 629 LFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREK 688
++ +L++ +P+ S ++ II+PY+ Q+ +++F +T+ + + ++ T D QGRE+
Sbjct: 1676 IYKRLVADFPETNFSGKIGIITPYKTQLHALRQKFVDTYNDQILRTIEFNTTDAFQGRER 1735
Query: 689 DVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAE 747
++ IFSCVRAS K +IGFL+D RRMNVG+TRA+SS+ V+G A+TL++++ W +LV++A+
Sbjct: 1736 EIIIFSCVRASQKSTIGFLSDIRRMNVGLTRARSSLFVLGNANTLKKNEFWASLVENAQ 1794
>gi|340519570|gb|EGR49808.1| hypothetical protein TRIREDRAFT_59544 [Trichoderma reesei QM6a]
Length = 2034
Score = 304 bits (778), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 242/785 (30%), Positives = 358/785 (45%), Gaps = 106/785 (13%)
Query: 16 RFCKIILGWDYFRLVKESQERNDK-NSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFE 74
R IL WD F ND N K EV Y D Y TF PLL
Sbjct: 1122 RLHNTILAWDIF------HAGNDPPNGPKAS-------EVATKYADPKSYQETFFPLLAS 1168
Query: 75 EVKAQIIQKKDEEEVQEWKLRLVMECGEAD----GFHLPSVTYEADEVESISPNDLLLLS 130
E + KDE Q + +++ F +P + I D++L+S
Sbjct: 1169 EAWRSFVTSKDENTAQSFGMKIASRASVDSYLEVTFTMPVAPHRD---RGIYEGDIILVS 1225
Query: 131 KEE--FKEGSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVK-SQRLLNIHSLI 187
+ E +GS +HC A + R I KD V+ + R+ + ++ +
Sbjct: 1226 EAENPLVDGS----------AKHCLARVHR---------ITYKKDTVEVTYRVASRNNPL 1266
Query: 188 TSSVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSA--------SEKSSGSQ 239
+ +++ ++ +KI +++TI REY AL S+ D IL A E+ S
Sbjct: 1267 SPNLTP-GVTIYGVKITNMATIEREYAALESLQYYDLMDEILKAEPSPILRYGEERVTSY 1325
Query: 240 DQSWKIPGLLHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHA 299
++W + N Q A+ F LIQGPPGTGKT+TI+ ++ A+L
Sbjct: 1326 MENWAL------------NRGQALAVLGAQENDGFTLIQGPPGTGKTKTIVAMVGALLSE 1373
Query: 300 TPARVHSKGGLREIKRGPELPMHEKYNHWGRASPWLVGA--NPRDNIMPIDGDDGFFPTT 357
A+ +S G P P + R+ LV A N + + + G
Sbjct: 1374 QLAQ-NSLAGAGVPLGTPIKPAGAPTGNQARSKKLLVCAPSNAAVDELVLRLKGGIKTAN 1432
Query: 358 GNELKPEVVNSSRRYRVRVLVCAPSNSALDEIV-LRLLNTGIRD---------------- 400
G K +N R R + A + LDE+V RL +D
Sbjct: 1433 G---KDRNINVLRLGRSEAINAAVKDVTLDEMVKARLEGDTTKDKAKADRDKLHEEAAQV 1489
Query: 401 -ENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQKRDDSAADKQKHGATRKD--------- 450
E + P++ S+++ E KR KQ KD
Sbjct: 1490 KEQLAQLRPRLEESRNHDDRSLHNSLSRQFDELKRKQMQIGKQIDA--NKDSGNSIAREM 1547
Query: 451 ---RDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATG 507
R I+ ILN A ++C+TLS SG + L+ F+ VIIDEAAQ VE + L+PL G
Sbjct: 1548 ELRRRQIQQEILNSAHVLCATLSGSGHEMFRNLDVEFETVIIDEAAQCVELSALIPLKYG 1607
Query: 508 CKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYP--VKMLKTQYRMHPEVRSF 565
C + LVGDP QLP TV+S A GY SLF R+Q+ +P V +L QYRMHPE+ SF
Sbjct: 1608 CCKCILVGDPKQLPPTVLSQSAARFGYDQSLFVRMQQ-NHPKSVHLLDMQYRMHPEISSF 1666
Query: 566 PSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDF 625
PSREFY+ L+DG D+ WH+ F P+ FFD+ EG + + S +N E+D
Sbjct: 1667 PSREFYESQLKDGQDMLRLRQAPWHKDALFAPYRFFDV-EGVQERGRKGQSLVNTKELDV 1725
Query: 626 VLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQG 685
L ++ + Y + ++ II+PY+ Q+ + + RF+ +G +++ T D QG
Sbjct: 1726 ALQMYERFSRDYRDCDLTRKIGIITPYKAQLHELRSRFQARYGENITNIIEFNTTDAFQG 1785
Query: 686 REKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKS 745
RE ++ IFSCVRAS IGF+ D RRMNVG+TRAKSS+ ++G + L + + W L++
Sbjct: 1786 RECEIIIFSCVRASSTGGIGFMTDIRRMNVGLTRAKSSLWILGDSRALVQGEFWRKLIED 1845
Query: 746 AEKQD 750
A+ +D
Sbjct: 1846 AQGRD 1850
>gi|340975658|gb|EGS22773.1| 5'-3' RNA helicase-like protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1993
Score = 304 bits (778), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 242/808 (29%), Positives = 367/808 (45%), Gaps = 167/808 (20%)
Query: 21 ILGWDYFRLVKESQERNDKNSKKVDRGKLGLR--EVKDTYKDVDDYLATFEPLLFEEVKA 78
IL WD F E ND + G R V DTY D Y TF PLL E
Sbjct: 1114 ILEWDIF------HEGNDPPN--------GYRCGNVSDTYPDPYSYKQTFFPLLINEAWR 1159
Query: 79 QIIQKKDEEEVQEWKLRLVMECGEADGFH--LPSVTYEADEVESISPNDLLLLSKEEFKE 136
+ KDE + + ++ V+ D F +V + + ++ D++++SK E
Sbjct: 1160 SFVTAKDETTSKPFGIK-VLSRMTVDKFMEVTAAVPAQISKDRGLTEGDIVIISKGED-- 1216
Query: 137 GSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNI--HSLITSSVSAV 194
P L HC + + + KD V+ LN + ++ +
Sbjct: 1217 ----PLNQPQEL--HCLSRIWK---------TTYKKDTVEVVYRLNAKGNQILPALTPGS 1261
Query: 195 EKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGS-QDQSWKIPGLLHEYI 253
E ++ +KI +++TI REY AL S+ D IL A + D++ I ++ Y
Sbjct: 1262 EFQV--VKITNMTTIEREYAALESLQYYDLMDEILKAQPSPMLTFGDEA--IKAVMDNY- 1316
Query: 254 KENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLREI 313
N Q AI F LIQGPPGTGKT+TI+ ++ +L T S G +I
Sbjct: 1317 --QLNPGQARAILNAKENDGFTLIQGPPGTGKTKTIVAMVGCLL--TGVLKSSNTGAVQI 1372
Query: 314 KRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNSSRRYR 373
R GA P + P
Sbjct: 1373 SRP--------------------GAGPTNGTAPSK------------------------- 1387
Query: 374 VRVLVCAPSNSALDEI-------------------VLRLLNTGIRDENIRSYT-PKIVRI 413
++LVCAPSN+A+DE+ VLRL + + + ++ T ++V+
Sbjct: 1388 -KLLVCAPSNAAVDELVLRLKAGVKTMNGTFHKIEVLRLGRSDVINAAVKDVTLDELVKA 1446
Query: 414 GLKAHHSVNSVAIDH-------------LVE--------------------QKRDDSAAD 440
+ A S NS + L E Q+ D
Sbjct: 1447 RMDAELSKNSSPSERDQLHKEAGEIKAKLAEIRPQLDAARLSDDRASAMKLQREFDELKR 1506
Query: 441 KQKHGATRKDRD----------------SIRSAILNEAVIVCSTLSFSGSALLSKLNHGF 484
+Q H + D D I+ IL++A ++C+TLS SG + LN F
Sbjct: 1507 RQAHIGAKIDADKASGNTYARETEIKRRQIQQEILDKAQVLCATLSGSGHEMFKNLNVEF 1566
Query: 485 DVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQR 544
+ VIIDEAAQ VE + L+PL GC + LVGDP QLP TV+S A GY SLF R+Q+
Sbjct: 1567 ETVIIDEAAQCVELSALIPLKYGCNKCILVGDPKQLPPTVLSQSAAKYGYDQSLFVRMQK 1626
Query: 545 AGYP--VKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFD 602
+P V +L QYRMHPE+ FPS+EFY+ L+DG+D+ + WH+ GP+ FFD
Sbjct: 1627 -NHPKDVHLLDMQYRMHPEISRFPSKEFYEGLLQDGADMARLRLQPWHQSVLLGPYRFFD 1685
Query: 603 IHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQER 662
+ +E P S +N +EV + L+ + S Y + + ++ II+PY+ Q+++ +++
Sbjct: 1686 VKGSQERGPKNQ-SLVNEEEVKVAMQLYMRFRSDYRDIDLTGKIGIITPYKAQLQRLRQK 1744
Query: 663 FKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKS 722
F E +G + ++ T D QGRE ++ IFSCVRAS IGF+ D RRMNVG+TRA+S
Sbjct: 1745 FVERYGESITEQIEFNTTDAFQGRECEIIIFSCVRASPTGGIGFMTDIRRMNVGLTRARS 1804
Query: 723 SILVVGCASTLREDKHWNNLVKSAEKQD 750
S+ ++G + L + + W L++ A+++D
Sbjct: 1805 SLWILGDSRALVQGEFWAKLIEDAKQRD 1832
>gi|344301279|gb|EGW31591.1| hypothetical protein SPAPADRAFT_51586 [Spathaspora passalidarum NRRL
Y-27907]
Length = 1937
Score = 303 bits (777), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 240/778 (30%), Positives = 372/778 (47%), Gaps = 104/778 (13%)
Query: 36 RNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKAQIIQKKDEEEVQEWKLR 95
R + NS K +VKDTY +V DY++T EPLL E Q IQ+ V+E
Sbjct: 1054 RYNTNSDYPSEDKSSYTQVKDTYDNVKDYVSTTEPLLMLEC-WQGIQQAKATGVEEPFEM 1112
Query: 96 LVMECGEADGFH--LPSVTYEADEVESISPNDLLLLS---------KEEFKEGSTFPTTY 144
L+ DGF SV + + I +DLL+L +E + T
Sbjct: 1113 LIGTRTSVDGFFDVFASVEKKTIQDRKIGDSDLLVLGIHDGVTKSPREIMNHLKSESATT 1172
Query: 145 AFALVEHCQANL-----LRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSAVEKRLF 199
A V + N + R+Y +G ++ + L+ S+ +
Sbjct: 1173 CLAKVREIKYNNTDYCDITFRVYPSGSMVGV---------------LLPKSI------IV 1211
Query: 200 SLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIKE---- 255
+++ + T+ RE+ +LR L + DL+ + P +H+ E
Sbjct: 1212 GMRVMQMITVEREFSSLRG---LQYYDLLFPILQARPND-------PIPIHDSATEDMCK 1261
Query: 256 --NHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLREI 313
N N SQ +AI + F LIQGPPGTGKT+TILG++ L ++
Sbjct: 1262 KFNLNVSQAKAILGTHQSEGFSLIQGPPGTGKTKTILGIVGYSLSQKDEKIL-------- 1313
Query: 314 KRGPELPMHEKYNHWGRASPWLVGA--NPRDNIMPIDGDDGFFPTTGNELKPEVVNSSRR 371
++P H + L+ A N + + + DG ++G + +VV R
Sbjct: 1314 ----DIPGHTPTTDPAKI---LICAPSNAAVDELVLRLRDGVKNSSGETMNLKVVRLGRS 1366
Query: 372 YRVRVLVCAPSNSALDEIVLRLLNTGIRDEN----IRSYTPKIV--RIGLKAHHSVNSVA 425
+ V + L+E+V + L T D N IR K + R L+A S++
Sbjct: 1367 DAINASV---RDLTLEELVDKELQTKAVDVNIDPTIRQQHSKCIEERDALRARLVNESLS 1423
Query: 426 IDHL---------VEQKRDDSAA--DKQKHGAT------RKDRDSIRSAILNEAVIVCST 468
+ V +KR + A D+Q+ A+ +R + ++ IL++A ++CST
Sbjct: 1424 EKEMTDLEDRLRTVNKKRSELAKRLDEQRERASIAYRTKEIERRNAQARILSQAQVICST 1483
Query: 469 LSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPV 528
LS S L+ L+ FD VI+DEA Q VE + ++PL GC+ +VGDP QLP TV+S
Sbjct: 1484 LSGSAHDFLASLSLKFDKVIVDEACQCVELSAIIPLRYGCRTCIMVGDPNQLPPTVLSQA 1543
Query: 529 AEHLGYGTSLFKRLQRAGYP--VKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTT 586
A Y SLF R+Q+ +P V +L QYRMHP++ FPS EFY+ L+DG + +
Sbjct: 1544 AASYNYEQSLFVRMQK-NHPDSVYLLDVQYRMHPQISQFPSAEFYNSKLKDGEGMLEKND 1602
Query: 587 RDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQL 646
R WH+ P+ FFDI K + S S N++E L L KL+++ PQ K ++
Sbjct: 1603 RPWHKDPPLTPYRFFDI-VSKHERDDQSRSLFNVEEARVALELVQKLMTILPQDKFRGRI 1661
Query: 647 AIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGF 706
IISPY+ Q++ + F +G Q +D TVDG QG+EK++ I SCVRAS ++GF
Sbjct: 1662 GIISPYKEQIRSIKNEFIRRYGRAIQDDIDFNTVDGFQGQEKEIIIMSCVRASPSGNVGF 1721
Query: 707 LADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRVSKPYASFFS 764
L+D RRMNV +TRA++++ ++G +L + W L++ A +DC +SK Y F +
Sbjct: 1722 LSDVRRMNVALTRARTTLWILGNKDSLSRNNVWRRLLEDASNRDC---ISKAYPGFLN 1776
>gi|378730540|gb|EHY56999.1| senataxin [Exophiala dermatitidis NIH/UT8656]
Length = 2264
Score = 303 bits (777), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 237/805 (29%), Positives = 369/805 (45%), Gaps = 158/805 (19%)
Query: 19 KIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKA 78
+ IL WD+F + NS K D V +T+++ DY TFEPLL E
Sbjct: 1091 RTILSWDFF-----ADTDLPPNSAKDD-----YTLVTNTFRNALDYQKTFEPLLILEGWQ 1140
Query: 79 QIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADEVE-SISPNDLLLLSKEEFKEG 137
Q ++E + +++++ + + S A+ + SI +D++LLSK
Sbjct: 1141 SFRQAREEGNFKPFEVKVANSLIVDNFVEVNSAMSFAEGKDLSIGTSDVVLLSKSS---- 1196
Query: 138 STFPTTYAFALVEHCQANLLRLRMYLAGEV---IHINKDAVKSQRLLNIHSLITSSVSAV 194
T HC A + + GEV +N + LN + I
Sbjct: 1197 ----TPDQDPQQPHCLARVKEISRK-KGEVQIVYRVNASNNPLRSYLNDKTTI------- 1244
Query: 195 EKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIK 254
+ ++I SL+ + REY AL ++ + I+ A K S D + L + +
Sbjct: 1245 ----YGVQISSLTPLEREYGALMALQYYDLCEEIIRA--KPSPILDYPDSVLAPLQKTYE 1298
Query: 255 ENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLREIK 314
N +Q +A+ L AF LIQGPPG+GKT+TI L+ A++ KG
Sbjct: 1299 VNK--AQAKAVKSALDNDAFTLIQGPPGSGKTKTICALVGAMMTGFIKNSDGKG------ 1350
Query: 315 RGPELPMHEKYNH-WGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNSSRRYR 373
+ N GR SP + R
Sbjct: 1351 --------VRLNAATGRPSP-----------------------------------APRAS 1367
Query: 374 VRVLVCAPSNSALDEIVLRL------------------------LNTGIRDENIRSYTPK 409
++LVCAPSN+A+DE+V+RL +N G++D +
Sbjct: 1368 KKILVCAPSNAAVDELVMRLKLGVTTLDGQFEKLSVVRLGRTDAINAGVKDVTLEELVNA 1427
Query: 410 IVRIGLK--AHHSVNSVAIDH-------------LVEQK--------RDDSAAD---KQK 443
+ + ++SV ++H + EQ+ D+ D ++K
Sbjct: 1428 KLNVAAPKDPREDIHSVMMEHKAVSEELNALRDRITEQRGKGIPVPTADEQLMDALKRKK 1487
Query: 444 HGATRK-----------------DRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDV 486
+G K R I+ IL+ A ++C+TLS SG + LN F+
Sbjct: 1488 NGLGSKIDEMRERQNTASRDMELSRKRIQQEILDSAHVLCATLSGSGHEIFQSLNVEFET 1547
Query: 487 VIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRA- 545
VIIDEAAQ++E + L+PL GC + LVGDP QLP TV+S A Y SLF R++
Sbjct: 1548 VIIDEAAQSIELSALIPLKYGCSKCILVGDPKQLPPTVLSREAAKFQYEQSLFARMENNH 1607
Query: 546 GYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHE 605
V +L TQYRMHP + FPS+ FYD L+DG+D+ R WH+ F P+ FFD+
Sbjct: 1608 KKDVHLLDTQYRMHPAISLFPSKTFYDSRLKDGADMAKLRRRPWHQSDLFAPYRFFDVQG 1667
Query: 606 GKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKE 665
++ P G S +NI E++ + L+ +L+ P+ + ++ +I+PY+ Q+K+ + RF +
Sbjct: 1668 MSQAAPKGH-SLVNIAELNVAMQLYDRLVKDVPKYDFAGKIGVITPYKGQLKELKLRFTQ 1726
Query: 666 TFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSIL 725
+G + ++ T D QGRE ++ IFSCVRAS IGFL D RRMNVG+TRAKSS+
Sbjct: 1727 RYGQDITSKIEFNTTDAFQGRESEIIIFSCVRAS-THGIGFLNDIRRMNVGLTRAKSSLW 1785
Query: 726 VVGCASTLREDKHWNNLVKSAEKQD 750
V+G + +L + ++W LV A+ ++
Sbjct: 1786 VLGNSQSLMQGEYWRALVNDAKARN 1810
>gi|365764213|gb|EHN05738.1| Sen1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 2101
Score = 303 bits (776), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 232/784 (29%), Positives = 376/784 (47%), Gaps = 98/784 (12%)
Query: 19 KIILGWDYFRLVKESQERNDKNSKKVDRGKLG-LREVKDTYKDVDDYLATFEPLLFEEVK 77
+IIL WDY R NS+ D +G +VKD + DY +PLL E
Sbjct: 988 EIILQWDYTR-----------NSEYPDDEPIGNYSDVKDFFNSPADYQKVMKPLLLLESW 1036
Query: 78 AQIIQKKDEEEVQEWKLRLVMECGEADGFHL-PSVTYEADEVESISPNDLLLLSK-EEFK 135
+ +D E+ + + + + +D + + SV + + IS +DL++++ +F+
Sbjct: 1037 QGLCSSRDREDYKPFSIIVGNRTAVSDFYDVYASVAKQVIQDCGISESDLIVMAYLPDFR 1096
Query: 136 EGSTFPTTYAFALVEH-CQANLLRLRMYLAGEV-----IHINKDAVKSQRLLNIHSLITS 189
++ F +H C A + L+ G V IH N HS S
Sbjct: 1097 PDKRL-SSDDFKKAQHTCLAKVRTLKNTKGGNVDVTLRIHRN------------HSF--S 1141
Query: 190 SVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLL 249
+ ++ +K+ ++TI REY L + IL A + D +
Sbjct: 1142 KFLTLRSEIYCVKVMQMTTIEREYSTLEGLEYYDLVGQILQAKPSPPVNVDAAEI----- 1196
Query: 250 HEYIKENH--NASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSK 307
E +K+++ N SQ EAI + ++ F LIQGPPGTGKT+TILG++ L A +
Sbjct: 1197 -ETVKKSYKLNTSQAEAIVNSVSKEGFSLIQGPPGTGKTKTILGIIGYFLSTKNASSSNV 1255
Query: 308 GGLREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVN 367
+ K K +P +N + + + G + G++ KP++V
Sbjct: 1256 IKVPLEKNSSNTEQLLKKQKILICAP----SNAAVDEICLRLKSGVYDKQGHQFKPQLV- 1310
Query: 368 SSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRS---------------------- 405
R R V+ A + L+E+V + + G R+ IR+
Sbjct: 1311 --RVGRSDVVNVAIKDLTLEELVDKRI--GERNYEIRTDPELERKFNNAVTKRRELRGKL 1366
Query: 406 -----------YTPKIVRIGLKAHHSVNSVAIDHLVEQKRDDSAADKQKHGATRKDRD-- 452
T I ++ LK + ++ + D ++K+ ++RD
Sbjct: 1367 DSESGNPESPMSTEDISKLQLKIRE------LSKIINELGRDRDEMREKNSVNYRNRDLD 1420
Query: 453 --SIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQ 510
+ ++ IL + I+CSTLS S +L+ + FD VIIDEA Q E ++++PL G K+
Sbjct: 1421 RRNAQAHILAVSDIICSTLSGSAHDVLATMGIKFDTVIIDEACQCTELSSIIPLRYGGKR 1480
Query: 511 VFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREF 570
+VGDP QLP TV+S A + Y SLF R+++ P +L QYRMHP + FPS EF
Sbjct: 1481 CIMVGDPNQLPPTVLSGAASNFKYNQSLFVRMEKNSSPY-LLDVQYRMHPSISKFPSSEF 1539
Query: 571 YDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
Y L+DG ++ R WH+ P+ FFDI G++ Q A + S+ N++E+ + L
Sbjct: 1540 YQGRLKDGPGMDILNKRPWHQLEPLAPYKFFDIISGRQEQNAKTMSYTNMEEIRVAIELV 1599
Query: 631 HKLISMY-PQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKD 689
L + ++ + ++ IISPYR Q+++ ++ F FG K +D T+DG QG+EK+
Sbjct: 1600 DYLFRKFDNKIDFTGKIGIISPYREQMQKMRKEFARYFGGMINKSIDFNTIDGFQGQEKE 1659
Query: 690 VAIFSCVRASD-KKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEK 748
+ + SCVRA D K S+GFL D+RRMNV +TRAK+SI V+G +L + K W +L++ A+
Sbjct: 1660 IILISCVRADDTKSSVGFLKDFRRMNVALTRAKTSIWVLGHQRSLAKSKLWRDLIEDAKD 1719
Query: 749 QDCL 752
+ CL
Sbjct: 1720 RSCL 1723
>gi|358393396|gb|EHK42797.1| hypothetical protein TRIATDRAFT_86336 [Trichoderma atroviride IMI
206040]
Length = 2056
Score = 303 bits (775), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 236/774 (30%), Positives = 365/774 (47%), Gaps = 84/774 (10%)
Query: 16 RFCKIILGWDYFRLVKESQERNDK-NSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFE 74
R +L WD F ND N K EV Y + Y TF PLL
Sbjct: 1123 RLHNTVLAWDIF------HAGNDPPNGPKAS-------EVATKYSNPQSYQETFFPLLAS 1169
Query: 75 EVKAQIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADEVES----ISPNDLLLLS 130
E + KDE Q + +++ D + VT+ ++S + D+LL+S
Sbjct: 1170 EAWRSFVTSKDEVTAQPFGMKIASRAS-VDSYL--EVTFTMPILQSRERGVFEGDILLVS 1226
Query: 131 KEEFKEGSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVK-SQRLLNIHSLITS 189
+ E F +HC A + R+ KD V+ + R+ + + ++
Sbjct: 1227 EAE--------NPLVFESAKHCLARVHRM---------TYKKDTVEVTYRVASRSNPLSP 1269
Query: 190 SVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLL 249
S++ + +KI +++TI REY AL S+ D IL A E S + ++ +
Sbjct: 1270 SLTP-GATVHGVKITNMATIEREYAALESLQYYDLMDEILKA-EPSPILRYGEERVSNYM 1327
Query: 250 HEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGG 309
+ N Q A+ F LIQGPPGTGKT+TI+ ++ A+L A++ +
Sbjct: 1328 GNWA---LNQGQALAVLGAQENDGFTLIQGPPGTGKTKTIVAMVGALLSEQLAQIPAAAT 1384
Query: 310 LREIKRG-PELPMHEKYNHWGRASPWLVGA--NPRDNIMPIDGDDGFFPTTGNELKPEVV 366
+ G P P + R LV A N + + + G T+G K +
Sbjct: 1385 --GVPLGVPMRPNGAPGGNQARPKKLLVCAPSNAAVDELVLRLKSGIKTTSG---KARNI 1439
Query: 367 NSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKI-------------VRI 413
N R R + A + LDE+V + L + ++ K+ +R
Sbjct: 1440 NVLRLGRSEAINAAVKDVTLDELVKKRLEGDTTKDKAKADRDKLHEEAAEVKEQLAQLRP 1499
Query: 414 GLKAHHSVNSVAIDHLVEQKRDDSAADKQKHGA---TRKD------------RDSIRSAI 458
L+ + + A+ + + ++ DD + + G KD R I+ I
Sbjct: 1500 RLEESRNNDDRALHNSLSRQFDDLKRKQMQIGKQIDANKDSGNSIAREMELRRRQIQQEI 1559
Query: 459 LNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPV 518
LN A ++C+TLS SG + L+ F+ VIIDEAAQ VE + L+PL GC + LVGDP
Sbjct: 1560 LNSAHVLCATLSGSGHEMFRNLDVEFETVIIDEAAQCVELSALIPLKYGCCKCILVGDPK 1619
Query: 519 QLPATVISPVAEHLGYGTSLFKRLQRAGYP--VKMLKTQYRMHPEVRSFPSREFYDEALE 576
QLP TV+S A GY SLF R+Q+ +P V +L QYRMHPE+ FPSREFY+ L
Sbjct: 1620 QLPPTVLSQSAARFGYDQSLFVRMQQ-NHPKSVHLLDMQYRMHPEISHFPSREFYESQLH 1678
Query: 577 DGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISM 636
DG D+ WH+ F P+ FFD+ EG + + S +N E++ L L+ +
Sbjct: 1679 DGQDMLQLRQAPWHKDTLFAPYRFFDV-EGVQERGRKGQSLVNTRELEVALQLYERFSRE 1737
Query: 637 YPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCV 696
Y + + ++ II+PY+ Q+ + + RF+ +G +++ T D QGRE ++ IFSCV
Sbjct: 1738 YRDIDLTRKIGIITPYKAQLYELRSRFQARYGENITDIIEFNTTDAFQGRECEIIIFSCV 1797
Query: 697 RASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQD 750
RAS IGF+ D RRMNVG+TRAKSS+ ++G + L + + W L+ A+++D
Sbjct: 1798 RASSTGGIGFMTDIRRMNVGLTRAKSSLWILGDSRALVQGEFWRKLIVDAQERD 1851
>gi|398366241|ref|NP_013534.3| putative DNA/RNA helicase SEN1 [Saccharomyces cerevisiae S288c]
gi|3123282|sp|Q00416.2|SEN1_YEAST RecName: Full=Helicase SEN1; AltName: Full=tRNA-splicing endonuclease
positive effector
gi|664872|gb|AAB67502.1| Sen1p [Saccharomyces cerevisiae]
gi|285813835|tpg|DAA09731.1| TPA: putative DNA/RNA helicase SEN1 [Saccharomyces cerevisiae S288c]
gi|392297931|gb|EIW09030.1| Sen1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 2231
Score = 303 bits (775), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 232/784 (29%), Positives = 376/784 (47%), Gaps = 98/784 (12%)
Query: 19 KIILGWDYFRLVKESQERNDKNSKKVDRGKLG-LREVKDTYKDVDDYLATFEPLLFEEVK 77
+IIL WDY R NS+ D +G +VKD + DY +PLL E
Sbjct: 1118 EIILQWDYTR-----------NSEYPDDEPIGNYSDVKDFFNSPADYQKVMKPLLLLESW 1166
Query: 78 AQIIQKKDEEEVQEWKLRLVMECGEADGFHL-PSVTYEADEVESISPNDLLLLSK-EEFK 135
+ +D E+ + + + + +D + + SV + + IS +DL++++ +F+
Sbjct: 1167 QGLCSSRDREDYKPFSIIVGNRTAVSDFYDVYASVAKQVIQDCGISESDLIVMAYLPDFR 1226
Query: 136 EGSTFPTTYAFALVEH-CQANLLRLRMYLAGEV-----IHINKDAVKSQRLLNIHSLITS 189
++ F +H C A + L+ G V IH N HS S
Sbjct: 1227 PDKRL-SSDDFKKAQHTCLAKVRTLKNTKGGNVDVTLRIHRN------------HSF--S 1271
Query: 190 SVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLL 249
+ ++ +K+ ++TI REY L + IL A + D +
Sbjct: 1272 KFLTLRSEIYCVKVMQMTTIEREYSTLEGLEYYDLVGQILQAKPSPPVNVDAAEI----- 1326
Query: 250 HEYIKENH--NASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSK 307
E +K+++ N SQ EAI + ++ F LIQGPPGTGKT+TILG++ L A +
Sbjct: 1327 -ETVKKSYKLNTSQAEAIVNSVSKEGFSLIQGPPGTGKTKTILGIIGYFLSTKNASSSNV 1385
Query: 308 GGLREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVN 367
+ K K +P +N + + + G + G++ KP++V
Sbjct: 1386 IKVPLEKNSSNTEQLLKKQKILICAP----SNAAVDEICLRLKSGVYDKQGHQFKPQLV- 1440
Query: 368 SSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRS---------------------- 405
R R V+ A + L+E+V + + G R+ IR+
Sbjct: 1441 --RVGRSDVVNVAIKDLTLEELVDKRI--GERNYEIRTDPELERKFNNAVTKRRELRGKL 1496
Query: 406 -----------YTPKIVRIGLKAHHSVNSVAIDHLVEQKRDDSAADKQKHGATRKDRD-- 452
T I ++ LK + ++ + D ++K+ ++RD
Sbjct: 1497 DSESGNPESPMSTEDISKLQLKIRE------LSKIINELGRDRDEMREKNSVNYRNRDLD 1550
Query: 453 --SIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQ 510
+ ++ IL + I+CSTLS S +L+ + FD VIIDEA Q E ++++PL G K+
Sbjct: 1551 RRNAQAHILAVSDIICSTLSGSAHDVLATMGIKFDTVIIDEACQCTELSSIIPLRYGGKR 1610
Query: 511 VFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREF 570
+VGDP QLP TV+S A + Y SLF R+++ P +L QYRMHP + FPS EF
Sbjct: 1611 CIMVGDPNQLPPTVLSGAASNFKYNQSLFVRMEKNSSPY-LLDVQYRMHPSISKFPSSEF 1669
Query: 571 YDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
Y L+DG ++ R WH+ P+ FFDI G++ Q A + S+ N++E+ + L
Sbjct: 1670 YQGRLKDGPGMDILNKRPWHQLEPLAPYKFFDIISGRQEQNAKTMSYTNMEEIRVAIELV 1729
Query: 631 HKLISMY-PQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKD 689
L + ++ + ++ IISPYR Q+++ ++ F FG K +D T+DG QG+EK+
Sbjct: 1730 DYLFRKFDNKIDFTGKIGIISPYREQMQKMRKEFARYFGGMINKSIDFNTIDGFQGQEKE 1789
Query: 690 VAIFSCVRASD-KKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEK 748
+ + SCVRA D K S+GFL D+RRMNV +TRAK+SI V+G +L + K W +L++ A+
Sbjct: 1790 IILISCVRADDTKSSVGFLKDFRRMNVALTRAKTSIWVLGHQRSLAKSKLWRDLIEDAKD 1849
Query: 749 QDCL 752
+ CL
Sbjct: 1850 RSCL 1853
>gi|172574|gb|AAB63976.1| SEN1 [Saccharomyces cerevisiae]
Length = 2112
Score = 303 bits (775), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 232/786 (29%), Positives = 377/786 (47%), Gaps = 102/786 (12%)
Query: 19 KIILGWDYFRLVKESQERNDKNSKKVDRGKLG-LREVKDTYKDVDDYLATFEPLLFEEVK 77
+IIL WDY R NS+ D +G +VKD + DY +PLL E
Sbjct: 999 EIILQWDYTR-----------NSEYPDDEPIGNYSDVKDFFNSPADYQKVMKPLLLLESW 1047
Query: 78 AQIIQKKDEEEVQEWKLRLVMECGEADGFHL-PSVTYEADEVESISPNDLLLLSK-EEFK 135
+ +D E+ + + + + +D + + SV + + IS +DL++++ +F+
Sbjct: 1048 QGLCSSRDREDYKPFSIIVGNRTAVSDFYDVYASVAKQVIQDCGISESDLIVMAYLPDFR 1107
Query: 136 EGSTFPTTYAFALVEH-CQANLLRLRMYLAGEV-----IHINKDAVKSQRLLNIHSLITS 189
++ F +H C A + L+ G V IH N HS S
Sbjct: 1108 PDKRL-SSDDFKKAQHTCLAKVRTLKNTKGGNVDVTLRIHRN------------HSF--S 1152
Query: 190 SVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLL 249
+ ++ +K+ ++TI REY L + IL A + D +
Sbjct: 1153 KFLTLRSEIYCVKVMQMTTIEREYSTLEGLEYYDLVGQILQAKPSPPVNVDAAEI----- 1207
Query: 250 HEYIKENH--NASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSK 307
E +K+++ N SQ EAI + ++ F LIQGPPGTGKT+TILG++ L A +
Sbjct: 1208 -ETVKKSYKLNTSQAEAIVNSVSKEGFSLIQGPPGTGKTKTILGIIGYFLSTKNASSSN- 1265
Query: 308 GGLREIKRGPELPMHEKYNHWGRASPWLVGA--NPRDNIMPIDGDDGFFPTTGNELKPEV 365
+ + P + L+ A N + + + G + G++ KP++
Sbjct: 1266 -----VIKVPLEKNSSNTEQLLKKQKILICAPSNAAVDEICLRLKSGVYDKQGHQFKPQL 1320
Query: 366 VNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRS-------------------- 405
V R R V+ A + L+E+V + + G R+ IR+
Sbjct: 1321 V---RVGRSDVVNVAIKDLTLEELVDKRI--GERNYEIRTDPELERKFNNAVTKRRELRG 1375
Query: 406 -------------YTPKIVRIGLKAHHSVNSVAIDHLVEQKRDDSAADKQKHGATRKDRD 452
T I ++ LK + ++ + D ++K+ ++RD
Sbjct: 1376 KLDSESGNPESPMSTEDISKLQLKIRE------LSKIINELGRDRDEMREKNSVNYRNRD 1429
Query: 453 ----SIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGC 508
+ ++ IL + I+CSTLS S +L+ + FD VIIDEA Q E ++++PL G
Sbjct: 1430 LDRRNAQAHILAVSDIICSTLSGSAHDVLATMGIKFDTVIIDEACQCTELSSIIPLRYGG 1489
Query: 509 KQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSR 568
K+ +VGDP QLP TV+S A + Y SLF R+++ P +L QYRMHP + FPS
Sbjct: 1490 KRCIMVGDPNQLPPTVLSGAASNFKYNQSLFVRMEKNSSPY-LLDVQYRMHPSISKFPSS 1548
Query: 569 EFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLL 628
EFY L+DG ++ R WH+ P+ FFDI G++ Q A + S+ N++E+ +
Sbjct: 1549 EFYQGRLKDGPGMDILNKRPWHQLEPLAPYKFFDIISGRQEQNAKTMSYTNMEEIRVAIE 1608
Query: 629 LFHKLISMY-PQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGRE 687
L L + ++ + ++ IISPYR Q+++ ++ F FG K +D T+DG QG+E
Sbjct: 1609 LVDYLFRKFDNKIDFTGKIGIISPYREQMQKMRKEFARYFGGMINKSIDFNTIDGFQGQE 1668
Query: 688 KDVAIFSCVRASD-KKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSA 746
K++ + SCVRA D K S+GFL D+RRMNV +TRAK+SI V+G +L + K W +L++ A
Sbjct: 1669 KEIILISCVRADDTKSSVGFLKDFRRMNVALTRAKTSIWVLGHQRSLAKSKLWRDLIEDA 1728
Query: 747 EKQDCL 752
+ + CL
Sbjct: 1729 KDRSCL 1734
>gi|190405466|gb|EDV08733.1| nuclear-localized tRNA splicing complex component [Saccharomyces
cerevisiae RM11-1a]
Length = 2231
Score = 303 bits (775), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 232/784 (29%), Positives = 376/784 (47%), Gaps = 98/784 (12%)
Query: 19 KIILGWDYFRLVKESQERNDKNSKKVDRGKLG-LREVKDTYKDVDDYLATFEPLLFEEVK 77
+IIL WDY R NS+ D +G +VKD + DY +PLL E
Sbjct: 1118 EIILQWDYTR-----------NSEYPDDEPIGNYSDVKDFFNSPADYQKVMKPLLLLESW 1166
Query: 78 AQIIQKKDEEEVQEWKLRLVMECGEADGFHL-PSVTYEADEVESISPNDLLLLSK-EEFK 135
+ +D E+ + + + + +D + + SV + + IS +DL++++ +F+
Sbjct: 1167 QGLCSSRDREDYKPFSIIVGNRTAVSDFYDVYASVAKQVIQDCGISESDLIVMAYLPDFR 1226
Query: 136 EGSTFPTTYAFALVEH-CQANLLRLRMYLAGEV-----IHINKDAVKSQRLLNIHSLITS 189
++ F +H C A + L+ G V IH N HS S
Sbjct: 1227 PDKRL-SSDDFKKAQHTCLAKVRTLKNTKGGNVDVTLRIHRN------------HSF--S 1271
Query: 190 SVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLL 249
+ ++ +K+ ++TI REY L + IL A + D +
Sbjct: 1272 KFLTLRSEIYCVKVMQMTTIEREYSTLEGLEYYDLVGQILQAKPSPPVNVDAAEI----- 1326
Query: 250 HEYIKENH--NASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSK 307
E +K+++ N SQ EAI + ++ F LIQGPPGTGKT+TILG++ L A +
Sbjct: 1327 -ETVKKSYKLNTSQAEAIVNSVSKEGFSLIQGPPGTGKTKTILGIIGYFLSTKNASSSNV 1385
Query: 308 GGLREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVN 367
+ K K +P +N + + + G + G++ KP++V
Sbjct: 1386 IKVPLEKNSSNTEQLLKKQKILICAP----SNAAVDEICLRLKSGVYDKQGHQFKPQLV- 1440
Query: 368 SSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRS---------------------- 405
R R V+ A + L+E+V + + G R+ IR+
Sbjct: 1441 --RVGRSDVVNVAIKDLTLEELVDKRI--GERNYEIRTDPELERKFNNAVTKRRELRGKL 1496
Query: 406 -----------YTPKIVRIGLKAHHSVNSVAIDHLVEQKRDDSAADKQKHGATRKDRD-- 452
T I ++ LK + ++ + D ++K+ ++RD
Sbjct: 1497 DSESGNPESPMSTEDISKLQLKIRE------LSKIINELGRDRDEMREKNSVNYRNRDLD 1550
Query: 453 --SIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQ 510
+ ++ IL + I+CSTLS S +L+ + FD VIIDEA Q E ++++PL G K+
Sbjct: 1551 RRNAQAHILAVSDIICSTLSGSAHDVLATMGIKFDTVIIDEACQCTELSSIIPLRYGGKR 1610
Query: 511 VFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREF 570
+VGDP QLP TV+S A + Y SLF R+++ P +L QYRMHP + FPS EF
Sbjct: 1611 CIMVGDPNQLPPTVLSGAASNFKYNQSLFVRMEKNSSPY-LLDVQYRMHPSISKFPSSEF 1669
Query: 571 YDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
Y L+DG ++ R WH+ P+ FFDI G++ Q A + S+ N++E+ + L
Sbjct: 1670 YQGRLKDGPGMDILNKRPWHQLEPLAPYKFFDIISGRQEQNAKTMSYTNMEEIRVAIELV 1729
Query: 631 HKLISMY-PQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKD 689
L + ++ + ++ IISPYR Q+++ ++ F FG K +D T+DG QG+EK+
Sbjct: 1730 DYLFRKFDNKIDFTGKIGIISPYREQMQKMRKEFARYFGGMINKSIDFNTIDGFQGQEKE 1789
Query: 690 VAIFSCVRASD-KKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEK 748
+ + SCVRA D K S+GFL D+RRMNV +TRAK+SI V+G +L + K W +L++ A+
Sbjct: 1790 IILISCVRADDTKSSVGFLKDFRRMNVALTRAKTSIWVLGHQRSLAKSKLWRDLIEDAKD 1849
Query: 749 QDCL 752
+ CL
Sbjct: 1850 RSCL 1853
>gi|259148407|emb|CAY81654.1| Sen1p [Saccharomyces cerevisiae EC1118]
Length = 2230
Score = 303 bits (775), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 232/784 (29%), Positives = 376/784 (47%), Gaps = 98/784 (12%)
Query: 19 KIILGWDYFRLVKESQERNDKNSKKVDRGKLG-LREVKDTYKDVDDYLATFEPLLFEEVK 77
+IIL WDY R NS+ D +G +VKD + DY +PLL E
Sbjct: 1117 EIILQWDYTR-----------NSEYPDDEPIGNYSDVKDFFNSPADYQKVMKPLLLLESW 1165
Query: 78 AQIIQKKDEEEVQEWKLRLVMECGEADGFHL-PSVTYEADEVESISPNDLLLLSK-EEFK 135
+ +D E+ + + + + +D + + SV + + IS +DL++++ +F+
Sbjct: 1166 QGLCSSRDREDYKPFSIIVGNRTAVSDFYDVYASVAKQVIQDCGISESDLIVMAYLPDFR 1225
Query: 136 EGSTFPTTYAFALVEH-CQANLLRLRMYLAGEV-----IHINKDAVKSQRLLNIHSLITS 189
++ F +H C A + L+ G V IH N HS S
Sbjct: 1226 PDKRL-SSDDFKKAQHTCLAKVRTLKNTKGGNVDVTLRIHRN------------HSF--S 1270
Query: 190 SVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLL 249
+ ++ +K+ ++TI REY L + IL A + D +
Sbjct: 1271 KFLTLRSEIYCVKVMQMTTIEREYSTLEGLEYYDLVGQILQAKPSPPVNVDAAEI----- 1325
Query: 250 HEYIKENH--NASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSK 307
E +K+++ N SQ EAI + ++ F LIQGPPGTGKT+TILG++ L A +
Sbjct: 1326 -ETVKKSYKLNTSQAEAIVNSVSKEGFSLIQGPPGTGKTKTILGIIGYFLSTKNASSSNV 1384
Query: 308 GGLREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVN 367
+ K K +P +N + + + G + G++ KP++V
Sbjct: 1385 IKVPLEKNSSNTEQLLKKQKILICAP----SNAAVDEICLRLKSGVYDKQGHQFKPQLV- 1439
Query: 368 SSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRS---------------------- 405
R R V+ A + L+E+V + + G R+ IR+
Sbjct: 1440 --RVGRSDVVNVAIKDLTLEELVDKRI--GERNYEIRTDPELERKFNNAVTKRRELRGKL 1495
Query: 406 -----------YTPKIVRIGLKAHHSVNSVAIDHLVEQKRDDSAADKQKHGATRKDRD-- 452
T I ++ LK + ++ + D ++K+ ++RD
Sbjct: 1496 DSESGNPESPMSTEDISKLQLKIRE------LSKIINELGRDRDEMREKNSVNYRNRDLD 1549
Query: 453 --SIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQ 510
+ ++ IL + I+CSTLS S +L+ + FD VIIDEA Q E ++++PL G K+
Sbjct: 1550 RRNAQAHILAVSDIICSTLSGSAHDVLATMGIKFDTVIIDEACQCTELSSIIPLRYGGKR 1609
Query: 511 VFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREF 570
+VGDP QLP TV+S A + Y SLF R+++ P +L QYRMHP + FPS EF
Sbjct: 1610 CIMVGDPNQLPPTVLSGAASNFKYNQSLFVRMEKNSSPY-LLDVQYRMHPSISKFPSSEF 1668
Query: 571 YDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
Y L+DG ++ R WH+ P+ FFDI G++ Q A + S+ N++E+ + L
Sbjct: 1669 YQGRLKDGPGMDILNKRPWHQLEPLAPYKFFDIISGRQEQNAKTMSYTNMEEIRVAIELV 1728
Query: 631 HKLISMY-PQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKD 689
L + ++ + ++ IISPYR Q+++ ++ F FG K +D T+DG QG+EK+
Sbjct: 1729 DYLFRKFDNKIDFTGKIGIISPYREQMQKMRKEFARYFGGMINKSIDFNTIDGFQGQEKE 1788
Query: 690 VAIFSCVRASD-KKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEK 748
+ + SCVRA D K S+GFL D+RRMNV +TRAK+SI V+G +L + K W +L++ A+
Sbjct: 1789 IILISCVRADDTKSSVGFLKDFRRMNVALTRAKTSIWVLGHQRSLAKSKLWRDLIEDAKD 1848
Query: 749 QDCL 752
+ CL
Sbjct: 1849 RSCL 1852
>gi|256271104|gb|EEU06199.1| Sen1p [Saccharomyces cerevisiae JAY291]
Length = 2231
Score = 303 bits (775), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 232/784 (29%), Positives = 376/784 (47%), Gaps = 98/784 (12%)
Query: 19 KIILGWDYFRLVKESQERNDKNSKKVDRGKLG-LREVKDTYKDVDDYLATFEPLLFEEVK 77
+IIL WDY R NS+ D +G +VKD + DY +PLL E
Sbjct: 1118 EIILQWDYTR-----------NSEYPDDEPIGNYSDVKDFFNSPADYQKVMKPLLLLESW 1166
Query: 78 AQIIQKKDEEEVQEWKLRLVMECGEADGFHL-PSVTYEADEVESISPNDLLLLSK-EEFK 135
+ +D E+ + + + + +D + + SV + + IS +DL++++ +F+
Sbjct: 1167 QGLCSSRDREDYKPFSIIVGNRTAVSDFYDVYASVAKQVIQDCGISESDLIVMAYLPDFR 1226
Query: 136 EGSTFPTTYAFALVEH-CQANLLRLRMYLAGEV-----IHINKDAVKSQRLLNIHSLITS 189
++ F +H C A + L+ G V IH N HS S
Sbjct: 1227 PDKRL-SSDDFKKAQHTCLAKVRTLKNTKGGNVDVTLRIHRN------------HSF--S 1271
Query: 190 SVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLL 249
+ ++ +K+ ++TI REY L + IL A + D +
Sbjct: 1272 KFLTLRSEIYCVKVMQMTTIEREYSTLEGLEYYDLVGQILQAKPSPPVNVDAAEI----- 1326
Query: 250 HEYIKENH--NASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSK 307
E +K+++ N SQ EAI + ++ F LIQGPPGTGKT+TILG++ L A +
Sbjct: 1327 -ETVKKSYKLNTSQAEAIVNSVSKEGFSLIQGPPGTGKTKTILGIIGYFLSTKNASSSNV 1385
Query: 308 GGLREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVN 367
+ K K +P +N + + + G + G++ KP++V
Sbjct: 1386 IKVPLEKNSSNTEQLLKKQKILICAP----SNAAVDEICLRLKSGVYDKQGHQFKPQLV- 1440
Query: 368 SSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRS---------------------- 405
R R V+ A + L+E+V + + G R+ IR+
Sbjct: 1441 --RVGRSDVVNVAIKDLTLEELVDKRI--GERNYEIRTDPELERKFNNAVTKRRELRGKL 1496
Query: 406 -----------YTPKIVRIGLKAHHSVNSVAIDHLVEQKRDDSAADKQKHGATRKDRD-- 452
T I ++ LK + ++ + D ++K+ ++RD
Sbjct: 1497 DSESGNPESPMSTEDISKLQLKIRE------LSKIINELGRDRDEMREKNSVNYRNRDLD 1550
Query: 453 --SIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQ 510
+ ++ IL + I+CSTLS S +L+ + FD VIIDEA Q E ++++PL G K+
Sbjct: 1551 RRNAQAHILAVSDIICSTLSGSAHDVLATMGIKFDTVIIDEACQCTELSSIIPLRYGGKR 1610
Query: 511 VFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREF 570
+VGDP QLP TV+S A + Y SLF R+++ P +L QYRMHP + FPS EF
Sbjct: 1611 CIMVGDPNQLPPTVLSGAASNFKYNQSLFVRMEKNSSPY-LLDVQYRMHPSISKFPSSEF 1669
Query: 571 YDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
Y L+DG ++ R WH+ P+ FFDI G++ Q A + S+ N++E+ + L
Sbjct: 1670 YQGRLKDGPGMDILNKRPWHQLEPLAPYKFFDIISGRQEQNAKTMSYTNMEEIRVAIELV 1729
Query: 631 HKLISMY-PQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKD 689
L + ++ + ++ IISPYR Q+++ ++ F FG K +D T+DG QG+EK+
Sbjct: 1730 DYLFRKFDNKIDFTGKIGIISPYREQMQKMRKEFARYFGGMINKSIDFNTIDGFQGQEKE 1789
Query: 690 VAIFSCVRASD-KKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEK 748
+ + SCVRA D K S+GFL D+RRMNV +TRAK+SI V+G +L + K W +L++ A+
Sbjct: 1790 IILISCVRADDTKSSVGFLKDFRRMNVALTRAKTSIWVLGHQRSLAKSKLWRDLIEDAKD 1849
Query: 749 QDCL 752
+ CL
Sbjct: 1850 RSCL 1853
>gi|349580123|dbj|GAA25284.1| K7_Sen1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 2233
Score = 302 bits (774), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 232/784 (29%), Positives = 376/784 (47%), Gaps = 98/784 (12%)
Query: 19 KIILGWDYFRLVKESQERNDKNSKKVDRGKLG-LREVKDTYKDVDDYLATFEPLLFEEVK 77
+IIL WDY R NS+ D +G +VKD + DY +PLL E
Sbjct: 1120 EIILQWDYTR-----------NSEYPDDEPIGNYSDVKDFFNSPADYQKVMKPLLLLESW 1168
Query: 78 AQIIQKKDEEEVQEWKLRLVMECGEADGFHL-PSVTYEADEVESISPNDLLLLSK-EEFK 135
+ +D E+ + + + + +D + + SV + + IS +DL++++ +F+
Sbjct: 1169 QGLCSSRDREDYKPFSIIVGNRTAVSDFYDVYASVAKQVIQDCGISESDLIVMAYLPDFR 1228
Query: 136 EGSTFPTTYAFALVEH-CQANLLRLRMYLAGEV-----IHINKDAVKSQRLLNIHSLITS 189
++ F +H C A + L+ G V IH N HS S
Sbjct: 1229 PDKRL-SSDDFKKAQHTCLAKVRTLKNTKGGNVDVTLRIHRN------------HSF--S 1273
Query: 190 SVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLL 249
+ ++ +K+ ++TI REY L + IL A + D +
Sbjct: 1274 KFLTLRSEIYCVKVMQMTTIEREYSTLEGLEYYDLVGQILQAKPSPPVNVDAAEI----- 1328
Query: 250 HEYIKENH--NASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSK 307
E +K+++ N SQ EAI + ++ F LIQGPPGTGKT+TILG++ L A +
Sbjct: 1329 -ETVKKSYKLNTSQAEAIVNSVSKEGFSLIQGPPGTGKTKTILGIIGYFLSTKNASSSNV 1387
Query: 308 GGLREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVN 367
+ K K +P +N + + + G + G++ KP++V
Sbjct: 1388 IKVPLEKNSSNTEQLLKKQKILICAP----SNAAVDEICLRLKSGVYDKQGHQFKPQLV- 1442
Query: 368 SSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRS---------------------- 405
R R V+ A + L+E+V + + G R+ IR+
Sbjct: 1443 --RVGRSDVVNVAIKDLTLEELVDKRI--GERNYEIRTDPELERKFNNAVTKRRELRGKL 1498
Query: 406 -----------YTPKIVRIGLKAHHSVNSVAIDHLVEQKRDDSAADKQKHGATRKDRD-- 452
T I ++ LK + ++ + D ++K+ ++RD
Sbjct: 1499 DSESGNPESPMSTEDISKLQLKIRE------LSKIINELGRDRDEMREKNSVNYRNRDLD 1552
Query: 453 --SIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQ 510
+ ++ IL + I+CSTLS S +L+ + FD VIIDEA Q E ++++PL G K+
Sbjct: 1553 RRNAQAHILAVSDIICSTLSGSAHDVLATMGIKFDTVIIDEACQCTELSSIIPLRYGGKR 1612
Query: 511 VFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREF 570
+VGDP QLP TV+S A + Y SLF R+++ P +L QYRMHP + FPS EF
Sbjct: 1613 CIMVGDPNQLPPTVLSGAASNFKYNQSLFVRMEKNSSPY-LLDVQYRMHPSISKFPSSEF 1671
Query: 571 YDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
Y L+DG ++ R WH+ P+ FFDI G++ Q A + S+ N++E+ + L
Sbjct: 1672 YQGRLKDGPGMDILNKRPWHQLEPLAPYKFFDIISGRQEQNAKTMSYTNMEEIRVAIELV 1731
Query: 631 HKLISMY-PQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKD 689
L + ++ + ++ IISPYR Q+++ ++ F FG K +D T+DG QG+EK+
Sbjct: 1732 DYLFRKFDNKIDFTGKIGIISPYREQMQKMRKEFARYFGGMINKSIDFNTIDGFQGQEKE 1791
Query: 690 VAIFSCVRASD-KKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEK 748
+ + SCVRA D K S+GFL D+RRMNV +TRAK+SI V+G +L + K W +L++ A+
Sbjct: 1792 IILISCVRADDTKSSVGFLKDFRRMNVALTRAKTSIWVLGHQRSLAKSKLWRDLIEDAKD 1851
Query: 749 QDCL 752
+ CL
Sbjct: 1852 RSCL 1855
>gi|342873257|gb|EGU75464.1| hypothetical protein FOXB_14012 [Fusarium oxysporum Fo5176]
Length = 2080
Score = 302 bits (774), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 238/774 (30%), Positives = 362/774 (46%), Gaps = 84/774 (10%)
Query: 16 RFCKIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEE 75
R IL WD F ND + EV Y + Y TF PLL E
Sbjct: 1129 RLHNTILAWDIF------HGGNDPPNGP------AASEVATKYSEPRTYQDTFFPLLASE 1176
Query: 76 VKAQIIQKKDEEEVQEWKLRLVMECG-----EADGFHLPSVTYEADEVESISPNDLLLLS 130
+ KDE Q + +++ EA F +P V +S D+LL+S
Sbjct: 1177 AWRSFVTAKDELTSQPFGMKIASRASVDSYLEAT-FTMPVVQSRE---RGVSEGDILLVS 1232
Query: 131 KEEFKEGSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSS 190
+ E HC A + R+ E+I I + R + ++T +
Sbjct: 1233 ESE--------QPLIDQTARHCLARVHRI--TYKKELIEITYRV--ASRNNPMTQVLTPN 1280
Query: 191 VSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLH 250
VS +F +KI +++TI RE+ AL S+ D IL+A E S Q KI ++
Sbjct: 1281 VS-----VFGVKITNMTTIEREFAALESLPYYDLMDEILNA-EPSPILQYGDEKINNCMN 1334
Query: 251 EYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGL 310
Y A+ + H+ F LIQGPPGTGKT+TI+ ++ +L ++ ++G
Sbjct: 1335 NYALNRGQATAVLGAHDN---DGFTLIQGPPGTGKTKTIVAMVGTLLSEQLSQSGNQGIP 1391
Query: 311 REIKRGPE-LPMHEKYNHWGRASPWLVGA--NPRDNIMPIDGDDGFFPTTGNELKPEVVN 367
+ P P K N R+ LV A N + + + G +G K + +N
Sbjct: 1392 VGVPLRPNGAPGAPKQN---RSKKLLVCAPSNAAVDELVLRLKAGVKTISG---KTKNIN 1445
Query: 368 SSRRYRVRVLVCAPSNSALDEIVLRLL------------------NTGIRDENIRSYTPK 409
R R + A + LDE+V + N G E + P+
Sbjct: 1446 VLRLGRSDAINAAVRDVTLDELVKARMEGDQTKDKAKADRDQLHENAGKVKEELGKLRPQ 1505
Query: 410 IVRIGLKAHHSVNSVAIDHLVEQKRDDSA------ADKQKHGATRKD----RDSIRSAIL 459
+ L ++ + E KR + ADK + ++ R ++ IL
Sbjct: 1506 LEAAKLMDDRTLYNKLSREFDELKRRQMSYGKQIDADKSSGNSVAREMEMRRRQVQQEIL 1565
Query: 460 NEAVIVCSTLSFSGSALLSKLNH-GFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPV 518
N A ++C+TLS SG + L F+ VIIDEAAQ VE + L+PL GC + LVGDP
Sbjct: 1566 NNAQVLCATLSGSGHEMFRNLEDVEFETVIIDEAAQCVELSALIPLKYGCYKCILVGDPK 1625
Query: 519 QLPATVISPVAEHLGYGTSLFKRLQRAGYP--VKMLKTQYRMHPEVRSFPSREFYDEALE 576
QLP TV+S A GY SLF R+Q+ +P V +L QYRMHPE+ FPSREFY+ L
Sbjct: 1626 QLPPTVLSQSAAKFGYDQSLFVRMQQ-NHPRSVHLLDMQYRMHPEISLFPSREFYEGQLA 1684
Query: 577 DGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISM 636
DG ++ + + WH+ GP+ FFD+ +E G S +N E+D + ++ + +
Sbjct: 1685 DGQNMHELRQQPWHKSALLGPYRFFDVQGVQERGHKGQ-SLVNTKELDVAIQMYDRFSNE 1743
Query: 637 YPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCV 696
Y + + ++ II+PY+ Q+ + + RF+ +G +++ T D QGRE ++ IFSCV
Sbjct: 1744 YRECDLTGKIGIITPYKAQLYELRNRFRSRYGENITSIIEFNTTDAFQGRECEIIIFSCV 1803
Query: 697 RASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQD 750
RAS IGF+ D RRMNVG+TRAKSS+ ++G + L + + W L++ A+ +D
Sbjct: 1804 RASSTGGIGFMTDIRRMNVGLTRAKSSLWILGDSRALVQGEFWRKLIEDAQARD 1857
>gi|145247364|ref|XP_001395931.1| tRNA-splicing endonuclease [Aspergillus niger CBS 513.88]
gi|134080665|emb|CAK41330.1| unnamed protein product [Aspergillus niger]
Length = 2116
Score = 302 bits (774), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 249/776 (32%), Positives = 370/776 (47%), Gaps = 100/776 (12%)
Query: 19 KIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKA 78
+ IL WD+F + G+ V + ++D +Y TFEPLL E
Sbjct: 1081 RTILAWDFF----------TNGDLPPNSGRTDYSLVSNAFRDPIEYQRTFEPLLILEAWQ 1130
Query: 79 QIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADEVE--SISPNDLLLLSKEEFKE 136
K+E + +++++ D F S A E + + D++LLSK
Sbjct: 1131 GFQSSKEEGTFKPFEVKVATRLS-VDSFVEVSTAIPAMEAKDFGLGEADIVLLSKASSPT 1189
Query: 137 G-STFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLN-----IHSLITSS 190
G S+ P HC A + I+ K V+ +N I+SL +
Sbjct: 1190 GDSSAP---------HCLARV---------SGINRKKGMVEISYRVNPGNPFINSLGPGA 1231
Query: 191 VSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLH 250
+ ++ KI SL+ + REY AL ++ + I+ A S + P +
Sbjct: 1232 I------IWGAKITSLTPLEREYGALMALQYYDLCEEIVRAKPSPILSYSDASLKP-IAD 1284
Query: 251 EYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGL 310
Y N N++Q +AI L AF LIQGPPG+GKT+TI+ A++ A + V G+
Sbjct: 1285 NY---NVNSAQAKAIKSALDNDAFTLIQGPPGSGKTKTIV----ALVGALLSNVLGNQGV 1337
Query: 311 REIKRGPELPMHEKYNHWGRASP---WLVGA--NPRDNIMPIDGDDGFFPTTGNELKPEV 365
I R PM GR + LV A N + + + +G G + K V
Sbjct: 1338 -AISR----PMGNAKPAGGRTTTSKKLLVCAPSNAAVDELVMRFKEGVKTIHGRQEKLSV 1392
Query: 366 VNSSRRYRVRVLVCAPSNSALDEIVLRLLNT------GIRD---------------ENIR 404
+ R + V + LDE+V LN G RD + R
Sbjct: 1393 IRLGRSDAINTNVL---DVTLDELVNARLNQTARKDPGERDLQKIYMEHKAADTAFKETR 1449
Query: 405 SYTPKIVRIGLKAHHSVNSVAIDHLVEQKRD-----DSAADKQKHGATRK---DRDSIRS 456
+ + GL + D L ++K DSA DK H A R R I+
Sbjct: 1450 ARMDQCRAQGLPVPAELER-EFDLLKKKKTQLSQEIDSARDKN-HSAARDAELTRRRIQQ 1507
Query: 457 AILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGD 516
I++ A ++C+TLS SG + L+ F+ V+IDEAAQ++E + L+PL GC + LVGD
Sbjct: 1508 EIIDGAHVICATLSGSGHEMFQNLSIEFETVVIDEAAQSIELSALIPLKYGCSKCILVGD 1567
Query: 517 PVQLPATVISPVAEHLGYGTSLFKRLQRAGYP--VKMLKTQYRMHPEVRSFPSREFYDEA 574
P QLP TV+S VA Y SLF R+Q A +P V +L QYRMHPE+ +FPS FYD
Sbjct: 1568 PKQLPPTVLSKVASKFQYEQSLFVRMQ-ANHPRDVHLLDIQYRMHPEISAFPSSAFYDGR 1626
Query: 575 LEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLI 634
L+DG ++ R WH+ P+ FFD+ +G A S INI E+ + L+ +L+
Sbjct: 1627 LQDGPNMAQLRVRPWHQSELLSPYRFFDV-QGLHQSAAKGHSLINIAELRVAMQLYERLV 1685
Query: 635 SMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFS 694
+ + ++ II+PY+ Q+++ + +F +G E +D T D QGRE +V IFS
Sbjct: 1686 TDFRAFNFDRKIGIITPYKGQLRELKTQFAARYGNEIFNKIDFNTTDAFQGRESEVIIFS 1745
Query: 695 CVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQD 750
CVRAS+ K IGFLAD RRMNVG+TRAKSS+ V+G + L + + WN L+K A +++
Sbjct: 1746 CVRASN-KGIGFLADIRRMNVGLTRAKSSLWVLGNSQALVQGEFWNGLIKDARRRN 1800
>gi|350637189|gb|EHA25547.1| hypothetical protein ASPNIDRAFT_42089 [Aspergillus niger ATCC 1015]
Length = 2051
Score = 302 bits (774), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 249/778 (32%), Positives = 371/778 (47%), Gaps = 104/778 (13%)
Query: 19 KIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKA 78
+ IL WD+F + G+ V + ++D +Y TFEPLL E
Sbjct: 1081 RTILAWDFF----------TNGDLPPNSGRTDYSLVSNAFRDPIEYQRTFEPLLILEAWQ 1130
Query: 79 QIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADEVE--SISPNDLLLLSKEEFKE 136
K+E + +++++ D F S A E + + D++LLSK
Sbjct: 1131 GFQSSKEEGTFKPFEVKVATRLS-VDSFVEVSTAIPAMEAKDFGLGEADIVLLSKASSPT 1189
Query: 137 G-STFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLN-----IHSLITSS 190
G S+ P HC A + I+ K V+ +N I+SL +
Sbjct: 1190 GDSSAP---------HCLARV---------SGINRKKGMVEISYRVNPGNPFINSLGPGA 1231
Query: 191 VSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLH 250
+ ++ KI SL+ + REY AL ++ + I+ A S + P
Sbjct: 1232 I------IWGAKITSLTPLEREYGALMALQYYDLCEEIVRAKPSPILSYSDASLKP---- 1281
Query: 251 EYIKENHN--ASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKG 308
I +N+N ++Q +AI L AF LIQGPPG+GKT+TI+ A++ A + V
Sbjct: 1282 --IADNYNVNSAQAKAIKSALDNDAFTLIQGPPGSGKTKTIV----ALVGALLSNVLGNQ 1335
Query: 309 GLREIKRGPELPMHEKYNHWGRASP---WLVGA--NPRDNIMPIDGDDGFFPTTGNELKP 363
G+ I R PM GR + LV A N + + + +G G + K
Sbjct: 1336 GV-AISR----PMGNAKPAGGRTTTSKKLLVCAPSNAAVDELVMRFKEGVKTIHGRQEKL 1390
Query: 364 EVVNSSRRYRVRVLVCAPSNSALDEIVLRLLNT------GIRD---------------EN 402
V+ R + V + LDE+V LN G RD +
Sbjct: 1391 SVIRLGRSDAINTNVL---DVTLDELVNARLNQTARKDPGERDLQKIYMEHKAADTAFKE 1447
Query: 403 IRSYTPKIVRIGLKAHHSVNSVAIDHLVEQKRD-----DSAADKQKHGATRK---DRDSI 454
R+ + GL + D L ++K DSA DK H A R R I
Sbjct: 1448 TRARMDQCRAQGLPVPAELER-EFDLLKKKKTQLSQEIDSARDKN-HSAARDAELTRRRI 1505
Query: 455 RSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLV 514
+ I++ A ++C+TLS SG + L+ F+ V+IDEAAQ++E + L+PL GC + LV
Sbjct: 1506 QQEIIDGAHVICATLSGSGHEMFQNLSIEFETVVIDEAAQSIELSALIPLKYGCSKCILV 1565
Query: 515 GDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYP--VKMLKTQYRMHPEVRSFPSREFYD 572
GDP QLP TV+S VA Y SLF R+Q A +P V +L QYRMHPE+ +FPS FYD
Sbjct: 1566 GDPKQLPPTVLSKVASKFQYEQSLFVRMQ-ANHPRDVHLLDIQYRMHPEISAFPSSAFYD 1624
Query: 573 EALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHK 632
L+DG ++ R WH+ P+ FFD+ +G A S INI E+ + L+ +
Sbjct: 1625 GRLQDGPNMAQLRVRPWHQSELLSPYRFFDV-QGLHQSAAKGHSLINIAELRVAMQLYER 1683
Query: 633 LISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAI 692
L++ + ++ II+PY+ Q+++ + +F +G E +D T D QGRE +V I
Sbjct: 1684 LVTDFRAFNFDRKIGIITPYKGQLRELKTQFAARYGNEIFNKIDFNTTDAFQGRESEVII 1743
Query: 693 FSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQD 750
FSCVRAS+ K IGFLAD RRMNVG+TRAKSS+ V+G + L + + WN L+K A +++
Sbjct: 1744 FSCVRASN-KGIGFLADIRRMNVGLTRAKSSLWVLGNSQALVQGEFWNGLIKDARRRN 1800
>gi|358371124|dbj|GAA87733.1| tRNA-splicing endonuclease [Aspergillus kawachii IFO 4308]
Length = 2117
Score = 302 bits (774), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 249/778 (32%), Positives = 371/778 (47%), Gaps = 104/778 (13%)
Query: 19 KIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKA 78
+ IL WD+F + G+ V + ++D +Y TFEPLL E
Sbjct: 1081 RTILAWDFFA----------NGDLPPNSGRTDYSLVSNAFRDPVEYQRTFEPLLILEAWQ 1130
Query: 79 QIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADEVE--SISPNDLLLLSKEEFKE 136
K+E + +++++ D F S A E + + D++LLSK
Sbjct: 1131 GFQSSKEEGTFKPFEVKVATRLS-VDSFVEVSTAIPAMEAKDFGLGEADIVLLSKASSPT 1189
Query: 137 G-STFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLN-----IHSLITSS 190
G S+ P HC A + I+ K V+ +N I+SL +
Sbjct: 1190 GDSSAP---------HCLARV---------SGINRKKGMVEISYRVNPGNPFINSLGPGA 1231
Query: 191 VSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLH 250
+ ++ KI SL+ + REY AL ++ + I+ A + + P
Sbjct: 1232 I------IWGAKITSLTPLEREYGALMALQYYDLCEEIVRAKPSPILNYSDASLKP---- 1281
Query: 251 EYIKENH--NASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKG 308
I EN+ N++Q +AI L AF LIQGPPG+GKT+TI+ A++ A + V
Sbjct: 1282 --IAENYTVNSAQAKAIKSALDNDAFTLIQGPPGSGKTKTIV----ALVGALLSNVLGNQ 1335
Query: 309 GLREIKRGPELPMHEKYNHWGRASP---WLVGA--NPRDNIMPIDGDDGFFPTTGNELKP 363
G+ I R PM GR + LV A N + + + +G G + K
Sbjct: 1336 GV-AISR----PMGNAKPAGGRTTTSKKLLVCAPSNAAVDELVMRFKEGVKTIHGRQEKL 1390
Query: 364 EVVNSSRRYRVRVLVCAPSNSALDEIVLRLLNT------GIRD---------------EN 402
V+ R + V + LDE+V LN G RD +
Sbjct: 1391 SVIRLGRSDAINTNVL---DVTLDELVNARLNQTARKDPGERDLQKIYMEHKAADTAFKE 1447
Query: 403 IRSYTPKIVRIGLKAHHSVNSVAIDHLVEQKRD-----DSAADKQKHGATRK---DRDSI 454
R+ + GL + D L ++K DSA DK H A R R I
Sbjct: 1448 TRARMDQCRAQGLPVPAELER-EFDLLKKKKTQLSQEIDSARDKN-HSAARDAELTRRRI 1505
Query: 455 RSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLV 514
+ I++ A ++C+TLS SG + L+ F+ V+IDEAAQ++E + L+PL GC + LV
Sbjct: 1506 QQEIIDGAHVICATLSGSGHEMFQNLSIEFETVVIDEAAQSIELSALIPLKYGCSKCILV 1565
Query: 515 GDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYP--VKMLKTQYRMHPEVRSFPSREFYD 572
GDP QLP TV+S VA Y SLF R+Q A +P V +L QYRMHPE+ +FPS FYD
Sbjct: 1566 GDPKQLPPTVLSKVASKFQYEQSLFVRMQ-ANHPRDVHLLDIQYRMHPEISAFPSSAFYD 1624
Query: 573 EALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHK 632
L+DG ++ R WH+ P+ FFD+ +G A S INI E+ + L+ +
Sbjct: 1625 GRLQDGPNMAQLRVRPWHQSELLSPYRFFDV-QGLHQSAAKGHSLINIAELRVAMQLYER 1683
Query: 633 LISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAI 692
L++ + ++ II+PY+ Q+++ + +F +G E +D T D QGRE +V I
Sbjct: 1684 LVTDFRAFNFDRKIGIITPYKGQLRELKTQFAARYGNEIFNKIDFNTTDAFQGRESEVII 1743
Query: 693 FSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQD 750
FSCVRAS+ K IGFLAD RRMNVG+TRAKSS+ V+G + L + + WN L+K A +++
Sbjct: 1744 FSCVRASN-KGIGFLADIRRMNVGLTRAKSSLWVLGNSQALVQGEFWNGLIKDARRRN 1800
>gi|19115031|ref|NP_594119.1| ATP-dependent 5' to 3' DNA/RNA helicase Sen1 [Schizosaccharomyces
pombe 972h-]
gi|2842700|sp|Q92355.1|SEN1_SCHPO RecName: Full=Helicase sen1
gi|1644322|emb|CAB03612.1| ATP-dependent 5' to 3' DNA/RNA helicase Sen1 [Schizosaccharomyces
pombe]
Length = 1687
Score = 302 bits (773), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 227/739 (30%), Positives = 351/739 (47%), Gaps = 96/739 (12%)
Query: 53 EVKDTYKDVDDYLATFEPLLFEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVT 112
++ D++K V+ Y+ +P++F E +QI Q KL L E +V
Sbjct: 946 KIIDSFKTVEHYMEVLQPMIFMECWSQI---------QSTKLDLKFSPVEGIMVERTAVN 996
Query: 113 YEADEVESISPNDL------------LLLSKEEFKEGSTFPTTYAFALVEHC--QAN--L 156
D S++P DL L +KE+ S+ FA VE Q N L
Sbjct: 997 NFVDIGVSVAPKDLYGYPLYDTEVVSLAFNKED---ASSMKGLCCFAKVERIVRQTNGVL 1053
Query: 157 LRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSAVEKRLFSLKICSLSTIAREYLAL 216
+ LR + E+++ + L+ LK+ +L+T R+Y +
Sbjct: 1054 VVLRTLPSMEILNKLQGNCA---------------------LWFLKLTNLATFTRQYAGI 1092
Query: 217 RSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIKENHNASQLEAIHEGLLRKAFVL 276
R + D I+ A S + S +I + Y N Q +AI L F L
Sbjct: 1093 RGLPYFHLADDIIRARPCSQPVKHSSSEIKAAMKRY---QVNEPQAKAIMCALDNNGFTL 1149
Query: 277 IQGPPGTGKTQTILGLLSAIL------HATPARVHSKGG-------------------LR 311
IQGPPGTGKT+TI+G++SA+L H T SK L
Sbjct: 1150 IQGPPGTGKTKTIIGIISALLVDLSRYHITRPNQQSKSTESKQQILLCAPSNAAVDEVLL 1209
Query: 312 EIKRGPELPMHEKY--NHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNSS 369
+KRG L EKY +P + + RD + + + +
Sbjct: 1210 RLKRGFLLENGEKYIPRVVRIGNPETINVSVRDLSLEYQTEKQLLEVNQGAIDLGSLQEL 1269
Query: 370 RRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHL 429
R+R C L++ + + R +G + + +N +L
Sbjct: 1270 TRWRDTFYDCIQKIEELEKQI----------DVARDVAEDTKSLGKELQNKINE---KNL 1316
Query: 430 VEQKRDDSAADK-QKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVI 488
EQK ++ + K+ R + AIL +A +VC+TLS SG L++ + F VI
Sbjct: 1317 AEQKVEELQSQSFTKNKEVDLLRKKAQKAILKQADVVCATLSGSGHDLVAHSSLNFSTVI 1376
Query: 489 IDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRA-GY 547
IDEAAQAVE T++PL G K+ LVGDP QLP TV+S A L Y SLF R+Q+
Sbjct: 1377 IDEAAQAVELDTIIPLRYGAKKCILVGDPNQLPPTVLSKKAASLNYSQSLFVRIQKNFSN 1436
Query: 548 PVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGK 607
+ +L QYRMHP++ FPS++FYD LEDG ++ + T + WH F + FD+ GK
Sbjct: 1437 QMCLLSIQYRMHPDISHFPSKKFYDSRLEDGDNMAEKTQQVWHVNPKFTQYRLFDVR-GK 1495
Query: 608 ESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETF 667
E + + + S N++EV++++ + +L++ +P + + ++ +I+PYR Q+ + + FK +
Sbjct: 1496 E-RTSNTMSTYNLEEVEYLVNMVDELLNKFPDVNFTGRIGVITPYRSQLHELRRAFKVKY 1554
Query: 668 GVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVV 727
G +DI TVDG QG+EKD+ FSCV++ K IGFL D+RR+NV +TRA+SS+L++
Sbjct: 1555 GKSFMSTIDIQTVDGFQGQEKDIIFFSCVKSYSKHGIGFLRDFRRLNVALTRARSSLLII 1614
Query: 728 GCASTLREDKHWNNLVKSA 746
G TL+ D W +LV A
Sbjct: 1615 GNMETLKTDDLWGSLVDDA 1633
>gi|241953325|ref|XP_002419384.1| helicase, putative; tRNA-splicing endonuclease positive effector,
putative [Candida dubliniensis CD36]
gi|223642724|emb|CAX42978.1| helicase, putative [Candida dubliniensis CD36]
Length = 2009
Score = 301 bits (771), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 234/768 (30%), Positives = 373/768 (48%), Gaps = 88/768 (11%)
Query: 52 REVKDTYKDVDDYLATFEPLLFEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGFH--LP 109
+E+KDTYKDV +Y+ EPLL E + + K + + ++L L+ DGF
Sbjct: 1103 QEIKDTYKDVKEYVQVTEPLLMLECWSAMQSAKLTVDEKPFEL-LIGSRTSVDGFFDVFA 1161
Query: 110 SVTYEADEVESISPNDLLLLS------------KEEFKEGSTFPTTYAFALVEHCQANL- 156
S+ + I +DL++L+ + K T ++ ++
Sbjct: 1162 SMEKAVLQDRRIGDSDLVVLALKNESLQHEAEIRRYIKAEDTMTCLAKVQDTKYTNSDYC 1221
Query: 157 -LRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSAVEKRLFSLKICSLSTIAREYLA 215
+ LR+Y +G ++ L S++T +K+ + TI RE+ +
Sbjct: 1222 DVILRVYPSGPMMGA----------LTPKSVVTG-----------MKVMQMITIEREFSS 1260
Query: 216 LRSVGSLPFKDLILSASEKS--SGSQDQSWKIPGLLHEYIKENHNASQLEAIHEGLLRKA 273
L+ + D I+SA+ ++ + K+ + H N SQ AI +
Sbjct: 1261 LKGLQYYDLADSIISATPNKPIEIEEEDAEKMRKIYHV------NDSQARAIMGTFKSEG 1314
Query: 274 FVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLREIKRGPELPMHEKYNHWGRASP 333
F LIQGPPGTGKT+TILG++ L + +I P +P
Sbjct: 1315 FSLIQGPPGTGKTKTILGIVGYSLSQ-----EKNKKVIDISESGSSPAPSDKAKILICAP 1369
Query: 334 WLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNSSRRYRVRVLVCAPSNSALDEIVLRL 393
+N + + + DG ++G + +VV R R + + + L+E+V +
Sbjct: 1370 ----SNAAVDELVLRLRDGVRNSSGEHMPLKVV---RLGRSDAINSSVRDLTLEELVDKE 1422
Query: 394 LNTG----IRDENIRSYTPKIV--RIGLKAHHSVNSVAIDHLVEQKRDDSAADKQKHGAT 447
L T + D NIR K + R L+ + S+ + E + A +K++
Sbjct: 1423 LQTKQTEVVIDPNIRLEHTKCINERDELRKRLATESLEDKDITELEEKIRAINKKRSELA 1482
Query: 448 RK-----------------DRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIID 490
+K +R +I++ IL+EA ++CSTLS S L++ L+ FD VIID
Sbjct: 1483 KKLDEQREKASIANRTKEINRRNIQARILSEAQVLCSTLSGSAHDLVANLSVQFDQVIID 1542
Query: 491 EAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYP-- 548
EA Q +E + ++PL GC++ +VGDP QLP TV+S A Y SLF R+Q+ +P
Sbjct: 1543 EACQCLELSAIIPLRYGCRKCIMVGDPNQLPPTVLSQAAASYNYEQSLFVRMQK-NHPDS 1601
Query: 549 VKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKE 608
V ML QYRMHP + FPS EFY+ L+DG ++ + TR WH+ P+ FFDI GK
Sbjct: 1602 VYMLDVQYRMHPMISKFPSSEFYNSKLKDGDNMLELNTRPWHKDPPLTPYRFFDIL-GKH 1660
Query: 609 SQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFG 668
+ + S N DE L L KL+ + PQ K S + IISPY+ Q+++ +E F +G
Sbjct: 1661 EKNELTRSLFNTDEAMVALQLTDKLMQIIPQDKFSGNVGIISPYKEQIRKIKEVFVRKYG 1720
Query: 669 VESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVG 728
+D TVDG QG+EK++ I SCVRAS ++GFL+D RRMNV +TRAK+++ ++G
Sbjct: 1721 KPILDEIDFNTVDGFQGQEKEIIIMSCVRASATGNVGFLSDVRRMNVALTRAKTTLWILG 1780
Query: 729 CASTLREDKHWNNLVKSAEKQDCLFRVSKPYASFFSDENLESMRKNAT 776
+L ++ W L+ A+++ C V++ Y F + N RK A+
Sbjct: 1781 NKESLSRNEVWRKLLTDADERKC---VTQAYPGFLNSSNPVLKRKEAS 1825
>gi|400600684|gb|EJP68352.1| helicase sen1 [Beauveria bassiana ARSEF 2860]
Length = 3005
Score = 300 bits (769), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 237/778 (30%), Positives = 359/778 (46%), Gaps = 94/778 (12%)
Query: 16 RFCKIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEE 75
R IL WD F +D N G +V Y + Y TF PLL E
Sbjct: 1097 RLHNTILAWDIF---------HDGNEPP---GAPKPFKVDTRYGNPSSYRDTFFPLLASE 1144
Query: 76 VKAQIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADEVE--SISPNDLLLLSKEE 133
+ KDE Q + +++ D + + T E + I D++L+S+ E
Sbjct: 1145 AWKGFVTAKDELTAQAFGIKIASR-ASVDSYLEITFTMEVAQSRERGIGEGDIMLVSEAE 1203
Query: 134 FKEGSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSA 193
HC A + R++ Y + I + A +S L +L+ +++
Sbjct: 1204 --------NPLHDPSARHCLARVHRVK-YKKDRLEIIFRVASRSNPL--GAALLPNTM-- 1250
Query: 194 VEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSAS---------EKSSGSQDQSWK 244
++ +KI +++TI REY AL S+ D IL A EK + Q +W+
Sbjct: 1251 ----MYGIKITNMTTIEREYAALESLQYYDLMDEILKAEPSPILKYGDEKIANYQS-NWQ 1305
Query: 245 IPGLLHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARV 304
+ N Q ++ F LIQGPPGTGKT+TI+ ++ A+L + A+
Sbjct: 1306 L------------NRGQALSVLGAQENDGFTLIQGPPGTGKTKTIVAMVGALLSSQLAQA 1353
Query: 305 HSKGGLREIKRGPELPMHEKYNHWGRASPWLVGA--NPRDNIMPIDGDDGFFPTTGNELK 362
+KG + P P R LV A N + + +G T+G K
Sbjct: 1354 PAKGTPVGV---PIRPGSTNQPTGQRPKKLLVCAPSNAAVDELVTRMKNGIKTTSG---K 1407
Query: 363 PEVVNSSRRYRVRVLVCAPSNSALDEIV-LRLLNTGIRD-----------------ENIR 404
+ +N R R + A + LDE+V R+ +D E +
Sbjct: 1408 MKHINVLRLGRSDAINAAVKDVTLDELVRARMEGDSTKDKVKATKDKLHERASQIKEELG 1467
Query: 405 SYTPKIVRIGLKAHHSVNSVAIDHLVEQKRDDS------AADKQKHGATRKD----RDSI 454
PK+ K + + E KR+ ADK + ++ R I
Sbjct: 1468 ILRPKLDEANEKEDQDYRNKLLRQFDELKREQRDIGKQIEADKDSGNSVAREVEMKRRQI 1527
Query: 455 RSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLV 514
+ ILN A ++C+TLS SG + L+ F+ VIIDEAAQ VE + L+PL GC + LV
Sbjct: 1528 QQEILNNAHVLCATLSGSGHEMFRNLDVEFETVIIDEAAQCVELSALIPLKYGCCKCILV 1587
Query: 515 GDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYP--VKMLKTQYRMHPEVRSFPSREFYD 572
GDP QLP TV+S A GY SLF R+Q+ +P V +L QYRMHPE+ FPS+EFY+
Sbjct: 1588 GDPKQLPPTVLSQSAARFGYDQSLFVRMQQ-NHPNSVHLLDMQYRMHPEISMFPSKEFYE 1646
Query: 573 EALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHK 632
L DG D+ + WH GP+ FFD+ +E G S +N E+D L ++ +
Sbjct: 1647 GQLRDGQDMAGLRQQPWHRSALLGPYRFFDVQGVQERGRRGQ-SLVNTRELDVALQMYDR 1705
Query: 633 LISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAI 692
Y ++ II+PY+ Q+ + + RF+ +G + +++ T D QGRE ++ I
Sbjct: 1706 FRKDYSDCNLVGKIGIITPYKAQLFELRNRFRARYGEDITDIIEFNTTDAFQGRECEIII 1765
Query: 693 FSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQD 750
FSCVRAS IGF+ D RRMNVG+TRAKSS+ ++G + L + + W L++ A+ +D
Sbjct: 1766 FSCVRASATGGIGFMTDIRRMNVGLTRAKSSLWILGDSRALVQGEFWKKLIEDAQSRD 1823
>gi|170089137|ref|XP_001875791.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164649051|gb|EDR13293.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 1937
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 251/813 (30%), Positives = 384/813 (47%), Gaps = 163/813 (20%)
Query: 58 YKDVDDYLATFEPLLFEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGFHLP-SVTYEAD 116
++D Y +EPLL E AQ++Q KDE + ++ ++ +D + S+ +
Sbjct: 1122 FQDYSHYRRVYEPLLLMECWAQLMQSKDEPQ-DIYQCKITSRKFSSDWMDIDLSLLGDVK 1180
Query: 117 EVESISPNDLLLLSKEEFKEGSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVK 176
+ ++ D++LL E K+ S T ++ + L+ +R ++ +
Sbjct: 1181 KDWYLAETDIVLLRSSELKK-SILAKTLSYTTSQG--GILIVVRCFIQAGSLD------- 1230
Query: 177 SQRLLNIHSLITSSVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSS 236
L SSV + K + SLST+ REY AL S+ + D+IL ++
Sbjct: 1231 -------PGLQISSVWRISK------VFSLSTLHREYGALLSLPHYDYCDVILRPRLEAK 1277
Query: 237 GSQDQSWKIPGLLHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAI 296
++ ++ + Y N N Q AI + + F LIQGPPGTGKT TI GL+
Sbjct: 1278 VNKVDQKELQRTMTAY---NVNEPQAAAIISSMEAEGFSLIQGPPGTGKTSTICGLV--- 1331
Query: 297 LHATPARVHSKGGLREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPT 356
AR S+ ++ P +P+ GR +P P +
Sbjct: 1332 -----ARFVSR------RQRPSVPIV-----IGRNAP------------PAE-------- 1355
Query: 357 TGNELKPEVVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSY-TPKIVRIGL 415
KP V ++L+CAPSN+A+DEI RL G +I+ + ++VRIG
Sbjct: 1356 -----KPSVA--------KILICAPSNAAIDEIAHRL--KGGYSGSIKGQGSLRVVRIGA 1400
Query: 416 --KAHHSVNSVAIDHLVEQK---------------------------------------R 434
+ SV +++D LVEQK R
Sbjct: 1401 VQSMNLSVRDISLDSLVEQKLDYSSTPLAEIGNEIKSLHRDIAALKDLRQQKLQDLVAVR 1460
Query: 435 DDSAADK------QKHGATRKD----------------------RDSIRSAILNEAVIVC 466
D+SA K Q G+ R+D R I+ ILNEA +VC
Sbjct: 1461 DNSARTKTLESEVQNLGSKRQDLVTQLNQKKDKLKSDTRSLDTLRRGIQRDILNEADVVC 1520
Query: 467 STLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVIS 526
STLS +G L++ H F+++IIDEAAQA+E ++L+PL + LVGDP QLP TV+S
Sbjct: 1521 STLSGAGHDTLAQ--HDFEMLIIDEAAQAIELSSLIPLKYNSARCVLVGDPQQLPPTVLS 1578
Query: 527 PVAEHLGYGTSLFKRLQ-RAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYT 585
A Y SLF RLQ R V +L QYRMHP++ FPSR FY+ ++DG +++ T
Sbjct: 1579 QEACRYSYNQSLFVRLQKRCPNAVHLLSIQYRMHPDISRFPSRVFYESKIQDGPRMDEVT 1638
Query: 586 TRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWI-NIDEVDFVLLLFHKLISMYPQLKSSS 644
+ WH + FG + FF++ +G E Q SG I N+ E + L+++L Y S
Sbjct: 1639 KQPWHTHVKFGTYKFFNVSQGVEEQ---SGRSIKNLAECQVAVALYNRLCQEYKAFNFDS 1695
Query: 645 QLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDK-KS 703
++ ++S YR Q+ + + F++ FG + +D TVDG QG+EKDV I SCVR+ +S
Sbjct: 1696 RVGVVSMYRAQIVELRRHFEKRFGKDIIGRIDFNTVDGFQGQEKDVIILSCVRSGPGLQS 1755
Query: 704 IGFLADYRRMNVGITRAKSSILVVGCASTL-REDKHWNNLVKSAEKQDCLFRVSKPY--A 760
+GFL+D RRMNV +TRAKSS+ ++G A TL R + W +V A + L +V + +
Sbjct: 1756 VGFLSDVRRMNVALTRAKSSLFILGNAPTLERSNDTWREIVVDARSRLALLQVDTTFFTS 1815
Query: 761 SFFSDENLESMRKNATTDNVQGADGHVPHDDET 793
+ S ++ E +K + VP D T
Sbjct: 1816 TSCSPKSTEPPKKKPRISSASTTAATVPIDLAT 1848
>gi|167390586|ref|XP_001739415.1| splicing endonuclease positive effector sen1 [Entamoeba dispar
SAW760]
gi|165896907|gb|EDR24206.1| splicing endonuclease positive effector sen1, putative [Entamoeba
dispar SAW760]
Length = 1156
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 242/765 (31%), Positives = 375/765 (49%), Gaps = 126/765 (16%)
Query: 58 YKDVDDYLATFEPLLFEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGFH-LPSVTYEAD 116
+K + Y+ F+P+LF+E++A IQK E + + + ++ E G L S+ + +
Sbjct: 102 FKSTEHYINCFKPILFDEIRA-TIQKSLIENEEPFVIEGIINKIEITGNDVLLSLIVKRE 160
Query: 117 EVESISPNDLLLLSKEEFKEGSTFPTTYAFALV------EHCQANLLRLRMYLAGEVIHI 170
E DL+++S F+ G TFP + F + E + + L LR
Sbjct: 161 EWGEF---DLIVVSNVSFETG-TFPKNFPFIIGVVVKKGEEDKESSLTLRCL-------- 208
Query: 171 NKDAVKSQRLLNIHSLITSSVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILS 230
K Q LN +I K+++ KI S+ + AREYL+L ++ L +L
Sbjct: 209 ---KTKEQNNLNFFKIIGKG-----KKVYMRKITSIISSAREYLSLCTIQHLSLIKTLLK 260
Query: 231 ASEKSSGSQDQSWKIPGLLHEYIKENH--NASQLEAIHEGLLRKAFVLIQGPPGTGKTQT 288
S K + S I G + +KE + N+SQ+E I+ L +K F LIQGPPGTGKT+T
Sbjct: 261 PSLKDTSP---SNGIFGKYLQTMKETNIFNSSQIECINSALSKKGFSLIQGPPGTGKTKT 317
Query: 289 ILGLLSAILHATPARVHSKGGLREIKRGPELPMHEKYNHWGRASPWLVGANPR---DNIM 345
+LG+L AI+ PA ++ +G ++ + S LV A D I+
Sbjct: 318 LLGILGAIIFGKPASINKQGTVK-----------------MKHSKILVCAPSNAAVDEIV 360
Query: 346 PIDGDDGFFPTTGNELKPEVVNSSRRYRVRVLVCAPSNSALDEIVL----------RLLN 395
++G G + K ++ R+ A NS ++E+++ R N
Sbjct: 361 LRIQNEGILNGNGKKQKVNII--------RIGNYAGINSKVNEVLIDTLISNELTKRGFN 412
Query: 396 TGIRDENI-----------RSYTPKI----VRIGLKAHHSVNSVA-----IDHL------ 429
R EN+ R+ T +I + + + V+S I+ +
Sbjct: 413 EQKRTENVSSKIASIEQKMRALTKEIEDTVIALNNEKEKVVSSTKENDKKINRIHKYTQT 472
Query: 430 ---VEQKRDDSAADKQKHGATR--------KDRDSIRSAILNEAVIVCSTLSFSGSAL-L 477
+ KRD Q+ + + K R I I EA I+C TL+ SGS + L
Sbjct: 473 LKEMNNKRDAFRVTLQQMKSEKGKIQREFAKIRKEITKQIFEEADILCCTLNTSGSDIFL 532
Query: 478 SKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTS 537
+ + + VI+DEAAQ+VE +TL+PL G ++ L+GDP QLPATVIS A++ GY S
Sbjct: 533 NCVKEKIENVIVDEAAQSVEISTLIPLRFGAERCILIGDPQQLPATVISVAAQNSGYDRS 592
Query: 538 LFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRC--- 594
LF+RL + G V MLK QYRMHP +R FPS++FY L DG RD C
Sbjct: 593 LFERLYKCGVSVDMLKIQYRMHPLIREFPSKQFYSGELIDG--------RDESILPCSID 644
Query: 595 --FGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPY 652
FGP F+D G E + + + N EV V+ L LI YP K + I++PY
Sbjct: 645 KGFGPVVFYDACGGLEERVGQTLA--NEVEVQIVIGLLEGLIKKYPNCKEWD-IGIVTPY 701
Query: 653 RHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASD-KKSIGFLADYR 711
R Q+ + + + ++ + + T+DG QGRE D+ IFSCVR+S K SIGFL+D R
Sbjct: 702 RQQLLLIKIAIESSPLLKEMSKLCVNTIDGFQGREMDIIIFSCVRSSQIKPSIGFLSDIR 761
Query: 712 RMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRVS 756
RMNV +TRAK+++ V+G ++TL +K W ++ +++D + ++
Sbjct: 762 RMNVALTRAKNALWVIGNSNTLCTNKTWKQYIEWLKEKDLIIEIN 806
>gi|302801241|ref|XP_002982377.1| hypothetical protein SELMODRAFT_421714 [Selaginella moellendorffii]
gi|300149969|gb|EFJ16622.1| hypothetical protein SELMODRAFT_421714 [Selaginella moellendorffii]
Length = 1811
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 247/754 (32%), Positives = 356/754 (47%), Gaps = 123/754 (16%)
Query: 51 LREVKDTYKDVDDYLATFEPLLFEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGFHLPS 110
L EV T++ YL F PL FEE KA + + + ++ + + FHL
Sbjct: 321 LLEVPLTFQSYKHYLEIFRPLCFEEFKAHLERSLETMDLSRSDVVTAFSLRQEGYFHL-- 378
Query: 111 VTYEADEVESISPNDLLLLSKEEFKEGSTFPTTYAFALVEHCQANLLRLRMYLAGE-VIH 169
V ++ VE N+LL+ + H L +LR L E H
Sbjct: 379 VEFDGHTVEK--RNNLLVK-----------------VYLPHSCERLSKLREMLVTESTWH 419
Query: 170 INKDAVKSQRLLNIHSLITSSVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLIL 229
+NK + S++T RE A+ ++ P + IL
Sbjct: 420 LNK------------------------------LTSVTTFIREQQAMAAMHLFPLLETIL 449
Query: 230 SASEKSSGSQDQSWKIPGLLHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTI 289
SAS S+ QS +P L ++ +N SQL +I + + LIQGPPGTGKT+TI
Sbjct: 450 SASPPREISRTQS--LPPQLRSKLRREYNESQLSSI-AAVADQMISLIQGPPGTGKTRTI 506
Query: 290 LGLLSAILHATPARVHSKGGLREIKRGPEL---PMHEKYNHWGRASPWLVGANPR---DN 343
LG++SA+L A + + G E ++ K+ +A+ LV A D
Sbjct: 507 LGIVSALL----AHANEEAGKAEEHEMLDVLTDKHQTKFRDKLKATRILVCAQSNAAVDE 562
Query: 344 IMPIDGDDGFFPTTGNELKPEVVNSSRRYRVRVLVCAPSNSALDEIVLRLL--NTGIRD- 400
++ G + G P +V RV A +D +V + + N G+ +
Sbjct: 563 LVTRISKHGVYNYDGGTYWPSIVRVGDTKRVHSQAMAVH---IDRLVAKRMAENAGVHNA 619
Query: 401 ---ENIRSYTPKIV--RIGLKAHHSVNSV-------AIDHLVEQKR----DDSAADKQKH 444
+ +RS +++ L A V S + L EQ+R + + ++H
Sbjct: 620 HSPQELRSKLDEVLGNMQALAAPAEVESQDGIPKLDKLAGLQEQQRLLLSELIKVENREH 679
Query: 445 G----ATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHG------------FDVVI 488
G + RK + +++ +L EA +V +TLS G + S L FD VI
Sbjct: 680 GFLMGSNRKKKQAMKLEVLREADVVLTTLSGCGGHIYSTLMEFIATRDAQAAEMLFDAVI 739
Query: 489 IDEAAQAVEPATLVPL----ATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQR 544
IDEAAQAVEP+TL+PL AT K + L+GDP QLPATV+S A L + S+F+R Q+
Sbjct: 740 IDEAAQAVEPSTLIPLQLLKATRGKCI-LIGDPKQLPATVLSVPASRLLFDCSMFERFQK 798
Query: 545 AGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDV-EDYTTRDWHEYRCFGPFSFFDI 603
GYPV ML TQYRMHPE+RSFPS +Y L+DGS V + +H RCF P+ FFDI
Sbjct: 799 HGYPVSMLTTQYRMHPEIRSFPSTHYYGGQLKDGSTVLHGNRSATFHRERCFEPYRFFDI 858
Query: 604 HEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERF 663
+G+E +P S N DE +F+ L L YP+ ++ +I+PY+ Q K QE
Sbjct: 859 RDGQE-RPGSMQSLTNPDEAEFIFQLLRVLKERYPEEVRPGRIGVITPYQEQRKVLQENM 917
Query: 664 KETFGVESQKVVDITTVDGCQGREKDVAIFSCVRAS---DKKSIGFLADYRRMNVGITRA 720
+ +D+ TVD QGRE D+ + S VRAS + +GFLAD RRMNV +TRA
Sbjct: 918 RSL-----HSGIDVNTVDSFQGREADIIVLSTVRASFGDSQAGVGFLADVRRMNVALTRA 972
Query: 721 KSSILVVGCASTLREDKHWNNLVKSAEKQDCLFR 754
K S+ VVG A TL + W L+ QDC R
Sbjct: 973 KFSLWVVGNARTLERNPDWKALL-----QDCRRR 1001
>gi|212526670|ref|XP_002143492.1| tRNA-splicing endonuclease, putative [Talaromyces marneffei ATCC
18224]
gi|210072890|gb|EEA26977.1| tRNA-splicing endonuclease, putative [Talaromyces marneffei ATCC
18224]
Length = 2105
Score = 298 bits (764), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 241/801 (30%), Positives = 374/801 (46%), Gaps = 87/801 (10%)
Query: 19 KIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKA 78
+ +L WD+F + G+ + T++D +Y TFEPLL E
Sbjct: 1073 RTLLEWDFFA----------NGDLPPNSGRTDYSLITSTFRDPMEYQRTFEPLLVLEAWQ 1122
Query: 79 QIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADEVE--SISPNDLLLLSKEEFKE 136
K+E + +++ + + + A +++ + D++LLSK
Sbjct: 1123 GFQSAKEEANFKPFEVTVATRLSVDSFMEVSTSLKSAADLKDFGLGEADIVLLSK----- 1177
Query: 137 GSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSAVEK 196
S P A HC A + I+ K V+ +N S + S++S
Sbjct: 1178 -SRDPANDKSA--SHCLARI---------SGINRKKGNVEVSYRVNPGSAMVSALSP-GA 1224
Query: 197 RLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIKEN 256
L++++I SL+ + REY AL ++ + I+ A + + P L+ Y +
Sbjct: 1225 TLWAVRITSLTPLEREYGALMALQYYDLCEEIIKAKPSPLLKYNNASLKP-LVDNY---S 1280
Query: 257 HNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLREIKR- 315
N +Q +AI L AF LIQGPPG+GKT+TI+ L+ A+L +T HS R
Sbjct: 1281 VNQAQAKAIKSALDNDAFTLIQGPPGSGKTKTIVALVGALLSSTLGNQHSVSISRPSTHQ 1340
Query: 316 --GPELPMHEKYNHWGRASPWLVGA--NPRDNIMPIDGDDGFFPTTGNELKPEVVNSSRR 371
GP+ P LV A N + + + G G K V+ R
Sbjct: 1341 APGPKAPTTA-------TKKILVCAPSNAAVDELVMRFKAGVKTLNGRSEKLNVLRLGRS 1393
Query: 372 YRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKI-------------VRIGLKAH 418
+ V + LDE+V LN I+ + KI R L
Sbjct: 1394 DAINANVL---DVTLDELVNARLNQTIQKTSEEKNPQKIFEDHKSTDTAFKETRTKLDQF 1450
Query: 419 HSVNSVAIDHLV------EQKRD------DSAADKQKHGATRKD--RDSIRSAILNEAVI 464
+ D L+ ++KR D+ D+ A D R I+ I++ A +
Sbjct: 1451 RAKGQTPPDELLREFELLKKKRTQLSQEIDNTRDRNNEIARNNDLTRRRIQQEIVDGAHV 1510
Query: 465 VCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATV 524
+C+TLS SG + LN F+ VIIDEAAQ++E + L+PL GC + LVGDP QLP TV
Sbjct: 1511 ICATLSGSGHEMFQNLNIDFETVIIDEAAQSIELSALIPLKYGCAKCILVGDPKQLPPTV 1570
Query: 525 ISPVAEHLGYGTSLFKRLQRAGYP--VKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVE 582
+S A Y SLF R+Q + +P V +L QYRMHP + FPS FYD L+DG D+
Sbjct: 1571 LSKEASRFQYEQSLFVRMQ-SNHPNDVHLLDIQYRMHPAISQFPSVTFYDGLLQDGPDMA 1629
Query: 583 DYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKS 642
R WH + P+ FFD+ +S G S INI E++ + L+ +L++ +
Sbjct: 1630 KLRARPWHNSQLLSPYRFFDVQGLHQSASKGH-SLINIAELNVAMQLYERLLADFKSYDF 1688
Query: 643 SSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKK 702
S ++ II+PY+ Q+++ + RF +G V+ T D QGRE +V IFSCVRAS+ K
Sbjct: 1689 SGKIGIITPYKGQLREMRTRFAARYGNSIFSKVEFNTTDAFQGRESEVIIFSCVRASN-K 1747
Query: 703 SIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQ------DCLFRVS 756
IGFL+D RRMNVG+TRAKSS+ V+G + +L + + W L+ + ++ D L +
Sbjct: 1748 GIGFLSDIRRMNVGLTRAKSSLWVLGNSQSLIQGEFWKKLITDSRQRNVYTDGDVLAMLQ 1807
Query: 757 KPYASFFSDENLESMRKNATT 777
+P + + D ++ N ++
Sbjct: 1808 RPQFTGYRDVDMADADANESS 1828
>gi|428178714|gb|EKX47588.1| hypothetical protein GUITHDRAFT_137364 [Guillardia theta CCMP2712]
Length = 1135
Score = 298 bits (763), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 217/683 (31%), Positives = 334/683 (48%), Gaps = 132/683 (19%)
Query: 169 HINKDAVKSQRLLNIHSLITSSVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLI 228
+I+K V + ++ SL T S + + ++ ++ RE+ A+ + + P I
Sbjct: 219 NISKSKVAADDACDVFSL-TCRQSEIRYQWSIQRLRNMGASIREWRAVHEIKNSPLLHEI 277
Query: 229 LSASEKSS-GSQDQSWKIPG----LLHEYIKENHNASQLEAIHEGL---LRKAFVLIQGP 280
L+ ++ +S + D+ KI G ++ +I N SQL AI R L+QGP
Sbjct: 278 LNPNKFTSLPNDDEVAKIMGHLNPVVQTHIASRSNKSQLVAIAAACDPAHRTGVTLLQGP 337
Query: 281 PGTGKTQTILGLLSAILHATPARVHSKGGLREIKRGPELPMHEKYNHWGRASPWLVGANP 340
PGTGKT IL +L+ LH T + + + L+ + R+ +
Sbjct: 338 PGTGKTTVILSILN-FLHLTQYQQYYESVLKVV----------------RSKLSVQAGTA 380
Query: 341 RDNIMPIDGDDGFFPT------------TGNELKPEVVNSSRRYRVRVLVCAPSNSALDE 388
P++ D G + + T ++ P+V+ + R+L+CAPSN+A+D
Sbjct: 381 AKTPEPVNIDSGKYHSGALESILHDIQKTPSDHTPKVLP-----KPRILICAPSNAAVDH 435
Query: 389 IVLRLLNTGIRDENIRSYTPKIVRIGL--KAHHSVNSVAIDHLVEQ-------------- 432
IV R+L+ +RD N YTP ++RIG HH + V +DH V++
Sbjct: 436 IVERVLSERLRDGN-GLYTPDMIRIGSPNACHHKIRVVTLDHQVQEIMSRGGELEDCKHR 494
Query: 433 ------KRDDSAADKQKHGATR----------------------------------KDRD 452
+R A+ + GAT +D D
Sbjct: 495 YRSLLTRRSYLEAECKGVGATNSLEVEMLKVRTQLEEVERDIKRLEVVKKIKSSKEEDTD 554
Query: 453 SIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVF 512
+R+ +L++A ++ +TLS +G S+L + D VIIDEA Q+VE TL+PL G ++
Sbjct: 555 QLRTMLLDDAQVILTTLSSAGLDCFSRLQNKIDTVIIDEACQSVEAGTLIPLLLGARRCI 614
Query: 513 LVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYD 572
LVGDP QLPATVIS + Y SLF+RL +PV +L QYRMHPE+ FPS FY+
Sbjct: 615 LVGDPRQLPATVISQSSSAAIYQRSLFERLMSCNHPVALLNVQYRMHPEITRFPSEYFYE 674
Query: 573 EALEDGSDV------EDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFV 626
L D ++ E Y W FGPF FFD+ + KE + GS S N+ E FV
Sbjct: 675 GRLVDAENLGRRKEGERYQADPW-----FGPFHFFDLIDSKEQRSDGS-SLRNVAEAKFV 728
Query: 627 LLLFHKLISMYPQLKS-SSQLAIISPYRHQVKQFQERFKETFG-------VESQK----- 673
LL +LIS Y Q ++AI++PYR Q + K G VE++
Sbjct: 729 ALLVKELISRYSQRGELKGKIAILTPYRQQRNEITSSLKRLVGPHAVSESVENRSPEVVT 788
Query: 674 ------VVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVV 727
+D+ TVD CQG+E+D+ IFSCVRA + + +GFL D RRMNV +TRA+ S+LV+
Sbjct: 789 ELARGYSIDVMTVDSCQGQERDIVIFSCVRA-NTRGVGFLEDVRRMNVALTRARHSLLVI 847
Query: 728 GCASTLREDKHWNNLVKSAEKQD 750
G +++L+ + W + +A+K++
Sbjct: 848 GNSNSLKASEPWKAFLANAKKRE 870
>gi|68465577|ref|XP_723150.1| potential nuclear RNA processing factor [Candida albicans SC5314]
gi|68465870|ref|XP_723003.1| potential nuclear RNA processing factor [Candida albicans SC5314]
gi|46445015|gb|EAL04286.1| potential nuclear RNA processing factor [Candida albicans SC5314]
gi|46445171|gb|EAL04441.1| potential nuclear RNA processing factor [Candida albicans SC5314]
Length = 2018
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 237/762 (31%), Positives = 371/762 (48%), Gaps = 88/762 (11%)
Query: 52 REVKDTYKDVDDYLATFEPLLFEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGFHLPSV 111
+E+KDTYKDV DY+ EPLL E + K + + ++L L+ DGF
Sbjct: 1102 QEIKDTYKDVKDYVQVTEPLLMLECWQAMQSAKLTVDEKPFEL-LIGSRTSVDGFFDVFA 1160
Query: 112 TYEADEVE--SISPNDLLLLS--KEEFKEGSTFPTTYAFALVEHCQANL----------- 156
+ E ++ I +DL++L+ E + S C A +
Sbjct: 1161 SMEKTVLQDRKIGDSDLVVLALKDESLQHASDIRRYIKADGTMTCLAKVQDTKYTNSDYC 1220
Query: 157 -LRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSAVEKRLFSLKICSLSTIAREYLA 215
+ LR+Y +G ++ L S++T +K+ + TI RE+ +
Sbjct: 1221 DVVLRVYPSGPMMGA----------LTPKSVVTG-----------MKVMQMVTIEREFSS 1259
Query: 216 LRSVGSLPFKDLILSASEKS--SGSQDQSWKIPGLLHEYIKENHNASQLEAIHEGLLRKA 273
L+ + D I+SA+ ++ + K+ + H N SQ AI +
Sbjct: 1260 LKGLQYYDLADSIISATPNKPIEIEEEDAKKMRKIYHV------NDSQARAIMGTFKSEG 1313
Query: 274 FVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLREIKRGPELPMHEKYNHWGRASP 333
F LIQGPPGTGKT+TILG++ L + +I P +P
Sbjct: 1314 FSLIQGPPGTGKTKTILGIVGYSLSQ-----EKNNKVIDISGSGSSPTPSDKAKILICAP 1368
Query: 334 WLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNSSRRYRVRVLVCAPSNSALDEIVLRL 393
+N + + + DG ++G + +VV R R + + + L+E+V +
Sbjct: 1369 ----SNAAVDELVLRLRDGVRNSSGEHMPLKVV---RLGRSDAINSSVRDLTLEELVDKE 1421
Query: 394 LNTG----IRDENIRSYTPKIV--RIGLKAHHSVNSVAID---------HLVEQKRDDSA 438
L T + D NIR K + R L+ + S+ + +KR + A
Sbjct: 1422 LQTKQTEVVIDPNIRLEHTKCINERDELRKRLATESLEEKEITELEEKIRAINKKRSELA 1481
Query: 439 A--DKQKHGATRKDRD------SIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIID 490
D+Q+ A+ +R +I++ IL+EA ++CSTLS S L++ L+ FD VIID
Sbjct: 1482 KKLDEQREKASIANRTKEINRRNIQARILSEAQVLCSTLSGSAHDLVANLSVQFDQVIID 1541
Query: 491 EAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYP-- 548
EA Q +E + ++PL GCK+ +VGDP QLP TV+S A Y SLF R+Q+ +P
Sbjct: 1542 EACQCLELSAIIPLRYGCKKCIMVGDPNQLPPTVLSQAAASYNYEQSLFVRMQK-NHPDS 1600
Query: 549 VKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKE 608
V ML QYRMHP + FPS EFY+ L+DG + + TR WH+ P+ FFDI GK
Sbjct: 1601 VYMLDVQYRMHPMISKFPSSEFYNSKLKDGDGMLELNTRPWHKDPPLTPYRFFDIL-GKH 1659
Query: 609 SQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFG 668
+ + S N DE L L KL+ + PQ K S ++ IISPY+ Q+++ +E F +G
Sbjct: 1660 EKNELTRSLFNTDEAIVALQLTDKLMQLLPQDKFSGKIGIISPYKEQIRKIKEVFVRKYG 1719
Query: 669 VESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVG 728
+D TVDG QG+EK++ I SCVRAS ++GFL+D RRMNV +TRAK+++ ++G
Sbjct: 1720 KPILDEIDFNTVDGFQGQEKEIIIMSCVRASATGNVGFLSDVRRMNVALTRAKTTLWILG 1779
Query: 729 CASTLREDKHWNNLVKSAEKQDCLFRVSKPYASFFSDENLES 770
+L ++ W L+ A +++C +++ Y F + N S
Sbjct: 1780 NKDSLSRNEVWKKLLTDAGERNC---ITQAYPGFLNPSNPNS 1818
>gi|326474384|gb|EGD98393.1| tRNA-splicing endonuclease [Trichophyton tonsurans CBS 112818]
Length = 2188
Score = 297 bits (760), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 251/804 (31%), Positives = 381/804 (47%), Gaps = 89/804 (11%)
Query: 19 KIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKA 78
K +L WD+F + G+ V + + + +Y TFEPLL E
Sbjct: 1104 KTLLSWDFFA----------TTVLPPNCGRTDYTLVSNVFANALEYQKTFEPLLILEAWQ 1153
Query: 79 QIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADEVE--SISPNDLLLLSKEEFKE 136
+++ +E+++++ D F S E +V+ + DL+LLS+
Sbjct: 1154 GFQTAREDATFKEFEIKVANRLS-VDSFVEVSTIMEPQQVKDLGLGEADLVLLSR----- 1207
Query: 137 GSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSAVEK 196
S P T + A HC + I K V+ +N + +S
Sbjct: 1208 -SNKPATDSGA--PHCLGRI---------SGIKKKKGTVEVSYRINPSGQM-ASGIGPGG 1254
Query: 197 RLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIKEN 256
LF +KI SL+ + REY AL ++ + I+ A + S + +L Y +
Sbjct: 1255 GLFGVKITSLTPLEREYGALMALQYYDLSEEIIRA-KPSPILNYGPESLKSILATY---D 1310
Query: 257 HNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLREIKRG 316
N +Q +AI + AF LIQGPPG+GKT+TI+ ++ A+L TP + +I
Sbjct: 1311 LNPAQAKAIKSAVDNDAFTLIQGPPGSGKTKTIVAIVGALL--TPILAERRVSQPKITSD 1368
Query: 317 PELPMHEKYNHWGRASPWLVGA--NPRDNIMPIDGDDGFFPTTGNELKPEVVNSSRRYRV 374
+ N G + LV A N + + + +G G V+ R +
Sbjct: 1369 -----SAQANKSGPSKKLLVCAPSNAAVDELVMRFKEGVKTLNGKTQPISVIRLGRSDAI 1423
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDEN-----IRSY-------TPKIVRIGLKAHHSVN 422
V + LDE+V LN + +N ++SY + K + I +
Sbjct: 1424 NANVL---DVTLDELVNAKLNQSGQTKNGEERDLQSYFNEHKETSAKFIEIRQRIDQCRA 1480
Query: 423 SV-AIDHLVEQKRD-------------DSAADKQKHGATRK---DRDSIRSAILNEAVIV 465
V + + +E++ D D+A DK H A R R I+ I++ A ++
Sbjct: 1481 RVEPVSNELEREFDLLKRKKAQLSQAIDNARDKN-HAAARNAELTRRRIQQEIIDGAHVI 1539
Query: 466 CSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVI 525
CSTLS SG + L+ F+ VIIDEAAQ++E + L+PL GC + LVGDP QLP TV+
Sbjct: 1540 CSTLSGSGHEMFQSLSIEFETVIIDEAAQSIELSALIPLKYGCSKCVLVGDPKQLPPTVL 1599
Query: 526 SPVAEHLGYGTSLFKRLQRAGYP--VKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVED 583
S A Y SLF R+Q A +P V +L TQYRMHPE+ FPS+ FYD L+DG +
Sbjct: 1600 SKEASRFQYEQSLFVRMQ-ANHPNDVHLLDTQYRMHPEISKFPSQAFYDGKLQDGPGMAP 1658
Query: 584 YTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSS 643
+ WH GP+ FFD+ +G S A S INI E+ + L+ +L++ Y +
Sbjct: 1659 LRKKPWHGSELLGPYRFFDV-QGMHSSAAKGHSLINIAELTVAMRLYERLLADYRNYDFA 1717
Query: 644 SQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKS 703
++ II+PY+ Q+++ + RF +G V+ T D QGRE +V IFSCVRASD +
Sbjct: 1718 GKIGIITPYKGQLRELKSRFAAKYGSSIFTTVEFNTTDAFQGRECEVIIFSCVRASD-RG 1776
Query: 704 IGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSA-EKQ-----DCLFRVSK 757
IGFL+D RRMNVG+TRAKSS+ V+G + +L + W L+ A E+Q D L + K
Sbjct: 1777 IGFLSDIRRMNVGLTRAKSSLWVLGNSQSLVRGEFWRALIHDARERQLYTEGDILRILQK 1836
Query: 758 PYASF-FSDENLESMRKNATTDNV 780
P S N+E + A N+
Sbjct: 1837 PQISLDMELNNVEMVDAPAEVGNI 1860
>gi|301123753|ref|XP_002909603.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262100365|gb|EEY58417.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 777
Score = 297 bits (760), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 196/541 (36%), Positives = 281/541 (51%), Gaps = 86/541 (15%)
Query: 251 EYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILH-ATPARVHSKGG 309
+Y+ +++N SQ+ AI L + V+IQGPPGTGKT+TILGLLSA+L A A + G
Sbjct: 251 KYLHKHYNDSQVLAILGCLGEDSRVIIQGPPGTGKTKTILGLLSALLDGAGLATLQKTKG 310
Query: 310 LREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNSS 369
I+ G L N R + + V +S
Sbjct: 311 TTRIRVGASL------------------QNAR----------------ASAVSKTVAETS 336
Query: 370 RRYRVRVLVCAPSNSALDEIVLRLLNTGIRD-ENIRSYTPKIVRIGL-KAHHSVNSVAID 427
+RVLV APSN+A+DE+VLR+L+ G+ D E SY P+IVR+G ++ + SVA
Sbjct: 337 ----IRVLVAAPSNAAVDELVLRVLSEGLYDGEKGESYRPRIVRVGRPESSQQLASVAAA 392
Query: 428 HLVEQKRDDSAADKQ---------------KHGATRKDRDSIRSAILNEAVIVCSTLSFS 472
+ + + ++ KH +T R AI+ A IV TLS +
Sbjct: 393 REASESKKNRKKMRKYAREVEEVLLESLVTKHRSTFPTAKQARQAIIKNAQIVFCTLSGA 452
Query: 473 GSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHL 532
GS + + FD +IIDEAAQAVE +TL+P +V LVGD QLPATVIS +
Sbjct: 453 GSVAMCEFAQDFDALIIDEAAQAVEASTLIPFKFRPHRVVLVGDHRQLPATVISKSLVSM 512
Query: 533 GYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEY 592
GY SL +RL G PV +L QYRMHPE+ FPS FY L ++ ++TT+D+H
Sbjct: 513 GYDRSLQQRLVENGSPVLLLNQQYRMHPEISEFPSAYFYGGRLVQDDNMREWTTQDYHHD 572
Query: 593 RCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPY 652
R F P F D+ +G ++Q GS S N+ EV+ V+ L +L++ +P+++ ++ +I+PY
Sbjct: 573 RAFKPLLFLDV-QGAQTQVNGSTSLRNMSEVEAVIQLVRRLLTKFPRIEWKKRIGVIAPY 631
Query: 653 RHQ-------VKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRAS------ 699
+ Q V + + F G+E + TVDG QGREK++ I+SCVR S
Sbjct: 632 KQQIYEVRGAVGKLEAEFDRHLGIE------VNTVDGFQGREKEIIIYSCVRTSYGGRRK 685
Query: 700 ----------DKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQ 749
D F AD RRMNV ITRAKSS+ +VG + L + + W L++ +
Sbjct: 686 RKKRNRGNEDDDVLDAFWADERRMNVAITRAKSSLWIVGNSKLLNQSRAWRALIQHTKDH 745
Query: 750 D 750
D
Sbjct: 746 D 746
>gi|410075095|ref|XP_003955130.1| hypothetical protein KAFR_0A05600 [Kazachstania africana CBS 2517]
gi|372461712|emb|CCF55995.1| hypothetical protein KAFR_0A05600 [Kazachstania africana CBS 2517]
Length = 2250
Score = 296 bits (758), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 227/783 (28%), Positives = 363/783 (46%), Gaps = 75/783 (9%)
Query: 19 KIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKA 78
+IIL WDY N ++ D +V D + V Y PLL E
Sbjct: 1088 EIILQWDY----------NRQHDYPDDAEIEFYSDVADHFGSVTSYQKVLRPLLLLECWQ 1137
Query: 79 QIIQKKDEEEVQEWKLRLVMECGEADGFHL-PSVTYEADEVESISPNDLLLLSKEEFKEG 137
+ +D E + + + +D + + SV+ + IS DL++L+ + G
Sbjct: 1138 GLCSSRDRTENMPFTMVVGNRTAVSDFYEVYASVSKVKLQACGISEADLIVLAFLPYVRG 1197
Query: 138 STFPTTYAFALVEH-CQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSAVEK 196
+ F E+ C A + ++ Y + + ++ R N +T +
Sbjct: 1198 NAEVNNSDFRKAENTCLAKVKSIK-YTKNNNVDL---TIRVHRSHNFSKFLT-----LRS 1248
Query: 197 RLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIKEN 256
+ ++K+ ++T+ REY L L + DL+ S+ S Q+ + E +K+N
Sbjct: 1249 EIHAVKVMQMTTVEREYQTLEG---LEYYDLV---SQILSAKPSQAPAVSKEEVERVKDN 1302
Query: 257 H--NASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLREIK 314
+ N SQ EAI + + F LIQGPPGTGKT+TILG++ L S IK
Sbjct: 1303 YKLNTSQAEAIVNTVSTEGFSLIQGPPGTGKTKTILGIIGYFLS-----TRSSSPSNAIK 1357
Query: 315 RGPELPMHEKYNHWGRASPWLVG-ANPRDNIMPIDGDDGFFPTTGNELKPEVVNSSRRYR 373
E + + +N + + I +G + G KP +V R
Sbjct: 1358 VAAETTTLNIEQLLKKQKILICAPSNAAVDEICIRLKEGVYDKNGKVFKPNLVRVGRSDA 1417
Query: 374 VRVLVCAPSNSALDEIVLR--------LLNTGIRDENIRSYTPKIVRIGLKAHHSVNSV- 424
V + + + L+EIV + D N + K + K ++ SV
Sbjct: 1418 VNIAI---KDLTLEEIVEKKVAQKNYEFTQNPELDRNFNTMVAKRRALREKLNNENGSVT 1474
Query: 425 ---AIDHLVEQKRDDSAADKQKHGATRKDRDSIR------------------SAILNEAV 463
+ D + + + + +Q + K+RD IR S +L +
Sbjct: 1475 STLSTDDIAKLQLEIRELSRQLN-VLGKERDEIRERNSVNYRNRDLDRRNAQSQVLASSD 1533
Query: 464 IVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPAT 523
I+C+TLS S +L L FD VIIDEA Q E ++++PL G K+ +VGDP QLP T
Sbjct: 1534 IICATLSGSAHDVLISLGVKFDTVIIDEACQCTELSSIIPLRYGGKRCIMVGDPNQLPPT 1593
Query: 524 VISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVED 583
V+S A + Y SLF R+++ P +L QYRMHP + FPS EFY L+DG +++
Sbjct: 1594 VVSGAASNFKYNQSLFVRMEKNTTPY-LLNVQYRMHPAISYFPSSEFYGGLLKDGPNMDA 1652
Query: 584 YTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQ-LKS 642
R WH P+ FF+I G++ Q + + S+ NI+E+ + L L + Q +
Sbjct: 1653 INQRPWHNTPPLTPYKFFNIVSGRQEQNSKTMSYTNIEEIKVAIELIDYLFRNFDQKVNF 1712
Query: 643 SSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASD-K 701
++ IISPYR Q+++ + F FG + +D T+DG QG+EK++ I SCVRA D
Sbjct: 1713 KGKIGIISPYREQMQKMRREFVVYFGASIKNFIDFNTIDGFQGQEKEIIIISCVRADDTS 1772
Query: 702 KSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRVSKPYAS 761
S+GFL D+RRMNV TRAK+S+ ++G +L ++K W NL+ + ++DC+ Y+
Sbjct: 1773 SSVGFLKDFRRMNVAFTRAKTSMWILGHQKSLYKNKLWRNLIDDSSRRDCM---ETAYSG 1829
Query: 762 FFS 764
F S
Sbjct: 1830 FLS 1832
>gi|425777077|gb|EKV15267.1| tRNA-splicing endonuclease, putative [Penicillium digitatum PHI26]
Length = 2154
Score = 296 bits (757), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 240/773 (31%), Positives = 358/773 (46%), Gaps = 104/773 (13%)
Query: 21 ILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKAQI 80
IL WD+F DR L V +T++ DDY TFEPLL E
Sbjct: 1100 ILSWDFFA--------TGDLPPTTDRTDYSL--VSNTFRTPDDYQRTFEPLLILEAWQGF 1149
Query: 81 IQKKDEEEVQEWKLRLVMECG-------EADGFHLPSVTYEADEVESISPNDLLLLSKEE 133
Q KDE + ++++++ LP + S+ DL+L S
Sbjct: 1150 QQAKDEGSFRPFEVKVMTRLAVDSWIEFSTQPLGLPPKDF------SLGEGDLVLFSNSP 1203
Query: 134 FKEGSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSA 193
K S + A V C N +M + V N + ++S
Sbjct: 1204 -KLTSDPSVPHVLARV--CGVNRKNKKMEVTYRVNPGN------------NKFLSSFGPG 1248
Query: 194 VEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYI 253
E + KI SL+ + REY AL ++ + I+ A + + P I
Sbjct: 1249 TEA--WGAKITSLTPVEREYGALMALQYYDLCEEIVLAKPSPLLTYSDTRLQP------I 1300
Query: 254 KENH--NASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILG----LLSAILHATPARVHSK 307
+N+ N +Q AI + AF LIQGPPG+GKT+TI+ LLS +L +V+
Sbjct: 1301 MDNYSINRAQARAIKSAVDNDAFTLIQGPPGSGKTKTIIALVGSLLSDVLGKQLIKVNGA 1360
Query: 308 GGLREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVN 367
R N + +N + + + DG T G + K V+
Sbjct: 1361 PVAR--------------NALSKKLLLCAPSNAAVDELVMRLKDGVRTTNGRQEKVSVLR 1406
Query: 368 SSRRYRVRVLVCAPSNSALDEIVLRLLN--------------------TGIRDENIRSYT 407
R + V + LDE+V LN T + +R
Sbjct: 1407 LGRSDAINTKVL---DVTLDEMVNARLNQDPSKGNGVDLQKLYEEHKTTDTSFKELRGQL 1463
Query: 408 PKIVRIGLKAHHSVNSVAIDHLVEQKRD------DSAADKQKHGATRKD--RDSIRSAIL 459
+ GL + D L+++KR D A D+ A D + I+ I+
Sbjct: 1464 DEARAKGLPPPEELER-EFD-LMKKKRSQLSTSIDKARDQNHTLARNADMHKRRIQEQII 1521
Query: 460 NEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQ 519
NE+ ++C+TLS SG + +N F+ VIIDEAAQ +E + L+PL GC + LVGDP Q
Sbjct: 1522 NESHVICTTLSGSGHEIFQGMNVEFETVIIDEAAQCIELSALIPLKYGCSKCVLVGDPKQ 1581
Query: 520 LPATVISPVAEHLGYGTSLFKRLQRAGYP--VKMLKTQYRMHPEVRSFPSREFYDEALED 577
LP TV+S +A Y SLF R+Q+ +P V +L QYRMHP + FPS FYD L+D
Sbjct: 1582 LPPTVLSKMASKFQYEQSLFVRMQK-NHPQDVHLLDIQYRMHPAISHFPSVTFYDGKLQD 1640
Query: 578 GSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMY 637
G D+ R WH+ P+ FFD+ +G S A S IN E+ + L+ +LI+
Sbjct: 1641 GPDMAKLRQRPWHQSELLSPYRFFDV-QGMHSSAARGHSLINYAELQVAMQLYDRLITDV 1699
Query: 638 PQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVR 697
+ + ++ II+PY+ Q+++ + +F + +G + + VD T D QGRE +V IFSCVR
Sbjct: 1700 KEYDFAGKIGIITPYKGQLRELKNQFTQRYGEDILRKVDFNTTDAFQGRESEVIIFSCVR 1759
Query: 698 ASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQD 750
AS+ K IGFLAD RRMNVG+TRAKSS+ V+G + +L + + WN L+K+A +++
Sbjct: 1760 ASN-KGIGFLADIRRMNVGLTRAKSSLWVLGNSQSLEQGQFWNGLIKNARERN 1811
>gi|268637806|ref|XP_002649136.1| hypothetical protein DDB_G0285243 [Dictyostelium discoideum AX4]
gi|256012898|gb|EEU04084.1| hypothetical protein DDB_G0285243 [Dictyostelium discoideum AX4]
Length = 2069
Score = 296 bits (757), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 245/765 (32%), Positives = 361/765 (47%), Gaps = 106/765 (13%)
Query: 51 LREVKDTYKDVDDYLATFEPLLFEEVKAQIIQKKDEE-EVQEWKL-RLVMECGEAD-GFH 107
L+ V T+ D+ Y+ F+PLL EE +AQ+I+ DE Q+ + + E G D F
Sbjct: 1157 LKPVPGTFDDLKHYIDIFQPLLIEEFRAQVIRNLDEGVNFQDVTVDNFIQENGFIDVDFE 1216
Query: 108 LPSVTYEADEVESISPNDLLL----LSKEEFKEGSTFPTTY-------AFALVEHCQANL 156
LP ND+LL L + + GS Y AF VE
Sbjct: 1217 LPP-----------KENDILLDDFVLVIQPPRNGSPLNEAYRDPNLFSAFGKVER----- 1260
Query: 157 LRLRMYLAGEVIHINKDAVKSQR----LLNIHSLITSSVSAVEK-----RLFSL-KICSL 206
+ R+ G + +++ ++ + SS + V++ ++++ K+ SL
Sbjct: 1261 -KDRIIPKGGKGNFDQNGGGGGGGRGFIIKVRFYKASSSTFVQQICKIGNIWNIQKVTSL 1319
Query: 207 STIAREYLALRSVGSLPFKDLILSASE--KSSGSQDQSWKIPGLLHEYIKENHNASQLEA 264
STI+REY+AL VG +P I+S S+ S ++KIP L + ++ + N SQL A
Sbjct: 1320 STISREYMALHMVGKIPLGTSIISPHLYINSNDSSSSTFKIPDKLFQKLRSSLNESQLSA 1379
Query: 265 IHEGLLR-KAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLREIKRGPELPMHE 323
I L F L+QGPPGTGKT+TIL LLS L I++
Sbjct: 1380 IASTLKNLGGFSLLQGPPGTGKTKTILSLLSVFTTV----------LTNIEKS------- 1422
Query: 324 KYNHWGRASPWLVGANPR----DNIMPIDGDDGFFPTTGNELKPEVVNSSRRYRVRVLVC 379
+ P ++ P D I DG GN+ KP + + + V
Sbjct: 1423 ------HSDPKILVCAPSNAAVDEIALRIKKDGLIDKNGNKFKPVICRIGNQSHIHPSVQ 1476
Query: 380 APSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLVE---QKRDD 436
S +L + N+ I +E+ + ++ I +K I L E Q+ D+
Sbjct: 1477 DISVESLILGEYKDKNSAIANEDQKKENTRLKIIKIKEKQVEIDKQIKDLAERLKQQEDN 1536
Query: 437 S---------------------AADKQK--HGATRKDRDSIRSAILNEAVIVCSTLSFSG 473
A D+++ H + ++ I+ + I+ STLS SG
Sbjct: 1537 KLRNEITKLNYTREKYNNDLKLAKDEERRFHEQYSNTKRNLYINIIGRSQIILSTLSGSG 1596
Query: 474 SALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLG 533
L FD+VI+DEAAQAVE +TL+PL K+ LVGDP QLP T IS VA
Sbjct: 1597 YDYLFTATKNFDLVIVDEAAQAVELSTLIPLRHDVKKCILVGDPQQLPPTTISKVATKFQ 1656
Query: 534 YGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYR 593
Y SLF+RL G +LKTQYRMHP + FPS+ FY LEDG +V +Y +++
Sbjct: 1657 YEISLFQRLMNCGMAPTVLKTQYRMHPMISKFPSKIFYRGELEDGKNVREYKQDYYNDSA 1716
Query: 594 C-FGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPY 652
FGP F+D+ + + S N EV L+ +LIS YP K ++ +I+PY
Sbjct: 1717 SRFGPLVFYDLFDKHGEVRSSFFSLRNPTEVKLAKLIVDQLISNYPNTK-DLEIGVITPY 1775
Query: 653 RHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRR 712
+ Q FK G ++ V+++T+DG QG+EKD IFS VRA SIGFL+D RR
Sbjct: 1776 KSQSVDLFNAFK---GYQN---VEVSTIDGFQGKEKDFVIFSSVRAHSGHSIGFLSDIRR 1829
Query: 713 MNVGITRAKSSILVVGCASTLREDKHWNNLVKSA-EKQDCLFRVS 756
MNVG+TRAK S++++G +S L + W NLV + +C F +S
Sbjct: 1830 MNVGLTRAKYSMVILGNSSLLSNNDDWGNLVNDLRQTNNCYFPIS 1874
>gi|425771573|gb|EKV10011.1| tRNA-splicing endonuclease, putative [Penicillium digitatum Pd1]
Length = 2154
Score = 295 bits (756), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 240/773 (31%), Positives = 358/773 (46%), Gaps = 104/773 (13%)
Query: 21 ILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKAQI 80
IL WD+F DR L V +T++ DDY TFEPLL E
Sbjct: 1100 ILSWDFFA--------TGDLPPTTDRTDYSL--VSNTFRTPDDYQRTFEPLLILEAWQGF 1149
Query: 81 IQKKDEEEVQEWKLRLVMECG-------EADGFHLPSVTYEADEVESISPNDLLLLSKEE 133
Q KDE + ++++++ LP + S+ DL+L S
Sbjct: 1150 QQAKDEGSFRPFEVKVMTRLAVDSWIEFSTQPLGLPPKDF------SLGEGDLVLFSNSP 1203
Query: 134 FKEGSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSA 193
K S + A V C N +M + V N + ++S
Sbjct: 1204 -KLTSDPSVPHVLARV--CGVNRKNKKMEVTYRVNPGN------------NKFLSSFGPG 1248
Query: 194 VEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYI 253
E + KI SL+ + REY AL ++ + I+ A + + P I
Sbjct: 1249 TEA--WGAKITSLTPVEREYGALMALQYYDLCEEIVLAKPSPLLTYSDTRLQP------I 1300
Query: 254 KENH--NASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILG----LLSAILHATPARVHSK 307
+N+ N +Q AI + AF LIQGPPG+GKT+TI+ LLS +L +V+
Sbjct: 1301 MDNYSINRAQARAIKSAVDNDAFTLIQGPPGSGKTKTIIALVGSLLSDVLGKQLIKVNGA 1360
Query: 308 GGLREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVN 367
R N + +N + + + DG T G + K V+
Sbjct: 1361 PVAR--------------NALSKKLLLCAPSNAAVDELVMRLKDGVRTTNGRQEKVSVLR 1406
Query: 368 SSRRYRVRVLVCAPSNSALDEIVLRLLN--------------------TGIRDENIRSYT 407
R + V + LDE+V LN T + +R
Sbjct: 1407 LGRSDAINTKVL---DVTLDEMVNARLNQDPSKGNGVDLQKLYEEHKTTDTSFKELRGQL 1463
Query: 408 PKIVRIGLKAHHSVNSVAIDHLVEQKRD------DSAADKQKHGATRKD--RDSIRSAIL 459
+ GL + D L+++KR D A D+ A D + I+ I+
Sbjct: 1464 DEARAKGLPPPEELER-EFD-LMKKKRSQLSTSIDKARDQNHTLARNADMHKRRIQEQII 1521
Query: 460 NEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQ 519
NE+ ++C+TLS SG + +N F+ VIIDEAAQ +E + L+PL GC + LVGDP Q
Sbjct: 1522 NESHVICTTLSGSGHEIFQGMNVEFETVIIDEAAQCIELSALIPLKYGCSKCVLVGDPKQ 1581
Query: 520 LPATVISPVAEHLGYGTSLFKRLQRAGYP--VKMLKTQYRMHPEVRSFPSREFYDEALED 577
LP TV+S +A Y SLF R+Q+ +P V +L QYRMHP + FPS FYD L+D
Sbjct: 1582 LPPTVLSKMASKFQYEQSLFVRMQK-NHPQDVHLLDIQYRMHPAISHFPSVTFYDGKLQD 1640
Query: 578 GSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMY 637
G D+ R WH+ P+ FFD+ +G S A S IN E+ + L+ +LI+
Sbjct: 1641 GPDMAKLRQRPWHQSELLSPYRFFDV-QGMHSSAARGHSLINYAELQVAMQLYDRLITDV 1699
Query: 638 PQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVR 697
+ + ++ II+PY+ Q+++ + +F + +G + + VD T D QGRE +V IFSCVR
Sbjct: 1700 KEYDFAGKIGIITPYKGQLRELKNQFTQRYGEDILRKVDFNTTDAFQGRESEVIIFSCVR 1759
Query: 698 ASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQD 750
AS+ K IGFLAD RRMNVG+TRAKSS+ V+G + +L + + WN L+K+A +++
Sbjct: 1760 ASN-KGIGFLADIRRMNVGLTRAKSSLWVLGNSQSLEQGQFWNGLIKNARERN 1811
>gi|125548313|gb|EAY94135.1| hypothetical protein OsI_15908 [Oryza sativa Indica Group]
Length = 716
Score = 295 bits (756), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 165/319 (51%), Positives = 212/319 (66%), Gaps = 20/319 (6%)
Query: 16 RFCKIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEE 75
RF KI+L WDY RLV +SK + GL VK+TY V +YLA FEPLLFEE
Sbjct: 29 RFHKIVLSWDYVRLVA--------DSKGGQQQAKGLGRVKNTYASVAEYLAVFEPLLFEE 80
Query: 76 VKAQIIQKKDEEEV---QEWKLRLVMECGEADGFHLPSVTYEADEVESISPNDLLLLSKE 132
VKAQI+Q + +EE Q+W+ +V C E++GFH S+ D E +S NDLLLLSKE
Sbjct: 81 VKAQIVQGRSDEEEEAGQDWQKGIVASCTESEGFHKVSMAVLDDFREMVSENDLLLLSKE 140
Query: 133 EFKEGSTFPTTYAFALVEHCQA-NLLRLRMYLAGEVIHIN-KDAVKSQRLLNIHSLITSS 190
+F+EG T P+ YAFALVE + LR ++AGE+ ++N V RL I S+ +++
Sbjct: 141 KFEEGVT-PSAYAFALVEQRGGRETISLRTFVAGEIKNLNVAKPVSCSRLQRIASIFSTT 199
Query: 191 VSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQ--SWKIPGL 248
E L+ LKICSLSTI RE+ + SV SLPFKDLILSASEK+SG DQ +W +P
Sbjct: 200 ----ESFLWILKICSLSTIMREFSGMHSVASLPFKDLILSASEKNSGGNDQNRAWNVPEP 255
Query: 249 LHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKG 308
L +Y+K N N SQL+A++ GL R++FVLIQGPPGTGKTQTILGLLSA+LH+ PAR+ +KG
Sbjct: 256 LMDYLKTNLNDSQLDAVNAGLSRRSFVLIQGPPGTGKTQTILGLLSAVLHSAPARMQTKG 315
Query: 309 GLREIKRGPELPMHEKYNH 327
G K GPEL + +
Sbjct: 316 GFDVKKHGPELDIEGNFRQ 334
Score = 278 bits (711), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 137/256 (53%), Positives = 183/256 (71%), Gaps = 9/256 (3%)
Query: 565 FPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVD 624
FPS+EFY+ LEDG + R WH Y CFGPF FFD+ +G ESQP+GSGSW+N DEV+
Sbjct: 458 FPSKEFYEGVLEDGEGLS--KKRPWHSYSCFGPFCFFDV-DGTESQPSGSGSWVNEDEVE 514
Query: 625 FVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQ 684
F+ LL+H++ YP+LKSSSQ+A+ISPYRHQVK ++ F+ TFG +S++V+D+ TVDG Q
Sbjct: 515 FITLLYHQMAMRYPELKSSSQVAVISPYRHQVKLLKDHFRSTFGDQSKEVIDVNTVDGFQ 574
Query: 685 GREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVK 744
GREK+V IFSCVR + ++ IGF++D+RRMNV ITRA+S++LVVG ASTL+EDKHWNNLV+
Sbjct: 575 GREKEVVIFSCVRCNKEQKIGFVSDFRRMNVAITRARSAVLVVGSASTLKEDKHWNNLVE 634
Query: 745 SAEKQDCLFRVSKPYASFFSDENLESM---RKNATTDNVQG--ADGHVPHDDETMHYANT 799
SA+++ F+V KP+ +FF D+ L++M R VQ A E M +
Sbjct: 635 SAKERGRYFQVPKPFTAFFVDDKLKTMKVERAPPELRTVQALEAINEAVVGQELMDVDDA 694
Query: 800 GDA-DQGQADDIDNAD 814
GD D+G DD AD
Sbjct: 695 GDQEDEGYDDDPVEAD 710
>gi|407035278|gb|EKE37635.1| tRNA splicing endonuclease, putative [Entamoeba nuttalli P19]
Length = 1159
Score = 295 bits (755), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 241/759 (31%), Positives = 367/759 (48%), Gaps = 126/759 (16%)
Query: 58 YKDVDDYLATFEPLLFEEVKAQIIQKKDEEEVQEWKLRLVMECGE-ADGFHLPSVTYEAD 116
+K + Y+ F+P+LF+E++A IQK E + + + ++ E L S+ + +
Sbjct: 102 FKSAEHYINCFKPILFDEIRA-TIQKSLIENEEPFVVEGIINKIEITRNDVLLSLNVQRE 160
Query: 117 EVESISPNDLLLLSKEEFKEGSTFPTTYAFALV------EHCQANLLRLRMYLAGEVIHI 170
E DL+++S F+ G TFP + F L E + + L LR E
Sbjct: 161 EWGEF---DLIVVSNVLFETG-TFPKNFPFILGVIVKKGEEDKESSLTLRCLKTTE---- 212
Query: 171 NKDAVKSQRLLNIHSLITSSVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILS 230
Q +N +I K+++ KI S+ + AREYL+L +V L +L
Sbjct: 213 -------QNNVNFFKIIGKG-----KKVYMRKITSIISSAREYLSLCTVQHLSLLKTLLK 260
Query: 231 ASEKSSGSQDQSWKIPGLLHEYIKENH--NASQLEAIHEGLLRKAFVLIQGPPGTGKTQT 288
S K + S I G + +KE + N+SQ+E I+ L +K F LIQGPPGTGKT+T
Sbjct: 261 PSLKDTSP---SNGIFGKYLQTMKETNIFNSSQIECINSALSKKGFSLIQGPPGTGKTKT 317
Query: 289 ILGLLSAILHATPARVHSKGGLREIKRGPELPMHEKYNHWGRASPWLVGANPR---DNIM 345
+LG+L AI+ PA + +G ++ + S LV A D I+
Sbjct: 318 LLGILGAIIFGKPASFNKQGTIK-----------------MKHSKILVCAPSNAAVDEIV 360
Query: 346 PIDGDDGFFPTTGNELKPEVVNSSRRYRVRVLVCAPSNSALDEIVLRLL----------N 395
++G G + K ++ R+ A NS ++E+++ L N
Sbjct: 361 LRIQNEGILNGNGKKQKVNII--------RIGNYAGINSKVNEVLIDTLISNELIKRGYN 412
Query: 396 TGIRDENIRSYTPKIVRI--GLKAHHSVNSVAIDHLVEQ-----KRDDSAAD-------- 440
R EN+ S I + L ++A+++ E+ K +D +
Sbjct: 413 EQKRTENVSSKIASIEQKMRALTKEIEDTTIALNNEKEKVVSSTKENDKKINRIHKYTQT 472
Query: 441 ------------------KQKHGATRKD----RDSIRSAILNEAVIVCSTLSFSGSAL-L 477
K + G ++D R I + EA I+C TL+ SGS + L
Sbjct: 473 LKEMNNKRDAFRVTLQQMKSEKGKIQRDFAKIRKEITKQLFEEADILCCTLNTSGSDIFL 532
Query: 478 SKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTS 537
+ + + VIIDEAAQ+VE +TL+PL G ++ L+GDP QLPATVIS A++ GY S
Sbjct: 533 NCIKEKIENVIIDEAAQSVEISTLIPLRFGAERCILIGDPQQLPATVISVAAQNSGYDRS 592
Query: 538 LFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRC--- 594
LF+RL + G V MLK QYRMHP +R FPS +FY L DG RD C
Sbjct: 593 LFERLYKCGVSVDMLKIQYRMHPLIREFPSNQFYSGELIDG--------RDESILPCSID 644
Query: 595 --FGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPY 652
FGP F+D G E + + N EV V+ L LI YP K + I++PY
Sbjct: 645 KGFGPVVFYDACGGLEERVG--QTLANEVEVQIVIGLLEGLIKKYPNCKEWD-IGIVTPY 701
Query: 653 RHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASD-KKSIGFLADYR 711
R Q+ + + + ++ + + T+DG QGRE D+ IFSCVR+S K SIGFL+D R
Sbjct: 702 RQQLLLIKMAIETSLLLKEMSKLCVNTIDGFQGREMDIIIFSCVRSSQIKPSIGFLSDIR 761
Query: 712 RMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQD 750
RMNV +TRAK+++ V+G ++TL +K W ++ +++D
Sbjct: 762 RMNVALTRAKNALWVIGNSNTLCTNKTWKQYIEWLKEKD 800
>gi|210075156|ref|XP_002142993.1| YALI0A19404p [Yarrowia lipolytica]
gi|199424904|emb|CAG84178.4| YALI0A19404p [Yarrowia lipolytica CLIB122]
Length = 1930
Score = 294 bits (753), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 230/754 (30%), Positives = 358/754 (47%), Gaps = 117/754 (15%)
Query: 51 LREVKDTYKDVDDYLATFEPLLFEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGFHLPS 110
L V D +++V++Y T EPLL E I Q +++ ++ + D F
Sbjct: 1053 LTTVPDKFENVEEYTKTMEPLLLLECWQGITQAREQFNSKQLFNITIGTRTSVDEFFDIH 1112
Query: 111 VTYEADEVESISPND--LLLLSKEEFKEGSTFPTTYAFALVEHCQANLLRLRMYLAGEVI 168
+ A+ + + ND L+LL+ E + T ++ +A AGE
Sbjct: 1113 ASISAETMNNFIINDSTLILLTSTE----DSSRETSCLGKIKEVKA---------AGEFF 1159
Query: 169 HINKDAVKSQRLLNIHSLITSSVSAVEKRLF------SLKICSLSTIAREYLALRSVGSL 222
I +I ++ + V + + K+ ++ TI REY +L+++
Sbjct: 1160 DI---------------IIRTNNTGVARDVNPKTSWQGYKVMNMVTIEREYASLKALEWY 1204
Query: 223 PFKDLILSASE----KSSGSQ----DQSWKIPGLLHEYIKENHNASQLEAIHEGLLRKAF 274
KD IL A K S SQ +++K+ N SQ AI+ L F
Sbjct: 1205 DLKDEILQAKASPLPKGSPSQLADIQKTYKV------------NDSQAAAIYGSLNNTGF 1252
Query: 275 VLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLREIKRGPELPMHEKYNHWGRASPW 334
LIQGPPGTGKT+TILG++ + L + + + R
Sbjct: 1253 SLIQGPPGTGKTKTILGIVGSFLSKKASDIGNDN---------------------RRILL 1291
Query: 335 LVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNSSRRYRVRVLVCAPSNSALDEIVLRLL 394
+N + + + DG + ++G + +P+++ R V V L+E V LL
Sbjct: 1292 CAPSNAAVDELVLRLSDGIYSSSGQKSEPKIIRIGRSEAVNSKV---KKYVLEERVDALL 1348
Query: 395 NTGIRDENIRSYTPKIV---------RIGLKAHHSVNSVAIDH----------LV---EQ 432
+D + S TP++ R L A NSV + + +V E+
Sbjct: 1349 KEQEKDSVVNS-TPELRQKMNKLLDERKELSAKLDDNSVKLSNDEVASIQSRLMVINREK 1407
Query: 433 KRDDSAADKQ--KHGATRKDRDS----IRSAILNEAVIVCSTLSFSGSALLSKLNHGFDV 486
+ S D+Q KH A + +++ + +L EA I+CSTLS S +L L F+
Sbjct: 1408 NKIGSEIDQQREKHAANFRRKETEKRNLNIRVLKEAEIICSTLSASSHNMLKSLGVAFET 1467
Query: 487 VIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAG 546
VIIDEA Q +E + L+P+ GC +VGDP QLP TV+S VA Y SLF R+Q A
Sbjct: 1468 VIIDEACQCIELSVLIPMKYGCTNAIMVGDPNQLPPTVLSTVAAKSKYEQSLFVRMQTAN 1527
Query: 547 -YPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHE 605
+ ML TQYRMHP++ FP +FY L+DG+ + + T + WHEY+ P++FFD+
Sbjct: 1528 PSALHMLDTQYRMHPDISVFPREQFYRGILKDGAGMAEKTKKPWHEYKQLAPYAFFDVAG 1587
Query: 606 GKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKE 665
+E+ + S+ N EV L+ + +MY ++ + IISPY+ QV + + F
Sbjct: 1588 NQEA--TRNHSFFNDAEVHLADQLYRLMSNMYGKI----DIGIISPYKQQVLRLKRHFTR 1641
Query: 666 TFGVESQKVVDITTVDGCQGREKDVAIFSCVRAS-DKKSIGFLADYRRMNVGITRAKSSI 724
+G + ++ +VDG QG+EKD+ I SCVRAS D S+GFLAD RRMNV TRA+SS+
Sbjct: 1642 EYGGDILDKIEFNSVDGFQGQEKDIIIMSCVRASPDSDSVGFLADKRRMNVAFTRARSSM 1701
Query: 725 LVVGCASTLREDKHWNNLVKSAEKQDCLFRVSKP 758
++G A TL + W +V A +D L ++P
Sbjct: 1702 WILGNADTLSRNTIWRKVVNDARNRDMLMDGNRP 1735
>gi|237841007|ref|XP_002369801.1| tRNA-splicing endonuclease positive effector protein, putative
[Toxoplasma gondii ME49]
gi|211967465|gb|EEB02661.1| tRNA-splicing endonuclease positive effector protein, putative
[Toxoplasma gondii ME49]
gi|221483688|gb|EEE22000.1| tRNA-splicing endonuclease positive effector, putative [Toxoplasma
gondii GT1]
gi|221504290|gb|EEE29965.1| tRNA-splicing endonuclease positive effector, putative [Toxoplasma
gondii VEG]
Length = 1193
Score = 294 bits (753), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 203/604 (33%), Positives = 295/604 (48%), Gaps = 103/604 (17%)
Query: 241 QSWKIPGLLHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHA- 299
Q I L E + + +NASQL+A+++ L + LIQGPPGTGKT TI+ ++S +L+A
Sbjct: 547 QQLFISSKLRESLHQLYNASQLDALNDCLKIQGVTLIQGPPGTGKTTTIMAVISVVLNAQ 606
Query: 300 ------TPARVHSKGGLREIKRGP------------------------------------ 317
+ RV+ G GP
Sbjct: 607 MESTDGSTVRVNVVGDASGTDEGPPSAAVANPGDGRLVTAAVDETEQEKAKRRETAEVEI 666
Query: 318 --ELPMHEKYNHWGRASPWLVGANPRDNIM----PIDGDDGFFPT--TGNELK-PEVV-- 366
+L + + +G PW+ D ++ ++G D + T N + P+ V
Sbjct: 667 KKKLAGAQPWLSFGEYVPWM------DEVVCMTEDLEGSDAHWSASATANGVSDPQRVFL 720
Query: 367 NSSRRYRV--RVLVCAPSNSALDEIVLRLL-----NTGIRDENIRSYTPKIVRIGLKAHH 419
+ R + RVLVCAPSN+A+DEI+ RL+ GI D + YTP +VR+G H
Sbjct: 721 DKGRNALLPNRVLVCAPSNAAIDEILKRLVAEPSKGGGIFDSQGKRYTPSVVRVGPNVHP 780
Query: 420 SVNSVAIDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSK 479
+ ++++ Q K K +I++ IL E+ IVC+TLS SG ++
Sbjct: 781 DLVHYSLEYKANQLM------KAKGATHFSALAAIKAEILQESRIVCATLSVSGCRDIAA 834
Query: 480 LNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLF 539
FD V+IDEA+Q VE +TL+PL GC+++ LVGDP QLPAT+ S VA Y SLF
Sbjct: 835 ATEAFDTVVIDEASQGVEMSTLIPLRLGCRRLILVGDPRQLPATIFSRVAIQHRYDQSLF 894
Query: 540 KRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR--DWHEYRCFGP 597
+RL+ AG+ V ML QYRMHP + F S FY L+D ++ W+ F P
Sbjct: 895 QRLEAAGHKVNMLSVQYRMHPCISKFASSTFYQNQLQDAENIVGLVRPPIPWYSIPIFKP 954
Query: 598 FSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSS---SQLAIISPYRH 654
FF I+ + + S IN+DE +FV L L ++ L + +LAIISPY
Sbjct: 955 LVFFAINTSHTEE---NTSLINVDEANFVCQLVDLLKRIFVALGRTDWEGKLAIISPYAQ 1011
Query: 655 QVKQFQERFKETFGVESQKV--VDITTVDGCQGREKDVAIFSCVRASD----------KK 702
QV ++R K + K +D+ TVDG QG+EKD+ IFS VRA
Sbjct: 1012 QVSLLRQRIKAQLRITDNKACPIDVNTVDGFQGQEKDLIIFSAVRAQYTNPTTAQTKLNT 1071
Query: 703 SIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRVSKPYASF 762
SIGFLAD RR+NV +TR ++++ +VG L + HW CL++ +K +
Sbjct: 1072 SIGFLADERRINVALTRGRTNLWIVGNGRFLMSNHHWR----------CLWKYTKELGTL 1121
Query: 763 FSDE 766
S E
Sbjct: 1122 ISIE 1125
>gi|358385072|gb|EHK22669.1| hypothetical protein TRIVIDRAFT_191377 [Trichoderma virens Gv29-8]
Length = 2021
Score = 294 bits (753), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 239/784 (30%), Positives = 351/784 (44%), Gaps = 104/784 (13%)
Query: 16 RFCKIILGWDYFRLVKESQERNDK-NSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFE 74
R IL WD F ND N K EV Y D Y TF PLL
Sbjct: 1106 RLHNTILAWDIF------HGGNDPPNGPKAS-------EVATKYVDPRSYQETFFPLLAS 1152
Query: 75 EVKAQIIQKKDEEEVQEWKLRLVMECGEAD----GFHLPSVTYEADEVESISPNDLLLLS 130
E + KDE Q + +++ F +P VT + D + D+LL+S
Sbjct: 1153 EAWRSFVTSKDEITTQSFGMKIASRASVDSYLEVTFTMP-VTPQRDR--GVFEGDILLVS 1209
Query: 131 KEEFKEGSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSS 190
+ E +HC A + R I KD V+ + + S
Sbjct: 1210 EAE--------NPLVDESAKHCLARVHR---------ITYKKDTVEVTYRVASRNNQLSP 1252
Query: 191 VSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSAS---------EKSSGSQDQ 241
+ ++ +KI +++TI REY AL S+ D IL A E+ S D
Sbjct: 1253 MLTPGATVYGVKITNMATIEREYAALESLQYYDLMDEILKAEPSPILRYGEERVSNYMD- 1311
Query: 242 SWKIPGLLHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATP 301
+W + N Q A+ F LIQGPPGTGKT+TI+ ++ ++L +
Sbjct: 1312 NWAL------------NRGQALAVLGAQENDGFTLIQGPPGTGKTKTIVAMVGSLL--SE 1357
Query: 302 ARVHSKGGLREIKRG-PELPMHEKYNHWGRASPWLVGA--NPRDNIMPIDGDDGFFPTTG 358
+ + G P P+ + R LV A N + + + G G
Sbjct: 1358 QLAQAPLAAAGVPLGVPVRPIGAPAGNQARPKKLLVCAPSNAAVDELVLRLKSGIKTVNG 1417
Query: 359 NELKPEVVNSSRRYRVRVLVCAPSNSALDEIV-LRLLNTGIRD----------------- 400
K +N R R + A + LDE+V RL +D
Sbjct: 1418 ---KTRNINVLRLGRSEAINAAVKDVTLDELVKARLEGDTTKDKAKADRDKLHEEAAQLK 1474
Query: 401 ENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQKRDDSAADKQKHGATRKD---------- 450
E + P++ + S+++ E KR KQ KD
Sbjct: 1475 EQLAQLRPRLDESRNQDDRSLHNSLSRQFDELKRKQIQIGKQIDA--NKDSGNSIAREME 1532
Query: 451 --RDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGC 508
R I+ ILN A ++C+TLS SG + L+ F+ VIIDEAAQ VE + L+PL GC
Sbjct: 1533 LRRRQIQQEILNSAHVLCATLSGSGHEMFRNLDVEFETVIIDEAAQCVELSALIPLKYGC 1592
Query: 509 KQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYP--VKMLKTQYRMHPEVRSFP 566
+ LVGDP QLP TV+S A GY SLF R+Q+ +P + +L QYRMHPE+ SFP
Sbjct: 1593 CKCILVGDPKQLPPTVLSQSAARFGYDQSLFVRMQQ-NHPKSIHLLDMQYRMHPEISSFP 1651
Query: 567 SREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFV 626
SREFY+ L+DG D+ WH+ F P+ FFD+ EG + + S +N E++
Sbjct: 1652 SREFYESQLQDGQDMLQLRQAPWHKDTLFAPYRFFDV-EGVQEKGRKGQSLVNTRELEVA 1710
Query: 627 LLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGR 686
L ++ + Y + + ++ II+PY+ Q+ + + RF+ +G +++ T D QGR
Sbjct: 1711 LQMYERFSRDYHECDLTRKIGIITPYKAQLYELRSRFQARYGENITNIIEFNTTDAFQGR 1770
Query: 687 EKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSA 746
E ++ IFSCVRAS IGF+ D RRMNVG+TRAKSS+ ++G + L + + W L+ A
Sbjct: 1771 ECEIIIFSCVRASATGGIGFMTDIRRMNVGLTRAKSSLWILGDSRALVQGEFWRKLIVDA 1830
Query: 747 EKQD 750
+ +D
Sbjct: 1831 QDRD 1834
>gi|389646651|ref|XP_003720957.1| DNA-binding protein SMUBP-2 [Magnaporthe oryzae 70-15]
gi|351638349|gb|EHA46214.1| DNA-binding protein SMUBP-2 [Magnaporthe oryzae 70-15]
gi|440472216|gb|ELQ41092.1| DNA-binding protein SMUBP-2 [Magnaporthe oryzae Y34]
gi|440482178|gb|ELQ62693.1| DNA-binding protein SMUBP-2 [Magnaporthe oryzae P131]
Length = 2037
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 231/827 (27%), Positives = 361/827 (43%), Gaps = 190/827 (22%)
Query: 16 RFCKIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEE 75
R + IL WD F + + N K +EV +Y + DY TF P+L E
Sbjct: 1113 RLHEAILEWDIFH-----EGSDPPNGYKC-------KEVAKSYTNPVDYRETFFPMLVNE 1160
Query: 76 VKAQIIQKKDEEEVQEWKLRLVMECGEADGF-----HLPSVTYEADEVESISPNDLLLLS 130
+ KDE + + +++ D F +P + + + +S D++L S
Sbjct: 1161 AWRSFVTSKDESTAKPFDIKITTRTS-VDKFLEVATSMPISANKDKDRDRLSDGDIVLFS 1219
Query: 131 KEEFKEGSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSS 190
T + HC A + + + + + R + H L +
Sbjct: 1220 --------TAQDPLSSKESPHCLARVFKTGRKRGVLEVTYRITSKGNSRFASDHLLPGND 1271
Query: 191 VSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKS----SGSQDQSWKIP 246
L L+I +++T+ RE+ AL S+ +L A S + QS++
Sbjct: 1272 -------LRGLRITNMTTVEREFAALESLQYYDLMTEVLDAEPSPILNFSNDRIQSYQ-- 1322
Query: 247 GLLHEYIKENH--NASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAIL-----HA 299
+N+ N Q AI F L+QGPPGTGKT+TI+ ++ A+L A
Sbjct: 1323 --------DNYQLNRGQAAAIINAKENDGFTLVQGPPGTGKTKTIIAMVGALLTGKISRA 1374
Query: 300 TPARVHSKGGLREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGN 359
P R+ G E PM +K
Sbjct: 1375 PPTRIKPANGADE-------PMAQK----------------------------------- 1392
Query: 360 ELKPEVVNSSRRYRVRVLVCAPSNSALDEIVLRL------------------------LN 395
+LVCAPSN+A+DE+VLRL +N
Sbjct: 1393 ----------------LLVCAPSNAAVDELVLRLKAGIKDTNGNTHKINVLRLGRSDAIN 1436
Query: 396 TGIRDENIRSYTPKIVRIGLKAHHSVNS-------------------VAIDHLVEQKRD- 435
+RD + + + L + S NS A+ +EQ R
Sbjct: 1437 AAVRDVTLDELVKEKMDAALNVNGSGNSGPTDREKLHQEAGEIKVRVAALREALEQARAA 1496
Query: 436 -------------DSAADKQKHGATRKDRD----------------SIRSAILNEAVIVC 466
D KQ + DRD +I+ +IL+EA ++C
Sbjct: 1497 GDHGQTNSLQRNLDELRKKQGQIGAQIDRDKASGNTYAREAEIKRRNIQQSILSEAHVLC 1556
Query: 467 STLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVIS 526
+TLS +G + L F+ VIIDEAAQ VE + L+PL G + LVGDP QLP TV+S
Sbjct: 1557 ATLSGAGHDMFKSLQVEFETVIIDEAAQCVELSALIPLKYGASKCILVGDPKQLPPTVLS 1616
Query: 527 PVAEHLGYGTSLFKRLQRAGYP--VKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDY 584
A GY SLF R+Q+ +P V +L QYRMHPE+ +PS+EFY+ L DGSD+
Sbjct: 1617 QSAARYGYDQSLFVRMQQ-NHPGKVHLLDCQYRMHPEISLYPSKEFYEGLLADGSDMAKL 1675
Query: 585 TTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQ-LKSS 643
+ WH+ GP+ FFD+ EG + + + S +N +E++ + ++ K + Y +
Sbjct: 1676 RQQPWHDNPLLGPYRFFDV-EGIQERGSRGQSLVNTNEINVAIQIYTKFQADYASSIDMK 1734
Query: 644 SQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKS 703
++ II+PY+ Q+ +++F+E +G + ++ T D QGRE ++ IFSCVRAS
Sbjct: 1735 GKIGIITPYKAQLFALRQKFQERWGEGVLEDIEFNTTDAFQGRECEIIIFSCVRASPTGG 1794
Query: 704 IGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQD 750
IGF+ D RRMNVG+TRA+SS+ ++G + LR+ + WN L++ ++ +D
Sbjct: 1795 IGFMTDIRRMNVGLTRARSSLWILGDSRALRQGEFWNKLIEDSKARD 1841
>gi|350297309|gb|EGZ78286.1| hypothetical protein NEUTE2DRAFT_102083 [Neurospora tetrasperma FGSC
2509]
Length = 2078
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 233/769 (30%), Positives = 358/769 (46%), Gaps = 90/769 (11%)
Query: 21 ILGWDYFRLVKESQERNDK-NSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKAQ 79
IL WD F E ND N + D V DTY+D Y TF PLL E
Sbjct: 1110 ILEWDIF------HEGNDPPNGYRCD-------HVSDTYQDPVSYKQTFFPLLINEAWRS 1156
Query: 80 IIQKKDEEEVQEWKLRLVMECGEADGFH--LPSVTYEADEVESISPNDLLLLSKEE--FK 135
+ KDE + + ++ V+ D F SV ++ +S D++++SK + +
Sbjct: 1157 FVTAKDETTSKPFGIK-VLSRMTVDKFMEVTASVPVAINKDRQLSEGDIVIISKGQNPLQ 1215
Query: 136 EGSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSAVE 195
E HC + + + Y V + + K ++L +L+ S V
Sbjct: 1216 EPEEL----------HCLSRIWKT-TYKKDNVEVVYRLNAKGNQIL--PALLPGSEFTV- 1261
Query: 196 KRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIKE 255
+KI +++TI REY AL S+ D +L A S + I + +
Sbjct: 1262 -----VKITNMTTIEREYAALESLQYYDLMDEVLRAEPSPMLSFGEE-NIKNTMKNW--- 1312
Query: 256 NHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLREIKR 315
N N Q +AI F LIQGPPGTGKT+TI+ ++ +L G L+
Sbjct: 1313 NLNPGQAKAILNAKENDGFTLIQGPPGTGKTKTIVAMVGCLL---------TGVLKNPSA 1363
Query: 316 GPEL--PMHEKYNHWGRASPWLVGA--NPRDNIMPIDGDDGFFPTTGNELKPEVVNSSRR 371
G + P + A LV A N + + + +G G + EVV R
Sbjct: 1364 GVAIGRPGLGAAKNNAPAKKLLVCAPSNAAVDELVLRLKNGVKTQNGTTHQIEVV---RL 1420
Query: 372 YRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKI-------------VRIGLKAH 418
R + A + LDE+V L + + + K+ +R L+A
Sbjct: 1421 GRSDAINSAVKDVTLDELVKAKLEAQLNKDEGPTDREKLHQEAGEIKQKIAELRPQLEAA 1480
Query: 419 HSVNSVAIDHLVEQKRDDSAADKQKHGATRKDRD----------------SIRSAILNEA 462
+++ + + Q+ D +Q H R D D ++ IL++A
Sbjct: 1481 RTIDDRQLVNKY-QREFDELKRRQAHIGARIDADKASGNTFARETEIKRRQVQQEILDKA 1539
Query: 463 VIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPA 522
++C+TLS SG + LN F+ VIIDEAAQ VE + L+PL GC + LVGDP QLP
Sbjct: 1540 QVLCATLSGSGHEMFKNLNVEFETVIIDEAAQCVELSALIPLKYGCSKCILVGDPKQLPP 1599
Query: 523 TVISPVAEHLGYGTSLFKRLQRAGYP-VKMLKTQYRMHPEVRSFPSREFYDEALEDGSDV 581
TV+S A GY SLF R+Q+ V +L TQYRMHPE+ SFP FY+ L+DG D+
Sbjct: 1600 TVLSQSAARYGYDQSLFVRMQKNHEKDVHLLDTQYRMHPEISSFPRAAFYEGLLQDGDDM 1659
Query: 582 EDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLK 641
+ WH GP+ FFD+ +E P S +N +E+ + L+ + + Y +
Sbjct: 1660 AKSRLQPWHRSTLLGPYRFFDVRGSQERGPKNQ-SLVNEEELKVAMQLYRRFKADYGNVD 1718
Query: 642 SSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDK 701
++ II+PY+ Q+ + + +F + FG ++ T D QGRE ++ IFSCVRAS
Sbjct: 1719 LKGKIGIITPYKAQLYRLRSQFAQRFGDTITDEIEFNTTDAFQGRECEIIIFSCVRASPT 1778
Query: 702 KSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQD 750
IGF+ D RRMNVG+TRA+SS+ ++G + L + + W L++ ++++D
Sbjct: 1779 GGIGFMTDIRRMNVGLTRARSSLWILGDSRALMQGEFWAKLIEDSKRRD 1827
>gi|336463474|gb|EGO51714.1| hypothetical protein NEUTE1DRAFT_70677 [Neurospora tetrasperma FGSC
2508]
Length = 2064
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 233/769 (30%), Positives = 358/769 (46%), Gaps = 90/769 (11%)
Query: 21 ILGWDYFRLVKESQERNDK-NSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKAQ 79
IL WD F E ND N + D V DTY+D Y TF PLL E
Sbjct: 1110 ILEWDIF------HEGNDPPNGYRCD-------HVSDTYQDPVSYKQTFFPLLINEAWRS 1156
Query: 80 IIQKKDEEEVQEWKLRLVMECGEADGFH--LPSVTYEADEVESISPNDLLLLSKEE--FK 135
+ KDE + + ++ V+ D F SV ++ +S D++++SK + +
Sbjct: 1157 FVTAKDETTSKPFGIK-VLSRMTVDKFMEVTASVPVAINKDRQLSEGDIVIISKGQNPLQ 1215
Query: 136 EGSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSAVE 195
E HC + + + Y V + + K ++L +L+ S V
Sbjct: 1216 EPEEL----------HCLSRIWKT-TYKKDNVEVVYRLNAKGNQIL--PALLPGSEFTV- 1261
Query: 196 KRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIKE 255
+KI +++TI REY AL S+ D +L A S + I + +
Sbjct: 1262 -----VKITNMTTIEREYAALESLQYYDLMDEVLRAEPSPMLSFGEE-NIKNTMKNW--- 1312
Query: 256 NHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLREIKR 315
N N Q +AI F LIQGPPGTGKT+TI+ ++ +L G L+
Sbjct: 1313 NLNPGQAKAILNAKENDGFTLIQGPPGTGKTKTIVAMVGCLL---------TGVLKNPSA 1363
Query: 316 GPEL--PMHEKYNHWGRASPWLVGA--NPRDNIMPIDGDDGFFPTTGNELKPEVVNSSRR 371
G + P + A LV A N + + + +G G + EVV R
Sbjct: 1364 GVAIGRPGLGAAKNNAPAKKLLVCAPSNAAVDELVLRLKNGVKTQNGTTHQIEVV---RL 1420
Query: 372 YRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKI-------------VRIGLKAH 418
R + A + LDE+V L + + + K+ +R L+A
Sbjct: 1421 GRSDAINSAVKDVTLDELVKAKLEAQLNKDEGPTDREKLHQEAGEIKQKIAELRPQLEAA 1480
Query: 419 HSVNSVAIDHLVEQKRDDSAADKQKHGATRKDRD----------------SIRSAILNEA 462
+++ + + Q+ D +Q H R D D ++ IL++A
Sbjct: 1481 RTIDDRQLVNKY-QREFDELKRRQAHIGARIDADKASGNTFARETEIKRRQVQQEILDKA 1539
Query: 463 VIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPA 522
++C+TLS SG + LN F+ VIIDEAAQ VE + L+PL GC + LVGDP QLP
Sbjct: 1540 QVLCATLSGSGHEMFKNLNVEFETVIIDEAAQCVELSALIPLKYGCSKCILVGDPKQLPP 1599
Query: 523 TVISPVAEHLGYGTSLFKRLQRAGYP-VKMLKTQYRMHPEVRSFPSREFYDEALEDGSDV 581
TV+S A GY SLF R+Q+ V +L TQYRMHPE+ SFP FY+ L+DG D+
Sbjct: 1600 TVLSQSAARYGYDQSLFVRMQKNHEKDVHLLDTQYRMHPEISSFPRAAFYEGLLQDGDDM 1659
Query: 582 EDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLK 641
+ WH GP+ FFD+ +E P S +N +E+ + L+ + + Y +
Sbjct: 1660 AKSRLQPWHRSTLLGPYRFFDVRGSQERGPKNQ-SLVNEEELKVAMQLYRRFKADYGNVD 1718
Query: 642 SSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDK 701
++ II+PY+ Q+ + + +F + FG ++ T D QGRE ++ IFSCVRAS
Sbjct: 1719 LKGKIGIITPYKAQLYRLRSQFAQRFGDTITDEIEFNTTDAFQGRECEIIIFSCVRASPT 1778
Query: 702 KSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQD 750
IGF+ D RRMNVG+TRA+SS+ ++G + L + + W L++ ++++D
Sbjct: 1779 GGIGFMTDIRRMNVGLTRARSSLWILGDSRALMQGEFWAKLIEDSKRRD 1827
>gi|67484740|ref|XP_657590.1| tRNA splicing endonuclease [Entamoeba histolytica HM-1:IMSS]
gi|56474851|gb|EAL52205.1| tRNA splicing endonuclease, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449709011|gb|EMD48361.1| splicing endonuclease positive effector sen1, putative [Entamoeba
histolytica KU27]
Length = 1140
Score = 293 bits (749), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 241/759 (31%), Positives = 367/759 (48%), Gaps = 126/759 (16%)
Query: 58 YKDVDDYLATFEPLLFEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGFH-LPSVTYEAD 116
+K + Y+ F+P+LF+E++A IQK E + + + V+ E L S+ + +
Sbjct: 102 FKSAEHYINCFKPILFDEIRA-TIQKSLIENEEPFVVEGVINKIEITRNDVLLSLNVQRE 160
Query: 117 EVESISPNDLLLLSKEEFKEGSTFPTTYAFALV------EHCQANLLRLRMYLAGEVIHI 170
E DL+++S F+ G TFP + F L E + + L LR E
Sbjct: 161 EWGEF---DLIVVSNVLFETG-TFPKNFPFILGVIVKKGEEDKESSLTLRCLKTTE---- 212
Query: 171 NKDAVKSQRLLNIHSLITSSVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILS 230
Q +N +I K+++ KI S+ + AREYL+L +V L +L
Sbjct: 213 -------QNNVNFFKIIGKG-----KKVYMRKITSIISSAREYLSLCTVQHLSLLKTLLK 260
Query: 231 ASEKSSGSQDQSWKIPGLLHEYIKENH--NASQLEAIHEGLLRKAFVLIQGPPGTGKTQT 288
S K + S I G + +KE + N+SQ+E I+ L +K F LIQGPPGTGKT+T
Sbjct: 261 PSLKDTSP---SNGIFGKYLQTMKETNIFNSSQIECINSALSKKGFSLIQGPPGTGKTKT 317
Query: 289 ILGLLSAILHATPARVHSKGGLREIKRGPELPMHEKYNHWGRASPWLVGANPR---DNIM 345
+LG+L AI+ P + +G ++ + S LV A D I+
Sbjct: 318 LLGILGAIIFGKPVSFNKQGTIK-----------------MKHSKILVCAPSNAAVDEIV 360
Query: 346 PIDGDDGFFPTTGNELKPEVVNSSRRYRVRVLVCAPSNSALDEIVLRLL----------N 395
++G G + K ++ R+ A NS ++E+++ L N
Sbjct: 361 LRIQNEGILNGNGKKQKVNII--------RIGNYAGINSKVNEVLIDTLISNELIKRGYN 412
Query: 396 TGIRDENIRSYTPKIVRI--GLKAHHSVNSVAIDHLVEQ-----KRDDSAAD-------- 440
R EN+ S I + L ++A+++ E+ K +D +
Sbjct: 413 EQKRTENVSSKIASIEQKMRALTKEIEDTTIALNNEKEKVVSSTKENDKKINRIHKYTQT 472
Query: 441 ------------------KQKHGATRKD----RDSIRSAILNEAVIVCSTLSFSGSAL-L 477
K + G ++D R I + EA I+C TL+ SGS + L
Sbjct: 473 LKEMNNKRDAFRVTLQQMKSEKGKIQRDFAKIRKEITKQLFEEADILCCTLNTSGSDIFL 532
Query: 478 SKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTS 537
+ + + VIIDEAAQ+VE +TL+PL G ++ L+GDP QLPATVIS A++ GY S
Sbjct: 533 NCIKEKIENVIIDEAAQSVEISTLIPLRFGAERCILIGDPQQLPATVISVAAQNSGYDRS 592
Query: 538 LFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRC--- 594
LF+RL + G V MLK QYRMHP +R FPS +FY L DG RD C
Sbjct: 593 LFERLYKCGVFVDMLKIQYRMHPLIREFPSNQFYSGELIDG--------RDESILPCSID 644
Query: 595 --FGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPY 652
FGP F+D G E + + + N EV V+ L LI YP K + I++PY
Sbjct: 645 KGFGPVVFYDACGGLEERVGQTLA--NEVEVQIVIGLLEGLIKKYPNCKEWD-IGIVTPY 701
Query: 653 RHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASD-KKSIGFLADYR 711
R Q+ + + + ++ + + T+DG QGRE D+ IFSCVR+S K SIGFL+D R
Sbjct: 702 RQQLLLIKMAIETSLLLKDMSKLCVNTIDGFQGREMDIIIFSCVRSSQIKPSIGFLSDIR 761
Query: 712 RMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQD 750
RMNV +TRAK+++ V+G ++TL +K W ++ +++D
Sbjct: 762 RMNVALTRAKNALWVIGNSNTLCTNKTWKQYIEWLKEKD 800
>gi|16945408|emb|CAC10094.2| related to SEN1 protein [Neurospora crassa]
Length = 2126
Score = 292 bits (748), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 233/772 (30%), Positives = 357/772 (46%), Gaps = 96/772 (12%)
Query: 21 ILGWDYFRLVKESQERNDK-NSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKAQ 79
IL WD F E ND N + D V DTY+D Y TF PLL E
Sbjct: 1110 ILEWDIF------HEGNDPPNGYRCD-------HVSDTYQDPVSYKQTFFPLLINEAWRS 1156
Query: 80 IIQKKDEEEVQEWKLRLVMECGEADGFH--LPSVTYEADEVESISPNDLLLLSKEE--FK 135
+ KDE + + ++ V+ D F SV ++ +S D++++SK + +
Sbjct: 1157 FVTAKDETTSKPFGIK-VLSRMTVDKFMEVTASVPVAINKDRQLSEGDIVIISKGQNPLQ 1215
Query: 136 EGSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSAVE 195
E HC + + + Y V + + K ++L +L+ S V
Sbjct: 1216 EPEEL----------HCLSRIWKT-TYKKDNVEVVYRLNAKGNQIL--PALLPGSEFTV- 1261
Query: 196 KRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIKE 255
+KI +++TI REY AL S+ D +L A S + I + +
Sbjct: 1262 -----VKITNMTTIEREYAALESLQYYDLMDEVLRAEPSPMLSFGEE-NIKNTMKNW--- 1312
Query: 256 NHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAIL-----HATPARVHSKGGL 310
N N Q +AI F LIQGPPGTGKT+TI+ ++ +L + T + GL
Sbjct: 1313 NLNPGQAKAILNAKENDGFTLIQGPPGTGKTKTIVAMVGCLLTGVLKNPTAGVAIGRPGL 1372
Query: 311 REIKRGPELPMHEKYNHWGRASPWLVGA--NPRDNIMPIDGDDGFFPTTGNELKPEVVNS 368
K A LV A N + + + +G G + EVV
Sbjct: 1373 GAAKNN------------APAKKLLVCAPSNAAVDELVLRLKNGVKTQNGTTHQIEVV-- 1418
Query: 369 SRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKI-------------VRIGL 415
R R + A + LDE+V L + + + K+ +R L
Sbjct: 1419 -RLGRSDAINSAVKDVTLDELVKAKLEAQLNKDEGPTDREKLHQEAGEIKQKIAELRPQL 1477
Query: 416 KAHHSVNSVAIDHLVEQKRDDSAADKQKHGATRKDRD----------------SIRSAIL 459
+A +++ + + Q+ D +Q H R D D ++ IL
Sbjct: 1478 EAARTIDDRQLVNKY-QREFDELKRRQAHIGARIDADKASGNTFARETEIKRRQVQQEIL 1536
Query: 460 NEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQ 519
++A ++C+TLS SG + LN F+ VIIDEAAQ VE + L+PL GC + LVGDP Q
Sbjct: 1537 DKAQVLCATLSGSGHEMFKNLNVEFETVIIDEAAQCVELSALIPLKYGCSKCILVGDPKQ 1596
Query: 520 LPATVISPVAEHLGYGTSLFKRLQRAGYP-VKMLKTQYRMHPEVRSFPSREFYDEALEDG 578
LP TV+S A GY SLF R+Q+ V +L TQYRMHPE+ SFP FY+ L+DG
Sbjct: 1597 LPPTVLSQSAARYGYDQSLFVRMQKNHEKDVHLLDTQYRMHPEISSFPRAAFYEGLLQDG 1656
Query: 579 SDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYP 638
D+ + WH GP+ FFD+ +E P S +N +E+ + L+ + + Y
Sbjct: 1657 DDMAKSRLQPWHRSTLLGPYRFFDVRGSQERGPKNQ-SLVNEEELKVAMQLYRRFKADYG 1715
Query: 639 QLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRA 698
+ ++ II+PY+ Q+ + + +F + FG ++ T D QGRE ++ IFSCVRA
Sbjct: 1716 NVDLKGKIGIITPYKAQLYRLRSQFAQRFGDAITDEIEFNTTDAFQGRECEIIIFSCVRA 1775
Query: 699 SDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQD 750
S IGF+ D RRMNVG+TRA+SS+ ++G + L + + W L++ ++++D
Sbjct: 1776 SPTGGIGFMTDIRRMNVGLTRARSSLWILGDSRALMQGEFWAKLIEDSKRRD 1827
>gi|347832212|emb|CCD47909.1| similar to similar to tRNA-splicing endonuclease [Botryotinia
fuckeliana]
Length = 2019
Score = 292 bits (748), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 236/772 (30%), Positives = 363/772 (47%), Gaps = 90/772 (11%)
Query: 21 ILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKAQI 80
+L WD F E D S V +++ ++ D+ Y TF+PLL EV +
Sbjct: 1116 LLNWDIF------HEGEDPPSNNV------CKKIASSFLDLGLYKETFKPLLISEVWRSL 1163
Query: 81 IQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADEVES--ISPNDLLLLSKEEFKEGS 138
+ K+E + + +++ V+ D F S T + D++LLSK S
Sbjct: 1164 LTAKEENQFKPIEIK-VLNRLSVDKFMEVSTTMSISNQRDLMVYQQDIVLLSK------S 1216
Query: 139 TFPTTYAFALVEHCQANLLRL-RMYLAGEVIH-INKDAVKSQRLLNIHSLITSSVSAVEK 196
+ P A HC A + R R A EV + +++D S LLN
Sbjct: 1217 SNPLQDKQA--PHCLARVFRTTRKRDAVEVTYRVSRDI--SPELLNCF--------VPNG 1264
Query: 197 RLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASE-KSSGSQDQS-WKIPGLLHEYIK 254
+L++LKI ++T RE+ AL SL + DL E K S Q S K+ + + Y
Sbjct: 1265 KLYTLKITDMTTTLREFAAL---SSLEYYDLCTEILEAKPSPLQKYSDEKVASMSNRY-- 1319
Query: 255 ENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLREIK 314
N Q +AI F LIQGPPG+GKT+TI+ ++ A+L + + G R
Sbjct: 1320 -KLNNGQAKAILSANDNDGFTLIQGPPGSGKTKTIIAMVGALLSQVLQQQAQQVGFRPQG 1378
Query: 315 RGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNSSRRYRV 374
+ + + +N + + + +G P +G+ K +N R R
Sbjct: 1379 QNRSAGAQAQAQAPKKKLLICAPSNAAVDELVLRLKEGILPLSGSHQK---INVIRVGRS 1435
Query: 375 RVLVCAPSNSALDEIVLRLL-------------------NTGIRDENIRSYTPKIVRIGL 415
+ + + LDE+V L + G+ E + P++ +
Sbjct: 1436 DAINSSVKDVTLDELVRIKLEGDQESKKGQLNDREVLHRDAGLIKERLSVLRPEMEKCRA 1495
Query: 416 KAHHSVNSVAIDHLVEQKRDDSAADKQKHGATRKDRDS---------------IRSAILN 460
+ L Q+ D KQ H + D D I++
Sbjct: 1496 AGDKT------SELKLQREFDELKRKQAHIGNKIDEDKESDNKVRQNEISRRHFTQEIID 1549
Query: 461 EAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQL 520
A ++C+TLS SG L +N F+ VIIDEAAQ +E + L+PL G + LVGDP QL
Sbjct: 1550 GAHVLCATLSGSGHDFLRNVNVEFETVIIDEAAQCIELSALIPLKYGATKCILVGDPEQL 1609
Query: 521 PATVISPVAEHLGYGTSLFKRLQRAGYP--VKMLKTQYRMHPEVRSFPSREFYDEALEDG 578
P TV+S +A+ GY SLF R+QR +P V +L TQYRMHPE+ FPS++FY+ L DG
Sbjct: 1610 PPTVLSRLAKSYGYEQSLFVRMQR-NHPDDVHLLDTQYRMHPEISRFPSQQFYNSRLIDG 1668
Query: 579 SDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYP 638
+ + WH GP+ FFD+ G +S+ A S IN+ E++ + L+ +L + Y
Sbjct: 1669 DGMAQLRVQPWHASSILGPYRFFDV-VGVQSKEARGHSLINVPELNAAIQLYQRLKTDYR 1727
Query: 639 QLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRA 698
++ II+ Y+ Q+ + + RF FG E + ++ T D QGRE+++ IFSCVRA
Sbjct: 1728 SYDFRGKIGIITTYKAQLNELKRRFGAKFGDEIFEEIEFNTTDAFQGREREIIIFSCVRA 1787
Query: 699 SDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQD 750
IGFL D RRMNVG+TRAKSS+ V+G + L + + WN L++ A+ ++
Sbjct: 1788 KAAGGIGFLNDIRRMNVGLTRAKSSLWVLGDSRALEQGEFWNRLIQDAKSRE 1839
>gi|154291609|ref|XP_001546386.1| hypothetical protein BC1G_15073 [Botryotinia fuckeliana B05.10]
Length = 2019
Score = 292 bits (748), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 236/772 (30%), Positives = 363/772 (47%), Gaps = 90/772 (11%)
Query: 21 ILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKAQI 80
+L WD F E D S V +++ ++ D+ Y TF+PLL EV +
Sbjct: 1116 LLNWDIF------HEGEDPPSNNV------CKKIASSFLDLGLYKETFKPLLISEVWRSL 1163
Query: 81 IQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADEVES--ISPNDLLLLSKEEFKEGS 138
+ K+E + + +++ V+ D F S T + D++LLSK S
Sbjct: 1164 LTAKEENQFKPIEIK-VLNRLSVDKFMEVSTTMSISNQRDLMVYQQDIVLLSK------S 1216
Query: 139 TFPTTYAFALVEHCQANLLRL-RMYLAGEVIH-INKDAVKSQRLLNIHSLITSSVSAVEK 196
+ P A HC A + R R A EV + +++D S LLN
Sbjct: 1217 SNPLQDKQA--PHCLARVFRTTRKRDAVEVTYRVSRDI--SPELLNCF--------VPNG 1264
Query: 197 RLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASE-KSSGSQDQS-WKIPGLLHEYIK 254
+L++LKI ++T RE+ AL SL + DL E K S Q S K+ + + Y
Sbjct: 1265 KLYTLKITDMTTTLREFAAL---SSLEYYDLCTEILEAKPSPLQKYSDEKVASMSNRY-- 1319
Query: 255 ENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLREIK 314
N Q +AI F LIQGPPG+GKT+TI+ ++ A+L + + G R
Sbjct: 1320 -KLNNGQAKAILSANDNDGFTLIQGPPGSGKTKTIIAMVGALLSQVLQQQAQQVGFRPQG 1378
Query: 315 RGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNSSRRYRV 374
+ + + +N + + + +G P +G+ K +N R R
Sbjct: 1379 QNRSAGAQAQAQAPKKKLLICAPSNAAVDELVLRLKEGILPLSGSHQK---INVIRVGRS 1435
Query: 375 RVLVCAPSNSALDEIVLRLL-------------------NTGIRDENIRSYTPKIVRIGL 415
+ + + LDE+V L + G+ E + P++ +
Sbjct: 1436 DAINSSVKDVTLDELVRIKLEGDQESKKGQLNDREVLHRDAGLIKERLSVLRPEMEKCRA 1495
Query: 416 KAHHSVNSVAIDHLVEQKRDDSAADKQKHGATRKDRDS---------------IRSAILN 460
+ L Q+ D KQ H + D D I++
Sbjct: 1496 TGDKT------SELKLQREFDELKRKQAHIGNKIDEDKESDNKVRQNEISRRHFTQEIID 1549
Query: 461 EAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQL 520
A ++C+TLS SG L +N F+ VIIDEAAQ +E + L+PL G + LVGDP QL
Sbjct: 1550 GAHVLCATLSGSGHDFLRNVNVEFETVIIDEAAQCIELSALIPLKYGATKCILVGDPEQL 1609
Query: 521 PATVISPVAEHLGYGTSLFKRLQRAGYP--VKMLKTQYRMHPEVRSFPSREFYDEALEDG 578
P TV+S +A+ GY SLF R+QR +P V +L TQYRMHPE+ FPS++FY+ L DG
Sbjct: 1610 PPTVLSRLAKSYGYEQSLFVRMQR-NHPDDVHLLDTQYRMHPEISRFPSQQFYNSRLIDG 1668
Query: 579 SDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYP 638
+ + WH GP+ FFD+ G +S+ A S IN+ E++ + L+ +L + Y
Sbjct: 1669 DGMAQLRVQPWHASSILGPYRFFDV-VGVQSKEARGHSLINVPELNAAIQLYQRLKTDYR 1727
Query: 639 QLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRA 698
++ II+ Y+ Q+ + + RF FG E + ++ T D QGRE+++ IFSCVRA
Sbjct: 1728 SYDFRGKIGIITTYKAQLNELKRRFGAKFGDEIFEEIEFNTTDAFQGREREIIIFSCVRA 1787
Query: 699 SDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQD 750
IGFL D RRMNVG+TRAKSS+ V+G + L + + WN L++ A+ ++
Sbjct: 1788 KAAGGIGFLNDIRRMNVGLTRAKSSLWVLGDSRALEQGEFWNRLIQDAKSRE 1839
>gi|440800551|gb|ELR21587.1| DNAbinding protein SMUBP-2, putative [Acanthamoeba castellanii str.
Neff]
Length = 799
Score = 292 bits (747), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 153/315 (48%), Positives = 199/315 (63%), Gaps = 10/315 (3%)
Query: 441 KQKHGA-TRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPA 499
++K+G+ K R + ILNE IV +TLS SGS +LS ++HGF+ V+IDEAAQAVE A
Sbjct: 481 RKKYGSRVSKLRKQMELQILNETDIVLTTLSGSGSDILSHMSHGFETVVIDEAAQAVEMA 540
Query: 500 TLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMH 559
TL+PL C++ LVGDP QLPATVIS A Y SLF+RLQ+AG+PV ML QYRMH
Sbjct: 541 TLIPLKYDCRRCILVGDPNQLPATVISQAASSFLYAQSLFQRLQKAGHPVIMLDVQYRMH 600
Query: 560 PEVRSFPSREFYDEALEDGSDVEDYTT----RDWHEYRCFGPFSFFDIHEGKESQPAGSG 615
P +R FPS+ FYD L DG +++ + + +H F PF F+D+ +G E Q A
Sbjct: 601 PLIREFPSKHFYDNRLTDGPNIDTSQSGLYNQPYHADPSFQPFLFYDLCKGVEEQGARGQ 660
Query: 616 SWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVV 675
S++N E F L LF L S +P ++S +I+PY+ Q Q F + +
Sbjct: 661 SYVNPAEATFCLQLFQDLCSRFPHIES----GVITPYKQQYFLLQRTFAAALDKATYSAI 716
Query: 676 DITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLRE 735
DI T+DG QGREKDV IFSCVRA + K IGFL+D RRMNV +TRAK + VVG ++ L
Sbjct: 717 DINTIDGFQGREKDVIIFSCVRAHETKGIGFLSDIRRMNVALTRAKFGLFVVGKSTALLN 776
Query: 736 DKHWNNLVKSA-EKQ 749
+ HW LV A EKQ
Sbjct: 777 NPHWGALVNHAKEKQ 791
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 59/119 (49%), Gaps = 22/119 (18%)
Query: 20 IILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKAQ 79
IILGWDYF L + S +R D LR+V + +DY+ F PLL EE +A
Sbjct: 138 IILGWDYFNL-EASHKRED------------LRQVPIRFSSAEDYIRIFRPLLVEEFRAS 184
Query: 80 IIQKKDEEE---VQEWKLRLVMECGEADGFHLPSVTYEAD---EVESISPNDLLLLSKE 132
+ Q K+E+E VQ+ KL + D FH+ Y+ + ND+LL++ +
Sbjct: 185 LEQDKEEDEFPHVQQVKLS---SLDKVDSFHVVHFKYKVEPDRHARDFFENDILLIADQ 240
Score = 45.8 bits (107), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 19/25 (76%), Positives = 24/25 (96%)
Query: 273 AFVLIQGPPGTGKTQTILGLLSAIL 297
+FVL+QGPPGTGKT+TILG+LS+ L
Sbjct: 292 SFVLLQGPPGTGKTKTILGILSSSL 316
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
Query: 376 VLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQKRD 435
VLVCAPSN+A+DEI +RLL G+ +E+ S P + I L + S + ++++++
Sbjct: 336 VLVCAPSNAAVDEICMRLLEDGLFNES--SVHPMVKAITLASLLDAESDKGNSVLKKEQV 393
Query: 436 DSAADKQKHGATRKDRDSIRSAI 458
+ + K ATRK+ + + I
Sbjct: 394 EFEGFRTKTDATRKELEQVLKKI 416
>gi|443894317|dbj|GAC71665.1| tRNA-splicing endonuclease positive effector [Pseudozyma antarctica
T-34]
Length = 2923
Score = 292 bits (747), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 242/751 (32%), Positives = 357/751 (47%), Gaps = 100/751 (13%)
Query: 52 REVKDTYKDVDDYLATFEPLLFEEVKAQIIQKKDEEEVQEWKLRLVMECGEA--DGFHLP 109
R V+ + + DY + F PLL E AQ Q K+E E + G + D F
Sbjct: 1279 RRVQAQFSNAGDYGSVFGPLLLLECWAQFRQAKEEAEGSNEPTVPLEVAGRSTVDSFIDI 1338
Query: 110 SVTYEADEVE---SISPNDLLLLSKEEFKEGSTFPTTYAFALVE----HCQANLLRLRMY 162
+VT D + + S +++ L KE S A VE H Q + L LR
Sbjct: 1339 NVTIAPDLLPPTVNFSDTEIVRL-KERTPAISGKQPRIVLAKVEAFKRHPQGHQLTLRCC 1397
Query: 163 LAGEVIHINKDAVKSQRLLNIHSLITSSVSAVEKRLFSLKICSLSTIAREYLALRSVGSL 222
L SQ + + + + K+LFSL +T+ RE+ AL +
Sbjct: 1398 L-------------SQDRQGVSTALVNRSKWELKKLFSL-----TTLHREFAALMAA--- 1436
Query: 223 PFKDLILSASEKSSGSQDQSWKIPGLLHEYIKENH-----NASQLEAIHEGLLRKAFVLI 277
P+ DL + + P L E +++ N Q AI L + F LI
Sbjct: 1437 PYFDLFSDVIKARVAPK------PTLSGEEVRKAMQGYQVNEPQARAILGSLATEGFSLI 1490
Query: 278 QGPPGTGKTQTILGLLSAILHATPARVHSKGGLREIKRGPELPMH--EKYNHWGRASPWL 335
QGPPGTGKT+TI L+ G ++GP + + G L
Sbjct: 1491 QGPPGTGKTKTICALI--------------GAFVSNRKGPSTSVQAGQAQGKVGATKKIL 1536
Query: 336 VGANPRDNIMPI--DGDDGFFPTTGNELKPEVVNSSRRYRVRVLVCAPSNSALDEIV-LR 392
+ A I + G G P+VV R + V V + +LD ++ R
Sbjct: 1537 LCAPSNAAIDEVAKRARAGMRLADGKTFHPKVVRVGRDDSMNVSV---KDISLDYLIDQR 1593
Query: 393 LLNTGIRDENIRS------------YTPKIVRIGLKAHHS-----------------VNS 423
L + G D N ++ K+ R +A S + +
Sbjct: 1594 LESGGAFDANRNKAGADPSALHAEIHSLKMQREQKQAELSEARGSGAQTLVTQLEAEIRN 1653
Query: 424 VAIDHLVEQKRDDSAADKQK--HGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLN 481
++ L + D A DKQ+ H DR R IL +A ++C+TLS +G +L+ +
Sbjct: 1654 LSAKRLGVMSKLDEAKDKQQSAHRQREADRRRARMEILGDADVICTTLSGAGHEMLAGVA 1713
Query: 482 HGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKR 541
F+ V+IDEAAQAVE ++++PL GCKQ +VGDP QLP TVIS AE LGY SLF R
Sbjct: 1714 FDFETVVIDEAAQAVELSSMIPLRYGCKQCIMVGDPNQLPPTVISQQAEKLGYSQSLFVR 1773
Query: 542 L-QRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSF 600
+ ++A V +L QYRMHPE+ FPS+ FYD L DG D+ + T + WH+Y PF F
Sbjct: 1774 MFEKAPQAVHLLSIQYRMHPEISVFPSKAFYDSKLLDGPDMAELTRQPWHKYELTRPFKF 1833
Query: 601 FDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQ 660
+ ES P S IN +E + L L+ +L + +P+ ++ I++ Y+ QV + +
Sbjct: 1834 LST-KAPES-PGRFHSIINREEANVALALYERLRTDHPRENFDYRIGIVTMYKAQVFELR 1891
Query: 661 ERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVR-ASDKKSIGFLADYRRMNVGITR 719
F++ +G + + +D TVDG QG+EKD+ I SCVR AS+ +SIGFL+D RR+NV +TR
Sbjct: 1892 RTFQQRYGQDIVERIDFNTVDGFQGQEKDIIILSCVRSASEPRSIGFLSDRRRLNVAVTR 1951
Query: 720 AKSSILVVGCASTLRE-DKHWNNLVKSAEKQ 749
AKS++ V+G A LR D W +LV +AE++
Sbjct: 1952 AKSNLFVIGNAEHLRRGDAIWESLVATAEQR 1982
>gi|402223041|gb|EJU03106.1| hypothetical protein DACRYDRAFT_115362 [Dacryopinax sp. DJM-731 SS1]
Length = 2132
Score = 291 bits (746), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 240/794 (30%), Positives = 368/794 (46%), Gaps = 124/794 (15%)
Query: 17 FCKIILGWDYFRLVKESQERNDKNSKKVDRGKLGLR----EVKDTYKDVDDYLATFEPLL 72
F + +L WDY ++ +V LG+R ++ + DDY TFEP L
Sbjct: 1143 FTRQVLLWDY------------EDQSEVPPYPLGMRPKLSQIPWLFDSYDDYRRTFEPFL 1190
Query: 73 FEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADEVES---ISPNDLLLL 129
E + I++ K E+ VQ L + D + V D V + + D++LL
Sbjct: 1191 MYECWSGIVKSK-EDPVQNIVLCDIGSRSNTDDWLDLDVGINTDNVSNTWFLMDTDVVLL 1249
Query: 130 SKEEFKEGSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITS 189
K+ S +F + RLR L + +N A++ + H
Sbjct: 1250 -KQHLGHKSLMAKVESFR--RTARGVEARLRCCLGNDPRGLNA-ALQIRTQWKAH----- 1300
Query: 190 SVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSA--------SEKSSGSQDQ 241
K+ S +TI REY AL+ + D IL S+ G+ +
Sbjct: 1301 ------------KVFSFTTIYREYAALQGLSLYDMCDDILKPKPARLPKFSDIEVGNAMK 1348
Query: 242 SWKIPGLLHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATP 301
++++ N Q AI + F LIQGPPGTGKT+TI GL+ L
Sbjct: 1349 AFEV------------NEPQANAILGSMQGDGFTLIQGPPGTGKTKTICGLVGCWLS--- 1393
Query: 302 ARVHSKGGLREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDG--DDGFFPTTGN 359
+G R E P K L+ A I + DG + G
Sbjct: 1394 ----KRGSATHPARPSEKPAKSKI---------LICAPSNAAIDEVARRIKDGVRTSNGQ 1440
Query: 360 ELKPEVVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHH 419
VV + V V + +LDE++ R +N D N+++ + +
Sbjct: 1441 RTSANVVRVGADAVINVSV---KDISLDELIERKINA---DVNLKTDRTEAQSDIINLRR 1494
Query: 420 SVNSVAIDHLVEQK-----RDDSAA--------------------------DKQKHGATR 448
+ +V ++ +QK RD+ A DKQK
Sbjct: 1495 DIEAVQVEGRAKQKELSETRDNGARAAALEIEIKALNQKRMGLTSKLNQMRDKQKDAGRT 1554
Query: 449 KD--RDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLAT 506
D R R +L+EA ++C TLS SG LLS ++ F+ V+IDEAAQ+VE ++L+PL
Sbjct: 1555 MDAARRRFRQDVLDEADVICCTLSGSGHELLS--SYDFETVVIDEAAQSVEMSSLIPLKY 1612
Query: 507 GCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKR-LQRAGYPVKMLKTQYRMHPEVRSF 565
CK+ LVGDP QLP TV+S +AE GY SLF R + R V +L QYRMHPE+ +
Sbjct: 1613 QCKRCILVGDPEQLPPTVLSQIAEQQGYSRSLFVRIMHRRPEAVHLLSIQYRMHPEISAL 1672
Query: 566 PSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDF 625
S FYD L+DG + + T + WH F P+ FFD+ +G+E++ S +N E
Sbjct: 1673 DSAMFYDNRLKDGPGMAEKTAQPWHADPLFSPYRFFDV-DGQETKARAGHSLVNDAEASM 1731
Query: 626 VLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQG 685
+L LF ++ + +P + ++ I++ YR Q+ + + F++ +G VD TVDG QG
Sbjct: 1732 ILGLFGRIRAEFPAVNFDYRIGIVTMYREQMFKLRRMFRDYYGEHILTAVDFNTVDGFQG 1791
Query: 686 REKDVAIFSCVRAS-DKKSIGFLADYRRMNVGITRAKSSILVVGCASTL-REDKHWNNLV 743
+EKD+ I SCVRA ++ S+GFLAD RR NV ITRA+S++ + G A+TL R D W ++V
Sbjct: 1792 QEKDIIILSCVRAGPNQSSVGFLADRRRTNVAITRARSNLFIFGNAATLERSDAIWKSIV 1851
Query: 744 KSAEKQDCLFRVSK 757
++A++++ L +V +
Sbjct: 1852 QNAQERNVLMKVDQ 1865
>gi|15224719|ref|NP_179502.1| tRNA-splicing endonuclease positive effector-related protein
[Arabidopsis thaliana]
gi|3176714|gb|AAD12029.1| putative DNA2-NAM7 helicase family protein [Arabidopsis thaliana]
gi|330251755|gb|AEC06849.1| tRNA-splicing endonuclease positive effector-related protein
[Arabidopsis thaliana]
Length = 1090
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 258/826 (31%), Positives = 378/826 (45%), Gaps = 154/826 (18%)
Query: 51 LREVKDTYKDVDDYLATFEPLLFEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGFHLPS 110
LR V + ++ +++Y+ FEPLLFEE +AQ+ W +E EA+
Sbjct: 254 LRSVPERFESMEEYVRVFEPLLFEECRAQLYST--------W-----VELAEAN------ 294
Query: 111 VTYEADEVESISPN-----DLLLLS----KEEFKEG--STFPTTYAFALVEHCQANLLRL 159
TY ++SI D++L S K FKEG + T + +H A
Sbjct: 295 -TYVKVRIKSIERRERGWYDVILNSLNGCKWAFKEGDVAVLSTPLPESDEDHEDAG---- 349
Query: 160 RMYLAGEVI-HINKDAVKSQRLLNIHSLITSSVSAVEKR-----LFSLK---------IC 204
+AG V HI D + R +H + +S K L LK +
Sbjct: 350 --RVAGTVRRHIPVD-TRDPRGATLHFYVGNSGGTGSKIDDSHILRKLKPQDIWHLTVLG 406
Query: 205 SLSTIAREYLALRSVGSL--PFKDLILSAS-EKSSGSQDQSWKIPGLLH----EYIKENH 257
SL+T REY+AL + L ++ IL+ S E+ ++Q+ P +++ +
Sbjct: 407 SLATTQREYVALHAFSRLNPQMQNAILNPSPEQFPSYEEQTPATPDCFTTSFVDHLHRSF 466
Query: 258 NASQLEAIHEGLLRKA--------------FVLIQGPPGTGKTQTILGLLSAILHATPAR 303
NA QL AIH + A F L+QGPPGTGKT T+ G+L+ ++H +
Sbjct: 467 NAPQLAAIHWAAMHTAAGTSSGVKKQEPWPFTLVQGPPGTGKTHTVWGMLN-VIHLVQYQ 525
Query: 304 VHSKGGLREIKRGPELPMHEKYNHWGRASPWLVG---------------------ANPR- 341
+ L+++ PE + + N + L G A PR
Sbjct: 526 QYYTSLLKKL--APE--TYNQANECSSSDNILSGSIDEVLQNMDHNLFRTLPKLCAKPRM 581
Query: 342 ----------DNIMPIDGDDGFFPTTGNELKPEV----VNSSRRYRVRVLVCAPSNSAL- 386
D ++ D GF +P+V V+S R V V S+ L
Sbjct: 582 LVCAPSNAATDELLSRVLDRGFIDGEMRVYRPDVARVGVDSQSRAAQAVSVERRSDQLLA 641
Query: 387 ---DEIVLRLLNTGIRDENIRSYTPKIVR---IGLKAHHSVNSVAIDHLV----EQKRDD 436
DEI+ + N +++ I + R A S SV +D V +QKRD
Sbjct: 642 ISRDEILRHMRNLRLQETQISQNIAGLKRELNAAAFATRSQGSVGVDPEVLISRDQKRDA 701
Query: 437 ---------SAADKQKHGATR-----------------KDRDSIRSAILNEAVIVCSTLS 470
A DK +R + R S+ ++ NEA IV +T+S
Sbjct: 702 LLQHLAAVVEARDKVLVEISRLLIVEGKFRAGNNFNLEEARASLEASFANEAEIVFTTVS 761
Query: 471 FSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAE 530
SG L S+L HGFD+V+IDEAAQA E L PLA G + LVGDP QLPATVIS A
Sbjct: 762 SSGRKLFSRLTHGFDMVVIDEAAQASEVGVLPPLALGAARCVLVGDPQQLPATVISKAAG 821
Query: 531 HLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWH 590
L Y SLF+R Q AG P +L QYRMHP++R FPSR FY L+D + ++
Sbjct: 822 TLLYSRSLFERFQLAGCPTLLLTVQYRMHPQIRDFPSRYFYQGRLKDSESISSAPDEIYY 881
Query: 591 EYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSS-QLAII 649
+ P+ FF+I G+ES GS S+ N+DE F + ++ L L + + +I
Sbjct: 882 KDPVLRPYLFFNISHGRESHRGGSVSYENVDEARFCVGVYMHLQKTLKSLGAGKVSVGVI 941
Query: 650 SPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLAD 709
+PY+ Q+K + F G + K + I TVD QG+E+DV I SCVRAS +GF++D
Sbjct: 942 TPYKLQLKCLKHEFGNALGQDELKEIYINTVDAFQGQERDVIIMSCVRASG-HGVGFVSD 1000
Query: 710 YRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRV 755
RRMNV +TRA+ ++ V+G AS L + + W L+ A ++C +
Sbjct: 1001 IRRMNVALTRARRALWVMGNASALMKSEDWAALISDARGRNCFMEM 1046
>gi|156056478|ref|XP_001594163.1| hypothetical protein SS1G_05593 [Sclerotinia sclerotiorum 1980]
gi|154703375|gb|EDO03114.1| hypothetical protein SS1G_05593 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 2021
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 244/786 (31%), Positives = 369/786 (46%), Gaps = 98/786 (12%)
Query: 21 ILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKAQI 80
+L WD F E D S V R++ +++ D+ Y TF+PLL EV +
Sbjct: 1117 LLNWDIF------HEGEDPPSNNV------CRKIANSFLDLGLYKDTFKPLLISEVWRSL 1164
Query: 81 IQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADEVES--ISPNDLLLLSKEEFKEGS 138
+ K+E + +++ V+ D F S T + D++LLSK S
Sbjct: 1165 LTAKEENNYKPIEIK-VLNRLSVDKFMEVSTTMSISNQRDLMVYQQDIVLLSK------S 1217
Query: 139 TFPTTYAFALVEHCQANLLRL-RMYLAGEVIH-INKDAVKSQRLLNIHSLITSSVSAVEK 196
+ P A HC A + + R A EV + +++D S LLN
Sbjct: 1218 SNPLQDKQA--PHCLARVFKTTRKRDAVEVTYRVSRDI--SPELLNCF--------VPNG 1265
Query: 197 RLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASE-KSSGSQDQS-WKIPGLLHEYIK 254
+L +LKI ++T RE+ AL SL + DL E K S Q S K+ + Y
Sbjct: 1266 KLHTLKITDMTTTLREFAAL---SSLEYYDLCTEIMEAKPSPLQKYSDEKVASISTRY-- 1320
Query: 255 ENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLREIK 314
N Q +AI F LIQGPPG+GKT+TI+ ++ A+L + + G R
Sbjct: 1321 -KLNNGQAKAILSANDNDGFTLIQGPPGSGKTKTIIAMVGALLSQVLQQQAQQVGFR--- 1376
Query: 315 RGPELPMHEKYNHWGRASP----WLVGA--NPRDNIMPIDGDDGFFPTTGNELKPEVVNS 368
P + +A L+ A N + + + +G P TG+ K V+
Sbjct: 1377 -----PQGQNGGAGAQAQAPKKKLLICAPSNAAVDELVLRLKEGILPLTGSHQKINVIRV 1431
Query: 369 SRRYRVRVLVCAPSNSALDEIVLRLL-------------------NTGIRDENIRSYTPK 409
R + V + LDE+V L + G+ E + P+
Sbjct: 1432 GRSDAINSTV---KDVTLDELVRIKLEGDQESKKGQLNDREKLHRDAGLIKERLNVIRPE 1488
Query: 410 IVRIGLKAHHSVNSVAIDHLVEQKRDDSA------ADKQKHGATRKDRDSIR---SAILN 460
+ + + + E KR + DK+ R++ S R I++
Sbjct: 1489 MEKCRAEGDRTSEQKLQREFDELKRKQAHIGNKIDEDKESDNKVRQNEISRRHFTQEIID 1548
Query: 461 EAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQL 520
A ++C+TLS SG L +N F+ VIIDEAAQ +E + L+PL G + LVGDP QL
Sbjct: 1549 GAHVLCATLSGSGHDFLRNVNVEFETVIIDEAAQCIELSALIPLKYGATKCILVGDPEQL 1608
Query: 521 PATVISPVAEHLGYGTSLFKRLQRAGYP--VKMLKTQYRMHPEVRSFPSREFYDEALEDG 578
P TV+S +A+ GY SLF R+QR +P V +L TQYRMHPE+ FPS++FY+ L DG
Sbjct: 1609 PPTVLSRLAKSYGYEQSLFVRMQR-NHPKDVHLLDTQYRMHPEISQFPSQQFYNSRLIDG 1667
Query: 579 SDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYP 638
+ + WH GP+ FFD+ G +S+ S IN+ E++ + L+ +L + Y
Sbjct: 1668 DGMAQLRVQPWHASSILGPYRFFDV-VGVQSKETKGHSLINVPELNAAIQLYQRLKTDYR 1726
Query: 639 QLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRA 698
++ II+ Y+ Q+ + + RF FG E + ++ T D QGRE+++ IFSCVRA
Sbjct: 1727 SYDFRGKIGIITTYKAQLNELKRRFGAKFGDEIFEEIEFNTTDAFQGREREIIIFSCVRA 1786
Query: 699 SDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQ------DCL 752
IGFL D RRMNVG+TRAKSS+ V+G + L + + WN L++ A + D +
Sbjct: 1787 KAAGGIGFLNDIRRMNVGLTRAKSSLWVLGDSRALEQGEFWNRLIQDARSRSRYTSGDIM 1846
Query: 753 FRVSKP 758
+SKP
Sbjct: 1847 GLLSKP 1852
>gi|336264808|ref|XP_003347180.1| hypothetical protein SMAC_05480 [Sordaria macrospora k-hell]
gi|380093874|emb|CCC08839.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 2146
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 232/780 (29%), Positives = 359/780 (46%), Gaps = 113/780 (14%)
Query: 21 ILGWDYFRLVKESQERNDK-NSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKAQ 79
IL WD F E ND N + D V DTY D Y TF PLL E
Sbjct: 1116 ILEWDIF------HEGNDPPNGYRCD-------HVSDTYHDPVSYKQTFFPLLINEAWRS 1162
Query: 80 IIQKKDEEEVQEWKLRLVMECGEADGFH--LPSVTYEADEVESISPNDLLLLSKEE--FK 135
+ KDE + + ++ V+ D F SV + +S D++++SK + +
Sbjct: 1163 FVTSKDETTSKPFGIK-VLSRMTVDKFMEVTASVPAAVSKDRQLSEGDIVIISKGQNPLQ 1221
Query: 136 EGSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSAVE 195
E HC + + + Y V + + K ++L + L+ S V
Sbjct: 1222 EPEEL----------HCLSRIWKT-TYKKDNVEVVYRLNAKGNQILPV--LLPGSEFQV- 1267
Query: 196 KRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEK---SSGSQD-----QSWKIPG 247
+KI +++TI REY AL S+ D +L A S G ++ ++W++
Sbjct: 1268 -----VKITNMTTIEREYAALESLQYYDLMDEVLRAEPSPMLSFGDENIRNTMKNWEL-- 1320
Query: 248 LLHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAIL-----HATPA 302
N Q +AI F LIQGPPGTGKT+TI+ ++ +L + T
Sbjct: 1321 ----------NPGQAKAILNAKENDGFTLIQGPPGTGKTKTIVAMVGCLLTGVLKNPTAG 1370
Query: 303 RVHSKGGLREIKRGPELPMHEKYNHWGRASPWLVGA--NPRDNIMPIDGDDGFFPTTGNE 360
+ GL K P + LV A N + + + +G G
Sbjct: 1371 VAIGRPGLGAAKNAP-------------SKKLLVCAPSNAAVDELVLRLKNGVKTQNGTT 1417
Query: 361 LKPEVVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKI---------- 410
K EVV R + V + LDE+V ++ + + + K+
Sbjct: 1418 HKIEVVRLGRSDAINAGV---RDVTLDELVKAKMDAQLNKDEGPTDREKMHQEAGEIKQK 1474
Query: 411 ---VRIGLKAHHSVNSVAIDHLVEQKRDDSAADKQKHGATRKDRD--------------- 452
+R L+A +++ + + Q+ D +Q H R D D
Sbjct: 1475 IAELRPQLEAARTMDDRQLINKY-QREFDELKRRQAHIGARIDADKASGNTFARETEIKR 1533
Query: 453 -SIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQV 511
++ IL++A ++C+TLS SG + LN F+ VIIDEAAQ VE + L+PL GC +
Sbjct: 1534 RQVQQEILDKAQVLCATLSGSGHEMFKNLNVEFETVIIDEAAQCVELSALIPLKYGCSKC 1593
Query: 512 FLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYP-VKMLKTQYRMHPEVRSFPSREF 570
LVGDP QLP TV+S A GY SLF R+Q++ V +L TQYRMHPE+ SFP F
Sbjct: 1594 ILVGDPKQLPPTVLSQSAARYGYDQSLFVRMQKSHEKDVHLLDTQYRMHPEISSFPREAF 1653
Query: 571 YDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
Y+ L+DG + + WH GP+ FFD+ +E P S +N +E+ + L+
Sbjct: 1654 YEGLLQDGDGMAKSRLQPWHRSALLGPYRFFDVRGLQERGPKNQ-SLVNEEELKVAMQLY 1712
Query: 631 HKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDV 690
+ + Y + ++ II+PY+ Q+ + + +F + FG ++ T D QGRE ++
Sbjct: 1713 RRFKADYGDVDLKGKIGIITPYKAQLHRLRSQFAQRFGDAITDEIEFNTTDAFQGRECEI 1772
Query: 691 AIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQD 750
IFSCVRAS IGF+ D RRMNVG+TRA+SS+ ++G + L + + W L++ ++K+D
Sbjct: 1773 IIFSCVRASPTGGIGFMTDIRRMNVGLTRARSSLWILGDSRALMQGEFWAKLIEDSKKRD 1832
>gi|184160087|gb|ACC68154.1| tRNA-splicing endonuclease positive effector-related protein
[Arabidopsis halleri subsp. halleri]
Length = 1071
Score = 288 bits (738), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 255/831 (30%), Positives = 380/831 (45%), Gaps = 165/831 (19%)
Query: 51 LREVKDTYKDVDDYLATFEPLLFEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGFHLPS 110
LR V + ++ +++Y+ FEPLLFEE +AQ+ W +E EA+
Sbjct: 243 LRSVPERFESMEEYVRVFEPLLFEECRAQLYST--------W-----VELAEAN------ 283
Query: 111 VTYEADEVESISPN-----DLLLLS----KEEFKEG--STFPTTYAFALVEHCQANLL-- 157
TY ++SI D++L+S K FKEG + T + +H A +
Sbjct: 284 -TYVKVRIKSIERRERGWYDVVLVSLNGCKWAFKEGDVAVLSTPLPESDEDHEDAGRVAG 342
Query: 158 RLRMYL---------AGEVIHINKDAVKSQRLLNIHSLITSSVSAVEKRLFSLKIC-SLS 207
++R ++ A ++ ++ + H L K ++ L + S++
Sbjct: 343 KVRRHIPVDTRVPLGATLYFYVGNSGGTGSKIDDNHIL----RKLKPKDIWHLTVLGSIA 398
Query: 208 TIAREYLALRSVGSL--PFKDLILSAS-EKSSGSQDQSWKIPGLLH----EYIKENHNAS 260
T REY+AL + L ++ IL+ S E+ ++Q+ P +++ + NA
Sbjct: 399 TSQREYVALHAFSRLNPQMQNAILNPSPEQFPSYEEQTPATPDCFTTSFVDHLHRSFNAP 458
Query: 261 QLEAIHEGLLRKA--------------FVLIQGPPGTGKTQTILGLLSAILHATPARVHS 306
QL AIH + A F L+QGPPGTGKT T+ G+L+ ++H + +
Sbjct: 459 QLAAIHWAAMHTAAGTSSGVKKQEPWPFTLVQGPPGTGKTHTVWGMLN-VIHLVQYQQYY 517
Query: 307 KGGLREIKRGPELPMHEKYNHWGRAS------------------------PWLVGANPR- 341
L+++ E YN S P L A PR
Sbjct: 518 TSLLKKLA-------PETYNQANECSSDNILSGSIDEVLQNMDQNLFRTLPKLC-AKPRM 569
Query: 342 ----------DNIMPIDGDDGFFPTTGNELKPEV----VNSSRRYRVRVLVCAPSNSAL- 386
D ++ D GF +P+V V+S R V V SN L
Sbjct: 570 LVCAPSNAATDELLSRVLDRGFIDGEMKVYRPDVARVGVDSQTRAAQAVSVERRSNQLLA 629
Query: 387 ---DEIVLRLLNTGIRDENIRSYTPKIVRIGLK--------AHHSVNSVAIDHLV----E 431
DEI + N +++ I +V GLK A S SV +D V +
Sbjct: 630 ISRDEIQRHMHNLRLQETQI-----SLVIAGLKRELNAAAFATRSQGSVGVDPEVLISRD 684
Query: 432 QKRDD---------SAADKQKHGATR-----------------KDRDSIRSAILNEAVIV 465
QKRD A DK +R + R S+ ++ NEA IV
Sbjct: 685 QKRDALLQHLAAVVEARDKVLVEISRLLIVEGKFRAGNNFNLDEARASLEASFANEAEIV 744
Query: 466 CSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVI 525
+T+S SG L S+L HGFD+V+IDEAAQA E L PLA G + LVGDP QLPATVI
Sbjct: 745 FTTVSSSGRKLFSRLTHGFDMVVIDEAAQASEVGVLPPLALGAARCVLVGDPQQLPATVI 804
Query: 526 SPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYT 585
S A L Y SLF+R Q AG P +L QYRMHP++R FPSR FY L+D +
Sbjct: 805 SKAAGTLLYSRSLFERFQLAGCPTLLLTVQYRMHPQIRDFPSRYFYQGRLKDSESISSAP 864
Query: 586 TRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSS- 644
+++ P+ FF+I G+ES GS S+ N+DE F + ++ L L +
Sbjct: 865 DEIYYKDPVLRPYLFFNISHGRESHRGGSVSYENVDEARFCVGVYMHLQKTLKSLGAGKV 924
Query: 645 QLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSI 704
+ +I+PY+ Q+K + F G + K + I TVD QG+E+DV I SCVRAS +
Sbjct: 925 SVGVITPYKLQLKCLKHEFGNALGQDELKEIYINTVDAFQGQERDVIIMSCVRASG-HGV 983
Query: 705 GFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRV 755
GF++D RRMNV +TRA+ ++ V+G AS L + + W L+ A ++C+ +
Sbjct: 984 GFVSDIRRMNVALTRARRALWVMGNASALMKSEDWAALITDARGRNCVMEM 1034
>gi|302656653|ref|XP_003020078.1| hypothetical protein TRV_05851 [Trichophyton verrucosum HKI 0517]
gi|291183859|gb|EFE39454.1| hypothetical protein TRV_05851 [Trichophyton verrucosum HKI 0517]
Length = 2139
Score = 288 bits (737), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 249/809 (30%), Positives = 384/809 (47%), Gaps = 99/809 (12%)
Query: 19 KIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKA 78
K +L WD+F + G+ V + + + +Y TFEPLL E
Sbjct: 1096 KTLLSWDFFA----------TTVLPPNCGRTDYTLVSNVFANALEYQKTFEPLLILEAWQ 1145
Query: 79 QIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADEVE--SISPNDLLLLSKEEFKE 136
+++ +E+++++ D F S E +V+ + DL+LLS+
Sbjct: 1146 GFQTAREDATFKEFEIKVANRLS-VDSFVEVSTIMEPQQVKDLGLGEADLVLLSR----- 1199
Query: 137 GSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSAVEK 196
S P T + A HC + +G I K V+ +N S +S
Sbjct: 1200 -SNKPATDSSA--PHCLGRI-------SG--IKKKKGTVEVSYRIN-PSGPMASGIGPGG 1246
Query: 197 RLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEK---SSGSQDQSWKIPGLLHEYI 253
LF +KI SL+ + REY AL ++ + I+ A + G ++ + +L Y
Sbjct: 1247 GLFGVKITSLTPLEREYGALMALQYYDLSEEIIRAKPSPILNYGPEN----LKTILATY- 1301
Query: 254 KENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLREI 313
+ N +Q +AI + AF LIQGPPG+GKT+TI+ ++ A+L TP
Sbjct: 1302 --DLNPAQAKAIKSAVDNDAFTLIQGPPGSGKTKTIVAIVGALL--TPILAE-------- 1349
Query: 314 KRGPELPMHEKYNHWGRASP---WLVGA--NPRDNIMPIDGDDGFFPTTGNELKPEVVNS 368
++ P+ + +++P LV A N + + + +G G V+
Sbjct: 1350 RKVPQPKIASDSAQASKSAPSKKLLVCAPSNAAVDELVMRFKEGVKTLNGKTQPISVIRL 1409
Query: 369 SRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDEN-----IRSY-------TPKIVRI--- 413
R + V + LDE+V LN + +N ++SY + K + I
Sbjct: 1410 GRSDAINANVL---DVTLDELVNAKLNQSDQKKNGEERDLQSYFNEHKETSAKFIEIRQR 1466
Query: 414 ----GLKAHHSVNSV--AIDHLVEQKRDDSAA---DKQKHGATRKDRDSIRSAILNEAV- 463
+A N + D L +K S A + K+ A ++ + R I E +
Sbjct: 1467 IDQCRTRAEPVSNELEREFDLLKRKKAQLSQAIDNARDKNHAAARNAELTRRRIQQEIID 1526
Query: 464 ---IVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQL 520
++CSTLS SG + L+ F+ VIIDEAAQ++E + L+PL GC + LVGDP QL
Sbjct: 1527 GAHVICSTLSGSGHEMFQSLSIEFETVIIDEAAQSIELSALIPLKYGCSKCVLVGDPKQL 1586
Query: 521 PATVISPVAEHLGYGTSLFKRLQRAGYP--VKMLKTQYRMHPEVRSFPSREFYDEALEDG 578
P TV+S A Y SLF R+Q A +P V +L TQYRMHPE+ FPS+ FYD L+DG
Sbjct: 1587 PPTVLSKEASRFQYEQSLFVRMQ-ANHPNDVHLLDTQYRMHPEISKFPSQAFYDGKLQDG 1645
Query: 579 SDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYP 638
+ + WH GP+ FFD+ +G S A S +NI E+ + L+ +L++ Y
Sbjct: 1646 PGMAPLRKKPWHGSELLGPYRFFDV-QGMHSSAAKGHSLVNIAELTVAMRLYERLVADYR 1704
Query: 639 QLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRA 698
+ ++ II+PY+ Q+++ + RF +G V+ T D QGRE +V IFSCVRA
Sbjct: 1705 NYDFAGKIGIITPYKGQLRELKSRFAAKYGSSIFTAVEFNTTDAFQGRECEVIIFSCVRA 1764
Query: 699 SDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSA-EKQ-----DCL 752
SD + IGFL+D RRMNVG+TRAKSS+ V+G + +L + W L+ A E+Q D L
Sbjct: 1765 SD-RGIGFLSDIRRMNVGLTRAKSSLWVLGNSQSLVRGEFWRALIHDARERQLYTEGDIL 1823
Query: 753 FRVSKPYASF-FSDENLESMRKNATTDNV 780
+ KP S N+E + A N+
Sbjct: 1824 RILQKPQISLDMELNNVEMVDAPAEVGNI 1852
>gi|409042014|gb|EKM51498.1| hypothetical protein PHACADRAFT_199007 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1989
Score = 288 bits (737), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 254/838 (30%), Positives = 376/838 (44%), Gaps = 185/838 (22%)
Query: 19 KIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKA 78
+ +L W+Y D + +L L V D++KD Y FEPLL E A
Sbjct: 1106 RTMLSWNY-----------DHDGSDPPGERLNLVPVPDSFKDEQHYRRVFEPLLLSECWA 1154
Query: 79 QI-IQKKDEEEVQEWKLRLVME--CGEADGFHLP-SVTYEADEVESISPNDLLLLSKEEF 134
QI K D ++ + + +V+ GE D L ++T + +++ DL+LL +
Sbjct: 1155 QIQSSKTDTKKEERYACTIVIRQYSGE-DWIDLDIAITDSVHKEWTLTDADLVLLKHFDG 1213
Query: 135 KEGSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSAV 194
K+ C+ R A + + V SQ + + +S
Sbjct: 1214 KKSVM------------CKVQNYRSTPMNANATLRM----VASQDGPGPQTGSSWMIS-- 1255
Query: 195 EKRLFSLKICSLSTIAREYLALRSVGSLPFKDL---ILSASEKSSGSQDQSWKIPGLLHE 251
KI SL+TI REY S+ +LP+ DL IL A+ S + + +
Sbjct: 1256 -------KITSLTTIHREY---SSLMALPYYDLCPAILDANLLQSARANLD-DVNQTMKA 1304
Query: 252 YIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLR 311
Y N N Q AI L F LIQGPPGTGKT TI GL+ A L
Sbjct: 1305 Y---NLNEPQANAILSALRTAGFSLIQGPPGTGKTSTICGLVQAFL-------------- 1347
Query: 312 EIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNSSRR 371
KRG H GR N P D +
Sbjct: 1348 -AKRG----RTATAIHAGR------------NSGPADKEP-------------------- 1370
Query: 372 YRVRVLVCAPSNSALDEIVLRL----------------LNTG-------IRDENIRSYTP 408
+ ++L+CAPSN+A+DEI RL + TG +RD +
Sbjct: 1371 -KKKILLCAPSNAAIDEITYRLKEGISGPGRQLVIPKVVRTGGGKVGLSVRDVTLDYLVE 1429
Query: 409 KIVRIGLKAHHSVNSV------------AIDHLVEQKR-------DDSAADKQKHGATR- 448
+ + G +A + V A+ H E KR D++A Q R
Sbjct: 1430 QKMNTGGQAKANSQDVGSEIALLRSKLEAVKHNREAKRTELLTVHDNTARTMQLEDTIRA 1489
Query: 449 --KDRDSI-------------------------RSAILNEAVIVCSTLSFSGSALLSKLN 481
K+R ++ R+ IL +A ++C+TL+ SG L
Sbjct: 1490 LNKERTALTSQLDKLRDQQKSNNRTFDAVSRKFRAEILQDADVICTTLAGSGHDTLEP-- 1547
Query: 482 HGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKR 541
+ F++V+IDEAAQAVE ++L+PL C++ +VGDP QLP TV S A Y SLF R
Sbjct: 1548 YEFEMVVIDEAAQAVELSSLIPLKYRCQRCVMVGDPQQLPPTVQSQQATGFSYNQSLFVR 1607
Query: 542 LQRAGYP--VKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFS 599
LQ+ +P V +L QYRMHP++ PSR FY+ L DG D+ T R WH + FGP+
Sbjct: 1608 LQK-HHPEAVHLLSIQYRMHPDISLLPSRLFYNGRLLDGPDMASKTQRPWHRHPKFGPYR 1666
Query: 600 FFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQF 659
F+++H G E+ S S++N E + + L+++L + ++ I++ Y+ Q+ +
Sbjct: 1667 FYNVHRGVET--TASHSYLNQAEAEIAVALYNRLRQEFSAHDFDFKIGIVTMYKAQMLEL 1724
Query: 660 QERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDK-KSIGFLADYRRMNVGIT 718
+ F+ FG +VD TVDG QG+EK++ + SCVRA + +GFL D RRMNV +T
Sbjct: 1725 RRAFERRFGTNIHGLVDFNTVDGFQGQEKEIIVLSCVRAGPGVERVGFLRDVRRMNVALT 1784
Query: 719 RAKSSILVVGCASTL-REDKHWNNLVKSAEKQDCLFRVSKPYASFFSDENLESMRKNA 775
RAKSSI ++G A+TL R D+ W +VK A ++ CL V ++F+ S+ K A
Sbjct: 1785 RAKSSIFILGNAATLERSDEDWRTIVKDARERSCLVDVD---VTYFTSAGSASIIKRA 1839
>gi|366999100|ref|XP_003684286.1| hypothetical protein TPHA_0B01790 [Tetrapisispora phaffii CBS 4417]
gi|357522582|emb|CCE61852.1| hypothetical protein TPHA_0B01790 [Tetrapisispora phaffii CBS 4417]
Length = 2074
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 235/791 (29%), Positives = 374/791 (47%), Gaps = 105/791 (13%)
Query: 17 FCKIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEV 76
F IL WDY N K+ ++ VKD Y V++Y + LL E
Sbjct: 1121 FYNSILKWDY----------NRKDEFPDEKQLNEYSPVKDVYNSVEEYQSIMRSLLLLET 1170
Query: 77 KAQIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADEVES-ISPNDLLLLSK-EEF 134
+ +D EE + + + +D + + + ++ E+ IS +D+++L+ +
Sbjct: 1171 WQGLCSARDREEYTPFPIIVGNRVAVSDFYEIYASVKKSKLTEANISESDMVVLAYLSDV 1230
Query: 135 KEGSTFPTTYAFALVEH-CQANLLRLRMYLAGEVIHINKDAVKSQRLLNIH-SLITSSVS 192
+ G + F +H C A + L+ + D V L IH S +
Sbjct: 1231 QYGEKLKKAH-FQRAQHTCLAKIKTLK--------NAKNDNVDVT--LRIHRSQTFTKYL 1279
Query: 193 AVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLI--LSASEKSSGSQDQSWKIPGLLH 250
+ + ++K+ ++T+ REY +L L + DL+ + A+ +S + +I
Sbjct: 1280 TLRSEIQAMKVMQMTTVEREYTSLEG---LQYYDLVPQILAANPASPPDVSTGEI----- 1331
Query: 251 EYIKENH--NASQLEAIHEGLLRKAFVLIQGPPGTGKTQT---ILGLLSAILHATPARVH 305
E +K N+ N SQ A+ + F LIQGPPGTGKT+T I+G + A P +
Sbjct: 1332 EEVKRNYSLNDSQAMAVVNTVAADGFSLIQGPPGTGKTKTILGIVGHILTTQDALPKNII 1391
Query: 306 SKGGLREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEV 365
G E P L K +P +N + + + +G GN V
Sbjct: 1392 KVPG--EQNSSPALEQTLKRKKVLICAP----SNAAVDEICLRLRNGIATNNGNPFLLSV 1445
Query: 366 VNSSRRYRVRVLVCAPSNSALDEIVLR-LLNTGIRDENI---------RSYTPKIV-RIG 414
V R V N+A+ ++ L L+ + ++N R ++ + R
Sbjct: 1446 VRIGRSDAV--------NAAIKDLTLEELVEKKVSEKNYNMTSNPDLERKFSSCVTKRRA 1497
Query: 415 LKAHHSVNSVAIDHLVE----------------------QKRDDSAADKQKHGATRK-DR 451
+A + AID + ++RD+ + R+ DR
Sbjct: 1498 ARAKLDSENGAIDSTMSTEEITNLQLEIRELSKQINQLGKERDEIREQNSINYRNRELDR 1557
Query: 452 DSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQV 511
+ ++ +L + I+CSTLS S +LS L FD VIIDEA Q E + ++PL G K+
Sbjct: 1558 RNAQARVLANSNIICSTLSGSAHDVLSTLGVKFDTVIIDEACQCTELSAIIPLRYGAKRC 1617
Query: 512 FLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFY 571
+VGDP QLP TV+S A L Y SLF R+++ P +L QYRMHP + +FPS EFY
Sbjct: 1618 IMVGDPNQLPPTVLSSKASSLNYDQSLFVRMEKKCSPY-LLNVQYRMHPSISAFPSLEFY 1676
Query: 572 DEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDE-------VD 624
D L+DG D+ + T R WH GP+ FFDI G+ Q + + S+ N +E VD
Sbjct: 1677 DGKLKDGPDMANITKRPWHSIDSLGPYKFFDIISGRHEQNSRTMSYNNPEEARVAVELVD 1736
Query: 625 FVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQ 684
F+L F + + ++ +ISPY+ QV + + F+ FG+ +K VD T+DG Q
Sbjct: 1737 FLLKRFEN------KYDFTGKIGVISPYKEQVFKLRREFRNHFGLLIEKYVDFNTIDGFQ 1790
Query: 685 GREKDVAIFSCVRASDK---KSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNN 741
G+EK++ I SCVRA+D +GFL D+RRMNV TRAKSS+ ++G +L+ DK WN+
Sbjct: 1791 GQEKEIIILSCVRANDSDHASGVGFLKDFRRMNVAFTRAKSSLWILGHHRSLKRDKLWNH 1850
Query: 742 LVKSAEKQDCL 752
L+ +A++++ L
Sbjct: 1851 LITNAKQRNKL 1861
>gi|429853279|gb|ELA28360.1| helicase sen1 [Colletotrichum gloeosporioides Nara gc5]
Length = 2051
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 240/771 (31%), Positives = 367/771 (47%), Gaps = 84/771 (10%)
Query: 21 ILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKAQI 80
IL WD F E ND S G + V D+Y +Y TF LL E
Sbjct: 1119 ILEWDIF------HEGNDPPSTS---GSIACTRVADSYAHPGEYKQTFLGLLISEAWRSF 1169
Query: 81 IQKKDEEEVQEWKLRLVMECGEADGFH--LPSVTYEADEVESISPNDLLLLSKEEFKEGS 138
+ KDE + + L++ D F S+ ++ +S D++LLS +
Sbjct: 1170 VTSKDETTSKSYGLKIASRMN-VDKFLEVTASIPTTENKERMLSEGDIILLST---GKNP 1225
Query: 139 TFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSAVEKRL 198
T AL + + + R+ + + N + LI + L
Sbjct: 1226 LTDTAEPHALARIWKTSYKKDRLEVTYRLNSKN------------NPLIVAGALNNGSEL 1273
Query: 199 FSLKICSLSTIAREYLALRSVGSLPFKDLILSA--SEKSSGSQDQSWKIPGLLHEYIKEN 256
++KI +++TI REY AL S L + DL++ +E S + + + ++ Y
Sbjct: 1274 QAVKITNMTTIEREYAALES---LQYYDLMVEVLKAEPSPVLEYGNEAVDRVMQNY---Q 1327
Query: 257 HNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLREIKRG 316
N Q +AI F LIQGPPGTGKT+TI+ ++ ++L + +G IK
Sbjct: 1328 LNPGQAKAILGAKDNDGFTLIQGPPGTGKTKTIVAMVGSLLTGN---IQPQGT--AIK-- 1380
Query: 317 PELPMHEKYNHWGRASPWLVGA--NPRDNIMPIDGDDGFFPTTGNELKPEVVNSSRRYRV 374
P++P + N LV A N + + + G TG+ K +N R R
Sbjct: 1381 PKIPAGQA-NQNAMPKKLLVCAPSNAAVDELVLRLKQGVKTMTGSFHK---INVLRLGRS 1436
Query: 375 RVLVCAPSNSALDEIVLRLL---NTG----------------IRDENIRSYTPKIVRIGL 415
+ A + LDE+V + L NTG +RDE + PK+
Sbjct: 1437 DAINAAVRDVTLDELVKQRLEGDNTGNKAREEREKMHKDAAKVRDE-LADLRPKLEEARA 1495
Query: 416 KAHHSVNSV---AIDHLVEQKRDDSAA-DKQK---HGATRK---DRDSIRSAILNEAVIV 465
+V + D L + + A D++K + ATR+ R ++ +L+ A ++
Sbjct: 1496 NGDRNVVQALQRSFDQLKRVQVNIGAKIDEEKASGNTATREAEIRRRQVQQEVLDGAQVL 1555
Query: 466 CSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVI 525
C+TLS SG + LN F+ VIIDEAAQ VE + L+PL G + LVGDP QLP TV+
Sbjct: 1556 CATLSGSGHEMFKNLNVEFETVIIDEAAQCVELSALIPLKYGATKCILVGDPKQLPPTVL 1615
Query: 526 SPVAEHLGYGTSLFKRLQRAGYP--VKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVED 583
S A GY SLF R+QR +P + ML QYRMHPE+ FPS EFY+ L DG D+ D
Sbjct: 1616 SQSAARFGYDQSLFVRMQR-NFPNYIHMLDRQYRMHPEISRFPSLEFYEGKLVDGDDMAD 1674
Query: 584 YTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYP-QLKS 642
+ WH GP+ FFD+ EG + + S +N E+ + L+ + + + Q
Sbjct: 1675 LRRQPWHASALLGPYRFFDV-EGSQEKGNKGRSLVNHAELRVAMQLYERFRADFGRQTDI 1733
Query: 643 SSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKK 702
++ II+PY+ Q+++ + +F +G ++ T D QGRE ++ IFSCVRAS
Sbjct: 1734 RGKIGIITPYKAQLQELRYQFGRQYGDGITDDIEFNTTDAFQGRECEIIIFSCVRASPTG 1793
Query: 703 SIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLF 753
IGF+ D RRMNVG+TRAKSS+ ++G + L + + WN L+++A +Q L+
Sbjct: 1794 GIGFMQDIRRMNVGLTRAKSSLWILGDSRALVQGEFWNKLIENA-RQRALY 1843
>gi|310791058|gb|EFQ26587.1| helicase sen1 [Glomerella graminicola M1.001]
Length = 2076
Score = 286 bits (733), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 238/775 (30%), Positives = 359/775 (46%), Gaps = 93/775 (12%)
Query: 21 ILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKAQI 80
IL WD F E ND S L + V TY +Y TF LL E
Sbjct: 1126 ILEWDIF------HEGNDPPSTS---ASLVITRVASTYAHPQEYKQTFLGLLISEAWRSF 1176
Query: 81 IQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADEVES-ISPNDLLLLSKEEFKEGST 139
+ KDE + + L++ + + A+ E +S D++L+SK G++
Sbjct: 1177 VTAKDETTSKPYGLKIASRMNVDKFLEVTASIPSAENKERMLSEGDIVLVSK-----GNS 1231
Query: 140 FPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRL-----LNI--HSLITSSVS 192
L ++ +A+ L I K K +RL LN + L+ ++
Sbjct: 1232 -------PLTDNSEAHAL----------ARIWKTTYKKERLEVTYRLNSKNNPLLATNAL 1274
Query: 193 AVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSA--SEKSSGSQDQSWKIPGLLH 250
V L ++KI +++TI REY AL S L + DL+L +E S + + G++
Sbjct: 1275 GVGSELQAVKITNMTTIEREYAALES---LQYYDLMLEVLKAEPSPILKYGEEAVNGVMQ 1331
Query: 251 EYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGL 310
Y N Q +AI F LIQGPPGTGKT+TI+ ++ ++L + G
Sbjct: 1332 NY---QLNPGQAKAILGARDNDGFTLIQGPPGTGKTKTIIAMVGSLLTGN---IQPPGT- 1384
Query: 311 REIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNSSR 370
IK P+L N + +N + + + G G+ K +N R
Sbjct: 1385 -AIK--PKLVGQAAQNSMPKKLLVCAPSNTAVDELVLRLKQGVKTMNGSFHK---INVLR 1438
Query: 371 RYRVRVLVCAPSNSALDEIVLRLLN-------------------TGIRDENIRSYTPKIV 411
R + A + LDE+V + L IRDE + PK+
Sbjct: 1439 LGRSDAINAAVRDVTLDELVKQKLQGDTTQSKAKEERDKMHNDAAKIRDE-LAEIRPKLD 1497
Query: 412 RIGLKAHHSVNSVAIDHLVEQKR----------DDSAADKQKHGATRKDRDSIRSAILNE 461
+++ + KR +D A+ R I+ IL+
Sbjct: 1498 EARAAGDRNLSQALQRSFDQLKRAQINIGAKIDEDKASGNTASREAEIRRRQIQQEILDG 1557
Query: 462 AVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLP 521
A ++C+TLS SG + LN F+ VIIDEAAQ VE + L+PL GC + LVGDP QLP
Sbjct: 1558 AQVLCATLSGSGHEMFKNLNVEFETVIIDEAAQCVELSALIPLKYGCTKCILVGDPKQLP 1617
Query: 522 ATVISPVAEHLGYGTSLFKRLQRAGYP--VKMLKTQYRMHPEVRSFPSREFYDEALEDGS 579
TV+S A GY SLF R+Q+ +P V +L QYRMHPE+ FPS EFY+ L DG
Sbjct: 1618 PTVLSQSAARFGYDQSLFVRMQQ-NHPDYVHLLDRQYRMHPEISLFPSMEFYEGKLVDGE 1676
Query: 580 DVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQ 639
D+ + WH GP+ FFD+ EG +S+ + S +N E+ + L+ + + + +
Sbjct: 1677 DMSALRCQPWHATALLGPYRFFDV-EGTQSKGSKGRSLVNHAELKVAMQLYERFKADFGR 1735
Query: 640 -LKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRA 698
++ II+PY+ Q+++ + +F FG ++ T D QGRE ++ IFSCVRA
Sbjct: 1736 NYDIKGKIGIITPYKAQLQELKWQFSRQFGDNITDDIEFNTTDAFQGRECEIIIFSCVRA 1795
Query: 699 SDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLF 753
IGF+ D RRMNVG+TRAKSS+ ++G + L + + WN L+ +A KQ L+
Sbjct: 1796 DPTGGIGFVKDIRRMNVGLTRAKSSLWILGDSRALVQGEFWNKLIDNA-KQRSLY 1849
>gi|392591642|gb|EIW80969.1| hypothetical protein CONPUDRAFT_104043 [Coniophora puteana RWD-64-598
SS2]
Length = 1855
Score = 286 bits (731), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 249/790 (31%), Positives = 370/790 (46%), Gaps = 115/790 (14%)
Query: 19 KIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKA 78
+ IL WDY E E + SK L V D + D YL TFEPLL E A
Sbjct: 1002 RAILAWDYDH---EGPEPPYQGSKP------HLFHVGDKFIDHRQYLKTFEPLLLLEAWA 1052
Query: 79 QIIQKKDEEEVQEWKLRLVMECGEADGFHL-PSVTYEADEVESISPNDLLLLSKEEFKEG 137
QI+Q K+E E + ++ ++ D + S++ + ++ D++LL K+
Sbjct: 1053 QIVQSKEERE-ESYECKITSRHFIDDFVDMEASISEMVQKDWRLTEMDVILLRHPSNKKC 1111
Query: 138 STFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSAVEKR 197
A + + + LR Y+ S L IHS+
Sbjct: 1112 IL---AKAVSYRRTHFGSQVTLRCYIPNG---------SSDPGLQIHSVWQLR------- 1152
Query: 198 LFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIKENH 257
K+ SLST+ REY AL + LP+ DL S+ IP + + +K
Sbjct: 1153 ----KVFSLSTLHREYAALMA---LPYYDLF------STIMNPVIKPIPRMNQDEVKRAM 1199
Query: 258 NA-----SQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLRE 312
N Q +AI L F LIQGPPGTGKT TI GL+ G
Sbjct: 1200 NTYKINEPQAKAILGSLSADGFALIQGPPGTGKTSTICGLVE--------------GFIA 1245
Query: 313 IKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELK-----PEVVN 367
+RGP + GR+S A P ++ + N LK P+V N
Sbjct: 1246 KRRGPATSIQ-----IGRSSTNADKA-PVQKVLICAPSNAAIDEVANRLKDGFRGPQVRN 1299
Query: 368 SSRRYRVRV-----LVCAPSNSALDEIVLRLLNTGIRDENIRSYTPK---IVRIGLKAHH 419
+S + VR+ + + + ALD +V + +N +N + ++R +++
Sbjct: 1300 TSLKV-VRIGTEKAMGLSVKDIALDYLVDQKINDSPGTKNTSKESGNEINVLRAEIESVK 1358
Query: 420 SVNSVAIDHLVE-------------------------QKRDDSAADKQKHGATRKD--RD 452
+ V ++ L ++ D DKQK + D R
Sbjct: 1359 NAKQVKVEELATVHDNTARTMALEEEIKKLNSRRLTLTQQIDRLRDKQKSDSRTLDAIRR 1418
Query: 453 SIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVF 512
R+ IL EA ++CSTLS +G + +L F++VIIDEAAQA+E ++L+PL C +
Sbjct: 1419 RFRAEILQEADVICSTLSGAGHETIEQLE--FEMVIIDEAAQAIELSSLIPLKFPCARCI 1476
Query: 513 LVGDPVQLPATVISPVAEHLGYGTSLFKRLQR-AGYPVKMLKTQYRMHPEVRSFPSREFY 571
LVGDP QLP TV+S A Y SLF RLQ+ V +L QYRMHP++ PSR FY
Sbjct: 1477 LVGDPQQLPPTVLSQDACKYLYNQSLFVRLQKHRPDAVHLLSIQYRMHPDISRLPSRIFY 1536
Query: 572 DEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFH 631
L+DG + + T + WH+ G + FF++ +G+ES+ G S N+ E + LF
Sbjct: 1537 QGRLQDGPGMAEKTRQVWHDNPLLGTYRFFNVSKGQESESNGR-SLKNVLESQVAVALFS 1595
Query: 632 KLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVA 691
+L + Y + ++ ++S YR QV + Q F++ FG + + V TVDG QG+EKD+
Sbjct: 1596 RLRTEYKGIDFDFRVGVVSMYRGQVLELQRAFEQRFGADIKGKVQFHTVDGFQGQEKDII 1655
Query: 692 IFSCVRASDK-KSIGFLADYRRMNVGITRAKSSILVVGCASTL-REDKHWNNLVKSAEKQ 749
I SCVRA +S+GFL+D RRMNV ITRAKSS+ ++G A+TL R D +W +++ A +
Sbjct: 1656 ILSCVRAGPGLQSVGFLSDVRRMNVSITRAKSSLFILGNAATLERSDSNWRQIIQDARTR 1715
Query: 750 DCLFRVSKPY 759
+ L V Y
Sbjct: 1716 NVLTDVGPSY 1725
>gi|385305772|gb|EIF49721.1| putative nuclear rna processing factor [Dekkera bruxellensis
AWRI1499]
Length = 1066
Score = 285 bits (729), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 239/850 (28%), Positives = 373/850 (43%), Gaps = 172/850 (20%)
Query: 17 FCKIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEV 76
F K +L W Y VD G + + D + +DY TFEPLL E
Sbjct: 176 FYKHVLSWSY----------EHSGDFPVDSNISGYKVIADEFDTAEDYQKTFEPLLLLEC 225
Query: 77 KAQIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADEVESISPNDLLLLSKEEFKE 136
I + K + ++L + D F+ Y + + I+ LLL S
Sbjct: 226 WQGIQRAKQVGGEKPFRLTVASRSA-TDSFY---DVYSTVDKKMITEQRLLLES------ 275
Query: 137 GSTFPTTYAFALVEHCQANLLRLRMYLAGE-----VIHINKDAVKSQRLLNIHSLITSSV 191
A V++ + +L+ + + R + I+SS
Sbjct: 276 -----DLMALMFVDNLPSTDKQLQXRHVSNRKCSCFARVRNIKXSNSRYAELTLRISSST 330
Query: 192 SAVE-----KRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQ---SW 243
V+ + +++ ++T+ REY +L VG LP+ DL+ S + K+ Q + S
Sbjct: 331 KMVKFLSPSTEIVGMRVMQMTTVEREYSSL--VG-LPYYDLVKSIT-KAVPCQPEGLDSS 386
Query: 244 KIPGLLHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPAR 303
++ + Y + N SQ AI + ++ F LIQGPPGTGKT+TILG++ L
Sbjct: 387 RVAEIKKTY---DVNDSQAVAIAGAVHKEGFSLIQGPPGTGKTKTILGVIGHFLTRM--- 440
Query: 304 VHSKGGLREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKP 363
A R+ PI ++
Sbjct: 441 ----------------------------------AVARNGSHPI------------QMPX 454
Query: 364 EVVNSSRRYRVRVLVCAPSNSALDEI-------------------VLRLLNTGIRDENIR 404
+ V S+ +R R+LVCAPSN+A+DE+ ++RL T +E ++
Sbjct: 455 QQVXRSKEHR-RILVCAPSNAAVDELVLRLMRGIKNSKGVIFKPRLVRLGRTDAINEQVK 513
Query: 405 SYT------------PKIVRIGLKAHHSVNSVAIDHLVE--------------------- 431
T KI ++ H + D L E
Sbjct: 514 GITLEELVDSKLSSVEKIDDNAIREQHRKCIMERDELREKLDSGKLPEXEIAKAEMRLQD 573
Query: 432 --QKRDDSAAD----KQKHGATRKDRD----SIRSAILNEAVIVCSTLSFSGSALLSKLN 481
QKR + ++K + ++R+ +I+ ILN+A +VCSTLS S +L+ ++
Sbjct: 574 VVQKRRELGKKLDEIREKRSVSYRNREIERRNIQFKILNDAEVVCSTLSGSAHDVLASMS 633
Query: 482 HGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKR 541
FD V+IDEAAQ E + ++PL GC + +VGDP QLP TV+S A Y SLF R
Sbjct: 634 LTFDTVVIDEAAQCTELSAIIPLRYGCTKCVMVGDPNQLPPTVLSQKAASYKYEQSLFVR 693
Query: 542 LQRA-GYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSF 600
+Q V +L QYRMHPE+ FPS+EFY L DG ++ + ++ W+ +GP+ F
Sbjct: 694 IQNNHKXSVYLLNVQYRMHPEISMFPSKEFYHSRLLDGPNMAENNSKPWNS--LYGPYRF 751
Query: 601 FDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQ 660
FD+ +G E Q + S N E L L L + ++ + + IISPY+ QVK +
Sbjct: 752 FDV-KGAEEQNEATKSVFNYTEASLALELVEDLFEKFSEINWAGLVGIISPYKEQVKLLK 810
Query: 661 ERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRA 720
+ F FG +D TVDG QG+EK+V +FSCV A + IGFLAD RRMNV +TRA
Sbjct: 811 KLFINRFGRIITTQIDFNTVDGFQGQEKEVIVFSCVXAENHTGIGFLADIRRMNVALTRA 870
Query: 721 KSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRVSKPYASFFSDENLESMRKNATTDNV 780
+SS+ ++G L +K W +L+++A ++ + +++ + + N B
Sbjct: 871 RSSLWILGSKXALVNNKTWRDLIENATERHLVEXITRGFT-----------KSNTANXBT 919
Query: 781 QGADGHVPHD 790
GH P D
Sbjct: 920 FENXGHKPVD 929
>gi|302766231|ref|XP_002966536.1| hypothetical protein SELMODRAFT_439557 [Selaginella moellendorffii]
gi|300165956|gb|EFJ32563.1| hypothetical protein SELMODRAFT_439557 [Selaginella moellendorffii]
Length = 1019
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 242/764 (31%), Positives = 351/764 (45%), Gaps = 149/764 (19%)
Query: 51 LREVKDTYKDVDDYLATFEPLLFEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGFHLPS 110
L EV T++ YL F PL FEE KA + + + ++ + + FHL
Sbjct: 343 LLEVPLTFQSYKHYLEIFRPLCFEEFKAHLERSLETMDLSRSDVVTAFSLRQEGYFHL-- 400
Query: 111 VTYEADEVESISPNDLLLLSKEEFKEGSTFPTTYAFALVEHCQANLLRLRMYLAGE-VIH 169
V ++ VE N+LL+ + H L +LR L E H
Sbjct: 401 VEFDGHTVEK--RNNLLVK-----------------VYLPHSCERLSKLREMLVTESTWH 441
Query: 170 INKDAVKSQRLLNIHSLITSSVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLIL 229
+NK + S++T RE A+ ++ P + IL
Sbjct: 442 LNK------------------------------LTSVTTFIREQQAMAAMHLFPLLETIL 471
Query: 230 SASEKSSGSQDQSWKIPGLLHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTI 289
SAS S+ QS +P L ++ +N SQL +I + + LIQGPPGTGKT+TI
Sbjct: 472 SASPPREISRTQS--LPPQLRSKLRREYNESQLSSI-AAVADQMISLIQGPPGTGKTRTI 528
Query: 290 LGLLSAILHATPARVHSKGGLREIKRGPELPMHEKY-----NHWGRASPWLVGANPRDNI 344
LG++SA+L A + + G E HE NH RD +
Sbjct: 529 LGIVSALL----AHANEEAGKAE--------EHEMLDVLTDNH---------QTEFRDKL 567
Query: 345 MPIDGDDGFFPTTGNELKPEVVNSSRRYRVRVLVCAPSNSALDEIVLRLL--NTGIRDEN 402
G + G P +V RV A +D +V + + N G+ +
Sbjct: 568 KATRISHGVYNYDGGTYWPSIVRVGDTKRVHSQAMA---VHIDRLVAKRMAENAGVHN-- 622
Query: 403 IRSYTPKIVRIGL-------KAHHSVNSVA----------IDHLVEQKR----DDSAADK 441
+++P+ +R L +A + VA + L EQ+R + +
Sbjct: 623 --AHSPQELRFKLDEVLGNMQALAAPAEVASQDGIPKLDKLAGLQEQQRLLLSELIKVEN 680
Query: 442 QKHG----ATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHG------------FD 485
++HG + RK + +++ +L EA +V +TLS G + S L FD
Sbjct: 681 REHGFLMGSNRKKKQAMKLEVLREADVVLTTLSGCGGHIYSTLMEFIATRDAQAAEMLFD 740
Query: 486 VVIIDEAAQAVEPATLVPL----ATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKR 541
VIIDEAAQAVEP+TL+PL AT K + L+GDP QLPATV+S A L + S+F+R
Sbjct: 741 AVIIDEAAQAVEPSTLIPLQLLKATRGKCI-LIGDPKQLPATVLSVPASRLLFDCSMFER 799
Query: 542 LQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDV-EDYTTRDWHEYRCFGPFSF 600
Q+ GYP YRMHPE+RSFPS +Y L+DGS V + +H R F P+ F
Sbjct: 800 FQKNGYP-------YRMHPEIRSFPSTHYYGGQLKDGSTVLHGNRSAPFHRERRFEPYRF 852
Query: 601 FDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQ 660
FDI +G+E +P S N DE +F+ L L YP+ ++ +I+PY+ Q K Q
Sbjct: 853 FDIRDGQE-RPGSMQSLTNPDEAEFIFQLLRVLKERYPEEVRPGRIGVITPYQEQRKVLQ 911
Query: 661 ERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRAS---DKKSIGFLADYRRMNVGI 717
E + +D+ TVD QGRE D+ + S VRAS + +GFLAD RRMNV +
Sbjct: 912 ENMRSL-----HSGIDVNTVDSFQGREADIIVLSTVRASFGESQAGVGFLADVRRMNVAL 966
Query: 718 TRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRVSKPYAS 761
TRAK S+ VVG A TL + W L++ ++ + V KPY S
Sbjct: 967 TRAKFSLWVVGNARTLERNSDWKALLQDCRRRGLVSSVRKPYHS 1010
>gi|328770910|gb|EGF80951.1| hypothetical protein BATDEDRAFT_24512 [Batrachochytrium dendrobatidis
JAM81]
Length = 1938
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 252/875 (28%), Positives = 394/875 (45%), Gaps = 127/875 (14%)
Query: 13 SIFRFCKIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLL 72
SI KI+L WD + SQ ++ SKK + V + ++ DY+ FEPLL
Sbjct: 1100 SIKDLYKIVLSWDIS--MDASQLPSNIKSKK-------MVVVPNMFQLPIDYINCFEPLL 1150
Query: 73 FEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADE--VESISPNDLLLLS 130
F E Q +Q +DE + + L+ D H ++ + + ++ +S N +LLL
Sbjct: 1151 FLECWQQFVQARDELHNSDSIVILIHSVQMVDDMHDITLLAQPSDMKLQQLSENTILLL- 1209
Query: 131 KEEFKEGSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSS 190
T P + L +R Y +V V Q L I
Sbjct: 1210 --------TMPESNITLLA------CIRSMSYKDNDVY------VVCQTFLGNRMQIIPH 1249
Query: 191 VSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLH 250
+ K +L + SL+T REY L ++ S+P IL ++ + ++ +
Sbjct: 1250 LKPKSKWDATL-VFSLTTFMREYRTLIAINSIPLSKEILQPAQTKQLAPNK-----ARVD 1303
Query: 251 EYIKE-NHNASQLEAIHEGL-LRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKG 308
EY + N Q AI + + FVLIQGPPGTGKT+TILGL+ A L T + G
Sbjct: 1304 EYQQNLKVNFPQANAIAAAIECKSGFVLIQGPPGTGKTKTILGLIGA-LQCTATVISLPG 1362
Query: 309 GLREIKRGPELPMHEK--------YNHWGRASPWLVGANPRDNIMPIDGD-----DGFFP 355
K L H++ +H + L+ P + ID DG
Sbjct: 1363 -----KSNERLNSHQQNLAATSSASSHIPASKKRLLCCAPSN--AAIDEIARRLIDGILN 1415
Query: 356 TTGNELKPEVVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGI----------------- 398
G KP++V R + + LD +V L T I
Sbjct: 1416 LKGQIYKPKIV----RVGTTAIHADIKSVTLDYLVEERLKTDIDYQKADSKIHDAGTNRS 1471
Query: 399 -----------RDENIRSYTPKIVRIGLK----AHHSVNSVAIDHLVEQKRDDSAADKQK 443
+N+R++ + + I K + + + K D+ A +
Sbjct: 1472 DIFKEMAQLKSERDNLRAFEDQPIEISGKTPTPSTTKLREIGARMAALAKLLDNEAMSKN 1531
Query: 444 HGATRKDRD--SIRSAILNEAVIVCSTLSFSGSALLSKLNH-GFDVVIIDEAAQAVEPAT 500
G +R +IR+ IL EA +V +TLS +G S+ F VI+DEA QAVE +
Sbjct: 1532 DGGVELERAKRNIRAKILAEADVVLATLSGAGHNQFSEAKQCTFHTVIVDEACQAVELSC 1591
Query: 501 LVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGY-PVKMLKTQYRMH 559
L+PL G ++ +VGDP QLP T++S VA+ Y SLF+RL ++ + +L QYRMH
Sbjct: 1592 LIPLCYGAQKCIMVGDPNQLPPTILSQVAQDYSYDQSLFQRLMKSCKDSIHLLSIQYRMH 1651
Query: 560 PEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWIN 619
P + FPS FY+ AL+D + + WH +R F P+ + G+E Q S N
Sbjct: 1652 PHISLFPSLNFYNSALKDAPGLNTICSAPWHSHRLFPPYLLLNAVSGQE-QFGSRKSLFN 1710
Query: 620 IDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITT 679
+E + L + + +P +K +++ II+ Y+ Q ++ ++ F + FG VDI T
Sbjct: 1711 HEEASLCVGLVKTICTNFPDIKFFARIGIITFYKLQARKLRDMFVKHFGHAILNSVDINT 1770
Query: 680 VDGCQGREKDVAIFSCVRAS--DKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDK 737
VDG QG+EKD+ + SCVRAS +S+GF++D RRMNV +TRAK S++++G + +L+ D
Sbjct: 1771 VDGFQGQEKDIILLSCVRASKDTDRSVGFISDTRRMNVALTRAKHSLIIIGNSHSLKTDP 1830
Query: 738 HWNNLVKSAEKQDCLFRVSK------PYASF----------FSDENLESMRKNAT----T 777
W NLV +A+++ ++S A+F S + + RKN T
Sbjct: 1831 VWKNLVNNAKQRSLTLKISSKDIQVGSNATFSNLIDDIPSKSSSSGMTNNRKNETQQLSN 1890
Query: 778 DNVQGADGHVPHDDETMHYANTGDADQGQADDIDN 812
+N G G+ P + +Y+N+ D QG N
Sbjct: 1891 NNQPGKHGNEP---KKRNYSNSYDYQQGSNKKFSN 1922
>gi|86196492|gb|EAQ71130.1| hypothetical protein MGCH7_ch7g537 [Magnaporthe oryzae 70-15]
Length = 1986
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 197/636 (30%), Positives = 297/636 (46%), Gaps = 149/636 (23%)
Query: 198 LFSLKICSLSTIAREYLALRSVGSLPFKDLILSA--SEKSSGSQDQSWKIPGLLHEYIKE 255
L L+I +++T+ RE+ AL S L + DL+ +E S + +I Y
Sbjct: 1221 LRGLRITNMTTVEREFAALES---LQYYDLMTEVLDAEPSPILNFSNDRIQSYQDNY--- 1274
Query: 256 NHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAIL-----HATPARVHSKGGL 310
N Q AI F L+QGPPGTGKT+TI+ ++ A+L A P R+ G
Sbjct: 1275 QLNRGQAAAIINAKENDGFTLVQGPPGTGKTKTIIAMVGALLTGKISRAPPTRIKPANGA 1334
Query: 311 REIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNSSR 370
E PM +K
Sbjct: 1335 DE-------PMAQK---------------------------------------------- 1341
Query: 371 RYRVRVLVCAPSNSALDEIVLRL------------------------LNTGIRDENIRSY 406
+LVCAPSN+A+DE+VLRL +N +RD +
Sbjct: 1342 -----LLVCAPSNAAVDELVLRLKAGIKDTNGNTHKINVLRLGRSDAINAAVRDVTLDEL 1396
Query: 407 TPKIVRIGLKAHHSVNS-------------------VAIDHLVEQKRD------------ 435
+ + L + S NS A+ +EQ R
Sbjct: 1397 VKEKMDAALNVNGSGNSGPTDREKLHQEAGEIKVRVAALREALEQARAAGDHGQTNSLQR 1456
Query: 436 --DSAADKQKHGATRKDRD----------------SIRSAILNEAVIVCSTLSFSGSALL 477
D KQ + DRD +I+ +IL+EA ++C+TLS +G +
Sbjct: 1457 NLDELRKKQGQIGAQIDRDKASGNTYAREAEIKRRNIQQSILSEAHVLCATLSGAGHDMF 1516
Query: 478 SKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTS 537
L F+ VIIDEAAQ VE + L+PL G + LVGDP QLP TV+S A GY S
Sbjct: 1517 KSLQVEFETVIIDEAAQCVELSALIPLKYGASKCILVGDPKQLPPTVLSQSAARYGYDQS 1576
Query: 538 LFKRLQRAGYP--VKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCF 595
LF R+Q+ +P V +L QYRMHPE+ +PS+EFY+ L DGSD+ + WH+
Sbjct: 1577 LFVRMQQ-NHPGKVHLLDCQYRMHPEISLYPSKEFYEGLLADGSDMAKLRQQPWHDNPLL 1635
Query: 596 GPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQ-LKSSSQLAIISPYRH 654
GP+ FFD+ EG + + + S +N +E++ + ++ K + Y + ++ II+PY+
Sbjct: 1636 GPYRFFDV-EGIQERGSRGQSLVNTNEINVAIQIYTKFQADYASSIDMKGKIGIITPYKA 1694
Query: 655 QVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMN 714
Q+ +++F+E +G + ++ T D QGRE ++ IFSCVRAS IGF+ D RRMN
Sbjct: 1695 QLFALRQKFQERWGEGVLEDIEFNTTDAFQGRECEIIIFSCVRASPTGGIGFMTDIRRMN 1754
Query: 715 VGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQD 750
VG+TRA+SS+ ++G + LR+ + WN L++ ++ +D
Sbjct: 1755 VGLTRARSSLWILGDSRALRQGEFWNKLIEDSKARD 1790
>gi|429329799|gb|AFZ81558.1| hypothetical protein BEWA_009720 [Babesia equi]
Length = 929
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 219/662 (33%), Positives = 313/662 (47%), Gaps = 131/662 (19%)
Query: 202 KICSLSTIAREYLALRSVGSLPFKDLIL-------SASEKSSGSQDQ-SWKIPGLLHEYI 253
K+ SL+TI RE+ AL + +P ++L+L + ++ ++ ++ ++KIP L +
Sbjct: 243 KLSSLTTILREFNALCMMKQMPLRNLLLKFEPMDNTCTQPNTCTKLLLNFKIPDALKRTL 302
Query: 254 KENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLREI 313
+ +N+ QL AI L + LIQGPPGTGKT TI+G++S IL+A K ++I
Sbjct: 303 ESKYNSGQLCAISNSLNQSGISLIQGPPGTGKTTTIIGIISVILYALTPISSKKNDYKKI 362
Query: 314 KRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDD--GFFPTTGNELKP-------- 363
+ ++ + PW + DD G+F NE
Sbjct: 363 V--------QSFDTFHIKHPWYFQD---------ESDDVGGYFDDLRNEDYGYDYDRIYN 405
Query: 364 --EVVNSSRRYRV-------------RVLVCAPSNSALDEIVLRLLNT--GIRDENIRSY 406
+ +NS++R R R+L+CAPSN+A+DEIV RL+ T GI D N Y
Sbjct: 406 IYDSLNSTQRKRCNNIKIDFKGKNTRRILICAPSNAAVDEIVKRLVATDGGIFDSNGNKY 465
Query: 407 TPKIVRIGLKAHHSVNSVAIDHLVEQ--KRDDSAADKQKHGATRKDRDSIRSAILNEAVI 464
P + R+G H + +++ V++ ++DS K + K R SI IL + I
Sbjct: 466 KPTVTRVGPNFHEDLIEYSLNTKVDKWFSKNDSLQIKDEKSMNFK-RASIAKDILLNSEI 524
Query: 465 VCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATV 524
VCSTLS GS L L + FD +IIDEA QAVE +TL+PL GCK+ LVGDP QL ATV
Sbjct: 525 VCSTLSGCGSKELYGLANCFDTLIIDEATQAVELSTLIPLNLGCKRAILVGDPCQLSATV 584
Query: 525 ISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDY 584
S A L Y SLFKRLQ GYPV LK QYRM P++ FPS FY L + + +
Sbjct: 585 CSKAAIQLNYEQSLFKRLQLCGYPVNFLKLQYRMDPQITRFPSMYFYKNQLINADESDSR 644
Query: 585 TTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSS 644
W + P F+ I + +ES+ S++N EV+ V L +I + + +
Sbjct: 645 RHLGWRMFPLLRPTVFYAI-DSQESR--SDTSYVNEMEVELVCQLLEIIIEILLSVPGMT 701
Query: 645 Q------LAIISPYRHQVKQFQ----ERFK-----ETFGVESQKV--VDITTVDGCQGRE 687
Q +A+ISPY QV + ER K T E K + I+TVDG QG E
Sbjct: 702 QDEIKQKIAVISPYSAQVDILKSTIYERIKMFHNPPTLTPEESKATQIYISTVDGFQGME 761
Query: 688 KDVAIFSCVRAS----------------------------DKKSI--------------- 704
KD+ IFS VR D KS+
Sbjct: 762 KDIIIFSAVRTKYVGNRKAINAKIEDLTTPSILTIDKEPHDPKSLEQFQKLMESYLEKSK 821
Query: 705 -------------GFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDC 751
F++D RR+NV ITRA++++ +VG L + +HW L K
Sbjct: 822 SNPPDLDSNVNDASFISDRRRINVAITRARNNLFIVGNPRYLLDHRHWYALYNHYAKTGA 881
Query: 752 LF 753
LF
Sbjct: 882 LF 883
>gi|213405365|ref|XP_002173454.1| helicase sen1 [Schizosaccharomyces japonicus yFS275]
gi|212001501|gb|EEB07161.1| helicase sen1 [Schizosaccharomyces japonicus yFS275]
Length = 1719
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 233/771 (30%), Positives = 375/771 (48%), Gaps = 98/771 (12%)
Query: 25 DYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKAQIIQKK 84
++F+ + + ++ +S K++ K V +++ V Y +P++F E +QI +K
Sbjct: 928 NFFKEILKWPPSSNHHSPKLEFHK-SYSPVINSFSSVKHYQEVMQPMIFLECWSQIQSEK 986
Query: 85 DEEEVQEWKLRLVMECGEADGFHLPSVTYEADEV-ESISPNDLLLLSKEEFKEGSTFPTT 143
+ K L+ +D + E+D V ++ ++++L+ F
Sbjct: 987 MNLSTRCIKSTLLKRSAVSDFVDIMVGALESDLVGYPLADTEMVVLA---------FNDE 1037
Query: 144 YAFALV--EHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSAVEKRLFSL 201
Y L E A + RL + +G +I +++ + + + ++ + KR+ +L
Sbjct: 1038 YCNELTKDECVFAQVTRLNRHKSGPII-----TLRTCPPVKFMNRLQNNCTIYFKRMMNL 1092
Query: 202 KICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIKENHNASQ 261
ST R+Y A LP+ +L+ + SQ + + N Q
Sbjct: 1093 -----STYMRQYAA---TCGLPYYNLVEDVIKGHPCSQPVKHSAAEIERAQKRYGVNEPQ 1144
Query: 262 LEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAIL------HATPARVHSKGGLREIKR 315
AI L F LIQGPPGTGKT+TI+G++SA+L H T R SK + K+
Sbjct: 1145 AHAILASLDNVGFTLIQGPPGTGKTKTIVGIVSALLLDLNNYHIT--RPDSKQDSEKTKQ 1202
Query: 316 GPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVV--------- 366
L +P +N + + + GF G+ KP++V
Sbjct: 1203 KILL-----------CAP----SNAAVDEVILRLKRGFTLQDGSTYKPKLVRIGNAESVN 1247
Query: 367 ----NSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRD---------ENIRSYTPKIVRI 413
++S Y+ + N + VL+ L T RD EN++ K + I
Sbjct: 1248 MYVRDTSIEYQTEKQLLEVCNDLPELTVLKEL-THWRDVYYDSLQAIENLQ----KQLDI 1302
Query: 414 GLKAHHSVNSVAID--------HLVEQKRDDSAADKQKHGATRK-----DRDSIRSAILN 460
+ +V++V+ + +L EQK D+ Q H R R I+ A+L
Sbjct: 1303 AKSINENVDAVSTELNKMFEQKNLAEQKIDEF----QDHKIARNRDLDMTRRKIQQALLK 1358
Query: 461 EAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQL 520
E +VCSTLS SG L+++ N F+ VIIDEAAQAVE T++PL G + LVGDP QL
Sbjct: 1359 ECDVVCSTLSGSGHELVARANLTFNTVIIDEAAQAVELDTIIPLKYGAARCVLVGDPNQL 1418
Query: 521 PATVISPVAEHLGYGTSLFKRLQRAGYP--VKMLKTQYRMHPEVRSFPSREFYDEALEDG 578
P T++S A L Y S+F R+Q +P +++L QYRMHPE+ FPS +FY+ L DG
Sbjct: 1419 PPTILSKKAVKLNYSQSMFVRIQN-NFPEQLELLSIQYRMHPEISQFPSCQFYNSRLLDG 1477
Query: 579 SDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYP 638
+V T + WH+ FG + FD+ G E Q + + S N +E V LF + S +P
Sbjct: 1478 DNVATKTLQPWHKNPLFGQYRVFDVR-GTEKQ-SKTFSLYNPEEAKSVTDLFDLMTSSFP 1535
Query: 639 QLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRA 698
+ +S++ I++PYR Q+K+ + F +G D+ T+DG QG+EKD+ I SCVR+
Sbjct: 1536 TVDFASKIGIVTPYRSQLKELRRAFSRKYGRAFASKFDMNTIDGFQGQEKDIIILSCVRS 1595
Query: 699 SDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQ 749
SIGFL D+RR+NV +TRA+SS+ +VG TL D W +L+ +A+++
Sbjct: 1596 ETGGSIGFLRDFRRLNVALTRARSSLFIVGNVETLFSDDLWGSLLANAKER 1646
>gi|403415166|emb|CCM01866.1| predicted protein [Fibroporia radiculosa]
Length = 1926
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 233/779 (29%), Positives = 367/779 (47%), Gaps = 98/779 (12%)
Query: 19 KIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKA 78
K +L W+Y D + L V D + DV + EPLL E
Sbjct: 1075 KTLLSWNY-----------DHEGPNPPGNPIKLAAVPDRFTDVHHFRNIMEPLLLLECWT 1123
Query: 79 QIIQKKDE-EEVQEWKL---RLVMECGEADGFHLPSVTYEADEVESISPNDLLLLSKEEF 134
Q+I+ K+E +E E + + V E E + S+T ++S D++LL
Sbjct: 1124 QLIESKEEAQETYECHIGSRQFVDEWAEIEA----SITQIVKRDWNLSDADVVLLRHPAS 1179
Query: 135 KEGSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSAV 194
++ A V++ +A+ + ++ + I L +
Sbjct: 1180 RQP-------ALGKVQNYRASPMGIQ--------------------VTIRCLARGGDPGL 1212
Query: 195 EKRLFSL--KICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEY 252
+ L K+ +L+T+ REY AL ++ D +L A+ S S S ++ + Y
Sbjct: 1213 QPNTVWLLSKVLNLTTLHREYGALMALPYYDSCDTVLRAN-LSLPSPSDSREVQTTMKAY 1271
Query: 253 IKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLRE 312
+ N Q +AI L F LIQGPPGTGKT TI GL+ A L P L
Sbjct: 1272 ---SVNEPQAKAILYSLKADGFALIQGPPGTGKTSTICGLVHAFLSRRP----KPATLVA 1324
Query: 313 IKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNSSRRY 372
+ R +P E +P +N + + +G + P+VV
Sbjct: 1325 VGRTTNMPNKEPVKKVLLCAP----SNAAIDEIAFRLKEGVSGAGTQPVSPKVVRVGTTA 1380
Query: 373 RVRVLVCAPSNSALDEIVLRLLNT-----GIRD------------ENIRSY-TPKIVRIG 414
++ +V + +L+ ++ + +N G D E++++ K+ I
Sbjct: 1381 SMKAVV---KDISLEHLIEQKINANPSIGGSADSGSDIMRLRAELESVKTLRQQKLDEIS 1437
Query: 415 LKAHHSVNSVAIDHLVEQ---------KRDDSAADKQKHGATRKD--RDSIRSAILNEAV 463
++ +++++ V++ ++ D DKQK + D R R+ +L EA
Sbjct: 1438 NIHDNAAKTLSLEEEVKRLNKQRFALTQQFDKLKDKQKSDSRTMDATRRRFRTEVLLEAD 1497
Query: 464 IVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPAT 523
+VCSTLS + L +L+ F++++IDEAAQA+E ++L+PL C++ +VGDP QLP T
Sbjct: 1498 VVCSTLSGAAYEYLEQLD--FELIVIDEAAQAIELSSLIPLKYRCRRCIMVGDPQQLPPT 1555
Query: 524 VISPVAEHLGYGTSLFKRLQRA-GYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVE 582
V S A GY SLF R QR V +L QYRMHP++ PS+ FYD L+DG D+
Sbjct: 1556 VKSQEACKFGYNQSLFVRFQRQRPEAVHLLSIQYRMHPDISLVPSQLFYDRKLQDGPDMA 1615
Query: 583 DYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKS 642
T R WH G + FFD+ G+E + + S+IN E + LF++L Y
Sbjct: 1616 TKTKRPWHSNEKLGTYHFFDVAGGRE-EAGRNHSFINRAECQVAIALFNRLRREYSTFDF 1674
Query: 643 SSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRAS-DK 701
++ I+S YR Q+ + + F++ FG + +VD TVDG QG+EKDV I SCVRA +
Sbjct: 1675 DYKVGIVSMYRGQIFELRRMFEQRFGADISSIVDFHTVDGFQGQEKDVIILSCVRAGPNV 1734
Query: 702 KSIGFLADYRRMNVGITRAKSSILVVGCASTL-REDKHWNNLVKSAEKQDCLFRVSKPY 759
+++GFL D RRMNV +TRAKSS+ V+G A+TL R D W ++ A ++ L V Y
Sbjct: 1735 QTVGFLRDMRRMNVALTRAKSSLFVLGHAATLERSDGTWRQIISDARERSRLVNVDVSY 1793
>gi|353238887|emb|CCA70818.1| related to SEN1 protein [Piriformospora indica DSM 11827]
Length = 1917
Score = 279 bits (714), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 254/830 (30%), Positives = 383/830 (46%), Gaps = 116/830 (13%)
Query: 19 KIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKA 78
+IIL W+Y + + D + V D++ YL F PLL E
Sbjct: 1080 RIILSWNY----------DHTGPEPPDSTSFVYKPVPDSFWGHRQYLEIFHPLLLLECWN 1129
Query: 79 QIIQKKDE--EEVQEWKLRLVMECGEADGFHLPSVTYEADEVESISPNDLLLLSKEEFKE 136
+++ K+E E+VQ C A G + + E D + + + +L++ +
Sbjct: 1130 SLVKSKEEHLEKVQ---------CTVA-GKMITDIWVEVDVSIERTTHSVCILAETDI-- 1177
Query: 137 GSTFPTTYAFALVEHCQ-----ANLLRLRMYLAG--EVIHINKDAVKSQRLLNIHSLITS 189
L+EH A + R G + +KD K L+ +
Sbjct: 1178 ----------VLLEHASGVRALAKVHSFRDTREGLQATLRYSKDDAK----LDFERSMAL 1223
Query: 190 SVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSAS-EKSSGSQDQSWKIPGL 248
S + R+FSL ST+ REY AL + S F+D +L A E S ++S +
Sbjct: 1224 QSSWLVTRVFSL-----STVHREYAALLGLSSYEFEDSVLQARLEPHSAPTEES-----I 1273
Query: 249 LHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHS-- 306
+ N Q A+ L + F LIQGPPGTGKT TI GL+ A L + + S
Sbjct: 1274 SRTMAAQKLNYPQARAVLSSLHTRGFSLIQGPPGTGKTSTICGLVGAFLSSRDSATTSIT 1333
Query: 307 KGGLREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDG--DDGFFPTTGNELKPE 364
GG + P+ K LV A I + +G + + G +P+
Sbjct: 1334 VGG------PSQKPIPRKV---------LVCAPSNAAIDEVARRIHEGVWKSDGQRTRPQ 1378
Query: 365 VVNSSRRYRVRVLVCAPSNSALDEIVL-RLLNTGIRDEN----IRSYTPKIVRIGLKAH- 418
VV R + + + +LD +V RL T E+ + S ++ I H
Sbjct: 1379 VV---RLGPISAMSLGVRDISLDRMVENRLSGTESTGEDSSIEVSSLRGRLAHIKQLRHE 1435
Query: 419 ----------HSVNSVAIDH-LVEQKRDDSAADKQKHGATRKDRDSIRSA---------- 457
++ ++ +D L E + + Q + A K ++ +R+A
Sbjct: 1436 KQMELSAVNDNTARALELDRELRELTSNRTQLTSQLNAALDKGKERMRAADSAKRKARVE 1495
Query: 458 ILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDP 517
IL+EA +VC TLS SG + + FD+VIIDEAAQA+E ++L+PL ++ LVGDP
Sbjct: 1496 ILSEADVVCCTLSGSGHEFIDRTE--FDLVIIDEAAQAIELSSLIPLKFASQRCILVGDP 1553
Query: 518 VQLPATVISPVAEHLGYGTSLFKRLQRAGYP--VKMLKTQYRMHPEVRSFPSREFYDEAL 575
QLP TV+S A +GY SLF RLQ + P + +L QYRMHPE+ PS FY+ L
Sbjct: 1554 QQLPPTVLSQTATKMGYNRSLFVRLQDS-MPDRIHLLSIQYRMHPEISRLPSVLFYERKL 1612
Query: 576 EDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLIS 635
+DG D+ T R WH+ G + FDI G E Q S N+ EV L L+ +L S
Sbjct: 1613 QDGPDMAVKTRRPWHDDSNLGVYRLFDIR-GNEEQADLGYSQYNLAEVKAALELYKRL-S 1670
Query: 636 MYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSC 695
+ + + IIS YR Q+ + ++ F +G E VD TVDG QG+EKDV I SC
Sbjct: 1671 ATLRTPTEVTIGIISMYRAQLTKLRDAFIARYGREILSKVDFNTVDGFQGQEKDVIILSC 1730
Query: 696 VRAS-DKKSIGFLADYRRMNVGITRAKSSILVVGCASTLRE-DKHWNNLVKSAEKQDCLF 753
VRA + SIGFL+D RR+NV ITR +SS+ ++G A+TLR D+ W+ +++ A + L
Sbjct: 1731 VRAGPNVSSIGFLSDARRINVAITRCRSSLFILGDAATLRRSDQLWSKIIEDANSRGSLL 1790
Query: 754 RV--SKPYASFFSDENLESMRKNATTDNVQGADGHVPHDDETMHYANTGD 801
+V P S FS + + + T+ + + + P + A+T D
Sbjct: 1791 QVHDGDPPGSRFSTDGYDRQKYPTTSSRLSQREPNAPQNTLGNKSASTTD 1840
>gi|145349670|ref|XP_001419251.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579482|gb|ABO97544.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 634
Score = 279 bits (714), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 177/535 (33%), Positives = 282/535 (52%), Gaps = 38/535 (7%)
Query: 51 LREVKDTYKDVDDYLATFEPLLFEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGFHLPS 110
+ +V + + +Y+ T+ P + E + ++ E K + FH+ +
Sbjct: 1 MTQVPLRFDNAREYVRTYAPFVLAECDEHV--RRRSGEGTSVKAEAARAAERDEEFHVVA 58
Query: 111 VTYEADEVESISPNDLLLLSKEEFKEGSTFPT--TYAFALVEHCQANL-LRLRMYLAGEV 167
+ E +S NDL+LLSKEE T T+A A+V+ + +RLR+YL +
Sbjct: 59 FDVSETDSERLSDNDLVLLSKEELTAKVTEDARLTHALAVVDGREMKTRVRLRLYLP-DT 117
Query: 168 IHINKDAVKSQRLLNIHSLITSSVSAVE-KRLFSLKICSLSTIAREYLALRSVGSLPFKD 226
+ V S+ + ++++AV+ +R F + +LST RE+LA+ + + P+
Sbjct: 118 TMTTEARVHSESDYKRFRTVRNALTAVKGERWFLKSLANLSTFTREWLAIHAFPAFPYAA 177
Query: 227 LILSASEKSS---GSQDQSWKIPGLLHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGT 283
IL+ + + S +W +P L +++ + N SQ++A+ L R+ VL+QG PGT
Sbjct: 178 TILNGTPAAGIGGPSSVNAWSMPDGLKTFVERSCNDSQIKALESALTREPLVLVQGAPGT 237
Query: 284 GKTQTILGLLSAILHATPAR-------VHSKGGLREIKRGPELPMHEKYNHWGRASPWLV 336
GKT+TI+ LLS +LH+ P+ + +RE + EK W RASPWL
Sbjct: 238 GKTRTIIPLLSVLLHSVPSTSSRTIVDFKAYAKMREAR--VVATAEEKREAWMRASPWLR 295
Query: 337 GANPRDNIMP-----------IDGDDGFFPTT------GNELKPEVVNSSRRYRVRVLVC 379
NPRD P ++ + P++ + + + + R ++LVC
Sbjct: 296 TTNPRDAPPPPTLVAEKVSGSVNAESNVSPSSKPSSNGAVRVVAQTLGADAYRRSKILVC 355
Query: 380 APSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQKRDDSAA 439
APSN LDEIV ++ TG+ D N +Y+P +VR+G+ H SV V++D LV Q+ + A
Sbjct: 356 APSNEILDEIVSLIIKTGLVDGNGETYSPTVVRVGVNVHDSVRQVSMDALVSQRLGELGA 415
Query: 440 --DKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVE 497
D + +RD ++ AIL+EA +VCSTLSFSG+ + ++++ FD VIIDEA AVE
Sbjct: 416 HVDSVRKFEAAVERDRLKQAILDEANVVCSTLSFSGAGMFARMSTPFDAVIIDEATLAVE 475
Query: 498 PATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKML 552
P+TLVPL G KQV+L+GD +L ATV+S A Y S+F R ++ YPV L
Sbjct: 476 PSTLVPLCYGAKQVYLIGDDRELAATVLSSAAVEYKYDVSMFSRFRKCDYPVHSL 530
>gi|169609334|ref|XP_001798086.1| hypothetical protein SNOG_07756 [Phaeosphaeria nodorum SN15]
gi|160701819|gb|EAT85222.2| hypothetical protein SNOG_07756 [Phaeosphaeria nodorum SN15]
Length = 1955
Score = 279 bits (713), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 151/380 (39%), Positives = 221/380 (58%), Gaps = 24/380 (6%)
Query: 436 DSAADKQKHGATRKD--RDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAA 493
D++ D+++ + D R + AILN+A I+C+TLS SG + L+ F+ VIIDEAA
Sbjct: 1460 DNSKDEERLQSRNSDLSRRRAQEAILNDAHIICATLSGSGHEMFQGLSIEFETVIIDEAA 1519
Query: 494 QAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYP--VKM 551
Q VE + L+PL GC + LVGDP QLP TV S VA Y SLF R+++ +P V +
Sbjct: 1520 QCVELSALIPLKYGCAKCVLVGDPKQLPPTVFSKVASRHQYSQSLFARMEK-NHPNDVHL 1578
Query: 552 LKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQP 611
L TQYRMHPE+ FPSREFYD L DG D+ + WH+ FGP+ FFD+ + + P
Sbjct: 1579 LDTQYRMHPEISLFPSREFYDGKLMDGGDMATIRKQPWHQSMLFGPYRFFDVAGQQSAAP 1638
Query: 612 AGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVES 671
G S IN E++ + L+H+L S +P ++ II+PY+ Q+ + + RF +G +
Sbjct: 1639 KGH-SLINRAEIEVAMKLYHRLTSDFPDYNFRGKIGIITPYKSQLTELKTRFASVYGAQI 1697
Query: 672 QKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCAS 731
+ ++ T D QGRE ++ IFSCVRASD+ +GFL D RRMNVG+TRAKSS+ V+G A
Sbjct: 1698 IEDIEFNTADAFQGRESEIIIFSCVRASDRGGLGFLEDIRRMNVGLTRAKSSMWVLGHAP 1757
Query: 732 TLREDKHWNNLVKSAEKQDCLFRVSKPYASFFSDENLESMRKNATTDNVQGADGHV-PH- 789
+L + W LV+ A+++ F+ NL M ++ +G+V PH
Sbjct: 1758 SLSRGEFWRGLVEDAQER-----------KRFTTGNLTQMLNQHSSKFPAPKEGYVQPHR 1806
Query: 790 -----DDETMHYANTGDADQ 804
E M + +G +++
Sbjct: 1807 PLVEIKSEPMSRSGSGQSNE 1826
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 101/419 (24%), Positives = 176/419 (42%), Gaps = 93/419 (22%)
Query: 19 KIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKA 78
+ LGWDYF ++ + R ++ ++ T++ +DY +TFE L E
Sbjct: 1062 RAFLGWDYF---------HEGDYPPKARPEM-YSKIPTTFRTPNDYQSTFEAFLTLEAWQ 1111
Query: 79 QIIQKKDEEEVQEWKLRLVMECGEADGFHL--PSVTYEADEVESISPNDLLLLSKEEFKE 136
++++DE + + +++R+ D F ++T+ ++ I D+++LS K
Sbjct: 1112 GFVKERDENQAKPYEVRITSRAS-VDAFQELGSTMTFAENKEMRIGEGDIVVLSVSR-KL 1169
Query: 137 GSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSAVEK 196
+ P+ C A + + + G+ I + R+L + L SS
Sbjct: 1170 SANEPS---------CLARVSKAKR--KGQHIEV------LYRVLPANPL--SSSLQPNN 1210
Query: 197 RLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIKEN 256
+F LK+ S+ T+ REY AL+ + D I+ A + P L+ Y N
Sbjct: 1211 TVFGLKVQSIMTLEREYGALKGLQYYDLCDEIIKARPSPLLTYSDKQTEP-LIQNY---N 1266
Query: 257 HNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLREIKRG 316
N +Q +AI + AF LIQGPPG+GKT+TI +
Sbjct: 1267 VNKAQAKAIKSAIDNDAFTLIQGPPGSGKTKTITAI------------------------ 1302
Query: 317 PELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNSSRRYRVRV 376
VGA D++ + G T + + E + ++
Sbjct: 1303 -------------------VGAVLSDSLR----NRGTTITVPGQQRSETASK------KL 1333
Query: 377 LVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGL--KAHHSVNSVAIDHLVEQK 433
LVCAPSN+A+DE+V+R GI+ N IVR+G K + +V V ++ L+ ++
Sbjct: 1334 LVCAPSNAAVDELVMR-FKAGIKTLNGEVRKVNIVRLGRQDKLNAAVQDVCLEGLISKR 1391
>gi|255726544|ref|XP_002548198.1| hypothetical protein CTRG_02495 [Candida tropicalis MYA-3404]
gi|240134122|gb|EER33677.1| hypothetical protein CTRG_02495 [Candida tropicalis MYA-3404]
Length = 2061
Score = 278 bits (712), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 174/491 (35%), Positives = 249/491 (50%), Gaps = 72/491 (14%)
Query: 375 RVLVCAPSNSALDEIVLRL------------------------LNTGIRDENIRSYT--- 407
++L+CAPSN+A+DE+VLRL +N +RD +
Sbjct: 1395 KILICAPSNAAVDELVLRLRDGVINSAGEHMPLNVVRLGRSDAINVAVRDLTLEELVDKK 1454
Query: 408 ------------PKIV---------RIGLKAHHSVNSVAID---------HLVEQKRDDS 437
P I R L+ + ++ + H V +KR
Sbjct: 1455 LSEIKGSDVRIDPNITKELTKYTEERKALRKRLTTEALTDEEINKLEDEIHEVSKKRSQL 1514
Query: 438 AA--DKQKHGAT------RKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVII 489
A+ D+Q+ A+ +R +I++ IL+EA ++CSTLS S L++ L FD VII
Sbjct: 1515 ASKLDQQREQASIAARAKETNRRNIQNQILSEAQVLCSTLSGSAHDLVANLAVSFDQVII 1574
Query: 490 DEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAG-YP 548
DEA Q +E + ++PL GCK+ +VGDP QLP TV+S A Y SLF R+Q+
Sbjct: 1575 DEACQCLELSAIIPLRYGCKKCIMVGDPNQLPPTVLSQAAASYNYEQSLFVRMQKNNPES 1634
Query: 549 VKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKE 608
V ML QYRM+P + FPS EFYD L+DG + + TR WH+ P+ FFDI GK
Sbjct: 1635 VYMLDVQYRMNPMISKFPSAEFYDSKLKDGEGMLELNTRPWHKDDPLTPYRFFDI-SGKH 1693
Query: 609 SQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFG 668
+ A + S N DE L L KL+ P + S ++ IISPY+ QV + F FG
Sbjct: 1694 QKNALTQSLFNRDEARVALELTEKLMQYLPDGEFSGKVGIISPYKEQVNTIKREFIAKFG 1753
Query: 669 VESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVG 728
+D TVDG QG+EK++ I SCVRAS+ S+GFL+D+RRMNV +TRAK+++ ++G
Sbjct: 1754 RVILNEIDFNTVDGFQGQEKEIIIMSCVRASESGSVGFLSDFRRMNVALTRAKTTLWILG 1813
Query: 729 CASTLREDKHWNNLVKSAEKQDCLFRVSKPYASFFSDENLESMRKNATTDNVQGADGHVP 788
+LR D WN L+ A + C VSK Y F + + RK + QG+ P
Sbjct: 1814 NEDSLRRDAVWNRLLADATDRKC---VSKAYPGFLAQNG--NKRKAISNTKDQGSKKTKP 1868
Query: 789 HDDETMHYANT 799
+ + T
Sbjct: 1869 NPNTNTSATTT 1879
>gi|402075170|gb|EJT70641.1| DNA-binding protein SMUBP-2 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 2075
Score = 278 bits (712), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 233/777 (29%), Positives = 356/777 (45%), Gaps = 91/777 (11%)
Query: 16 RFCKIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEE 75
R + IL WD F E ND + REV +Y DY TF PLL E
Sbjct: 1128 RLHEAILEWDIF------HEGNDPPNG------YSCREVAKSYLSPVDYRDTFFPLLVNE 1175
Query: 76 VKAQIIQKKDEEEVQEWKLRLVMECGEADGF-----HLPSVTYEADEVESISPNDLLLLS 130
+ KDE + + ++++ D F +P + + E +S D++LLS
Sbjct: 1176 AWRSFVTSKDESTSKPFDIKIINRVS-VDKFMEVTTSIPMPNLKDKDRERLSDGDIILLS 1234
Query: 131 KEEFKEGSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSS 190
+ P + A H A + + M +I + + + +L+ +
Sbjct: 1235 ------SANEPLSDRDA--PHSLARVFKTMM--KKSIIEVTCRLISKGNGRFLQALMPGA 1284
Query: 191 VSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLH 250
L L+I +++T+ RE+ AL S+ +L A E S ++
Sbjct: 1285 ------DLRGLRITNMTTVEREFAALESLQYYDLMTEVLEA-EPSPVLTFSDERVQSFQD 1337
Query: 251 EYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGL 310
Y N Q AI F L+QGPPGTGKT+TI+ ++ A+L
Sbjct: 1338 NY---QLNKGQASAIINAKENDGFTLVQGPPGTGKTKTIIAMVGALLTGNIKINKPPPVP 1394
Query: 311 REIKRGPELPMHEKYNHWGRASPWLVGA--NPRDNIMPIDGDDGFFPTTGNELKPEVVNS 368
E PM K LV A N + + + G T G K +N
Sbjct: 1395 VRPGVNGEAPMARKL---------LVCAPSNAAVDELVLRLKAGIKDTNGQMHK---INV 1442
Query: 369 SRRYRVRVLVCAPSNSALDEIV------LRLLNTGIRD--ENIRSYTPKI------VRIG 414
R R + A + LDE+V L N G E + +I +R
Sbjct: 1443 LRLGRSDAVNQAVKDVTLDELVKEKMDALAGQNAGQPSDREKMHQEAGEIKAKMMPLRAA 1502
Query: 415 LKAHHSVNSVAIDHLVEQKRD---------DSAADKQKHGATRKDRDS------IRSAIL 459
L++ N + + ++++ D S D++K R++ I+ +IL
Sbjct: 1503 LESARESNDIGQLNNLQREFDVLKRRQMQLGSMIDREKSSGNTYAREAEVKRRGIQQSIL 1562
Query: 460 NEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQ 519
+A ++C+TLS SG + L F+ VIIDEAAQ VE + L+PL G + LVGDP Q
Sbjct: 1563 ADAHVLCATLSGSGHDMFKTLQVEFETVIIDEAAQCVELSALIPLKYGASKCVLVGDPKQ 1622
Query: 520 LPATVISPVAEHLGYGTSLFKRLQRAGYPVK--MLKTQYRMHPEVRSFPSREFYDEALED 577
LP TV+S A GY SLF R+Q+ +P K +L QYRMHPE+ FPS+EFY+ L D
Sbjct: 1623 LPPTVLSQSAARYGYDQSLFVRMQQ-NHPTKVHLLDCQYRMHPEISLFPSKEFYEGRLAD 1681
Query: 578 GSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMY 637
G D+ + WHE GP+ FFD+ EG + + S +N +EV L +F++ + +
Sbjct: 1682 GDDMAKLRQQPWHENPLLGPYRFFDV-EGIQERGNRGQSLVNTNEVSVALQIFNRFSTDF 1740
Query: 638 PQ----LKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIF 693
LK ++ II+PY+ Q+ ++RF + +G + ++ T D QGRE ++ IF
Sbjct: 1741 SSRCGDLK--GKIGIITPYKAQLHALRQRFLDRYGEAVLEQIEFNTTDAFQGRECEIIIF 1798
Query: 694 SCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQD 750
SCVRAS IGF+ D RRMNVG+TRA+SS+ V+G + L++ W L++ A+ +D
Sbjct: 1799 SCVRASPTGGIGFMTDIRRMNVGLTRARSSLWVLGDSRALKQGPFWAKLIEDAKARD 1855
>gi|84997263|ref|XP_953353.1| tRNA-splicing endonuclease, SEN1 homologue [Theileria annulata
strain Ankara]
gi|65304349|emb|CAI76728.1| tRNA-splicing endonuclease, SEN1 homologue, putative [Theileria
annulata]
Length = 934
Score = 278 bits (710), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 185/553 (33%), Positives = 277/553 (50%), Gaps = 71/553 (12%)
Query: 202 KICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQS--------WKIPGLLHEYI 253
++ SL+TI RE+ L + +P KD +L+ +++ SQD ++IP L + I
Sbjct: 241 RLLSLTTIMREFKGLCMLEHMPLKDYLLTKVPENNNSQDPDTCKELVLDFEIPKKLKKTI 300
Query: 254 KENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHAT-PARVHSKGGLRE 312
+ N+N+ QL A+ L LIQGPPGTGKT TI+ ++S IL++T P + K +RE
Sbjct: 301 EANYNSGQLSALSNSLKNTGISLIQGPPGTGKTTTIMSIISVILYSTIPTK--KKKNVRE 358
Query: 313 IKRGPELPMHEKYNHWGRASPWLV----GANPRDNIMPIDGD--------------DGFF 354
++ H +++ + + W G + + D D F
Sbjct: 359 SQKK-----HLNKSNFRKKNFWFFDEENGVEDKMTFDELQSDENYDYCSITEHNIYDCFN 413
Query: 355 PTTGNELKPEVVNSSRRYRVRVLVCAPSNSALDEIVLRLLNT--GIRDENIRSYTPKIVR 412
T N + S ++ R+L+CAPSN+A+DEIV RL++ GI D N Y P + R
Sbjct: 414 TKTKNNENKIYIGSEKQSNKRILICAPSNAAIDEIVKRLVSPDGGIFDANGNRYNPTVTR 473
Query: 413 IGLKAHHSVNSVAIDHLVEQKRDDSAADKQKHGATRKDRD------SIRSAILNEAVIVC 466
+G + + ++ Q + ++ K + R DR +I IL + +VC
Sbjct: 474 VGPNFNEDLREFSL-----QTKINNWDSKNNLSSLRGDRSNTINKPTIIMDILLNSEVVC 528
Query: 467 STLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVIS 526
STLS GS L L + FD +I+DEA QAVE +TL+P GCK+ LVGDP QL ATV S
Sbjct: 529 STLSGCGSKELYGLINCFDTLIVDEATQAVELSTLIPFNLGCKRAILVGDPCQLSATVCS 588
Query: 527 PVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTT 586
VA L Y SLFKRLQ GYPV LK QYRM P + FPS FY L + +
Sbjct: 589 KVAIQLNYDQSLFKRLQLCGYPVNFLKLQYRMDPLITRFPSMYFYQNQLVNAKETSSVPE 648
Query: 587 RDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQ- 645
DW ++ P FF + + +ES S++N EVD V L ++ ++ + ++
Sbjct: 649 EDWRQFPLLRPTVFFAL-DSQESM--SDTSYVNEMEVDLVCQLLDIIVEIFSAIPGITEE 705
Query: 646 -----LAIISPYRHQVK--------------QFQERFKETFGVESQKVVDITTVDGCQGR 686
+A+ISPY Q + F +K G ++ ++ ++TVDG QG
Sbjct: 706 EICKKIAVISPYAAQAEILKNTISQRIKILPTFSSVYKALTGSKTHQIY-VSTVDGFQGM 764
Query: 687 EKDVAIFSCVRAS 699
EK++ IFS VR +
Sbjct: 765 EKEIIIFSAVRTN 777
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%)
Query: 705 GFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLF 753
F+AD RR+NV ITRA S++ +VG L + KHW+ L K +F
Sbjct: 839 SFIADRRRINVAITRACSNLFIVGNPRYLLDHKHWSALYNHYAKTGSIF 887
>gi|160331663|ref|XP_001712538.1| sen1 [Hemiselmis andersenii]
gi|159765987|gb|ABW98213.1| sen1 [Hemiselmis andersenii]
Length = 738
Score = 275 bits (702), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 192/565 (33%), Positives = 302/565 (53%), Gaps = 43/565 (7%)
Query: 203 ICSLSTIAREYLALRSVGSLPFK-DLILSASEKSSGSQDQSWKIPGLLHEYIKENHNASQ 261
+ SL +I +++ L + +P+ + IL + +KS + + + + N+SQ
Sbjct: 166 LFSLKSIYKDFQVLNNFNQIPWGINKILFSKKKSINENFSLSRKEIFFYSHFTVHFNSSQ 225
Query: 262 LEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLREIKRGPELPM 321
+E I L+ K LIQGPPGTGKT+TILG++ L +R + L++I E +
Sbjct: 226 MEGILSTLINKI-SLIQGPPGTGKTRTILGIIYLNLRKFLSRKNK--FLKKI-LSKEFDL 281
Query: 322 HEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNSSRRYRVRVLVCAP 381
+ G+ S + G R N+ + + + N + +N R R++VCA
Sbjct: 282 LK-----GKLSSFF-GEKRRFNL---NKEKNW----KNLQRFLYMNQKTR---RIIVCAF 325
Query: 382 SNSALDEIVLRLLNTGIRDENIRSYTP--KIVRIG-----LKAHHSVNSVAIDHLVEQKR 434
SN+A DE R+ G+ + I++ +++R+G H +++S A+ E
Sbjct: 326 SNTATDENTARI-TYGLPMQKIKAKFEIFEVLRLGPNYKFFFDHITLDSYALIWASENND 384
Query: 435 DDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQ 494
S D ++ +DS R I+ ++ ++ +TL+ + L+K+ + +IIDEAAQ
Sbjct: 385 SLSIWD-----CSKILKDS-RIQIIKKSKLIYTTLACASYTFLNKVKKK-ETLIIDEAAQ 437
Query: 495 AVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKT 554
A+E +TLVP+ C+ + L+GD QLPAT+ S + L Y SLFKRLQ +P+ L+T
Sbjct: 438 AIELSTLVPVRKTCENLILIGDIQQLPATIFSQSSLDLNYERSLFKRLQLKKFPIYFLET 497
Query: 555 QYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKES-QPAG 613
Q+RMHP++ SF SR+FY L D V+ +++H RCFGP FFD EG ++
Sbjct: 498 QFRMHPQISSFVSRKFYKNGLNDSQMVKK--VQNFHFLRCFGPILFFDASEGLDNFHKKQ 555
Query: 614 SGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQK 673
SW N++E+ + +F LI ++ L S + IIS Y+ QV + QE S+
Sbjct: 556 KNSWCNLEEIRIISFIFRSLICLFTNLNLRS-IGIISSYQGQVSEIQE---NNILKRSEL 611
Query: 674 VVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTL 733
I TVDG QGREK++ IFS VRA +++ IGFL+D RRMNV TRAK S VG AS L
Sbjct: 612 KGQINTVDGFQGREKNIIIFSTVRARNERGIGFLSDCRRMNVAFTRAKFSFWGVGKASVL 671
Query: 734 REDKHWNNLVKSAEKQDCLFRVSKP 758
++D +W + K+ F + KP
Sbjct: 672 KKDTNWFEGLFDFRKRGRFFCIRKP 696
>gi|189198704|ref|XP_001935689.1| DNA-binding protein SMUBP-2 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187982788|gb|EDU48276.1| DNA-binding protein SMUBP-2 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 1954
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 138/318 (43%), Positives = 198/318 (62%), Gaps = 8/318 (2%)
Query: 436 DSAADKQKHGATRKD--RDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAA 493
D+ D Q R D RD +AILN+A +VCSTL+ SG + + FD VI+DEAA
Sbjct: 1463 DAIKDSQASTGRRADSRRDKAIAAILNDAHVVCSTLNGSGHHMFRTIEVEFDTVIVDEAA 1522
Query: 494 QAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYP--VKM 551
Q VE + L+PL GC + LVGDP QLP T+ S A Y SLF R+Q+ +P V +
Sbjct: 1523 QCVEMSALIPLKYGCAKCILVGDPKQLPPTIFSKEAVRFRYAQSLFMRMQQ-NHPNDVHL 1581
Query: 552 LKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQP 611
L QYRMHPE+ FPS+ FYD L DG D+ + WH+ GP+ FFD+ +G++ +
Sbjct: 1582 LDVQYRMHPEISQFPSQTFYDGKLLDGGDMASVRKQPWHQSSLLGPYRFFDV-KGQQQKA 1640
Query: 612 AGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVES 671
S +NI E++ L L+H+L S +P ++ II+PY+ Q+ + +ERFK T+G
Sbjct: 1641 TSGKSLMNIAEINVALQLYHRLTSDFPNYNFKGKIGIITPYKSQLYEIKERFKRTYGQTI 1700
Query: 672 QKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCAS 731
+ +D T D QGRE ++ IFSCVRA+ IGFL D RRMNVG+TRAKSS+ V+G ++
Sbjct: 1701 VEDIDFNTTDAFQGRENEIIIFSCVRANG--GIGFLDDVRRMNVGLTRAKSSLWVLGDST 1758
Query: 732 TLREDKHWNNLVKSAEKQ 749
+L+ ++W L+ +A+++
Sbjct: 1759 SLQSGEYWRKLILNAQER 1776
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 116/282 (41%), Gaps = 38/282 (13%)
Query: 21 ILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKAQI 80
IL WDYF + + +G + V T+ DDY TFE LL E
Sbjct: 1071 ILNWDYFY--------DGHFPPRTSKGDYSM--VISTFHTPDDYQRTFERLLLLEAWQSF 1120
Query: 81 IQKKDEEEVQEWKLRLVMECGEADGFHL--PSVTYEADEVESISPNDLLLLSKEEFKEGS 138
I+ +DE + +++ + D F ++ Y + D++LLS+ K +
Sbjct: 1121 IKMRDEPLAKPYEI-TISSSARVDQFSEVGSTLKYGVSKEMPFYEGDIILLSQS--KPSA 1177
Query: 139 TFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSAVEKRL 198
PT A N+ R + E I + +L V L
Sbjct: 1178 DVPTCLARV------HNIKRTK-----EHFQITYRLIPGSKL--------QKVFQKNNTL 1218
Query: 199 FSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIKENHN 258
+ KI S++++ REY ALR + D I+ A + S +I L+ Y +
Sbjct: 1219 LATKIDSITSLEREYAALRGLQYYDLCDEIIKAKPSPLLTYKDS-QIQPLILNY---DLT 1274
Query: 259 ASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHAT 300
+Q +AI + F LIQGPPGTGKT+TI ++ AIL +
Sbjct: 1275 LAQGKAIKSAIDNDGFTLIQGPPGTGKTRTITAIVGAILSGS 1316
>gi|388851768|emb|CCF54574.1| related to SEN1 protein [Ustilago hordei]
Length = 900
Score = 273 bits (698), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 208/583 (35%), Positives = 304/583 (52%), Gaps = 50/583 (8%)
Query: 202 KICSLSTIAREYLALRSVGSLP-FKDLILS-ASEKSSGSQDQSWKIPGLLHEYIKENHNA 259
K+ SL+T+ REY AL L F D+I + K++ + ++ K + EY N
Sbjct: 201 KLFSLTTLDREYGALMVAPHLDLFSDIIKGRVAPKATLAAEEVRKA---MQEY---QVNE 254
Query: 260 SQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLREIKRGPEL 319
Q AI L + F LIQGPPGTGKT+T + A++ A +R KG ++ G
Sbjct: 255 PQARAILGSLATEGFSLIQGPPGTGKTKT----ICALIGAFVSR--QKGPSTSVQAGQAQ 308
Query: 320 PMHEKYNHWGRASPW-----LVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNSSRR--- 371
+ +P V R +I +DG P + E VN S +
Sbjct: 309 GKVDATKKILLCAPSNAAIDEVAKRARASIRLLDGKV-IHPKVVRVGREEAVNVSVKDIS 367
Query: 372 --YRV-------------RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLK 416
Y V R +V A SAL + L + +N S + R G K
Sbjct: 368 LEYLVEQRLKADGVFDGNRNIVTAADLSALHAEIHHLKMQRKQKQNKLS---QARRSGDK 424
Query: 417 AHHSVNSVAIDHL---VEQKRDDSAA-DKQKHGATRKDRDSIRSAILNEAVIVCSTLSFS 472
A + I +L V+ K D++ K +H R R IL EA ++C+TLS +
Sbjct: 425 ALATQLKAEIRNLSANVKSKFDEAKGKQKSQHRQLEALRRRARLEILGEADVICTTLSGA 484
Query: 473 GSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHL 532
G +LS++ F+ V+IDEAAQAVE +T++PL GCKQ +VGDP QLP TVIS A+ L
Sbjct: 485 GHKMLSRVAFDFETVVIDEAAQAVELSTIIPLRYGCKQCIMVGDPNQLPPTVISQQADKL 544
Query: 533 GYGTSLFKRL-QRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHE 591
GY SLF R+ +RA V +L QYRMHPE+ FP++ FY L+DG D+ + T + WH
Sbjct: 545 GYSQSLFARMFERAPQEVHLLSIQYRMHPEISLFPAKAFYGSKLQDGPDMAESTHQPWHR 604
Query: 592 YRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISP 651
Y PF F + ES P S IN +E + L L+ +L + + Q ++ I++
Sbjct: 605 YELTRPFKFLST-KAPES-PGPFHSIINKEEANVALALYGRLRTDHAQENFDYRIGIVTM 662
Query: 652 YRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDK-KSIGFLADY 710
Y+ QV + ++ F++ +G + + +D TVDG QG+EKD+ I SCVR+ K SIGFL D
Sbjct: 663 YKAQVFELKQTFQQRYGKDIVERIDFNTVDGFQGQEKDIIILSCVRSLPKPSSIGFLRDG 722
Query: 711 RRMNVGITRAKSSILVVGCASTLRE-DKHWNNLVKSAEKQDCL 752
RR+NV +TRAKS++ ++G A LR D W +LV +AE+++ +
Sbjct: 723 RRLNVAVTRAKSNLFIIGNAEHLRRGDAIWESLVAAAEQREAV 765
>gi|393212617|gb|EJC98117.1| hypothetical protein FOMMEDRAFT_97735 [Fomitiporia mediterranea
MF3/22]
Length = 1825
Score = 273 bits (697), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 244/794 (30%), Positives = 363/794 (45%), Gaps = 139/794 (17%)
Query: 19 KIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKA 78
++IL W+Y +D + ++R L V D +K ++Y F PLL E +
Sbjct: 1105 RVILSWNY---------DHDGSDPPMERPPLA--HVPDMFKSHEEYTRIFRPLLMLEAWS 1153
Query: 79 QIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADEVE-SISP-NDLLLLSKEEFKE 136
QI++ K+E + + +++ L V E +SP D++LL K
Sbjct: 1154 QIVKSKEERTPEIFHIKIAARSLMPPWLDLEVVIDAVPGPEWYLSPETDIVLLRHMAGK- 1212
Query: 137 GSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSAVEK 196
P A + R G + + +A+ + L+I S T ++ V
Sbjct: 1213 ----PCIMA-------KVTSFRKTNDEIGCGLRVCTNALNADPGLSIGS--TWRLNLV-- 1257
Query: 197 RLFSLKICSLSTIAREYLALRSVGSLPFKDLILSA--SEKSSGSQDQSWKIPGLLHEYIK 254
L+T+ REY AL ++ D+IL ++ S D+ L +K
Sbjct: 1258 ---------LTTLHREYAALMALPYYDMVDIILQPRLADPVIPSGDE-------LQRTMK 1301
Query: 255 ENH-NASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHA--TPARV------- 304
N Q +AI + K F LIQGPPGTGKT TILGL+ A L + TP ++
Sbjct: 1302 AYRVNEPQAKAIISSMQTKGFSLIQGPPGTGKTWTILGLVGAFLSSRRTPPKLIAIPGKA 1361
Query: 305 ----------------HSKGGLREIK-------RGPELPMHEKYNHWGRASPWLV--GAN 339
S + EI RGP + R SP +V GA+
Sbjct: 1362 PPPAPKPASQKLLICAPSNAAVDEITKRLIEGVRGP---------NGQRLSPKVVRVGAD 1412
Query: 340 PRDNI--------------MPIDGDDGFFPTTGN--ELKPEV--VNSSRRYRVRVLVCAP 381
+ N+ M DG + G+ L+ E+ V +R+ ++ L
Sbjct: 1413 SQINVSAKEVSLDTLVEAKMNSDGGNPHGDGAGDAKNLRAELEQVKEARQKKIEELQSTI 1472
Query: 382 SNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQKRDDSAADK 441
+N++ +++L IR N + RIGL + Q RD +
Sbjct: 1473 NNTSR----IQMLENEIRGLNDK-------RIGLSQK-----------LNQLRDKMKSQN 1510
Query: 442 QKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATL 501
+ A R+ R IL A I+CSTLS +G L + F +VIIDEAAQ++E ++L
Sbjct: 1511 RSIDAIRR---KYRHEILGAADIICSTLSGAGHEQLEPFD--FSMVIIDEAAQSIELSSL 1565
Query: 502 VPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRA-GYPVKMLKTQYRMHP 560
+PL + +VGDP QLP TV+SP A GY SLF RLQ+ V +L QYRMHP
Sbjct: 1566 IPLKYTSTRCVMVGDPQQLPPTVLSPEASKWGYDQSLFVRLQKCRPEAVHLLSIQYRMHP 1625
Query: 561 EVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINI 620
E+ PS+ FY L DG D++ T + WH FG + FF + GKE Q S N
Sbjct: 1626 EISLLPSKVFYGGRLRDGPDMDKKTEQLWHNEPRFGAYKFFSVENGKEEQARIGHSIYNQ 1685
Query: 621 DEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTV 680
E ++ + +L + + ++ I+SPYR QV + ++ F + FG E VD TV
Sbjct: 1686 AECRTIIAAYDRLRKQFSSINFDYRVGIVSPYRSQVLEMRKLFTQRFGAEIVSKVDFNTV 1745
Query: 681 DGCQGREKDVAIFSCVRA-SDKKSIGFLADYRRMNVGITRAKSSILVVGCASTL-REDKH 738
DG QG+EKD+ + SCVRA + ++GFLAD RRMNV ITRA+SS+ + G A TL R ++
Sbjct: 1746 DGFQGQEKDIIMLSCVRAGTSLATVGFLADIRRMNVAITRARSSLFIFGHAPTLQRSNRV 1805
Query: 739 WNNLVKSAEKQDCL 752
W ++V A + C
Sbjct: 1806 WKDIVDDARSRACF 1819
>gi|414886089|tpg|DAA62103.1| TPA: hypothetical protein ZEAMMB73_701312 [Zea mays]
Length = 688
Score = 271 bits (694), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 153/340 (45%), Positives = 205/340 (60%), Gaps = 32/340 (9%)
Query: 454 IRSAILNEAVIVCSTLSFSG-------SALLSKLNHG-------FDVVIIDEAAQAVEPA 499
+R +IL EA I+ +TLS G S S +G FDVVIIDEAAQA+EPA
Sbjct: 18 VRKSILGEAEIIVTTLSGCGGDIYGVCSETASSNKYGTFSEHALFDVVIIDEAAQALEPA 77
Query: 500 TLVPL----ATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQ 555
TL+PL + G K +VGDP QLPATV+S +A Y S+F+RLQRAGYPV ML Q
Sbjct: 78 TLIPLQILKSRGTK-CIMVGDPKQLPATVMSGLASKFLYECSMFERLQRAGYPVIMLTKQ 136
Query: 556 YRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKE--SQPAG 613
YRMHPE+ FPS FY+ L DG +V D + +H + C GP+ FFDI +G+E + A
Sbjct: 137 YRMHPEISRFPSLHFYENKLLDGVEVADKSA-SFHFHECLGPYMFFDIADGREHCGRNAA 195
Query: 614 SGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQK 673
+ S N E D L + L + YP +S ++ II+PYR Q+ + +F +FG E
Sbjct: 196 TQSLCNDFEADAALEILSFLNNRYPLEFTSRKIGIITPYRSQLSILRSKFTSSFGPEIVA 255
Query: 674 VVDITTVDGCQGREKDVAIFSCVRASDK----------KSIGFLADYRRMNVGITRAKSS 723
++I TVDG QGRE D+ + S VRAS+ +SIGF+AD RRMNV +TRA+ S
Sbjct: 256 EMEINTVDGFQGREVDILLLSTVRASNSSDDSHRTGEARSIGFVADVRRMNVALTRARLS 315
Query: 724 ILVVGCASTLREDKHWNNLVKSAEKQDCLFRVSKPYASFF 763
+ +VG A TLR + HWN+LV AE+++ + +PY F
Sbjct: 316 LWIVGNARTLRINSHWNSLVCDAEERNLFVSIKRPYGLMF 355
>gi|302689419|ref|XP_003034389.1| hypothetical protein SCHCODRAFT_52671 [Schizophyllum commune H4-8]
gi|300108084|gb|EFI99486.1| hypothetical protein SCHCODRAFT_52671 [Schizophyllum commune H4-8]
Length = 1958
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 204/585 (34%), Positives = 300/585 (51%), Gaps = 51/585 (8%)
Query: 202 KICSLSTIAREYLALRSVGSLPFKDL---ILSASEKSSGSQDQSWKIPGLLHEYIKENHN 258
K+ SLSTI REY AL V P+ DL IL + +S S S ++ + +Y + N
Sbjct: 1251 KVMSLSTIHREYTALVQV---PYYDLPGNILRPNLDNSPSISAS-EVQRMQEKY---SVN 1303
Query: 259 ASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARV-----HSKGGLREI 313
Q AI + + K F LIQGPPGTGKT TI GL+SA L+ R+ + R +
Sbjct: 1304 EPQAVAITKSIHTKGFSLIQGPPGTGKTSTICGLVSAYLYEANRRITRPMENDPNQPRIL 1363
Query: 314 KRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNSSRRYR 373
P ++ + SP V + N++ I + G+ +K +++ +
Sbjct: 1364 LCAPSNAAIDEVAFRLKCSPAAVAG--KLNVVRIGAEKAI----GDAVKDITLDTLADKK 1417
Query: 374 VRVLVCAPSNSALD-EIVLRLLNTG-------------IRDENIRSYTPKIVRIGLKAHH 419
+ V N + + R LN I D + R+ T LK+
Sbjct: 1418 LNVSTTNTENVEGELSSLFRELNAAKHEINAKQKELAQIVDNSARAQTLSDELRMLKSRR 1477
Query: 420 SVNSVAIDHLVE-QKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLS 478
S +D + E QK + D + A R +L EA +VCSTLS +G L+
Sbjct: 1478 HQVSKQVDQMKEVQKNNRRTMDASRRKARRD--------VLEEAHVVCSTLSGAGHESLN 1529
Query: 479 KLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSL 538
+ F ++IIDEAAQA+E ++L+P C LVGD QLP TVIS A Y SL
Sbjct: 1530 E--SEFQMIIIDEAAQAIELSSLIPFKFSCSHCVLVGDEKQLPPTVISMQATKFRYNQSL 1587
Query: 539 FKRLQR-AGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGP 597
F RLQR + V +L QYRMHP + + PS+ FYD L+DG D+E T + W FG
Sbjct: 1588 FVRLQRQSPNAVNLLSIQYRMHPSISALPSKVFYDSRLKDGPDMEAKTKQPWQFDPKFGA 1647
Query: 598 FSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKS-SSQLAIISPYRHQV 656
+ FF++ G E + AG+ S NI E + + L+ +L++ + ++++ II+ Y+ Q+
Sbjct: 1648 YRFFNVFRGVEDR-AGAKSSKNIAECEVAVALYSRLVTQFGSSGDFAAKVGIIAGYKGQI 1706
Query: 657 KQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRA-SDKKSIGFLADYRRMNV 715
+ + RF+ FG + K + TVDG QG+EKDV IFSCVRA + +IGF++D RRMNV
Sbjct: 1707 VELRRRFENRFGRDITKKIAFNTVDGFQGQEKDVIIFSCVRAGTGTTNIGFMSDTRRMNV 1766
Query: 716 GITRAKSSILVVGCASTL-REDKHWNNLVKSAEKQDCLFRVSKPY 759
+TRAKSS+ ++G A TL R D+ W +V A ++ + V Y
Sbjct: 1767 ALTRAKSSLFILGHADTLSRSDETWKQIVADANERKLMTDVDVSY 1811
>gi|367012806|ref|XP_003680903.1| hypothetical protein TDEL_0D01080 [Torulaspora delbrueckii]
gi|359748563|emb|CCE91692.1| hypothetical protein TDEL_0D01080 [Torulaspora delbrueckii]
Length = 2068
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 143/349 (40%), Positives = 209/349 (59%), Gaps = 9/349 (2%)
Query: 450 DRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCK 509
DR + ++ IL + ++CSTLS + +L+ L FD VI+DEA Q E + ++PL G K
Sbjct: 1510 DRRNAQARILASSNVICSTLSGAAHDVLASLGVKFDTVIVDEACQCTELSAIIPLRYGGK 1569
Query: 510 QVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSRE 569
+ +VGDP QLP TV+S A + GY SLF R+++ P +L QYRMHP + FPS E
Sbjct: 1570 RCIMVGDPNQLPPTVLSGAASNFGYNQSLFVRMEKNSSPY-LLDVQYRMHPAISKFPSAE 1628
Query: 570 FYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLL 629
FY+ L+DG DVE R WH+ P+ FFDI GKESQ A S S++N +E+ + L
Sbjct: 1629 FYNGRLKDGPDVEILNIRPWHKNAPLTPYRFFDIVTGKESQNAKSMSYVNTEEIRVAIEL 1688
Query: 630 FHKLISMYP-QLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREK 688
L++ Y +L S ++ +ISPY+ Q + +F+ FG + VD T+DG QG+EK
Sbjct: 1689 VENLVNKYERELDFSGKIGVISPYKEQAMTMRRQFRSHFGASIAQYVDFNTIDGFQGQEK 1748
Query: 689 DVAIFSCVRASDKK-SIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAE 747
++ I SCVRA D K S+GFL D+RRMNV +TRAK+S+ ++G +L ++K W NL+ A+
Sbjct: 1749 EIIIISCVRADDSKTSVGFLRDFRRMNVALTRAKTSMWILGHQKSLVKNKLWRNLITDAQ 1808
Query: 748 KQDCLFRVSKPYASFFSDENLESMRKNATTDNVQGADGHVPHDDETMHY 796
+ CL + P F + +N + R T + +G+ DDE Y
Sbjct: 1809 GRGCL-EFACP--GFLNKKNHNAQR---TLERFRGSHDGPKMDDEYNPY 1851
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 129/281 (45%), Gaps = 29/281 (10%)
Query: 21 ILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKAQI 80
+L WDY R S +D++ K + VKD++ V++Y PLL E +
Sbjct: 1080 VLQWDYSR---RSDYPDDESPDKYSK-------VKDSFNSVNEYRKVIRPLLLLECWQGL 1129
Query: 81 IQKKDEEEVQEWKLRLVMECGEADGFHL-PSVTYEADEVESISPNDLLLLSKEEFKEGST 139
+D E+ + + + + +D + + S + + I+ +D+++L+ E +
Sbjct: 1130 CSTRDREDFKPFSVIVGNRTAVSDFYEVYASASKTMIQDAGITESDIIVLAYFPGNEQVS 1189
Query: 140 FPTTYAFALVEH-CQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSAVEKRL 198
F H C A + L+ +V ++ R N +T + +
Sbjct: 1190 TMRNEDFKKASHTCLAKVKTLKNTKGNKV----DVTLRIHRKHNFSKFLT-----LRSEI 1240
Query: 199 FSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIKENH- 257
F++K+ ++T+ REY L ++ + IL A+ S D S +++K N+
Sbjct: 1241 FAVKVMQMTTVEREYSTLEALEYYDLVEQILRAAPSQSVEVDSSEV------DFVKSNYK 1294
Query: 258 -NASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAIL 297
N+SQ +AI + ++ F LIQGPPGTGKT+TILG++ L
Sbjct: 1295 LNSSQAKAIVNTVSKEGFSLIQGPPGTGKTKTILGVIGYFL 1335
>gi|119467162|ref|XP_001257387.1| tRNA-splicing endonuclease, putative [Neosartorya fischeri NRRL 181]
gi|119405539|gb|EAW15490.1| tRNA-splicing endonuclease, putative [Neosartorya fischeri NRRL 181]
Length = 2076
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 141/320 (44%), Positives = 200/320 (62%), Gaps = 9/320 (2%)
Query: 436 DSAADKQKHGATRK---DRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEA 492
D+A DK H A R +R I+ I+N A ++C+TLS SG + L+ F+ V+IDEA
Sbjct: 1491 DTARDKN-HSAARDADLNRRRIQQEIINGAHVICATLSGSGHEMFQNLSIEFETVVIDEA 1549
Query: 493 AQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYP--VK 550
AQ++E + L+PL GC + LVGDP QLP TV+S VA Y SLF R+Q A +P V
Sbjct: 1550 AQSIELSALIPLKYGCSKCILVGDPKQLPPTVLSKVASKFQYEQSLFVRMQ-ANHPRDVH 1608
Query: 551 MLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQ 610
+L TQYRMHPE+ +PS FYD L+DG ++ R WH+ GP+ FFD+ +G
Sbjct: 1609 LLDTQYRMHPEISVYPSAAFYDGKLKDGPNMAKLRARPWHQSELLGPYRFFDV-QGLHQN 1667
Query: 611 PAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVE 670
S IN+ E+ + L+ +LIS + S ++ II+PY+ Q+++ + +F +G
Sbjct: 1668 TTKGHSLINLAELRVAMQLYERLISDFRDYDFSGKIGIITPYKGQLRELKTQFAARYGNS 1727
Query: 671 SQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCA 730
+VD T D QGRE +V IFSCVRAS+ K IGFLAD RRMNVG+TRAKSS+ V+G +
Sbjct: 1728 IFNMVDFNTTDAFQGRESEVIIFSCVRASN-KGIGFLADIRRMNVGLTRAKSSLWVLGNS 1786
Query: 731 STLREDKHWNNLVKSAEKQD 750
+L + + WN L+K A +++
Sbjct: 1787 QSLMQGEFWNGLIKDARRRN 1806
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 118/428 (27%), Positives = 184/428 (42%), Gaps = 103/428 (24%)
Query: 19 KIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKA 78
+ IL WD+F + G+ V +T++D +Y TFEPLL E
Sbjct: 1086 RTILAWDFFA----------NGDLPPNSGRTDYSLVSNTFRDPIEYQKTFEPLLILEAWQ 1135
Query: 79 QIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADEVE--SISPNDLLLLSKEEFKE 136
K+E + +++++ D F S + EV+ + D++LLSK
Sbjct: 1136 GFNSTKEEGTFRPFEIKVATRLS-VDSFVEVSTVLPSLEVKDLGLGEADIVLLSK----- 1189
Query: 137 GSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVK-SQRLLNIHSLITSSVSAVE 195
S+ PT+ + A HC A + AG I+ + V+ S R+ S I S V
Sbjct: 1190 -SSRPTSDSSA--PHCFARV-------AG--INKKRGTVEISYRVNPGTSFINSLGPGVT 1237
Query: 196 KRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLH----- 250
++ KI SL+ + REY AL ++ + ++ A K +LH
Sbjct: 1238 --IWGAKITSLTPLEREYGALMALQYYDLCEEVIKA------------KPSPILHYSDAS 1283
Query: 251 -EYIKENHNA--SQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSK 307
+ I +N+N +Q +AI L AF LIQGPPG+GKT+TI+ L+ A+L + V
Sbjct: 1284 LKPIADNYNVNPAQAKAIKSALDNDAFTLIQGPPGSGKTKTIVALVGALL----SNVLGD 1339
Query: 308 GGLREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVN 367
G+ I R PM ANPR +P+ TT +L
Sbjct: 1340 QGV-TISR----PMGV--------------ANPR---VPVRT------TTSKKL------ 1365
Query: 368 SSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVN--SVA 425
LVCAPSN+A+DE+V+R G++ + R ++R+G + N V
Sbjct: 1366 ---------LVCAPSNAAVDELVMR-FKEGVKTIHGRHEKLNVIRLGRSDAINTNVLDVT 1415
Query: 426 IDHLVEQK 433
+D LV +
Sbjct: 1416 LDELVNAR 1423
>gi|238880881|gb|EEQ44519.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 2018
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 160/461 (34%), Positives = 246/461 (53%), Gaps = 71/461 (15%)
Query: 373 RVRVLVCAPSNSALDEIVLRL------------------------LNTGIRDENIRSYTP 408
+ ++L+CAPSN+A+DE+VLRL +N+ +RD +
Sbjct: 1360 KAKILICAPSNAAVDELVLRLRDGVRNSSGEHMPLKVVRLGRSDAINSSVRDLTLEELVD 1419
Query: 409 K---------IVRIGLKAHHSVNSVAIDHL-----------------------VEQKRDD 436
K ++ ++ H+ D L + +KR +
Sbjct: 1420 KELQTKQTEVVIDPNIRLEHTKCINERDELRKRLATESLEEKEITELEEKIRAINKKRSE 1479
Query: 437 SAA--DKQKHGATRKDRD------SIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVI 488
A D+Q+ A+ +R +I++ IL+EA ++CSTLS S L++ L+ FD VI
Sbjct: 1480 LAKKLDEQREKASIANRTKEINRRNIQARILSEAQVLCSTLSGSAHDLVANLSVQFDQVI 1539
Query: 489 IDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYP 548
IDEA Q +E + ++PL GCK+ +VGDP QLP TV+S A Y SLF R+Q+ +P
Sbjct: 1540 IDEACQCLELSAIIPLRYGCKKCIMVGDPNQLPPTVLSQAAASYNYEQSLFVRMQK-NHP 1598
Query: 549 --VKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEG 606
V ML QYRMHP + FPS EFY+ L+DG + + TR WH+ P+ FFDI G
Sbjct: 1599 DSVYMLDVQYRMHPMISKFPSSEFYNSKLKDGDGMLELNTRPWHKDPPLTPYRFFDIL-G 1657
Query: 607 KESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKET 666
K + + S N DE L L KL+ + PQ + S ++ IISPY+ Q+++ +E F
Sbjct: 1658 KHEKNELTRSLFNTDEAIVALQLTDKLMQLLPQDRFSGKIGIISPYKEQIRKIKEVFVRK 1717
Query: 667 FGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILV 726
+G +D TVDG QG+EK++ I SCVRAS ++GFL+D RRMNV +TRAK+++ +
Sbjct: 1718 YGKPILDEIDFNTVDGFQGQEKEIIIMSCVRASATGNVGFLSDVRRMNVALTRAKTTLWI 1777
Query: 727 VGCASTLREDKHWNNLVKSAEKQDCLFRVSKPYASFFSDEN 767
+G +L ++ W L+ A +++C +++ Y F + N
Sbjct: 1778 LGNKDSLSRNEVWKKLLTDAGERNC---ITQAYPGFLNPSN 1815
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 113/260 (43%), Gaps = 46/260 (17%)
Query: 52 REVKDTYKDVDDYLATFEPLLFEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGFHLPSV 111
+E+KDTYKDV DY+ EPLL E + K + + ++L L+ DGF
Sbjct: 1102 QEIKDTYKDVKDYVQVTEPLLMLECWQAMQSAKLTVDEKPFEL-LIGSRTSVDGFFDVFA 1160
Query: 112 TYEADEVE--SISPNDLLLLS--KEEFKEGSTFPTTYAFALVEHCQANL----------- 156
+ E ++ I +DL++L+ E + S C A +
Sbjct: 1161 SMEKTVLQDRKIGDSDLVVLALKDESLQHASDIRRYIKADGTMTCLAKVQDTKYTNSDYC 1220
Query: 157 -LRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSAVEKRLFSLKICSLSTIAREYLA 215
+ LR+Y +G ++ L S++T +K+ + TI RE+ +
Sbjct: 1221 DVVLRVYPSGPMMGA----------LTPKSVVTG-----------MKVMQMVTIEREFSS 1259
Query: 216 LRSVGSLPFKDLILSASEKS--SGSQDQSWKIPGLLHEYIKENHNASQLEAIHEGLLRKA 273
L+ + D I+SA+ ++ + K+ + H N SQ AI +
Sbjct: 1260 LKGLQYYDLADSIISATPNKPIEIEEEDAKKMRKIYHV------NDSQARAIMGTFKSEG 1313
Query: 274 FVLIQGPPGTGKTQTILGLL 293
F LIQGPPGTGKT+TILG++
Sbjct: 1314 FSLIQGPPGTGKTKTILGIV 1333
>gi|70984729|ref|XP_747871.1| tRNA-splicing endonuclease [Aspergillus fumigatus Af293]
gi|66845498|gb|EAL85833.1| tRNA-splicing endonuclease, putative [Aspergillus fumigatus Af293]
Length = 2076
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 140/320 (43%), Positives = 201/320 (62%), Gaps = 9/320 (2%)
Query: 436 DSAADKQKHGATRK---DRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEA 492
D+A DK H A R +R I+ I+N A ++C+TLS SG + L+ F+ V+IDEA
Sbjct: 1491 DTARDKN-HSAARDADLNRRRIQQEIINNAHVICATLSGSGHEMFQNLSIEFETVVIDEA 1549
Query: 493 AQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYP--VK 550
AQ++E + L+PL GC + LVGDP QLP TV+S VA Y SLF R+Q A +P V
Sbjct: 1550 AQSIELSALIPLKYGCSKCILVGDPKQLPPTVLSKVASKFQYEQSLFVRMQ-ANHPKDVH 1608
Query: 551 MLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQ 610
+L TQYRMHPE+ +PS FYD L+DG ++ R WH+ GP+ FFD+ +G
Sbjct: 1609 LLDTQYRMHPEISVYPSAAFYDGKLKDGPNMAKLRARPWHQSELLGPYRFFDV-QGLHQN 1667
Query: 611 PAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVE 670
S IN+ E+ + L+ +LI+ + + S ++ II+PY+ Q+++ + +F +G
Sbjct: 1668 TTKGHSLINLAELRVAMQLYERLITDFREYDFSGKIGIITPYKGQLRELKTQFAARYGNA 1727
Query: 671 SQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCA 730
+VD T D QGRE +V IFSCVRAS+ K IGFLAD RRMNVG+TRAKSS+ V+G +
Sbjct: 1728 IFNMVDFNTTDAFQGRESEVIIFSCVRASN-KGIGFLADIRRMNVGLTRAKSSLWVLGNS 1786
Query: 731 STLREDKHWNNLVKSAEKQD 750
+L + + WN L+K A +++
Sbjct: 1787 QSLVQGEFWNGLIKDARRRN 1806
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 112/431 (25%), Positives = 180/431 (41%), Gaps = 109/431 (25%)
Query: 19 KIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKA 78
+ IL WD+F + G+ V +T+KD +Y TFEPLL E
Sbjct: 1086 RTILAWDFFA----------NGDLPPNSGRTDYSLVSNTFKDPLEYQKTFEPLLILEAWQ 1135
Query: 79 QIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADEVE--SISPNDLLLLSKEEFKE 136
K+E + +++++ D F S + EV+ +S D++LLSK
Sbjct: 1136 GFNSTKEEGTFRPFEIKVATRLS-VDSFVEVSTVLPSLEVKDLGLSEADIVLLSK----- 1189
Query: 137 GSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSAVEK 196
S+ PT+ + A HC A + AG I+ + V+ +N S +S+
Sbjct: 1190 -SSRPTSDSSA--PHCFARV-------AG--INKKRGTVEISYRVNPGSPFINSLGP-GV 1236
Query: 197 RLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLH------ 250
++ KI SL+ + REY AL ++ + ++ A K +LH
Sbjct: 1237 TIWGAKITSLTPLEREYGALMALQYYDLCEEVIKA------------KPSPILHYSDASL 1284
Query: 251 EYIKENHNA--SQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKG 308
+ I +N+N +Q +AI L AF LIQGPPG+GKT+TI+ L+ A+L
Sbjct: 1285 KPIADNYNVNPAQAKAIKSALDNDAFTLIQGPPGSGKTKTIVALVGALL----------- 1333
Query: 309 GLREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFF---PT-TGNELKPE 364
N++ GD G PT N P
Sbjct: 1334 ---------------------------------SNVL---GDQGVTISRPTGVTNPRVPG 1357
Query: 365 VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVN-- 422
+S+ ++LVCAPSN+A+DE+V+R G++ + R ++R+G + N
Sbjct: 1358 RTTTSK----KLLVCAPSNAAVDELVMR-FKEGVKTIHGRHEKLNVIRLGRSDAINTNVL 1412
Query: 423 SVAIDHLVEQK 433
V +D LV +
Sbjct: 1413 DVTLDELVNAR 1423
>gi|159122655|gb|EDP47776.1| tRNA-splicing endonuclease, putative [Aspergillus fumigatus A1163]
Length = 2076
Score = 271 bits (692), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 140/320 (43%), Positives = 201/320 (62%), Gaps = 9/320 (2%)
Query: 436 DSAADKQKHGATRK---DRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEA 492
D+A DK H A R +R I+ I+N A ++C+TLS SG + L+ F+ V+IDEA
Sbjct: 1491 DTARDKN-HSAARDADLNRRRIQQEIINNAHVICATLSGSGHEMFQNLSIEFETVVIDEA 1549
Query: 493 AQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYP--VK 550
AQ++E + L+PL GC + LVGDP QLP TV+S VA Y SLF R+Q A +P V
Sbjct: 1550 AQSIELSALIPLKYGCSKCILVGDPKQLPPTVLSKVASKFQYEQSLFVRMQ-ANHPKDVH 1608
Query: 551 MLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQ 610
+L TQYRMHPE+ +PS FYD L+DG ++ R WH+ GP+ FFD+ +G
Sbjct: 1609 LLDTQYRMHPEISVYPSAAFYDGKLKDGPNMAKLRARPWHQSELLGPYRFFDV-QGLHQN 1667
Query: 611 PAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVE 670
S IN+ E+ + L+ +LI+ + + S ++ II+PY+ Q+++ + +F +G
Sbjct: 1668 TTKGHSLINLAELRVAMQLYERLITDFREYDFSGKIGIITPYKGQLRELKTQFAARYGNA 1727
Query: 671 SQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCA 730
+VD T D QGRE +V IFSCVRAS+ K IGFLAD RRMNVG+TRAKSS+ V+G +
Sbjct: 1728 IFNMVDFNTTDAFQGRESEVIIFSCVRASN-KGIGFLADIRRMNVGLTRAKSSLWVLGNS 1786
Query: 731 STLREDKHWNNLVKSAEKQD 750
+L + + WN L+K A +++
Sbjct: 1787 QSLVQGEFWNGLIKDARRRN 1806
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 112/431 (25%), Positives = 180/431 (41%), Gaps = 109/431 (25%)
Query: 19 KIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKA 78
+ IL WD+F + G+ V +T+KD +Y TFEPLL E
Sbjct: 1086 RTILAWDFFA----------NGDLPPNSGRTDYSLVSNTFKDPLEYQKTFEPLLILEAWQ 1135
Query: 79 QIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADEVE--SISPNDLLLLSKEEFKE 136
K+E + +++++ D F S + EV+ +S D++LLSK
Sbjct: 1136 GFNSTKEEGTFRPFEIKVATRLS-VDSFVEVSTVLPSLEVKDLGLSEADIVLLSK----- 1189
Query: 137 GSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSAVEK 196
S+ PT+ + A HC A + AG I+ + V+ +N S +S+
Sbjct: 1190 -SSRPTSDSSA--PHCFARV-------AG--INKKRGTVEISYRVNPGSPFINSLGP-GV 1236
Query: 197 RLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLH------ 250
++ KI SL+ + REY AL ++ + ++ A K +LH
Sbjct: 1237 TIWGAKITSLTPLEREYGALMALQYYDLCEEVIKA------------KPSPILHYSDASL 1284
Query: 251 EYIKENHNA--SQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKG 308
+ I +N+N +Q +AI L AF LIQGPPG+GKT+TI+ L+ A+L
Sbjct: 1285 KPIADNYNVNPAQAKAIKSALDNDAFTLIQGPPGSGKTKTIVALVGALL----------- 1333
Query: 309 GLREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFF---PT-TGNELKPE 364
N++ GD G PT N P
Sbjct: 1334 ---------------------------------SNVL---GDQGVTISRPTGVTNPRVPG 1357
Query: 365 VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVN-- 422
+S+ ++LVCAPSN+A+DE+V+R G++ + R ++R+G + N
Sbjct: 1358 RTTTSK----KLLVCAPSNAAVDELVMR-FKEGVKTIHGRHEKLNVIRLGRSDAINTNVL 1412
Query: 423 SVAIDHLVEQK 433
V +D LV +
Sbjct: 1413 DVTLDELVNAR 1423
>gi|19112847|ref|NP_596055.1| tRNA-splicing endonuclease positive effector (predicted)
[Schizosaccharomyces pombe 972h-]
gi|74582870|sp|O94387.1|YGSA_SCHPO RecName: Full=Uncharacterized ATP-dependent helicase C29A10.10c
gi|4007798|emb|CAA22438.1| tRNA-splicing endonuclease positive effector (predicted)
[Schizosaccharomyces pombe]
Length = 1944
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 160/443 (36%), Positives = 244/443 (55%), Gaps = 73/443 (16%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAI---DHLVE 431
++L+CAPSN+A+DEI+LR+ G+ D + PK++R+G SV++ + +++
Sbjct: 1333 KILICAPSNAAIDEILLRI-KAGVYDHEGIKFFPKVIRVGFGDSISVHAKEFTLEEQMIK 1391
Query: 432 Q------KRDDSAAD----KQKHGATRKDRDSIR------------SAIL---------- 459
Q K+D A + ++K+ + K RDS+R S+IL
Sbjct: 1392 QMELTNLKKDQEANNSSDTRKKYDSIIKKRDSLREDLEKFRSTGKNSSILEAQLREITKQ 1451
Query: 460 ----------------------------------NEAVIVCSTLSFSGSALLSKLNHGFD 485
EA IVC+TLS SG LL F
Sbjct: 1452 KNMLEQSLDDMRERQRSTNRNLDVLKKQIQNQLLQEADIVCATLSASGHELLLNAGLTFR 1511
Query: 486 VVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRL-QR 544
VIIDEAAQAVE ++++PL GC+ +VGDP QLP TV+S + GY SL+ R+ ++
Sbjct: 1512 TVIIDEAAQAVELSSIIPLKYGCESCVMVGDPNQLPPTVLSKTSAKFGYSQSLYVRMFKQ 1571
Query: 545 AGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIH 604
+L QYRM+PE+ FPS+ FY+ L DG ++ T+R WHE G + FF++H
Sbjct: 1572 HNESACLLSIQYRMNPEISRFPSKFFYNSKLLDGPNMSAVTSRPWHEDPQLGIYRFFNVH 1631
Query: 605 EGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFK 664
G E+ + S S N++E F+LLL+ +LI Y + ++ +++PYR QV+Q + +F+
Sbjct: 1632 -GTEAF-SNSKSLYNVEEASFILLLYERLIQCYLNIDFEGKIGVVTPYRSQVQQLRSQFQ 1689
Query: 665 ETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSI 724
+G K +DI TVDG QG+EKD+ IFSCVR+S IGFL D RR+NV +TRAKSS+
Sbjct: 1690 RKYGSIIFKHLDIHTVDGFQGQEKDIIIFSCVRSSMSGGIGFLQDLRRLNVALTRAKSSL 1749
Query: 725 LVVGCASTLREDKHWNNLVKSAE 747
+VG + L ++ + +L++ A+
Sbjct: 1750 YIVGNSKPLMQEDIFYSLIEDAK 1772
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 126/286 (44%), Gaps = 35/286 (12%)
Query: 17 FCKIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEV 76
F K+ILGW+ +S ++ + K TY D + Y F+P+LF E
Sbjct: 1062 FYKVILGWNPL-----------ADSFSASNVEMQCVQAKFTYNDSNAYEKVFKPMLFHEC 1110
Query: 77 KAQIIQKKDEEEVQEWKLRLVMEC-GEADGF-HLPSVTYEADEVESISPNDLLLLSKEEF 134
AQ+ K EE Q + L++ D F + + EV +S D+ LLSK +
Sbjct: 1111 WAQV--KSAVEEKQYPPIDLILNTRSTVDNFVDIYFTSCSPTEVSFLSDTDICLLSKSQS 1168
Query: 135 KEGSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSAV 194
+ P ++ ++ I K++++ +NI S I A
Sbjct: 1169 SGDTNNPKSFQLCKIQS----------------ISRKKESLELCLRMNIES-IDLQEYAP 1211
Query: 195 EKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIK 254
R + K+ + +T RE+ AL+S+ LP IL A+ S K ++ Y
Sbjct: 1212 NIRFTAQKLFNATTSLREFAALKSLRHLPLSQRILDANVTRLPSNFTDDKKQKIMKSY-- 1269
Query: 255 ENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHAT 300
N Q AI+ + F LIQGPPGTGKT+TILG++ A+L ++
Sbjct: 1270 -GVNEPQAYAIYASSVNDGFTLIQGPPGTGKTKTILGMIGAVLTSS 1314
>gi|384495650|gb|EIE86141.1| hypothetical protein RO3G_10852 [Rhizopus delemar RA 99-880]
Length = 1687
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 238/795 (29%), Positives = 368/795 (46%), Gaps = 148/795 (18%)
Query: 13 SIFRFCKIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLL 72
+I R K IL WD L ++ D+ K + ++ DY TFEPLL
Sbjct: 993 NIDRLFKAILSWD-ISLSRDMPPAMDETIYKC---------IPTKFQTFQDYKNTFEPLL 1042
Query: 73 FEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYE---ADEVESISPNDLLLL 129
E+ +QI Q+ E Q L + G + + + +S +DL+ +
Sbjct: 1043 VTEIWSQI-QRAKESLSQSDVLEQCIVAGRRHTNDFVDIMFNWPMSLVTNYVSVDDLVCI 1101
Query: 130 SKEEFKEGSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITS 189
S GS F + E R R +L +LN S TS
Sbjct: 1102 SNHF---GSVFFNDPSSLTEEGEVTKPWRERAFLG---------------VLNSISPKTS 1143
Query: 190 -SVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPG- 247
S+ L+I SL+T REY AL ++ IL+ + + PG
Sbjct: 1144 WSI---------LRIMSLTTAMREYAALEALEHYELGPEILNPAPTTIAK-------PGA 1187
Query: 248 -LLHEYIKE-NHNASQLEAIHEGLL-RKAFVLIQGPPGTGKTQTILGLLSAILH----AT 300
++ +Y K N N Q EAI + RK F LIQGPPGTGKT+TIL L+ ++L +T
Sbjct: 1188 LIIQQYCKSYNVNEPQAEAIAAAIQKRKGFSLIQGPPGTGKTKTILALIVSLLEQRHKST 1247
Query: 301 PARVHSKGGLREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNE 360
P + + GG + + P A+ + ++ +M T+
Sbjct: 1248 PGQPY--GGSKLLVCAP-----------SNAAVDEITKRLKEGVM----------TSHGL 1284
Query: 361 LKPEVVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLK---A 417
KP VV R+ V N+++ + +L L D N+ S I +IG +
Sbjct: 1285 RKPNVV--------RIGVSDSVNASVKDRILDRLIEAEMDANVGS-DDTITKIGSRLDGI 1335
Query: 418 HHSVNSVAI-----DHLVEQ-------------KRD--------------DSAADKQKHG 445
H+ + ++ I D + Q KR D+ D++ +G
Sbjct: 1336 HNDIRNIQIGMDEVDREITQAGSDIVQMSILRGKRKALAQKLAKARIALRDAHQDQRNYG 1395
Query: 446 ATRK-DRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPL 504
+ R R + A +VC+TLS SG +++ + F+ VI+DEA+Q+VE ++L+PL
Sbjct: 1396 QEMEISRIRARQKVFTNADVVCATLSGSGHDMMTAMGASFETVIVDEASQSVEISSLIPL 1455
Query: 505 ATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRS 564
++ LVGDP QLP TV+S +A ++ QYRMHPE+
Sbjct: 1456 KFDTQRCILVGDPNQLPPTVMSTLATNI----------------------QYRMHPEISD 1493
Query: 565 FPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVD 624
PSR FY L+DGS+++ ++ WH F P+ F+D+ +G+E G S N+ E D
Sbjct: 1494 LPSRLFYQSRLQDGSEMDKISSAVWHALPEFPPYCFYDVRDGQEKMGRGK-SIFNVAEAD 1552
Query: 625 FVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQ 684
+ L L++ P +K +S++ +I+PY+ QV Q + RF++ FG +D TVDG Q
Sbjct: 1553 AAVSLVDLLLTKLPTMKFASKIGVITPYKQQVGQLKARFQKRFGDGIVDAIDFNTVDGFQ 1612
Query: 685 GREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVK 744
G+EK++ IFSCVRA + IGFLAD RRMNVG+TRAK S+ V+G A++L ++W +LV+
Sbjct: 1613 GQEKEIIIFSCVRAGSGRGIGFLADMRRMNVGLTRAKCSLYVLGHANSLSRSEYWGDLVQ 1672
Query: 745 SAEKQDCLFRVSKPY 759
A+K+ + V Y
Sbjct: 1673 DAKKRSLMREVKFKY 1687
>gi|399216046|emb|CCF72734.1| unnamed protein product [Babesia microti strain RI]
Length = 897
Score = 270 bits (690), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 232/830 (27%), Positives = 379/830 (45%), Gaps = 131/830 (15%)
Query: 21 ILGWDYFR-LVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKAQ 79
IL WD+ L +E E D+ K+ + L+ +K ++ DY+ F PL E
Sbjct: 53 ILSWDFESDLTEEYGENEDRIRAKI-KWPFKLQPLKTRFERTSDYIFNFFPLFLIECSQI 111
Query: 80 IIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADEVESIS----PNDLLLLSKEEFK 135
+ + K +E+ ++ + + + + +S+S DL++L +
Sbjct: 112 LFKAKTLNNDEEFTFTVLFANVDKCFLQMTLIADAGNLKQSLSDQFSTGDLVVLKIQHIS 171
Query: 136 EGSTFPTTYAFALVEHCQANLLRLRMYL----AGEVIHINKDAVKSQRLLNIHSLITS-- 189
A ++ ++ +R+ + + + + + N+D + L + + I++
Sbjct: 172 ---------IMAFIKQSFSSSIRIEILIHPAKSNVIAYNNRDLDRFDVLQQLFAPISNKS 222
Query: 190 ----SVSAVEKRLFSLK-ICSLSTIAREYLALRSVGSLPFKDLIL--SASEKSSGSQ--- 239
S S +K LK + S++T+ REY L ++ L +D IL + E S+ S+
Sbjct: 223 NQVNSKSTAQKLTVVLKKVLSITTLMREYKTLCTINKLFLRDWILGLNVEEISNLSEIDM 282
Query: 240 ----DQSWKIPGLLHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSA 295
++ + IP L + +N QL AI + R+ LIQGPPG+GKT TI+ ++S
Sbjct: 283 LALENEFYDIPIELTNTLIRKYNKGQLLAICNSMRRQGITLIQGPPGSGKTTTIIAIISC 342
Query: 296 ILHA-TPARVHSKGGLREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDG-- 352
ILH ++ H+ + + +K+N PW +D I D D
Sbjct: 343 ILHGKNHSKSHTTLAIND----------QKHNTCCDRYPWF----RKDYINWTDQDREAD 388
Query: 353 ---FFPTTGNE-----LKPEVVNSSRRYRV---------------RVLVCAPSNSALDEI 389
F+ + N+ + + S R V RVL+CAPSN+A+DEI
Sbjct: 389 DIIFYENSTNQDENVNIYDCISRSEWRNTVKGKLLTVPSYADPFKRVLICAPSNAAVDEI 448
Query: 390 VLRL-----LNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQKRDDSAADKQKH 444
V RL L+ GI + + + P + R+G H + +++ +E K D + K
Sbjct: 449 VKRLTKSVELDGGIFGADGKRFQPVVTRVGPNIHPDL----LEYSLEVKADKTL--KLNR 502
Query: 445 GATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPL 504
G + + +I+ IL ++ ++C+TLS GS+ LS D +I+DEA Q VE + L+ +
Sbjct: 503 GVNQF-KGTIKQNILLQSQVICATLSVCGSSELSGFAGHLDALIVDEATQGVELSNLIAI 561
Query: 505 A-TGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVR 563
+ K+V LVGDP QLPATV S A LGY SLF+RLQ G+ + +L QYRM E+
Sbjct: 562 SLNSIKRVILVGDPCQLPATVCSRFAIQLGYNQSLFQRLQACGHFINLLDVQYRMCTEIS 621
Query: 564 SFPSREFYDEALEDGSDVEDY-TTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDE 622
FPS FY L+D ++ DW++ P FF I E KE + S+ N E
Sbjct: 622 RFPSETFYHGRLKDCDEIHKIRPLVDWYDLPILRPTVFFSI-ESKEIR--AETSYANEIE 678
Query: 623 VDFVLLLFHKLISM---YPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITT 679
V+ L ++ P K + +I+PY QV + + F + VD++T
Sbjct: 679 VELTCQLIEVILGFAEKIPVHKIVESIGVITPYSAQVALLTDAISKRF--KGLGTVDVST 736
Query: 680 VDGCQGREKDVAIFSCVRA----------------------------------SDKKSIG 705
VDG QGREK++ IFS VR SD+ S
Sbjct: 737 VDGFQGREKEIVIFSAVRTLGHGNVHQAIINGKMQLLSGDRLDGFDIKNLTSFSDRMSET 796
Query: 706 FLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRV 755
F++D RR+NVGITRA++++ ++G L + W L +K D +F V
Sbjct: 797 FISDQRRINVGITRARTNLFIIGNPHYLLDHIFWLKLYYYYKKNDMIFYV 846
>gi|222641848|gb|EEE69980.1| hypothetical protein OsJ_29879 [Oryza sativa Japonica Group]
Length = 2215
Score = 270 bits (689), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 156/375 (41%), Positives = 217/375 (57%), Gaps = 39/375 (10%)
Query: 426 IDHLVEQKRDDSAADKQKHGATRKDRD-------SIRSAILNEAVIVCSTLSFSGSALLS 478
++ L QKR SA H +K D +R +IL EA IV +TLS G + S
Sbjct: 1542 LNFLYAQKRKVSAELATAHAREKKIADENRFLKHKVRKSILGEAEIVVTTLSGCGGDIYS 1601
Query: 479 KLNHG--------------FDVVIIDEAAQAVEPATLVPL----ATGCKQVFLVGDPVQL 520
+ FDVV+IDEAAQA+EPATL+PL + G K + +VGDP QL
Sbjct: 1602 VCSETASANKFVNFSEHALFDVVVIDEAAQALEPATLIPLQLLKSKGTKCI-MVGDPKQL 1660
Query: 521 PATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSD 580
PATV+S +A Y S+F+RLQRAGYPV ML QYRMHPE+ FPS FY+ L DG+
Sbjct: 1661 PATVMSGLASKFLYECSMFERLQRAGYPVIMLTKQYRMHPEISRFPSLHFYENKLLDGAQ 1720
Query: 581 VEDYTTRDWHEYRCFGPFSFFDIHEGKE--SQPAGSGSWINIDEVDFVLLLFHKLISMYP 638
D + +H + C GP+ FFD+ +G+E + A + S N E + L + L + YP
Sbjct: 1721 AADKSA-PFHGHDCLGPYMFFDVADGREQCGKNAATQSLCNQFEAEAALEILGFLKNRYP 1779
Query: 639 QLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRA 698
S ++ II+PYR Q+ + RF FG E ++I TVDG QGRE D+ + S VRA
Sbjct: 1780 SEFSCRKIGIITPYRSQLSLLRSRFNSFFGPEIVAEMEINTVDGFQGREVDILVLSTVRA 1839
Query: 699 SDK----------KSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEK 748
S+ +SIGF+AD RRMNV +TRA+ S+ +VG A TL+ + HW +L+++A++
Sbjct: 1840 SNSSDSRHHTGEARSIGFVADVRRMNVALTRARFSLWIVGNAKTLQTNSHWASLLQNAKE 1899
Query: 749 QDCLFRVSKPYASFF 763
++ V++PY S F
Sbjct: 1900 RNLFISVNRPYRSLF 1914
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 134/453 (29%), Positives = 199/453 (43%), Gaps = 90/453 (19%)
Query: 19 KIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKA 78
K IL DYF +V K KL L+E+ + Y+ F+PL+ EE KA
Sbjct: 1075 KNILEMDYFAVVGLPSSEIIK--------KLALKEIPVCFDSQAQYVEIFQPLVLEEFKA 1126
Query: 79 QIIQKKDEEEVQEWKLRLVMECGEADGFHLPSV-----------TYEADEVESISPNDLL 127
Q+ E ++ M CG + V + + ++ NDL+
Sbjct: 1127 QLQNAYVETPAED------MNCGSISILSVERVDEFLVVRGRPDKNDCLKSKNCMENDLI 1180
Query: 128 LLSKEEFKEGSTFPTTYAFALVEH-----CQANLLRLRMYLAGEVIHINKDAVKSQRLLN 182
LLSK+ S+ + V+ +A +L ++ +L+ E +NK +RLL
Sbjct: 1181 LLSKDPL--NSSGQQVHVLGKVDRRESDKTKALILVIKFFLSNENARLNK----VKRLL- 1233
Query: 183 IHSLITSSVSAVEK-RLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSS---GS 238
VE+ + F +I S++ RE+ AL S+ +P +IL+ S GS
Sbjct: 1234 -----------VERSKWFLNRIMSMTPQVREFSALSSLNDIPVLPVILNPVSCKSIHHGS 1282
Query: 239 QDQSW-KIPGLLHEYIKENHNASQLEAIHEGL----LRKAF--VLIQGPPGTGKTQTILG 291
K+ + + +K ++N SQLEA+ + L+ F LIQGPPGTGKT+TI+
Sbjct: 1283 GKVHLDKLSHPMRKVLKSSYNDSQLEAVSIAIRSTSLKAKFDLSLIQGPPGTGKTRTIVA 1342
Query: 292 LLSAI--LHA--TPARVHSKGGLREIKRGPELPMHEKYNH-WGRASPWLVGANPRDNIMP 346
++SA+ LHA + R S K P L W A+ N +P
Sbjct: 1343 IVSALLSLHAANSSQRNESFASAEFNKPRPRLSQSVAVTRAWQDAALAKQLINDSQREVP 1402
Query: 347 IDGDDGFFPTTGNELKPEVVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSY 406
D R + RVLVCA SN+A+DE+V R L+ G+ D + + Y
Sbjct: 1403 TD---------------------RLSKGRVLVCAQSNAAVDELVSR-LSEGLYDTDGKLY 1440
Query: 407 TPKIVRIG-LKAHHSVNSVA--IDHLVEQKRDD 436
P IVR+G K HS NSV ID LVEQ+ D
Sbjct: 1441 KPYIVRVGNAKTVHS-NSVPFFIDTLVEQRLAD 1472
>gi|302829140|ref|XP_002946137.1| hypothetical protein VOLCADRAFT_115709 [Volvox carteri f.
nagariensis]
gi|300268952|gb|EFJ53132.1| hypothetical protein VOLCADRAFT_115709 [Volvox carteri f.
nagariensis]
Length = 829
Score = 269 bits (688), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 189/545 (34%), Positives = 271/545 (49%), Gaps = 90/545 (16%)
Query: 19 KIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKA 78
KI+L WDYF L + + + L+ V T+ +V +Y + EPLL EE A
Sbjct: 136 KILLSWDYFDLWRRCEGGGGLFEE--------LKTVPQTFTNVKEYQSVMEPLLLEECCA 187
Query: 79 QIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADEVESISPNDLLLLSKEEFKEGS 138
QI++ +E EV +V + F + + +A ES + ND++L+ KE + +
Sbjct: 188 QIMRGVEEGEVMAPHPAVVASHEHREDFLIVRLVLQAGITESYTDNDVVLICKENPEADN 247
Query: 139 TFPTTYAFALVE-HCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSAVEKR 197
+A E H +LR++ YL + R +++ ++
Sbjct: 248 VGTGLHALGFCEAHEGQQVLRIKFYL------VPSSQAGGARGAQRAKAMSAGLTTCSSC 301
Query: 198 LFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIKENH 257
+ L++ ++STI RE+ ALR
Sbjct: 302 WWLLRLGNISTITREWTALR---------------------------------------- 321
Query: 258 NASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLREIKRGP 317
+A + A+ GL VLIQGPPGTGKT+TIL LLS I+H+ KG + +
Sbjct: 322 HAHLMSALQAGLDGTPVVLIQGPPGTGKTRTILNLLSVIMHSA-----HKGSIALMNSVA 376
Query: 318 ELPMHEKYNHWGRASPWLVGANPRDNIMPIDG--------DDGFFPTTGNELKPEVVNSS 369
+ G N RD+I P D DD F P + S
Sbjct: 377 AAGADKAAGSTG---------NCRDDITPYDPVPPGSGVHDDCF--GLLRRAAPHRLGHS 425
Query: 370 RRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHL 429
+ VLVCAPSNSALDEIV+R+L +G+ D++ ++ P +VR+G+++HHSV +V++D +
Sbjct: 426 MGPKAHVLVCAPSNSALDEIVMRILRSGLMDKDGANFAPSLVRVGVRSHHSVAAVSLDTI 485
Query: 430 VEQK-------RDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLN- 481
VE + + A ++RD +R AIL+EA IVCSTLSF+GS++ S+L
Sbjct: 486 VESRLGGGEKGGGKESGVVGGGSAGAQERDRMRVAILDEANIVCSTLSFAGSSVFSRLRW 545
Query: 482 ---HGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSL 538
FDVV+IDEAAQAVEP+TLVP+ GCKQV+LVGDPVQLPATVIS A GY SL
Sbjct: 546 LGCRKFDVVVIDEAAQAVEPSTLVPMVMGCKQVYLVGDPVQLPATVISTRAMEQGYDCSL 605
Query: 539 FKRLQ 543
FKRLQ
Sbjct: 606 FKRLQ 610
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 38/52 (73%), Gaps = 7/52 (13%)
Query: 684 QGREKDVAIFSCVR--ASDKKS-----IGFLADYRRMNVGITRAKSSILVVG 728
QGREKD+ IFS VR A KK IGF+AD RR+NVGITRA+ S++V+G
Sbjct: 610 QGREKDICIFSAVRSPAVSKKGGRRPGIGFVADERRINVGITRARCSLIVIG 661
>gi|255714232|ref|XP_002553398.1| KLTH0D15862p [Lachancea thermotolerans]
gi|238934778|emb|CAR22960.1| KLTH0D15862p [Lachancea thermotolerans CBS 6340]
Length = 2090
Score = 269 bits (688), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 140/344 (40%), Positives = 204/344 (59%), Gaps = 9/344 (2%)
Query: 450 DRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCK 509
DR +S IL E+ ++CSTLS S +++ L FD VI+DEA Q E ++++PL G K
Sbjct: 1528 DRRKAQSRILAESDVICSTLSGSAHDIMASLGVKFDTVIVDEACQCTELSSIIPLRYGAK 1587
Query: 510 QVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSRE 569
+ +VGDP QLP TV+S A + Y SLF R+++ P +L QYRMHP + FPS E
Sbjct: 1588 RCIMVGDPNQLPPTVLSGAASNFKYNQSLFVRMEKQCSP-HLLNVQYRMHPAISKFPSIE 1646
Query: 570 FYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLL 629
FY L DG D+E TR WH GP+ FFDI GK+ Q + S++N +E + L
Sbjct: 1647 FYKGKLTDGPDMETINTRPWHSRPPLGPYKFFDIATGKQEQNKKTMSFVNFEECKVAIEL 1706
Query: 630 FHKLISMYPQ-LKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREK 688
L++ Y + S ++ IISPYR Q++ + F+ FG VD T+DG QG+EK
Sbjct: 1707 VEYLLNSYEKSFDFSGKIGIISPYREQMQTMRREFRRYFGNTIAGYVDFNTIDGFQGQEK 1766
Query: 689 DVAIFSCVRASDKKS-IGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAE 747
++ I SCVRA D KS +GFL D+RRMNV +TRAK+S+ ++G S+L ++K W NL+ A+
Sbjct: 1767 EIIIISCVRADDTKSGVGFLKDFRRMNVALTRAKTSMWILGHHSSLFKNKLWRNLITDAK 1826
Query: 748 KQDCLFRVSKPYASFFSDENLESMRKNATTDNVQGADGHVPHDD 791
++CL + F + +N ++ R + Q + H+ DD
Sbjct: 1827 DRNCL---ELACSGFLNPQNKKAAR---LLKDYQSSHDHIIADD 1864
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 115/451 (25%), Positives = 194/451 (43%), Gaps = 84/451 (18%)
Query: 17 FCKIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEV 76
F + +L W+Y + ND ++KD ++ ++Y +PLL E
Sbjct: 1094 FYRDVLQWNYTNTGEYPSGSNDYR----------YEDIKDAFRSAEEYQRIMKPLLLLEC 1143
Query: 77 KAQIIQKKDEEEVQEWKLRLVMECGEADGFHL-PSVTYEADEVESISPNDLLLLSKEEFK 135
+ +D EE + + + + +D + + SV+ + I+ +DLL+LS
Sbjct: 1144 WQGLCAARDREENKPFSIVVGNRTAVSDFYEVYASVSKRMVQEAGITDSDLLVLSFIPGV 1203
Query: 136 EGSTFPTTYAFALVEH-CQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSAV 194
+ + F E+ C A + L+ G+ + + +S R S +
Sbjct: 1204 RSAGDLRSDDFKTAENTCLAKVWGLKNN-KGDNMDLTLRIDRSHRF--------SRFLTL 1254
Query: 195 EKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIK 254
+F++K+ ++T+ REY +L VG LPF DL+ + SG + E +K
Sbjct: 1255 RAEIFAVKVMQMTTVEREYTSL--VG-LPFYDLV---GQIVSGKPTPHHPVNSGQIEDVK 1308
Query: 255 ENH--NASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLRE 312
+ N SQ EAI + + F LIQGPPGTGKT+TILG++ L A
Sbjct: 1309 AKYKLNNSQAEAIVSTVSCEGFSLIQGPPGTGKTKTILGIVGYTLSTQKA---------- 1358
Query: 313 IKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNSSRR- 371
LP P ++ P+D V +S+ +
Sbjct: 1359 ------LP------------PGVIK-------QPLDA---------------VASSTEQL 1378
Query: 372 -YRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLV 430
+ +VL+CAPSN+A+DE+VLR L G+ D++ R + PK+VRIG +VN+ D +
Sbjct: 1379 LLKQKVLICAPSNAAVDELVLR-LKLGVFDKSGRLFQPKLVRIG--RPDAVNAAIRDLTL 1435
Query: 431 EQKRDDSAADKQKHGATRKDRDSIRSAILNE 461
E++ + K A+ D + A + E
Sbjct: 1436 EEQVEKRLNGKNYEFASNPDLEKNLQAAIGE 1466
>gi|343429606|emb|CBQ73179.1| related to SEN1 protein [Sporisorium reilianum SRZ2]
Length = 2239
Score = 268 bits (686), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 142/322 (44%), Positives = 202/322 (62%), Gaps = 7/322 (2%)
Query: 436 DSAADKQK--HGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAA 493
D A DKQ+ H DR R IL +A ++C+TLS +G +LS + F+ V+IDEAA
Sbjct: 1672 DEAKDKQQSQHRQREADRRRARLEILGDADVICTTLSGAGHEMLSGVAFDFETVVIDEAA 1731
Query: 494 QAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRL-QRAGYPVKML 552
QAVE +T++PL GCKQ +VGDP QLP TVIS AE LGY SLF R+ +R+ V +L
Sbjct: 1732 QAVELSTIIPLRYGCKQCIMVGDPNQLPPTVISQEAEKLGYSQSLFVRMFERSPQAVHLL 1791
Query: 553 KTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPA 612
QYRMHPE+ FPS+ FYD L+DG ++ + T + WH+Y PF F + ES P
Sbjct: 1792 SIQYRMHPEISVFPSKAFYDSKLQDGPNMAELTRQPWHKYELMRPFKFLST-KAPES-PG 1849
Query: 613 GSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQ 672
S IN +E + L L+ +L + P ++ +++ Y+ QV + + F++ +G++
Sbjct: 1850 RMHSIINKEEANVALALYERLRTDNPSENFDYRIGVVTMYKAQVFELKRTFQQRYGLDIA 1909
Query: 673 KVVDITTVDGCQGREKDVAIFSCVR-ASDKKSIGFLADYRRMNVGITRAKSSILVVGCAS 731
+D TVDG QG+EKD+ I SCVR A++ +SIGFL+D RR+NV +TRAKS++ V+G A
Sbjct: 1910 DRIDFNTVDGFQGQEKDIIILSCVRSAAEPRSIGFLSDRRRLNVAVTRAKSNLFVIGNAE 1969
Query: 732 TLRE-DKHWNNLVKSAEKQDCL 752
LR D W LV +AE+Q +
Sbjct: 1970 HLRRGDPIWERLVATAEQQGSI 1991
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 119/466 (25%), Positives = 186/466 (39%), Gaps = 107/466 (22%)
Query: 8 PQDEASIFRFCKIILGWDYFRLVKESQERNDKNSKKVDRGK-LGLREVKDTYKDVDDYLA 66
P D +++ R IL WDY +D + GK R ++ + + DY +
Sbjct: 1251 PPDFSALHRS---ILTWDYA---------HDSSRPPALVGKDPEYRRIQPHFTNATDYGS 1298
Query: 67 TFEPLLFEEVKAQIIQKKDEEEVQEWKLRLVMECGEA--DGFHLPSVTYEAD---EVESI 121
F PLL E AQ Q K+E E + G + D F +VT D E
Sbjct: 1299 VFGPLLLLECWAQFRQAKEEAESSNAHSFPLEVAGRSTVDTFVDVNVTIPPDVLPPTEFF 1358
Query: 122 SPNDLLLLSKEEFKEGSTFPTTYAFALVE----HCQANLLRLRMYLAGEVIHINKDAVKS 177
+ +++ L KE S A VE H Q + L LR L S
Sbjct: 1359 NDTEIVRL-KERVPAISGKQPKIVLAKVEAFKRHPQGHQLTLRCCL-------------S 1404
Query: 178 QRLLNIHSLITSSVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSG 237
Q + + + + K+LFSL +T+ RE+ AL + P+ DL S+ G
Sbjct: 1405 QDRQGVSTALVNRSKWELKKLFSL-----TTLHREFAALMAA---PYYDLF---SDIIRG 1453
Query: 238 SQDQSWKIPGLLHEYIKENH--NASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSA 295
+ G + + N Q AI L + F LIQGPPGTGKT+TI L+
Sbjct: 1454 RLAPKVTLTGDEVRKAMQGYQVNEPQARAILGSLATEGFSLIQGPPGTGKTKTICALI-- 1511
Query: 296 ILHATPARVHSKGGLREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFP 355
G ++GP + + G+A L GA +
Sbjct: 1512 ------------GAFVSNRKGPSMSVQA-----GQAQGKL-GATKK-------------- 1539
Query: 356 TTGNELKPEVVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGL 415
+L+CAPSN+A+DE+ R GIR + ++ PK+VR+G
Sbjct: 1540 --------------------ILLCAPSNAAIDEVAKR-ARAGIRLADGKTIHPKVVRVGR 1578
Query: 416 --KAHHSVNSVAIDHLVEQKRD-DSAADKQKHGATRKDRDSIRSAI 458
+ SV +++++L++Q+ + SA D ++G D ++ + I
Sbjct: 1579 DETINVSVKDISLENLIDQRLEGGSAFDSNRNGGATADPSALHAEI 1624
>gi|71029418|ref|XP_764352.1| hypothetical protein [Theileria parva strain Muguga]
gi|68351306|gb|EAN32069.1| hypothetical protein, conserved [Theileria parva]
Length = 944
Score = 267 bits (683), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 181/543 (33%), Positives = 269/543 (49%), Gaps = 50/543 (9%)
Query: 202 KICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQS--------WKIPGLLHEYI 253
K+ SL+TI RE+ L + +P K+ +L+ ++ SQD ++IP L + I
Sbjct: 241 KLISLTTIMREFKGLCMLEHMPLKEYLLTKVPENKDSQDPDTCKELVLDFEIPKQLKKTI 300
Query: 254 KENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLREI 313
+ N+N+ QL A+ L LIQGPPGTGKT TI+G++S IL+++ K
Sbjct: 301 ESNYNSGQLSALSNSLKNTGISLIQGPPGTGKTTTIMGIVSVILYSSLPSNKKKNIKESQ 360
Query: 314 KRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEV-------- 365
KR K N W V + + D + + T + +
Sbjct: 361 KRLVTKSNFRKKNFWFFGDENDVEDKITFDELQSDENYDYCSITDHNIFDCFNKKNSKNN 420
Query: 366 -----VNSSRRYRVRVLVCAPSNSALDEIVLRLLNT--GIRDENIRSYTPKIVRIGLKAH 418
+ S ++ R+L+CAPSN+A+DEIV RL++ GI D N Y P + R+G +
Sbjct: 421 ENKIHIGSEKQSNKRILICAPSNAAIDEIVKRLVSPDGGIFDANGNRYNPTVTRVGPNFN 480
Query: 419 HSVNSVAIDHLVEQ--KRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSAL 476
+ ++ V+ +++ + + T K I +LN V VCSTLS GS
Sbjct: 481 EDLREYSLQTKVKNWDSKNNLSTIRGDRSNTIKKPTIIMDILLNSEV-VCSTLSGCGSKE 539
Query: 477 LSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGT 536
L L + FD +I+DEA QAVE +TL+P GCK+ LVGDP QL ATV S VA L Y
Sbjct: 540 LHGLLNCFDTLIVDEATQAVELSTLIPFNLGCKRAILVGDPCQLSATVCSKVAIQLNYDQ 599
Query: 537 SLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFG 596
SLFKRLQ GYPV LK QYRM P + FPS FY L + + DW ++
Sbjct: 600 SLFKRLQLCGYPVNFLKLQYRMDPLITRFPSMYFYQNQLINAKETTSAPEEDWRQFPLLR 659
Query: 597 PFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKS------SSQLAIIS 650
P FF + + +ES S++N EVD V L ++ ++ + S ++A+IS
Sbjct: 660 PTVFFAL-DSQESM--SDTSYVNEMEVDLVCQLLDIIVEIFSSIPGITEEEISKKIAVIS 716
Query: 651 PYRHQVKQFQE--------------RFKETFGVESQKVVDITTVDGCQGREKDVAIFSCV 696
PY Q + + +F+ G ++ ++ ++TVDG QG EK++ IFS V
Sbjct: 717 PYAAQAEILKNTISQRIKILPTLASQFRALAGAKTHQIY-VSTVDGFQGMEKEIIIFSAV 775
Query: 697 RAS 699
R +
Sbjct: 776 RTN 778
>gi|125564230|gb|EAZ09610.1| hypothetical protein OsI_31894 [Oryza sativa Indica Group]
Length = 2181
Score = 267 bits (683), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 154/375 (41%), Positives = 216/375 (57%), Gaps = 39/375 (10%)
Query: 426 IDHLVEQKRDDSAADKQKHGATRKDRD-------SIRSAILNEAVIVCSTLSFSGSALLS 478
++ L QKR SA H ++ D +R +IL EA IV +TLS G + S
Sbjct: 1471 LNFLYAQKRKVSAELATAHAREKRIADENRFLKHKVRKSILGEAEIVVTTLSGCGGDIYS 1530
Query: 479 KLNHG--------------FDVVIIDEAAQAVEPATLVPL----ATGCKQVFLVGDPVQL 520
+ FDVV+IDEAAQA+EPATL+PL + G K + +VGDP QL
Sbjct: 1531 VCSETASASKFANFSEHALFDVVVIDEAAQALEPATLIPLQLLKSKGTKCI-MVGDPKQL 1589
Query: 521 PATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSD 580
PATV+S +A Y S+F+RLQRAGYPV ML QYRMHPE+ FPS FY+ L DG+
Sbjct: 1590 PATVMSGLASKFLYECSMFERLQRAGYPVIMLTKQYRMHPEISRFPSLHFYENKLLDGAQ 1649
Query: 581 VEDYTTRDWHEYRCFGPFSFFDIHEGKES--QPAGSGSWINIDEVDFVLLLFHKLISMYP 638
D + +H + C GP+ FFD+ +G+E + A + S N E + L + L + YP
Sbjct: 1650 AADKSA-PFHGHDCLGPYMFFDVADGREQCGKNAATQSLCNQFEAEAALEILGFLKNRYP 1708
Query: 639 QLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRA 698
S ++ II+PYR Q+ + RF FG E ++I TVDG QGRE D+ + S VRA
Sbjct: 1709 SEFSCMKIGIITPYRSQLSLLRSRFNSFFGPEIVAEMEINTVDGFQGREVDILVLSTVRA 1768
Query: 699 SDK----------KSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEK 748
S+ + IGF+AD RRMNV +TRA+ S+ +VG A TL+ + HW +L+++A++
Sbjct: 1769 SNSSDSRHHTGEARGIGFVADVRRMNVALTRARFSLWIVGNAKTLQTNSHWASLLQNAKE 1828
Query: 749 QDCLFRVSKPYASFF 763
++ V++PY S F
Sbjct: 1829 RNLFISVNRPYRSLF 1843
Score = 106 bits (264), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 135/453 (29%), Positives = 200/453 (44%), Gaps = 90/453 (19%)
Query: 19 KIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKA 78
K IL DYF +V K KL L+E+ + Y+ F+PL+ EE KA
Sbjct: 1004 KNILEMDYFAVVGLPSSEIIK--------KLALKEIPVCFDSQAQYVEIFQPLVLEEFKA 1055
Query: 79 QIIQKKDEEEVQEWKLRLVMECGEADGFHLPSV-----------TYEADEVESISPNDLL 127
Q+ E ++ M CG + V + + ++ NDL+
Sbjct: 1056 QLQNAYVETPAED------MNCGSISILSVERVDEFLVVRGRPDKNDCLKSKNCMENDLI 1109
Query: 128 LLSKEEFKEGSTFPTTYAFALVEH-----CQANLLRLRMYLAGEVIHINKDAVKSQRLLN 182
LLSK+ S+ + V+ +A +L ++ +L+ E +NK +RLL
Sbjct: 1110 LLSKDPL--NSSGQQVHVLGKVDRRESDKSKALILVIKFFLSNENARLNK----VKRLL- 1162
Query: 183 IHSLITSSVSAVEK-RLFSLKICSLSTIAREYLALRSVGSLPFKDLILS-ASEKSSGSQD 240
VE+ + F +I S++ RE+ AL S+ +P +IL+ S KS +
Sbjct: 1163 -----------VERSKWFLNRIMSMTPQVREFSALSSLNDIPVLPVILNPVSCKSIHNGS 1211
Query: 241 QSWKIPGLLH---EYIKENHNASQLEAIHEGL----LRKAF--VLIQGPPGTGKTQTILG 291
+ L H + +K ++N SQLEA+ + L+ F LIQGPPGTGKT+TI+
Sbjct: 1212 GKVHLDKLSHPMRKVLKSSYNDSQLEAVSIAIRSTSLKAKFDLSLIQGPPGTGKTRTIVA 1271
Query: 292 LLSAI--LHA--TPARVHSKGGLREIKRGPELPMHEKYNH-WGRASPWLVGANPRDNIMP 346
++SA+ LHA + R S K P L W A+ N +P
Sbjct: 1272 IVSALLSLHAANSSQRNESFASAEFNKPRPRLSQSVAVTRAWQDAALAKQLINDSQREVP 1331
Query: 347 IDGDDGFFPTTGNELKPEVVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSY 406
D R + RVLVCA SN+A+DE+V R L+ G+ D + + Y
Sbjct: 1332 TD---------------------RLSKGRVLVCAQSNAAVDELVSR-LSEGLYDTDGKLY 1369
Query: 407 TPKIVRIG-LKAHHSVNSVA--IDHLVEQKRDD 436
P IVR+G K HS NSV ID LVEQ+ D
Sbjct: 1370 KPYIVRVGNAKTVHS-NSVPFFIDTLVEQRLAD 1401
>gi|134117856|ref|XP_772309.1| hypothetical protein CNBL1770 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50254922|gb|EAL17662.1| hypothetical protein CNBL1770 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 2245
Score = 266 bits (680), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 208/621 (33%), Positives = 296/621 (47%), Gaps = 149/621 (23%)
Query: 202 KICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIKENH---- 257
K SLST RE+ AL+ LP+ + +S S +S +P L E I++
Sbjct: 1440 KHVSLSTSIREFAALKG---LPWYE----SSLLSDILAGRSAVMPKLSTERIEDTMKCLS 1492
Query: 258 -NASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLREIKRG 316
N Q +A+ L K F LIQGPPGTGKT+TI G
Sbjct: 1493 LNEPQAKAVLGALEVKGFALIQGPPGTGKTKTISG------------------------- 1527
Query: 317 PELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNSSRRYRVRV 376
LVG + +PI D +P V + ++
Sbjct: 1528 ------------------LVGKWMSERRVPISVDG----------QPPV-------KPKL 1552
Query: 377 LVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKA--HHSVNSVAIDHLVEQKR 434
LVCAPSN+A+DE+ RL+ G+ + + Y P IVR+G+ A + +V V++D LVE
Sbjct: 1553 LVCAPSNAAIDEVCKRLI-LGVPNPDGGQYNPNIVRVGIDASVNIAVKDVSLDSLVEALI 1611
Query: 435 DDSAA----------------------DKQK-------------------HG-------- 445
+S+ DKQ+ H
Sbjct: 1612 SNSSGRNVGGEYGRIQAELDDVKQQIKDKQEAIKLAQDHDEKRKVLEDEYHALITRRTQL 1671
Query: 446 --ATRKDRDSIRSA--------------ILNEAVIVCSTLSFSGSALLSKLNHGFDVVII 489
A+ K +D+ R A IL +A I+C+TLS +G L+ H F+ VII
Sbjct: 1672 GQASSKAKDAARDATRHLDGARRAARDQILKDADIICATLSGAGHDTLAA--HTFETVII 1729
Query: 490 DEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRL-QRAGYP 548
DEAAQA+E + L+PL GCK+ +VGDP QLP T S AE L Y SLF R+ +R
Sbjct: 1730 DEAAQAIEMSCLIPLKYGCKRCIMVGDPNQLPPTTFSTNAEKLQYNKSLFVRMTKRDASH 1789
Query: 549 VKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKE 608
V++L QYRMHP + PS+ FY L+DG + T WH+ FGP+ FF++ EG E
Sbjct: 1790 VQLLSIQYRMHPFISELPSKVFYHGQLKDGPSMAKKTAAIWHQRNIFGPYRFFNV-EGTE 1848
Query: 609 SQPAGSGSWINIDEVDFVLLLFHKLISMY-PQLKSSSQLAIISPYRHQVKQFQERFKETF 667
+ S N E + L+ +L + + ++ + ++ +IS YR Q+ + + +F E F
Sbjct: 1849 MKTGTSTK--NPAEALAAVELYRRLSADFGTRVNLAMRVGVISMYREQLWELKRKFTEAF 1906
Query: 668 GVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKS-IGFLADYRRMNVGITRAKSSILV 726
G ++V+ TVDG QG+EKD+ I SCVR+ S IGFL D RRMNV +TRAKSS+ +
Sbjct: 1907 GSAILELVEFNTVDGFQGQEKDIIILSCVRSGPNLSHIGFLKDTRRMNVALTRAKSSLFI 1966
Query: 727 VGCASTL-REDKHWNNLVKSA 746
G TL R D+ W +V+ A
Sbjct: 1967 FGNGPTLERSDERWKIIVQDA 1987
>gi|71016830|ref|XP_758928.1| hypothetical protein UM02781.1 [Ustilago maydis 521]
gi|46098459|gb|EAK83692.1| hypothetical protein UM02781.1 [Ustilago maydis 521]
Length = 3036
Score = 266 bits (680), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 141/319 (44%), Positives = 203/319 (63%), Gaps = 7/319 (2%)
Query: 436 DSAADKQK--HGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAA 493
D A DKQ+ H DR R IL +A ++C+TLS +G +LS ++ F+ V+IDEAA
Sbjct: 1669 DEAKDKQQSQHRQREADRRRARLEILGDADVICTTLSGAGHEMLSGVSFDFETVVIDEAA 1728
Query: 494 QAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRL-QRAGYPVKML 552
QAVE +T++PL GCKQ +VGDP QLP TVIS AE LGY SLF R+ +R+ V +L
Sbjct: 1729 QAVELSTIIPLRYGCKQCIMVGDPNQLPPTVISQEAEKLGYSQSLFVRMFERSPQAVHLL 1788
Query: 553 KTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPA 612
QYRMHPE+ FPS+ FYD L+DG ++ T + WH++ PF F I + ES P
Sbjct: 1789 SIQYRMHPEISVFPSKAFYDSKLQDGPNMAQLTRQPWHKFELTRPFKFLSI-KAPES-PG 1846
Query: 613 GSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQ 672
S IN +E + L L+ +L P ++ +++ Y+ QV + + F++ +G++
Sbjct: 1847 RMHSIINREEANVALALYERLRIDNPSENFDYRIGVVTMYKAQVFELKRTFQQRYGLDIV 1906
Query: 673 KVVDITTVDGCQGREKDVAIFSCVR-ASDKKSIGFLADYRRMNVGITRAKSSILVVGCAS 731
+ +D TVDG QG+EKD+ I SCVR A++ +SIGFL+D RR+NV +TRAKS++ ++G A
Sbjct: 1907 ERIDFNTVDGFQGQEKDIIILSCVRSAAEPRSIGFLSDQRRLNVAVTRAKSNLFIIGNAE 1966
Query: 732 TLRE-DKHWNNLVKSAEKQ 749
LR D W+ LV +AE+Q
Sbjct: 1967 HLRRGDPIWDRLVTTAEQQ 1985
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 124/466 (26%), Positives = 189/466 (40%), Gaps = 107/466 (22%)
Query: 8 PQDEASIFRFCKIILGWDYFRLVKESQERNDKNSKKVDRGK-LGLREVKDTYKDVDDYLA 66
P D +++ R IL WDY +D N GK R ++ + + +DY +
Sbjct: 1248 PPDFSALHRS---ILTWDY---------THDANRPPALAGKDPEYRRIQPNFGNANDYGS 1295
Query: 67 TFEPLLFEEVKAQIIQKKDEEEVQEWKLRLVMECGEA--DGFHLPSVTYEAD---EVESI 121
PLL E AQ Q K+E E G + D F +VT D E
Sbjct: 1296 VLGPLLLLECWAQFRQAKEEAETSNAPSIPFEVAGRSTVDAFVDVNVTISPDVLPPTEFF 1355
Query: 122 SPNDLLLLSKEEFKEGSTFPTTYAFALVE----HCQANLLRLRMYLAGEVIHINKDAVKS 177
+ +++ L KE S A VE H Q + L LR L S
Sbjct: 1356 NDTEIVRL-KERSPAISEKEPKIILAKVEAFKRHPQGHQLTLRCCL-------------S 1401
Query: 178 QRLLNIHSLITSSVSAVEKRLFSLKICSLSTIAREYLALRSVGSLP-FKDLILS-ASEKS 235
Q + + + + K+LF SL+T+ RE+ AL + F D+I + K+
Sbjct: 1402 QDRQGVSTALVNRSKWELKKLF-----SLTTLHREFAALMAAPYFDLFADIIRGRIAPKA 1456
Query: 236 SGSQDQSWKIPGLLHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSA 295
+ + DQ K + Y N Q AI L + F LIQGPPGTGKT+TI L+ A
Sbjct: 1457 TLTSDQVKKA---MQGY---QVNEPQARAILGSLATEGFSLIQGPPGTGKTKTICALIGA 1510
Query: 296 ILHATPARVHSKGGLREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFP 355
+ + ++GP + N G+ +GA
Sbjct: 1511 FVSS--------------RKGPTTSIQAGQNQ-GK-----LGATK--------------- 1535
Query: 356 TTGNELKPEVVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGL 415
++L+CAPSN+A+DE+ R GIR + + PKIVR+G
Sbjct: 1536 -------------------KILLCAPSNAAIDEVAKR-ARAGIRLADGKVIHPKIVRMGR 1575
Query: 416 --KAHHSVNSVAIDHLVEQKRDDSAA-DKQKHGATRKDRDSIRSAI 458
+ SV +A+++L++Q+ + S A D ++G T D ++ S I
Sbjct: 1576 DDTMNVSVKDIALEYLIDQRLEGSGAFDNHRNGGTTADPSALHSEI 1621
>gi|164429654|ref|XP_964658.2| hypothetical protein NCU02036 [Neurospora crassa OR74A]
gi|157073565|gb|EAA35422.2| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 682
Score = 265 bits (677), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 177/532 (33%), Positives = 264/532 (49%), Gaps = 54/532 (10%)
Query: 256 NHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILG----LLSAILHATPARVH-SKGGL 310
N N Q +AI F LIQGPPGTGKT+TI+ LL+ +L A V + GL
Sbjct: 5 NLNPGQAKAILNAKENDGFTLIQGPPGTGKTKTIVAMVGCLLTGVLKNPTAGVAIGRPGL 64
Query: 311 REIKRGPELPMHEKYNHWGRASPWLVGA--NPRDNIMPIDGDDGFFPTTGNELKPEVVNS 368
K A LV A N + + + +G G + EVV
Sbjct: 65 GAAKNNAP------------AKKLLVCAPSNAAVDELVLRLKNGVKTQNGTTHQIEVV-- 110
Query: 369 SRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKI-------------VRIGL 415
R R + A + LDE+V L + + + K+ +R L
Sbjct: 111 -RLGRSDAINSAVKDVTLDELVKAKLEAQLNKDEGPTDREKLHQEAGEIKQKIAELRPQL 169
Query: 416 KAHHSVNSVAIDHLVEQKRDDSAADKQKHGATRKDRD----------------SIRSAIL 459
+A +++ + + Q+ D +Q H R D D ++ IL
Sbjct: 170 EAARTIDDRQLVNKY-QREFDELKRRQAHIGARIDADKASGNTFARETEIKRRQVQQEIL 228
Query: 460 NEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQ 519
++A ++C+TLS SG + LN F+ VIIDEAAQ VE + L+PL GC + LVGDP Q
Sbjct: 229 DKAQVLCATLSGSGHEMFKNLNVEFETVIIDEAAQCVELSALIPLKYGCSKCILVGDPKQ 288
Query: 520 LPATVISPVAEHLGYGTSLFKRLQRAGYP-VKMLKTQYRMHPEVRSFPSREFYDEALEDG 578
LP TV+S A GY SLF R+Q+ V +L TQYRMHPE+ SFP FY+ L+DG
Sbjct: 289 LPPTVLSQSAARYGYDQSLFVRMQKNHEKDVHLLDTQYRMHPEISSFPRAAFYEGLLQDG 348
Query: 579 SDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYP 638
D+ + WH GP+ FFD+ +E P S +N +E+ + L+ + + Y
Sbjct: 349 DDMAKSRLQPWHRSTLLGPYRFFDVRGSQERGPKNQ-SLVNEEELKVAMQLYRRFKADYG 407
Query: 639 QLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRA 698
+ ++ II+PY+ Q+ + + +F + FG ++ T D QGRE ++ IFSCVRA
Sbjct: 408 NVDLKGKIGIITPYKAQLYRLRSQFAQRFGDAITDEIEFNTTDAFQGRECEIIIFSCVRA 467
Query: 699 SDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQD 750
S IGF+ D RRMNVG+TRA+SS+ ++G + L + + W L++ ++++D
Sbjct: 468 SPTGGIGFMTDIRRMNVGLTRARSSLWILGDSRALMQGEFWAKLIEDSKRRD 519
>gi|449465617|ref|XP_004150524.1| PREDICTED: uncharacterized ATP-dependent helicase C29A10.10c-like
[Cucumis sativus]
Length = 1363
Score = 265 bits (676), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 145/343 (42%), Positives = 201/343 (58%), Gaps = 9/343 (2%)
Query: 451 RDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQ 510
R S+ ++ NEA IV +T+S SG L S+L+HGFD+V+IDEAAQA E A L PL+ G +
Sbjct: 947 RASLEASFANEAEIVFTTVSSSGRKLFSRLSHGFDMVVIDEAAQASEVAVLPPLSLGAAR 1006
Query: 511 VFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREF 570
LVGDP QLPATVIS A L Y SLF+R Q+AG P +L QYRMHP++R FPSR F
Sbjct: 1007 CVLVGDPQQLPATVISKAAGTLLYSRSLFERFQQAGCPTMLLSVQYRMHPQIRDFPSRYF 1066
Query: 571 YDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
Y L D V + +++ P++FFDI G+ES GS S+ NI E F L ++
Sbjct: 1067 YQGRLTDSESVANLPDETYYKDPLLRPYTFFDITHGRESHRGGSVSYQNIHEAQFCLRMY 1126
Query: 631 HKLISMYPQLKSSS----QLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGR 686
L +KSS + II+PY+ Q+K Q F+E E K + I TVD QG+
Sbjct: 1127 EHLQKT---VKSSGIGKVSVGIITPYKLQLKCLQREFEEVLNSEEGKDLYINTVDAFQGQ 1183
Query: 687 EKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSA 746
E+DV I SCVRAS+ +GF+AD RRMNV +TRA+ ++ V+G A+ L + W L+ A
Sbjct: 1184 ERDVIIMSCVRASN-HGVGFVADIRRMNVALTRARRALWVMGNANALIQSDDWAALITDA 1242
Query: 747 EKQDCLFRVSKPYASFFSDE-NLESMRKNATTDNVQGADGHVP 788
+ ++C + F + + +S + N +G +P
Sbjct: 1243 KARNCYMDMESLPKDFLGQKGSTQSTLPGKNSSNTRGLRSALP 1285
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 107/423 (25%), Positives = 178/423 (42%), Gaps = 74/423 (17%)
Query: 51 LREVKDTYKDVDDYLATFEPLLFEEVKAQIIQ---------KKDEEEVQEWKLRLVMECG 101
L+ V ++ V++Y+ FEPLLFEE +AQ+ +D + K E G
Sbjct: 454 LQCVPGRFESVEEYIKVFEPLLFEECRAQLYSTWEELSETFSRDTHAMVRVKNIDRRERG 513
Query: 102 EADGFHLPSVTYEADEVE-SISPNDLLLLSKEEFKEGSTFPTTYAFALVEHCQANLLRLR 160
D LP +E + S D+ +LS + GS + V A +R
Sbjct: 514 WYDVIVLP-----VNECKWSFKEGDVAVLSS--LRPGSDDEDQESGGRV----AGTVRRH 562
Query: 161 MYL-----AGEVIHI---NKDAVKSQRLLNIHSLITSSVSAVEKRLFSLKICSLSTIARE 212
+ L G ++H + S+R+ H L V F + SL+T RE
Sbjct: 563 IPLDTRDPPGAILHFYVGDSYDPSSRRIEEDHILRKLQTKNV---WFLTVLGSLATTQRE 619
Query: 213 YLALRSVGSLPFK---DLILSASEKSSGSQDQSWKIPGLLHE----YIKENHNASQLEAI 265
Y+AL + L + ++ + E+ + QS +P + Y+ N QL AI
Sbjct: 620 YVALHAFRRLNMQMQSSILQPSPEQFPKYEQQSPAMPECFTQNFVDYLHRTFNGPQLSAI 679
Query: 266 H-----------EGLLRK----AFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGL 310
G +++ F L+QGPPGTGKT T+ G+L+ ++H + + L
Sbjct: 680 QWAATHTAAGTSSGTVKRQEPWPFTLVQGPPGTGKTHTVWGMLN-VIHLVQYQHYYTSLL 738
Query: 311 REIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNSSR 370
+++ E Y +S V D ++ D T L P
Sbjct: 739 KKL-------APESYKQAHESSSDHVNTGSIDEVL--QSMDQNLLRTLPTLCP------- 782
Query: 371 RYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAH-HSVNSVAIDHL 429
+ R+LVCAPSN+A DE++ R+L+ G D ++ Y P + R+G+ + + +V+++
Sbjct: 783 --KPRMLVCAPSNAATDELLARVLDRGFIDGEMKVYRPDVARVGVDSQTRAAQAVSVERR 840
Query: 430 VEQ 432
EQ
Sbjct: 841 TEQ 843
>gi|58270392|ref|XP_572352.1| hypothetical protein CNH01780 [Cryptococcus neoformans var.
neoformans JEC21]
gi|57228610|gb|AAW45045.1| hypothetical protein CNH01780 [Cryptococcus neoformans var.
neoformans JEC21]
Length = 2245
Score = 265 bits (676), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 207/621 (33%), Positives = 298/621 (47%), Gaps = 149/621 (23%)
Query: 202 KICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIKENH---- 257
K SLST RE+ AL+ LP+ + L S+ +G +S +P L + I++
Sbjct: 1440 KHVSLSTSIREFAALKG---LPWYESSL-LSDILAG---RSAVMPKLSTQRIEDTMKCLS 1492
Query: 258 -NASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLREIKRG 316
N Q +A+ L + F LIQGPPGTGKT+TI G
Sbjct: 1493 LNEPQAKAVLGALEVRGFALIQGPPGTGKTKTISG------------------------- 1527
Query: 317 PELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNSSRRYRVRV 376
LVG + +PI D +P V + ++
Sbjct: 1528 ------------------LVGKWMSERRVPISVDG----------QPPV-------KPKL 1552
Query: 377 LVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKA--HHSVNSVAIDHLVEQKR 434
LVCAPSN+A+DE+ RL+ G+ + + Y P IVR+G+ A + +V V++D LVE
Sbjct: 1553 LVCAPSNAAIDEVCKRLI-LGVPNPDGGQYNPNIVRVGIDASVNIAVKDVSLDSLVEALI 1611
Query: 435 DDSAA----------------------DKQK-------------------HG-------- 445
+S+ DKQ+ H
Sbjct: 1612 SNSSGRNVGGEYGRIQAELDDVKQQIKDKQEAIKLAQDHDEKRKVLEDEYHALITRRTQL 1671
Query: 446 --ATRKDRDSIRSA--------------ILNEAVIVCSTLSFSGSALLSKLNHGFDVVII 489
A+ K +D+ R A IL +A I+C+TLS +G L+ H F+ VII
Sbjct: 1672 GQASSKAKDAARDATRHLDGARRAARDQILKDADIICATLSGAGHDTLAA--HTFETVII 1729
Query: 490 DEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRL-QRAGYP 548
DEAAQA+E + L+PL GCK+ +VGDP QLP T S AE L Y SLF R+ +R
Sbjct: 1730 DEAAQAIEMSCLIPLKYGCKRCVMVGDPNQLPPTTFSTNAEKLQYNKSLFVRMTKRDASH 1789
Query: 549 VKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKE 608
V++L QYRMHP + PS+ FY L+DG + T WH+ FGP+ FF++ EG E
Sbjct: 1790 VQLLSIQYRMHPFISELPSKVFYHGQLKDGPSMAKKTAAIWHQRNIFGPYRFFNV-EGTE 1848
Query: 609 SQPAGSGSWINIDEVDFVLLLFHKLISMY-PQLKSSSQLAIISPYRHQVKQFQERFKETF 667
+ S N E + L+ +L + + ++ + ++ +IS YR Q+ + + +F E F
Sbjct: 1849 MKTGTSTK--NPAEALAAVELYRRLSADFGTRVNLAMRVGVISMYREQLWELKRKFTEAF 1906
Query: 668 GVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKS-IGFLADYRRMNVGITRAKSSILV 726
G ++V+ TVDG QG+EKD+ I SCVR+ S IGFL D RRMNV +TRAKSS+ +
Sbjct: 1907 GSAILELVEFNTVDGFQGQEKDIIILSCVRSGPNLSHIGFLKDTRRMNVALTRAKSSLFI 1966
Query: 727 VGCASTL-REDKHWNNLVKSA 746
G TL R D+ W +V+ A
Sbjct: 1967 FGNGPTLERSDERWKIIVQDA 1987
>gi|403223698|dbj|BAM41828.1| tRNA-splicing endonuclease [Theileria orientalis strain Shintoku]
Length = 798
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 200/591 (33%), Positives = 271/591 (45%), Gaps = 114/591 (19%)
Query: 202 KICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQS--------WKIPGLLHEYI 253
K+ SL+TI RE+ L + ++P KD +L+ + + D +++P L I
Sbjct: 236 KLISLTTILREFKGLCMLSNMPLKDSLLTVMSERKNTLDPDTTNELIVDFEVPPRLKRTI 295
Query: 254 KENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLREI 313
+EN+N+ QL A+ L+ + LIQGPPGTGKT TI+G++ I
Sbjct: 296 EENYNSGQLSAVSNSLMTEGISLIQGPPGTGKTTTIMGIV-------------------I 336
Query: 314 KRGPELPMHEKYNHWGRASPWLVGANPR-DNIMP--IDGDDGFFPTTGNELKPEVVNSSR 370
G E NH R +N D I+ + D G F GN P V
Sbjct: 337 HLGSE-------NHSNRRILICAPSNAAIDEIVKRLVSPDGGIFDPQGNRYNPTVTRVGP 389
Query: 371 RYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLV 430
+ E+++ Y+ + LK S N+++ HL
Sbjct: 390 NFH---------------------------EDLKEYS---LETKLKKWLSKNNLS--HL- 416
Query: 431 EQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIID 490
K G T K R +I IL + IVCSTLS GS L L + FD +IID
Sbjct: 417 ----------KGDRGNTAK-RPTIIMDILLNSEIVCSTLSGCGSRELYGLINCFDTLIID 465
Query: 491 EAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVK 550
EA QAVE +TL+P GCK+ LVGDP QL ATV S VA L Y SLFKRLQ GYPV
Sbjct: 466 EATQAVELSTLIPFNLGCKRAILVGDPCQLSATVCSKVAIQLNYDQSLFKRLQLCGYPVN 525
Query: 551 MLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFF--DIHEGKE 608
LK QYRM P + FPS FY L + DW ++ F P FF D HE +
Sbjct: 526 FLKLQYRMDPLITRFPSMYFYQNQLINAKKSLSKPEEDWRQFPLFRPTVFFAIDSHESRN 585
Query: 609 SQPAGSGSWINIDEVDFVLLLFHKLI---SMYPQLKS---SSQLAIISPYRHQVKQFQER 662
S++N EVD V L LI S P + + + ++A+ISPY Q + +
Sbjct: 586 DT-----SYVNEMEVDLVCQLLEMLIEIMSTIPGITAEEIARKIAVISPYAAQAEILKST 640
Query: 663 FKETFGVESQKVVD--------------ITTVDGCQGREKDVAIFSCVR------ASDKK 702
+ + Q V ++TVDG QG EKD+ IFS VR ++
Sbjct: 641 ISQRIKINPQTNVPDYSKITPSKTNQIYVSTVDGFQGMEKDIIIFSAVRTNYVDLTANVI 700
Query: 703 SIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLF 753
F+AD RR+NV ITRA S++L+VG L + KHW+ L K +F
Sbjct: 701 DASFIADRRRINVAITRACSNLLIVGNPRYLLDHKHWSALYNHYAKTGSIF 751
>gi|255951120|ref|XP_002566327.1| Pc22g24390 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211593344|emb|CAP99727.1| Pc22g24390 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 2167
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 135/319 (42%), Positives = 198/319 (62%), Gaps = 7/319 (2%)
Query: 436 DSAADKQKHGATRKD--RDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAA 493
D A D+ A D + I+ I+NE+ ++C+TLS SG + +N F+ VIIDEAA
Sbjct: 1496 DKARDQNHTLARNADMHKRRIQEQIINESHVICTTLSGSGHEIFQSMNVEFETVIIDEAA 1555
Query: 494 QAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYP--VKM 551
Q +E + L+PL GC + LVGDP QLP TV+S +A Y SLF R+Q+ +P V +
Sbjct: 1556 QCIELSALIPLKYGCSKCVLVGDPKQLPPTVLSKMASKFQYEQSLFVRMQK-NHPQDVHL 1614
Query: 552 LKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQP 611
L QYRMHP + FPS FYD L+DG D+ R WH+ GP+ FFD+ +G S
Sbjct: 1615 LDVQYRMHPAISHFPSVTFYDGKLQDGPDMATLRQRPWHQSELLGPYRFFDV-QGMHSSA 1673
Query: 612 AGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVES 671
S +N E+ + L+ +LI+ + + ++ II+PY+ Q+++ + +F + +G +
Sbjct: 1674 VRGHSLVNYAELQVAMRLYDRLITDVKEYDFAGKIGIITPYKGQLRELKNQFTQRYGEDI 1733
Query: 672 QKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCAS 731
+ VD T D QGRE +V IFSCVRAS+ K IGFLAD RRMNVG+TRAKSS+ V+G +
Sbjct: 1734 LRKVDFNTTDAFQGRESEVIIFSCVRASN-KGIGFLADIRRMNVGLTRAKSSLWVLGNSQ 1792
Query: 732 TLREDKHWNNLVKSAEKQD 750
+L + + WN L+K+A +++
Sbjct: 1793 SLEQGQFWNGLIKNARERN 1811
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 117/286 (40%), Gaps = 48/286 (16%)
Query: 21 ILGWDYFRL--VKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKA 78
IL WD+F + + +R D + V +T++ DDY TFEPLL E
Sbjct: 1100 ILSWDFFATGDLPPTSDRTDYSL------------VLNTFRTPDDYQRTFEPLLILEAWQ 1147
Query: 79 QIIQKKDEEEVQEWKLRLVMECG-------EADGFHLPSVTYEADEVESISPNDLLLLSK 131
Q KDE + ++++++ LP + SI DL+L S
Sbjct: 1148 GFQQAKDEGSFRPFEVKVMTRLAVDSWIEFSTQPLGLPPKDF------SIGEGDLVLFSN 1201
Query: 132 EEFKEGSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSV 191
T + L C N +M + +N + K ++S
Sbjct: 1202 SP---NLTSDPSAPHVLARVCGVNRKNKKMEV---TYRVNPGSNK---------FLSSFG 1246
Query: 192 SAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHE 251
E + KI SL+ + REY AL ++ + I+ A + + ++ ++
Sbjct: 1247 PGTEA--WGAKITSLTPVEREYGALMALQYYDLCEEIVLAKPSPLLTYSDA-RLQTIMDN 1303
Query: 252 YIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAIL 297
Y + N +Q AI + AF LIQGPPG+GKT+TI L+ ++L
Sbjct: 1304 Y---SINRAQARAIKSAVDNDAFTLIQGPPGSGKTKTITALVGSLL 1346
>gi|388853403|emb|CCF53023.1| related to SEN1 protein [Ustilago hordei]
Length = 2314
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 142/322 (44%), Positives = 202/322 (62%), Gaps = 7/322 (2%)
Query: 436 DSAADKQK--HGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAA 493
D A DKQ+ H DR R IL +A ++C+TLS +G +LS + F+ V+IDEAA
Sbjct: 1697 DEAKDKQQSQHRQREADRRRARLEILGDADVICTTLSGAGHEMLSGVAFDFETVVIDEAA 1756
Query: 494 QAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRL-QRAGYPVKML 552
QAVE +T++PL GCKQ +VGDP QLP TVIS A+ LGY SLF R+ +RA V +L
Sbjct: 1757 QAVELSTIIPLRYGCKQCIMVGDPNQLPPTVISQQADKLGYSQSLFVRMFERAPQAVHLL 1816
Query: 553 KTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPA 612
QYRMHPE+ FPS+ FYD L+DG D+ + T + WH+Y PF F + ES P
Sbjct: 1817 SIQYRMHPEISVFPSKAFYDSKLQDGPDMAELTRQPWHKYELTRPFKFLST-KAPES-PG 1874
Query: 613 GSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQ 672
S IN +E + L L+ +L + P+ ++ I++ Y+ QV + + F++ +G +
Sbjct: 1875 RFHSIINKEEANVALALYERLRTDNPRENFDYRIGIVTMYKAQVFELKRTFQQRYGQDIV 1934
Query: 673 KVVDITTVDGCQGREKDVAIFSCVRASDK-KSIGFLADYRRMNVGITRAKSSILVVGCAS 731
+ +D TVDG QG+EKD+ I SCVR+ K SIGFL+D RR+NV +TRAKS++ ++G A
Sbjct: 1935 ERIDFNTVDGFQGQEKDIIILSCVRSLPKPSSIGFLSDRRRLNVAVTRAKSNLFIIGNAE 1994
Query: 732 TLRE-DKHWNNLVKSAEKQDCL 752
LR D W +LV +AE++ +
Sbjct: 1995 HLRRGDAIWESLVAAAEQRGAV 2016
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 116/262 (44%), Gaps = 66/262 (25%)
Query: 202 KICSLSTIAREYLALRSVGSLP-FKDLILS-ASEKSSGSQDQSWKIPGLLHEYIKENHNA 259
K+ SL+T+ REY AL F D+I + + K++ + D+ K + Y N
Sbjct: 1449 KLFSLTTLHREYGALMVAPHFDLFSDVIKARVAPKATLAADEVRKA---MQGY---QVNE 1502
Query: 260 SQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLREIKRGPEL 319
Q AI L F LIQGPPGTGKT+TI L+ G ++GP
Sbjct: 1503 PQARAILGSLATGGFSLIQGPPGTGKTKTICALI--------------GAFVSRRKGPST 1548
Query: 320 PMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNSSRRYRVRVLVC 379
+ G+A VGA ++L+C
Sbjct: 1549 SVQA-----GQAQ-GKVGAT----------------------------------KKILLC 1568
Query: 380 APSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKA--HHSVNSVAIDHLVEQKRD-D 436
APSN+A+DE+ R GIR + + PK+VR+G + + SV +++++L+EQ+ +
Sbjct: 1569 APSNAAIDEVAKR-ARAGIRLLDGKVIHPKVVRVGREETINVSVKDISLEYLIEQRLEGG 1627
Query: 437 SAADKQKHGATRKDRDSIRSAI 458
SA D ++ AT D ++ + I
Sbjct: 1628 SAFDANRNSATAADPSALHAEI 1649
Score = 44.7 bits (104), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 112/256 (43%), Gaps = 34/256 (13%)
Query: 52 REVKDTYKDVDDYLATFEPLLFEEVKAQIIQKKDEEEV-QEWKLRL-VMECGEADGFHLP 109
R ++ + + ++Y PLL E AQ Q K+E + E + L V D F
Sbjct: 1309 RHIQPHFANANEYGLVLGPLLLLECWAQFRQAKEEADTNNEPSIPLEVAGRSTVDMFVDV 1368
Query: 110 SVTYEADEVES-ISPNDLLLLSKEEFKEG-STFPTTYAFALVE----HCQANLLRLRMYL 163
+VT D + I+ ND ++ +E + S A V+ H Q + L LR L
Sbjct: 1369 NVTIPPDVLPPMINYNDAEIVRLKERRPAISGKEAKIILAKVQVFKRHPQGHQLTLRCCL 1428
Query: 164 AGEVIHINKDAVKSQRLLNIHSLITSSVSAVEKRLFSLKICSLSTIAREYLALRSVGSLP 223
A + ++ +L+ S V K+LF SL+T+ REY AL
Sbjct: 1429 ADDRQGVST------------ALVNRSKWEV-KKLF-----SLTTLHREYGALMVAPHFD 1470
Query: 224 -FKDLILS-ASEKSSGSQDQSWKIPGLLHEYIKENHNASQLEAIHEGLLRKAFVLIQGPP 281
F D+I + + K++ + D+ K + Y N Q AI L F LIQGPP
Sbjct: 1471 LFSDVIKARVAPKATLAADEVRKA---MQGY---QVNEPQARAILGSLATGGFSLIQGPP 1524
Query: 282 GTGKTQTILGLLSAIL 297
GTGKT+TI L+ A +
Sbjct: 1525 GTGKTKTICALIGAFV 1540
>gi|224082154|ref|XP_002306584.1| predicted protein [Populus trichocarpa]
gi|222856033|gb|EEE93580.1| predicted protein [Populus trichocarpa]
Length = 1147
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 141/314 (44%), Positives = 188/314 (59%), Gaps = 2/314 (0%)
Query: 451 RDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQ 510
R S+ ++ NEA IV +T+S SG L S+L HGFD+V+IDEAAQA E A L PLA G +
Sbjct: 736 RASLEASFANEAEIVFTTVSSSGRKLFSRLTHGFDMVVIDEAAQASEVAVLPPLALGAAR 795
Query: 511 VFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREF 570
LVGDP QLPATVIS A L Y SLF+R Q+AG P +L QYRMHP++R FPSR F
Sbjct: 796 CVLVGDPQQLPATVISKAAGTLLYSRSLFERFQQAGCPTMLLSVQYRMHPQIRDFPSRYF 855
Query: 571 YDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
Y L D V + +++ P+ F+D+ G+ES GS S+ NI E F L L+
Sbjct: 856 YQGRLTDSESVANLPDETYYKDPLLRPYLFYDVTHGRESHRGGSVSYQNIHEAQFCLQLY 915
Query: 631 HKLISMYPQLKSSS-QLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKD 689
L L + II+PY+ Q+K Q+ F E K + I TVD QG+E+D
Sbjct: 916 EHLQKSLKSLGMGRITVGIITPYKLQLKCLQQEFSAVLKSEEGKDIYINTVDAFQGQERD 975
Query: 690 VAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQ 749
V I SCVRAS+ +GF+AD RRMNV +TRAK ++ V+G A++L + W+ LV A+ +
Sbjct: 976 VIIMSCVRASN-HGVGFVADIRRMNVALTRAKRALWVMGNATSLVQSDDWSALVADAKAR 1034
Query: 750 DCLFRVSKPYASFF 763
+C + FF
Sbjct: 1035 NCYMNMDSLPKDFF 1048
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 121/257 (47%), Gaps = 42/257 (16%)
Query: 199 FSLKICSLSTIAREYLALRSVGSLPFK---DLILSASEKSSGSQDQSWKIPGLLHE---- 251
F + SL+T REY+AL + L + ++ +S+ + Q+ +P +
Sbjct: 395 FLTVLGSLATTQREYVALHAFCRLNLQMQAAILKPSSDHFPKYEQQTPAMPECFTQNFVD 454
Query: 252 YIKENHNASQLEAIH-----------EGLLRK----AFVLIQGPPGTGKTQTILGLLSAI 296
+++ N QL AI G+ ++ F L+QGPPGTGKT T+ G+L+ +
Sbjct: 455 HLRRTFNGPQLAAIQWAATHTAAGTSSGVTKRQEPWPFTLVQGPPGTGKTHTVWGMLN-V 513
Query: 297 LHATPARVHSKGGLREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPT 356
+H + + L+++ + Y ++ + D ++ + D F +
Sbjct: 514 IHLVQYQHYYTSLLKKL-------APQSYKQANESNSDNIALGSIDEVL-HNMDQNLFRS 565
Query: 357 TGNELKPEVVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLK 416
++L P + R+LVCAPSN+A DE++ R+L+ G D ++ Y P + R+G+
Sbjct: 566 L-SKLCP---------KPRMLVCAPSNAATDELLARVLDRGFIDGEMKVYRPDVARVGVD 615
Query: 417 AH-HSVNSVAIDHLVEQ 432
+ + +V+++ EQ
Sbjct: 616 SQSRAAQAVSVERRTEQ 632
>gi|218184058|gb|EEC66485.1| hypothetical protein OsI_32578 [Oryza sativa Indica Group]
Length = 1360
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 137/304 (45%), Positives = 183/304 (60%), Gaps = 2/304 (0%)
Query: 451 RDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQ 510
R S+ ++ NEA IV +T+S SG L S+L+HGFD+V+IDEAAQA E A L PL+ G +
Sbjct: 957 RASLEASFANEAEIVFTTVSSSGRKLFSRLSHGFDMVVIDEAAQASEVAVLPPLSLGAAR 1016
Query: 511 VFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREF 570
LVGDP QLPATVIS A L Y SLF+R Q +G P +L QYRMHP++R FPSR F
Sbjct: 1017 CVLVGDPQQLPATVISKAAGTLMYSRSLFERFQLSGCPTILLSVQYRMHPQIREFPSRHF 1076
Query: 571 YDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
Y L D V ++ P+ F+DI G+ES GS S+ N+ E FVL L+
Sbjct: 1077 YQGRLTDSESVVKLPDEAYYRDALMAPYIFYDISHGRESHRGGSSSYQNVHEAQFVLRLY 1136
Query: 631 HKLIS-MYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKD 689
L + + + II+PY+ Q+K Q F+E E K + I TVD QG+E+D
Sbjct: 1137 ENLQKFLRANGGKKASVGIITPYKLQLKCLQREFEEVMSTEDGKDIYINTVDAFQGQERD 1196
Query: 690 VAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQ 749
V I SCVRAS+ +GF+AD RRMNV +TRA+ ++ VVG A L + + W L+ A+ +
Sbjct: 1197 VIIMSCVRASN-HGVGFVADIRRMNVALTRARRALWVVGNAGALMQSEDWALLIADAKAR 1255
Query: 750 DCLF 753
C
Sbjct: 1256 KCFM 1259
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 124/261 (47%), Gaps = 43/261 (16%)
Query: 203 ICSLSTIAREYLALRSVGSL--PFKDLILSAS-EKSSGSQDQSWKIPGLL----HEYIKE 255
+ SL+T REY+AL + L ++ IL S E ++Q +P +++
Sbjct: 617 LGSLATTQREYVALHAFRRLNVQMQNAILQPSPEHFPKYEEQPPAMPDCFTPNFADHLHR 676
Query: 256 NHNASQLEAIHEGLLRKA---------------FVLIQGPPGTGKTQTILGLLSAILHAT 300
N QL AIH + A F L+QGPPGTGKT T+ G+L+ ++H
Sbjct: 677 TFNGPQLSAIHWAAMHTAAGTSNGAVKKQEPWPFTLVQGPPGTGKTHTVWGMLN-VIHLV 735
Query: 301 PARVHSKGGLREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNE 360
+ + L+++ PE +++ + S V A D ++ D F T +
Sbjct: 736 QYQHYYAALLKKL--APE--SYKQVSGNTSNSSETVAAGSIDEVLQ-SMDQNLFRTLP-K 789
Query: 361 LKPEVVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAH-H 419
L P + R+LVCAPSN+A DE++ R+L+ G D ++ Y P + R+G+ +
Sbjct: 790 LCP---------KPRMLVCAPSNAATDELLARVLDRGFIDGEMKVYRPDVARVGVDSQSR 840
Query: 420 SVNSVAI----DHLVEQKRDD 436
+ +V++ D L+ + RD+
Sbjct: 841 AAQAVSVERRTDQLLMKGRDE 861
>gi|357140222|ref|XP_003571669.1| PREDICTED: uncharacterized protein LOC100842761 [Brachypodium
distachyon]
Length = 1452
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 139/304 (45%), Positives = 182/304 (59%), Gaps = 2/304 (0%)
Query: 451 RDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQ 510
R S+ ++ NEA IV +T+S SG L S+L+HGFD+V+IDEAAQA E L PLA G +
Sbjct: 954 RSSLEASFANEAEIVFTTVSSSGRRLFSRLSHGFDMVVIDEAAQASEVGVLPPLALGAAR 1013
Query: 511 VFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREF 570
LVGDP QLPATVIS A L Y SLF+R Q+AG P +L QYRMHP++R FPSR F
Sbjct: 1014 CVLVGDPQQLPATVISKAAGTLLYSRSLFERFQQAGCPTILLSVQYRMHPQIREFPSRYF 1073
Query: 571 YDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
Y L D V ++ P+ F+DI G+ES GS S+ N+ E F L L+
Sbjct: 1074 YQGRLTDSESVVKLPDEAYYRDALMSPYIFYDISHGRESHRGGSSSYQNVHEAQFALRLY 1133
Query: 631 HKLIS-MYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKD 689
L M + II+PY+ Q+K Q F+E E K + I TVD QG+E+D
Sbjct: 1134 EHLQKLMKANGGKKVSVGIITPYKLQLKCLQREFEEVMNTEEGKDIYINTVDAFQGQERD 1193
Query: 690 VAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQ 749
V I SCVRAS+ +GF+AD RRMNV +TRA+ ++ VVG A+ L + + W LV A+ +
Sbjct: 1194 VIIMSCVRASN-HGVGFVADIRRMNVALTRARRALWVVGNANALMQSEDWAALVTDAKAR 1252
Query: 750 DCLF 753
C
Sbjct: 1253 KCFM 1256
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 114/438 (26%), Positives = 192/438 (43%), Gaps = 90/438 (20%)
Query: 51 LREVKDTYKDVDDYLATFEPLLFEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGFHLPS 110
L+ V ++ ++Y+ FEPLLFEE +AQ+ +E +E D H+
Sbjct: 447 LQSVPGSFDSAEEYIRVFEPLLFEECRAQLYSSYEES----------LEAVSRDA-HVMV 495
Query: 111 VTYEADEVESISPNDLLLLSKEE----FKEGS----TFP-----------TTYAFALVEH 151
D E D+++L E FKEG +FP A A E
Sbjct: 496 RVKSVDRRER-GWYDVVVLPTHEYKWIFKEGEVAVLSFPRPGPASQSSRSNRKAVASNED 554
Query: 152 CQANLLRL----RMYLA-------GEVIHIN-KDAVKSQRLLNIHSLITSSVSAVEKR-- 197
+A RL R ++ G +IH + D+ S S T+ + ++ R
Sbjct: 555 AEAECGRLVGTVRRHMPIDTRDPIGAIIHFHVGDSFDSS------SNETNVLRKLQPRST 608
Query: 198 LFSLKICSLSTIAREYLALRSVGSL--PFKDLILSAS-EKSSGSQDQSWKIPGLL----H 250
+ + SL+T REY+AL + L ++ IL + E+ Q+Q +P
Sbjct: 609 WYLTGLGSLATTQREYVALHAFRRLNMQMQNAILQPTPEQFPKYQEQPPAMPDCFTPNFS 668
Query: 251 EYIKENHNASQLEAIH-----------EGLLRK----AFVLIQGPPGTGKTQTILGLLSA 295
+++ N QL AIH G+++K F L+QGPPGTGKT T+ G+L+
Sbjct: 669 DHLNRTFNGPQLSAIHWAAMHTAAGTSNGVVKKQEPWPFTLVQGPPGTGKTHTVWGMLN- 727
Query: 296 ILHATPARVHSKGGLREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFP 355
++H + + L+++ PE +++ +S + A D ++ D F
Sbjct: 728 VIHLVQYQHYYAALLKKL--APE--SYKQVASSTSSSSEVFAAGSIDEVLQ-SMDQNLFR 782
Query: 356 TTGNELKPEVVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGL 415
T +L P + R+LVCAPSN+A DE++ R+L+ G D ++ Y P + R+G+
Sbjct: 783 TLP-KLCP---------KPRMLVCAPSNAATDELLSRVLDRGFIDGEMKVYRPDVARVGV 832
Query: 416 KAH-HSVNSVAIDHLVEQ 432
+ +V+++ EQ
Sbjct: 833 DTQSRAAQAVSVERRTEQ 850
>gi|239610200|gb|EEQ87187.1| tRNA-splicing endonuclease [Ajellomyces dermatitidis ER-3]
Length = 2114
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 140/337 (41%), Positives = 201/337 (59%), Gaps = 13/337 (3%)
Query: 436 DSAADKQKHGATRKD--RDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAA 493
D+A D + A D R ++ I++ A ++C+TLS SG + L+ F+ V+IDEAA
Sbjct: 1488 DNARDSNQAAARNADLARKKVQQEIIDGAHVICATLSGSGHEMFQSLSIEFETVVIDEAA 1547
Query: 494 QAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYP--VKM 551
Q++E + L+PL GC + LVGDP QLP TV+S VA Y SLF R+Q A +P V +
Sbjct: 1548 QSIELSALIPLKYGCSKCVLVGDPKQLPPTVLSKVASRFQYEQSLFVRMQ-ANHPKDVHL 1606
Query: 552 LKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQP 611
L TQYRMHPE+ FPS FYD L+DG + R WH+ GP+ FFD+ S P
Sbjct: 1607 LDTQYRMHPEISRFPSAAFYDGRLQDGPGMAKLRVRPWHKSELLGPYRFFDVQGLHSSAP 1666
Query: 612 AGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVES 671
G S +N+ E+ + L+ +LI+ Y + ++ II+PY+ Q+++ + +F +G
Sbjct: 1667 KGH-SLVNVAELRVAMKLYERLITDYRTYDFTGRIGIITPYKGQLREMKNQFANKYGNSI 1725
Query: 672 QKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCAS 731
V+ T D QGRE +V IFSCVRAS+ + IGFLAD RRMNVG+TRAKSS+ V+G +
Sbjct: 1726 FTKVEFNTTDAFQGRECEVIIFSCVRASN-RGIGFLADIRRMNVGLTRAKSSLWVLGNSQ 1784
Query: 732 TLREDKHWNNLVKSAEKQ------DCLFRVSKPYASF 762
+L + + WN L+ A+ + D L + KP S
Sbjct: 1785 SLVQGEFWNGLITDAQSRNLYTQGDVLHLLQKPQISL 1821
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 110/425 (25%), Positives = 174/425 (40%), Gaps = 99/425 (23%)
Query: 19 KIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKA 78
+ +L W++F + G+ V +T+ D DY TFEPLL E
Sbjct: 1085 RTLLSWEFFA----------NGDLPPNSGRTDYSLVSNTFSDAADYQRTFEPLLILEAWQ 1134
Query: 79 QIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADEVE--SISPNDLLLLSKEEFKE 136
K+E + ++++ V D F + + E + + +DL+LLSK
Sbjct: 1135 SFQSAKEEGGFKAFEIK-VSNRMSVDAFVEVTTFMQPAEAKDLGLGESDLVLLSK----- 1188
Query: 137 GSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSAVEK 196
++ PT+ A HC A + R + K + ++ I I S V
Sbjct: 1189 -ASNPTSNEKA--PHCLARIFR---------------SSKKKGMMEISYRINPSNPLVNS 1230
Query: 197 RL-----FSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHE 251
L F +++ SL+ + REY AL ++ + I+ A K S + S P L
Sbjct: 1231 ILPGTSIFGVRVTSLTPVEREYGALMALKYYDLSEEIIRA--KPSPILNYS---PESLKP 1285
Query: 252 YIKE-NHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGL 310
I N N +Q +A+ + AF LIQGPPG+GKT+TI+ L+ AIL TP K
Sbjct: 1286 IIDTYNVNPAQAKAVRSAMDNDAFTLIQGPPGSGKTKTIVALVGAIL--TPVFAEQK--- 1340
Query: 311 REIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNSSR 370
I R P + LKP ++
Sbjct: 1341 --IAR---------------------------------------PGSSVNLKPATRTTNS 1359
Query: 371 RYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLK--AHHSVNSVAIDH 428
+ ++LVCAPSN+A+DE+V+R G+ + + +VR+G + +V V +D
Sbjct: 1360 K---KLLVCAPSNAAVDELVMR-FKEGVVTSSGQKQNISVVRLGRSDAINSNVIDVTLDE 1415
Query: 429 LVEQK 433
LV K
Sbjct: 1416 LVNAK 1420
>gi|261192749|ref|XP_002622781.1| tRNA-splicing endonuclease [Ajellomyces dermatitidis SLH14081]
gi|239589263|gb|EEQ71906.1| tRNA-splicing endonuclease [Ajellomyces dermatitidis SLH14081]
Length = 2114
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 140/337 (41%), Positives = 201/337 (59%), Gaps = 13/337 (3%)
Query: 436 DSAADKQKHGATRKD--RDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAA 493
D+A D + A D R ++ I++ A ++C+TLS SG + L+ F+ V+IDEAA
Sbjct: 1488 DNARDSNQAAARNADLARKKVQQEIIDGAHVICATLSGSGHEMFQSLSIEFETVVIDEAA 1547
Query: 494 QAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYP--VKM 551
Q++E + L+PL GC + LVGDP QLP TV+S VA Y SLF R+Q A +P V +
Sbjct: 1548 QSIELSALIPLKYGCSKCVLVGDPKQLPPTVLSKVASRFQYEQSLFVRMQ-ANHPKDVHL 1606
Query: 552 LKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQP 611
L TQYRMHPE+ FPS FYD L+DG + R WH+ GP+ FFD+ S P
Sbjct: 1607 LDTQYRMHPEISRFPSAAFYDGRLQDGPGMAKLRVRPWHKSELLGPYRFFDVQGLHSSAP 1666
Query: 612 AGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVES 671
G S +N+ E+ + L+ +LI+ Y + ++ II+PY+ Q+++ + +F +G
Sbjct: 1667 KGH-SLVNVAELRVAMKLYERLITDYRTYDFTGRIGIITPYKGQLREMKNQFANKYGNSI 1725
Query: 672 QKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCAS 731
V+ T D QGRE +V IFSCVRAS+ + IGFLAD RRMNVG+TRAKSS+ V+G +
Sbjct: 1726 FTKVEFNTTDAFQGRECEVIIFSCVRASN-RGIGFLADIRRMNVGLTRAKSSLWVLGNSQ 1784
Query: 732 TLREDKHWNNLVKSAEKQ------DCLFRVSKPYASF 762
+L + + WN L+ A+ + D L + KP S
Sbjct: 1785 SLVQGEFWNGLITDAQSRNLYTQGDVLHLLQKPQISL 1821
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 110/425 (25%), Positives = 174/425 (40%), Gaps = 99/425 (23%)
Query: 19 KIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKA 78
+ +L W++F + G+ V +T+ D DY TFEPLL E
Sbjct: 1085 RTLLSWEFFA----------NGDLPPNSGRTDYSLVSNTFSDAADYQRTFEPLLILEAWQ 1134
Query: 79 QIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADEVE--SISPNDLLLLSKEEFKE 136
K+E + ++++ V D F + + E + + +DL+LLSK
Sbjct: 1135 SFQSAKEEGGFKAFEIK-VSNRMSVDAFVEVTTFMQPAEAKDLGLGESDLVLLSK----- 1188
Query: 137 GSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSAVEK 196
++ PT+ A HC A + R + K + ++ I I S V
Sbjct: 1189 -ASNPTSNEKA--PHCLARIFR---------------SSKKKGMMEISYRINPSNPLVNS 1230
Query: 197 RL-----FSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHE 251
L F +++ SL+ + REY AL ++ + I+ A K S + S P L
Sbjct: 1231 ILPGTSIFGVRVTSLTPVEREYGALMALKYYDLSEEIIRA--KPSPILNYS---PESLKP 1285
Query: 252 YIKE-NHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGL 310
I N N +Q +A+ + AF LIQGPPG+GKT+TI+ L+ AIL TP K
Sbjct: 1286 IIDTYNVNPAQAKAVRSAMDNDAFTLIQGPPGSGKTKTIVALVGAIL--TPVFAEQK--- 1340
Query: 311 REIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNSSR 370
I R P + LKP ++
Sbjct: 1341 --IAR---------------------------------------PGSSVNLKPATRTTNS 1359
Query: 371 RYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLK--AHHSVNSVAIDH 428
+ ++LVCAPSN+A+DE+V+R G+ + + +VR+G + +V V +D
Sbjct: 1360 K---KLLVCAPSNAAVDELVMR-FKEGVVTSSGQKQNISVVRLGRSDAINSNVIDVTLDE 1415
Query: 429 LVEQK 433
LV K
Sbjct: 1416 LVNAK 1420
>gi|16924040|gb|AAL31652.1|AC079179_7 Putative DNA2-NAM7 helicase family protein [Oryza sativa]
gi|125573854|gb|EAZ15138.1| hypothetical protein OsJ_30554 [Oryza sativa Japonica Group]
Length = 1468
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 137/304 (45%), Positives = 183/304 (60%), Gaps = 2/304 (0%)
Query: 451 RDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQ 510
R S+ ++ NEA IV +T+S SG L S+L+HGFD+V+IDEAAQA E A L PL+ G +
Sbjct: 957 RASLEASFANEAEIVFTTVSSSGRKLFSRLSHGFDMVVIDEAAQASEVAVLPPLSLGAAR 1016
Query: 511 VFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREF 570
LVGDP QLPATVIS A L Y SLF+R Q +G P +L QYRMHP++R FPSR F
Sbjct: 1017 CVLVGDPQQLPATVISKAAGTLMYSRSLFERFQLSGCPTILLSVQYRMHPQIREFPSRHF 1076
Query: 571 YDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
Y L D V ++ P+ F+DI G+ES GS S+ N+ E FVL L+
Sbjct: 1077 YQGRLTDSESVVKLPDEAYYRDALMAPYIFYDISHGRESHRGGSSSYQNVHEAQFVLRLY 1136
Query: 631 HKLIS-MYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKD 689
L + + + II+PY+ Q+K Q F+E E K + I TVD QG+E+D
Sbjct: 1137 ENLQKFLRANGGKKASVGIITPYKLQLKCLQREFEEVMSTEDGKDIYINTVDAFQGQERD 1196
Query: 690 VAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQ 749
V I SCVRAS+ +GF+AD RRMNV +TRA+ ++ VVG A L + + W L+ A+ +
Sbjct: 1197 VIIMSCVRASN-HGVGFVADIRRMNVALTRARRALWVVGNAGALMQSEDWALLIADAKAR 1255
Query: 750 DCLF 753
C
Sbjct: 1256 KCFM 1259
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 124/261 (47%), Gaps = 43/261 (16%)
Query: 203 ICSLSTIAREYLALRSVGSL--PFKDLILSAS-EKSSGSQDQSWKIPGLL----HEYIKE 255
+ SL+T REY+AL + L ++ IL S E ++Q +P +++
Sbjct: 617 LGSLATTQREYVALHAFRRLNVQMQNAILQPSPEHFPKYEEQPPAMPDCFTPNFADHLHR 676
Query: 256 NHNASQLEAIHEGLLRKA---------------FVLIQGPPGTGKTQTILGLLSAILHAT 300
N QL AIH + A F L+QGPPGTGKT T+ G+L+ ++H
Sbjct: 677 TFNGPQLSAIHWAAMHTAAGTSNGAVKKQEPWPFTLVQGPPGTGKTHTVWGMLN-VIHLV 735
Query: 301 PARVHSKGGLREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNE 360
+ + L+++ PE +++ + S V A D ++ D F T +
Sbjct: 736 QYQHYYAALLKKL--APE--SYKQVSGNTSNSSETVAAGSIDEVLQ-SMDQNLFRTL-PK 789
Query: 361 LKPEVVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAH-H 419
L P + R+LVCAPSN+A DE++ R+L+ G D ++ Y P + R+G+ +
Sbjct: 790 LCP---------KPRMLVCAPSNAATDELLARVLDRGFIDGEMKVYRPDVARVGVDSQSR 840
Query: 420 SVNSVAI----DHLVEQKRDD 436
+ +V++ D L+ + RD+
Sbjct: 841 AAQAVSVERRTDQLLMKGRDE 861
>gi|327355296|gb|EGE84153.1| tRNA-splicing endonuclease [Ajellomyces dermatitidis ATCC 18188]
Length = 2179
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 140/337 (41%), Positives = 201/337 (59%), Gaps = 13/337 (3%)
Query: 436 DSAADKQKHGATRKD--RDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAA 493
D+A D + A D R ++ I++ A ++C+TLS SG + L+ F+ V+IDEAA
Sbjct: 1488 DNARDSNQAAARNADLARKKVQQEIIDGAHVICATLSGSGHEMFQSLSIEFETVVIDEAA 1547
Query: 494 QAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYP--VKM 551
Q++E + L+PL GC + LVGDP QLP TV+S VA Y SLF R+Q A +P V +
Sbjct: 1548 QSIELSALIPLKYGCSKCVLVGDPKQLPPTVLSKVASRFQYEQSLFVRMQ-ANHPKDVHL 1606
Query: 552 LKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQP 611
L TQYRMHPE+ FPS FYD L+DG + R WH+ GP+ FFD+ S P
Sbjct: 1607 LDTQYRMHPEISRFPSAAFYDGRLQDGPGMAKLRVRPWHKSELLGPYRFFDVQGLHSSAP 1666
Query: 612 AGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVES 671
G S +N+ E+ + L+ +LI+ Y + ++ II+PY+ Q+++ + +F +G
Sbjct: 1667 KGH-SLVNVAELRVAMKLYERLITDYRTYDFTGRIGIITPYKGQLREMKNQFANKYGNSI 1725
Query: 672 QKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCAS 731
V+ T D QGRE +V IFSCVRAS+ + IGFLAD RRMNVG+TRAKSS+ V+G +
Sbjct: 1726 FTKVEFNTTDAFQGRECEVIIFSCVRASN-RGIGFLADIRRMNVGLTRAKSSLWVLGNSQ 1784
Query: 732 TLREDKHWNNLVKSAEKQ------DCLFRVSKPYASF 762
+L + + WN L+ A+ + D L + KP S
Sbjct: 1785 SLVQGEFWNGLITDAQSRNLYTQGDVLHLLQKPQISL 1821
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 111/428 (25%), Positives = 176/428 (41%), Gaps = 105/428 (24%)
Query: 19 KIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKA 78
+ +L W++F + G+ V +T+ D DY TFEPLL E
Sbjct: 1085 RTLLSWEFFA----------NGDLPPNSGRTDYSLVSNTFSDAADYQRTFEPLLILEAWQ 1134
Query: 79 QIIQKKDEEEVQEWKLRLVMECG-----EADGFHLPSVTYEADEVESISPNDLLLLSKEE 133
K+E + +++++ E F P+ EA ++ + +DL+LLSK
Sbjct: 1135 SFQSAKEEGGFKAFEIKVSNRMSVDAFVEVTTFMQPA---EAKDL-GLGESDLVLLSK-- 1188
Query: 134 FKEGSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSA 193
++ PT+ A HC A + R + K + ++ I I S
Sbjct: 1189 ----ASNPTSNEKA--PHCLARIFR---------------SSKKKGMMEISYRINPSNPL 1227
Query: 194 VEKRL-----FSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGL 248
V L F +++ SL+ + REY AL ++ + I+ A K S + S P
Sbjct: 1228 VNSILPGSSIFGVRVTSLTPVEREYGALMALKYYDLSEEIIRA--KPSPILNYS---PES 1282
Query: 249 LHEYIKE-NHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSK 307
L I N N +Q +A+ + AF LIQGPPG+GKT+TI+ L+ AIL TP K
Sbjct: 1283 LKPIIDTYNVNPAQAKAVRSAMDNDAFTLIQGPPGSGKTKTIVALVGAIL--TPVFAEQK 1340
Query: 308 GGLREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVN 367
I R P + LKP
Sbjct: 1341 -----IAR---------------------------------------PGSSVNLKPATRT 1356
Query: 368 SSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLK--AHHSVNSVA 425
++ + ++LVCAPSN+A+DE+V+R G+ + + +VR+G + +V V
Sbjct: 1357 TNSK---KLLVCAPSNAAVDELVMR-FKEGVVTSSGQKQNISVVRLGRSDAINSNVIDVT 1412
Query: 426 IDHLVEQK 433
+D LV K
Sbjct: 1413 LDELVNAK 1420
>gi|295662663|ref|XP_002791885.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226279537|gb|EEH35103.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 2130
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 135/321 (42%), Positives = 198/321 (61%), Gaps = 7/321 (2%)
Query: 436 DSAADKQKHGATRKD--RDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAA 493
D A D A D R I+ +L +A ++C+TLS SG + L+ F+ V+IDEAA
Sbjct: 1485 DDARDSNLVAARNADLLRRKIQQNVLEDAHVLCATLSGSGHEMFQSLDIEFETVVIDEAA 1544
Query: 494 QAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYP--VKM 551
Q++E + L+PL GC + LVGDP QLP TV+S VA Y SLF R+Q A +P V +
Sbjct: 1545 QSIELSALIPLKYGCSKCILVGDPKQLPPTVLSKVASRFQYEQSLFVRMQ-ANHPQDVHL 1603
Query: 552 LKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQP 611
L TQYRMHPE+ FPS FYD L+DG D++ +R WH+ FGP+ FFD+ S P
Sbjct: 1604 LDTQYRMHPEISRFPSAAFYDGRLQDGPDMDKLRSRIWHKSELFGPYRFFDVQGLHSSAP 1663
Query: 612 AGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVES 671
G S +N+ EV + L+ +L + + ++++ II+PY+ Q+++ + +F +G
Sbjct: 1664 KGH-SLVNLAEVRVAMKLYERLTTDFKIYDFTNKIGIITPYKGQLREMKNQFANKYGNSI 1722
Query: 672 QKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCAS 731
+++ T D QGRE ++ IFSCVRASD + IGFLAD RRMNVG+TRAKSS+ V+G +
Sbjct: 1723 FTMIEFNTTDAFQGRECEIIIFSCVRASD-RGIGFLADIRRMNVGLTRAKSSLWVLGSSK 1781
Query: 732 TLREDKHWNNLVKSAEKQDCL 752
+L + + W L+ A ++ +
Sbjct: 1782 SLVQGEFWRGLINDAHTRNLV 1802
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 121/288 (42%), Gaps = 69/288 (23%)
Query: 19 KIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKA 78
K +LGWD+F D + G+ V +T+ D DY TF+PLL EV +
Sbjct: 1091 KTLLGWDFF---------ADGDIPPAS-GRTDYALVSNTFSDATDYQKTFQPLLILEVSS 1140
Query: 79 QIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADEVESISPNDLLLLSKEEFKEGS 138
+I V E F P+ + E+ DL+L+SK
Sbjct: 1141 RIT---------------VDSFVEVTTFMRPAEVKDLGLGEA----DLVLISKSS----- 1176
Query: 139 TFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSAVEKRL 198
+ + HC A ++ G K ++ LN+ + + S + A L
Sbjct: 1177 ---DPSSDSKEPHCLARII-------GSTK--KKGMIEVGYRLNVSTPLNSFI-APGNSL 1223
Query: 199 FSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIKENH- 257
F++++ SL+ + REY +L ++ + ILSA P + +Y E+
Sbjct: 1224 FAVRVMSLTPVEREYGSLLALKYYDLSEEILSAR-------------PSPILKYTPESLQ 1270
Query: 258 --------NASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAIL 297
N +Q +A+ L AF LIQGPPG+GKT+TI+ L+ A+L
Sbjct: 1271 PIIDTYKVNPAQAKAVRSALDNDAFTLIQGPPGSGKTKTIIALVGALL 1318
Score = 39.3 bits (90), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLK--AHHSVNSVAIDHLVEQ 432
++LVCAPSN+A+DE+V+R GI + +VR+G + +V V +D LV +
Sbjct: 1358 KLLVCAPSNAAVDELVMR-FKQGIISTDGHKREISVVRLGRSDAINSNVIDVTLDELVNE 1416
Query: 433 KRDDSA 438
K +A
Sbjct: 1417 KLSGTA 1422
>gi|325095786|gb|EGC49096.1| helicase SEN1 [Ajellomyces capsulatus H88]
Length = 2150
Score = 263 bits (671), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 135/319 (42%), Positives = 193/319 (60%), Gaps = 7/319 (2%)
Query: 436 DSAADKQKHGATRKD--RDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAA 493
D+A D + A D R ++ I+N + ++C+TLS SG + L+ F+ V+IDEAA
Sbjct: 1489 DNARDSNQAAARNADLARKKVQQEIINGSHVICATLSGSGHEMFQSLSIEFETVVIDEAA 1548
Query: 494 QAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYP--VKM 551
Q++E + L+PL GC + LVGDP QLP TV+S VA Y SLF R+Q A +P V +
Sbjct: 1549 QSIELSALIPLKYGCSKCILVGDPKQLPPTVLSKVASRFQYEQSLFVRMQ-ANHPKDVHL 1607
Query: 552 LKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQP 611
L TQYRMHPE+ FPS FYD L+DG D+ R WH GP+ FFD+ S P
Sbjct: 1608 LDTQYRMHPEISRFPSTAFYDGRLKDGPDMAKLRVRPWHSSELLGPYRFFDVQGLHSSAP 1667
Query: 612 AGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVES 671
G S +N+ E+ + L+ +L Y ++ II+PY+ Q+++ + +F +G
Sbjct: 1668 KGH-SLVNLAELRVAMKLYERLTIDYMTYDFKGKIGIITPYKGQLREMKNQFANKYGNSI 1726
Query: 672 QKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCAS 731
V+ T D QGRE +V IFSCVRAS+ + IGFLAD RRMNVG+TRAKSS+ V+G +
Sbjct: 1727 FTTVEFNTTDAFQGRECEVIIFSCVRASN-RGIGFLADIRRMNVGLTRAKSSLWVLGNSQ 1785
Query: 732 TLREDKHWNNLVKSAEKQD 750
+L + + WN L+ A+ ++
Sbjct: 1786 SLVQGEFWNGLITDAQSRN 1804
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 102/426 (23%), Positives = 177/426 (41%), Gaps = 101/426 (23%)
Query: 19 KIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKA 78
+ +L W++F + G+ V +T+ D DY TFEPLL E
Sbjct: 1086 RTLLSWEFFA----------NGDLPPNSGRTDYSLVSNTFADAADYQKTFEPLLILEAWQ 1135
Query: 79 QIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTY----EADEVESISPNDLLLLSKEEF 134
K+E + ++++ V D F + +T+ EA ++ ++ +DL+LLSK
Sbjct: 1136 SFQTAKEEGGFKAFEIK-VSNRMSVDAF-VEVITFMQPTEAKDL-GLAESDLVLLSK--- 1189
Query: 135 KEGSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSAV 194
S P++ A HC A + R +VK + ++ I I S +
Sbjct: 1190 ---SNNPSSDEKA--PHCLARIFR---------------SVKKKGMMEISYRINPSNPLM 1229
Query: 195 EK-----RLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLL 249
L ++++ SL+ + REY A+ ++ + I+ K+ S ++ + L
Sbjct: 1230 SSILPGASLHAVRVASLTPVEREYGAMMALKYYDLSEEII----KAKPSPILNYSLESLK 1285
Query: 250 HEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGG 309
N +Q +A+ + AF LIQGPPG+GKT+TI+ L+ AIL TP K
Sbjct: 1286 PIIDTYKVNPAQAKAVRSAMDNDAFTLIQGPPGSGKTKTIVALVGAIL--TPVFAEQK-- 1341
Query: 310 LREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNSS 369
I R P + + +P ++
Sbjct: 1342 ---ITR---------------------------------------PGSSGDFRPATRATT 1359
Query: 370 RRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLK--AHHSVNSVAID 427
++LVCAPSN+A+DE+V+R G+ + + + ++R+G + +V V +D
Sbjct: 1360 SG---KLLVCAPSNAAVDELVMR-FKEGVITSSGQKHNISVIRLGRSDAINSNVMDVTLD 1415
Query: 428 HLVEQK 433
LV K
Sbjct: 1416 ELVNAK 1421
>gi|449529064|ref|XP_004171521.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized ATP-dependent
helicase C29A10.10c-like [Cucumis sativus]
Length = 1363
Score = 263 bits (671), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 144/343 (41%), Positives = 200/343 (58%), Gaps = 9/343 (2%)
Query: 451 RDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQ 510
R S+ ++ NEA IV +T+S SG L S+L+HGFD+V+IDEAAQA E A L P + G +
Sbjct: 947 RASLEASFANEAEIVFTTVSSSGRKLFSRLSHGFDMVVIDEAAQASEVAVLPPXSLGAAR 1006
Query: 511 VFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREF 570
LVGDP QLPATVIS A L Y SLF+R Q+AG P +L QYRMHP++R FPSR F
Sbjct: 1007 CVLVGDPQQLPATVISKAAGTLLYSRSLFERFQQAGCPTMLLSVQYRMHPQIRDFPSRYF 1066
Query: 571 YDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
Y L D V + +++ P++FFDI G+ES GS S+ NI E F L ++
Sbjct: 1067 YQGRLTDSESVANLPDETYYKDPLLRPYTFFDITHGRESHRGGSVSYQNIHEAQFCLRMY 1126
Query: 631 HKLISMYPQLKSSS----QLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGR 686
L +KSS + II+PY+ Q+K Q F+E E K + I TVD QG+
Sbjct: 1127 EHLQKT---VKSSGIGKVSVGIITPYKLQLKCLQREFEEVLNSEEGKDLYINTVDAFQGQ 1183
Query: 687 EKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSA 746
E+DV I SCVRAS+ +GF+AD RRMNV +TRA+ ++ V+G A+ L + W L+ A
Sbjct: 1184 ERDVIIMSCVRASN-HGVGFVADIRRMNVALTRARRALWVMGNANALIQSDDWAALITDA 1242
Query: 747 EKQDCLFRVSKPYASFFSDE-NLESMRKNATTDNVQGADGHVP 788
+ ++C + F + + +S + N +G +P
Sbjct: 1243 KARNCYMDMESLPKDFLGQKGSTQSTLPGKNSSNTRGLRSALP 1285
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 116/257 (45%), Gaps = 42/257 (16%)
Query: 199 FSLKICSLSTIAREYLALRSVGSLPFK---DLILSASEKSSGSQDQSWKIPGLLHE---- 251
F + SL+T REY+AL + L + ++ + E+ + QS +P +
Sbjct: 606 FLTVLGSLATTQREYVALHAFRRLNMQMQSSILQPSPEQFPKYEQQSPAMPECFTQNFVD 665
Query: 252 YIKENHNASQLEAIH-----------EGLLRK----AFVLIQGPPGTGKTQTILGLLSAI 296
Y+ N QL AI G +++ F L+QGPPGTGKT T+ G+L+ +
Sbjct: 666 YLHRTFNGPQLSAIQWAATHTAAGTSSGTVKRQEPWPFTLVQGPPGTGKTHTVWGMLN-V 724
Query: 297 LHATPARVHSKGGLREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPT 356
+H + + L+++ E Y +S V D ++ D
Sbjct: 725 IHLVQYQHYYTSLLKKL-------APESYKQAHESSSDHVNTGSIDEVL--QSMDQNLLR 775
Query: 357 TGNELKPEVVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLK 416
T L P + R+LVCAPSN+A DE++ R+L+ G D ++ Y P + R+G+
Sbjct: 776 TLPTLCP---------KPRMLVCAPSNAATDELLARVLDRGFIDGEMKVYRPDVARVGVD 826
Query: 417 AH-HSVNSVAIDHLVEQ 432
+ + +V+++ EQ
Sbjct: 827 SQTRAAQAVSVERRTEQ 843
>gi|413934411|gb|AFW68962.1| hypothetical protein ZEAMMB73_667161 [Zea mays]
Length = 1399
Score = 262 bits (670), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 137/307 (44%), Positives = 185/307 (60%), Gaps = 8/307 (2%)
Query: 451 RDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQ 510
R S+ ++ NEA IV +T+S SG L S+L HGFD+V+IDEAAQA E L PLA G +
Sbjct: 993 RASLEASFANEAEIVFTTVSSSGRKLFSRLTHGFDMVVIDEAAQASEVGVLPPLALGAAR 1052
Query: 511 VFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREF 570
LVGDP QLPATVIS A L Y SLF+R Q+AG P +L QYRMHP++R FPS+ F
Sbjct: 1053 CVLVGDPQQLPATVISKAAGTLLYSRSLFERFQQAGCPTILLSVQYRMHPQIREFPSKYF 1112
Query: 571 YDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
Y L D V ++ P+ F+D+ G+ES GS S+ NI E F L L+
Sbjct: 1113 YQGRLTDSESVVKLPDEAYYRDALMAPYIFYDLSHGRESHRGGSSSYQNIHEAQFALRLY 1172
Query: 631 HKLISMYPQLKSSS----QLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGR 686
L LK++ + II+PY+ Q+K Q FK+ E K + I TVD QG+
Sbjct: 1173 EHLQKF---LKANGAKKVSVGIITPYKLQLKCLQREFKDVMNTEEGKDIYINTVDAFQGQ 1229
Query: 687 EKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSA 746
E+D+ I SCVRAS+ +GF+AD RRMNV +TRA+ ++ VVG A+ L + + W +L+ A
Sbjct: 1230 ERDIIIMSCVRASN-HGVGFVADIRRMNVALTRARRALWVVGNANALMQSEDWASLIADA 1288
Query: 747 EKQDCLF 753
+ + C
Sbjct: 1289 KARKCFM 1295
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 110/433 (25%), Positives = 189/433 (43%), Gaps = 87/433 (20%)
Query: 54 VKDTYKDVDDYLATFEPLLFEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTY 113
V +++ ++Y+ FEPLLFEE +AQ+ +E +E D H+
Sbjct: 490 VPGSFESAEEYIRVFEPLLFEECRAQLYSSYEES----------LEAVGRDA-HVAVRVK 538
Query: 114 EADEVESISPNDLLLL----SKEEFKEGS----TFPTTYAFA---------------LVE 150
D E D+++L K FKEG +FP + A V
Sbjct: 539 TVDRRER-GWYDVVVLPIHEQKWNFKEGDVAILSFPRPGSAAQSGRSSRRAMGSNEDAVS 597
Query: 151 HCQANLLRLRMYLA-------GEVIHIN-KDAVKSQRLLNIHSLITSSVSAVEKRLFSLK 202
C + +R ++ G +IH D+ S N+ + + + +
Sbjct: 598 ECGRLVGTVRRHMPIDTRDPIGAIIHFYLGDSFDSNSEANVLNKLQPRST-----WYLTG 652
Query: 203 ICSLSTIAREYLALRSVG--SLPFKDLILSAS-EKSSGSQDQSWKIPGLL----HEYIKE 255
+ SL+T REY+AL + S+ ++ IL S E Q+Q +P +++
Sbjct: 653 LGSLATTQREYVALHAFRRLSVQMQNAILQPSPEHFPKYQEQPPVMPDCFTPNFADHLHR 712
Query: 256 NHNASQLEAIH-----------EGLLRK----AFVLIQGPPGTGKTQTILGLLSAILHAT 300
+ N QL AIH G+L+K F L+QGPPGTGKT T+ G+L+ ++H
Sbjct: 713 SFNGPQLSAIHWAATHTAAGTNNGVLKKQEPWPFTLVQGPPGTGKTHTVWGMLN-VIHLV 771
Query: 301 PARVHSKGGLREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNE 360
+ + L+++ PE +++ + S V A D ++ D F T +
Sbjct: 772 QYQHYYAALLKKL--APE--SYKQVSGSTSTSSETVAAGSIDELLQ-SMDQNLFRTLP-K 825
Query: 361 LKPEVVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAH-H 419
L P + R+LVCAPSN+A DE++ R+L+ G D ++ Y P + R+G+ +
Sbjct: 826 LCP---------KPRMLVCAPSNAATDELLARVLDRGFIDGEMKVYRPDVARVGVDSQSR 876
Query: 420 SVNSVAIDHLVEQ 432
+ +V+++ +Q
Sbjct: 877 AAQAVSVERRTDQ 889
>gi|225678137|gb|EEH16421.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 2216
Score = 262 bits (670), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 136/315 (43%), Positives = 194/315 (61%), Gaps = 7/315 (2%)
Query: 436 DSAADKQKHGATRKD--RDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAA 493
D A D A D R I+ IL +A ++C+TLS SG + L+ F+ VIIDEAA
Sbjct: 1505 DDARDSNLVAARNADLLRRKIQQNILEDAHVLCATLSGSGHEMFQSLDIEFETVIIDEAA 1564
Query: 494 QAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYP--VKM 551
Q++E + L+PL GC + LVGDP QLP TV+S VA Y SLF R+Q A +P V +
Sbjct: 1565 QSIELSALIPLKYGCSKCILVGDPKQLPPTVLSKVASRFQYEQSLFVRMQ-ANHPQDVHL 1623
Query: 552 LKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQP 611
L TQYRMHPE+ FPS FYD L+DG D++ +R WH+ GP+ FFD+ S P
Sbjct: 1624 LDTQYRMHPEISRFPSAAFYDGRLQDGPDMDKLRSRIWHKSELLGPYRFFDVQGLHSSAP 1683
Query: 612 AGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVES 671
G S +N+ EV + L+ +L + + ++++ II+PY+ Q+++ + +F +G
Sbjct: 1684 KGH-SLVNLAEVRVAMKLYERLTTDFKIYDFTNKIGIITPYKGQLREMKNQFANKYGSSI 1742
Query: 672 QKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCAS 731
+++ T D QGRE ++ IFSCVRASD + IGFLAD RRMNVG+TRAKSS+ V+G +
Sbjct: 1743 FTMIEFNTTDAFQGRECEIIIFSCVRASD-RGIGFLADIRRMNVGLTRAKSSLWVLGSSK 1801
Query: 732 TLREDKHWNNLVKSA 746
+L + + W L+ A
Sbjct: 1802 SLVQGEFWRGLISDA 1816
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 125/290 (43%), Gaps = 53/290 (18%)
Query: 19 KIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKA 78
K +LGWD+F D + G+ V +T+ D DY TF+PLL EV
Sbjct: 1091 KTLLGWDFF---------ADGDIPPAS-GRTDYTLVSNTFSDATDYQKTFQPLLILEVWQ 1140
Query: 79 QIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADEVE--SISPNDLLLLSKEEFKE 136
K+E + +++++ D F + EV+ + DL+L+SK
Sbjct: 1141 SFQSAKEEGSFRPFEIKVSSRI-TVDSFVEVTTFMRPAEVKDLGLGEADLVLISKSS--- 1196
Query: 137 GSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSAVEK 196
+ + HC A ++ K ++ LN+ + + S + A
Sbjct: 1197 -----DPSSDSKEPHCLARIISSTK---------KKGMIEVGYRLNVSTPLNSFI-APGN 1241
Query: 197 RLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIKEN 256
LF++++ SL+ + REY +L ++ + ILSA P + +Y E+
Sbjct: 1242 SLFAVRVMSLTPVEREYGSLLALKYYDLSEEILSAR-------------PSPILKYTPES 1288
Query: 257 H---------NASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAIL 297
N +Q +A+ L AF LIQGPPG+GKT+TI+ L+ A+L
Sbjct: 1289 LQPIIDTYKVNPAQAKAVRSALDNDAFTLIQGPPGSGKTKTIIALVGALL 1338
>gi|226287635|gb|EEH43148.1| DEAD-box type RNA helicase [Paracoccidioides brasiliensis Pb18]
Length = 2162
Score = 262 bits (669), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 136/315 (43%), Positives = 194/315 (61%), Gaps = 7/315 (2%)
Query: 436 DSAADKQKHGATRKD--RDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAA 493
D A D A D R I+ IL +A ++C+TLS SG + L+ F+ VIIDEAA
Sbjct: 1505 DDARDSNLVAARNADLLRRKIQQNILEDAHVLCATLSGSGHEMFQSLDIEFETVIIDEAA 1564
Query: 494 QAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYP--VKM 551
Q++E + L+PL GC + LVGDP QLP TV+S VA Y SLF R+Q A +P V +
Sbjct: 1565 QSIELSALIPLKYGCSKCILVGDPKQLPPTVLSKVASRFQYEQSLFVRMQ-ANHPQDVHL 1623
Query: 552 LKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQP 611
L TQYRMHPE+ FPS FYD L+DG D++ +R WH+ GP+ FFD+ S P
Sbjct: 1624 LDTQYRMHPEISRFPSAAFYDGRLQDGPDMDKLRSRIWHKSELLGPYRFFDVQGLHSSAP 1683
Query: 612 AGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVES 671
G S +N+ EV + L+ +L + + ++++ II+PY+ Q+++ + +F +G
Sbjct: 1684 KGH-SLVNLAEVRVAMKLYERLTTDFKIYDFTNKIGIITPYKGQLREMKNQFANKYGSSI 1742
Query: 672 QKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCAS 731
+++ T D QGRE ++ IFSCVRASD + IGFLAD RRMNVG+TRAKSS+ V+G +
Sbjct: 1743 FTMIEFNTTDAFQGRECEIIIFSCVRASD-RGIGFLADIRRMNVGLTRAKSSLWVLGSSK 1801
Query: 732 TLREDKHWNNLVKSA 746
+L + + W L+ A
Sbjct: 1802 SLVQGEFWRGLINDA 1816
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 125/290 (43%), Gaps = 53/290 (18%)
Query: 19 KIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKA 78
K +LGWD+F D + G+ V +T+ D DY TF+PLL EV
Sbjct: 1091 KTLLGWDFF---------ADGDIPPAS-GRTDYTLVSNTFSDATDYRKTFQPLLILEVWQ 1140
Query: 79 QIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADEVE--SISPNDLLLLSKEEFKE 136
K+E + +++++ D F + EV+ + DL+L+SK
Sbjct: 1141 SFQSAKEEGSFRPFEIKVSSRI-TVDSFVEVTTFMRPAEVKDLGLGEADLVLISKSS--- 1196
Query: 137 GSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSAVEK 196
+ + HC A ++ K ++ LN+ + + S + A
Sbjct: 1197 -----DPSSDSKEPHCLARIISSTK---------KKGMIEVGYRLNVSTPLNSFI-APGN 1241
Query: 197 RLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIKEN 256
LF++++ SL+ + REY +L ++ + ILSA P + +Y E+
Sbjct: 1242 SLFAVRVMSLTPVEREYGSLLALKYYDLSEEILSAR-------------PSPILKYTPES 1288
Query: 257 H---------NASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAIL 297
N +Q +A+ L AF LIQGPPG+GKT+TI+ L+ A+L
Sbjct: 1289 LQPIIDTYKVNPAQAKAVRSALDNDAFTLIQGPPGSGKTKTIIALVGALL 1338
>gi|357154159|ref|XP_003576691.1| PREDICTED: uncharacterized protein LOC100835663 [Brachypodium
distachyon]
Length = 2045
Score = 262 bits (669), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 156/375 (41%), Positives = 214/375 (57%), Gaps = 39/375 (10%)
Query: 426 IDHLVEQKRDDSAADKQKHGATRKDRD-------SIRSAILNEAVIVCSTLSFSGSALLS 478
++ L QKR SA + + +K D +R +IL EA IV +TLS G +
Sbjct: 1308 LNILYTQKRAVSAELATAYASEKKIADENKSLKHKVRKSILGEAEIVVTTLSGCGGDIYG 1367
Query: 479 KLN-------------HG-FDVVIIDEAAQAVEPATLVPL----ATGCKQVFLVGDPVQL 520
+ HG FDVV+IDEAAQA+EPATL+PL + G K +VGDP QL
Sbjct: 1368 VCSETASAKKYGNFSEHGLFDVVVIDEAAQALEPATLIPLQLLKSKGTK-CIMVGDPKQL 1426
Query: 521 PATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSD 580
PATV+S +A Y S+F+RLQRAGYPV ML QYRMHP + FPS FY+ L DG
Sbjct: 1427 PATVMSGLASKFLYECSMFERLQRAGYPVIMLTKQYRMHPNISRFPSLHFYENKLLDGVQ 1486
Query: 581 VEDYTTRDWHEYRCFGPFSFFDIHEGKE--SQPAGSGSWINIDEVDFVLLLFHKLISMYP 638
+ + + +HE+ GP+ FFDI +G+E A + S N E D L + L + YP
Sbjct: 1487 MAEKSA-PFHEHNHLGPYMFFDIADGRERSGTNAATQSLCNQYEADAALEILSFLKNRYP 1545
Query: 639 QLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRA 698
S ++ II+PYR Q+ + RF FG E ++I TVDG QGRE D+ + S VRA
Sbjct: 1546 AEFSCRKIGIITPYRSQLSLLRSRFTSFFGPEIVAEMEINTVDGFQGREVDILVLSTVRA 1605
Query: 699 SDK----------KSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEK 748
S+ +SIGF+AD RRMNV +TRA+ S+ +VG A TL+ + HW +LV++A++
Sbjct: 1606 SNSSGDRHHAGEARSIGFVADVRRMNVALTRARFSLWIVGNARTLQTNSHWASLVQNAKE 1665
Query: 749 QDCLFRVSKPYASFF 763
++ V +PY F
Sbjct: 1666 RNMFISVERPYGLIF 1680
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 124/477 (25%), Positives = 207/477 (43%), Gaps = 89/477 (18%)
Query: 19 KIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKA 78
K IL DYF +V S K K L+E+ + Y+ F+PL+ EE KA
Sbjct: 838 KSILEMDYFAVVGLSSSEIIK--------KPALKEIPVCFDSQAQYVEIFQPLVIEEFKA 889
Query: 79 QIIQKKDEEEVQEWKLRLVMECG--------EADGFHLPSVTYEAD---EVESISPNDLL 127
Q+ E ++ M CG D F + E + + + NDL+
Sbjct: 890 QLQNAYVETPPED------MTCGSISILSVERVDEFLVVRGRAENSVCVKSKGCTENDLI 943
Query: 128 LLSKEEFKEGSTFPTTYAFALVEH-----CQANLLRLRMYLAGEVIHINKDAVKSQRLLN 182
L +K+ K S+ + V+ +A + +R +L+ E + +NK +RLL
Sbjct: 944 LFTKDPLK--SSGQQVHVLGKVDRRETDKNKALIFVIRFFLSNENVRLNK----VKRLL- 996
Query: 183 IHSLITSSVSAVEK-RLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQ 241
VE+ + F ++ S++ RE+ AL S+ +P +IL+ ++ + +
Sbjct: 997 -----------VERSKWFFSRVLSMTPQLREFSALSSLNDIPVLPVILNPVSSTATNHES 1045
Query: 242 SW----KIPGLLHEYIKENHNASQLEAIHEGL------LRKAFVLIQGPPGTGKTQTILG 291
K+ + + +K ++N SQL+A+ + ++ LIQGPPGTGKT+TI+
Sbjct: 1046 GKVYLDKLARPMRKVLKSSYNDSQLQAVSIAIGPTSSKMKCDLSLIQGPPGTGKTKTIVA 1105
Query: 292 LLSAILHATPARVHSKGGLREIKRGP------ELPMHEKYNHWGRASPWLVGANPRDNIM 345
++SA+L +H+ + GP P A W A + I
Sbjct: 1106 IVSALLS-----LHADSSYNLPRHGPLASAEFTKPRTRISQTAAVARAWQDAALAKQQI- 1159
Query: 346 PIDGDDGFFPTTGNELKPEVVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRS 405
+ + E + R + R LVCA SN+A+DE+V R L G+ D + +
Sbjct: 1160 -------------KDSQRENPRTERLSKGRALVCAQSNAAVDELVSR-LGDGLYDADGKL 1205
Query: 406 YTPKIVRIGLKAHHSVNSVA--IDHLVEQKRDD--SAADKQKHGATRKDRDSIRSAI 458
Y P IVR+G NS+ ID LVEQ+ D ++ K + K S+R+++
Sbjct: 1206 YRPYIVRVGNAKTVHPNSMPFFIDTLVEQRLSDELKTNNESKVSSDAKSSGSLRASL 1262
>gi|401399876|ref|XP_003880657.1| hypothetical protein NCLIV_010920 [Neospora caninum Liverpool]
gi|325115068|emb|CBZ50624.1| hypothetical protein NCLIV_010920 [Neospora caninum Liverpool]
Length = 1244
Score = 261 bits (668), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 156/415 (37%), Positives = 223/415 (53%), Gaps = 43/415 (10%)
Query: 375 RVLVCAPSNSALDEIVLRLL-----NTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHL 429
RVLVCAPSN+A+DEI+ RL+ GI D + YTP +VR+G H + ++++
Sbjct: 782 RVLVCAPSNAAIDEILKRLVAEPSKGGGIFDSQGKRYTPSVVRVGPNVHPDLVHYSLEYK 841
Query: 430 VEQKRDDSAADKQKHGATR-KDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVI 488
Q + GAT +I++ IL E+ IVC+TLS G ++ FD V+
Sbjct: 842 ANQL-------MKAKGATHFSALAAIKAEILQESRIVCATLSVCGCRDIAAATEAFDTVV 894
Query: 489 IDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYP 548
IDEA+Q VE +TL+PL GC+++ LVGDP QLPAT+ S VA Y SLF+RL+ AG+
Sbjct: 895 IDEASQGVEMSTLIPLRLGCRRLILVGDPRQLPATIFSRVAIQHRYDQSLFQRLEAAGHK 954
Query: 549 VKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR--DWHEYRCFGPFSFFDIHEG 606
V ML QYRMHP + F S FY L+D ++ W+ F P FF I+
Sbjct: 955 VNMLSVQYRMHPCISKFASSTFYQNQLQDAENIVGLVRPPIPWYSIPIFKPLVFFAINTS 1014
Query: 607 KESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSS---SQLAIISPYRHQVKQFQERF 663
+ + S +N+DE +FV L L ++ L + ++A+ISPY QV ++R
Sbjct: 1015 HTEE---NTSLVNVDEANFVCQLVDLLKRIFVALGQTDWEGKVAVISPYAQQVSLLRQRI 1071
Query: 664 KETFGVESQK--VVDITTVDGCQGREKDVAIFSCVRASDKK----------SIGFLADYR 711
K + K +D+ TVDG QG+EKD+ IFS VRA SIGFLAD R
Sbjct: 1072 KAQLRITDNKPCPIDVNTVDGFQGQEKDLIIFSAVRAQYTSPTTAATKLDTSIGFLADER 1131
Query: 712 RMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRVSKPYASFFSDE 766
R+NV +TR ++++ +VG L + HW CL++ +K + S E
Sbjct: 1132 RINVALTRGRTNLWIVGNGRFLMSNHHWR----------CLWKYTKELGTLISIE 1176
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 43/67 (64%)
Query: 233 EKSSGSQDQSWKIPGLLHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGL 292
+ S+ S Q I L E + + +N SQL+A+++ L + LIQGPPGTGKT TI+ +
Sbjct: 591 DASALSTRQKLFISSKLRESLHQLYNTSQLDALNDCLKIQGVTLIQGPPGTGKTTTIMAV 650
Query: 293 LSAILHA 299
+S +L+A
Sbjct: 651 ISVVLNA 657
>gi|302766237|ref|XP_002966539.1| hypothetical protein SELMODRAFT_407541 [Selaginella moellendorffii]
gi|300165959|gb|EFJ32566.1| hypothetical protein SELMODRAFT_407541 [Selaginella moellendorffii]
Length = 1030
Score = 261 bits (668), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 239/749 (31%), Positives = 339/749 (45%), Gaps = 152/749 (20%)
Query: 51 LREVKDTYKDVDDYLATFEPLLFEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGFHLPS 110
L EV T++ YL F PL FEE KA + + + ++ + + FHL
Sbjct: 155 LLEVPLTFQSYKHYLEIFRPLCFEEFKAHLERSLETMDLSRSDVVTAFSLRQEGYFHL-- 212
Query: 111 VTYEADEVESISPNDLLLLSKEEFKEGSTFPTTYAFALVEHCQANLLRLRMYLAGE-VIH 169
V ++ VE N+LL+ + H L +LR L E H
Sbjct: 213 VEFDGHTVEK--RNNLLVK-----------------VYLPHSCERLSKLREMLVTESTWH 253
Query: 170 INKDAVKSQRLLNIHSLITSSVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLIL 229
+NK + S++T RE A+ ++ P + IL
Sbjct: 254 LNK------------------------------LTSVTTFIREQQAMAAMHLFPLLETIL 283
Query: 230 SASEKSSGSQDQSWKIPGLLHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTI 289
SAS S+ QS +P L ++ +N SQL +I + + LIQGPPGTGKT+TI
Sbjct: 284 SASPPREISRTQS--LPPQLRSKLRREYNESQLSSI-AAVADQMISLIQGPPGTGKTRTI 340
Query: 290 LGLLSAILHATPARVHSKGGLREIKRGPELPMHEKY-----NHWGRASPWLVGANPRDNI 344
LG++SA+L A + + G E HE NH RD +
Sbjct: 341 LGIVSALL----AHANEEAGKAE--------EHEMLDVLTDNH---------QTEFRDKL 379
Query: 345 MPIDGDDGFFPTTGNELKPEVVNSSRRYRVRVLVCAPSNSALDEIVLRLL--NTGIRD-- 400
G + G P +V RV A +D +V + + N G+ +
Sbjct: 380 KATRISHGVYNYDGGTYWPSIVRVGDTKRVHSQAMAVH---IDRLVAKRMAENAGVHNAH 436
Query: 401 --ENIRSYTPKIV--RIGLKAHHSVNSV----AIDHLV---EQKR----DDSAADKQKHG 445
+ +RS +++ L A V S +D L EQ+R + + ++HG
Sbjct: 437 SPQELRSKLDEVLGNMQALAAPAEVESQDGIPKLDKLAGLQEQQRLLLSELIKVENREHG 496
Query: 446 ----ATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHG------------FDVVII 489
+ RK + +++ +L EA +V +TLS G + S L FD VII
Sbjct: 497 FLMGSNRKKKQAMKLEVLREADVVLTTLSGCGGHIYSTLMEFIATRDAQAAEMLFDAVII 556
Query: 490 DEAAQAVEPATLVPL----ATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRA 545
DEAAQAVEP+TL+PL AT K + L+ DP QLPATV+S A L + S+F+
Sbjct: 557 DEAAQAVEPSTLIPLQLLKATRGKCI-LIRDPKQLPATVLSVPASRLLFDCSMFE----- 610
Query: 546 GYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPF------S 599
+PV ML TQYRMHPE+RSFPS +YD L+DGS V H R PF
Sbjct: 611 SFPVSMLTTQYRMHPEIRSFPSTHYYDGQLKDGSTV-------LHGNRS-APFHRESHTG 662
Query: 600 FFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQF 659
FFDI +G+E +P S N DE +F+ L L Y + ++ +I+PY+ Q K
Sbjct: 663 FFDIRDGQE-RPGSMQSLTNPDEAEFIFQLLRVLKERYLEEVRPGRIGVITPYQEQRKVL 721
Query: 660 QERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRAS---DKKSIGFLADYRRMNVG 716
QE + +D+ TVD QGRE D+ + S VRAS + +GFLAD RRMNV
Sbjct: 722 QENMRSL-----HSGIDVNTVDSFQGREADIIVLSTVRASFGDSQAGVGFLADVRRMNVA 776
Query: 717 ITRAKSSILVVGCASTLREDKHWNNLVKS 745
+TRAK S+ VVG A TL + W L K+
Sbjct: 777 LTRAKFSLWVVGNARTLERNPDWKALPKT 805
>gi|453088648|gb|EMF16688.1| hypothetical protein SEPMUDRAFT_122176 [Mycosphaerella populorum
SO2202]
Length = 2003
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 135/322 (41%), Positives = 195/322 (60%), Gaps = 6/322 (1%)
Query: 433 KRDDSAADKQKHGATRK--DRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIID 490
+R DS D +K + +R + A+L+EA ++C+TLS SG + S L+ F+ VIID
Sbjct: 1473 QRIDSVKDNEKSAGREQELNRKRAQQAVLDEAHVICATLSGSGHDMFSGLSIEFETVIID 1532
Query: 491 EAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYP-- 548
EAAQ VE ++L+PL GC + +VGDP QLP TV S A Y SLF R+Q +P
Sbjct: 1533 EAAQCVEMSSLIPLKYGCVKCVMVGDPKQLPPTVFSKEAAKFQYEQSLFVRMQN-NHPKD 1591
Query: 549 VKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKE 608
V +L TQYRMHP++ FPSR FYD L+DG + + + WH P+ FFD+
Sbjct: 1592 VHLLDTQYRMHPDISVFPSRTFYDGLLKDGPSMANLRKQPWHASSLLAPYRFFDVAGQHS 1651
Query: 609 SQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFG 668
S P G+ S +N E++ ++L+ +L + +P + ++ II Y+ Q+++ + F FG
Sbjct: 1652 SAPRGN-SLVNKAEIEVAIMLYTRLRTDFPTYDFTGKIGIIVTYKAQLREMKGTFISKFG 1710
Query: 669 VESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVG 728
+ ++ T D QGRE ++ IFSCVRAS +IGFL D RRMNVG+TRAKSS+ V+G
Sbjct: 1711 PDIADYIEFNTTDAFQGRESEIIIFSCVRASPAGTIGFLQDIRRMNVGLTRAKSSLWVLG 1770
Query: 729 CASTLREDKHWNNLVKSAEKQD 750
ASTL ++W LV A+ +D
Sbjct: 1771 NASTLSSGRYWKKLVDDAKGRD 1792
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 111/440 (25%), Positives = 195/440 (44%), Gaps = 100/440 (22%)
Query: 19 KIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKA 78
+++L W++F Q NS + + + V D+++D Y TFEPLL E
Sbjct: 1062 RLMLSWEFFH-----QGDYPPNSNEHEFAR-----VVDSFRDPSMYQQTFEPLLILEAWQ 1111
Query: 79 QIIQKKDE--EEVQEWKLRLVMECGEADGFHLPS-VTYEADEVESISPNDLLLLSKEEFK 135
+++ ++E + + +++++ + S + ++ + + +S D++L SK +
Sbjct: 1112 GMVRAREELRDTTKPYEIKIQNRSNVDQFIEVSSFIGHQENRDQQLSEGDIILFSKGKRP 1171
Query: 136 EGSTFPTTYAFALVE---HCQANLLRLRMYLAG-EVIHINKDAVKSQRLLNIHSLITSSV 191
A+ E HC A + R++ A E+++ L + ++I
Sbjct: 1172 -----------AVDENEPHCLARVYRVKRQKAHLEIVYQVMPGTSLAPQLIMQTII---- 1216
Query: 192 SAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHE 251
F LK+ S++ + REY ALR + + I+ A + S+ ++
Sbjct: 1217 -------FGLKLQSITPLEREYGALRGLLYYDLCNQIIRA-KPSTKINFSDRQVANFRDV 1268
Query: 252 YIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTIL----GLLSAILHATPARVHSK 307
Y N +Q EA++ L + F LIQGPPG+GKT+TI+ GLL+ +L P
Sbjct: 1269 Y---ELNTAQSEAVNGALENEGFSLIQGPPGSGKTKTIVAIVGGLLTQVLKNAPR----- 1320
Query: 308 GGLREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVN 367
GL +I + P L G +G G P
Sbjct: 1321 -GLHKI-----------------SMPALGGHG--------NGASGDAPAK---------- 1344
Query: 368 SSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHS--VNSVA 425
++LVCAPSN+A+DE+VLRL+ G++ ++ + K+VRIG S V V
Sbjct: 1345 -------KLLVCAPSNAAVDELVLRLMK-GVKSKDGTHHDIKVVRIGRSEAISAQVADVT 1396
Query: 426 IDHLVEQK--RDDSAADKQK 443
++ LV+QK ++A DKQ+
Sbjct: 1397 METLVQQKIGGSNAADDKQR 1416
>gi|254579116|ref|XP_002495544.1| ZYRO0B13860p [Zygosaccharomyces rouxii]
gi|238938434|emb|CAR26611.1| ZYRO0B13860p [Zygosaccharomyces rouxii]
Length = 2130
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 127/304 (41%), Positives = 189/304 (62%), Gaps = 2/304 (0%)
Query: 450 DRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCK 509
DR + ++ L ++ I+CSTLS S +LS L FD VIIDEA Q E ++++PL G +
Sbjct: 1516 DRRNAQARTLAKSDIICSTLSGSAHDVLSSLGVKFDTVIIDEACQCTELSSIIPLRYGGR 1575
Query: 510 QVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSRE 569
+ +VGDP QLP TV+S A Y SLF R+++ P +L QYRMH + FPS E
Sbjct: 1576 RCIMVGDPNQLPPTVLSGAASSFKYNQSLFVRMEKNITPY-LLDVQYRMHSSISKFPSME 1634
Query: 570 FYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLL 629
FY L+DG +V+ R WHE + P+ FFDI G+E Q A + S++N+DE+ + L
Sbjct: 1635 FYKSRLKDGPEVDTLNQRPWHELKYSRPYKFFDILTGREQQSAKTMSYVNLDEIKVAMEL 1694
Query: 630 FHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKD 689
L + ++ +S++ +ISPY+ Q + + F FG + VD T+DG QG+EK+
Sbjct: 1695 VEYLFHKFDKIDFTSKIGVISPYKEQASRMRREFLSRFGGTITREVDFNTIDGFQGQEKE 1754
Query: 690 VAIFSCVRASD-KKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEK 748
+ I SCVRA D K S+GFL D+RRMNV +TRAK+S+ ++G +L ++K WN L+ A++
Sbjct: 1755 IIIISCVRADDTKSSVGFLRDFRRMNVALTRAKTSMWILGHQKSLVKNKLWNRLITDAQQ 1814
Query: 749 QDCL 752
+ C+
Sbjct: 1815 RGCM 1818
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 116/439 (26%), Positives = 185/439 (42%), Gaps = 97/439 (22%)
Query: 17 FCKIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEV 76
F + IL WDY R S E D N K ++KD +K V +Y PLL E
Sbjct: 1081 FYESILQWDYCR----SDEYPDDNIKD------HCADLKDEFKSVSEYQKIVRPLLLLEC 1130
Query: 77 KAQIIQKKDEEEVQEWKLRLVMECGEADGFHL-PSVTYEADEVESISPNDLLLLS----- 130
+ +D + + + + + +D + + SV+ + + +I+ +DL++L+
Sbjct: 1131 WQGLCSARDRGDFRPFSIIVGNRTAVSDFYEVYASVSKKKLQESNITDSDLIVLAYFPNN 1190
Query: 131 -------KEEFKEGSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNI 183
E+FK + + C A + L+ G+ I + ++ +
Sbjct: 1191 VPGGGYKNEDFKHAT-----------DTCLAKVRTLK-NTKGDNIDLTLRVHRNHKFAKF 1238
Query: 184 HSLITSSVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSW 243
+L S + AV KI ++T+ REY +L ++ + IL A K + D S
Sbjct: 1239 LTL-RSEIHAV-------KIMQMTTVEREYTSLEALEYYDLVEQILRA--KPTPQMDVSQ 1288
Query: 244 KIPGLLHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPAR 303
L+ + K N N SQ AI +L++ F LIQGPPGTGKT+TILG++ L +
Sbjct: 1289 AEIDLIKK--KYNLNLSQAAAIVNTVLKEGFSLIQGPPGTGKTKTILGIVGYFLSTRSS- 1345
Query: 304 VHSKGGLREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKP 363
LP N + G D TT LK
Sbjct: 1346 ---------------LP---------------------SNAIKTPGADSSNMTTDQLLKK 1369
Query: 364 EVVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNS 423
+ +VL+CAPSN+A+DEIVLR L G+ ++ + P IVR+G +VN+
Sbjct: 1370 Q----------KVLICAPSNAAVDEIVLR-LKEGVCNKEGMLFKPNIVRVG--RSDAVNA 1416
Query: 424 VAIDHLVEQKRDDSAADKQ 442
D +E+ D + K
Sbjct: 1417 AIKDFTLEELVDKQVSQKN 1435
>gi|334182633|ref|NP_173124.2| hydrolase domain-containing protein [Arabidopsis thaliana]
gi|332191377|gb|AEE29498.1| hydrolase domain-containing protein [Arabidopsis thaliana]
Length = 2127
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 152/378 (40%), Positives = 213/378 (56%), Gaps = 34/378 (8%)
Query: 424 VAIDHLVEQKR----DDSAADKQKHGAT---RKDRDSIRSAILNEAVIVCSTLSFSGSAL 476
+ + L EQKR D SA Q+ A R + +R +IL EA IV +TLS G L
Sbjct: 1536 IRLRRLYEQKRKIYKDLSAVQAQERKANYEMRTLKQKLRKSILKEAQIVVTTLSGCGGDL 1595
Query: 477 LSKL--------------NHGFDVVIIDEAAQAVEPATLVPL----ATGCKQVFLVGDPV 518
S ++ FD V+IDEAAQA+EPATL+PL + G K +VGDP
Sbjct: 1596 YSVCAESLAAHKFGSPSEDNLFDAVVIDEAAQALEPATLIPLQLLKSRGTK-CIMVGDPK 1654
Query: 519 QLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDG 578
QLPATV+S VA Y S+F+RLQRAGYP+ ML QYRMHPE+ FPS FYD L +G
Sbjct: 1655 QLPATVLSNVASKFLYECSMFERLQRAGYPILMLTQQYRMHPEICRFPSMHFYDNKLLNG 1714
Query: 579 SDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYP 638
D+ + +HE GP+ F+DI +G+E + S S N E + + L YP
Sbjct: 1715 VDMSSKSA-PFHENHHLGPYVFYDIVDGQEHRSGDSSSVCNEQEAEAAVQLLRFFKKRYP 1773
Query: 639 QLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRA 698
+ ++ II+PY+ Q+ + RF FG + +++ TVDG QG+E D+ + S VRA
Sbjct: 1774 SEFVAGRIGIITPYKRQLAVLRSRFTGAFGAQVTADMEMNTVDGFQGKEVDILVLSTVRA 1833
Query: 699 S-------DKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDC 751
+ ++ IGF+AD RRMNV +TRAK S+ V+G TL+ D +W LVK A++++
Sbjct: 1834 THSAPDGVNQSRIGFVADVRRMNVALTRAKLSLWVLGNTRTLQRDHNWGALVKDAKEREV 1893
Query: 752 LFRVSKPYASFFSDENLE 769
+ V +PY F + +E
Sbjct: 1894 IIPVKRPYNYMFGENVME 1911
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 128/465 (27%), Positives = 215/465 (46%), Gaps = 68/465 (14%)
Query: 21 ILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKAQI 80
IL DY+ +V + + D++ + GK REV + + Y+ F+PL+ EE KAQ+
Sbjct: 1061 ILQMDYYAIVGLASTKKDESQ---NVGKF--REVPVRFGSPEQYIQIFQPLVLEEFKAQL 1115
Query: 81 ---IQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADE-----VESISPNDLLLLSKE 132
Q+ E + + V+ D FH V + DE +S S NDL+L +KE
Sbjct: 1116 QSSFQEISSLEEIYYGVISVLSIERVDDFHF--VRFMQDENDGSNSKSFSENDLVLFTKE 1173
Query: 133 EFKEGSTFPTTYAFALV-----EHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLI 187
E S + + + ++L +R+YL +N+ ++R L S
Sbjct: 1174 H-PENSNVGVNMMGKVEGREWDDKKRTSILNVRLYLQNASSRLNQ----ARRNLLERSQW 1228
Query: 188 TSSVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILS----ASEKSSGSQDQSW 243
+S +I ++++ RE+ AL + +P LILS ++ S +
Sbjct: 1229 HAS-----------RILNITSQIREFQALSCIKDIPVLPLILSPMNDSNYDSEVKRSDLR 1277
Query: 244 KIPGLLHEYIKENHNASQLEAIHEGL----LRKAF--VLIQGPPGTGKTQTILGLLSAIL 297
+P L + +K + N SQL+AI + L KAF LIQGPPGTGKT+TI+ ++S +L
Sbjct: 1278 SLPHSLQQILKSSFNESQLQAISVAIGSSNLMKAFDISLIQGPPGTGKTRTIVAIISGLL 1337
Query: 298 HATPARVHSKGGLREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTT 357
+ + RG P H +S G NP + D
Sbjct: 1338 ASASHKTSD--------RGNSEPGHS-------SSTSRQGMNPSVAVARAWQDAALAKQL 1382
Query: 358 GNELKPEVVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIG-LK 416
+ + + + R RVL+CA SN+A+DE+V R+ + GI + + + P +VR+G K
Sbjct: 1383 NDNSETNRKIAEKNGRGRVLICAQSNAAVDELVSRISSLGIYGRDGKMFKPYLVRVGNAK 1442
Query: 417 AHHSVNSVA--IDHLVEQKRDDSAADKQKHGATRKDRDSIRSAIL 459
HS NS+ +D LV+Q+ A ++ + ++ ++ + SA+L
Sbjct: 1443 TVHS-NSMPFFLDTLVDQRL---AEERMRINESKSNKGADSSALL 1483
>gi|414868096|tpg|DAA46653.1| TPA: hypothetical protein ZEAMMB73_170269 [Zea mays]
Length = 809
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 137/307 (44%), Positives = 186/307 (60%), Gaps = 8/307 (2%)
Query: 451 RDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQ 510
R S+ ++ NEA IV +T+S SG L S+L+HGFD+V+IDEAAQA E L PLA G +
Sbjct: 405 RASLEASFANEAEIVFTTVSSSGRKLFSRLSHGFDMVVIDEAAQASEVGVLPPLALGAAR 464
Query: 511 VFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREF 570
LVGDP QLPATVIS A L Y SLF+R Q+AG P +L QYRMHP++R FPS+ F
Sbjct: 465 CVLVGDPQQLPATVISKAAGTLLYSRSLFERFQQAGCPTILLSVQYRMHPQIREFPSKYF 524
Query: 571 YDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
Y L D V ++ P+ F+D+ G+ES GS S+ NI E F L L+
Sbjct: 525 YQGRLTDSESVVKLPDEAYYRDALMAPYIFYDMSHGRESHRGGSSSYQNIHEAQFALRLY 584
Query: 631 HKLISMYPQLKSSS----QLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGR 686
L LK++ + II+PY+ Q+K Q FK+ E K + I TVD QG+
Sbjct: 585 EHLQKF---LKANGAKKVSVGIITPYKLQLKCLQREFKDVMNTEEGKDIYINTVDAFQGQ 641
Query: 687 EKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSA 746
E+D+ I SCVRAS+ +GF+AD RRMNV +TRA+ ++ VVG A+ L + + W +L+ A
Sbjct: 642 ERDIIIMSCVRASN-HGVGFVADIRRMNVALTRARRALWVVGNANALMQSEDWASLIADA 700
Query: 747 EKQDCLF 753
+ + C
Sbjct: 701 KARKCFM 707
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 123/261 (47%), Gaps = 43/261 (16%)
Query: 203 ICSLSTIAREYLALRSVGSLP--FKDLILSAS-EKSSGSQDQSWKIPGLLH----EYIKE 255
+ SL+T REY+AL + L ++ IL S E Q+Q IP +++
Sbjct: 65 LGSLATTQREYVALHAFRRLSVLMQNAILQPSPEHFPKYQEQPPAIPDCFTPNFVDHLHR 124
Query: 256 NHNASQLEAIH-----------EGLLRK----AFVLIQGPPGTGKTQTILGLLSAILHAT 300
+ N QL AIH G+++K F L+QGPPGTGKT T+ G+L+ ++H
Sbjct: 125 SFNGPQLSAIHWAATHTAAGTSNGVVKKQEPWPFTLVQGPPGTGKTHTVWGMLN-VIHLV 183
Query: 301 PARVHSKGGLREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNE 360
+ + L+++ PE +++ + S V A D ++ D F T +
Sbjct: 184 QYQHYYAALLKKL--APE--SYKQVSGSTSTSLETVAAGSIDELLQ-SMDQNLFRTL-PK 237
Query: 361 LKPEVVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHS 420
L P + R+LVCAPSN+A DE++ R+L+ G D ++ Y P + R+G+ +
Sbjct: 238 LCP---------KPRMLVCAPSNAATDELLARVLDRGFIDGEMKVYRPDVARVGVDSQSR 288
Query: 421 VNSVA-----IDHLVEQKRDD 436
V D L+ R+D
Sbjct: 289 AAQVVSVERRTDQLLLMGRED 309
>gi|320580258|gb|EFW94481.1| DEAD-box type RNA helicase [Ogataea parapolymorpha DL-1]
Length = 968
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 140/343 (40%), Positives = 199/343 (58%), Gaps = 11/343 (3%)
Query: 443 KHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLV 502
KH +R + + IL+ A +VCSTLS S +L+ ++ FD V+IDEAAQ +E + ++
Sbjct: 427 KHRNREIERRNAQFRILSSAEVVCSTLSGSAHDVLAGMSFTFDTVVIDEAAQCIELSAII 486
Query: 503 PLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRA-GYPVKMLKTQYRMHPE 561
PL G K+ +VGDP QLP TV+S A Y SLF R+Q V +L QYRMHPE
Sbjct: 487 PLRYGAKRCIMVGDPNQLPPTVLSQKAASFNYEQSLFVRMQNNHDNAVYLLNVQYRMHPE 546
Query: 562 VRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINID 621
+ FPS+EFYD L DGS + + T R WH + +GP+ FF+I EG Q + S N
Sbjct: 547 ISKFPSKEFYDSKLLDGSGMAEKTARPWHAIQEYGPYRFFNI-EGSHQQNEQTKSLYNYA 605
Query: 622 EVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVD 681
E L + L +++P + ++ IISPY+ Q++ +E F + FG K +D TVD
Sbjct: 606 EAKIALEIVSDLFALFPDEQWPGKIGIISPYKEQIRCIREVFVQKFGFPITKEIDFNTVD 665
Query: 682 GCQGREKDVAIFSCVRASDKKS-IGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWN 740
G QG+EKD+ +FSCVRA ++ S +GFL D RRMNV +TRA+SS+ V+G TL +K W
Sbjct: 666 GFQGQEKDIVLFSCVRAGEQNSGVGFLGDVRRMNVALTRARSSLWVLGSRETLMSNKTWR 725
Query: 741 NLVKSAEKQDCLFRVSKPYASFFSD-----ENLESMRKNATTD 778
+L+ ++ V++ Y F +N E RK D
Sbjct: 726 DLIDDLYERGL---VTRAYPGFTRKKGGLGDNYEPKRKKHKAD 765
Score = 47.4 bits (111), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 27/40 (67%)
Query: 258 NASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAIL 297
N SQ AI + + F LIQGPPGTGKT+TILG++ L
Sbjct: 315 NDSQARAIAGTVHKDGFSLIQGPPGTGKTKTILGIIGCAL 354
>gi|297850080|ref|XP_002892921.1| hypothetical protein ARALYDRAFT_312653 [Arabidopsis lyrata subsp.
lyrata]
gi|297338763|gb|EFH69180.1| hypothetical protein ARALYDRAFT_312653 [Arabidopsis lyrata subsp.
lyrata]
Length = 2129
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 155/378 (41%), Positives = 214/378 (56%), Gaps = 34/378 (8%)
Query: 424 VAIDHLVEQKR----DDSAADKQKHGAT---RKDRDSIRSAILNEAVIVCSTLSFSGSAL 476
+ + L EQKR D SA Q+ A R + +R +IL EA IV +TLS G L
Sbjct: 1441 IRLRRLYEQKRKIYKDLSAVQAQERKANYEMRALKHKLRKSILKEAQIVVTTLSGCGGDL 1500
Query: 477 -------LSKLNHG-------FDVVIIDEAAQAVEPATLVPL----ATGCKQVFLVGDPV 518
LS G FD V+IDEAAQA+EPATL+PL + G K +VGDP
Sbjct: 1501 YSVCAESLSAHKFGSPSEDNLFDAVVIDEAAQALEPATLIPLQLLKSRGTK-CIMVGDPK 1559
Query: 519 QLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDG 578
QLPATV+S VA Y S+F+RLQRAGYP+ ML QYRMHPE+ FPS FYD L +G
Sbjct: 1560 QLPATVLSNVASKFLYECSMFERLQRAGYPILMLTQQYRMHPEICRFPSMHFYDYKLLNG 1619
Query: 579 SDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYP 638
D+ + +HE GP+ F+DI +G+E + S S N E + + L YP
Sbjct: 1620 VDMSSKSA-PFHESHHLGPYVFYDIVDGQEHRSGDSSSVCNEQEAEAAVQLLRFFKKRYP 1678
Query: 639 QLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRA 698
+ ++ II+PY+ Q+ + RF FG + +++ TVDG QGRE D+ + S VRA
Sbjct: 1679 SEFVAGRIGIITPYKRQLAVLRSRFTGAFGAQVTADMEMNTVDGFQGREVDILVLSTVRA 1738
Query: 699 S-------DKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDC 751
+ ++ IGF+AD RRMNV +TRAK S+ V+G TL+ D +W LVK A++++
Sbjct: 1739 THSDPDGVNQSRIGFVADVRRMNVALTRAKLSLWVLGNTRTLQRDHNWGALVKDAKEREV 1798
Query: 752 LFRVSKPYASFFSDENLE 769
+ V +PY + F + +E
Sbjct: 1799 IIPVKRPYNNMFGEYVME 1816
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 126/440 (28%), Positives = 202/440 (45%), Gaps = 67/440 (15%)
Query: 21 ILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKAQI 80
IL DY+ +V + D+N + GK REV + + Y+ F+PL+ EE KAQ+
Sbjct: 966 ILQMDYYAIVGLASTNKDENQ---NVGKF--REVPVRFGSPEQYIQIFQPLVLEEFKAQL 1020
Query: 81 ---IQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADE-----VESISPNDLLLLSKE 132
Q+ E + + V+ D FH V + DE +S S NDL+L +KE
Sbjct: 1021 QSSFQEISSLEEIYYGVLSVLSIERVDDFHF--VRFMQDENDGSNSKSFSENDLVLFTKE 1078
Query: 133 EFKEGSTFPTTYAFALV-----EHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLI 187
E S + + ++++L +R+YL +N+ ++R L S
Sbjct: 1079 H-PESSNVGVNMMGKVEGREWDDKKRSSILNVRLYLQNASSRLNQ----ARRNLLERSQW 1133
Query: 188 TSSVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWK--- 244
+S +I ++++ RE+ AL S+ +P LILS KS + D K
Sbjct: 1134 HAS-----------RILNITSQIREFQALSSIKDIPILPLILSP--KSDSNYDSEVKRSD 1180
Query: 245 ---IPGLLHEYIKENHNASQLEAIHEGL----LRKAF--VLIQGPPGTGKTQTILGLLSA 295
+P L + +K + N SQL+AI + L KAF LIQGPPGTGKT+TI+ ++S
Sbjct: 1181 LRSLPHSLQQILKSSFNESQLQAISVAIGSSNLMKAFDISLIQGPPGTGKTRTIVAIISG 1240
Query: 296 ILHATPARVHSKGGLREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFP 355
+L + +H RG P H R +P + A D
Sbjct: 1241 LLASA---LHKASD-----RGNSEPDHSSSTSRQRMNPSVAIARAWQ-------DAALAK 1285
Query: 356 TTGNELKPEVVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGL 415
++ + + + R RVL+CA SN+A+DE+V R+ + GI + + + P +VR+G
Sbjct: 1286 QLNDDEETNKKIAEKNGRGRVLICAQSNAAVDELVSRISSLGIYGRDGKMFKPYLVRVGN 1345
Query: 416 KAHHSVNSVA--IDHLVEQK 433
NS+ +D LV+Q+
Sbjct: 1346 AKTVHPNSMPFFLDTLVDQR 1365
>gi|9954728|gb|AAG09081.1|AC026237_2 Similar to tRNA-splicing endonuclease positive effector SEN1
[Arabidopsis thaliana]
Length = 2142
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 152/378 (40%), Positives = 213/378 (56%), Gaps = 34/378 (8%)
Query: 424 VAIDHLVEQKR----DDSAADKQKHGAT---RKDRDSIRSAILNEAVIVCSTLSFSGSAL 476
+ + L EQKR D SA Q+ A R + +R +IL EA IV +TLS G L
Sbjct: 1442 IRLRRLYEQKRKIYKDLSAVQAQERKANYEMRTLKQKLRKSILKEAQIVVTTLSGCGGDL 1501
Query: 477 LSKL--------------NHGFDVVIIDEAAQAVEPATLVPL----ATGCKQVFLVGDPV 518
S ++ FD V+IDEAAQA+EPATL+PL + G K +VGDP
Sbjct: 1502 YSVCAESLAAHKFGSPSEDNLFDAVVIDEAAQALEPATLIPLQLLKSRGTK-CIMVGDPK 1560
Query: 519 QLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDG 578
QLPATV+S VA Y S+F+RLQRAGYP+ ML QYRMHPE+ FPS FYD L +G
Sbjct: 1561 QLPATVLSNVASKFLYECSMFERLQRAGYPILMLTQQYRMHPEICRFPSMHFYDNKLLNG 1620
Query: 579 SDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYP 638
D+ + +HE GP+ F+DI +G+E + S S N E + + L YP
Sbjct: 1621 VDMSSKSA-PFHENHHLGPYVFYDIVDGQEHRSGDSSSVCNEQEAEAAVQLLRFFKKRYP 1679
Query: 639 QLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRA 698
+ ++ II+PY+ Q+ + RF FG + +++ TVDG QG+E D+ + S VRA
Sbjct: 1680 SEFVAGRIGIITPYKRQLAVLRSRFTGAFGAQVTADMEMNTVDGFQGKEVDILVLSTVRA 1739
Query: 699 S-------DKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDC 751
+ ++ IGF+AD RRMNV +TRAK S+ V+G TL+ D +W LVK A++++
Sbjct: 1740 THSAPDGVNQSRIGFVADVRRMNVALTRAKLSLWVLGNTRTLQRDHNWGALVKDAKEREV 1799
Query: 752 LFRVSKPYASFFSDENLE 769
+ V +PY F + +E
Sbjct: 1800 IIPVKRPYNYMFGENVME 1817
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 128/465 (27%), Positives = 214/465 (46%), Gaps = 68/465 (14%)
Query: 21 ILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKAQI 80
IL DY+ +V + + D++ + GK REV + + Y+ F+PL+ EE KAQ+
Sbjct: 967 ILQMDYYAIVGLASTKKDESQ---NVGKF--REVPVRFGSPEQYIQIFQPLVLEEFKAQL 1021
Query: 81 ---IQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADE-----VESISPNDLLLLSKE 132
Q+ E + + V+ D FH V + DE +S S NDL+L +KE
Sbjct: 1022 QSSFQEISSLEEIYYGVISVLSIERVDDFHF--VRFMQDENDGSNSKSFSENDLVLFTKE 1079
Query: 133 EFKEGSTFPTTYAFALV-----EHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLI 187
E S + + + ++L +R+YL +N+ ++R L S
Sbjct: 1080 H-PENSNVGVNMMGKVEGREWDDKKRTSILNVRLYLQNASSRLNQ----ARRNLLERSQW 1134
Query: 188 TSSVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWK--- 244
+S +I ++++ RE+ AL + +P LILS S+ +
Sbjct: 1135 HAS-----------RILNITSQIREFQALSCIKDIPVLPLILSPMNDSNYDSEVKRSDLR 1183
Query: 245 -IPGLLHEYIKENHNASQLEAIHEGL----LRKAF--VLIQGPPGTGKTQTILGLLSAIL 297
+P L + +K + N SQL+AI + L KAF LIQGPPGTGKT+TI+ ++S +L
Sbjct: 1184 SLPHSLQQILKSSFNESQLQAISVAIGSSNLMKAFDISLIQGPPGTGKTRTIVAIISGLL 1243
Query: 298 HATPARVHSKGGLREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTT 357
+ + RG P H +S G NP + D
Sbjct: 1244 ASASHKTSD--------RGNSEPGHS-------SSTSRQGMNPSVAVARAWQDAALAKQL 1288
Query: 358 GNELKPEVVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIG-LK 416
+ + + + R RVL+CA SN+A+DE+V R+ + GI + + + P +VR+G K
Sbjct: 1289 NDNSETNRKIAEKNGRGRVLICAQSNAAVDELVSRISSLGIYGRDGKMFKPYLVRVGNAK 1348
Query: 417 AHHSVNSVA--IDHLVEQKRDDSAADKQKHGATRKDRDSIRSAIL 459
HS NS+ +D LV+Q+ A ++ + ++ ++ + SA+L
Sbjct: 1349 TVHS-NSMPFFLDTLVDQRL---AEERMRINESKSNKGADSSALL 1389
>gi|302499595|ref|XP_003011793.1| hypothetical protein ARB_02022 [Arthroderma benhamiae CBS 112371]
gi|291175346|gb|EFE31153.1| hypothetical protein ARB_02022 [Arthroderma benhamiae CBS 112371]
Length = 2117
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 153/394 (38%), Positives = 217/394 (55%), Gaps = 21/394 (5%)
Query: 436 DSAADKQKHGATRK---DRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEA 492
D+A DK H A R R I+ I++ A ++CSTLS SG + L+ F+ VIIDEA
Sbjct: 1501 DNARDKN-HAAARNAELTRRRIQQEIIDGAHVICSTLSGSGHEMFQSLSIEFETVIIDEA 1559
Query: 493 AQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYP--VK 550
AQ++E + L+PL GC + LVGDP QLP TV+S A Y SLF R+Q A +P V
Sbjct: 1560 AQSIELSALIPLKYGCSKCVLVGDPKQLPPTVLSKEASRFQYEQSLFVRMQ-ANHPNDVH 1618
Query: 551 MLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQ 610
+L TQYRMHPE+ FPS+ FYD L+DG + + WH GP+ FFD+ +G S
Sbjct: 1619 LLDTQYRMHPEISKFPSQAFYDGKLQDGPGMAPLRKKPWHGSELLGPYRFFDV-QGMHSS 1677
Query: 611 PAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVE 670
A S +NI E+ + L+ +L++ Y + ++ II+PY+ Q+++ + RF +G
Sbjct: 1678 AAKGHSLVNIAELTVAMRLYERLLADYRNYDFAGKIGIITPYKGQLRELKSRFAAKYGSS 1737
Query: 671 SQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCA 730
V+ T D QGRE +V IFSCVRASD + IGFL+D RRMNVG+TRAKSS+ V+G +
Sbjct: 1738 IFTAVEFNTTDAFQGRECEVIIFSCVRASD-RGIGFLSDIRRMNVGLTRAKSSLWVLGNS 1796
Query: 731 STLREDKHWNNLVKSA-EKQ-----DCLFRVSKPYASFFSDENLESMRKNATTDNVQGAD 784
+L + W L+ A E+Q D L + KP S + N N +
Sbjct: 1797 QSLVRGEFWRALIYDARERQLYTEGDILRILQKPQISLDMELN------NVEMVDAPAEV 1850
Query: 785 GHVPHDDETMHYANTGDADQGQADDIDNADGDAE 818
G++P + G ++ + N AE
Sbjct: 1851 GNIPTPSSRPGSSMAGSSNSRPPSRLSNPQSTAE 1884
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 108/434 (24%), Positives = 180/434 (41%), Gaps = 89/434 (20%)
Query: 19 KIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKA 78
K +L WD+F + G+ V + + + +Y TFEPLL E
Sbjct: 1097 KTLLSWDFF----------STTVLPPNCGRTDYTLVSNVFANALEYQKTFEPLLILEAWQ 1146
Query: 79 QIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADEVE--SISPNDLLLLSKEEFKE 136
+++ +E+++++ D F S E +V+ + DL+LLS+
Sbjct: 1147 GFQTAREDATFKEFEIKVANRLS-VDSFVEVSTIMEPQQVKDLGLGEADLVLLSR----- 1200
Query: 137 GSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSAVEK 196
S P T + A HC + +G I K V+ +N S +S
Sbjct: 1201 -SNKPATDSSA--PHCLGRI-------SG--IKKKKGTVEVSYRIN-PSGPMASGIGSGG 1247
Query: 197 RLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIKEN 256
LF +KI SL+ + REY AL ++ + I+ A + S + +L Y +
Sbjct: 1248 GLFGVKITSLTPLEREYGALMALQYYDLSEEIIRA-KPSPILNYGPESLKTILATY---D 1303
Query: 257 HNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLREIKRG 316
N +Q +AI + AF LIQGPPG+GKT+TI+ ++ A+L TP K
Sbjct: 1304 LNPAQAKAIKSAVDNDAFTLIQGPPGSGKTKTIVAIVGALL--TPILAERK--------- 1352
Query: 317 PELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNSSRRYRVRV 376
+P + + +AS + P ++
Sbjct: 1353 --VPQPKIASDSAQAS----KSTPSKKLL------------------------------- 1375
Query: 377 LVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVN--SVAIDHLVEQKR 434
VCAPSN+A+DE+V+R G++ N ++ ++R+G + N V +D LV K
Sbjct: 1376 -VCAPSNAAVDELVMR-FKEGVKTLNGKTQPISVIRLGRSDAINANVLDVTLDELVNAKL 1433
Query: 435 DDSAADKQKHGATR 448
+ S D++K+G R
Sbjct: 1434 NQS--DQKKNGEER 1445
>gi|356558781|ref|XP_003547681.1| PREDICTED: uncharacterized ATP-dependent helicase C29A10.10c-like
[Glycine max]
Length = 1328
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 137/304 (45%), Positives = 183/304 (60%), Gaps = 2/304 (0%)
Query: 451 RDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQ 510
R S+ ++ NEA IV +T+S SG L S+L+HGFD+V+IDEAAQA E A L PL+ G +
Sbjct: 912 RASLEASFANEAEIVFTTVSSSGRKLFSRLSHGFDMVVIDEAAQASEVAILPPLSLGAAR 971
Query: 511 VFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREF 570
LVGDP QLPATVIS A L Y SLF+R Q+AG P +L QYRMHP++R FPSR F
Sbjct: 972 CVLVGDPQQLPATVISKAAGTLMYSRSLFERFQQAGCPTMLLSVQYRMHPQIRDFPSRYF 1031
Query: 571 YDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
Y L D V +++ P+ F+DI G+ES GS S+ NI E F L L+
Sbjct: 1032 YQGRLTDSESVAKLPDEPYYKDPLLRPYIFYDIRHGRESHRGGSVSYQNIHEAQFCLRLY 1091
Query: 631 HKLISMYPQLK-SSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKD 689
+ L + II+PY+ Q+K Q F E E K + I TVD QG+E+D
Sbjct: 1092 EHVQKTVKSLGLGKITVGIITPYKLQLKCLQREFDEVLNSEEGKDLYINTVDAFQGQERD 1151
Query: 690 VAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQ 749
V I SCVRAS +GF+AD RRMNV +TRA+ ++ V+G A+ L + + W L+ A+ +
Sbjct: 1152 VIIMSCVRASS-HGVGFVADIRRMNVALTRARRALWVMGNANALLQSEDWAALINDAKSR 1210
Query: 750 DCLF 753
+C
Sbjct: 1211 NCYM 1214
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 118/255 (46%), Gaps = 46/255 (18%)
Query: 203 ICSLSTIAREYLALRSVG--SLPFKDLILSAS-EKSSGSQDQSWKIPGLLH----EYIKE 255
+ SL+T REY+AL + +L + IL S E + Q+ +P EY++
Sbjct: 575 LGSLATTQREYIALHAFRRLNLQMQTAILQPSPEHFPKYEQQTPAMPECFTQNFVEYLRR 634
Query: 256 NHNASQLEAIHEGLLRKA---------------FVLIQGPPGTGKTQTILGLLSAILHAT 300
N QL AI + A F L+QGPPGTGKT T+ G+L+ ++H
Sbjct: 635 TFNEPQLAAIQWAAMHTAAGTSSGTTKRQEPWPFTLVQGPPGTGKTHTVWGMLN-VIHLV 693
Query: 301 PARVHSKGGLREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNE 360
+ + L+ + PE +++ N DN D+ N
Sbjct: 694 QYQHYYTSLLKHV--APE--SYKQVNEINS-----------DNAPTGSIDEVLQNMDQNL 738
Query: 361 LK--PEVVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAH 418
L+ P++V + R+LVCAPSN+A DE++ R+L+ G D ++ Y P + R+G+ +
Sbjct: 739 LRTLPKLVP-----KPRMLVCAPSNAATDELLARVLDRGFIDGEMKVYRPDVARVGVDSQ 793
Query: 419 -HSVNSVAIDHLVEQ 432
+ +V+++ EQ
Sbjct: 794 TRAAQAVSVERRTEQ 808
>gi|321264612|ref|XP_003197023.1| hypothetical protein CGB_L2150W [Cryptococcus gattii WM276]
gi|317463501|gb|ADV25236.1| hypothetical protein CNBL1770 [Cryptococcus gattii WM276]
Length = 2184
Score = 259 bits (662), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 246/835 (29%), Positives = 365/835 (43%), Gaps = 217/835 (25%)
Query: 10 DEASIFRFCKIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFE 69
D +S++R+ IL WD + ++ + K +R V T+ + Y
Sbjct: 1242 DLSSLYRY---ILSWD-----PDHPGQSPPHGAKFSAELSDMRVVPTTFDNPKHYERIML 1293
Query: 70 PLLFEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADEVE---------- 119
PL +E+ +Q + ++ G A + S YE D VE
Sbjct: 1294 PLFLQELWSQCTNDQ-------------VQVGPAVPVEVASRQYEDDFVEIDLMVVGAGD 1340
Query: 120 -SISPNDLLLLSKEEFKEGSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQ 178
+ +DL+ L + +G F AF +H + +++R R+ V+ + KS+
Sbjct: 1341 FYCNDSDLVTLRQPNNPKG-IFAKIMAFK--KHPKGSMIRARIM---SVMDQKELCGKSK 1394
Query: 179 RLLNIHSLITSSVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGS 238
L H SLST RE+ AL+ LP+ + +S S
Sbjct: 1395 WQLRKH-------------------VSLSTSIREFAALKG---LPWYE----SSLLSDIM 1428
Query: 239 QDQSWKIPGLLHEYIKENH-----NASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLL 293
+S +P L E I++ N Q +A+ L + F LIQGPPGTGKT+TI G
Sbjct: 1429 GGRSAIMPKLSTEKIEDTMKCLSLNEPQAKAVLGALEVRGFALIQGPPGTGKTKTISG-- 1486
Query: 294 SAILHATPARVHSKGGLREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGF 353
LVG + +PI D
Sbjct: 1487 -----------------------------------------LVGKWMSERRIPISVDG-- 1503
Query: 354 FPTTGNELKPEVVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRI 413
+P V + ++LVCAPSN+A+DE+ RL+ G+ + + Y P IVR+
Sbjct: 1504 --------QPPV-------KPKLLVCAPSNAAIDEVCKRLI-LGVPNPDGGQYNPSIVRV 1547
Query: 414 GLKA--HHSVNSVAIDHLVE---------------------------QKRDDSAADK--Q 442
G+ A + +V V++D LVE Q +D A K Q
Sbjct: 1548 GIDASVNIAVKDVSLDSLVEVVVSNSSGRNIGGEYGRIQAELDDVKQQIKDKQEAIKLAQ 1607
Query: 443 KHG----------------------ATRKDRDSIRSA--------------ILNEAVIVC 466
H A+ K +D+ R A IL +A I+C
Sbjct: 1608 DHDEKRKVLENEYHALITRRTQLGQASSKAKDAARDATRHLDGARRAARDQILKDADIIC 1667
Query: 467 STLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVG----------- 515
+TLS +G L+ H F+ VIIDEAAQA+E + L+PL GCK+ +VG
Sbjct: 1668 ATLSGAGHDTLAA--HTFETVIIDEAAQAIEMSCLIPLKYGCKRCIMVGGNLILHPVSLT 1725
Query: 516 DPVQLPATVISPVAEHLGYGTSLFKRL-QRAGYPVKMLKTQYRMHPEVRSFPSREFYDEA 574
DP QLP T S AE L Y SLF R+ +R V++L QYRMHP + PS+ FY
Sbjct: 1726 DPNQLPPTTFSANAEKLQYNKSLFVRMTKRDASHVQLLSIQYRMHPFISELPSKVFYHGQ 1785
Query: 575 LEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLI 634
L+DG + T WH+ FGP+ FF+I EG E + S N E + L+ +L
Sbjct: 1786 LKDGPSMAKKTAAIWHQRNIFGPYRFFNI-EGTEMKTGTSTK--NPAEALAAVELYRRLN 1842
Query: 635 SMY-PQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIF 693
+ + ++ + ++ +IS YR Q+ + + +F E FG ++V+ TVDG QG+EKD+ I
Sbjct: 1843 ADFGTRVNLAMRIGVISMYREQLWELKRKFTEAFGSTILELVEFNTVDGFQGQEKDIIIL 1902
Query: 694 SCVRAS-DKKSIGFLADYRRMNVGITRAKSSILVVGCASTL-REDKHWNNLVKSA 746
SCVR+ + IGFL D RRMNV +TRAKSS+ + G TL R D+ W +V+ A
Sbjct: 1903 SCVRSGPNLNHIGFLKDTRRMNVALTRAKSSLFIFGNGPTLERSDERWKIIVQDA 1957
>gi|380485224|emb|CCF39497.1| helicase SEN1 [Colletotrichum higginsianum]
Length = 696
Score = 259 bits (662), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 160/453 (35%), Positives = 240/453 (52%), Gaps = 55/453 (12%)
Query: 352 GFFPTTGNELKPEVVNSSRRYRV--RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPK 409
G G +KP++V + + + ++LVCAPSN+A+DE+VLRL G++ N +
Sbjct: 8 GNIQAPGTAIKPKLVGQAGQNAMPKKLLVCAPSNAAVDELVLRL-KQGVKTMNGSFHKIN 66
Query: 410 IVRIGL-----------KAHHSVNSVAIDHLVEQKRDDSA---ADKQKHGATRKD----- 450
++R+G K H+ + D + R D+A D+ A ++D
Sbjct: 67 VLRLGDTTQSKAKEERDKMHNQAAKIRDDLAELRPRLDAARAAGDRTLSQALQRDFDQLK 126
Query: 451 ---------------------------RDSIRSAILNEAVIVCSTLSFSGSALLSKLNHG 483
R I+ IL+ A ++C+TLS SG + LN
Sbjct: 127 RSQINIGAKIDEDKASGNTVSREAEIRRRQIQQEILDGAQVLCATLSGSGHEMFKNLNVE 186
Query: 484 FDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQ 543
F+ VIIDEAAQ VE + L+PL GC + LVGDP QLP TV+S A GY SLF R+Q
Sbjct: 187 FETVIIDEAAQCVELSALIPLKYGCTKCILVGDPKQLPPTVLSQSAARFGYDQSLFVRMQ 246
Query: 544 RAGYP--VKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFF 601
+ +P V +L QYRMHPE+ FPS EFY+ L DG D+ + WH GP+ FF
Sbjct: 247 Q-NHPDHVHLLDRQYRMHPEISLFPSTEFYEGKLVDGEDMSALRRQPWHASALLGPYRFF 305
Query: 602 DIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQ-LKSSSQLAIISPYRHQVKQFQ 660
D+ EG +S+ + S +N E+ + L+ + + + + ++ II+PY+ Q+++ +
Sbjct: 306 DV-EGTQSKGSKGRSLVNHAELRVAMQLYERFKADFGRNYDIRGKIGIITPYKAQLQELK 364
Query: 661 ERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRA 720
+F FG ++ T D QGRE ++ IFSCVRA IGF+ D RRMNVG+TRA
Sbjct: 365 WQFSRQFGEAITDDIEFNTTDAFQGRECEIIIFSCVRADPTGGIGFVKDIRRMNVGLTRA 424
Query: 721 KSSILVVGCASTLREDKHWNNLVKSAEKQDCLF 753
KSS+ ++G + L + + WN L+ +A KQ L+
Sbjct: 425 KSSLWILGDSRALVQGEFWNKLITNA-KQRSLY 456
>gi|393243189|gb|EJD50704.1| hypothetical protein AURDEDRAFT_83748 [Auricularia delicata TFB-10046
SS5]
Length = 2008
Score = 259 bits (662), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 206/633 (32%), Positives = 301/633 (47%), Gaps = 87/633 (13%)
Query: 202 KICSLSTIAREYLALRSVGSLPFKDL---ILSASEKSSGSQDQSWKIPGLLHEYIKENH- 257
K+ SLST+ REY +L + LP+ DL IL A + D P + +K
Sbjct: 1261 KVFSLSTLNREYASLVA---LPYYDLSEHILQAHPAETRPYD-----PDEVRRTMKNQKV 1312
Query: 258 NASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLREIKRG- 316
N Q +AI F+L+QGPPGTGKT TI G++ A + P EI+ G
Sbjct: 1313 NEPQAKAILASKNAAGFLLVQGPPGTGKTWTICGMVGAFMSNRPKPA------TEIQAGR 1366
Query: 317 ---PELPMHEKYNHWGRASPWLVGANPRDNIMPIDGD--DGFFPTTGNELKPEVV----- 366
P H K L+ A I + DG ++G + P VV
Sbjct: 1367 AAAPASKPHPKK--------ILICAPSNAGIDEVAKRLCDGVLDSSGRRVVPNVVRIGVD 1418
Query: 367 ---NSSRR-----YRVRVLVCAP------SNSALDEIVLRL----LNTGIRDENIRSYTP 408
N+S + Y+V + P + +D LR + + + S
Sbjct: 1419 SSVNTSVKHLTLDYQVERKLAGPGAPTAKNEPQVDTNALRAELASVKAALEQKFDESNKL 1478
Query: 409 KIVRIGLKA-HHSVNSVAIDHLVEQKRDDSAADKQKHGATRKD--RDSIRSAILNEAVIV 465
+ + KA +N + ++ D+A DKQK D R R+ +L EA ++
Sbjct: 1479 QARQADTKAVQDQINILKSKRFAISQKLDNARDKQKAETRALDAARRKFRTEVLLEADVI 1538
Query: 466 CSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVI 525
CSTL+ +G L F+ V+IDEAAQ++E ++L+PL GCK+ +VGDP QLP TVI
Sbjct: 1539 CSTLAGAGHDTLETFE--FETVVIDEAAQSIELSSLIPLRYGCKRCVMVGDPQQLPPTVI 1596
Query: 526 SPVAEHLGYGTSLFKRL-QRAGYPVKMLK-------------------TQYRMHPEVRSF 565
S A H Y SLF R+ +R +L+ QYRMHP++
Sbjct: 1597 SKRATHFKYNQSLFVRIFERKPKAAHLLRHVPNSSHPHLCRTQRLHHSIQYRMHPDISLI 1656
Query: 566 PSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDF 625
PS+ FY L+DG D+ T + WH G + FF+I +G A S +N EVD
Sbjct: 1657 PSKLFYGGNLKDGPDMAAKTEQPWHASELLGTYRFFNIAQGHHENAAVGLSLVNRAEVDA 1716
Query: 626 VLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQG 685
L L+ +S Y S ++ +IS Y+ Q+ Q F+ +G + + +D TVDG QG
Sbjct: 1717 ALALYEAFLSQYSDQDMSHRIGVISMYKAQINALQRAFEGRYGADIKNKLDFNTVDGFQG 1776
Query: 686 REKDVAIFSCVRASDKKS-IGFLADYRRMNVGITRAKSSILVVGCASTL-REDKHWNNLV 743
+EKD+ I SCVRA + + IGF+ D RR+NV ITRA+SS+ ++G A+TL R D W +V
Sbjct: 1777 QEKDIIILSCVRAGPRVTDIGFVKDVRRLNVSITRARSSLFILGHAATLERGDDTWRQIV 1836
Query: 744 KSAEKQDCLFRVSKPYASFFSDENLESMRKNAT 776
+ A + L AS F + N ++R+N T
Sbjct: 1837 EDARARGFLVDAE---ASTFRNAN--AVRRNIT 1864
>gi|296823782|ref|XP_002850498.1| helicase SEN1 [Arthroderma otae CBS 113480]
gi|238838052|gb|EEQ27714.1| helicase SEN1 [Arthroderma otae CBS 113480]
Length = 1528
Score = 259 bits (662), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 137/320 (42%), Positives = 195/320 (60%), Gaps = 9/320 (2%)
Query: 436 DSAADKQKHGATRK---DRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEA 492
D+A DK H A R R I+ I++ A ++CSTLS SG + L+ F+ VIIDEA
Sbjct: 845 DNARDKN-HSAARNAELTRRRIQQEIIDGAHVICSTLSGSGHEMFQSLSIEFETVIIDEA 903
Query: 493 AQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYP--VK 550
AQ++E + L+PL GC + LVGDP QLP TV+S A Y SLF R+Q A +P V
Sbjct: 904 AQSIELSALIPLKYGCSKCVLVGDPKQLPPTVLSKEASRFQYEQSLFVRMQ-ANHPNDVH 962
Query: 551 MLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQ 610
+L TQYRMHPE+ FPS+ FYD L+DG + + WH GP+ FFD+ +G S
Sbjct: 963 LLDTQYRMHPEISKFPSQAFYDGKLQDGPGMGPLRKKPWHGSELLGPYRFFDV-QGMHSN 1021
Query: 611 PAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVE 670
A S +NI E+ + L+ +L++ Y + ++ II+PY+ Q+++ + RF +G
Sbjct: 1022 AAKGHSLVNIAELTVAMRLYDRLLADYKNYDFTGKIGIITPYKGQLRELKARFAAKYGGS 1081
Query: 671 SQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCA 730
V+ T D QGRE ++ IFSCVRAS + IGFL+D RRMNVG+TRAKSS+ V+G +
Sbjct: 1082 IFTAVEFNTTDAFQGRECEIIIFSCVRASS-RGIGFLSDIRRMNVGLTRAKSSLWVLGNS 1140
Query: 731 STLREDKHWNNLVKSAEKQD 750
+L + + W L+ A+ +D
Sbjct: 1141 QSLVQGEFWRALIHDAQGRD 1160
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 127/281 (45%), Gaps = 35/281 (12%)
Query: 19 KIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKA 78
K +L WD+F ++ + G+ V +++ + +Y TFEPLL E
Sbjct: 441 KTLLSWDFF----------TESVLPPNCGQTDYTLVSNSFANALEYQKTFEPLLILEAWQ 490
Query: 79 QIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADEVE--SISPNDLLLLSKEEFKE 136
+++ +E+++++ D F S + +V+ + DL+LLS+
Sbjct: 491 GFQTAREDATFKEFEIKVANRLS-VDSFVEVSTIMDPLQVKDLGLGEADLVLLSR----- 544
Query: 137 GSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSAVEK 196
S P T + A HC A + I K A++ +N + + +S
Sbjct: 545 -SNKPATESNA--PHCLARI---------SSIKKKKGAMEISYRINPNGSM-ASGIGPGG 591
Query: 197 RLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIKEN 256
LF +KI SL+ + REY AL ++ + I+ A + S + +L Y +
Sbjct: 592 GLFGVKITSLTPLEREYGALMALQYYDLSEEIIKA-KPSPILNYGPESLKTILGTY---D 647
Query: 257 HNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAIL 297
N +Q +A+ + AF LIQGPPG+GKT+TI+ ++ A+L
Sbjct: 648 LNPAQSKAVKSAVDNDAFTLIQGPPGSGKTKTIVAIVGALL 688
Score = 39.7 bits (91), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVN--SVAIDHLVEQ 432
++LVCAPSN+A+DE+V+R GI+ + + ++R+G + N V +D LV
Sbjct: 717 KLLVCAPSNAAVDELVMR-FKEGIKTISGKIQPISVIRLGRSDAINTNVLDVTLDELVNA 775
Query: 433 KRDDSAADKQKHGATR 448
K + + ++K+G R
Sbjct: 776 KLNQTG--QKKNGEER 789
>gi|356522392|ref|XP_003529830.1| PREDICTED: probable helicase senataxin-like [Glycine max]
Length = 1388
Score = 259 bits (662), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 136/304 (44%), Positives = 183/304 (60%), Gaps = 2/304 (0%)
Query: 451 RDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQ 510
R S+ ++ NEA +V +T+S SG L S+L+HGFD+V+IDEAAQA E A L PL+ G +
Sbjct: 946 RASLEASFANEAEVVFTTVSSSGRKLFSRLSHGFDMVVIDEAAQASEVAILPPLSLGAAR 1005
Query: 511 VFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREF 570
LVGDP QLPATVIS A L Y SLF+R Q+AG P +L QYRMHP++R FPSR F
Sbjct: 1006 CVLVGDPQQLPATVISKAAGTLMYSRSLFERFQQAGCPTMLLSVQYRMHPQIRDFPSRYF 1065
Query: 571 YDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
Y L D V +++ P+ F+DI G+ES GS S+ NI E F L L+
Sbjct: 1066 YQGRLTDSESVAKLPDEPYYKDPLLRPYIFYDIRHGRESHRGGSVSYQNIHEAQFCLRLY 1125
Query: 631 HKLISMYPQLKSSS-QLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKD 689
+ L + II+PY+ Q+K Q F E E K + I TVD QG+E+D
Sbjct: 1126 EHVQKTVKSLGVGKITVGIITPYKLQLKCLQREFDEVLNSEEGKDLYINTVDAFQGQERD 1185
Query: 690 VAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQ 749
V I SCVRAS +GF+AD RRMNV +TRA+ ++ V+G A+ L + + W L+ A+ +
Sbjct: 1186 VIIMSCVRASS-HGVGFVADIRRMNVALTRARRALWVMGNANALLQSEDWAALINDAKSR 1244
Query: 750 DCLF 753
+C
Sbjct: 1245 NCYM 1248
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 114/255 (44%), Gaps = 46/255 (18%)
Query: 203 ICSLSTIAREYLALRSVG--SLPFKDLILSAS-EKSSGSQDQSWKIPGLLH----EYIKE 255
+ SL+T REY+AL + +L + IL S E + Q+ +P EY+
Sbjct: 609 LGSLATTQREYIALHAFRRLNLQMQTAILQPSPEHFPKYEQQTPAMPECFTQNFVEYLHR 668
Query: 256 NHNASQLEAIHEGLLRKA---------------FVLIQGPPGTGKTQTILGLLSAILHAT 300
N QL AI + A F L+QGPPGTGKT T+ G+L+ ++H
Sbjct: 669 TFNEPQLAAIQWAAMHTAAGTSSGTTKRQEPWPFTLVQGPPGTGKTHTVWGMLN-VIHLV 727
Query: 301 PARVHSKGGLREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNE 360
+ + L+ + E Y S DN D+ N
Sbjct: 728 QYQHYYTSLLKHV-------APESYKQVNEIS--------SDNAATGSIDEVLQNMDQNL 772
Query: 361 LK--PEVVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAH 418
L+ P++V + R+LVCAPSN+A DE++ R+L+ G D ++ Y P + R+G+ +
Sbjct: 773 LRTLPKLVP-----KPRMLVCAPSNAATDELLARVLDRGFIDGEMKVYRPDVARVGVDSQ 827
Query: 419 -HSVNSVAIDHLVEQ 432
+ +V+++ EQ
Sbjct: 828 TRAAQAVSVERRTEQ 842
>gi|315055809|ref|XP_003177279.1| helicase SEN1 [Arthroderma gypseum CBS 118893]
gi|311339125|gb|EFQ98327.1| helicase SEN1 [Arthroderma gypseum CBS 118893]
Length = 2179
Score = 259 bits (661), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 143/343 (41%), Positives = 201/343 (58%), Gaps = 15/343 (4%)
Query: 436 DSAADKQKHGATRK---DRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEA 492
D+A DK H A R R I+ I++ A ++CSTLS SG + L+ F+ V+IDEA
Sbjct: 1498 DNARDKN-HSAARNAELTRRRIQQEIIDGAHVICSTLSGSGHEMFQSLSIEFETVVIDEA 1556
Query: 493 AQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYP--VK 550
AQ++E + L+PL GC + LVGDP QLP TV+S A Y SLF R+Q A +P V
Sbjct: 1557 AQSIELSALIPLKYGCSKCVLVGDPKQLPPTVLSKEASRFQYEQSLFVRMQ-ANHPNDVH 1615
Query: 551 MLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQ 610
+L TQYRMHPE+ FPS+ FYD L+DG + + WH GP+ FFD+ +G S
Sbjct: 1616 LLDTQYRMHPEISKFPSQAFYDGKLQDGPGMAPLRKKPWHGSELLGPYRFFDV-QGMHSS 1674
Query: 611 PAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVE 670
A S +NI E+ + L+ +L++ Y + ++ II+PY+ Q+++ + RF +G
Sbjct: 1675 AAKGHSLVNIAELTVAMRLYERLLADYRNYDFAGKIGIITPYKGQLRELKSRFAAKYGSS 1734
Query: 671 SQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCA 730
V+ T D QGRE +V IFSCVRASD + IGFL+D RRMNVG+TRAKSS+ V+G +
Sbjct: 1735 IFTAVEFNTTDAFQGRECEVIIFSCVRASD-RGIGFLSDIRRMNVGLTRAKSSLWVLGNS 1793
Query: 731 STLREDKHWNNLVKSAEKQ------DCLFRVSKPYASFFSDEN 767
+L + W L+ A + D L + KP S + N
Sbjct: 1794 QSLVRGEFWRALIHDARDRQLYTEGDILKILQKPQISLDMEMN 1836
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 124/281 (44%), Gaps = 35/281 (12%)
Query: 19 KIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKA 78
K +L WD+F + + G+ V +T+ + +Y TFEPLL E
Sbjct: 1094 KTLLSWDFFA----------ASVLPPNCGRTDYTLVSNTFANALEYQKTFEPLLILEAWQ 1143
Query: 79 QIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADEVE--SISPNDLLLLSKEEFKE 136
+++ +E+++++ D F S E +V+ + DL+LLS+
Sbjct: 1144 GFQTAREDATFKEFEIKVANRLS-VDSFVEVSTIMEPQQVKDLGLGEADLVLLSR----- 1197
Query: 137 GSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSAVEK 196
S P + A HC + +G I K V+ +N + +S
Sbjct: 1198 -SNKPAIDSSA--PHCLGRI-------SG--IKKKKGIVEVSYRINPSGPM-ASGIGPGG 1244
Query: 197 RLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIKEN 256
LF +KI SL+ + REY AL ++ + I+ A + S + +L Y +
Sbjct: 1245 GLFGVKITSLTPLEREYGALMALQYYDLSEEIIKA-KPSPILNYGPESLKSILATY---D 1300
Query: 257 HNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAIL 297
N +Q +AI + AF LIQGPPG+GKT+TI+ ++ AIL
Sbjct: 1301 LNLAQAKAIKSAVDNDAFTLIQGPPGSGKTKTIVAIVGAIL 1341
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 37/61 (60%), Gaps = 3/61 (4%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVN--SVAIDHLVEQ 432
++LVCAPSN+A+DE+V+R G++ N ++ ++R+G + N V +D LV
Sbjct: 1370 KLLVCAPSNAAVDELVMR-FKEGVKTLNGKTQPISVIRLGRSDAINANVLDVTLDELVNA 1428
Query: 433 K 433
K
Sbjct: 1429 K 1429
>gi|255545656|ref|XP_002513888.1| splicing endonuclease positive effector sen1, putative [Ricinus
communis]
gi|223546974|gb|EEF48471.1| splicing endonuclease positive effector sen1, putative [Ricinus
communis]
Length = 1352
Score = 258 bits (660), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 138/314 (43%), Positives = 186/314 (59%), Gaps = 2/314 (0%)
Query: 451 RDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQ 510
R S+ ++ NEA IV +T+S SG L S+L HGFD+V+IDEAAQA E A L PLA G +
Sbjct: 941 RASLEASFANEAEIVFTTVSSSGRKLFSRLTHGFDMVVIDEAAQASEVAVLPPLALGAPR 1000
Query: 511 VFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREF 570
LVGDP QLPATVIS A L Y SLF+R Q+AG P +L QYRMHP++R FPSR F
Sbjct: 1001 CVLVGDPQQLPATVISKAAGTLMYSRSLFERFQQAGCPTMLLSVQYRMHPQIRDFPSRHF 1060
Query: 571 YDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
Y L D V + +++ P+ F+D+ G+ES GS S+ N+ E F L+
Sbjct: 1061 YQSRLTDSESVVNLPDEMYYKDPLLRPYLFYDVTYGRESHRGGSVSFQNVHEAQFCFQLY 1120
Query: 631 HKLISMYPQLK-SSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKD 689
L L + II+PY+ Q+K Q F E K + I TVD QG+E+D
Sbjct: 1121 EHLQKTLKSLGLGRISVGIITPYKLQLKCLQHEFAAILKSEEGKDIYINTVDAFQGQERD 1180
Query: 690 VAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQ 749
V I SCVRAS+ S+GF+AD RRMNV +TRA+ ++ V+G A++L + W L+ A+ +
Sbjct: 1181 VIIMSCVRASN-HSVGFVADIRRMNVALTRARRALWVMGNANSLVKSDDWAALIDDAKAR 1239
Query: 750 DCLFRVSKPYASFF 763
+C + FF
Sbjct: 1240 NCYMDMESLPKEFF 1253
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 119/259 (45%), Gaps = 46/259 (17%)
Query: 199 FSLKICSLSTIAREYLALRSVGSL--PFKDLILSASEKSSGSQDQSWKIPGL-------L 249
F + SL+T REY+AL + L + IL S + +Q +IP +
Sbjct: 600 FLTVLGSLATTQREYVALHAFCRLNSQMQTAILKPSPEHFPKYEQ--QIPAMPECFTQNF 657
Query: 250 HEYIKENHNASQLEAIHEGLLRKA---------------FVLIQGPPGTGKTQTILGLLS 294
+++ N QL AI + A F L+QGPPGTGKT T+ G+L+
Sbjct: 658 ADHLHRTFNGPQLAAIQWAAMHTAAGTSSGMTKRQDPWPFTLVQGPPGTGKTHTVWGMLN 717
Query: 295 AILHATPARVHSKGGLREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFF 354
++H + + L+++ + Y ++P + D ++ + D F
Sbjct: 718 -VIHLVQYQHYYTSLLKKL-------APQSYKQANESNPDNIAMGSIDEVL-HNMDQNLF 768
Query: 355 PTTGNELKPEVVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIG 414
+ ++L P + R+LVCAPSN+A DE++ R+L+ G D ++ Y P + R+G
Sbjct: 769 RSL-SKLCP---------KPRMLVCAPSNAATDELLARVLDRGFIDGEMKVYRPDVARVG 818
Query: 415 LKAH-HSVNSVAIDHLVEQ 432
+ + + +V+++ EQ
Sbjct: 819 VDSQSRAAQAVSVERRTEQ 837
>gi|67903368|ref|XP_681940.1| hypothetical protein AN8671.2 [Aspergillus nidulans FGSC A4]
gi|40740903|gb|EAA60093.1| hypothetical protein AN8671.2 [Aspergillus nidulans FGSC A4]
Length = 2234
Score = 258 bits (660), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 142/352 (40%), Positives = 209/352 (59%), Gaps = 17/352 (4%)
Query: 436 DSAADKQKHGATRK---DRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEA 492
D+A DK H A R +R I+ I++ A ++C+TLS SG + L+ F+ V+IDEA
Sbjct: 1490 DNARDKN-HSAARDADLNRRRIQQEIIDGAHVICATLSGSGHEMFQNLSIEFETVVIDEA 1548
Query: 493 AQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYP--VK 550
AQ++E + L+PL GC + LVGDP QLP TV+S VA Y SLF R+Q + +P V
Sbjct: 1549 AQSIELSALIPLKYGCSKCILVGDPKQLPPTVLSKVASKYQYEQSLFVRMQ-SNHPNDVH 1607
Query: 551 MLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQ 610
+L QYRMHP + FP FYD L+DG D+ TR WH+ P+ FFD+ +S
Sbjct: 1608 LLDIQYRMHPAISMFPRTAFYDGRLQDGPDMARLRTRPWHQSELLSPYRFFDVQGLHQSA 1667
Query: 611 PAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVE 670
P G S +N E+ + L+ +L+ + + S ++ II+PY+ Q+++ + +F +G
Sbjct: 1668 PKGH-SLVNFAELKVAMQLYERLLKDFKEYDFSGKVGIITPYKGQLRELKTQFANKYGNA 1726
Query: 671 SQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCA 730
++D T D QGRE +V IFSCVRAS+ K IGFL+D RRMNVG+TRAKSS+ V+G +
Sbjct: 1727 IFNMIDFNTTDAFQGREAEVIIFSCVRASN-KGIGFLSDIRRMNVGLTRAKSSLWVLGNS 1785
Query: 731 STLREDKHWNNLVKSAEKQ------DCLFRVSKPYASFFSDENLESMRKNAT 776
+L + + W +LV A ++ D L + KP F +N+E +A+
Sbjct: 1786 QSLVQGEFWRSLVTDARQRNVYTDGDILKLLEKP--QFTGYKNVEMAEADAS 1835
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 103/430 (23%), Positives = 174/430 (40%), Gaps = 91/430 (21%)
Query: 19 KIILGWDYFRL--VKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEV 76
+ +L WD+F + S R D + V ++++D +Y TFEPLL E
Sbjct: 1085 RTLLSWDFFATGDLPPSSGRTDYSL------------VSNSFRDPIEYQKTFEPLLILEA 1132
Query: 77 KAQIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADEVE--SISPNDLLLLSKEEF 134
K+E + +++++ D F + +V+ + DL+LLSK
Sbjct: 1133 WQGFQASKEEGGFKTFEIKVATRLS-VDAFVEVNTNMIGMDVKDTGVFEADLVLLSKAS- 1190
Query: 135 KEGSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSAV 194
+T P+ V HC A + I K V+ +N + +S+
Sbjct: 1191 -NPATNPS------VPHCLARVAN---------ISKKKGVVEVSYRVNPGNPFINSLGP- 1233
Query: 195 EKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSS-GSQDQSWKIPGLLHEYI 253
++ KI SL+ + RE+ AL ++ + I+ A D S K L+ Y
Sbjct: 1234 GATIYGAKITSLTPLEREFGALMALQYYDLCEEIVRARPSPILNYSDASLK--PLVDNY- 1290
Query: 254 KENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLREI 313
N N +Q +AI + AF LIQGPPG+GKT+TI+ L+ A+L
Sbjct: 1291 --NVNPAQAKAIKSAMDNDAFTLIQGPPGSGKTKTIVALVGALL---------------- 1332
Query: 314 KRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNSSRRYR 373
N + G PT +P ++ +
Sbjct: 1333 ----------------------------TNALKDQGIVITRPTAAINARPGARTTTSK-- 1362
Query: 374 VRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVN--SVAIDHLVE 431
++LVCAPSN+A+DE+V+R G++ + R ++R+G + N V +D LV
Sbjct: 1363 -KLLVCAPSNAAVDELVMR-FKEGVKTIHGRHEKLSVIRLGRSDAINTNVLDVTLDELVN 1420
Query: 432 QKRDDSAADK 441
+ ++ +K
Sbjct: 1421 ARLKQTSGEK 1430
>gi|327306928|ref|XP_003238155.1| tRNA-splicing endonuclease [Trichophyton rubrum CBS 118892]
gi|326458411|gb|EGD83864.1| tRNA-splicing endonuclease [Trichophyton rubrum CBS 118892]
Length = 2196
Score = 258 bits (659), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 142/337 (42%), Positives = 201/337 (59%), Gaps = 13/337 (3%)
Query: 436 DSAADKQKHGATRKD--RDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAA 493
D+A DK + A + R I+ I++ A ++CSTLS SG + L+ F+ VIIDEAA
Sbjct: 1515 DNARDKNQAAARNAELTRRRIQQEIIDGAHVICSTLSGSGHEMFQSLSIEFETVIIDEAA 1574
Query: 494 QAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYP--VKM 551
Q++E + L+PL GC + LVGDP QLP TV+S A Y SLF R+Q A +P V +
Sbjct: 1575 QSIELSALIPLKYGCSKCVLVGDPKQLPPTVLSKEASRFQYEQSLFVRMQ-ANHPNDVHL 1633
Query: 552 LKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQP 611
L TQYRMHPE+ FPS+ FYD L+DG + + WH GP+ FFD+ +G S
Sbjct: 1634 LDTQYRMHPEISKFPSQAFYDGKLQDGPAMGPLRKKPWHGSELLGPYRFFDV-QGMHSSA 1692
Query: 612 AGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVES 671
S +NI E+ + L+ +L++ Y + + ++ II+PY+ Q+++ + RF +G
Sbjct: 1693 TKGHSLVNIAELTVAMRLYERLLADYRNYEFAGKIGIITPYKGQLRELKSRFAAKYGSSI 1752
Query: 672 QKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCAS 731
V+ T D QGRE +V IFSCVRASD + IGFL+D RRMNVG+TRAKSS+ V+G +
Sbjct: 1753 FTTVEFNTTDAFQGRECEVIIFSCVRASD-RGIGFLSDIRRMNVGLTRAKSSLWVLGNSQ 1811
Query: 732 TLREDKHWNNLVKSA-EKQ-----DCLFRVSKPYASF 762
+L + W L+ A E+Q D L + KP S
Sbjct: 1812 SLVRGEFWRALIHDARERQLYTEGDILRILQKPQISL 1848
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 123/281 (43%), Gaps = 35/281 (12%)
Query: 19 KIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKA 78
K +L WD+F + G+ V + + + +Y TFEPLL E
Sbjct: 1111 KTLLSWDFFA----------TTVLPPNCGRTDYTLVSNVFANALEYQKTFEPLLILEAWQ 1160
Query: 79 QIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADEVE--SISPNDLLLLSKEEFKE 136
+++ +E+++++ D F S E +V+ + DL+LLS+
Sbjct: 1161 GFQTAREDATFKEFEIKVANRLS-VDSFVEVSTIMEPQQVKDLGLGEADLVLLSR----- 1214
Query: 137 GSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSAVEK 196
S P T + A HC + +G I K V+ +N S +S
Sbjct: 1215 -SNKPATDSSA--PHCLGRI-------SG--IKKKKGTVEVSYRIN-PSGPMASGIGPGG 1261
Query: 197 RLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIKEN 256
LF +KI SL+ + REY AL ++ + I+ A + S + +L Y +
Sbjct: 1262 GLFGVKITSLTPLEREYGALMALQYYDLSEEIIRA-KPSPILNYGPESLKTILATY---D 1317
Query: 257 HNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAIL 297
N +Q +AI + AF LIQGPPG+GKT+TI+ ++ A+L
Sbjct: 1318 LNPAQAKAIKSAVDNDAFTLIQGPPGSGKTKTIVAIVGALL 1358
Score = 42.4 bits (98), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 376 VLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVN--SVAIDHLVEQK 433
+LVCAPSN+A+DE+V+R G++ N ++ ++R+G + N V +D LV K
Sbjct: 1388 LLVCAPSNAAVDELVMR-FKEGVKTLNGKTQPISVIRLGRSDAINANVLDVTLDELVNAK 1446
Query: 434 RDDSAADK 441
+ S K
Sbjct: 1447 LNQSGQTK 1454
>gi|452846946|gb|EME48878.1| hypothetical protein DOTSEDRAFT_117955, partial [Dothistroma
septosporum NZE10]
Length = 1788
Score = 258 bits (659), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 130/318 (40%), Positives = 195/318 (61%), Gaps = 8/318 (2%)
Query: 434 RDDSAADKQKHGATRK--DRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDE 491
R DS D+Q++ + ++ ++ +L EA +VC+TLS SG + L+ F+ VIIDE
Sbjct: 1473 RIDSLKDQQRNAGREEELNKRRVQQTVLEEAHVVCATLSGSGHDIFQTLSVEFESVIIDE 1532
Query: 492 AAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYP--V 549
AAQ VE +L+PL GC + +VGDP QLP TV S A+ Y SLF R+Q +P V
Sbjct: 1533 AAQCVEMESLIPLKYGCVKCIMVGDPNQLPPTVFSKEAQKFQYEQSLFVRMQN-NFPNHV 1591
Query: 550 KMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKES 609
+L TQYRMHP++ FPS FYD L DG ++ + + WH P+ FFD+
Sbjct: 1592 HLLDTQYRMHPDISFFPSETFYDRKLMDGPNMAELRKQPWHASALLAPYRFFDV---AGQ 1648
Query: 610 QPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGV 669
Q + S+IN+ E+D +LL+ ++ + + +L ++++ II+PY+ Q+++ + RF +G
Sbjct: 1649 QQTSAKSFINLAEIDIAMLLYDRVRADFSELDWNNKIGIITPYKSQLRELKRRFANKYGE 1708
Query: 670 ESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGC 729
Q ++ T D QGRE ++ IFSCVRAS IGFL D RRMNVG+TRAKSS+ V+G
Sbjct: 1709 GIQDFIEFNTTDAFQGRECEIIIFSCVRASPAGGIGFLQDIRRMNVGLTRAKSSLWVLGN 1768
Query: 730 ASTLREDKHWNNLVKSAE 747
+ +L ++W LV +A+
Sbjct: 1769 SESLSRGRYWKLLVDNAK 1786
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 104/431 (24%), Positives = 189/431 (43%), Gaps = 86/431 (19%)
Query: 19 KIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKA 78
+ +L WD+F ++ S D R V+++++D Y ATFEPLL E
Sbjct: 1065 QTMLAWDFFH-----EDDYPPGSSSQD-----FRAVENSFRDPVSYQATFEPLLTLEAWQ 1114
Query: 79 QIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADEVE-SISPNDLLLLSKEEFK-E 136
I++ ++E + + ++L++ S+ ++ E + +D++LLS + E
Sbjct: 1115 GIVRAREENQSKPYELKVQNRSNVDQFIEFSSIIGHPEQKEVDLRASDIILLSTSKKPVE 1174
Query: 137 GSTFPTTYAFALVEHCQANLLRL-RMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSAVE 195
S P HC A + ++ R EV++ A L + ++I
Sbjct: 1175 DSALP---------HCLARVQKVTRQKAHFEVVYQMMPASALAPKLTMQAII-------- 1217
Query: 196 KRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIKE 255
+ +K+ ++ + R+Y AL+++ + I+ A + SS + +I + Y
Sbjct: 1218 ---YGVKVTTIIPLERQYGALKALQYYDLCNQIVRA-KPSSRYEFSDKQISSMQDVY--- 1270
Query: 256 NHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLREIKR 315
N N +Q EA++ L + F LIQGPPG+GKT+TI ++ +L T + SKG R
Sbjct: 1271 NLNRAQSEAVNAALENEGFSLIQGPPGSGKTKTITAIVGGLLTQTLSN-DSKGVTR---- 1325
Query: 316 GPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNSSRRYRVR 375
+P N G A P+ +
Sbjct: 1326 -ISMPKGSAVNGGGDA--------------PVK--------------------------K 1344
Query: 376 VLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHS--VNSVAIDHLVEQK 433
+LVCAPSN+A+DE+ +RL+ GI+ ++ + +VRIG + S V V ++ LV+++
Sbjct: 1345 LLVCAPSNAAVDELCVRLM-AGIKTKHGVHHNINVVRIGRSDNISAQVAEVTLESLVQKR 1403
Query: 434 RDDSAADKQKH 444
+ ++H
Sbjct: 1404 MGGTEKGPKQH 1414
>gi|444322031|ref|XP_004181671.1| hypothetical protein TBLA_0G02100 [Tetrapisispora blattae CBS 6284]
gi|387514716|emb|CCH62152.1| hypothetical protein TBLA_0G02100 [Tetrapisispora blattae CBS 6284]
Length = 2235
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 128/305 (41%), Positives = 189/305 (61%), Gaps = 3/305 (0%)
Query: 450 DRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCK 509
DR + +++IL + I+CSTLS S +L+ L FD VIIDEA Q E ++++PL G K
Sbjct: 1510 DRRNTQASILAGSDIICSTLSGSAHDVLASLGVQFDTVIIDEACQCTELSSIIPLRYGGK 1569
Query: 510 QVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSRE 569
+ +VGDP QLP TV+S A Y SLF R+++ P +L QYRMHP + FPS+E
Sbjct: 1570 RCIMVGDPNQLPPTVLSGAASDFNYNQSLFVRMEKNTKPY-LLNVQYRMHPLISRFPSKE 1628
Query: 570 FYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLL 629
FY L+DG D+E T R WH GP+ FFDI GK+ Q + S++N +EV + L
Sbjct: 1629 FYKRELKDGPDMEKITARPWHSLEALGPYKFFDIVSGKQEQNIKTMSYVNPEEVRVAIEL 1688
Query: 630 FHKLISMY-PQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREK 688
L+ + ++ + ++ +ISPYR Q+ + + F FG VD T+DG QG+EK
Sbjct: 1689 IDYLLRHFEKKVDFTGKIGVISPYREQMMKMKRDFNSYFGGVISTYVDFNTIDGFQGQEK 1748
Query: 689 DVAIFSCVRA-SDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAE 747
++ + SCVRA + K +GFL D+RRMNV +TRAKSS+ ++G +L ++K W +L++ A
Sbjct: 1749 EIILLSCVRADASKTGVGFLKDFRRMNVALTRAKSSMWILGHHKSLYKNKLWKHLIEDAH 1808
Query: 748 KQDCL 752
K++ L
Sbjct: 1809 KRNAL 1813
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 101/403 (25%), Positives = 174/403 (43%), Gaps = 94/403 (23%)
Query: 50 GLREVKDTYKDVDDYLATFEPLLFEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGFHL- 108
L+ VKD + V DY T PLL E + +D+E+ + + + + +D + +
Sbjct: 1097 SLKPVKDKFSSVVDYQNTMRPLLLLECWQGLCNTRDKEDFRPFSIIVGNRTAVSDFYEVY 1156
Query: 109 PSVTYEADEVESISPNDLLLLSKEEFKEGSTFPTTYAFALV---------EHCQANLLRL 159
S+ + + SIS +DL++L+ FP Y + + C A + +
Sbjct: 1157 ASIPKQMIQESSISESDLIVLAH--------FPNLYPNQKLTSDDFKHTPDTCLAKIKSM 1208
Query: 160 RMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSAVEKRLFSLKICSLSTIAREYLALRSV 219
+ GE + I ++ R SL T + ++K+ ++T+ REY L +
Sbjct: 1209 KN-AKGERVDITLRVHRNHRFSKFLSLRT--------EIHAMKVMQMTTVEREYTTLEGL 1259
Query: 220 GSLPFKDLILSAS-----EKSSGSQDQSWKIPGLLHEYIKENH--NASQLEAIHEGLLRK 272
+ IL A+ E S G E +K N+ N SQ EAI +
Sbjct: 1260 EYYDLVNQILEANPTPHVEASHGEI-----------ERVKANYKLNTSQAEAIVNTVSNP 1308
Query: 273 AFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLREIKRGPELPMHEKYNHWGRAS 332
F LIQGPPGTGKT+TILG++ L SK + R PE + +
Sbjct: 1309 GFSLIQGPPGTGKTKTILGIIGYFLST------SKMVPSNVIRAPEGVTNSE-------- 1354
Query: 333 PWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNSSRRYRVRVLVCAPSNSALDEIVLR 392
+ +D ++ + ++L+CAPSN+A+DE+VLR
Sbjct: 1355 ------SSKDKLLK--------------------------KQKILICAPSNAAVDEVVLR 1382
Query: 393 LLNTGIRDENIRSYTPKIVRIGLK--AHHSVNSVAIDHLVEQK 433
L +GI D++ + + P +VR+G + ++ V ++ LV+++
Sbjct: 1383 -LKSGIYDKDGKHFIPNLVRVGRSDAVNAAIKDVTLEELVDKR 1424
>gi|357513937|ref|XP_003627257.1| Helicase sen1 [Medicago truncatula]
gi|355521279|gb|AET01733.1| Helicase sen1 [Medicago truncatula]
Length = 1516
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 136/304 (44%), Positives = 182/304 (59%), Gaps = 2/304 (0%)
Query: 451 RDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQ 510
R S+ ++ NEA IV +T+S SG L S+L+HGFD+V+IDEAAQA E L PL+ G +
Sbjct: 1031 RASLEASFANEAEIVFTTVSSSGRKLFSRLSHGFDMVVIDEAAQASEVGVLPPLSLGAAR 1090
Query: 511 VFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREF 570
LVGDP QLPATVIS A L Y SLF+R Q+AG P +L QYRMHP++R FPSR F
Sbjct: 1091 CVLVGDPQQLPATVISKAAGTLMYSRSLFERFQQAGCPTMLLSVQYRMHPQIRDFPSRYF 1150
Query: 571 YDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
Y L D V +++ P+ F+DI G+ES GS S+ NI E F L L+
Sbjct: 1151 YQGRLSDSESVIKLPDEAYYKDPLLRPYIFYDIRHGRESHRGGSVSYQNIHEAQFCLRLY 1210
Query: 631 HKLISMYPQLK-SSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKD 689
+ L + II+PY+ Q+K Q F+E E K + I TVD QG+E+D
Sbjct: 1211 EHIQKTVKSLGLPKISVGIITPYKLQLKCLQREFEEVLNSEEGKDIYINTVDAFQGQERD 1270
Query: 690 VAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQ 749
V I SCVRAS +GF+AD RRMNV +TRA+ ++ V+G A+ L + + W L+ A +
Sbjct: 1271 VIIMSCVRAS-THGVGFVADIRRMNVALTRARRALWVMGNANALIQSEDWAALIADARSR 1329
Query: 750 DCLF 753
+C
Sbjct: 1330 NCYM 1333
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 117/255 (45%), Gaps = 46/255 (18%)
Query: 203 ICSLSTIAREYLALRSVGSL--PFKDLILSAS-EKSSGSQDQSWKIPGLLH----EYIKE 255
+ SL+T REY+AL + L + IL S E + Q+ +P EY++
Sbjct: 694 LGSLATTQREYVALHAFRRLNMQMQSAILQPSPEHFPKYEQQTPAMPECFTPNFTEYLRR 753
Query: 256 NHNASQLEAIHEGLLRKA---------------FVLIQGPPGTGKTQTILGLLSAILHAT 300
N QL AI + A F L+QGPPGTGKT T+ G+L+ ++H
Sbjct: 754 TFNEPQLAAIQWAAMHTAAGTSSVATKRQEPWPFTLVQGPPGTGKTHTVWGMLN-VIHLV 812
Query: 301 PARVHSKGGLREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNE 360
+ + L+ + PE +++ N DN D+ N
Sbjct: 813 QYQHYYTSLLKHV--APE--SYKQANELNS-----------DNAPTGSIDEVLQNMDQNL 857
Query: 361 LK--PEVVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAH 418
L+ P++V + R+LVCAPSN+A DE++ R+L+ G D ++ Y P + R+G+ +
Sbjct: 858 LRTLPKLVP-----KPRMLVCAPSNAATDELLSRVLDRGFIDGEMKVYRPDVARVGVDSQ 912
Query: 419 -HSVNSVAIDHLVEQ 432
+ +V+++ EQ
Sbjct: 913 TRAAQAVSVERRTEQ 927
>gi|156089077|ref|XP_001611945.1| hypothetical protein [Babesia bovis T2Bo]
gi|154799199|gb|EDO08377.1| hypothetical protein BBOV_III008170 [Babesia bovis]
Length = 943
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 191/578 (33%), Positives = 278/578 (48%), Gaps = 70/578 (12%)
Query: 180 LLNIHSLITSSVSAVE----KRLFSLKICSLSTIAREYLALRSVGSLPFKDLILS----- 230
L N ++I S S E + + K+CS +T RE+ AL + S+P + +L
Sbjct: 219 LENTSNIIMGSASIEEPTTAESWYVSKLCSFATSMREFRALCQMKSMPLVNKMLGKYSGP 278
Query: 231 ASEKSSGSQDQSW----KIPGLLHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKT 286
S G + IP L ++ +N +QL +I L LIQGPPGTGKT
Sbjct: 279 VMSDSIGDDKTCYLEGVSIPEKLKRSLEAAYNDAQLRSIRNSLTSNGITLIQGPPGTGKT 338
Query: 287 QTILGLLSAIL---------HATPARVHSKGGLREIKRGPEL--------PMHEKYNHWG 329
TI+GL+SAIL +A ++ + R P P+ ++
Sbjct: 339 TTIIGLISAILEHDMLPPSCNAVSGPIYEHNAANAVSRCPWFTTDARQSEPLEVAFDELN 398
Query: 330 RASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNSSRRYRVRVLVCAPSNSALDEI 389
L A+ + D P+T ++ VV + R+ + R+L+CAPSN+A+DEI
Sbjct: 399 -----LTEAHMEAGVHRYDSYACMKPSTSTAVETIVVPTMRQSKRRILICAPSNAAIDEI 453
Query: 390 VLRLLNT---GIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQ---KRDDSAADKQK 443
V RL+ GI + Y P + RIG H + ++ V+ K +K K
Sbjct: 454 VRRLVRPVTGGIFNAEGERYNPNVTRIGPNFHDDLKQYSLKSKVDALGYKLYGRIYNKTK 513
Query: 444 HGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVP 503
+ A R + LN++ I+CSTLS GS L + FD +IIDEA QAVE +TL+
Sbjct: 514 YHA----RHRLTRETLNDSDIICSTLSACGSPELFVHRNMFDTLIIDEATQAVELSTLIA 569
Query: 504 LATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVR 563
L+ GC++V LVGDP QL ATV S VA L Y SLF+RLQ GYPV +L QYRM P +
Sbjct: 570 LSIGCRRVILVGDPCQLSATVCSNVAVSLKYDRSLFQRLQMCGYPVNLLDIQYRMDPLIS 629
Query: 564 SFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEV 623
FPS FY L+D V + DW E+ P F+ I Q S++N E
Sbjct: 630 RFPSMYFYRNQLKDAPSVYERQKSDWREFPLLRPAVFYAI---DSLQMKNETSYMNEMEA 686
Query: 624 DFVLLLFHKLISMY---PQLKSSS---QLAIISPYRHQVKQFQERF-------------K 664
+ V L ++ + P + SS ++A+I+ Y QV +E K
Sbjct: 687 ELVCQLLELILDVLAAEPGFELSSLEQRVAVITTYSAQVALLKETIARRHPQLVVPSVDK 746
Query: 665 ETF--GVESQKVV-DITTVDGCQGREKDVAIFSCVRAS 699
++ G+ K++ D+++VDG QG EK++ IFS VR S
Sbjct: 747 DSILPGISYPKLLFDVSSVDGFQGMEKEIVIFSAVRTS 784
>gi|328862576|gb|EGG11677.1| hypothetical protein MELLADRAFT_33290 [Melampsora larici-populina
98AG31]
Length = 349
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 139/325 (42%), Positives = 196/325 (60%), Gaps = 10/325 (3%)
Query: 430 VEQKRDDSAADKQK-HGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVI 488
+++ RD AA K+ ATRK +R IL +A ++CSTLS SG +S+L F+ V+
Sbjct: 8 LDEARDQQAASKRYLDAATRK----LRMQILQDADVICSTLSGSGHDYMSQLPFDFETVV 63
Query: 489 IDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQR-AGY 547
IDEA Q EPA+L+PL Q LVGDP+QLP TV+S A GY SLF R+QR A
Sbjct: 64 IDEACQCTEPASLIPLRYNATQCILVGDPLQLPPTVLSQAASKAGYDQSLFVRMQRFAPT 123
Query: 548 PVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWH-EYRCFGPFSFFDIHEG 606
V +L QYRMHP + +FPS+ FYD L DG D+ TT+ WH E F P++F+
Sbjct: 124 AVHLLSIQYRMHPAISAFPSKAFYDSRLMDGPDMASRTTQRWHTEDTFFPPYTFYHPIGA 183
Query: 607 KESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKET 666
+E + S+IN E + ++ +L +P + + ++ II+ Y QV + + +F+++
Sbjct: 184 REER-GRHHSFINRTEAGMTVAIYSRLTRTFPDIDFAYRVGIITAYAGQVGEIRRQFRQS 242
Query: 667 FGVESQKVVDITTVDGCQGREKDVAIFSCVRAS--DKKSIGFLADYRRMNVGITRAKSSI 724
F + +DI TVDG QG+EKD+ I SCVR D IGFL D RRMNV +TRAKSS+
Sbjct: 243 FPADVVSTLDINTVDGFQGQEKDIIILSCVRGGKDDDNGIGFLKDTRRMNVALTRAKSSL 302
Query: 725 LVVGCASTLREDKHWNNLVKSAEKQ 749
V+G S L +DK+W L+ A ++
Sbjct: 303 FVIGNQSALVQDKNWKALIDDARER 327
>gi|325189081|emb|CCA23608.1| ATPdependent helicase putative [Albugo laibachii Nc14]
gi|325189673|emb|CCA24157.1| ATPdependent helicase putative [Albugo laibachii Nc14]
Length = 2194
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 205/609 (33%), Positives = 290/609 (47%), Gaps = 114/609 (18%)
Query: 248 LLHEYIKENHNASQLEAIHEGL--LRKAFVLIQGPPGTGKTQTILGLLSAILHATPAR-- 303
LL I++ +N SQL++I L + L+QGPPGTGKT+TI+GLLS L P
Sbjct: 1431 LLWMVIRKQYNTSQLQSIANVLNNYKSGISLLQGPPGTGKTRTIMGLLSCFLSLKPELEK 1490
Query: 304 ----VHSKGGLREIKRGPELPMHEK--YNHWGRAS--------PWLVGANPRDNIMPIDG 349
+ GG ++ P + K NH A + R N+ G
Sbjct: 1491 ENRPAYPAGG---AEKAPVFAVSGKSIANHASIAGVLKRNDSHTTRLSIQTRKNLASARG 1547
Query: 350 D------DGFFPTTGNELKPEVVNSSRRYRVRV------LVCAPSNSALDEIVLRLLNTG 397
+ + T G K RR RV L+CAPSN A+DE+VLR++ G
Sbjct: 1548 NLDRKLKNPSSITPGGSFKSTTPVIHRRSSKRVSGGCNLLLCAPSNGAVDELVLRIVTDG 1607
Query: 398 IRD---ENIRSYTPK---------IVRIGLK---AHHSVNSVAIDHLVEQ--KRDDSAAD 440
+ D + P IVR+G A +V +V + H++E+ + A
Sbjct: 1608 LLDTEGQTTHLNRPSMDTDASKWTIVRLGSAGEDAPEAVKAVCLPHILEKEMRMHPKAMQ 1667
Query: 441 KQKH--------------------------------------GATRKDRDSIRS------ 456
Q++ G R+ R+ +R+
Sbjct: 1668 LQRYVEEQAKLREAIRAFHANKTETISRKELSRLHTKSTECFGRIRRMREELRNLESTLT 1727
Query: 457 -AILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVG 515
AILN+A I+ TLS +GS + S L GFD ++IDEAAQAVE + L+P+ +V LVG
Sbjct: 1728 LAILNKANIIACTLSKAGSGMFSSLPRGFDALVIDEAAQAVELSALIPIRERVARVILVG 1787
Query: 516 DPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEAL 575
DP QLPATV S +A Y SLF+RL G ML+ QYRMHP +R FPS FYD L
Sbjct: 1788 DPKQLPATVKSSLAAQARYDRSLFERLVECGLTPSMLRVQYRMHPFMREFPSDRFYDGQL 1847
Query: 576 EDGSDV-EDYTTRDW--HEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHK 632
DGS V + W +E+ F PF + H S+ + +GS N DE F + L
Sbjct: 1848 TDGSAVLQRMRNVRWNLYEHLYFQPFLLY--HVETSSEESVNGSKCNRDEAKFCVDLCVS 1905
Query: 633 LI-----SMYPQLKSSSQLAIISPYRHQVKQFQERFKETF---------GVESQKVVDIT 678
++ + P+L S + +SPY+ QV + + + + ++ V++
Sbjct: 1906 MLDEAGRNGAPRLTSQWSIGFVSPYKEQVHALRRQVQRSVLSQWLATSPNAQAAVSVEVN 1965
Query: 679 TVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKH 738
TVDG QGREKD+ +FS VR+S + IGFL D RR+NV ITRA+ + VVG +TL+ D+
Sbjct: 1966 TVDGFQGREKDMIVFSSVRSSSRGGIGFLRDIRRLNVAITRARYCLFVVGNTNTLKRDRT 2025
Query: 739 WNNLVKSAE 747
W VKSAE
Sbjct: 2026 WAAFVKSAE 2034
>gi|426195915|gb|EKV45844.1| hypothetical protein AGABI2DRAFT_72010 [Agaricus bisporus var.
bisporus H97]
Length = 1864
Score = 255 bits (652), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 169/452 (37%), Positives = 244/452 (53%), Gaps = 76/452 (16%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLK--AHHSVNSVAIDHLVEQ 432
+VL+CAPSN+A+DEI R+ + G R R K+VRIG + + SV V++DHLV+
Sbjct: 1364 KVLLCAPSNAAIDEIARRIKD-GYRGPEKRGEAIKVVRIGTEQSMNSSVKDVSLDHLVDL 1422
Query: 433 KRD-----DSAAD-----KQKHG------------------------------------- 445
+ D DS+A+ K+ G
Sbjct: 1423 EIDPPNSSDSSAEIITIRKELEGIRVKKDQLHRKLEEDPNTAQLATIQSEIAQLNARRSS 1482
Query: 446 -ATRKDR------------DSIRSA----ILNEAVIVCSTLSFSGSALLSKLNHGFDVVI 488
A R DR D++R + IL EA ++CSTLS +G ++ +L+ FD++I
Sbjct: 1483 LAGRMDRLKDEQKSASRTLDALRRSTRQKILLEADVICSTLSGAGHEIIERLD--FDMII 1540
Query: 489 IDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGY- 547
+DE+AQA+E +TL+PL C++ LVGDP QLP TV+S A Y SLF R+QR+
Sbjct: 1541 VDESAQAIELSTLIPLKYSCQRCILVGDPQQLPPTVLSQEASKYRYNQSLFVRMQRSQPD 1600
Query: 548 PVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGK 607
V +L QYRMHPE+ PS FY L DG + + T + WH+ FG + FF++ +G
Sbjct: 1601 AVHLLSIQYRMHPEISQLPSSVFYQGRLNDGPSMAEKTAQPWHKNAHFGIYKFFNVSKGL 1660
Query: 608 ESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKS--SSQLAIISPYRHQVKQFQERFKE 665
E S N+ E + LF++L Y Q S ++ I+S YR Q+ + + +F++
Sbjct: 1661 EEMSRHSIK--NLAECHVAVALFNRLRREYGQDMSDIDYRVGIVSMYRAQIAELKRQFEQ 1718
Query: 666 TFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDK-KSIGFLADYRRMNVGITRAKSSI 724
FG E VD TVDG QG+EKD+ I SCVRA +++GFL+D RRMNV +TRAKSS+
Sbjct: 1719 RFGKEILSRVDFNTVDGFQGQEKDIIILSCVRAGPGLQTVGFLSDVRRMNVALTRAKSSL 1778
Query: 725 LVVGCASTL-REDKHWNNLVKSAEKQDCLFRV 755
++G A+TL R D +W +V A + L V
Sbjct: 1779 YILGNAATLERSDPNWRRIVGDARGRSRLVEV 1810
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/251 (31%), Positives = 113/251 (45%), Gaps = 34/251 (13%)
Query: 51 LREVKDTYKDVDDYLATFEPLLFEEVKAQIIQKKDE-EEVQEWKLRLVMECGEADGFHLP 109
L + D + D++ Y FEPLL E AQI+Q KDE +E E K + AD +
Sbjct: 1119 LDPIPDIFMDLNHYRRVFEPLLMLECWAQIVQAKDEPQETLECK---ITSKQYADEWLEL 1175
Query: 110 SVTYEADEVESI---SPNDLLLLSKEEFKEGSTFPTTYAFALVEHCQANLLRLRMYLAGE 166
+ YE++ + D++LL +G T + + QA+L R YL
Sbjct: 1176 DIVYESNVRKDYYLSQETDVVLLRNPHTNDGVMAKTKSFTSNYQGVQASL---RCYL--- 1229
Query: 167 VIHINKDAVKSQRLLNIHSLITSSVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKD 226
KD + L S S K+ SLST+ REY AL+S+ F +
Sbjct: 1230 -----KDGARDPGLQISTSWRIS------------KVFSLSTLHREYAALQSLPYYDFVN 1272
Query: 227 LILSASEKSSGSQDQSWKIPGLLHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKT 286
IL ++ ++ +I + ++ N N Q AI + + F LIQGPPGTGKT
Sbjct: 1273 TILRPRLQNVELSNKQ-EIRKTMSDF---NINEPQAIAILKSMATNGFSLIQGPPGTGKT 1328
Query: 287 QTILGLLSAIL 297
TI GL+S L
Sbjct: 1329 STICGLVSLAL 1339
>gi|358055281|dbj|GAA98737.1| hypothetical protein E5Q_05425 [Mixia osmundae IAM 14324]
Length = 1976
Score = 255 bits (652), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 194/577 (33%), Positives = 285/577 (49%), Gaps = 63/577 (10%)
Query: 202 KICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIKENH--NA 259
K+ L T REY+AL+S LP+ +L A + G Q + I H N
Sbjct: 1249 KLTGLGTTIREYIALQS---LPYYEL---AEDVLRGRLKQKVAARSDTVDAIARKHQVNQ 1302
Query: 260 SQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLREIKRGPEL 319
Q AI L + F LIQGPPGTGKT+TI+GL+ A L AR GL K
Sbjct: 1303 PQAFAIAAALDAEGFTLIQGPPGTGKTKTIIGLVGAFL----ARRKPSDGLPSEKLLICA 1358
Query: 320 PMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNSSRRYRVRVLVC 379
P + + A+ G DN M + P++V + V
Sbjct: 1359 PSNAAIDEI--AARLKNGVRAEDNRMVV---------------PKIVRIGADSAIHAAV- 1400
Query: 380 APSNSALDEIVLRLLNTGIR-----DENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQKR 434
+ +DE + LLN G DE + + ++ + + + + +A L +Q+R
Sbjct: 1401 --KDLFIDEQIDALLNDGSHGDDKADEALSALRRQMEELKAERAQTQDMLARQGLDDQER 1458
Query: 435 DDSA------------------ADKQKHGATRKDRDS----IRSAILNEAVIVCSTLSFS 472
A A+K K G R+ +D+ +R+ +L + I+C+TLS S
Sbjct: 1459 GRLADVRRIQTREIYELGLRLDAEKDKTGDRRRAQDTRRFQMRNQVLCDCDIICATLSGS 1518
Query: 473 GSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHL 532
G +++L F+ VIIDEAAQ+VE ++L+PL G K+ +VGDP QLP TV+S VA+
Sbjct: 1519 GHDYMAQLPFQFETVIIDEAAQSVEISSLIPLRYGAKRCIMVGDPRQLPPTVLSTVAKDA 1578
Query: 533 GYGTSLFKRLQRA-GYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHE 591
Y +SLF R+Q+ V +L QYRMHP + ++PS FY L DG + T WH
Sbjct: 1579 NYASSLFVRMQKNHADGVHLLSIQYRMHPSISAWPSEVFYGGELRDGPGIAALTASSWHR 1638
Query: 592 YRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISP 651
P+SF +H Q + S N +E + +F + + S ++ +++
Sbjct: 1639 NPLLPPYSF--LHCSGAQQTGRNHSVFNPEEARVGVAIFKQFLKEVGDAISDIRVGVVTM 1696
Query: 652 YRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASD-KKSIGFLADY 710
Y+ QV + + FK FG + +D +TVDG QG+EKDV IFSCVR+ IGFL D
Sbjct: 1697 YKAQVFELRRLFKLAFGDDIVHRLDFSTVDGFQGQEKDVIIFSCVRSGQGSDPIGFLRDA 1756
Query: 711 RRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAE 747
RRMNV +TRAKSS+ ++G A TLR D W L+++A+
Sbjct: 1757 RRMNVALTRAKSSLFILGHAPTLRTDPTWRRLIENAQ 1793
>gi|449549000|gb|EMD39966.1| hypothetical protein CERSUDRAFT_150792 [Ceriporiopsis subvermispora
B]
Length = 1925
Score = 254 bits (650), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 152/398 (38%), Positives = 223/398 (56%), Gaps = 14/398 (3%)
Query: 424 VAIDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHG 483
V + H +++ +D +D + ATR+ R+ +L EA ++CSTLS S L +L+
Sbjct: 1469 VMLSHQIDKAKDKQKSDSRTLDATRR---KFRAEVLREADVICSTLSGSAYEYLEELD-- 1523
Query: 484 FDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQ 543
FD++IIDEAAQ++E ++L+PL C + +VGDP QLP TV S A GY SLF RL
Sbjct: 1524 FDLIIIDEAAQSIELSSLIPLKYRCSRCVMVGDPQQLPPTVKSQEACKFGYDQSLFVRLH 1583
Query: 544 RAGYPVK-MLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFD 602
+ V +L QYRMHP++ PS+ FY++ L+DG D+ T R WH + FG + FF+
Sbjct: 1584 KQNSNVAHLLSIQYRMHPDISRLPSQLFYNKRLQDGPDMAVKTRRPWHSHPKFGTYRFFN 1643
Query: 603 IHEGKESQPAGSG-SWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQE 661
+ EG+E G G S +N E + L+++L + ++ IIS YR Q+ + +
Sbjct: 1644 VGEGREEAGHGGGHSLVNRSEAQVAVALYNRLRQEFKAFDFDFKVGIISMYRGQIWELRR 1703
Query: 662 RFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDK-KSIGFLADYRRMNVGITRA 720
F++ FG + +D TVDG QG+EKDV I SCVRA S+GFL D RRMNV +TRA
Sbjct: 1704 VFEQRFGSDITGTIDFNTVDGFQGQEKDVIILSCVRAGPGVTSVGFLRDIRRMNVALTRA 1763
Query: 721 KSSILVVGCASTL-REDKHWNNLVKSAEKQDCLFRVSKPY--ASFFSDENLESMRKNATT 777
KSS+ V+G ASTL R D W ++V A + CL Y A + + L S K +
Sbjct: 1764 KSSLFVLGHASTLERSDDVWRDIVVDARTRSCLADTDTAYFTAPITAIKPLSSAIKKRSE 1823
Query: 778 DNVQGADGHVPHDDETMHYANTGDADQGQADDIDNADG 815
A+ +P D T H + + + + + +AD
Sbjct: 1824 PQ---AEPVIPSDLVTPHAYKSVVSAKASKEALASADA 1858
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 100/234 (42%), Gaps = 59/234 (25%)
Query: 202 KICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIKENHNASQ 261
K+ SL+T+ REY AL ++ F + I+ A + S ++ ++ + Y N N Q
Sbjct: 1229 KVLSLTTLHREYAALMALPHYDFLEAIMRA-QVSKPTELDGKEVRQAMEMY---NVNEPQ 1284
Query: 262 LEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLREIKRGPELPM 321
AI + F L+QGPPGTGKT TI GL VH+
Sbjct: 1285 ARAILNAFAVQGFSLVQGPPGTGKTSTICGL-----------VHA--------------- 1318
Query: 322 HEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNSSRRYRVRVLVCAP 381
+ PR P T + + + +VL+CAP
Sbjct: 1319 -------------FLSRRPR-------------PVTAVTIGRTAGPADKEPAKKVLLCAP 1352
Query: 382 SNSALDEIVLRLLNTGIRDENIRSYTPKIVRIG--LKAHHSVNSVAIDHLVEQK 433
SN+A+DEI R L G+ RS P++VR+G + SV ++++ L+EQK
Sbjct: 1353 SNAAIDEIAHR-LKEGVSGAGRRSICPQVVRVGNSNSMNVSVRDISLESLIEQK 1405
>gi|2340994|gb|AAB67523.1| Sen1p [Saccharomyces cerevisiae]
Length = 757
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 126/305 (41%), Positives = 189/305 (61%), Gaps = 3/305 (0%)
Query: 450 DRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCK 509
DR + ++ IL + I+CSTLS S +L+ + FD VIIDEA Q E ++++PL G K
Sbjct: 76 DRRNAQAHILAVSDIICSTLSGSAHDVLATMGIKFDTVIIDEACQCTELSSIIPLRYGGK 135
Query: 510 QVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSRE 569
+ +VGDP QLP TV+S A + Y SLF R+++ P +L QYRMHP + FPS E
Sbjct: 136 RCIMVGDPNQLPPTVLSGAASNFKYNQSLFVRMEKNSSPY-LLDVQYRMHPSISKFPSSE 194
Query: 570 FYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLL 629
FY L+DG ++ R WH+ P+ FFDI G++ Q A + S+ N++E+ + L
Sbjct: 195 FYQGRLKDGPGMDILNKRPWHQLEPLAPYKFFDIISGRQEQNAKTMSYTNMEEIRVAIEL 254
Query: 630 FHKLISMYP-QLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREK 688
L + ++ + ++ IISPYR Q+++ ++ F FG K +D T+DG QG+EK
Sbjct: 255 VDYLFRKFDNKIDFTGKIGIISPYREQMQKMRKEFARYFGGMINKSIDFNTIDGFQGQEK 314
Query: 689 DVAIFSCVRASD-KKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAE 747
++ + SCVRA D K S+GFL D+RRMNV +TRAK+SI V+G +L + K W +L++ A+
Sbjct: 315 EIILISCVRADDTKSSVGFLKDFRRMNVALTRAKTSIWVLGHQRSLAKSKLWRDLIEDAK 374
Query: 748 KQDCL 752
+ CL
Sbjct: 375 DRSCL 379
>gi|147779903|emb|CAN65841.1| hypothetical protein VITISV_009619 [Vitis vinifera]
Length = 1408
Score = 254 bits (649), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 135/304 (44%), Positives = 178/304 (58%), Gaps = 2/304 (0%)
Query: 451 RDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQ 510
R ++ ++ NEA IV +T+S SG L S+L HGFD+V+IDEAAQA E A L PL+ G +
Sbjct: 992 RANLEASFANEAEIVFTTVSSSGRKLFSRLTHGFDMVVIDEAAQASEVAVLPPLSLGAAR 1051
Query: 511 VFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREF 570
LVGDP QLPATVIS A L Y SLF+R Q+AG P +L QYRMHP +R FPSR F
Sbjct: 1052 CVLVGDPQQLPATVISKAAGTLLYSRSLFERFQQAGCPTMLLSVQYRMHPHIRDFPSRYF 1111
Query: 571 YDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
Y L D V + +++ P+ F+DI G+ES GS S+ NI E L L+
Sbjct: 1112 YQGRLTDSESVTNLPDEAYYKDPLLRPYVFYDITHGRESHRGGSVSYQNIHEAQICLRLY 1171
Query: 631 HKLISMYPQLKSSS-QLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKD 689
L L + II+PY+ Q+K Q F + E K + I TVD QG+E+D
Sbjct: 1172 EHLQKTLKSLGMGKISVGIITPYKLQLKCLQREFDDVLSSEEGKDLYINTVDAFQGQERD 1231
Query: 690 VAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQ 749
V I SCVRAS +GF+AD RRMNV +TRA+ ++ V+G A+ L + W L+ A +
Sbjct: 1232 VIIMSCVRAS-SHGVGFVADIRRMNVALTRARRALWVMGNANALMQSDDWAALISDARAR 1290
Query: 750 DCLF 753
C
Sbjct: 1291 SCYL 1294
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 116/253 (45%), Gaps = 42/253 (16%)
Query: 203 ICSLSTIAREYLALRSVG--SLPFKDLILSAS-EKSSGSQDQSWKIPGLLH----EYIKE 255
+ SL+T REY+AL + +L + IL S E ++Q +P EY+ +
Sbjct: 655 LGSLATTQREYIALHAFRRLNLQMQTAILHPSPEHFPKYEEQPPAMPECFTPNFVEYLHK 714
Query: 256 NHNASQLEAIHEGLLRKA---------------FVLIQGPPGTGKTQTILGLLSAILHAT 300
N QL AI + A F L+QGPPGTGKT T+ G+L+ ++H
Sbjct: 715 TFNGPQLAAIQWAAMHTAAGTSSGVTKRQDPWPFTLVQGPPGTGKTHTVWGMLN-VIHLV 773
Query: 301 PARVHSKGGLREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNE 360
+ + L+++ E Y ++ V D ++ D F T +
Sbjct: 774 QYQHYYTALLKKV-------APESYKQTNESTSDNVSMGSIDEVLQ-SMDQNLFRTLP-K 824
Query: 361 LKPEVVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAH-H 419
L P + R+LVCAPSN+A DE++ R+L+ G D ++ Y P + R+G+ +
Sbjct: 825 LCP---------KPRMLVCAPSNAATDELLARVLDRGFIDGEMKVYRPDVARVGVDSQTR 875
Query: 420 SVNSVAIDHLVEQ 432
+ +V+++ EQ
Sbjct: 876 AAQAVSVERRTEQ 888
>gi|225459354|ref|XP_002284214.1| PREDICTED: uncharacterized ATP-dependent helicase C29A10.10c-like
[Vitis vinifera]
Length = 1375
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 135/304 (44%), Positives = 178/304 (58%), Gaps = 2/304 (0%)
Query: 451 RDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQ 510
R ++ ++ NEA IV +T+S SG L S+L HGFD+V+IDEAAQA E A L PL+ G +
Sbjct: 959 RANLEASFANEAEIVFTTVSSSGRKLFSRLTHGFDMVVIDEAAQASEVAVLPPLSLGAAR 1018
Query: 511 VFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREF 570
LVGDP QLPATVIS A L Y SLF+R Q+AG P +L QYRMHP +R FPSR F
Sbjct: 1019 CVLVGDPQQLPATVISKAAGTLLYSRSLFERFQQAGCPTMLLSVQYRMHPHIRDFPSRYF 1078
Query: 571 YDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
Y L D V + +++ P+ F+DI G+ES GS S+ NI E L L+
Sbjct: 1079 YQGRLTDSESVTNLPDEAYYKDPLLRPYVFYDITHGRESHRGGSVSYQNIHEAQICLRLY 1138
Query: 631 HKLISMYPQLKSSS-QLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKD 689
L L + II+PY+ Q+K Q F + E K + I TVD QG+E+D
Sbjct: 1139 EHLQKTLKSLGMGKISVGIITPYKLQLKCLQREFDDVLSSEEGKDLYINTVDAFQGQERD 1198
Query: 690 VAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQ 749
V I SCVRAS +GF+AD RRMNV +TRA+ ++ V+G A+ L + W L+ A +
Sbjct: 1199 VIIMSCVRAS-SHGVGFVADIRRMNVALTRARRALWVMGNANALMQSDDWAALISDARAR 1257
Query: 750 DCLF 753
C
Sbjct: 1258 SCYL 1261
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 116/253 (45%), Gaps = 42/253 (16%)
Query: 203 ICSLSTIAREYLALRSVG--SLPFKDLILSAS-EKSSGSQDQSWKIPGLLH----EYIKE 255
+ SL+T REY+AL + +L + IL S E ++Q +P EY+ +
Sbjct: 622 LGSLATTQREYIALHAFRRLNLQMQTAILHPSPEHFPKYEEQPPAMPECFTPNFVEYLHK 681
Query: 256 NHNASQLEAIHEGLLRKA---------------FVLIQGPPGTGKTQTILGLLSAILHAT 300
N QL AI + A F L+QGPPGTGKT T+ G+L+ ++H
Sbjct: 682 TFNGPQLAAIQWAAMHTAAGTSSGVTKRQDPWPFTLVQGPPGTGKTHTVWGMLN-VIHLV 740
Query: 301 PARVHSKGGLREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNE 360
+ + L+++ E Y ++ V D ++ D F T +
Sbjct: 741 QYQHYYTALLKKV-------APESYKQTNESTSDNVSMGSIDEVLQ-SMDQNLFRTLP-K 791
Query: 361 LKPEVVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAH-H 419
L P + R+LVCAPSN+A DE++ R+L+ G D ++ Y P + R+G+ +
Sbjct: 792 LCP---------KPRMLVCAPSNAATDELLARVLDRGFIDGEMKVYRPDVARVGVDSQTR 842
Query: 420 SVNSVAIDHLVEQ 432
+ +V+++ EQ
Sbjct: 843 AAQAVSVERRTEQ 855
>gi|348684269|gb|EGZ24084.1| hypothetical protein PHYSODRAFT_359182 [Phytophthora sojae]
Length = 2487
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 164/453 (36%), Positives = 233/453 (51%), Gaps = 76/453 (16%)
Query: 376 VLVCAPSNSALDEIVLRLLNTGIRDENIR-------SYTPK--------IVRIGLK---A 417
+L+CAPSN A++E+VLR++ G+ D + + S P+ IVR+G A
Sbjct: 1613 ILLCAPSNGAVNELVLRIVTDGLMDSSGKVTKVRAPSVHPEAMSEEWISIVRLGNAGEDA 1672
Query: 418 HHSVNSVAIDHLVEQ--------------------------------------KRDDSAA 439
+VNSV + H++ + K+D A
Sbjct: 1673 SETVNSVCLPHIIRREMAIHPKAIQLHSLQDTQRQLRGSIRDFHNKEEDANGPKKDRKAL 1732
Query: 440 DKQKH------GATRKDRDSIRS-------AILNEAVIVCSTLSFSGSALLSKLNHGFDV 486
K G R+ RD + + IL++A I+ TLS +GS S+L HGFD
Sbjct: 1733 AKMHQQLTECSGKIRRLRDEVTAIRAKMTETILSKASIIACTLSKAGSGDFSELKHGFDA 1792
Query: 487 VIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAG 546
+IIDEAAQAVE +TLVP+ +V LVGDP QLPATV S VA Y SLF+R+ +G
Sbjct: 1793 LIIDEAAQAVELSTLVPIRERVARVVLVGDPKQLPATVKSVVAAKARYDRSLFERIAESG 1852
Query: 547 YPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR---DWHEYRCFGPFSFFDI 603
ML+ QYRMHP +R FPS+ FY L DG V + + + + F PF +D+
Sbjct: 1853 VAPSMLRVQYRMHPFLRDFPSKRFYGGMLTDGPSVMERVQKVCPGVYAHTSFQPFLLYDV 1912
Query: 604 HEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQL-KSSSQLAIISPYRHQVKQFQER 662
+E +GS N E F + L + + K+ + +SPY+ QV+ ++
Sbjct: 1913 ENSREED--MNGSKYNRVEAAFCISLCQNMFETIADVRKNKWSVGFVSPYKEQVRVLRQE 1970
Query: 663 FKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKS 722
++ G+ + +++ TVDG QGREKDV IFSCVRAS + IGFL D RR+NV ITRA+
Sbjct: 1971 ITKS-GIPTTVSIEVNTVDGFQGREKDVIIFSCVRASKRGGIGFLRDIRRLNVAITRARF 2029
Query: 723 SILVVGCASTLREDKHWNNLVKSAEKQDCLFRV 755
+ VVG +TL D+ W LVKSA + + R
Sbjct: 2030 CLYVVGNVNTLVRDETWAALVKSARDRKLIIRT 2062
Score = 46.6 bits (109), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 30/44 (68%), Gaps = 2/44 (4%)
Query: 249 LHEYIKENHNASQLEAIHEGL--LRKAFVLIQGPPGTGKTQTIL 290
L E IK +N+SQL++IH L L+QGPPGTGKT+TI+
Sbjct: 1425 LWEAIKPQYNSSQLQSIHSVLNNYSMGVSLLQGPPGTGKTKTIM 1468
>gi|301105483|ref|XP_002901825.1| ATP-dependent helicase, putative [Phytophthora infestans T30-4]
gi|262099163|gb|EEY57215.1| ATP-dependent helicase, putative [Phytophthora infestans T30-4]
Length = 2378
Score = 252 bits (644), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 163/452 (36%), Positives = 230/452 (50%), Gaps = 76/452 (16%)
Query: 376 VLVCAPSNSALDEIVLRLLNTGIRDEN---IRSYTPK------------IVRIGLK---A 417
+L+CAPSN A++E+VLR++ G+ D + I+ P IVR+G A
Sbjct: 1622 ILLCAPSNGAVNELVLRIVTDGLMDSSGNVIKVRAPSVHPEALSEEFISIVRLGNAGEDA 1681
Query: 418 HHSVNSVAIDHLVE--------------------------------------QKRDDSAA 439
VNSV + H++ QK+D A
Sbjct: 1682 SEVVNSVCLPHIIRREMAIHPKAMQLHSLQDTQRQLRSSIRAFHNKAEEDNGQKKDRKAL 1741
Query: 440 DKQKH------GATRKDRDSIRS-------AILNEAVIVCSTLSFSGSALLSKLNHGFDV 486
K G R+ RD + + IL++A I+ TLS +GS S+L HGFD
Sbjct: 1742 AKMHQQLTECSGKIRRLRDEVTTIRAKMTETILSKASIIACTLSKAGSGDFSELKHGFDA 1801
Query: 487 VIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAG 546
+IIDEAAQAVE +TLVP+ +V LVGDP QLPATV S VA Y SLF+R+ +G
Sbjct: 1802 LIIDEAAQAVELSTLVPIRERVARVVLVGDPKQLPATVKSVVAAKARYDRSLFERIAESG 1861
Query: 547 YPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR---DWHEYRCFGPFSFFDI 603
ML+ QYRMHP +R FPSR FY L DG V + + + F PF +D+
Sbjct: 1862 VAPSMLRVQYRMHPFLRDFPSRRFYGGMLTDGPSVMERVQKVCPGVYARTSFQPFLLYDV 1921
Query: 604 HEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSS-QLAIISPYRHQVKQFQER 662
+E +GS N E F + L + ++++ + +SPY+ QV+ ++
Sbjct: 1922 ENSREED--MNGSKYNRVEAAFCVSLCQNMFECCADVRNNKWSVGFVSPYKEQVRVLRQE 1979
Query: 663 FKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKS 722
+ G+ + +++ TVDG QGREKDV +FSCVR+S + IGFL D RR+NV ITRA+
Sbjct: 1980 ITRS-GIPASVSIEVNTVDGFQGREKDVIVFSCVRSSKRGGIGFLRDIRRLNVAITRARF 2038
Query: 723 SILVVGCASTLREDKHWNNLVKSAEKQDCLFR 754
+ VVG +TL D+ W LVKSA + + R
Sbjct: 2039 CLYVVGNVNTLVRDETWAALVKSARDRRLIIR 2070
Score = 46.2 bits (108), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 30/44 (68%), Gaps = 2/44 (4%)
Query: 249 LHEYIKENHNASQLEAIHEGL--LRKAFVLIQGPPGTGKTQTIL 290
L E IK +N+SQL++IH L L+QGPPGTGKT+TI+
Sbjct: 1439 LWEAIKPQYNSSQLQSIHSVLNNYSMGVSLLQGPPGTGKTKTIM 1482
>gi|184160102|gb|ACC68168.1| tRNA-splicing endonuclease positive effector-related protein
[Arabidopsis halleri subsp. halleri]
Length = 1054
Score = 252 bits (644), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 132/306 (43%), Positives = 183/306 (59%), Gaps = 2/306 (0%)
Query: 451 RDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQ 510
R S+ ++ NEA IV +T+S SG L S+L HGFD+V+IDEAAQA E L PLA G +
Sbjct: 730 RASLEASFANEAEIVFTTVSSSGRKLFSRLTHGFDMVVIDEAAQASEVGVLPPLALGAAR 789
Query: 511 VFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREF 570
LVGDP QLPATVIS A L Y SLF+R Q AG P +L QYRMHP++R FPSR F
Sbjct: 790 CVLVGDPQQLPATVISKAAGTLLYSRSLFERFQLAGCPTLLLTVQYRMHPQIRDFPSRYF 849
Query: 571 YDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
Y L+D + +++ P+ FF+I G+ES GS S+ N+DE F + ++
Sbjct: 850 YQGRLKDSESISSAPDEIYYKDPVLRPYLFFNISHGRESHRGGSVSYENVDEARFCVGVY 909
Query: 631 HKLISMYPQLKSSS-QLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKD 689
L L + + +I+PY+ Q+K + F G + K + I TVD QG+E+D
Sbjct: 910 MHLQKTLKLLGAGKVSVGVITPYKLQLKCLKHEFGNALGQDELKEIYINTVDAFQGQERD 969
Query: 690 VAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQ 749
V I SCVRAS +GF++D RRMNV +TRA+ ++ V+G AS L + + W L+ A +
Sbjct: 970 VIIMSCVRASG-HGVGFVSDIRRMNVALTRARRALWVMGNASALMKSEDWAALITDARGR 1028
Query: 750 DCLFRV 755
+C +
Sbjct: 1029 NCFMEM 1034
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 110/435 (25%), Positives = 195/435 (44%), Gaps = 92/435 (21%)
Query: 51 LREVKDTYKDVDDYLATFEPLLFEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGFHLPS 110
LR V + ++ +++Y+ FEPLLFEE +AQ+ W +E EA+
Sbjct: 243 LRSVPERFESMEEYVRVFEPLLFEECRAQLYST--------W-----VELAEAN------ 283
Query: 111 VTYEADEVESISPN-----DLLLLS----KEEFKEG--STFPTTYAFALVEHCQANLL-- 157
TY ++SI D++L+S K FKEG + T + +H A +
Sbjct: 284 -TYVKVRIKSIERRERGWYDVVLVSLNGCKWAFKEGDVAVLSTPLPESDEDHEDAGRVAG 342
Query: 158 RLRMYL---------AGEVIHINKDAVKSQRLLNIHSLITSSVSAVEKRLFSLKIC-SLS 207
++R ++ A ++ ++ + H L K ++ L + S++
Sbjct: 343 KVRRHIPVDTRDPLGATLYFYVGNSGGTGSKIDDNHIL----RKLKPKDIWHLTVLGSIA 398
Query: 208 TIAREYLALRSVGSL--PFKDLILSAS-EKSSGSQDQSWKIPGLLH----EYIKENHNAS 260
T REY+AL + L ++ IL+ S E+ ++Q+ P +++ + NA
Sbjct: 399 TSQREYVALHAFSRLNPQMQNAILNPSPEQFPSYEEQTPATPDCFTTSFVDHLHRSFNAP 458
Query: 261 QLEAIHEGLLRKA--------------FVLIQGPPGTGKTQTILGLLSAILHATPARVHS 306
QL AIH + A F L+QGPPGTGKT T+ G+L+ ++H + +
Sbjct: 459 QLAAIHWAAMHTAAGTSSGVKKQEPWPFTLVQGPPGTGKTHTVWGVLN-VIHLVQYQQYY 517
Query: 307 KGGLREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVV 366
L+++ E YN S + + D ++ + D F T P++
Sbjct: 518 TSLLKKLA-------PETYNQANECSSDNILSGSIDEVLQ-NMDQNLFRTL-----PKLC 564
Query: 367 NSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAH-HSVNSVA 425
+ R+LVCAPSN+A DE++ R+L+ G D ++ Y P + R+G+ + + +V+
Sbjct: 565 A-----KPRMLVCAPSNAATDELLSRVLDRGFIDGEMKIYRPDVARVGVDSQTRAAQAVS 619
Query: 426 I----DHLVEQKRDD 436
+ D L+ RD+
Sbjct: 620 VERRSDQLLAISRDE 634
>gi|15234617|ref|NP_194739.1| tRNA-splicing endonuclease positive effector-related protein
[Arabidopsis thaliana]
gi|4938486|emb|CAB43845.1| putative protein [Arabidopsis thaliana]
gi|7269910|emb|CAB81003.1| putative protein [Arabidopsis thaliana]
gi|332660321|gb|AEE85721.1| tRNA-splicing endonuclease positive effector-related protein
[Arabidopsis thaliana]
Length = 1311
Score = 252 bits (644), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 135/306 (44%), Positives = 182/306 (59%), Gaps = 2/306 (0%)
Query: 451 RDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQ 510
R S+ ++ NEA IV +T+S SG L S+L HGFD+V+IDEAAQA E L PLA G +
Sbjct: 905 RASLEASFANEAEIVFTTVSSSGRKLFSRLTHGFDMVVIDEAAQASEVGVLPPLALGAAR 964
Query: 511 VFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREF 570
LVGDP QLPATVIS A L Y SLF+R Q AG P +L QYRMHP++R FPSR F
Sbjct: 965 CVLVGDPQQLPATVISKAAGTLLYSRSLFERFQLAGCPTLLLTVQYRMHPQIRDFPSRYF 1024
Query: 571 YDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
Y L D V +++ P+ FFDI G+ES GS S+ NIDE F + ++
Sbjct: 1025 YQGRLTDSESVSTAPDEIYYKDSVLKPYLFFDISHGRESHRGGSVSYENIDEARFCVGVY 1084
Query: 631 HKLISMYPQLKSSS-QLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKD 689
L L + +I+PY+ Q+K + F + + + I TVD QG+E+D
Sbjct: 1085 LHLQRTLKSLGGGKVSVGVITPYKLQLKCLKIEFGNALSQDELQEIYINTVDAFQGQERD 1144
Query: 690 VAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQ 749
V I SCVRAS+ +GF+AD RRMNV +TRAK ++ V+G AS L + + W L+ A+ +
Sbjct: 1145 VIIMSCVRASN-HGVGFVADIRRMNVALTRAKRALWVMGNASALMKCEDWAALITDAKAR 1203
Query: 750 DCLFRV 755
+C +
Sbjct: 1204 NCFMEM 1209
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 105/403 (26%), Positives = 179/403 (44%), Gaps = 75/403 (18%)
Query: 51 LREVKDTYKDVDDYLATFEPLLFEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGFHLPS 110
L+ V + ++ +D+Y+ FEPLLFEE +AQ+ W+ E EA+ +
Sbjct: 418 LQSVPERFESMDEYVRVFEPLLFEECRAQLYST--------WE-----ELAEANSYM--K 462
Query: 111 VTYEADEVESISPNDLLLLSKEE----FKEGSTFPTTYAFALVEHCQANLLRL----RMY 162
V + E D++L S E FKEG + E ++ R+ R Y
Sbjct: 463 VRIKFIERRERGWYDVILNSVNECKWAFKEGDVAVLSNPVPESEGEHDDVGRVAGTVRRY 522
Query: 163 LA-------GEVIHIN-KDAVKSQRLLNIHSLITSSVSAVEKRLFSLKIC-SLSTIAREY 213
+ G ++H DA S ++ + ++ K ++ L + S++T REY
Sbjct: 523 IPVDTRDPHGAILHFYVGDAYDSGSKIDDNHILRK---LKPKEIWHLTVLGSIATTQREY 579
Query: 214 LALRSVGSL--PFKDLILSAS-EKSSGSQDQSWKIPGLLHE----YIKENHNASQLEAIH 266
+AL + L ++ IL S E+ +Q+ +P ++ + NA QL AIH
Sbjct: 580 VALHAFSQLNPQMQNAILKPSPEQFPNYGEQTPTVPDCFTPSFAGHLHRSFNAPQLAAIH 639
Query: 267 EGLLRKA--------------FVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLRE 312
+ A F L+QGPPGTGKT T+ G+L+ ++H + + L++
Sbjct: 640 WAAMHTAAGTSSGVKRQDPWPFTLVQGPPGTGKTHTVWGMLN-VIHLVQYQQYYTSLLKK 698
Query: 313 IKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNSSRRY 372
+ E Y +S + + D ++ + D F T P++
Sbjct: 699 L-------APESYKQVNESSSDNIVSGSIDEVLQ-NMDQNLFRTL-----PKLC-----A 740
Query: 373 RVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGL 415
+ R+LVCAPSN+A DE++ R+L+ G D +R Y P + R+G+
Sbjct: 741 KPRMLVCAPSNAATDELLSRVLDRGFIDGEMRVYRPDVARVGV 783
>gi|390603202|gb|EIN12594.1| hypothetical protein PUNSTDRAFT_118369 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 1879
Score = 252 bits (643), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 137/324 (42%), Positives = 198/324 (61%), Gaps = 8/324 (2%)
Query: 433 KRDDSAADKQKHGATRKD--RDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIID 490
+R D D+QK + D R R+ +L EA ++CSTLS +G +L L D+VIID
Sbjct: 1421 QRLDKLRDQQKSASRSLDAARRKYRTEVLQEADVICSTLSGAGHDVLEALE--IDLVIID 1478
Query: 491 EAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQR-AGYPV 549
EAAQA+E +TL+PL CK+ +VGDP QLP TV+S A Y SLF RL + +
Sbjct: 1479 EAAQAIELSTLIPLKYPCKRCVMVGDPQQLPPTVLSQEACKYQYNQSLFVRLLKDQPEAI 1538
Query: 550 KMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKES 609
+L QYRMHPE+ PS+ FYD L+DG D+ + T + WH + FGP+ FF+++ G+E
Sbjct: 1539 HLLSIQYRMHPEISRLPSQIFYDGRLQDGPDMAEKTKQPWHRHAKFGPYRFFNVNRGQE- 1597
Query: 610 QPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGV 669
+P + S +N E + L+ +L + + ++ ++S YR Q+ + + F++ FG
Sbjct: 1598 EPGRAKSLMNKAECQVAVALYTRLRREFSSIDLDFRVGVVSMYRAQIFEMRRAFEQRFGA 1657
Query: 670 ESQKVVDITTVDGCQGREKDVAIFSCVRA-SDKKSIGFLADYRRMNVGITRAKSSILVVG 728
E VD TVDG QG+EKDV I SCVRA ++ S+GFL+D RRMNV +TRA+SS+ V+G
Sbjct: 1658 EIVGKVDFNTVDGFQGQEKDVIILSCVRAGANLHSVGFLSDTRRMNVALTRARSSLFVLG 1717
Query: 729 CASTLRE-DKHWNNLVKSAEKQDC 751
+ TL DK W+ +V A + C
Sbjct: 1718 HSPTLENGDKTWSKIVNDARSRSC 1741
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 126/453 (27%), Positives = 190/453 (41%), Gaps = 107/453 (23%)
Query: 19 KIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKA 78
+ +L WDY N+ K+ + L V D+++D D Y + FEPLL E A
Sbjct: 1028 RAVLSWDY------DHNGNEPPFKEPPK----LLRVPDSFRDHDQYRSVFEPLLLLECWA 1077
Query: 79 QIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADEVE-SISPNDLLLLSKEEFKEG 137
QI+Q KD E + ++ +L+ D + E+ + S+ D++LL + E K
Sbjct: 1078 QIVQSKD-EPAETYECQLISRQFVDDWMDVDITIGESVRKDWSLGETDIVLLRQPESK-- 1134
Query: 138 STFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSAVEKR 197
+A L +++ Y A I S R SL ++ V
Sbjct: 1135 ---------------RAMLAKVQTYRASPR-GIQATLRCSNRAGGDSSLQLNTTWRVR-- 1176
Query: 198 LFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIKENH 257
K+ SLST+ REY +L +LP+ D G + P L + +K
Sbjct: 1177 ----KVFSLSTLHREYASLM---ALPYYDFFHHIMRPRLGGK------PRLQDDEVKSAM 1223
Query: 258 -----NASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLRE 312
N Q +A+ L ++F LIQGPPGTGKT TI GL+ A L +
Sbjct: 1224 KAYGLNEPQAKAVLSSLRAESFSLIQGPPGTGKTSTICGLVQAYLAS------------- 1270
Query: 313 IKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNSSRRY 372
+R P + GRA T ++ P
Sbjct: 1271 -RRKPATNIQA-----GRA------------------------TAASDTAPV-------- 1292
Query: 373 RVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGL-KAHH-SVNSVAIDHLV 430
+VLVCAPSN+A+DE+ R L G+ R PK+VR+G KA + SV +A+D LV
Sbjct: 1293 -KKVLVCAPSNAAIDEVASR-LKEGLSGSGKRGIQPKVVRVGADKALNISVKDIALDALV 1350
Query: 431 EQKRDDSAADKQKHGATRKDRDSIRSAILNEAV 463
EQK + + K+ + + + ++R I EAV
Sbjct: 1351 EQKMNAAPNAKELNKDSNAEIIALRQEI--EAV 1381
>gi|110740248|dbj|BAF02022.1| hypothetical protein [Arabidopsis thaliana]
Length = 466
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 135/306 (44%), Positives = 182/306 (59%), Gaps = 2/306 (0%)
Query: 451 RDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQ 510
R S+ ++ NEA IV +T+S SG L S+L HGFD+V+IDEAAQA E L PLA G +
Sbjct: 60 RASLEASFANEAEIVFTTVSSSGRKLFSRLTHGFDMVVIDEAAQASEVGVLPPLALGAAR 119
Query: 511 VFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREF 570
LVGDP QLPATVIS A L Y SLF+R Q AG P +L QYRMHP++R FPSR F
Sbjct: 120 CVLVGDPQQLPATVISKAAGTLLYSRSLFERFQLAGCPTLLLTVQYRMHPQIRDFPSRYF 179
Query: 571 YDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
Y L D V +++ P+ FFDI G+ES GS S+ NIDE F + ++
Sbjct: 180 YQGRLTDSESVSTAPDEIYYKDSVLKPYLFFDISHGRESHRGGSVSYENIDEARFCVGVY 239
Query: 631 HKLISMYPQLKSSS-QLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKD 689
L L + +I+PY+ Q+K + F + + + I TVD QG+E+D
Sbjct: 240 LHLQRTLKSLGGGKVSVGVITPYKLQLKCLKIEFGNALSQDELQEIYINTVDAFQGQERD 299
Query: 690 VAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQ 749
V I SCVRAS+ +GF+AD RRMNV +TRAK ++ V+G AS L + + W L+ A+ +
Sbjct: 300 VIIMSCVRASN-HGVGFVADIRRMNVALTRAKRALWVMGNASALMKCEDWAALITDAKAR 358
Query: 750 DCLFRV 755
+C +
Sbjct: 359 NCFMEM 364
>gi|395331022|gb|EJF63404.1| hypothetical protein DICSQDRAFT_102653 [Dichomitus squalens LYAD-421
SS1]
Length = 1922
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 137/338 (40%), Positives = 197/338 (58%), Gaps = 9/338 (2%)
Query: 426 IDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFD 485
+ H +++ +D +D + ATR+ R+ +L EA ++CSTLS S L + F+
Sbjct: 1458 LTHQLDKVKDKQKSDYRTLDATRR---RFRNEVLQEADVICSTLSASAYEYLESFD--FE 1512
Query: 486 VVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRA 545
VVIIDEAAQA+E ++L+P+ C+ +VGDP QLP TV S A LGY SLF RLQ++
Sbjct: 1513 VVIIDEAAQAIELSSLIPMKYRCRTCIMVGDPQQLPPTVKSQEACRLGYDQSLFVRLQKS 1572
Query: 546 GY-PVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIH 604
V +L QYRMHP++ PS FYD L DG ++ T R WH + FG + FF +
Sbjct: 1573 QPDAVHLLSIQYRMHPDISQLPSNLFYDGRLSDGPEMAAKTKRPWHNHPKFGTYRFFSVE 1632
Query: 605 EGKESQPAGSG-SWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERF 663
G E G+G S +N E + L+++LI + ++ +IS YR Q+ + + F
Sbjct: 1633 SGTEENMPGTGHSLVNRSEAQVAVALYNRLIKEFSSTDFDFKVGVISMYRGQIVELKRAF 1692
Query: 664 KETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDK-KSIGFLADYRRMNVGITRAKS 722
++ FG E VD TVDG QG+EKD+ I SCVR+ +++GFL D RRMNV +TRAK+
Sbjct: 1693 RQRFGEEVLSTVDFNTVDGFQGQEKDIIILSCVRSGPSLQTVGFLRDVRRMNVALTRAKA 1752
Query: 723 SILVVGCASTL-REDKHWNNLVKSAEKQDCLFRVSKPY 759
S+ V+G A TL R D W +V +A + L + Y
Sbjct: 1753 SLFVLGNAPTLERSDDIWRKIVDNARSRTSLIKADVAY 1790
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 117/286 (40%), Gaps = 54/286 (18%)
Query: 19 KIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKA 78
+ +L W+Y + N K L V D + D + + +EP+LF E+
Sbjct: 1078 RTLLSWNY-----------EHNGPMPPGEKPRLSSVPDRFGDYAHFRSVYEPMLFLELWN 1126
Query: 79 QIIQKKDEEEVQEWKLRLVMECGEADGFHLP-SVTYEADEVESISPNDLLLLSKEEFKEG 137
Q+++ K E+ ++ R++ + L S+ + S++ D++LLS K
Sbjct: 1127 QLVESK-EQPLESHDCRILSRQYTDEYIDLEVSIEGSVGKEWSLAETDIVLLSSSNAK-- 1183
Query: 138 STFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSAVEKR 197
+ L + + Y A + I + I S +
Sbjct: 1184 ---------------RRVLGKAQSYRASYI--------------GIQATIRYLASGGDPG 1214
Query: 198 L-----FSL-KICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHE 251
L +SL K+ SLSTI REY AL ++ D IL D S ++ ++
Sbjct: 1215 LQVGTSWSLAKVLSLSTIIREYGALMALPHYDLLDSILRTQLPKPNKVD-SGEVQRVMKA 1273
Query: 252 YIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAIL 297
Y N N Q AI + L + F LIQGPPGTGKT TI GL+ L
Sbjct: 1274 Y---NVNEPQANAILKSLDTEGFALIQGPPGTGKTSTICGLVQLYL 1316
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 43/61 (70%), Gaps = 3/61 (4%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGL-KAHH-SVNSVAIDHLVEQ 432
++L+CAPSN+A+DEI R L G+ R+ PK+VRIG KA + SV V++++L++Q
Sbjct: 1334 KILLCAPSNAAIDEIAFR-LKEGVSGAGHRAEHPKVVRIGAPKAMNLSVRDVSLEYLMDQ 1392
Query: 433 K 433
K
Sbjct: 1393 K 1393
>gi|298715587|emb|CBJ28140.1| hypothetical protein Esi_0092_0081 [Ectocarpus siliculosus]
Length = 1244
Score = 248 bits (633), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 136/338 (40%), Positives = 198/338 (58%), Gaps = 11/338 (3%)
Query: 431 EQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIID 490
E KR AA + R S+ +L+EA +V STL+ SG + + + F+V+++D
Sbjct: 436 EHKRLTFAARAKTETREHSVRQSLEVTLLDEAHLVFSTLNSSGLPCMDQTSP-FEVLVVD 494
Query: 491 EAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVK 550
EAAQ+VE +T++PL GC+ LVGDP QLPATV S + Y SLF+RL+ +PV+
Sbjct: 495 EAAQSVEVSTIIPLRLGCRHCVLVGDPNQLPATVFSQGGKLSQYDRSLFQRLEANDHPVQ 554
Query: 551 MLKTQYRMHPEVRSFPSREFYDEALEDGSDVE-DYTTRDWHEYRCFGPFSFFDIHEGKES 609
ML QYRMHP + +FPS FYD L+DG +V +R +H + F PF FFD+ G+++
Sbjct: 555 MLDVQYRMHPTISAFPSATFYDGKLKDGGNVSMPAYSRAFHTHPIFQPFMFFDLTTGEQT 614
Query: 610 QPAGSGSWINIDEVDFVLLLFHKLISMYPQLKS---------SSQLAIISPYRHQVKQFQ 660
+ G GS N E + ++ L + + + ++ +ISPY Q+K +
Sbjct: 615 RRGGGGSLSNPMEAMLAVNVYVTLKRSFGGVGERGSGDEHGIAGRVGVISPYAKQIKVLK 674
Query: 661 ERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRA 720
E+F+E+ G + V+I+TVD QGREKDV I S VRA+ + IGFLAD RRMNV +TRA
Sbjct: 675 EKFEESLGRGWHEQVEISTVDAFQGREKDVIIVSTVRAAGSRGIGFLADVRRMNVALTRA 734
Query: 721 KSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRVSKP 758
+ + VVG A L + W L AE ++ L +V+ P
Sbjct: 735 RHGLFVVGSAEALSVNPKWKELADLAESREGLVKVTDP 772
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 99/223 (44%), Gaps = 46/223 (20%)
Query: 193 AVEKRLFSLKICSLSTIAREYLALRSVGSLPFK-DLILSASEKSSGSQDQSWKIPGLLHE 251
A ++ ++ + + SL REY ++ +G + + +L+ S+G+ + +P +
Sbjct: 116 ARDRAMYIMSLGSLRPTLREYDSVTGLGRVMLRANLLTGKPGGSTGNLVDNLGLP--FVQ 173
Query: 252 YIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLR 311
+++ N+SQ +AI EG + F LI+GPPGTGKT T+ LL+A LH R
Sbjct: 174 WLENKFNSSQKKAIEEGANSQGFTLIKGPPGTGKTTTLKALLNA-LHQ-----------R 221
Query: 312 EIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNSSRR 371
E R ++K R SP E P +
Sbjct: 222 EYNR-----YYDKLLQLARVSP--------------------------EETPAAWERLKN 250
Query: 372 YRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIG 414
+ +LV APSN A+D IV R+L G D N Y P + R+G
Sbjct: 251 FAPHILVTAPSNVAVDNIVSRILEEGFLDGNTNRYNPSMARVG 293
>gi|147844556|emb|CAN80584.1| hypothetical protein VITISV_038680 [Vitis vinifera]
Length = 500
Score = 248 bits (633), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 132/175 (75%), Positives = 149/175 (85%), Gaps = 4/175 (2%)
Query: 325 YNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNSSRRYRVRVLVCAPSNS 384
Y WG+ASPWL G NPRD I+P DGDDG FPTTGNELKPE+V SSR+YRVRVLVCAPSNS
Sbjct: 61 YVMWGQASPWLTGINPRDEIVPKDGDDGVFPTTGNELKPEIVTSSRKYRVRVLVCAPSNS 120
Query: 385 ALDEIVLRLLNTG--IRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQKRD--DSAAD 440
ALDEIVLRLLNTG +RDEN +Y PKIVRIGLK HHSV +V++D+LVEQK +S +D
Sbjct: 121 ALDEIVLRLLNTGTSVRDENDHAYNPKIVRIGLKPHHSVRAVSMDYLVEQKLSSMNSTSD 180
Query: 441 KQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQA 495
KQKHGA +DRDS+RS+IL+EA IV STLSFSGS+L SKLN GFDVVIIDEAAQA
Sbjct: 181 KQKHGAAGRDRDSVRSSILSEAAIVFSTLSFSGSSLFSKLNSGFDVVIIDEAAQA 235
>gi|389744605|gb|EIM85787.1| hypothetical protein STEHIDRAFT_58796 [Stereum hirsutum FP-91666 SS1]
Length = 2031
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 136/339 (40%), Positives = 204/339 (60%), Gaps = 9/339 (2%)
Query: 424 VAIDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHG 483
+ + +++ RD +D++ A R+ R +L +A ++CSTLS +G LL +L+
Sbjct: 1490 INLSQQIDRLRDQQKSDRRTLDANRR---KYRLKVLLDADVICSTLSGTGHELLEQLD-- 1544
Query: 484 FDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQ 543
FD++IIDEAAQA+E ++L+PL ++F+ DP QLP TVIS A Y SLF RLQ
Sbjct: 1545 FDMIIIDEAAQAIELSSLIPLKYRSSRIFMCTDPQQLPPTVISMEASKYMYNQSLFVRLQ 1604
Query: 544 R-AGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFD 602
+ V +L QYRMHP++ PS FY+ L+DG + + T R WH FG + FF+
Sbjct: 1605 KHRPDAVHLLSIQYRMHPDISQLPSALFYNGRLQDGPGMVEKTKRPWHTSPKFGTYRFFN 1664
Query: 603 IHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQER 662
+ G+ESQ S S++N EV + LFH+L + + ++ ++S YR Q+ +
Sbjct: 1665 VTNGQESQ-GSSHSYMNTAEVRIAVSLFHRLRQEFSSVDFDFRVGVVSMYREQIFSLRRA 1723
Query: 663 FKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDK-KSIGFLADYRRMNVGITRAK 721
F++ FG E VD TVDG QG+EKD+ I SCVRA +++GFLAD RRMNV +TR++
Sbjct: 1724 FEQRFGREIIGKVDFNTVDGFQGQEKDIIILSCVRAGPGVQTVGFLADVRRMNVALTRSR 1783
Query: 722 SSILVVGCASTL-REDKHWNNLVKSAEKQDCLFRVSKPY 759
+S+ ++G A TL R D++W +V A + LF V + Y
Sbjct: 1784 ASLFILGHAPTLERSDQNWKAIVTDARSRSRLFDVDEQY 1822
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 103/408 (25%), Positives = 157/408 (38%), Gaps = 106/408 (25%)
Query: 51 LREVKDTYKDVDDYLATFEPLLFEEVKAQIIQKKDEEE------------VQEWKLRLVM 98
L + + + D Y FEPLL E AQ++Q K+E++ + +W L +
Sbjct: 1119 LVAIPERFTDHAHYRRIFEPLLVLECWAQLLQSKEEQQEAFECKISSRQHIDDW---LDI 1175
Query: 99 ECGEADGFHLPSVTYEADEVESISPN-DLLLLSKEEFKEGSTFPTTYAFALVEHCQANLL 157
+ +G + D V PN D ++L K + + + F ++ +
Sbjct: 1176 DISITEGVDSNWFLIDTDIVRLYLPNSDKIILGKVQNFKANHFGE----------RSLQV 1225
Query: 158 RLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSAVEKRLFSLKICSLSTIAREYLALR 217
+R YL G + + + R+ K SLST+ REY AL
Sbjct: 1226 TVRCYLGGGTVDPGLNPGSTWRI--------------------SKAFSLSTLHREYAALV 1265
Query: 218 SVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIKENHNASQLEAIHEGLLRKAFVLI 277
++ D+IL D L K N N Q AI + + LI
Sbjct: 1266 AMEFYDLADVILRPRLAMKPFIDSD----ELQATQTKFNVNEPQAVAIASVMRTEGISLI 1321
Query: 278 QGPPGTGKTQTILGLLSAILHATPARVHSKGGLREIKRGPELPMHEKYNHWGRASPWLVG 337
QGPPGTGKT TI L+ A L R+ ++ GR+S
Sbjct: 1322 QGPPGTGKTSTICALVQAFLSK-----------RKTATNIQV---------GRSS----- 1356
Query: 338 ANPRDNIMPIDGDDGFFPTTGNELKPEVVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTG 397
P D + P +VL+CAPSN+A+DE+V R L G
Sbjct: 1357 -GPADKVPP---------------------------KKVLLCAPSNAAIDEVVHR-LKEG 1387
Query: 398 IRDENIRSYTPKIVRIGLKA--HHSVNSVAIDHLVEQKRDDSAADKQK 443
+ P +VR+G + SV V++D+LV+Q + + A KQK
Sbjct: 1388 ESGAGRKGRVPNVVRVGAPKAINISVQDVSLDNLVDQMLEANEASKQK 1435
>gi|392566307|gb|EIW59483.1| hypothetical protein TRAVEDRAFT_71533 [Trametes versicolor FP-101664
SS1]
Length = 1937
Score = 247 bits (631), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 137/337 (40%), Positives = 198/337 (58%), Gaps = 9/337 (2%)
Query: 426 IDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFD 485
+ H +++ +D +D + ATR+ R+ +L EA ++CSTLS S L + F+
Sbjct: 1473 LTHQLDKVKDKQKSDYRTLDATRR---RFRNEVLQEADVICSTLSASAYEYLESFD--FE 1527
Query: 486 VVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRA 545
+VIIDEAAQA+E ++L+P+ C+ +VGDP QLP TV S A LGY SLF RLQR+
Sbjct: 1528 LVIIDEAAQAIELSSLIPMKYRCRTCIMVGDPQQLPPTVKSQEACKLGYDQSLFVRLQRS 1587
Query: 546 -GYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIH 604
V +L QYRMHP++ PS FY L DG D+ + T R W + FG + FF++
Sbjct: 1588 QPEAVHLLSIQYRMHPDISQLPSNLFYGGRLLDGPDMAEKTKRAWQTHPKFGTYRFFNVQ 1647
Query: 605 EGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFK 664
G E AG S +N E + L+++L + ++ +IS YR Q+ + + F+
Sbjct: 1648 AGVEESGAGH-SLVNRAEAQVAVALYNRLCKEFSSANMDFKVGVISMYRGQILELRRAFQ 1706
Query: 665 ETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDK-KSIGFLADYRRMNVGITRAKSS 723
+ FG E +VD TVDG QG+EKD+ I SCVRA +++GFL D RRMNV +TRAK+S
Sbjct: 1707 QRFGEEVLSMVDFNTVDGFQGQEKDIIILSCVRAGPGVQTVGFLRDVRRMNVALTRAKAS 1766
Query: 724 ILVVGCASTL-REDKHWNNLVKSAEKQDCLFRVSKPY 759
+ V+G A TL R D+ W +V++A + L V Y
Sbjct: 1767 LFVLGNAPTLERSDETWRKIVENARSRSSLVNVDAAY 1803
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/267 (31%), Positives = 121/267 (45%), Gaps = 71/267 (26%)
Query: 202 KICSLSTIAREYLALRSVGSLPFKDLILSA--SEKSSGSQDQSWKIPGLLHEYIKENHNA 259
K+ SLST+ REY +L + LP DL+ S ++ S S+ S ++ ++ Y N
Sbjct: 1235 KVLSLSTLIREYASLMA---LPHYDLLDSVLHAQLSQPSRTDSGEVQKVMTTY---KVNE 1288
Query: 260 SQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLREIKRGPEL 319
Q AI + L + F LIQGPPGTGKT TI GL+ L AR
Sbjct: 1289 PQANAIIKSLATEGFALIQGPPGTGKTSTICGLVQLYL----AR---------------R 1329
Query: 320 PMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNSSRRYRVRVLVC 379
P H GR P + +P ++L+C
Sbjct: 1330 PKTSSVIHPGR---------PAERELP---------------------------KKILLC 1353
Query: 380 APSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIG-LKAHH-SVNSVAIDHLVEQKRD-D 436
APSN+A+DEI R L G+ R+ PK+VRIG LK+ + SV V++++L++QK + D
Sbjct: 1354 APSNAAIDEIAFR-LKEGVSGAGHRAEHPKVVRIGALKSMNLSVRDVSMEYLIDQKLNSD 1412
Query: 437 SAADKQKHGATRKDRDSIRSAILNEAV 463
K T R +RS + EAV
Sbjct: 1413 PGLKNTKEAGTELSR--VRSEL--EAV 1435
>gi|331213013|ref|XP_003307776.1| hypothetical protein PGTG_00726 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|309298179|gb|EFP74770.1| hypothetical protein PGTG_00726 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 2157
Score = 245 bits (626), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 144/387 (37%), Positives = 213/387 (55%), Gaps = 21/387 (5%)
Query: 404 RSYTPKIVRIGLKAHHSVNSVAIDHLVEQKRDDSAADKQK-HGATRKDRDSIRSAILNEA 462
R+ ++ RI K H + ++Q RD A K+ ATRK +R IL +A
Sbjct: 1602 RTLQEEVTRIRRKIHE------LSAKIDQARDQQDASKRYLDAATRK----LRMQILQDA 1651
Query: 463 VIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPA 522
+VCSTLS SG +S+L F+ V+IDEA Q VEPA+L+PL Q LVGDP+QLP
Sbjct: 1652 DVVCSTLSGSGHDYMSQLPFDFETVVIDEACQCVEPASLIPLRYNATQCILVGDPMQLPP 1711
Query: 523 TVISPVAEHLGYGTSLFKRLQRAGYPVK-MLKTQYRMHPEVRSFPSREFYDEALEDGSDV 581
TV+S A GY SLF R+QR V +L QYRMHP + +FPS+ FYD L DG ++
Sbjct: 1712 TVLSQTASQAGYDQSLFVRMQRNAPDVAHLLSIQYRMHPSISTFPSKAFYDSKLLDGPEM 1771
Query: 582 EDYTTRDWHEY-RCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQL 640
E + WH+ F P++F+ +E + A S +N E + ++ ++ + YP +
Sbjct: 1772 ESKAVQPWHQSGSLFPPYAFYHPVGAREERGA-HHSLMNRTEASLAVSIYWRIANDYPHI 1830
Query: 641 KSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRAS- 699
+ ++ II+ Y QV + + + + F + +D+ TVDG QG+EKD+ I SCVR
Sbjct: 1831 DFAYRVGIITGYAAQVGEIRRQLRAKFPASTVAAIDVNTVDGFQGQEKDIIILSCVRGGR 1890
Query: 700 -DKKS---IGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRV 755
D S IGFL D RRMNV +TRAKSS+ ++G + L +D W LV+ A + + V
Sbjct: 1891 DDNNSGGGIGFLKDIRRMNVALTRAKSSMFIIGNRAVLSQDPTWKALVEDAAGRSLISEV 1950
Query: 756 SKPYASFFSDENLESMRKNATTDNVQG 782
+ +F+S + + + T + G
Sbjct: 1951 TS--QTFYSTSSAPIVSRARQTSDSGG 1975
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 102/262 (38%), Gaps = 29/262 (11%)
Query: 57 TYKDVDDYLATFEPLLFEEVKAQIIQKKDE---EEVQEWKLRLVMECGEADGFHLPSVTY 113
++ YL+ EPLL E QI Q K+ E + +V D + +
Sbjct: 1247 SFGSFSHYLSCTEPLLMCETWQQISQAKESVLSGEKAPIPIEIVGRTSVDDFIEIYTTVK 1306
Query: 114 EA--DEVESISPNDLLLLSKEEFKEGSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHIN 171
E S DL+L+ + + S +L + L LRM+ I+
Sbjct: 1307 HGLLPERTYFSEADLVLVRSNDPQSPSRCIMAKVISLSRKHEWFELNLRMHFGSARQDIS 1366
Query: 172 KDAVKSQRLLNIHSLITSSVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSA 231
V + +H +CSLST RE+ ALRS+ L D IL A
Sbjct: 1367 GHMVPKTKWSVLH------------------LCSLSTTHREWAALRSLPYLTLGDDILRA 1408
Query: 232 SEKSSGSQDQSWKIPGLLHEYIK-ENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTIL 290
+ L + +K + N Q AI L F LIQGPPGTGKT TI+
Sbjct: 1409 HATPPAPIAEEH-----LTKVMKCQKVNEPQGRAIISALATPGFSLIQGPPGTGKTSTIV 1463
Query: 291 GLLSAILHATPARVHSKGGLRE 312
GL+ A + + P GG ++
Sbjct: 1464 GLIGAFIASRPKVGDPAGGGKQ 1485
>gi|328871491|gb|EGG19861.1| Regulator of nonsense transcripts [Dictyostelium fasciculatum]
Length = 1534
Score = 245 bits (625), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 151/374 (40%), Positives = 212/374 (56%), Gaps = 40/374 (10%)
Query: 373 RVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAH------HSVNSVAI 426
+ ++LVCAPSN+A+DEI +R L G+ E + P VR+G + H + + I
Sbjct: 665 QCQILVCAPSNTAVDEIGIRFLRDGLVSEEEENERPGAVRLGSRLEVINEKLHPICTSRI 724
Query: 427 DHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDV 486
D L KR R ++ A IV STLS S S +L+K +
Sbjct: 725 DDL---KR--------------------RIMMIRSARIVLSTLSGSASTMLAKAGCRPSI 761
Query: 487 VIIDEAAQAVEPATLVPLATGCK-QVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRA 545
+I+DE+ Q+ EP+TL+PL + +V L+GDP QLP TV S ++ Y SLF+RL
Sbjct: 762 IIVDESTQSCEPSTLIPLLRNFRSKVILIGDPKQLPPTVFSDISSRFNYDVSLFERLSNY 821
Query: 546 GYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHE 605
PV ML TQYRMHP + FPS +FY L+DG +V Y+ +++ + +GP +F+ I +
Sbjct: 822 -LPVHMLDTQYRMHPSISKFPSDQFYQAKLKDGENVVKYSNSFYNDKK-YGPINFYHIPD 879
Query: 606 GKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKE 665
+E G N+ E+ V +L KL+ YP++K S + II+PY+ Q K+ E K
Sbjct: 880 SQEDTTIGKSIKNNL-EIKLVYVLLKKLVQEYPEVKKMS-VGIITPYKLQKKELLEA-KG 936
Query: 666 TFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSIL 725
F E VV + TVDG QG EKD+ IFSCVR K IGFL D RR+NVGITRA+ +I
Sbjct: 937 AFN-EKMDVV-VNTVDGFQGAEKDIIIFSCVR---NKKIGFLRDTRRINVGITRARRAIY 991
Query: 726 VVGCASTLREDKHW 739
VVG +S L +D +W
Sbjct: 992 VVGYSSLLEQDPNW 1005
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 118/269 (43%), Gaps = 42/269 (15%)
Query: 57 TYKDV---DDYLATFEPLLFEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTY 113
+YKD +Y+ PL+FEE++ QI Q+ +E V+ + + GE D + ++
Sbjct: 408 SYKDERTHGEYIQDMVPLMFEELRTQITQECEENGVE------IRDNGEMDYIRIKTMPI 461
Query: 114 EADEV----------------------ESISPNDLLLLSKEEFKEGSTFPTTYAFALVEH 151
D + +++ +DL+LL KEG P + F LV+
Sbjct: 462 SIDILAETRDNVEGVCLKFCQRLNDPDQALFQSDLMLLV---IKEGVKRPV-HVFGLVDS 517
Query: 152 CQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSAVEKRLFSLKICSLSTIAR 211
+ R L I I +D + + + ++ +I +L+T R
Sbjct: 518 AVTD--RKNPSLKRYSIRILEDQTNYPHTTEFIDALYD-IKKSKGKVHIARISNLTTFQR 574
Query: 212 EYLALRSVGSLPFKDLILSASEKSSGSQDQ-SWKIPGLLHEYIKENHNASQLEAIHEGLL 270
EY A++ S LIL+ + + S+ IP L + K N SQ+ AI + ++
Sbjct: 575 EYNAIQRFISHSLGPLILTPEQYLENKKPSPSYAIPKRLQD--KLPLNPSQMIAIKQCMI 632
Query: 271 RKAFVLIQGPPGTGKTQTILGLLSAILHA 299
+ LIQGPPGTGKT TIL LL I H+
Sbjct: 633 QDELTLIQGPPGTGKTTTILSLL-GIYHS 660
>gi|405124191|gb|AFR98953.1| helicase sen1 [Cryptococcus neoformans var. grubii H99]
Length = 2142
Score = 245 bits (625), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 238/818 (29%), Positives = 355/818 (43%), Gaps = 212/818 (25%)
Query: 10 DEASIFRFCKIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFE 69
D + ++R+ IL WD + Q + K +R V T+ + Y
Sbjct: 1283 DLSPLYRY---ILSWD-----PDHQGPSPPYGAKFAAELSDMRVVPTTFDNPRQYERIML 1334
Query: 70 PLLFEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADEVESISPNDLLLL 129
PL +E+ +Q + ++ G A + S YE D VE DL+++
Sbjct: 1335 PLFLQELWSQCANDQ-------------IQVGPAVPVEVASRQYEDDFVEI----DLMVI 1377
Query: 130 SKEEFKEGSTFPTTYAFALVEHCQ-ANLLRLRMY-----LAGEVIHINKDAVKSQRLLNI 183
+F +C ++L+ LR + +++ K S I
Sbjct: 1378 GAGDF----------------YCNDSDLVTLRQPNNPKGIFAKIMAFKKHPKGSMVRARI 1421
Query: 184 HSLITSSVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSW 243
S++ + R K SLST RE+ AL+ LP+ + L S+ +G +S
Sbjct: 1422 MSVMDQKELCGKSRWQLRKHVSLSTSIREFAALKG---LPWYESSL-LSDILAG---RSA 1474
Query: 244 KIPGLLHEYIKENH-----NASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILH 298
IP L E I++ N Q +A+ L K F LIQGPPGTGKT+TI G
Sbjct: 1475 IIPKLSTEKIEDTMKCLSLNEPQAKAVLGALEVKGFALIQGPPGTGKTKTISG------- 1527
Query: 299 ATPARVHSKGGLREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTG 358
LVG + +PI D
Sbjct: 1528 ------------------------------------LVGKWMSERRIPISVDG------- 1544
Query: 359 NELKPEVVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKA- 417
+P V + ++LVCAPSN+A+DE+ RL+ G+ + + Y P IVR+G+ A
Sbjct: 1545 ---QPPV-------KPKLLVCAPSNAAIDEVCKRLI-LGVPNPDGGQYNPNIVRVGIDAS 1593
Query: 418 -HHSVNSVAIDHLVEQKRDDSAA----------------------DKQK----------- 443
+ +V V++D LVE +S+ DKQ+
Sbjct: 1594 VNIAVKDVSLDSLVEALVSNSSGRNVGGEYGRIQAELDDVKQQIKDKQEAIKLAQDHDEK 1653
Query: 444 --------HG----------ATRKDRDSIRSA--------------ILNEAVIVCSTLSF 471
H A+ K +D+ R A IL +A I+C+TLS
Sbjct: 1654 RKVLEDEYHALITRRTQLGQASSKAKDAARDATRHLDGARRAARDQILKDADIICATLSG 1713
Query: 472 SGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEH 531
+G L+ H F+ VIIDEAAQA+E + L+PL GCK+ +VGDP QLP T S AE
Sbjct: 1714 AGHDTLAA--HTFETVIIDEAAQAIEMSCLIPLKYGCKRCIMVGDPNQLPPTTFSMSAEK 1771
Query: 532 LGYGTSLFKRL-QRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWH 590
L Y SLF R+ +R V++L QYRMHP + PS+ FY L+DG + T WH
Sbjct: 1772 LQYNKSLFVRMAKRDVSHVQLLSIQYRMHPFISELPSKVFYHGQLKDGPSMAKKTAAIWH 1831
Query: 591 EYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMY-PQLKSSSQLAII 649
+ FGP+ FF+I EG E + S N E + L+ +L + + ++ + ++ +I
Sbjct: 1832 QRNIFGPYRFFNI-EGTEMKTGTSTK--NPAEALAAVELYRRLSADFGTRVNLAMRIGVI 1888
Query: 650 SPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLAD 709
S YR Q+ + + +F E FG ++V+ TVDG QG+EKD+ I S
Sbjct: 1889 SMYREQLWELKRKFTEAFGSTILELVEFNTVDGFQGQEKDIIILS--------------- 1933
Query: 710 YRRMNVGITRAKSSILVVGCASTL-REDKHWNNLVKSA 746
RMNV +TRAKSS+ + G STL R D+ W +V+ A
Sbjct: 1934 --RMNVALTRAKSSLFIFGNGSTLERSDERWKIIVQDA 1969
>gi|395506275|ref|XP_003757460.1| PREDICTED: probable helicase senataxin [Sarcophilus harrisii]
Length = 2753
Score = 244 bits (624), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 233/846 (27%), Positives = 359/846 (42%), Gaps = 181/846 (21%)
Query: 8 PQDEASIFRFCKIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLAT 67
P ++ F K IL W Y V D+ D + LR V T++D +DYL+
Sbjct: 1752 PMRQSVFDSFVKEILKWKYEMFV-----NFDQFGPPADLCQALLRPVPVTFQDSEDYLSV 1806
Query: 68 FEPLL----FEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADEVESISP 123
F PL+ FE + + I +E E LR G+ + E++ + + P
Sbjct: 1807 FFPLMILNTFETIAQEWIDNPKKENAYELHLR-SFSPGDINCGQFIVCLQESEMAKQLHP 1865
Query: 124 --NDLLLLSKEEFKEGSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLL 181
NDL+ L P + + ++Y G V + +V+
Sbjct: 1866 KENDLVFL----------VPKKLLGKKKAAEEGEMKTQQVYHCGYVSQFRRSSVRHNSQF 1915
Query: 182 NIHSLITSSVSA---VEKRLFSLKICSLSTIAREYLALRSVGS---LPFKDLILSASEKS 235
+ I + + + + + + I SL T R+ AL +G +P +IL+ S
Sbjct: 1916 EGYLSIQTQGNLSFHINESVDCIVISSLVTTQRKLKALSLLGRNSLIPLTRVILNPSTSD 1975
Query: 236 SGSQDQSWKIPGLLHEYIKENHNASQLEAIH-------EGLLRKAFVLIQGPPGTGKTQT 288
+D P + Y+K+ +N Q +AI + L LI GPPGTGK++T
Sbjct: 1976 FCPRDSLNTAPEKILAYLKD-YNEDQKKAIEVAYAMVKQPPLIAKICLIHGPPGTGKSRT 2034
Query: 289 ILGLLSAILHATPARVHSKGGLREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPID 348
I+GLL IL P K+G D
Sbjct: 2035 IVGLLYRILTEKP------------KKG-------------------------------D 2051
Query: 349 GDDGFFPTTGNELKPEVVNSSRRYRVRVLVCAPSNSALDEIVLRLL-------------- 394
D+ +++ R RVLVCAPSN+A+DE++ +++
Sbjct: 2052 SDENL--------------NAKFKRNRVLVCAPSNAAVDELMKKIILEFKEKCQDKKNPL 2097
Query: 395 -NTG----IRDENIRSYTPKIVRIGL--KAHHSVNS-----------------VAIDHLV 430
N G +R +S ++++ L + +H + V +D L
Sbjct: 2098 GNCGDINLVRLGPEKSINNEVLKFSLDSQVNHRMKKDFPNHIQEMHERKEYLDVKLDKLS 2157
Query: 431 EQKRDDSAADKQKHGATRKDRDSIR-----------------------SAILNEAVIVCS 467
Q+ D QK +KD + R S+I+ E+ ++C
Sbjct: 2158 RQRALDRCEKGQKVDRHQKDEEIARISKERQQLASKIKEVRGRPQEAQSSIILESHVICC 2217
Query: 468 TLSFSGSALLSKL--NHG---FDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPA 522
TLS SG LL G F VI+DEA Q+ E TL P C ++ LVGDP QLP
Sbjct: 2218 TLSTSGGLLLESAFRRQGCIPFSCVIVDEAGQSCEIETLTPFIHRCNKLILVGDPKQLPP 2277
Query: 523 TVISPVAEHLGYGTSLFKRLQR-----------AGYPVKMLKTQYRMHPEVRSFPSREFY 571
TVIS A+ GY S+ RL + + PV L QYRMHP++ FPS Y
Sbjct: 2278 TVISVKAQEYGYDQSMMARLYKHLEEQVKQNVISRSPVLQLTVQYRMHPDICLFPSSYIY 2337
Query: 572 DEALEDGSDVED-YTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
+ L+ E+ T DW F P+ FD+ +G E + S++NI E+ V+ +
Sbjct: 2338 NRTLKTNRLTEESRCTSDWP----FQPYLVFDVGDGSERR--EHDSYVNIQEIKLVMEII 2391
Query: 631 HKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDV 690
KLI + + + II+ Y+ Q Q+ + F E + ++ TVD QGR+KD
Sbjct: 2392 -KLIKDRRKDITIRNIGIITHYKAQKMMIQQELDKEF--EKTRPGEVDTVDAFQGRQKDC 2448
Query: 691 AIFSCVRA-SDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQ 749
I +CVRA + + SIGFLA +RMNV ITRAK S+ ++G TL E++HWN+L++ A+K+
Sbjct: 2449 IIVTCVRANASQGSIGFLASLQRMNVTITRAKYSLFILGHLRTLMENQHWNHLIQDAQKR 2508
Query: 750 DCLFRV 755
+ R
Sbjct: 2509 GAIVRT 2514
>gi|336370055|gb|EGN98396.1| hypothetical protein SERLA73DRAFT_109860 [Serpula lacrymans var.
lacrymans S7.3]
gi|336382798|gb|EGO23948.1| hypothetical protein SERLADRAFT_450249 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1935
Score = 244 bits (624), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 139/338 (41%), Positives = 203/338 (60%), Gaps = 20/338 (5%)
Query: 434 RDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAA 493
+D +D++ ATR+ R +L EA ++CSTLS +G +L +L+ F++VIIDEAA
Sbjct: 1473 KDKQKSDRRTLDATRR---KFRVEVLQEADVICSTLSGAGHDVLEQLD--FEMVIIDEAA 1527
Query: 494 QAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQR-AGYPVKML 552
QA+E ++L+PL C++ +VGDP QLP TV+S A Y SLF RLQ+ V +L
Sbjct: 1528 QAIELSSLIPLKFKCQRCIMVGDPQQLPPTVLSQEACKFQYNQSLFVRLQKHRPEAVHLL 1587
Query: 553 KTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPA 612
QYRMHP++ PSR FY L DG D++ T + WH + FG + FF++ +G+E Q A
Sbjct: 1588 SIQYRMHPDISQLPSRIFYQGRLLDGPDMDVKTKQPWHSHPKFGTYRFFNVSKGQE-QEA 1646
Query: 613 GSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQ 672
G S N E + ++ +L +P + ++ I++ YR QV + + F+ FG +
Sbjct: 1647 GGHSLKNNLESQVAVAMYSRLCKEFPAIDFDFRVGIVTMYRGQVLELKRAFQRRFGSDII 1706
Query: 673 KVVDITTVDGCQGREKDVAIFSCVRASDK-KSIGFLADYRRMNVGITRAKSSILVVGCAS 731
V TVDG QG+EKDV I SCVRA +S+GFLAD RRMNV ITRA+SS+ ++G A
Sbjct: 1707 SKVHFHTVDGFQGQEKDVIILSCVRAGPGLQSVGFLADVRRMNVAITRARSSLFILGNAP 1766
Query: 732 TL-REDKHWNNLVKSAEKQDCLFRVSKPYASFFSDENL 768
TL R D++W ++V A + SFF+D ++
Sbjct: 1767 TLERSDENWRSIVNDARSR-----------SFFTDTDV 1793
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 116/405 (28%), Positives = 167/405 (41%), Gaps = 96/405 (23%)
Query: 51 LREVKDTYKDVDDYLATFEPLLFEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGFHLPS 110
L V D + D Y+ FEPLL E +Q++Q K+E+E ++ +++ D L
Sbjct: 1096 LIHVPDMFTDHRQYVNVFEPLLLLECWSQLLQSKEEKE-DSYECKILSRRFIDDWLDLDI 1154
Query: 111 VTYEADEVE-SISPNDLLLLSKEEFKEGSTFPTTYAFALVEHCQANL-LRLRMYLAGEVI 168
EA + + + D++LL + K+ T A QA+L +R + +
Sbjct: 1155 TIPEAVQKDWYLGETDVVLLRHLDGKKCILAKTQSYKATPLGIQASLRCHIRANNSDPGL 1214
Query: 169 HINKDAVKSQRLLNIHSLITSSVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLI 228
IN + RL K+ FSL ST+ REY AL +LP+ DL
Sbjct: 1215 QINT----TWRL---------------KKTFSL-----STVHREYGAL---VALPYYDLF 1247
Query: 229 LSASEKSSGSQDQSWKIPGLLHEYIKE-----NHNASQLEAIHEGLLRKAFVLIQGPPGT 283
EK Q +P L + IK+ + N Q +AI L + FVLIQGPPGT
Sbjct: 1248 ----EKIMKPQISP--MPNLDNSTIKQAMAAYSVNEPQAKAILGSLQAQGFVLIQGPPGT 1301
Query: 284 GKTQTILGLLSAILHATPARVHSKGGLREIKRGPELPMHEKYNHWGRASPWLVGANPRDN 343
GKT TI GL+ A + P + H GR G P D
Sbjct: 1302 GKTSTICGLVEAFMSRRPRPATAI-------------------HVGR------GQRPTDK 1336
Query: 344 IMPIDGDDGFFPTTGNELKPEVVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENI 403
P + L+CAPSN+A+DE+ R L G R
Sbjct: 1337 APP---------------------------KKALLCAPSNAAVDEVAHR-LKEGYRGAER 1368
Query: 404 RSYTPKIVRIGLK--AHHSVNSVAIDHLVEQKRDDSAADKQKHGA 446
R K+VR+G + SV +++D+LVEQK + A + GA
Sbjct: 1369 RGAALKVVRVGNDKVMNISVKDISLDYLVEQKINSDATKEPPKGA 1413
>gi|346976317|gb|EGY19769.1| helicase SEN1 [Verticillium dahliae VdLs.17]
Length = 1968
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 215/720 (29%), Positives = 330/720 (45%), Gaps = 89/720 (12%)
Query: 21 ILGWDYFRLVKESQERNDKNS-KKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKAQ 79
IL WD F E ND + +K R V DTY + Y TF LL E
Sbjct: 1137 ILEWDIFF------EGNDPPTLEKCAR-------VADTYPHPEAYKQTFWKLLVSEAWRS 1183
Query: 80 IIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADEVES----ISPNDLLLLSKEEFK 135
+ KDE + + +++ D F VT ++E+ +S D++LLS+
Sbjct: 1184 FVTSKDEATSKPFGIKIASRMS-IDRFL--EVTASMPKLENKERGLSEGDIILLSQ---- 1236
Query: 136 EGSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSAVE 195
S+ P + H A + + KD ++ LN+ + S +
Sbjct: 1237 --SSNPLSDPNE--PHALARIWK---------TAYKKDMLEVTYRLNMRNNPLQSNLHIS 1283
Query: 196 KRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIKE 255
L++ KI +++TI REY AL S+ D +L A E S + + +L Y
Sbjct: 1284 AELYAAKITNMTTIEREYAALESLKYYDLMDEVLKA-EPSPVLKYSDELVNQVLTNY--- 1339
Query: 256 NHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLREIKR 315
N Q +AI F LIQGPPGTGKT+TI+ ++ A++ + GG+R
Sbjct: 1340 TLNPGQAKAILGARDNDGFTLIQGPPGTGKTKTIVAMVGALMTGN---IPQSGGVRLATG 1396
Query: 316 GPELPMHEKYNHWGRASPWLVGA--NPRDNIMPIDGDDGFFPTTGNELKPEVVNSSRRYR 373
G G+ LV A N + + + G +GN+ K +N R R
Sbjct: 1397 GAN-------QAAGQKKKILVCAPSNAAVDELVLRLKQGIRTMSGNDHK---INILRLGR 1446
Query: 374 VRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSV--------A 425
+ A + LDE+V + L E +++ K+ VN +
Sbjct: 1447 SDAINAAVRDVTLDELVKKRLEGDNTAEKLKTARDKLHSDAAGIRDKVNELRPALEAARG 1506
Query: 426 IDHLVE---QKRDDSAADKQKHGATRKD----------------RDSIRSAILNEAVIVC 466
D +E Q++ DS +Q T+ D R ++ IL+ A ++C
Sbjct: 1507 TDRELEMTLQRQFDSLKREQFRIGTQIDADKESGQTISREVEIKRKQVQQEILDSAQVLC 1566
Query: 467 STLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVIS 526
+TLS SG + L+ F+ VIIDEAAQ VE + L+PL GC + LVGDP QLP TV+S
Sbjct: 1567 ATLSGSGHEMFKNLSVDFETVIIDEAAQCVELSALIPLKYGCTKCILVGDPKQLPPTVLS 1626
Query: 527 PVAEHLGYGTSLFKRLQRAGYP--VKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDY 584
A GY SLF R+QR +P + ML TQYRMHPE+ FPS+EFY+ L DG ++
Sbjct: 1627 QSAARFGYDQSLFVRMQR-NHPEYIHMLDTQYRMHPEISYFPSQEFYEAKLVDGPNMAGL 1685
Query: 585 TTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKS-S 643
+ WH GP+ FFD+ +E G S +N+ E+ + ++ + + + + + +
Sbjct: 1686 RRQAWHASPLLGPYRFFDVQGTQERGRKGQ-SLVNLAELKVAMQIYSRFRTDFGRDGNIA 1744
Query: 644 SQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKS 703
++ II+PY+ Q+ + + RF +G + ++ T D QGRE ++ IFSCVRAS S
Sbjct: 1745 GKIGIITPYKAQLFELRNRFAMEYGDQITNDIEFNTTDAFQGRECEIIIFSCVRASPTDS 1804
>gi|330040413|ref|XP_003239900.1| component of a tRNA splicing complex, sen1 [Cryptomonas paramecium]
gi|327206826|gb|AEA39002.1| component of a tRNA splicing complex, sen1 [Cryptomonas paramecium]
Length = 680
Score = 244 bits (622), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 176/574 (30%), Positives = 279/574 (48%), Gaps = 81/574 (14%)
Query: 198 LFSLKICSLSTIAREYLALRSVGSLPFK--DLILSASEKSSGSQDQSWKIPGLLHEY-IK 254
LFS S+ + EY + + +LPFK ++ +E + + + L+H+Y +K
Sbjct: 130 LFSSFNFSVYSHLNEYNFIYFLDTLPFKFKHVVFFCTEIQQKLK-KIYTRNNLVHKYHLK 188
Query: 255 ENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLREIK 314
++ N SQ+ +I +L K +LIQGPPGTGKT+TI G++S +++ + K +
Sbjct: 189 KHFNQSQMSSI-TSVLEKDIILIQGPPGTGKTRTISGIISLVINQMNFIFYEKK--LHMN 245
Query: 315 RGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNSSRRYRV 374
++P+ +K
Sbjct: 246 NFFQIPLKQK-------------------------------------------------N 256
Query: 375 RVLVCAPSNSALDEIVLR-LLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLV--E 431
+V++ A +N+A DE V R + NI KI+R+G H V+ V+ D+LV
Sbjct: 257 KVIISAIANTATDENVFRSFMGFCFHRINIIFNLYKIIRVGPNYHFLVDHVSFDNLVFVY 316
Query: 432 QKRDDSAAD--KQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVII 489
DS K K + + + +L + C SF K + F+++++
Sbjct: 317 ASEYDSCIKFWKNKEVIKKSQKKLFKKGLLFYTTVACINHSFF------KKKYFFEILVL 370
Query: 490 DEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPV 549
DEAAQA+E L+ + K++ +VGD QLPA V S + GY SLFKRLQ Y +
Sbjct: 371 DEAAQAIEINNLMCVKNISKKLVMVGDVQQLPAFVFSKHSAFFGYDVSLFKRLQLQKYAI 430
Query: 550 KMLKTQYRMHPEVRSFPSREFYDEALEDG--SDVEDYTTRDWHEYRCFGPFSFFDIHEGK 607
L+ QYRMHP++ SFP+R+FY ++D SD E + + RCF PF+FFD+ +
Sbjct: 431 CFLEIQYRMHPQISSFPARKFYKNGIKDSVLSDSE-----NLYFLRCFSPFNFFDVSDSL 485
Query: 608 E-SQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERF-KE 665
E + SW N+DE+ V+ LF +L+ Q ++ IIS Y QV + Q F E
Sbjct: 486 ENAHLKNEFSWCNLDEIR-VINLFIQLLKYTHQKFNAQSFGIISGYEGQVDEIQNYFCNE 544
Query: 666 TFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSIL 725
E + T+D QG+EKD IFSCVR+ K IGFL+D RR+NV TRAK
Sbjct: 545 KISKEKKT----NTIDSFQGKEKDFIIFSCVRSRFKSGIGFLSDCRRINVAFTRAKKYFW 600
Query: 726 VVGCASTLREDKHWNNLVKSAEKQDCLFRVSKPY 759
+G +++L ++ W ++ ++++ F + KP+
Sbjct: 601 CIGNSTSLSKNPTWKEILSDSKRRLKFFLIRKPF 634
>gi|409079006|gb|EKM79368.1| hypothetical protein AGABI1DRAFT_91927 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1901
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 139/333 (41%), Positives = 197/333 (59%), Gaps = 11/333 (3%)
Query: 434 RDDSAADKQKHGATRKD--RDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDE 491
R D D+QK + D R S R IL EA ++CSTLS +G ++ +L+ FD++I+DE
Sbjct: 1459 RMDRLKDEQKSASRTLDALRRSTRQKILLEADVICSTLSGAGHEIIERLD--FDMIIVDE 1516
Query: 492 AAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGY-PVK 550
+AQA+E +TL+PL C++ LVGDP QLP TV+S A Y SLF R+QR+ V
Sbjct: 1517 SAQAIELSTLIPLKYSCQRCILVGDPQQLPPTVLSQEASKYRYNQSLFVRMQRSQPDAVH 1576
Query: 551 MLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQ 610
+L QYRMHPE+ PS FY L DG + + T + WH+ FG + FF++ +G E
Sbjct: 1577 LLSIQYRMHPEISQLPSSVFYQGRLNDGPSMAEKTAQPWHKNAHFGIYKFFNVSKGLEEM 1636
Query: 611 PAGSGSWINIDEVDFVLLLFHKLISMYPQLKS--SSQLAIISPYRHQVKQFQERFKETFG 668
S N+ E + LF++L Y Q S ++ I+S YR Q+ + + +F++ FG
Sbjct: 1637 --SRHSIKNLAECHVAVALFNRLRREYGQDMSDIDYRVGIVSMYRAQIAELKRQFEQRFG 1694
Query: 669 VESQKVVDITTVDGCQGREKDVAIFSCVRASDK-KSIGFLADYRRMNVGITRAKSSILVV 727
E VD TVDG QG+EKD+ I SCVRA +++GFL+D RRMNV +TRAKSS+ ++
Sbjct: 1695 KEILSRVDFNTVDGFQGQEKDIIILSCVRAGPGLQTVGFLSDVRRMNVALTRAKSSLYIL 1754
Query: 728 GCASTL-REDKHWNNLVKSAEKQDCLFRVSKPY 759
G A+TL R D +W +V A + L Y
Sbjct: 1755 GNAATLERSDPNWRKIVGDARGRSRLVEADHTY 1787
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 114/413 (27%), Positives = 174/413 (42%), Gaps = 93/413 (22%)
Query: 51 LREVKDTYKDVDDYLATFEPLLFEEVKAQIIQKKDE-EEVQEWKLRLVMECGEADGFHLP 109
L + D + D++ Y FEPLL E AQI+Q K E +E E K + AD +
Sbjct: 1093 LDPIPDIFMDLNHYRRVFEPLLMLECWAQIVQAKYEPQETLECK---ITSKQYADEWLEL 1149
Query: 110 SVTYEADEVESI---SPNDLLLLSKEEFKEGSTFPTTYAFALVEHCQANLLRLRMYLAGE 166
+ YE++ + D++LL +G T + + QA+L R YL
Sbjct: 1150 DIVYESNVRKDYYLSQETDVVLLRNPHTNDGVMAKTKSFTSNYQGVQASL---RCYL--- 1203
Query: 167 VIHINKDAVKSQRLLNIHSLITSSVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKD 226
KD + L S S K+ SLST+ REY AL+S+ F +
Sbjct: 1204 -----KDGARDPGLQISTSWRIS------------KVFSLSTLHREYAALQSLPYYDFVN 1246
Query: 227 LILSASEKSSGSQDQSWKIPGLLHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKT 286
IL ++ ++ +I + ++ N N Q A+ + + F LIQGPPGTGKT
Sbjct: 1247 TILRPRLQNVELSNKQ-EIRKTMSDF---NINEPQAIAVLKSMATNGFSLIQGPPGTGKT 1302
Query: 287 QTILGLLSAILHATPARVHSKGGLREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMP 346
TI GL+S L + P +P+ +G P +
Sbjct: 1303 STICGLVSLALSK--------------RNRPAVPIQ-------------IGKGPTE---- 1331
Query: 347 IDGDDGFFPTTGNELKPEVVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSY 406
+P + +VL+CAPSN+A+DEI R+ + G R R
Sbjct: 1332 ---------------RPPL--------PKVLLCAPSNAAIDEIARRIKD-GYRGPEKRGE 1367
Query: 407 TPKIVRIGLK--AHHSVNSVAIDHLVEQKRD--DSAADKQKHGATRKDRDSIR 455
K+VRIG + + SV V++DHLV+ + D +S + RK+ + IR
Sbjct: 1368 AIKVVRIGTEQSMNSSVKDVSLDHLVDLEIDPPNSGDSSGEIITIRKELEGIR 1420
>gi|328873818|gb|EGG22184.1| putative splicing endonuclease [Dictyostelium fasciculatum]
Length = 1947
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 130/299 (43%), Positives = 180/299 (60%), Gaps = 6/299 (2%)
Query: 450 DRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCK 509
++ S+ S +LN A I+ STLS SG LS FDVVIIDEAAQAVE +TL+PL K
Sbjct: 1582 EKRSMLSNMLNRASIILSTLSGSGYESLSAAVKQFDVVIIDEAAQAVELSTLIPLKHNVK 1641
Query: 510 QVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSRE 569
+ LVGDP QLPATVIS + + Y SLF+RL + G P+++L QYRMHP + FPS+
Sbjct: 1642 KCILVGDPNQLPATVISRITTNFQYEQSLFQRLSQCGIPMQVLNVQYRMHPTISRFPSKH 1701
Query: 570 FYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLL 629
FY ++DG +V + + R FGPF F+DI + E S S N+ E L+
Sbjct: 1702 FYHGQIKDGHNVIALNHNIYKDAR-FGPFIFYDITDSVEDSNQSSHSLRNVHEAKLANLI 1760
Query: 630 FHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKD 689
+L+ + + + +I+PY+ Q + R +V++ TVDG QGREKD
Sbjct: 1761 ISQLLVHFSKDCEKLSIGVITPYKQQQIELSRRLSHF-----NSMVEVNTVDGFQGREKD 1815
Query: 690 VAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEK 748
+ IFSCVRA SIGFL+D RRMNVG+TRAK S++V+G + L + W L+K +++
Sbjct: 1816 IIIFSCVRAHKGGSIGFLSDVRRMNVGLTRAKLSMIVIGHTNLLMLNSDWGELIKFSKQ 1874
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/299 (31%), Positives = 149/299 (49%), Gaps = 36/299 (12%)
Query: 19 KIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKA 78
KIIL WD L N+ ++K GLR + T++++ +Y+ FEPLL +E K
Sbjct: 1152 KIILSWDPANL-------NENDTK-------GLRSIPTTFENLSEYIEIFEPLLLQEYKG 1197
Query: 79 QIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADEV-ESISPNDLLLLSKEEF--- 134
Q+I+ +E + +KL V + + FH+ ++ ++ + +DL+++SK +F
Sbjct: 1198 QLIKSMEEMDNVCYKLT-VEDVARENDFHVCDYFFDHNQSSDEFFIDDLVIISKPQFGGS 1256
Query: 135 -KEGSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSA 193
+ + + + +++R + + +A S L I L S
Sbjct: 1257 KFGKIEKKEKKERKEMNNIKCSWIKVRFFFENAT---SSNANPSTTL--IGQLKIGSQWK 1311
Query: 194 VEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWK----IPGLL 249
+ K + SLST+ REY+AL +VG +P I+S S S ++ IP L
Sbjct: 1312 MTK------LTSLSTVNREYMALHTVGKIPLGASIISPSLSLSSYSLENASSRVTIPKKL 1365
Query: 250 HEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHA-TPARVHSK 307
+KE+ N SQ+EAIH L F L+QGPPGTGKT+TI+ LLS +LH TP + SK
Sbjct: 1366 ESALKESLNDSQIEAIHASLTPSGFTLLQGPPGTGKTKTIIALLSVLLHTMTPIKDDSK 1424
Score = 47.4 bits (111), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 56/98 (57%), Gaps = 13/98 (13%)
Query: 374 VRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKA--HHSVNSVAIDHLVE 431
+++LV APSN+A+DEI R+L+ + +++ Y P +RIG K + +V+ +++D+L+
Sbjct: 1431 IKILVTAPSNAAVDEIATRILDQRMLNQDGLPYQPFCIRIGNKQQINSTVSKISLDNLLS 1490
Query: 432 ---QKRDDSAADKQKHGA--------TRKDRDSIRSAI 458
QK D+ + Q+ A TR + D + + I
Sbjct: 1491 EELQKDDNKVSQIQQRVASLHEESEKTRSELDEVHNRI 1528
>gi|299115307|emb|CBN74123.1| SEN1 protein [Ectocarpus siliculosus]
Length = 1430
Score = 243 bits (620), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 156/456 (34%), Positives = 229/456 (50%), Gaps = 81/456 (17%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGI------------------RDENIRSYTPKIVRIGLK 416
R+L+ APSN+A+DE+VLRL G+ R + RS T
Sbjct: 622 RILIVAPSNAAVDELVLRLCQEGVPGVDGRVRFPRVVRVGGPRADGERSGTVDGRGGSGG 681
Query: 417 ----AHHSVNSVAIDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFS 472
V V+++ LV ++ + T+ S R IL A +VC+TLS S
Sbjct: 682 RDGVTSTMVEGVSLERLVTERMER----------TKCSAVSARLGILLRAEVVCATLSGS 731
Query: 473 GSALL------------SKLNH-------------------GFDVVIIDEAAQAVEPATL 501
GS +L +KL+ GFD V++DEAAQAVEP+++
Sbjct: 732 GSHILVETVMMSMQLAATKLSKTKKGQKKAKAAGREGQTILGFDAVVMDEAAQAVEPSSM 791
Query: 502 VPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPE 561
+PL + V +VGDP QLPAT+ S A+ Y SLF RLQR G+P ML TQYRMHP+
Sbjct: 792 IPLKYNPRAVIMVGDPAQLPATIFSKDAQRANYAQSLFLRLQRGGHPKTMLDTQYRMHPD 851
Query: 562 VRSFPSREFYDEALEDGSDVEDYT-TRDWHEYRCFGPFSFFDIHEGKESQP----AGSGS 616
+ SF S FY L V + + + +H F P+ F ++ G+ + G+ S
Sbjct: 852 IASFASTRFYSGLLRSAPTVTEASHGQVFHRLPRFAPYLFHNVSGGRLKRGGEGYGGAKS 911
Query: 617 WINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVD 676
N EV ++ L LI+ +P + ++ +I+PYR+Q++ Q T G+ V+
Sbjct: 912 LSNPTEVSYITSLLQDLITTFPGTDFNGRIGVIAPYRNQIRALQRGMWST-GLR-HDGVE 969
Query: 677 ITTVDGCQGREKDVAIFSCVRASD-----------KKSIGFLADYRRMNVGITRAKSSIL 725
++TVDG QGREKD+ IFSCVRA + IGFL D+RR+NV ITRAK ++
Sbjct: 970 VSTVDGFQGREKDIMIFSCVRAPELQRSGDSGSSSGGGIGFLDDWRRLNVAITRAKFAMW 1029
Query: 726 VVGCASTLREDKHWNNLVKSAEKQDCLFRVSKPYAS 761
+VG A L++ W L+ ++K++ S P A+
Sbjct: 1030 IVGHAGVLKQSTDWRELINDSKKRNAFIDSSNPGAT 1065
Score = 43.5 bits (101), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 32/45 (71%), Gaps = 2/45 (4%)
Query: 255 ENHNASQLEAIHEGL--LRKAFVLIQGPPGTGKTQTILGLLSAIL 297
+ N+SQ++A+ + + F L+QGPPGTGKT+TI+G++ +L
Sbjct: 516 QKFNSSQVQAMRKVVDGSPSGFTLLQGPPGTGKTRTIMGIVGVLL 560
>gi|281211277|gb|EFA85442.1| adenylyl cyclase [Polysphondylium pallidum PN500]
Length = 1439
Score = 243 bits (619), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 148/378 (39%), Positives = 220/378 (58%), Gaps = 33/378 (8%)
Query: 365 VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIG-LKA-HHSVN 422
+ N+ ++LVCAPSN A+DE+ LR+L G+ D + P I RIG L+A + +++
Sbjct: 544 IFNAILPMTAKILVCAPSNVAVDEVGLRVLKDGLLDNSGGRTDPSIARIGRLEAINENIH 603
Query: 423 SVAIDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNH 482
+ + L D +K ++ + I+ STLS SGS +L++
Sbjct: 604 QICVSKL-------QTPDSKK-------------IMIKRSRIILSTLSGSGSMILAQPEF 643
Query: 483 GFDVVIIDEAAQAVEPATLVPLATG-CKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKR 541
VVI+DE+ Q+ EP+TL+PL +V L+GDP QLP TV S ++ Y SLF+R
Sbjct: 644 YPSVVIVDESTQSCEPSTLIPLLRNPYSKVILIGDPKQLPPTVFSTISSRFNYDVSLFER 703
Query: 542 LQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFF 601
L + +PV ML TQYRMHP++ FPS +FY L+DG +V Y + + + +GP +F+
Sbjct: 704 LAKY-FPVHMLDTQYRMHPKISKFPSNQFYSAKLKDGENVVKYNNSFYTDPK-YGPINFY 761
Query: 602 DIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQE 661
I + +E + G S N E+ V L KL+ +P++KS S + II+PY+ Q K+ Q+
Sbjct: 762 HIPDSQELKTIGK-SIKNSLEIRLVFTLLKKLVQDHPEVKSMS-VGIITPYKLQKKELQD 819
Query: 662 RFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAK 721
K F E VV + TVDG QG EKD+ IFSCVR+ + IGFL D RR+NVGITRA+
Sbjct: 820 A-KSHFN-EKMDVV-VNTVDGFQGAEKDIIIFSCVRS---EKIGFLKDTRRINVGITRAR 873
Query: 722 SSILVVGCASTLREDKHW 739
++ +VG + L +D +W
Sbjct: 874 RALYIVGSSKLLEQDPNW 891
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 48/86 (55%), Gaps = 11/86 (12%)
Query: 242 SWKIPGLLHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLL-------- 293
++++PGL+ ++ N SQ AI E L + LIQGPPGTGKT+TI+ LL
Sbjct: 491 AYQMPGLVGTILRNQLNQSQFNAISESLASRHVSLIQGPPGTGKTKTIISLLAIFNAILP 550
Query: 294 --SAILHATPARVH-SKGGLREIKRG 316
+ IL P+ V + GLR +K G
Sbjct: 551 MTAKILVCAPSNVAVDEVGLRVLKDG 576
>gi|334311942|ref|XP_001370697.2| PREDICTED: probable helicase senataxin [Monodelphis domestica]
Length = 2675
Score = 241 bits (615), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 240/845 (28%), Positives = 361/845 (42%), Gaps = 190/845 (22%)
Query: 13 SIF-RFCKIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPL 71
SIF F K IL W Y V D+ + + L+ V T+++ +DYL F PL
Sbjct: 1682 SIFDSFIKEILKWKYEMFVN-----FDQFGPPANLCQAILKPVPVTFQNSEDYLNVFFPL 1736
Query: 72 L----FEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADEVESISP--ND 125
L FE V + I + E LR G+ + E D + + P ND
Sbjct: 1737 LILNTFETVAQEWIDNPKKGNTYELHLR-SFSAGDINCGQFVVCLQECDMAKQLHPKEND 1795
Query: 126 LLLL------SKEEFKEGSTFP--TTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKS 177
L+ L K++ E S Y V + + +R G + ++++
Sbjct: 1796 LVFLIPKKLNGKKKVIEESEMKDQQVYHCGYVSQFRRSSVRHNAQFEGCL------SIQT 1849
Query: 178 QRLLNIHSLITSSVSAVEKRLFSLKICSLSTIAREYLALRSVGS---LPFKDLILSASEK 234
Q L+ H I S+ + I SL T R+ AL +G +P IL+ S
Sbjct: 1850 QSNLSFH--INESIDCI-------VISSLVTTQRKLKALSLLGRNTVVPLARAILNPSTS 1900
Query: 235 SSGSQDQSWKIPGLLHEYIKENHNASQLEAIH-------EGLLRKAFVLIQGPPGTGKTQ 287
+D P + Y+K+ +N Q +AI + L LI GPPGTGK++
Sbjct: 1901 DFCPRDSLNTAPERILTYLKD-YNEDQKKAIEVAYAMVKQPPLIAKICLIHGPPGTGKSK 1959
Query: 288 TILGLLSAILHATPARVHSKGGLREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPI 347
TI+GLL IL P KRG
Sbjct: 1960 TIVGLLYRILTEKP------------KRG------------------------------- 1976
Query: 348 DGDDGFFPTTGNELKPEVVNSSRRYRVRVLVCAPSNSALDEIVLRLL------------- 394
D D+ +++ R RVLVCAPSN+A+DE++ +++
Sbjct: 1977 DSDENL--------------NAKIKRNRVLVCAPSNAAVDELMKKIILEFKEKCQDKKNP 2022
Query: 395 --NTG----IRDENIRSYTPKIVRIGL--KAHHSVNS-----------------VAIDHL 429
N G +R +S ++++ L + +H + V +D L
Sbjct: 2023 LGNCGDINLVRLGPEKSINNEVLKFSLDSQVNHRMKKDLPSHIQEMHERKEHLDVKLDKL 2082
Query: 430 VEQKRDDSAADKQKH-------GATRKDRDSI--------------RSAILNEAVIVCST 468
Q+ D QK K+R + +S+I+ E+ I+C T
Sbjct: 2083 SRQRALDRCEKGQKRSNLDEEIARISKERQQLASKLKEVRGRPQETQSSIILESHIICCT 2142
Query: 469 LSFSGSALLSKL--NHG---FDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPAT 523
LS SG LL G F VI+DEA Q+ E TL P C ++ LVGDP QLP T
Sbjct: 2143 LSTSGGLLLESAFRRQGCVPFSCVIVDEAGQSCEIETLTPFIHRCNKLILVGDPKQLPPT 2202
Query: 524 VISPVAEHLGYGTSLFKRLQR-----------AGYPVKMLKTQYRMHPEVRSFPSREFYD 572
VIS A+ GY S+ RL + + PV L QYRMHP++ FPS Y+
Sbjct: 2203 VISVKAQEYGYDQSMMARLYKHLEEQVKQNVISRSPVLQLTVQYRMHPDICLFPSSYIYN 2262
Query: 573 EALEDGSDVED-YTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFH 631
L+ E+ T DW F P+ FD+ +G E + + S++N+ E+ V+ L
Sbjct: 2263 RTLKTNRLTEESRCTSDWP----FQPYLVFDVGDGSERR--ENDSYVNVQEIKLVMELI- 2315
Query: 632 KLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVA 691
KLI + + + II+ Y+ Q Q+ + F E + ++ TVD QGR+KD
Sbjct: 2316 KLIKDRRKDITMRNIGIITHYKAQKMMIQQELDKEF--ERNRPGEVDTVDAFQGRQKDCV 2373
Query: 692 IFSCVRA-SDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQD 750
I +CVRA + + SIGFLA +R+NV ITRAK S+ ++G TL E++HWN+L++ A+K+
Sbjct: 2374 IVTCVRANASQGSIGFLASLQRLNVTITRAKYSLFILGHLRTLMENQHWNHLIQDAQKRG 2433
Query: 751 CLFRV 755
+ R
Sbjct: 2434 AIIRT 2438
>gi|66827407|ref|XP_647058.1| hypothetical protein DDB_G0268914 [Dictyostelium discoideum AX4]
gi|60475110|gb|EAL73046.1| hypothetical protein DDB_G0268914 [Dictyostelium discoideum AX4]
Length = 4540
Score = 241 bits (614), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 155/424 (36%), Positives = 233/424 (54%), Gaps = 43/424 (10%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQKR 434
++LVC PS++A+DE+ R++ G+ ++ Y P +VRIGLK + + + D V +R
Sbjct: 3603 KILVCGPSHAAVDEVAKRVIIKGLLNDRGEKYIPTMVRIGLKDNIQ-DPIVHDICVFNRR 3661
Query: 435 DDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQ 494
D + IL + I STLS SGS L+ + +VVI+DEA Q
Sbjct: 3662 LDE-----------------KKMILEHSSICFSTLSASGSNLVQS-SFKPNVVIVDEATQ 3703
Query: 495 AVEPATLVPLATGCK---QVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKM 551
+ E + ++PL+ G K ++ LVGDPVQLP T+ S + H G G SLF+RL + PV M
Sbjct: 3704 SCETSCIIPLSLGAKSMKKLILVGDPVQLPPTIFSKESIHCGLGISLFERLSKV-LPVSM 3762
Query: 552 LKTQYRMHPEVRSFPSREFYDEALEDGSDV---EDYTTRDWHEYRCFGPFSFFDIHEGKE 608
L QYRMHP + FPS +FY + L+DG +V + Y+ R +HE + +G FFD+ + +E
Sbjct: 3763 LNVQYRMHPLISKFPSSQFYHDILKDGDNVVSSDAYSLR-FHENQDYGAIRFFDVTDSRE 3821
Query: 609 SQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFG 668
+ G S N E+ V L KL +P+ K S I++PY+ Q K+ ++ +K+
Sbjct: 3822 ER--GKTSIKNQLEITMVFTLIKKLTQDHPETKQYS-FGIVTPYKLQRKEIEDAYKQ--- 3875
Query: 669 VESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVG 728
+ ++I T+D QG EKD+ I SCVR +SIGFL+D RR+NV ITRAK + ++G
Sbjct: 3876 LNLSLNIEIKTIDSFQGSEKDIMIMSCVR---NESIGFLSDRRRINVSITRAKYGLFIIG 3932
Query: 729 CASTLREDKHWNNLVKSAEKQDCLFRVSKPYASFFSD-ENLESMRKNATTDNVQGADGHV 787
A+ L+ D+ W L+ D L + + Y+ +D ENL N QG
Sbjct: 3933 NATLLKLDRTWGELI------DHLISIDRVYSINSNDIENLREQTIQFDLINPQGLITDF 3986
Query: 788 PHDD 791
+DD
Sbjct: 3987 GNDD 3990
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/121 (40%), Positives = 65/121 (53%), Gaps = 6/121 (4%)
Query: 182 NIHSLITSSVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSAS-EKSSGSQD 240
N H +I ++ L L++ S T RE AL +V P LIL + E + S
Sbjct: 3485 NCHGVINTNTP-----LSFLRVSSCVTFHRELDALETVAKSPLFPLILKPTIEAYNQSGK 3539
Query: 241 QSWKIPGLLHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHAT 300
W+IP LL ++ + N SQL AI+E L+ + LIQGPPGTGKT TI L+S IL
Sbjct: 3540 DRWEIPTLLKDHYNQTLNESQLAAINESLVHSSITLIQGPPGTGKTHTITSLISIILAIN 3599
Query: 301 P 301
P
Sbjct: 3600 P 3600
>gi|162606520|ref|XP_001713290.1| hypothetical protein GTHECHR2082 [Guillardia theta]
gi|12580756|emb|CAC27074.1| sen1 [Guillardia theta]
Length = 692
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 139/390 (35%), Positives = 223/390 (57%), Gaps = 17/390 (4%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGI---RDENIRSYTPKIVRIGLKAHHSVNSVAIDHLVE 431
+V++CAPSN+A+DE + R+L GI N+ + P+++R+G + ++ ++ + L
Sbjct: 276 QVIICAPSNAAIDENLSRML-FGIPYLYQNNLNN--PRLLRLGPNYNKYLDHISFETLSL 332
Query: 432 QKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDE 491
K D + K + + +++ +I+N ++ +TL+ S L++ L +IIDE
Sbjct: 333 IKLSDIDFE-NKFKFSNFNIINLKRSIINTGSLIFTTLACSNYHLINNLTSK-QYLIIDE 390
Query: 492 AAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKM 551
AAQ++E ++L+P+ ++ LVGD QLPATV S A GY SL KR Q YP
Sbjct: 391 AAQSIELSSLIPIKKYTHRIILVGDIHQLPATVFSKSAIAFGYNRSLLKRFQLNRYPTLF 450
Query: 552 LKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQP 611
L QYRMHP++ SFP+R+FY L+D V + ++H+ RCF P FFDI +G E+
Sbjct: 451 LGIQYRMHPQISSFPARKFYKNNLKDSWKVSKIS--NFHQLRCFSPLIFFDIIDGVENYH 508
Query: 612 AGS-GSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKET-FGV 669
+ SW N+DE+ F+ L F +I + L + + IS Y Q+++ ++ + +
Sbjct: 509 TDNHFSWCNLDEIRFINLYFRSIICLISNLNELT-IGFISGYSGQIEEMRDILSNSKIKL 567
Query: 670 ESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGC 729
Q I+T+D QG+EKD+ FSCVR+ ++ IGFLAD RR+NV TRAK + G
Sbjct: 568 NEQ----ISTIDSFQGKEKDILFFSCVRSKIERGIGFLADGRRINVAFTRAKLGFWIFGN 623
Query: 730 ASTLREDKHWNNLVKSAEKQDCLFRVSKPY 759
+ +LR+D +WN V + ++ F KPY
Sbjct: 624 SFSLRKDSNWNETVFDFKIRNNYFVSRKPY 653
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 61/287 (21%), Positives = 118/287 (41%), Gaps = 50/287 (17%)
Query: 21 ILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKAQI 80
ILGW++F K + L V + + FEPL FEE++ QI
Sbjct: 8 ILGWNFF-------------YSKTNEFLYRLFFVPIVFATFFHFKYCFEPLYFEELRYQI 54
Query: 81 IQKKDEEEVQEWKLRLVMECGEADG----FHLPSVTYEADEVESISPNDLLLLSKEEFKE 136
+ E V + K+ ++ + + T D+V++ N +L K +
Sbjct: 55 NKNIKENFVTDLKIDGIIRSTKIKFDKLFVKIKIKTKSIDKVKNTIGNFFILTIKND--- 111
Query: 137 GSTFPTTYAFALVEHCQANLLRLRMYLA--GEVIHINKDAVKSQRLLNIHSLITSSVSAV 194
N++ + + G+V++I K K ++ I+ + ++
Sbjct: 112 ------------------NIIAKKHFFTFFGKVVNIKK---KKLIIMEINPIFFLRINKK 150
Query: 195 EKRLFSLK--ICSLSTIAREYLALRSVGSL--PFKDLILSASEKSSGSQDQSWKIPGLLH 250
+K + L +S + +E+ +R L P + ++++ +S ++ + +
Sbjct: 151 DKIILFLSRYFSKISLVLKEFETIRKFNYLYNPIRTILMNPVNESIILRNSFF--DECID 208
Query: 251 EYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAIL 297
+ + N +QL I + LIQGPPGTGKT+TILG+L+ +
Sbjct: 209 RHYNLHFNKNQLSCIKD-FQNNHITLIQGPPGTGKTRTILGILAILF 254
>gi|399949986|gb|AFP65642.1| component of a tRNA splicing complex, sen1 [Chroomonas
mesostigmatica CCMP1168]
Length = 753
Score = 239 bits (610), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 143/389 (36%), Positives = 225/389 (57%), Gaps = 14/389 (3%)
Query: 375 RVLVCAPSNSALDEIVLRL-LNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQK 433
R++VCA SN+A DE +R+ L I + ++T I+R+G ++ + +D+
Sbjct: 334 RIIVCAFSNAATDENTIRITLGLPIYEFFKPNHTFSILRLGPNYKIFLDHITLDNYALIW 393
Query: 434 RDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAA 493
++ DK ++ + S R+ +L + I+ +TL+ + + K+ +++IIDEAA
Sbjct: 394 ASENDPDKTLWNKSKILQKS-RTIVLKNSFIIYTTLACASYSFFEKIKKK-EMIIIDEAA 451
Query: 494 QAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLK 553
QA+E +TL P+ CK++ LVGD QLPATV S + + Y SLFKRLQ +P+ L+
Sbjct: 452 QAIELSTLSPIRNTCKKLILVGDIQQLPATVFSQTSLNFDYDRSLFKRLQIKKFPIWFLE 511
Query: 554 TQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKES-QPA 612
TQYRMHP++ SF +R+FY L+D +V +++ R FGP FFD+ EG +
Sbjct: 512 TQYRMHPQISSFIARKFYKNGLKDSENVS--LLKNFQFLRGFGPLIFFDVCEGNDRFHLK 569
Query: 613 GSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQ 672
SW N+DE+ V + +I ++ L S + II+ Y+ Q+ +FQ+ FG+ Q
Sbjct: 570 QKNSWCNLDEIRLVSFIIRGIICIFSNL-SWRSIGIIASYQGQIGEFQD-----FGIMKQ 623
Query: 673 KVV--DITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCA 730
I +VDG QGREK++ FS VRA ++ +GFL+D RR+NV TRAKS VG
Sbjct: 624 SEFKGQINSVDGFQGREKEIVFFSSVRAKLERGVGFLSDCRRINVAFTRAKSCFWAVGNF 683
Query: 731 STLREDKHWNNLVKSAEKQDCLFRVSKPY 759
STL++D++W + A K+ LF + KP+
Sbjct: 684 STLQKDQNWAEAILDARKRGRLFDIRKPF 712
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
Query: 208 TIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIKENHNASQLEAIHE 267
+ +E+ +L+ + +P K + + K++ ++ + ++K + N SQ+ ++
Sbjct: 173 SFFKEFFSLKLIRKIPDKIGKILFNPKNNFIENYYFDFHVTNRIHLKSHFNKSQINSMF- 231
Query: 268 GLLRKAFVLIQGPPGTGKTQTILGLLSAILH 298
+ LIQGPPGTGKT+TILG++S ++H
Sbjct: 232 SVFDSKITLIQGPPGTGKTRTILGIISLVIH 262
>gi|320166766|gb|EFW43665.1| MAA3 [Capsaspora owczarzaki ATCC 30864]
Length = 2435
Score = 239 bits (610), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 183/557 (32%), Positives = 266/557 (47%), Gaps = 134/557 (24%)
Query: 252 YIKENH--NASQLEAIHEGL-LRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKG 308
Y+K N N SQ EA+ + L QGPPGTGKT+TIL LL A++
Sbjct: 1522 YLKTNKELNDSQFEAVKLAMSLSHGLCFWQGPPGTGKTKTILALLGAVV----------- 1570
Query: 309 GLREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNS 368
R +I D P NE PE+
Sbjct: 1571 --------------------------------RKSI--TDAQHRLVP---NEKSPELTR- 1592
Query: 369 SRRYRVRVLVCAPSNSALDEIVLR----LLNTGIRD-----------------ENIRSYT 407
R R+LVCAPSN+A+DEI+ R LL+ G D + Y
Sbjct: 1593 ----RKRILVCAPSNTAVDEIISRCEAELLSVGDLDLSKLPIGFDPSQIVTITQGQHRYR 1648
Query: 408 PKIVRIGLKAHHSVNSVAIDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCS 467
P +VR G H +++ + ++ + A + +DR+++++ I A I+
Sbjct: 1649 PVVVRFGQSDH----PTSLERRLAKRIGNDA-------ISVRDRNALKTEIFMSADIIAC 1697
Query: 468 TLSFSGSALLSK-------------LNHG----------FDVVIIDEAAQAVEPATLVPL 504
TL SG LS + G FD++IIDEA+Q +E +L+P
Sbjct: 1698 TLVSSGLETLSTQVAESTQRLKEQLASRGGGSIVTNQPFFDMLIIDEASQCIELESLIPF 1757
Query: 505 ATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQR----------AGYPVKMLKT 554
T + LVGDP+QLPATV S A G SLF+R+ + A P+++L T
Sbjct: 1758 RTRPRVAVLVGDPMQLPATVTSMEARQSGLSRSLFERVAQAVTSAPDRAAADSPIRLLST 1817
Query: 555 QYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGS 614
QYRM P++ FP+REFY+ L + +D+ HE F PF F+++HEGKE Q
Sbjct: 1818 QYRMAPQIAKFPNREFYEGRLTNFYP-DDHFRLPCHEQLQFRPFVFYNVHEGKEKQ---D 1873
Query: 615 GSWINIDEVDFVLLLFHKLISMYPQLKSSSQ---LAIISPYRHQVKQFQERFKETFGVES 671
S IN +EVD V + KL + YP++ +Q + ++SPY QV +++ +
Sbjct: 1874 KSKINWEEVDTVSRVLQKLHTKYPEMFEGTQPVSIGVLSPYSDQVGLIRKKIDQKLP-HM 1932
Query: 672 QKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCAS 731
QK +++ TVD QGREKD+ +FSCV +D+ IGFLAD RRMNV +TRA+ + V+G A
Sbjct: 1933 QKFIEVDTVDAFQGREKDIVLFSCV-FTDR--IGFLADTRRMNVALTRARKCLFVIGRAE 1989
Query: 732 TLRE--DKHWNNLVKSA 746
+L + W +LV+ A
Sbjct: 1990 SLMNGSEPSWRHLVRYA 2006
>gi|281211278|gb|EFA85443.1| Regulator of nonsense transcripts-like protein [Polysphondylium
pallidum PN500]
Length = 1412
Score = 239 bits (609), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 147/368 (39%), Positives = 217/368 (58%), Gaps = 33/368 (8%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQKR 434
++LVCAPSN A+DE+ LR+L G+ D + P I RIG AI+ + Q
Sbjct: 557 QILVCAPSNVAVDEVGLRVLKDGLLDNSGGRTDPSIARIGRLE-------AINENIHQ-- 607
Query: 435 DDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGF--DVVIIDEA 492
++ R S + ++ + I+ STLS +GS L+ ++ GF VVI+DE+
Sbjct: 608 ---------ICVSKHRRASYKKKMIQSSRIILSTLSGAGSQLI--IHSGFRPSVVIVDES 656
Query: 493 AQAVEPATLVPLATGCK-QVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKM 551
Q+ E +TL+PL ++ L+GDP QLP TV S ++ Y SLF+RL + +PV M
Sbjct: 657 TQSCESSTLIPLLRNPNSKIILIGDPKQLPPTVFSGISSRFNYDVSLFERLAKY-FPVHM 715
Query: 552 LKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQP 611
L TQYRMHP++ FPS +FY+ L+DG +V Y + + + +GP +F+ I + +E +
Sbjct: 716 LDTQYRMHPKISKFPSLQFYNSKLKDGENVAKYHNSFYTDPK-YGPINFYHIPDSQELKT 774
Query: 612 AGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVES 671
G+ S +N E+ V L KL+ +P++KS S + II+PY+ Q K Q+ K F E
Sbjct: 775 IGN-SIMNDLEIRLVFTLLKKLVQDHPEVKSMS-VGIITPYKLQKKVLQDA-KNHFN-EK 830
Query: 672 QKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCAS 731
VV + TVDG QG EKD+ IFSCVR+ + IGFL D RR+NVGITRA+ ++ +VG A
Sbjct: 831 MDVV-VNTVDGFQGAEKDIIIFSCVRS---EKIGFLKDTRRINVGITRARRALYIVGSAK 886
Query: 732 TLREDKHW 739
L +D +W
Sbjct: 887 LLEQDPNW 894
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 123/292 (42%), Gaps = 52/292 (17%)
Query: 59 KDVDDYLATFEPLLFEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADEV 118
+ +++Y+ PL+FEE++AQI ++ E + +VME G + HL + ++
Sbjct: 306 RTLNEYILDIIPLMFEELRAQITKE------LESRGAVVMESGHYNFDHLAKTSCLIGDI 359
Query: 119 ESISPNDLLLLSKEEFKEGSTFPTTYAFALVEHCQAN-----LLRLR-MYLAGEVIHINK 172
+ + EG Y + E+ Q N LLRL + G+VI N
Sbjct: 360 DM----------PKRAGEGVHLYLDYPYTRYEN-QLNIKDMVLLRLPGRSVFGQVIGANL 408
Query: 173 -DAVKSQRLLNIHSLITSS----VSAVEKRLFSLK----------ICSLSTIAREYLALR 217
K QR++ I + S S L+ + + + +T RE A+R
Sbjct: 409 FSKTKEQRVI-IRIMDNQSYAPHTSEFIDALYQTRKDKGKVNLSYVNNFTTFERELNAVR 467
Query: 218 SVGSLPFKDLILSASEKSSGSQDQS--WKIPGLLHEYIKENHNASQLEAIHEGLLRKAFV 275
LIL+ S S + +P ++ + N+SQ AI + L
Sbjct: 468 GFTQHALAPLILAPKLYSIFKTPISPIYVMPTIVGSLLSSQLNSSQFRAISQSLASPQIS 527
Query: 276 LIQGPPGTGKTQTILGLLS----------AILHATPARVH-SKGGLREIKRG 316
LIQGPPGTGKT+TI+ LL+ IL P+ V + GLR +K G
Sbjct: 528 LIQGPPGTGKTKTIISLLAIFNTILKPTEQILVCAPSNVAVDEVGLRVLKDG 579
>gi|301112122|ref|XP_002905140.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262095470|gb|EEY53522.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 1372
Score = 239 bits (609), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 138/359 (38%), Positives = 201/359 (55%), Gaps = 7/359 (1%)
Query: 447 TRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLAT 506
++ R S+ + L+ A IV +TLS +G A L + +DV+++DEAAQAVE +T++P+
Sbjct: 868 SQSTRQSLEVSFLDTAHIVFTTLSSAGVAALDA-SARYDVLVVDEAAQAVELSTIIPMKF 926
Query: 507 GCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFP 566
G KQ LVGDP QL ATV S + Y SLF+RL+ +PV ML+TQYR HP + FP
Sbjct: 927 GSKQCVLVGDPQQLSATVFSRNSGQSLYERSLFERLESCEHPVHMLRTQYRSHPMISDFP 986
Query: 567 SREFYDEALEDGSDVE-DYTTRDWHEY-RCFGPFSFFDIHEGKESQPAGSGSWINIDEVD 624
FY L+DG +V+ D + +H F P F+++ +E + S S +N+ E +
Sbjct: 987 RNYFYGGKLQDGDNVKGDEYAKPYHNLGPAFMPLVFWNLLSSRE-KATKSVSRMNVGEAE 1045
Query: 625 FVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQ 684
+ LF L + P S ++ +I+PY Q+ + + RF+ G ++ V+I TVDG Q
Sbjct: 1046 LAVNLFLTLKNSCPPNAISGKVGMITPYSQQMDELRNRFRHALGERYEQEVEINTVDGFQ 1105
Query: 685 GREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVK 744
GREKD+ I S VRA K +GFL D RRMNV +TRAK + V+G +TLR K W+ L+
Sbjct: 1106 GREKDIIILSTVRADPKAGVGFLNDIRRMNVALTRAKFACYVIGKENTLRSSKPWSALLD 1165
Query: 745 SAEKQDCLFRVSKPYASFFSDENLESMRKNATTDNVQGADGHVPHDDETMHYANTGDAD 803
A C+ V P + + L+ M + + T GA + H HY T AD
Sbjct: 1166 HAYNHHCIVHVESPKCNLLT---LKPMERPSETSRNAGASSNSHHQGPQHHYDQTMRAD 1221
Score = 85.9 bits (211), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 95/401 (23%), Positives = 166/401 (41%), Gaps = 87/401 (21%)
Query: 58 YKDVDDYLATFEPLLFEEVKAQIIQKKDEEEVQEWKLRL--------VMECG---EADGF 106
++ + Y + ++PL EEV+AQ I ++ + + C +
Sbjct: 173 FRSYEHYFSVWKPLALEEVQAQTINAVTTDQPNPIPVTIKGFGATFISKSCKIRVDPKKQ 232
Query: 107 HLPSVTYEA--DEVESISPNDLLLLSKEE--FKEGSTFPTTYAFALVEHCQANLLRLRMY 162
++P + ++ D + + NDL+L++ ++ F++ T + ++M
Sbjct: 233 NIPGMRRKSGWDHLNDVFMNDLVLITTDQDYFRKALT---------------SSKGVKME 277
Query: 163 LAGEVIHINKDA-----VKSQRLLN---IHSLITSSVSAVEKR--LFSLKICSLSTIARE 212
G+ H V +QR +++ S + +EK +F K+ +L T RE
Sbjct: 278 ANGDAAHETSPVGFLAIVATQRASKEGLTMTILRSGLGVLEKEEHVFLFKLNNLITSVRE 337
Query: 213 YLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLH-EYIKENHNASQLEAIHEGLLR 271
+ AL L+LS K Q S GL + +++ N SQ EAI
Sbjct: 338 FRALCDCSHYGLLPLLLSGEHKQGTMQLDSL---GLKYVQWLSRTFNDSQREAITAAATS 394
Query: 272 KAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLREIKRGPELPMHEKYNHWGRA 331
+ F LI+GPPGTGKT T+ GLL+++ R ++ + ++ R P+ + + H G
Sbjct: 395 EGFTLIKGPPGTGKTTTLKGLLNSLHLREYNRYYN--AVLDVARRPDNETAKAWAHVGNE 452
Query: 332 SPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNSSRRYRVRVLVCAPSNSALDEIVL 391
P +LV APSN+A+D IV
Sbjct: 453 KP-----------------------------------------HILVTAPSNAAVDNIVS 471
Query: 392 RLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQ 432
+++ G D R Y PKIVR+G +V SV +++ V+Q
Sbjct: 472 KVIEEGFCDGEGRRYFPKIVRVGRGLSANVQSVGLENQVDQ 512
>gi|299743534|ref|XP_001835836.2| helicase sen1 [Coprinopsis cinerea okayama7#130]
gi|298405699|gb|EAU85901.2| helicase sen1 [Coprinopsis cinerea okayama7#130]
Length = 1960
Score = 236 bits (601), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 129/325 (39%), Positives = 191/325 (58%), Gaps = 10/325 (3%)
Query: 434 RDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAA 493
RD +D + A R+ R I+ +A ++CSTLS SG L L+ F++VIIDEAA
Sbjct: 1482 RDKLKSDGRSMEALRR---KARFEIIRDADVICSTLSGSGHEAL--LDQTFEMVIIDEAA 1536
Query: 494 QAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKR-LQRAGYPVKML 552
QAVE ++L+PL K+ +VGDP QLP TVIS A Y SLF+R +++ V +L
Sbjct: 1537 QAVELSSLIPLKYESKRCIMVGDPQQLPPTVISQQAASKKYDQSLFQRFFKKSPKAVHLL 1596
Query: 553 KTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPA 612
QYRMHPE+ FPS+ FY++ ++DG ++++ T R WH G + F+++ E P
Sbjct: 1597 SIQYRMHPEISRFPSKAFYNDRIQDGPNMKELTARPWHAEPLLGIYKIFNVNGNAEEGP- 1655
Query: 613 GSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQ 672
S N EV+ L+ +L + + + ++ I+SPYR Q+K+ + F + FG
Sbjct: 1656 -QNSLKNRAEVEVATALYRRLSTQFREFGLERKIGIVSPYRAQIKELERSFFQAFGQSVL 1714
Query: 673 KVVDITTVDGCQGREKDVAIFSCVRASDK-KSIGFLADYRRMNVGITRAKSSILVVGCAS 731
+D TVDG QG+EKD+ I SCVR KSIGF+AD RR+NV ITRAKS++ ++G
Sbjct: 1715 DEIDFNTVDGFQGQEKDIIILSCVRGGPGVKSIGFMADVRRLNVAITRAKSALFILGNVP 1774
Query: 732 TL-REDKHWNNLVKSAEKQDCLFRV 755
TL R + W + A +++ + V
Sbjct: 1775 TLERSESIWKQAIADARERNLIVNV 1799
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 120/302 (39%), Gaps = 39/302 (12%)
Query: 19 KIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKA 78
KIIL WDY K S + D L++V + ++D Y FEPLL E A
Sbjct: 1087 KIILSWDY----KHSGPYPPSGNWDPDI----LQQVPEEFRDYAQYHRIFEPLLLLECWA 1138
Query: 79 QIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADEVESISPNDLLLLSKEEFKEGS 138
QI+ K +EV L F + S Y +D ++ +F
Sbjct: 1139 QILGTK--KEVPPSYL-----------FTVASKQYVSDWIDM------------DFSATD 1173
Query: 139 TFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSAVEKRL 198
P + + V+ + G+ + K + + + + +T +
Sbjct: 1174 PIPNDWDLSDVDIVLLESPDGEKTVMGKAVTFRKGQMGAVATIRCYGQLTDPGMTISTPW 1233
Query: 199 FSLKICSLSTIAREYLALRSVGSLPF-KDLILSASEKSSGSQDQSWKIPGLLHEYIKENH 257
K+ SLSTI REY AL S+ + +D I A D + ++ + Y
Sbjct: 1234 KISKLYSLSTINREYGALLSLPHIESQRDQIFHAKAARMPDIDPA-EVEKAMSTY---KI 1289
Query: 258 NASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLREIKRGP 317
N Q AI + FVLIQGPPGTGKT TI L++ + + + G +E+ P
Sbjct: 1290 NEPQATAIIGAMASTGFVLIQGPPGTGKTSTICALVARFMSRRAIPITAPGS-KEVPAKP 1348
Query: 318 EL 319
++
Sbjct: 1349 KI 1350
>gi|412990245|emb|CCO19563.1| predicted protein [Bathycoccus prasinos]
Length = 688
Score = 235 bits (600), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 171/558 (30%), Positives = 264/558 (47%), Gaps = 116/558 (20%)
Query: 262 LEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLREIKRGPELPM 321
+ I E +L + F +++GPPGTGKT T+ G+L+ + L +
Sbjct: 148 MGTIDEDILAEPFTIVRGPPGTGKTHTLFGILNTL---------------------HLIL 186
Query: 322 HEKYNHWGRASPWL----VGANPRDNIMPIDGDDGFFPTTGNELKPEVVNSSRRYRVRVL 377
++Y +G + + VG + + D +KP R+L
Sbjct: 187 FQRY--YGSVTALIEGRNVGRSTNSQHGKLKNHDACRDIEKIFVKP-----------RIL 233
Query: 378 VCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIG----------------------- 414
VCAPSN+A+D I ++L G + N Y P I+R+G
Sbjct: 234 VCAPSNAAVDNICEKVLKVGFKQTNNMPYRPGIIRLGAFDALISDDIKSILIQTKIKALL 293
Query: 415 ---------LKAHHSVNSVAIDHLVE-------------------QKRDDSAAD------ 440
L + N +AI+ +E + RD A+
Sbjct: 294 SLSEIEWNKLYSQFYFNVLAINQQIENINLTGTITHSIDMYIQSIEIRDRCIAELARLEL 353
Query: 441 ---KQKHGAT--RKDRDS-----IRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIID 490
K+ G RK+ + + ++ L+EA IV +TL+ G L K + FDV++ID
Sbjct: 354 VNTKRTPGLNPGRKNESTELYIELETSFLDEAEIVFTTLTLCGRHTLKKNSKVFDVLLID 413
Query: 491 EAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVK 550
EAAQA E ATL+PL G K L+GD QLP+T+IS A+ +G SLF+RL +
Sbjct: 414 EAAQANELATLIPLTLGVKHCILIGDNFQLPSTIISERAKTAKFGRSLFQRLLENDFDFI 473
Query: 551 MLKTQYRMHPEVRSFPSREFYDEALEDGSDVED--YTTRDWHEYRCFGPFSFFDIHEGKE 608
L QYRM PE+R FPSR FYD L D + + + W P+ FD + E
Sbjct: 474 SLSIQYRMLPEIRHFPSRFFYDGILTDDPSMSNKGVMNKMWPS----EPYLLFDTGDTFE 529
Query: 609 SQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFG 668
++ + GS +N+ EV + L SM P ++ +A+I+PY+ Q ++ ++TFG
Sbjct: 530 TR-SNRGSVVNLFEVSLIFSLLKCFTSMNPG-RTLQSIAVITPYKEQKDLIEQTLRKTFG 587
Query: 669 VESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVG 728
S V ++T+DG QG+E + I SCVRA++ +IGFL+D +R+NV ITRAK ++G
Sbjct: 588 -RSTSVPCVSTIDGFQGKECEFVIISCVRATN--NIGFLSDAQRLNVAITRAKKRCWILG 644
Query: 729 CASTLREDKHWNNLVKSA 746
++L DK W ++V+ A
Sbjct: 645 NLNSLCRDKIWRHVVEDA 662
>gi|328866781|gb|EGG15164.1| Regulator of nonsense transcripts 1 like protein [Dictyostelium
fasciculatum]
Length = 1358
Score = 235 bits (599), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 152/357 (42%), Positives = 211/357 (59%), Gaps = 41/357 (11%)
Query: 376 VLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIG-LKA-HHSVNSVAIDHLVEQK 433
+LVCAPSN+A+DE+ LR + S TP IVRIG L+A + V+S+ I+
Sbjct: 532 ILVCAPSNTAVDEVGLR---LLDDGLGLGSETPDIVRIGRLEAVNKKVHSICIN------ 582
Query: 434 RDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAA 493
KH ++ + IR EA I+ +TLS + S +L + V+IIDE+
Sbjct: 583 ---------KHSKFKEKKRMIR-----EARILLTTLSGAASKIL---DASPSVIIIDEST 625
Query: 494 QAVEPATLVPLATGCK-QVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKML 552
Q+ EP+TL+PL +V L+GDP QLP TV S ++ GY SLF+RL PV ML
Sbjct: 626 QSCEPSTLIPLLLNPNSKVILIGDPKQLPPTVFSKISSRHGYNVSLFERLSNY-LPVHML 684
Query: 553 KTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPA 612
TQYRMHP + FPS+ FY L+DG +V YT ++ + +GP +F++I E +E
Sbjct: 685 DTQYRMHPSISKFPSQRFYQSKLKDGENVVKYTNSFYNNAK-YGPINFYNIPESQEVSEN 743
Query: 613 GSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQ 672
G+ S NI E +V +L KL+ YP++K S + II+PY+ Q K+ E G ++
Sbjct: 744 GN-SLKNILESKYVFVLLKKLVQEYPEVKKMS-VGIITPYKLQKKELL----EARGAFNE 797
Query: 673 KV-VDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVG 728
K+ V + TVDG QG EKD+ IFSCVR K IGFL+D RR+NVGITRA+ +I VVG
Sbjct: 798 KMDVVVNTVDGFQGAEKDIIIFSCVR---NKRIGFLSDIRRINVGITRARKAIYVVG 851
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 114/257 (44%), Gaps = 32/257 (12%)
Query: 62 DDYLATFEPLLFEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADEVESI 121
D Y + PL+FEE+K QI+ K + + + G + F + SV A +V+S+
Sbjct: 281 DQYNSFIVPLMFEELKEQIVSK-----ITDSGATVNGHDGLLNLFKIQSV---ATKVKSL 332
Query: 122 SPNDLLLLSKEEFKEGSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHI---NKDAVKSQ 178
+ + +L +K S Y LV Q N +Y+ +VI N + +S
Sbjct: 333 TADSTGMLLDFNYKAESRDKDLYKEDLV-LLQINAKPTPLYVFAQVISAPLPNGKSDQSC 391
Query: 179 RLLNI--HSLITSSVSAVE---------KRLFSLKICSLSTIAREYLALRSVGSLPFKDL 227
R+ I +L + +E + K+ +L T RE +++ S L
Sbjct: 392 RVYIIDEETLAPHTTEFIEALANLRKTKTEFYVSKVANLITFERELKSIKQFTSHRLSKL 451
Query: 228 ILSA-----SEKSSGSQDQSWKIPGLLHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPG 282
+LS K+ + QS+ IP L N N SQL AI + +++ LIQGPPG
Sbjct: 452 VLSPRTFIEDRKNMIVKKQSFIIPSHLD---LGNLNPSQLSAIQKSMIQDELTLIQGPPG 508
Query: 283 TGKTQTILGLLSAILHA 299
TGKT IL LL I H+
Sbjct: 509 TGKTTIILNLLR-IFHS 524
>gi|255544500|ref|XP_002513311.1| splicing endonuclease positive effector sen1, putative [Ricinus
communis]
gi|223547219|gb|EEF48714.1| splicing endonuclease positive effector sen1, putative [Ricinus
communis]
Length = 2110
Score = 235 bits (599), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 146/372 (39%), Positives = 205/372 (55%), Gaps = 38/372 (10%)
Query: 424 VAIDHLVEQKRD-------DSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSAL 476
V + L EQK+ A +K+ + + + +R +IL EA IV +TLS SG L
Sbjct: 1382 VKLRKLYEQKKQIFKDLSTAQAQEKKTNEEIKNMKHKLRKSILKEAEIVVTTLSGSGGDL 1441
Query: 477 -------LSKLNHG-------FDVVIIDEAAQAVEPATLVPL----ATGCKQVFLVGDPV 518
+S G FD VIIDEAAQA+EPATL+PL + G K + +VGDP
Sbjct: 1442 YGVCSESMSSYKFGNPSERTLFDAVIIDEAAQALEPATLIPLQLLKSNGTKCI-MVGDPK 1500
Query: 519 QLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDG 578
QLPATV+S VA Y S+F+RLQRAG+PV ML QYRMHP++ FPS FYD L +G
Sbjct: 1501 QLPATVLSNVASKFLYECSMFERLQRAGHPVTMLTKQYRMHPDICQFPSLHFYDGKLLNG 1560
Query: 579 SDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSG--SWINIDEVDFVLLLFHKLISM 636
++ +HE GP++F+D+ +G+E + S S N E D + L
Sbjct: 1561 ENMSSKLV-PFHETEGLGPYAFYDVIDGQELRGKNSAAFSLYNEREADAAVELLRFFKKR 1619
Query: 637 YPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCV 696
+P ++ II+PY+ Q+ + R FG ++ TVDG QGRE D+ I S V
Sbjct: 1620 HPSEFEGGKIGIITPYKCQLSLLRSRLSSAFGSSVIADMEFNTVDGFQGREVDILILSSV 1679
Query: 697 RAS---------DKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAE 747
RA + SIGF+AD RRMNV +TRAK S+ + G A TL+ + +W L+K A+
Sbjct: 1680 RAGEAYTHVNGVNSSSIGFVADVRRMNVALTRAKLSLWIFGNARTLQANHNWAALIKDAK 1739
Query: 748 KQDCLFRVSKPY 759
+++ + V +PY
Sbjct: 1740 QRNLVISVKRPY 1751
Score = 102 bits (254), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 123/443 (27%), Positives = 196/443 (44%), Gaps = 69/443 (15%)
Query: 21 ILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKAQI 80
IL +YF V + D+ DR L+EV ++ + Y+ F+PL+ EE KAQ+
Sbjct: 907 ILEINYFEAVGLASASEDE-----DRTVGRLKEVPVCFQSPEQYVEIFQPLVLEEFKAQL 961
Query: 81 ----IQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADEVESISP----NDLLLLSKE 132
++ E++ L V+ D FHL ++ D V ++S NDL+LL+KE
Sbjct: 962 HSSFLEMSSWEDMYYGNLS-VLSVERVDDFHLVRFVHD-DNVSALSKIFSENDLVLLTKE 1019
Query: 133 EFKEGSTFPTTYAFALVEHCQ------ANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSL 186
+ S + VE + A++L +R Y +N+ ++LL
Sbjct: 1020 APQSNSH--DVHMVGKVERRERDNKRRASMLLIRFYFLNGSSRLNQ---ARKQLLE---- 1070
Query: 187 ITSSVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQS---- 242
+ + +I S++ RE+ L S+ +P IL + S G
Sbjct: 1071 --------RSKWHASRIMSITPQLREFQVLSSIKDIPILSAILKPVKDSPGYNKSRELAL 1122
Query: 243 WKIPGLLHEYIKENHNASQLEAIHEGL----LRKAF--VLIQGPPGTGKTQTILGLLSAI 296
++ L + ++ + N SQLEAI + +K F LIQGPPGTGKT+TI+ ++S +
Sbjct: 1123 GRLSQPLQQALEASFNDSQLEAISVAIGLPNSKKDFELSLIQGPPGTGKTRTIVAIVSGL 1182
Query: 297 ---LHATPARVHSKGGLREIKRGPELPMHEKYNH-WGRASPWLVGANPRDNIMPIDGDDG 352
LH T HS G R + K + A W A R ++ D G
Sbjct: 1183 LGSLHGTNDAKHSLNG-RPNNSSCSMNTRPKVSQSVALARAWQDAALARQ----LNEDVG 1237
Query: 353 FFPTTGNELKPEVVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
NE P + + RVL+CA SN+A+DE+V R+ + G+ + + Y P IVR
Sbjct: 1238 -----RNEESP-----AGYLKRRVLICAQSNAAVDELVSRISSGGLYGSDGKMYKPYIVR 1287
Query: 413 IG--LKAHHSVNSVAIDHLVEQK 433
+G H + ID LV+ +
Sbjct: 1288 VGNAKTVHQNSMPFFIDTLVDHR 1310
>gi|111219431|ref|XP_646847.2| DNA2/NAM7 helicase family protein [Dictyostelium discoideum AX4]
gi|90970906|gb|EAL72919.2| DNA2/NAM7 helicase family protein [Dictyostelium discoideum AX4]
Length = 2314
Score = 234 bits (598), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 141/371 (38%), Positives = 217/371 (58%), Gaps = 35/371 (9%)
Query: 373 RVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAID-HLVE 431
+ ++LVC PS++++DE+ R L + + + + Y P +VRIG + +++ D H +
Sbjct: 1440 KFKILVCGPSHASVDEVAKRCLKKSLINVDGKPYLPNMVRIG-----KLQNISPDCHRI- 1493
Query: 432 QKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDE 491
S DK A RK+ I+ A IV STLS SGS + + N ++V++DE
Sbjct: 1494 -----SPYDKT--PAQRKE-------IIRNANIVFSTLSASGSGSV-RSNFKANIVLVDE 1538
Query: 492 AAQAVEPATLVPLATG-CKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVK 550
+ Q+ EPA+L+PL G +++ LVGDP+QLP T+ S + G SLF+RL + PV+
Sbjct: 1539 STQSSEPASLIPLCIGNIEKLILVGDPLQLPPTIFSSGSAENGLNISLFERLSKV-LPVE 1597
Query: 551 MLKTQYRMHPEVRSFPSREFYDEALEDGSDVED--YTTRDWHEYRCFGPFSFFDIHEGKE 608
ML TQYRMHP + FPS +FY + L DG +V+ Y ++H +GP F+D+ + KE
Sbjct: 1598 MLNTQYRMHPTISRFPSNQFYKDRLLDGDNVKSLVYNQHNFHSDIKYGPIRFYDVIDSKE 1657
Query: 609 SQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFG 668
+G S N E+ V L KL+ YP+ K S II+PY+ Q + +E+ K+ F
Sbjct: 1658 E--SGKRSLKNKLEITMVFTLIKKLVQDYPECKKFS-FGIITPYKLQKSEIKEQHKQ-FN 1713
Query: 669 VESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVG 728
++ +T+DG QG EKD+ I SCVR+ + IGFL+D RR+NV +TRAK + V+G
Sbjct: 1714 YPLN--IETSTIDGVQGSEKDIIILSCVRS---ERIGFLSDRRRINVALTRAKFGLFVIG 1768
Query: 729 CASTLREDKHW 739
+ L++D+ W
Sbjct: 1769 NSKLLKKDRTW 1779
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 115/281 (40%), Gaps = 46/281 (16%)
Query: 50 GLREVKDTYKDVDDYLATFEPLLFEEVKAQIIQKKDEEE---VQEWKLRLV----MECGE 102
+ ++D+Y D +++ +PL+ EE +AQ+ DE E + E L+ ++ +
Sbjct: 1176 NIHSLQDSYSDQSEFVNLMKPLIVEEYRAQLEGDFDEIEGISISEQDGTLIGLDRVKMND 1235
Query: 103 ADGFHL--------PSVTYE---ADEVESISPNDLLLLSKEEFKEGSTFPTTYAFALVEH 151
H +T+ DE+E I ND+LL F +H
Sbjct: 1236 TPTIHSFQELSEDSVEITFNIKVKDELEEIYLNDILL-----------------FKAFDH 1278
Query: 152 CQANLLRLRMYLAGEVIHINKDAVKSQRLLN--IHSLITS--SVSAVEKR-----LFSLK 202
+ L + + K + + +L+ LI SVS KR L +K
Sbjct: 1279 TNKPMFALSLVTRSSELKSKKQKIICEFVLSDSTKPLIEKFYSVSLNSKRYSKDILHFIK 1338
Query: 203 ICSLSTIAREYLALRSV-GSLPFKDLILSAS-EKSSGSQDQSWKIPGLLHEYIKENHNAS 260
+ + +T RE A S + IL S E + +IP LL + NAS
Sbjct: 1339 VSNSTTFIRELEATEEFKNSKTLLNQILQPSLEVYNLMTSMRMEIPSLLRSICIQELNAS 1398
Query: 261 QLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATP 301
Q AI L +K LIQGPPGTGKT TI LLS +L P
Sbjct: 1399 QFNAIETSLSKKGITLIQGPPGTGKTTTIYYLLSILLAINP 1439
>gi|392575976|gb|EIW69108.1| hypothetical protein TREMEDRAFT_31469 [Tremella mesenterica DSM 1558]
Length = 1969
Score = 233 bits (594), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 134/328 (40%), Positives = 196/328 (59%), Gaps = 11/328 (3%)
Query: 433 KRDDSAADKQKH-GATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDE 491
K D+A D +H ATR+ R +L EA ++C+TL+ +G LS + F+ VIIDE
Sbjct: 1615 KAKDAARDATRHLDATRRQ---AREIVLKEADVICATLAGAGHETLSA--YTFETVIIDE 1669
Query: 492 AAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYP-VK 550
AAQA+E + L+PL GC + +VGDP QLP T ++P E Y SLF RL R V
Sbjct: 1670 AAQAIELSCLIPLKYGCTRCIMVGDPQQLPPTTLNPDGEKYAYNESLFVRLARENRSNVH 1729
Query: 551 MLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQ 610
+L QYRMHP++ PS+ FY AL+DG ++E T WHE + +GP+ FF+I EG E +
Sbjct: 1730 LLSIQYRMHPDISRLPSKVFYHGALKDGPNMERNTKAVWHENKNYGPYRFFNI-EGSEIK 1788
Query: 611 PAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVE 670
AG+ + + + V + H + + ++ II+ YR Q+ + + +F + FG
Sbjct: 1789 -AGTSTKNPEEAIAAVNIYKHLEEDFGDRTNLALRVGIITMYREQMYEIKRQFLQAFGGS 1847
Query: 671 SQKVVDITTVDGCQGREKDVAIFSCVRAS-DKKSIGFLADYRRMNVGITRAKSSILVVGC 729
++++ TVDG QG+EKD+ I SCVR+ + ++IGFL D RRMNV +TRAKSS+ +VG
Sbjct: 1848 IMEMIEFNTVDGFQGQEKDIIILSCVRSGPNLRTIGFLRDERRMNVALTRAKSSLWIVGN 1907
Query: 730 ASTL-REDKHWNNLVKSAEKQDCLFRVS 756
STL R D+ W +V A ++ VS
Sbjct: 1908 GSTLERSDERWKVIVGDARERGFFLEVS 1935
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 111/446 (24%), Positives = 172/446 (38%), Gaps = 112/446 (25%)
Query: 10 DEASIFRFCKIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFE 69
D S++R+ +L WD + + KV + + L V T+ D Y
Sbjct: 1216 DLNSLYRY---VLAWDPTHIGPHPP-----HPPKVAQEFMQLLRVPTTFPDAKRYEQIML 1267
Query: 70 PLLFEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADEVESISPNDLLLL 129
PL EE+ AQ + KD G + S YE D L
Sbjct: 1268 PLFLEELWAQFVNGKDN-----------TAHGMGIMVEISSRAYEDD-----------FL 1305
Query: 130 SKEEFKEGSTFPTTYA----FALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHS 185
E +G+ P + L++ A L + + G A+K + L ++
Sbjct: 1306 DMELVVQGNIQPDFFVNETDIVLLQQPGARTLFAK--VQGFRRKFKDTALKVRILTSMDQ 1363
Query: 186 LITSSVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPF--KDLI--LSASEKSSGSQDQ 241
+ S E + K SLST RE+ AL+ LP+ K L+ + A++ ++
Sbjct: 1364 RELGAKSRWELK----KHTSLSTAVREFAALKG---LPYYEKPLLRDILAAKGATMPPLS 1416
Query: 242 SWKIPGLLHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATP 301
S ++ + Y + N Q +AI + F LIQGPPGTGKT+TI GL
Sbjct: 1417 SREVDRAMRSY---DVNEPQAKAILGAMQVNGFALIQGPPGTGKTKTISGL--------- 1464
Query: 302 ARVHSKGGLREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNEL 361
VG + +PI G P +
Sbjct: 1465 ----------------------------------VGKFMSERSIPIAMGHGEKP-----V 1485
Query: 362 KPEVVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKA--HH 419
KP ++LVCAPSN+A+DE+ RL+N G+ + P IVRIG++ +
Sbjct: 1486 KP-----------KLLVCAPSNAAIDEVCKRLMN-GVPSSDGSRLNPTIVRIGIETSVNI 1533
Query: 420 SVNSVAIDHLVEQKRDDSAADKQKHG 445
+V V++D LVE + + + K G
Sbjct: 1534 AVKDVSLDSLVEARVNADPSSKGGGG 1559
>gi|328871485|gb|EGG19855.1| hypothetical protein DFA_06958 [Dictyostelium fasciculatum]
Length = 1406
Score = 232 bits (592), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 151/357 (42%), Positives = 210/357 (58%), Gaps = 41/357 (11%)
Query: 376 VLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIG-LKA-HHSVNSVAIDHLVEQK 433
+LVCAPSN+A+DE+ LR + S TP IVRIG L+A + V+S+ I+
Sbjct: 580 ILVCAPSNTAVDEVGLR---LLDDGLGLGSETPDIVRIGRLEAVNKKVHSICIN------ 630
Query: 434 RDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAA 493
KH ++ + IR EA I+ +TLS + S +L + V+IIDE+
Sbjct: 631 ---------KHSKFKEKKRMIR-----EARILLTTLSGAASKIL---DASPSVIIIDEST 673
Query: 494 QAVEPATLVPLATGCK-QVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKML 552
Q+ EP+TL+PL +V L+GDP QLP TV S ++ GY SLF+RL PV ML
Sbjct: 674 QSCEPSTLIPLLLNPNSKVILIGDPKQLPPTVFSKISSRHGYNVSLFERLSNY-LPVHML 732
Query: 553 KTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPA 612
TQYRMHP + FPS+ FY L+DG +V YT ++ + +GP +F++I E +E
Sbjct: 733 DTQYRMHPSISKFPSQRFYQSKLKDGENVVKYTNSFYNNAK-YGPINFYNIPESQEVSEN 791
Query: 613 GSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQ 672
G+ S NI E +V +L KL+ YP++K + II+PY+ Q K+ E G ++
Sbjct: 792 GN-SLKNILESKYVFVLLKKLVQEYPEVKKMI-VGIITPYKLQKKELL----EARGAFNE 845
Query: 673 KV-VDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVG 728
K+ V + TVDG QG EKD+ IFSCVR K IGFL+D RR+NVGITRA+ +I VVG
Sbjct: 846 KMDVVVNTVDGFQGAEKDIIIFSCVR---NKRIGFLSDIRRINVGITRARKAIYVVG 899
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 112/257 (43%), Gaps = 32/257 (12%)
Query: 62 DDYLATFEPLLFEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADEVESI 121
D Y + PL+FEE+K QI+ K + + + G + F + SV A +V+S+
Sbjct: 329 DQYNSFIVPLMFEELKEQIVSK-----ITDSGATVNGHDGLLNLFKIQSV---ATKVKSL 380
Query: 122 SPNDLLLLSKEEFKEGSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLL 181
+ + +L +K S Y LV Q N +Y+ +VI KS +
Sbjct: 381 TADSTGMLLDFNYKAESRDKDLYKEDLV-LLQINAKPTPLYVFAKVISAPLPTGKSDQSC 439
Query: 182 NIHSL--------------ITSSVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDL 227
++ + +++ + + K+ +L T RE +++ S L
Sbjct: 440 RVYIIDEETLAPHTTEFIEALANLRKTKTEFYVSKVANLITFERELKSIKQFTSHRLSKL 499
Query: 228 ILSA-----SEKSSGSQDQSWKIPGLLHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPG 282
+LS K+ + QS+ IP L N N SQL AI + +++ LIQGPPG
Sbjct: 500 VLSPRTFIEDRKNMIVKKQSFIIPSHLD---LGNLNPSQLSAIQKSMIQDELTLIQGPPG 556
Query: 283 TGKTQTILGLLSAILHA 299
TGKT IL LL I H+
Sbjct: 557 TGKTTIILNLLR-IFHS 572
>gi|297605678|ref|NP_001057480.2| Os06g0309400 [Oryza sativa Japonica Group]
gi|255676975|dbj|BAF19394.2| Os06g0309400 [Oryza sativa Japonica Group]
Length = 291
Score = 231 bits (588), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 137/270 (50%), Positives = 177/270 (65%), Gaps = 20/270 (7%)
Query: 16 RFCKIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEE 75
RF KI+L WDY RLV +S K + GL VK+TY V +YLA FEPLLFEE
Sbjct: 29 RFHKIVLSWDYVRLVADS--------KGGQQQAKGLGRVKNTYASVAEYLAVFEPLLFEE 80
Query: 76 VKAQIIQ-KKDEEEV--QEWKLRLVMECGEADGFHLPSVTYEADEVESISPNDLLLLSKE 132
VKAQI+Q + DEEE Q+W+ +V C E++GFH S+ D E +S NDLLLLSKE
Sbjct: 81 VKAQIVQGRSDEEEEAGQDWQKGIVASCTESEGFHKVSMAVLDDFREMVSENDLLLLSKE 140
Query: 133 EFKEGSTFPTTYAFALVEHCQA-NLLRLRMYLAGEVIHIN-KDAVKSQRLLNIHSLITSS 190
+F+EG T P+ YAFALVE + LR ++AGE+ ++N V RL I S+ +++
Sbjct: 141 KFEEGVT-PSAYAFALVEQRGGRETISLRTFVAGEIKNLNVAKPVSCSRLQRIASIFSTT 199
Query: 191 VSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQ--SWKIPGL 248
E L+ LKICSLSTI RE+ + SV SLPFKDLILSASEK+SG DQ +W +P
Sbjct: 200 ----ESFLWILKICSLSTIMREFSGMHSVASLPFKDLILSASEKNSGGNDQNRAWNVPEP 255
Query: 249 LHEYIKENHNASQLEAIHEGLLRKAFVLIQ 278
L +Y+K N N SQL+A++ GL R++FVLIQ
Sbjct: 256 LMDYLKTNLNDSQLDAVNAGLSRRSFVLIQ 285
>gi|54290630|dbj|BAD62201.1| component of a tRNA splicing complex-like [Oryza sativa Japonica
Group]
Length = 303
Score = 231 bits (588), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 136/270 (50%), Positives = 177/270 (65%), Gaps = 20/270 (7%)
Query: 16 RFCKIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEE 75
RF KI+L WDY RLV +S+ + GL VK+TY V +YLA FEPLLFEE
Sbjct: 29 RFHKIVLSWDYVRLVADSKGGQQQAK--------GLGRVKNTYASVAEYLAVFEPLLFEE 80
Query: 76 VKAQIIQ-KKDEEEV--QEWKLRLVMECGEADGFHLPSVTYEADEVESISPNDLLLLSKE 132
VKAQI+Q + DEEE Q+W+ +V C E++GFH S+ D E +S NDLLLLSKE
Sbjct: 81 VKAQIVQGRSDEEEEAGQDWQKGIVASCTESEGFHKVSMAVLDDFREMVSENDLLLLSKE 140
Query: 133 EFKEGSTFPTTYAFALVEHCQA-NLLRLRMYLAGEVIHIN-KDAVKSQRLLNIHSLITSS 190
+F+EG T P+ YAFALVE + LR ++AGE+ ++N V RL I S+ +++
Sbjct: 141 KFEEGVT-PSAYAFALVEQRGGRETISLRTFVAGEIKNLNVAKPVSCSRLQRIASIFSTT 199
Query: 191 VSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQ--SWKIPGL 248
E L+ LKICSLSTI RE+ + SV SLPFKDLILSASEK+SG DQ +W +P
Sbjct: 200 ----ESFLWILKICSLSTIMREFSGMHSVASLPFKDLILSASEKNSGGNDQNRAWNVPEP 255
Query: 249 LHEYIKENHNASQLEAIHEGLLRKAFVLIQ 278
L +Y+K N N SQL+A++ GL R++FVLIQ
Sbjct: 256 LMDYLKTNLNDSQLDAVNAGLSRRSFVLIQ 285
>gi|388579514|gb|EIM19837.1| hypothetical protein WALSEDRAFT_40862 [Wallemia sebi CBS 633.66]
Length = 1987
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 136/344 (39%), Positives = 195/344 (56%), Gaps = 21/344 (6%)
Query: 436 DSAADKQKHGATRKD--RDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAA 493
D A D QK A +D R + R A++ EA +VCSTLS +G L++L F+ VIIDEAA
Sbjct: 1478 DKARDNQKSTAKARDASRRTHRRAVMMEADVVCSTLSGAGKGDLAELPVEFETVIIDEAA 1537
Query: 494 QAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYP-VKML 552
QAVE + L+P GCK+ L+GD QLP TV+S A GY SLF RL + V +L
Sbjct: 1538 QAVEVSALIPFKYGCKRPILIGDQHQLPPTVMSTEASKKGYSRSLFVRLMESNQGRVHLL 1597
Query: 553 KTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPA 612
QYRMHP++ PS FY+ L+DG + + T WH FG + FFD G+
Sbjct: 1598 NEQYRMHPDISKLPSAVFYNGHLKDGPMMAEKTKAPWHSNDLFGTYKFFDFAGGERR--- 1654
Query: 613 GSGSWINIDEVDFVLLLFHKLISMY-PQLKSSSQLAIISPYRHQVKQFQERFKETFGVES 671
S+ N DE V+ L+ +L Y + ++AII+ Y+ QV+ + K+ F
Sbjct: 1655 VDHSYQNPDEASVVISLYERLRKQYGGEFSLDYRVAIIATYKQQVRYIRNELKKRFWNVD 1714
Query: 672 QKV---VDITTVDGCQGREKDVAIFSCVRASDKKS-----------IGFLADYRRMNVGI 717
+ + VD+ TVDG QG+EK + I S VR++ + IGFL D RRMNV +
Sbjct: 1715 KDILSKVDVNTVDGFQGQEKTIIILSTVRSTKFEDDGIYKERGGGPIGFLKDIRRMNVAL 1774
Query: 718 TRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRVSKPYAS 761
TRA+SS+ +VG A L+ D+ W ++V AE++D L ++++ + S
Sbjct: 1775 TRAQSSLFIVGHADKLKYDQTWQHIVDDAEQRDLLQKINRNHFS 1818
>gi|66804901|ref|XP_636183.1| hypothetical protein DDB_G0289529 [Dictyostelium discoideum AX4]
gi|60464558|gb|EAL62696.1| hypothetical protein DDB_G0289529 [Dictyostelium discoideum AX4]
Length = 1677
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 138/371 (37%), Positives = 208/371 (56%), Gaps = 32/371 (8%)
Query: 373 RVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQ 432
+ ++LVC PS++++DE+ R L + + + + P +VR G
Sbjct: 1238 KFKILVCGPSHASVDEVAKRCLKNLLNSDG-QIFKPNMVRTG------------------ 1278
Query: 433 KRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEA 492
+++ + + QK K+ S R ++ A IV STL+ SGS + + N D+V+IDE+
Sbjct: 1279 RKEKISPECQKISLKNKN-SSRRINLIKSASIVFSTLAGSGSKAIFE-NFSPDIVLIDES 1336
Query: 493 AQAVEPATLVPLATG-CKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKM 551
Q+ EP +++PL+ G K++ LVGDPVQLP T+ S G SLF+RL ++ V+
Sbjct: 1337 TQSSEPTSIIPLSLGSVKKLILVGDPVQLPPTIFSKQGADCGLKISLFERLAKS-IDVQF 1395
Query: 552 LKTQYRMHPEVRSFPSREFYDEALEDGSDV--EDYTTRDWHEYRCFGPFSFFDIHEGKES 609
L TQYRMHP F S EFY+ L+DG +V + Y +H FGP FFD+ K +
Sbjct: 1396 LNTQYRMHPVTSKFISEEFYNGTLKDGENVSIDSYNNCKFHFDPSFGPMKFFDL--PKSN 1453
Query: 610 QPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGV 669
Q S +N DE+D V L +LI YP+ K S II+PY+ Q+ Q +E+ +
Sbjct: 1454 QKVIKKSIMNQDEIDKVFTLIKELIEKYPECKKLS-FGIITPYKLQMNQIKEQLNRS--- 1509
Query: 670 ESQKV-VDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVG 728
E + + ++T+DG QG EKD+ I SCVR+ +K IGFL+D RR+NV +TRAK + V+G
Sbjct: 1510 EHHNLNISVSTIDGVQGSEKDIIIMSCVRSIEKFGIGFLSDRRRINVALTRAKLGLYVIG 1569
Query: 729 CASTLREDKHW 739
L +D W
Sbjct: 1570 TYKVLAKDNTW 1580
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 117/267 (43%), Gaps = 37/267 (13%)
Query: 50 GLREVKDTYKDVDDYLATFEPLLFEEVKAQ----------IIQKKDE--EEVQEWKLRLV 97
G+ E+ D Y +Y +PL+F++ +AQ I KD E + K+
Sbjct: 985 GIGELSDNYTGEKEYQIVNKPLIFDDFRAQVENGINALNGINSAKDGTFEGFDKIKMNEA 1044
Query: 98 MECGEADGFHLPSVTYEA------DEVESISPNDLLLLSKEEFKEGSTFPTTYAFALVEH 151
+E + +T E +++E IS D+LL FK T + F +V
Sbjct: 1045 IEVVQISR-QTKFITVELIIHGNRNKLEEISVGDILL-----FKVIGLDGTKFTFGIVRK 1098
Query: 152 CQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSAVEKRLFSLKICSLSTIAR 211
+NL++ ++ V D + S H S S+ + + KI + T R
Sbjct: 1099 T-SNLMQGSLHQQSIVC----DLLYSNP---THFFTKSLNSSTQSSIHYNKISNSVTFIR 1150
Query: 212 EYLALRSVGSLPF-KDLILSASEKSSGSQDQSWKIPGLLHEYIKENHNASQLEAIHEGLL 270
+++ + PF K+LI + ++ +Q + K P L KE N SQL AI L+
Sbjct: 1151 ---SIQEFKASPFIKNLIFNPGCNNNLNQ-KMMKFPPTLETICKEKLNESQLNAIKSSLV 1206
Query: 271 RKAFVLIQGPPGTGKTQTILGLLSAIL 297
LIQGPPGTGKT TI LLS +L
Sbjct: 1207 ESGITLIQGPPGTGKTTTINYLLSVLL 1233
>gi|384249658|gb|EIE23139.1| P-loop containing nucleoside triphosphate hydrolase protein
[Coccomyxa subellipsoidea C-169]
Length = 1148
Score = 230 bits (586), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 142/324 (43%), Positives = 181/324 (55%), Gaps = 19/324 (5%)
Query: 453 SIRSAILNEAVIVCSTLSFSGSALLSKLNHG---FDVVIIDEA----AQAVEPATLVPLA 505
++R+A++ EA V TLS +G LL+ G FD VIIDEA AQAVEPA L+PL
Sbjct: 773 AVRAAVIREAEAVVCTLSSAGGELLAIQAGGLEAFDAVIIDEASTLAAQAVEPAALIPLQ 832
Query: 506 T--GCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVR 563
+V LVGDP QLPATV+S AE G SLF+RLQ+ G V +L QYRMHP +
Sbjct: 833 MLKPDGKVVLVGDPKQLPATVVSREAEAAGLSRSLFERLQQGGVAVSLLAEQYRMHPAIS 892
Query: 564 SFPSREFYDEALEDGSDV-EDYTTRDWHEYRCFGPFSFFDI-----HEGKESQPAGSGSW 617
++PS FY L+D V + T +H CF PF+FFD G S + S
Sbjct: 893 AWPSSFFYSGHLKDAPAVLGNARTAPFHRTPCFPPFAFFDCREGEESRGSGSGSGAAASL 952
Query: 618 INIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDI 677
N EVD LF L M K+ +A++S Y+ QV F+ G V+
Sbjct: 953 YNSTEVDLASSLFTGL--MKEHGKALGSVAVLSSYKAQVTALCSHFQRVHGAAKMASVEF 1010
Query: 678 TTVDGCQGREKDVAIFSCV--RASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLRE 735
T+DG QGRE DV IFSCV RASD +GFLAD RRMNV +TRA+ S+ V+G STL+
Sbjct: 1011 ATIDGFQGREADVVIFSCVRARASDSGGLGFLADVRRMNVALTRARQSLWVIGRVSTLQG 1070
Query: 736 DKHWNNLVKSAEKQDCLFRVSKPY 759
W L+K A + CLF +P+
Sbjct: 1071 CAPWAALIKHAAAKGCLFAALRPF 1094
>gi|125587374|gb|EAZ28038.1| hypothetical protein OsJ_12005 [Oryza sativa Japonica Group]
Length = 323
Score = 229 bits (585), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 137/270 (50%), Positives = 177/270 (65%), Gaps = 20/270 (7%)
Query: 16 RFCKIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEE 75
RF KI+L WDY RLV +SK + GL VK+TY V +YLA FEPLLFEE
Sbjct: 29 RFHKIVLSWDYVRLVA--------DSKGGQQQAKGLGRVKNTYASVAEYLAVFEPLLFEE 80
Query: 76 VKAQIIQ-KKDEEEV--QEWKLRLVMECGEADGFHLPSVTYEADEVESISPNDLLLLSKE 132
VKAQI+Q + DEEE Q+W+ +V C E++GFH S+ D E +S NDLLLLSKE
Sbjct: 81 VKAQIVQGRSDEEEEAGQDWQKGIVASCTESEGFHKVSMAVLDDFREMVSENDLLLLSKE 140
Query: 133 EFKEGSTFPTTYAFALVEHCQA-NLLRLRMYLAGEVIHIN-KDAVKSQRLLNIHSLITSS 190
+F+EG T P+ YAFALVE + LR ++AGE+ ++N V RL I S+ +++
Sbjct: 141 KFEEGVT-PSAYAFALVEQRGGRETISLRTFVAGEIKNLNVAKPVSCSRLQRIASIFSTT 199
Query: 191 VSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQ--SWKIPGL 248
E L+ LKICSLSTI RE+ + SV SLPFKDLILSASEK+SG DQ +W +P
Sbjct: 200 ----ESFLWILKICSLSTIMREFSGMHSVASLPFKDLILSASEKNSGGNDQNRAWNVPEP 255
Query: 249 LHEYIKENHNASQLEAIHEGLLRKAFVLIQ 278
L +Y+K N N SQL+A++ GL R++FVLIQ
Sbjct: 256 LMDYLKTNLNDSQLDAVNAGLSRRSFVLIQ 285
>gi|449478203|ref|XP_002195542.2| PREDICTED: probable helicase senataxin [Taeniopygia guttata]
Length = 2162
Score = 229 bits (584), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 230/805 (28%), Positives = 345/805 (42%), Gaps = 193/805 (23%)
Query: 58 YKDVDDYLATFEPLLFEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGF-------HLPS 110
++ +DY TF PL+ + Q E V+ K+R C + F H +
Sbjct: 1399 FQGYNDYFNTFFPLMMLNAFETLAQ----EWVENQKVREKGYCFYLENFSADMNTAHFTA 1454
Query: 111 VTYEADEVESISP--NDLLLLS---KEEFKE--GSTFPTTYAFALVEH-CQANLLRLRMY 162
E+D + P +DL+LL ++ F E G + T LV +A+ R
Sbjct: 1455 HLRESDLARQLHPKEDDLILLKVHKEDTFGEESGMEYHTVNHVGLVTRFSRASGCASRQK 1514
Query: 163 LAGEVIHINKDAVKSQRLLNIHSLITSSVSAVEKRLFSLKICSLSTIAREYLALRSVGSL 222
H+ V+++ L+ + K++ + + SL T R++ AL +
Sbjct: 1515 EQQTACHL---TVQTRGNLSFF---------IHKQVKCVVVGSLVTTHRKFKALLLLSRS 1562
Query: 223 PFKDLILSASEKSSGSQDQSWKIPGLLHEYIKENHNASQLEAI---------HEGLLRKA 273
P I++ S +D G+ K +N Q AI H GL +
Sbjct: 1563 PLARPIINPSYNDFCPRDL-LVASGMRIVSYKNEYNEDQKRAIETAYAMVKQHPGLPK-- 1619
Query: 274 FVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLREIKRGPELPMHEKYNHWGRASP 333
LI GPPGTGK++TI+GLLS + LRE R E EK
Sbjct: 1620 ICLIHGPPGTGKSKTIVGLLSRV-------------LRENTRS-EKTAREK--------- 1656
Query: 334 WLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNSSRRYRVRVLVCAPSNSALDEIVLRL 393
+++KP R LVCAPSN+A+DE++ ++
Sbjct: 1657 ------------------------NSKIKPN----------RFLVCAPSNAAVDELMKKI 1682
Query: 394 LNTGIRDENIRSYTP-------KIVRIGLKAHHSVNSVA--------IDHLVEQKRDDSA 438
+ +++ P K+VR+G A S+N+ ++H +++K D
Sbjct: 1683 I-IAFKEKCQNKQEPLGNCGDIKLVRLG--AEKSINNEVRGFSLDKQVEHRMKRKPGDCD 1739
Query: 439 ADKQK---------------HGATRKDRDSIRSAILNEAV-------------------- 463
D QK R ++ + S +LN+ +
Sbjct: 1740 QDIQKKKEALDQKLDMLSRERAMHRCEKREVASQMLNDEIGRLAKERQQLASQLKEVRVH 1799
Query: 464 -------------IVCSTLSFSGSALLSKL--NHGFD---VVIIDEAAQAVEPATLVPLA 505
I+C TLS SG +LL G D VI+DEA Q+ E TL+PL
Sbjct: 1800 SQKVQADIILESDIICCTLSTSGGSLLESAFSRQGLDPFSCVIVDEAGQSCEVETLIPLI 1859
Query: 506 TGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQR-----------AGYPVKMLKT 554
C ++ LVGDP QLP TV S A+ GY SL RLQR PV L
Sbjct: 1860 HRCNKLVLVGDPKQLPPTVKSIKAQQYGYDQSLMARLQRHLEEQVQQNILHSLPVVQLTV 1919
Query: 555 QYRMHPEVRSFPSREFYDEALEDGSDV-EDYTTRDWHEYRCFGPFSFFDIHEGKESQPAG 613
QYRMHP++ FPS Y L+ + E+ + +W F P+ FD+ +G+E +
Sbjct: 1920 QYRMHPDICLFPSNYVYGRTLKTAKAIEENRCSSEWP----FQPYLIFDVADGREER--D 1973
Query: 614 SGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQK 673
+ S+ N EV V+ L + L ++ II+PY Q ++ QE+ F S
Sbjct: 1974 NDSYSNPREVKLVMELIRTIKEKRKDL-GLRRIGIITPYSAQKRKIQEQLDSVFKNNSPG 2032
Query: 674 VVDITTVDGCQGREKDVAIFSCVRA-SDKKSIGFLADYRRMNVGITRAKSSILVVGCAST 732
VD TVD QGREKD I SCVRA S K SIGFL+ +R+NV ITRA+ S+ ++G T
Sbjct: 2033 EVD--TVDAFQGREKDCIIVSCVRANSTKGSIGFLSSLQRLNVTITRARFSLFILGRLQT 2090
Query: 733 LREDKHWNNLVKSAEKQDCLFRVSK 757
L EDK+WN+L++ A+K+ + R ++
Sbjct: 2091 LMEDKNWNHLIQDAQKRGAIIRTTE 2115
>gi|111219429|ref|XP_646844.2| hypothetical protein DDB_G0268924 [Dictyostelium discoideum AX4]
gi|90970905|gb|EAL73051.2| hypothetical protein DDB_G0268924 [Dictyostelium discoideum AX4]
Length = 1772
Score = 229 bits (583), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 138/368 (37%), Positives = 211/368 (57%), Gaps = 33/368 (8%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQKR 434
++LVC PS++++DEI R + + + Y P +VRIG K + S + +I + +R
Sbjct: 1290 KILVCGPSHASVDEIAKRCSKKKLIGLDGKPYLPNMVRIGKKENISPDCHSISIFNKTQR 1349
Query: 435 DDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQ 494
+ S DSI A IV STLS SGS + K N D++++DE+ Q
Sbjct: 1350 EKS--------------DSIY-----RASIVFSTLSGSGSETV-KNNFRADIILVDESTQ 1389
Query: 495 AVEPATLVPLATG-CKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLK 553
+ EP++++PL G +++ LVGDP+QLP T+ S + G SLF+RL + PV+ML
Sbjct: 1390 STEPSSIIPLCIGNIEKLILVGDPLQLPPTIFSTESAENGLNISLFERLSKV-LPVEMLH 1448
Query: 554 TQYRMHPEVRSFPSREFYDEALEDGSDVED--YTTRDWHEYRCFGPFSFFDIHEGKESQP 611
QYRMHP + FPS +FY + L DG +V+ Y ++H +GP F+D+ + KE
Sbjct: 1449 VQYRMHPTISRFPSNQFYRDRLLDGDNVKSLVYNQHNFHSDIKYGPIRFYDVIDSKEE-- 1506
Query: 612 AGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVES 671
+G S N E+ V L KL+ YP+ K S II+PY+ Q + +E+ K+ F
Sbjct: 1507 SGKRSLKNKLEITMVFTLIKKLVQDYPECKKFS-FGIITPYKLQKSEIKEQHKQ-FNYPL 1564
Query: 672 QKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCAS 731
++ +T+DG QG EKD+ I SCVR+ + IGFL+D RR+NV +TRAK + V+G +
Sbjct: 1565 N--IETSTIDGFQGSEKDIIILSCVRS---ERIGFLSDRRRINVALTRAKFGLFVIGNSK 1619
Query: 732 TLREDKHW 739
L++D+ W
Sbjct: 1620 LLKKDRTW 1627
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 57/114 (50%), Gaps = 6/114 (5%)
Query: 192 SAVEKRLFSLKICSLSTIAREYLAL---RSVGSLPFKDLILSASEKSSGS-QDQSWKIPG 247
+ ++++L+ +K+ + T RE A+ R+ G L D IL S K + IP
Sbjct: 1176 NTIKEKLYFIKVSNCITFIRELNAIKDFRNSGIL--FDQILQPSRKDHDILSSKRMAIPS 1233
Query: 248 LLHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATP 301
LL + N SQ +I L K LIQGPPGTGKT TI LLS +L P
Sbjct: 1234 LLRSMCIQELNTSQFNSIETSLSTKGITLIQGPPGTGKTTTIYYLLSILLAINP 1287
>gi|384248536|gb|EIE22020.1| hypothetical protein COCSUDRAFT_17170, partial [Coccomyxa
subellipsoidea C-169]
Length = 367
Score = 229 bits (583), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 135/341 (39%), Positives = 195/341 (57%), Gaps = 15/341 (4%)
Query: 429 LVEQKRDDSAADKQKH--GATRKDRD-SIRSAILNEAVIVCSTLSFSGSALLSKL-NHGF 484
+VE R D+ H G +++ + S+ + + EA +V +TLS +G + +L F
Sbjct: 12 VVELNRLDTVQGLVCHPQGINKREVECSLEMSFVMEAEMVFTTLSSTGRRIFQRLEGTPF 71
Query: 485 DVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQR 544
+ V+IDEAAQA E A L PL G K+ LVGDP QLPATV S + L SLF+RLQR
Sbjct: 72 ETVLIDEAAQASEIAALQPLVFGAKRAVLVGDPQQLPATVKSAKGKELELERSLFERLQR 131
Query: 545 AGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIH 604
AG PVKML QYRMHP +R FPS FY+ LEDG V++ ++E+ P+ FD+
Sbjct: 132 AGCPVKMLSVQYRMHPTIREFPSNYFYNGRLEDGKSVKEAKPPVFYEHPLLKPYVIFDVS 191
Query: 605 EGKESQPAGSGSWINIDEVDFVLLLF---HKLISMYPQLK-SSSQLAIISPYRHQVKQFQ 660
G+E + +G + F F H + S + ++ ++ +++PY+ Q +
Sbjct: 192 HGREQRGGSNGGSLRNQASPFFYSCFLTSHSIFSGWLAMQLGGCEVGVVTPYKQQKTCLR 251
Query: 661 ERFKETFGVESQK------VVDITTVDGCQGREKDVAIFSCVRASDKKS-IGFLADYRRM 713
+ F G E+ V I TVD QG++ DV I SCVRASD+KS +GFLAD RRM
Sbjct: 252 DTFLRAAGPEASAKARPLLTVMIETVDSFQGKQLDVIILSCVRASDRKSGVGFLADVRRM 311
Query: 714 NVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFR 754
NV ITRAK ++ V+G A+TL + W L+ +A ++ C+ +
Sbjct: 312 NVAITRAKQALWVLGSAATLERNPVWAALLANARERGCVIK 352
>gi|66804903|ref|XP_636184.1| hypothetical protein DDB_G0289503 [Dictyostelium discoideum AX4]
gi|60464545|gb|EAL62683.1| hypothetical protein DDB_G0289503 [Dictyostelium discoideum AX4]
Length = 1255
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 136/376 (36%), Positives = 212/376 (56%), Gaps = 32/376 (8%)
Query: 373 RVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQ 432
+ ++LVC PS++++DE+ R L + + +++ P +VR G
Sbjct: 732 KFKILVCGPSHASVDEVAKRCLKNLLNSDG-QNFKPNMVRTG------------------ 772
Query: 433 KRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEA 492
+++ + + QK K+ S R ++ IV STL+ SGS + + N D+V+IDE+
Sbjct: 773 RKEKISPECQKISLKNKN-SSRRINLIKSTSIVFSTLAGSGSKAIFE-NFSPDIVLIDES 830
Query: 493 AQAVEPATLVPLATG-CKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKM 551
Q+ EP +++PL+ G K++ LVGDPVQL T+ S G SLF+RL ++ V+
Sbjct: 831 TQSSEPTSIIPLSLGSIKKLILVGDPVQLAPTIFSKDGADCGLKISLFERLAKS-IDVQF 889
Query: 552 LKTQYRMHPEVRSFPSREFYDEALEDGSDV--EDYTTRDWHEYRCFGPFSFFDIHEGKES 609
L TQYRMHP + F S EFY+ L+DG +V + + +H FGP FF++ K
Sbjct: 890 LNTQYRMHPVISKFISEEFYNGTLKDGENVSIDSFNNCKFHFDPSFGPMKFFNL--PKSD 947
Query: 610 QPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGV 669
Q S +N DE+D V L +LI YP+ K S II+PY+ Q+ Q +E+ +
Sbjct: 948 QIVIKKSIMNQDEIDKVFTLIKELIEKYPECKKLS-FGIITPYKLQMIQIKEQLNRS--- 1003
Query: 670 ESQKV-VDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVG 728
E + + + ++T+DG QG EKD+ I SCVR ++K IGFL+D RR+NV +TRAK + V+G
Sbjct: 1004 EHRYLNISVSTIDGVQGSEKDIIIMSCVRCTEKYGIGFLSDRRRINVALTRAKLGLYVIG 1063
Query: 729 CASTLREDKHWNNLVK 744
+ L +D W N +K
Sbjct: 1064 TSWVLEKDNTWGNFLK 1079
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 115/270 (42%), Gaps = 38/270 (14%)
Query: 50 GLREVKDTYKDVDDYLATFEPLLFEEVKAQ-----------IIQKKDEEEVQEWKLRL-- 96
G+ E+ D + Y PL+F++ +AQ I+ KKD K+++
Sbjct: 474 GIDELSDNFTGDKQYQNLMRPLIFDDFRAQVENGINALNGIILSKKDGTLEGFDKIKMNE 533
Query: 97 ---VMECGEADGFHLPSVTYEAD--EVESISPNDLLLLSKEEFKEGSTFPTTYAFALVEH 151
V++ F + + ++E IS D+LL FK T + F +V
Sbjct: 534 SIEVVQRSRQTEFETVELIIHGNRNKLEEISVGDILL-----FKVIGLDGTKFIFGIVRK 588
Query: 152 CQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSAVEKRLFSLKICSLSTIAR 211
+NL++ ++ V + L+++ SS+ + KI + T R
Sbjct: 589 T-SNLMQGSLHQQSIVCDLFDSNPTYVFTLSLNPSTRSSIDYI-------KISNSVTFIR 640
Query: 212 EYLALRSVGSLPF-KDLILS---ASEKSSGSQDQSWKIPGLLHEYIKENHNASQLEAIHE 267
++ + PF K+LI + + ++ S + K P L KE N SQL AI
Sbjct: 641 ---TIQEFKASPFIKNLIYNPGHNNNNNNNSNQKMMKFPPTLETICKEKLNESQLNAIKS 697
Query: 268 GLLRKAFVLIQGPPGTGKTQTILGLLSAIL 297
L+ LIQGPPGTGKT TI LLS +L
Sbjct: 698 SLVESGITLIQGPPGTGKTTTINYLLSVLL 727
>gi|164658495|ref|XP_001730373.1| hypothetical protein MGL_2755 [Malassezia globosa CBS 7966]
gi|159104268|gb|EDP43159.1| hypothetical protein MGL_2755 [Malassezia globosa CBS 7966]
Length = 1900
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 151/443 (34%), Positives = 218/443 (49%), Gaps = 75/443 (16%)
Query: 375 RVLVCAPSNSALDE---------------IVLRLLNTGIRDENIRSYTPKIVRIGLKAHH 419
R+L+CAPSN+A+DE +V RL+ G RDE + + L H
Sbjct: 1216 RMLLCAPSNAAIDELVSRIKDGVDIDGKRVVPRLVRLG-RDEAVNPAVRDVTLDALAEHA 1274
Query: 420 SVNSVAIDHLVEQ----------KRDD--------------------------------- 436
A E+ KR +
Sbjct: 1275 GSKDTAASRAAEELQRVERAWRDKRAELEQSASAPTSSTSRERTRALQAELNELTDKRFE 1334
Query: 437 ------SAADKQKHGATRKD--RDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVI 488
S + K G+ R + R R +IL+EA IVC+TL+ +G +L + + FD V+
Sbjct: 1335 LREQVSSLQSRSKMGSMRPETERHMARMSILDEAEIVCATLAGAGHEMLYR--YTFDTVV 1392
Query: 489 IDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYP 548
IDEAAQAVE +TL+PL C + LVGDP QLP TV+S AE Y SLF R+ A P
Sbjct: 1393 IDEAAQAVELSTLIPLRYECTRCILVGDPKQLPPTVLSQEAERRQYAQSLFVRMFNAS-P 1451
Query: 549 --VKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEG 606
V +L QYRMHP++ FPS FY L DG + T + WH + FGPF FF +
Sbjct: 1452 DRVHLLSIQYRMHPDISLFPSTAFYGRQLIDGPQMASKTLQPWHNTQLFGPFRFFHVDAL 1511
Query: 607 KESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKET 666
+E P S S N E + ++ L + Q ++ +S Y+ QV + F
Sbjct: 1512 EE--PGRSHSIQNQSEAYTAMQVYEALCACA-QTSLRGRVGFVSMYKAQVDLLRTLFVSQ 1568
Query: 667 FGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILV 726
+G + VD ++VDG QG+EKD+ I SCVR++ + +GFL+D+RR+NV +TRA+S+++V
Sbjct: 1569 YGRAAAMDVDFSSVDGFQGQEKDIIILSCVRSNKDRVMGFLSDHRRLNVALTRARSNMIV 1628
Query: 727 VGCASTLREDKHWNNLVKSAEKQ 749
+G AS L D W +++ A +
Sbjct: 1629 IGNASMLGNDTIWRDMISEARSR 1651
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 52/102 (50%), Gaps = 14/102 (13%)
Query: 201 LKICSLSTIAREYLALRSVGSLPFKDLILSA-----SEKSSGSQDQSWKIPGLLHEYIKE 255
+K+ SL+T+ REY AL SV L +L A + S Q ++ ++ L
Sbjct: 1100 VKLFSLTTLRREYAALCSVPDLAMVQDVLHARVAPLPDVSVADQTKAMRMYEL------- 1152
Query: 256 NHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAIL 297
N Q A+ + F LIQGPPGTGKT+TI L+++ L
Sbjct: 1153 --NEPQARAVVATMRTPGFSLIQGPPGTGKTKTIRALVASFL 1192
>gi|242034805|ref|XP_002464797.1| hypothetical protein SORBIDRAFT_01g026860 [Sorghum bicolor]
gi|241918651|gb|EER91795.1| hypothetical protein SORBIDRAFT_01g026860 [Sorghum bicolor]
Length = 372
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 120/272 (44%), Positives = 161/272 (59%), Gaps = 8/272 (2%)
Query: 486 VVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRA 545
+V+IDEAAQA E L PLA G + LVGDP QLPATVIS A L Y SLF+R Q+A
Sbjct: 1 MVVIDEAAQASEVGVLPPLALGAARCVLVGDPQQLPATVISKAAGTLLYSRSLFERFQQA 60
Query: 546 GYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHE 605
G P +L QYRMHP++R FPS+ FY L D V ++ P+ F+D+
Sbjct: 61 GCPTILLSVQYRMHPQIREFPSKYFYQGRLTDSESVVQLPDEAYYRDALMAPYIFYDMSH 120
Query: 606 GKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSS----QLAIISPYRHQVKQFQE 661
G+ES GS S+ NI E F L L+ L LK++ + II+PY+ Q+K Q
Sbjct: 121 GRESHRGGSSSYQNIHEAQFALRLYEHLQKF---LKANGAKKVSVGIITPYKLQLKCLQR 177
Query: 662 RFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAK 721
FK+ E K + I TVD QG+E+DV I SCVRAS+ +GF+AD RRMNV +TRA+
Sbjct: 178 EFKDVMNTEEGKDIYINTVDAFQGQERDVIIMSCVRASN-HGVGFVADIRRMNVALTRAR 236
Query: 722 SSILVVGCASTLREDKHWNNLVKSAEKQDCLF 753
++ VVG A+ L + + W +L+ A+ + C
Sbjct: 237 RALWVVGNANALMQSEDWASLIADAKARKCFM 268
>gi|66826987|ref|XP_646848.1| DNA2/NAM7 helicase family protein [Dictyostelium discoideum AX4]
gi|60474984|gb|EAL72920.1| DNA2/NAM7 helicase family protein [Dictyostelium discoideum AX4]
Length = 2523
Score = 226 bits (576), Expect = 4e-56, Method: Composition-based stats.
Identities = 135/370 (36%), Positives = 212/370 (57%), Gaps = 33/370 (8%)
Query: 373 RVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQ 432
+ ++LVC PS++++DE+ R L + + + + Y P +VRIG + +++ D
Sbjct: 1639 KFKILVCGPSHASVDEVAKRCLKKSLVNIDGKPYLPNMVRIG-----KLQNISPDCHRIS 1693
Query: 433 KRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEA 492
D + A R AI+ A I+ +TLS SGS + + N ++V++DE+
Sbjct: 1694 LFDKTPAQ--------------RKAIIRNATIIFATLSASGSKPI-RSNFKANIVLVDES 1738
Query: 493 AQAVEPATLVPLATG-CKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKM 551
Q+ EPA+L+PL G +++ LVGDP+QLP T+ S + G SLF+RL + PV+M
Sbjct: 1739 TQSSEPASLIPLCIGNIEKLILVGDPLQLPPTIFSSESAKNGLNISLFERLSKV-LPVEM 1797
Query: 552 LKTQYRMHPEVRSFPSREFYDEALEDGSDVED--YTTRDWHEYRCFGPFSFFDIHEGKES 609
L TQYRMHP + FPS +FY + L DG +V+ Y ++H +GP F+D+ + KE
Sbjct: 1798 LNTQYRMHPTISRFPSNQFYKDRLLDGDNVKSLVYNQHNFHSDIKYGPIRFYDVIDSKEE 1857
Query: 610 QPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGV 669
+G S N E+ V L KL+ YP+ K S II+PY+ Q + +E+ K+
Sbjct: 1858 --SGKRSLKNKLEITMVFTLIKKLVQDYPECKKFS-FGIITPYKLQKSEIKEQHKQ---F 1911
Query: 670 ESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGC 729
++ +T+DG QG EKD+ I SCVR+ + IGFL+D RR+NV +TRAK + V+G
Sbjct: 1912 NYPLNIETSTIDGVQGSEKDIIILSCVRS---ERIGFLSDRRRINVALTRAKFGLFVIGN 1968
Query: 730 ASTLREDKHW 739
+ L++D+ W
Sbjct: 1969 SKLLKKDRTW 1978
Score = 60.1 bits (144), Expect = 4e-06, Method: Composition-based stats.
Identities = 67/280 (23%), Positives = 118/280 (42%), Gaps = 47/280 (16%)
Query: 51 LREVKDTYKDVDDYLATFEPLLFEEVKAQIIQKKDEEE---VQEWKLRLV----MECGEA 103
+ ++D+Y D +++ +PL+ EE +AQ+ +E E + E L+ ++ +
Sbjct: 1377 IHSLQDSYSDQSEFVNLMKPLIVEEYRAQLEGDFNEIEGVSISEQDGTLIGLDRVKMNDT 1436
Query: 104 DGFH--------LPSVTYE---ADEVESISPNDLLLLSKEEFKEGSTFPTTYAFALVEHC 152
H L ++ + DE+E I ND+LL F +H
Sbjct: 1437 PTIHSFRELSEDLVAIKFNIKVKDELEEIYLNDILL-----------------FKTFDHT 1479
Query: 153 QANLLRLRMYLAGEVIHINKDAVKSQRLLN------IHSLITSSVSAVEKR--LFSLKIC 204
+ L + + V+ K + + +L+ I + S+++ + L +K+
Sbjct: 1480 SKPMFALGLVTSNSVLKGKKQIIICEFVLSDSTKPLIEKFYSVSLNSKTSKDILHFIKVS 1539
Query: 205 SLSTIAREYLA---LRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIKENHNASQ 261
+ +T RE A ++ +L ++ + E + +IP LL + N SQ
Sbjct: 1540 NSTTFIRELEAPEIFKNSKTL-LNQILQPSLEVYNLMTSMRMEIPSLLRSMCIQELNTSQ 1598
Query: 262 LEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATP 301
A+ L K LIQGPPGTGKT TI LLS +L P
Sbjct: 1599 FSAVETSLSTKGITLIQGPPGTGKTTTIYYLLSILLAINP 1638
>gi|299472182|emb|CBN79685.1| Presumed helicase required for RNA polymerase II transcription
termination and processing of RNAs [Ectocarpus
siliculosus]
Length = 1201
Score = 226 bits (575), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 146/373 (39%), Positives = 194/373 (52%), Gaps = 74/373 (19%)
Query: 446 ATRKDRDSIRS-----AILNEAVIVCSTLSFSGSALL----SKLNHGFDVVIIDEAAQAV 496
A ++ RD++RS + +++VC+TLS GS + S GFD VI+DEA QA
Sbjct: 363 AKQRRRDALRSLEVERGKIRRSLVVCATLSGCGSGPMVEAVSLSGKGFDTVIVDEACQAT 422
Query: 497 EPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQY 556
EP+TL+PL+ GCK++ LVGDP QLPATVIS A L SLF+RL+RAGYPV ML QY
Sbjct: 423 EPSTLIPLSLGCKRLILVGDPRQLPATVISQRAARLNLEVSLFERLERAGYPVHMLTVQY 482
Query: 557 RMHPEVRSFPSREFYDEALEDGSDVEDY-----------TTRDWHEYRCFGPFSFFDIHE 605
RMHPE+R+FPS FY+ L D V D TT CF PF D+
Sbjct: 483 RMHPEIRAFPSARFYNGRLTDAPCVRDQAAIPAQSPSSETTALPPLGPCFPPFLLVDVSS 542
Query: 606 GKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSS--------------------- 644
G E + AGS S+ N E FV +L++ L+S
Sbjct: 543 GSERR-AGS-SYQNPREASFVSAFLARLVASG--LRSGRGVKAGGGGGDGTAAGGGQDRE 598
Query: 645 -----QLAIISPYRHQVKQFQERFK---------------ETFGVESQKVVDITTVDGCQ 684
++ +I+PYR QV Q+ E GV++ +++TVDG Q
Sbjct: 599 KSGVVRVGVITPYRGQVHCIQQELSGGGGGGGGRRLKGGVEDGGVDA----EVSTVDGFQ 654
Query: 685 GREKDVAIFSCVRASDK-----KSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHW 739
G+E DV +FSCVRA IGFLAD RRMNV +TRA+ S++V+G L D W
Sbjct: 655 GKEVDVVLFSCVRAPSSGGGGGGGIGFLADQRRMNVALTRARRSLVVLGNVGRLSSDGTW 714
Query: 740 NNLVKSAEKQDCL 752
LV ++ +D L
Sbjct: 715 KALVDHSKSRDRL 727
Score = 47.8 bits (112), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 41/64 (64%), Gaps = 5/64 (7%)
Query: 375 RVLVCAPSNSALDEIVLRLL--NTGIRDENIRSYTPKIVRIGLK---AHHSVNSVAIDHL 429
R+LVCAPSN A+DE+ RL + G+ D+ + P++VR+G A V +V+++ +
Sbjct: 231 RILVCAPSNGAVDELAQRLALESGGVWDQRGNAVAPRVVRLGKPSEDAADRVKAVSLEFM 290
Query: 430 VEQK 433
VE++
Sbjct: 291 VEER 294
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/24 (75%), Positives = 23/24 (95%)
Query: 274 FVLIQGPPGTGKTQTILGLLSAIL 297
VL+QGPPGTGKT+T+LG++SAIL
Sbjct: 159 VVLLQGPPGTGKTRTVLGVVSAIL 182
>gi|255083106|ref|XP_002504539.1| superfamily I helicase [Micromonas sp. RCC299]
gi|226519807|gb|ACO65797.1| superfamily I helicase [Micromonas sp. RCC299]
Length = 1155
Score = 224 bits (571), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 138/363 (38%), Positives = 203/363 (55%), Gaps = 20/363 (5%)
Query: 413 IGLKAHHSVNSVAIDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFS 472
+G AHH + ID V+++ D+Q+ A RK R ++ ++ +++A IV +TL+ S
Sbjct: 665 LGPNAHHVTRNQRIDGKVDRQ---MKYDQQR--AIRKVRAALEASFVDDAEIVFTTLTSS 719
Query: 473 GSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHL 532
+ +L HGFD V+IDEAAQA E ATL+P G ++ LVGDP QLP+TVIS A+ +
Sbjct: 720 SRKVFRQLTHGFDTVLIDEAAQANEMATLIPFLHGARRCVLVGDPQQLPSTVISKHAQQV 779
Query: 533 GYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEY 592
+ SLF+R G +L QYRMHPE+R FPS EFY+ L D + V + +
Sbjct: 780 SFQRSLFERFNELGAEALLLSVQYRMHPEIREFPSEEFYEGRLMDSACVIKRRPEPYQQK 839
Query: 593 RC-FGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSS---QLAI 648
G + FD H +E S S IN E V+ L+ K+ + S ++++
Sbjct: 840 ESGLGTYRIFDAHGLEER--TTSNSVINHFEAILVVCLYKKIDKVLRDGTGESAEGKVSV 897
Query: 649 ISPYRHQVKQFQERFKETFGVE---SQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIG 705
++PY+ QV ++ F++ G E S+ V I T+DG QG+E DV IFS VR S IG
Sbjct: 898 VTPYKEQVTVIRKAFEQLCGGEGAASRLRVQINTIDGYQGQESDVIIFSTVRGSGDGGIG 957
Query: 706 FLADYRRMNVGITRAKSSILVVGCASTLR------EDKHWNNLVKSAEKQDCLFRVSKPY 759
FL+D RR+NV ITRAK ++ +VG LR E W +LV++A + C+ + P
Sbjct: 958 FLSDIRRLNVAITRAKKALYIVGRVGKLRAAQAGGEFTVWRDLVQNAMDRGCIVDDADPR 1017
Query: 760 ASF 762
+F
Sbjct: 1018 VTF 1020
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 81/189 (42%), Gaps = 19/189 (10%)
Query: 274 FVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLREIKRGPELPMHEKYN------- 326
F L+QGPPGTGKTQT+ G+L+ LH + + K I RG ++
Sbjct: 392 FTLVQGPPGTGKTQTVWGILNT-LHCLLFQRYYKSIHDAIARGTSRATGTEFTAALDDDD 450
Query: 327 -HWGRASPWLVGANPRDNIMPIDGDDGFF---PTTGNELKPEVVNSSRRYRVRVLVCAPS 382
W R++ + + D + TTG E + Y+ R+LVCAPS
Sbjct: 451 AEWLRSAREDGEEDEDKDGGGFTVRDLYTFLRDTTGVERG----QTYGVYKPRILVCAPS 506
Query: 383 NSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLK---AHHSVNSVAIDHLVEQKRDDSAA 439
N+A+D ++ R++ YTP +VR+ +V V LVE + +
Sbjct: 507 NAAVDNLLERVITKRFHQLTGELYTPAVVRVTASETVVSDAVGPVTTSRLVEDLIEMGKS 566
Query: 440 DKQKHGATR 448
D +K R
Sbjct: 567 DGKKFDGAR 575
>gi|320589505|gb|EFX01966.1| tRNA-splicing [Grosmannia clavigera kw1407]
Length = 2062
Score = 223 bits (568), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 127/334 (38%), Positives = 186/334 (55%), Gaps = 33/334 (9%)
Query: 431 EQKRDDSAADKQKHGA------TRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGF 484
EQ+R + ++ K T R I+ ILNEA ++C+TLS SG + LN F
Sbjct: 1507 EQRRIGAQIERDKESGNTYARETEIKRRQIQQKILNEAHVLCATLSGSGHDIFKNLNVEF 1566
Query: 485 DVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQR 544
+ V+IDEAAQ VE + L+PL GC + LVGDP QLP TV+S A GY SLF R+QR
Sbjct: 1567 ETVVIDEAAQCVELSALIPLKYGCAKCILVGDPKQLPPTVLSQSAARYGYDQSLFVRMQR 1626
Query: 545 AGYP--VKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFD 602
P V +L TQYRMHP++ FPSR+FY+ L DG+D+ + WH GP+ FFD
Sbjct: 1627 -NRPQDVHLLDTQYRMHPDISRFPSRQFYEGRLIDGADMARLRAQPWHANPLLGPYRFFD 1685
Query: 603 IHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMY---PQL------KSSSQLAIISPYR 653
+ +E G S +N +EV L L+ + ++Y PQ ++ ++ II+PY+
Sbjct: 1686 VSGAQEKGHRGR-SLVNENEVGVALQLYRRFRAVYGSGPQTSRGDDDEAGPKIGIITPYK 1744
Query: 654 HQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRM 713
Q++ + RF FG + + V+ T D QGRE D+ IFS +
Sbjct: 1745 AQLQALRSRFSSQFGDDILQAVEFNTTDAFQGRECDIIIFS--------------HPPHL 1790
Query: 714 NVGITRAKSSILVVGCASTLREDKHWNNLVKSAE 747
NVG+TRA+SS+ ++G + LR+ + W+ L++ A+
Sbjct: 1791 NVGLTRARSSLWILGDSRALRQGEFWHALIEDAK 1824
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 106/421 (25%), Positives = 167/421 (39%), Gaps = 90/421 (21%)
Query: 16 RFCKIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEE 75
R + IL WD F E ND S V D Y +Y TF PLL E
Sbjct: 1095 RLHQAILEWDIF------HEGNDPPSDGFQ-----CVAVADDYMSPAEYKKTFFPLLINE 1143
Query: 76 VKAQIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADEVESI-SPNDLLLLSKEEF 134
+ K+E + + +++V + + ++ A E + D++LLS+
Sbjct: 1144 AWRSFVTAKEESTAKAFGVKVVTRISVDNFLEVSTLMPAAANRERLLGEGDIVLLSR--- 1200
Query: 135 KEGSTFPTTYAFALVEHCQANLLRLRMYLAG-EVIHINKDAVKSQRLLNIHSLITSSVSA 193
G+ T+ HC A + +L M EV + + S+R L + L+ +
Sbjct: 1201 --GADPLTSRG---EPHCLARVWKLAMKRENCEVTY----RLNSRRNLILPVLLPGA--- 1248
Query: 194 VEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYI 253
++KI +++TI REY AL S+ D +L A+ + G + E
Sbjct: 1249 ---EFRAVKITNMTTIEREYAALESLQYYDLMDEVLKAAPSPMLTFGD-----GAVAEVQ 1300
Query: 254 KENH-NASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLRE 312
+ N Q AI G F L+QGPPGTGKT+TI+ ++ A+L T + +
Sbjct: 1301 RTYELNRGQAVAILHGKANDGFTLVQGPPGTGKTKTIVAMVGALLTGT---IKTNAAAVA 1357
Query: 313 IKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNSSRRY 372
+ R G +G +T +L
Sbjct: 1358 VSR--------------------------------PGANGHGDSTTKKL----------- 1374
Query: 373 RVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKA--HHSVNSVAIDHLV 430
LVCAPSN+A+DE+VLR L G+R+ +VR+G + V V ++ LV
Sbjct: 1375 ----LVCAPSNAAVDELVLR-LKMGVRETTGALRKINVVRLGRSEAINSGVKDVTLEELV 1429
Query: 431 E 431
+
Sbjct: 1430 K 1430
>gi|124087769|ref|XP_001346867.1| TRNA-splicing endonuclease positive effector [Paramecium
tetraurelia strain d4-2]
gi|145474903|ref|XP_001423474.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|50057256|emb|CAH03240.1| TRNA-splicing endonuclease positive effector, putative [Paramecium
tetraurelia]
gi|124390534|emb|CAK56076.1| unnamed protein product [Paramecium tetraurelia]
Length = 1124
Score = 222 bits (565), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 143/432 (33%), Positives = 217/432 (50%), Gaps = 75/432 (17%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIG-------------------- 414
++L+CAPSN+A+DEI+ R+L G+ D RS T K+VR+G
Sbjct: 554 KILICAPSNAAIDEIIFRILQGGLFDCEGRSRTVKLVRLGVLDEENDKSVIIKQVSLEDV 613
Query: 415 ----------------------LKAHHSVNSVAIDHLVEQKRDDSAADKQ------KHGA 446
L+ S + AI + E ++ D KQ K
Sbjct: 614 AQYQLFNKSSFKANSDQKTTGELRIELSKTTQAIKKIKEMEKYDEQQKKQLNELWNKRNQ 673
Query: 447 TRKDRDSIRS--------------AILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEA 492
+ + +R+ I++EA I+CSTLS +G+ LSK F+++I+DEA
Sbjct: 674 LMQYLEQVRTNKRNQKENYVLFCEKIISEAEILCSTLSTAGTDKLSKFIDSFELLIVDEA 733
Query: 493 AQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKML 552
AQ EP+ +PL G +++ L+GDP QLPAT S V++ Y SLF+R+ + L
Sbjct: 734 AQCTEPSNNIPLRLGMRKMILIGDPKQLPATTFSSVSQITHYNRSLFERILDNDFKPFFL 793
Query: 553 KTQYRMHPEVRSFPSREFYDEALEDGSDV-EDYTTRDWHEYRCFGPFSFFDIHEGKESQP 611
QYRMHP++R FPS FYD L D V E ++ R F D+ E +E++
Sbjct: 794 DMQYRMHPQIREFPSLNFYDNKLIDHFSVYERLIPNNFFNQRVL----FIDV-ESEETK- 847
Query: 612 AGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVES 671
S+ N E + ++ + + + YP S L +I Y+ QV+ + K G +
Sbjct: 848 -DEKSFQNQTECNMIVEVLKNIKNAYP----SQSLGVICAYKAQVRLIKLEIKRQLG-DL 901
Query: 672 QKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCAS 731
+ I TVD QG+E+DV +FSCVR+S +IGFL D RR+NV +TRAK+++ + G A
Sbjct: 902 MDEIQINTVDSFQGQERDVILFSCVRSSSSGNIGFLQDGRRVNVALTRAKNALFIFGNAI 961
Query: 732 TLREDKHWNNLV 743
TL + + W NL+
Sbjct: 962 TLGQCQLWKNLL 973
>gi|308800562|ref|XP_003075062.1| Sen1 Sen1-related helicase (IC) [Ostreococcus tauri]
gi|119358871|emb|CAL52334.2| Sen1 Sen1-related helicase (IC) [Ostreococcus tauri]
Length = 799
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 123/305 (40%), Positives = 177/305 (58%), Gaps = 6/305 (1%)
Query: 448 RKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATG 507
R+ D + ++ ++EA IVC TL+ + F +I+DEA QA+EPATL+PL
Sbjct: 472 REISDDLAASFVDEAEIVCCTLTSLSKRFFRINSRPFKTIIVDEACQAIEPATLIPLTIY 531
Query: 508 CKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPS 567
LVGDP QLPATV S VA+ Y SLF+RL AG P K+L QYRMHPE+R FPS
Sbjct: 532 NAHCVLVGDPQQLPATVKSRVAKTARYDRSLFERLMEAGVPAKLLSIQYRMHPEIRCFPS 591
Query: 568 REFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVL 627
FY AL D ++ H+Y F PF FD+ +G+E + A + S N +E F++
Sbjct: 592 CVFYSGALVDAPKLDQSRYLPAHKYWPFKPFMVFDVVQGQEER-ASTLSRYNKNEAVFIV 650
Query: 628 LLFHKLISMYP-QLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGR 686
L + ++++P KS + ++S YR Q ++T V V+++T+D QG+
Sbjct: 651 DLLVRYLTLFPLTRKSRLDIMVLSGYREQCTLVHRLLQQTSIV---NCVNVSTIDAFQGQ 707
Query: 687 EKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSA 746
E DV + SCVR S IGFLAD RR+NV ITRA+ S+ V+ T+ + W L+K+A
Sbjct: 708 ESDVIVLSCVRTS-ATDIGFLADLRRLNVAITRARCSLWVICKCETVSKFHIWQLLLKNA 766
Query: 747 EKQDC 751
+++ C
Sbjct: 767 KERGC 771
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 80/185 (43%), Gaps = 47/185 (25%)
Query: 274 FVLIQGPPGTGKTQTILGLLSAILHATPARVH--SKGGLREIKRGPELPMHEKYNHWGRA 331
F LIQGPPGTGKT+ I L +A LH + + S L + + P ++
Sbjct: 265 FSLIQGPPGTGKTKVITSLANA-LHLLQFQYYFDSITALISRQSKAQAPSMKR------- 316
Query: 332 SPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNSSRRYRVRVLVCAPSNSALDEIVL 391
R + +D LKP R+L+CAPSN+A+D ++
Sbjct: 317 --------KRTMVHAVDT---------QTLKP-----------RILICAPSNAAVDNVLD 348
Query: 392 RLLNTGIRDENIRSYTPKIVRI---GLKAHHSVNSVAIDH----LVEQKRDDSAA--DKQ 442
R+++ + Y+P ++R+ + +V+I+H LVE DD +A +Q
Sbjct: 349 RIIHNRFLQMDASQYSPDVMRLVSGEANVSMTAQAVSIEHRVKSLVEMSADDWSAWYSRQ 408
Query: 443 KHGAT 447
H T
Sbjct: 409 YHTFT 413
>gi|145494398|ref|XP_001433193.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124400310|emb|CAK65796.1| unnamed protein product [Paramecium tetraurelia]
Length = 1493
Score = 218 bits (556), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 145/451 (32%), Positives = 215/451 (47%), Gaps = 86/451 (19%)
Query: 373 RVRVLVCAPSNSALDEIVLR------------------LLNTGIRDE-NIRSYTPKIVRI 413
R ++L+CAPSN+A+DEI+LR L+ G+ DE N+ S K V +
Sbjct: 872 RKKILICAPSNAAIDEIILRILQKGGLFDSQGNSRQANLIRIGLLDEENVHSDIIKKVSL 931
Query: 414 GLKAHHSVNSVAIDHLVEQKRDDSAADKQ------------------KHGATRKDRDSIR 455
A H + + Q+ + AD + +HG ++R I+
Sbjct: 932 EDLAQHKL--FSTQKFNAQQDQKTTADLRIELCQIQNHIKKLEKKLNQHGIPGEERRIIK 989
Query: 456 SAI-----------------------------------LNEAVIVCSTLSFSGSALLSKL 480
I LN+A I+CSTLS SGS LSK
Sbjct: 990 EQINQFSDLRKSKQEYLDKTRENKKMYKEYYNQFCEKLLNDAEIICSTLSSSGSDKLSKY 1049
Query: 481 NHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFK 540
+++I+DEAAQ EP+ ++PL G +++ L+GDP QLPAT SPV+ Y SLF+
Sbjct: 1050 LDQIELLIVDEAAQCTEPSNIIPLRLGIQKMILIGDPKQLPATTFSPVSNQTLYNRSLFE 1109
Query: 541 RLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSF 600
R+ + L QYRMH E+R FPS FY L+D E RD F
Sbjct: 1110 RILDNNFQPYFLDIQYRMHSEIRMFPSEYFYQNKLKDH---ESTNNRDLPTNFFKNRVLF 1166
Query: 601 FDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQ 660
DI +G+E + S IN E ++ + +P + + +I Y+ QV+ +
Sbjct: 1167 LDILDGQEQKDGTSN--INEQEASIIVNSIKCIKEEFP----TQTIGVICAYKSQVRYIK 1220
Query: 661 ERFKETFGVES---QKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGI 717
K+ + ES + I TVD QG+EKD+ +FSCVR+S IGFL D RRMNV +
Sbjct: 1221 TLLKQKYSDESLFDHSTISINTVDSFQGQEKDIILFSCVRSSQTGGIGFLNDGRRMNVAL 1280
Query: 718 TRAKSSILVVGCASTLREDKHWNNLVKSAEK 748
TRAK+++ ++G A TL + W +++K+ +K
Sbjct: 1281 TRAKNALFILGNAITLSKSDLWKSMLKNIQK 1311
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 31/43 (72%), Gaps = 1/43 (2%)
Query: 255 ENHNASQLEAIHEGLLR-KAFVLIQGPPGTGKTQTILGLLSAI 296
+ +N +Q +I E +L+ K L+QGPPGTGKT T++GLLS +
Sbjct: 818 QKYNETQANSIKEIILKEKGICLLQGPPGTGKTHTLIGLLSGV 860
>gi|145349529|ref|XP_001419184.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579415|gb|ABO97477.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 479
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 145/401 (36%), Positives = 207/401 (51%), Gaps = 39/401 (9%)
Query: 371 RYRVRVLVCAP-SNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHL 429
R R ++C SN A+D +V L G+R I P+ VR L + + ID
Sbjct: 4 RCRTSPILCTSDSNIAVDNLVDGLARAGVRVARIGR--PEAVRQDLMPYMIESIAGIDQ- 60
Query: 430 VEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVII 489
D KQ+ R +I +A L +A ++C+T + +GS +L K + F +I
Sbjct: 61 ------DCRWSKQQQ------RSAITNA-LRQAEVICATCAGAGSDILEK--YSFQACLI 105
Query: 490 DEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPV 549
DEA QA EPAT++PL GCKQV L+GD QLP T+IS AE G G SLF+R RAG
Sbjct: 106 DEATQATEPATVIPLTKGCKQVVLIGDQNQLPPTIISREAEAAGLGESLFERFIRAGIRT 165
Query: 550 KMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR---DWHEYRCFGPFSFFDIHEG 606
MLK QYRMHP + FPS+ FY L G+ DW P +F ++ EG
Sbjct: 166 YMLKVQYRMHPAIALFPSKTFYKGELLSGTPPSQRRAPVGFDWPVPAV--PMAFVNVEEG 223
Query: 607 KESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQE----- 661
E S + N E+ V+ + KL + L + +++PY Q + ++
Sbjct: 224 AERSDGSSQT--NPAEIQRVVNIVKKLAGQHEVLPGD--IGVVTPYSAQARAIKKILRGN 279
Query: 662 -----RFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVG 716
RF S K V++ TVDG QGREK+V +FSC RA+ ++GFLAD RR+NV
Sbjct: 280 APERTRFDAPADPTSMKAVEVATVDGFQGREKEVIVFSCTRANMNGNVGFLADTRRVNVM 339
Query: 717 ITRAKSSILVVGCASTLREDK-HWNNLVKSAEKQDCLFRVS 756
+TRAK +++VG TL++D+ W +K A + + +S
Sbjct: 340 LTRAKRGLIIVGHMKTLQQDEIVWKGWLKWARESGLICGLS 380
>gi|326482463|gb|EGE06473.1| tRNA-splicing endonuclease [Trichophyton equinum CBS 127.97]
Length = 2010
Score = 215 bits (548), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 221/802 (27%), Positives = 345/802 (43%), Gaps = 139/802 (17%)
Query: 19 KIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKA 78
K +L WD+F + G+ V + + + +Y TFEPLL E
Sbjct: 981 KTLLSWDFFATT----------VLPPNCGRTDYTLVSNVFANALEYQKTFEPLLILEAWQ 1030
Query: 79 QIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADEVE--SISPNDLLLLSKEEFKE 136
+++ +E+++++ D F S E +V+ + DL+LLS+
Sbjct: 1031 GFQTAREDATFKEFEIKVANRLS-VDSFVEVSTIMEPQQVKDLGLGEADLVLLSR----- 1084
Query: 137 GSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSAVEK 196
S P T + A HC + I K V+ +N + +S
Sbjct: 1085 -SNKPATDSGA--PHCLGRI---------SGIKKKKGTVEVSYRINPSGQM-ASGIGPGG 1131
Query: 197 RLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIKEN 256
LF +KI SL+ + REY AL ++ + I+ A + S + +L Y +
Sbjct: 1132 GLFGVKITSLTPLEREYGALMALQYYDLSEEIIRA-KPSPILNYGPESLKSILATY---D 1187
Query: 257 HNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLREIKRG 316
N +Q +AI + AF LIQGPPG+GKT+TI+ ++ A+L TP + +I
Sbjct: 1188 LNPAQAKAIKSAVDNDAFTLIQGPPGSGKTKTIVAIVGALL--TPILAERRVSQPKITSD 1245
Query: 317 PELPMHEKYNHWGRASPWLVGA--NPRDNIMPIDGDDGFFPTTGNELKPEVVNSSRRYRV 374
+ N G + LV A N + + + +G G V+ R +
Sbjct: 1246 -----SAQANKSGPSKKLLVCAPSNAAVDELVMRFKEGVKTLNGKTQPISVIRLGRSDAI 1300
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDEN-----IRSY-------TPKIVRIGLKAHHSVN 422
V + LDE+V LN + +N ++SY + K + I +
Sbjct: 1301 NANVL---DVTLDELVNAKLNQSGQTKNGEERDLQSYFNEHKETSAKFIEIRQRIDQCRA 1357
Query: 423 SV-AIDHLVEQKRD-------------DSAADKQKHGATRK---DRDSIRSAILNEAVIV 465
V + + +E++ D D+A DK H A R R I+ ++ A ++
Sbjct: 1358 RVEPVSNELEREFDLLKRKKAQLSQAIDNARDKN-HAAARNAELTRRRIQQETIDGAHVI 1416
Query: 466 CSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVI 525
CSTLS SG + L+ F+ VIIDEAAQ++E + L+PL
Sbjct: 1417 CSTLSGSGHEMFQSLSIEFETVIIDEAAQSIELSALIPLK-------------------- 1456
Query: 526 SPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYT 585
YG S FPS+ FYD L+DG +
Sbjct: 1457 --------YGCS-------------------------NKFPSQAFYDGKLQDGPGMAPLR 1483
Query: 586 TRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQ 645
+ WH GP+ FFD+ +G S A S INI E+ + L+ +L++ Y + +
Sbjct: 1484 KKPWHGSELLGPYRFFDV-QGMHSSAAKGHSLINIAELTVAMRLYERLLADYRNYDFAGK 1542
Query: 646 LAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIG 705
+ II+PY+ Q+++ + RF +G V+ T D QGRE +V IFSCVRASD + IG
Sbjct: 1543 IGIITPYKGQLRELKSRFAAKYGSSIFTTVEFNTTDAFQGRECEVIIFSCVRASD-RGIG 1601
Query: 706 FLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSA-EKQ-----DCLFRVSKPY 759
FL+D RRMNVG+TRAKSS+ V+G + +L + W L+ A E+Q D L + KP
Sbjct: 1602 FLSDIRRMNVGLTRAKSSLWVLGNSQSLVRGEFWRALIHDARERQLYTEGDILRILQKPQ 1661
Query: 760 ASF-FSDENLESMRKNATTDNV 780
S N+E + A N+
Sbjct: 1662 ISLDMELNNVEMVDAPAEVGNI 1683
>gi|224010575|ref|XP_002294245.1| hypothetical protein THAPSDRAFT_264317 [Thalassiosira pseudonana
CCMP1335]
gi|220970262|gb|EED88600.1| hypothetical protein THAPSDRAFT_264317 [Thalassiosira pseudonana
CCMP1335]
Length = 608
Score = 215 bits (547), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 174/604 (28%), Positives = 273/604 (45%), Gaps = 78/604 (12%)
Query: 274 FVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLREIKRGPELPMHEKYNHWGRAS- 332
F LI+GPPGTGK+ T++ +L+A LH + + R + +E+ +AS
Sbjct: 1 FTLIKGPPGTGKSTTLVSVLNA-LHLRQYQEYYTAIERIVTESDASTYYEELAALNKASE 59
Query: 333 --PWLVGANPR----DNIMPIDGDDGFFPTTGNELKPEVVNSS--------RRYRVRVLV 378
P ++ P DN++ D F G + P +V + ++ ++ V
Sbjct: 60 VKPRILVCAPSNSAIDNVVMKIMTDRFVDGNGAKYSPSIVRAGVGIVNPAVKKVGLKQTV 119
Query: 379 CAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNS----------VAIDH 428
A +S D + L L T R + R T +I ++ + H + S V ID
Sbjct: 120 DAIISSGTDVVKLDALITTGRKQLKRMQT-EIQKLKARVHALLESCPYPICEDWEVRIDE 178
Query: 429 -------------------------LVEQKRDDS-----------AADKQKHGATRKDRD 452
VE+ +++ AA+ ++ G +
Sbjct: 179 ASPHEKPIQIKRMPHYIALLKNLTKYVERHNNETLTLEKYIILQNAANTRREGGGIEPSS 238
Query: 453 SI----RSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGC 508
S+ + +LN I+ +TL +G + + F V++IDEAAQ+ EP+TLV L G
Sbjct: 239 SLVHELETHVLNSNHIILTTLGSAGGRSIEAASK-FKVIVIDEAAQSAEPSTLVALQLGS 297
Query: 509 KQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSR 568
LVGDP QLPAT+ S Y SLF+RL+ +PV ML TQYRMHP + FP
Sbjct: 298 SHAILVGDPQQLPATIFSVSGRSTKYDRSLFQRLEECRHPVMMLNTQYRMHPIISEFPRH 357
Query: 569 EFYDEALEDGSDVED------YTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDE 622
FY+ L DG +V+ T ++ PF+ FD+ + KE + S S N +E
Sbjct: 358 IFYEGMLLDGPNVQKPDFGGTLKTAIVGKFPHIKPFNIFDL-DSKEERDGTSLS--NTNE 414
Query: 623 VDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDG 682
L L+ L L + S++A+I+PY Q F+E FG V+I+TVD
Sbjct: 415 AQLALHLYCALDRETNGLLAKSRVAVITPYSQQTALLHRLFEEQFGNAYSSRVEISTVDA 474
Query: 683 CQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNL 742
QGRE + I+SCVRA+ K IGFL+D +RMNV +TRAK + V+ ++ + +W NL
Sbjct: 475 FQGREAGLVIYSCVRAAGSKGIGFLSDVQRMNVALTRAKYFLFVIARCRSIMVNPYWRNL 534
Query: 743 VKSAEKQDCLFRVSKPYASFFSDENLESMRKNATTDNVQGADGHVPHDDETMHYANTGDA 802
V A ++ + V + +++ N G G + D + + G +
Sbjct: 535 VGYAREKSAIIAVPMDRRNSNKGNQFPDLKRLTPLHNT-GGSGDISDDTSVVGSVSFGKS 593
Query: 803 DQGQ 806
G+
Sbjct: 594 SDGR 597
>gi|363740551|ref|XP_415453.3| PREDICTED: probable helicase senataxin [Gallus gallus]
Length = 2713
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 157/461 (34%), Positives = 221/461 (47%), Gaps = 91/461 (19%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTP-------KIVRIGLKAHHSVNSVA-- 425
R LVCAPSN+A+DE++ +++ +++ P K+VR+G A S+NS
Sbjct: 2022 RFLVCAPSNAAIDELMKKII-IAFKEKCQNRQEPLGNCGDIKLVRLG--AERSINSEVRA 2078
Query: 426 ------IDHLVEQKRDDSAADKQKHGAT-------------------------------- 447
++H +++K D D QK A
Sbjct: 2079 FSLDKQVEHRMKRKPTDRDQDIQKKKAALDEKLDMLSRQRAMHRCEKRESQMLDDEIGRL 2138
Query: 448 --------------RKDRDSIRSAILNEAVIVCSTLSFSGSALLSKL--NHGFD---VVI 488
R +++ I+ E+ I+C TLS SG LL G D VI
Sbjct: 2139 SKERQQLASQLKEVRGHSQKVQTDIILESDIICCTLSTSGGGLLESAFWRQGLDPFSCVI 2198
Query: 489 IDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQR---- 544
+DEA Q+ E TL+PL C ++ LVGDP QLP T+ S A+ GYG SL RLQR
Sbjct: 2199 VDEAGQSCEVETLIPLIHRCNKLVLVGDPRQLPPTIKSIKAQEYGYGQSLMARLQRHLEE 2258
Query: 545 -------AGYPVKMLKTQYRMHPEVRSFPSREFYDEALE-DGSDVEDYTTRDWHEYRCFG 596
PV L QYRMHP++ FPS YD+ L+ D + E+ + +W F
Sbjct: 2259 QVQNNLLRRLPVVQLTVQYRMHPDICLFPSSYIYDKTLKTDKATEENRCSSEWP----FQ 2314
Query: 597 PFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQV 656
P+ FD+ +G E + S S N EV VL + + L ++ II+PY Q
Sbjct: 2315 PYLVFDVGDGHEERDKDSFS--NPQEVKLVLEIIRTIKEKRKDL-GLRRIGIITPYSAQK 2371
Query: 657 KQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRA-SDKKSIGFLADYRRMNV 715
K+ QE F S VD TVD QGREKD I +CVRA S K SIGFLA +R+NV
Sbjct: 2372 KKIQEELDRVFKNNSPGEVD--TVDAFQGREKDCIIVTCVRANSSKGSIGFLASLQRLNV 2429
Query: 716 GITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRVS 756
ITRA+ S+ ++G TL E+K WN L++ A+++ + + S
Sbjct: 2430 TITRARFSLFILGRLKTLMENKDWNKLIQDAQRRGAIIKTS 2470
Score = 42.4 bits (98), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 24/32 (75%), Gaps = 2/32 (6%)
Query: 266 HEGLLRKAFVLIQGPPGTGKTQTILGLLSAIL 297
H GL + LI GPPGTGK++TI+GLLS +L
Sbjct: 1973 HPGLAK--ICLIHGPPGTGKSKTIVGLLSRVL 2002
>gi|326930440|ref|XP_003211355.1| PREDICTED: probable helicase senataxin-like [Meleagris gallopavo]
Length = 2717
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 156/468 (33%), Positives = 224/468 (47%), Gaps = 91/468 (19%)
Query: 368 SSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTP-------KIVRIGLKAHHS 420
++R + R LVCAPSN+A+DE++ +++ +++ P K+VR+G A S
Sbjct: 2027 NARMKQSRFLVCAPSNAAVDELMKKII-IAFKEKCQNKQEPLGNCGDIKLVRLG--AERS 2083
Query: 421 VNSVA--------IDHLVEQKRDDSAADKQKHGAT------------------------- 447
+NS ++H +++K D D QK A
Sbjct: 2084 INSEVRAFSLDKQVEHRMKRKPTDRDQDIQKKKAALDEKLDMLSRQRAMHRCEKRESQML 2143
Query: 448 ---------------------RKDRDSIRSAILNEAVIVCSTLSFSGSALLSKL--NHGF 484
R +++ I+ E+ I+C TLS SG LL G
Sbjct: 2144 DDEIGRLSKERQQLASQLKEVRGHSQKVQTDIILESDIICCTLSTSGGGLLESAFWRQGL 2203
Query: 485 D---VVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKR 541
D VI+DEA Q+ E TL+PL C ++ LVGDP QLP T+ S A+ GYG SL R
Sbjct: 2204 DPFSCVIVDEAGQSCEVETLIPLIHRCNKLVLVGDPRQLPPTIKSIKAQEYGYGQSLMAR 2263
Query: 542 LQR-----------AGYPVKMLKTQYRMHPEVRSFPSREFYDEALE-DGSDVEDYTTRDW 589
LQR PV L QYRMHP++ FPS Y L+ D + E+ + +W
Sbjct: 2264 LQRHLEDQVQNNLLRRLPVVQLTVQYRMHPDICLFPSSYVYGRTLKTDKATEENRCSSEW 2323
Query: 590 HEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAII 649
F P+ FD+ +G+E + S+ N EV VL + + L ++ II
Sbjct: 2324 P----FQPYLVFDVGDGREER--DKDSFSNPQEVKLVLEIIRTIKEKRKDL-GLRRIGII 2376
Query: 650 SPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRA-SDKKSIGFLA 708
+PY Q K+ QE F S VD TVD QGREKD I +CVRA S K SIGFLA
Sbjct: 2377 TPYSAQKKKIQEELDRVFKNNSPGEVD--TVDAFQGREKDCIIVTCVRANSSKGSIGFLA 2434
Query: 709 DYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRVS 756
+R+NV ITRA+ S+ ++G TL E+K WN L++ A+++ + + S
Sbjct: 2435 SLQRLNVTITRARFSLFILGRLKTLMENKDWNELIQDAQRRGAIIKTS 2482
Score = 42.7 bits (99), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 24/32 (75%), Gaps = 2/32 (6%)
Query: 266 HEGLLRKAFVLIQGPPGTGKTQTILGLLSAIL 297
H GL + LI GPPGTGK++TI+GLLS +L
Sbjct: 1985 HPGLAK--ICLIHGPPGTGKSKTIVGLLSRVL 2014
>gi|219113369|ref|XP_002186268.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209583118|gb|ACI65738.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 1189
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 118/314 (37%), Positives = 172/314 (54%), Gaps = 16/314 (5%)
Query: 451 RDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQ 510
R ++ + +LN +V +TL +G+ ++ + F+VV++DEAAQ+VEPATL G +
Sbjct: 807 RQNMETHVLNSVHMVMTTLGTAGNRVMEAADK-FEVVVVDEAAQSVEPATLSAFQLGSRH 865
Query: 511 VFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREF 570
LVGDP QLPATV + Y SLF+RL+ AG PV ML QYRMHP + FP F
Sbjct: 866 AVLVGDPQQLPATVFNISGRLSKYDRSLFQRLEEAGQPVYMLNEQYRMHPSISHFPRHIF 925
Query: 571 YDEALEDGSDVE--DY-------TTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINID 621
Y L DG +V DY TR F P D+ +E G S N
Sbjct: 926 YGGTLLDGPNVRKSDYGNPLLGMVTRTLP---SFSPLMILDLDSKEER---GGTSLSNSG 979
Query: 622 EVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVD 681
E + L+ +L + L + +++A+I+PY Q + +E F + G +K V++ TVD
Sbjct: 980 EAQLAVYLYMRLKGISRGLSAETKVAVITPYAQQARMLREYFGDALGPNYEKFVEVNTVD 1039
Query: 682 GCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNN 741
QGRE ++ IFS VRA+ IGFL+D RRMNV +TRAK + V+ ++ + +W++
Sbjct: 1040 AFQGREANIVIFSAVRAAGSHGIGFLSDVRRMNVALTRAKHFLFVIARCDSIVVNPYWSD 1099
Query: 742 LVKSAEKQDCLFRV 755
LV A K + +V
Sbjct: 1100 LVTHARKTHAVLKV 1113
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 113/482 (23%), Positives = 195/482 (40%), Gaps = 119/482 (24%)
Query: 17 FCKIILGWD----YFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLL 72
F K + WD Y + +++ D N + K + + + + + Y+A + PL
Sbjct: 237 FWKHLREWDFVSQYASYQRSQRQQLDTNDQSTTMQK---KPLPNVFLNARHYMAAWAPLC 293
Query: 73 FEEVKAQIIQKKDEEEVQEWKLRLVMEC-------GEADGFHLPSVTYEADEVESIS--- 122
E +AQ++Q+ +++ G D F+ S E D ++
Sbjct: 294 LAECRAQLLQEAGLNASAPLAVQVQTSTNGPRRFRGTGDMFNASSGWDEHDTGGYVTIQP 353
Query: 123 ------------PNDLLLLSKEEFK-------------------EGSTFPTTYA-FALVE 150
P+DL+LL ++ + P Y L+
Sbjct: 354 QQRGTGRGMKFFPHDLVLLLIPPYEHILRDLSQSRKTPPAPPLGQDPNDPAAYKDVGLIG 413
Query: 151 HCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSAVEKRLFSLKICSLSTIA 210
H + + R +AG + I+K N + +S+ S +F +KI S T
Sbjct: 414 HVEMS----RGEVAGLTLKISKRLWAKLSTRNGSAPRSSNASPTTTNMFLVKIGSNVTAL 469
Query: 211 REYLALRSVGSLPFKDLILS-----ASEKSSGSQDQSWKI------------PGLLHEYI 253
RE+ AL V +LP + +L+ A + S++Q+ + G L +Y
Sbjct: 470 REFTALCQVDTLPVQRYLLAEHLANAQNRRKLSRNQTTEQLLERMGGANALGKGFL-DYA 528
Query: 254 KENHNASQLEAI----HEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGG 309
+ NASQL AI HE F LI+GPPGTGKT T++ +L++ LH
Sbjct: 529 EHKFNASQLTAIAASAHE-YGEGGFTLIKGPPGTGKTTTLVAVLNS-LH----------- 575
Query: 310 LREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNSS 369
+R+ + KY R + P TG + ++ +
Sbjct: 576 IRQ---------YNKYYESVRR----IATQP----------------TGT--RQAALDMA 604
Query: 370 RRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHL 429
RR + R+LVCAPSN+A+D I+L+++ G D + Y P ++R+G+ +V VA++
Sbjct: 605 RRAKPRLLVCAPSNAAVDNIILKIMEDGFVDGRGQRYNPSMIRVGVGKGTAVKPVALETK 664
Query: 430 VE 431
V+
Sbjct: 665 VD 666
>gi|440291801|gb|ELP85043.1| splicing endonuclease positive effector sen1, putative [Entamoeba
invadens IP1]
Length = 1569
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 139/414 (33%), Positives = 213/414 (51%), Gaps = 56/414 (13%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKA--HHSVNSVAIDHLV-- 430
RVL+C+PSN+A+D I+++LL G+ DEN + KIVR+G + + + +++LV
Sbjct: 336 RVLICSPSNAAIDGIIMKLLKMGVYDENGEKKSVKIVRVGTPTLTNPEIKDLVLENLVGK 395
Query: 431 --------------------EQKRDDSAA-------DKQKHGAT----RKD--------- 450
++K ++ A DK K G +KD
Sbjct: 396 EIERRGEMSLEYLDKKINELKEKLKNALATNAKINKDKLKSGLALLLKQKDDLQNKICAM 455
Query: 451 RDSIRSAILNEAVIVCSTLSFSGSALLSKLNHG-FDVVIIDEAAQAVEPATLVPLATGCK 509
+ S+ I++ ++C TL+ +G L + G + IIDEA Q VE + L+PL G +
Sbjct: 456 KHSVTIDIISNCDVICCTLNSAGCDTLQQHLFGKIETCIIDEAVQCVEVSALIPLKYGVE 515
Query: 510 QVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSRE 569
+ ++GD QLP+TV+SP + Y SLF+RL G V +L QYRM ++R FPS E
Sbjct: 516 RCIMIGDQKQLPSTVLSPKSITYKYNKSLFERLLECGLNVTLLTQQYRMESKIREFPSNE 575
Query: 570 FYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLL 629
FY+ L DG +E + F ++ GKE + S N +EV V+ L
Sbjct: 576 FYEGRLADGVKIEKINS-------VSNSVLFLNVC-GKEDRLGKESSLFNTEEVKAVVFL 627
Query: 630 FHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKD 689
++ + + II+PYR QV ++ ++ +S V+ + TVDG QGRE D
Sbjct: 628 LTEISKNVECVHWD--IGIITPYRKQVLDVKKAIEQNEVAKSLNVL-VNTVDGFQGREFD 684
Query: 690 VAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLV 743
+ I SCVR+S+ IGF+ D RR+NV ITRAK ++ VVG TLR+ K W + +
Sbjct: 685 IVIMSCVRSSEHNGIGFVEDERRLNVAITRAKRALCVVGNIKTLRQVKVWEDYI 738
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 120/251 (47%), Gaps = 28/251 (11%)
Query: 56 DTYKDVDDYLATFEPLLFEEVKAQI---IQKKDEEEVQEWKLRLVMECGEADGFHLPSVT 112
+ Y + D Y++T +P +F+E ++ I I +K+ E V +K+++V + VT
Sbjct: 91 NVYTNTDQYISTLKPFVFDECRSSIEKNINEKENENV--YKVKVVSMKSSPQNVEV-YVT 147
Query: 113 YEADEVESISPNDLLLLSKEEFKEGSTFPTTYAFALVEHCQANL-LRLRMYLAGEVI--H 169
E S D + S + FK T+P +C+ L ++ Y G+ +
Sbjct: 148 IECRFQNDFSDFDFFVASTQFFK-TKTYPKN-------NCKTALFVKKTEYGNGQFLMKF 199
Query: 170 INKDAVKSQRLLNIHSLITSSVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLIL 229
I +++S N S+ ++ LF +I ++ + RE++AL + L + +L
Sbjct: 200 ITDGSIESNDFFN-------SIQP-KQPLFIRRIGTVLSPLREFIALNEITELKLQKQVL 251
Query: 230 SA-SEKSSGSQDQSWKIPGLLHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQT 288
+ S K + + S K +L K+ N SQ+ A+ L + F LIQGPPGTGKT T
Sbjct: 252 NPQSYKPTYFRPMSIKYERMLRN--KKEFNDSQIHAMFRSLAKSGFSLIQGPPGTGKTMT 309
Query: 289 ILGLLSAILHA 299
+ G++ IL+
Sbjct: 310 LCGIIGVILYG 320
>gi|403367086|gb|EJY83352.1| Splicing endonuclease positive effector sen1, putative [Oxytricha
trifallax]
Length = 1679
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 128/344 (37%), Positives = 180/344 (52%), Gaps = 45/344 (13%)
Query: 437 SAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHG-FDVVIIDEAAQA 495
+ DK K +D + I+N A I+C+TLS S S L + G + +I+DEA Q
Sbjct: 1098 NGQDKFMFNGKNKKKD-VERMIINRAQIICTTLSMSVSDKLEIIKQGDIEYLIVDEACQC 1156
Query: 496 VEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQ 555
VE L+P K+V LVGD QLPAT S ++ Y SLF+R G ML Q
Sbjct: 1157 VELTNLIPFEHEPKKVILVGDQQQLPATTFSDNSDKTFYSRSLFERFLNCGVNKFMLSIQ 1216
Query: 556 YRMHPEVRSFPSREFYDEALEDGSDV----EDYTT-----RDWHEYRCFGPFSFFDIHEG 606
YRMHP +R FPS +FY+ L+D V +D++T R ++ FFD+ G
Sbjct: 1217 YRMHPSIRQFPSNQFYEGGLKDSESVIQRQQDFSTLPVGLRVLNQ--TVSNLIFFDLKYG 1274
Query: 607 KESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSS---------------------- 644
+ES S N DE F+L LF +I + Q S +
Sbjct: 1275 QES--VNDTSKSNKDEAQFILTLFQDIIKIILQKASQTDFPANVNSDDQKMKHILGDLRQ 1332
Query: 645 QLAIISPYRHQVKQFQERF-----KETFGVESQKVVDITTVDGCQGREKDVAIFSCVRAS 699
++ IISPY+ QV+ ++ K F ++ +++I TVD QGREKD+ I SCVR S
Sbjct: 1333 RVGIISPYKSQVRTLKDYMYPFLKKNGFPID---LIEINTVDAYQGREKDIIIISCVRGS 1389
Query: 700 DKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLV 743
++ +GFL DYRRMNV +TRA+ + VVG ++TL +K+WNN V
Sbjct: 1390 QERQLGFLNDYRRMNVAVTRARHFLWVVGNSTTLNRNKNWNNFV 1433
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 58/111 (52%), Gaps = 12/111 (10%)
Query: 205 SLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQ---------SWKIPGLLHEYIKE 255
SLST RE+ ++S P D+IL+ Q Q ++ ++ + +
Sbjct: 831 SLSTTIREFRTIKSCEFFPTADIILNPQRFLCDKQTQDPFKKFDEKQSRMQAFVYNF-RS 889
Query: 256 NHNASQLEAIHE--GLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARV 304
N N SQ EA+ + + ++ F+LIQGPPGTGKT TI G+L ++ + ++
Sbjct: 890 NFNDSQREALEQVVKMKKEDFLLIQGPPGTGKTHTIQGILGMLISSNVKKI 940
>gi|326436738|gb|EGD82308.1| hypothetical protein PTSG_02976 [Salpingoeca sp. ATCC 50818]
Length = 2425
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 122/342 (35%), Positives = 185/342 (54%), Gaps = 16/342 (4%)
Query: 425 AIDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGF 484
+ID + + RD A ++ T + R + + +++EA I+C TLS S L +
Sbjct: 1832 SIDQQLRKFRD---ALRRCRNDTDRTRRELSARLVDEADIICCTLSSSAIDALRQCKRTV 1888
Query: 485 DVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQ- 543
D++IIDEAAQ EP L+PL GC ++ LVGDP+QL ATV S A GY SLF+R+
Sbjct: 1889 DLLIIDEAAQCAEPDVLIPLQYGCARLVLVGDPMQLSATVFSQYARDAGYERSLFERIHP 1948
Query: 544 --RAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFF 601
RA ML+ QYRMHPE+ FP+ FY++ L V WH+ G + FF
Sbjct: 1949 SMRAWGSAPMLREQYRMHPEICEFPNIMFYEQKLLTAGAVLARKPAPWHD--ALGAYRFF 2006
Query: 602 DIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQE 661
D+ G++ + G S+ N++E V + + P ++A+++PY HQ + +
Sbjct: 2007 DVSWGEQKR-GGGNSFCNVEEAITVARIIFLIAQAAPAEPLRGKIAVVTPYTHQRQCIKG 2065
Query: 662 RFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAK 721
FG + + TVD QG+E DV +FSCVR + +GFL +RMNV +TRA+
Sbjct: 2066 ELARWFGPAVADTISVDTVDAYQGQESDVVVFSCVRT---RQLGFLTQEKRMNVALTRAR 2122
Query: 722 SSILVVGCASTL----REDKHWNNLVKSAEKQDCLFRVSKPY 759
S +VG A L RE W+ LV +A+++ + + ++PY
Sbjct: 2123 LSCYIVGNAYNLRQFNRETLMWSRLVANAQQRSVMGQCAQPY 2164
Score = 39.7 bits (91), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 37/59 (62%), Gaps = 6/59 (10%)
Query: 376 VLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHS--VNSVAIDHLVEQ 432
VL+CAPSN+A+DE+ RL+ + +++S+ ++R+G S V SV++D V Q
Sbjct: 1708 VLLCAPSNAAIDELTRRLMGSS----DLKSHRVSVLRLGQTERISTDVRSVSLDERVAQ 1762
>gi|145509537|ref|XP_001440707.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124407935|emb|CAK73310.1| unnamed protein product [Paramecium tetraurelia]
Length = 1517
Score = 213 bits (541), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 145/457 (31%), Positives = 218/457 (47%), Gaps = 84/457 (18%)
Query: 373 RVRVLVCAPSNSALDEIVLR------------------LLNTGIRDE-NIRSYTPKIVRI 413
+ ++L+C PSN+A+DEI+LR L+ G+ DE NI S K V +
Sbjct: 900 KKKILICTPSNAAIDEIILRIVQKGGLFDSKGNSRQANLIRIGLLDEENIHSEIIKKVSL 959
Query: 414 GLKAHHSVNSVAIDHLVEQKRDDSAADK-----------------QKHGATRKDRDSIRS 456
A H + S + EQ + +A + +HG +R I+
Sbjct: 960 EDLAQHKLFS-SKKFNAEQDQKTTAELRIELCQIQTHVKKLEKKLTQHGLPSDERKIIKE 1018
Query: 457 AI-----------------------------------LNEAVIVCSTLSFSGSALLSKLN 481
I LN+A I+ STLS SGS LSK
Sbjct: 1019 QIMQFNDLRKTKQEYLEKTKDSKRFHKEFYNQFCEKLLNDAEIIFSTLSSSGSDKLSKYL 1078
Query: 482 HGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKR 541
+++I+DEAAQ EP+ ++PL G K++ L+GDP QLPAT SPV+ Y SLF+R
Sbjct: 1079 DQIELLIVDEAAQCTEPSNIIPLRLGIKKMILIGDPKQLPATTFSPVSHQTLYNRSLFER 1138
Query: 542 LQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFF 601
+ L QYRMH E+R FPS FY L+D E TR+ F
Sbjct: 1139 ILDNNVKPYFLDIQYRMHSEIRMFPSEYFYQNKLKDH---ESTNTRNLPSKFFKNRVLFL 1195
Query: 602 DIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQE 661
DI +G+E + S IN E ++ L + +P + + +I Y+ QV+ +
Sbjct: 1196 DILDGQEQKDGTSN--INEQEAIVIVQLIKSIKEEFP----TQTIGVICAYKSQVRYIKT 1249
Query: 662 RFKETFGVES---QKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGIT 718
K+ F E+ + + I TVD QG+E+D+ +FSCVR+S IGFL D RRMNV +T
Sbjct: 1250 LLKQKFQDENIFDENTISINTVDSFQGQEEDIILFSCVRSSQTGGIGFLNDGRRMNVALT 1309
Query: 719 RAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRV 755
RAK+++ ++G A TL + W +++K+ +++ R+
Sbjct: 1310 RAKNALFILGNAITLSKSNLWRSMLKNIQQRKLYRRI 1346
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 65/153 (42%), Gaps = 40/153 (26%)
Query: 198 LFSLKICSLSTIAREYLALRSVGS-LPFKDLIL--SASEKSSGS------------QDQS 242
+F L+T+ REY + + P LI S ++ GS Q Q+
Sbjct: 774 VFLFPFSKLTTLIREYQMITKLNQKTPLAGLIYNPSTQQQQIGSDIVGNGTDQFKNQIQN 833
Query: 243 WKIPGLLHEYIKENHNASQLEAIHEGLLR-KAFVLIQGPPGTGKTQTILGLLSA------ 295
+ + + E +N SQ +I E +L+ K L+QGPPGTGKT +LGLLS
Sbjct: 834 KDLLDSFFQLVDEKYNKSQANSIREIILKEKGICLVQGPPGTGKTHLLLGLLSGAYEYMK 893
Query: 296 ---------ILHATPA---------RVHSKGGL 310
IL TP+ R+ KGGL
Sbjct: 894 LTNKFPKKKILICTPSNAAIDEIILRIVQKGGL 926
>gi|429965384|gb|ELA47381.1| hypothetical protein VCUG_01150 [Vavraia culicis 'floridensis']
Length = 1568
Score = 211 bits (538), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 132/388 (34%), Positives = 217/388 (55%), Gaps = 29/388 (7%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAH--HSVNSVAIDHLV-- 430
RVL+CAPSN+A+DE+ R+ + ++D +++ +++RIG++ + ++ + +D ++
Sbjct: 1191 RVLICAPSNAAVDELARRINDLHLKDRDVKRL--QVLRIGVQNNIDDNLKMLTLDCIIKR 1248
Query: 431 --EQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVI 488
E+KR+ + T +R + +L + +VC+TLS S L+ N FD++I
Sbjct: 1249 ELEEKRN--GMNLMNLEVTNSERAKRKCELLKRSNVVCATLSSSAKELIKVANIDFDILI 1306
Query: 489 IDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYP 548
IDEA Q+VE +TL+PL +V LVGDP QLP T+IS +H Y SLF RLQ+ YP
Sbjct: 1307 IDEACQSVETSTLIPLKFNPIKVVLVGDPKQLPPTLIS---KHKPYEQSLFARLQKT-YP 1362
Query: 549 VKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKE 608
+L QYRMHP + FP++ FY L ++ R P SF I+ E
Sbjct: 1363 SVLLNVQYRMHPLIVEFPNQYFYRARLLTHKSIQK---RQNPYENVIPPISFIQIN--GE 1417
Query: 609 SQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFG 668
+ S+ NI+E ++ + +L+ +++ II+PY+ Q+K + KE
Sbjct: 1418 EKTDNCFSFYNIEEAQYIGSIISELMEQVKNYDFFNKIGIITPYKAQMK----KIKEVLL 1473
Query: 669 VESQKVVD---ITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSIL 725
Q + D + TVDG QG+EKDV + S V++ K++GFL+D RR+NV ITRAK S++
Sbjct: 1474 SIRQDIFDFVCVNTVDGFQGQEKDVILISTVKS---KNMGFLSDVRRINVSITRAKHSLI 1530
Query: 726 VVGCASTLREDKHWNNLVKSAEKQDCLF 753
++G + L W +++ K++ +F
Sbjct: 1531 IIGNSKVLSSSGAWKSMLNHYGKKNFVF 1558
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 54/105 (51%), Gaps = 6/105 (5%)
Query: 203 ICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIKENH--NAS 260
+C S+ REY+AL + LP +L++ + GL+ + +++ + N S
Sbjct: 1077 VCCFSSFFREYVALYKLQHLPILPSVLASKNAETAPLVDD---VGLVEQVVQKMYGLNKS 1133
Query: 261 QLEAIHEGLLRKAFV-LIQGPPGTGKTQTILGLLSAILHATPARV 304
Q AI + +F LI GPPGTGKT+ I+ L+ ++ +A V
Sbjct: 1134 QQNAIKHVYMSPSFFSLIHGPPGTGKTKMIVSLIESLFNAQIVSV 1178
>gi|307107371|gb|EFN55614.1| hypothetical protein CHLNCDRAFT_133757 [Chlorella variabilis]
Length = 2033
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 128/341 (37%), Positives = 185/341 (54%), Gaps = 38/341 (11%)
Query: 454 IRSAILNEAVIVCSTLSFSGSALLSKLNHG---------------------FDVVIIDEA 492
+R+A++ ++ +V +TLS +G LL + FD +I DEA
Sbjct: 1674 LRAAVVAQSEVVAATLSSAGGELLQLMPRAASGGGPGGGAGAAGGAAPLLGFDAIICDEA 1733
Query: 493 AQAVEPATLVPL---ATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPV 549
AQA+EP+TL+ L A G + V LVGDP QLPATV+S A SLF+RL +AGYP+
Sbjct: 1734 AQALEPSTLIALQLLAPGGRLV-LVGDPQQLPATVVSRAAAAAALAQSLFERLMQAGYPL 1792
Query: 550 KMLKTQYRMHPEVRSFPSREFYDEALED--------GSDVEDYTTRDWHEYRCFGPFSFF 601
+L QYRMHP + +FP+ FY L D + T WH+ C P +F+
Sbjct: 1793 CLLSQQYRMHPAISAFPASFFYSGKLLDAAAVAGGGSAGAGGGRTAPWHDRPCLPPLAFW 1852
Query: 602 DIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQE 661
D EG+E G S N +E + +L+ +L+ Y Q +A+++PY+ Q+ Q +
Sbjct: 1853 DCREGREWGGGGGSSVSNTEEAEVAYVLYAELVGRYRQ--DVGDVAVLTPYKAQLSQLRR 1910
Query: 662 RFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRA---SDKKSIGFLADYRRMNVGIT 718
F++ G + + V TVDG QGRE DV IFSCVRA +GFLAD RRMNV +T
Sbjct: 1911 TFQQRGGTAAAEAVQFATVDGFQGREADVVIFSCVRAHGAGSGGGVGFLADCRRMNVALT 1970
Query: 719 RAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRVSKPY 759
R + S+ V+G ++TL + W L++ + CLF + PY
Sbjct: 1971 RGRRSLWVIGHSATLEACEPWQELMRHCRQHRCLFVAAPPY 2011
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 62/158 (39%), Gaps = 63/158 (39%)
Query: 272 KAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLREIKRGPELPMHEKYNHWGRA 331
K VL+QGPPGTGKT ILG+LSA L
Sbjct: 1376 KQVVLVQGPPGTGKTSAILGMLSAFLAGN------------------------------- 1404
Query: 332 SPWLVGANPRDNIMPIDGDDGFFPTTGNELKP-------------EVVNSSRRYRVRVLV 378
A R I P G +G +P V+N + VRVL+
Sbjct: 1405 ------AQARPAIKPASGA-----ASGGTKQPAVAAAAAARQKAAAVMNPA----VRVLL 1449
Query: 379 CAPSNSALDEIVLRLLNTGI--RDENIRSYTPKIVRIG 414
A SN+A+DE+ RL + G+ RD + R T +VR G
Sbjct: 1450 AAQSNAAVDELCTRLASKGVVGRDGSQRQAT--VVRFG 1485
>gi|145514990|ref|XP_001443400.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124410778|emb|CAK76003.1| unnamed protein product [Paramecium tetraurelia]
Length = 1068
Score = 209 bits (532), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 121/300 (40%), Positives = 176/300 (58%), Gaps = 13/300 (4%)
Query: 458 ILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDP 517
ILNEA I+CSTL+ SGS LSK +++I+DEAAQ EP+ ++PL G +++ L+GDP
Sbjct: 738 ILNEAEIICSTLNSSGSEKLSKYMDQIELLIVDEAAQCTEPSNIIPLRLGVEKMILIGDP 797
Query: 518 VQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALED 577
QL AT SP + Y SLF+R+ + L QYRM E+R FPS EFY L D
Sbjct: 798 KQLAATTFSPSSTTGFYNRSLFERILDNNFQPHFLNIQYRMDSEIRKFPSFEFYQNKLID 857
Query: 578 GSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMY 637
V R E F DI +G+E + + S+IN E + V+ L + S+
Sbjct: 858 HESV---IQRKLPENYFKKQMLFLDIIDGQEKR--DNTSYINEKEANLVIQLIN---SIK 909
Query: 638 PQLKSSSQLAIISPYRHQVKQFQERFKET---FGVESQKVVDITTVDGCQGREKDVAIFS 694
Q K+ + + +IS Y+ QVK Q K++ K++ + TVD QG+EKD+ IFS
Sbjct: 910 EQFKTQT-IGVISSYKAQVKLIQTLIKQSNTRLKDIDNKILSVNTVDSFQGQEKDIIIFS 968
Query: 695 CVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFR 754
CVR+S+ K IGFL D RR+NV +TRAK ++ V+G TL + + W NL+++ +++ L+R
Sbjct: 969 CVRSSECKGIGFLNDGRRINVALTRAKFALFVIGNGLTLSKGQLWRNLLQNMQERQ-LYR 1027
Score = 46.2 bits (108), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 41/65 (63%), Gaps = 6/65 (9%)
Query: 373 RVRVLVCAPSNSALDEIVLRLLN-TGIRDENIRSYTPKIVRIGLKAHHS-----VNSVAI 426
R ++L+CAPSN+A+DEI+LR++ + D + + K++RIGL S V V++
Sbjct: 586 RKKILICAPSNAAIDEIILRIMRPDSLFDSDGKPREVKVIRIGLIDEESEFSDTVKKVSL 645
Query: 427 DHLVE 431
++L +
Sbjct: 646 EYLAQ 650
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 54/115 (46%), Gaps = 17/115 (14%)
Query: 198 LFSLKICSLSTIAREYLALRSVGSL--PFKDLILSASEKS-------SGSQDQSWKIPGL 248
+F + ++TI REY L + + P ++I + + GS ++
Sbjct: 459 VFLIPFMKITTIIREYQTLSQLRYMMTPLFNIIYDPNRQQHLLGTEIGGSWTAQFRNQVS 518
Query: 249 LHEY-------IKENHNASQLEAIHEGLLR-KAFVLIQGPPGTGKTQTILGLLSA 295
EY + + N SQ +I E L + K L+QGPPGTGKT T++G+LS
Sbjct: 519 NSEYLTKFFKLVDQKFNKSQANSIKEILQQEKGISLLQGPPGTGKTHTLIGILSG 573
>gi|440492195|gb|ELQ74785.1| tRNA-splicing endonuclease positive effector (SEN1), partial
[Trachipleistophora hominis]
Length = 525
Score = 209 bits (531), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 135/398 (33%), Positives = 219/398 (55%), Gaps = 32/398 (8%)
Query: 375 RVLVCAPSNSALDEIVLR---LLNTGIRDENIRSYTPKIVRIGLKAH--HSVNSVAIDHL 429
R+L+CAPSN+A+DE+ R L G +E +R ++RIG++ + ++ + +D +
Sbjct: 148 RILICAPSNAAVDELAKRINDLRMKGREEEKLR-----VLRIGVQNNIDDNLKMLTLDCI 202
Query: 430 VEQKRDD--SAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVV 487
+E++ ++ + A T +R + +L + +VC+TLS S L+ N FD++
Sbjct: 203 IEKELEERKNRAGLTNFEVTNSERTKRKFELLKRSNVVCATLSSSAKELIKVANIDFDIL 262
Query: 488 IIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGY 547
+IDEA Q+VE +TL+PL +V LVGDP QLP TVIS Y SLF RLQ+ Y
Sbjct: 263 VIDEACQSVETSTLIPLKFNPTKVVLVGDPKQLPPTVISNCKP---YEQSLFVRLQKT-Y 318
Query: 548 PVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGK 607
+L QYRMHP + FP++ FYD+ L+ V+ R+ P SF ++
Sbjct: 319 QSVLLNVQYRMHPTIVEFPNQYFYDKRLQTHKSVKK---RENPYQNVVPPISFIQVN--G 373
Query: 608 ESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETF 667
E + S+ N+ E ++ + +L+ S+++ II+PY+ Q+K+ +E
Sbjct: 374 EERTDSYFSFYNVAEARYIGNIISELMKNVKNYDLSNKIGIITPYKAQMKKIKEVL---L 430
Query: 668 GVESQKV--VDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSIL 725
G+ + V + TVDG QG+EKDV + S V++ K+IGFL+D RR+NV ITRAK S++
Sbjct: 431 GIRKDILDFVCVNTVDGFQGQEKDVILISTVKS---KNIGFLSDLRRINVSITRAKHSLI 487
Query: 726 VVGCASTLREDKHWNNLVKSAEKQDCLFRVSKPYASFF 763
++G L W +++ K++ +F Y S F
Sbjct: 488 IIGNTKVLSTSNAWKSMLSHYRKKNLVF---NHYKSIF 522
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 49/106 (46%), Gaps = 18/106 (16%)
Query: 203 ICSLSTIAREYLALRSVGSLPFKDLILSASE--------KSSGSQDQSWKIPGLLHEYIK 254
+C S+ REY+AL + P +L++ +S ++ +I GL
Sbjct: 34 VCCFSSFFREYVALYKLQHFPCLPSVLASDNVKITPLVGDASLVENVILRIHGL------ 87
Query: 255 ENHNASQLEAIHEGLLRKAFV-LIQGPPGTGKTQTILGLLSAILHA 299
N SQ AI AF LI GPPGTGKT+ I+ L+ ++ A
Sbjct: 88 ---NGSQQIAIKNVYTSAAFFSLIHGPPGTGKTKMIVSLIESLFSA 130
>gi|397569654|gb|EJK46882.1| hypothetical protein THAOC_34429 [Thalassiosira oceanica]
Length = 1051
Score = 209 bits (531), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 125/325 (38%), Positives = 175/325 (53%), Gaps = 18/325 (5%)
Query: 435 DDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQ 494
D + A + A R I + +L+ IV +TL +G+ L + F+VV++DEAAQ
Sbjct: 693 DVAGATSKGQRAANSARQQIETHVLDSVHIVLTTLGTAGARSLEAASK-FEVVVVDEAAQ 751
Query: 495 AVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKT 554
G K LVGDP QLPAT+ + + + SLF+RL+ AG+ V +L T
Sbjct: 752 -----------LGSKHAILVGDPQQLPATIFNVSGKTTKFDRSLFQRLEEAGHEVHLLDT 800
Query: 555 QYRMHPEVRSFPSREFYDEALEDGSDV---EDYTTRDWHEYRCFGPFSFFDIHEGKESQP 611
QYRMHP + FP R FYD L DG +V E + +R FG F F I + + ++
Sbjct: 801 QYRMHPMISLFPRRIFYDGKLLDGPNVKHPEYGSPLKRTIFRSFGAFQPFTILDLESTED 860
Query: 612 AGSGSWINIDEVDFVLLLFHKLISMYP-QLKSSSQLAIISPYRHQVKQFQERFKETFGVE 670
S N E L LF L S QL S++A+I+PY Q + F G E
Sbjct: 861 RAGTSMANTAEAQLALHLFQNLRSATGGQL--GSRVAVITPYSQQAALLRRTFSSGLGSE 918
Query: 671 SQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCA 730
++ V+I++VD QGRE + IFSCVRA+ K IGFLAD RRMNV +TRAK + V+
Sbjct: 919 YERSVEISSVDAFQGREAHIVIFSCVRAAGSKGIGFLADVRRMNVALTRAKHFLFVIARC 978
Query: 731 STLREDKHWNNLVKSAEKQDCLFRV 755
S++R + +W +LVK A Q + +V
Sbjct: 979 SSIRVNPYWRDLVKHASGQSAVVKV 1003
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 122/494 (24%), Positives = 201/494 (40%), Gaps = 126/494 (25%)
Query: 4 DKDKPQDEASIFRFCKIILGWDYFR---LVKESQERNDK-NSKKVDR--------GKLGL 51
DK +P D FR WD+ L S +N + N K V + G+ L
Sbjct: 147 DKIEPNDYWKNFR------DWDFLSDLSLKMSSSNKNGQTNGKSVGKRKGDDTESGEAQL 200
Query: 52 RE-VKDTYKDVDDYLATFEPLLFEEVKAQII----------QKKDEEEVQEWKLRLVME- 99
R+ + +T++ +Y A + PL +E +AQ++ +KK E+ +L+ + +
Sbjct: 201 RKPLPNTFQSYREYCALWAPLCLDEARAQLLSDAMTEIPYWRKKPEKNPVRVRLQPLRKD 260
Query: 100 ---CGEADGFHLPSVTYEADEVESISPNDLLLLSKEE-----FKEGSTFPTTYAFALVEH 151
E G + SV S ND++LL K E +G+ ++V H
Sbjct: 261 VNGSSEDMGLQVKSVLTTDFADRSFMSNDIVLLVKSESYLWDATKGNHSAGGARKSIVGH 320
Query: 152 CQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSAVEKRLFSLKICSLSTIAR 211
Q + R L G +I + ++ + A E + L C+++++ R
Sbjct: 321 IQHS----RRSLDGLLIQVTRE-------------LWGQFEATEVVIVKLG-CNITSL-R 361
Query: 212 EYLALRSVGSLPFKDLILS-ASEKSS----------------------GSQDQSWKIPGL 248
E+ AL + ++P D IL EK+S + S +
Sbjct: 362 EFTALCRMDTIPLLDYILGPGQEKTSIPVTKGDVTDERAEKKAKKEILTAMGGSSALGRG 421
Query: 249 LHEYIKENHNASQLEAIHE-----GLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPAR 303
++ + N SQL AI G+ F LI+GPPGTGKT T+ LL+A LH
Sbjct: 422 FADFASKKFNVSQLGAISASSKEYGM--GGFTLIKGPPGTGKTTTLCALLNA-LHIRQMN 478
Query: 304 VHSKGGLREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKP 363
+ E+++ + E Y+ +VG ++
Sbjct: 479 QY----FNEVRK-----LAESYDA-------VVGKRAALSL------------------- 503
Query: 364 EVVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNS 423
+S+ R R R+LVCAPSN+A+D I+L++ G D N Y P ++RIG SV
Sbjct: 504 ---SSATRKRPRILVCAPSNAAVDNIILKIFEDGFVDGNGNRYNPSMIRIGRGQSASVKD 560
Query: 424 VAIDHLVEQKRDDS 437
V ++ VE+ D+
Sbjct: 561 VCLEEKVERYLSDA 574
>gi|449269034|gb|EMC79843.1| putative helicase senataxin, partial [Columba livia]
Length = 2491
Score = 208 bits (530), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 214/804 (26%), Positives = 340/804 (42%), Gaps = 190/804 (23%)
Query: 58 YKDVDDYLATFEPLL----FEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTY 113
++ DY TF PL+ FE + + I+ + E + + L C + + +
Sbjct: 1754 FQGYTDYFNTFFPLMMLNAFETLAQEWIENQRVRE-RSYCFWLQNFCADLNRADFTAHFK 1812
Query: 114 EADEVESISP--NDLLLL----SKEEFKEGSTFPTTYAFALVEHCQANLLRLRMYLAGEV 167
E+D + + P +DL+ L ++ F+E S +V H G V
Sbjct: 1813 ESDLAKQLHPKEDDLIFLVVQNRRDTFREESEMDNI----IVSH------------VGLV 1856
Query: 168 IHINKDAVKSQRLLNIHSLITSSVSA-------VEKRLFSLKICSLSTIAREYLALRSVG 220
++ + S R H+ SV + ++ + + SL T R + L +
Sbjct: 1857 TRFSRASGCSSRQQEHHTACHLSVQTRGNLSPFLNTQVKCVVVGSLVTTHRMFRGLLLLN 1916
Query: 221 SLPFKDLILSASEKSSGSQD---QSWKIPGLLHEYIKENHNASQ----LEAIHEGLLRKA 273
P I++ S +D S ++EY ++ A + + H GL +
Sbjct: 1917 RSPLAKPIINPSYNDFCPRDLVVASENAASDMNEYNEDQKRAIETAYAMVKQHPGLPK-- 1974
Query: 274 FVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLREIKRGPELPMHEKYNHWGRASP 333
LI GPPGTGK++TI+GLLS + L+E R +EK
Sbjct: 1975 ICLIHGPPGTGKSKTIVGLLSRV-------------LKENTR------NEKATQ------ 2009
Query: 334 WLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNSSRRYRVRVLVCAPSNSALDEIVLRL 393
T +++KP R LVCAPSN+A+DE++ ++
Sbjct: 2010 ----------------------KTNSKMKPN----------RFLVCAPSNAAVDELMKKI 2037
Query: 394 LNT---GIRDENIRSYTPKIVRIGLKAHHSVNSVA--------IDHLVEQKRDDSAADKQ 442
+ +++ I + L A ++NS ++H ++++ D D Q
Sbjct: 2038 ITAFKGKCQNKQPLGNCGDITLVRLGAEKAINSEVRGFSLDKQVEHRMKRRPADCDQDIQ 2097
Query: 443 KHGAT----------RKDRD---------------------------------------- 452
K A ++ RD
Sbjct: 2098 KKKAALDQELDRLSRQRARDRCEKREVGRKYQMLAAEISRLAKERQELASQIKEVRGHSQ 2157
Query: 453 SIRSAILNEAVIVCSTLSFSGSALL------SKLNHGFDVVIIDEAAQAVEPATLVPLAT 506
+++ I+ EA ++C TLS SG LL +L+ F VI+DEA Q+ E TL+PL
Sbjct: 2158 KVQADIILEADVICCTLSTSGGGLLESTFARQRLD-PFSCVIVDEAGQSCEVETLIPLIH 2216
Query: 507 GCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQR-----------AGYPVKMLKTQ 555
C ++ LVGDP QLP TV S A+ GY SL RL + PV L Q
Sbjct: 2217 RCNKLVLVGDPRQLPPTVKSVKAQDYGYDHSLMARLHQHLEQQVQNNVLRSLPVVQLTVQ 2276
Query: 556 YRMHPEVRSFPSREFYDEALE-DGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGS 614
YRMHP++ FPS Y L D + E+ + +W F P+ FD+ + +E + +
Sbjct: 2277 YRMHPDICLFPSNYVYGRTLRTDKATEENRCSSEWP----FQPYLIFDVGDSREER--DN 2330
Query: 615 GSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKV 674
S+ N EV V+ L + L ++ II+PY Q K+ QE+ + S
Sbjct: 2331 DSFSNPQEVKLVMELIRTIKEKRKDL-GLRRIGIITPYSAQKKKIQEQLDRVYRNNSPGE 2389
Query: 675 VDITTVDGCQGREKDVAIFSCVRA-SDKKSIGFLADYRRMNVGITRAKSSILVVGCASTL 733
VD TVD QGREKD I +CVRA S + SIGFLA +R+NV ITRA+ S+ ++G TL
Sbjct: 2390 VD--TVDAFQGREKDCIIVTCVRANSTRGSIGFLASLQRLNVTITRARFSLFILGRLKTL 2447
Query: 734 REDKHWNNLVKSAEKQDCLFRVSK 757
E+K WN L++ A+++ + + ++
Sbjct: 2448 MENKDWNELIQDAQRRGAIIKTTE 2471
>gi|374723515|gb|EHR75595.1| putative DNA helicase [uncultured marine group II euryarchaeote]
Length = 662
Score = 208 bits (530), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 120/306 (39%), Positives = 174/306 (56%), Gaps = 19/306 (6%)
Query: 456 SAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVG 515
+++L+ A ++C+T G LL + F VV++DEA QA EP+ LVP+ GC+Q+ LVG
Sbjct: 360 ASVLDGAEVICATTIGVGHKLLR--DRRFPVVLMDEATQASEPSALVPITRGCRQLVLVG 417
Query: 516 DPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEAL 575
D QLP TVIS A+ G G SLF+RL G ML TQYRMHP +R +PS FY++ L
Sbjct: 418 DHKQLPPTVISEAAQQGGLGQSLFERLTECGLDTHMLTTQYRMHPTIREYPSARFYEDRL 477
Query: 576 EDGSDVED------YTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLL 629
+DG D + DW P +F I +G E S N+DE VL +
Sbjct: 478 DDGCTPADRPPAAGFLWPDWDH-----PVAFVPI-DGSEIVDEEGSSKSNLDEAAKVLSI 531
Query: 630 FHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKV---VDITTVDGCQGR 686
+ L+S + + + +I+PY QV+ + F++ G E ++I +VDG QGR
Sbjct: 532 VNGLLSAGDL--TPADIGVITPYSGQVRLLVDLFEQAGGREEGAPYAGLEIKSVDGYQGR 589
Query: 687 EKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSA 746
EK++ +FS VRA++ IGFL D RR+NV ITRA+ ++V+G TLR D W + A
Sbjct: 590 EKEIIVFSAVRANEHGEIGFLRDRRRLNVAITRARRGLIVLGNTKTLRHDGTWRAWLDWA 649
Query: 747 EKQDCL 752
E+++
Sbjct: 650 EERNLF 655
Score = 43.1 bits (100), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Query: 258 NASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILH 298
N SQ A+ L R+ LIQGPPGTGKT T + LLSA+++
Sbjct: 215 NPSQRAAVESALERR-LTLIQGPPGTGKTHTAVHLLSALVN 254
>gi|301613470|ref|XP_002936221.1| PREDICTED: probable helicase senataxin [Xenopus (Silurana)
tropicalis]
Length = 2535
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 150/458 (32%), Positives = 222/458 (48%), Gaps = 79/458 (17%)
Query: 368 SSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTP-------KIVRIGLKAHHS 420
S++ R RVLVCAPSN+ALD+++ +++ +++ TP +VR+G + S
Sbjct: 1901 SAKNKRNRVLVCAPSNAALDDLMKKII-LEFKEKCHNKNTPLGNCGDINLVRLGAEKTIS 1959
Query: 421 VNSVA------IDHLVEQKRDDSAADKQKH------------------------------ 444
+ V ++H + + + D K+K
Sbjct: 1960 SDVVKFSLDCQVNHRITRAQQDQELHKRKELLDRRLDELSRRRALEKCNKNTCAPLDEEI 2019
Query: 445 --------------GATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKL-----NHGFD 485
R+ ++ I+ E+ ++C TLS SG LL F
Sbjct: 2020 ARLSKERQLLADSLKLVRRRPQELQRTIILESHVICCTLSTSGGILLESAFRQLGQEPFS 2079
Query: 486 VVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKR---- 541
VI+DEA Q+ E L+PL C ++ LVGDP QLP TVIS AE LGYG SL R
Sbjct: 2080 CVIVDEAGQSCEVENLIPLLHRCSKLVLVGDPEQLPPTVISMKAEELGYGQSLMSRMCSF 2139
Query: 542 LQRAGY--PVKMLKTQYRMHPEVRSFPSREFYDEALE-DGSDVEDYTTRDWHEYRCFGPF 598
L G PV L QYRMHP++ FPS FY L+ D + E + DW F P+
Sbjct: 2140 LDSTGTKSPVLHLTVQYRMHPDICLFPSHYFYKRMLKTDRATEEVRCSSDWP----FQPY 2195
Query: 599 SFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQ 658
FD+ +G E + S+ N E+ + L KLI + + +I+PYR Q +
Sbjct: 2196 MVFDVADGFEQK--ERESFCNPQEIKVAVALI-KLIKSRKKEFCFRNIGVITPYRAQKMR 2252
Query: 659 FQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRA-SDKKSIGFLADYRRMNVGI 717
E + FG + + ++ TVDG QGR+KD I +CVRA S + IGFLA +R+NV I
Sbjct: 2253 IIEELRRAFGNDI-RPGEVDTVDGFQGRQKDCIIVTCVRANSTQGGIGFLASRQRLNVTI 2311
Query: 718 TRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRV 755
TRAK S+ ++G TL E+K WN+L++ A+++ L +
Sbjct: 2312 TRAKFSLFILGSLRTLMENKDWNHLIQDAQRRGALIKT 2349
>gi|412993880|emb|CCO14391.1| predicted protein [Bathycoccus prasinos]
Length = 1285
Score = 205 bits (522), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 131/376 (34%), Positives = 199/376 (52%), Gaps = 34/376 (9%)
Query: 376 VLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQKRD 435
+L + SN A+D +V L G+R I P+ VR L + I+ +D
Sbjct: 774 ILCTSDSNIAVDNLVDGLSRAGVRVARI--GRPEAVRQDLMPFMVESIAGIEPGSNMSKD 831
Query: 436 DSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQA 495
Q++ A + +L A ++C+T + +GS +L + + F +IDEA QA
Sbjct: 832 ------QQYQAI--------NGVLRRAEVICATCAGAGSDILERFS--FAACLIDEATQA 875
Query: 496 VEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQ 555
EPAT+VP+ GCKQ+ L+GD QLP T+IS A+ G GTSLF+R+ G MLK Q
Sbjct: 876 TEPATVVPMTKGCKQIVLIGDQNQLPPTIISRDADERGLGTSLFERMLSRGIRTFMLKVQ 935
Query: 556 YRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFG-PFSFFDIHEGKESQPAGS 614
YRMHP + FPS++FY L G+ ++ P +F D EG+E +
Sbjct: 936 YRMHPAIAKFPSQQFYSNELLSGTPPSQRRAPQGFDWPVPAVPLAFVDCPEGEER--SDG 993
Query: 615 GSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQE----------RFK 664
S +N E V+ L KL++ + L + + I+SPY QV+ ++ RF
Sbjct: 994 ASQMNTIEAQKVVTLVKKLMAEHEVL--ACDIGIVSPYAAQVRAIKKLLQPNAVKRTRFD 1051
Query: 665 ETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSI 724
+S +++ ++DG QGREK+V +FSC RA+ ++GFLAD RR+NV +TRA+ +
Sbjct: 1052 APAAPDSDAAIEVCSIDGFQGREKEVIVFSCTRANLMGNVGFLADRRRVNVMLTRARRGL 1111
Query: 725 LVVGCASTLR-EDKHW 739
++VG TLR E + W
Sbjct: 1112 IIVGHLRTLRGEPEVW 1127
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 31/58 (53%), Gaps = 7/58 (12%)
Query: 240 DQSWKIPGLLHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAIL 297
D + IP + H N SQ EA+ L ++ LIQGPPGTGKT T + L+ L
Sbjct: 717 DMAQDIPAMQH------MNKSQHEALRAALFQR-ITLIQGPPGTGKTHTAVALVQMWL 767
>gi|426222918|ref|XP_004005627.1| PREDICTED: probable helicase senataxin [Ovis aries]
Length = 2662
Score = 205 bits (522), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 224/810 (27%), Positives = 356/810 (43%), Gaps = 131/810 (16%)
Query: 17 FCKIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLL---- 72
F K +L W Y V D+ + R V ++D DY F PL+
Sbjct: 1691 FVKEVLKWRYEMFVN-----FDQCGPPSSLCQSIARRVPIRFQDCGDYFNVFFPLVVLNT 1745
Query: 73 FEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADEV-ESISP--NDLLLL 129
FE V + I ++E+ + LR G+ + V E E+ + + P NDL+ L
Sbjct: 1746 FETVAQEWISSPNKEKFHQLHLRKFP--GDYKKYWEFVVYLEESELAKQLHPRENDLVFL 1803
Query: 130 SKEEFKEGSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKD----AVKSQRLLNIH- 184
E E L + C+ + + V+H K ++++Q L ++
Sbjct: 1804 VPERLNEEKK--DLEWSHLEDACEYYCGYVHKFRRTSVMHNGKSECSVSIQTQDNLPVNL 1861
Query: 185 -----SLITSSVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPF----KDLILSASEKS 235
+ SS+ +++L ++ + S R LA + P KDL+ + SE+
Sbjct: 1862 NELVKCFVISSLVTTQRKLKAMSLLS----GRNQLARAILNPNPMDFCTKDLLTTTSER- 1916
Query: 236 SGSQDQSWKIPGLLHEYIKENHNASQLEAI--------HEGLLRKAFVLIQGPPGTGKTQ 287
+ Y+K+ N Q +AI H + K LI GPPGTGK++
Sbjct: 1917 -------------IVAYLKD-FNEDQKKAIETAYAMVKHSPSVAK-ICLIHGPPGTGKSK 1961
Query: 288 TILGLLSAILHATPARVHS-KGGLREIKRGPEL---PMHEKYNHWGRASPWLVGANPRDN 343
TI+G+L +L R HS + +IK+ L P + + + +D
Sbjct: 1962 TIVGILYRLLTENQRRGHSDENSNAKIKQNRVLVCAPSNAAVDELMKKIILEFKEKCKDK 2021
Query: 344 IMPID--GDDGFF-----PTTGNELKPEVVNSSRRYRVRVLVCAPS------------NS 384
P+ GD + NE+ ++S +R++ + PS +
Sbjct: 2022 KNPMGNCGDINLVRLGPEKSINNEVLRFSLDSQVNHRMKKDL--PSHVQEMHKRKEFLDR 2079
Query: 385 ALDEIV-LRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQKRDDSAADKQK 443
LDE+ R L G R+ + KI R+ +++++ ++ K+
Sbjct: 2080 QLDELSRQRALCRGGRESQRQELDGKIARVS----------------KERQELASKIKEV 2123
Query: 444 HGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHG-----FDVVIIDEAAQAVEP 498
G +K + I IL +I C TLS SG LL G F VI+DEA Q+ E
Sbjct: 2124 QGRPQKTQSII---ILESHIICC-TLSTSGGLLLEAAFRGQGGVPFSCVIVDEAGQSCEV 2179
Query: 499 ATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQR-----------AGY 547
TL PL C ++ LVGDP QLP TVIS A+ GY S+ R +
Sbjct: 2180 ETLTPLIHRCNKLVLVGDPKQLPPTVISVKAQDYGYDQSMMARFHKLLEESVEHNMIGRL 2239
Query: 548 PVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVE-DYTTRDWHEYRCFGPFSFFDIHEG 606
PV L QYRMHP++ FPS YD AL+ E + DW F P+ FD+ +G
Sbjct: 2240 PVLQLTIQYRMHPDICLFPSSYVYDGALKTNRGTETSRCSSDWP----FQPYLVFDVGDG 2295
Query: 607 KESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKET 666
E + + S++N+ E+ V+ L KLI + + + II+ Y+ Q Q+ +
Sbjct: 2296 LERR--DNDSYVNVQEIKLVMELI-KLIKDKRRDINFRNIGIITHYKAQKTMIQKDLDKE 2352
Query: 667 FGVESQKVVDITTVDGCQGREKDVAIFSCVRA-SDKKSIGFLADYRRMNVGITRAKSSIL 725
F + + ++ TVD QGR+KD I +CVRA + + SIGFLA +R+NV ITRAK S+
Sbjct: 2353 F--DRKGAAEVDTVDAFQGRQKDCVIVTCVRANATQGSIGFLASLQRLNVTITRAKYSLF 2410
Query: 726 VVGCASTLREDKHWNNLVKSAEKQDCLFRV 755
++G TL E++HW +L++ A+K+ + +
Sbjct: 2411 ILGHLRTLVENRHWYHLIQDAQKRGAIIKT 2440
>gi|403367834|gb|EJY83741.1| Splicing endonuclease positive effector sen1, putative [Oxytricha
trifallax]
Length = 1199
Score = 205 bits (522), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 123/320 (38%), Positives = 174/320 (54%), Gaps = 30/320 (9%)
Query: 454 IRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFL 513
+ + I+ ++ I+CSTLS +G + + +IIDEA Q +EP+TL+P G +V L
Sbjct: 731 VENQIILKSKILCSTLSMAGVEKFDIVKDQVEFLIIDEACQCIEPSTLIPFELGPARVIL 790
Query: 514 VGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDE 573
VGD QLPAT S +E Y S F+RL GY ML+ QYRMHP +R +PS+ FY+
Sbjct: 791 VGDQNQLPATTFSDNSERTKYSRSFFERLLDNGYQRYMLQIQYRMHPVIRQYPSQTFYEN 850
Query: 574 ALEDGSDVEDYTTRDWHEY-----RCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLL 628
+ D + +TR+ F P FFD+ +E+ S S N +E F L
Sbjct: 851 RITDDKTI---STREIPPVIESIKTYFTPSVFFDLINSQETLAETSKS--NNEEAQFTLN 905
Query: 629 LFHKLISMYPQLKSSSQ------------LAIISPYRHQVKQFQERFK---ETFGVESQK 673
L L + Q KS++Q + II+PY+ QVK +++ + G Q
Sbjct: 906 LIQLLKEISNQSKSAAQQKSNSFDFLKNKIGIITPYKSQVKILKDQIAPWLRSIGSRLQD 965
Query: 674 VVDITTVDGCQGREKDVAIFSCVRASD----KKSIGFLADYRRMNVGITRAKSSILVVGC 729
++I TVD QGREKD+ IF+CVR++ K S+GFL D RRMNV ITRAK + VVG
Sbjct: 966 -IEINTVDAYQGREKDIIIFNCVRSNSSNQLKNSLGFLVDKRRMNVAITRAKHFLFVVGN 1024
Query: 730 ASTLREDKHWNNLVKSAEKQ 749
++TL D+ W LV + Q
Sbjct: 1025 SNTLNRDQTWKGLVDFCKNQ 1044
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
Query: 258 NASQLEAIHE--GLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARV 304
N SQ EA+ E ++ +LIQGPPGTGKT TI G++S ++ + ++
Sbjct: 521 NPSQREALVEVTKMVDDQLLLIQGPPGTGKTHTITGIISMLIRSGVEKI 569
>gi|303281096|ref|XP_003059840.1| superfamily I helicase [Micromonas pusilla CCMP1545]
gi|226458495|gb|EEH55792.1| superfamily I helicase [Micromonas pusilla CCMP1545]
Length = 1122
Score = 205 bits (521), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 122/322 (37%), Positives = 182/322 (56%), Gaps = 10/322 (3%)
Query: 438 AADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVE 497
A +K K G R+ R+ + ++ ++EA IV +TL+ + + KL HGFD V +DEAAQ+ E
Sbjct: 745 AKNKGKMG--RRLRNVLEASFVDEAEIVFTTLTSASRRVFQKLTHGFDTVFVDEAAQSSE 802
Query: 498 PATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYR 557
TL+P G ++ LVGDP QLP+TV+S A+ + + SLF+R G +L QYR
Sbjct: 803 VETLIPFLHGARRCVLVGDPQQLPSTVLSTAAQGVSFQRSLFERFTSLGAEAVLLSVQYR 862
Query: 558 MHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSW 617
MHPE+R+FPSR FY+ L D V +H P+ FD +GKE + + GS
Sbjct: 863 MHPEIRAFPSRAFYEGRLRDSESVIAAPPESYHASWPLRPYVLFDASQGKEKR-STVGSV 921
Query: 618 INIDEVDFVLLLFHKLISMYPQLKSSS---QLAIISPYRHQVKQFQERFKETFGVES--- 671
N E V+ L +L + + + AII+PY+ Q + ++ F +G ES
Sbjct: 922 SNPYEALIVVSLVRRLERTLWRKNGETVDGRCAIITPYKAQRSKIRDAFARVYGDESAMH 981
Query: 672 QKVVDITTVDGCQGREKDVAIFSCV-RASDKKSIGFLADYRRMNVGITRAKSSILVVGCA 730
+ + ++TVDG QG+E DV IFS V + + IGFL D +RMNV +TRA+ S+ +VG
Sbjct: 982 RLGIVVSTVDGFQGQEADVIIFSTVRGGAGRGGIGFLQDVKRMNVALTRARRSLWIVGRV 1041
Query: 731 STLREDKHWNNLVKSAEKQDCL 752
L + W +LV A ++ C+
Sbjct: 1042 DALEGNPMWKDLVDDARERGCV 1063
Score = 43.9 bits (102), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 37/60 (61%), Gaps = 2/60 (3%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQKR 434
RVLVCAPSN+A+D ++ R++ G + +Y P I+R+G A ++ + A+ L +R
Sbjct: 566 RVLVCAPSNAAIDNLLERVVKKGFIRGDGTAYRPNIIRVG--ADDAMGADAVSPLYAGER 623
>gi|255082736|ref|XP_002504354.1| predicted protein [Micromonas sp. RCC299]
gi|226519622|gb|ACO65612.1| predicted protein [Micromonas sp. RCC299]
Length = 1248
Score = 205 bits (521), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 146/406 (35%), Positives = 223/406 (54%), Gaps = 47/406 (11%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDEN---IRSYTPKIVRIGL--KAHHSVNSVAIDHL 429
R+L+CAPSN+A+DE+ LR++ TG+ D++ R ++VR+G + H ++ A++ L
Sbjct: 663 RILLCAPSNAAIDELALRMV-TGLLDKDGKKCRMKEGQLVRVGPIDQVSHRMHPHALNTL 721
Query: 430 VEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVII 489
V+ + D + T+K+ D R A +N A IV +T S +G A L++ GFD VII
Sbjct: 722 VDARMDGLVGRR-----TKKEEDRQRKATINSAQIVAATTSAAGGAYLTESGMGFDCVII 776
Query: 490 DEAAQAVEPATLVPLATG-------CKQVFLVGDPVQLPATV-ISPVAEHLGYGTSLFKR 541
DEAAQA E ATL+PL K++ LVGD +QLP T + Y SLF+R
Sbjct: 777 DEAAQASEAATLIPLRHSGGKEQLEAKRLILVGDHMQLPTTAHAEDPSLRKAYAMSLFQR 836
Query: 542 LQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDV-----------EDYTTRDWH 590
L+ A +P L Q+RMH E+ +P++ FY LE+ +D + D H
Sbjct: 837 LE-ASHPAVALTVQHRMHAEIAKWPAKYFYRGELENAADSPTESPFNQCGGDGAVCLDGH 895
Query: 591 EYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIIS 650
+R P++F D H G+E+ A S S +N E V + K + ++++S +A+I+
Sbjct: 896 LFR-LKPYAFLDFH-GEEAVGAQSKSIMNESEAKIVAAVV-KAARKWARVEAS--VAVIT 950
Query: 651 PYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADY 710
PYR Q + + ++ V + TVDG QG+E D+ I SC R K +GFL D
Sbjct: 951 PYREQRELIIKNVDDSS-------VRVGTVDGFQGQEADIVIISCTRT---KQLGFLEDE 1000
Query: 711 RRMNVGITRAKSSILVVGCASTLREDKH-WNNLVKSAEKQDCLFRV 755
RR+NV +TRA+ S+L+VG A +R + W +LV A ++ CL V
Sbjct: 1001 RRLNVALTRARESLLIVGSADFMRRKRGPWKDLVDDAHERGCLHPV 1046
>gi|121701377|ref|XP_001268953.1| regulator of nonsense transcripts, putative [Aspergillus clavatus
NRRL 1]
gi|119397096|gb|EAW07527.1| regulator of nonsense transcripts, putative [Aspergillus clavatus
NRRL 1]
Length = 1079
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 152/453 (33%), Positives = 223/453 (49%), Gaps = 62/453 (13%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNS-VAIDHLVEQK 433
+VLVCAPSN A+D++ R+ TG+ K VR+ K+ V S V L EQ
Sbjct: 471 QVLVCAPSNVAVDQLCERIHRTGL----------KTVRVTAKSREDVESPVGFLSLHEQV 520
Query: 434 R-DDSAADKQKHGATRKD------------RDSIRSA---ILNEAVIVCSTLSFSGSALL 477
R +DS + K + + + RSA ILN A ++C T +G L
Sbjct: 521 RLNDSNIELIKLNQLKAELGELSSQDEKRLKQLTRSAEREILNNADVICCTCVGAGDPRL 580
Query: 478 SKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTS 537
SKL F V+IDE+ Q+ EP ++PL GCKQV LVGD QL +++ A G S
Sbjct: 581 SKLK--FRTVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQS 638
Query: 538 LFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRD----WHEYR 593
LF+RL G L QYRMHP + FPS FY+ +L++G D RD W
Sbjct: 639 LFERLVILGCSPIRLNVQYRMHPCLSQFPSNMFYEGSLQNGVSAIDRLRRDVDFPWPVVD 698
Query: 594 CFGPFSFFDIHEGKESQPAGSGSWINIDE---VDFVLLLFHKLISMYPQLKSSSQLAIIS 650
P F+ + G E A S++N E V+ ++ F K ++PQ + II+
Sbjct: 699 --SPMMFWS-NLGNEEISASGTSYLNRTEATNVEKIVTRFFK-AGVHPQ-----DIGIIT 749
Query: 651 PYRHQVKQFQERFKE--TFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLA 708
PY Q + TF E K +++ +VD QGREKD I SCVR++D + IGFL+
Sbjct: 750 PYEGQRSYIVSSMQANGTFKKEHYKEIEVASVDAFQGREKDFIILSCVRSNDHQGIGFLS 809
Query: 709 DYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDC------------LFRVS 756
D RR+NV +TRAK ++++G L + WN L++ ++Q C L + S
Sbjct: 810 DPRRLNVALTRAKYGLVILGNPKVLSKHPLWNCLLQHFKEQHCLVEGPLSNLQESLIQFS 869
Query: 757 KPYASFFSDENLE---SMRKNATTDNVQGADGH 786
+P ++ + + + N T+ + G +GH
Sbjct: 870 RPKQAYRGPQRFQMAYNHASNVTSGMMNGRNGH 902
>gi|302761080|ref|XP_002963962.1| hypothetical protein SELMODRAFT_438696 [Selaginella moellendorffii]
gi|300167691|gb|EFJ34295.1| hypothetical protein SELMODRAFT_438696 [Selaginella moellendorffii]
Length = 2806
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 122/299 (40%), Positives = 174/299 (58%), Gaps = 16/299 (5%)
Query: 458 ILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLA-TGCKQVFLVGD 516
+L A +VC T+S +G+ ++ + F +IDEA Q VE T + + KQ+ LVGD
Sbjct: 648 LLRHASVVCCTVSSAGTRIVQNTSRHFYTAVIDEAGQLVEAETAIVMGLQNLKQLVLVGD 707
Query: 517 PVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALE 576
QLPATVIS +A+ YG SLF+RLQ G+P ML QYRMHP + FP+ +FY+ A+
Sbjct: 708 HKQLPATVISKIAQDYSYGRSLFERLQLLGHPSIMLNVQYRMHPSISQFPNFQFYEGAIC 767
Query: 577 DGSDVEDYTTRDWHEYRCFGPFSFFDIH--EGKESQPAGSGSWINIDEVDFVLLLFHKLI 634
DG +V D + + FGP++F ++H E K+ + + S + V+ VL++ H L+
Sbjct: 768 DGPNVVDDFYGQLSQSQLFGPYTFLNVHGVETKDEKHSKSNA------VE-VLVVMH-LL 819
Query: 635 SMYPQLKSSSQLAIISPYRHQVKQFQERFKE-TFGVESQKVVDITTVDGCQGREKDVAIF 693
M Q Q+ IISPY QVK +R K G S ++ +VDG QGREKDV I
Sbjct: 820 KMLHQSGEKLQVGIISPYAAQVKAINDRLKSWDHGSLS---INCRSVDGFQGREKDVIIL 876
Query: 694 SCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLR-EDKHWNNLVKSAEKQDC 751
S VR++ +GFL D+RR+NV ITRA+ + +VG A+TL D W L+ A + C
Sbjct: 877 STVRSNVGGYLGFLEDHRRLNVAITRARHVLCIVGNANTLESSDGVWRQLLNDARHRKC 935
Score = 43.1 bits (100), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 111/260 (42%), Gaps = 42/260 (16%)
Query: 58 YKDVDDYLATFEPLLFEEVKAQIIQKKDEEEVQEWKLRLVMECGEA----DGFHLPSVTY 113
+ + +YL+ F PLL EE +A + Q E + E LV E G+ DG
Sbjct: 193 FPALKNYLSVFRPLLLEETRAALQQSL--EMINELPCVLV-EMGKEVPVRDGDDKIRRFK 249
Query: 114 EADEVESISPNDLLLLSKEE------FKEGSTFPTTYAFALVEHCQANLLRLRMYLAGEV 167
+ + P DL+LL+ E ++ F T L + +AG+
Sbjct: 250 MQVSKDILKPKDLVLLTTAEPDCLTILRDSGEFYT----------------LGLIIAGD- 292
Query: 168 IHINKDAVKSQRLLNIHSLITSSVSAVEKRLFSLKICSLSTIAREYLAL-RSVGSLPFKD 226
++ D +K I S + +++ + SL+T R + +L R +L +
Sbjct: 293 -DMDSDELKVDVYAPIDSSEYDPFLETNRPWYAVYLSSLATGMRVWESLKRPSLALASQY 351
Query: 227 LILSASEKSSGSQDQSWKIPGLLHEYIKENH----NASQLEAIHEGLL-----RKAFV-L 276
I +++ + + + + G+ I N SQ+EA+ ++ +K +V L
Sbjct: 352 PIFQEVLQANSGEPEIYDVEGMTSSEISCARWFKLNDSQMEAVSRTVIALKREQKPYVRL 411
Query: 277 IQGPPGTGKTQTILGLLSAI 296
IQGPPGTGKT ++ L+S +
Sbjct: 412 IQGPPGTGKTSMLMALISVL 431
>gi|452820756|gb|EME27794.1| endonuclease [Galdieria sulphuraria]
Length = 712
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 155/518 (29%), Positives = 239/518 (46%), Gaps = 95/518 (18%)
Query: 258 NASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLREIKRGP 317
N SQ A L R+ LIQGPPGTGKT+T+ +L L ++ R P
Sbjct: 266 NESQQTAWKNALERR-LTLIQGPPGTGKTKTLAKIL--------------ASLVQLGRTP 310
Query: 318 ELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNSSRRYRVRVL 377
L Y H DNI+ +EL+ RY + +
Sbjct: 311 ILA--SAYTHIAT-----------DNIL-------------DELE--------RYNIPAI 336
Query: 378 -VCAPSN-------SALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHL 429
+ P+N +LD ++ R + EN++ A++ L
Sbjct: 337 RIGKPANIHRNLWKYSLDSLLERDTRIIEKRENLKK-------------------AMERL 377
Query: 430 VEQKRDDSAA----DKQKHGATRKDRDSIRSA-ILNEAVIVCSTLSFSGSALLSKLNHGF 484
+ KR + D K K + I + IL++ IV ST +G +L N F
Sbjct: 378 AQPKRGKAIGLAHRDYSKSLGQLKQTEMIATKEILDKYPIVLSTCVGAGEEILK--NISF 435
Query: 485 DVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQR 544
VV IDEA Q+ EP L+P+ GC+Q+ L GD QLP T+++P A G SLF+RL R
Sbjct: 436 QVVAIDEATQSHEPGLLIPIIKGCEQLILAGDHYQLPPTILNPEAAESGLSVSLFERLVR 495
Query: 545 AGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR-DWHEYRCFGPFSFFDI 603
+G +L+TQYRMHP + +FPS+ FY L + + W + P +F +
Sbjct: 496 SGVEPYLLRTQYRMHPSIAAFPSQYFYHGLLHSAPCTQSISNYFPWPNPQT--PIAFIPV 553
Query: 604 HEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQ--------LAIISPYRHQ 655
G+E S+ N E V+ +++ + ++S+ + II+PY Q
Sbjct: 554 L-GEEWVTEQGTSYCNPQESQVVIETISQIVENWMTAQNSNHTLQQSFPTIGIITPYAGQ 612
Query: 656 VKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNV 715
++ +R E V++ TVDG QGREKD+ I S VR++ +S+GFL D+RR+NV
Sbjct: 613 MRDIMDRMDRETSTEWLSYVEVKTVDGFQGREKDIIIISTVRSNPSQSLGFLQDWRRLNV 672
Query: 716 GITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLF 753
ITR++S ++V+G A+TL + HW ++ C++
Sbjct: 673 AITRSRSGLIVIGNANTLSRNDHWKRWLEWISHHGCIY 710
>gi|42475934|tpg|DAA01946.1| TPA_exp: senataxin [Mus musculus]
Length = 2646
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 222/800 (27%), Positives = 358/800 (44%), Gaps = 101/800 (12%)
Query: 13 SIF-RFCKIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPL 71
SIF F K +L W Y + DK + R V ++D +Y F PL
Sbjct: 1677 SIFDTFIKEVLKWKYQMFLN-----FDKCGAPTSLCQSISRPVPVRFQDCAEYFNVFLPL 1731
Query: 72 L----FEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADEVESISP--ND 125
+ FE V + + ++E + +LR + E++ + + P ND
Sbjct: 1732 IILNAFETVAQEWLSSPNKENFYQLQLR-KFPADYKKYWEFLIYLNESELAKQLHPKEND 1790
Query: 126 LLLLSKEEF---KEGSTFPTTYAFALVEHCQ-ANLLRLRMYLAGEVIHINKDAVKSQRLL 181
L+ L+ E+ + G + Y V + +++R I S + L
Sbjct: 1791 LVFLAPEKSYMDRHGMQDCSHYYCGYVHKFRRTSVMRSGKAECSLCIQTQDTLPASVKNL 1850
Query: 182 NIHSLITSSVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPF----KDLILSASEKSSG 237
++ SS+ +++L ++ + S +R LA + P KDL+ + SE+
Sbjct: 1851 T-RCIVISSLVTTQRKLKAMSLLS----SRNQLARAVLNPNPMDFCTKDLLTTTSER--- 1902
Query: 238 SQDQSWKIPGLLHEYIKENHNASQLEAI--------HEGLLRKAFVLIQGPPGTGKTQTI 289
+ Y+K+ N Q +AI H + K LI GPPGTGK++TI
Sbjct: 1903 -----------IVAYLKD-FNEDQKKAIETAYAMVKHSPSVAK-ICLIHGPPGTGKSKTI 1949
Query: 290 LGLLSAILHATPARVHSKGGLR-EIKRGPEL---PMHEKYNHWGRASPWLVGANPRDNIM 345
+GLL +L + HS +IK+ L P + + + +D
Sbjct: 1950 VGLLYRLLTENQRKGHSDENFNAKIKQNRVLVCAPSNAAVDELMKKIILEFKEKCKDKKN 2009
Query: 346 PI-DGDDGFFPTTGNE--LKPEVVNSSRRYRVRVLVCAPSNSALDEIVLR--LLNTGIRD 400
P+ + D G E + EV+ S +V + S + E++ R +L+ + D
Sbjct: 2010 PLGNCGDINLVRLGPEKSINTEVLKFSLDSQVNHRMKKDLPSHIQEMLRRKEILDAQL-D 2068
Query: 401 ENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILN 460
E R + R G + I + +++++ ++ K+ G ++ +++I +
Sbjct: 2069 ELSRQRA--LCRGGREMQRQELDEHIAIVSKERQELASKIKEVQGRPQRAQNTI----IL 2122
Query: 461 EAVIVCSTLSFSGSALLSKLNHG-----FDVVIIDEAAQAVEPATLVPLATGCKQVFLVG 515
E+ ++C TLS SG LL G F VI+DEA Q+ E TL PL C ++ LVG
Sbjct: 2123 ESHVICCTLSTSGGLLLESAFRGQGGVPFSCVIVDEAGQSCEVETLSPLIHRCNKLILVG 2182
Query: 516 DPVQLPATVISPVAEHLGYGTSLFKRLQR-----------AGYPVKMLKTQYRMHPEVRS 564
DP QLP TVIS A+ GY S+ R + PV L QYRMHP++
Sbjct: 2183 DPKQLPPTVISMKAQEYGYDQSMMARFCKLLEENVEQNMIGRLPVLQLTIQYRMHPDICL 2242
Query: 565 FPSREFYDEALEDGSDVEDYTTRDWHEYRC-----FGPFSFFDIHEGKESQPAGSGSWIN 619
FPS Y++ L+ T R RC F P+ FD+ +G E + + S+IN
Sbjct: 2243 FPSNYVYNKNLK--------TNRLTESIRCSSEWPFQPYLVFDVGDGSERR--DNDSYIN 2292
Query: 620 IDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITT 679
+ E+ V+ + KLI + S + II+ Y+ Q Q+ ++ F + VD T
Sbjct: 2293 VQEIKLVMEII-KLIKEKRKDISFRNIGIITHYKAQKTMIQKDLEKEFDKKGPAEVD--T 2349
Query: 680 VDGCQGREKDVAIFSCVRASD-KKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKH 738
VD QGR+KD I +CVRAS + SIGFLA +R+NV ITRAK S+ ++G TL E++H
Sbjct: 2350 VDAFQGRQKDCIIVTCVRASAVQGSIGFLASLQRLNVTITRAKYSLFILGHLRTLMENQH 2409
Query: 739 WNNLVKSAEKQDCLFRVSKP 758
W L++ A+K+ + + S P
Sbjct: 2410 WYELIQDAQKRGAIIKTSDP 2429
>gi|113722131|ref|NP_932150.2| probable helicase senataxin [Mus musculus]
gi|160184873|sp|A2AKX3.1|SETX_MOUSE RecName: Full=Probable helicase senataxin; AltName: Full=Amyotrophic
lateral sclerosis 4 protein homolog; AltName: Full=SEN1
homolog
gi|225356476|gb|AAI56404.1| Senataxin [synthetic construct]
Length = 2646
Score = 203 bits (517), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 222/800 (27%), Positives = 358/800 (44%), Gaps = 101/800 (12%)
Query: 13 SIF-RFCKIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPL 71
SIF F K +L W Y + DK + R V ++D +Y F PL
Sbjct: 1677 SIFDTFIKEVLKWKYQMFLN-----FDKCGAPTSLCQSISRPVPVRFQDCAEYFNVFLPL 1731
Query: 72 L----FEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADEVESISP--ND 125
+ FE V + + ++E + +LR + E++ + + P ND
Sbjct: 1732 IILNAFETVAQEWLSSPNKENFYQLQLR-KFPADYKKYWEFLIYLNESELAKQLHPKEND 1790
Query: 126 LLLLSKEEF---KEGSTFPTTYAFALVEHCQ-ANLLRLRMYLAGEVIHINKDAVKSQRLL 181
L+ L+ E+ + G + Y V + +++R I S + L
Sbjct: 1791 LVFLAPEKSYMDRHGMQDCSHYYCGYVHKFRRTSVMRSGKAECSLCIQTQDTLPASVKNL 1850
Query: 182 NIHSLITSSVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPF----KDLILSASEKSSG 237
++ SS+ +++L ++ + S +R LA + P KDL+ + SE+
Sbjct: 1851 T-RCIVISSLVTTQRKLKAMSLLS----SRNQLARAVLNPNPMDFCTKDLLTTTSER--- 1902
Query: 238 SQDQSWKIPGLLHEYIKENHNASQLEAI--------HEGLLRKAFVLIQGPPGTGKTQTI 289
+ Y+K+ N Q +AI H + K LI GPPGTGK++TI
Sbjct: 1903 -----------IVAYLKD-FNEDQKKAIETAYAMVKHSPSVAK-ICLIHGPPGTGKSKTI 1949
Query: 290 LGLLSAILHATPARVHSKGGLR-EIKRGPEL---PMHEKYNHWGRASPWLVGANPRDNIM 345
+GLL +L + HS +IK+ L P + + + +D
Sbjct: 1950 VGLLYRLLTENQRKGHSDENFNAKIKQNRVLVCAPSNAAVDELMKKIILEFKEKCKDKKN 2009
Query: 346 PI-DGDDGFFPTTGNE--LKPEVVNSSRRYRVRVLVCAPSNSALDEIVLR--LLNTGIRD 400
P+ + D G E + EV+ S +V + S + E++ R +L+ + D
Sbjct: 2010 PLGNCGDINLVRLGPEKSINTEVLKFSLDSQVNHRMKKDLPSHIQEMLRRKEILDAQL-D 2068
Query: 401 ENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILN 460
E R + R G + I + +++++ ++ K+ G ++ +++I +
Sbjct: 2069 ELSRQRA--LCRGGREMQRQELDEHIAIVSKERQELASKIKEVQGRPQRAQNTI----IL 2122
Query: 461 EAVIVCSTLSFSGSALLSKLNHG-----FDVVIIDEAAQAVEPATLVPLATGCKQVFLVG 515
E+ ++C TLS SG LL G F VI+DEA Q+ E TL PL C ++ LVG
Sbjct: 2123 ESHVICCTLSTSGGLLLESAFRGQGGVPFSCVIVDEAGQSCEVETLSPLIHRCNKLILVG 2182
Query: 516 DPVQLPATVISPVAEHLGYGTSLFKRLQR-----------AGYPVKMLKTQYRMHPEVRS 564
DP QLP TVIS A+ GY S+ R + PV L QYRMHP++
Sbjct: 2183 DPKQLPPTVISMKAQEYGYDQSMMARFCKLLEENVEQNMIGRLPVLQLTIQYRMHPDICL 2242
Query: 565 FPSREFYDEALEDGSDVEDYTTRDWHEYRC-----FGPFSFFDIHEGKESQPAGSGSWIN 619
FPS Y++ L+ T R RC F P+ FD+ +G E + + S+IN
Sbjct: 2243 FPSNYVYNKNLK--------TNRLTESIRCSSEWPFQPYLVFDVGDGSERR--DNDSYIN 2292
Query: 620 IDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITT 679
+ E+ V+ + KLI + S + II+ Y+ Q Q+ ++ F + VD T
Sbjct: 2293 VQEIKLVMEII-KLIKEKRKDISFRNIGIITHYKAQKTMIQKDLEKEFDKKGPAEVD--T 2349
Query: 680 VDGCQGREKDVAIFSCVRASD-KKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKH 738
VD QGR+KD I +CVRAS + SIGFLA +R+NV ITRAK S+ ++G TL E++H
Sbjct: 2350 VDAFQGRQKDCIIVTCVRASAVQGSIGFLASLQRLNVTITRAKYSLFILGHLRTLMENQH 2409
Query: 739 WNNLVKSAEKQDCLFRVSKP 758
W L++ A+K+ + + S P
Sbjct: 2410 WYELIQDAQKRGAIIKTSDP 2429
>gi|307108218|gb|EFN56459.1| hypothetical protein CHLNCDRAFT_57676 [Chlorella variabilis]
Length = 670
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 95/212 (44%), Positives = 134/212 (63%), Gaps = 2/212 (0%)
Query: 554 TQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAG 613
QYRMHP +R FPS FY L DG V T R WH F P F D+ +G ES P+G
Sbjct: 389 AQYRMHPAIREFPSLNFYGGGLRDGPGVAQDTRRPWHACPAFQPLVFIDV-KGTESVPSG 447
Query: 614 SGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQK 673
S S +N E + VL ++ +L +PQL + +A+ISPY+ QV + F+ G E+ K
Sbjct: 448 SSSLVNEREAEMVLQMYRELRHRHPQLATQPSVAVISPYKAQVSLLRRLFRAALGEEAAK 507
Query: 674 VVDITTVDGCQGREKDVAIFSCVRAS-DKKSIGFLADYRRMNVGITRAKSSILVVGCAST 732
+VDI T+DG QGREKD+A FS VR+ + IGF+AD RR+NVG+TRA++S++VVG +
Sbjct: 508 MVDINTIDGFQGREKDIAFFSTVRSQRGSRGIGFVADERRINVGLTRARASLIVVGHVES 567
Query: 733 LREDKHWNNLVKSAEKQDCLFRVSKPYASFFS 764
L+ + W+ LV A K C++R +KP++ + S
Sbjct: 568 LQSNPRWSALVSHARKSKCMYRAAKPFSGWVS 599
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/142 (39%), Positives = 80/142 (56%), Gaps = 10/142 (7%)
Query: 324 KYNHWGRASPWLVGANPRDNIMPID-GDDGFFPTTGNELKPEVVNSSRRYRVRVLVCAPS 382
++ WGR V A R+ ++P++ D G P + +S+ + RVLVCAPS
Sbjct: 256 RWGSWGRE----VDAG-REVVVPVESADPGDAFGLLRRCIPRRIGASQGPKARVLVCAPS 310
Query: 383 NSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQKRDDSAADKQ 442
NSALDEIVLRL+ G+ D+ R +TP +VR+G+ HHSV SVA+D LV + A
Sbjct: 311 NSALDEIVLRLITLGLTDQAGRVFTPNVVRVGVSIHHSVQSVALDTLVAHRLGGDAVKS- 369
Query: 443 KHGATRKDRDSIRSAILNEAVI 464
+++ +R AIL EA I
Sbjct: 370 ---VAGWEKERLRMAILEEANI 388
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 120/266 (45%), Gaps = 35/266 (13%)
Query: 18 CKIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVK 77
C I+L WDY+ L + + ++ L + + V++Y+ F PLL EE
Sbjct: 3 CNILLSWDYWELERRMADGGGPIAE--------LPTIPQQFSSVEEYVRVFGPLLLEECA 54
Query: 78 AQIIQKKDEEEVQEWKLRLVMEC--GEADGFHLPSVTYEADEVESISPNDLLLLSKEEFK 135
AQ+++ ++E +V + +V D + +T A S+ ND+LL+S++ +
Sbjct: 55 AQLLRGQEEGQVLTSQRAVVAAARLRPEDESLVVRLTLPAGATSSLHENDMLLVSRDSPE 114
Query: 136 EGSTFPTT-----------------YAFALVE-HCQANLLRLRMYLAGEVIHINKDAVKS 177
+ +A ++E H +R+R L + N+ ++
Sbjct: 115 ARAGGGAARGPACGGGEEEQGDELHHALGVMEGHEGDQSVRVRFRLTDDGQAGNERGLQR 174
Query: 178 QRLLNIHSLITSSVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSS- 236
R + S++ + R ++LK+ S+STI RE+ A+ V +P ++++L+A S
Sbjct: 175 ARAMR------GSLARTDSRWWALKLSSMSTIIREWAAIHCVAHMPLREVLLTAQPSQSL 228
Query: 237 GSQDQSWKIPGLLHEYIKENHNASQL 262
+ ++P + +++ +N SQ+
Sbjct: 229 LAARGRLEVPPQMRATMQKTYNDSQV 254
>gi|73967706|ref|XP_537811.2| PREDICTED: probable helicase senataxin isoform 1 [Canis lupus
familiaris]
Length = 2693
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 145/458 (31%), Positives = 221/458 (48%), Gaps = 86/458 (18%)
Query: 375 RVLVCAPSNSALDEIVLRLL---------------NTG----IRDENIRSYTPKIVRIGL 415
RVLVCAPSN+A+DE++ +++ N G +R +S ++++ L
Sbjct: 2018 RVLVCAPSNAAVDELMKKIILEFKEKCKDKKNPLGNCGDINLVRLGPEKSINNEVLKFSL 2077
Query: 416 --KAHHSVNSVAIDHLVEQKRDDSAADKQ------------------------KHGATRK 449
+ +H + H+ E R D+Q K K
Sbjct: 2078 DSQVNHRMKKDLPSHVQEMHRRKEFLDRQLDELSRQRALCRGGREIQRQELDEKIAKVSK 2137
Query: 450 DRDSI--------------RSAILNEAVIVCSTLSFSGSALLSKLNHG-----FDVVIID 490
+R + +S I+ E+ ++C TLS SG LL G F VI+D
Sbjct: 2138 ERQELASKIKEVQGRPQKTQSIIILESHVICCTLSTSGGLLLESAFRGQGGVPFSCVIVD 2197
Query: 491 EAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQR------ 544
EA Q+ E TL PL C ++ LVGDP QLP TVIS A+ GY S+ R +
Sbjct: 2198 EAGQSCEVETLTPLIHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMARFYKLLEDNV 2257
Query: 545 -----AGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVE-DYTTRDWHEYRCFGPF 598
PV L QYRMHP++ FPS Y+ +L+ E + + DW F P+
Sbjct: 2258 EHNMIGRLPVLQLTVQYRMHPDICLFPSNYVYNRSLKTNRQTETNRCSSDWP----FQPY 2313
Query: 599 SFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQ 658
FD+ +G E + + S++N+ E+ V+ + KLI + + + II+ Y+ Q
Sbjct: 2314 LVFDVGDGSERR--DNDSYVNVQEIKLVMEII-KLIKDKRRDVTFRNIGIITHYKAQKTM 2370
Query: 659 FQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKK-SIGFLADYRRMNVGI 717
Q+ + F + VD TVDG QGR+KD I +CVRA+ + SIGFLA +R+NV I
Sbjct: 2371 IQKDLDKEFDRKGPAEVD--TVDGFQGRQKDCVIVTCVRANAMQGSIGFLASLQRLNVTI 2428
Query: 718 TRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRV 755
TRAK S+ ++G TL E++HWN+L++ A+K+ + +
Sbjct: 2429 TRAKYSLFILGHLRTLMENQHWNHLIQDAQKRGAIIKT 2466
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 122/323 (37%), Gaps = 66/323 (20%)
Query: 17 FCKIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLL---- 72
F K IL W Y V D+ + R V ++D DY F PL+
Sbjct: 1717 FVKEILKWKYEMFVN-----FDQCGPPASLCQSISRPVPVRFQDCGDYFNVFFPLMILNT 1771
Query: 73 FEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADEVE---SISP--NDLL 127
FE V + I ++E+ + LR AD +E E + P NDL+
Sbjct: 1772 FETVAQEWISSPNKEKFYQLHLRKF----PADYKKYWEFVVHLEECELAKQLHPKENDLV 1827
Query: 128 LLSKEEFKEGSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAV----KSQRLLNI 183
L E + G T + + LR Y G V + +V KS+ L I
Sbjct: 1828 FLISER-QNGEKKDTE---------RNRMQDLREYHCGYVHKFRRTSVMRNGKSECFLYI 1877
Query: 184 HS--------------LITSSVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPF----K 225
+ ++ SS+ +++L ++ + S R LA + P K
Sbjct: 1878 QTQDNLPVNLNEFVKCVVISSLVTTQRKLKAMSLLS----GRNQLARAVLNPNPMDFCTK 1933
Query: 226 DLILSASEKSSGSQDQSWKIPGLLHEYIKENHNA--SQLEAIHEGLLRKAFVLIQGPPGT 283
DL+ + SE+ I L ++ ++ A + + LI GPPGT
Sbjct: 1934 DLLTTTSER----------IVAYLRDFNEDQKKAIETAYAMVKHSPSVAKICLIHGPPGT 1983
Query: 284 GKTQTILGLLSAILHATPARVHS 306
GK++TI+GLL +L + HS
Sbjct: 1984 GKSKTIVGLLYRLLTENQRKGHS 2006
>gi|145491971|ref|XP_001431984.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124399091|emb|CAK64586.1| unnamed protein product [Paramecium tetraurelia]
Length = 935
Score = 203 bits (516), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 135/407 (33%), Positives = 211/407 (51%), Gaps = 30/407 (7%)
Query: 370 RRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIG---LKAHHSVNSVAI 426
++ R ++LVCAPSN +D++ ++ TG++ + S T + V L H V S+ I
Sbjct: 420 QKQRGQILVCAPSNIVVDQLAEKINKTGVKVVRLCSKTRESVSTNIEFLTLHSQVRSLDI 479
Query: 427 DH---------LVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALL 477
L++Q+ + D+Q + RD I+ +A I+C+T S L
Sbjct: 480 PQYHQLQAFYELLDQQGELDQKDEQ---VFIRMRDEAEKEIIEQADIICTTCIGSADKRL 536
Query: 478 SKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTS 537
++ F V+IDEA QA+EP L+P+ G K V LVGD QL V S A +G S
Sbjct: 537 KEMRFLF--VLIDEATQAIEPECLLPMLKGAKHVILVGDHRQLGPVVQSREAASVGLDRS 594
Query: 538 LFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYT---TRDWHEYRC 594
LF+RL + G L+ QYRMHPE+ FPS FY+ L++G + D T W +
Sbjct: 595 LFERLVQLGIRPVRLQVQYRMHPELTVFPSNTFYEGTLQNGVTISDRTHSGNFPWPNKQ- 653
Query: 595 FGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRH 654
P F ++ G+E A S++N E + + + +Y +++ II+PY+
Sbjct: 654 -KPMIFINV-TGQEQLSASGTSYLNTQE---AVAVEQAVYYLYQNTVKLNKIGIITPYKG 708
Query: 655 Q---VKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYR 711
Q + + +R + + +++ +VDG QGREKD I SCVR++D + IGFL + R
Sbjct: 709 QRTYILSYLQRNGQ-LPYNQYRDIEVASVDGFQGREKDFIIISCVRSNDTQGIGFLTNPR 767
Query: 712 RMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRVSKP 758
R+NV ITRA+ ++V+G A L +D WNN++ + D L S P
Sbjct: 768 RLNVTITRARYGLIVIGNARVLSKDNLWNNMLNHFKDLDLLMEGSLP 814
>gi|355718810|gb|AES06392.1| senataxin [Mustela putorius furo]
Length = 1702
Score = 203 bits (516), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 146/461 (31%), Positives = 222/461 (48%), Gaps = 89/461 (19%)
Query: 375 RVLVCAPSNSALDEIVLRLL---------------NTG----IRDENIRSYTPKIVRIGL 415
RVLVCAPSN+A+DE++ +++ N G +R +S ++++ L
Sbjct: 1029 RVLVCAPSNAAVDELMKKIILEFKEKCKDKKNPLGNCGDINLVRLGPEKSINNEVLKFSL 1088
Query: 416 --KAHHSVNSVAIDHLVEQKRDDSAADKQKHGATR------------------------K 449
+ +H + H+ E R D+Q +R K
Sbjct: 1089 DSQVNHRMKKDLPSHVQEMHRRKEFLDRQLDELSRQRALCRGGREMQRQELDEEIAKVSK 1148
Query: 450 DRDSI--------------RSAILNEAVIVCSTLSFSGSALLSKLNHG-----FDVVIID 490
+R + +S I+ E+ ++C TLS SG LL G F VI+D
Sbjct: 1149 ERQELASKIKEVQGRPQKTQSIIILESHVICCTLSTSGGLLLESAFRGQGGVPFSCVIVD 1208
Query: 491 EAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQR------ 544
EA Q+ E TL PL C ++ LVGDP QLP TVIS A+ GY S+ R +
Sbjct: 1209 EAGQSCEVETLTPLIHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMARFYKLLEDSV 1268
Query: 545 --------AGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVE-DYTTRDWHEYRCF 595
G PV L QYRMHP++ FPS Y+ +L+ E + DW F
Sbjct: 1269 EHSVVGRLPGLPVLQLTVQYRMHPDICLFPSSYVYNRSLKTSRQTETSRCSSDWP----F 1324
Query: 596 GPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQ 655
P+ FD+ +G E + + S++N+ E+ V+ + KLI + + + II+ Y+ Q
Sbjct: 1325 QPYLVFDVGDGSERR--DNDSYVNVQEIKLVMEII-KLIKDKRRDVTFRNIGIITHYKAQ 1381
Query: 656 VKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASD-KKSIGFLADYRRMN 714
Q+ + F + VD TVDG QGR+KD I +CVRA+ + SIGFLA +R+N
Sbjct: 1382 KTMIQKDLDKEFDRKGPAEVD--TVDGFQGRQKDCVIVTCVRANTVQGSIGFLASLQRLN 1439
Query: 715 VGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRV 755
V ITRAK S+ ++G TL E++HWN+L++ A+K+ + +
Sbjct: 1440 VTITRAKYSLFILGHLRTLMENQHWNHLIQDAQKRGAIIKT 1480
>gi|326677548|ref|XP_690945.4| PREDICTED: probable helicase senataxin [Danio rerio]
Length = 2310
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 156/484 (32%), Positives = 236/484 (48%), Gaps = 110/484 (22%)
Query: 369 SRRYRVRVLVCAPSNSALDEIVLRLL---------------NTG----IRDENIRSYTPK 409
S+ R RVL+CAPSN+A+D ++ +++ N G +R N R+ +
Sbjct: 1691 SKSRRTRVLLCAPSNAAIDSLMKKVILIFKEKCRNINAPQGNCGDINLVRLGNERTISKS 1750
Query: 410 IVRIGL---------KAHHSV---------------------------NSVAIDHLVEQK 433
+ L +A +V NS +L+EQK
Sbjct: 1751 LKPFSLDHQTKARAQRAQQTVESDVHRRKEQLDQMIENLSHQCAKTQKNSTEFKNLLEQK 1810
Query: 434 RDDSAADKQKHGATRK------DRDSIRSAILNEAVIVCSTLSFSGSALLS----KLNH- 482
+ K++ G +R+ R ++ +L A ++C TLS SGS +L +L H
Sbjct: 1811 KQ---FLKEREGLSRQIKECRGRRQESQALVLQNAHVICCTLSTSGSIVLENAFRRLGHE 1867
Query: 483 GFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRL 542
F VIIDEA+QA E TL+P+ C V LVGDP QLP TV+S A+ G+ SL RL
Sbjct: 1868 PFSCVIIDEASQAKETETLIPMLYRCPSVILVGDPNQLPPTVVSQKAKEFGFDQSLMARL 1927
Query: 543 QRAGY-------PVKMLKTQYRMHPEVRSFPSREFYDEALED---GSDVEDYTTRDWHEY 592
++ + P+ +L QYRMHP++ FPS+ Y+ AL++ G ++ R E+
Sbjct: 1928 CKSLHPSNSKLPPILLLSMQYRMHPDICEFPSKYIYNSALKNDWQGQCRQEQEIRTVSEF 1987
Query: 593 R--------C--------------FGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
R C F P+ FD+ +G+E++ S+IN EV V LL
Sbjct: 1988 RLLRSLSGPCVCETAQKRCSLSWPFKPYKVFDVMDGRETK--ERDSFINHKEVSLVGLLL 2045
Query: 631 HKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDV 690
L + + ++ +I+PY Q + + K T G+ Q V++ TVDG QGRE D
Sbjct: 2046 KLLCK-----EQAVRVGVITPYNAQKHRILDAIK-TSGINKQLQVEVDTVDGFQGREMDC 2099
Query: 691 AIFSCVRASDKK-SIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQ 749
I SCVRAS + SIGF+ + +RMNV ITRAK S+ ++G TLRE W L++ A ++
Sbjct: 2100 IIVSCVRASSEMGSIGFVGNRQRMNVTITRAKFSLFILGHLRTLREQSDWGALIEDAGRR 2159
Query: 750 DCLF 753
+C+
Sbjct: 2160 ECII 2163
Score = 43.9 bits (102), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 130/309 (42%), Gaps = 45/309 (14%)
Query: 21 ILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLL----FEEV 76
IL W+Y L + +D +L L+EV + +Y T PLL FEE+
Sbjct: 1409 ILKWEYRML-----DNYKAFGSPLDLCQLPLKEVPVNFSSYLEYFNTLYPLLLINAFEEM 1463
Query: 77 KAQIIQKKDEEEVQEWKLRLVMECG-------EADGFHLPSVTYEADEVESISP--NDLL 127
E ++E +++L ++ A + ++ E D V+ I P +DL+
Sbjct: 1464 A--------NEWLKEGRVKLYLKVQGIEYSNRTASASFIAGLSQECD-VKQIYPKEDDLV 1514
Query: 128 LLSKEEFKEGSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLI 187
LL + T A+A E +L Y++ + +N+ S+ LN+
Sbjct: 1515 LLWLPD--------NTGAYAQDEPNFHDLHPHFGYVSRSNV-LNRTP-GSRSTLNLTIQT 1564
Query: 188 TSSVSAVEKRLFSLKIC-SLSTIAREYLALRSVGSLP-FKDLILSASEKSSGSQDQSWKI 245
+VS+V + ++ SL +I RE+ AL + + P + L+ + S D +
Sbjct: 1565 RGNVSSVNSQPVLCEVVGSLISIFREFRALCLLRNGPMLRPLLAPHVSFFTHSLDGPSDL 1624
Query: 246 PGLLHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAIL------HA 299
+ A + IH F+LI GPPGTGK++TI GLL +L A
Sbjct: 1625 DAPEFNRDQARAIACGIAMIHRKQKTPKFLLIHGPPGTGKSKTIGGLLYKLLSSATNSSA 1684
Query: 300 TPARVHSKG 308
T +HSK
Sbjct: 1685 TVGNLHSKS 1693
>gi|116197821|ref|XP_001224722.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88178345|gb|EAQ85813.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 1071
Score = 202 bits (514), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 141/412 (34%), Positives = 213/412 (51%), Gaps = 45/412 (10%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSV-NSVAIDHLVEQK 433
+VLVCAPSN A+D++ R+ TG+ K+VR+ K+ V +SV+ L EQ
Sbjct: 478 QVLVCAPSNVAVDQLCERIHRTGL----------KVVRLTAKSREDVESSVSFLALHEQV 527
Query: 434 R-DDSAADKQKHGATRKDRDSIRSA---------------ILNEAVIVCSTLSFSGSALL 477
R +DS + K + D+ + S ILN A +VC T +G L
Sbjct: 528 RMNDSNTELTKLARLKADQGELSSQDEKKFKQLTRAAEREILNNADVVCCTCVGAGDPRL 587
Query: 478 SKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTS 537
SK+ F V+IDE+ Q+ EP ++PL GCKQV LVGD QL +++ A G S
Sbjct: 588 SKMK--FRNVLIDESTQSAEPECMIPLVLGCKQVVLVGDHKQLGPVIMNKKAAKAGLNQS 645
Query: 538 LFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVED--YTTRDWHEYRCF 595
LF+RL + + L QYRMHP + FPS FYD +L++G V + T D+
Sbjct: 646 LFERLVKLNFTPIRLNVQYRMHPCLSKFPSNMFYDGSLQNGVTVSERLRTDVDFPWPVAD 705
Query: 596 GPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQ---LAIISPY 652
P F+ + G E A S++N E V K+++ + LK+ + + +I+PY
Sbjct: 706 TPMMFWS-NLGNEEISASGTSYLNRTEAANV----EKIVTRF--LKAGVKALDIGVITPY 758
Query: 653 RHQVKQFQERFKE--TFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADY 710
Q + TF E+ K V++ +VD QGREKD + SCVR++D + IGFL+D
Sbjct: 759 EGQRSYIVSTMQNTGTFKKETYKEVEVASVDAFQGREKDFIVLSCVRSNDNQGIGFLSDP 818
Query: 711 RRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRVSKPYASF 762
RR+NV +TRAK ++++G L + + W++L+ +DC V P +
Sbjct: 819 RRLNVALTRAKYGLVIIGNPKVLSKHELWHHLL--VHFKDCKCLVEGPLTNL 868
>gi|440632949|gb|ELR02868.1| regulator-nonsense transcripts 1 [Geomyces destructans 20631-21]
Length = 1099
Score = 202 bits (513), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 146/480 (30%), Positives = 230/480 (47%), Gaps = 63/480 (13%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSV-NSVAIDHLVEQK 433
+VLVCAPSN A+D++ R+ TG+ K+VR+ K+ V +SV L EQ
Sbjct: 496 QVLVCAPSNVAVDQLCERIHRTGL----------KVVRLTAKSREDVESSVGFLSLHEQV 545
Query: 434 R-DDSAADKQKHGATRKDRDSIRSA---------------ILNEAVIVCSTLSFSGSALL 477
R +DS + K + + + S ILN A ++C T +G L
Sbjct: 546 RMNDSNLELTKLSQLKSELGELSSQDEKKFKSLTRAAEREILNNADVICCTCVGAGDPRL 605
Query: 478 SKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTS 537
SK+ F V+IDE+ Q+ EP ++PL GCKQV LVGD QL +++ A G S
Sbjct: 606 SKMK--FRTVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQS 663
Query: 538 LFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFG- 596
LF+RL G L QYRMHP + FPS FY+ +L++G ++ RD G
Sbjct: 664 LFERLVILGLAPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGVTMQQRLRRDVDFPWPVGD 723
Query: 597 -PFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQ 655
P F+ + G E A S++N E V + + Q + + +I+PY Q
Sbjct: 724 TPMMFWS-NLGNEEISASGTSYLNRTEASNVEKIVTRFFKAGVQ---PADIGVITPYEGQ 779
Query: 656 VKQFQERFKE--TFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRM 713
+ TF E+ K +++ +VD QGREKD + SCVR++D + IGFL+D RR+
Sbjct: 780 RSYVVSSMQNTGTFKKENYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGFLSDPRRL 839
Query: 714 NVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDC------------LFRVSKPYAS 761
NV +TRAK ++++G L + W+ L++ ++++C L + S+P +
Sbjct: 840 NVALTRAKYGLVILGNPKVLSKHPLWHYLLQHFKERNCLVEGPLTNLQTSLLQFSRPKTT 899
Query: 762 FFSDENLE-----SMRKNATTDNVQGAD---------GHVPHDDETMHYANTGDADQGQA 807
+ + + + NA N + + G++P D ++H + G G A
Sbjct: 900 YRGPQRYQMSYSTGLPSNARPPNGKTGNDYSDAGSMLGYIPDDVSSVHSSALGGVGVGSA 959
>gi|224008879|ref|XP_002293398.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220970798|gb|EED89134.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 1178
Score = 201 bits (512), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 122/340 (35%), Positives = 174/340 (51%), Gaps = 43/340 (12%)
Query: 434 RDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAA 493
RD +A A R + + IL+ IV +TL +G+ L N F+VV+IDEAA
Sbjct: 829 RDAAAEFSGNSYAMNNARYQLETHILDSVHIVMTTLGTAGNRALEAANK-FEVVVIDEAA 887
Query: 494 QAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLK 553
Q+VEP+TL L G LVGDP Q RL+ AG+ V+ML
Sbjct: 888 QSVEPSTLAGLQLGSSHAILVGDPQQ---------------------RLEEAGHAVQMLD 926
Query: 554 TQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRD------WHEYRCFGPFSFFDIHEGK 607
TQYRMHP + FP R FYD L DG +V+ + + ++ F PF+ D+ +
Sbjct: 927 TQYRMHPAISDFPRRIFYDGKLLDGPNVKHPEFGNPLKRAVFKKFPAFQPFTVLDLESSE 986
Query: 608 ESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAI------------ISPYRHQ 655
E G S N E L LF+ L + L S S++A+ I+PY Q
Sbjct: 987 ER---GGTSLANSAEAQLALHLFNNLRNGTGGLSSKSRVAVPHYLSHLIGISQITPYAQQ 1043
Query: 656 VKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNV 715
+ F + G E +++V++ TVD QGRE ++ IFSCVRA+ K IGFL+D RRMNV
Sbjct: 1044 AALLRRTFGDALGAEYERLVEVNTVDAFQGREANIVIFSCVRAAGSKGIGFLSDVRRMNV 1103
Query: 716 GITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRV 755
+TRAK+ V+ S++ + +W +LV+ A + D + V
Sbjct: 1104 ALTRAKNFFFVIARCSSIIVNPYWRDLVEHARETDAVIEV 1143
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 116/448 (25%), Positives = 184/448 (41%), Gaps = 130/448 (29%)
Query: 56 DTYKDVDDYLATFEPLLFEEVKAQIIQKKDEEEVQEWK-------LRLVM--------EC 100
DT++ +Y A + PL EE +AQ++ E + WK LR+ +
Sbjct: 324 DTFQSYREYCALWAPLCLEEARAQLLSDAITE-IPYWKSKPEKNPLRVTLLPLKKDLDGS 382
Query: 101 GEADGFHLPSVTYEADEVESISPNDLLLLSKEE-------------FKEGSTFPTTYAFA 147
E G + V S ND++LL K E K+ ST +T
Sbjct: 383 SENMGVQVKKVLTPDFMDRSFIANDVVLLVKSESLLWDATKGTLGDIKQQSTSSSTIVGV 442
Query: 148 LVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSAVEKRLFSLKI-CSL 206
+ N+ R + G VI +++ N+ S I S+ + LK+ C++
Sbjct: 443 I-----GNIEHTRRSVDGLVIQVSR---------NLWSQIASN------EMILLKVGCNI 482
Query: 207 STIAREYLALRSVGSLPFKDLILSA---------SEK----------SSGSQDQSWK--- 244
+++ RE+ AL + S+P + IL +EK SS +++ K
Sbjct: 483 TSL-REFTALCRMDSIPLLEYILGTKMNYAANETAEKGLTIEDNDVDSSPEKEKQAKKEI 541
Query: 245 ---IPGL------LHEYIKENHNASQLEAI----HEGLLRKAFVLIQGPPGTGKTQTILG 291
I G+ EY N SQL+AI HE F LI+GPPGTGKT T+
Sbjct: 542 LEDIGGVEALGKGFAEYASHKFNLSQLKAIASSAHE-YGGGGFTLIKGPPGTGKTTTLCA 600
Query: 292 LLSAILHATPARVHSKGGLREIKR--GPELPMHEKYNHWGRASPWLVGANPRDNIMPIDG 349
LL+A LH +R++ + G + E Y+ +VG ++
Sbjct: 601 LLNA-LH-----------IRQMNQYFGEVKTLAESYDA-------VVGKRASQSL----- 636
Query: 350 DDGFFPTTGNELKPEVVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPK 409
+S+ + R R+LVCAPSN+A+D ++L+++ G D + Y P
Sbjct: 637 -----------------SSALKKRPRILVCAPSNAAVDNVILKIMEDGFIDGHGCRYNPS 679
Query: 410 IVRIGLKAHHSVNSVAIDHLVEQKRDDS 437
IVRIG SV V ++ V+ D+
Sbjct: 680 IVRIGSGQSVSVKDVCLEEKVDTYLSDA 707
>gi|302769075|ref|XP_002967957.1| hypothetical protein SELMODRAFT_408911 [Selaginella moellendorffii]
gi|300164695|gb|EFJ31304.1| hypothetical protein SELMODRAFT_408911 [Selaginella moellendorffii]
Length = 2870
Score = 201 bits (512), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 121/299 (40%), Positives = 173/299 (57%), Gaps = 16/299 (5%)
Query: 458 ILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLA-TGCKQVFLVGD 516
+L A +VC T+S +G ++ + F +IDEA Q VE T + + KQ+ LVGD
Sbjct: 648 LLRHASVVCCTVSSAGMRIVQNTSRHFYTAVIDEAGQLVEAETAIVMGLQNVKQLVLVGD 707
Query: 517 PVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALE 576
QLPATVIS +A+ YG SLF+RLQ G+P ML QYRMHP + FP+ +FY+ A+
Sbjct: 708 HKQLPATVISKIAQDYSYGRSLFERLQLLGHPSIMLNVQYRMHPSISQFPNFQFYEGAIC 767
Query: 577 DGSDVEDYTTRDWHEYRCFGPFSFFDIH--EGKESQPAGSGSWINIDEVDFVLLLFHKLI 634
DG +V D + + FGP++F ++H E K+ + + S + V+ VL++ H L+
Sbjct: 768 DGPNVVDDFYGQLSQSQLFGPYTFLNVHGVETKDEKHSKSNA------VE-VLVVMH-LL 819
Query: 635 SMYPQLKSSSQLAIISPYRHQVKQFQERFKE-TFGVESQKVVDITTVDGCQGREKDVAIF 693
M Q ++ IISPY QVK +R K G S ++ +VDG QGREKDV I
Sbjct: 820 KMLHQSGEKLEVGIISPYAAQVKAINDRLKSWDHGSLS---INCRSVDGFQGREKDVIIL 876
Query: 694 SCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLR-EDKHWNNLVKSAEKQDC 751
S VR++ +GFL D+RR+NV ITRA+ + +VG A+TL D W L+ A + C
Sbjct: 877 STVRSNVGGYLGFLEDHRRLNVAITRARHVLCIVGSANTLESSDGVWRQLLNDARHRKC 935
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 111/264 (42%), Gaps = 50/264 (18%)
Query: 58 YKDVDDYLATFEPLLFEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGF----HLPSVTY 113
+ D+ +YL+ F PLL EE +A + Q E + E LV E G +
Sbjct: 193 FPDLKNYLSVFRPLLLEETRAALQQSL--EMINELPCVLVEMGKEVRGRDGDDKIRRFKM 250
Query: 114 EADEVESISPNDLLLLSKEE------FKEGSTFPTTYAFALVEHCQANLLRLRMYLAGEV 167
+ + + + P DL+LL+ E ++ F Y AL+ +AG+
Sbjct: 251 QISK-DILKPKDLVLLTTAEPDCLTILRDSGEF---YTLALI-------------IAGD- 292
Query: 168 IHINKDAVKSQRLLNIHSLITSSVSAVEKRLFSLKICSLSTIAREYLALRS-----VGSL 222
++ D +K I+S + +++ + SL+T R + AL+ G
Sbjct: 293 -DMDSDELKVDVYAPIYSSEYDPFLETNRPWYAVYLSSLATGMRVWEALKRPSLALAGQY 351
Query: 223 PFKDLILSASEKSSGSQDQSWKIPGLLHEYIKENH----NASQLEAIHEGLL-----RKA 273
P +L A+ D + G+ I N SQ+EA+ ++ +K
Sbjct: 352 PIFQEVLQANSGEPEIDD----VEGMTSSEISCARWFKLNDSQMEAVSRTVIALKREQKP 407
Query: 274 FV-LIQGPPGTGKTQTILGLLSAI 296
+V LIQGPPGTGKT ++ L+S +
Sbjct: 408 YVRLIQGPPGTGKTSMLIALISVL 431
>gi|145342493|ref|XP_001416216.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576441|gb|ABO94509.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 795
Score = 201 bits (512), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 121/315 (38%), Positives = 178/315 (56%), Gaps = 14/315 (4%)
Query: 442 QKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATL 501
Q + R+ + I ++ ++EA IVC TL+ +L+ + F +IIDEA QA E +TL
Sbjct: 478 QNMCSFRQISEHISASFVDEAEIVCCTLTSIKRHVLAS-SRPFKTIIIDEACQANELSTL 536
Query: 502 VPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPE 561
+P+ LVGDP QLPATV S A+ + SLF+RL AG +L QYRMHP+
Sbjct: 537 IPMTLSNAHCVLVGDPKQLPATVKSLNAKQAKFDRSLFERLMVAGMRCNLLTVQYRMHPQ 596
Query: 562 VRSFPSREFYDEALEDGSDVEDYTTRDWHEYRC--FGPFSFFDIHEGKESQPAGSGSWIN 619
+R FPS FY AL D + RD +RC F P+ FD +G+E Q A S S N
Sbjct: 597 IRMFPSSIFYSNALIDAPGLAK--IRDLPSHRCWPFQPYMVFDAVDGQEIQ-AASFSRYN 653
Query: 620 IDEVDFVLLLFHKLISMYPQLKSSSQ-LAIISPYRHQVKQFQERF--KETFGVESQKVVD 676
E F++ L K ++P + S+Q + ++S YR Q + Q K T G +++
Sbjct: 654 QVEASFIIDLLEKYYQLFPLVDDSTQKVVVLSGYRKQCELIQNMLHQKPTLG----QLIS 709
Query: 677 ITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLRED 736
++T+D QG+E D+ I SCVR S IGF++D RR+NV +TRAKSS+ +V + +
Sbjct: 710 VSTIDAFQGQEGDLVILSCVRTS-ANDIGFVSDMRRLNVALTRAKSSLWIVCKCEAVSKF 768
Query: 737 KHWNNLVKSAEKQDC 751
W L+K+A+++ C
Sbjct: 769 NFWKALLKNAKERGC 783
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 94/424 (22%), Positives = 162/424 (38%), Gaps = 89/424 (20%)
Query: 51 LREVKDTYKDVDDYLATFEPLLFEEVKAQIIQKKDEEEVQEWKLRLVME--CGEADGFHL 108
LRE+ T+ DV++Y ATF L EEV++ + D R+ +E E+ +L
Sbjct: 24 LREIPITFHDVEEYYATFYTTLVEEVRSDLKDAYDGSIAGRRTFRISIERKWTESSCTYL 83
Query: 109 PSVTYEADEVESISPNDLLLLSKEEFKEGSTFPTTYAFALVEHCQANLLRLRMYLAGEVI 168
+ + SI ++ +S AL+ + VI
Sbjct: 84 ELKLWIEEGAPSIVEGTVIYISSARVTNTRLHS---ELALLGTVATQTFEMGKRCEVRVI 140
Query: 169 HINKDAVKSQRLLNI----HSLITSSVSAVEKRLFSLKICSLSTIAREYLALRSV----- 219
H +++LL HS K L+ + C LST R++ AL +V
Sbjct: 141 HPRDARCGAEQLLEAIRPGHS----------KYLWGVPTCRLSTHVRQFEALAAVCDTNP 190
Query: 220 -------GSLP-----FKDLILS---------ASEKSSGSQDQSWKIPGLLHEYIKENHN 258
GS F+ +L+ A + Q K G + ++ N
Sbjct: 191 VRQNTPLGSWTYDVQNFQHYLLNPKRVAELFIAPPPPTVRQLNLDKAGGFVAP-MQATLN 249
Query: 259 ASQLEAIHEGLLR---------KAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGG 309
QL+A+ + R F LIQGPPGTGKT+ IL L + ++H + +
Sbjct: 250 TPQLDALLACVQRIHNSKKSDQPPFSLIQGPPGTGKTKVILSL-ANVVHLLQFHDYFEKV 308
Query: 310 LREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNSS 369
+ +K G + A+ + D+ ++
Sbjct: 309 MSLVKAGK-----------------VAQADSLKRKRQTEQDNA---------------NT 336
Query: 370 RRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHL 429
++ R+L+CAPSN+A+D I+ R++ + Y+P I+R+ + +V++ A
Sbjct: 337 HNFKPRILICAPSNAAVDNILERIIRERFAQLDNSRYSPDILRL-VSGDANVSTTAQSVS 395
Query: 430 VEQK 433
VEQ+
Sbjct: 396 VEQR 399
>gi|301777974|ref|XP_002924403.1| PREDICTED: probable helicase senataxin-like [Ailuropoda melanoleuca]
gi|281354488|gb|EFB30072.1| hypothetical protein PANDA_013736 [Ailuropoda melanoleuca]
Length = 2691
Score = 201 bits (512), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 144/458 (31%), Positives = 219/458 (47%), Gaps = 86/458 (18%)
Query: 375 RVLVCAPSNSALDEIVLRLL---------------NTG----IRDENIRSYTPKIVRIGL 415
RVLVCAPSN+A+DE++ +++ N G +R +S ++++ L
Sbjct: 2016 RVLVCAPSNAAVDELMKKIILEFKEKCKDKKNPLGNCGDINLVRLGPEKSINNEVLKFSL 2075
Query: 416 --KAHHSVNSVAIDHLVEQKRDDSAADKQ------------------------KHGATRK 449
+ +H + H+ E R D Q K K
Sbjct: 2076 DSQVNHRMKKDLPSHVQEMHRRKEFLDHQLDELSRQRALCRGGREIQRQELDEKIAKVSK 2135
Query: 450 DRDSI--------------RSAILNEAVIVCSTLSFSGSALLSKLNHG-----FDVVIID 490
+R + +S I+ E+ ++C TLS SG LL G F VI+D
Sbjct: 2136 ERQELASKIKEVQGRPQKTQSIIILESHVICCTLSTSGGLLLESAFRGQGGVPFSCVIVD 2195
Query: 491 EAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQR------ 544
EA Q+ E TL PL C ++ LVGDP QLP TVIS A+ GY S+ R +
Sbjct: 2196 EAGQSCEVETLTPLIHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMARFYKLLEDNV 2255
Query: 545 -----AGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVE-DYTTRDWHEYRCFGPF 598
P+ L QYRMHP++ FPS Y+ +L+ E + + DW F P+
Sbjct: 2256 EHNMIGRLPILQLTVQYRMHPDICLFPSNYVYNRSLKTNRQTETNRCSSDWP----FQPY 2311
Query: 599 SFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQ 658
FD+ +G E + + S++N+ E+ V+ + KLI + + + II+ Y+ Q
Sbjct: 2312 LVFDVGDGSERR--DNDSYVNVQEIKLVMEII-KLIKDKRRDVTFRNIGIITHYKAQKMM 2368
Query: 659 FQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKK-SIGFLADYRRMNVGI 717
Q+ + F + VD TVDG QGR+KD I +CVRA+ + SIGFLA +R+NV I
Sbjct: 2369 IQKDLDKEFDRKGPAEVD--TVDGFQGRQKDCVIVTCVRANTMQGSIGFLASLQRLNVTI 2426
Query: 718 TRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRV 755
TRAK S+ ++G TL E++HWN L++ A+K+ + +
Sbjct: 2427 TRAKYSLFILGHLRTLMENQHWNQLIQDAQKRGAIIKT 2464
Score = 44.7 bits (104), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 113/297 (38%), Gaps = 79/297 (26%)
Query: 52 REVKDTYKDVDDYLATFEPLL----FEEVKAQIIQKKDEEEVQEWKLRL----------- 96
R V ++D DY F PL+ FE V + I ++E+ + LR
Sbjct: 1745 RPVPVRFQDCGDYFNVFFPLMVLNTFETVAQEWISSPNKEKFYQLHLRKFPGDYKKYWEF 1804
Query: 97 ---VMECGEADGFHLPSVTYEADEVESISPNDLLLLSKEEFKEGSTFPTTYAFALVEHCQ 153
+ EC A FH NDL+ L E + G T +
Sbjct: 1805 VVHLEECELAKQFH-------------PKENDLVFLVPER-QNGEKKDTE---------R 1841
Query: 154 ANLLRLRMYLAGEVIHINKDAV----KSQRLLNIHS--------------LITSSVSAVE 195
++ LR Y G + + +V KS+ L+I + ++ SS+ +
Sbjct: 1842 NHMQDLREYHCGYIHKFRRTSVMRNGKSECSLSIQTQDNLPVNLNELVKCIVISSLVTTQ 1901
Query: 196 KRLFSLKICSLSTIAREYLALRSVGSLPF----KDLILSASEKSSGSQDQSWKIPGLLHE 251
++L ++ + S R LA + P KDL+ + SE+ I L +
Sbjct: 1902 RKLKAMSLLS----GRNQLARAVLNPNPMDFCTKDLLTTTSER----------IIAYLRD 1947
Query: 252 YIKENHNA--SQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHS 306
+ ++ A + + LI GPPGTGK++TI+GLL +L + HS
Sbjct: 1948 FNEDQKKAIETAYAMVKHSPSVAKICLIHGPPGTGKSKTIVGLLYRLLTENQRKGHS 2004
>gi|19577367|emb|CAD28448.1| possible regulator of nonsense transcripts [Aspergillus fumigatus]
Length = 1060
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 148/450 (32%), Positives = 218/450 (48%), Gaps = 56/450 (12%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNS-VAIDHLVEQK 433
+VLVCAPSN A+D++ R+ TG+ K VR+ K+ V S V L EQ
Sbjct: 452 QVLVCAPSNVAVDQLCERIHRTGL----------KTVRVTAKSREDVESPVGFLSLHEQV 501
Query: 434 R-DDSAADKQKHGATRKD------------RDSIRSA---ILNEAVIVCSTLSFSGSALL 477
R +DS + K + + + RSA ILN A ++C T +G L
Sbjct: 502 RLNDSNIELIKLNQLKAELGELSSQDEKRLKQLTRSAEREILNNADVICCTCVGAGDPRL 561
Query: 478 SKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTS 537
+KL F V+IDE+ Q+ EP ++PL GCKQV LVGD QL +++ A G S
Sbjct: 562 AKLK--FRTVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQS 619
Query: 538 LFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRD----WHEYR 593
LF+RL G L QYRMHP + FPS FY+ +L++G D RD W
Sbjct: 620 LFERLVILGCSPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGVSAFDRLRRDVDFPWPVVD 679
Query: 594 CFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYR 653
P F+ + G E A S++N E V + + Q + + II+PY
Sbjct: 680 --SPMMFWS-NLGNEEISASGTSYLNRTEATNVEKIVTRFFKAGVQ---PADIGIITPYE 733
Query: 654 HQVKQFQERFKE--TFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYR 711
Q + TF E K +++ +VD QGREKD I SCVR++D + IGFL+D R
Sbjct: 734 GQRSYIVSSMQANGTFKKEHYKEIEVASVDAFQGREKDFIILSCVRSNDHQGIGFLSDPR 793
Query: 712 RMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDC------------LFRVSKPY 759
R+NV +TRAK ++++G L + WN L++ +++ C L + S+P
Sbjct: 794 RLNVALTRAKYGLVILGNPKVLSKHPLWNCLLQHFKERHCLVEGPLSNLQESLIQFSRPK 853
Query: 760 ASFFSDENLE---SMRKNATTDNVQGADGH 786
S+ + + + N T+ + G +GH
Sbjct: 854 QSYRGPQRFQMAYNHASNVTSGMMNGRNGH 883
>gi|119495335|ref|XP_001264454.1| regulator of nonsense transcripts, putative [Neosartorya fischeri
NRRL 181]
gi|119412616|gb|EAW22557.1| regulator of nonsense transcripts, putative [Neosartorya fischeri
NRRL 181]
Length = 1079
Score = 201 bits (511), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 148/450 (32%), Positives = 218/450 (48%), Gaps = 56/450 (12%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNS-VAIDHLVEQK 433
+VLVCAPSN A+D++ R+ TG+ K VR+ K+ V S V L EQ
Sbjct: 471 QVLVCAPSNVAVDQLCERIHRTGL----------KTVRVTAKSREDVESPVGFLSLHEQV 520
Query: 434 R-DDSAADKQKHGATRKD------------RDSIRSA---ILNEAVIVCSTLSFSGSALL 477
R +DS + K + + + RSA ILN A ++C T +G L
Sbjct: 521 RLNDSNIELIKLNQLKAELGELSSQDEKRLKQLTRSAEREILNNADVICCTCVGAGDPRL 580
Query: 478 SKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTS 537
+KL F V+IDE+ Q+ EP ++PL GCKQV LVGD QL +++ A G S
Sbjct: 581 AKLK--FRTVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQS 638
Query: 538 LFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRD----WHEYR 593
LF+RL G L QYRMHP + FPS FY+ +L++G D RD W
Sbjct: 639 LFERLVILGCSPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGVSAFDRLRRDVDFPWPVVD 698
Query: 594 CFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYR 653
P F+ + G E A S++N E V + + Q + + II+PY
Sbjct: 699 --SPMMFWS-NLGNEEISASGTSYLNRTEATNVEKIVTRFFKAGVQ---PADIGIITPYE 752
Query: 654 HQVKQFQERFKE--TFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYR 711
Q + TF E K +++ +VD QGREKD I SCVR++D + IGFL+D R
Sbjct: 753 GQRSYIVSSMQANGTFKKEHYKEIEVASVDAFQGREKDFIILSCVRSNDHQGIGFLSDPR 812
Query: 712 RMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDC------------LFRVSKPY 759
R+NV +TRAK ++++G L + WN L++ +++ C L + S+P
Sbjct: 813 RLNVALTRAKYGLVILGNPKVLSKHPLWNCLLQHFKERHCLVEGPLSNLQESLIQFSRPK 872
Query: 760 ASFFSDENLE---SMRKNATTDNVQGADGH 786
S+ + + + N T+ + G +GH
Sbjct: 873 QSYRGPQRFQMAYNHASNVTSGMMNGRNGH 902
>gi|70995842|ref|XP_752676.1| regulator of nonsense transcripts [Aspergillus fumigatus Af293]
gi|42820708|emb|CAF32021.1| regulator of nonsense transcripts, putative [Aspergillus fumigatus]
gi|66850311|gb|EAL90638.1| regulator of nonsense transcripts, putative [Aspergillus fumigatus
Af293]
gi|159131430|gb|EDP56543.1| regulator of nonsense transcripts, putative [Aspergillus fumigatus
A1163]
Length = 1079
Score = 201 bits (511), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 148/450 (32%), Positives = 218/450 (48%), Gaps = 56/450 (12%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNS-VAIDHLVEQK 433
+VLVCAPSN A+D++ R+ TG+ K VR+ K+ V S V L EQ
Sbjct: 471 QVLVCAPSNVAVDQLCERIHRTGL----------KTVRVTAKSREDVESPVGFLSLHEQV 520
Query: 434 R-DDSAADKQKHGATRKD------------RDSIRSA---ILNEAVIVCSTLSFSGSALL 477
R +DS + K + + + RSA ILN A ++C T +G L
Sbjct: 521 RLNDSNIELIKLNQLKAELGELSSQDEKRLKQLTRSAEREILNNADVICCTCVGAGDPRL 580
Query: 478 SKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTS 537
+KL F V+IDE+ Q+ EP ++PL GCKQV LVGD QL +++ A G S
Sbjct: 581 AKLK--FRTVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQS 638
Query: 538 LFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRD----WHEYR 593
LF+RL G L QYRMHP + FPS FY+ +L++G D RD W
Sbjct: 639 LFERLVILGCSPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGVSAFDRLRRDVDFPWPVVD 698
Query: 594 CFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYR 653
P F+ + G E A S++N E V + + Q + + II+PY
Sbjct: 699 --SPMMFWS-NLGNEEISASGTSYLNRTEATNVEKIVTRFFKAGVQ---PADIGIITPYE 752
Query: 654 HQVKQFQERFKE--TFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYR 711
Q + TF E K +++ +VD QGREKD I SCVR++D + IGFL+D R
Sbjct: 753 GQRSYIVSSMQANGTFKKEHYKEIEVASVDAFQGREKDFIILSCVRSNDHQGIGFLSDPR 812
Query: 712 RMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDC------------LFRVSKPY 759
R+NV +TRAK ++++G L + WN L++ +++ C L + S+P
Sbjct: 813 RLNVALTRAKYGLVILGNPKVLSKHPLWNCLLQHFKERHCLVEGPLSNLQESLIQFSRPK 872
Query: 760 ASFFSDENLE---SMRKNATTDNVQGADGH 786
S+ + + + N T+ + G +GH
Sbjct: 873 QSYRGPQRFQMAYNHASNVTSGMMNGRNGH 902
>gi|440794946|gb|ELR16091.1| hypothetical protein ACA1_224920 [Acanthamoeba castellanii str.
Neff]
Length = 1615
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 132/396 (33%), Positives = 207/396 (52%), Gaps = 37/396 (9%)
Query: 376 VLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLK--------AHHSVNSVAID 427
+L A +N A+D ++ L ++G+R +R P +R L+ H+ N+ +D
Sbjct: 376 ILCTADTNVAVDNLLEGLADSGVR--AVRVGRPVKIREELRDLSLEALMQEHAANN-KLD 432
Query: 428 HLVEQ-------KRDDSAADKQKHGAT-----RKDRDSIRSAILNEAVIVCSTLSFSGSA 475
L ++ K + A ++ G T R+ D I + +L +A ++C+T +G
Sbjct: 433 ALRQELAGLSHGKTPEERAAAKREGVTLHQNIRRLEDYIHNDVLGKADVICATCIGAGHD 492
Query: 476 LLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYG 535
LL+ + F +VI+DE+ QA EPA+L L + V L+GD QLP TV SP A+ G
Sbjct: 493 LLA--SRAFPIVILDESTQATEPASLCALVHNSQHVVLLGDHYQLPPTVTSPEAQQGGLS 550
Query: 536 TSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCF 595
SLF R+ G ML+ QYRMHP + FPS FY ++DG + +
Sbjct: 551 ESLFARMIAMGIEPYMLEIQYRMHPIISEFPSVHFYGGKIKDGIVAAQRPSPTGIAWPSE 610
Query: 596 G-PFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQ---LKSSSQLAIISP 651
G P +F ++ +G E Q SW N E + V +L+S + Q + + +I+P
Sbjct: 611 GNPIAFVNV-DGYEKQSTDGYSWFNSAEGEAVF----QLVSAFDQRSDVGDVKDIGVITP 665
Query: 652 YRHQVKQFQERFKETFGV---ESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLA 708
Y QVK + F G+ E ++I +VDG QGREK+V IF+ VR++ + +GFL
Sbjct: 666 YNGQVKHLADLFSRRGGMNKNEKWHKLNINSVDGYQGREKEVIIFTAVRSNSRGDVGFLR 725
Query: 709 DYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVK 744
D+RR+NV +TRA+ +LVVG TL+ D+HW ++
Sbjct: 726 DWRRLNVALTRARRGLLVVGNRRTLQSDEHWGKWLR 761
>gi|145499757|ref|XP_001435863.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124402999|emb|CAK68466.1| unnamed protein product [Paramecium tetraurelia]
Length = 928
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 143/459 (31%), Positives = 234/459 (50%), Gaps = 44/459 (9%)
Query: 370 RRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIG---LKAHHSVNSVAI 426
++ R ++LVCAPSN +D++ ++ TG++ + S T + V L H+ V S+ I
Sbjct: 413 QKQRGQILVCAPSNIVVDQLAEKINKTGVKVVRLCSKTRESVSTTIEFLTLHNQVRSLDI 472
Query: 427 DH---------LVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALL 477
L++Q+ + D+Q + RD I+ +A ++C+T S L
Sbjct: 473 PQYHQLQMFYELMDQQGELDQKDEQ---VFIRMRDEAEKEIIEQADVICTTCIGSADKRL 529
Query: 478 SKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTS 537
+ F V+IDEA QA+EP L+P+ G + V LVGD QL V S A +G S
Sbjct: 530 KDMR--FPFVLIDEATQAIEPECLLPMIKGAQHVILVGDHRQLGPVVQSREAASVGLDRS 587
Query: 538 LFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYT---TRDWHEYRC 594
LF+RL + G L+ QYRMHPE+ FPS FY+ L++G + D T W +
Sbjct: 588 LFERLVQLGIRPVRLQVQYRMHPELTVFPSNTFYEGTLQNGVTISDRTHSGNFPWPNKQ- 646
Query: 595 FGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRH 654
P F ++ +G+E A S++N E + + + +Y +++ II+PY+
Sbjct: 647 -KPMIFINV-QGQEQLSASGTSYLNTQE---AVAVEQAVYYLYQNTVKLNKIGIITPYKG 701
Query: 655 Q---VKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYR 711
Q + + +R + + +++ +VDG QGREKD I SCVR++D + IGFL + R
Sbjct: 702 QRTYIISYLQRNGQ-LPYNQYRDIEVASVDGFQGREKDFIIISCVRSNDTQGIGFLTNPR 760
Query: 712 RMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRVSKP-----YASFFSDE 766
R+NV ITRA+ ++++G A L +D WNN++ + D L S P F +
Sbjct: 761 RLNVTITRARFGLIIIGNARVLCKDNLWNNMLNHFKDLDLLMEGSLPNLKPSSMKFRPPQ 820
Query: 767 NLESMRKNATTDNVQGADGHVPHDDETMH-YANTGDADQ 804
R+N T + GA+ D+++++ YA T + +Q
Sbjct: 821 KFIPERRNNTMN---GAN-----DEKSVYSYAQTDNLNQ 851
>gi|291411430|ref|XP_002721992.1| PREDICTED: Upf1-like [Oryctolagus cuniculus]
Length = 2613
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 148/458 (32%), Positives = 220/458 (48%), Gaps = 86/458 (18%)
Query: 375 RVLVCAPSNSALDEIVLRLL---------------NTG----IRDENIRSYTPKIVRIGL 415
RVLVCAPSN+A+DE++ +++ N G +R +S +++R L
Sbjct: 1956 RVLVCAPSNAAVDELMKKIILEFKEKCKDKKNPLGNCGDINLVRLGPEKSINNEVLRFSL 2015
Query: 416 --KAHHSVNSVAIDHLVEQKRDDSAADKQKHGATRK---------------DRDSI---- 454
+ +H + H+ E R D+Q +R+ DR+ +
Sbjct: 2016 DSQVNHRMKKDLPSHVQEMHRRKEILDRQLDELSRQRALCRGGREMQRQELDREIVSISK 2075
Query: 455 -------------------RSAILNEAVIVCSTLSFSGSALLSKLNHG-----FDVVIID 490
++ I+ E+ ++C TLS SG LL G F VI+D
Sbjct: 2076 ERQELASKIKEVQGRPQKTQNIIILESHVICCTLSTSGGLLLESAFRGQGGVPFSCVIVD 2135
Query: 491 EAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRL-------- 542
EA Q+ E TL PL C ++ LVGDP QLP TVIS A+ GY S+ R
Sbjct: 2136 EAGQSCEVETLTPLIHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMARFCKLLEEAV 2195
Query: 543 --QRAG-YPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVE-DYTTRDWHEYRCFGPF 598
R G PV L QYRMHP++ FPS Y+ +L E + + DW F P+
Sbjct: 2196 ERSRVGRLPVLQLTVQYRMHPDICLFPSNYVYNRSLRTNRLTETNRCSSDWP----FQPY 2251
Query: 599 SFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQ 658
FD+ +G E + + S++NI E+ V+ + KLI + + + II+ Y+ Q
Sbjct: 2252 LVFDVGDGSERR--DNDSYVNIQEIKLVMEII-KLIKDKRRDITFRNVGIITHYKAQKTM 2308
Query: 659 FQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASD-KKSIGFLADYRRMNVGI 717
Q+ + F VD TVD QGR+KD I +CVRA+ + SIGFLA +RMNV I
Sbjct: 2309 IQKDLDKEFDRRGPAEVD--TVDAFQGRQKDCVIVTCVRANALQGSIGFLASLQRMNVTI 2366
Query: 718 TRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRV 755
TRAK S+ ++G TL E++HWN L++ A+K+ + +
Sbjct: 2367 TRAKYSLFILGHLRTLMENQHWNQLIQDAQKRGAIVKT 2404
>gi|440789574|gb|ELR10880.1| putative DNA helicase [Acanthamoeba castellanii str. Neff]
Length = 1656
Score = 200 bits (509), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 132/396 (33%), Positives = 207/396 (52%), Gaps = 37/396 (9%)
Query: 376 VLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLK--------AHHSVNSVAID 427
+L A +N A+D ++ L ++G+R +R P +R L+ H+ N+ +D
Sbjct: 377 ILCTADTNVAVDNLLEGLADSGVR--AVRVGRPVKIREELRDLSLEALMQEHAANN-KLD 433
Query: 428 HLVEQ-------KRDDSAADKQKHGAT-----RKDRDSIRSAILNEAVIVCSTLSFSGSA 475
L ++ K + A ++ G T R+ D I + +L +A ++C+T +G
Sbjct: 434 ALRQELAGLSHGKTPEERAAAKREGVTLHQNIRRLEDYIHNDVLGKADVICATCIGAGHD 493
Query: 476 LLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYG 535
LL+ + F +VI+DE+ QA EPA+L L + V L+GD QLP TV SP A+ G
Sbjct: 494 LLA--SRAFPIVILDESTQATEPASLCALVHNSQHVVLLGDHYQLPPTVTSPEAQQGGLS 551
Query: 536 TSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCF 595
SLF R+ G ML+ QYRMHP + FPS FY ++DG + +
Sbjct: 552 ESLFARMIAMGIEPYMLEIQYRMHPIISEFPSVHFYGGKIKDGIVAAQRPSPTGIAWPSE 611
Query: 596 G-PFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQ---LKSSSQLAIISP 651
G P +F ++ +G E Q SW N E + V +L+S + Q + + +I+P
Sbjct: 612 GNPIAFVNV-DGYEKQSTDGYSWFNSAEGEAVF----QLVSAFDQRSDVGDVKDIGVITP 666
Query: 652 YRHQVKQFQERFKETFGV---ESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLA 708
Y QVK + F G+ E ++I +VDG QGREK+V IF+ VR++ + +GFL
Sbjct: 667 YNGQVKHLADLFSRRGGMNKNEKWHKLNINSVDGYQGREKEVIIFTAVRSNSRGDVGFLR 726
Query: 709 DYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVK 744
D+RR+NV +TRA+ +LVVG TL+ D+HW ++
Sbjct: 727 DWRRLNVALTRARRGLLVVGNRRTLQSDEHWGKWLR 762
>gi|322706853|gb|EFY98432.1| Regulator of nonsense transcripts 1 [Metarhizium anisopliae ARSEF
23]
Length = 1083
Score = 200 bits (508), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 151/479 (31%), Positives = 225/479 (46%), Gaps = 60/479 (12%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSV-NSVAIDHLVEQ- 432
+VLVCAPSN A+D++ R+ NT + K+VR+ K+ V +SV+ L EQ
Sbjct: 494 QVLVCAPSNVAVDQLCERIHNTNL----------KVVRLTAKSREDVESSVSFLALHEQV 543
Query: 433 ---------------KRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALL 477
K D Q ++ + ILN A +VC T +G L
Sbjct: 544 RLSEHNSELVKLSQLKNDVGELSSQDEKKFKQLTKAAEREILNNADVVCCTCVGAGDPRL 603
Query: 478 SKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTS 537
SK+ F V+IDE+ Q+ EP ++PL GCKQV LVGD QL +++ A G S
Sbjct: 604 SKMK--FRNVLIDESTQSAEPECMIPLVLGCKQVVLVGDHKQLGPVIMNKKAAKAGLNQS 661
Query: 538 LFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRD----WHEYR 593
LF+RL + L TQYRMHP + FPS FYD +L++G E RD W
Sbjct: 662 LFERLIKLQLAPIRLTTQYRMHPCLSEFPSNMFYDGSLQNGITHEQRLRRDVEFPWPIAE 721
Query: 594 CFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLK-SSSQLAIISPY 652
P F+ +E +G+ S++N E V K ++ + + S++ +I+PY
Sbjct: 722 T--PMMFWSNLGNEEISTSGT-SYLNRTEASNV----EKTVTRFFKAGVKPSEIGVITPY 774
Query: 653 RHQVKQFQERFKE--TFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADY 710
Q + +F E K V++ +VD QGREKD + SCVR+++ + IGFL+D
Sbjct: 775 EGQRSYIVTTMQNSGSFKKEYYKEVEVASVDAFQGREKDFIVLSCVRSNENQGIGFLSDP 834
Query: 711 RRMNVGITRAKSSILVVGCASTLREDKHWNNLV------------KSAEKQDCLFRVSKP 758
RR+NV +TRAK ++++G L + + W+NL+ Q CL + S+P
Sbjct: 835 RRLNVALTRAKYGLVILGNPKVLSKHELWHNLLVHFKDRKCFVEGPLTNLQACLLQFSRP 894
Query: 759 YASFFSDENLESMRKNATTDNVQGADGHVPHDDETMHYANTGDADQGQADDIDNADGDA 817
SF N +S A N + P D ++G DD+ + G A
Sbjct: 895 KVSFRQKNNYQSQYGTAGYTNGRFNGSATPGRD-----FDSGSMMSYIPDDVSSIQGSA 948
Score = 42.7 bits (99), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 30/48 (62%), Gaps = 7/48 (14%)
Query: 241 QSWKIPGLLHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQT 288
+ W +PGL N SQ++AI + +L+K LIQGPPGTGKT T
Sbjct: 439 RKWSVPGL------PELNQSQIDAI-KSVLQKPLSLIQGPPGTGKTVT 479
>gi|335281152|ref|XP_003353743.1| PREDICTED: probable helicase senataxin [Sus scrofa]
Length = 2661
Score = 200 bits (508), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 147/458 (32%), Positives = 217/458 (47%), Gaps = 86/458 (18%)
Query: 375 RVLVCAPSNSALDEIVLRLL---------------NTG----IRDENIRSYTPKIVRIGL 415
RVLVCAPSN+A+DE++ +++ N G +R +S +++R L
Sbjct: 1996 RVLVCAPSNAAVDELMKKIILEFKEKCKDKRNPLGNCGDINLVRLGPEKSINNEVLRFSL 2055
Query: 416 --KAHHSVNSVAIDHLVEQKRDDSAADKQ------------------------KHGATRK 449
+ +H + ++ E R D Q K K
Sbjct: 2056 DSQVNHRMKKDLPSYVQEMHRRKEFLDHQLDELSRQRALCRGGREMQRRELDGKIAEVSK 2115
Query: 450 DRDSIRS--------------AILNEAVIVCSTLSFSGSALLSKLNHG-----FDVVIID 490
+R + S I+ E+ I+C TLS SG LL G F VI+D
Sbjct: 2116 ERQELASKIKEVQGRPQKTQNTIILESHIICCTLSTSGGLLLESAFRGQGGVPFSCVIVD 2175
Query: 491 EAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQR------ 544
EA Q+ E TL PL C ++ LVGDP QLP TVIS A+ GY S+ R +
Sbjct: 2176 EAGQSCEVETLTPLIHRCNKLVLVGDPKQLPPTVISMKAQDYGYDQSMMARFYKLLEENV 2235
Query: 545 -----AGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVE-DYTTRDWHEYRCFGPF 598
P+ L QYRMHP++ FPS Y+ L+ S E + DW F P+
Sbjct: 2236 EHNVIGRLPILQLTVQYRMHPDICLFPSNYIYNRNLKTNSLTEASRCSSDWP----FQPY 2291
Query: 599 SFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQ 658
FD+ +G E + + S++N+ E+ V+ + KLI + + + II+ Y+ Q
Sbjct: 2292 LVFDVGDGSERR--DNDSYVNVQEIKLVMEII-KLIKDKRRDVTFRNIGIITHYKAQKTL 2348
Query: 659 FQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRA-SDKKSIGFLADYRRMNVGI 717
Q+ + F + VD TVDG QGR+KD I +CVRA + + SIGFLA +R+NV I
Sbjct: 2349 IQKDLDKEFDRKGPAEVD--TVDGFQGRQKDCVIVTCVRAKTSQGSIGFLASLQRLNVTI 2406
Query: 718 TRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRV 755
TRAK S+ ++G TLRE+ HWN L++ A+K+ + +
Sbjct: 2407 TRAKYSLFILGHLRTLRENDHWNQLIEDAQKRGAIIKT 2444
Score = 47.4 bits (111), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 125/316 (39%), Gaps = 53/316 (16%)
Query: 17 FCKIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLL---- 72
F K +L W Y V D+ + R V ++D DY + F PL+
Sbjct: 1696 FVKEVLKWKYEMFVN-----FDQCGPPSGLCQAIARRVPVRFQDCGDYFSVFFPLMILNT 1750
Query: 73 FEEVKAQIIQKKDEEEVQEWKLRLVMECGEAD-GFHLPSVTY--EADEVESISP--NDLL 127
FE V + I ++E+ + LR AD + V Y E + + + P NDL+
Sbjct: 1751 FETVAQEWISSPNKEKFHQLHLRKF----PADYKKYWEFVVYLEECELAKQLHPKENDLV 1806
Query: 128 LLSKEEFKEGSTFPTTYAFALVE-HCQANLLRLRMYLAGEVIHINKD----AVKSQRLLN 182
L E A + E HC + + V+ K ++++Q L
Sbjct: 1807 FLVPERLNGEKDVERNRAHSPREYHCGY----VHKFRRTSVMRSGKSECSLSIQTQDKLP 1862
Query: 183 IH------SLITSSVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPF----KDLILSAS 232
++ ++ SS+ +++L ++ + S R LA + P KDL+ + S
Sbjct: 1863 VNLNEFVKCVVISSLVTTQRKLKAMSLLS----GRNQLARAILNPNPMDFCTKDLLTTTS 1918
Query: 233 EKSSGSQDQSWKIPGLLHEYIKENHNA--SQLEAIHEGLLRKAFVLIQGPPGTGKTQTIL 290
E+ I L ++ ++ A + + LI GPPGTGK++TI+
Sbjct: 1919 ER----------IIAYLRDFNEDQKKAIETAYAMVKHSPSVAKICLIHGPPGTGKSKTIV 1968
Query: 291 GLLSAILHATPARVHS 306
GLL +L R HS
Sbjct: 1969 GLLYRLLTENQRRGHS 1984
>gi|414886784|tpg|DAA62798.1| TPA: hypothetical protein ZEAMMB73_068361 [Zea mays]
Length = 1205
Score = 199 bits (507), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 151/490 (30%), Positives = 243/490 (49%), Gaps = 68/490 (13%)
Query: 365 VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSV 424
V + +++ + +VLVCAPSN A+D++ ++ +TG+ K+VR+ K+ +V+S
Sbjct: 542 VYHMAKQGQGQVLVCAPSNVAVDQLAEKISSTGL----------KVVRLCAKSREAVSS- 590
Query: 425 AIDHL-------------------VEQKRDD----SAADKQKHGATRKDRDSIRSAILNE 461
++HL ++Q +D+ S++D++K+ A ++ + IL
Sbjct: 591 PVEHLTLHYQVRHLDTSEKSEFHKLQQLKDEQGELSSSDEKKYKALKR---ATEREILQS 647
Query: 462 AVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLP 521
A ++C T +G LS N F V+IDE+ QA EP L+PL G KQV LVGD QL
Sbjct: 648 ADVICCTCVGAGDPRLS--NFRFRQVLIDESTQATEPECLIPLVLGVKQVVLVGDHCQLG 705
Query: 522 ATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDV 581
++ A G SLF+RL G L+ QYRMHP + FPS FY+ L++G V
Sbjct: 706 PVIMCKKAARAGLAQSLFERLVILGVKPFRLQVQYRMHPCLSEFPSNCFYEGTLQNGVTV 765
Query: 582 -EDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQL 640
E +++ + FF + G+E A S++N E V K+++ + L
Sbjct: 766 NERHSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANV----EKIVTTF--L 819
Query: 641 KSS---SQLAIISPYRHQVKQFQERFKETFGVESQ--KVVDITTVDGCQGREKDVAIFSC 695
+S SQ+ +I+PY Q + Q K +++ +VD QGREKD I SC
Sbjct: 820 RSGVVPSQIGVITPYEGQRAYIVNYMSRNGSLRQQLYKEIEVASVDSFQGREKDYIILSC 879
Query: 696 VRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRV 755
VR+++ + IGFL D RR+NV +TRA+ I+++G L + WN+L+ ++ +CL V
Sbjct: 880 VRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNSLLTHYKEHECL--V 937
Query: 756 SKPYASFFSDENLESMRKNATTDN-----VQGADGHVPHDDETMHYANTGDADQGQADDI 810
P + +++ +K N + GA G MH AN G QA D
Sbjct: 938 EGPLNNL--KQSMVQFQKPKKIYNDRRLLLGGAQG--------MHGANFGAGASSQAADK 987
Query: 811 DNADGDAEMY 820
+ G + +
Sbjct: 988 RSGRGKGQSF 997
>gi|348523131|ref|XP_003449077.1| PREDICTED: regulator of nonsense transcripts 1-like [Oreochromis
niloticus]
Length = 1101
Score = 199 bits (507), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 138/424 (32%), Positives = 222/424 (52%), Gaps = 45/424 (10%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + SR+ VLVCAPSN A+D++ ++ TG+ K+VR
Sbjct: 476 PGTGKTVTSATIVYHLSRQGNGPVLVCAPSNIAVDQLTEKIDKTGL----------KVVR 525
Query: 413 IGLKAHHSVNSVA-----------IDHL-----VEQKRDD----SAADKQKHGATRKDRD 452
+ K+ ++ S +D + ++Q +D+ S+AD++++ A + R
Sbjct: 526 LCAKSREAIESPVSFLALHNQISNMDSMPELQKLQQLKDETGELSSADEKRYRALK--RT 583
Query: 453 SIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVF 512
+ R ++N VI C+ + +G L+K+ F ++IDE+ QA EP +VP+ G KQ+
Sbjct: 584 AERELLMNADVICCTCVG-AGDPRLAKMQ--FRSILIDESTQATEPECMVPVVLGAKQLI 640
Query: 513 LVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYD 572
LVGD QL V+ A G SLF+RL G L+ QYRMHP + +FPS FY+
Sbjct: 641 LVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYE 700
Query: 573 EALEDGSDVEDYTTR--DWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
+L++G D + D+ + P FF + +G+E + S++N E V +
Sbjct: 701 GSLQNGVTAADRIKKGFDFQWPQPDKPM-FFYVTQGQEEIASSGTSYLNRTEAANVEKIT 759
Query: 631 HKLISMYPQLKSSSQLAIISPYRHQVKQFQE--RFKETFGVESQKVVDITTVDGCQGREK 688
+L+ + Q+ II+PY Q + +F + + + V+I +VD QGREK
Sbjct: 760 TRLLKAGAK---PDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQQVEIASVDAFQGREK 816
Query: 689 DVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEK 748
D I SCVRA++ + IGFL D RR+NV +TRAK +++VG L + WNNL+ + ++
Sbjct: 817 DFIILSCVRANEHQGIGFLNDPRRLNVALTRAKYGVIIVGNPKALSKQPLWNNLLNNYKE 876
Query: 749 QDCL 752
Q L
Sbjct: 877 QKVL 880
>gi|169615114|ref|XP_001800973.1| hypothetical protein SNOG_10712 [Phaeosphaeria nodorum SN15]
gi|160702890|gb|EAT82106.2| hypothetical protein SNOG_10712 [Phaeosphaeria nodorum SN15]
Length = 1078
Score = 199 bits (507), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 149/474 (31%), Positives = 234/474 (49%), Gaps = 45/474 (9%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR--IG-LKAHHSV----NSVAID 427
+VLVCAPSN A+D++ R+ TG++ + + + + V +G L H V +V ++
Sbjct: 486 QVLVCAPSNVAVDQLCERIHLTGLKTVRVTAKSREDVESPVGFLSLHEQVRMNDTNVELN 545
Query: 428 HLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVV 487
L + K D Q ++ + ILN A ++C T +G LSK+ F V
Sbjct: 546 KLNQLKSDVGELSSQDEKKFKQLTRAAEREILNAADVICCTCVGAGDPRLSKMK--FRTV 603
Query: 488 IIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGY 547
+IDE+ Q+ EP ++PL GCKQV LVGD QL +++ A G SLF+RL G
Sbjct: 604 LIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAATAGLNQSLFERLVILGC 663
Query: 548 PVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRD----WHEYRCFGPFSFFDI 603
L+ QYRMHP + FPS FY+ +L++G +++ RD W P F+
Sbjct: 664 SPIRLQVQYRMHPCLSEFPSNMFYEGSLQNGVTMQERIRRDVDFPWPVAD--SPMMFWS- 720
Query: 604 HEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQ---LAIISPYRHQVKQFQ 660
+ G E A S++N E V K+++ + K+ Q + II+PY Q
Sbjct: 721 NLGAEEISASGTSYLNRTEAQNV----EKIVTRF--FKAGVQPGDIGIITPYEGQRSYVV 774
Query: 661 ERFKET--FGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGIT 718
+ T F E+ K V++ +VD QGREKD I SCVR++D + IGFL+D RR+NV +T
Sbjct: 775 SSMQATGSFKKENYKDVEVASVDAFQGREKDFIILSCVRSNDHQGIGFLSDPRRLNVALT 834
Query: 719 RAKSSILVVGCASTLREDKHWNNLVKSAEKQDC------------LFRVSKPYASFFSDE 766
RAK ++++G L + W+ L+ ++++C L + S+P ++ +
Sbjct: 835 RAKYGLVILGNPKVLSKHPLWHYLLLHFKERNCLVEGPLTNLQVSLLQFSRPKQTYRGPQ 894
Query: 767 --NLESMRKNATTDNVQGA-DGHVPHDDETMHYANTGDADQGQADDIDNADGDA 817
+ NA T QG+ G+ P E Y + G DD+ + A
Sbjct: 895 RYQMAYQHANAMTSGRQGSWSGNKPTRQE---YNDNGSIVGYIPDDVSSVHSSA 945
>gi|432854578|ref|XP_004067970.1| PREDICTED: LOW QUALITY PROTEIN: regulator of nonsense transcripts
1-like [Oryzias latipes]
Length = 1093
Score = 199 bits (506), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 138/424 (32%), Positives = 222/424 (52%), Gaps = 45/424 (10%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + SR+ VLVCAPSN A+D++ ++ TG+ K+VR
Sbjct: 467 PGTGKTVTSATIVYHLSRQGNGPVLVCAPSNIAVDQLTEKIDKTGL----------KVVR 516
Query: 413 IGLKAHHSVNSVA-----------IDHL-----VEQKRDD----SAADKQKHGATRKDRD 452
+ K+ ++ S +D + ++Q +D+ S+AD++++ A + R
Sbjct: 517 LCAKSREAIESPVSFLALHNQISNMDSMPELQKLQQLKDETGELSSADEKRYRALK--RT 574
Query: 453 SIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVF 512
+ R ++N VI C+ + +G L+K+ F ++IDE+ QA EP +VP+ G KQ+
Sbjct: 575 AERELLMNADVICCTCVG-AGDPRLAKMQ--FRSILIDESTQATEPECMVPVVLGAKQLI 631
Query: 513 LVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYD 572
LVGD QL V+ A G SLF+RL G L+ QYRMHP + +FPS FY+
Sbjct: 632 LVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYE 691
Query: 573 EALEDGSDVEDYTTR--DWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
+L++G D + D+ + P FF + +G+E + S++N E V +
Sbjct: 692 GSLQNGVTAADRIKKGFDFQWPQPDKPM-FFYVTQGQEEIASSGTSYLNRTEAANVEKIT 750
Query: 631 HKLISMYPQLKSSSQLAIISPYRHQVKQFQE--RFKETFGVESQKVVDITTVDGCQGREK 688
+L+ + Q+ II+PY Q + +F + + + V+I +VD QGREK
Sbjct: 751 TRLLKAGAK---PDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQQVEIASVDAFQGREK 807
Query: 689 DVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEK 748
D I SCVRA++ + IGFL D RR+NV +TRAK +++VG L + WNNL+ + ++
Sbjct: 808 DFIILSCVRANEHQGIGFLNDPRRLNVALTRAKYGVIIVGNPKALSKQPLWNNLLNNYKE 867
Query: 749 QDCL 752
Q L
Sbjct: 868 QKVL 871
>gi|396485880|ref|XP_003842280.1| similar to regulator of nonsense transcripts 1 [Leptosphaeria
maculans JN3]
gi|312218856|emb|CBX98801.1| similar to regulator of nonsense transcripts 1 [Leptosphaeria
maculans JN3]
Length = 1080
Score = 199 bits (506), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 133/391 (34%), Positives = 204/391 (52%), Gaps = 21/391 (5%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR--IG-LKAHHSV----NSVAID 427
+VLVCAPSN A+D++ R+ TG++ + + + + V +G L H V +V ++
Sbjct: 485 QVLVCAPSNVAVDQLCERIHLTGLKTVRVTAKSREDVESPVGFLSLHEQVRMNDTNVELN 544
Query: 428 HLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVV 487
L + K D Q ++ + ILN A ++C T +G LSK+ F V
Sbjct: 545 KLNQLKSDVGELSSQDEKKFKQLTRAAEREILNAADVICCTCVGAGDPRLSKMK--FRTV 602
Query: 488 IIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGY 547
+IDE+ Q+ EP ++PL GCKQV LVGD QL +++ A G SLF+RL G
Sbjct: 603 LIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAATAGLNQSLFERLVILGC 662
Query: 548 PVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRD----WHEYRCFGPFSFFDI 603
L+ QYRMHP + FPS FY+ +L++G +++ RD W P F+
Sbjct: 663 SPIRLQVQYRMHPCLSEFPSNMFYEGSLQNGVTMQERIRRDVDFPWPVVD--SPMMFWS- 719
Query: 604 HEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERF 663
+ G E A S++N E V + + Q S + II+PY Q
Sbjct: 720 NLGVEEISASGTSYLNRTEAQNVEKIVTRFFKAGVQ---PSDIGIITPYEGQRSYVVSSM 776
Query: 664 KET--FGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAK 721
+ T F E+ K V++ +VD QGREKD I SCVR++D + IGFL+D RR+NV +TRAK
Sbjct: 777 QATGSFKKENYKEVEVASVDAFQGREKDFIILSCVRSNDHQGIGFLSDPRRLNVALTRAK 836
Query: 722 SSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
++++G L + W+ L+ ++++CL
Sbjct: 837 YGLVILGNPKVLSKHPLWHYLLLHFKERNCL 867
Score = 39.7 bits (91), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 29/46 (63%), Gaps = 7/46 (15%)
Query: 243 WKIPGLLHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQT 288
+ +PGL NASQ+ A+ + +L+K LIQGPPGTGKT T
Sbjct: 432 FSVPGL------PELNASQINAV-KSVLQKPLSLIQGPPGTGKTVT 470
>gi|414886785|tpg|DAA62799.1| TPA: hypothetical protein ZEAMMB73_068361 [Zea mays]
Length = 1251
Score = 199 bits (506), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 151/490 (30%), Positives = 243/490 (49%), Gaps = 68/490 (13%)
Query: 365 VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSV 424
V + +++ + +VLVCAPSN A+D++ ++ +TG+ K+VR+ K+ +V+S
Sbjct: 542 VYHMAKQGQGQVLVCAPSNVAVDQLAEKISSTGL----------KVVRLCAKSREAVSS- 590
Query: 425 AIDHL-------------------VEQKRDD----SAADKQKHGATRKDRDSIRSAILNE 461
++HL ++Q +D+ S++D++K+ A ++ + IL
Sbjct: 591 PVEHLTLHYQVRHLDTSEKSEFHKLQQLKDEQGELSSSDEKKYKALKR---ATEREILQS 647
Query: 462 AVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLP 521
A ++C T +G LS N F V+IDE+ QA EP L+PL G KQV LVGD QL
Sbjct: 648 ADVICCTCVGAGDPRLS--NFRFRQVLIDESTQATEPECLIPLVLGVKQVVLVGDHCQLG 705
Query: 522 ATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDV 581
++ A G SLF+RL G L+ QYRMHP + FPS FY+ L++G V
Sbjct: 706 PVIMCKKAARAGLAQSLFERLVILGVKPFRLQVQYRMHPCLSEFPSNCFYEGTLQNGVTV 765
Query: 582 -EDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQL 640
E +++ + FF + G+E A S++N E V K+++ + L
Sbjct: 766 NERHSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANV----EKIVTTF--L 819
Query: 641 KSS---SQLAIISPYRHQVKQFQERFKETFGVESQ--KVVDITTVDGCQGREKDVAIFSC 695
+S SQ+ +I+PY Q + Q K +++ +VD QGREKD I SC
Sbjct: 820 RSGVVPSQIGVITPYEGQRAYIVNYMSRNGSLRQQLYKEIEVASVDSFQGREKDYIILSC 879
Query: 696 VRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRV 755
VR+++ + IGFL D RR+NV +TRA+ I+++G L + WN+L+ ++ +CL V
Sbjct: 880 VRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNSLLTHYKEHECL--V 937
Query: 756 SKPYASFFSDENLESMRKNATTDN-----VQGADGHVPHDDETMHYANTGDADQGQADDI 810
P + +++ +K N + GA G MH AN G QA D
Sbjct: 938 EGPLNNL--KQSMVQFQKPKKIYNDRRLLLGGAQG--------MHGANFGAGASSQAADK 987
Query: 811 DNADGDAEMY 820
+ G + +
Sbjct: 988 RSGRGKGQSF 997
>gi|302419491|ref|XP_003007576.1| helicase sen1 [Verticillium albo-atrum VaMs.102]
gi|261353227|gb|EEY15655.1| helicase sen1 [Verticillium albo-atrum VaMs.102]
Length = 1948
Score = 199 bits (506), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 189/648 (29%), Positives = 287/648 (44%), Gaps = 88/648 (13%)
Query: 21 ILGWDYFRLVKESQERNDKNS-KKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKAQ 79
IL WD F E ND + +K R V DTY + Y TF LL E
Sbjct: 1137 ILEWDIFF------EGNDPPTLEKCAR-------VADTYPHPEAYKQTFWKLLVSEAWRS 1183
Query: 80 IIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADEVES----ISPNDLLLLSKEEFK 135
+ KDE + + +++ D F VT ++E+ +S D++LLS+
Sbjct: 1184 FVTSKDEATSKPFGIKIASRMS-IDRFL--EVTASMPKLENKERGLSEGDIILLSQ---- 1236
Query: 136 EGSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSAVE 195
S+ P + H A + + KD ++ LN+ + +
Sbjct: 1237 --SSNPLSDPNE--PHALARIWK---------TAYKKDMLEVTYRLNMRNNPLQGNLHIS 1283
Query: 196 KRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIKE 255
L++ KI +++TI REY AL S+ D +L A E S + + +L Y
Sbjct: 1284 AELYAAKITNMTTIEREYAALESLKYYDLMDEVLKA-EPSPVLKYSDELVTQVLTNY--- 1339
Query: 256 NHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLREIKR 315
N Q +AI F LIQGPPGTGKT+TI+ ++ A++ + GG+R
Sbjct: 1340 TLNPGQAKAILGARDNDGFTLIQGPPGTGKTKTIVAMVGALMTGN---IPQSGGVRLATG 1396
Query: 316 GPELPMHEKYNHWGRASPWLVGA--NPRDNIMPIDGDDGFFPTTGNELKPEVVNSSRRYR 373
G G+ LV A N + + + G +GN+ K +N R R
Sbjct: 1397 G-------ATQAAGQKKKILVCAPSNAAVDELVLRLKQGIRTMSGNDHK---INVLRLGR 1446
Query: 374 VRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSV--------A 425
+ A + LDE+V + L E +++ K+ VN +
Sbjct: 1447 SDAINAAVRDVTLDELVKKRLEGDNTAEKLKTARDKLHSDAAGIRDKVNELRPALEAARG 1506
Query: 426 IDHLVE---QKRDDSAADKQKHGATRKD----------------RDSIRSAILNEAVIVC 466
D +E Q++ D+ +Q T+ D R ++ IL+ A ++C
Sbjct: 1507 TDRELEMTLQRQFDTLKREQFRIGTQIDADKESGQTISREVEIKRKQVQQEILDSAQVLC 1566
Query: 467 STLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVIS 526
+TLS SG + L+ F+ VIID AAQ VE + L+PL GC + LVGDP QLP TV+S
Sbjct: 1567 ATLSGSGHEMFKNLSVDFETVIIDGAAQCVELSALIPLKYGCTKCILVGDPKQLPPTVLS 1626
Query: 527 PVAEHLGYGTSLFKRLQRAGYP--VKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDY 584
A GY SLF R+QR +P + ML TQYRMHPE+ FPS+EFY+ L DG ++
Sbjct: 1627 QSAARFGYDQSLFVRMQR-NHPEYIHMLDTQYRMHPEISYFPSQEFYEAKLVDGPNMAGL 1685
Query: 585 TTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHK 632
+ WH GP+ FFD+ +E G S +N+ E+ + ++ +
Sbjct: 1686 RRQAWHASPLLGPYRFFDVQGTQERGRKGQ-SLVNLAELKVAMQIYSR 1732
>gi|410979396|ref|XP_003996071.1| PREDICTED: probable helicase senataxin [Felis catus]
Length = 2669
Score = 199 bits (506), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 146/458 (31%), Positives = 219/458 (47%), Gaps = 86/458 (18%)
Query: 375 RVLVCAPSNSALDEIVLRLL---------------NTG----IRDENIRSYTPKIVRIGL 415
RVLVCAPSN+A+DE++ +++ N G +R +S +++R L
Sbjct: 1994 RVLVCAPSNAAVDELMKKIILEFKEKCKDKKNPLGNCGDINLVRLGPEKSINNEVLRFSL 2053
Query: 416 --KAHHSVNSVAIDHLVEQKRDDSAADKQ------------------------KHGATRK 449
+ +H + H+ E R D Q K K
Sbjct: 2054 DSQVNHRMKKDLPSHVQEMHRRKEFLDHQLDELSRQRALCRGGKETQRQELDEKIAKVSK 2113
Query: 450 DRDSI--------------RSAILNEAVIVCSTLSFSGSALLSKLNHG-----FDVVIID 490
+R + +S I+ E+ ++C TLS SG LL G F VI+D
Sbjct: 2114 ERQELASKIKEVQGRPQKTQSIIILESHVICCTLSTSGGLLLESAFRGQGGVPFSCVIVD 2173
Query: 491 EAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQR------ 544
EA Q+ E TL PL C ++ LVGDP QLP TVIS A+ GY S+ R +
Sbjct: 2174 EAGQSCEVETLTPLIHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMARFCKLLEDSV 2233
Query: 545 -----AGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVE-DYTTRDWHEYRCFGPF 598
PV L QYRMHP++ FPS Y+ +L+ E + + DW F P+
Sbjct: 2234 EHNVIGRLPVLQLTVQYRMHPDICLFPSNYVYNRSLKTNRLTETNRCSSDWP----FQPY 2289
Query: 599 SFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQ 658
FD+ +G E + + S+IN+ E+ V+ + KLI + + + II+ Y+ Q
Sbjct: 2290 LVFDVGDGSERR--DNDSYINVQEIKLVMEII-KLIKDKRRDVTFRNIGIITHYKAQKTM 2346
Query: 659 FQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKK-SIGFLADYRRMNVGI 717
Q+ + F + VD TVD QGR+KD I +CVRA+ + SIGFLA +R+NV I
Sbjct: 2347 IQKDLDKEFDRKGPAEVD--TVDAFQGRQKDCVIVTCVRANAMQGSIGFLASLQRLNVTI 2404
Query: 718 TRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRV 755
TRAK S+ ++G TL E++HWN+L++ A+K+ + +
Sbjct: 2405 TRAKYSLFILGHLRTLMENQHWNHLIQDAQKRGAIVKT 2442
>gi|302422300|ref|XP_003008980.1| ATP-dependent helicase NAM7 [Verticillium albo-atrum VaMs.102]
gi|261352126|gb|EEY14554.1| ATP-dependent helicase NAM7 [Verticillium albo-atrum VaMs.102]
Length = 1041
Score = 199 bits (506), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 143/404 (35%), Positives = 207/404 (51%), Gaps = 47/404 (11%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSV-NSVAIDHLVEQK 433
+VLVCAPSN A+D++ R+ TG+ K+VR+ K+ V +SV+ L EQ
Sbjct: 465 QVLVCAPSNVAVDQLCERIHRTGL----------KVVRLTAKSREDVESSVSFLALHEQV 514
Query: 434 R-DDSAADKQKHGATRKDRDSIRSA---------------ILNEAVIVCSTLSFSGSALL 477
R +DS + K + + + S IL+ A +VC T +G L
Sbjct: 515 RMNDSNGELVKLAQLKTELGELSSQDEKKFKQLTKAAERDILHNADVVCCTCVGAGDPRL 574
Query: 478 SKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTS 537
SK+ F V+IDE+ Q+ EP ++PL GCKQV LVGD QL +++ A G S
Sbjct: 575 SKIK--FRNVLIDESTQSAEPECMIPLVLGCKQVVLVGDHKQLGPVIMNKKAAKAGLNQS 632
Query: 538 LFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRD----WHEYR 593
LF+RL L TQYRMHP + FPS FYD +L++G RD W
Sbjct: 633 LFERLVNLRLQPIRLNTQYRMHPCLSEFPSNMFYDGSLQNGVTHAQRLRRDVDFPWPVAD 692
Query: 594 CFGPFSFFDIHEGKESQPAGSGSWINIDE---VDFVLLLFHKLISMYPQLKSSSQLAIIS 650
P F+ + G E A S++N E V+ V+ F K + PQ + +I+
Sbjct: 693 T--PMMFWS-NLGNEEISASGTSYLNRTEASNVEKVVTRFFK-AGVKPQ-----DIGVIT 743
Query: 651 PYRHQVKQFQERFKE--TFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLA 708
PY Q + TF ES K V++ +VD QGREKD + SCVR+SD + IGFL+
Sbjct: 744 PYEGQRSYIVSTMQNTGTFKKESYKEVEVASVDAFQGREKDFIVLSCVRSSDNQGIGFLS 803
Query: 709 DYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
D RR+NVG+TRAK ++++G L + + W++L+ + + CL
Sbjct: 804 DPRRLNVGLTRAKYGLVILGNPKVLSKHELWHHLLVHFKDRKCL 847
>gi|414886782|tpg|DAA62796.1| TPA: hypothetical protein ZEAMMB73_068361 [Zea mays]
Length = 1273
Score = 199 bits (506), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 152/487 (31%), Positives = 242/487 (49%), Gaps = 68/487 (13%)
Query: 365 VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSV 424
V + +++ + +VLVCAPSN A+D++ ++ +TG+ K+VR+ K+ +V+S
Sbjct: 542 VYHMAKQGQGQVLVCAPSNVAVDQLAEKISSTGL----------KVVRLCAKSREAVSS- 590
Query: 425 AIDHL-------------------VEQKRDD----SAADKQKHGATRKDRDSIRSAILNE 461
++HL ++Q +D+ S++D++K+ A ++ + IL
Sbjct: 591 PVEHLTLHYQVRHLDTSEKSEFHKLQQLKDEQGELSSSDEKKYKALKR---ATEREILQS 647
Query: 462 AVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLP 521
A ++C T +G LS N F V+IDE+ QA EP L+PL G KQV LVGD QL
Sbjct: 648 ADVICCTCVGAGDPRLS--NFRFRQVLIDESTQATEPECLIPLVLGVKQVVLVGDHCQLG 705
Query: 522 ATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDV 581
++ A G SLF+RL G L+ QYRMHP + FPS FY+ L++G V
Sbjct: 706 PVIMCKKAARAGLAQSLFERLVILGVKPFRLQVQYRMHPCLSEFPSNCFYEGTLQNGVTV 765
Query: 582 -EDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQL 640
E +++ + FF + G+E A S++N E V K+++ + L
Sbjct: 766 NERHSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANV----EKIVTTF--L 819
Query: 641 KSS---SQLAIISPYRHQVKQFQERFKETFGVESQ--KVVDITTVDGCQGREKDVAIFSC 695
+S SQ+ +I+PY Q + Q K +++ +VD QGREKD I SC
Sbjct: 820 RSGVVPSQIGVITPYEGQRAYIVNYMSRNGSLRQQLYKEIEVASVDSFQGREKDYIILSC 879
Query: 696 VRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRV 755
VR+++ + IGFL D RR+NV +TRA+ I+++G L + WN+L+ ++ +CL V
Sbjct: 880 VRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNSLLTHYKEHECL--V 937
Query: 756 SKPYASFFSDENLESMRKNATTDN-----VQGADGHVPHDDETMHYANTGDADQGQADDI 810
P + +++ +K N + GA G MH AN G QA D
Sbjct: 938 EGPLNNL--KQSMVQFQKPKKIYNDRRLLLGGAQG--------MHGANFGAGASSQAADK 987
Query: 811 DNADGDA 817
+ G A
Sbjct: 988 RSGRGKA 994
>gi|346970142|gb|EGY13594.1| ATP-dependent helicase NAM7 [Verticillium dahliae VdLs.17]
Length = 1099
Score = 199 bits (506), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 143/404 (35%), Positives = 207/404 (51%), Gaps = 47/404 (11%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSV-NSVAIDHLVEQK 433
+VLVCAPSN A+D++ R+ TG+ K+VR+ K+ V +SV+ L EQ
Sbjct: 495 QVLVCAPSNVAVDQLCERIHRTGL----------KVVRLTAKSREDVESSVSFLALHEQV 544
Query: 434 R-DDSAADKQKHGATRKDRDSIRSA---------------ILNEAVIVCSTLSFSGSALL 477
R +DS + K + + + S IL+ A +VC T +G L
Sbjct: 545 RMNDSNGELVKLAQLKTELGELSSQDEKKFKQLTKAAERDILHNADVVCCTCVGAGDPRL 604
Query: 478 SKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTS 537
SK+ F V+IDE+ Q+ EP ++PL GCKQV LVGD QL +++ A G S
Sbjct: 605 SKIK--FRNVLIDESTQSAEPECMIPLVLGCKQVVLVGDHKQLGPVIMNKKAAKAGLNQS 662
Query: 538 LFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRD----WHEYR 593
LF+RL L TQYRMHP + FPS FYD +L++G RD W
Sbjct: 663 LFERLVNLRLQPIRLNTQYRMHPCLSEFPSNMFYDGSLQNGVTHAQRLRRDVDFPWPVAD 722
Query: 594 CFGPFSFFDIHEGKESQPAGSGSWINIDE---VDFVLLLFHKLISMYPQLKSSSQLAIIS 650
P F+ + G E A S++N E V+ V+ F K + PQ + +I+
Sbjct: 723 T--PMMFWS-NLGNEEISASGTSYLNRTEASNVEKVVTRFFK-AGVKPQ-----DIGVIT 773
Query: 651 PYRHQVKQFQERFKE--TFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLA 708
PY Q + TF ES K V++ +VD QGREKD + SCVR+SD + IGFL+
Sbjct: 774 PYEGQRSYIVSTMQNTGTFKKESYKEVEVASVDAFQGREKDFIVLSCVRSSDNQGIGFLS 833
Query: 709 DYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
D RR+NVG+TRAK ++++G L + + W++L+ + + CL
Sbjct: 834 DPRRLNVGLTRAKYGLVILGNPKVLSKHELWHHLLVHFKDRKCL 877
>gi|410921828|ref|XP_003974385.1| PREDICTED: regulator of nonsense transcripts 1-like [Takifugu
rubripes]
Length = 1099
Score = 199 bits (506), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 138/424 (32%), Positives = 222/424 (52%), Gaps = 45/424 (10%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + SR+ VLVCAPSN A+D++ ++ TG+ K+VR
Sbjct: 475 PGTGKTVTSATIVYHLSRQGNGPVLVCAPSNIAVDQLTEKIDKTGL----------KVVR 524
Query: 413 IGLKAHHSVNSVA-----------IDHL-----VEQKRDD----SAADKQKHGATRKDRD 452
+ K+ ++ S +D + ++Q +D+ S+AD++++ A + R
Sbjct: 525 LCAKSREAIESPVSFLALHNQISNMDSMPELQKLQQLKDETGELSSADEKRYRALK--RT 582
Query: 453 SIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVF 512
+ R ++N VI C+ + +G L+K+ F ++IDE+ QA EP +VP+ G KQ+
Sbjct: 583 AERELLMNADVICCTCVG-AGDPRLAKMQ--FRSILIDESTQATEPECMVPVVLGAKQLI 639
Query: 513 LVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYD 572
LVGD QL V+ A G SLF+RL G L+ QYRMHP + +FPS FY+
Sbjct: 640 LVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYE 699
Query: 573 EALEDGSDVEDYTTR--DWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
+L++G D + D+ + P FF + +G+E + S++N E V +
Sbjct: 700 GSLQNGVTAGDRIKKGFDFQWPQPEKPM-FFYVTQGQEEIASSGTSYLNRTEAANVEKIT 758
Query: 631 HKLISMYPQLKSSSQLAIISPYRHQVKQFQE--RFKETFGVESQKVVDITTVDGCQGREK 688
+L+ + Q+ II+PY Q + +F + + + V+I +VD QGREK
Sbjct: 759 TRLLKAGAK---PDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQQVEIASVDAFQGREK 815
Query: 689 DVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEK 748
D I SCVRA++ + IGFL D RR+NV +TRAK +++VG L + WNNL+ + ++
Sbjct: 816 DFIILSCVRANEHQGIGFLNDPRRLNVALTRAKYGVIIVGNPKALSKQPLWNNLLNNYKE 875
Query: 749 QDCL 752
Q L
Sbjct: 876 QKVL 879
>gi|255082057|ref|XP_002508247.1| predicted protein [Micromonas sp. RCC299]
gi|226523523|gb|ACO69505.1| predicted protein [Micromonas sp. RCC299]
Length = 1188
Score = 199 bits (506), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 131/382 (34%), Positives = 198/382 (51%), Gaps = 41/382 (10%)
Query: 371 RYRVRVLVC-APSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHL 429
R R ++C + SN A+D +V L G+R + RIG +V + +
Sbjct: 693 RNRTSPILCTSDSNIAVDNLVDGLSRAGVR----------VARIGRP--EAVRQDLMQFM 740
Query: 430 VEQKRDDSAADKQKHGATRKDRD-SIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVI 488
VE S A + KD+ + +L A +VC+T + +GS +L + + F +
Sbjct: 741 VE-----SIAGIEPGSNMSKDQQYQAINGVLRRAEVVCATCAGAGSDILERFS--FQACL 793
Query: 489 IDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYP 548
IDEA QA EPAT+VPL GC QV L+GD QLP T+IS A+ G GTSLF+R+ G
Sbjct: 794 IDEATQATEPATVVPLTKGCSQVVLIGDQKQLPPTIISREADAAGLGTSLFERMLARGIR 853
Query: 549 VKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR---DWHEYRCFGPFSFFDIHE 605
MLK QYRMHP + ++PS+ FY AL G+ DW P +F D+ +
Sbjct: 854 AFMLKVQYRMHPAIAAYPSKAFYSGALLSGTPPSARRAPMGFDWPVPAV--PLAFVDVPD 911
Query: 606 GKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVK-------- 657
G E + S N E V+ + KL + + + ++ I++PY QV+
Sbjct: 912 GYER--SDGSSQTNPVEAQKVVNIVKKLAAGHDVI--FGEIGIVTPYSAQVRAIKRLLNG 967
Query: 658 ---QFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMN 714
+ + RF + + +++ +VDG QGREK+V +F C RA+ ++GFLAD RR+N
Sbjct: 968 NKPEVRSRFDAPADPNTLQALEVCSVDGFQGREKEVIVFCCTRANPNGNVGFLADPRRVN 1027
Query: 715 VGITRAKSSILVVGCASTLRED 736
V +TRA+ ++++G TLR D
Sbjct: 1028 VMLTRARRGLIIIGNLGTLRRD 1049
>gi|414886783|tpg|DAA62797.1| TPA: hypothetical protein ZEAMMB73_068361 [Zea mays]
Length = 1272
Score = 199 bits (506), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 151/490 (30%), Positives = 243/490 (49%), Gaps = 68/490 (13%)
Query: 365 VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSV 424
V + +++ + +VLVCAPSN A+D++ ++ +TG+ K+VR+ K+ +V+S
Sbjct: 542 VYHMAKQGQGQVLVCAPSNVAVDQLAEKISSTGL----------KVVRLCAKSREAVSS- 590
Query: 425 AIDHL-------------------VEQKRDD----SAADKQKHGATRKDRDSIRSAILNE 461
++HL ++Q +D+ S++D++K+ A ++ + IL
Sbjct: 591 PVEHLTLHYQVRHLDTSEKSEFHKLQQLKDEQGELSSSDEKKYKALKR---ATEREILQS 647
Query: 462 AVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLP 521
A ++C T +G LS N F V+IDE+ QA EP L+PL G KQV LVGD QL
Sbjct: 648 ADVICCTCVGAGDPRLS--NFRFRQVLIDESTQATEPECLIPLVLGVKQVVLVGDHCQLG 705
Query: 522 ATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDV 581
++ A G SLF+RL G L+ QYRMHP + FPS FY+ L++G V
Sbjct: 706 PVIMCKKAARAGLAQSLFERLVILGVKPFRLQVQYRMHPCLSEFPSNCFYEGTLQNGVTV 765
Query: 582 -EDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQL 640
E +++ + FF + G+E A S++N E V K+++ + L
Sbjct: 766 NERHSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANV----EKIVTTF--L 819
Query: 641 KSS---SQLAIISPYRHQVKQFQERFKETFGVESQ--KVVDITTVDGCQGREKDVAIFSC 695
+S SQ+ +I+PY Q + Q K +++ +VD QGREKD I SC
Sbjct: 820 RSGVVPSQIGVITPYEGQRAYIVNYMSRNGSLRQQLYKEIEVASVDSFQGREKDYIILSC 879
Query: 696 VRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRV 755
VR+++ + IGFL D RR+NV +TRA+ I+++G L + WN+L+ ++ +CL V
Sbjct: 880 VRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNSLLTHYKEHECL--V 937
Query: 756 SKPYASFFSDENLESMRKNATTDN-----VQGADGHVPHDDETMHYANTGDADQGQADDI 810
P + +++ +K N + GA G MH AN G QA D
Sbjct: 938 EGPLNNL--KQSMVQFQKPKKIYNDRRLLLGGAQG--------MHGANFGAGASSQAADK 987
Query: 811 DNADGDAEMY 820
+ G + +
Sbjct: 988 RSGRGKGQSF 997
>gi|361128156|gb|EHL00106.1| putative Regulator of nonsense transcripts 1 like protein [Glarea
lozoyensis 74030]
Length = 898
Score = 199 bits (505), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 143/452 (31%), Positives = 223/452 (49%), Gaps = 57/452 (12%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNS-VAIDHLVEQK 433
+VLVCAPSN A+D++ R+ TG+ K+VR+ K+ V S V L EQ
Sbjct: 300 QVLVCAPSNVAVDQLCERIHRTGL----------KVVRLTAKSREDVESTVGFLSLHEQV 349
Query: 434 R-DDSAADKQKHGATRKDRDSIRSA---------------ILNEAVIVCSTLSFSGSALL 477
R +DS + K + + + S ILN A ++C T +G L
Sbjct: 350 RMNDSNLELTKLSQLKGELGELSSQDEKKFKTLTRAAEREILNSADVICCTCVGAGDPRL 409
Query: 478 SKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTS 537
+K+ F V+IDE+ Q+ EP ++PL GCKQV LVGD QL +++ A G S
Sbjct: 410 AKMK--FRTVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQS 467
Query: 538 LFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFG- 596
LF+RL G L QYRMHP + FPS FY+ +L++G ++ RD G
Sbjct: 468 LFERLVILGLAPIRLNVQYRMHPCLSQFPSNMFYEGSLQNGVTMQQRLRRDVDFPWPVGD 527
Query: 597 -PFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQ-LAIISPYRH 654
P F+ + G E A S++N E V K+++ + + Q + +I+PY
Sbjct: 528 TPMMFWS-NLGNEEISASGTSYLNRTEASNV----EKIVTRFFKAGVQPQDIGVITPYEG 582
Query: 655 Q----VKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADY 710
Q V Q TF E+ K +++ +VD QGREKD + SCVR++D + IGFL+D
Sbjct: 583 QRSFVVSSMQN--TGTFKKENYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGFLSDP 640
Query: 711 RRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDC------------LFRVSKP 758
RR+NV +TRAK ++++G L + W+ L+ ++++C L + S+P
Sbjct: 641 RRLNVALTRAKYGLVILGNPKVLSKHPLWHYLLLHFKERNCLVEGPLSNLQTSLLQFSRP 700
Query: 759 YASFFSDENLESMRKNATTDNVQGADGHVPHD 790
++ + + +++ + GA G P D
Sbjct: 701 KTTYRGPQRYQ--MAHSSFNGRSGAPGKAPQD 730
>gi|328865229|gb|EGG13615.1| helicase [Dictyostelium fasciculatum]
Length = 1162
Score = 199 bits (505), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 134/410 (32%), Positives = 203/410 (49%), Gaps = 38/410 (9%)
Query: 365 VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNS- 423
+VN + + ++LVCAPSN A+D++ +L + G+ K+VR+ K V+S
Sbjct: 584 LVNHGIKGKEKLLVCAPSNVAIDQLAGKLHSVGL----------KVVRLCSKLREEVSSP 633
Query: 424 ---VAIDHLVEQKRDDSAADKQKHGATRKD---------------RDSIRSAILNEAVIV 465
+ + H V Q +K A R++ + S+ IL EA ++
Sbjct: 634 VENLTLHHQVAQLDQYGKGVLRKFKALREETGELNPEDERKFLVLKGSLERNILKEADVI 693
Query: 466 CSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVI 525
C+T +G L + F V+IDEA QA EP L+PL G +QV LVGD QL ++
Sbjct: 694 CTTCVGAGDPRLRDIK--FPYVLIDEATQASEPECLIPLVLGARQVVLVGDHCQLGPVLL 751
Query: 526 SPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYT 585
+ G SLF+RL G+ L TQYRMHP + FPS FY+ L + D
Sbjct: 752 CKKVQEAGLSLSLFERLIHLGHHPFRLTTQYRMHPALSEFPSNTFYEGQLVNEISYRDRV 811
Query: 586 TRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSS-S 644
T + + FF G E + S+IN E L K+++ + +L + S
Sbjct: 812 TNNGFVWPHPNRPMFFHNSTGHEEISSSGTSFINRTEAT----LCEKIVTRFLELGTKPS 867
Query: 645 QLAIISPYRHQVKQFQERFKETFGVESQ--KVVDITTVDGCQGREKDVAIFSCVRASDKK 702
Q+ II+PY Q + T + S K +++ +VD QGREKD I SCVR+++ +
Sbjct: 868 QIGIITPYEGQRSFLVNNMQRTGRLPSDLYKEIEVASVDSFQGREKDFIILSCVRSNENQ 927
Query: 703 SIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
IGFL D RR+NV +TRA+ ++++G A L D WNNL+ + + L
Sbjct: 928 GIGFLQDPRRLNVALTRARYGLIILGNARVLSRDLLWNNLISHFKANEVL 977
>gi|425767683|gb|EKV06249.1| Regulator of nonsense transcript, putative [Penicillium digitatum
PHI26]
gi|425780378|gb|EKV18385.1| Regulator of nonsense transcript, putative [Penicillium digitatum
Pd1]
Length = 1079
Score = 198 bits (504), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 154/481 (32%), Positives = 229/481 (47%), Gaps = 61/481 (12%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNS-VAIDHLVEQK 433
+VLVCAPSN A+D++ R+ TG+ K VR+ K+ V S V L EQ
Sbjct: 469 QVLVCAPSNVAVDQLCERIHRTGL----------KTVRVTAKSREDVESAVGFLSLHEQV 518
Query: 434 R-DDSAADKQKHGATRKD------------RDSIRSA---ILNEAVIVCSTLSFSGSALL 477
R +DS + K + + + RSA IL A ++C T +G L
Sbjct: 519 RMNDSNIELVKLNQLKAELGELSSQDEKRLKQLTRSAEREILTNADVICCTCVGAGDPRL 578
Query: 478 SKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTS 537
SK F V+IDE+ Q+ EP ++PL GCKQV LVGD QL +++ A G S
Sbjct: 579 SKGK--FRTVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQS 636
Query: 538 LFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRD----WHEYR 593
LF+RL G L QYRMHP + FPS FY+ +L++G + D RD W
Sbjct: 637 LFERLVILGCSPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGITIADRVRRDVDFPWPIID 696
Query: 594 CFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYR 653
P F+ + G E A S++N E V + + Q + + II+PY
Sbjct: 697 --DPMMFWS-NLGNEEISASGTSYLNRTEATNVEKIVTRFFKAGVQPR---DIGIITPYE 750
Query: 654 HQVKQFQERFKE--TFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYR 711
Q + TF E K +++ +VD QGREKD I SCVR++D + IGFL+D R
Sbjct: 751 GQRSYIVSSMQATGTFKKEHYKEIEVASVDAFQGREKDYIILSCVRSNDHQGIGFLSDPR 810
Query: 712 RMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDC------------LFRVSKPY 759
R+NV +TRA+ ++++G L + WN L++ +++ C L + S+P
Sbjct: 811 RLNVALTRARFGLVILGNPKVLSKHPLWNCLLQHFKERHCLVEGPLSNLQESLIQFSRPK 870
Query: 760 ASFFSDENLE---SMRKNATTDNVQGADGHVPHDDETMHYANTGDADQGQADDIDNADGD 816
++ + + S NA + V G +G H +E Y ++G DD+ + G
Sbjct: 871 QAYRGPQRFQMSFSQTSNAPNNAVNGRNGG--HRNE---YHDSGSVVGYIPDDVSSVHGS 925
Query: 817 A 817
A
Sbjct: 926 A 926
>gi|255937245|ref|XP_002559649.1| Pc13g12330 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211584269|emb|CAP92302.1| Pc13g12330 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1079
Score = 198 bits (504), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 154/481 (32%), Positives = 229/481 (47%), Gaps = 61/481 (12%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNS-VAIDHLVEQK 433
+VLVCAPSN A+D++ R+ TG+ K VR+ K+ V S V L EQ
Sbjct: 469 QVLVCAPSNVAVDQLCERIHRTGL----------KTVRVTAKSREDVESAVGFLSLHEQV 518
Query: 434 R-DDSAADKQKHGATRKD------------RDSIRSA---ILNEAVIVCSTLSFSGSALL 477
R +DS + K + + + RSA IL A ++C T +G L
Sbjct: 519 RMNDSNIELVKLNQLKAELGELSSQDEKRLKQLTRSAEREILTNADVICCTCVGAGDPRL 578
Query: 478 SKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTS 537
SK F V+IDE+ Q+ EP ++PL GCKQV LVGD QL +++ A G S
Sbjct: 579 SKGK--FRTVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQS 636
Query: 538 LFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRD----WHEYR 593
LF+RL G L QYRMHP + FPS FY+ +L++G + D RD W
Sbjct: 637 LFERLVILGCSPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGITIADRVRRDVDFPWPIID 696
Query: 594 CFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYR 653
P F+ + G E A S++N E V + + Q K + II+PY
Sbjct: 697 --DPMMFWS-NLGNEEISASGTSYLNRTEATNVEKIVTRFFKAGVQPK---DIGIITPYE 750
Query: 654 HQVKQFQERFKE--TFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYR 711
Q + TF E K +++ +VD QGREKD I SCVR++D + IGFL+D R
Sbjct: 751 GQRSYIVSSMQANGTFKKEHYKEIEVASVDAFQGREKDYIILSCVRSNDHQGIGFLSDPR 810
Query: 712 RMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDC------------LFRVSKPY 759
R+NV +TRA+ ++++G L + WN L++ +++ C L + S+P
Sbjct: 811 RLNVALTRARFGLVILGNPKVLSKHPLWNCLLQHFKERHCLVEGPLSNLQESLIQFSRPK 870
Query: 760 ASFFSDENLE---SMRKNATTDNVQGADGHVPHDDETMHYANTGDADQGQADDIDNADGD 816
++ + + S N ++ V G +G H +E Y ++G DD+ + G
Sbjct: 871 QAYRGPQRFQMSFSQTNNVPSNAVNGRNGG--HRNE---YHDSGSVVGYIPDDVSSVHGS 925
Query: 817 A 817
A
Sbjct: 926 A 926
>gi|171693713|ref|XP_001911781.1| hypothetical protein [Podospora anserina S mat+]
gi|170946805|emb|CAP73609.1| unnamed protein product [Podospora anserina S mat+]
Length = 1090
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 149/467 (31%), Positives = 227/467 (48%), Gaps = 64/467 (13%)
Query: 355 PTTGNELKPEVV--NSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + + + +R +VLVCAPSN A+D++ R+ TG+ K+VR
Sbjct: 470 PGTGKTVTSATIIYHLARMNNSQVLVCAPSNVAVDQLCERIHRTGL----------KVVR 519
Query: 413 IGLKAHHSV-NSVAIDHLVEQKRD-------------DSAADKQKHGATRKDRDSIRSA- 457
+ K+ V +SV+ L EQ R +AA + ++ + R A
Sbjct: 520 LTAKSREDVESSVSFLALHEQVRLYKQSSELTNLNKLKAAAGELSSQDEKRFKQLTRQAE 579
Query: 458 --ILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVG 515
ILN A +VC T +G LSK+ F V+IDE+ Q+ EP ++PL GCKQV LVG
Sbjct: 580 REILNSADVVCCTCVGAGDPRLSKMK--FRNVLIDESTQSAEPECMIPLVLGCKQVVLVG 637
Query: 516 DPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEAL 575
D QL +++ A G SLF+RL + L QYRMHP + FPS FY+ +L
Sbjct: 638 DHKQLGPVIMNKKAAKAGLNQSLFERLVKLNLVPIRLNVQYRMHPCLSEFPSNMFYEGSL 697
Query: 576 EDGSDVEDYTTRD----WHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFH 631
++G + + +D W P F+ + G E A S++N E V
Sbjct: 698 QNGVTITERLRKDVDFPWPVAET--PMMFWS-NLGNEEISASGTSYLNRTEASNV----E 750
Query: 632 KLISMYPQLK-SSSQLAIISPYRHQVKQFQERFKE--TFGVESQKVVDITTVDGCQGREK 688
K+++ + + S + +I+PY Q + TF ES K V++ +VD QGREK
Sbjct: 751 KIVTRFFKAGVKPSDIGVITPYEGQRSYIVSTMQNTGTFKKESYKEVEVASVDAFQGREK 810
Query: 689 DVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEK 748
D + SCVR++D + IGFL+D RR+NV +TRAK ++++G L + + W++L+ +
Sbjct: 811 DFIVLSCVRSNDNQGIGFLSDPRRLNVALTRAKYGLVIIGNPKVLSKHELWHHLLVHFKD 870
Query: 749 QDC------------LFRVSKPYASFFSDENLESMRKNATTDNVQGA 783
+ C L + S+P SF R NA +V G
Sbjct: 871 RKCLVEGPLTNLQTSLIQFSRPKMSF-------RPRHNAQAQHVSGG 910
>gi|211828438|gb|AAH58109.2| Setx protein [Mus musculus]
Length = 825
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 149/465 (32%), Positives = 219/465 (47%), Gaps = 94/465 (20%)
Query: 375 RVLVCAPSNSALDEIVLRLL---------------NTG----IRDENIRSYTPKIVRIGL 415
RVLVCAPSN+A+DE++ +++ N G +R +S ++++ L
Sbjct: 157 RVLVCAPSNAAVDELMKKIILEFKEKCKDKKNPLGNCGDINLVRLGPEKSINTEVLKFSL 216
Query: 416 --KAHHSVNSVAIDHLVEQKRDDSAADKQKHGATR------------------------K 449
+ +H + H+ E R D Q +R K
Sbjct: 217 DSQVNHRMKKDLPSHIQEMLRRKEILDAQLDELSRQRALCRGGREMQRQELDEHIAIVSK 276
Query: 450 DRDSIRS--------------AILNEAVIVCSTLSFSGSALLSKLNHG-----FDVVIID 490
+R + S I+ E+ ++C TLS SG LL G F VI+D
Sbjct: 277 ERQELASKIKEVQGRPQRAQNTIILESHVICCTLSTSGGLLLESAFRGQGGVPFSCVIVD 336
Query: 491 EAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQR------ 544
EA Q+ E TL PL C ++ LVGDP QLP TVIS A+ GY S+ R +
Sbjct: 337 EAGQSCEVETLSPLIHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMARFCKLLEENV 396
Query: 545 -----AGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRC----- 594
PV L QYRMHP++ FPS Y++ L+ T R RC
Sbjct: 397 EQNMIGRLPVLQLTIQYRMHPDICLFPSNYVYNKNLK--------TNRLTESIRCSSEWP 448
Query: 595 FGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRH 654
F P+ FD+ +G E + + S+IN+ E+ V+ + KLI + S + II+ Y+
Sbjct: 449 FQPYLVFDVGDGSERR--DNDSYINVQEIKLVMEII-KLIKEKRKDISFRNIGIITHYKA 505
Query: 655 QVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASD-KKSIGFLADYRRM 713
Q Q+ ++ F + VD TVD QGR+KD I +CVRAS + SIGFLA +R+
Sbjct: 506 QKTMIQKDLEKEFDKKGPAEVD--TVDAFQGRQKDCIIVTCVRASAVQGSIGFLASLQRL 563
Query: 714 NVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRVSKP 758
NV ITRAK S+ ++G TL E++HW L++ A+K+ + + S P
Sbjct: 564 NVTITRAKYSLFILGHLRTLMENQHWYELIQDAQKRGAIIKTSDP 608
>gi|258570655|ref|XP_002544131.1| ATP-dependent helicase NAM7 [Uncinocarpus reesii 1704]
gi|237904401|gb|EEP78802.1| ATP-dependent helicase NAM7 [Uncinocarpus reesii 1704]
Length = 1075
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 140/409 (34%), Positives = 206/409 (50%), Gaps = 57/409 (13%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLV--EQ 432
+VLVCAPSN A+D++ + TG+ K VR+ K+ V S + HL EQ
Sbjct: 468 QVLVCAPSNVAVDQLCECIHRTGL----------KTVRVTAKSREDVES-PVRHLSLHEQ 516
Query: 433 KRD-DSAADKQKHGATRKDRDSIRSA---------------ILNEAVIVCSTLSFSGSAL 476
R+ DS + K + + + S IL A ++C T +G
Sbjct: 517 VRNNDSNVELMKLTQLKNELGELSSQDEKKFKQLTRAAEKEILTNADVICCTCVGAGDPR 576
Query: 477 LSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGT 536
L+K F V+IDE+ Q+ EP ++PL GCKQV LVGD +QL +++ A G
Sbjct: 577 LAKFK--FRTVLIDESTQSSEPECMIPLVMGCKQVVLVGDHLQLGPVIMNKKAAKAGLNQ 634
Query: 537 SLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRD----WHEY 592
SLF+RL G L QYRMHP + SFPS FYD +L++G +D +D W
Sbjct: 635 SLFERLVILGCAPIRLNVQYRMHPCLSSFPSNMFYDGSLQNGVTSDDRLLKDVDFPW--- 691
Query: 593 RCFGPFS----FFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLK-SSSQLA 647
P S F + G E A S++N E V K+++ + + S +
Sbjct: 692 ----PISDKPMMFWSNLGNEEISASGTSYLNRTEAANV----EKIVTRFFKAGVKPSAIG 743
Query: 648 IISPYRHQ----VKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKS 703
II+PY Q V Q T+ E+ K +++ +VD QGREKD + SCVR++D +
Sbjct: 744 IITPYEGQRSYVVSSMQ--LNGTYKKEAYKEIEVASVDAFQGREKDFIVLSCVRSNDHQG 801
Query: 704 IGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
IGFL+D RR+NV +TRAK ++++G L + WN L++ ++QDCL
Sbjct: 802 IGFLSDPRRLNVALTRAKYGLVILGNPKVLSKHPLWNYLLRHFKEQDCL 850
>gi|211828990|gb|AAH79604.2| Setx protein [Mus musculus]
Length = 837
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 149/465 (32%), Positives = 219/465 (47%), Gaps = 94/465 (20%)
Query: 375 RVLVCAPSNSALDEIVLRLL---------------NTG----IRDENIRSYTPKIVRIGL 415
RVLVCAPSN+A+DE++ +++ N G +R +S ++++ L
Sbjct: 169 RVLVCAPSNAAVDELMKKIILEFKEKCKDKKNPLGNCGDINLVRLGPEKSINTEVLKFSL 228
Query: 416 --KAHHSVNSVAIDHLVEQKRDDSAADKQKHGATR------------------------K 449
+ +H + H+ E R D Q +R K
Sbjct: 229 DSQVNHRMKKDLPSHIQEMLRRKEILDAQLDELSRQRALCRGGREMQRQELDEHIAIVSK 288
Query: 450 DRDSIRS--------------AILNEAVIVCSTLSFSGSALLSKLNHG-----FDVVIID 490
+R + S I+ E+ ++C TLS SG LL G F VI+D
Sbjct: 289 ERQELASKIKEVQGRPQRAQNTIILESHVICCTLSTSGGLLLESAFRGQGGVPFSCVIVD 348
Query: 491 EAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQR------ 544
EA Q+ E TL PL C ++ LVGDP QLP TVIS A+ GY S+ R +
Sbjct: 349 EAGQSCEVETLSPLIHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMARFCKLLEENV 408
Query: 545 -----AGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRC----- 594
PV L QYRMHP++ FPS Y++ L+ T R RC
Sbjct: 409 EQNMIGRLPVLQLTIQYRMHPDICLFPSNYVYNKNLK--------TNRLTESIRCSSEWP 460
Query: 595 FGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRH 654
F P+ FD+ +G E + + S+IN+ E+ V+ + KLI + S + II+ Y+
Sbjct: 461 FQPYLVFDVGDGSERR--DNDSYINVQEIKLVMEII-KLIKEKRKDISFRNIGIITHYKA 517
Query: 655 QVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASD-KKSIGFLADYRRM 713
Q Q+ ++ F + VD TVD QGR+KD I +CVRAS + SIGFLA +R+
Sbjct: 518 QKTMIQKDLEKEFDKKGPAEVD--TVDAFQGRQKDCIIVTCVRASAVQGSIGFLASLQRL 575
Query: 714 NVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRVSKP 758
NV ITRAK S+ ++G TL E++HW L++ A+K+ + + S P
Sbjct: 576 NVTITRAKYSLFILGHLRTLMENQHWYELIQDAQKRGAIIKTSDP 620
>gi|296191064|ref|XP_002743464.1| PREDICTED: probable helicase senataxin [Callithrix jacchus]
Length = 2678
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 145/458 (31%), Positives = 216/458 (47%), Gaps = 86/458 (18%)
Query: 375 RVLVCAPSNSALDEIVLRLL---------------NTG----IRDENIRSYTPKIVRIGL 415
RVLVCAPSN+A+DE++ +++ N G +R +S ++++ L
Sbjct: 2003 RVLVCAPSNAAVDELMKKIILEFKEKCKDKKNPLGNCGDINLVRLGPEKSINNEVLKFSL 2062
Query: 416 --KAHHSVNSVAIDHLVEQKRDDSAADKQ------------------------KHGATRK 449
+ +H + H+ E R D Q K K
Sbjct: 2063 DSQVNHRMKKDLPSHVQEMHRRKEFLDYQLDELSRQRALCRGGREIQRQELDEKISKVSK 2122
Query: 450 DRDSIRSAI--------------LNEAVIVCSTLSFSGSALLSKLNHG-----FDVVIID 490
+R + S I + E+ ++C TLS SG LL G F VI+D
Sbjct: 2123 ERQELASKIKEVQGRPQKTQNNIILESHVICCTLSTSGGLLLESAFRGQGGVPFSCVIVD 2182
Query: 491 EAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQR------ 544
EA Q+ E TL PL C ++ LVGDP QLP TVIS A+ GY S+ R +
Sbjct: 2183 EAGQSCEIETLTPLIHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMARFCKLLEENV 2242
Query: 545 -----AGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDY-TTRDWHEYRCFGPF 598
+ P+ L QYRMHP++ FPS Y+ L+ E + DW F P+
Sbjct: 2243 EYNMISRLPILRLTIQYRMHPDICLFPSNYIYNRNLKTNRQTETVRCSSDWP----FQPY 2298
Query: 599 SFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQ 658
FD+ +G E + + S++N+ E+ V+ L KLI + S + II+ Y+ Q
Sbjct: 2299 LVFDVGDGSERR--DNDSYVNVQEIKLVIELI-KLIKDKRKDVSFRNIGIITHYKAQKTM 2355
Query: 659 FQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKK-SIGFLADYRRMNVGI 717
Q+ + F + VD TVD QGR+KD I +CVRA+ + SIGFLA +R+NV I
Sbjct: 2356 IQKDLDKEFDRKGPAEVD--TVDAFQGRQKDCVIVTCVRANTMQGSIGFLASLQRLNVTI 2413
Query: 718 TRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRV 755
TRAK S+ ++G TL E++HWN L++ A+K+ + +
Sbjct: 2414 TRAKYSLFILGHLRTLMENQHWNQLIQDAQKRGAIIKT 2451
>gi|28386070|gb|AAH46382.1| Setx protein [Mus musculus]
Length = 902
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 149/465 (32%), Positives = 219/465 (47%), Gaps = 94/465 (20%)
Query: 375 RVLVCAPSNSALDEIVLRLL---------------NTG----IRDENIRSYTPKIVRIGL 415
RVLVCAPSN+A+DE++ +++ N G +R +S ++++ L
Sbjct: 234 RVLVCAPSNAAVDELMKKIILEFKEKCKDKKNPLGNCGDINLVRLGPEKSINTEVLKFSL 293
Query: 416 --KAHHSVNSVAIDHLVEQKRDDSAADKQKHGATR------------------------K 449
+ +H + H+ E R D Q +R K
Sbjct: 294 DSQVNHRMKKDLPSHIQEMLRRKEILDAQLDELSRQRALCRGGREMQRQELDEHIAIVSK 353
Query: 450 DRDSIRS--------------AILNEAVIVCSTLSFSGSALLSKLNHG-----FDVVIID 490
+R + S I+ E+ ++C TLS SG LL G F VI+D
Sbjct: 354 ERQELASKIKEVQGRPQRAQNTIILESHVICCTLSTSGGLLLESAFRGQGGVPFSCVIVD 413
Query: 491 EAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQR------ 544
EA Q+ E TL PL C ++ LVGDP QLP TVIS A+ GY S+ R +
Sbjct: 414 EAGQSCEVETLSPLIHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMARFCKLLEENV 473
Query: 545 -----AGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRC----- 594
PV L QYRMHP++ FPS Y++ L+ T R RC
Sbjct: 474 EQNMIGRLPVLQLTIQYRMHPDICLFPSNYVYNKNLK--------TNRLTESIRCSSEWP 525
Query: 595 FGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRH 654
F P+ FD+ +G E + + S+IN+ E+ V+ + KLI + S + II+ Y+
Sbjct: 526 FQPYLVFDVGDGSERR--DNDSYINVQEIKLVMEII-KLIKEKRKDISFRNIGIITHYKA 582
Query: 655 QVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASD-KKSIGFLADYRRM 713
Q Q+ ++ F + VD TVD QGR+KD I +CVRAS + SIGFLA +R+
Sbjct: 583 QKTMIQKDLEKEFDKKGPAEVD--TVDAFQGRQKDCIIVTCVRASAVQGSIGFLASLQRL 640
Query: 714 NVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRVSKP 758
NV ITRAK S+ ++G TL E++HW L++ A+K+ + + S P
Sbjct: 641 NVTITRAKYSLFILGHLRTLMENQHWYELIQDAQKRGAIIKTSDP 685
>gi|320592037|gb|EFX04476.1| regulator of nonsense [Grosmannia clavigera kw1407]
Length = 1095
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 135/405 (33%), Positives = 209/405 (51%), Gaps = 49/405 (12%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSV-NSVAIDHLVEQK 433
+VLVCAPSN A+D++ R+ TG+ K+VR+ K+ V +SV+ L EQ
Sbjct: 499 QVLVCAPSNVAVDQLCERVHRTGL----------KVVRLTAKSREDVESSVSFLALHEQV 548
Query: 434 RDD-------------------SAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGS 474
R + S+ D++K K + ILN A +VC T +G
Sbjct: 549 RMNDTNVELTRLQLLKNEVGELSSLDEKKFKQLTK---AAEKEILNNADVVCCTCVGAGD 605
Query: 475 ALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGY 534
L+K+ F V+IDE+ Q+ EP ++PL GCKQV LVGD QL +++ A G
Sbjct: 606 PRLAKMK--FRNVLIDESTQSAEPECMIPLVLGCKQVVLVGDHKQLGPVIMNKKAAKAGL 663
Query: 535 GTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRD----WH 590
SLF+RL + G+ L QYRMHP + +FPS FY+ +L++G +++ +D W
Sbjct: 664 NQSLFERLVKLGFAPIRLNVQYRMHPHLAAFPSNMFYEGSLQNGVTIQERLRKDVDFPWP 723
Query: 591 EYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLK-SSSQLAII 649
P F+ + G E A S++N E V K+++ + + + + +I
Sbjct: 724 VVDT--PMMFWS-NLGNEEISASGTSYLNRTEASNV----EKVVTRFFKAGVKPADIGVI 776
Query: 650 SPYRHQVKQFQERFKE--TFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFL 707
+PY Q + TF ES K V++ +VD QGREKD + SCVR+++ + IGFL
Sbjct: 777 TPYEGQRSYIVTTMQNTGTFKKESYKEVEVASVDAFQGREKDYIVLSCVRSNENQGIGFL 836
Query: 708 ADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
+D RR+NV +TRAK I+++G L + + W +L+ + CL
Sbjct: 837 SDPRRLNVALTRAKYGIVILGNPKVLAKHELWYHLLVHFKDHKCL 881
>gi|395844356|ref|XP_003794928.1| PREDICTED: probable helicase senataxin [Otolemur garnettii]
Length = 2681
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 145/458 (31%), Positives = 216/458 (47%), Gaps = 86/458 (18%)
Query: 375 RVLVCAPSNSALDEIVLRLL---------------NTG----IRDENIRSYTPKIVRIGL 415
RVLVCAPSN+A+DE++ +++ N G +R +S ++++ L
Sbjct: 2009 RVLVCAPSNAAVDELMKKIILEFKEKCKDKKNPLGNCGDINLVRLGPEKSINNEVLKFSL 2068
Query: 416 --KAHHSVNSVAIDHLVEQKRDDSAADKQ------------------------KHGATRK 449
+ +H + H+ E R D Q K K
Sbjct: 2069 DSQVNHRMKKDLPSHVQEMHRRKEFLDHQLDELSRQRALCRGGREIQRQELDEKIAKVSK 2128
Query: 450 DRDSI--------------RSAILNEAVIVCSTLSFSGSALLSKLNHG-----FDVVIID 490
+R + +S I+ E+ ++C TLS SG LL G F VI+D
Sbjct: 2129 ERQELASKIKEVQGRPQKTQSIIILESHVICCTLSTSGGLLLESAFRGQGGVPFSCVIVD 2188
Query: 491 EAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQR------ 544
EA Q+ E TL PL C ++ LVGDP QLP TVIS A+ GY S+ R +
Sbjct: 2189 EAGQSCEVETLTPLIHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMARFYKLLEENV 2248
Query: 545 -----AGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDY-TTRDWHEYRCFGPF 598
PV L QYRMHP++ FPS Y+ L+ E + DW F P+
Sbjct: 2249 EHNMIGRLPVLQLTVQYRMHPDICLFPSSYVYNRNLKTNRQTEAIRCSADWP----FQPY 2304
Query: 599 SFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQ 658
FD+ +G E + + S+IN+ E+ V+ + KLI + + + II+ Y+ Q
Sbjct: 2305 LVFDVGDGSERR--DNDSYINVQEIKLVMEII-KLIKEKRKDVTFRNIGIITHYKAQKTM 2361
Query: 659 FQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKK-SIGFLADYRRMNVGI 717
Q+ + F + VD TVD QGR+KD I +CVRA+ + SIGFLA +R+NV I
Sbjct: 2362 IQKDLDKEFDRKGPAEVD--TVDAFQGRQKDCVIVTCVRANAMQGSIGFLASLQRLNVTI 2419
Query: 718 TRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRV 755
TRAK S+ ++G TL E++HWN L++ A+K+ + +
Sbjct: 2420 TRAKYSLFILGHLRTLMENQHWNYLIQDAQKRGAIIKT 2457
Score = 46.2 bits (108), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 115/291 (39%), Gaps = 67/291 (23%)
Query: 52 REVKDTYKDVDDYLATFEPLL----FEEVKAQIIQKKDEEEVQEWKLRLV----MECGEA 103
R V ++D DY F PL+ FE V + + ++E LR +C E
Sbjct: 1738 RPVPVRFQDCGDYFNVFFPLMVLNTFETVAQEWLSSPNKEIFYRLNLRKFPADYKKCWEF 1797
Query: 104 DGFHLPSVTY--EADEVESISP--NDLLLLSKEEFKEGSTFPTTYAFALVEHCQANLLRL 159
V Y E D + + P NDL+ L E + G T V +C +L
Sbjct: 1798 -------VVYLEEGDLAKQLHPKENDLVFLVPER-QNGEKKDT------VRNCTKDLYE- 1842
Query: 160 RMYLAGEVIHINKDAV----KSQRLLNIHS--------------LITSSVSAVEKRLFSL 201
Y G V + +V KS+ L+I + ++ SS+ +++L ++
Sbjct: 1843 --YHCGYVHKFRRTSVMRNGKSECCLSIQTQDNLPANLNEFVTCIVISSLVTTQRKLKAM 1900
Query: 202 KICSLSTIAREYLALRSVGSLPF----KDLILSASEKSSGSQDQSWKIPGLLHEYIKENH 257
+ S R LA + P KDL+ + SE+ I L ++ ++
Sbjct: 1901 SLLS----GRNQLARAVLNPNPMDFCTKDLLTTTSER----------IIAYLRDFNEDQK 1946
Query: 258 NA--SQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHS 306
A + + LI GPPGTGK++TI+GLL +L R HS
Sbjct: 1947 KAIETAYAMVKHSPSVAKICLIHGPPGTGKSKTIVGLLYRLLTENQRRGHS 1997
>gi|148676460|gb|EDL08407.1| amyotrophic lateral sclerosis 4 homolog (human) [Mus musculus]
Length = 846
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 149/465 (32%), Positives = 219/465 (47%), Gaps = 94/465 (20%)
Query: 375 RVLVCAPSNSALDEIVLRLL---------------NTG----IRDENIRSYTPKIVRIGL 415
RVLVCAPSN+A+DE++ +++ N G +R +S ++++ L
Sbjct: 178 RVLVCAPSNAAVDELMKKIILEFKEKCKDKKNPLGNCGDINLVRLGPEKSINTEVLKFSL 237
Query: 416 --KAHHSVNSVAIDHLVEQKRDDSAADKQKHGATR------------------------K 449
+ +H + H+ E R D Q +R K
Sbjct: 238 DSQVNHRMKKDLPSHIQEMLRRKEILDAQLDELSRQRALCRGGREMQRQELDEHIAIVSK 297
Query: 450 DRDSIRS--------------AILNEAVIVCSTLSFSGSALLSKLNHG-----FDVVIID 490
+R + S I+ E+ ++C TLS SG LL G F VI+D
Sbjct: 298 ERQELASKIKEVQGRPQRAQNTIILESHVICCTLSTSGGLLLESAFRGQGGVPFSCVIVD 357
Query: 491 EAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQR------ 544
EA Q+ E TL PL C ++ LVGDP QLP TVIS A+ GY S+ R +
Sbjct: 358 EAGQSCEVETLSPLIHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMARFCKLLEENV 417
Query: 545 -----AGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRC----- 594
PV L QYRMHP++ FPS Y++ L+ T R RC
Sbjct: 418 EQNMIGRLPVLQLTIQYRMHPDICLFPSNYVYNKNLK--------TNRLTESIRCSSEWP 469
Query: 595 FGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRH 654
F P+ FD+ +G E + + S+IN+ E+ V+ + KLI + S + II+ Y+
Sbjct: 470 FQPYLVFDVGDGSERR--DNDSYINVQEIKLVMEII-KLIKEKRKDISFRNIGIITHYKA 526
Query: 655 QVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASD-KKSIGFLADYRRM 713
Q Q+ ++ F + VD TVD QGR+KD I +CVRAS + SIGFLA +R+
Sbjct: 527 QKTMIQKDLEKEFDKKGPAEVD--TVDAFQGRQKDCIIVTCVRASAVQGSIGFLASLQRL 584
Query: 714 NVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRVSKP 758
NV ITRAK S+ ++G TL E++HW L++ A+K+ + + S P
Sbjct: 585 NVTITRAKYSLFILGHLRTLMENQHWYELIQDAQKRGAIIKTSDP 629
>gi|359070644|ref|XP_002691695.2| PREDICTED: LOW QUALITY PROTEIN: probable helicase senataxin [Bos
taurus]
Length = 2663
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 213/774 (27%), Positives = 340/774 (43%), Gaps = 124/774 (16%)
Query: 52 REVKDTYKDVDDYLATFEPLL----FEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGFH 107
R V ++D DY F PL+ FE V + I ++E+ + LR G+ +
Sbjct: 1722 RRVPIRFQDCGDYFNVFFPLMVLNTFETVAQEWISSPNKEKFHQLHLRKFP--GDYKKYW 1779
Query: 108 LPSVTYEADEV-ESISP--NDLLLLSKEEFKEGSTFPTTYAFALVEHCQANLLRLRMYLA 164
V E E+ + + P NDL+ L E E L + C+ + +
Sbjct: 1780 EFVVYLEECELAKQLHPRENDLVFLVPERLNEEKK--DLEWSHLEDACEYYCGYVHKFRR 1837
Query: 165 GEVIHINK----DAVKSQRLLNIH------SLITSSVSAVEKRLFSLKICSLSTIAREYL 214
V+H K ++++Q L ++ + SS+ +++L ++ + S R L
Sbjct: 1838 TSVMHNGKFECSVSIQTQDNLPVNLNELVKCFVISSLVTTQRKLKAMSLLS----GRNQL 1893
Query: 215 ALRSVGSLPF----KDLILSASEKSSGSQDQSWKIPGLLHEYIKENHNASQLEAIHEGLL 270
A + P KDL + SE+ + Y+K+ N Q +AI
Sbjct: 1894 ARAILNPNPMDFCTKDLPTATSER--------------IVAYLKD-FNEDQKKAIETACA 1938
Query: 271 R-------KAFVLIQGPPGTGKTQTILGLLSAILHATPARVHS-KGGLREIKRGPEL--- 319
LI GPPGTGK++TI+G+L +L R +S + +IK+ L
Sbjct: 1939 MVKHSPSVAKICLIHGPPGTGKSKTIVGILYRLLTENQRRGYSDENSNAKIKQNRVLVCA 1998
Query: 320 PMHEKYNHWGRASPWLVGANPRDNIMPID--GDDGFF-----PTTGNELKPEVVNSSRRY 372
P + + + +D P+ GD + NE+ ++S +
Sbjct: 1999 PSNAAVDELMKKIILEFKEKCKDKKNPMGNCGDINLVRLGPEKSINNEVLKFSLDSQVNH 2058
Query: 373 RVRVLVCAPS------------NSALDEIV-LRLLNTGIRDENIRSYTPKIVRIGLKAHH 419
R++ + PS + LDE+ R L G R+ + KI R+
Sbjct: 2059 RMKKDL--PSHVQEMHKRKEFLDHQLDELSRQRALCRGGRESQRQELDGKIARVS----- 2111
Query: 420 SVNSVAIDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSK 479
+++++ ++ K+ G +K + I IL +I C TLS SG LL
Sbjct: 2112 -----------KERQELASKIKEVQGRPQKTQSII---ILESHIICC-TLSTSGGLLLEA 2156
Query: 480 LNHG-----FDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGY 534
G F VI+DEA Q+ E TL PL C ++ LVGDP QLP TVIS A+ GY
Sbjct: 2157 AFRGQGGVPFSCVIVDEAGQSCEVETLTPLIHRCNKLVLVGDPKQLPPTVISVKAQDYGY 2216
Query: 535 GTSLFKRLQR-----------AGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVE- 582
S+ R + PV L QYRMHP++ FPS YD L E
Sbjct: 2217 DQSMMARFHKLLEESVEHNMIGRLPVLQLTIQYRMHPDICLFPSSYIYDGILRTNRGTET 2276
Query: 583 DYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKS 642
+ DW F P+ FD+ +G E + + S++N+ E+ V+ L KLI + +
Sbjct: 2277 SRCSSDWP----FQPYLVFDVGDGLERR--DNDSYVNVQEIKLVMELI-KLIKDKRRDVT 2329
Query: 643 SSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRA-SDK 701
+ II+ Y+ Q Q+ + F + + ++ TVD QGR+KD I +CVRA + +
Sbjct: 2330 FRNIGIITHYKAQKTMIQKDLDKEF--DRKGAAEVDTVDAFQGRQKDCVIVTCVRANATQ 2387
Query: 702 KSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRV 755
SIGFLA +R+NV ITRAK S+ ++G TL E++HW +L++ A+K+ + +
Sbjct: 2388 GSIGFLASLQRLNVTITRAKYSLFILGHLRTLVENRHWYHLIQDAQKRGAIIKT 2441
>gi|452987990|gb|EME87745.1| hypothetical protein MYCFIDRAFT_148374 [Pseudocercospora fijiensis
CIRAD86]
Length = 1091
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 144/474 (30%), Positives = 234/474 (49%), Gaps = 58/474 (12%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENI--RSYTPKIVRIGLKAHH---SVNSVAID-- 427
+VLVCAPSN A+D++ R+ TG++ + +S +G + H S+N ++
Sbjct: 497 QVLVCAPSNVAVDQLCERIHITGLKVVRVTAKSREDAESNVGFLSLHRQVSMNDTNVELS 556
Query: 428 ---HLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGF 484
L +++ + S+ D++K A + + IL A ++C T +G L+K F
Sbjct: 557 KLKQLKDEQGELSSQDEKKFKALTR---AAEREILQNADVICCTCVGAGDPRLAKFK--F 611
Query: 485 DVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQR 544
V+IDE+ Q+ EP ++PL GCKQV LVGD QL +++ A G SLF+RL
Sbjct: 612 RTVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVV 671
Query: 545 AGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRD----WHEYRCFGPFSF 600
G L+ QYRMHP + FPS FY+ +L++G ++ +D W P F
Sbjct: 672 LGCAPIRLQVQYRMHPCLSEFPSNMFYEGSLQNGITMQQRLRKDVDFPWPVAD--SPMMF 729
Query: 601 FDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLK-SSSQLAIISPYRHQVKQF 659
+ + G E A S++N E V K+++ + + S S + II+PY Q
Sbjct: 730 WS-NLGNEEISASGTSYLNRTEAQNV----EKIVTRFFKAGVSPSAIGIITPYEGQRSYV 784
Query: 660 QERFKE--TFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGI 717
+ ++ TF E K +++ +VD QGREKD + SCVR++D + IGFL+D RR+NV +
Sbjct: 785 VQSMQQTGTFKKEHYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGFLSDPRRLNVAL 844
Query: 718 TRAKSSILVVGCASTLREDKHWNNLVKSAEKQDC------------LFRVSKPYASFFSD 765
TRAK +++G L + W+ L+ ++++C L + S+P S+
Sbjct: 845 TRAKYGCVILGNPKVLSKHPLWHYLLLHFKERNCLVEGPLNNLQVSLLQFSRPKTSYRGP 904
Query: 766 ENLE-------------SMRKNATTDNVQGAD----GHVPHDDETMHYANTGDA 802
+ + R N D GAD G++P D ++H + G A
Sbjct: 905 QRYQMAYQHANHMAAATGNRMNGRRDGPPGADGSVVGYIPDDVSSVHSSALGGA 958
>gi|378756061|gb|EHY66086.1| hypothetical protein NERG_00782 [Nematocida sp. 1 ERTm2]
Length = 1370
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 154/482 (31%), Positives = 244/482 (50%), Gaps = 93/482 (19%)
Query: 325 YNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNSSRRY----RVRVLVCA 380
Y+ ++ V + NI I G P TG K + V+S Y RVLVCA
Sbjct: 921 YDQLNKSQQVAVSTALKKNITLIQGP----PGTG---KTKTVSSMIAYFLLQNCRVLVCA 973
Query: 381 PSNSALDEIV--------------LRL---------------LNTGIRDENIRSYTPKIV 411
PSN+A+D +V +R+ +N G EN+++ +P +V
Sbjct: 974 PSNAAVDMLVESGSIWKTIPDCKWIRISISGNRICDEGDEAVVNKGELMENLQN-SPSLV 1032
Query: 412 RIGLKAHHSVNSVAID---HLVEQKRDDS--AADKQKHGATRKDR-DSIRSAI------- 458
+ + + N+ + D L +K +S + + +T D+ S+R
Sbjct: 1033 Q-SINVQTTPNNYSTDPKNKLKTEKTRESEHTSPNVSYTSTANDKFASVREPSRKENKDE 1091
Query: 459 LNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPV 518
+N A +V TLS +GS++ ++ FDV+IIDEA QA EP+TL+PL T ++ LVGDP+
Sbjct: 1092 INRAQLVFCTLSMAGSSVFNQ--SPFDVLIIDEACQATEPSTLIPLRTAPTRIILVGDPM 1149
Query: 519 QLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDG 578
QLP T+IS + +LF+RL + P+ +L TQYRM+ + F S +FY+ L DG
Sbjct: 1150 QLPPTIIS---QSKDLSVTLFERLSESITPI-LLDTQYRMNSIISKFASMQFYENRLRDG 1205
Query: 579 SDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYP 638
+E PF+F D +E++ N E++ V+L F + +
Sbjct: 1206 VSLESEL-----------PFAFIDASGTEETE---GKDIFNRKEIN-VILQFSSMAA--- 1247
Query: 639 QLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRA 698
K+ + IISPY+ QV Q ++ K +DI+TVDG QG+EKD I S VR+
Sbjct: 1248 --KAYDTVGIISPYKGQVGQLKKVIKG---------MDISTVDGFQGQEKDCIIISTVRS 1296
Query: 699 SDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRVSKP 758
K IGFL D RRMNV +TRA+ ++++VG S L++D W +L+K ++ + +++ +
Sbjct: 1297 ---KKIGFLNDIRRMNVALTRARYTVIIVGSMSLLQQDPTWKSLIKYVQENNFVYKAGEV 1353
Query: 759 YA 760
Y+
Sbjct: 1354 YS 1355
>gi|354502821|ref|XP_003513480.1| PREDICTED: probable helicase senataxin [Cricetulus griseus]
Length = 2635
Score = 197 bits (502), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 148/460 (32%), Positives = 219/460 (47%), Gaps = 84/460 (18%)
Query: 375 RVLVCAPSNSALDEIVLRLL---------------NTG----IRDENIRSYTPKIVRIGL 415
RVLVCAPSN+A+DE++ +++ N G +R +S ++++ L
Sbjct: 1968 RVLVCAPSNAAVDELMKKIILEFKEKCKDKKNPLGNCGDINLVRLGPEKSINTEVLKFSL 2027
Query: 416 KAH--HSVNSVAIDHLVEQKRDDSAADKQKHGATR------------------------K 449
+ H + H+ E R D Q +R K
Sbjct: 2028 DSQVSHRMKKDLPSHIQEMLRKKEFLDGQLDELSRQRALCRGGREMQRLELDGCIVKVSK 2087
Query: 450 DRDSIRS--------------AILNEAVIVCSTLSFSGSALLSKLNHG-----FDVVIID 490
+R + S I+ E+ ++C TLS SG LL G F VI+D
Sbjct: 2088 ERQELASKIKEVQGRPQKTQNTIILESHVICCTLSTSGGLLLESAFRGQGGVPFSCVIVD 2147
Query: 491 EAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQR------ 544
EA Q+ E TL PL C ++ LVGDP QLP TVIS A+ GY S+ R +
Sbjct: 2148 EAGQSCEVETLSPLIHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMARFCKLLEENV 2207
Query: 545 -----AGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFS 599
P+ L QYRMHP++ FPS Y++ L+ E T R E+ F P+
Sbjct: 2208 EQNMIGRLPILQLTIQYRMHPDICLFPSNYVYNKNLKTNRMTE--TIRCSSEWP-FQPYL 2264
Query: 600 FFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQF 659
FD+ +G E + + S+IN+ E+ V+ + KLI + SS + II+ Y+ Q
Sbjct: 2265 VFDVGDGSERR--DNDSYINVQEIKLVMEII-KLIKDKRKDISSRNIGIITHYKAQKTMI 2321
Query: 660 QERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASD-KKSIGFLADYRRMNVGIT 718
Q+ ++ F + VD TVD QGR+KD I +CVRAS + SIGFLA +R+NV IT
Sbjct: 2322 QKDLEKEFDKKGPAEVD--TVDAFQGRQKDCIIVTCVRASAVQGSIGFLASLQRLNVTIT 2379
Query: 719 RAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRVSKP 758
RAK S+ ++G TL E++HW L++ A+K+ + + P
Sbjct: 2380 RAKYSLFILGHLRTLMENQHWYELIQDAQKRGAIIKTCDP 2419
Score = 40.4 bits (93), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 63/136 (46%), Gaps = 32/136 (23%)
Query: 183 IHSLITSSVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPF----KDLILSASEKSSGS 238
+ ++ SS+ +++L ++ + S +R LA + P KDL+ + SE+
Sbjct: 1841 MKCIVISSLVTTQRKLKAMSLLS----SRNQLARAVLNPNPMDFCTKDLLTTTSER---- 1892
Query: 239 QDQSWKIPGLLHEYIKENHNASQLEAI--------HEGLLRKAFVLIQGPPGTGKTQTIL 290
+ Y+K+ N Q +AI H + K LI GPPGTGK++TI+
Sbjct: 1893 ----------IITYLKD-FNEDQKKAIETAYAMVKHSPSVAK-ICLIHGPPGTGKSKTIV 1940
Query: 291 GLLSAILHATPARVHS 306
GLL +L + HS
Sbjct: 1941 GLLYRLLTENQRKGHS 1956
>gi|383416785|gb|AFH31606.1| putative helicase senataxin [Macaca mulatta]
Length = 2680
Score = 197 bits (502), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 125/348 (35%), Positives = 186/348 (53%), Gaps = 31/348 (8%)
Query: 426 IDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHG-- 483
I + +++++ ++ K+ G +K +S I+ E+ ++C TLS SG LL G
Sbjct: 2119 ISKVSKERQELASKIKEVQGRPQK----TQSIIILESHVICCTLSTSGGLLLESAFRGQG 2174
Query: 484 ---FDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFK 540
F VI+DEA Q+ E TL PL C ++ LVGDP QLP TVIS A+ GY S+
Sbjct: 2175 GVPFSCVIVDEAGQSCEIETLTPLIHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMA 2234
Query: 541 RLQR-----------AGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDY-TTRD 588
R R + P+ L QYRMHP++ FPS Y+ L+ E + D
Sbjct: 2235 RFCRLLEENVEHNMISRLPILQLTVQYRMHPDICLFPSNYIYNRNLKTNRQTETIRCSSD 2294
Query: 589 WHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAI 648
W F P+ FD+ +G E + + S+IN+ E+ V+ + KLI + S + I
Sbjct: 2295 WP----FQPYLVFDVGDGSERR--DNDSYINVQEIKLVMEII-KLIKDKRKDVSFRNIGI 2347
Query: 649 ISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRA-SDKKSIGFL 707
I+ Y+ Q Q+ + F + VD TVD QGR+KD I +CVRA S + SIGFL
Sbjct: 2348 ITHYKAQKTMIQKDLDKEFDRKGPAEVD--TVDAFQGRQKDCVIVTCVRANSGQGSIGFL 2405
Query: 708 ADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRV 755
A +R+NV ITRAK S+ ++G TL E++HWN L++ A+K+ + +
Sbjct: 2406 ASLQRLNVTITRAKYSLFILGHLRTLMENQHWNQLIQDAQKRGAIIKT 2453
>gi|380810832|gb|AFE77291.1| putative helicase senataxin [Macaca mulatta]
Length = 2680
Score = 197 bits (502), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 125/348 (35%), Positives = 186/348 (53%), Gaps = 31/348 (8%)
Query: 426 IDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHG-- 483
I + +++++ ++ K+ G +K +S I+ E+ ++C TLS SG LL G
Sbjct: 2119 ISKVSKERQELASKIKEVQGRPQK----TQSIIILESHVICCTLSTSGGLLLESAFRGQG 2174
Query: 484 ---FDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFK 540
F VI+DEA Q+ E TL PL C ++ LVGDP QLP TVIS A+ GY S+
Sbjct: 2175 GVPFSCVIVDEAGQSCEIETLTPLIHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMA 2234
Query: 541 RLQR-----------AGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDY-TTRD 588
R R + P+ L QYRMHP++ FPS Y+ L+ E + D
Sbjct: 2235 RFCRLLEENVEHNMISRLPILQLTVQYRMHPDICLFPSNYIYNRNLKTNRQTETIRCSSD 2294
Query: 589 WHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAI 648
W F P+ FD+ +G E + + S+IN+ E+ V+ + KLI + S + I
Sbjct: 2295 WP----FQPYLVFDVGDGSERR--DNDSYINVQEIKLVMEII-KLIKDKRKDVSFRNIGI 2347
Query: 649 ISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRA-SDKKSIGFL 707
I+ Y+ Q Q+ + F + VD TVD QGR+KD I +CVRA S + SIGFL
Sbjct: 2348 ITHYKAQKTMIQKDLDKEFDRKGPAEVD--TVDAFQGRQKDCVIVTCVRANSGQGSIGFL 2405
Query: 708 ADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRV 755
A +R+NV ITRAK S+ ++G TL E++HWN L++ A+K+ + +
Sbjct: 2406 ASLQRLNVTITRAKYSLFILGHLRTLMENQHWNQLIQDAQKRGAIIKT 2453
>gi|452824849|gb|EME31849.1| tRNA-splicing endonuclease positive effector-related protein
[Galdieria sulphuraria]
Length = 895
Score = 197 bits (502), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 121/307 (39%), Positives = 169/307 (55%), Gaps = 28/307 (9%)
Query: 469 LSFSGSALLSKLNHG------FDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPA 522
S SG++ +S + FD VIIDEAAQA EPA L+P K+ L+GDP QLPA
Sbjct: 556 FSLSGNSAISHTRNQMDKYFWFDTVIIDEAAQATEPACLIPFLFQIKRCVLIGDPQQLPA 615
Query: 523 TVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVE 582
TV S YG SL +R R G PV ML TQYRMHP + FP++ FY L++ + V
Sbjct: 616 TVFSCGDLGTAYGQSLLERFCRVGRPVIMLDTQYRMHPAISLFPNQYFYQGLLKNDTSV- 674
Query: 583 DYTTRDWHEYRC--------FGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLI 634
D + C GP++ DI +GKE + + SGS+ N E D + ++
Sbjct: 675 ---CNDNRSHICHSDFLKPLLGPYAVIDISDGKEFRSSSSGSFYNEKEADIIARIYKYFQ 731
Query: 635 SMY-PQLKSSS------QLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGRE 687
Y P+ + + ++ I++PYR Q+ ++ F++ S + V+I +VD QGRE
Sbjct: 732 HKYLPKETNETNTPFKKRVGIVTPYRRQLLSLRQAFEKHHI--SLRGVEIDSVDAFQGRE 789
Query: 688 KDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTL-REDKHWNNLVKSA 746
KD I SCVR S +K IGF+ D RRMNV ITRAK S+L+VG L W LV++A
Sbjct: 790 KDWIILSCVRCSFEKGIGFVRDIRRMNVAITRAKYSLLIVGNMKALSHHSTDWFALVENA 849
Query: 747 EKQDCLF 753
+++ L
Sbjct: 850 KQRGVLL 856
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 100/224 (44%), Gaps = 32/224 (14%)
Query: 203 ICSLSTIAREYLALRSVGSLPFKDLILSASEKSS---------GSQDQSWKIPGLLHEYI 253
I S+ T +RE+LA+ ++ K IL S+ G + +I ++ +
Sbjct: 228 IGSVVTASREFLAVENLSKYALKLEILKPSQCEGLRFSIGCLKGPNPKFQRIMAVVDKVS 287
Query: 254 KE-NHNASQLEAIHEGLLRK-AFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLR 311
NASQ EA+ + F LIQGPPGTGKT T+L +L+ +LH
Sbjct: 288 SSWQLNASQYEAVASCVTSSTGFHLIQGPPGTGKTNTLLAILN-VLHVY----------- 335
Query: 312 EIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNSSRR 371
G +L +W + + + D++ G + L + SR
Sbjct: 336 ----GYQLYYDSLIENWYQRNGHQTYSLDTDSVSSSTLLSGLLGSLDQTLG----SLSRS 387
Query: 372 YRV-RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIG 414
R RV++CAPSN+A+DE + +LL D + Y P+++R+G
Sbjct: 388 IRKPRVMICAPSNAAVDEAMSKLLQHSFVDVDGNQYQPEMIRMG 431
>gi|358414658|ref|XP_001787696.2| PREDICTED: probable helicase senataxin [Bos taurus]
Length = 2592
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 213/774 (27%), Positives = 340/774 (43%), Gaps = 124/774 (16%)
Query: 52 REVKDTYKDVDDYLATFEPLL----FEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGFH 107
R V ++D DY F PL+ FE V + I ++E+ + LR G+ +
Sbjct: 1651 RRVPIRFQDCGDYFNVFFPLMVLNTFETVAQEWISSPNKEKFHQLHLRKFP--GDYKKYW 1708
Query: 108 LPSVTYEADEV-ESISP--NDLLLLSKEEFKEGSTFPTTYAFALVEHCQANLLRLRMYLA 164
V E E+ + + P NDL+ L E E L + C+ + +
Sbjct: 1709 EFVVYLEECELAKQLHPRENDLVFLVPERLNEEKK--DLEWSHLEDACEYYCGYVHKFRR 1766
Query: 165 GEVIHINK----DAVKSQRLLNIH------SLITSSVSAVEKRLFSLKICSLSTIAREYL 214
V+H K ++++Q L ++ + SS+ +++L ++ + S R L
Sbjct: 1767 TSVMHNGKFECSVSIQTQDNLPVNLNELVKCFVISSLVTTQRKLKAMSLLS----GRNQL 1822
Query: 215 ALRSVGSLPF----KDLILSASEKSSGSQDQSWKIPGLLHEYIKENHNASQLEAIHEGLL 270
A + P KDL + SE+ + Y+K+ N Q +AI
Sbjct: 1823 ARAILNPNPMDFCTKDLPTATSER--------------IVAYLKD-FNEDQKKAIETACA 1867
Query: 271 R-------KAFVLIQGPPGTGKTQTILGLLSAILHATPARVHS-KGGLREIKRGPEL--- 319
LI GPPGTGK++TI+G+L +L R +S + +IK+ L
Sbjct: 1868 MVKHSPSVAKICLIHGPPGTGKSKTIVGILYRLLTENQRRGYSDENSNAKIKQNRVLVCA 1927
Query: 320 PMHEKYNHWGRASPWLVGANPRDNIMPID--GDDGFF-----PTTGNELKPEVVNSSRRY 372
P + + + +D P+ GD + NE+ ++S +
Sbjct: 1928 PSNAAVDELMKKIILEFKEKCKDKKNPMGNCGDINLVRLGPEKSINNEVLKFSLDSQVNH 1987
Query: 373 RVRVLVCAPS------------NSALDEIV-LRLLNTGIRDENIRSYTPKIVRIGLKAHH 419
R++ + PS + LDE+ R L G R+ + KI R+
Sbjct: 1988 RMKKDL--PSHVQEMHKRKEFLDHQLDELSRQRALCRGGRESQRQELDGKIARVS----- 2040
Query: 420 SVNSVAIDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSK 479
+++++ ++ K+ G +K + I IL +I C TLS SG LL
Sbjct: 2041 -----------KERQELASKIKEVQGRPQKTQSII---ILESHIICC-TLSTSGGLLLEA 2085
Query: 480 LNHG-----FDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGY 534
G F VI+DEA Q+ E TL PL C ++ LVGDP QLP TVIS A+ GY
Sbjct: 2086 AFRGQGGVPFSCVIVDEAGQSCEVETLTPLIHRCNKLVLVGDPKQLPPTVISVKAQDYGY 2145
Query: 535 GTSLFKRLQR-----------AGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVE- 582
S+ R + PV L QYRMHP++ FPS YD L E
Sbjct: 2146 DQSMMARFHKLLEESVEHNMIGRLPVLQLTIQYRMHPDICLFPSSYIYDGILRTNRGTET 2205
Query: 583 DYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKS 642
+ DW F P+ FD+ +G E + + S++N+ E+ V+ L KLI + +
Sbjct: 2206 SRCSSDWP----FQPYLVFDVGDGLERR--DNDSYVNVQEIKLVMELI-KLIKDKRRDVT 2258
Query: 643 SSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRA-SDK 701
+ II+ Y+ Q Q+ + F + + ++ TVD QGR+KD I +CVRA + +
Sbjct: 2259 FRNIGIITHYKAQKTMIQKDLDKEF--DRKGAAEVDTVDAFQGRQKDCVIVTCVRANATQ 2316
Query: 702 KSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRV 755
SIGFLA +R+NV ITRAK S+ ++G TL E++HW +L++ A+K+ + +
Sbjct: 2317 GSIGFLASLQRLNVTITRAKYSLFILGHLRTLVENRHWYHLIQDAQKRGAIIKT 2370
>gi|115491919|ref|XP_001210587.1| ATP-dependent helicase NAM7 [Aspergillus terreus NIH2624]
gi|114197447|gb|EAU39147.1| ATP-dependent helicase NAM7 [Aspergillus terreus NIH2624]
Length = 1072
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 147/451 (32%), Positives = 219/451 (48%), Gaps = 58/451 (12%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNS-VAIDHLVEQK 433
+VLVCAPSN A+D++ R+ TG+ K VR+ K+ V S V L EQ
Sbjct: 464 QVLVCAPSNVAVDQLCERIHRTGL----------KTVRVTAKSREDVESPVGFLSLHEQV 513
Query: 434 R-DDSAADKQKHGATRKD------------RDSIRSA---ILNEAVIVCSTLSFSGSALL 477
R +DS + K + + + RSA ILN A ++C T +G L
Sbjct: 514 RLNDSNIELMKLNQLKSELGELSSQDEKRLKQLTRSAEREILNNADVICCTCVGAGDPRL 573
Query: 478 SKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTS 537
+KL F V+IDE+ Q+ EP ++PL GCKQV LVGD QL +++ A G S
Sbjct: 574 AKLK--FRTVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQS 631
Query: 538 LFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRD----WHEYR 593
LF+RL G L QYRMHP + FPS FY+ +L++G + RD W
Sbjct: 632 LFERLVILGCSPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGISSIERLRRDVDFPWPIMD 691
Query: 594 CFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQ-LAIISPY 652
P F+ + G E A S++N E V K+++ + + Q + II+PY
Sbjct: 692 --NPMMFWS-NLGNEEISASGTSYLNRTEATNV----EKIVTRFFKAGVQPQDIGIITPY 744
Query: 653 RHQVKQFQERFKE--TFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADY 710
Q + TF E K +++ +VD QGREKD I SCVR++D + IGFL+D
Sbjct: 745 EGQRSYIVSSMQANGTFKKEHYKEIEVASVDAFQGREKDFIILSCVRSNDHQGIGFLSDP 804
Query: 711 RRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDC------------LFRVSKP 758
RR+NV +TRAK + ++G L + WN L++ +++ C L + S+P
Sbjct: 805 RRLNVALTRAKYGLAILGNPKVLSKHPLWNCLLQHFKERHCLVEGPLSNLQESLIQFSRP 864
Query: 759 YASFFSDENLE---SMRKNATTDNVQGADGH 786
++ + + + N T+ + G GH
Sbjct: 865 KQAYRGPQRFQMAYNHASNVTSGMMNGRSGH 895
>gi|77415498|gb|AAI06018.1| SETX protein, partial [Homo sapiens]
Length = 867
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 122/319 (38%), Positives = 172/319 (53%), Gaps = 27/319 (8%)
Query: 455 RSAILNEAVIVCSTLSFSGSALLSKLNHG-----FDVVIIDEAAQAVEPATLVPLATGCK 509
+S I+ E+ I+C TLS SG LL G F VI+DEA Q+ E TL PL C
Sbjct: 331 QSIIILESHIICCTLSTSGGLLLESAFRGQGGVPFSCVIVDEAGQSCEIETLTPLIHRCN 390
Query: 510 QVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQR-----------AGYPVKMLKTQYRM 558
++ LVGDP QLP TVIS A+ GY S+ R R + P+ L QYRM
Sbjct: 391 KLILVGDPKQLPPTVISMKAQEYGYDQSMMARFCRLLEENVEHNMISRLPILQLTVQYRM 450
Query: 559 HPEVRSFPSREFYDEALEDGSDVEDY-TTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSW 617
HP++ FPS Y+ L+ E + DW F P+ FD+ +G E + + S+
Sbjct: 451 HPDICLFPSNYVYNRNLKTNRQTEAIRCSSDWP----FQPYLVFDVGDGSERR--DNDSY 504
Query: 618 INIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDI 677
IN+ E+ V+ + KLI + S + II+ Y+ Q Q+ + F + VD
Sbjct: 505 INVQEIKLVMEII-KLIKDKRKDVSFRNIGIITHYKAQKTMIQKDLDKEFDRKGPAEVD- 562
Query: 678 TTVDGCQGREKDVAIFSCVRA-SDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLRED 736
TVD QGR+KD I +CVRA S + SIGFLA +R+NV ITRAK S+ ++G TL E+
Sbjct: 563 -TVDAFQGRQKDCVIVTCVRANSIQGSIGFLASLQRLNVTITRAKYSLFILGHLRTLMEN 621
Query: 737 KHWNNLVKSAEKQDCLFRV 755
+HWN L++ A+K+ + +
Sbjct: 622 QHWNQLIQDAQKRGAIIKT 640
>gi|187951665|gb|AAI37351.1| Senataxin [Homo sapiens]
Length = 2677
Score = 197 bits (500), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 126/348 (36%), Positives = 186/348 (53%), Gaps = 31/348 (8%)
Query: 426 IDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHG-- 483
I + +++++ ++ K+ G +K +S I+ E+ I+C TLS SG LL G
Sbjct: 2116 ISKVSKERQELASKIKEVQGRPQK----TQSIIILESHIICCTLSTSGGLLLESAFRGQG 2171
Query: 484 ---FDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFK 540
F VI+DEA Q+ E TL PL C ++ LVGDP QLP TVIS A+ GY S+
Sbjct: 2172 GVPFSCVIVDEAGQSCEIETLTPLIHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMA 2231
Query: 541 RLQR-----------AGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDY-TTRD 588
R R + P+ L QYRMHP++ FPS Y+ L+ E + D
Sbjct: 2232 RFCRLLEENVEHNMISRLPILQLTVQYRMHPDICLFPSNYVYNRNLKTNRQTEAIRCSSD 2291
Query: 589 WHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAI 648
W F P+ FD+ +G E + + S+IN+ E+ V+ + KLI + S + I
Sbjct: 2292 WP----FQPYLVFDVGDGSERR--DNDSYINVQEIKLVMEII-KLIKDKRKDVSFRNIGI 2344
Query: 649 ISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRA-SDKKSIGFL 707
I+ Y+ Q Q+ + F + VD TVD QGR+KD I +CVRA S + SIGFL
Sbjct: 2345 ITHYKAQKTMIQKDLDKEFDRKGPAEVD--TVDAFQGRQKDCVIVTCVRANSIQGSIGFL 2402
Query: 708 ADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRV 755
A +R+NV ITRAK S+ ++G TL E++HWN L++ A+K+ + +
Sbjct: 2403 ASLQRLNVTITRAKYSLFILGHLRTLMENQHWNQLIQDAQKRGAIIKT 2450
>gi|7022724|dbj|BAA91701.1| unnamed protein product [Homo sapiens]
Length = 828
Score = 197 bits (500), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 122/319 (38%), Positives = 172/319 (53%), Gaps = 27/319 (8%)
Query: 455 RSAILNEAVIVCSTLSFSGSALLSKLNHG-----FDVVIIDEAAQAVEPATLVPLATGCK 509
+S I+ E+ I+C TLS SG LL G F VI+DEA Q+ E TL PL C
Sbjct: 292 QSIIILESHIICCTLSTSGGLLLESAFRGQGGVPFSCVIVDEAGQSCEIETLTPLIHRCN 351
Query: 510 QVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQR-----------AGYPVKMLKTQYRM 558
++ LVGDP QLP TVIS A+ GY S+ R R + P+ L QYRM
Sbjct: 352 KLILVGDPKQLPPTVISMKAQEYGYDQSMMARFCRLLEENVEHNMISRLPILQLTVQYRM 411
Query: 559 HPEVRSFPSREFYDEALEDGSDVEDY-TTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSW 617
HP++ FPS Y+ L+ E + DW F P+ FD+ +G E + + S+
Sbjct: 412 HPDICLFPSNYVYNRNLKTNRQTEAIRCSSDWP----FQPYLVFDVGDGSERR--DNDSY 465
Query: 618 INIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDI 677
IN+ E+ V+ + KLI + S + II+ Y+ Q Q+ + F + VD
Sbjct: 466 INVQEIKLVMEII-KLIKDKRKDVSFRNIGIITHYKAQKTMIQKDLDKEFDRKGPAEVD- 523
Query: 678 TTVDGCQGREKDVAIFSCVRA-SDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLRED 736
TVD QGR+KD I +CVRA S + SIGFLA +R+NV ITRAK S+ ++G TL E+
Sbjct: 524 -TVDAFQGRQKDCVIVTCVRANSIQGSIGFLASLQRLNVTITRAKYSLFILGHLRTLMEN 582
Query: 737 KHWNNLVKSAEKQDCLFRV 755
+HWN L++ A+K+ + +
Sbjct: 583 QHWNQLIQDAQKRGAIIKT 601
>gi|34327966|dbj|BAA31600.2| KIAA0625 protein [Homo sapiens]
Length = 2663
Score = 197 bits (500), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 126/348 (36%), Positives = 186/348 (53%), Gaps = 31/348 (8%)
Query: 426 IDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHG-- 483
I + +++++ ++ K+ G +K +S I+ E+ I+C TLS SG LL G
Sbjct: 2102 ISKVSKERQELASKIKEVQGRPQK----TQSIIILESHIICCTLSTSGGLLLESAFRGQG 2157
Query: 484 ---FDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFK 540
F VI+DEA Q+ E TL PL C ++ LVGDP QLP TVIS A+ GY S+
Sbjct: 2158 GVPFSCVIVDEAGQSCEIETLTPLIHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMA 2217
Query: 541 RLQR-----------AGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDY-TTRD 588
R R + P+ L QYRMHP++ FPS Y+ L+ E + D
Sbjct: 2218 RFCRLLEENVEHNMISRLPILQLTVQYRMHPDICLFPSNYVYNRNLKTNRQTEAIRCSSD 2277
Query: 589 WHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAI 648
W F P+ FD+ +G E + + S+IN+ E+ V+ + KLI + S + I
Sbjct: 2278 WP----FQPYLVFDVGDGSERR--DNDSYINVQEIKLVMEII-KLIKDKRKDVSFRNIGI 2330
Query: 649 ISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRA-SDKKSIGFL 707
I+ Y+ Q Q+ + F + VD TVD QGR+KD I +CVRA S + SIGFL
Sbjct: 2331 ITHYKAQKTMIQKDLDKEFDRKGPAEVD--TVDAFQGRQKDCVIVTCVRANSIQGSIGFL 2388
Query: 708 ADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRV 755
A +R+NV ITRAK S+ ++G TL E++HWN L++ A+K+ + +
Sbjct: 2389 ASLQRLNVTITRAKYSLFILGHLRTLMENQHWNQLIQDAQKRGAIIKT 2436
>gi|113722133|ref|NP_055861.3| probable helicase senataxin [Homo sapiens]
gi|296453021|sp|Q7Z333.4|SETX_HUMAN RecName: Full=Probable helicase senataxin; AltName: Full=Amyotrophic
lateral sclerosis 4 protein; AltName: Full=SEN1 homolog
Length = 2677
Score = 197 bits (500), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 126/348 (36%), Positives = 186/348 (53%), Gaps = 31/348 (8%)
Query: 426 IDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHG-- 483
I + +++++ ++ K+ G +K +S I+ E+ I+C TLS SG LL G
Sbjct: 2116 ISKVSKERQELASKIKEVQGRPQK----TQSIIILESHIICCTLSTSGGLLLESAFRGQG 2171
Query: 484 ---FDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFK 540
F VI+DEA Q+ E TL PL C ++ LVGDP QLP TVIS A+ GY S+
Sbjct: 2172 GVPFSCVIVDEAGQSCEIETLTPLIHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMA 2231
Query: 541 RLQR-----------AGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDY-TTRD 588
R R + P+ L QYRMHP++ FPS Y+ L+ E + D
Sbjct: 2232 RFCRLLEENVEHNMISRLPILQLTVQYRMHPDICLFPSNYVYNRNLKTNRQTEAIRCSSD 2291
Query: 589 WHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAI 648
W F P+ FD+ +G E + + S+IN+ E+ V+ + KLI + S + I
Sbjct: 2292 WP----FQPYLVFDVGDGSERR--DNDSYINVQEIKLVMEII-KLIKDKRKDVSFRNIGI 2344
Query: 649 ISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRA-SDKKSIGFL 707
I+ Y+ Q Q+ + F + VD TVD QGR+KD I +CVRA S + SIGFL
Sbjct: 2345 ITHYKAQKTMIQKDLDKEFDRKGPAEVD--TVDAFQGRQKDCVIVTCVRANSIQGSIGFL 2402
Query: 708 ADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRV 755
A +R+NV ITRAK S+ ++G TL E++HWN L++ A+K+ + +
Sbjct: 2403 ASLQRLNVTITRAKYSLFILGHLRTLMENQHWNQLIQDAQKRGAIIKT 2450
>gi|38195410|gb|AAR13367.1| ataxia/oculomotor apraxia protein 2 [Homo sapiens]
Length = 2677
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 126/348 (36%), Positives = 186/348 (53%), Gaps = 31/348 (8%)
Query: 426 IDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHG-- 483
I + +++++ ++ K+ G +K +S I+ E+ I+C TLS SG LL G
Sbjct: 2116 ISKVSKERQELASKIKEVQGRPQK----TQSIIILESHIICCTLSTSGGLLLESAFRGQG 2171
Query: 484 ---FDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFK 540
F VI+DEA Q+ E TL PL C ++ LVGDP QLP TVIS A+ GY S+
Sbjct: 2172 GVPFSCVIVDEAGQSCEIETLTPLIHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMA 2231
Query: 541 RLQR-----------AGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDY-TTRD 588
R R + P+ L QYRMHP++ FPS Y+ L+ E + D
Sbjct: 2232 RFCRLLEENVEHNMISRLPILQLTVQYRMHPDICLFPSNYVYNRNLKTNRQTEAIRCSSD 2291
Query: 589 WHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAI 648
W F P+ FD+ +G E + + S+IN+ E+ V+ + KLI + S + I
Sbjct: 2292 WP----FQPYLVFDVGDGSERR--DNDSYINVQEIKLVMEII-KLIKDKRKDVSFRNIGI 2344
Query: 649 ISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRA-SDKKSIGFL 707
I+ Y+ Q Q+ + F + VD TVD QGR+KD I +CVRA S + SIGFL
Sbjct: 2345 ITHYKAQKTMIQKDLDKEFDRKGPAEVD--TVDAFQGRQKDCVIVTCVRANSIQGSIGFL 2402
Query: 708 ADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRV 755
A +R+NV ITRAK S+ ++G TL E++HWN L++ A+K+ + +
Sbjct: 2403 ASLQRLNVTITRAKYSLFILGHLRTLMENQHWNQLIQDAQKRGAIIKT 2450
>gi|31874607|emb|CAD98045.1| hypothetical protein [Homo sapiens]
Length = 2677
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 126/348 (36%), Positives = 186/348 (53%), Gaps = 31/348 (8%)
Query: 426 IDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHG-- 483
I + +++++ ++ K+ G +K +S I+ E+ I+C TLS SG LL G
Sbjct: 2116 ISKVSKERQELASKIKEVQGRPQK----TQSIIILESHIICCTLSTSGGLLLESAFRGQG 2171
Query: 484 ---FDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFK 540
F VI+DEA Q+ E TL PL C ++ LVGDP QLP TVIS A+ GY S+
Sbjct: 2172 GVPFSCVIVDEAGQSCEIETLTPLIHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMA 2231
Query: 541 RLQR-----------AGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDY-TTRD 588
R R + P+ L QYRMHP++ FPS Y+ L+ E + D
Sbjct: 2232 RFCRLLEENVEHNMISRLPILQLTVQYRMHPDICLFPSNYVYNRNLKTNRQTEAIRCSSD 2291
Query: 589 WHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAI 648
W F P+ FD+ +G E + + S+IN+ E+ V+ + KLI + S + I
Sbjct: 2292 WP----FQPYLVFDVGDGSERR--DNDSYINVQEIKLVMEII-KLIKDKRKDVSFRNIGI 2344
Query: 649 ISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRA-SDKKSIGFL 707
I+ Y+ Q Q+ + F + VD TVD QGR+KD I +CVRA S + SIGFL
Sbjct: 2345 ITHYKAQKTMIQKDLDKEFDRKGPAEVD--TVDAFQGRQKDCVIVTCVRANSIQGSIGFL 2402
Query: 708 ADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRV 755
A +R+NV ITRAK S+ ++G TL E++HWN L++ A+K+ + +
Sbjct: 2403 ASLQRLNVTITRAKYSLFILGHLRTLMENQHWNQLIQDAQKRGAIIKT 2450
>gi|50603852|gb|AAH78166.1| SETX protein, partial [Homo sapiens]
Length = 917
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 122/319 (38%), Positives = 172/319 (53%), Gaps = 27/319 (8%)
Query: 455 RSAILNEAVIVCSTLSFSGSALLSKLNHG-----FDVVIIDEAAQAVEPATLVPLATGCK 509
+S I+ E+ I+C TLS SG LL G F VI+DEA Q+ E TL PL C
Sbjct: 381 QSIIILESHIICCTLSTSGGLLLESAFRGQGGVPFSCVIVDEAGQSCEIETLTPLIHRCN 440
Query: 510 QVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQR-----------AGYPVKMLKTQYRM 558
++ LVGDP QLP TVIS A+ GY S+ R R + P+ L QYRM
Sbjct: 441 KLILVGDPKQLPPTVISMKAQEYGYDQSMMARFCRLLEENVEHNMISRLPILQLTVQYRM 500
Query: 559 HPEVRSFPSREFYDEALEDGSDVEDY-TTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSW 617
HP++ FPS Y+ L+ E + DW F P+ FD+ +G E + + S+
Sbjct: 501 HPDICLFPSNYVYNRNLKTNRQTEAIRCSSDWP----FQPYLVFDVGDGSERR--DNDSY 554
Query: 618 INIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDI 677
IN+ E+ V+ + KLI + S + II+ Y+ Q Q+ + F + VD
Sbjct: 555 INVQEIKLVMEII-KLIKDKRKDVSFRNIGIITHYKAQKTMIQKDLDKEFDRKGPAEVD- 612
Query: 678 TTVDGCQGREKDVAIFSCVRA-SDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLRED 736
TVD QGR+KD I +CVRA S + SIGFLA +R+NV ITRAK S+ ++G TL E+
Sbjct: 613 -TVDAFQGRQKDCVIVTCVRANSIQGSIGFLASLQRLNVTITRAKYSLFILGHLRTLMEN 671
Query: 737 KHWNNLVKSAEKQDCLFRV 755
+HWN L++ A+K+ + +
Sbjct: 672 QHWNQLIQDAQKRGAIIKT 690
>gi|211827336|gb|AAH32600.2| SETX protein [Homo sapiens]
Length = 930
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 122/319 (38%), Positives = 172/319 (53%), Gaps = 27/319 (8%)
Query: 455 RSAILNEAVIVCSTLSFSGSALLSKLNHG-----FDVVIIDEAAQAVEPATLVPLATGCK 509
+S I+ E+ I+C TLS SG LL G F VI+DEA Q+ E TL PL C
Sbjct: 394 QSIIILESHIICCTLSTSGGLLLESAFRGQGGVPFSCVIVDEAGQSCEIETLTPLIHRCN 453
Query: 510 QVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQR-----------AGYPVKMLKTQYRM 558
++ LVGDP QLP TVIS A+ GY S+ R R + P+ L QYRM
Sbjct: 454 KLILVGDPKQLPPTVISMKAQEYGYDQSMMARFCRLLEENVEHNMISRLPILQLTVQYRM 513
Query: 559 HPEVRSFPSREFYDEALEDGSDVEDY-TTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSW 617
HP++ FPS Y+ L+ E + DW F P+ FD+ +G E + + S+
Sbjct: 514 HPDICLFPSNYVYNRNLKTNRQTEAIRCSSDWP----FQPYLVFDVGDGSERR--DNDSY 567
Query: 618 INIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDI 677
IN+ E+ V+ + KLI + S + II+ Y+ Q Q+ + F + VD
Sbjct: 568 INVQEIKLVMEII-KLIKDKRKDVSFRNIGIITHYKAQKTMIQKDLDKEFDRKGPAEVD- 625
Query: 678 TTVDGCQGREKDVAIFSCVRA-SDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLRED 736
TVD QGR+KD I +CVRA S + SIGFLA +R+NV ITRAK S+ ++G TL E+
Sbjct: 626 -TVDAFQGRQKDCVIVTCVRANSIQGSIGFLASLQRLNVTITRAKYSLFILGHLRTLMEN 684
Query: 737 KHWNNLVKSAEKQDCLFRV 755
+HWN L++ A+K+ + +
Sbjct: 685 QHWNQLIQDAQKRGAIIKT 703
>gi|402896228|ref|XP_003911208.1| PREDICTED: probable helicase senataxin [Papio anubis]
Length = 2679
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 125/348 (35%), Positives = 186/348 (53%), Gaps = 31/348 (8%)
Query: 426 IDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHG-- 483
I + +++++ ++ K+ G +K +S I+ E+ ++C TLS SG LL G
Sbjct: 2119 ISKVSKERQELASKIKEVQGRPQK----TQSIIILESHVICCTLSTSGGLLLESAFRGQG 2174
Query: 484 ---FDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFK 540
F VI+DEA Q+ E TL PL C ++ LVGDP QLP TVIS A+ GY S+
Sbjct: 2175 GVPFSCVIVDEAGQSCEIETLTPLIHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMA 2234
Query: 541 RLQR-----------AGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDY-TTRD 588
R R + P+ L QYRMHP++ FPS Y+ L+ E + D
Sbjct: 2235 RFCRLLEENVEHNMISRLPILQLTVQYRMHPDICLFPSNYIYNRNLKTNRQTETIRCSSD 2294
Query: 589 WHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAI 648
W F P+ FD+ +G E + + S+IN+ E+ V+ + KLI + S + I
Sbjct: 2295 WP----FQPYLVFDVGDGSERR--DNDSYINVQEIKLVMEII-KLIKDKRKDVSFRNIGI 2347
Query: 649 ISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRA-SDKKSIGFL 707
I+ Y+ Q Q+ + F + VD TVD QGR+KD I +CVRA S + SIGFL
Sbjct: 2348 ITHYKAQKTMIQKDLDKEFDRKGPAEVD--TVDAFQGRQKDCVIVTCVRANSVQGSIGFL 2405
Query: 708 ADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRV 755
A +R+NV ITRAK S+ ++G TL E++HWN L++ A+K+ + +
Sbjct: 2406 ASLQRLNVTITRAKYSLFILGHLRTLMENQHWNQLIQDAQKRGAIIKT 2453
>gi|109504000|ref|XP_001070971.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 1
[Rattus norvegicus]
gi|392353861|ref|XP_003751615.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 2
[Rattus norvegicus]
gi|149036014|gb|EDL90680.1| rCG38820 [Rattus norvegicus]
Length = 1113
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 136/424 (32%), Positives = 222/424 (52%), Gaps = 45/424 (10%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + +R+ VLVCAPSN A+D++ ++ TG+ K+VR
Sbjct: 489 PGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGL----------KVVR 538
Query: 413 IGLKAHHSVNSVA-----------IDHL-----VEQKRDD----SAADKQKHGATRKDRD 452
+ K+ +++S +D + ++Q +D+ S+AD++++ A + R
Sbjct: 539 LCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSADEKRYRALK--RT 596
Query: 453 SIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVF 512
+ R ++N VI C+ + +G L+K+ F ++IDE+ QA EP +VP+ G KQ+
Sbjct: 597 AERELLMNADVICCTCVG-AGDPRLAKMQ--FRSILIDESTQATEPECMVPVVLGAKQLI 653
Query: 513 LVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYD 572
LVGD QL V+ A G SLF+RL G L+ QYRMHP + +FPS FY+
Sbjct: 654 LVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYE 713
Query: 573 EALEDGSDVEDYTTR--DWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
+L++G D + D+ + P FF + +G+E + S++N E V +
Sbjct: 714 GSLQNGVTAADRVKKGFDFQWPQPDKPM-FFYVTQGQEEIASSGTSYLNRTEAANVEKIT 772
Query: 631 HKLISMYPQLKSSSQLAIISPYRHQVKQFQE--RFKETFGVESQKVVDITTVDGCQGREK 688
KL+ + Q+ II+PY Q + +F + + + V+I +VD QGREK
Sbjct: 773 TKLLKAGAK---PDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREK 829
Query: 689 DVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEK 748
D I SCVRA++ + IGFL D RR+NV +TRA+ +++VG L + WN+L+ ++
Sbjct: 830 DFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLSYYKE 889
Query: 749 QDCL 752
Q L
Sbjct: 890 QKAL 893
>gi|168273052|dbj|BAG10365.1| senataxin [synthetic construct]
Length = 2677
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 126/348 (36%), Positives = 186/348 (53%), Gaps = 31/348 (8%)
Query: 426 IDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHG-- 483
I + +++++ ++ K+ G +K +S I+ E+ I+C TLS SG LL G
Sbjct: 2116 ISKVSKERQELASKIKEVQGRPQK----TQSIIILESHIICCTLSTSGGLLLESAFRGQG 2171
Query: 484 ---FDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFK 540
F VI+DEA Q+ E TL PL C ++ LVGDP QLP TVIS A+ GY S+
Sbjct: 2172 GVPFSCVIVDEAGQSCEIETLTPLIHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMA 2231
Query: 541 RLQR-----------AGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDY-TTRD 588
R R + P+ L QYRMHP++ FPS Y+ L+ E + D
Sbjct: 2232 RFCRLLEENVEHNMISRLPILQLTVQYRMHPDICLFPSNYVYNRNLKTNRQTEAIRCSSD 2291
Query: 589 WHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAI 648
W F P+ FD+ +G E + + S+IN+ E+ V+ + KLI + S + I
Sbjct: 2292 WP----FQPYLVFDVGDGSERR--DNDSYINVQEIKLVMEII-KLIKDKRKDVSFRNIGI 2344
Query: 649 ISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRA-SDKKSIGFL 707
I+ Y+ Q Q+ + F + VD TVD QGR+KD I +CVRA S + SIGFL
Sbjct: 2345 ITHYKAQKTMIQKDLDKEFDRKGPAEVD--TVDAFQGRQKDCVIVTCVRANSIQGSIGFL 2402
Query: 708 ADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRV 755
A +R+NV ITRAK S+ ++G TL E++HWN L++ A+K+ + +
Sbjct: 2403 ASLQRLNVTITRAKYSLFILGHLRTLMENQHWNQLIQDAQKRGAIIKT 2450
>gi|12836885|gb|AAK08652.1|AF182947_1 nonsense mRNA reducing factor 1 NORF1 [Mus musculus]
Length = 1113
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 136/424 (32%), Positives = 222/424 (52%), Gaps = 45/424 (10%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + +R+ VLVCAPSN A+D++ ++ TG+ K+VR
Sbjct: 489 PGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGL----------KVVR 538
Query: 413 IGLKAHHSVNSVA-----------IDHL-----VEQKRDD----SAADKQKHGATRKDRD 452
+ K+ +++S +D + ++Q +D+ S+AD++++ A + R
Sbjct: 539 LCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSADEKRYRALK--RT 596
Query: 453 SIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVF 512
+ R ++N VI C+ + +G L+K+ F ++IDE+ QA EP +VP+ G KQ+
Sbjct: 597 AERELLMNADVICCTCVG-AGDPRLAKMQ--FRSILIDESTQATEPECMVPVVLGAKQLI 653
Query: 513 LVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYD 572
LVGD QL V+ A G SLF+RL G L+ QYRMHP + +FPS FY+
Sbjct: 654 LVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYE 713
Query: 573 EALEDGSDVEDYTTR--DWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
+L++G D + D+ + P FF + +G+E + S++N E V +
Sbjct: 714 GSLQNGVTAADRVKKGFDFQWPQPDKPM-FFYVTQGQEEIASSGTSYLNRTEAANVEKIT 772
Query: 631 HKLISMYPQLKSSSQLAIISPYRHQVKQFQE--RFKETFGVESQKVVDITTVDGCQGREK 688
KL+ + Q+ II+PY Q + +F + + + V+I +VD QGREK
Sbjct: 773 TKLLKAGAK---PDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREK 829
Query: 689 DVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEK 748
D I SCVRA++ + IGFL D RR+NV +TRA+ +++VG L + WN+L+ ++
Sbjct: 830 DFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLSYYKE 889
Query: 749 QDCL 752
Q L
Sbjct: 890 QKAL 893
>gi|170784811|ref|NP_109605.2| regulator of nonsense transcripts 1 isoform b [Mus musculus]
gi|11993646|gb|AAG42830.1|AF322655_1 regulator of nonsense transcripts 1 [Mus musculus]
gi|30354613|gb|AAH52149.1| UPF1 regulator of nonsense transcripts homolog (yeast) [Mus
musculus]
gi|148696867|gb|EDL28814.1| UPF1 regulator of nonsense transcripts homolog (yeast), isoform
CRA_b [Mus musculus]
Length = 1113
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 136/424 (32%), Positives = 222/424 (52%), Gaps = 45/424 (10%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + +R+ VLVCAPSN A+D++ ++ TG+ K+VR
Sbjct: 489 PGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGL----------KVVR 538
Query: 413 IGLKAHHSVNSVA-----------IDHL-----VEQKRDD----SAADKQKHGATRKDRD 452
+ K+ +++S +D + ++Q +D+ S+AD++++ A + R
Sbjct: 539 LCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSADEKRYRALK--RT 596
Query: 453 SIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVF 512
+ R ++N VI C+ + +G L+K+ F ++IDE+ QA EP +VP+ G KQ+
Sbjct: 597 AERELLMNADVICCTCVG-AGDPRLAKMQ--FRSILIDESTQATEPECMVPVVLGAKQLI 653
Query: 513 LVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYD 572
LVGD QL V+ A G SLF+RL G L+ QYRMHP + +FPS FY+
Sbjct: 654 LVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYE 713
Query: 573 EALEDGSDVEDYTTR--DWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
+L++G D + D+ + P FF + +G+E + S++N E V +
Sbjct: 714 GSLQNGVTAADRVKKGFDFQWPQPDKPM-FFYVTQGQEEIASSGTSYLNRTEAANVEKIT 772
Query: 631 HKLISMYPQLKSSSQLAIISPYRHQVKQFQE--RFKETFGVESQKVVDITTVDGCQGREK 688
KL+ + Q+ II+PY Q + +F + + + V+I +VD QGREK
Sbjct: 773 TKLLKAGAK---PDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREK 829
Query: 689 DVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEK 748
D I SCVRA++ + IGFL D RR+NV +TRA+ +++VG L + WN+L+ ++
Sbjct: 830 DFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLSYYKE 889
Query: 749 QDCL 752
Q L
Sbjct: 890 QKAL 893
>gi|403289669|ref|XP_003935968.1| PREDICTED: probable helicase senataxin [Saimiri boliviensis
boliviensis]
Length = 2677
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 144/458 (31%), Positives = 217/458 (47%), Gaps = 86/458 (18%)
Query: 375 RVLVCAPSNSALDEIVLRLL---------------NTG----IRDENIRSYTPKIVRIGL 415
RVLVCAPSN+A+DE++ +++ N G +R +S ++++ L
Sbjct: 2003 RVLVCAPSNAAVDELMKKIILEFKEKCKDKKNPLGNCGDINLVRLGPEKSINNEVLKFSL 2062
Query: 416 --KAHHSVNSVAIDHLVEQKRDDSAADKQKHGATR------------------------K 449
+ +H + H+ E R D Q +R K
Sbjct: 2063 DSQVNHRMKKDLPSHVQEMHRRKEFLDYQLDELSRQRALCRGGREIQRQELDEKISEVSK 2122
Query: 450 DRDSIRSAI--------------LNEAVIVCSTLSFSGSALLSKLNHG-----FDVVIID 490
+R + S I + E+ ++C TLS SG LL G F VI+D
Sbjct: 2123 ERQELASKIKEVQGRPQKTQNNIILESHVICCTLSTSGGLLLESAFRGQGGVPFSCVIVD 2182
Query: 491 EAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQR------ 544
EA Q+ E TL PL C ++ LVGDP QLP TVIS A+ GY S+ R +
Sbjct: 2183 EAGQSCEIETLTPLIHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMARFCKLLEENV 2242
Query: 545 -----AGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDY-TTRDWHEYRCFGPF 598
+ P+ L QYRMHP++ FPS Y+ L+ E + DW F P+
Sbjct: 2243 EHNMISRLPILRLTIQYRMHPDICLFPSNYVYNRNLKTNRQTETIRCSSDWP----FQPY 2298
Query: 599 SFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQ 658
FD+ +G E + + S++N+ E+ V+ L KLI + + + II+ Y+ Q
Sbjct: 2299 LVFDVGDGSERR--DNDSYVNVQEIKLVIELI-KLIKDKRKDVTFRNIGIITHYKAQKTM 2355
Query: 659 FQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKK-SIGFLADYRRMNVGI 717
Q+ + F + VD TVD QGR+KD I +CVRA+ + SIGFLA +R+NV I
Sbjct: 2356 IQKDLDKEFDRKGPAEVD--TVDAFQGRQKDCVIVTCVRANTMQGSIGFLASLQRLNVTI 2413
Query: 718 TRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRV 755
TRAK S+ ++G TL E++HWN L++ A+K+ + +
Sbjct: 2414 TRAKYSLFILGHLRTLMENQHWNQLIQDAQKRGAIIKT 2451
>gi|170784813|ref|NP_001116301.1| regulator of nonsense transcripts 1 isoform a [Mus musculus]
gi|150387852|sp|Q9EPU0.2|RENT1_MOUSE RecName: Full=Regulator of nonsense transcripts 1; AltName:
Full=ATP-dependent helicase RENT1; AltName:
Full=Nonsense mRNA reducing factor 1; Short=NORF1;
AltName: Full=Up-frameshift suppressor 1 homolog;
Short=mUpf1
gi|33989570|gb|AAH56442.1| Upf1 protein [Mus musculus]
Length = 1124
Score = 196 bits (499), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 136/424 (32%), Positives = 222/424 (52%), Gaps = 45/424 (10%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + +R+ VLVCAPSN A+D++ ++ TG+ K+VR
Sbjct: 500 PGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGL----------KVVR 549
Query: 413 IGLKAHHSVNSVA-----------IDHL-----VEQKRDD----SAADKQKHGATRKDRD 452
+ K+ +++S +D + ++Q +D+ S+AD++++ A + R
Sbjct: 550 LCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSADEKRYRALK--RT 607
Query: 453 SIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVF 512
+ R ++N VI C+ + +G L+K+ F ++IDE+ QA EP +VP+ G KQ+
Sbjct: 608 AERELLMNADVICCTCVG-AGDPRLAKMQ--FRSILIDESTQATEPECMVPVVLGAKQLI 664
Query: 513 LVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYD 572
LVGD QL V+ A G SLF+RL G L+ QYRMHP + +FPS FY+
Sbjct: 665 LVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYE 724
Query: 573 EALEDGSDVEDYTTR--DWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
+L++G D + D+ + P FF + +G+E + S++N E V +
Sbjct: 725 GSLQNGVTAADRVKKGFDFQWPQPDKPM-FFYVTQGQEEIASSGTSYLNRTEAANVEKIT 783
Query: 631 HKLISMYPQLKSSSQLAIISPYRHQVKQFQE--RFKETFGVESQKVVDITTVDGCQGREK 688
KL+ + Q+ II+PY Q + +F + + + V+I +VD QGREK
Sbjct: 784 TKLLKAGAK---PDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREK 840
Query: 689 DVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEK 748
D I SCVRA++ + IGFL D RR+NV +TRA+ +++VG L + WN+L+ ++
Sbjct: 841 DFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLSYYKE 900
Query: 749 QDCL 752
Q L
Sbjct: 901 QKAL 904
>gi|380800401|gb|AFE72076.1| regulator of nonsense transcripts 1, partial [Macaca mulatta]
gi|380800403|gb|AFE72077.1| regulator of nonsense transcripts 1, partial [Macaca mulatta]
Length = 1064
Score = 196 bits (499), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 136/424 (32%), Positives = 222/424 (52%), Gaps = 45/424 (10%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + +R+ VLVCAPSN A+D++ ++ TG+ K+VR
Sbjct: 440 PGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGL----------KVVR 489
Query: 413 IGLKAHHSVNSVA-----------IDHL-----VEQKRDD----SAADKQKHGATRKDRD 452
+ K+ +++S +D + ++Q +D+ S+AD++++ A + R
Sbjct: 490 LCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSADEKRYRALK--RT 547
Query: 453 SIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVF 512
+ R ++N VI C+ + +G L+K+ F ++IDE+ QA EP +VP+ G KQ+
Sbjct: 548 AERELLMNADVICCTCVG-AGDPRLAKMQ--FRSILIDESTQATEPECMVPVVLGAKQLI 604
Query: 513 LVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYD 572
LVGD QL V+ A G SLF+RL G L+ QYRMHP + +FPS FY+
Sbjct: 605 LVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYE 664
Query: 573 EALEDGSDVEDYTTR--DWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
+L++G D + D+ + P FF + +G+E + S++N E V +
Sbjct: 665 GSLQNGVTAADRVKKGFDFQWPQPDKPM-FFYVTQGQEEIASSGTSYLNRTEAANVEKIT 723
Query: 631 HKLISMYPQLKSSSQLAIISPYRHQVKQFQE--RFKETFGVESQKVVDITTVDGCQGREK 688
KL+ + Q+ II+PY Q + +F + + + V+I +VD QGREK
Sbjct: 724 TKLLKAGAK---PDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREK 780
Query: 689 DVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEK 748
D I SCVRA++ + IGFL D RR+NV +TRA+ +++VG L + WN+L+ ++
Sbjct: 781 DFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKE 840
Query: 749 QDCL 752
Q L
Sbjct: 841 QKVL 844
>gi|148696866|gb|EDL28813.1| UPF1 regulator of nonsense transcripts homolog (yeast), isoform
CRA_a [Mus musculus]
Length = 1131
Score = 196 bits (499), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 136/424 (32%), Positives = 222/424 (52%), Gaps = 45/424 (10%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + +R+ VLVCAPSN A+D++ ++ TG+ K+VR
Sbjct: 507 PGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGL----------KVVR 556
Query: 413 IGLKAHHSVNSVA-----------IDHL-----VEQKRDD----SAADKQKHGATRKDRD 452
+ K+ +++S +D + ++Q +D+ S+AD++++ A + R
Sbjct: 557 LCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSADEKRYRALK--RT 614
Query: 453 SIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVF 512
+ R ++N VI C+ + +G L+K+ F ++IDE+ QA EP +VP+ G KQ+
Sbjct: 615 AERELLMNADVICCTCVG-AGDPRLAKMQ--FRSILIDESTQATEPECMVPVVLGAKQLI 671
Query: 513 LVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYD 572
LVGD QL V+ A G SLF+RL G L+ QYRMHP + +FPS FY+
Sbjct: 672 LVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYE 731
Query: 573 EALEDGSDVEDYTTR--DWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
+L++G D + D+ + P FF + +G+E + S++N E V +
Sbjct: 732 GSLQNGVTAADRVKKGFDFQWPQPDKPM-FFYVTQGQEEIASSGTSYLNRTEAANVEKIT 790
Query: 631 HKLISMYPQLKSSSQLAIISPYRHQVKQFQE--RFKETFGVESQKVVDITTVDGCQGREK 688
KL+ + Q+ II+PY Q + +F + + + V+I +VD QGREK
Sbjct: 791 TKLLKAGAK---PDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREK 847
Query: 689 DVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEK 748
D I SCVRA++ + IGFL D RR+NV +TRA+ +++VG L + WN+L+ ++
Sbjct: 848 DFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLSYYKE 907
Query: 749 QDCL 752
Q L
Sbjct: 908 QKAL 911
>gi|440792662|gb|ELR13871.1| mRNA decay factorlike protein [Acanthamoeba castellanii str. Neff]
Length = 1142
Score = 196 bits (499), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 134/407 (32%), Positives = 209/407 (51%), Gaps = 49/407 (12%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVA--------I 426
+VLVCAPSN A+D++ ++ TG+ K+VR+ K+ +V+S +
Sbjct: 544 QVLVCAPSNVAVDQLTEKIHATGL----------KVVRLCAKSREAVSSPVEFLTLHYLV 593
Query: 427 DHL------------VEQKRDD----SAADKQKHGATRKDRDSIRSAILNEAVIVCSTLS 470
HL ++Q +DD S+AD++K + ++ S+ IL A ++C T
Sbjct: 594 KHLASGSIDKGELAKLQQLKDDQGELSSADEKKFKSLKR---SMEREILQSADVICCTCV 650
Query: 471 FSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAE 530
+G L+ N F V+IDE+ QA EP L+PL G KQV VGD QL ++ A
Sbjct: 651 GAGDPRLT--NFRFRQVLIDESTQATEPECLLPLVLGAKQVIFVGDHCQLGPVIMCKKAA 708
Query: 531 HLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYT--TRD 588
G SLF+RL G L+ QYRMHP + FPS FY+ L++G + D
Sbjct: 709 RAGLSQSLFERLIMLGVRPIRLQVQYRMHPCLSEFPSNTFYEGTLQNGVTAAERNQGALD 768
Query: 589 WHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLK-SSSQLA 647
+ P F++ G+E + S++N +E + K+++ + Q +S+Q+
Sbjct: 769 FPWPVPNKPMFFYNCL-GQEEISSSGTSYLNRNEA----AVCEKIVTHFLQAGVTSAQIG 823
Query: 648 IISPYRHQVKQFQERFKETFGVESQ--KVVDITTVDGCQGREKDVAIFSCVRASDKKSIG 705
+I+PY Q + + SQ K +++ +VD QGREKD I SCVR+++ + IG
Sbjct: 824 VITPYEGQRAYLVNYMQRNGSLRSQLYKEIEVASVDSFQGREKDFIILSCVRSNEHQGIG 883
Query: 706 FLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
FL D RR+NV +TRAK ++V+G A L WNNL+ ++ CL
Sbjct: 884 FLNDPRRLNVALTRAKYGVVVLGNAKVLSRQPLWNNLLVHFKENGCL 930
>gi|402904861|ref|XP_003915257.1| PREDICTED: regulator of nonsense transcripts 1, partial [Papio
anubis]
Length = 1041
Score = 196 bits (499), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 136/424 (32%), Positives = 222/424 (52%), Gaps = 45/424 (10%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + +R+ VLVCAPSN A+D++ ++ TG+ K+VR
Sbjct: 417 PGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGL----------KVVR 466
Query: 413 IGLKAHHSVNSVA-----------IDHL-----VEQKRDD----SAADKQKHGATRKDRD 452
+ K+ +++S +D + ++Q +D+ S+AD++++ A + R
Sbjct: 467 LCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSADEKRYRALK--RT 524
Query: 453 SIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVF 512
+ R ++N VI C+ + +G L+K+ F ++IDE+ QA EP +VP+ G KQ+
Sbjct: 525 AERELLMNADVICCTCVG-AGDPRLAKMQ--FRSILIDESTQATEPECMVPVVLGAKQLI 581
Query: 513 LVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYD 572
LVGD QL V+ A G SLF+RL G L+ QYRMHP + +FPS FY+
Sbjct: 582 LVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYE 641
Query: 573 EALEDGSDVEDYTTR--DWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
+L++G D + D+ + P FF + +G+E + S++N E V +
Sbjct: 642 GSLQNGVTAADRVKKGFDFQWPQPDKPM-FFYVTQGQEEIASSGTSYLNRTEAANVEKIT 700
Query: 631 HKLISMYPQLKSSSQLAIISPYRHQVKQFQE--RFKETFGVESQKVVDITTVDGCQGREK 688
KL+ + Q+ II+PY Q + +F + + + V+I +VD QGREK
Sbjct: 701 TKLLKAGAK---PDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREK 757
Query: 689 DVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEK 748
D I SCVRA++ + IGFL D RR+NV +TRA+ +++VG L + WN+L+ ++
Sbjct: 758 DFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKE 817
Query: 749 QDCL 752
Q L
Sbjct: 818 QKVL 821
>gi|327200471|pdb|2XZO|A Chain A, Upf1 Helicase - Rna Complex
gi|327200473|pdb|2XZP|A Chain A, Upf1 Helicase
Length = 623
Score = 196 bits (499), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 136/424 (32%), Positives = 222/424 (52%), Gaps = 45/424 (10%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + +R+ VLVCAPSN A+D++ ++ TG+ K+VR
Sbjct: 203 PGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGL----------KVVR 252
Query: 413 IGLKAHHSVNSVA-----------IDHL-----VEQKRDD----SAADKQKHGATRKDRD 452
+ K+ +++S +D + ++Q +D+ S+AD++++ A + R
Sbjct: 253 LCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSADEKRYRALK--RT 310
Query: 453 SIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVF 512
+ R ++N VI C+ + +G L+K+ F ++IDE+ QA EP +VP+ G KQ+
Sbjct: 311 AERELLMNADVICCTCVG-AGDPRLAKMQ--FRSILIDESTQATEPECMVPVVLGAKQLI 367
Query: 513 LVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYD 572
LVGD QL V+ A G SLF+RL G L+ QYRMHP + +FPS FY+
Sbjct: 368 LVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYE 427
Query: 573 EALEDGSDVEDYTTR--DWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
+L++G D + D+ + P FF + +G+E + S++N E V +
Sbjct: 428 GSLQNGVTAADRVKKGFDFQWPQPDKPM-FFYVTQGQEEIASSGTSYLNRTEAANVEKIT 486
Query: 631 HKLISMYPQLKSSSQLAIISPYRHQVKQFQE--RFKETFGVESQKVVDITTVDGCQGREK 688
KL+ + Q+ II+PY Q + +F + + + V+I +VD QGREK
Sbjct: 487 TKLLKAGAK---PDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREK 543
Query: 689 DVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEK 748
D I SCVRA++ + IGFL D RR+NV +TRA+ +++VG L + WN+L+ ++
Sbjct: 544 DFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKE 603
Query: 749 QDCL 752
Q L
Sbjct: 604 QKVL 607
>gi|392333562|ref|XP_003752928.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 2
[Rattus norvegicus]
gi|392353859|ref|XP_003751614.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 1
[Rattus norvegicus]
Length = 1124
Score = 196 bits (499), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 136/424 (32%), Positives = 222/424 (52%), Gaps = 45/424 (10%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + +R+ VLVCAPSN A+D++ ++ TG+ K+VR
Sbjct: 500 PGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGL----------KVVR 549
Query: 413 IGLKAHHSVNSVA-----------IDHL-----VEQKRDD----SAADKQKHGATRKDRD 452
+ K+ +++S +D + ++Q +D+ S+AD++++ A + R
Sbjct: 550 LCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSADEKRYRALK--RT 607
Query: 453 SIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVF 512
+ R ++N VI C+ + +G L+K+ F ++IDE+ QA EP +VP+ G KQ+
Sbjct: 608 AERELLMNADVICCTCVG-AGDPRLAKMQ--FRSILIDESTQATEPECMVPVVLGAKQLI 664
Query: 513 LVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYD 572
LVGD QL V+ A G SLF+RL G L+ QYRMHP + +FPS FY+
Sbjct: 665 LVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYE 724
Query: 573 EALEDGSDVEDYTTR--DWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
+L++G D + D+ + P FF + +G+E + S++N E V +
Sbjct: 725 GSLQNGVTAADRVKKGFDFQWPQPDKPM-FFYVTQGQEEIASSGTSYLNRTEAANVEKIT 783
Query: 631 HKLISMYPQLKSSSQLAIISPYRHQVKQFQE--RFKETFGVESQKVVDITTVDGCQGREK 688
KL+ + Q+ II+PY Q + +F + + + V+I +VD QGREK
Sbjct: 784 TKLLKAGAK---PDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREK 840
Query: 689 DVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEK 748
D I SCVRA++ + IGFL D RR+NV +TRA+ +++VG L + WN+L+ ++
Sbjct: 841 DFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLSYYKE 900
Query: 749 QDCL 752
Q L
Sbjct: 901 QKAL 904
>gi|358412841|ref|XP_001789963.2| PREDICTED: regulator of nonsense transcripts 1 [Bos taurus]
Length = 1063
Score = 196 bits (499), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 136/424 (32%), Positives = 222/424 (52%), Gaps = 45/424 (10%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + +R+ VLVCAPSN A+D++ ++ TG+ K+VR
Sbjct: 439 PGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGL----------KVVR 488
Query: 413 IGLKAHHSVNSVA-----------IDHL-----VEQKRDD----SAADKQKHGATRKDRD 452
+ K+ +++S +D + ++Q +D+ S+AD++++ A + R
Sbjct: 489 LCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSADEKRYRALK--RT 546
Query: 453 SIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVF 512
+ R ++N VI C+ + +G L+K+ F ++IDE+ QA EP +VP+ G KQ+
Sbjct: 547 AERELLMNADVICCTCVG-AGDPRLAKMQ--FRSILIDESTQATEPECMVPVVLGAKQLI 603
Query: 513 LVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYD 572
LVGD QL V+ A G SLF+RL G L+ QYRMHP + +FPS FY+
Sbjct: 604 LVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYE 663
Query: 573 EALEDGSDVEDYTTR--DWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
+L++G D + D+ + P FF + +G+E + S++N E V +
Sbjct: 664 GSLQNGVTAADRVKKGFDFQWPQPDKPM-FFYVTQGQEEIASSGTSYLNRTEAANVEKIT 722
Query: 631 HKLISMYPQLKSSSQLAIISPYRHQVKQFQE--RFKETFGVESQKVVDITTVDGCQGREK 688
KL+ + Q+ II+PY Q + +F + + + V+I +VD QGREK
Sbjct: 723 TKLLKAGAK---PDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREK 779
Query: 689 DVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEK 748
D I SCVRA++ + IGFL D RR+NV +TRA+ +++VG L + WN+L+ ++
Sbjct: 780 DFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKE 839
Query: 749 QDCL 752
Q L
Sbjct: 840 QKVL 843
>gi|417413396|gb|JAA53027.1| Putative dna replication helicase, partial [Desmodus rotundus]
Length = 1052
Score = 196 bits (499), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 136/424 (32%), Positives = 222/424 (52%), Gaps = 45/424 (10%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + +R+ VLVCAPSN A+D++ ++ TG+ K+VR
Sbjct: 428 PGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGL----------KVVR 477
Query: 413 IGLKAHHSVNSVA-----------IDHL-----VEQKRDD----SAADKQKHGATRKDRD 452
+ K+ +++S +D + ++Q +D+ S+AD++++ A + R
Sbjct: 478 LCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSADEKRYRALK--RT 535
Query: 453 SIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVF 512
+ R ++N VI C+ + +G L+K+ F ++IDE+ QA EP +VP+ G KQ+
Sbjct: 536 AERELLMNADVICCTCVG-AGDPRLAKMQ--FRSILIDESTQATEPECMVPVVLGAKQLI 592
Query: 513 LVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYD 572
LVGD QL V+ A G SLF+RL G L+ QYRMHP + +FPS FY+
Sbjct: 593 LVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYE 652
Query: 573 EALEDGSDVEDYTTR--DWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
+L++G D + D+ + P FF + +G+E + S++N E V +
Sbjct: 653 GSLQNGVTAADRVKKGFDFQWPQPDKPM-FFYVTQGQEEIASSGTSYLNRTEAANVEKIT 711
Query: 631 HKLISMYPQLKSSSQLAIISPYRHQVKQFQE--RFKETFGVESQKVVDITTVDGCQGREK 688
KL+ + Q+ II+PY Q + +F + + + V+I +VD QGREK
Sbjct: 712 TKLLKAGAK---PDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREK 768
Query: 689 DVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEK 748
D I SCVRA++ + IGFL D RR+NV +TRA+ +++VG L + WN+L+ ++
Sbjct: 769 DFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKE 828
Query: 749 QDCL 752
Q L
Sbjct: 829 QKVL 832
>gi|149639074|ref|XP_001514946.1| PREDICTED: regulator of nonsense transcripts 1 [Ornithorhynchus
anatinus]
Length = 1113
Score = 196 bits (499), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 136/424 (32%), Positives = 222/424 (52%), Gaps = 45/424 (10%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + +R+ VLVCAPSN A+D++ ++ TG+ K+VR
Sbjct: 491 PGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGL----------KVVR 540
Query: 413 IGLKAHHSVNSVA-----------IDHL-----VEQKRDD----SAADKQKHGATRKDRD 452
+ K+ +++S +D + ++Q +D+ S+AD++++ A + R
Sbjct: 541 LCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSADEKRYRALK--RT 598
Query: 453 SIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVF 512
+ R ++N VI C+ + +G L+K+ F ++IDE+ QA EP +VP+ G KQ+
Sbjct: 599 AERELLMNADVICCTCVG-AGDPRLAKMQ--FRSILIDESTQATEPECMVPVVLGAKQLI 655
Query: 513 LVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYD 572
LVGD QL V+ A G SLF+RL G L+ QYRMHP + +FPS FY+
Sbjct: 656 LVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYE 715
Query: 573 EALEDGSDVEDYTTR--DWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
+L++G D + D+ + P FF + +G+E + S++N E V +
Sbjct: 716 GSLQNGVTAADRVKKGFDFQWPQPDKPM-FFYVTQGQEEIASSGTSYLNRTEAANVEKIT 774
Query: 631 HKLISMYPQLKSSSQLAIISPYRHQVKQFQE--RFKETFGVESQKVVDITTVDGCQGREK 688
KL+ + Q+ II+PY Q + +F + + + V+I +VD QGREK
Sbjct: 775 TKLLKAGAK---PDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREK 831
Query: 689 DVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEK 748
D I SCVRA++ + IGFL D RR+NV +TRA+ +++VG L + WN+L+ ++
Sbjct: 832 DFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKE 891
Query: 749 QDCL 752
Q L
Sbjct: 892 QKVL 895
>gi|297476262|ref|XP_002688572.1| PREDICTED: regulator of nonsense transcripts 1 [Bos taurus]
gi|296486196|tpg|DAA28309.1| TPA: UPF1 regulator of nonsense transcripts homolog [Bos taurus]
Length = 1116
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 136/424 (32%), Positives = 222/424 (52%), Gaps = 45/424 (10%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + +R+ VLVCAPSN A+D++ ++ TG+ K+VR
Sbjct: 492 PGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGL----------KVVR 541
Query: 413 IGLKAHHSVNSVA-----------IDHL-----VEQKRDD----SAADKQKHGATRKDRD 452
+ K+ +++S +D + ++Q +D+ S+AD++++ A + R
Sbjct: 542 LCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSADEKRYRALK--RT 599
Query: 453 SIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVF 512
+ R ++N VI C+ + +G L+K+ F ++IDE+ QA EP +VP+ G KQ+
Sbjct: 600 AERELLMNADVICCTCVG-AGDPRLAKMQ--FRSILIDESTQATEPECMVPVVLGAKQLI 656
Query: 513 LVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYD 572
LVGD QL V+ A G SLF+RL G L+ QYRMHP + +FPS FY+
Sbjct: 657 LVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYE 716
Query: 573 EALEDGSDVEDYTTR--DWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
+L++G D + D+ + P FF + +G+E + S++N E V +
Sbjct: 717 GSLQNGVTAADRVKKGFDFQWPQPDKPM-FFYVTQGQEEIASSGTSYLNRTEAANVEKIT 775
Query: 631 HKLISMYPQLKSSSQLAIISPYRHQVKQFQE--RFKETFGVESQKVVDITTVDGCQGREK 688
KL+ + Q+ II+PY Q + +F + + + V+I +VD QGREK
Sbjct: 776 TKLLKAGAK---PDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREK 832
Query: 689 DVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEK 748
D I SCVRA++ + IGFL D RR+NV +TRA+ +++VG L + WN+L+ ++
Sbjct: 833 DFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKE 892
Query: 749 QDCL 752
Q L
Sbjct: 893 QKVL 896
>gi|1885356|gb|AAC51140.1| homolog of yeast UPF1 [Homo sapiens]
Length = 1118
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 136/424 (32%), Positives = 222/424 (52%), Gaps = 45/424 (10%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + +R+ VLVCAPSN A+D++ ++ TG+ K+VR
Sbjct: 494 PGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGL----------KVVR 543
Query: 413 IGLKAHHSVNSVA-----------IDHL-----VEQKRDD----SAADKQKHGATRKDRD 452
+ K+ +++S +D + ++Q +D+ S+AD++++ A + R
Sbjct: 544 LCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSADEKRYRALK--RT 601
Query: 453 SIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVF 512
+ R ++N VI C+ + +G L+K+ F ++IDE+ QA EP +VP+ G KQ+
Sbjct: 602 AERELLMNADVICCTCVG-AGDPRLAKMQ--FRSILIDESTQATEPECMVPVVLGAKQLI 658
Query: 513 LVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYD 572
LVGD QL V+ A G SLF+RL G L+ QYRMHP + +FPS FY+
Sbjct: 659 LVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYE 718
Query: 573 EALEDGSDVEDYTTR--DWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
+L++G D + D+ + P FF + +G+E + S++N E V +
Sbjct: 719 GSLQNGVTAADRVKKGFDFQWPQPDKPM-FFYVTQGQEEIASSGTSYLNRTEAANVEKIT 777
Query: 631 HKLISMYPQLKSSSQLAIISPYRHQVKQFQE--RFKETFGVESQKVVDITTVDGCQGREK 688
KL+ + Q+ II+PY Q + +F + + + V+I +VD QGREK
Sbjct: 778 TKLLKAGAK---PDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREK 834
Query: 689 DVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEK 748
D I SCVRA++ + IGFL D RR+NV +TRA+ +++VG L + WN+L+ ++
Sbjct: 835 DFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKE 894
Query: 749 QDCL 752
Q L
Sbjct: 895 QKVL 898
>gi|73986070|ref|XP_533868.2| PREDICTED: regulator of nonsense transcripts 1 [Canis lupus
familiaris]
Length = 1119
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 136/424 (32%), Positives = 222/424 (52%), Gaps = 45/424 (10%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + +R+ VLVCAPSN A+D++ ++ TG+ K+VR
Sbjct: 495 PGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGL----------KVVR 544
Query: 413 IGLKAHHSVNSVA-----------IDHL-----VEQKRDD----SAADKQKHGATRKDRD 452
+ K+ +++S +D + ++Q +D+ S+AD++++ A + R
Sbjct: 545 LCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSADEKRYRALK--RT 602
Query: 453 SIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVF 512
+ R ++N VI C+ + +G L+K+ F ++IDE+ QA EP +VP+ G KQ+
Sbjct: 603 AERELLMNADVICCTCVG-AGDPRLAKMQ--FRSILIDESTQATEPECMVPVVLGAKQLI 659
Query: 513 LVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYD 572
LVGD QL V+ A G SLF+RL G L+ QYRMHP + +FPS FY+
Sbjct: 660 LVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYE 719
Query: 573 EALEDGSDVEDYTTR--DWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
+L++G D + D+ + P FF + +G+E + S++N E V +
Sbjct: 720 GSLQNGVTAADRVKKGFDFQWPQPDKPM-FFYVTQGQEEIASSGTSYLNRTEAANVEKIT 778
Query: 631 HKLISMYPQLKSSSQLAIISPYRHQVKQFQE--RFKETFGVESQKVVDITTVDGCQGREK 688
KL+ + Q+ II+PY Q + +F + + + V+I +VD QGREK
Sbjct: 779 TKLLKAGAK---PDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREK 835
Query: 689 DVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEK 748
D I SCVRA++ + IGFL D RR+NV +TRA+ +++VG L + WN+L+ ++
Sbjct: 836 DFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKE 895
Query: 749 QDCL 752
Q L
Sbjct: 896 QKVL 899
>gi|48727634|gb|AAT46119.1| RENT1 [Mus musculus]
Length = 1113
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 136/424 (32%), Positives = 222/424 (52%), Gaps = 45/424 (10%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + +R+ VLVCAPSN A+D++ ++ TG+ K+VR
Sbjct: 489 PGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGL----------KVVR 538
Query: 413 IGLKAHHSVNSVA-----------IDHL-----VEQKRDD----SAADKQKHGATRKDRD 452
+ K+ +++S +D + ++Q +D+ S+AD++++ A + R
Sbjct: 539 LCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSADEKRYRALK--RT 596
Query: 453 SIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVF 512
+ R ++N VI C+ + +G L+K+ F ++IDE+ QA EP +VP+ G KQ+
Sbjct: 597 AERELLMNADVICCTCVG-AGDPRLAKMQ--FRSILIDESTQATEPECMVPVVLGAKQLI 653
Query: 513 LVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYD 572
LVGD QL V+ A G SLF+RL G L+ QYRMHP + +FPS FY+
Sbjct: 654 LVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYE 713
Query: 573 EALEDGSDVEDYTTR--DWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
+L++G D + D+ + P FF + +G+E + S++N E V +
Sbjct: 714 GSLQNGVTAADRVKKGFDFQWPQPDKPM-FFYVTQGQEEIASSGTSYLNRTEAANVEKIT 772
Query: 631 HKLISMYPQLKSSSQLAIISPYRHQVKQFQE--RFKETFGVESQKVVDITTVDGCQGREK 688
KL+ + Q+ II+PY Q + +F + + + V+I +VD QGREK
Sbjct: 773 TKLLKAGAK---PDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREK 829
Query: 689 DVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEK 748
D I SCVRA++ + IGFL D RR+NV +TRA+ +++VG L + WN+L+ ++
Sbjct: 830 DFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLSYYKE 889
Query: 749 QDCL 752
Q L
Sbjct: 890 QKAL 893
>gi|344283632|ref|XP_003413575.1| PREDICTED: regulator of nonsense transcripts 1-like [Loxodonta
africana]
Length = 1117
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 136/424 (32%), Positives = 222/424 (52%), Gaps = 45/424 (10%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + +R+ VLVCAPSN A+D++ ++ TG+ K+VR
Sbjct: 493 PGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGL----------KVVR 542
Query: 413 IGLKAHHSVNSVA-----------IDHL-----VEQKRDD----SAADKQKHGATRKDRD 452
+ K+ +++S +D + ++Q +D+ S+AD++++ A + R
Sbjct: 543 LCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSADEKRYRALK--RT 600
Query: 453 SIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVF 512
+ R ++N VI C+ + +G L+K+ F ++IDE+ QA EP +VP+ G KQ+
Sbjct: 601 AERELLMNADVICCTCVG-AGDPRLAKMQ--FRSILIDESTQATEPECMVPVVLGAKQLI 657
Query: 513 LVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYD 572
LVGD QL V+ A G SLF+RL G L+ QYRMHP + +FPS FY+
Sbjct: 658 LVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYE 717
Query: 573 EALEDGSDVEDYTTR--DWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
+L++G D + D+ + P FF + +G+E + S++N E V +
Sbjct: 718 GSLQNGVTAADRVKKGFDFQWPQPDKPM-FFYVTQGQEEIASSGTSYLNRTEAANVEKIT 776
Query: 631 HKLISMYPQLKSSSQLAIISPYRHQVKQFQE--RFKETFGVESQKVVDITTVDGCQGREK 688
KL+ + Q+ II+PY Q + +F + + + V+I +VD QGREK
Sbjct: 777 TKLLKAGAK---PDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREK 833
Query: 689 DVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEK 748
D I SCVRA++ + IGFL D RR+NV +TRA+ +++VG L + WN+L+ ++
Sbjct: 834 DFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKE 893
Query: 749 QDCL 752
Q L
Sbjct: 894 QKVL 897
>gi|334326682|ref|XP_003340788.1| PREDICTED: LOW QUALITY PROTEIN: regulator of nonsense transcripts
1-like [Monodelphis domestica]
Length = 1122
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 136/424 (32%), Positives = 222/424 (52%), Gaps = 45/424 (10%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + +R+ VLVCAPSN A+D++ ++ TG+ K+VR
Sbjct: 498 PGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGL----------KVVR 547
Query: 413 IGLKAHHSVNSVA-----------IDHL-----VEQKRDD----SAADKQKHGATRKDRD 452
+ K+ +++S +D + ++Q +D+ S+AD++++ A + R
Sbjct: 548 LCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSADEKRYRALK--RT 605
Query: 453 SIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVF 512
+ R ++N VI C+ + +G L+K+ F ++IDE+ QA EP +VP+ G KQ+
Sbjct: 606 AERELLMNADVICCTCVG-AGDPRLAKMQ--FRSILIDESTQATEPECMVPVVLGAKQLI 662
Query: 513 LVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYD 572
LVGD QL V+ A G SLF+RL G L+ QYRMHP + +FPS FY+
Sbjct: 663 LVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYE 722
Query: 573 EALEDGSDVEDYTTR--DWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
+L++G D + D+ + P FF + +G+E + S++N E V +
Sbjct: 723 GSLQNGVTAADRVKKGFDFQWPQPDKPM-FFYVTQGQEEIASSGTSYLNRTEAANVEKIT 781
Query: 631 HKLISMYPQLKSSSQLAIISPYRHQVKQFQE--RFKETFGVESQKVVDITTVDGCQGREK 688
KL+ + Q+ II+PY Q + +F + + + V+I +VD QGREK
Sbjct: 782 TKLLKAGAK---PDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREK 838
Query: 689 DVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEK 748
D I SCVRA++ + IGFL D RR+NV +TRA+ +++VG L + WN+L+ ++
Sbjct: 839 DFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKE 898
Query: 749 QDCL 752
Q L
Sbjct: 899 QKVL 902
>gi|295657686|ref|XP_002789409.1| ATP-dependent helicase NAM7 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226283831|gb|EEH39397.1| ATP-dependent helicase NAM7 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 1087
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 146/479 (30%), Positives = 238/479 (49%), Gaps = 58/479 (12%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR--IGLKAHH--------SVNSV 424
+VLVCAPSN A+D++ R+ TG++ + + + + V +G + H ++ V
Sbjct: 483 QVLVCAPSNVAVDQLCERIHKTGLKTVRVTAKSREDVESPVGFLSLHEQVHNNDSNIELV 542
Query: 425 AIDHLVEQKRDDSAADKQKHGATRKDRDSIRSA---ILNEAVIVCSTLSFSGSALLSKLN 481
++ L + + S+ D++K+ + +R+A IL+ A ++C T +G L+K
Sbjct: 543 KLNQLKAELGELSSQDEKKY------KQLVRAAEKEILSNADVICCTCVGAGDPRLAKFK 596
Query: 482 HGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKR 541
F V+IDE+ Q+ EP ++PL GCKQV LVGD QL +++ A G SLF+R
Sbjct: 597 --FRTVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFER 654
Query: 542 LQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRD----WHEYRCFGP 597
L G L QYRMHP + FPS FYD +L++G + +D W P
Sbjct: 655 LVILGCAPIRLNVQYRMHPCLSEFPSNMFYDGSLQNGVTESERLLKDVDFPWP--VAHNP 712
Query: 598 FSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMY--PQLKSSSQLAIISPYRHQ 655
F+ + G E A S++N E V K+++ + +K SS + II+PY Q
Sbjct: 713 MMFWS-NLGNEEISASGTSYLNRTEAANV----EKIVTRFFKAGVKPSS-IGIITPYEGQ 766
Query: 656 VKQFQERFKE--TFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRM 713
+ TF E K +++ +VD QGREKD + SCVR++D + IGFL+D RR+
Sbjct: 767 RSYVVSSMQATGTFKKELYKEIEVASVDAFQGREKDYIVLSCVRSNDHQGIGFLSDPRRL 826
Query: 714 NVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDC------------LFRVSKPYAS 761
NV +TRAK ++++G L + WN L+ ++++C L + S+P +
Sbjct: 827 NVALTRAKYGLVILGNPKVLSKHPLWNYLLLHFKEKNCLVEGPLSNLQVSLVQFSRPKQA 886
Query: 762 FFSDENLE---SMRKNATTDNVQGADGHVPHDDETMHYANTGDADQGQADDIDNADGDA 817
+ + + + N + V G +GH +D Y +TG DD+ + A
Sbjct: 887 YRGPQRFQVAYNHASNMASGMVNGRNGH--RND----YHDTGSVASCIPDDVSSVHSSA 939
>gi|355767117|gb|EHH62580.1| hypothetical protein EGM_20966 [Macaca fascicularis]
Length = 1041
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 136/424 (32%), Positives = 222/424 (52%), Gaps = 45/424 (10%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + +R+ VLVCAPSN A+D++ ++ TG+ K+VR
Sbjct: 417 PGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGL----------KVVR 466
Query: 413 IGLKAHHSVNSVA-----------IDHL-----VEQKRDD----SAADKQKHGATRKDRD 452
+ K+ +++S +D + ++Q +D+ S+AD++++ A + R
Sbjct: 467 LCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSADEKRYRALK--RT 524
Query: 453 SIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVF 512
+ R ++N VI C+ + +G L+K+ F ++IDE+ QA EP +VP+ G KQ+
Sbjct: 525 AERELLMNADVICCTCVG-AGDPRLAKMQ--FRSILIDESTQATEPECMVPVVLGAKQLI 581
Query: 513 LVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYD 572
LVGD QL V+ A G SLF+RL G L+ QYRMHP + +FPS FY+
Sbjct: 582 LVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYE 641
Query: 573 EALEDGSDVEDYTTR--DWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
+L++G D + D+ + P FF + +G+E + S++N E V +
Sbjct: 642 GSLQNGVTAADRVKKGFDFQWPQPDKPM-FFYVTQGQEEIASSGTSYLNRTEAANVEKIT 700
Query: 631 HKLISMYPQLKSSSQLAIISPYRHQVKQFQE--RFKETFGVESQKVVDITTVDGCQGREK 688
KL+ + Q+ II+PY Q + +F + + + V+I +VD QGREK
Sbjct: 701 TKLLKAGAK---PDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREK 757
Query: 689 DVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEK 748
D I SCVRA++ + IGFL D RR+NV +TRA+ +++VG L + WN+L+ ++
Sbjct: 758 DFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKE 817
Query: 749 QDCL 752
Q L
Sbjct: 818 QKVL 821
>gi|50509972|dbj|BAD30435.1| putative type 1 RNA helicase [Oryza sativa Japonica Group]
gi|222637078|gb|EEE67210.1| hypothetical protein OsJ_24327 [Oryza sativa Japonica Group]
Length = 1277
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 139/430 (32%), Positives = 222/430 (51%), Gaps = 55/430 (12%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + +++ + +VLVCAPSN A+D++ ++ +TG+ K+VR
Sbjct: 536 PGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISSTGL----------KVVR 585
Query: 413 IGLKAHHSVNSVAIDHL-------------------VEQKRDD----SAADKQKHGATRK 449
+ K+ +V+S ++HL ++Q +D+ S++D++K+ A ++
Sbjct: 586 LCAKSREAVSS-PVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKR 644
Query: 450 DRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCK 509
+ IL A ++C T +G L+ N F V+IDE+ QA EP L+PL G K
Sbjct: 645 ---ATEREILQSADVICCTCVGAGDPRLA--NFRFRQVLIDESTQATEPECLIPLVLGVK 699
Query: 510 QVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSRE 569
QV LVGD QL ++ A G SLF+RL G L+ QYRMHP + FPS
Sbjct: 700 QVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVILGVKPFRLQVQYRMHPCLSDFPSNC 759
Query: 570 FYDEALEDGSDVEDYTTR--DWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVL 627
FY+ L++G V + T D+ P FF + G+E A S++N E V
Sbjct: 760 FYEGTLQNGVTVNERQTPGIDFPWPVPNRPM-FFYVQMGQEEISASGTSYLNRTEAANV- 817
Query: 628 LLFHKLISMYPQLKSS---SQLAIISPYRHQVKQFQERFKETFGVESQ--KVVDITTVDG 682
K+++ + L+S SQ+ +I+PY Q + Q K +++ +VD
Sbjct: 818 ---EKIVTTF--LRSGVVPSQIGVITPYEGQRAYIVNYMSRNGSLRQQLYKEIEVASVDS 872
Query: 683 CQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNL 742
QGREKD I SCVR+++ + IGFL D RR+NV +TRA+ I+++G L + WN+L
Sbjct: 873 FQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNSL 932
Query: 743 VKSAEKQDCL 752
+ ++ +CL
Sbjct: 933 LTHYKEHECL 942
>gi|17380291|sp|Q92900.2|RENT1_HUMAN RecName: Full=Regulator of nonsense transcripts 1; AltName:
Full=ATP-dependent helicase RENT1; AltName:
Full=Nonsense mRNA reducing factor 1; Short=NORF1;
AltName: Full=Up-frameshift suppressor 1 homolog;
Short=hUpf1
gi|119605144|gb|EAW84738.1| UPF1 regulator of nonsense transcripts homolog (yeast), isoform
CRA_a [Homo sapiens]
gi|119605147|gb|EAW84741.1| UPF1 regulator of nonsense transcripts homolog (yeast), isoform
CRA_a [Homo sapiens]
Length = 1129
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 136/424 (32%), Positives = 222/424 (52%), Gaps = 45/424 (10%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + +R+ VLVCAPSN A+D++ ++ TG+ K+VR
Sbjct: 505 PGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGL----------KVVR 554
Query: 413 IGLKAHHSVNSVA-----------IDHL-----VEQKRDD----SAADKQKHGATRKDRD 452
+ K+ +++S +D + ++Q +D+ S+AD++++ A + R
Sbjct: 555 LCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSADEKRYRALK--RT 612
Query: 453 SIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVF 512
+ R ++N VI C+ + +G L+K+ F ++IDE+ QA EP +VP+ G KQ+
Sbjct: 613 AERELLMNADVICCTCVG-AGDPRLAKMQ--FRSILIDESTQATEPECMVPVVLGAKQLI 669
Query: 513 LVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYD 572
LVGD QL V+ A G SLF+RL G L+ QYRMHP + +FPS FY+
Sbjct: 670 LVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYE 729
Query: 573 EALEDGSDVEDYTTR--DWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
+L++G D + D+ + P FF + +G+E + S++N E V +
Sbjct: 730 GSLQNGVTAADRVKKGFDFQWPQPDKPM-FFYVTQGQEEIASSGTSYLNRTEAANVEKIT 788
Query: 631 HKLISMYPQLKSSSQLAIISPYRHQVKQFQE--RFKETFGVESQKVVDITTVDGCQGREK 688
KL+ + Q+ II+PY Q + +F + + + V+I +VD QGREK
Sbjct: 789 TKLLKAGAK---PDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREK 845
Query: 689 DVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEK 748
D I SCVRA++ + IGFL D RR+NV +TRA+ +++VG L + WN+L+ ++
Sbjct: 846 DFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKE 905
Query: 749 QDCL 752
Q L
Sbjct: 906 QKVL 909
>gi|410950946|ref|XP_003982163.1| PREDICTED: regulator of nonsense transcripts 1 [Felis catus]
Length = 1055
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 136/424 (32%), Positives = 222/424 (52%), Gaps = 45/424 (10%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + +R+ VLVCAPSN A+D++ ++ TG+ K+VR
Sbjct: 431 PGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGL----------KVVR 480
Query: 413 IGLKAHHSVNSVA-----------IDHL-----VEQKRDD----SAADKQKHGATRKDRD 452
+ K+ +++S +D + ++Q +D+ S+AD++++ A + R
Sbjct: 481 LCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSADEKRYRALK--RT 538
Query: 453 SIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVF 512
+ R ++N VI C+ + +G L+K+ F ++IDE+ QA EP +VP+ G KQ+
Sbjct: 539 AERELLMNADVICCTCVG-AGDPRLAKMQ--FRSILIDESTQATEPECMVPVVLGAKQLI 595
Query: 513 LVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYD 572
LVGD QL V+ A G SLF+RL G L+ QYRMHP + +FPS FY+
Sbjct: 596 LVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYE 655
Query: 573 EALEDGSDVEDYTTR--DWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
+L++G D + D+ + P FF + +G+E + S++N E V +
Sbjct: 656 GSLQNGVTAADRVKKGFDFQWPQPDKPM-FFYVTQGQEEIASSGTSYLNRTEAANVEKIT 714
Query: 631 HKLISMYPQLKSSSQLAIISPYRHQVKQFQE--RFKETFGVESQKVVDITTVDGCQGREK 688
KL+ + Q+ II+PY Q + +F + + + V+I +VD QGREK
Sbjct: 715 TKLLKAGAK---PDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREK 771
Query: 689 DVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEK 748
D I SCVRA++ + IGFL D RR+NV +TRA+ +++VG L + WN+L+ ++
Sbjct: 772 DFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKE 831
Query: 749 QDCL 752
Q L
Sbjct: 832 QKVL 835
>gi|225683333|gb|EEH21617.1| DNA-binding protein SMUBP-2 [Paracoccidioides brasiliensis Pb03]
Length = 1074
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 146/479 (30%), Positives = 238/479 (49%), Gaps = 58/479 (12%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR--IGLKAHH--------SVNSV 424
+VLVCAPSN A+D++ R+ TG++ + + + + V +G + H ++ V
Sbjct: 489 QVLVCAPSNVAVDQLCERIHKTGLKTVRVTAKSREDVESPVGFLSLHEQVHNNDSNIELV 548
Query: 425 AIDHLVEQKRDDSAADKQKHGATRKDRDSIRSA---ILNEAVIVCSTLSFSGSALLSKLN 481
++ L + + S+ D++K+ + +R+A IL+ A ++C T +G L+K
Sbjct: 549 KLNQLKAELGELSSQDEKKY------KQLVRAAEREILSNADVICCTCVGAGDPRLAKFK 602
Query: 482 HGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKR 541
F V+IDE+ Q+ EP ++PL GCKQV LVGD QL +++ A G SLF+R
Sbjct: 603 --FRTVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFER 660
Query: 542 LQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRD----WHEYRCFGP 597
L G L QYRMHP + FPS FYD +L++G + +D W P
Sbjct: 661 LVILGCAPIRLNVQYRMHPCLSEFPSNMFYDGSLQNGVTESERLLKDVDFPWPV--AHNP 718
Query: 598 FSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMY--PQLKSSSQLAIISPYRHQ 655
F+ + G E A S++N E V K+++ + +K SS + II+PY Q
Sbjct: 719 MMFWS-NLGNEEISASGTSYLNRTEAANV----EKIVTRFFKAGVKPSS-IGIITPYEGQ 772
Query: 656 VKQFQERFKE--TFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRM 713
+ TF E K +++ +VD QGREKD + SCVR++D + IGFL+D RR+
Sbjct: 773 RSYVVSSMQATGTFKKELYKEIEVASVDAFQGREKDYIVLSCVRSNDHQGIGFLSDPRRL 832
Query: 714 NVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDC------------LFRVSKPYAS 761
NV +TRAK ++++G L + WN L+ ++++C L + S+P +
Sbjct: 833 NVALTRAKYGLVILGNPKVLSKHPLWNYLLLHFKEKNCLVEGPLSNLQVSLVQFSRPKQA 892
Query: 762 FFSDENLE---SMRKNATTDNVQGADGHVPHDDETMHYANTGDADQGQADDIDNADGDA 817
+ + + + N + V G +GH +D Y +TG DD+ + A
Sbjct: 893 YRGPQRFQVAYNHASNMASGMVNGRNGH--RND----YHDTGSVASYIPDDVSSVHSSA 945
>gi|168274489|dbj|BAG09664.1| regulator of nonsense transcripts 1 [synthetic construct]
Length = 1129
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 136/424 (32%), Positives = 222/424 (52%), Gaps = 45/424 (10%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + +R+ VLVCAPSN A+D++ ++ TG+ K+VR
Sbjct: 505 PGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGL----------KVVR 554
Query: 413 IGLKAHHSVNSVA-----------IDHL-----VEQKRDD----SAADKQKHGATRKDRD 452
+ K+ +++S +D + ++Q +D+ S+AD++++ A + R
Sbjct: 555 LCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSADEKRYRALK--RT 612
Query: 453 SIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVF 512
+ R ++N VI C+ + +G L+K+ F ++IDE+ QA EP +VP+ G KQ+
Sbjct: 613 AERELLMNADVICCTCVG-AGDPRLAKMQ--FRSILIDESTQATEPECMVPVVLGAKQLI 669
Query: 513 LVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYD 572
LVGD QL V+ A G SLF+RL G L+ QYRMHP + +FPS FY+
Sbjct: 670 LVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYE 729
Query: 573 EALEDGSDVEDYTTR--DWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
+L++G D + D+ + P FF + +G+E + S++N E V +
Sbjct: 730 GSLQNGVTAADRVKKGFDFQWPQPDKPM-FFYVTQGQEEIASSGTSYLNRTEAANVEKIT 788
Query: 631 HKLISMYPQLKSSSQLAIISPYRHQVKQFQE--RFKETFGVESQKVVDITTVDGCQGREK 688
KL+ + Q+ II+PY Q + +F + + + V+I +VD QGREK
Sbjct: 789 TKLLKAGAK---PDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREK 845
Query: 689 DVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEK 748
D I SCVRA++ + IGFL D RR+NV +TRA+ +++VG L + WN+L+ ++
Sbjct: 846 DFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKE 905
Query: 749 QDCL 752
Q L
Sbjct: 906 QKVL 909
>gi|18375673|ref|NP_002902.2| regulator of nonsense transcripts 1 [Homo sapiens]
gi|2739355|gb|AAB94785.1| pNORF1 [Homo sapiens]
gi|3328175|gb|AAC26788.1| nonsense-mediated mRNA decay trans-acting factor [Homo sapiens]
gi|24981038|gb|AAH39817.1| UPF1 regulator of nonsense transcripts homolog (yeast) [Homo
sapiens]
gi|119605145|gb|EAW84739.1| UPF1 regulator of nonsense transcripts homolog (yeast), isoform
CRA_b [Homo sapiens]
gi|119605146|gb|EAW84740.1| UPF1 regulator of nonsense transcripts homolog (yeast), isoform
CRA_b [Homo sapiens]
gi|119605148|gb|EAW84742.1| UPF1 regulator of nonsense transcripts homolog (yeast), isoform
CRA_b [Homo sapiens]
gi|383420499|gb|AFH33463.1| regulator of nonsense transcripts 1 [Macaca mulatta]
gi|383420501|gb|AFH33464.1| regulator of nonsense transcripts 1 [Macaca mulatta]
gi|387540714|gb|AFJ70984.1| regulator of nonsense transcripts 1 [Macaca mulatta]
gi|410220482|gb|JAA07460.1| UPF1 regulator of nonsense transcripts homolog [Pan troglodytes]
gi|410307484|gb|JAA32342.1| UPF1 regulator of nonsense transcripts homolog [Pan troglodytes]
Length = 1118
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 136/424 (32%), Positives = 222/424 (52%), Gaps = 45/424 (10%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + +R+ VLVCAPSN A+D++ ++ TG+ K+VR
Sbjct: 494 PGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGL----------KVVR 543
Query: 413 IGLKAHHSVNSVA-----------IDHL-----VEQKRDD----SAADKQKHGATRKDRD 452
+ K+ +++S +D + ++Q +D+ S+AD++++ A + R
Sbjct: 544 LCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSADEKRYRALK--RT 601
Query: 453 SIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVF 512
+ R ++N VI C+ + +G L+K+ F ++IDE+ QA EP +VP+ G KQ+
Sbjct: 602 AERELLMNADVICCTCVG-AGDPRLAKMQ--FRSILIDESTQATEPECMVPVVLGAKQLI 658
Query: 513 LVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYD 572
LVGD QL V+ A G SLF+RL G L+ QYRMHP + +FPS FY+
Sbjct: 659 LVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYE 718
Query: 573 EALEDGSDVEDYTTR--DWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
+L++G D + D+ + P FF + +G+E + S++N E V +
Sbjct: 719 GSLQNGVTAADRVKKGFDFQWPQPDKPM-FFYVTQGQEEIASSGTSYLNRTEAANVEKIT 777
Query: 631 HKLISMYPQLKSSSQLAIISPYRHQVKQFQE--RFKETFGVESQKVVDITTVDGCQGREK 688
KL+ + Q+ II+PY Q + +F + + + V+I +VD QGREK
Sbjct: 778 TKLLKAGAK---PDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREK 834
Query: 689 DVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEK 748
D I SCVRA++ + IGFL D RR+NV +TRA+ +++VG L + WN+L+ ++
Sbjct: 835 DFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKE 894
Query: 749 QDCL 752
Q L
Sbjct: 895 QKVL 898
>gi|384939998|gb|AFI33604.1| regulator of nonsense transcripts 1 [Macaca mulatta]
gi|384940000|gb|AFI33605.1| regulator of nonsense transcripts 1 [Macaca mulatta]
Length = 1118
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 136/424 (32%), Positives = 222/424 (52%), Gaps = 45/424 (10%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + +R+ VLVCAPSN A+D++ ++ TG+ K+VR
Sbjct: 494 PGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGL----------KVVR 543
Query: 413 IGLKAHHSVNSVA-----------IDHL-----VEQKRDD----SAADKQKHGATRKDRD 452
+ K+ +++S +D + ++Q +D+ S+AD++++ A + R
Sbjct: 544 LCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSADEKRYRALK--RT 601
Query: 453 SIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVF 512
+ R ++N VI C+ + +G L+K+ F ++IDE+ QA EP +VP+ G KQ+
Sbjct: 602 AERELLMNADVICCTCVG-AGDPRLAKMQ--FRSILIDESTQATEPECMVPVVLGAKQLI 658
Query: 513 LVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYD 572
LVGD QL V+ A G SLF+RL G L+ QYRMHP + +FPS FY+
Sbjct: 659 LVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYE 718
Query: 573 EALEDGSDVEDYTTR--DWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
+L++G D + D+ + P FF + +G+E + S++N E V +
Sbjct: 719 GSLQNGVTAADRVKKGFDFQWPQPDKPM-FFYVTQGQEEIASSGTSYLNRTEAANVEKIT 777
Query: 631 HKLISMYPQLKSSSQLAIISPYRHQVKQFQE--RFKETFGVESQKVVDITTVDGCQGREK 688
KL+ + Q+ II+PY Q + +F + + + V+I +VD QGREK
Sbjct: 778 TKLLKAGAK---PDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREK 834
Query: 689 DVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEK 748
D I SCVRA++ + IGFL D RR+NV +TRA+ +++VG L + WN+L+ ++
Sbjct: 835 DFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKE 894
Query: 749 QDCL 752
Q L
Sbjct: 895 QKVL 898
>gi|363743891|ref|XP_418237.3| PREDICTED: regulator of nonsense transcripts 1 [Gallus gallus]
Length = 1096
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 136/424 (32%), Positives = 222/424 (52%), Gaps = 45/424 (10%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + +R+ VLVCAPSN A+D++ ++ TG+ K+VR
Sbjct: 472 PGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGL----------KVVR 521
Query: 413 IGLKAHHSVNSVA-----------IDHL-----VEQKRDD----SAADKQKHGATRKDRD 452
+ K+ +++S +D + ++Q +D+ S+AD++++ A + R
Sbjct: 522 LCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSADEKRYRALK--RT 579
Query: 453 SIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVF 512
+ R ++N VI C+ + +G L+K+ F ++IDE+ QA EP +VP+ G KQ+
Sbjct: 580 AERELLMNADVICCTCVG-AGDPRLAKMQ--FRSILIDESTQATEPECMVPVVLGAKQLI 636
Query: 513 LVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYD 572
LVGD QL V+ A G SLF+RL G L+ QYRMHP + +FPS FY+
Sbjct: 637 LVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYE 696
Query: 573 EALEDGSDVEDYTTR--DWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
+L++G D + D+ + P FF + +G+E + S++N E V +
Sbjct: 697 GSLQNGVTAADRVKKGFDFQWPQPDKPM-FFYVTQGQEEIASSGTSYLNRTEAANVEKIT 755
Query: 631 HKLISMYPQLKSSSQLAIISPYRHQVKQFQE--RFKETFGVESQKVVDITTVDGCQGREK 688
KL+ + Q+ II+PY Q + +F + + + V+I +VD QGREK
Sbjct: 756 TKLLKAGAK---PDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREK 812
Query: 689 DVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEK 748
D I SCVRA++ + IGFL D RR+NV +TRA+ +++VG L + WN+L+ ++
Sbjct: 813 DFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKE 872
Query: 749 QDCL 752
Q L
Sbjct: 873 QKVL 876
>gi|297685576|ref|XP_002820362.1| PREDICTED: probable helicase senataxin [Pongo abelii]
Length = 2678
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 121/319 (37%), Positives = 172/319 (53%), Gaps = 27/319 (8%)
Query: 455 RSAILNEAVIVCSTLSFSGSALLSKLNHG-----FDVVIIDEAAQAVEPATLVPLATGCK 509
+S I+ E+ ++C TLS SG LL G F VI+DEA Q+ E TL PL C
Sbjct: 2142 QSIIILESHVICCTLSTSGGLLLESAFRGQGGVPFSCVIVDEAGQSCEIETLTPLIHRCN 2201
Query: 510 QVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQR-----------AGYPVKMLKTQYRM 558
++ LVGDP QLP TVIS A+ GY S+ R R + P+ L QYRM
Sbjct: 2202 KLILVGDPKQLPPTVISMKAQEYGYDQSMMARFCRLLEENVEHNMISRLPILQLTVQYRM 2261
Query: 559 HPEVRSFPSREFYDEALEDGSDVEDY-TTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSW 617
HP++ FPS Y+ L+ E + DW F P+ FD+ +G E + + S+
Sbjct: 2262 HPDICLFPSNYVYNRNLKTNRQTEAIRCSSDWP----FQPYLVFDVGDGSERR--DNDSY 2315
Query: 618 INIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDI 677
IN+ E+ V+ + KLI + S + II+ Y+ Q Q+ + F + VD
Sbjct: 2316 INVQEIKLVMEII-KLIKDKRKDVSFRNIGIITHYKAQKTMIQKDLDKEFDRKGPAEVD- 2373
Query: 678 TTVDGCQGREKDVAIFSCVRA-SDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLRED 736
TVD QGR+KD I +CVRA S + SIGFLA +R+NV ITRAK S+ ++G TL E+
Sbjct: 2374 -TVDAFQGRQKDCVIVTCVRANSVQGSIGFLASLQRLNVTITRAKYSLFILGHLRTLMEN 2432
Query: 737 KHWNNLVKSAEKQDCLFRV 755
+HWN L++ A+K+ + +
Sbjct: 2433 QHWNQLIQDAQKRGAIIKT 2451
>gi|40788920|dbj|BAA19664.2| KIAA0221 [Homo sapiens]
Length = 1151
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 136/424 (32%), Positives = 222/424 (52%), Gaps = 45/424 (10%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + +R+ VLVCAPSN A+D++ ++ TG+ K+VR
Sbjct: 527 PGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGL----------KVVR 576
Query: 413 IGLKAHHSVNSVA-----------IDHL-----VEQKRDD----SAADKQKHGATRKDRD 452
+ K+ +++S +D + ++Q +D+ S+AD++++ A + R
Sbjct: 577 LCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSADEKRYRALK--RT 634
Query: 453 SIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVF 512
+ R ++N VI C+ + +G L+K+ F ++IDE+ QA EP +VP+ G KQ+
Sbjct: 635 AERELLMNADVICCTCVG-AGDPRLAKMQ--FRSILIDESTQATEPECMVPVVLGAKQLI 691
Query: 513 LVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYD 572
LVGD QL V+ A G SLF+RL G L+ QYRMHP + +FPS FY+
Sbjct: 692 LVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYE 751
Query: 573 EALEDGSDVEDYTTR--DWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
+L++G D + D+ + P FF + +G+E + S++N E V +
Sbjct: 752 GSLQNGVTAADRVKKGFDFQWPQPDKPM-FFYVTQGQEEIASSGTSYLNRTEAANVEKIT 810
Query: 631 HKLISMYPQLKSSSQLAIISPYRHQVKQFQE--RFKETFGVESQKVVDITTVDGCQGREK 688
KL+ + Q+ II+PY Q + +F + + + V+I +VD QGREK
Sbjct: 811 TKLLKAGAK---PDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREK 867
Query: 689 DVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEK 748
D I SCVRA++ + IGFL D RR+NV +TRA+ +++VG L + WN+L+ ++
Sbjct: 868 DFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKE 927
Query: 749 QDCL 752
Q L
Sbjct: 928 QKVL 931
>gi|353241966|emb|CCA73744.1| related to regulator of nonsense transcripts 1 [Piriformospora
indica DSM 11827]
Length = 850
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 141/422 (33%), Positives = 207/422 (49%), Gaps = 66/422 (15%)
Query: 376 VLVCAPSNSALDEIV----------LRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVA 425
+LVC +N A+D +V LR+ N G P++V+I +N +A
Sbjct: 374 LLVCTYTNVAVDNLVEGIADAGMNPLRVGNEGGAQMERHPRWPEVVKI-------MNEIA 426
Query: 426 ----IDHLVEQKRDDSAADKQKHGATR-------------KDRDSIRSAILNEAVIVCST 468
I + ++ + +D+QK +R K ++R I A ++C+T
Sbjct: 427 QIRQIRDRLRREMGSAPSDQQKESISRLGNKIHLLRESKAKLESAMRYMIFKSADVICTT 486
Query: 469 LSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPV 528
+GS+ ++ F VV +DEA+ + EPA+L+PL GCK + L+GD QLP + S +
Sbjct: 487 CITAGSSAFRMMD--FPVVFLDEASMSTEPASLIPLMHGCKHLALIGDHKQLPPVITSEL 544
Query: 529 AEHLGYGTSLFKRLQRAG-YPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVED---- 583
A+ G G SLF+RL G P ML TQYRMHP + +FPS EFY +AL DG+
Sbjct: 545 AKEGGLGKSLFERLIEEGSVPSVMLDTQYRMHPSISAFPSDEFYGKALRDGTISPAGGVP 604
Query: 584 ---------YTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLI 634
+ R + P F H+ E + S N++E+ V + L+
Sbjct: 605 ATLAPPHSMHLARRKSKLTGEIPAVLFIHHDNHEI--SRDRSRANLEEMKIVAAVLEDLL 662
Query: 635 SMYPQLKSSSQLAIISPYRHQVKQFQERFKE----------TFG---VESQKVVDITTVD 681
M P L+ + IISPY QV+ + KE G + V+I TVD
Sbjct: 663 LMNPGLRGRD-IGIISPYVAQVRMLNKMLKEDSSWADAFRDALGDPRCHELQDVEIKTVD 721
Query: 682 GCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNN 741
G +GREK++ IFS VR + IGFLAD RRMNV +TRAK ++ VVG STL + +H N
Sbjct: 722 GFEGREKEIIIFSTVRNNSWGHIGFLADRRRMNVALTRAKRALFVVGSISTLSKGRHGGN 781
Query: 742 LV 743
+
Sbjct: 782 FL 783
>gi|395847959|ref|XP_003796631.1| PREDICTED: regulator of nonsense transcripts 1 [Otolemur garnettii]
Length = 1118
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 136/424 (32%), Positives = 222/424 (52%), Gaps = 45/424 (10%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + +R+ VLVCAPSN A+D++ ++ TG+ K+VR
Sbjct: 494 PGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGL----------KVVR 543
Query: 413 IGLKAHHSVNSVA-----------IDHL-----VEQKRDD----SAADKQKHGATRKDRD 452
+ K+ +++S +D + ++Q +D+ S+AD++++ A + R
Sbjct: 544 LCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSADEKRYRALK--RT 601
Query: 453 SIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVF 512
+ R ++N VI C+ + +G L+K+ F ++IDE+ QA EP +VP+ G KQ+
Sbjct: 602 AERELLMNADVICCTCVG-AGDPRLAKMQ--FRSILIDESTQATEPECMVPVVLGAKQLI 658
Query: 513 LVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYD 572
LVGD QL V+ A G SLF+RL G L+ QYRMHP + +FPS FY+
Sbjct: 659 LVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYE 718
Query: 573 EALEDGSDVEDYTTR--DWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
+L++G D + D+ + P FF + +G+E + S++N E V +
Sbjct: 719 GSLQNGVTAADRVKKGFDFQWPQPDKPM-FFYVTQGQEEIASSGTSYLNRTEAANVEKIT 777
Query: 631 HKLISMYPQLKSSSQLAIISPYRHQVKQFQE--RFKETFGVESQKVVDITTVDGCQGREK 688
KL+ + Q+ II+PY Q + +F + + + V+I +VD QGREK
Sbjct: 778 TKLLKAGAK---PDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREK 834
Query: 689 DVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEK 748
D I SCVRA++ + IGFL D RR+NV +TRA+ +++VG L + WN+L+ ++
Sbjct: 835 DFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKE 894
Query: 749 QDCL 752
Q L
Sbjct: 895 QKVL 898
>gi|126030570|pdb|2GJK|A Chain A, Structural And Functional Insights Into The Human Upf1
Helicase Core
gi|126030579|pdb|2GK6|A Chain A, Structural And Functional Insights Into The Human Upf1
Helicase Core
gi|126030580|pdb|2GK6|B Chain B, Structural And Functional Insights Into The Human Upf1
Helicase Core
gi|126030581|pdb|2GK7|A Chain A, Structural And Functional Insights Into The Human Upf1
Helicase Core
Length = 624
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 136/424 (32%), Positives = 222/424 (52%), Gaps = 45/424 (10%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + +R+ VLVCAPSN A+D++ ++ TG+ K+VR
Sbjct: 204 PGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGL----------KVVR 253
Query: 413 IGLKAHHSVNSVA-----------IDHL-----VEQKRDD----SAADKQKHGATRKDRD 452
+ K+ +++S +D + ++Q +D+ S+AD++++ A + R
Sbjct: 254 LCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSADEKRYRALK--RT 311
Query: 453 SIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVF 512
+ R ++N VI C+ + +G L+K+ F ++IDE+ QA EP +VP+ G KQ+
Sbjct: 312 AERELLMNADVICCTCVG-AGDPRLAKMQ--FRSILIDESTQATEPECMVPVVLGAKQLI 368
Query: 513 LVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYD 572
LVGD QL V+ A G SLF+RL G L+ QYRMHP + +FPS FY+
Sbjct: 369 LVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYE 428
Query: 573 EALEDGSDVEDYTTR--DWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
+L++G D + D+ + P FF + +G+E + S++N E V +
Sbjct: 429 GSLQNGVTAADRVKKGFDFQWPQPDKPM-FFYVTQGQEEIASSGTSYLNRTEAANVEKIT 487
Query: 631 HKLISMYPQLKSSSQLAIISPYRHQVKQFQE--RFKETFGVESQKVVDITTVDGCQGREK 688
KL+ + Q+ II+PY Q + +F + + + V+I +VD QGREK
Sbjct: 488 TKLLKAGAK---PDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREK 544
Query: 689 DVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEK 748
D I SCVRA++ + IGFL D RR+NV +TRA+ +++VG L + WN+L+ ++
Sbjct: 545 DFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKE 604
Query: 749 QDCL 752
Q L
Sbjct: 605 QKVL 608
>gi|119608404|gb|EAW87998.1| senataxin, isoform CRA_b [Homo sapiens]
gi|119608405|gb|EAW87999.1| senataxin, isoform CRA_b [Homo sapiens]
Length = 1776
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 122/319 (38%), Positives = 172/319 (53%), Gaps = 27/319 (8%)
Query: 455 RSAILNEAVIVCSTLSFSGSALLSKLNHG-----FDVVIIDEAAQAVEPATLVPLATGCK 509
+S I+ E+ I+C TLS SG LL G F VI+DEA Q+ E TL PL C
Sbjct: 1240 QSIIILESHIICCTLSTSGGLLLESAFRGQGGVPFSCVIVDEAGQSCEIETLTPLIHRCN 1299
Query: 510 QVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQR-----------AGYPVKMLKTQYRM 558
++ LVGDP QLP TVIS A+ GY S+ R R + P+ L QYRM
Sbjct: 1300 KLILVGDPKQLPPTVISMKAQEYGYDQSMMARFCRLLEENVEHNMISRLPILQLTVQYRM 1359
Query: 559 HPEVRSFPSREFYDEALEDGSDVEDY-TTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSW 617
HP++ FPS Y+ L+ E + DW F P+ FD+ +G E + + S+
Sbjct: 1360 HPDICLFPSNYVYNRNLKTNRQTEAIRCSSDWP----FQPYLVFDVGDGSERR--DNDSY 1413
Query: 618 INIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDI 677
IN+ E+ V+ + KLI + S + II+ Y+ Q Q+ + F + VD
Sbjct: 1414 INVQEIKLVMEII-KLIKDKRKDVSFRNIGIITHYKAQKTMIQKDLDKEFDRKGPAEVD- 1471
Query: 678 TTVDGCQGREKDVAIFSCVRA-SDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLRED 736
TVD QGR+KD I +CVRA S + SIGFLA +R+NV ITRAK S+ ++G TL E+
Sbjct: 1472 -TVDAFQGRQKDCVIVTCVRANSIQGSIGFLASLQRLNVTITRAKYSLFILGHLRTLMEN 1530
Query: 737 KHWNNLVKSAEKQDCLFRV 755
+HWN L++ A+K+ + +
Sbjct: 1531 QHWNQLIQDAQKRGAIIKT 1549
>gi|395513182|ref|XP_003760808.1| PREDICTED: regulator of nonsense transcripts 1 [Sarcophilus
harrisii]
Length = 1050
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 136/424 (32%), Positives = 222/424 (52%), Gaps = 45/424 (10%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + +R+ VLVCAPSN A+D++ ++ TG+ K+VR
Sbjct: 426 PGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGL----------KVVR 475
Query: 413 IGLKAHHSVNSVA-----------IDHL-----VEQKRDD----SAADKQKHGATRKDRD 452
+ K+ +++S +D + ++Q +D+ S+AD++++ A + R
Sbjct: 476 LCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSADEKRYRALK--RT 533
Query: 453 SIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVF 512
+ R ++N VI C+ + +G L+K+ F ++IDE+ QA EP +VP+ G KQ+
Sbjct: 534 AERELLMNADVICCTCVG-AGDPRLAKMQ--FRSILIDESTQATEPECMVPVVLGAKQLI 590
Query: 513 LVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYD 572
LVGD QL V+ A G SLF+RL G L+ QYRMHP + +FPS FY+
Sbjct: 591 LVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYE 650
Query: 573 EALEDGSDVEDYTTR--DWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
+L++G D + D+ + P FF + +G+E + S++N E V +
Sbjct: 651 GSLQNGVTAADRVKKGFDFQWPQPDKPM-FFYVTQGQEEIASSGTSYLNRTEAANVEKIT 709
Query: 631 HKLISMYPQLKSSSQLAIISPYRHQVKQFQE--RFKETFGVESQKVVDITTVDGCQGREK 688
KL+ + Q+ II+PY Q + +F + + + V+I +VD QGREK
Sbjct: 710 TKLLKAGAK---PDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREK 766
Query: 689 DVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEK 748
D I SCVRA++ + IGFL D RR+NV +TRA+ +++VG L + WN+L+ ++
Sbjct: 767 DFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKE 826
Query: 749 QDCL 752
Q L
Sbjct: 827 QKVL 830
>gi|281343547|gb|EFB19131.1| hypothetical protein PANDA_000565 [Ailuropoda melanoleuca]
Length = 1122
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 136/424 (32%), Positives = 222/424 (52%), Gaps = 45/424 (10%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + +R+ VLVCAPSN A+D++ ++ TG+ K+VR
Sbjct: 498 PGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGL----------KVVR 547
Query: 413 IGLKAHHSVNSVA-----------IDHL-----VEQKRDD----SAADKQKHGATRKDRD 452
+ K+ +++S +D + ++Q +D+ S+AD++++ A + R
Sbjct: 548 LCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSADEKRYRALK--RT 605
Query: 453 SIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVF 512
+ R ++N VI C+ + +G L+K+ F ++IDE+ QA EP +VP+ G KQ+
Sbjct: 606 AERELLMNADVICCTCVG-AGDPRLAKMQ--FRSILIDESTQATEPECMVPVVLGAKQLI 662
Query: 513 LVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYD 572
LVGD QL V+ A G SLF+RL G L+ QYRMHP + +FPS FY+
Sbjct: 663 LVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYE 722
Query: 573 EALEDGSDVEDYTTR--DWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
+L++G D + D+ + P FF + +G+E + S++N E V +
Sbjct: 723 GSLQNGVTAADRVKKGFDFQWPQPDKPM-FFYVTQGQEEIASSGTSYLNRTEAANVEKIT 781
Query: 631 HKLISMYPQLKSSSQLAIISPYRHQVKQFQE--RFKETFGVESQKVVDITTVDGCQGREK 688
KL+ + Q+ II+PY Q + +F + + + V+I +VD QGREK
Sbjct: 782 TKLLKAGAK---PDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREK 838
Query: 689 DVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEK 748
D I SCVRA++ + IGFL D RR+NV +TRA+ +++VG L + WN+L+ ++
Sbjct: 839 DFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKE 898
Query: 749 QDCL 752
Q L
Sbjct: 899 QKVL 902
>gi|344241326|gb|EGV97429.1| Regulator of nonsense transcripts 1 [Cricetulus griseus]
Length = 771
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 136/424 (32%), Positives = 222/424 (52%), Gaps = 45/424 (10%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + +R+ VLVCAPSN A+D++ ++ TG+ K+VR
Sbjct: 147 PGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGL----------KVVR 196
Query: 413 IGLKAHHSVNSVA-----------IDHL-----VEQKRDD----SAADKQKHGATRKDRD 452
+ K+ +++S +D + ++Q +D+ S+AD++++ A + R
Sbjct: 197 LCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSADEKRYRALK--RT 254
Query: 453 SIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVF 512
+ R ++N VI C+ + +G L+K+ F ++IDE+ QA EP +VP+ G KQ+
Sbjct: 255 AERELLMNADVICCTCVG-AGDPRLAKMQ--FRSILIDESTQATEPECMVPVVLGAKQLI 311
Query: 513 LVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYD 572
LVGD QL V+ A G SLF+RL G L+ QYRMHP + +FPS FY+
Sbjct: 312 LVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYE 371
Query: 573 EALEDGSDVEDYTTR--DWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
+L++G D + D+ + P FF + +G+E + S++N E V +
Sbjct: 372 GSLQNGVTAADRVKKGFDFQWPQPDKPM-FFYVTQGQEEIASSGTSYLNRTEAANVEKIT 430
Query: 631 HKLISMYPQLKSSSQLAIISPYRHQVKQFQE--RFKETFGVESQKVVDITTVDGCQGREK 688
KL+ + Q+ II+PY Q + +F + + + V+I +VD QGREK
Sbjct: 431 TKLLKAGAK---PDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREK 487
Query: 689 DVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEK 748
D I SCVRA++ + IGFL D RR+NV +TRA+ +++VG L + WN+L+ ++
Sbjct: 488 DFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLSYYKE 547
Query: 749 QDCL 752
Q L
Sbjct: 548 QKAL 551
>gi|218199657|gb|EEC82084.1| hypothetical protein OsI_26082 [Oryza sativa Indica Group]
Length = 1277
Score = 196 bits (498), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 139/430 (32%), Positives = 222/430 (51%), Gaps = 55/430 (12%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + +++ + +VLVCAPSN A+D++ ++ +TG+ K+VR
Sbjct: 536 PGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISSTGL----------KVVR 585
Query: 413 IGLKAHHSVNSVAIDHL-------------------VEQKRDD----SAADKQKHGATRK 449
+ K+ +V+S ++HL ++Q +D+ S++D++K+ A ++
Sbjct: 586 LCAKSREAVSS-PVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKR 644
Query: 450 DRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCK 509
+ IL A ++C T +G L+ N F V+IDE+ QA EP L+PL G K
Sbjct: 645 ---ATEREILQSADVICCTCVGAGDPRLA--NFRFRQVLIDESTQATEPECLIPLVLGVK 699
Query: 510 QVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSRE 569
QV LVGD QL ++ A G SLF+RL G L+ QYRMHP + FPS
Sbjct: 700 QVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVILGVKPFRLQVQYRMHPCLSDFPSNC 759
Query: 570 FYDEALEDGSDVEDYTTR--DWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVL 627
FY+ L++G V + T D+ P FF + G+E A S++N E V
Sbjct: 760 FYEGTLQNGVTVNERQTPGIDFPWPVPNRPM-FFYVQMGQEEISASGTSYLNRTEAANV- 817
Query: 628 LLFHKLISMYPQLKSS---SQLAIISPYRHQVKQFQERFKETFGVESQ--KVVDITTVDG 682
K+++ + L+S SQ+ +I+PY Q + Q K +++ +VD
Sbjct: 818 ---EKIVTTF--LRSGVVPSQIGVITPYEGQRAYIVNYMSRNGSLRQQLYKEIEVASVDS 872
Query: 683 CQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNL 742
QGREKD I SCVR+++ + IGFL D RR+NV +TRA+ I+++G L + WN+L
Sbjct: 873 FQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNSL 932
Query: 743 VKSAEKQDCL 752
+ ++ +CL
Sbjct: 933 LTHYKEHECL 942
>gi|397493981|ref|XP_003817874.1| PREDICTED: regulator of nonsense transcripts 1 [Pan paniscus]
Length = 1053
Score = 196 bits (498), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 136/424 (32%), Positives = 222/424 (52%), Gaps = 45/424 (10%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + +R+ VLVCAPSN A+D++ ++ TG+ K+VR
Sbjct: 429 PGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGL----------KVVR 478
Query: 413 IGLKAHHSVNSVA-----------IDHL-----VEQKRDD----SAADKQKHGATRKDRD 452
+ K+ +++S +D + ++Q +D+ S+AD++++ A + R
Sbjct: 479 LCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSADEKRYRALK--RT 536
Query: 453 SIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVF 512
+ R ++N VI C+ + +G L+K+ F ++IDE+ QA EP +VP+ G KQ+
Sbjct: 537 AERELLMNADVICCTCVG-AGDPRLAKMQ--FRSILIDESTQATEPECMVPVVLGAKQLI 593
Query: 513 LVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYD 572
LVGD QL V+ A G SLF+RL G L+ QYRMHP + +FPS FY+
Sbjct: 594 LVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYE 653
Query: 573 EALEDGSDVEDYTTR--DWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
+L++G D + D+ + P FF + +G+E + S++N E V +
Sbjct: 654 GSLQNGVTAADRVKKGFDFQWPQPDKPM-FFYVTQGQEEIASSGTSYLNRTEAANVEKIT 712
Query: 631 HKLISMYPQLKSSSQLAIISPYRHQVKQFQE--RFKETFGVESQKVVDITTVDGCQGREK 688
KL+ + Q+ II+PY Q + +F + + + V+I +VD QGREK
Sbjct: 713 TKLLKAGAK---PDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREK 769
Query: 689 DVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEK 748
D I SCVRA++ + IGFL D RR+NV +TRA+ +++VG L + WN+L+ ++
Sbjct: 770 DFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKE 829
Query: 749 QDCL 752
Q L
Sbjct: 830 QKVL 833
>gi|115472199|ref|NP_001059698.1| Os07g0495900 [Oryza sativa Japonica Group]
gi|113611234|dbj|BAF21612.1| Os07g0495900, partial [Oryza sativa Japonica Group]
Length = 1121
Score = 196 bits (498), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 139/430 (32%), Positives = 222/430 (51%), Gaps = 55/430 (12%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + +++ + +VLVCAPSN A+D++ ++ +TG+ K+VR
Sbjct: 380 PGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISSTGL----------KVVR 429
Query: 413 IGLKAHHSVNSVAIDHL-------------------VEQKRDD----SAADKQKHGATRK 449
+ K+ +V+S ++HL ++Q +D+ S++D++K+ A ++
Sbjct: 430 LCAKSREAVSS-PVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKR 488
Query: 450 DRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCK 509
+ IL A ++C T +G L+ N F V+IDE+ QA EP L+PL G K
Sbjct: 489 ---ATEREILQSADVICCTCVGAGDPRLA--NFRFRQVLIDESTQATEPECLIPLVLGVK 543
Query: 510 QVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSRE 569
QV LVGD QL ++ A G SLF+RL G L+ QYRMHP + FPS
Sbjct: 544 QVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVILGVKPFRLQVQYRMHPCLSDFPSNC 603
Query: 570 FYDEALEDGSDVEDYTTR--DWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVL 627
FY+ L++G V + T D+ P FF + G+E A S++N E V
Sbjct: 604 FYEGTLQNGVTVNERQTPGIDFPWPVPNRPM-FFYVQMGQEEISASGTSYLNRTEAANV- 661
Query: 628 LLFHKLISMYPQLKSS---SQLAIISPYRHQVKQFQERFKETFGVESQ--KVVDITTVDG 682
K+++ + L+S SQ+ +I+PY Q + Q K +++ +VD
Sbjct: 662 ---EKIVTTF--LRSGVVPSQIGVITPYEGQRAYIVNYMSRNGSLRQQLYKEIEVASVDS 716
Query: 683 CQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNL 742
QGREKD I SCVR+++ + IGFL D RR+NV +TRA+ I+++G L + WN+L
Sbjct: 717 FQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNSL 776
Query: 743 VKSAEKQDCL 752
+ ++ +CL
Sbjct: 777 LTHYKEHECL 786
>gi|358371937|dbj|GAA88543.1| regulator of nonsense transcripts [Aspergillus kawachii IFO 4308]
Length = 1072
Score = 196 bits (498), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 139/441 (31%), Positives = 218/441 (49%), Gaps = 38/441 (8%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR--IGLKAHHS---VNSVAID-- 427
+VLVCAPSN A+D++ R+ TG++ + + + + V +G + H +N I+
Sbjct: 464 QVLVCAPSNVAVDQLCERIHRTGLKTVRVTAKSREDVESPVGFLSLHEQVRINDTNIELI 523
Query: 428 HLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVV 487
L + K + Q ++ S ILN A ++C T +G L+KL F V
Sbjct: 524 KLNQLKAELGELSSQDEKRLKQLTRSAEREILNNADVICCTCVGAGDPRLAKLK--FRTV 581
Query: 488 IIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGY 547
+IDE+ Q+ EP ++PL GCKQV LVGD QL +++ A G SLF+RL G
Sbjct: 582 LIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVILGC 641
Query: 548 PVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRD----WHEYRCFGPFSFFDI 603
L QYRMHP + FPS FY+ +L++G + RD W P F+
Sbjct: 642 SPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGISSFERLRRDVDFPWPIAD--NPMMFWS- 698
Query: 604 HEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQ-LAIISPYRHQVKQFQER 662
+ G E A S++N E V K+++ + + Q + II+PY Q
Sbjct: 699 NLGNEEISASGTSYLNRTEATNV----EKIVTRFFKAGVQPQDIGIITPYEGQRSYIVSS 754
Query: 663 FKE--TFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRA 720
+ TF E K +++ +VD QGREKD I SCVR++D + IGFL+D RR+NV +TRA
Sbjct: 755 MQANGTFKKEHYKEIEVASVDAFQGREKDFIILSCVRSNDHQGIGFLSDPRRLNVALTRA 814
Query: 721 KSSILVVGCASTLREDKHWNNLVKSAEKQDC------------LFRVSKPYASFFSDENL 768
K + ++G L + WN L++ +++ C L + S+P ++ +
Sbjct: 815 KYGLAILGNPKVLSKHPLWNCLLQHFKERHCLVEGPLSNLQESLIQFSRPKQAYRGPQRF 874
Query: 769 E---SMRKNATTDNVQGADGH 786
+ + N T+ + G +GH
Sbjct: 875 QMAYNHASNVTSGLMNGRNGH 895
>gi|242045720|ref|XP_002460731.1| hypothetical protein SORBIDRAFT_02g033940 [Sorghum bicolor]
gi|241924108|gb|EER97252.1| hypothetical protein SORBIDRAFT_02g033940 [Sorghum bicolor]
Length = 1269
Score = 196 bits (498), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 139/430 (32%), Positives = 222/430 (51%), Gaps = 55/430 (12%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + +++ + +VLVCAPSN A+D++ ++ +TG+ K+VR
Sbjct: 530 PGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISSTGL----------KVVR 579
Query: 413 IGLKAHHSVNSVAIDHL-------------------VEQKRDD----SAADKQKHGATRK 449
+ K+ +V+S ++HL ++Q +D+ S++D++K+ A ++
Sbjct: 580 LCAKSREAVSS-PVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKR 638
Query: 450 DRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCK 509
+ IL A ++C T +G LS N F V+IDE+ QA EP L+PL G K
Sbjct: 639 ---ATEREILQSADVICCTCVGAGDPRLS--NFRFRQVLIDESTQATEPECLIPLVLGVK 693
Query: 510 QVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSRE 569
QV LVGD QL ++ A G SLF+RL G L+ QYRMHP + FPS
Sbjct: 694 QVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVILGVKPFRLQVQYRMHPCLSEFPSNC 753
Query: 570 FYDEALEDGSDVEDYTTR--DWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVL 627
FY+ L++G V + + D+ P FF + G+E A S++N E V
Sbjct: 754 FYEGTLQNGVTVNERQSSGIDFPWPVPNRPM-FFYVQMGQEEISASGTSYLNRTEAANV- 811
Query: 628 LLFHKLISMYPQLKSS---SQLAIISPYRHQVKQFQERFKETFGVESQ--KVVDITTVDG 682
K+++ + L+S SQ+ +I+PY Q + Q K +++ +VD
Sbjct: 812 ---EKIVTTF--LRSGVVPSQIGVITPYEGQRAYIVNYMSRNGSLRQQLYKEIEVASVDS 866
Query: 683 CQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNL 742
QGREKD I SCVR+++ + IGFL D RR+NV +TRA+ I+++G L + WN+L
Sbjct: 867 FQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNSL 926
Query: 743 VKSAEKQDCL 752
+ ++ +CL
Sbjct: 927 LTHYKEHECL 936
>gi|194223788|ref|XP_001915294.1| PREDICTED: regulator of nonsense transcripts 1 [Equus caballus]
Length = 1079
Score = 196 bits (498), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 136/424 (32%), Positives = 222/424 (52%), Gaps = 45/424 (10%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + +R+ VLVCAPSN A+D++ ++ TG+ K+VR
Sbjct: 455 PGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGL----------KVVR 504
Query: 413 IGLKAHHSVNSVA-----------IDHL-----VEQKRDD----SAADKQKHGATRKDRD 452
+ K+ +++S +D + ++Q +D+ S+AD++++ A + R
Sbjct: 505 LCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSADEKRYRALK--RT 562
Query: 453 SIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVF 512
+ R ++N VI C+ + +G L+K+ F ++IDE+ QA EP +VP+ G KQ+
Sbjct: 563 AERELLMNADVICCTCVG-AGDPRLAKMQ--FRSILIDESTQATEPECMVPVVLGAKQLI 619
Query: 513 LVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYD 572
LVGD QL V+ A G SLF+RL G L+ QYRMHP + +FPS FY+
Sbjct: 620 LVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYE 679
Query: 573 EALEDGSDVEDYTTR--DWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
+L++G D + D+ + P FF + +G+E + S++N E V +
Sbjct: 680 GSLQNGVTAADRVKKGFDFQWPQPDKPM-FFYVTQGQEEIASSGTSYLNRTEAANVEKIT 738
Query: 631 HKLISMYPQLKSSSQLAIISPYRHQVKQFQE--RFKETFGVESQKVVDITTVDGCQGREK 688
KL+ + Q+ II+PY Q + +F + + + V+I +VD QGREK
Sbjct: 739 TKLLKAGAK---PDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREK 795
Query: 689 DVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEK 748
D I SCVRA++ + IGFL D RR+NV +TRA+ +++VG L + WN+L+ ++
Sbjct: 796 DFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKE 855
Query: 749 QDCL 752
Q L
Sbjct: 856 QKVL 859
>gi|148223321|ref|NP_001085862.1| MGC80941 protein [Xenopus laevis]
gi|49116641|gb|AAH73441.1| MGC80941 protein [Xenopus laevis]
Length = 1098
Score = 196 bits (498), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 134/424 (31%), Positives = 218/424 (51%), Gaps = 45/424 (10%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + +R+ VLVCAPSN A+D++ ++ TG+ K+VR
Sbjct: 473 PGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGL----------KVVR 522
Query: 413 IGLKAHHSVNSVA--------------------IDHLVEQKRDDSAADKQKHGATRKDRD 452
+ K+ +++S + L ++ + S+AD++++ A + R
Sbjct: 523 LCAKSREAIDSPVSFLALHNQIRNMESMPELQKLQQLKDETGELSSADEKRYRALK--RT 580
Query: 453 SIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVF 512
+ R ++N VI C+ + +G L+K+ F ++IDE+ QA EP +VP+ G KQ+
Sbjct: 581 AERELLMNADVICCTCVG-AGDPRLAKMQ--FRSILIDESTQATEPECMVPVVLGAKQLI 637
Query: 513 LVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYD 572
LVGD QL V+ A G SLF+RL G L+ QYRMHP + +FPS FY+
Sbjct: 638 LVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYE 697
Query: 573 EALEDGSDVEDYTTR--DWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
+L++G D + D+ + P FF + +G+E + S++N E V +
Sbjct: 698 GSLQNGVTAADRVKKGFDFQWPQPDKPM-FFYVTQGQEEIASSGTSYLNRTEAANVEKIT 756
Query: 631 HKLISMYPQLKSSSQLAIISPYRHQVKQFQE--RFKETFGVESQKVVDITTVDGCQGREK 688
KL+ + Q+ II+PY Q + +F + + + V+I +VD QGREK
Sbjct: 757 TKLLKAGAK---PDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREK 813
Query: 689 DVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEK 748
D I SCVRA++ + IGFL D RR+NV +TRA+ +++VG L + WN+L+ ++
Sbjct: 814 DFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKE 873
Query: 749 QDCL 752
Q L
Sbjct: 874 QKVL 877
>gi|387017334|gb|AFJ50785.1| Regulator of nonsense transcripts 1-like [Crotalus adamanteus]
Length = 1131
Score = 196 bits (498), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 136/424 (32%), Positives = 222/424 (52%), Gaps = 45/424 (10%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + +R+ VLVCAPSN A+D++ ++ TG+ K+VR
Sbjct: 508 PGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGL----------KVVR 557
Query: 413 IGLKAHHSVNSVA-----------IDHL-----VEQKRDD----SAADKQKHGATRKDRD 452
+ K+ +++S +D + ++Q +D+ S+AD++++ A + R
Sbjct: 558 LCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSADEKRYRALK--RT 615
Query: 453 SIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVF 512
+ R ++N VI C+ + +G L+K+ F ++IDE+ QA EP +VP+ G KQ+
Sbjct: 616 AERELLMNADVICCTCVG-AGDPRLAKMQ--FRSILIDESTQATEPECMVPVVLGAKQLI 672
Query: 513 LVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYD 572
LVGD QL V+ A G SLF+RL G L+ QYRMHP + +FPS FY+
Sbjct: 673 LVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYE 732
Query: 573 EALEDGSDVEDYTTR--DWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
+L++G D + D+ + P FF + +G+E + S++N E V +
Sbjct: 733 GSLQNGVTAADRVKKGFDFQWPQPDKPM-FFYVTQGQEEIASSGTSYLNRTEAANVEKIT 791
Query: 631 HKLISMYPQLKSSSQLAIISPYRHQVKQFQE--RFKETFGVESQKVVDITTVDGCQGREK 688
KL+ + Q+ II+PY Q + +F + + + V+I +VD QGREK
Sbjct: 792 TKLLKAGAK---PDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREK 848
Query: 689 DVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEK 748
D I SCVRA++ + IGFL D RR+NV +TRA+ +++VG L + WN+L+ ++
Sbjct: 849 DFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKE 908
Query: 749 QDCL 752
Q L
Sbjct: 909 QKVL 912
>gi|355703337|gb|EHH29828.1| hypothetical protein EGK_10343, partial [Macaca mulatta]
Length = 1053
Score = 196 bits (498), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 136/424 (32%), Positives = 222/424 (52%), Gaps = 45/424 (10%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + +R+ VLVCAPSN A+D++ ++ TG+ K+VR
Sbjct: 429 PGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGL----------KVVR 478
Query: 413 IGLKAHHSVNSVA-----------IDHL-----VEQKRDD----SAADKQKHGATRKDRD 452
+ K+ +++S +D + ++Q +D+ S+AD++++ A + R
Sbjct: 479 LCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSADEKRYRALK--RT 536
Query: 453 SIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVF 512
+ R ++N VI C+ + +G L+K+ F ++IDE+ QA EP +VP+ G KQ+
Sbjct: 537 AERELLMNADVICCTCVG-AGDPRLAKMQ--FRSILIDESTQATEPECMVPVVLGAKQLI 593
Query: 513 LVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYD 572
LVGD QL V+ A G SLF+RL G L+ QYRMHP + +FPS FY+
Sbjct: 594 LVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYE 653
Query: 573 EALEDGSDVEDYTTR--DWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
+L++G D + D+ + P FF + +G+E + S++N E V +
Sbjct: 654 GSLQNGVTAADRVKKGFDFQWPQPDKPM-FFYVTQGQEEIASSGTSYLNRTEAANVEKIT 712
Query: 631 HKLISMYPQLKSSSQLAIISPYRHQVKQFQE--RFKETFGVESQKVVDITTVDGCQGREK 688
KL+ + Q+ II+PY Q + +F + + + V+I +VD QGREK
Sbjct: 713 TKLLKAGAK---PDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREK 769
Query: 689 DVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEK 748
D I SCVRA++ + IGFL D RR+NV +TRA+ +++VG L + WN+L+ ++
Sbjct: 770 DFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKE 829
Query: 749 QDCL 752
Q L
Sbjct: 830 QKVL 833
>gi|444726614|gb|ELW67138.1| Regulator of nonsense transcripts 1 [Tupaia chinensis]
Length = 1000
Score = 196 bits (498), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 136/424 (32%), Positives = 222/424 (52%), Gaps = 45/424 (10%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + +R+ VLVCAPSN A+D++ ++ TG+ K+VR
Sbjct: 452 PGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGL----------KVVR 501
Query: 413 IGLKAHHSVNSVA-----------IDHL-----VEQKRDD----SAADKQKHGATRKDRD 452
+ K+ +++S +D + ++Q +D+ S+AD++++ A + R
Sbjct: 502 LCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSADEKRYRALK--RT 559
Query: 453 SIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVF 512
+ R ++N VI C+ + +G L+K+ F ++IDE+ QA EP +VP+ G KQ+
Sbjct: 560 AERELLMNADVICCTCVG-AGDPRLAKMQ--FRSILIDESTQATEPECMVPVVLGAKQLI 616
Query: 513 LVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYD 572
LVGD QL V+ A G SLF+RL G L+ QYRMHP + +FPS FY+
Sbjct: 617 LVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYE 676
Query: 573 EALEDGSDVEDYTTR--DWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
+L++G D + D+ + P FF + +G+E + S++N E V +
Sbjct: 677 GSLQNGVTAADRVKKGFDFQWPQPDKPM-FFYVTQGQEEIASSGTSYLNRTEAANVEKIT 735
Query: 631 HKLISMYPQLKSSSQLAIISPYRHQVKQFQE--RFKETFGVESQKVVDITTVDGCQGREK 688
KL+ + Q+ II+PY Q + +F + + + V+I +VD QGREK
Sbjct: 736 TKLLKAGAK---PDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREK 792
Query: 689 DVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEK 748
D I SCVRA++ + IGFL D RR+NV +TRA+ +++VG L + WN+L+ ++
Sbjct: 793 DFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKE 852
Query: 749 QDCL 752
Q L
Sbjct: 853 QKVL 856
>gi|114325426|gb|AAH32622.2| SETX protein [Homo sapiens]
Length = 1030
Score = 196 bits (498), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 126/348 (36%), Positives = 186/348 (53%), Gaps = 31/348 (8%)
Query: 426 IDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHG-- 483
I + +++++ ++ K+ G +K +S I+ E+ I+C TLS SG LL G
Sbjct: 469 ISKVSKERQELASKIKEVQGRPQK----TQSIIILESHIICCTLSTSGGLLLESAFRGQG 524
Query: 484 ---FDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFK 540
F VI+DEA Q+ E TL PL C ++ LVGDP QLP TVIS A+ GY S+
Sbjct: 525 GVPFSCVIVDEAGQSCEIETLTPLIHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMA 584
Query: 541 RLQR-----------AGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDY-TTRD 588
R R + P+ L QYRMHP++ FPS Y+ L+ E + D
Sbjct: 585 RFCRLLEENVEHNMISRLPILQLTVQYRMHPDICLFPSNYVYNRNLKTNRQTEAIRCSSD 644
Query: 589 WHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAI 648
W F P+ FD+ +G E + + S+IN+ E+ V+ + KLI + S + I
Sbjct: 645 WP----FQPYLVFDVGDGSERR--DNDSYINVQEIKLVMEII-KLIKDKRKDVSFRNIGI 697
Query: 649 ISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRA-SDKKSIGFL 707
I+ Y+ Q Q+ + F + VD TVD QGR+KD I +CVRA S + SIGFL
Sbjct: 698 ITHYKAQKTMIQKDLDKEFDRKGPAEVD--TVDAFQGRQKDCVIVTCVRANSIQGSIGFL 755
Query: 708 ADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRV 755
A +R+NV ITRAK S+ ++G TL E++HWN L++ A+K+ + +
Sbjct: 756 ASLQRLNVTITRAKYSLFILGHLRTLMENQHWNQLIQDAQKRGAIIKT 803
>gi|426387932|ref|XP_004060416.1| PREDICTED: regulator of nonsense transcripts 1 [Gorilla gorilla
gorilla]
Length = 1055
Score = 196 bits (498), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 136/424 (32%), Positives = 222/424 (52%), Gaps = 45/424 (10%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + +R+ VLVCAPSN A+D++ ++ TG+ K+VR
Sbjct: 431 PGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGL----------KVVR 480
Query: 413 IGLKAHHSVNSVA-----------IDHL-----VEQKRDD----SAADKQKHGATRKDRD 452
+ K+ +++S +D + ++Q +D+ S+AD++++ A + R
Sbjct: 481 LCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSADEKRYRALK--RT 538
Query: 453 SIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVF 512
+ R ++N VI C+ + +G L+K+ F ++IDE+ QA EP +VP+ G KQ+
Sbjct: 539 AERELLMNADVICCTCVG-AGDPRLAKMQ--FRSILIDESTQATEPECMVPVVLGAKQLI 595
Query: 513 LVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYD 572
LVGD QL V+ A G SLF+RL G L+ QYRMHP + +FPS FY+
Sbjct: 596 LVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYE 655
Query: 573 EALEDGSDVEDYTTR--DWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
+L++G D + D+ + P FF + +G+E + S++N E V +
Sbjct: 656 GSLQNGVTAADRVKKGFDFQWPQPDKPM-FFYVTQGQEEIASSGTSYLNRTEAANVEKIT 714
Query: 631 HKLISMYPQLKSSSQLAIISPYRHQVKQFQE--RFKETFGVESQKVVDITTVDGCQGREK 688
KL+ + Q+ II+PY Q + +F + + + V+I +VD QGREK
Sbjct: 715 TKLLKAGAK---PDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREK 771
Query: 689 DVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEK 748
D I SCVRA++ + IGFL D RR+NV +TRA+ +++VG L + WN+L+ ++
Sbjct: 772 DFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKE 831
Query: 749 QDCL 752
Q L
Sbjct: 832 QKVL 835
>gi|109467976|ref|XP_342401.3| PREDICTED: probable helicase senataxin-like [Rattus norvegicus]
Length = 2647
Score = 196 bits (497), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 148/465 (31%), Positives = 217/465 (46%), Gaps = 94/465 (20%)
Query: 375 RVLVCAPSNSALDEIVLRLL---------------NTG----IRDENIRSYTPKIVRIGL 415
RVLVCAPSN+A+DE++ +++ N G +R +S ++++ L
Sbjct: 1979 RVLVCAPSNAAVDELMKKIILEFKEKCKDKKNPLGNCGDINLVRLGPEKSINTEVLKFSL 2038
Query: 416 KAH--HSVNSVAIDHLVEQKRDDSAADKQKHGATR------------------------K 449
+ H + H+ E R D Q +R K
Sbjct: 2039 DSQVSHRMKKDLPSHIQEMLRRKEILDAQLDELSRQRALCRGGREMQRQELDEHIVIVSK 2098
Query: 450 DRDSIRS--------------AILNEAVIVCSTLSFSGSALLSKLNHG-----FDVVIID 490
+R + S I+ E+ ++C TLS SG LL G F VI+D
Sbjct: 2099 ERQELASKIKEVQGRPQRAQNTIILESHVICCTLSTSGGLLLESAFRGQGGVPFSCVIVD 2158
Query: 491 EAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQR------ 544
EA Q+ E TL PL C ++ LVGDP QLP TVIS A+ GY S+ R +
Sbjct: 2159 EAGQSCEVETLSPLIHRCNKLVLVGDPKQLPPTVISMKAQEYGYDQSMMARFCKLLEENV 2218
Query: 545 -----AGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRC----- 594
PV L QYRMHP++ FPS Y++ L+ T R RC
Sbjct: 2219 EQNMIGRLPVLQLTIQYRMHPDICLFPSNYVYNKNLK--------TNRLTETIRCSSEWP 2270
Query: 595 FGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRH 654
F P+ FD+ +G E + + S+IN+ E+ V+ + KLI + S + II+ Y+
Sbjct: 2271 FQPYLVFDVGDGSEQR--DNDSYINVQEIKLVMEII-KLIKEKRKDISFRNIGIITHYKA 2327
Query: 655 QVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASD-KKSIGFLADYRRM 713
Q Q+ ++ F + VD TVD QGR+KD I +CVRAS + SIGFLA +R+
Sbjct: 2328 QKTMIQKDLEKEFDKKGPAEVD--TVDAFQGRQKDCIIVTCVRASAVQGSIGFLASLQRL 2385
Query: 714 NVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRVSKP 758
NV ITRAK S+ ++G TL E++HW L++ A+K+ + + P
Sbjct: 2386 NVTITRAKYSLFILGHLRTLMENQHWYELIQDAQKRGAIIKTCDP 2430
Score = 40.4 bits (93), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 126/320 (39%), Gaps = 56/320 (17%)
Query: 13 SIF-RFCKIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPL 71
SIF F K +L W Y + DK + R V ++D +Y F PL
Sbjct: 1678 SIFDTFIKEVLKWKYQMFLN-----FDKCGAPTSLCQSISRPVPVRFQDCAEYFNVFLPL 1732
Query: 72 L----FEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADEVESISP--ND 125
+ FE V + + ++E + LR + E++ + + P ND
Sbjct: 1733 IILNAFETVAQEWLNSPNKENFYQLHLR-KFPADYKKYWEFLIYLEESELAKQLHPKEND 1791
Query: 126 LLLLSKEE-------FKEGSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQ 178
L+ L E+ ++ S + Y + +++R I + S
Sbjct: 1792 LVFLVPEKKYMDRHSVQDRSHYYCGYVHKFR---RTSVMRSGKTECSLCIQTQDNMPASV 1848
Query: 179 RLLNIHSLITSSVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPF----KDLILSASEK 234
+ L ++ SS+ +++L ++ + S R LA + P KDL+ + SE+
Sbjct: 1849 KELT-KCIVISSLVTTQRKLKAMSLLS----GRNQLARAVLNPNPMDFCTKDLLTTTSER 1903
Query: 235 SSGSQDQSWKIPGLLHEYIKENHNASQLEAI--------HEGLLRKAFVLIQGPPGTGKT 286
+ Y+K + N Q +AI H + K LI GPPGTGK+
Sbjct: 1904 --------------IIAYLK-DFNEDQKKAIETAYAMVKHSPSVAK-ICLIHGPPGTGKS 1947
Query: 287 QTILGLLSAILHATPARVHS 306
+TI+GLL +L + + HS
Sbjct: 1948 KTIVGLLYRLLTESQRKGHS 1967
>gi|169763354|ref|XP_001727577.1| regulator of nonsense transcripts 1 [Aspergillus oryzae RIB40]
gi|238489245|ref|XP_002375860.1| regulator of nonsense transcripts, putative [Aspergillus flavus
NRRL3357]
gi|83770605|dbj|BAE60738.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220698248|gb|EED54588.1| regulator of nonsense transcripts, putative [Aspergillus flavus
NRRL3357]
gi|391869636|gb|EIT78831.1| RNA helicase nonsense mRNA reducing factor [Aspergillus oryzae
3.042]
Length = 1072
Score = 196 bits (497), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 152/480 (31%), Positives = 229/480 (47%), Gaps = 75/480 (15%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNS-VAIDHLVEQK 433
+VLVCAPSN A+D++ R+ TG+ K VR+ K+ V S V L EQ
Sbjct: 464 QVLVCAPSNVAVDQLCERIHRTGL----------KTVRVTAKSREDVESPVGFLSLHEQV 513
Query: 434 R-DDSAADKQKHGATRKD------------RDSIRSA---ILNEAVIVCSTLSFSGSALL 477
R +DS + K + + + RSA ILN A ++C T +G L
Sbjct: 514 RLNDSNIELLKLNQLKAELGELSSQDEKRLKQLTRSAEREILNNADVICCTCVGAGDPRL 573
Query: 478 SKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTS 537
+KL F V+IDE+ Q+ EP ++PL GCKQV LVGD QL +++ A G S
Sbjct: 574 AKLK--FRTVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQS 631
Query: 538 LFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRD----WHEYR 593
LF+RL G L QYRMHP + FPS FY+ +L++G + RD W
Sbjct: 632 LFERLVILGCSPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGISSIERLRRDVDFPWPISD 691
Query: 594 CFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQ---LAIIS 650
P F+ + G E A S++N E V K+++ + K+ Q + II+
Sbjct: 692 --NPMMFWS-NLGNEEISASGTSYLNRTEATNV----EKIVTRF--FKAGVQPGDIGIIT 742
Query: 651 PYRHQVKQFQERFKE--TFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLA 708
PY Q + TF E K +++ +VD QGREKD I SCVR++D + IGFL+
Sbjct: 743 PYEGQRSYIVSSMQATGTFKKEHYKEIEVASVDAFQGREKDFIILSCVRSNDHQGIGFLS 802
Query: 709 DYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDC------------LFRVS 756
D RR+NV +TRAK + ++G L + WN L++ +++ C L + S
Sbjct: 803 DPRRLNVALTRAKYGLAILGNPKVLSKHPLWNCLLQHFKERHCLVEGPLSNLQESLIQFS 862
Query: 757 KPYASFFSDENLESMRKNA---TTDNVQGADGH-------------VPHDDETMHYANTG 800
+P ++ + + +A T+ + G +GH +P D ++H + G
Sbjct: 863 RPKQAYRGPQRFQMAYNHASSVTSGMMNGKNGHRNDFHDTGSVVGYIPDDVSSVHSSALG 922
>gi|354473860|ref|XP_003499150.1| PREDICTED: regulator of nonsense transcripts 1-like [Cricetulus
griseus]
Length = 1061
Score = 196 bits (497), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 136/424 (32%), Positives = 222/424 (52%), Gaps = 45/424 (10%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + +R+ VLVCAPSN A+D++ ++ TG+ K+VR
Sbjct: 437 PGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGL----------KVVR 486
Query: 413 IGLKAHHSVNSVA-----------IDHL-----VEQKRDD----SAADKQKHGATRKDRD 452
+ K+ +++S +D + ++Q +D+ S+AD++++ A + R
Sbjct: 487 LCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSADEKRYRALK--RT 544
Query: 453 SIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVF 512
+ R ++N VI C+ + +G L+K+ F ++IDE+ QA EP +VP+ G KQ+
Sbjct: 545 AERELLMNADVICCTCVG-AGDPRLAKMQ--FRSILIDESTQATEPECMVPVVLGAKQLI 601
Query: 513 LVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYD 572
LVGD QL V+ A G SLF+RL G L+ QYRMHP + +FPS FY+
Sbjct: 602 LVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYE 661
Query: 573 EALEDGSDVEDYTTR--DWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
+L++G D + D+ + P FF + +G+E + S++N E V +
Sbjct: 662 GSLQNGVTAADRVKKGFDFQWPQPDKPM-FFYVTQGQEEIASSGTSYLNRTEAANVEKIT 720
Query: 631 HKLISMYPQLKSSSQLAIISPYRHQVKQFQE--RFKETFGVESQKVVDITTVDGCQGREK 688
KL+ + Q+ II+PY Q + +F + + + V+I +VD QGREK
Sbjct: 721 TKLLKAGAK---PDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREK 777
Query: 689 DVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEK 748
D I SCVRA++ + IGFL D RR+NV +TRA+ +++VG L + WN+L+ ++
Sbjct: 778 DFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLSYYKE 837
Query: 749 QDCL 752
Q L
Sbjct: 838 QKAL 841
>gi|189207819|ref|XP_001940243.1| DNA-binding protein SMUBP-2 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187976336|gb|EDU42962.1| DNA-binding protein SMUBP-2 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 1079
Score = 196 bits (497), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 133/394 (33%), Positives = 207/394 (52%), Gaps = 27/394 (6%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR--IG-LKAHHSV----NSVAID 427
+VLVCAPSN A+D++ R+ TG++ + + + + V +G L H V +V ++
Sbjct: 485 QVLVCAPSNVAVDQLCERIHLTGLKTVRVTAKSREDVESPVGFLSLHEQVRMNDTNVELN 544
Query: 428 HLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVV 487
L + K D Q ++ + IL A ++C T +G LSK+ F V
Sbjct: 545 KLNQLKSDVGELSSQDEKKFKQLTRAAEREILMAADVICCTCVGAGDPRLSKMK--FRTV 602
Query: 488 IIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGY 547
+IDE+ Q+ EP ++PL GCKQV LVGD QL +++ A G SLF+RL G
Sbjct: 603 LIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAATAGLNQSLFERLVILGC 662
Query: 548 PVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRD----WHEYRCFGPFSFFDI 603
L+ QYRMHP + FPS FY+ +L++G +++ RD W P F+
Sbjct: 663 SPIRLQVQYRMHPCLSEFPSNMFYEGSLQNGVTMQERIRRDVDFPWPVVD--SPMMFWS- 719
Query: 604 HEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQ---LAIISPYRHQVKQFQ 660
+ G E A S++N E V K+++ + K+ Q + II+PY Q
Sbjct: 720 NLGAEEISASGTSYLNRTEAQNV----EKIVTRF--FKAGVQPGDIGIITPYEGQRSYVV 773
Query: 661 ERFKET--FGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGIT 718
+ T F E+ K V++ +VD QGREKD I SCVR++D + IGFL+D RR+NV +T
Sbjct: 774 SSMQATGSFKKENYKEVEVASVDAFQGREKDFIILSCVRSNDHQGIGFLSDPRRLNVALT 833
Query: 719 RAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
RAK ++++G L + W+ L+ ++++CL
Sbjct: 834 RAKYGLVILGNPKVLSKHPLWHYLLLHFKERNCL 867
>gi|296233329|ref|XP_002761973.1| PREDICTED: regulator of nonsense transcripts 1, partial [Callithrix
jacchus]
Length = 1164
Score = 196 bits (497), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 136/424 (32%), Positives = 222/424 (52%), Gaps = 45/424 (10%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + +R+ VLVCAPSN A+D++ ++ TG+ K+VR
Sbjct: 540 PGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGL----------KVVR 589
Query: 413 IGLKAHHSVNSVA-----------IDHL-----VEQKRDD----SAADKQKHGATRKDRD 452
+ K+ +++S +D + ++Q +D+ S+AD++++ A + R
Sbjct: 590 LCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSADEKRYRALK--RT 647
Query: 453 SIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVF 512
+ R ++N VI C+ + +G L+K+ F ++IDE+ QA EP +VP+ G KQ+
Sbjct: 648 AERELLMNADVICCTCVG-AGDPRLAKMQ--FRSILIDESTQATEPECMVPVVLGAKQLI 704
Query: 513 LVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYD 572
LVGD QL V+ A G SLF+RL G L+ QYRMHP + +FPS FY+
Sbjct: 705 LVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYE 764
Query: 573 EALEDGSDVEDYTTR--DWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
+L++G D + D+ + P FF + +G+E + S++N E V +
Sbjct: 765 GSLQNGVTAADRVKKGFDFQWPQPDKPM-FFYVTQGQEEIASSGTSYLNRTEAANVEKIT 823
Query: 631 HKLISMYPQLKSSSQLAIISPYRHQVKQFQE--RFKETFGVESQKVVDITTVDGCQGREK 688
KL+ + Q+ II+PY Q + +F + + + V+I +VD QGREK
Sbjct: 824 TKLLKAGAK---PDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREK 880
Query: 689 DVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEK 748
D I SCVRA++ + IGFL D RR+NV +TRA+ +++VG L + WN+L+ ++
Sbjct: 881 DFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKE 940
Query: 749 QDCL 752
Q L
Sbjct: 941 QKVL 944
>gi|441628692|ref|XP_004089387.1| PREDICTED: LOW QUALITY PROTEIN: regulator of nonsense transcripts 1
[Nomascus leucogenys]
Length = 1163
Score = 196 bits (497), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 136/424 (32%), Positives = 222/424 (52%), Gaps = 45/424 (10%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + +R+ VLVCAPSN A+D++ ++ TG+ K+VR
Sbjct: 539 PGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGL----------KVVR 588
Query: 413 IGLKAHHSVNSVA-----------IDHL-----VEQKRDD----SAADKQKHGATRKDRD 452
+ K+ +++S +D + ++Q +D+ S+AD++++ A + R
Sbjct: 589 LCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSADEKRYRALK--RT 646
Query: 453 SIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVF 512
+ R ++N VI C+ + +G L+K+ F ++IDE+ QA EP +VP+ G KQ+
Sbjct: 647 AERELLMNADVICCTCVG-AGDPRLAKMQ--FRSILIDESTQATEPECMVPVVLGAKQLI 703
Query: 513 LVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYD 572
LVGD QL V+ A G SLF+RL G L+ QYRMHP + +FPS FY+
Sbjct: 704 LVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYE 763
Query: 573 EALEDGSDVEDYTTR--DWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
+L++G D + D+ + P FF + +G+E + S++N E V +
Sbjct: 764 GSLQNGVTAADRVKKGFDFQWPQPDKPM-FFYVTQGQEEIASSGTSYLNRTEAANVEKIT 822
Query: 631 HKLISMYPQLKSSSQLAIISPYRHQVKQFQE--RFKETFGVESQKVVDITTVDGCQGREK 688
KL+ + Q+ II+PY Q + +F + + + V+I +VD QGREK
Sbjct: 823 TKLLKAGAK---PDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREK 879
Query: 689 DVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEK 748
D I SCVRA++ + IGFL D RR+NV +TRA+ +++VG L + WN+L+ ++
Sbjct: 880 DFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKE 939
Query: 749 QDCL 752
Q L
Sbjct: 940 QKVL 943
>gi|293345814|ref|XP_002726125.1| PREDICTED: probable helicase senataxin-like [Rattus norvegicus]
Length = 2647
Score = 196 bits (497), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 148/465 (31%), Positives = 217/465 (46%), Gaps = 94/465 (20%)
Query: 375 RVLVCAPSNSALDEIVLRLL---------------NTG----IRDENIRSYTPKIVRIGL 415
RVLVCAPSN+A+DE++ +++ N G +R +S ++++ L
Sbjct: 1979 RVLVCAPSNAAVDELMKKIILEFKEKCKDKKNPLGNCGDINLVRLGPEKSINTEVLKFSL 2038
Query: 416 KAH--HSVNSVAIDHLVEQKRDDSAADKQKHGATR------------------------K 449
+ H + H+ E R D Q +R K
Sbjct: 2039 DSQVSHRMKKDLPSHIQEMLRRKEILDAQLDELSRQRALCRGGREMQRQELDEHIVIVSK 2098
Query: 450 DRDSIRS--------------AILNEAVIVCSTLSFSGSALLSKLNHG-----FDVVIID 490
+R + S I+ E+ ++C TLS SG LL G F VI+D
Sbjct: 2099 ERQELASKIKEVQGRPQRAQNTIILESHVICCTLSTSGGLLLESAFRGQGGVPFSCVIVD 2158
Query: 491 EAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQR------ 544
EA Q+ E TL PL C ++ LVGDP QLP TVIS A+ GY S+ R +
Sbjct: 2159 EAGQSCEVETLSPLIHRCNKLVLVGDPKQLPPTVISMKAQEYGYDQSMMARFCKLLEENV 2218
Query: 545 -----AGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRC----- 594
PV L QYRMHP++ FPS Y++ L+ T R RC
Sbjct: 2219 EQNMIGRLPVLQLTIQYRMHPDICLFPSNYVYNKNLK--------TNRLTETIRCSSEWP 2270
Query: 595 FGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRH 654
F P+ FD+ +G E + + S+IN+ E+ V+ + KLI + S + II+ Y+
Sbjct: 2271 FQPYLVFDVGDGSEQR--DNDSYINVQEIKLVMEII-KLIKEKRKDISFRNIGIITHYKA 2327
Query: 655 QVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASD-KKSIGFLADYRRM 713
Q Q+ ++ F + VD TVD QGR+KD I +CVRAS + SIGFLA +R+
Sbjct: 2328 QKTMIQKDLEKEFDKKGPAEVD--TVDAFQGRQKDCIIVTCVRASAVQGSIGFLASLQRL 2385
Query: 714 NVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRVSKP 758
NV ITRAK S+ ++G TL E++HW L++ A+K+ + + P
Sbjct: 2386 NVTITRAKYSLFILGHLRTLMENQHWYELIQDAQKRGAIIKTCDP 2430
Score = 40.4 bits (93), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 126/320 (39%), Gaps = 56/320 (17%)
Query: 13 SIF-RFCKIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPL 71
SIF F K +L W Y + DK + R V ++D +Y F PL
Sbjct: 1678 SIFDTFIKEVLKWKYQMFLN-----FDKCGAPTSLCQSISRPVPVRFQDCAEYFNVFLPL 1732
Query: 72 L----FEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADEVESISP--ND 125
+ FE V + + ++E + LR + E++ + + P ND
Sbjct: 1733 IILNAFETVAQEWLNSPNKENFYQLHLR-KFPADYKKYWEFLIYLEESELAKQLHPKEND 1791
Query: 126 LLLLSKEE-------FKEGSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQ 178
L+ L E+ ++ S + Y + +++R I + S
Sbjct: 1792 LVFLVPEKKYMDRHSVQDRSHYYCGYVHKFR---RTSVMRSGKTECSLCIQTQDNMPASV 1848
Query: 179 RLLNIHSLITSSVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPF----KDLILSASEK 234
+ L ++ SS+ +++L ++ + S R LA + P KDL+ + SE+
Sbjct: 1849 KELT-KCIVISSLVTTQRKLKAMSLLS----GRNQLARAVLNPNPMDFCTKDLLTTTSER 1903
Query: 235 SSGSQDQSWKIPGLLHEYIKENHNASQLEAI--------HEGLLRKAFVLIQGPPGTGKT 286
+ Y+K + N Q +AI H + K LI GPPGTGK+
Sbjct: 1904 --------------IIAYLK-DFNEDQKKAIETAYAMVKHSPSVAK-ICLIHGPPGTGKS 1947
Query: 287 QTILGLLSAILHATPARVHS 306
+TI+GLL +L + + HS
Sbjct: 1948 KTIVGLLYRLLTESQRKGHS 1967
>gi|297276540|ref|XP_002808229.1| PREDICTED: LOW QUALITY PROTEIN: regulator of nonsense transcripts
1-like [Macaca mulatta]
Length = 1096
Score = 196 bits (497), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 136/424 (32%), Positives = 222/424 (52%), Gaps = 45/424 (10%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + +R+ VLVCAPSN A+D++ ++ TG+ K+VR
Sbjct: 472 PGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGL----------KVVR 521
Query: 413 IGLKAHHSVNSVA-----------IDHL-----VEQKRDD----SAADKQKHGATRKDRD 452
+ K+ +++S +D + ++Q +D+ S+AD++++ A + R
Sbjct: 522 LCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSADEKRYRALK--RT 579
Query: 453 SIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVF 512
+ R ++N VI C+ + +G L+K+ F ++IDE+ QA EP +VP+ G KQ+
Sbjct: 580 AERELLMNADVICCTCVG-AGDPRLAKMQ--FRSILIDESTQATEPECMVPVVLGAKQLI 636
Query: 513 LVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYD 572
LVGD QL V+ A G SLF+RL G L+ QYRMHP + +FPS FY+
Sbjct: 637 LVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYE 696
Query: 573 EALEDGSDVEDYTTR--DWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
+L++G D + D+ + P FF + +G+E + S++N E V +
Sbjct: 697 GSLQNGVTAADRVKKGFDFQWPQPDKPM-FFYVTQGQEEIASSGTSYLNRTEAANVEKIT 755
Query: 631 HKLISMYPQLKSSSQLAIISPYRHQVKQFQE--RFKETFGVESQKVVDITTVDGCQGREK 688
KL+ + Q+ II+PY Q + +F + + + V+I +VD QGREK
Sbjct: 756 TKLLKAGAK---PDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREK 812
Query: 689 DVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEK 748
D I SCVRA++ + IGFL D RR+NV +TRA+ +++VG L + WN+L+ ++
Sbjct: 813 DFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKE 872
Query: 749 QDCL 752
Q L
Sbjct: 873 QKVL 876
>gi|259489087|tpe|CBF89067.1| TPA: hypothetical protein similar to possible regulator of nonsense
transcripts (Broad) [Aspergillus nidulans FGSC A4]
Length = 1077
Score = 196 bits (497), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 145/448 (32%), Positives = 216/448 (48%), Gaps = 52/448 (11%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNS-VAIDHLVEQK 433
+VLVCAPSN A+D++ R+ TG+ K VR+ K+ V S V L EQ
Sbjct: 469 QVLVCAPSNVAVDQLCERIHRTGL----------KTVRVTAKSREDVESPVGFLSLHEQV 518
Query: 434 R-DDSAADKQKHGATRKDRDSIRSA---------------ILNEAVIVCSTLSFSGSALL 477
R +DS + K + + + S ILN A ++C T +G L
Sbjct: 519 RLNDSNIELIKLNQLKSELGELSSQDEKRLKQLTRAAEREILNNADVICCTCVGAGDPRL 578
Query: 478 SKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTS 537
+KL F V+IDE+ Q+ EP ++PL GCKQV LVGD QL +++ A G S
Sbjct: 579 AKLK--FRTVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQS 636
Query: 538 LFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR--DWHEYRCF 595
LF+RL G L QYRMHP + FPS FY+ +L++G D R D+
Sbjct: 637 LFERLVILGCSPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGITSFDRLRREVDFPWPILD 696
Query: 596 GPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQ 655
P F+ + G E A S++N E V + + Q K + II+PY Q
Sbjct: 697 SPMMFWS-NLGNEEISASGTSYLNRTEAANVEKIVTRFFKAGVQPK---DIGIITPYEGQ 752
Query: 656 VKQFQERFKE--TFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRM 713
+ TF E K +++ +VD QGREKD I SCVR++D + IGFL+D RR+
Sbjct: 753 RSYIVSSMQATGTFKKEHYKEIEVASVDAFQGREKDFIILSCVRSNDHQGIGFLSDPRRL 812
Query: 714 NVGITRAKSSILVVGCASTLREDKHWNNLVKSAEK------------QDCLFRVSKPYAS 761
NV +TRAK ++++G L + WN L++ ++ Q+ L + S+P +
Sbjct: 813 NVALTRAKYGLVILGNPKVLSKHPLWNCLLQHFKERHTLVEGPLSNLQESLIQFSRPKQA 872
Query: 762 FFSDENLE---SMRKNATTDNVQGADGH 786
+ + + + N T+ + G +GH
Sbjct: 873 YRGPQRFQMAYNHVSNVTSGFMNGRNGH 900
>gi|357122747|ref|XP_003563076.1| PREDICTED: regulator of nonsense transcripts 1 homolog
[Brachypodium distachyon]
Length = 1267
Score = 196 bits (497), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 137/417 (32%), Positives = 216/417 (51%), Gaps = 51/417 (12%)
Query: 365 VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSV 424
V + +++ + +VLVCAPSN A+D++ ++ +TG+ K+VR+ K+ +V+S
Sbjct: 539 VYHMAKQGQGQVLVCAPSNVAVDQLAEKISSTGL----------KVVRLCAKSREAVSS- 587
Query: 425 AIDHL-------------------VEQKRDD----SAADKQKHGATRKDRDSIRSAILNE 461
++HL ++Q +D+ S++D++K+ A ++ + IL
Sbjct: 588 PVEHLTLHYQVRHLDTSEKSEMHKLQQLKDEQGELSSSDEKKYKALKR---ATEREILQS 644
Query: 462 AVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLP 521
A ++C T +G LS N F V+IDE+ QA EP L+PL G KQV LVGD QL
Sbjct: 645 ADVICCTCVGAGDPRLS--NFRFRQVLIDESTQATEPECLIPLVLGVKQVVLVGDHCQLG 702
Query: 522 ATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDV 581
++ A G SLF+RL G L+ QYRMHP + FPS FY+ L++G V
Sbjct: 703 PVIMCKKAARAGLAQSLFERLVILGVKPFRLQVQYRMHPCLSEFPSNCFYEGTLQNGVTV 762
Query: 582 -EDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQL 640
E +T + FF + G E A S++N E V K+++ + L
Sbjct: 763 NERQSTGIDFPWPVPNRPMFFYVQMGVEEISASGTSYLNRTEAANV----EKIVTTF--L 816
Query: 641 KSS---SQLAIISPYRHQVKQFQERFKETFGVESQ--KVVDITTVDGCQGREKDVAIFSC 695
+S SQ+ +I+PY Q + Q K +++ +VD QGREKD I SC
Sbjct: 817 RSGVVPSQIGVITPYEGQRAYIVNYMSRNGSLRQQLYKEIEVASVDSFQGREKDYIILSC 876
Query: 696 VRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
VR+++ + IGFL D RR+NV +TRA+ I+V+G L + WN+L+ ++ +CL
Sbjct: 877 VRSNEHQGIGFLNDPRRLNVALTRARYGIVVLGNPKVLSKQPLWNSLLTHYKEHECL 933
>gi|310800151|gb|EFQ35044.1| RNA helicase [Glomerella graminicola M1.001]
Length = 1086
Score = 196 bits (497), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 138/404 (34%), Positives = 207/404 (51%), Gaps = 47/404 (11%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSV-NSVAIDHLVEQK 433
+VLVCAPSN A+D++ R+ TG+ K+VR+ K+ V +SV+ L EQ
Sbjct: 494 QVLVCAPSNVAVDQLCERIHRTGL----------KVVRLTAKSREDVESSVSFLALHEQV 543
Query: 434 R-DDSAADKQKHGATRKDRDSIRSA---------------ILNEAVIVCSTLSFSGSALL 477
R +DS + K + + + S IL+ A +VC T +G L
Sbjct: 544 RMNDSNGELVKLAQLKSELGELSSQDEKKFKQLTKAAERDILHNADVVCCTCVGAGDPRL 603
Query: 478 SKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTS 537
SK+ F V+IDE+ Q+ EP ++PL GCKQV LVGD QL +++ A G S
Sbjct: 604 SKMK--FRNVLIDESTQSAEPECMIPLVLGCKQVVLVGDHKQLGPVIMNKKAAKAGLNQS 661
Query: 538 LFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRD----WHEYR 593
LF+RL L QYRMHP + FPS FYD +L++G V + RD W
Sbjct: 662 LFERLVNLRLVPIRLNIQYRMHPCLSEFPSNMFYDGSLQNGVTVRERVRRDVDFPWPVVD 721
Query: 594 CFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQ---LAIIS 650
P F+ + G E A S++N E V K+++ + K+ + + +I+
Sbjct: 722 M--PMMFWS-NLGNEEISASGTSYLNRTEASNV----EKVVTRF--FKAGVKPLDIGVIT 772
Query: 651 PYRHQVKQFQERFKE--TFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLA 708
PY Q + TF ES K V++ +VD QGREKD + SCVR++D + IGFL+
Sbjct: 773 PYEGQRSYIVSTMQNTGTFKKESYKEVEVASVDAFQGREKDFIVLSCVRSNDNQGIGFLS 832
Query: 709 DYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
D RR+NV +TRAK ++++G L + + W++L+ + + CL
Sbjct: 833 DPRRLNVALTRAKYGLVIIGNPKVLSKHELWHHLLVHFKDRKCL 876
>gi|303283432|ref|XP_003061007.1| tRNA-splicing endonuclease positive effector [Micromonas pusilla
CCMP1545]
gi|226457358|gb|EEH54657.1| tRNA-splicing endonuclease positive effector [Micromonas pusilla
CCMP1545]
Length = 1099
Score = 196 bits (497), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 126/380 (33%), Positives = 201/380 (52%), Gaps = 47/380 (12%)
Query: 376 VLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQKRD 435
VL + SN+A+D +V G+ D +R +VR+G +V + +++E+ +
Sbjct: 608 VLCTSDSNTAVDNLV-----QGMADARMR-----VVRVGRS--EAVRPELLKYVLERMFN 655
Query: 436 DSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQA 495
D T +R + L +A +VC T S +GS +L K N F V++DEA+Q
Sbjct: 656 DR---------TGPERSLAQQRALRQADVVCCTCSGAGSDMLEKFN--FSAVLLDEASQV 704
Query: 496 VEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQ 555
EP++LVPL+ GC Q+ LVGD QLP TV A + G TSLF RL G K+L Q
Sbjct: 705 TEPSSLVPLSKGCHQLVLVGDHKQLPPTVTCRDAGNAGLSTSLFDRLANMGVKPKLLDVQ 764
Query: 556 YRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFG-PFSFFDI----------- 603
+RMHP + FPS FYD ++ G+ D + G P +F +
Sbjct: 765 FRMHPALSRFPSDAFYDGRVKSGTLARDRPAPSGFAWPNAGVPIAFVPVGVPGVSGAYGG 824
Query: 604 HEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERF 663
HE +E G+GS++N E D V+ + +L+ + +++PY QV+ + +
Sbjct: 825 HERRE----GNGSFVNQREADVVVDVLSRLLRAGGGELEPRDVGVVTPYAAQVRHIRRQL 880
Query: 664 KETFGVES-------QKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVG 716
+ G+++ + V++++VDG QGREK+V + S VR++D+ ++GF++D RR NV
Sbjct: 881 RNR-GIQTGIDRETGKPGVEVSSVDGYQGREKEVMVVSTVRSNDRGTMGFVSDARRCNVT 939
Query: 717 ITRAKSSILVVGCASTLRED 736
+TRAK ++V G +TL D
Sbjct: 940 LTRAKRGVVVCGDPNTLASD 959
>gi|67516729|ref|XP_658250.1| hypothetical protein AN0646.2 [Aspergillus nidulans FGSC A4]
gi|40745995|gb|EAA65151.1| hypothetical protein AN0646.2 [Aspergillus nidulans FGSC A4]
Length = 1062
Score = 196 bits (497), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 145/448 (32%), Positives = 216/448 (48%), Gaps = 52/448 (11%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNS-VAIDHLVEQK 433
+VLVCAPSN A+D++ R+ TG+ K VR+ K+ V S V L EQ
Sbjct: 454 QVLVCAPSNVAVDQLCERIHRTGL----------KTVRVTAKSREDVESPVGFLSLHEQV 503
Query: 434 R-DDSAADKQKHGATRKDRDSIRSA---------------ILNEAVIVCSTLSFSGSALL 477
R +DS + K + + + S ILN A ++C T +G L
Sbjct: 504 RLNDSNIELIKLNQLKSELGELSSQDEKRLKQLTRAAEREILNNADVICCTCVGAGDPRL 563
Query: 478 SKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTS 537
+KL F V+IDE+ Q+ EP ++PL GCKQV LVGD QL +++ A G S
Sbjct: 564 AKLK--FRTVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQS 621
Query: 538 LFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR--DWHEYRCF 595
LF+RL G L QYRMHP + FPS FY+ +L++G D R D+
Sbjct: 622 LFERLVILGCSPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGITSFDRLRREVDFPWPILD 681
Query: 596 GPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQ 655
P F+ + G E A S++N E V + + Q K + II+PY Q
Sbjct: 682 SPMMFWS-NLGNEEISASGTSYLNRTEAANVEKIVTRFFKAGVQPK---DIGIITPYEGQ 737
Query: 656 VKQFQERFKE--TFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRM 713
+ TF E K +++ +VD QGREKD I SCVR++D + IGFL+D RR+
Sbjct: 738 RSYIVSSMQATGTFKKEHYKEIEVASVDAFQGREKDFIILSCVRSNDHQGIGFLSDPRRL 797
Query: 714 NVGITRAKSSILVVGCASTLREDKHWNNLVKSAEK------------QDCLFRVSKPYAS 761
NV +TRAK ++++G L + WN L++ ++ Q+ L + S+P +
Sbjct: 798 NVALTRAKYGLVILGNPKVLSKHPLWNCLLQHFKERHTLVEGPLSNLQESLIQFSRPKQA 857
Query: 762 FFSDENLE---SMRKNATTDNVQGADGH 786
+ + + + N T+ + G +GH
Sbjct: 858 YRGPQRFQMAYNHVSNVTSGFMNGRNGH 885
>gi|410053595|ref|XP_512972.4| PREDICTED: regulator of nonsense transcripts 1 [Pan troglodytes]
Length = 1057
Score = 196 bits (497), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 136/424 (32%), Positives = 222/424 (52%), Gaps = 45/424 (10%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + +R+ VLVCAPSN A+D++ ++ TG+ K+VR
Sbjct: 494 PGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGL----------KVVR 543
Query: 413 IGLKAHHSVNSVA-----------IDHL-----VEQKRDD----SAADKQKHGATRKDRD 452
+ K+ +++S +D + ++Q +D+ S+AD++++ A + R
Sbjct: 544 LCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSADEKRYRALK--RT 601
Query: 453 SIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVF 512
+ R ++N VI C+ + +G L+K+ F ++IDE+ QA EP +VP+ G KQ+
Sbjct: 602 AERELLMNADVICCTCVG-AGDPRLAKMQ--FRSILIDESTQATEPECMVPVVLGAKQLI 658
Query: 513 LVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYD 572
LVGD QL V+ A G SLF+RL G L+ QYRMHP + +FPS FY+
Sbjct: 659 LVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYE 718
Query: 573 EALEDGSDVEDYTTR--DWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
+L++G D + D+ + P FF + +G+E + S++N E V +
Sbjct: 719 GSLQNGVTAADRVKKGFDFQWPQPDKPM-FFYVTQGQEEIASSGTSYLNRTEAANVEKIT 777
Query: 631 HKLISMYPQLKSSSQLAIISPYRHQVKQFQE--RFKETFGVESQKVVDITTVDGCQGREK 688
KL+ + Q+ II+PY Q + +F + + + V+I +VD QGREK
Sbjct: 778 TKLLKAGAK---PDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREK 834
Query: 689 DVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEK 748
D I SCVRA++ + IGFL D RR+NV +TRA+ +++VG L + WN+L+ ++
Sbjct: 835 DFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKE 894
Query: 749 QDCL 752
Q L
Sbjct: 895 QKVL 898
>gi|226286939|gb|EEH42452.1| ATP-dependent helicase NAM7 [Paracoccidioides brasiliensis Pb18]
Length = 1087
Score = 196 bits (497), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 146/479 (30%), Positives = 238/479 (49%), Gaps = 58/479 (12%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR--IGLKAHH--------SVNSV 424
+VLVCAPSN A+D++ R+ TG++ + + + + V +G + H ++ V
Sbjct: 483 QVLVCAPSNVAVDQLCERIHKTGLKTVRVTAKSREDVESPVGFLSLHEQVHNNDSNIELV 542
Query: 425 AIDHLVEQKRDDSAADKQKHGATRKDRDSIRSA---ILNEAVIVCSTLSFSGSALLSKLN 481
++ L + + S+ D++K+ + +R+A IL+ A ++C T +G L+K
Sbjct: 543 KLNQLKAELGELSSQDEKKY------KQLVRAAEREILSNADVICCTCVGAGDPRLAKFK 596
Query: 482 HGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKR 541
F V+IDE+ Q+ EP ++PL GCKQV LVGD QL +++ A G SLF+R
Sbjct: 597 --FRTVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFER 654
Query: 542 LQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRD----WHEYRCFGP 597
L G L QYRMHP + FPS FYD +L++G + +D W P
Sbjct: 655 LVILGCAPIRLNVQYRMHPCLSEFPSNMFYDGSLQNGVTESERLLKDVDFPWP--VAHNP 712
Query: 598 FSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMY--PQLKSSSQLAIISPYRHQ 655
F+ + G E A S++N E V K+++ + +K SS + II+PY Q
Sbjct: 713 MMFWS-NLGNEEISASGTSYLNRTEAANV----EKIVTRFFKAGVKPSS-IGIITPYEGQ 766
Query: 656 VKQFQERFKE--TFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRM 713
+ TF E K +++ +VD QGREKD + SCVR++D + IGFL+D RR+
Sbjct: 767 RSYVVSSMQATGTFKKELYKEIEVASVDAFQGREKDYIVLSCVRSNDHQGIGFLSDPRRL 826
Query: 714 NVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDC------------LFRVSKPYAS 761
NV +TRAK ++++G L + WN L+ ++++C L + S+P +
Sbjct: 827 NVALTRAKYGLVILGNPKVLSKHPLWNYLLLHFKEKNCLVEGPLSNLQVSLVQFSRPKQA 886
Query: 762 FFSDENLE---SMRKNATTDNVQGADGHVPHDDETMHYANTGDADQGQADDIDNADGDA 817
+ + + + N + V G +GH +D Y +TG DD+ + A
Sbjct: 887 YRGPQRFQVAYNHASNMASGMVNGRNGH--RND----YHDTGSVASYIPDDVSSVHSSA 939
>gi|403303596|ref|XP_003942412.1| PREDICTED: regulator of nonsense transcripts 1 [Saimiri boliviensis
boliviensis]
Length = 1257
Score = 196 bits (497), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 136/424 (32%), Positives = 222/424 (52%), Gaps = 45/424 (10%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + +R+ VLVCAPSN A+D++ ++ TG+ K+VR
Sbjct: 633 PGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGL----------KVVR 682
Query: 413 IGLKAHHSVNSVA-----------IDHL-----VEQKRDD----SAADKQKHGATRKDRD 452
+ K+ +++S +D + ++Q +D+ S+AD++++ A + R
Sbjct: 683 LCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSADEKRYRALK--RT 740
Query: 453 SIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVF 512
+ R ++N VI C+ + +G L+K+ F ++IDE+ QA EP +VP+ G KQ+
Sbjct: 741 AERELLMNADVICCTCVG-AGDPRLAKMQ--FRSILIDESTQATEPECMVPVVLGAKQLI 797
Query: 513 LVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYD 572
LVGD QL V+ A G SLF+RL G L+ QYRMHP + +FPS FY+
Sbjct: 798 LVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYE 857
Query: 573 EALEDGSDVEDYTTR--DWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
+L++G D + D+ + P FF + +G+E + S++N E V +
Sbjct: 858 GSLQNGVTAADRVKKGFDFQWPQPDKPM-FFYVTQGQEEIASSGTSYLNRTEAANVEKIT 916
Query: 631 HKLISMYPQLKSSSQLAIISPYRHQVKQFQE--RFKETFGVESQKVVDITTVDGCQGREK 688
KL+ + Q+ II+PY Q + +F + + + V+I +VD QGREK
Sbjct: 917 TKLLKAGAK---PDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREK 973
Query: 689 DVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEK 748
D I SCVRA++ + IGFL D RR+NV +TRA+ +++VG L + WN+L+ ++
Sbjct: 974 DFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKE 1033
Query: 749 QDCL 752
Q L
Sbjct: 1034 QKVL 1037
>gi|297794533|ref|XP_002865151.1| low-level beta-amylase 1 [Arabidopsis lyrata subsp. lyrata]
gi|297310986|gb|EFH41410.1| low-level beta-amylase 1 [Arabidopsis lyrata subsp. lyrata]
Length = 1253
Score = 195 bits (496), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 137/417 (32%), Positives = 215/417 (51%), Gaps = 51/417 (12%)
Query: 365 VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSV 424
V + +++ + +VLVCAPSN A+D++ ++ TG+ K+VR+ K+ +V+S
Sbjct: 524 VYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGL----------KVVRLCAKSREAVSS- 572
Query: 425 AIDHL-------------------VEQKRDD----SAADKQKHGATRKDRDSIRSAILNE 461
++HL ++Q +D+ S++D++K+ + R + R +
Sbjct: 573 PVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKNLK--RQTEREITQSA 630
Query: 462 AVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLP 521
VI C+ + G+A L N F V+IDE+ QA EP L+PL G KQV LVGD QL
Sbjct: 631 DVICCTCV---GAADLRLSNFRFRQVLIDESTQATEPECLIPLVLGVKQVVLVGDHCQLG 687
Query: 522 ATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDG-SD 580
++ A G SLF+RL G L+ QYRMHP + FPS FY+ L++G +
Sbjct: 688 PVIMCKKAARAGLAQSLFERLVLLGIKPIRLQVQYRMHPALSEFPSNSFYEGTLQNGVTI 747
Query: 581 VEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQL 640
+E TT + FF + G+E A S++N E V KL++ + L
Sbjct: 748 IERQTTGIDFPWPVPNRPMFFYVQLGQEEISASGTSYLNRTEAANV----EKLVTAF--L 801
Query: 641 KSS---SQLAIISPYRHQVKQFQERFKETFGVESQ--KVVDITTVDGCQGREKDVAIFSC 695
KS SQ+ +I+PY Q + Q K +++ +VD QGREKD I SC
Sbjct: 802 KSGVVPSQIGVITPYEGQRAYIVNYMARNGSLRQQLYKEIEVASVDSFQGREKDYIILSC 861
Query: 696 VRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
VR+++ + IGFL D RR+NV +TRA+ I+++G L + WN L+ ++ +CL
Sbjct: 862 VRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECL 918
>gi|296482130|tpg|DAA24245.1| TPA: senataxin [Bos taurus]
Length = 823
Score = 195 bits (496), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 144/458 (31%), Positives = 216/458 (47%), Gaps = 86/458 (18%)
Query: 375 RVLVCAPSNSALDEIVLRLL---------------NTG----IRDENIRSYTPKIVRIGL 415
RVLVCAPSN+A+DE++ +++ N G +R +S ++++ L
Sbjct: 153 RVLVCAPSNAAVDELMKKIILEFKEKCKDKKNPMGNCGDINLVRLGPEKSINNEVLKFSL 212
Query: 416 --KAHHSVNSVAIDHLVEQKRDDSAADKQ------KHGATRKDRDSIR------------ 455
+ +H + H+ E + D Q + R R+S R
Sbjct: 213 DSQVNHRMKKDLPSHVQEMHKRKEFLDHQLDELSRQRALCRGGRESQRQELDGKIARVSK 272
Query: 456 --------------------SAILNEAVIVCSTLSFSGSALLSKLNHG-----FDVVIID 490
S I+ E+ I+C TLS SG LL G F VI+D
Sbjct: 273 ERQELASKIKEVQGRPQKTQSIIILESHIICCTLSTSGGLLLEAAFRGQGGVPFSCVIVD 332
Query: 491 EAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQR------ 544
EA Q+ E TL PL C ++ LVGDP QLP TVIS A+ GY S+ R +
Sbjct: 333 EAGQSCEVETLTPLIHRCNKLVLVGDPKQLPPTVISVKAQDYGYDQSMMARFHKLLEESV 392
Query: 545 -----AGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVE-DYTTRDWHEYRCFGPF 598
PV L QYRMHP++ FPS YD L E + DW F P+
Sbjct: 393 EHNMIGRLPVLQLTIQYRMHPDICLFPSSYIYDGILRTNRGTETSRCSSDWP----FQPY 448
Query: 599 SFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQ 658
FD+ +G E + + S++N+ E+ V+ L KLI + + + II+ Y+ Q
Sbjct: 449 LVFDVGDGLERR--DNDSYVNVQEIKLVMELI-KLIKDKRRDVTFRNIGIITHYKAQKTM 505
Query: 659 FQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRA-SDKKSIGFLADYRRMNVGI 717
Q+ + F + + ++ TVD QGR+KD I +CVRA + + SIGFLA +R+NV I
Sbjct: 506 IQKDLDKEF--DRKGAAEVDTVDAFQGRQKDCVIVTCVRANATQGSIGFLASLQRLNVTI 563
Query: 718 TRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRV 755
TRAK S+ ++G TL E++HW +L++ A+K+ + +
Sbjct: 564 TRAKYSLFILGHLRTLVENRHWYHLIQDAQKRGAIIKT 601
>gi|348500490|ref|XP_003437806.1| PREDICTED: regulator of nonsense transcripts 1-like [Oreochromis
niloticus]
Length = 1109
Score = 195 bits (496), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 135/424 (31%), Positives = 222/424 (52%), Gaps = 45/424 (10%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + +R+ VLVCAPSN A+D++ ++ TG+ K+VR
Sbjct: 473 PGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGL----------KVVR 522
Query: 413 IGLKAHHSVNSVA-----------IDHL-----VEQKRDD----SAADKQKHGATRKDRD 452
+ K+ +++S +D + ++Q +D+ S++D++++ A R R
Sbjct: 523 LCAKSREAIDSPVSFLALHNQTRNMDSMPELQKLQQLKDETGELSSSDEKRYRALR--RT 580
Query: 453 SIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVF 512
+ R ++N VI C+ + +G L+K+ F ++IDE+ QA EP +VP+ G KQ+
Sbjct: 581 AERELLMNADVICCTCVG-AGDPRLAKMQ--FRSILIDESTQATEPECMVPVVLGAKQLI 637
Query: 513 LVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYD 572
LVGD QL V+ A G SLF+RL G L+ QYRMHP + +FPS FY+
Sbjct: 638 LVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYE 697
Query: 573 EALEDGSDVEDYTTR--DWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
+L++G D + D+ + P FF + +G+E + S++N E V +
Sbjct: 698 GSLQNGVTAADRVKKGFDFQWPQPDKPM-FFYVTQGQEEIASSGTSYLNRTEAANVEKIT 756
Query: 631 HKLISMYPQLKSSSQLAIISPYRHQVKQFQE--RFKETFGVESQKVVDITTVDGCQGREK 688
+L+ + Q+ II+PY Q + +F + + + V+I +VD QGREK
Sbjct: 757 TRLLKAGAK---PDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREK 813
Query: 689 DVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEK 748
D I SCVRA++ + IGFL D RR+NV +TRA+ +++VG L + WN+L+ ++
Sbjct: 814 DFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKE 873
Query: 749 QDCL 752
Q L
Sbjct: 874 QKVL 877
>gi|149039168|gb|EDL93388.1| rCG45460 [Rattus norvegicus]
Length = 954
Score = 195 bits (496), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 148/460 (32%), Positives = 218/460 (47%), Gaps = 84/460 (18%)
Query: 375 RVLVCAPSNSALDEIVLRLL---------------NTG----IRDENIRSYTPKIVRIGL 415
RVLVCAPSN+A+DE++ +++ N G +R +S ++++ L
Sbjct: 286 RVLVCAPSNAAVDELMKKIILEFKEKCKDKKNPLGNCGDINLVRLGPEKSINTEVLKFSL 345
Query: 416 KAH--HSVNSVAIDHLVEQKRDDSAADKQKHGATR------------------------K 449
+ H + H+ E R D Q +R K
Sbjct: 346 DSQVSHRMKKDLPSHIQEMLRRKEILDAQLDELSRQRALCRGGREMQRQELDEHIVIVSK 405
Query: 450 DRDSIRS--------------AILNEAVIVCSTLSFSGSALLSKLNHG-----FDVVIID 490
+R + S I+ E+ ++C TLS SG LL G F VI+D
Sbjct: 406 ERQELASKIKEVQGRPQRAQNTIILESHVICCTLSTSGGLLLESAFRGQGGVPFSCVIVD 465
Query: 491 EAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQR------ 544
EA Q+ E TL PL C ++ LVGDP QLP TVIS A+ GY S+ R +
Sbjct: 466 EAGQSCEVETLSPLIHRCNKLVLVGDPKQLPPTVISMKAQEYGYDQSMMARFCKLLEENV 525
Query: 545 -----AGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFS 599
PV L QYRMHP++ FPS Y++ L+ E T R E+ F P+
Sbjct: 526 EQNMIGRLPVLQLTIQYRMHPDICLFPSNYVYNKNLKTNRLTE--TIRCSSEWP-FQPYL 582
Query: 600 FFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQF 659
FD+ +G E + + S+IN+ E+ V+ + KLI + S + II+ Y+ Q
Sbjct: 583 VFDVGDGSEQR--DNDSYINVQEIKLVMEII-KLIKEKRKDISFRNIGIITHYKAQKTMI 639
Query: 660 QERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASD-KKSIGFLADYRRMNVGIT 718
Q+ ++ F + VD TVD QGR+KD I +CVRAS + SIGFLA +R+NV IT
Sbjct: 640 QKDLEKEFDKKGPAEVD--TVDAFQGRQKDCIIVTCVRASAVQGSIGFLASLQRLNVTIT 697
Query: 719 RAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRVSKP 758
RAK S+ ++G TL E++HW L++ A+K+ + + P
Sbjct: 698 RAKYSLFILGHLRTLMENQHWYELIQDAQKRGAIIKTCDP 737
>gi|400597184|gb|EJP64919.1| Regulator of nonsense transcripts 1 [Beauveria bassiana ARSEF 2860]
Length = 1083
Score = 195 bits (496), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 139/420 (33%), Positives = 206/420 (49%), Gaps = 55/420 (13%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSV-NSVAIDHLVEQ- 432
+VLVCAPSN A+D++ R+ TG+ K+VR+ K+ V +SV+ L EQ
Sbjct: 492 QVLVCAPSNVAVDQLCERIHRTGL----------KVVRLTAKSREDVESSVSFLALHEQV 541
Query: 433 ---------------KRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALL 477
K + Q R+ + ILN A +VC T +G L
Sbjct: 542 RMSEHNSEFAKLSQLKNEAGELSSQDEKKFRQLTKAAEREILNNADVVCCTCVGAGDPRL 601
Query: 478 SKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTS 537
SKL F V+IDE+ Q+ EP ++PL GCKQV LVGD QL +++ A G S
Sbjct: 602 SKLK--FRSVLIDESTQSAEPECIIPLMLGCKQVVLVGDHKQLGPVIMNKKAAKAGLSQS 659
Query: 538 LFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRD----WHEYR 593
LF+RL + +L TQYRMHP + FPS FYD +L++G E +D W
Sbjct: 660 LFERLMQLRLQPILLNTQYRMHPCLSEFPSNMFYDGSLQNGVTQEQRIRKDVDFPWPVAE 719
Query: 594 CFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLK-SSSQLAIISPY 652
P F+ +E +G+ S++N E V K+++ + + S++ +I+PY
Sbjct: 720 M--PMMFWSNIGNEEISTSGT-SYLNRTEASNV----EKIVTRFFKAGVKPSEIGVITPY 772
Query: 653 RHQVKQFQERFKE--TFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADY 710
Q + T E K V++ +VD QGREKD + SCVR+++ + IGFL+D
Sbjct: 773 EGQRSYIVTTMQNAGTSKKEYYKSVEVASVDAFQGREKDFIVLSCVRSNENQGIGFLSDP 832
Query: 711 RRMNVGITRAKSSILVVGCASTLREDKHWNNLVKS------------AEKQDCLFRVSKP 758
RR+NV +TRAK ++++G L + + W NL+ Q CL + SKP
Sbjct: 833 RRLNVALTRAKYGVVILGNPRVLSKHELWYNLLTHFRDRRCFVEGPLTNFQQCLLQFSKP 892
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 29/48 (60%), Gaps = 7/48 (14%)
Query: 241 QSWKIPGLLHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQT 288
+ W PGL + N SQ++AI +L+K LIQGPPGTGKT T
Sbjct: 437 KKWSAPGL------PDLNQSQVDAIRS-VLQKPLSLIQGPPGTGKTVT 477
>gi|389640681|ref|XP_003717973.1| regulator-nonsense transcripts 1 [Magnaporthe oryzae 70-15]
gi|351640526|gb|EHA48389.1| regulator-nonsense transcripts 1 [Magnaporthe oryzae 70-15]
gi|440471031|gb|ELQ40068.1| ATP-dependent helicase NAM7 [Magnaporthe oryzae Y34]
gi|440490268|gb|ELQ69843.1| ATP-dependent helicase NAM7 [Magnaporthe oryzae P131]
Length = 1105
Score = 195 bits (496), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 134/402 (33%), Positives = 206/402 (51%), Gaps = 43/402 (10%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSV-NSVAIDHLVEQK 433
+VLVCAPSN A+D++ R+ TG+ K+VR+ K+ V +SV+ L EQ
Sbjct: 497 QVLVCAPSNVAVDQLCERVHRTGL----------KVVRLTAKSREDVESSVSFLALHEQV 546
Query: 434 R-DDSAADKQKHGATRKDRDSIRSA---------------ILNEAVIVCSTLSFSGSALL 477
R +D+ + K + + + S IL+ A +VC T +G L
Sbjct: 547 RMNDTNPELAKLQQLKSELGELSSQDEKKFKQLTKAAEREILSNADVVCCTCVGAGDPRL 606
Query: 478 SKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTS 537
+KL F V+IDE+ Q+ EP ++PL GCKQV LVGD QL +++ A G S
Sbjct: 607 AKLK--FRNVLIDESTQSAEPECMIPLVLGCKQVVLVGDHKQLGPVIMNKKAAKAGLNQS 664
Query: 538 LFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRD----WHEYR 593
LF+RL + G L QYRMHP + FPS FY+ +L++G ++ RD W
Sbjct: 665 LFERLVKLGLTPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGVTIQQRLRRDVDFPWPVAD 724
Query: 594 CFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLK-SSSQLAIISPY 652
P F+ + G E A S++N E V KL++ + + + +++PY
Sbjct: 725 M--PMMFWS-NLGNEEISASGTSYLNRTEASNV----EKLVTRFFKAGVKPGDIGVVTPY 777
Query: 653 RHQVKQFQERFKE--TFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADY 710
Q + TF ES K V++ +VD QGREKD + SCVR+++ + IGFL+D
Sbjct: 778 EGQRSYIVSTMQNTGTFKKESYKEVEVASVDAFQGREKDFIVLSCVRSNESQGIGFLSDP 837
Query: 711 RRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
RR+NV +TRAK ++++G L + + W++L+ + CL
Sbjct: 838 RRLNVALTRAKYGVVIIGNPKVLSKHELWHHLLIHFRDRKCL 879
>gi|308810357|ref|XP_003082487.1| tRNA-splicing endonuclease positive effector (SEN1) (ISS)
[Ostreococcus tauri]
gi|116060956|emb|CAL56344.1| tRNA-splicing endonuclease positive effector (SEN1) (ISS)
[Ostreococcus tauri]
Length = 1079
Score = 195 bits (496), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 134/378 (35%), Positives = 204/378 (53%), Gaps = 35/378 (9%)
Query: 376 VLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQKRD 435
VL + SN+A+D +V L G+ IR P+ VR L + N++
Sbjct: 678 VLCTSDSNTAVDNMVEGLAKAGV--NVIRLGRPEAVRPDLARYQIENAI----------- 724
Query: 436 DSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQA 495
GAT+ + + + A +C+T S +GS L ++N F V++DEA+Q
Sbjct: 725 -------PPGATKHEAYEAQLRAVRYAQAICATCSGAGSDFLDRIN--FSAVMLDEASQV 775
Query: 496 VEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQ 555
EP +LVPLA GC+Q+ LVGD QLP TV+S AE G SLF RL RAG +L TQ
Sbjct: 776 TEPMSLVPLANGCQQLVLVGDHKQLPPTVVSREAELAGMTLSLFDRLTRAGVKPYLLDTQ 835
Query: 556 YRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFG-PFSFFDIHEG-KESQPAG 613
+RMHP + FPS FY+ ++ G+ +D ++ P +F E KE+
Sbjct: 836 FRMHPAISHFPSHSFYNGLVKSGTPAKDRPAPKGFQWPIPSVPIAFCPTPENSKETN--D 893
Query: 614 SGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKE---TFGVE 670
+ S+ N E + VL + ++S +L+ + I++PY QVK + ++ GV+
Sbjct: 894 NLSYSNRVEAERVLEILLGVLSAG-ELR-PCHVGIVTPYAAQVKLIRSMLRQRGVRTGVD 951
Query: 671 ---SQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVV 727
+ +++++VDG QGREK++ I S VRA+D +IGF+AD RR NV +TRA+ ++VV
Sbjct: 952 RDTGEAGIEVSSVDGYQGREKELMIVSTVRANDLNTIGFVADARRCNVTLTRARRGVIVV 1011
Query: 728 GCASTLREDKH-WNNLVK 744
G ASTL +D+ W V+
Sbjct: 1012 GHASTLSKDRRTWGPWVR 1029
Score = 43.5 bits (101), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 30/47 (63%), Gaps = 3/47 (6%)
Query: 253 IKENH--NASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAIL 297
I NH NASQ +A+ L R+ LIQGPPGTGKT T + ++ +L
Sbjct: 626 ITRNHGLNASQRDAMKAALERR-LTLIQGPPGTGKTHTSVAIVRGML 671
>gi|408397555|gb|EKJ76696.1| hypothetical protein FPSE_03107 [Fusarium pseudograminearum CS3096]
Length = 1083
Score = 195 bits (495), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 143/427 (33%), Positives = 212/427 (49%), Gaps = 61/427 (14%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSV-NSVAIDHLVEQK 433
+VLVCAPSN A+D++ R+ TG+ K+VR+ K+ V +SV+ L EQ
Sbjct: 493 QVLVCAPSNVAVDQLCERVHRTGL----------KVVRLTAKSREDVESSVSFLALHEQV 542
Query: 434 R-------------------DDSAADKQKHGATRK--DRDSIRSAILNEAVIVCSTLSFS 472
R + S+ D++K+ K +RD ILN A +VC T +
Sbjct: 543 RMSEHNSELVKLSQLKNELGELSSQDEKKYKQLTKIAERD-----ILNNADVVCCTCVGA 597
Query: 473 GSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHL 532
G LSK+ F V+IDE+ Q+ EP ++PL GCKQV LVGD QL +++ A
Sbjct: 598 GDPRLSKMK--FRNVLIDESTQSAEPECMIPLVLGCKQVVLVGDHKQLGPVIMNKKAAKA 655
Query: 533 GYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEY 592
G SLF+RL L QYRMHP + FPS FYD +L++G E+ +D
Sbjct: 656 GLNQSLFERLVNLKLSPIRLNIQYRMHPCLSEFPSNMFYDGSLQNGVTHENRLRKDVDFP 715
Query: 593 RCFG--PFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLK-SSSQLAII 649
G P F+ + G E A S++N E V K ++ + + + + +I
Sbjct: 716 WPVGEMPMMFWS-NLGHEEISASGTSYLNRTEASNV----EKAVTRFFKAGVKPADIGVI 770
Query: 650 SPYRHQVKQFQERFKE--TFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFL 707
+PY Q + T+ E K V++ +VD QGREKD + SCVR++D + IGFL
Sbjct: 771 TPYEGQRSYIVTTMQNSGTYKKEYYKEVEVASVDAFQGREKDFIVLSCVRSNDNQGIGFL 830
Query: 708 ADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLV------------KSAEKQDCLFRV 755
+D RR+NV +TRAK ++++G L + + W+NL+ Q CL +
Sbjct: 831 SDPRRLNVALTRAKYGLVILGNPKVLSKHELWHNLLVHFKDRKCFVEGPLTNLQACLLQF 890
Query: 756 SKPYASF 762
S+P SF
Sbjct: 891 SRPKVSF 897
>gi|426230268|ref|XP_004009198.1| PREDICTED: regulator of nonsense transcripts 1 [Ovis aries]
Length = 1341
Score = 195 bits (495), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 135/424 (31%), Positives = 222/424 (52%), Gaps = 45/424 (10%)
Query: 355 PTTGNELKPEVV--NSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + + + +R+ VLVCAPSN A+D++ ++ TG+ K+VR
Sbjct: 683 PGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGL----------KVVR 732
Query: 413 IGLKAHHSVNSVA-----------IDHL-----VEQKRDD----SAADKQKHGATRKDRD 452
+ K+ +++S +D + ++Q +D+ S+AD++++ A + R
Sbjct: 733 LCAKSRKAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSADEKRYRALK--RT 790
Query: 453 SIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVF 512
+ R ++N VI C+ + +G L+K+ F ++IDE+ QA EP +VP+ G KQ+
Sbjct: 791 AERELLMNADVICCTCVG-AGDPRLAKMQ--FRSILIDESTQATEPECMVPVVLGAKQLI 847
Query: 513 LVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYD 572
LVGD QL V+ A G SLF+RL G L+ QYRMHP + +FPS FY+
Sbjct: 848 LVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYE 907
Query: 573 EALEDGSDVEDYTTR--DWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
+L++G D + D+ + P FF + +G+E + S++N E V +
Sbjct: 908 GSLQNGVTAADRVKKGFDFQWPQPDKPM-FFYVTQGQEEIASSGTSYLNRTEAANVEKIT 966
Query: 631 HKLISMYPQLKSSSQLAIISPYRHQVKQFQE--RFKETFGVESQKVVDITTVDGCQGREK 688
KL+ + Q+ II+PY Q + +F + + + V+I +VD QGREK
Sbjct: 967 TKLLKAGAK---PDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREK 1023
Query: 689 DVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEK 748
D I SCVRA++ + IGFL D RR+NV +TRA+ +++VG L + WN+L+ ++
Sbjct: 1024 DFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKE 1083
Query: 749 QDCL 752
Q L
Sbjct: 1084 QKVL 1087
>gi|410924489|ref|XP_003975714.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 1
[Takifugu rubripes]
Length = 1111
Score = 195 bits (495), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 133/424 (31%), Positives = 218/424 (51%), Gaps = 45/424 (10%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + +R+ VLVCAPSN A+D++ ++ TG+ K+VR
Sbjct: 471 PGTGKTVTSATIVYHLARQGSGPVLVCAPSNIAVDQLTEKIHQTGL----------KVVR 520
Query: 413 IGLKAHHSVNSVA--------------------IDHLVEQKRDDSAADKQKHGATRKDRD 452
+ K+ +++S + L ++ + S++D++++ A R R
Sbjct: 521 LCAKSREAIDSPVSFLALHNQTRNMESMPELQKLQQLKDETGELSSSDEKRYRALR--RT 578
Query: 453 SIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVF 512
+ R ++N VI C+ + +G L+K+ F ++IDE+ QA EP +VP+ G KQ+
Sbjct: 579 AERELLMNADVICCTCVG-AGDPRLAKMQ--FRSILIDESTQATEPECMVPVVLGAKQLI 635
Query: 513 LVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYD 572
LVGD QL V+ A G SLF+RL G L+ QYRMHP + +FPS FY+
Sbjct: 636 LVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYE 695
Query: 573 EALEDGSDVEDYTTR--DWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
+L++G D + D+ + P FF + +G+E + S++N E V +
Sbjct: 696 GSLQNGVTAADRVKKGFDFQWPQPDKPM-FFYVTQGQEEIASSGTSYLNRTEAANVEKIT 754
Query: 631 HKLISMYPQLKSSSQLAIISPYRHQVKQFQE--RFKETFGVESQKVVDITTVDGCQGREK 688
+L+ + Q+ II+PY Q + +F + + + V+I +VD QGREK
Sbjct: 755 TRLLKAGAK---PDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREK 811
Query: 689 DVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEK 748
D I SCVRA++ + IGFL D RR+NV +TRA+ +++VG L + WN+L+ ++
Sbjct: 812 DFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKE 871
Query: 749 QDCL 752
Q L
Sbjct: 872 QKVL 875
>gi|251836854|pdb|2WJV|A Chain A, Crystal Structure Of The Complex Between Human Nonsense
Mediated Decay Factors Upf1 And Upf2
gi|251836855|pdb|2WJV|B Chain B, Crystal Structure Of The Complex Between Human Nonsense
Mediated Decay Factors Upf1 And Upf2
gi|251836858|pdb|2WJY|A Chain A, Crystal Structure Of The Complex Between Human Nonsense
Mediated Decay Factors Upf1 And Upf2 Orthorhombic Form
Length = 800
Score = 195 bits (495), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 136/424 (32%), Positives = 222/424 (52%), Gaps = 45/424 (10%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + +R+ VLVCAPSN A+D++ ++ TG+ K+VR
Sbjct: 380 PGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGL----------KVVR 429
Query: 413 IGLKAHHSVNSVA-----------IDHL-----VEQKRDD----SAADKQKHGATRKDRD 452
+ K+ +++S +D + ++Q +D+ S+AD++++ A + R
Sbjct: 430 LCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSADEKRYRALK--RT 487
Query: 453 SIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVF 512
+ R ++N VI C+ + +G L+K+ F ++IDE+ QA EP +VP+ G KQ+
Sbjct: 488 AERELLMNADVICCTCVG-AGDPRLAKMQ--FRSILIDESTQATEPECMVPVVLGAKQLI 544
Query: 513 LVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYD 572
LVGD QL V+ A G SLF+RL G L+ QYRMHP + +FPS FY+
Sbjct: 545 LVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYE 604
Query: 573 EALEDGSDVEDYTTR--DWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
+L++G D + D+ + P FF + +G+E + S++N E V +
Sbjct: 605 GSLQNGVTAADRVKKGFDFQWPQPDKPM-FFYVTQGQEEIASSGTSYLNRTEAANVEKIT 663
Query: 631 HKLISMYPQLKSSSQLAIISPYRHQVKQFQE--RFKETFGVESQKVVDITTVDGCQGREK 688
KL+ + Q+ II+PY Q + +F + + + V+I +VD QGREK
Sbjct: 664 TKLLKAGAK---PDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREK 720
Query: 689 DVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEK 748
D I SCVRA++ + IGFL D RR+NV +TRA+ +++VG L + WN+L+ ++
Sbjct: 721 DFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKE 780
Query: 749 QDCL 752
Q L
Sbjct: 781 QKVL 784
>gi|46136829|ref|XP_390106.1| RNT1_NEUCR Regulator of nonsense transcripts 1 homolog [Gibberella
zeae PH-1]
Length = 1083
Score = 195 bits (495), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 143/427 (33%), Positives = 212/427 (49%), Gaps = 61/427 (14%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSV-NSVAIDHLVEQK 433
+VLVCAPSN A+D++ R+ TG+ K+VR+ K+ V +SV+ L EQ
Sbjct: 493 QVLVCAPSNVAVDQLCERVHRTGL----------KVVRLTAKSREDVESSVSFLALHEQV 542
Query: 434 R-------------------DDSAADKQKHGATRK--DRDSIRSAILNEAVIVCSTLSFS 472
R + S+ D++K+ K +RD ILN A +VC T +
Sbjct: 543 RMSEHNSELVKLSQLKNELGELSSQDEKKYKQLTKIAERD-----ILNNADVVCCTCVGA 597
Query: 473 GSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHL 532
G LSK+ F V+IDE+ Q+ EP ++PL GCKQV LVGD QL +++ A
Sbjct: 598 GDPRLSKMK--FRNVLIDESTQSAEPECMIPLVLGCKQVVLVGDHKQLGPVIMNKKAAKA 655
Query: 533 GYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEY 592
G SLF+RL L QYRMHP + FPS FYD +L++G E+ +D
Sbjct: 656 GLNQSLFERLVNLKLSPIRLNIQYRMHPCLSEFPSNMFYDGSLQNGVTHENRLRKDVDFP 715
Query: 593 RCFG--PFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLK-SSSQLAII 649
G P F+ + G E A S++N E V K ++ + + + + +I
Sbjct: 716 WPVGEMPMMFWS-NLGHEEISASGTSYLNRTEASNV----EKAVTRFFKAGVKPADIGVI 770
Query: 650 SPYRHQVKQFQERFKE--TFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFL 707
+PY Q + T+ E K V++ +VD QGREKD + SCVR++D + IGFL
Sbjct: 771 TPYEGQRSYIVTTMQNSGTYKKEYYKEVEVASVDAFQGREKDFIVLSCVRSNDNQGIGFL 830
Query: 708 ADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLV------------KSAEKQDCLFRV 755
+D RR+NV +TRAK ++++G L + + W+NL+ Q CL +
Sbjct: 831 SDPRRLNVALTRAKYGLVILGNPKVLSKHELWHNLLVHFKDRKCFVEGPLTNLQACLLQF 890
Query: 756 SKPYASF 762
S+P SF
Sbjct: 891 SRPKVSF 897
>gi|326934529|ref|XP_003213341.1| PREDICTED: regulator of nonsense transcripts 1-like [Meleagris
gallopavo]
Length = 1059
Score = 195 bits (495), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 136/424 (32%), Positives = 222/424 (52%), Gaps = 47/424 (11%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + +R+ VLVCAPSN A+D++ ++ TG+ K+VR
Sbjct: 437 PGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGL----------KVVR 486
Query: 413 IGLKAHHSVNSVA-----------IDHL-----VEQKRDD----SAADKQKHGATRKDRD 452
+ K+ +++S +D + ++Q +D+ S+AD++++ A + R
Sbjct: 487 LCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSADEKRYRALK--RT 544
Query: 453 SIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVF 512
+ R ++N VI C+ + +G L+K+ F ++IDE+ QA EP +VP+ G KQ+
Sbjct: 545 AERELLMNADVICCTCVG-AGDPRLAKMQ--FRSILIDESTQATEPECMVPVVLGAKQLI 601
Query: 513 LVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYD 572
LVGD QL V+ A G SLF+RL P L+ QYRMHP + +FPS FY+
Sbjct: 602 LVGDHCQLGPVVMCKKAAKAGLSQSLFERL--VVLPWGCLQVQYRMHPALSAFPSNIFYE 659
Query: 573 EALEDGSDVEDYTTR--DWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
+L++G D + D+ + P FF + +G+E + S++N E V +
Sbjct: 660 GSLQNGVTAADRVKKGFDFQWPQPDKPM-FFYVTQGQEEIASSGTSYLNRTEAANVEKIT 718
Query: 631 HKLISMYPQLKSSSQLAIISPYRHQVKQFQE--RFKETFGVESQKVVDITTVDGCQGREK 688
KL+ + Q+ II+PY Q + +F + + + V+I +VD QGREK
Sbjct: 719 TKLLKAGAK---PDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREK 775
Query: 689 DVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEK 748
D I SCVRA++ + IGFL D RR+NV +TRA+ +++VG L + WN+L+ ++
Sbjct: 776 DFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKE 835
Query: 749 QDCL 752
Q L
Sbjct: 836 QKVL 839
>gi|325093995|gb|EGC47305.1| ATP-dependent helicase NAM7 [Ajellomyces capsulatus H88]
Length = 1071
Score = 195 bits (495), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 145/479 (30%), Positives = 236/479 (49%), Gaps = 58/479 (12%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR--IGLKAHH--------SVNSV 424
+VLVCAPSN A+D++ R+ TG++ + + + + V +G + H ++ V
Sbjct: 467 QVLVCAPSNVAVDQLCERIHRTGLKTVRVTAKSREDVESPVGFLSLHEQVHNNDSNIELV 526
Query: 425 AIDHLVEQKRDDSAADKQKHGATRKDRDSIRSA---ILNEAVIVCSTLSFSGSALLSKLN 481
++ L + + S+ D++K + +R+A IL+ A ++C T +G L+K
Sbjct: 527 KLNQLKAELGELSSQDEKKF------KQLVRAAEKEILSNADVICCTCVGAGDPRLAKFK 580
Query: 482 HGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKR 541
F V+IDE+ Q+ EP ++PL GCKQV LVGD QL +++ A G SLF+R
Sbjct: 581 --FRTVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFER 638
Query: 542 LQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRD----WHEYRCFGP 597
L G L QYRMHP + FPS FYD +L++G + +D W P
Sbjct: 639 LVILGCAPIRLNVQYRMHPCLSEFPSNMFYDGSLQNGVTESERLLKDVDFPWPV--AHNP 696
Query: 598 FSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMY--PQLKSSSQLAIISPYRHQ 655
F+ + G E A S++N E V K+++ + +K SS + II+PY Q
Sbjct: 697 MMFWS-NLGNEEISASGTSYLNRTEAANV----EKIVTRFFKAGVKPSS-IGIITPYEGQ 750
Query: 656 VKQFQERFKE--TFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRM 713
+ TF E K +++ +VD QGREKD + SCVR++D + IGFL+D RR+
Sbjct: 751 RSYVVSSMQATGTFKKELYKEIEVASVDAFQGREKDYIVLSCVRSNDHQGIGFLSDPRRL 810
Query: 714 NVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDC------------LFRVSKPYAS 761
NV +TRAK ++++G L + WN L+ ++++C L + S+P +
Sbjct: 811 NVALTRAKYGLVILGNPKVLSKHPLWNYLLLHFKEKNCLVEGPLSNLQVSLVQFSRPKQA 870
Query: 762 FFSDENLE---SMRKNATTDNVQGADGHVPHDDETMHYANTGDADQGQADDIDNADGDA 817
+ + + + N + V G +GH Y +TG DD+ + + A
Sbjct: 871 YRGPQRFQVAYNHASNMASGMVNGRNGH------RGDYHDTGSVASYIPDDVSSVNSSA 923
>gi|410924491|ref|XP_003975715.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 2
[Takifugu rubripes]
Length = 1122
Score = 195 bits (495), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 133/424 (31%), Positives = 218/424 (51%), Gaps = 45/424 (10%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + +R+ VLVCAPSN A+D++ ++ TG+ K+VR
Sbjct: 482 PGTGKTVTSATIVYHLARQGSGPVLVCAPSNIAVDQLTEKIHQTGL----------KVVR 531
Query: 413 IGLKAHHSVNSVA--------------------IDHLVEQKRDDSAADKQKHGATRKDRD 452
+ K+ +++S + L ++ + S++D++++ A R R
Sbjct: 532 LCAKSREAIDSPVSFLALHNQTRNMESMPELQKLQQLKDETGELSSSDEKRYRALR--RT 589
Query: 453 SIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVF 512
+ R ++N VI C+ + +G L+K+ F ++IDE+ QA EP +VP+ G KQ+
Sbjct: 590 AERELLMNADVICCTCVG-AGDPRLAKMQ--FRSILIDESTQATEPECMVPVVLGAKQLI 646
Query: 513 LVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYD 572
LVGD QL V+ A G SLF+RL G L+ QYRMHP + +FPS FY+
Sbjct: 647 LVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYE 706
Query: 573 EALEDGSDVEDYTTR--DWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
+L++G D + D+ + P FF + +G+E + S++N E V +
Sbjct: 707 GSLQNGVTAADRVKKGFDFQWPQPDKPM-FFYVTQGQEEIASSGTSYLNRTEAANVEKIT 765
Query: 631 HKLISMYPQLKSSSQLAIISPYRHQVKQFQE--RFKETFGVESQKVVDITTVDGCQGREK 688
+L+ + Q+ II+PY Q + +F + + + V+I +VD QGREK
Sbjct: 766 TRLLKAGAK---PDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREK 822
Query: 689 DVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEK 748
D I SCVRA++ + IGFL D RR+NV +TRA+ +++VG L + WN+L+ ++
Sbjct: 823 DFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKE 882
Query: 749 QDCL 752
Q L
Sbjct: 883 QKVL 886
>gi|410074371|ref|XP_003954768.1| hypothetical protein KAFR_0A01950 [Kazachstania africana CBS 2517]
gi|372461350|emb|CCF55633.1| hypothetical protein KAFR_0A01950 [Kazachstania africana CBS 2517]
Length = 995
Score = 195 bits (495), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 137/424 (32%), Positives = 225/424 (53%), Gaps = 47/424 (11%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + S+ ++ R+LVCAPSN A+D + +L + G+ K+VR
Sbjct: 444 PGTGKTVTSATIVYHLSKIHKDRILVCAPSNVAVDHLAAKLRDLGL----------KVVR 493
Query: 413 IGLKAHH----SVNSVAIDHLVEQK-----------RDD----SAADKQKHGATRKDRDS 453
+ K+ SV+S+A+ +LV + +D+ SAAD ++ + +S
Sbjct: 494 LTAKSREDVESSVSSLALHNLVARSSQGELKKLLKMKDEIGELSAADTKRFVKLVRKAES 553
Query: 454 IRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFL 513
IL +A +VC T +G +L+ F V+IDE+ QA EP L+P+ G KQV L
Sbjct: 554 ---EILAKADVVCCTCVGAGD---KRLDAKFRTVLIDESTQASEPECLIPIVKGAKQVIL 607
Query: 514 VGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDE 573
VGD QL ++ A G SLF+RL G+ L+ QYRM+P + FPS FY+
Sbjct: 608 VGDHQQLGPVILERKAADAGLRQSLFERLISLGHVPIRLEVQYRMNPNLSEFPSNMFYEG 667
Query: 574 ALEDGSDVEDYTTRD-WHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHK 632
+L++G +E T + + G F + G+E A S++N E + +
Sbjct: 668 SLQNGVTIEQRTVSNSTFPWPIHGVPMMFWANYGREEISANGTSYLNRIEA----MNCER 723
Query: 633 LIS-MYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKV---VDITTVDGCQGREK 688
+I+ ++ Q+ +I+PY Q + + ++ + GV + + V++ +VD QGREK
Sbjct: 724 IITRLFKDGVKPEQIGVITPYEGQ-RAYILQYMQMNGVLDKNLYVKVEVASVDAFQGREK 782
Query: 689 DVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEK 748
D I SCVRA+++++IGFL D RR+NVG+TRAK ++++G +L + WN+L+ +
Sbjct: 783 DYIILSCVRANEQQAIGFLRDPRRLNVGLTRAKYGLIILGNPRSLSRNLLWNHLLIHFRE 842
Query: 749 QDCL 752
+ CL
Sbjct: 843 KGCL 846
>gi|255575790|ref|XP_002528794.1| nonsense-mediated mRNA decay protein, putative [Ricinus communis]
gi|223531797|gb|EEF33616.1| nonsense-mediated mRNA decay protein, putative [Ricinus communis]
Length = 1280
Score = 195 bits (495), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 137/430 (31%), Positives = 220/430 (51%), Gaps = 55/430 (12%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + +++ + +VLVCAPSN A+D++ ++ TG+ K+VR
Sbjct: 519 PGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGL----------KVVR 568
Query: 413 IGLKAHHSVNSVAIDHL-------------------VEQKRDD----SAADKQKHGATRK 449
+ K+ +V+S ++HL ++Q +D+ S++D++K+ A ++
Sbjct: 569 LCAKSREAVSS-PVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKR 627
Query: 450 DRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCK 509
+ I A ++C T +G L+ N F V+IDE+ QA EP L+PL G K
Sbjct: 628 ---ATEREISQSADVICCTCVGAGDPRLA--NFRFRQVLIDESTQATEPECLIPLVLGAK 682
Query: 510 QVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSRE 569
QV LVGD QL ++ A G SLF+RL G L+ QYRMHP + FPS
Sbjct: 683 QVILVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGVKPIRLQVQYRMHPSLSEFPSNS 742
Query: 570 FYDEALEDGSDVEDYTTR--DWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVL 627
FY+ L++G V + + D+ P FF + G+E A S++N E V
Sbjct: 743 FYEGTLQNGVTVNERQSSGIDFPWPVPNRPM-FFYVQMGQEEISASGTSYLNRTEAANV- 800
Query: 628 LLFHKLISMYPQLKSS---SQLAIISPYRHQVKQFQERFKETFGVESQ--KVVDITTVDG 682
K+++ + L+S SQ+ +I+PY Q + Q K +++ +VD
Sbjct: 801 ---EKIVTTF--LRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDS 855
Query: 683 CQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNL 742
QGREKD I SCVR+++ + IGFL D RR+NV +TRA+ I+++G L + WN+L
Sbjct: 856 FQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNSL 915
Query: 743 VKSAEKQDCL 752
+ ++ +CL
Sbjct: 916 LTHYKEHECL 925
>gi|156096655|ref|XP_001614361.1| regulator of nonsense transcripts [Plasmodium vivax Sal-1]
gi|148803235|gb|EDL44634.1| regulator of nonsense transcripts, putative [Plasmodium vivax]
Length = 1539
Score = 195 bits (495), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 142/459 (30%), Positives = 221/459 (48%), Gaps = 45/459 (9%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG L V + S+ +VLV APSN A+D++ +R+ TG+ K+VR
Sbjct: 841 PGTGKTLTCATLVYHLSKTKMGKVLVTAPSNVAVDQLSVRIHKTGL----------KVVR 890
Query: 413 IGLKAHHSVNSVA-------------------IDHLVEQKRDDSAADKQKHGATRKDRDS 453
+ K+ V S+A ++ L+E K + ++ +K
Sbjct: 891 LCAKSREYVPSIADYLYLHNQMKLLKSDIGEELNKLLELKEEVGELSQKDERRLKKLIFF 950
Query: 454 IRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFL 513
IL EA ++C+T + L + F V++DEA Q+ EP LVPL TG KQ+ L
Sbjct: 951 AEYKILLEADVICTTCVGAMDKRLKRFR--FSQVLVDEATQSTEPECLVPLVTGAKQIVL 1008
Query: 514 VGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDE 573
VGD QL ++ A + G G SLF+RL G L+ QYRMHP + FPS FYD
Sbjct: 1009 VGDHCQLGPIIVCKKAANAGLGKSLFERLVMLGITPFRLEVQYRMHPALSEFPSYVFYDG 1068
Query: 574 ALEDGSDVE--DYTTRD--WHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLL 629
L++G ++ +Y +D W +C P F++ G E A S++N E + L
Sbjct: 1069 CLQNGITLKEREYPLKDFPWPNPKC--PMFFYN-STGLEEMSASGTSYLNRAEASNMEKL 1125
Query: 630 FHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKD 689
LIS LK +Q+ +I+PY Q F++ + +++ +VD QGREKD
Sbjct: 1126 VRTLISC--GLK-PTQIGVITPYEGQRAYITSLFQKNISYQHSTEIEVASVDAFQGREKD 1182
Query: 690 VAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQ 749
+ SCVR++ K IGFL D RR+NV +TRAK +++ G A L +H + K
Sbjct: 1183 FILLSCVRSNKKLGIGFLNDPRRLNVALTRAKYGLIICGNAKVL--SRHHVMIKKMHNSN 1240
Query: 750 DCLFRVSKPYASFFSDENLESMRKNATTDNVQGADGHVP 788
+ + V+ + + S + + N++ + H+P
Sbjct: 1241 ETITNVNSVWINLLSQFKKKELIVEGCLSNLKPMNIHIP 1279
>gi|357482277|ref|XP_003611424.1| Regulator of nonsense transcripts-like protein [Medicago
truncatula]
gi|355512759|gb|AES94382.1| Regulator of nonsense transcripts-like protein [Medicago
truncatula]
Length = 1253
Score = 195 bits (495), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 138/429 (32%), Positives = 218/429 (50%), Gaps = 53/429 (12%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + +++ + +VLVCAPSN A+D++ ++ TG+ K+VR
Sbjct: 500 PGTGKTVTSAALVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGL----------KVVR 549
Query: 413 IGLKAHHSVNSVAIDHL-------------------VEQKRDD----SAADKQKHGATRK 449
+ K+ +V+S ++HL ++Q +D+ S++D++K+ A ++
Sbjct: 550 LCAKSREAVSS-PVEHLTLHYQVRHLDTSDKSELHKLQQLKDEQGELSSSDEKKYKALKR 608
Query: 450 DRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCK 509
+ I A ++C T +G L+ N F V+IDE+ QA EP L+PL G K
Sbjct: 609 ---ATEREISQSADVICCTCVGAGDPRLA--NFRFRQVLIDESTQATEPECLIPLVLGAK 663
Query: 510 QVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSRE 569
QV LVGD QL ++ A G SLF+RL G L+ QYRMHP + FPS
Sbjct: 664 QVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGVKPIRLQVQYRMHPCLSEFPSNS 723
Query: 570 FYDEALEDGSDV-EDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLL 628
FY+ L++G V E +T + FF + G+E A S++N E V
Sbjct: 724 FYEGTLQNGVTVNERQSTGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANV-- 781
Query: 629 LFHKLISMYPQLKSS---SQLAIISPYRHQVKQFQERFKETFGVESQ--KVVDITTVDGC 683
K+++ + LKS SQ+ +I+PY Q + Q K +++ +VD
Sbjct: 782 --EKIVTTF--LKSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSF 837
Query: 684 QGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLV 743
QGREKD I SCVR+++ + IGFL D RR+NV +TRA+ I+++G L + WN L+
Sbjct: 838 QGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLL 897
Query: 744 KSAEKQDCL 752
++ +CL
Sbjct: 898 THYKEHECL 906
>gi|356541331|ref|XP_003539131.1| PREDICTED: regulator of nonsense transcripts 1 homolog [Glycine
max]
Length = 1270
Score = 195 bits (495), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 138/430 (32%), Positives = 220/430 (51%), Gaps = 55/430 (12%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + +++ + +VLVCAPSN A+D++ ++ TG+ K+VR
Sbjct: 509 PGTGKTVTSAALVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGL----------KVVR 558
Query: 413 IGLKAHHSVNSVAIDHL-------------------VEQKRDD----SAADKQKHGATRK 449
+ K+ +V+S ++HL ++Q +D+ S++D++K+ A ++
Sbjct: 559 LCAKSREAVSS-PVEHLTLHYQVRHLDTSDKSELHKLQQLKDEQGELSSSDEKKYKALKR 617
Query: 450 DRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCK 509
+ I A ++C T +G L+ N F V+IDE+ QA EP L+PL G K
Sbjct: 618 ---ATEREISQSADVICCTCVGAGDPRLA--NFRFRQVLIDESTQATEPECLIPLVLGAK 672
Query: 510 QVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSRE 569
QV LVGD QL ++ A G SLF+RL G L+ QYRMHP + FPS
Sbjct: 673 QVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGVKPIRLQVQYRMHPCLSEFPSNS 732
Query: 570 FYDEALEDGSDVEDYTTR--DWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVL 627
FY+ L++G V + + D+ P FF + G+E A S++N E V
Sbjct: 733 FYEGTLQNGVTVNERQSSGIDFPWPVPNRPM-FFYVQMGQEEISASGTSYLNRTEAANV- 790
Query: 628 LLFHKLISMYPQLKSS---SQLAIISPYRHQVKQFQERFKETFGVESQ--KVVDITTVDG 682
K+++ + LKS SQ+ +I+PY Q + Q K +++ +VD
Sbjct: 791 ---EKIVTTF--LKSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDS 845
Query: 683 CQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNL 742
QGREKD I SCVR+++ + IGFL D RR+NV +TRA+ I+++G L + WN+L
Sbjct: 846 FQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNSL 905
Query: 743 VKSAEKQDCL 752
+ ++ +CL
Sbjct: 906 LTHYKEHECL 915
>gi|9759443|dbj|BAB10240.1| prematurely terminated mRNA decay factor-like protein [Arabidopsis
thaliana]
Length = 1235
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 136/416 (32%), Positives = 213/416 (51%), Gaps = 49/416 (11%)
Query: 365 VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNS- 423
V + +++ + +VLVCAPSN A+D++ ++ TG+ K+VR+ K+ +V+S
Sbjct: 521 VYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGL----------KVVRLCAKSREAVSSP 570
Query: 424 -------VAIDHL----------VEQKRDD----SAADKQKHGATRKDRDSIRSAILNEA 462
+ HL ++Q +D+ S++D++K+ ++ + I A
Sbjct: 571 VEYLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKNLKR---ATEREITQSA 627
Query: 463 VIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPA 522
++C T G+A L N F V+IDE+ QA EP L+PL G KQV LVGD QL
Sbjct: 628 DVICCTCV--GAADLRLSNFRFRQVLIDESTQATEPECLIPLVLGVKQVVLVGDHCQLGP 685
Query: 523 TVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDG-SDV 581
++ A G SLF+RL G L+ QYRMHP + FPS FY+ L++G + +
Sbjct: 686 VIMCKKAARAGLAQSLFERLVTLGIKPIRLQVQYRMHPALSEFPSNSFYEGTLQNGVTII 745
Query: 582 EDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLK 641
E TT + FF + G+E A S++N E V KL++ + LK
Sbjct: 746 ERQTTGIDFPWPVPNRPMFFYVQLGQEEISASGTSYLNRTEAANV----EKLVTAF--LK 799
Query: 642 SS---SQLAIISPYRHQVKQFQERFKETFGVESQ--KVVDITTVDGCQGREKDVAIFSCV 696
S SQ+ +I+PY Q + Q K +++ +VD QGREKD I SCV
Sbjct: 800 SGVVPSQIGVITPYEGQRAYIVNYMARNGSLRQQLYKEIEVASVDSFQGREKDYIILSCV 859
Query: 697 RASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
R+++ + IGFL D RR+NV +TRA+ I+++G L + WN L+ ++ +CL
Sbjct: 860 RSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECL 915
>gi|389583252|dbj|GAB65987.1| regulator of nonsense transcripts [Plasmodium cynomolgi strain B]
Length = 1470
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 141/459 (30%), Positives = 222/459 (48%), Gaps = 45/459 (9%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG L V + S+ +VLV APSN A+D++ +R+ TG+ K+VR
Sbjct: 725 PGTGKTLTCATLVYHLSKTKMGKVLVTAPSNVAVDQLSVRIHKTGL----------KVVR 774
Query: 413 IGLKAHHSVNSVA-------------------IDHLVEQKRDDSAADKQKHGATRKDRDS 453
+ K+ V S+A ++ L+E K + ++ +K
Sbjct: 775 LCAKSREYVPSIADYLYLHNQMKLLKSDIGEELNKLLELKEEVGELSQKDERRLKKLIFF 834
Query: 454 IRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFL 513
IL EA ++C+T + L + F V++DEA Q+ EP LVPL TG KQ+ L
Sbjct: 835 AEYKILLEADVICTTCVGAMDKRLKRFR--FSQVLVDEATQSTEPECLVPLVTGAKQIVL 892
Query: 514 VGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDE 573
VGD QL ++ A + G G SLF+RL G L+ QYRMHP + FPS FYD
Sbjct: 893 VGDHCQLGPIIVCKKAANAGLGKSLFERLVMLGITPFRLEVQYRMHPALSEFPSYVFYDG 952
Query: 574 ALEDGSDVE--DYTTRD--WHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLL 629
L++G ++ +Y +D W +C P F++ G E A S++N E + L
Sbjct: 953 CLQNGITLKEREYPLKDFPWPNPKC--PMFFYN-STGLEEMSASGTSYLNRAEASNMEKL 1009
Query: 630 FHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKD 689
LI+ LK +Q+ +I+PY Q F++ + +++ +VD QGREKD
Sbjct: 1010 VRTLINC--GLK-PTQIGVITPYEGQRAYITSLFQKNISYQHSTEIEVASVDAFQGREKD 1066
Query: 690 VAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQ 749
+ SCVR++ K IGFL D RR+NV +TRAK +++ G A L +H + +S
Sbjct: 1067 FILLSCVRSNKKLGIGFLNDPRRLNVALTRAKYGLIICGNAKVL--SRHHVMIKRSYNSN 1124
Query: 750 DCLFRVSKPYASFFSDENLESMRKNATTDNVQGADGHVP 788
+ + V+ + + S + + N++ + H+P
Sbjct: 1125 ETITNVNSVWINLLSQFKKKDLIVEGCLSNLKPMNIHIP 1163
>gi|19569060|gb|AAL92018.1| UPF1 [Arabidopsis thaliana]
Length = 1243
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 136/416 (32%), Positives = 213/416 (51%), Gaps = 49/416 (11%)
Query: 365 VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNS- 423
V + +++ + +VLVCAPSN A+D++ ++ TG+ K+VR+ K+ +V+S
Sbjct: 513 VYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGL----------KVVRLCAKSREAVSSP 562
Query: 424 -------VAIDHL----------VEQKRDD----SAADKQKHGATRKDRDSIRSAILNEA 462
+ HL ++Q +D+ S++D++K+ ++ + I A
Sbjct: 563 VEYLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKNLKR---ATEREITQSA 619
Query: 463 VIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPA 522
++C T G+A L N F V+IDE+ QA EP L+PL G KQV LVGD QL
Sbjct: 620 DVICCTCV--GAADLRLSNFRFRQVLIDESTQATEPECLIPLVLGVKQVVLVGDHCQLGP 677
Query: 523 TVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDG-SDV 581
++ A G SLF+RL G L+ QYRMHP + FPS FY+ L++G + +
Sbjct: 678 VIMCKKAARAGLAQSLFERLVTLGIKPIRLQVQYRMHPALSEFPSNSFYEGTLQNGVTII 737
Query: 582 EDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLK 641
E TT + FF + G+E A S++N E V KL++ + LK
Sbjct: 738 ERQTTGIDFPWPVPNRPMFFYVQLGQEEISASGTSYLNRTEAANV----EKLVTAF--LK 791
Query: 642 SS---SQLAIISPYRHQVKQFQERFKETFGVESQ--KVVDITTVDGCQGREKDVAIFSCV 696
S SQ+ +I+PY Q + Q K +++ +VD QGREKD I SCV
Sbjct: 792 SGVVPSQIGVITPYEGQRAYIVNYMARNGSLRQQLYKEIEVASVDSFQGREKDYIILSCV 851
Query: 697 RASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
R+++ + IGFL D RR+NV +TRA+ I+++G L + WN L+ ++ +CL
Sbjct: 852 RSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECL 907
>gi|30695086|ref|NP_199512.2| Regulator of nonsense transcripts 1-like protein [Arabidopsis
thaliana]
gi|88984684|sp|Q9FJR0.2|RENT1_ARATH RecName: Full=Regulator of nonsense transcripts 1 homolog; AltName:
Full=ATP-dependent helicase UPF1
gi|332008074|gb|AED95457.1| Regulator of nonsense transcripts 1-like protein [Arabidopsis
thaliana]
Length = 1254
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 136/416 (32%), Positives = 213/416 (51%), Gaps = 49/416 (11%)
Query: 365 VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNS- 423
V + +++ + +VLVCAPSN A+D++ ++ TG+ K+VR+ K+ +V+S
Sbjct: 524 VYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGL----------KVVRLCAKSREAVSSP 573
Query: 424 -------VAIDHL----------VEQKRDD----SAADKQKHGATRKDRDSIRSAILNEA 462
+ HL ++Q +D+ S++D++K+ ++ + I A
Sbjct: 574 VEYLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKNLKR---ATEREITQSA 630
Query: 463 VIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPA 522
++C T G+A L N F V+IDE+ QA EP L+PL G KQV LVGD QL
Sbjct: 631 DVICCTCV--GAADLRLSNFRFRQVLIDESTQATEPECLIPLVLGVKQVVLVGDHCQLGP 688
Query: 523 TVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDG-SDV 581
++ A G SLF+RL G L+ QYRMHP + FPS FY+ L++G + +
Sbjct: 689 VIMCKKAARAGLAQSLFERLVTLGIKPIRLQVQYRMHPALSEFPSNSFYEGTLQNGVTII 748
Query: 582 EDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLK 641
E TT + FF + G+E A S++N E V KL++ + LK
Sbjct: 749 ERQTTGIDFPWPVPNRPMFFYVQLGQEEISASGTSYLNRTEAANV----EKLVTAF--LK 802
Query: 642 SS---SQLAIISPYRHQVKQFQERFKETFGVESQ--KVVDITTVDGCQGREKDVAIFSCV 696
S SQ+ +I+PY Q + Q K +++ +VD QGREKD I SCV
Sbjct: 803 SGVVPSQIGVITPYEGQRAYIVNYMARNGSLRQQLYKEIEVASVDSFQGREKDYIILSCV 862
Query: 697 RASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
R+++ + IGFL D RR+NV +TRA+ I+++G L + WN L+ ++ +CL
Sbjct: 863 RSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECL 918
>gi|350629790|gb|EHA18163.1| hypothetical protein ASPNIDRAFT_119246 [Aspergillus niger ATCC
1015]
Length = 1071
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 132/392 (33%), Positives = 201/392 (51%), Gaps = 23/392 (5%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR--IGLKAHHS---VNSVAID-- 427
+VLVCAPSN A+D++ R+ TG++ + + + + V +G + H +N I+
Sbjct: 464 QVLVCAPSNVAVDQLCERIHRTGLKTVRVTAKSREDVESPVGFLSLHEQVRINDTNIELI 523
Query: 428 HLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVV 487
L + K + Q ++ S ILN A ++C T +G L+KL F V
Sbjct: 524 KLNQLKAELGELSSQDEKRLKQLTRSAEREILNNADVICCTCVGAGDPRLAKLK--FRTV 581
Query: 488 IIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGY 547
+IDE+ Q+ EP ++PL GCKQV LVGD QL +++ A G SLF+RL G
Sbjct: 582 LIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVILGC 641
Query: 548 PVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRD----WHEYRCFGPFSFFDI 603
L QYRMHP + FPS FY+ +L++G + RD W P F+
Sbjct: 642 SPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGISSFERLRRDVDFPWPIAD--NPMMFWS- 698
Query: 604 HEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQ-LAIISPYRHQVKQFQER 662
+ G E A S++N E V K+++ + + Q + II+PY Q
Sbjct: 699 NLGNEEISASGTSYLNRTEATNV----EKIVTRFFKAGVQPQDIGIITPYEGQRSYIVSS 754
Query: 663 FKE--TFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRA 720
+ TF E K +++ +VD QGREKD I SCVR++D + IGFL+D RR+NV +TRA
Sbjct: 755 MQANGTFKKEHYKEIEVASVDAFQGREKDFIILSCVRSNDHQGIGFLSDPRRLNVALTRA 814
Query: 721 KSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
K + ++G L + WN L++ +++ CL
Sbjct: 815 KYGLAILGNPKVLSKHPLWNCLLQHFKERHCL 846
>gi|384486429|gb|EIE78609.1| hypothetical protein RO3G_03313 [Rhizopus delemar RA 99-880]
Length = 1038
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 131/408 (32%), Positives = 211/408 (51%), Gaps = 55/408 (13%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNS----------- 423
+VLVCAPSN A+D++ ++ TG+ K+VR+ K+ ++S
Sbjct: 487 QVLVCAPSNVAVDQLAEKIHQTGL----------KVVRVTAKSREELDSPVSFLTLHEQV 536
Query: 424 ------VAIDHLVEQKRDD---SAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGS 474
V + L+ KRD SAAD++K+ A ++ + IL A ++C T +G
Sbjct: 537 QNNDTNVELQKLIHLKRDQGELSAADERKYNALKR---ACEKEILANADVICCTSVGAGD 593
Query: 475 ALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGY 534
+ ++ L F V+IDEA QA EP ++PL GCKQ LVGD QL +++ A G
Sbjct: 594 SRIANLR--FRTVLIDEATQASEPECMIPLVLGCKQAVLVGDHQQLGPIIMNKKAARAGL 651
Query: 535 GTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRD----WH 590
SLF+RL G L+ QYRMHP + FPS FY+ L++G ++ +D W
Sbjct: 652 CQSLFERLVILGIRPIRLQVQYRMHPCLSEFPSNMFYEGTLQNGITTQERIRKDIDFPWP 711
Query: 591 EYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSS---SQLA 647
P F+ + G E S++N E K+++ + +KS SQ+
Sbjct: 712 VLET--PMMFY-ANLGNEEISTSGTSYLNRTEASNC----EKIVTRF--MKSGVMPSQIG 762
Query: 648 IISPY---RHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSI 704
+++PY R + Q+ + F + + K +++ +VD QGREKD I SCVR+++ + I
Sbjct: 763 VVTPYEGQRSYIVQYMQ-FNGSLRKDLYKEIEVASVDAFQGREKDYIILSCVRSNEHQGI 821
Query: 705 GFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
GFL+D RR+NV +TRAK ++++G L W++L+ +++ CL
Sbjct: 822 GFLSDPRRLNVALTRAKYGVVILGNPKILSRHPLWHHLLVHYKEKGCL 869
>gi|221055089|ref|XP_002258683.1| regulator of nonsense transcripts [Plasmodium knowlesi strain H]
gi|193808753|emb|CAQ39455.1| regulator of nonsense transcripts, putative [Plasmodium knowlesi
strain H]
Length = 1516
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 142/450 (31%), Positives = 220/450 (48%), Gaps = 27/450 (6%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENI----RSYTP 408
P TG L V + S+ +VLV APSN A+D++ +R+ TG++ + R Y P
Sbjct: 816 PGTGKTLTCATLVYHLSKTKMGKVLVTAPSNVAVDQLSVRIHKTGLKVVRLCAKSREYVP 875
Query: 409 KIVRIGLKAHHSVNSVAID------HLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEA 462
I L H+ + + D L+E K + ++ +K IL EA
Sbjct: 876 SIADY-LYLHNQMKLIKSDIGEELNKLLELKEEVGELSQKDERRLKKLIFFAEYKILVEA 934
Query: 463 VIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPA 522
++C+T + L + F V++DEA Q+ EP LVPL TG KQ+ LVGD QL
Sbjct: 935 DVICTTCVGAMDKRLKRFR--FSQVLVDEATQSTEPECLVPLVTGAKQIVLVGDHCQLGP 992
Query: 523 TVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVE 582
++ A + G G SLF+RL G L+ QYRMHP + FPS FYD L++G ++
Sbjct: 993 IIVCKKAANAGLGKSLFERLVMLGITPFRLEVQYRMHPALSEFPSYVFYDGCLQNGITLK 1052
Query: 583 --DYTTRD--WHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYP 638
+Y +D W +C P F++ G E A S++N E + L LI+
Sbjct: 1053 EREYPLKDFPWPNPKC--PMFFYN-STGLEEMSASGTSYLNRAEASNMEKLVRTLINC-- 1107
Query: 639 QLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRA 698
LK SQ+ +I+PY Q F++ + +++ +VD QGREKD + SCVR+
Sbjct: 1108 GLK-PSQIGVITPYEGQRAYITSLFQKNISYQHSTEIEVASVDAFQGREKDFILLSCVRS 1166
Query: 699 SDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRVSKP 758
+ K IGFL D RR+NV +TRAK +++ G A L +H + K + + V+
Sbjct: 1167 NKKLGIGFLNDPRRLNVALTRAKYGLIICGNAKVL--SRHHVMIKKLHNSNETITNVNSV 1224
Query: 759 YASFFSDENLESMRKNATTDNVQGADGHVP 788
+ + S + + N++ + H+P
Sbjct: 1225 WINLLSQFKKKDLIVEGCLSNLKPMNIHIP 1254
>gi|322701174|gb|EFY92925.1| Regulator of nonsense transcripts 1 [Metarhizium acridum CQMa 102]
Length = 1083
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 140/432 (32%), Positives = 210/432 (48%), Gaps = 55/432 (12%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSV-NSVAIDHLVEQ- 432
+VLVCAPSN A+D++ R+ T + K+VR+ K+ V +SV+ L EQ
Sbjct: 494 QVLVCAPSNVAVDQLCERIHRTNL----------KVVRLTAKSREDVESSVSFLALHEQV 543
Query: 433 ---------------KRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALL 477
K D Q ++ + ILN A +VC T +G L
Sbjct: 544 RLSEHNSELVKLSQLKNDVGELSSQDEKKFKQLTKAAEREILNNADVVCCTCVGAGDPRL 603
Query: 478 SKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTS 537
SK+ F V+IDE+ Q+ EP ++PL GCKQV LVGD QL +++ A G S
Sbjct: 604 SKMK--FRNVLIDESTQSAEPECMIPLVLGCKQVVLVGDHKQLGPVIMNKKAAKAGLNQS 661
Query: 538 LFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRD----WHEYR 593
LF+RL + L TQYRMHP + FPS FYD +L++G E +D W
Sbjct: 662 LFERLIKLQLAPIRLTTQYRMHPCLSEFPSNMFYDGSLQNGITHEQRLRKDVDFPWPIAE 721
Query: 594 CFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLK-SSSQLAIISPY 652
P F+ +E +G+ S++N E V K ++ + + S++ +I+PY
Sbjct: 722 T--PMMFWSNLGNEEISTSGT-SYLNRTEASNV----EKTVTRFFKAGVKPSEIGVITPY 774
Query: 653 RHQVKQFQERFKE--TFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADY 710
Q + T+ E K V++ +VD QGREKD + SCVR+++ + IGFL+D
Sbjct: 775 EGQRSYIVTTMQNSGTYKKEYYKEVEVASVDAFQGREKDFIVLSCVRSNENQGIGFLSDP 834
Query: 711 RRMNVGITRAKSSILVVGCASTLREDKHWNNLV------------KSAEKQDCLFRVSKP 758
RR+NV +TRAK ++++G L + + W+NL+ Q CL + S+P
Sbjct: 835 RRLNVALTRAKYGLVILGNPKVLSKHELWHNLLVHFKDRKCFVEGPLTNLQACLLQFSRP 894
Query: 759 YASFFSDENLES 770
SF N +S
Sbjct: 895 KVSFRQKNNYQS 906
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 30/48 (62%), Gaps = 7/48 (14%)
Query: 241 QSWKIPGLLHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQT 288
+ W PGL + N SQ++AI + +L+K LIQGPPGTGKT T
Sbjct: 439 RKWSAPGL------PDLNQSQVDAI-KSVLQKPLSLIQGPPGTGKTVT 479
>gi|194225958|ref|XP_001498724.2| PREDICTED: probable helicase senataxin [Equus caballus]
Length = 2680
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 141/458 (30%), Positives = 219/458 (47%), Gaps = 86/458 (18%)
Query: 375 RVLVCAPSNSALDEIVLRLL---------------NTG----IRDENIRSYTPKIVRIGL 415
RVLVCAPSN+A+DE++ +++ N G +R +S ++++ L
Sbjct: 2010 RVLVCAPSNAAVDELMKKIILEFKEKCKDKKNPLGNCGDINLVRLGPEKSINNEVLKFSL 2069
Query: 416 --KAHHSVNSVAIDHLVEQKRDDSAADKQ------------------------KHGATRK 449
+ +H + H+ + R D Q K + K
Sbjct: 2070 DSQVNHRMKKDLPSHVQDMHRRKEYLDHQLDELSRQRALCRGGREVQRQELDEKIASVSK 2129
Query: 450 DRDSIRSAI--------------LNEAVIVCSTLSFSGSALLSKLNHG-----FDVVIID 490
+R + S I + E+ ++C TLS SG LL G F VI+D
Sbjct: 2130 ERQELASKIKEVQGRPQKTQNNIILESHVICCTLSTSGGLLLESAFRGQGGVPFSCVIVD 2189
Query: 491 EAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQR------ 544
EA Q+ E TL PL C ++ LVGDP QLP TVIS A+ GY S+ R +
Sbjct: 2190 EAGQSCEVETLTPLIHRCNKLILVGDPKQLPPTVISMKAQDYGYDQSMMARFYKLLEENV 2249
Query: 545 -----AGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVE-DYTTRDWHEYRCFGPF 598
+ P+ L QYRMHP++ FPS Y+++L+ E + DW F P+
Sbjct: 2250 EHNMISRLPILQLTVQYRMHPDICLFPSNYVYNKSLKTNRLTETSRCSSDWP----FQPY 2305
Query: 599 SFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQ 658
FD+ +G E + + S++N+ E+ V+ + KLI + + + II+ Y+ Q
Sbjct: 2306 LVFDVGDGSERR--DNDSYVNVQEIKLVMEII-KLIKDKRRDVTFRNIGIITHYKAQKTM 2362
Query: 659 FQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRA-SDKKSIGFLADYRRMNVGI 717
Q+ + F + VD TVD QGR+KD I +CVRA + + SIGFLA +R+NV I
Sbjct: 2363 IQKDLDKEFDGKGPAEVD--TVDAFQGRQKDCVIVTCVRANATQGSIGFLASLQRLNVTI 2420
Query: 718 TRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRV 755
TRAK S+ ++G TL +++HWN L++ A+K+ + +
Sbjct: 2421 TRAKYSLFILGHLRTLMDNEHWNELIQDAQKRGAIIKT 2458
>gi|154285820|ref|XP_001543705.1| ATP-dependent helicase NAM7 [Ajellomyces capsulatus NAm1]
gi|150407346|gb|EDN02887.1| ATP-dependent helicase NAM7 [Ajellomyces capsulatus NAm1]
Length = 1088
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 145/479 (30%), Positives = 236/479 (49%), Gaps = 58/479 (12%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR--IGLKAHH--------SVNSV 424
+VLVCAPSN A+D++ R+ TG++ + + + + V +G + H ++ V
Sbjct: 484 QVLVCAPSNVAVDQLCERIHRTGLKTVRVTAKSREDVESPVGFLSLHEQVHNNDSNIELV 543
Query: 425 AIDHLVEQKRDDSAADKQKHGATRKDRDSIRSA---ILNEAVIVCSTLSFSGSALLSKLN 481
++ L + + S+ D++K + +R+A IL+ A ++C T +G L+K
Sbjct: 544 KLNQLKAELGELSSQDEKKF------KQLVRAAEKEILSNADVICCTCVGAGDPRLAKFK 597
Query: 482 HGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKR 541
F V+IDE+ Q+ EP ++PL GCKQV LVGD QL +++ A G SLF+R
Sbjct: 598 --FRTVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFER 655
Query: 542 LQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRD----WHEYRCFGP 597
L G L QYRMHP + FPS FYD +L++G + +D W P
Sbjct: 656 LVILGCAPIRLNVQYRMHPCLSEFPSNMFYDGSLQNGVTESERLLKDVDFPWPV--AHNP 713
Query: 598 FSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMY--PQLKSSSQLAIISPYRHQ 655
F+ + G E A S++N E V K+++ + +K SS + II+PY Q
Sbjct: 714 MMFWS-NLGNEEISASGTSYLNRTEAANV----EKIVTRFFKAGVKPSS-IGIITPYEGQ 767
Query: 656 VKQFQERFKE--TFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRM 713
+ TF E K +++ +VD QGREKD + SCVR++D + IGFL+D RR+
Sbjct: 768 RSYVVSSMQATGTFKKELYKEIEVASVDAFQGREKDYIVLSCVRSNDHQGIGFLSDPRRL 827
Query: 714 NVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDC------------LFRVSKPYAS 761
NV +TRAK ++++G L + WN L+ ++++C L + S+P +
Sbjct: 828 NVALTRAKYGLVILGNPKVLSKHPLWNYLLLHFKEKNCLVEGPLSNLQVSLVQFSRPKQA 887
Query: 762 FFSDENLE---SMRKNATTDNVQGADGHVPHDDETMHYANTGDADQGQADDIDNADGDA 817
+ + + + N + V G +GH Y +TG DD+ + + A
Sbjct: 888 YRGPQRFQVAYNHASNMASGMVNGRNGH------RGDYHDTGSVASYIPDDVSSVNSSA 940
>gi|225558219|gb|EEH06503.1| ATP-dependent helicase NAM7 [Ajellomyces capsulatus G186AR]
gi|240277173|gb|EER40682.1| ATP-dependent helicase NAM7 [Ajellomyces capsulatus H143]
Length = 1071
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 145/479 (30%), Positives = 236/479 (49%), Gaps = 58/479 (12%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR--IGLKAHH--------SVNSV 424
+VLVCAPSN A+D++ R+ TG++ + + + + V +G + H ++ V
Sbjct: 467 QVLVCAPSNVAVDQLCERIHRTGLKTVRVTAKSREDVESPVGFLSLHEQVHNNDSNIELV 526
Query: 425 AIDHLVEQKRDDSAADKQKHGATRKDRDSIRSA---ILNEAVIVCSTLSFSGSALLSKLN 481
++ L + + S+ D++K + +R+A IL+ A ++C T +G L+K
Sbjct: 527 KLNQLKAELGELSSQDEKKF------KQLVRAAEKEILSNADVICCTCVGAGDPRLAKFK 580
Query: 482 HGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKR 541
F V+IDE+ Q+ EP ++PL GCKQV LVGD QL +++ A G SLF+R
Sbjct: 581 --FRTVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFER 638
Query: 542 LQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRD----WHEYRCFGP 597
L G L QYRMHP + FPS FYD +L++G + +D W P
Sbjct: 639 LVILGCAPIRLNVQYRMHPCLSEFPSNMFYDGSLQNGVTESERLLKDVDFPWPV--AHNP 696
Query: 598 FSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMY--PQLKSSSQLAIISPYRHQ 655
F+ + G E A S++N E V K+++ + +K SS + II+PY Q
Sbjct: 697 MMFWS-NLGNEEISASGTSYLNRTEAANV----EKIVTRFFKAGVKPSS-IGIITPYEGQ 750
Query: 656 VKQFQERFKE--TFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRM 713
+ TF E K +++ +VD QGREKD + SCVR++D + IGFL+D RR+
Sbjct: 751 RSYVVSSMQATGTFKKELYKEIEVASVDAFQGREKDYIVLSCVRSNDHQGIGFLSDPRRL 810
Query: 714 NVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDC------------LFRVSKPYAS 761
NV +TRAK ++++G L + WN L+ ++++C L + S+P +
Sbjct: 811 NVALTRAKYGLVILGNPKVLSKHPLWNYLLLHFKEKNCLVEGPLSNLQVSLVQFSRPKQA 870
Query: 762 FFSDENLE---SMRKNATTDNVQGADGHVPHDDETMHYANTGDADQGQADDIDNADGDA 817
+ + + + N + V G +GH Y +TG DD+ + + A
Sbjct: 871 YRGPQRFQVAYNHASNMASGMVNGRNGH------RGDYHDTGSVASYIPDDVSSVNSSA 923
>gi|74201543|dbj|BAE28409.1| unnamed protein product [Mus musculus]
Length = 1124
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 135/424 (31%), Positives = 222/424 (52%), Gaps = 45/424 (10%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + +R+ VLVCAPSN A+D++ ++ TG+ K+VR
Sbjct: 500 PGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGL----------KVVR 549
Query: 413 IGLKAHHSVNSVA-----------IDHL-----VEQKRDD----SAADKQKHGATRKDRD 452
+ K+ +++S +D + ++Q +D+ S+AD++++ A + R
Sbjct: 550 LCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSADEKRYRALK--RT 607
Query: 453 SIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVF 512
+ R ++N VI C+ + +G L+++ F ++IDE+ QA EP +VP+ G KQ+
Sbjct: 608 AERELLMNADVICCTCVG-AGDPRLAEMQ--FRSILIDESTQATEPECMVPVVLGAKQLI 664
Query: 513 LVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYD 572
LVGD QL V+ A G SLF+RL G L+ QYRMHP + +FPS FY+
Sbjct: 665 LVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYE 724
Query: 573 EALEDGSDVEDYTTR--DWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
+L++G D + D+ + P FF + +G+E + S++N E V +
Sbjct: 725 GSLQNGVTAADRVKKGFDFQWPQPDKPM-FFYVTQGQEEIASSGTSYLNRTEAANVEKIT 783
Query: 631 HKLISMYPQLKSSSQLAIISPYRHQVKQFQE--RFKETFGVESQKVVDITTVDGCQGREK 688
KL+ + Q+ II+PY Q + +F + + + V+I +VD QGREK
Sbjct: 784 TKLLKAGAK---PDQIGIITPYEGQRSYLVQYMQFSGSLYTKLYQEVEIASVDAFQGREK 840
Query: 689 DVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEK 748
D I SCVRA++ + IGFL D RR+NV +TRA+ +++VG L + WN+L+ ++
Sbjct: 841 DFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLSYYKE 900
Query: 749 QDCL 752
Q L
Sbjct: 901 QKAL 904
>gi|356497066|ref|XP_003517385.1| PREDICTED: regulator of nonsense transcripts 1 homolog [Glycine
max]
Length = 1266
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 138/430 (32%), Positives = 220/430 (51%), Gaps = 55/430 (12%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + +++ + +VLVCAPSN A+D++ ++ TG+ K+VR
Sbjct: 506 PGTGKTVTSAALVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGL----------KVVR 555
Query: 413 IGLKAHHSVNSVAIDHL-------------------VEQKRDD----SAADKQKHGATRK 449
+ K+ +V+S ++HL ++Q +D+ S++D++K+ A ++
Sbjct: 556 LCAKSREAVSS-PVEHLTLHYQVRHLDTSDKSELHKLQQLKDEQGELSSSDEKKYKALKR 614
Query: 450 DRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCK 509
+ I A ++C T +G L+ N F V+IDE+ QA EP L+PL G K
Sbjct: 615 ---ATEREISQSADVICCTCVGAGDPRLA--NFRFRQVLIDESTQATEPECLIPLVLGAK 669
Query: 510 QVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSRE 569
QV LVGD QL ++ A G SLF+RL G L+ QYRMHP + FPS
Sbjct: 670 QVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGVKPIRLQVQYRMHPCLSEFPSNS 729
Query: 570 FYDEALEDGSDVEDYTTR--DWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVL 627
FY+ L++G V + + D+ P FF + G+E A S++N E V
Sbjct: 730 FYEGTLQNGVTVNERKSSGIDFPWPVPNRPM-FFYVQMGQEEISASGTSYLNRTEAANV- 787
Query: 628 LLFHKLISMYPQLKSS---SQLAIISPYRHQVKQFQERFKETFGVESQ--KVVDITTVDG 682
K+++ + LKS SQ+ +I+PY Q + Q K +++ +VD
Sbjct: 788 ---EKIVTTF--LKSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDS 842
Query: 683 CQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNL 742
QGREKD I SCVR+++ + IGFL D RR+NV +TRA+ I+++G L + WN+L
Sbjct: 843 FQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNSL 902
Query: 743 VKSAEKQDCL 752
+ ++ +CL
Sbjct: 903 LTHYKEHECL 912
>gi|359474491|ref|XP_002279304.2| PREDICTED: regulator of nonsense transcripts 1 homolog [Vitis
vinifera]
gi|297742168|emb|CBI33955.3| unnamed protein product [Vitis vinifera]
Length = 1267
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 133/418 (31%), Positives = 216/418 (51%), Gaps = 53/418 (12%)
Query: 365 VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSV 424
V + +++ + +VLVCAPSN A+D++ ++ TG+ K+VR+ K+ +V+S
Sbjct: 509 VYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGL----------KVVRLCAKSREAVSS- 557
Query: 425 AIDHL-------------------VEQKRDD----SAADKQKHGATRKDRDSIRSAILNE 461
++HL ++Q +D+ S++D++K+ A ++ + I
Sbjct: 558 PVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKR---ATEREISQS 614
Query: 462 AVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLP 521
A ++C T +G L+ N F V+IDE+ QA EP L+PL G KQV LVGD QL
Sbjct: 615 ADVICCTCVGAGDPRLA--NFRFRQVLIDESTQATEPECLIPLVLGVKQVVLVGDHCQLG 672
Query: 522 ATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDV 581
++ A G SLF+RL G L+ QYRMHP + FPS FY+ L++G +
Sbjct: 673 PVIMCKKAARAGLAQSLFERLVLLGVKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTI 732
Query: 582 EDYTTR--DWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQ 639
+ + D+ P FF + G+E A S++N E V K+++ +
Sbjct: 733 NERQSSGIDFPWPVPNRPM-FFYVQMGQEEISASGTSYLNRTEAANV----EKIVTTF-- 785
Query: 640 LKSS---SQLAIISPYRHQVKQFQERFKETFGVESQ--KVVDITTVDGCQGREKDVAIFS 694
L+S SQ+ +I+PY Q + Q K +++ +VD QGREKD I S
Sbjct: 786 LRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILS 845
Query: 695 CVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
CVR+++ + IGFL D RR+NV +TRA+ I+++G L + WN+L+ ++ +CL
Sbjct: 846 CVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNSLLTHYKEHECL 903
>gi|281210252|gb|EFA84419.1| helicase [Polysphondylium pallidum PN500]
Length = 1113
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 136/414 (32%), Positives = 205/414 (49%), Gaps = 45/414 (10%)
Query: 365 VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSV 424
+V + + +VLVCAPSN A+D++ +L + G+ K+VR+ K V S
Sbjct: 556 IVKHAIKKNEKVLVCAPSNVAIDQLTGKLHSIGL----------KVVRLCSKLREEVAS- 604
Query: 425 AIDHLV--------------EQKRDDSAADKQKHGATRKD------RDSIRSAILNEAVI 464
++HL E + D+Q +T D + S IL EA +
Sbjct: 605 PVEHLTLHHQVWQLDSHGRGELAKFKQLKDEQGELSTNDDHRYFALKRHAESKILKEADV 664
Query: 465 VCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATV 524
+ +T +G LSKL F V+IDE+ QA EP L+PL G KQV LVGD QL +
Sbjct: 665 IATTCVGAGDPRLSKLK--FPYVLIDESTQASEPECLIPLMLGAKQVVLVGDHCQLGPVL 722
Query: 525 ISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDY 584
++ G SLF+RL G+ L TQYRMHP + FPS FY+ L + +D
Sbjct: 723 LAKKVIEAGLSQSLFERLINLGHHPFRLTTQYRMHPSLSEFPSSTFYEGQLVNELSYKDR 782
Query: 585 TTRD----WHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQL 640
D W P F++ +E +G+ S+IN E + KL+ + +
Sbjct: 783 VYNDIKFPWPSPN--NPMFFYNSTGAEEISSSGT-SFINRMEASTTEKIVTKLLELGTK- 838
Query: 641 KSSSQLAIISPYRHQVKQFQERFKET--FGVESQKVVDITTVDGCQGREKDVAIFSCVRA 698
Q+ II+PY Q ++T +E + +++ +VD QGREKD I SCVR+
Sbjct: 839 --PHQIGIITPYEGQRSFLVNNMQKTGKLSIELYREIEVASVDSFQGREKDFIILSCVRS 896
Query: 699 SDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
+D + IGFL D RR+NV +TRA+ ++++G A L D+ WNNL+ + ++ L
Sbjct: 897 NDNQGIGFLHDPRRLNVALTRARYGLIILGNARVLSRDQLWNNLICHFKSKEVL 950
>gi|440295047|gb|ELP87976.1| nonsense-mediated mRNA decay protein, putative [Entamoeba invadens
IP1]
Length = 943
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 135/396 (34%), Positives = 201/396 (50%), Gaps = 49/396 (12%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQKR 434
+VLVCAPSN A+D++ ++++TG+ K++R+ K S N D+ + +
Sbjct: 453 KVLVCAPSNIAVDQLAAKIVDTGV----------KVIRVFGKGRESENEPLYDYSLGKIV 502
Query: 435 DDSAA---DKQ---KHGATRK--------DRDSIRSAI-------LNEAVIVCSTLSFSG 473
DD A DK+ K+ A R+ D++SI + I E ++C T +G
Sbjct: 503 DDVMAQMKDKETLEKYKAFREEPEELAEADKNSILAVIRDIELKVFRECDVICCTCCVAG 562
Query: 474 SALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLG 533
L +N+ D V++DE+ QA EP LV +Q+FLVGD QL + S A G
Sbjct: 563 DRRLFGINNQIDTVLVDESTQAEEPEVLVCFMNSVRQIFLVGDHCQLGPVLNSKDARKYG 622
Query: 534 YGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYR 593
G +F RL + G+ L+ QYRMHP + F S FYD L++G T ++
Sbjct: 623 LGLPMFSRLLQLGHEPYRLQFQYRMHPALSEFSSHTFYDGVLQNG------VTALERQFN 676
Query: 594 CFGPFSF-------FDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQL 646
F F F GKES + + S++N +EV + + K+I S Q+
Sbjct: 677 SLKRFWFVQNRPMMFVATAGKESFGSTATSYLNDEEVTVIRDIIVKMIDCG---VSPEQI 733
Query: 647 AIISPYRHQVKQFQERF-KET-FGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSI 704
+I+PY Q + + R K+T GV ++I +VD QGREKD IFS VR++ I
Sbjct: 734 GVITPYIAQKQAIRVRLTKDTELGVNVMNAIEIASVDSFQGREKDFIIFSTVRSNSTNEI 793
Query: 705 GFLADYRRMNVGITRAKSSILVVGCASTLREDKHWN 740
GFL + +R+NV ITRAK ++VVG STL D W+
Sbjct: 794 GFLKNPQRLNVSITRAKYGLVVVGNPSTLSSDPLWS 829
>gi|145240145|ref|XP_001392719.1| regulator of nonsense transcripts 1 [Aspergillus niger CBS 513.88]
gi|134077233|emb|CAK45574.1| unnamed protein product [Aspergillus niger]
Length = 1072
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 132/392 (33%), Positives = 201/392 (51%), Gaps = 23/392 (5%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR--IGLKAHHS---VNSVAID-- 427
+VLVCAPSN A+D++ R+ TG++ + + + + V +G + H +N I+
Sbjct: 464 QVLVCAPSNVAVDQLCERIHRTGLKTVRVTAKSREDVESPVGFLSLHEQVRINDTNIELI 523
Query: 428 HLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVV 487
L + K + Q ++ S ILN A ++C T +G L+KL F V
Sbjct: 524 KLNQLKAELGELSSQDEKRLKQLTRSAEREILNNADVICCTCVGAGDPRLAKLK--FRTV 581
Query: 488 IIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGY 547
+IDE+ Q+ EP ++PL GCKQV LVGD QL +++ A G SLF+RL G
Sbjct: 582 LIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVILGC 641
Query: 548 PVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRD----WHEYRCFGPFSFFDI 603
L QYRMHP + FPS FY+ +L++G + RD W P F+
Sbjct: 642 SPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGISSFERLRRDVDFPWPIAD--NPMMFWS- 698
Query: 604 HEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQ-LAIISPYRHQVKQFQER 662
+ G E A S++N E V K+++ + + Q + II+PY Q
Sbjct: 699 NLGNEEISASGTSYLNRTEATNV----EKIVTRFFKAGVQPQDIGIITPYEGQRSYIVSS 754
Query: 663 FKE--TFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRA 720
+ TF E K +++ +VD QGREKD I SCVR++D + IGFL+D RR+NV +TRA
Sbjct: 755 MQANGTFKKEHYKEIEVASVDAFQGREKDFIILSCVRSNDHQGIGFLSDPRRLNVALTRA 814
Query: 721 KSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
K + ++G L + WN L++ +++ CL
Sbjct: 815 KYGLAILGNPKVLSKHPLWNCLLQHFKERHCL 846
>gi|367008616|ref|XP_003678809.1| hypothetical protein TDEL_0A02660 [Torulaspora delbrueckii]
gi|359746466|emb|CCE89598.1| hypothetical protein TDEL_0A02660 [Torulaspora delbrueckii]
Length = 908
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 137/421 (32%), Positives = 219/421 (52%), Gaps = 41/421 (9%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + S+ + R+LVCAPSN A+D + +L + G+ K+VR
Sbjct: 397 PGTGKTVTSATIVYHLSKMHNERILVCAPSNVAVDHLAAKLRDLGL----------KVVR 446
Query: 413 IGLKAHH----SVNSVAIDHLVEQK---------RDDSAADKQKHGATRKDRDSIR---S 456
+ K+ SV+++A+ +LV + R + G T+K +R S
Sbjct: 447 LTAKSREDVESSVSNLALHNLVARSSKGELKKLLRLKEEVGELSIGDTKKFVKLVRKTES 506
Query: 457 AILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGD 516
IL +A +VC T +G +L+ F V+IDE+ QA EP L+P+ G KQ+ LVGD
Sbjct: 507 EILKKADVVCCTCVGAGD---KRLDTRFRTVLIDESTQASEPECLIPIVKGAKQIILVGD 563
Query: 517 PVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALE 576
QL ++ A G SLF+RL G+ L+ QYRM+P + FPS FY+ +L+
Sbjct: 564 HQQLGPVILERKAGDAGLKQSLFERLIALGHVPLRLEVQYRMNPYLSDFPSNVFYEGSLQ 623
Query: 577 DGSDVEDYT-TRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLIS 635
+G +E T T + G F + G+E A S++N E + ++I+
Sbjct: 624 NGVTIEQRTVTNSTFPWPIHGVPMMFWANYGREEISANGTSYLNRIEA----MNCERIIT 679
Query: 636 -MYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKV---VDITTVDGCQGREKDVA 691
++ Q+ +I+PY Q + F ++ + G + + V++ +VD QGREKD
Sbjct: 680 RLFKDGVKPEQIGVITPYEGQ-RAFILQYMQMNGSLDRDLYLSVEVASVDAFQGREKDYI 738
Query: 692 IFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDC 751
I SCVRA++++ IGFL+D RR+NVG+TRAK ++++G L + WNNL+ ++ C
Sbjct: 739 ILSCVRANEQQIIGFLSDPRRLNVGLTRAKYGLVILGNPRALSTNALWNNLLIHFREKGC 798
Query: 752 L 752
L
Sbjct: 799 L 799
>gi|330918442|ref|XP_003298225.1| hypothetical protein PTT_08860 [Pyrenophora teres f. teres 0-1]
gi|311328707|gb|EFQ93678.1| hypothetical protein PTT_08860 [Pyrenophora teres f. teres 0-1]
Length = 1079
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 132/394 (33%), Positives = 207/394 (52%), Gaps = 27/394 (6%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR--IG-LKAHHSV----NSVAID 427
+VLVCAPSN A+D++ R+ TG++ + + + + V +G L H V +V ++
Sbjct: 485 QVLVCAPSNVAVDQLCERIHLTGLKTVRVTAKSREDVESPVGFLSLHEQVRMNDTNVELN 544
Query: 428 HLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVV 487
L + K D Q ++ + IL A ++C T +G LSK+ F V
Sbjct: 545 KLNQLKSDVGELSSQDEKKFKQLTRAAEREILMAADVICCTCVGAGDPRLSKMK--FRTV 602
Query: 488 IIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGY 547
+IDE+ Q+ EP ++PL GCKQV LVGD QL +++ A G SLF+RL G
Sbjct: 603 LIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAATAGLNQSLFERLVILGC 662
Query: 548 PVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRD----WHEYRCFGPFSFFDI 603
L+ QYRMHP + FPS FY+ +L++G +++ RD W P F+
Sbjct: 663 SPIRLQVQYRMHPCLSEFPSNMFYEGSLQNGVTMQERIRRDVDFPWPVVD--SPMMFWS- 719
Query: 604 HEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQ---LAIISPYRHQVKQFQ 660
+ G E A S++N E V K+++ + K+ Q + II+PY Q
Sbjct: 720 NLGAEEISASGTSYLNRTEAQNV----EKIVTRF--FKAGVQPGDIGIITPYEGQRSYVV 773
Query: 661 ERFKET--FGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGIT 718
+ T F E+ K V++ +VD QGREKD I SCVR+++ + IGFL+D RR+NV +T
Sbjct: 774 SSMQATGSFKKENYKEVEVASVDAFQGREKDFIILSCVRSNEHQGIGFLSDPRRLNVALT 833
Query: 719 RAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
RAK ++++G L + W+ L+ ++++CL
Sbjct: 834 RAKYGLVILGNPKVLSKHPLWHYLLLHFKERNCL 867
>gi|431922030|gb|ELK19203.1| Regulator of nonsense transcripts 1 [Pteropus alecto]
Length = 1087
Score = 194 bits (493), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 135/424 (31%), Positives = 222/424 (52%), Gaps = 45/424 (10%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + +R+ VLVCAPSN A+D++ ++ TG+ K+VR
Sbjct: 463 PGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGL----------KVVR 512
Query: 413 IGLKAHHSVNSVA-----------IDHL-----VEQKRDD----SAADKQKHGATRKDRD 452
+ K+ +++S +D + ++Q +D+ S+AD++++ A + R
Sbjct: 513 LCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSADEKRYRALK--RT 570
Query: 453 SIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVF 512
+ R ++N VI C+ + +G L+K+ F ++IDE+ QA EP +VP+ G KQ+
Sbjct: 571 AERELLMNADVICCTCVG-AGDPRLAKMQ--FRSILIDESTQATEPECMVPVVLGAKQLI 627
Query: 513 LVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYD 572
LVGD QL V+ A G SLF+RL G L+ QYRMHP + +FPS FY+
Sbjct: 628 LVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYE 687
Query: 573 EALEDGSDVEDYTTR--DWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
+L++G + + D+ + P FF + +G+E + S++N E V +
Sbjct: 688 GSLQNGVTAAERVKKGFDFQWPQPDKPM-FFYVTQGQEEIASSGTSYLNRTEAANVEKIT 746
Query: 631 HKLISMYPQLKSSSQLAIISPYRHQVKQFQE--RFKETFGVESQKVVDITTVDGCQGREK 688
KL+ + Q+ II+PY Q + +F + + + V+I +VD QGREK
Sbjct: 747 TKLLKAGAK---PDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREK 803
Query: 689 DVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEK 748
D I SCVRA++ + IGFL D RR+NV +TRA+ +++VG L + WN+L+ ++
Sbjct: 804 DFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKE 863
Query: 749 QDCL 752
Q L
Sbjct: 864 QKVL 867
>gi|449464902|ref|XP_004150168.1| PREDICTED: LOW QUALITY PROTEIN: regulator of nonsense transcripts 1
homolog [Cucumis sativus]
Length = 1246
Score = 194 bits (493), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 136/429 (31%), Positives = 218/429 (50%), Gaps = 53/429 (12%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + +++ + +VLVCAPSN A+D++ ++ TG+ K+VR
Sbjct: 506 PGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGL----------KVVR 555
Query: 413 IGLKAHHSVNSVAIDHL-------------------VEQKRDD----SAADKQKHGATRK 449
+ K+ +V+S ++HL ++Q +D+ S++D++K+ A ++
Sbjct: 556 LCAKSREAVSS-PVEHLTLHYQVRHLDTSERSELHKLQQLKDEQGELSSSDEKKYKALKR 614
Query: 450 DRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCK 509
+ I A ++C T +G LS N F V+IDE+ QA EP L+PL G K
Sbjct: 615 ---ATEREISQSADVICCTCVGAGDPRLS--NFRFRQVLIDESTQATEPECLIPLVLGAK 669
Query: 510 QVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSRE 569
Q LVGD QL ++ A G SLF+RL G L+ QYRMHP + FPS
Sbjct: 670 QAVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGVKPIRLQVQYRMHPSLSEFPSNS 729
Query: 570 FYDEALEDGSDV-EDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLL 628
FY+ L++G + E +T + FF + G+E A S++N E V
Sbjct: 730 FYEGTLQNGVTINERQSTGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANV-- 787
Query: 629 LFHKLISMYPQLKSS---SQLAIISPYRHQVKQFQERFKETFGVESQ--KVVDITTVDGC 683
K+++ + L+S SQ+ +I+PY Q + Q K +++ +VD
Sbjct: 788 --EKIVTTF--LRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSF 843
Query: 684 QGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLV 743
QGREKD I SCVR+++ + IGFL D RR+NV +TRA+ I+++G L + WN+L+
Sbjct: 844 QGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNSLL 903
Query: 744 KSAEKQDCL 752
++ +CL
Sbjct: 904 THYKEHECL 912
>gi|392512894|emb|CAD25885.2| INVOLVED IN mRNA DECAY CONTROL (DNA2/NAM7 HELICASE FAMILY)
[Encephalitozoon cuniculi GB-M1]
Length = 776
Score = 194 bits (493), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 130/397 (32%), Positives = 200/397 (50%), Gaps = 31/397 (7%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENI----RSYTP 408
P TG L V N R Y +VLV APSN+A+D++ L++ TG+R + R Y
Sbjct: 362 PGTGKTLVSSAIVYNLVRHYGGKVLVVAPSNTAVDQLTLKIHKTGLRVLRVMSRRREYGQ 421
Query: 409 KIVRIGLKAHHSVNSVAIDHLVEQKRDDSAADKQKHGATRKD--RDSIRSAILNEAVIVC 466
V L H ++ + ++ R D ++ + D +S++ +LN+A ++
Sbjct: 422 SDVSF-LSLHENLREL------QEGRKRKDEDHSRYDSIYNDEVNESLKKQLLNQAEVIT 474
Query: 467 STLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVIS 526
T SG + ++ F V+IDEA Q+ EP +L+PL GCK++ LVGD QL T++
Sbjct: 475 CTCVTSGQKMFNRFK--FHCVLIDEAVQSTEPLSLIPLVYGCKKLVLVGDHKQLGPTILC 532
Query: 527 PVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTT 586
G+ SLF+RL G ML QYRM ++ +PS FY+ L G
Sbjct: 533 KKVAQAGFKQSLFERLISIGVVPYMLSVQYRMDADLCEWPSEMFYNGELLTGG------- 585
Query: 587 RDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQL 646
+++ + P +FF + G+E A S++N E + + L + SQ+
Sbjct: 586 KNFCRFDLGIPVNFFYVCYGREEVSASGTSFVNQAEALYCESIIRHLFKCGV---TESQI 642
Query: 647 AIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGF 706
+I+PY Q R FG E ++I+ VDG QGREKD I S VR++ + IGF
Sbjct: 643 GVITPYEGQRSYILNRI---FGAEPGN-LEISNVDGFQGREKDFIIVSLVRSNLYQGIGF 698
Query: 707 LADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLV 743
+ D RRMNV +TRAK ++++G TL + W NL+
Sbjct: 699 VGDKRRMNVTLTRAKHGLVIIGNPMTLMKHDMWGNLL 735
>gi|224126379|ref|XP_002329539.1| predicted protein [Populus trichocarpa]
gi|222870248|gb|EEF07379.1| predicted protein [Populus trichocarpa]
Length = 1242
Score = 194 bits (493), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 137/430 (31%), Positives = 219/430 (50%), Gaps = 55/430 (12%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + +++ + +VLVCAPSN A+D++ ++ TG+ K+VR
Sbjct: 507 PGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGL----------KVVR 556
Query: 413 IGLKAHHSVNSVAIDHL-------------------VEQKRDD----SAADKQKHGATRK 449
+ K+ +V+S ++HL ++Q +D+ S++D++K+ A ++
Sbjct: 557 LCAKSREAVSS-PVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKR 615
Query: 450 DRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCK 509
+ I A ++C T +G LS N F V+IDE+ QA EP L+PL G K
Sbjct: 616 ---ATEREISQSADVICCTCGGAGDPRLS--NFRFRQVLIDESTQATEPECLIPLVLGAK 670
Query: 510 QVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSRE 569
QV VGD QL ++ A G SLF+RL G L+ QYRMHP + FPS
Sbjct: 671 QVVFVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGVKPIRLQVQYRMHPCLSEFPSNN 730
Query: 570 FYDEALEDGSDVEDYTTR--DWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVL 627
FY+ L++G V + + D+ P FF + G+E A S++N E V
Sbjct: 731 FYEGTLQNGVTVNERQSSGIDFPWPVPNRPM-FFYVQMGQEEISASGTSYLNRTEAANV- 788
Query: 628 LLFHKLISMYPQLKSS---SQLAIISPYRHQVKQFQERFKETFGVESQ--KVVDITTVDG 682
K+++ + L+S SQ+ +I+PY Q + Q K +++ +VD
Sbjct: 789 ---EKIVTTF--LRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDS 843
Query: 683 CQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNL 742
QGREKD I SCVR+++ + IGFL D RR+NV +TRA+ I+++G L + WN+L
Sbjct: 844 FQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNSL 903
Query: 743 VKSAEKQDCL 752
+ ++ +CL
Sbjct: 904 LTHYKEHECL 913
>gi|19074775|ref|NP_586281.1| INVOLVED IN mRNA DECAY CONTROL (DNA2/NAM7 HELICASE FAMILY)
[Encephalitozoon cuniculi GB-M1]
gi|449329865|gb|AGE96133.1| mRNA decay control [Encephalitozoon cuniculi]
Length = 782
Score = 194 bits (493), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 130/397 (32%), Positives = 200/397 (50%), Gaps = 31/397 (7%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENI----RSYTP 408
P TG L V N R Y +VLV APSN+A+D++ L++ TG+R + R Y
Sbjct: 368 PGTGKTLVSSAIVYNLVRHYGGKVLVVAPSNTAVDQLTLKIHKTGLRVLRVMSRRREYGQ 427
Query: 409 KIVRIGLKAHHSVNSVAIDHLVEQKRDDSAADKQKHGATRKD--RDSIRSAILNEAVIVC 466
V L H ++ + ++ R D ++ + D +S++ +LN+A ++
Sbjct: 428 SDVSF-LSLHENLREL------QEGRKRKDEDHSRYDSIYNDEVNESLKKQLLNQAEVIT 480
Query: 467 STLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVIS 526
T SG + ++ F V+IDEA Q+ EP +L+PL GCK++ LVGD QL T++
Sbjct: 481 CTCVTSGQKMFNRFK--FHCVLIDEAVQSTEPLSLIPLVYGCKKLVLVGDHKQLGPTILC 538
Query: 527 PVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTT 586
G+ SLF+RL G ML QYRM ++ +PS FY+ L G
Sbjct: 539 KKVAQAGFKQSLFERLISIGVVPYMLSVQYRMDADLCEWPSEMFYNGELLTGG------- 591
Query: 587 RDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQL 646
+++ + P +FF + G+E A S++N E + + L + SQ+
Sbjct: 592 KNFCRFDLGIPVNFFYVCYGREEVSASGTSFVNQAEALYCESIIRHLFKCGV---TESQI 648
Query: 647 AIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGF 706
+I+PY Q R FG E ++I+ VDG QGREKD I S VR++ + IGF
Sbjct: 649 GVITPYEGQRSYILNRI---FGAEPGN-LEISNVDGFQGREKDFIIVSLVRSNLYQGIGF 704
Query: 707 LADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLV 743
+ D RRMNV +TRAK ++++G TL + W NL+
Sbjct: 705 VGDKRRMNVTLTRAKHGLVIIGNPMTLMKHDMWGNLL 741
>gi|1575536|gb|AAC50771.1| regulator of nonsense transcript stability [Homo sapiens]
Length = 1118
Score = 194 bits (493), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 136/424 (32%), Positives = 222/424 (52%), Gaps = 45/424 (10%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + +R+ VLVCAPSN A+D++ ++ TG+ K+VR
Sbjct: 494 PGTGKTVTSATIVYHLARQDNGPVLVCAPSNIAVDQLTEKIHQTGL----------KVVR 543
Query: 413 IGLKAHHSVNSVA-----------IDHL-----VEQKRDD----SAADKQKHGATRKDRD 452
+ K+ +++S +D + ++Q +D+ S+AD++++ A + R
Sbjct: 544 LCPKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSADEKRYRALK--RT 601
Query: 453 SIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVF 512
+ R ++N VI C+ + +G L+K+ F ++IDE+ QA EP +VP+ G KQ+
Sbjct: 602 AERELLMNADVICCTCVG-AGDPRLAKMQ--FRSILIDESTQATEPECMVPVVLGAKQLI 658
Query: 513 LVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYD 572
LVGD QL V+ A G SLF+RL G L+ QYRMHP + +FPS FY+
Sbjct: 659 LVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYE 718
Query: 573 EALEDGSDVEDYTTR--DWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
+L++G D + D+ + P FF + +G+E + S++N E V +
Sbjct: 719 GSLQNGVTAADRVKKGFDFQWPQPDKPM-FFYVTQGQEEIASSGTSYLNRTEAANVEKIT 777
Query: 631 HKLISMYPQLKSSSQLAIISPYRHQVKQFQE--RFKETFGVESQKVVDITTVDGCQGREK 688
KL+ + Q+ II+PY Q + +F + + + V+I +VD QGREK
Sbjct: 778 TKLLKAGAK---PDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREK 834
Query: 689 DVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEK 748
D I SCVRA++ + IGFL D RR+NV +TRA+ +++VG L + WN+L+ ++
Sbjct: 835 DFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLIFYKE 894
Query: 749 QDCL 752
Q L
Sbjct: 895 QKVL 898
>gi|123508693|ref|XP_001329696.1| regulator of nonsense transcripts 1 [Trichomonas vaginalis G3]
gi|121912743|gb|EAY17561.1| regulator of nonsense transcripts 1, putative [Trichomonas
vaginalis G3]
Length = 882
Score = 194 bits (493), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 139/400 (34%), Positives = 204/400 (51%), Gaps = 39/400 (9%)
Query: 376 VLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKA-------HHSVNSVAI-- 426
VLVCAPSN+A++ + + +T + S + R ++A H+ V S+
Sbjct: 437 VLVCAPSNAAVERVTEAIASTHASVCRVISTS----RTDIEAIDDKYALHNMVYSLDCAE 492
Query: 427 -----DHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEA-VIVCSTLSFSGSALLSKL 480
D L+E+ D + D++K + R S+ + +++ A VI C+ ++ + L +K+
Sbjct: 493 SRRLNDMLIERSNRDFSEDEEKK--FKDLRKSLENRVIDAADVITCTCITSADPRLATKV 550
Query: 481 NHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFK 540
F VIIDEA QAVEP L+P+ G KQV LVGD +QL V +P G G S+ +
Sbjct: 551 ---FPTVIIDEATQAVEPEILIPIMHGSKQVCLVGDHMQLGPVVTNPKCVEAGLGNSIVQ 607
Query: 541 RLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR----DWHEYRCFG 596
RL + G + L TQYRMHP + FPS FYD L +G E T + +W +
Sbjct: 608 RLVQLGLRPQRLLTQYRMHPVLSEFPSNTFYDGELMNGIPAEKRTPQQPVFNWPKPS--F 665
Query: 597 PFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLI--SMYPQLKSSSQLAIISPYRH 654
P F++ +E S+IN E V + +L + PQ Q+ IISPY
Sbjct: 666 PLMFYNNVNNEEEISNSGTSYINAFEATIVSQIVTQLCKAGVDPQ-----QIGIISPYSG 720
Query: 655 QVKQFQERFKETFGVESQ--KVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRR 712
Q Q + S + + I +VD QG EKD I SCVR + SIGFL DYRR
Sbjct: 721 QKFYLQNFLASMATLPSSFYQRLAIASVDSFQGGEKDYIIMSCVRCNPHGSIGFLKDYRR 780
Query: 713 MNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
+NV +TRAK +++VGCA L + W NL++ ++Q L
Sbjct: 781 LNVALTRAKYGLIIVGCARVLSKSILWYNLLRHCQEQHVL 820
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 126/292 (43%), Gaps = 45/292 (15%)
Query: 15 FRFCKIILGWDYFRLVKESQERNDKNSKKVD----RGKLGLREVKDTYKDVDDYLATFEP 70
FRFC I L++E+ +N N+ +D R + + K TYKD+ DY T+
Sbjct: 179 FRFCDITP--TDMDLLEETWPKN-PNATILDLPQIRKSTTIPKTKPTYKDIRDYATTYNT 235
Query: 71 LLFEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGFHLPSVTYEADEVESISP---NDLL 127
L+ E+ D++ + R V + +G++ + T+ E+ P D
Sbjct: 236 LVKLEMDY------DKQVTESMIYRNVKINFKREGYNRFTGTFSFPISETSRPINIGDTF 289
Query: 128 LLSKEEFKEGSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLI 187
L+ ++ + T +E LL +R E DA+ + +L+ + +
Sbjct: 290 LVKCGAYEAKGSLERTLGVGEIE-----LLFIRQPTPPE------DAIFTVQLVWLDTSF 338
Query: 188 TSSVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPG 247
+ A+ K S + S + I +E + +G LP D I + G ++S + G
Sbjct: 339 VRMIGAIAKMPQSPQT-STANIIKEVI----MGHLP--DTIPTLP----GEPNRSPVVKG 387
Query: 248 LLHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHA 299
+ N SQ+ A+ L + F +IQGPPGTGKT TI L++ L A
Sbjct: 388 I------PTLNLSQVNAVSYAL-KSPFCMIQGPPGTGKTTTIAALVTRFLQA 432
>gi|449511522|ref|XP_004163978.1| PREDICTED: regulator of nonsense transcripts 1 homolog [Cucumis
sativus]
Length = 1268
Score = 194 bits (493), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 133/417 (31%), Positives = 214/417 (51%), Gaps = 51/417 (12%)
Query: 365 VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSV 424
V + +++ + +VLVCAPSN A+D++ ++ TG+ K+VR+ K+ +V+S
Sbjct: 518 VYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGL----------KVVRLCAKSREAVSS- 566
Query: 425 AIDHL-------------------VEQKRDD----SAADKQKHGATRKDRDSIRSAILNE 461
++HL ++Q +D+ S++D++K+ A ++ + I
Sbjct: 567 PVEHLTLHYQVRHLDTSERSELHKLQQLKDEQGELSSSDEKKYKALKR---ATEREISQS 623
Query: 462 AVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLP 521
A ++C T +G LS N F V+IDE+ QA EP L+PL G KQ LVGD QL
Sbjct: 624 ADVICCTCVGAGDPRLS--NFRFRQVLIDESTQATEPECLIPLVLGAKQAVLVGDHCQLG 681
Query: 522 ATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDV 581
++ A G SLF+RL G L+ QYRMHP + FPS FY+ L++G +
Sbjct: 682 PVIMCKKAARAGLAQSLFERLVLLGVKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTI 741
Query: 582 -EDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQL 640
E +T + FF + G+E A S++N E V K+++ + L
Sbjct: 742 NERQSTGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANV----EKIVTTF--L 795
Query: 641 KSS---SQLAIISPYRHQVKQFQERFKETFGVESQ--KVVDITTVDGCQGREKDVAIFSC 695
+S SQ+ +I+PY Q + Q K +++ +VD QGREKD I SC
Sbjct: 796 RSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSC 855
Query: 696 VRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
VR+++ + IGFL D RR+NV +TRA+ I+++G L + WN+L+ ++ +CL
Sbjct: 856 VRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNSLLTHYKEHECL 912
>gi|342879017|gb|EGU80294.1| hypothetical protein FOXB_09221 [Fusarium oxysporum Fo5176]
Length = 1083
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 142/427 (33%), Positives = 212/427 (49%), Gaps = 61/427 (14%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSV-NSVAIDHLVEQK 433
+VLVCAPSN A+D++ R+ TG+ K+VR+ K+ V +SV+ L EQ
Sbjct: 493 QVLVCAPSNVAVDQLCERVHRTGL----------KVVRLTAKSREDVESSVSFLALHEQV 542
Query: 434 R-------------------DDSAADKQKHGATRK--DRDSIRSAILNEAVIVCSTLSFS 472
R + S+ D++K+ K +RD ILN A +VC T +
Sbjct: 543 RMSEHNSELVKLSQLKNELGELSSQDEKKYKQLTKIAERD-----ILNNADVVCCTCVGA 597
Query: 473 GSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHL 532
G LSK+ F V+IDE+ Q+ EP ++PL GCKQV LVGD QL +++ A
Sbjct: 598 GDPRLSKMK--FRNVLIDESTQSAEPECMIPLVLGCKQVVLVGDHKQLGPVIMNKKAAKA 655
Query: 533 GYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEY 592
G SLF+RL L QYRMHP + FPS FYD +L++G E+ +D
Sbjct: 656 GLNQSLFERLVNLKLSPIRLNIQYRMHPCLSEFPSNMFYDGSLQNGVTHENRLRKDVDFP 715
Query: 593 RCFG--PFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLK-SSSQLAII 649
G P F+ + G E A S++N E V K ++ + + + + +I
Sbjct: 716 WPVGEMPMMFWS-NLGHEEISASGTSYLNRTEASNV----EKAVTRFFKAGVKPADIGVI 770
Query: 650 SPYRHQVKQFQERFKE--TFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFL 707
+PY Q + T+ E K V++ +VD QGREKD + SCVR++D + IGFL
Sbjct: 771 TPYEGQRSYIVTTMQNSGTYKKEYYKEVEVASVDAFQGREKDFIVLSCVRSNDNQGIGFL 830
Query: 708 ADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLV------------KSAEKQDCLFRV 755
+D RR+NV +TRAK ++++G L + + W+NL+ Q CL +
Sbjct: 831 SDPRRLNVALTRAKYGLVILGNPKVLSKHELWHNLLVHFKDRKCFVEGPLTNLQACLLQF 890
Query: 756 SKPYASF 762
S+P S+
Sbjct: 891 SRPKVSY 897
>gi|294881038|ref|XP_002769213.1| splicing endonuclease positive effector sen1, putative [Perkinsus
marinus ATCC 50983]
gi|239872491|gb|EER01931.1| splicing endonuclease positive effector sen1, putative [Perkinsus
marinus ATCC 50983]
Length = 2247
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 158/458 (34%), Positives = 230/458 (50%), Gaps = 79/458 (17%)
Query: 364 EVVNSSRRYRVRVLVCAPSNSALDEIVLRLLN-TGIRDENIRSYTPKIVRIGLKA---HH 419
E++ R + +LV APSN+A+DEI RLLN TG ++ K +RIG + H
Sbjct: 1621 ELLRRQTRRKFPILVSAPSNAAVDEIAARLLNATGGQNY-------KFIRIGNSSRVTHE 1673
Query: 420 SVNSVAIDHLV-------EQKRDD---------------------SAADKQK-------- 443
+V + +D +V E R+D AAD++
Sbjct: 1674 AVKGICLDAMVSEAFKQQETLRNDDYVKSRDERYAAIKALDVQIQEAADQKAVVDSLRAK 1733
Query: 444 --------HGA-------TRKDRDSIRSAILNEAVIVCSTL-SFSGSALLSKLNHG-FDV 486
H A R+ RD+I+S L A ++ TL S+ S++ L G +V
Sbjct: 1734 RRGLVEALHKARDVYKNTMRQGRDAIQSRYLRGADVLFGTLNSYGSSSVTRNLPVGRAEV 1793
Query: 487 VIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGT--SLFKRLQR 544
+IDEAAQA E A+L+PL +++ LVGDP QLPATV+S A L Y SLF++LQ
Sbjct: 1794 CLIDEAAQAHEVASLIPLRFDPQRLILVGDPQQLPATVLSMRAS-LEYNLERSLFQKLQE 1852
Query: 545 AGYPVK-MLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDI 603
A +P ML TQYRMHP + +FPS+ FY AL + V +R GP +FFD+
Sbjct: 1853 ASWPHHVMLTTQYRMHPAIAAFPSKHFYHGALVPSNSV---LSRPPFAPHMPGPMTFFDL 1909
Query: 604 HEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSS---SQLAIISPYRHQVKQFQ 660
+ +E + S N E F+ L +LIS + L +ISPY+ QV +
Sbjct: 1910 PDSEEVRRGVGRS--NPAEALFIGRLLQELISALGDKAKTLLPDGLGVISPYKQQVALLK 1967
Query: 661 ERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRA 720
++G S + +++ TVD QGREKDV + S VR+S IGF+AD RR+NV ITRA
Sbjct: 1968 RNL--SYGSLSDEWLEVGTVDSFQGREKDVIVVSTVRSSASSGIGFVADMRRLNVSITRA 2025
Query: 721 KSSILVVGCASTLRE-DKHWNNLVKSAEKQDCLFRVSK 757
K ++ +VG + L W +LV+ + + + S+
Sbjct: 2026 KRALWIVGDSQRLSSGSTEWRDLVQHCQNTNVIRDASR 2063
>gi|452824582|gb|EME31584.1| dynamin GTPase [Galdieria sulphuraria]
Length = 1012
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 134/413 (32%), Positives = 211/413 (51%), Gaps = 49/413 (11%)
Query: 369 SRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDH 428
+R+ ++LVCAPSN A+D++ ++ TG+ +VR+ K+ +V+S ++DH
Sbjct: 492 TRKCSRQILVCAPSNIAVDQLAEKISCTGL----------NVVRLCAKSREAVSS-SVDH 540
Query: 429 L-VEQKRDDSAADKQKHGATRK------------DRDSIR---------SAILNEAVIVC 466
L + QK + +++ K +RD R IL ++C
Sbjct: 541 LTLHQKLRNRSSNNPNATELVKLIQLHEELGELNERDDKRLRTLKRNFEREILESMDVIC 600
Query: 467 STLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVIS 526
T + +G ++ F V+IDEA QA EP +L+PL GCKQV VGD QL V S
Sbjct: 601 CTCTTAGDRRIAHFR--FRAVLIDEATQATEPESLLPLIHGCKQVVFVGDHCQLGPVVTS 658
Query: 527 PVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDY-- 584
A G+G SLF+RL G L QYRMHP + FPS FY+ +L++G +
Sbjct: 659 KTAAKAGFGQSLFERLVALGIRPLRLTIQYRMHPSLTEFPSNMFYEGSLQNGITAAERKP 718
Query: 585 TTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSS- 643
++ + PF FF + G E A S++N E D V K++S + LK+
Sbjct: 719 SSVSFPWPVAAKPF-FFYVQTGPEEVSASGTSFLNRVEADAV----EKIVSHF--LKNGV 771
Query: 644 --SQLAIISPYRHQVKQFQERF--KETFGVESQKVVDITTVDGCQGREKDVAIFSCVRAS 699
++ +I+PY Q + F T +E K +++ +VD QGREKD I SCVR++
Sbjct: 772 DPQRIGVITPYEGQRAFIVQHFLRSGTMRLELYKEIEVASVDAFQGREKDFIILSCVRSN 831
Query: 700 DKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
+ + IGFL+D RR+NV +TRA+ ++++G L + W L++ ++ D L
Sbjct: 832 EHQGIGFLSDPRRLNVALTRARFGLIILGNPKVLAKKWLWACLLQHCKENDVL 884
>gi|260950771|ref|XP_002619682.1| hypothetical protein CLUG_00841 [Clavispora lusitaniae ATCC 42720]
gi|238847254|gb|EEQ36718.1| hypothetical protein CLUG_00841 [Clavispora lusitaniae ATCC 42720]
Length = 967
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 134/405 (33%), Positives = 203/405 (50%), Gaps = 38/405 (9%)
Query: 370 RRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHL 429
R R RVLVCAPSN A+D + L+L G+ K+VR+ ++ + S A
Sbjct: 470 RLRRSRVLVCAPSNVAVDHLALKLRAAGL----------KVVRLAARSREDIESEATPLA 519
Query: 430 VEQ-------KRDDSAADKQKHGATRKDRDSIRSA---------ILNEAVIVCSTLSFSG 473
+ +R + DKQ G R R A +++ A ++C+T +
Sbjct: 520 LHTQVRAAIPRRVRTLVDKQASGGELDARAKARIARSWRAAEQKLISSADVICTTCVGAD 579
Query: 474 SALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLG 533
L + + F +V++DE+ QA EP L+P+ G KQV LVGD QL V+ P A G
Sbjct: 580 DRRLEE--YEFPIVLVDESTQATEPEALIPITRGAKQVVLVGDHQQLGPVVLDPAASAAG 637
Query: 534 YGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYR 593
SLF+RL G+ L+ QYRMHP + F S FY+ +L +G +D TR ++
Sbjct: 638 LRRSLFERLVSMGHVPLRLEVQYRMHPALSEFASNMFYEGSLLNGVTSDD-RTRPGADFP 696
Query: 594 CFGP--FSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISP 651
P F + GKE A S++N E V + +L+ S Q+ +I+P
Sbjct: 697 WPVPDRPMMFWANYGKEEIGANGSSYLNRVEAMNVDKIIARLVR---DGVSPDQIGVITP 753
Query: 652 YRHQVKQFQERFKETFGVESQKV----VDITTVDGCQGREKDVAIFSCVRASDKKSIGFL 707
Y Q + K V + V++++VD QGREKD I SCVRA++ + IGFL
Sbjct: 754 YEGQRVYIWQYLKLNSTVPKSALNELEVEVSSVDAFQGREKDYIILSCVRANEDRDIGFL 813
Query: 708 ADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
D RR+NV +TRAK ++++G +L ++K WN+L+ ++ CL
Sbjct: 814 KDSRRLNVALTRAKFGLIILGNPRSLSKNKLWNSLLVHYRERGCL 858
>gi|164659902|ref|XP_001731075.1| hypothetical protein MGL_2074 [Malassezia globosa CBS 7966]
gi|159104973|gb|EDP43861.1| hypothetical protein MGL_2074 [Malassezia globosa CBS 7966]
Length = 1019
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 128/386 (33%), Positives = 198/386 (51%), Gaps = 25/386 (6%)
Query: 373 RVRVLVCAPSNSALDEIVLRLLNTGIRD----ENIRSYTPKIVRIGLKAHHSVNSVA--- 425
R ++LVCAPSN A+D++ +L TG++ +R VR L H V V
Sbjct: 490 RGKILVCAPSNVAVDQLTEKLHRTGLKVVRLVSRMRETISSQVRF-LALHEQVAQVEENT 548
Query: 426 -IDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGF 484
+ HL+EQKR++ + R IL+ A ++C+T S S L ++ F
Sbjct: 549 ELSHLIEQKRNNGELSTMEERRYRSQVFQREREILDAADVICTTCSSSADRRLH--SYEF 606
Query: 485 DVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQR 544
V+IDEA QAVEP L+P+ GC+Q+ LVGD QL V++ G SLF+RL
Sbjct: 607 QTVLIDEATQAVEPECLIPIVRGCRQLVLVGDHKQLGPVVLNRKVADAGMNLSLFERLVL 666
Query: 545 AGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRD----WHEYRCFGPFSF 600
G + L+ QYRMHP + FPS FYD L++G + R+ W P F
Sbjct: 667 LGVKPRRLEVQYRMHPALSEFPSNMFYDGMLQNGVSAHERLRRNVAIPWPVPNM--PMMF 724
Query: 601 FDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQ 660
+ + G+E A S++N E V L L+ ++ + +++PY Q + F
Sbjct: 725 YQ-NLGQEEISASGTSYLNRTEASSVEKLVTTLLKAG---VAAEHIGVVTPYEGQ-RNFV 779
Query: 661 ERFKETFGV---ESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGI 717
+ + G ++ + V++ +VD QGREKD I SCVR++ IGFL+D RR+NV +
Sbjct: 780 INYMQLHGSMMKDAYRNVEVASVDAFQGREKDYIIVSCVRSNSSLGIGFLSDPRRLNVAL 839
Query: 718 TRAKSSILVVGCASTLREDKHWNNLV 743
TRA+ ++++G L ++ W +L+
Sbjct: 840 TRARFGLILIGNPRILCKNPLWYHLL 865
>gi|47216421|emb|CAG01972.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1123
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 133/424 (31%), Positives = 217/424 (51%), Gaps = 45/424 (10%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + +R+ VLVCAPSN A+D++ ++ TG+ K+VR
Sbjct: 473 PGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGL----------KVVR 522
Query: 413 IGLKAHHSVNSVA--------------------IDHLVEQKRDDSAADKQKHGATRKDRD 452
+ K+ +++S + L ++ + S++D++++ A R R
Sbjct: 523 LCAKSREAIDSPVSFLALHNQTRNMESMPELQKLQQLKDETGELSSSDEKRYRALR--RT 580
Query: 453 SIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVF 512
+ R ++N VI C+ + +G L+K+ F ++IDE+ QA EP +VP G KQ+
Sbjct: 581 AERELLMNADVICCTCVG-AGDPRLAKMQ--FRSILIDESTQATEPECMVPAVLGAKQLI 637
Query: 513 LVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYD 572
LVGD QL V+ A G SLF+RL G L+ QYRMHP + +FPS FY+
Sbjct: 638 LVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYE 697
Query: 573 EALEDGSDVEDYTTR--DWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
+L++G D + D+ + P FF + +G+E + S++N E V +
Sbjct: 698 GSLQNGVTSADRVKKGFDFQWPQPDKPM-FFYVTQGQEEIASSGTSYLNRTEAANVEKIT 756
Query: 631 HKLISMYPQLKSSSQLAIISPYRHQVKQFQE--RFKETFGVESQKVVDITTVDGCQGREK 688
+L+ + Q+ II+PY Q + +F + + + V+I +VD QGREK
Sbjct: 757 TRLLKAGAK---PDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREK 813
Query: 689 DVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEK 748
D I SCVRA++ + IGFL D RR+NV +TRA+ +++VG L + WN+L+ ++
Sbjct: 814 DFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKE 873
Query: 749 QDCL 752
Q L
Sbjct: 874 QKVL 877
>gi|330796515|ref|XP_003286312.1| hypothetical protein DICPUDRAFT_150267 [Dictyostelium purpureum]
gi|325083739|gb|EGC37184.1| hypothetical protein DICPUDRAFT_150267 [Dictyostelium purpureum]
Length = 2271
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 128/377 (33%), Positives = 206/377 (54%), Gaps = 43/377 (11%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQKR 434
++LVCAPS+ ++DEI RL+ + N+ Y+P I RIG S+ +++
Sbjct: 1420 KILVCAPSHGSVDEISRRLMKSKFYSNNMEQYSPVITRIG-----SLENIS--------- 1465
Query: 435 DDSAADKQKHGATRKDRDS-IRSAILNEAVIVCSTLSFSGSALLSKLNHGF-DVVIIDEA 492
K H ++S IR+ L I STL S SA+ + NH ++IID+A
Sbjct: 1466 ------KDIHPICLLGKESKIRANTLKNTNICLSTL--SASAMDFRRNHFIPSIIIIDDA 1517
Query: 493 AQAVEPATLVPLA--TGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVK 550
Q+ E +T++PLA + K++ LVGDPVQ ++S + G SLF+RL +A V+
Sbjct: 1518 TQSCEISTIIPLASSSNVKKLILVGDPVQSLPKILSKDSVDNGINISLFERLSKA-IDVQ 1576
Query: 551 MLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQ 610
+L TQYRMHP + F S+ FY L+D ++ T +++ + + P F+DI + +E +
Sbjct: 1577 ILDTQYRMHPSISHFSSKHFYSGKLKDSPNLIQNNTL-FNQDQKYTPLEFYDIIDSQEEK 1635
Query: 611 PAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQF---QERFKETF 667
GS N E++ V + KL+ P+LK + + II+PY+ Q + ++ F +
Sbjct: 1636 CFGSIK--NESEIETVFRIIKKLVQDNPKLKELT-IGIITPYKLQRNELILSKKYFNQPI 1692
Query: 668 GVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVV 727
+E I T+DG G EKD+ IFSCVR+ + +GFL D ++N+ ITRAK + ++
Sbjct: 1693 DIE------INTIDGFHGVEKDIIIFSCVRS---ERLGFLNDKSQINIAITRAKYGLFII 1743
Query: 728 GCASTLREDKHWNNLVK 744
G + L +D W+ L+K
Sbjct: 1744 GNKNLLEKDTIWSQLIK 1760
>gi|303320095|ref|XP_003070047.1| nonsense transcript regulator, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|240109733|gb|EER27902.1| nonsense transcript regulator, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|320031876|gb|EFW13833.1| ATP-dependent helicase NAM7 [Coccidioides posadasii str. Silveira]
gi|392865836|gb|EAS31677.2| ATP-dependent helicase NAM7 [Coccidioides immitis RS]
Length = 1101
Score = 193 bits (491), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 136/405 (33%), Positives = 206/405 (50%), Gaps = 49/405 (12%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLV--EQ 432
+VLVCAPSN A+D++ + TG+ K VR+ K+ V S + HL EQ
Sbjct: 494 QVLVCAPSNVAVDQLCECIHRTGL----------KTVRVTAKSREDVES-PVRHLSLHEQ 542
Query: 433 KRD-DSAADKQKHGATRKDRDSIRSA---------------ILNEAVIVCSTLSFSGSAL 476
R+ DS + K + D + S IL+ A ++C T +G
Sbjct: 543 VRNNDSNVELMKLTQLKNDMGELSSQDEKKFKQLTRAAEKEILSNADVICCTCVGAGDPR 602
Query: 477 LSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGT 536
L+K F V+IDE+ Q+ EP ++PL GCKQV LVGD +QL +++ A G
Sbjct: 603 LAKFK--FRTVLIDESTQSSEPECMIPLVMGCKQVVLVGDHLQLGPVIMNKKAAKAGLNQ 660
Query: 537 SLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRD----WHEY 592
SLF+RL G L QYRMHP + +FPS FY+ +L++G +D +D W
Sbjct: 661 SLFERLVILGCAPIRLNVQYRMHPCLSAFPSNMFYEGSLQNGVTSDDRLLKDVDFPWPVA 720
Query: 593 RCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLK-SSSQLAIISP 651
P F+ + G E A S++N E V K+++ + + S + II+P
Sbjct: 721 D--KPMMFWS-NLGNEEISASGTSYLNRTEAANV----EKIVTRFFKAGVKPSAIGIITP 773
Query: 652 YRHQ----VKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFL 707
Y Q V Q T+ E+ K +++ +VD QGREKD + SCVR++D + IGFL
Sbjct: 774 YEGQRSYVVSSMQ--LNGTYKKEAYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGFL 831
Query: 708 ADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
+D RR+NV +TRAK ++++G L + WN L++ ++ +CL
Sbjct: 832 SDPRRLNVALTRAKYGLVILGNPKVLSKHPLWNYLLRHFKEGNCL 876
>gi|429860740|gb|ELA35464.1| ATP-dependent helicase nam7 [Colletotrichum gloeosporioides Nara
gc5]
Length = 1088
Score = 193 bits (491), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 136/402 (33%), Positives = 205/402 (50%), Gaps = 43/402 (10%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSV-NSVAIDHLVEQK 433
+VLVCAPSN A+D++ R+ TG+ K+VR+ K+ V +SV+ L EQ
Sbjct: 494 QVLVCAPSNVAVDQLCERIHRTGL----------KVVRLTAKSREDVESSVSFLALHEQV 543
Query: 434 R-DDSAADKQKHGATRKDRDSIRSA---------------ILNEAVIVCSTLSFSGSALL 477
R +DS + K + + + S IL+ A +VC T +G L
Sbjct: 544 RMNDSNGELVKLAQLKSELGELSSQDEKKFKQLTKAAERDILHNADVVCCTCVGAGDPRL 603
Query: 478 SKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTS 537
SK+ F V+IDE+ Q+ EP ++PL GCKQV LVGD QL +++ A G S
Sbjct: 604 SKMK--FRNVLIDESTQSAEPECMIPLVLGCKQVVLVGDHKQLGPVIMNKKAAKAGLNQS 661
Query: 538 LFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRD----WHEYR 593
LF+RL L QYRMHP + FPS FYD +L++G + RD W
Sbjct: 662 LFERLVNLRLVPIRLNIQYRMHPCLSEFPSNMFYDGSLQNGVTHRERLRRDVDFPWPVAD 721
Query: 594 CFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLK-SSSQLAIISPY 652
P F+ + G E A S++N E V K+++ + + + +I+PY
Sbjct: 722 M--PMMFWS-NLGNEEISASGTSYLNRTEASNV----EKVVTRFFKAGVKPGDIGVITPY 774
Query: 653 RHQVKQFQERFKE--TFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADY 710
Q + TF ES K V++ +VD QGREKD + SCVR++D + IGFL+D
Sbjct: 775 EGQRSYIVSTMQNTGTFKKESYKEVEVASVDAFQGREKDFIVLSCVRSNDNQGIGFLSDP 834
Query: 711 RRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
RR+NV +TRAK ++++G L + + W++L+ +++ CL
Sbjct: 835 RRLNVALTRAKYGLVIIGNPKVLSKHELWHHLLVHFKERKCL 876
>gi|261201590|ref|XP_002628009.1| ATP-dependent helicase NAM7 [Ajellomyces dermatitidis SLH14081]
gi|239590106|gb|EEQ72687.1| ATP-dependent helicase NAM7 [Ajellomyces dermatitidis SLH14081]
gi|239611816|gb|EEQ88803.1| ATP-dependent helicase NAM7 [Ajellomyces dermatitidis ER-3]
gi|327352930|gb|EGE81787.1| ATP-dependent helicase NAM7 [Ajellomyces dermatitidis ATCC 18188]
Length = 1092
Score = 193 bits (491), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 132/399 (33%), Positives = 210/399 (52%), Gaps = 37/399 (9%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR--IGLKAHH--------SVNSV 424
+VLVCAPSN A+D++ R+ TG++ + + + + V +G + H ++ V
Sbjct: 488 QVLVCAPSNVAVDQLCERIHRTGLKTVRVTAKSREDVESPVGFLSLHEQVHNNDSNIELV 547
Query: 425 AIDHLVEQKRDDSAADKQKHGATRKDRDSIRSA---ILNEAVIVCSTLSFSGSALLSKLN 481
++ L + + S+ D++K + +R+A IL+ A ++C T +G L+K
Sbjct: 548 KLNQLKAELGELSSQDEKKF------KQLVRAAEKEILSNADVICCTCVGAGDPRLAKFK 601
Query: 482 HGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKR 541
F V+IDE+ Q+ EP ++PL GCKQV LVGD QL +++ A G SLF+R
Sbjct: 602 --FRTVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFER 659
Query: 542 LQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRD----WHEYRCFGP 597
L G L QYRMHP + FPS FYD +L++G + +D W P
Sbjct: 660 LVILGCAPIRLNVQYRMHPCLSEFPSNMFYDGSLQNGVTESERLLKDVDFPWP--VAHNP 717
Query: 598 FSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMY--PQLKSSSQLAIISPYRHQ 655
F+ + G E A S++N E V K+++ + +K SS + II+PY Q
Sbjct: 718 MMFWS-NLGNEEISASGTSYLNRTEAANV----EKIVTRFFKAGVKPSS-IGIITPYEGQ 771
Query: 656 VKQFQERFKE--TFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRM 713
+ TF E K +++ +VD QGREKD + SCVR++D + IGFL+D RR+
Sbjct: 772 RSYVVSSMQATGTFKKELYKEIEVASVDAFQGREKDYIVLSCVRSNDHQGIGFLSDPRRL 831
Query: 714 NVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
NV +TRAK ++++G L + WN L+ ++++CL
Sbjct: 832 NVALTRAKYGLVILGNPKVLSKHPLWNYLLLHFKEKNCL 870
>gi|47087327|ref|NP_998639.1| regulator of nonsense transcripts 1 [Danio rerio]
gi|28278858|gb|AAH45353.1| Upf1 regulator of nonsense transcripts homolog (yeast) [Danio
rerio]
gi|240248221|emb|CAX18770.1| UPF1 regulator of nonsense transcripts homolog (yeast) [Danio
rerio]
Length = 1100
Score = 193 bits (491), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 131/412 (31%), Positives = 218/412 (52%), Gaps = 43/412 (10%)
Query: 365 VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSV 424
V + +R+ VLVCAPSN A+D++ ++ TG+ K+VR+ K+ +++S
Sbjct: 486 VYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGL----------KVVRLCAKSREAIDSP 535
Query: 425 A-----------IDHL-----VEQKRDD----SAADKQKHGATRKDRDSIRSAILNEAVI 464
+D + ++Q +D+ S++D++++ A + R + R ++N VI
Sbjct: 536 VSFLALHNQIRNMDSMPELQKLQQLKDETGELSSSDEKRYRALK--RTAERELLMNADVI 593
Query: 465 VCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATV 524
C+ + +G L+K+ F ++IDE+ QA EP +VP+ G KQ+ LVGD QL V
Sbjct: 594 CCTCVG-AGDPRLAKMQ--FRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVV 650
Query: 525 ISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDY 584
+ A G SLF+RL G L+ QYRMHP + +FPS FY+ +L++G D
Sbjct: 651 MCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADR 710
Query: 585 TTR--DWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKS 642
+ D+ + P FF + +G+E + S++N E V + +L+ +
Sbjct: 711 LKKGFDFQWPQPDKPM-FFYVTQGQEEIASSGTSYLNRTEAANVEKITTRLLKAGAK--- 766
Query: 643 SSQLAIISPYRHQVKQFQE--RFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASD 700
Q+ II+PY Q + +F + + + V+I +VD QGREKD I SCVRA++
Sbjct: 767 PDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANE 826
Query: 701 KKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
+ IGFL D RR+NV +TRA+ +++VG L + WN+L+ ++Q L
Sbjct: 827 HQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVL 878
>gi|402085799|gb|EJT80697.1| regulator-nonsense transcripts 1 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 1097
Score = 193 bits (491), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 140/443 (31%), Positives = 217/443 (48%), Gaps = 55/443 (12%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSV-NSVAIDHLVEQK 433
+VLVCAPSN A+D++ R+ TG+ K+VR+ K+ V +SV+ L EQ
Sbjct: 498 QVLVCAPSNVAVDQLCERVHRTGL----------KVVRLTAKSREDVESSVSFLALHEQV 547
Query: 434 R-DDSAADKQKHGATRKDRDSIRSA---------------ILNEAVIVCSTLSFSGSALL 477
R +D+ + K + + + S IL A +VC T +G L
Sbjct: 548 RMNDTNPELAKLQQLKSELGELSSQDEKKFKQLTKAAEREILGNADVVCCTCVGAGDPRL 607
Query: 478 SKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTS 537
+K+ F V+IDE+ Q+ EP ++PL GCKQV LVGD QL +++ A G S
Sbjct: 608 AKMK--FRNVLIDESTQSAEPECMIPLVLGCKQVVLVGDHKQLGPVIMNKKAAKAGLNQS 665
Query: 538 LFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFG- 596
LF+RL + L QYRMHP + FPS FY+ +L++G ++ RD G
Sbjct: 666 LFERLVKLNLTPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGVTIQQRLRRDVDFPWPVGD 725
Query: 597 -PFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLK-SSSQLAIISPYRH 654
P F+ + G E A S++N E V K+++ + + + +I+PY
Sbjct: 726 MPMMFWS-NLGNEEISASGTSYLNRTEASNV----EKIVTRFFKAGVKPGDIGVITPYEG 780
Query: 655 QVKQFQERFKE--TFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRR 712
Q + TF ES K V++ +VD QGREKD + SCVR+++ + IGFL+D RR
Sbjct: 781 QRSYIVSTMQNTGTFKKESYKEVEVASVDAFQGREKDFIVLSCVRSNENQGIGFLSDPRR 840
Query: 713 MNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDC------------LFRVSKPYA 760
+NV +TRAK ++++G L + + W++L+ + C L + +P
Sbjct: 841 LNVALTRAKYGVVIIGNPKVLSKHELWHHLLVHFRDRKCLVDGPLTNLQTSLLQFGRPRQ 900
Query: 761 SF----FSDENLESMRKNATTDN 779
SF F+ +N + NA N
Sbjct: 901 SFRPARFTQQNQQYAPSNAGFAN 923
>gi|401827897|ref|XP_003888241.1| superfamily I DNA/RNA helicase [Encephalitozoon hellem ATCC 50504]
gi|392999441|gb|AFM99260.1| superfamily I DNA/RNA helicase [Encephalitozoon hellem ATCC 50504]
Length = 771
Score = 193 bits (491), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 129/396 (32%), Positives = 205/396 (51%), Gaps = 26/396 (6%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG L V N + Y +VLV APSN+A+D++ L++ TG++ + S + +
Sbjct: 354 PGTGKTLVSSAIVYNFVKHYGGKVLVVAPSNTAVDQLTLKIHKTGLKVLRVMSRRRECGQ 413
Query: 413 IG---LKAHHSVNSVAIDHLVEQKRDDSAADKQKHGATRKDR--DSIRSAILNEAVIVCS 467
L H ++ + +K+D++ D ++ + D +S+R +LN+A ++
Sbjct: 414 SDVSFLSLHENLKELQEGR---KKKDEACRDNGRYSSIYNDEASESLRKQLLNQAEVITC 470
Query: 468 TLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISP 527
T SG + +K F V+IDEA Q+ EP +L+PL GCK++ LVGD QL T++
Sbjct: 471 TCVTSGQKMFNKFR--FHYVLIDEAVQSTEPLSLIPLVYGCKKLVLVGDHKQLGPTILCK 528
Query: 528 VAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR 587
G+ SLF+RL G +L QYRM ++ +PS FY+ L G +
Sbjct: 529 KVAQAGFKQSLFERLISIGVVPYVLSVQYRMDTDLCEWPSEMFYNGELLTGG-------K 581
Query: 588 DWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLA 647
+ + P +FF + G+E A S+IN E + + L + + SQ+
Sbjct: 582 GFCRFDLGIPTNFFYVCYGREEVSASGTSFINQAEALYCESIIRHL---FKCGVTESQIG 638
Query: 648 IISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFL 707
+I+PY Q R FG E ++I+ VDG QGREKD I S VR++ + IGF+
Sbjct: 639 VITPYEGQRSYILNRI---FGAEPGN-LEISNVDGFQGREKDFIIVSLVRSNLYQGIGFV 694
Query: 708 ADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLV 743
D RRMNV +TRAK ++++G +TL + W+NL+
Sbjct: 695 GDKRRMNVTLTRAKHGLVIIGNPTTLMKHDIWSNLL 730
>gi|302306557|ref|NP_982968.4| ABR022Cp [Ashbya gossypii ATCC 10895]
gi|299788573|gb|AAS50792.4| ABR022Cp [Ashbya gossypii ATCC 10895]
gi|374106171|gb|AEY95081.1| FABR022Cp [Ashbya gossypii FDAG1]
Length = 999
Score = 193 bits (491), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 143/453 (31%), Positives = 231/453 (50%), Gaps = 47/453 (10%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + S+ ++ RVLVCAPSN A+D + +L + G+ K+VR
Sbjct: 440 PGTGKTVTSATIVYHLSKMHKERVLVCAPSNVAVDHLAAKLRDMGL----------KVVR 489
Query: 413 IGLKAHH----SVNSVAIDHLV------EQKRDDSAADKQKHGATRKDRDSIR------S 456
+ K+ SV+ +A+ +LV E K+ D+ + + R ++ S
Sbjct: 490 LTAKSREDVESSVSDLALHNLVARSSRGELKKLLKLKDEVGELSVKDTRSFVKLVRKTES 549
Query: 457 AILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGD 516
IL +A +VC T +G +L+ F V+IDE+ QA EP L+P+ G KQV LVGD
Sbjct: 550 TILKKADVVCCTCVGAGD---KRLDSKFRTVLIDESTQASEPECLIPIIKGAKQVVLVGD 606
Query: 517 PVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALE 576
QL ++ A G SLF+RL G+ L+ QYRM+P + FPS FY+ L+
Sbjct: 607 HQQLGPVILDRNAGDAGLKQSLFERLISLGHVPIRLEVQYRMNPYLSEFPSNMFYEGTLQ 666
Query: 577 DGSDVEDYTTRD----WHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHK 632
+G VE T D W C P F+ + G+E A S++N E + +
Sbjct: 667 NGVTVEQRTVVDSSFPWP--ICDIPMMFW-ANYGREEISANGTSYLNRIEA----INCER 719
Query: 633 LIS-MYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKV---VDITTVDGCQGREK 688
+I+ ++ Q+ +++PY Q + + ++ + G + + V++ +VD QGREK
Sbjct: 720 IITRLFKDGVKPEQIGVVTPYEGQ-RAYIIQYMQMNGSMDKDLYMTVEVASVDAFQGREK 778
Query: 689 DVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEK 748
D I SCVRA+D++SIGFL D RR+NV +TRAK + ++G ++L + WN+L+ +
Sbjct: 779 DYIILSCVRANDQQSIGFLTDPRRLNVALTRAKYGLAILGNPASLCRNSIWNHLLIHFRE 838
Query: 749 QDCLFRVSKPYASFFSDENLESMRKNATTDNVQ 781
+ CL + + + S N+ +D+ Q
Sbjct: 839 KGCLVEGTMDNLQLCTMQLTRSKNVNSNSDSRQ 871
>gi|341881801|gb|EGT37736.1| hypothetical protein CAEBREN_04117 [Caenorhabditis brenneri]
Length = 1054
Score = 193 bits (491), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 139/399 (34%), Positives = 203/399 (50%), Gaps = 38/399 (9%)
Query: 376 VLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAH-HSVNSVAIDHLVEQKR 434
VLVC+PSN A+D + ++ TG+ K+VR+ K+ H+ ++ L Q +
Sbjct: 486 VLVCSPSNIAVDHLAEKIHKTGL----------KVVRLTAKSREHTDTTIPYLTLQHQLK 535
Query: 435 DDSAADKQKHGATRKD------RDSIRSA---------ILNEAVIVCSTLSFSGSALLSK 479
+ + +K +++ +D IR + +L A ++C T S + A L+K
Sbjct: 536 VMAGPELRKLIQLKEEIGELEAKDDIRYSQLKRVKEHDLLAAADVICCTCSSAADARLTK 595
Query: 480 LNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLF 539
+ V+IDE+ QA EP LV + G +Q+ LVGD QL VI A G SLF
Sbjct: 596 IR--TRTVLIDESTQATEPEILVSIVRGVRQLVLVGDHCQLGPVVICKKAAMAGLSQSLF 653
Query: 540 KRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR--DWHEYRCFGP 597
+RL G L+ QYRMHP + FPS FYD +L++G D + DWH +
Sbjct: 654 ERLVLLGIRPFRLQVQYRMHPVLSEFPSNAFYDGSLQNGVTENDRYMKGVDWH-WPTHNK 712
Query: 598 FSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVK 657
+FF G E A S++N E V L KLI Q Q+ +I+PY Q +
Sbjct: 713 PAFFWHCSGAEELSASGTSFLNRTEAANVEKLVSKLIKGGVQ---PLQIGVITPYEGQ-R 768
Query: 658 QFQERFKETFGVESQKV---VDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMN 714
F + T G + K+ V+I +VD QGREKD I +CVR++D IGFL+D RR+N
Sbjct: 769 SFIVNYMHTQGTLNSKLYESVEIASVDAFQGREKDYIIVTCVRSNDALGIGFLSDPRRLN 828
Query: 715 VGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLF 753
V ITRAK ++VVG A L + W L+ +K+D L+
Sbjct: 829 VAITRAKYGMVVVGNAKVLSRHELWYELINHFKKKDMLY 867
>gi|300708470|ref|XP_002996413.1| hypothetical protein NCER_100487 [Nosema ceranae BRL01]
gi|239605714|gb|EEQ82742.1| hypothetical protein NCER_100487 [Nosema ceranae BRL01]
Length = 683
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 124/399 (31%), Positives = 208/399 (52%), Gaps = 32/399 (8%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG L V N ++++ +VLV APSN+A+D++ L++ TG+ K++R
Sbjct: 312 PGTGKTLVSAAIVYNYIKKFKGKVLVVAPSNTAVDQLTLKVHKTGL----------KVIR 361
Query: 413 I-GLKAHHSVNSVAIDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSF 471
+ + ++ + V L E +D + + +D ++I+ +LN+A ++ T
Sbjct: 362 VMSRRREYTQSDVNFLSLHENVKD---LQTMCNMSDEEDEENIKKRLLNQADVITCTCVT 418
Query: 472 SGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEH 531
+G + +K+ F V++DEA Q+ EP ++PL GC ++ LVGD QL T++
Sbjct: 419 AGQKMFNKMK--FSCVLVDEAVQSTEPLNIIPLVYGCTKLILVGDHKQLGPTILCKKVAK 476
Query: 532 LGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHE 591
G+ SLF+RL G +L QYRMH ++ +PS FY+ L+ G+ R +++
Sbjct: 477 AGFKQSLFERLILLGISPYILSLQYRMHADLCEWPSETFYNGELQTGN-------RLFYK 529
Query: 592 YRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISP 651
P +FF GKE S++N E + + L + + Q+ +I+P
Sbjct: 530 LNIGIPHNFFYACYGKEEVSTSGTSFVNPMEALYCESIIRHL---FKSGITEKQIGVITP 586
Query: 652 YRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYR 711
Y Q R FG E ++I+ VDG QGREKD I S VR++ + IGF+ D R
Sbjct: 587 YEGQRSHILNRI---FGSEPGN-LEISNVDGFQGREKDYIIVSLVRSNLYQGIGFVGDKR 642
Query: 712 RMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQD 750
RMNV +TRAK ++++G +T+ + W +L++ EK+D
Sbjct: 643 RMNVALTRAKHGLIIIGNPNTMIKHDAWKSLLEFYEKKD 681
>gi|448531806|ref|XP_003870332.1| Nam7 protein [Candida orthopsilosis Co 90-125]
gi|380354686|emb|CCG24202.1| Nam7 protein [Candida orthopsilosis]
Length = 1014
Score = 193 bits (490), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 143/419 (34%), Positives = 213/419 (50%), Gaps = 34/419 (8%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + SR + ++LVCAPSN A+D + +L + G+ + + + + V
Sbjct: 460 PGTGKTVTSATIVYHLSRLNKEKILVCAPSNVAVDHLAAKLDSLGLNVVRLTAKSREDVE 519
Query: 413 IG---LKAHHSVNSVA---IDHLVEQKRDD---SAADKQKHGATRKDRDSIRSAILNEAV 463
L H+ VN A + L++ K + SA D +K+ K S ILN+
Sbjct: 520 SSVSHLALHNIVNKTAKGELKKLIKLKNEVGELSAEDSKKY---IKHLRSSELKILNKCD 576
Query: 464 IVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPAT 523
+VC T + LS+ F V++DE+ QA EP L+P+ G KQV LVGD QL
Sbjct: 577 VVCCTCVGAADKRLSQFK--FRTVLVDESTQASEPEVLIPIVKGAKQVILVGDHQQLGPV 634
Query: 524 VISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVED 583
++ A G SLF+RL G+ L+ QYRMHP + FPS FY+ +L+DG D
Sbjct: 635 ILDRKAADAGLKQSLFERLVFLGHVPIRLEVQYRMHPCLSEFPSNMFYEGSLQDGVTNAD 694
Query: 584 YTTRD----WHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLI--SMY 637
D W P F+ + G+E + S++N E V + +L +
Sbjct: 695 RVVADSSFPWPVIDT--PMMFW-ANYGREELSSSGNSYLNRVEAMNVERIITRLFKDGIK 751
Query: 638 PQLKSSSQLAIISPYRHQ---VKQFQERFKETFGVESQKV-VDITTVDGCQGREKDVAIF 693
P+ Q+ +I+PY Q + QF + + V+IT+VD QGREKD I
Sbjct: 752 PE-----QIGVITPYEGQRAYLVQFMSMNSTLLNKRDEYLEVEITSVDAFQGREKDFIIL 806
Query: 694 SCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
SCVRA+D +SIGFL+D RR+NV +TRAK +LV+G L ++ WN+L+ ++ CL
Sbjct: 807 SCVRANDTQSIGFLSDPRRLNVALTRAKYGLLVLGNPRALSRNRLWNHLLVHFREKGCL 865
>gi|358395794|gb|EHK45181.1| hypothetical protein TRIATDRAFT_243374 [Trichoderma atroviride IMI
206040]
Length = 1083
Score = 193 bits (490), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 136/434 (31%), Positives = 213/434 (49%), Gaps = 41/434 (9%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLK----------AHHSVNSV 424
+VLVCAPSN A+D++ R+ TG++ + + + + V + + H+ V
Sbjct: 493 QVLVCAPSNVAVDQLCERIHRTGLKVVRLTAKSREDVESSVTFLALHEQVRMSEHNTELV 552
Query: 425 AIDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGF 484
+ L + + S+ D++K R+ + IL+ A ++C T +G LSK+ F
Sbjct: 553 KLSQLKNEVGELSSQDEKK---LRQLTKAAEREILSNADVICCTCVGAGDPRLSKMK--F 607
Query: 485 DVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQR 544
V+IDE+ Q+ EP ++PL GCKQV LVGD QL +++ A G SLF+RL
Sbjct: 608 RNVLIDESTQSAEPECMIPLVLGCKQVVLVGDHKQLGPVIMNKKAAKAGLNRSLFERLIN 667
Query: 545 AGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRD----WHEYRCFGPFSF 600
LKTQYRMHP + FPS FYD L++G E +D W P F
Sbjct: 668 LKINPIPLKTQYRMHPCLSEFPSNMFYDGTLQNGITHEQRVRKDVDFPWPVTEM--PMMF 725
Query: 601 FDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLK-SSSQLAIISPYRHQVKQF 659
+ + G E S++N E V K ++ + + S++ +I+PY Q
Sbjct: 726 WS-NIGHEEISTSGTSYLNRTEASNV----EKTVTRFFKAGVRPSEIGVITPYEGQRSYI 780
Query: 660 QERFKE--TFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGI 717
+ T+ E K V++ +VD QGREKD + SCVR++D + IGFL+D RR+NV +
Sbjct: 781 VSTMQNSGTYKKEMYKDVEVASVDAFQGREKDFIVLSCVRSNDNQGIGFLSDPRRLNVAL 840
Query: 718 TRAKSSILVVGCASTLREDKHWNNLVKS------------AEKQDCLFRVSKPYASFFSD 765
TRAK ++++G L + + W+NL+ Q CL + S+P S+
Sbjct: 841 TRAKYGLVILGNPKVLSKHELWHNLLAHFKDRKCFVEGPLTNLQACLLQFSRPRVSYRQR 900
Query: 766 ENLESMRKNATTDN 779
+ S +A N
Sbjct: 901 SSQPSQYPSARQSN 914
>gi|378734810|gb|EHY61269.1| regulator-nonsense transcripts 1 [Exophiala dermatitidis
NIH/UT8656]
Length = 1076
Score = 193 bits (490), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 138/406 (33%), Positives = 206/406 (50%), Gaps = 51/406 (12%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSV-NSVAIDHLVEQK 433
+VLVCAPSN A+D++ R+ TG+ K VR+ K+ V +SV+ L EQ
Sbjct: 485 QVLVCAPSNVAVDQLCERIHRTGL----------KTVRVTAKSREDVESSVSFLSLHEQV 534
Query: 434 R-DDSAADKQKHGATRKDRDSIRSA---------------ILNEAVIVCSTLSFSGSALL 477
R +DS + K + + + S IL A ++C T +G L
Sbjct: 535 RMNDSNVELAKLNQLKSELGELSSQDEKKYKSLTRAAEREILTNADVICCTCVGAGDPRL 594
Query: 478 SKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTS 537
+K F V+IDE+ Q+ EP ++PL GCKQV LVGD QL +++ A G S
Sbjct: 595 AKFK--FRTVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQS 652
Query: 538 LFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRD----WHEYR 593
LF+RL G L QYRMHP + FPS FY+ +L++G ++D D W
Sbjct: 653 LFERLVILGCAPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGVTMQDRLRPDVDFPWPVAD 712
Query: 594 CFGPFSFFDIHEGKESQPAGSGSWINIDE---VDFVLLLFHKLISMYPQLKSSSQLAIIS 650
P F+ + G E A S++N E V+ ++ F K ++PQ + +I+
Sbjct: 713 --SPMMFWS-NLGNEEISASGTSYLNRTEAANVEKIVTRFFK-AGVHPQ-----SIGVIT 763
Query: 651 PYRHQ----VKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGF 706
PY Q V Q TF E K +++ +VD QGREKD I SCVR++D + IGF
Sbjct: 764 PYEGQRSFIVSSMQT--NGTFKKELYKEIEVASVDAFQGREKDFIILSCVRSNDHQGIGF 821
Query: 707 LADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
L+D RR+NV +TRAK ++++G L + W+ L+ ++++CL
Sbjct: 822 LSDPRRLNVALTRAKYGLVILGNPKVLSKHPLWHYLLLHFKERNCL 867
>gi|119183909|ref|XP_001242931.1| hypothetical protein CIMG_06827 [Coccidioides immitis RS]
Length = 1089
Score = 193 bits (490), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 136/405 (33%), Positives = 206/405 (50%), Gaps = 49/405 (12%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLV--EQ 432
+VLVCAPSN A+D++ + TG+ K VR+ K+ V S + HL EQ
Sbjct: 482 QVLVCAPSNVAVDQLCECIHRTGL----------KTVRVTAKSREDVES-PVRHLSLHEQ 530
Query: 433 KRD-DSAADKQKHGATRKDRDSIRSA---------------ILNEAVIVCSTLSFSGSAL 476
R+ DS + K + D + S IL+ A ++C T +G
Sbjct: 531 VRNNDSNVELMKLTQLKNDMGELSSQDEKKFKQLTRAAEKEILSNADVICCTCVGAGDPR 590
Query: 477 LSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGT 536
L+K F V+IDE+ Q+ EP ++PL GCKQV LVGD +QL +++ A G
Sbjct: 591 LAKFK--FRTVLIDESTQSSEPECMIPLVMGCKQVVLVGDHLQLGPVIMNKKAAKAGLNQ 648
Query: 537 SLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRD----WHEY 592
SLF+RL G L QYRMHP + +FPS FY+ +L++G +D +D W
Sbjct: 649 SLFERLVILGCAPIRLNVQYRMHPCLSAFPSNMFYEGSLQNGVTSDDRLLKDVDFPWPVA 708
Query: 593 RCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLK-SSSQLAIISP 651
P F+ + G E A S++N E V K+++ + + S + II+P
Sbjct: 709 D--KPMMFWS-NLGNEEISASGTSYLNRTEAANV----EKIVTRFFKAGVKPSAIGIITP 761
Query: 652 YRHQ----VKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFL 707
Y Q V Q T+ E+ K +++ +VD QGREKD + SCVR++D + IGFL
Sbjct: 762 YEGQRSYVVSSMQ--LNGTYKKEAYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGFL 819
Query: 708 ADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
+D RR+NV +TRAK ++++G L + WN L++ ++ +CL
Sbjct: 820 SDPRRLNVALTRAKYGLVILGNPKVLSKHPLWNYLLRHFKEGNCL 864
>gi|195446723|ref|XP_002070897.1| GK25498 [Drosophila willistoni]
gi|194166982|gb|EDW81883.1| GK25498 [Drosophila willistoni]
Length = 1208
Score = 192 bits (489), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 133/395 (33%), Positives = 218/395 (55%), Gaps = 50/395 (12%)
Query: 376 VLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNS----VAIDHLV- 430
VLVCAPSN+A+D++ ++ T + K+VR+ K+ +++S +A+ + +
Sbjct: 503 VLVCAPSNTAVDQLTEKIHRTNL----------KVVRVCAKSREAIDSPVSFLALHNQIS 552
Query: 431 -----------EQKRDD----SAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSA 475
+Q +D+ S+AD++++ R + S + +L A ++C T +G
Sbjct: 553 NIKANTELKKLQQLKDETGELSSADEKRY---RSLKRSTENQLLEAADVICCTCVGAGDG 609
Query: 476 LLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYG 535
LS++ F ++IDE+ Q+ EP +VP+ G KQ+ LVGD QL V+ A G
Sbjct: 610 RLSRIK--FTSILIDESMQSTEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAARAGLS 667
Query: 536 TSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR-DWHEYRC 594
SLF+RL G L+ QYRMHPE+ FPS FY+ +L++G ED + D+ +
Sbjct: 668 QSLFERLVVLGIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCAEDRRLKLDFPWPQP 727
Query: 595 FGPFSFFDIHEGKESQPAGSG-SWINIDEVDFVLLLFHKLISMYPQLKSS---SQLAIIS 650
P FF + +G+E + AGSG S++N E V K+ + + LK+ Q+ II+
Sbjct: 728 ERPM-FFLVTQGQE-EIAGSGTSFLNRTEAANV----EKITTRF--LKAGVKPEQIGIIT 779
Query: 651 PYRHQVKQFQERFKETFGVESQ--KVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLA 708
PY Q + + + S+ + ++I +VD QGREKD+ I SCVR+++++ IGFL
Sbjct: 780 PYEGQRAYLVQYMQYQGSLHSRLYQEIEIASVDAFQGREKDIIIMSCVRSNERQGIGFLN 839
Query: 709 DYRRMNVGITRAKSSILVVGCASTLREDKHWNNLV 743
D RR+NV +TRAK I++VG L + + WN+L+
Sbjct: 840 DPRRLNVALTRAKYGIIIVGNPKVLSKQQLWNHLL 874
>gi|82915224|ref|XP_729015.1| nonsense mRNA reducing factor 1 [Plasmodium yoelii yoelii 17XNL]
gi|23485801|gb|EAA20580.1| nonsense mRNA reducing factor 1-related [Plasmodium yoelii yoelii]
Length = 1297
Score = 192 bits (489), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 124/380 (32%), Positives = 196/380 (51%), Gaps = 37/380 (9%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVA--------- 425
+VLV APSN A+D++ +R+ TG+ K+VR+ ++ SV+S+A
Sbjct: 712 KVLVTAPSNVAVDQLSVRIHRTGL----------KVVRLCARSRESVSSIADYLYLHNQV 761
Query: 426 ----------IDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSA 475
++ L+E K + ++ +K IL EA ++C+T +
Sbjct: 762 KLLKTDVGEELNKLLELKEEVGELSQKDENRLKKLILHAEYKILTEADVICTTCVGAMDK 821
Query: 476 LLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYG 535
L + F+ V+IDEA Q+ EP LVP+ TG KQ+ LVGD QL ++ A G G
Sbjct: 822 RLKRFR--FNQVLIDEATQSTEPECLVPIVTGAKQIVLVGDHCQLGPIIVCKKAASSGLG 879
Query: 536 TSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVE--DYTTRDWHEYR 593
SLF+RL G L+ QYRMHP + FPS FYD L++G ++ +Y +++
Sbjct: 880 KSLFERLVMLGITPFRLEVQYRMHPCLSEFPSYVFYDGCLQNGITLKEREYPLKNFPWPN 939
Query: 594 CFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYR 653
P F++ G E A S++N +E + +L L++ LK ++Q+ +I+PY
Sbjct: 940 SKYPMFFYN-SNGLEEMSASGTSYLNRNEAQNMEVLVRALLN--AGLK-ATQIGVITPYE 995
Query: 654 HQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRM 713
Q F++ + +++ +VD QGREKD + SCVR++ K IGFL D RR+
Sbjct: 996 GQRAYITSLFQKNISYQHCLDIEVASVDAFQGREKDFILLSCVRSNKKLGIGFLNDPRRL 1055
Query: 714 NVGITRAKSSILVVGCASTL 733
NV +TRAK +++ G A L
Sbjct: 1056 NVALTRAKYGLIICGNAKVL 1075
>gi|242774708|ref|XP_002478495.1| nonsense transcript regulator, putative [Talaromyces stipitatus
ATCC 10500]
gi|218722114|gb|EED21532.1| nonsense transcript regulator, putative [Talaromyces stipitatus
ATCC 10500]
Length = 1093
Score = 192 bits (489), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 135/401 (33%), Positives = 196/401 (48%), Gaps = 41/401 (10%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNS-VAIDHLVEQK 433
+VLVCAPSN A+D++ R+ TG+ K VR+ K+ V S V L EQ
Sbjct: 487 QVLVCAPSNVAVDQLCERIHRTGL----------KTVRVTAKSREDVESPVRFLSLHEQV 536
Query: 434 R-DDSAADKQKHGATRKDRDSIRSA---------------ILNEAVIVCSTLSFSGSALL 477
R +DS + K + + + S IL A ++C T +G L
Sbjct: 537 RMNDSNIELNKLNQLKSELGELSSQDEKKFKQLTRAAEREILTNADVICCTCVGAGDPRL 596
Query: 478 SKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTS 537
+K F V+IDE+ Q+ EP ++PL GCKQV LVGD QL +++ A G S
Sbjct: 597 AKFK--FRTVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQS 654
Query: 538 LFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRD----WHEYR 593
LF+RL G L QYRMHP + FPS FY+ +L++G + RD W
Sbjct: 655 LFERLVILGCSPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGVSMAQRLRRDVDFPWPVAE 714
Query: 594 CFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYR 653
P F+ + G E A S++N E V + + Q S + II+PY
Sbjct: 715 --NPMMFWS-NLGNEEISASGTSYLNRTEAANVEKIVTRFFKAGVQ---PSDIGIITPYE 768
Query: 654 HQVKQFQERFKE--TFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYR 711
Q + TF E K +++ +VD QGREKD + SCVR++D + IGFL+D R
Sbjct: 769 GQRSYVVSSMQATGTFKKEHYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGFLSDPR 828
Query: 712 RMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
R+NV +TRAK ++++G L + WN L+ +++ CL
Sbjct: 829 RLNVALTRAKYGVVILGNPKVLSKHPLWNYLLLHFKERKCL 869
>gi|154305574|ref|XP_001553189.1| hypothetical protein BC1G_08556 [Botryotinia fuckeliana B05.10]
gi|347828532|emb|CCD44229.1| similar to regulator of nonsense transcripts 1 [Botryotinia
fuckeliana]
Length = 1100
Score = 192 bits (489), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 136/404 (33%), Positives = 204/404 (50%), Gaps = 47/404 (11%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSV-NSVAIDHLVEQK 433
+VLVCAPSN A+D++ R+ T + K+VR+ K+ V +SV L EQ
Sbjct: 497 QVLVCAPSNVAVDQLCERIHRTQL----------KVVRLTAKSREDVESSVGFLSLHEQV 546
Query: 434 R-DDSAADKQKHGATRKDRDSIRSA---------------ILNEAVIVCSTLSFSGSALL 477
R +DS + K + + + S IL+ A ++C T +G L
Sbjct: 547 RMNDSNHELAKLTQLKSELGELSSQDEKKFKALTRAAEREILSNADVICCTCVGAGDPRL 606
Query: 478 SKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTS 537
+K+ F V+IDE+ Q+ EP ++PL GCKQV LVGD QL +++ A G S
Sbjct: 607 AKMK--FRTVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQS 664
Query: 538 LFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRD----WHEYR 593
LF+RL G L QYRMHP + FPS FYD +L++G ++ RD W
Sbjct: 665 LFERLVHLGLNPIRLNVQYRMHPCLSEFPSNMFYDGSLQNGVTMQQRLRRDVDFPWPVAD 724
Query: 594 CFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQ---LAIIS 650
P F+ + G E A S++N E V K+++ + K+ Q + +I+
Sbjct: 725 T--PMMFWS-NLGNEEISASGTSYLNRTEASNV----EKIVTRF--FKAGVQPGDIGVIT 775
Query: 651 PYRHQVKQFQERFKE--TFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLA 708
PY Q + +F E K V++ +VD QGREKD I SCVR++D + IGFL+
Sbjct: 776 PYEGQRSYVVTSMQNAGSFKKEHYKEVEVASVDAFQGREKDFIILSCVRSNDHQGIGFLS 835
Query: 709 DYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
D RR+NV +TRAK +++VG L + W+ L++ + + CL
Sbjct: 836 DPRRLNVALTRAKYGLVIVGNPKVLSKHPLWHYLLQHFKDRSCL 879
>gi|85101908|ref|XP_961233.1| ATP-dependent helicase NAM7 [Neurospora crassa OR74A]
gi|18202963|sp|Q9HEH1.1|RENT1_NEUCR RecName: Full=Regulator of nonsense transcripts 1 homolog
gi|11595520|emb|CAC18314.1| probable nonsense-mediated mRNA decay protein [Neurospora crassa]
gi|28922775|gb|EAA31997.1| ATP-dependent helicase NAM7 [Neurospora crassa OR74A]
Length = 1093
Score = 192 bits (489), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 129/402 (32%), Positives = 201/402 (50%), Gaps = 43/402 (10%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVA--------- 425
+VLVCAPSN A+D++ R+ TG+ K+VR+ K+ V S
Sbjct: 501 QVLVCAPSNVAVDQLCERIHRTGL----------KVVRLTAKSREDVESSVSFLALHEQV 550
Query: 426 --------IDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALL 477
+D LV+ K + Q ++ IL A +VC T +G L
Sbjct: 551 RMNTTNKELDGLVKLKTETGELSSQDEKRFKQLTRQAEREILQNADVVCCTCVGAGDPRL 610
Query: 478 SKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTS 537
SK+ F V+IDE+ Q+ EP ++PL GCKQV LVGD QL +++ A G S
Sbjct: 611 SKMK--FRNVLIDESTQSAEPECMIPLVLGCKQVVLVGDHKQLGPVIMNKKAAKAGLNQS 668
Query: 538 LFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRD----WHEYR 593
LF+RL + + LK QYRMHP + FPS FY+ +L++G + +D W
Sbjct: 669 LFERLVKLQFTPIRLKVQYRMHPCLSEFPSNMFYEGSLQNGVTAAERLRKDVDFPWPVPE 728
Query: 594 CFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLK-SSSQLAIISPY 652
P F+ + G E A S++N E V K+++ + + + + +I+PY
Sbjct: 729 T--PMMFWS-NLGNEEISASGTSYLNRTEAANV----EKIVTRFFKAGVKPADIGVITPY 781
Query: 653 RHQVKQFQERFKE--TFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADY 710
Q + TF ES + V++ +VD QGREKD + SCVR+++ + IGFL+D
Sbjct: 782 EGQRSYIVNTMQNTGTFKKESYREVEVASVDAFQGREKDFIVLSCVRSNENQGIGFLSDP 841
Query: 711 RRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
RR+NV +TRAK ++++G L + + W++L+ + + CL
Sbjct: 842 RRLNVALTRAKYGLVIIGNPKVLCKHELWHHLLVHFKDKKCL 883
>gi|212532107|ref|XP_002146210.1| nonsense transcript regulator, putative [Talaromyces marneffei ATCC
18224]
gi|210071574|gb|EEA25663.1| nonsense transcript regulator, putative [Talaromyces marneffei ATCC
18224]
Length = 1093
Score = 192 bits (489), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 135/401 (33%), Positives = 196/401 (48%), Gaps = 41/401 (10%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNS-VAIDHLVEQK 433
+VLVCAPSN A+D++ R+ TG+ K VR+ K+ V S V L EQ
Sbjct: 487 QVLVCAPSNVAVDQLCERIHRTGL----------KTVRVTAKSREDVESPVRFLSLHEQV 536
Query: 434 R-DDSAADKQKHGATRKDRDSIRSA---------------ILNEAVIVCSTLSFSGSALL 477
R +DS + K + + + S IL A ++C T +G L
Sbjct: 537 RMNDSNIELNKLNQLKSELGELSSQDEKKFKQLTRAAEREILTNADVICCTCVGAGDPRL 596
Query: 478 SKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTS 537
+K F V+IDE+ Q+ EP ++PL GCKQV LVGD QL +++ A G S
Sbjct: 597 AKFK--FRTVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQS 654
Query: 538 LFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRD----WHEYR 593
LF+RL G L QYRMHP + FPS FY+ +L++G + RD W
Sbjct: 655 LFERLVILGCSPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGVSMAQRLRRDVDFPWPVAE 714
Query: 594 CFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYR 653
P F+ + G E A S++N E V + + Q S + II+PY
Sbjct: 715 --NPMMFWS-NLGNEEISASGTSYLNRTEAANVEKIVTRFFKAGVQ---PSGIGIITPYE 768
Query: 654 HQVKQFQERFKE--TFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYR 711
Q + TF E K +++ +VD QGREKD + SCVR++D + IGFL+D R
Sbjct: 769 GQRSYVVSSMQATGTFKKEHYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGFLSDPR 828
Query: 712 RMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
R+NV +TRAK ++++G L + WN L+ +++ CL
Sbjct: 829 RLNVALTRAKYGVVILGNPKVLSKHPLWNYLLLHFKERKCL 869
>gi|336263126|ref|XP_003346344.1| hypothetical protein SMAC_07821 [Sordaria macrospora k-hell]
gi|380091672|emb|CCC10804.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1093
Score = 192 bits (489), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 129/402 (32%), Positives = 201/402 (50%), Gaps = 43/402 (10%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVA--------- 425
+VLVCAPSN A+D++ R+ TG+ K+VR+ K+ V S
Sbjct: 501 QVLVCAPSNVAVDQLCERIHRTGL----------KVVRLTAKSREDVESSVSFLALHEQV 550
Query: 426 --------IDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALL 477
+D LV+ K + Q ++ IL A +VC T +G L
Sbjct: 551 RMNTTNKELDGLVKLKTETGELSSQDEKRFKQLTRQAEREILQNADVVCCTCVGAGDPRL 610
Query: 478 SKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTS 537
SK+ F V+IDE+ Q+ EP ++PL GCKQV LVGD QL +++ A G S
Sbjct: 611 SKMK--FRNVLIDESTQSAEPECMIPLVLGCKQVVLVGDHKQLGPVIMNKKAAKAGLNQS 668
Query: 538 LFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRD----WHEYR 593
LF+RL + + LK QYRMHP + FPS FYD +L++G + +D W
Sbjct: 669 LFERLVKLQFTPIRLKVQYRMHPCLSEFPSNMFYDGSLQNGVTAAERLRKDVDFPWPVPE 728
Query: 594 CFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLK-SSSQLAIISPY 652
P F+ + G E A S++N E V K+++ + + + + +I+PY
Sbjct: 729 T--PMMFWS-NLGNEEISASGTSYLNRTEAANV----EKIVTRFFKAGVKPADIGVITPY 781
Query: 653 RHQVKQFQERFKE--TFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADY 710
Q + TF ES + V++ +VD QGREK+ + SCVR+++ + IGFL+D
Sbjct: 782 EGQRSYIVNTMQNTGTFKKESYREVEVASVDAFQGREKEFIVLSCVRSNENQGIGFLSDP 841
Query: 711 RRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
RR+NV +TRAK ++++G L + + W++L+ + + CL
Sbjct: 842 RRLNVALTRAKYGLVIIGNPKVLCKHELWHHLLVHFKDKKCL 883
>gi|348570176|ref|XP_003470873.1| PREDICTED: probable helicase senataxin-like [Cavia porcellus]
Length = 2661
Score = 192 bits (488), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 119/319 (37%), Positives = 172/319 (53%), Gaps = 27/319 (8%)
Query: 455 RSAILNEAVIVCSTLSFSGSALLSKLNHG-----FDVVIIDEAAQAVEPATLVPLATGCK 509
+S I+ E+ I+C TLS SG LL G F VI+DEA Q+ E TL PL C
Sbjct: 2125 QSNIILESHIICCTLSTSGGLLLESAFRGQGGIPFSCVIVDEAGQSCEVETLTPLIHRCN 2184
Query: 510 QVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQR-----------AGYPVKMLKTQYRM 558
++ LVGDP QLP TVIS A+ GY S+ R + + PV L QYRM
Sbjct: 2185 KLILVGDPKQLPPTVISMKAQDYGYDQSMMARFCKLLEENVEQNAISRMPVVQLTVQYRM 2244
Query: 559 HPEVRSFPSREFYDEALEDGSDVEDY-TTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSW 617
HP++ FPS Y+++L+ E + DW F P+ FD+ +G E + + S+
Sbjct: 2245 HPDICLFPSNYIYNKSLKTNRSTESIRCSSDWP----FQPYLVFDVSDGSERR--DNDSY 2298
Query: 618 INIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDI 677
+N E+ V+ + KLI + + + II+ Y+ Q Q+ F + VD
Sbjct: 2299 VNAQEIKLVMEIV-KLIKDKKKEINFRNIGIITHYKAQKTMLQKDLDREFDRKGPAEVD- 2356
Query: 678 TTVDGCQGREKDVAIFSCVRASDKK-SIGFLADYRRMNVGITRAKSSILVVGCASTLRED 736
TVD QGR+KD I +CVRA+ + SIGFLA +R+NV ITRAK S+ ++G TL E+
Sbjct: 2357 -TVDAFQGRQKDCIIVTCVRANTAQGSIGFLASLQRLNVTITRAKYSLFILGHLRTLMEN 2415
Query: 737 KHWNNLVKSAEKQDCLFRV 755
+HWN L++ A+K+ + +
Sbjct: 2416 QHWNELIQDAQKRGAIVKT 2434
Score = 43.5 bits (101), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 109/277 (39%), Gaps = 39/277 (14%)
Query: 52 REVKDTYKDVDDYLATFEPLL----FEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGFH 107
R V ++D +Y F PL+ FE V + + +++ + LR + +
Sbjct: 1715 RPVPVKFQDCGEYFNVFLPLILLNTFETVAQEWMSSPNKDNFYQLHLR-KLPADYKKNWE 1773
Query: 108 LPSVTYEADEVESISP--NDLLLLSKEEF--KEGSTFPTTYAFALVEHC-------QANL 156
E + + P NDL+ L E K+ T P+ HC + ++
Sbjct: 1774 FVVYLKECELAKQCHPKENDLVFLVPERLNGKKSDTEPSCIQELYEYHCGFIHRFRRTSV 1833
Query: 157 LRLRMYLAGEVIHI-NKDAVKSQRLLNIHSLITSSVSAVEKRLFSLKICSLSTIAREYLA 215
+R I +K K L+ ++ SS+ +++L ++ + S R LA
Sbjct: 1834 MRNGKSECSLSIQTEDKLPAKLNELMKC--VVISSLVTTQRKLKAMSLLS----GRNQLA 1887
Query: 216 LRSVGSLPF----KDLILSASEKSSGSQDQSWKIPGLLHEYIKENHNA--SQLEAIHEGL 269
+ P KDL+ + SE+ I L ++ +E A + +
Sbjct: 1888 RVILNPNPMDFCTKDLLTTTSER----------IIAYLKDFNEEQKKAIETAYAMVKHSP 1937
Query: 270 LRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHS 306
LI GPPGTGK++TI+GLL +L R HS
Sbjct: 1938 SVAKICLIHGPPGTGKSKTIVGLLFRLLTENQRRGHS 1974
>gi|296423838|ref|XP_002841459.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637699|emb|CAZ85650.1| unnamed protein product [Tuber melanosporum]
Length = 1105
Score = 192 bits (488), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 142/441 (32%), Positives = 218/441 (49%), Gaps = 53/441 (12%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNS-VAIDHLVEQK 433
+VLVCAPSN A+D++ ++ TG+ K+VR+ K+ V+S V+ L EQ
Sbjct: 482 QVLVCAPSNVAVDQLTEKIHRTGL----------KVVRLTAKSREDVDSPVSFLSLHEQV 531
Query: 434 R-DDSAADKQKHGATRKDRDSIRSA---------------ILNEAVIVCSTLSFSGSALL 477
R +D+ + K G + + + S IL A ++C T +G L
Sbjct: 532 RLNDTNVELVKLGQLKNELGELSSQDEKKFKHLTRNAEREILTNADVICCTCVGAGDPRL 591
Query: 478 SKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTS 537
+KL F V+IDE+ QA EP ++PL GCKQV LVGD QL +++ A G S
Sbjct: 592 AKLK--FRTVLIDESTQAAEPECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAARAGLHQS 649
Query: 538 LFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR--DWHEYRCF 595
LF+RL G L QYRMHP + FPS FY+ +L++G ++ R D+
Sbjct: 650 LFERLVILGCAPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGVTTQERLRRNVDFPWPVAD 709
Query: 596 GPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKS-SSQLAIISPYRH 654
P F+ + G E A S++N E K+I+ + + SQ+ II+PY
Sbjct: 710 TPMMFWS-NLGNEEISASGTSYLNRTEASAC----EKIITRFFKAGVLPSQIGIITPYEG 764
Query: 655 QVKQFQERFKETFGV---ESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYR 711
Q + + +T G E K +++ +VD QGREKD + SCVR++D + IGFL D R
Sbjct: 765 Q-RSYIVSSMQTNGALRKELYKEIEVASVDAFQGREKDYIVLSCVRSNDHQGIGFLNDPR 823
Query: 712 RMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDC------------LFRVSKPY 759
R+NV +TRAK ++++G L + W+ L+ + ++C L + SKP
Sbjct: 824 RLNVALTRAKFGVVILGNPKVLSKHPLWHYLLLHYKDKNCLVEGPLSNLQVSLIQFSKPR 883
Query: 760 ASFFSDENLESMRKNATTDNV 780
S+ S + + + A V
Sbjct: 884 QSYRSPQRYQMAYQAAPNGGV 904
>gi|17510163|ref|NP_490829.1| Protein SMG-2 [Caenorhabditis elegans]
gi|351051256|emb|CCD73461.1| Protein SMG-2 [Caenorhabditis elegans]
Length = 1069
Score = 192 bits (488), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 141/399 (35%), Positives = 200/399 (50%), Gaps = 38/399 (9%)
Query: 376 VLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAH-HSVNSVAIDHLVEQKR 434
VLVC+PSN A+D + ++ TG+ K+VR+ ++ HS +V L Q +
Sbjct: 492 VLVCSPSNIAVDHLAEKIHKTGL----------KVVRLCARSREHSETTVPYLTLQHQLK 541
Query: 435 DDSAADKQK------HGATRKDRDSIR---------SAILNEAVIVCSTLSFSGSALLSK 479
A+ QK + +D +R +L A ++C T S + A LSK
Sbjct: 542 VMGGAELQKLIQLKDEAGELEFKDDLRYMQLKRVKEHELLAAADVICCTCSSAADARLSK 601
Query: 480 LNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLF 539
+ V+IDE+ QA EP LV + G +Q+ LVGD QL VI A G SLF
Sbjct: 602 IR--TRTVLIDESTQATEPEILVSIMRGVRQLVLVGDHCQLGPVVICKKAAIAGLSQSLF 659
Query: 540 KRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVED--YTTRDWHEYRCFGP 597
+RL G L+ QYRMHP + FPS FYD +L++G D T DWH + P
Sbjct: 660 ERLVLLGIRPFRLQVQYRMHPVLSEFPSNVFYDGSLQNGVTENDRHMTGVDWHWPKPNKP 719
Query: 598 FSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVK 657
+FF G E A S++N E V L KLI Q Q+ +I+PY Q +
Sbjct: 720 -AFFWHCSGSEELSASGTSFLNRTEAANVEKLVSKLIKAGVQ---PHQIGVITPYEGQ-R 774
Query: 658 QFQERFKETFGVESQKV---VDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMN 714
F + T G + K+ V+I +VD QGREKD I +CVR++D IGFL+D RR+N
Sbjct: 775 SFIVNYMHTQGTLNSKLYENVEIASVDAFQGREKDYIIVTCVRSNDILGIGFLSDPRRLN 834
Query: 715 VGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLF 753
V ITRAK +++VG A L W+ L+ + ++ L+
Sbjct: 835 VAITRAKYGLVLVGNAKVLARHDLWHELINHYKSKEMLY 873
>gi|407838371|gb|EKG00049.1| regulator of nonsense transcripts 1, putative,nonsense mRNA
reducing factor 1, putative [Trypanosoma cruzi]
Length = 839
Score = 192 bits (488), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 133/401 (33%), Positives = 199/401 (49%), Gaps = 35/401 (8%)
Query: 365 VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIV-----RIGLKAH- 418
V+ +RR R ++LVCAPSN A+D++ R+ G++ + ++ ++V +GL +
Sbjct: 418 VLEVNRRIRSQILVCAPSNVAVDQLAERISAAGLKTVRLHAHYREVVPSSVKHLGLDSQV 477
Query: 419 -----HSVNSVAIDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSG 473
S + + L+E K D+Q+ I A+L A ++C T +
Sbjct: 478 EEFIASSSGNRRLRQLLELKLAGEVLDEQEQKIYNDSVRDIEEALLGGADVICCTCIGAA 537
Query: 474 SALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLG 533
L K+ F V+IDEA Q EP TLVPL G KQVFLVGD QL V S AE G
Sbjct: 538 DRRLGKMR--FQYVLIDEATQGTEPETLVPLVRGAKQVFLVGDHCQLRPLVFSLPAERAG 595
Query: 534 YGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYR 593
SLF+RL G+ L QYRMHP + FPS +FY+ L++G E RD R
Sbjct: 596 LRRSLFERLLMTGHRAVRLDVQYRMHPALSLFPSDQFYEGTLQNGLTEEQ---RD--ASR 650
Query: 594 CFG------PFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLI---SMYPQLKSSS 644
F P F++ G E A S++N E + KLI + P
Sbjct: 651 VFPWPDPTRPIFFYNT-TGSEELSANGSSYLNRAEAALTERIITKLIRDGKVKPD----- 704
Query: 645 QLAIISPYRHQVKQFQERFKETFGV--ESQKVVDITTVDGCQGREKDVAIFSCVRASDKK 702
+ +I+PY Q + + + + V++++VD QGREK+ I SCVR++ ++
Sbjct: 705 DIGVITPYGGQCRYVMNYLVRCGPLPRTAYERVEVSSVDAFQGREKEFIILSCVRSNHRQ 764
Query: 703 SIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLV 743
IGF+ D+RR+NV ITRAK ++++G L W+ L+
Sbjct: 765 GIGFVVDWRRLNVSITRAKRGLIIMGNVQLLSRYPAWHALL 805
>gi|296816783|ref|XP_002848728.1| ATP-dependent helicase NAM7 [Arthroderma otae CBS 113480]
gi|238839181|gb|EEQ28843.1| ATP-dependent helicase NAM7 [Arthroderma otae CBS 113480]
Length = 1088
Score = 192 bits (488), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 144/475 (30%), Positives = 232/475 (48%), Gaps = 50/475 (10%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIG---LKAHHSVNS-------V 424
+VLVCAPSN A+D++ + TG++ + + + + V L H V + V
Sbjct: 479 QVLVCAPSNVAVDQLCECIHRTGLKTVRVTAKSREDVESPVRHLSLHEQVRNNDSNIELV 538
Query: 425 AIDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGF 484
++ L + + S+ D++K+ ++ + IL A ++C T +G L+K F
Sbjct: 539 KLNQLKAELGELSSQDEKKY---KQLTRAAEKEILTNADVICCTCVGAGDPRLAKSK--F 593
Query: 485 DVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQR 544
V+IDE+ Q+ EP ++PL GCKQ LVGD QL +++ A G SLF+RL
Sbjct: 594 RTVLIDESTQSAEPECMIPLVLGCKQAVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVI 653
Query: 545 AGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR--DWHEYRCFGPFSFFD 602
G L QYRMHP + F S FY+ +L++G ED + D+ P F+
Sbjct: 654 LGCAPIRLNVQYRMHPCLSQFSSNMFYEGSLQNGVSSEDRLLKNVDFPWPVADKPMMFWS 713
Query: 603 IHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLK-SSSQLAIISPYRHQ----VK 657
+ G E A S++N E V K+++ + + S + II+PY Q V
Sbjct: 714 -NLGNEEISASGTSYLNRTEAANV----EKIVTRFFKAGVKPSGIGIITPYEGQRSYVVS 768
Query: 658 QFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGI 717
Q TF ES K +++ +VD QGREKD + SCVR++D + IGFL+D RR+NV +
Sbjct: 769 SMQ--LTGTFKKESYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGFLSDPRRLNVAL 826
Query: 718 TRAKSSILVVGCASTLREDKHWNNLVKSAEKQDC------------LFRVSKPYASFFSD 765
TRAK ++++G L + WN L++ ++Q+C L + S+P ++
Sbjct: 827 TRAKYGLVILGNPKVLSKHPLWNYLLRHFKEQNCLVEGPLSNLQTSLIQFSRPKQAYRGP 886
Query: 766 ENLE---SMRKNATTDNVQGADGHVPHDDETMHYANTGDADQGQADDIDNADGDA 817
+ + + N + + G +GH PHD Y + G DD+ + A
Sbjct: 887 QRFQMSFNHASNVDSSMLNGRNGH-PHD-----YHDAGSVVSYIPDDVSSVHSSA 935
>gi|358388726|gb|EHK26319.1| hypothetical protein TRIVIDRAFT_218486 [Trichoderma virens Gv29-8]
Length = 1083
Score = 192 bits (488), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 140/427 (32%), Positives = 210/427 (49%), Gaps = 61/427 (14%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSV-NSVAIDHLVEQK 433
+VLVCAPSN A+D++ R+ TG+ K+VR+ K+ V +SV+ L EQ
Sbjct: 493 QVLVCAPSNVAVDQLCERVHRTGL----------KVVRLTAKSREDVESSVSFLALHEQV 542
Query: 434 R-------------------DDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGS 474
R + S+ D++K R+ + IL+ A ++C T +G
Sbjct: 543 RMSEHNSELVKLSQLKVEVGELSSQDEKK---LRQLTKAAEREILSNADVICCTCVGAGD 599
Query: 475 ALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGY 534
LSK+ F V+IDE+ Q+ EP ++PL GCKQV LVGD QL +++ A G
Sbjct: 600 PRLSKMK--FRNVLIDESTQSAEPECMIPLVLGCKQVVLVGDHKQLGPVIMNKKAAKAGL 657
Query: 535 GTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRD----WH 590
SLF+RL LKTQYRMHP + FPS FYD L++G E +D W
Sbjct: 658 NRSLFERLINLKINPIPLKTQYRMHPCLSEFPSNMFYDGTLQNGITHEQRVRKDVDFPWP 717
Query: 591 EYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLK-SSSQLAII 649
P F+ + G E S++N E V K ++ + + S++ +I
Sbjct: 718 VTEM--PMMFWS-NIGHEEISTSGTSYLNRTEASNV----EKTVTRFFKAGVKPSEIGVI 770
Query: 650 SPYRHQVKQFQERFKE--TFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFL 707
+PY Q + T+ E K V++ +VD QGREKD + SCVR++D + IGFL
Sbjct: 771 TPYEGQRSYIVSTMQNSGTYKKELYKDVEVASVDAFQGREKDFIVLSCVRSNDNQGIGFL 830
Query: 708 ADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKS------------AEKQDCLFRV 755
+D RR+NV +TRAK ++++G L + + W+NL+ Q CL +
Sbjct: 831 SDPRRLNVALTRAKYGLVILGNPKVLSKHELWHNLLAHFKDRKCFVEGPLTNLQACLLQF 890
Query: 756 SKPYASF 762
S+P S+
Sbjct: 891 SRPRVSY 897
>gi|367000487|ref|XP_003684979.1| hypothetical protein TPHA_0C03950 [Tetrapisispora phaffii CBS 4417]
gi|357523276|emb|CCE62545.1| hypothetical protein TPHA_0C03950 [Tetrapisispora phaffii CBS 4417]
Length = 990
Score = 192 bits (488), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 139/430 (32%), Positives = 226/430 (52%), Gaps = 59/430 (13%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + S+ ++ R+LVCAPSN A+D + +L + G+ K+VR
Sbjct: 446 PGTGKTVTSATIVYHLSKSHKDRILVCAPSNVAVDHLATKLRDLGL----------KVVR 495
Query: 413 IGLKAHH----SVNSVAIDHLV---------------EQKRDDSAADKQKHGATRKDRDS 453
+ K+ SV+++A+ +LV E+ + SA+D +K + +S
Sbjct: 496 LTAKSREDVESSVSNLALHNLVARAAKGELRKLLKLKEEVGELSASDTKKFVKLLRKTES 555
Query: 454 IRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFL 513
I+ +A +VC T +G +L+ F V+IDE+ QA EP L+P+ G KQV L
Sbjct: 556 ---EIMKKADVVCCTCVGAGD---KRLDTKFRTVLIDESTQASEPECLIPIIKGAKQVIL 609
Query: 514 VGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDE 573
VGD QL ++ A G SLF+RL G+ L+ QYRM+P + FPS FY+
Sbjct: 610 VGDHQQLGPVILERKAGDAGLKQSLFERLISLGHIPIRLEVQYRMNPYLSEFPSNMFYEG 669
Query: 574 ALEDGSDVEDYTTR----DW--HEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVL 627
+L++G +E T W HE P F+ + G+E A S++N E
Sbjct: 670 SLQNGVTIEQRTVSASSFPWPIHEI----PMMFW-ANFGREEISANGTSYLNRIEAMNCE 724
Query: 628 LLFHKLI--SMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKV---VDITTVDG 682
+ KL + P+ Q+ +I+PY Q + + ++ + G +++ V++ +VD
Sbjct: 725 RIITKLFKDGVKPE-----QIGVITPYEGQ-RAYILQYMQMNGSLDKELYINVEVASVDA 778
Query: 683 CQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNL 742
QGREKD I SCVRA+++++IGFL+D RR+NVG+TRAK ++++G +L + WN+L
Sbjct: 779 FQGREKDYIILSCVRANEQQAIGFLSDPRRLNVGLTRAKYGLVILGNPRSLSRNSLWNHL 838
Query: 743 VKSAEKQDCL 752
+ ++ CL
Sbjct: 839 LIHFREKGCL 848
>gi|397503688|ref|XP_003822451.1| PREDICTED: probable helicase senataxin [Pan paniscus]
Length = 2669
Score = 192 bits (487), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 119/319 (37%), Positives = 170/319 (53%), Gaps = 27/319 (8%)
Query: 455 RSAILNEAVIVCSTLSFSGSALLSKLNHG-----FDVVIIDEAAQAVEPATLVPLATGCK 509
+S I+ E+ I+C TLS SG LL G F VI+DEA Q+ E TL PL C
Sbjct: 2133 QSIIILESHIICCTLSTSGGLLLESAFRGQGGVPFSCVIVDEAGQSCEIETLTPLIHRCN 2192
Query: 510 QVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQR-----------AGYPVKMLKTQYRM 558
++ LVGDP QLP TVIS A+ GY S+ R R + P+ L QYRM
Sbjct: 2193 KLILVGDPKQLPPTVISMKAQEYGYDQSMMARFCRLLEENVEHNMISRLPILQLTVQYRM 2252
Query: 559 HPEVRSFPSREFYDEALEDGSDVEDY-TTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSW 617
HP++ FPS Y+ L+ E + DW F P+ FD+ +G E + + S+
Sbjct: 2253 HPDICLFPSNYVYNRNLKTNRQTEAIRCSSDWP----FQPYLVFDVGDGSERR--DNDSY 2306
Query: 618 INIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDI 677
IN+ E+ V+ + + + S + II+ Y+ Q Q+ + F + VD
Sbjct: 2307 INVQEIKLVMEIIKLIKDKKKDV-SFRNIGIITHYKAQKTMIQKDLDKEFDRKGPAEVD- 2364
Query: 678 TTVDGCQGREKDVAIFSCVRA-SDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLRED 736
TVD QGR+KD I +CVRA S + SIGFLA +R+NV ITRAK S+ ++G TL E+
Sbjct: 2365 -TVDAFQGRQKDCVIVTCVRANSMQGSIGFLASLQRLNVTITRAKYSLFILGHLRTLMEN 2423
Query: 737 KHWNNLVKSAEKQDCLFRV 755
+HWN L++ A+K+ + +
Sbjct: 2424 QHWNQLIQDAQKRGAIIKT 2442
Score = 40.8 bits (94), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 60/127 (47%), Gaps = 14/127 (11%)
Query: 183 IHSLITSSVSAVEKRLFSLKIC-SLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQ 241
++ ++ SS+ +++L ++ + S + +AR L V KDL+ + SE+
Sbjct: 1867 VNCIVISSLVTTQRKLKAMSLLGSRNQLARAVLNPNPV-DFCTKDLLTTTSER------- 1918
Query: 242 SWKIPGLLHEYIKENHNA--SQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHA 299
I L ++ ++ A + + LI GPPGTGK++TI+GLL +L
Sbjct: 1919 ---IIAYLRDFNEDQKKAIETAYAMVKHSPSVAKICLIHGPPGTGKSKTIVGLLYRLLTE 1975
Query: 300 TPARVHS 306
+ HS
Sbjct: 1976 NQRKGHS 1982
>gi|114627310|ref|XP_520331.2| PREDICTED: probable helicase senataxin isoform 8 [Pan troglodytes]
gi|410339883|gb|JAA38888.1| senataxin [Pan troglodytes]
Length = 2668
Score = 192 bits (487), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 119/319 (37%), Positives = 170/319 (53%), Gaps = 27/319 (8%)
Query: 455 RSAILNEAVIVCSTLSFSGSALLSKLNHG-----FDVVIIDEAAQAVEPATLVPLATGCK 509
+S I+ E+ I+C TLS SG LL G F VI+DEA Q+ E TL PL C
Sbjct: 2132 QSIIILESHIICCTLSTSGGLLLESAFRGQGGVPFSCVIVDEAGQSCEIETLTPLIHRCN 2191
Query: 510 QVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQR-----------AGYPVKMLKTQYRM 558
++ LVGDP QLP TVIS A+ GY S+ R R + P+ L QYRM
Sbjct: 2192 KLILVGDPKQLPPTVISMKAQEYGYDQSMMARFCRLLEENVEHNMISRLPILQLTVQYRM 2251
Query: 559 HPEVRSFPSREFYDEALEDGSDVEDY-TTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSW 617
HP++ FPS Y+ L+ E + DW F P+ FD+ +G E + + S+
Sbjct: 2252 HPDICLFPSNYVYNRNLKTNRQTEAIRCSSDWP----FQPYLVFDVGDGSERR--DNDSY 2305
Query: 618 INIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDI 677
IN+ E+ V+ + + + S + II+ Y+ Q Q+ + F + VD
Sbjct: 2306 INVQEIKLVMEIIKLIKDKKKDV-SFRNIGIITHYKAQKTMIQKDLDKEFDRKGPAEVD- 2363
Query: 678 TTVDGCQGREKDVAIFSCVRA-SDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLRED 736
TVD QGR+KD I +CVRA S + SIGFLA +R+NV ITRAK S+ ++G TL E+
Sbjct: 2364 -TVDAFQGRQKDCVIVTCVRANSMQGSIGFLASLQRLNVTITRAKYSLFILGHLRTLMEN 2422
Query: 737 KHWNNLVKSAEKQDCLFRV 755
+HWN L++ A+K+ + +
Sbjct: 2423 QHWNQLIQDAQKRGAIIKT 2441
Score = 40.8 bits (94), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 60/127 (47%), Gaps = 14/127 (11%)
Query: 183 IHSLITSSVSAVEKRLFSLKIC-SLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQ 241
++ ++ SS+ +++L ++ + S + +AR L V KDL+ + SE+
Sbjct: 1866 VNCIVISSLVTTQRKLKAMSLLGSRNQLARAVLNPNPV-DFCTKDLLTTTSER------- 1917
Query: 242 SWKIPGLLHEYIKENHNA--SQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHA 299
I L ++ ++ A + + LI GPPGTGK++TI+GLL +L
Sbjct: 1918 ---IIAYLRDFNEDQKKAIETAYAMVKHSPSVAKICLIHGPPGTGKSKTIVGLLYRLLTE 1974
Query: 300 TPARVHS 306
+ HS
Sbjct: 1975 NQRKGHS 1981
>gi|396082359|gb|AFN83969.1| putative DNA helicase [Encephalitozoon romaleae SJ-2008]
Length = 779
Score = 192 bits (487), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 128/402 (31%), Positives = 206/402 (51%), Gaps = 26/402 (6%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG L V N + Y +VLV APSN+A+D++ L++ TG++ + S + +
Sbjct: 362 PGTGKTLVSSSIVYNFVKHYGGKVLVVAPSNTAVDQLTLKIHKTGLKVLRVMSRRRECGQ 421
Query: 413 IG---LKAHHSVNSVAIDHLVEQKRDDSAADKQKHGATRKDR--DSIRSAILNEAVIVCS 467
L H ++ + +K+D+ D ++ + D +S++ +LN+A ++
Sbjct: 422 SDVSFLSLHENLRELQEGR---KKKDEGCRDNGRYNSIYNDEVSESLKKQLLNQAEVITC 478
Query: 468 TLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISP 527
T SG + +K F V+IDEA Q+ EP +L+PL GCK++ LVGD QL T++
Sbjct: 479 TCVTSGQKMFNKFR--FHYVLIDEAVQSTEPLSLIPLVYGCKKLVLVGDHKQLGPTILCK 536
Query: 528 VAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR 587
G+ SLF+RL G +L QYRM ++ +PS FY+ L G +
Sbjct: 537 KVAQAGFKQSLFERLISIGVVPYVLSIQYRMDTDLCEWPSEMFYNGELLTGG-------K 589
Query: 588 DWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLA 647
+ + P +FF + G+E A S+IN E + + L + +Q+
Sbjct: 590 RFCRFDLGIPTNFFYVCYGREEVSASGTSFINQAEALYCESIIRHLFKCGV---TENQIG 646
Query: 648 IISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFL 707
+I+PY Q R FG E ++I+ VDG QGREKD I S VR++ + IGF+
Sbjct: 647 VITPYEGQRSYILNRI---FGAEPGN-LEISNVDGFQGREKDFIIVSLVRSNLYQGIGFV 702
Query: 708 ADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQ 749
D RRMNV +TRAK ++++G +TL + W+NL+ +K+
Sbjct: 703 GDKRRMNVTLTRAKHGLVIIGNPTTLMKHDMWSNLLSFYDKK 744
>gi|198468730|ref|XP_002134102.1| GA29178 [Drosophila pseudoobscura pseudoobscura]
gi|198146545|gb|EDY72729.1| GA29178 [Drosophila pseudoobscura pseudoobscura]
Length = 1209
Score = 192 bits (487), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 132/395 (33%), Positives = 217/395 (54%), Gaps = 50/395 (12%)
Query: 376 VLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNS----VAIDHLV- 430
VLVCAPSN+A+D++ ++ T + K+VR+ K+ +++S +A+ + +
Sbjct: 498 VLVCAPSNTAVDQLTEKIHRTNL----------KVVRVCAKSREAIDSPVSFLALHNQIR 547
Query: 431 -----------EQKRDD----SAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSA 475
+Q +D+ S+AD++++ R + + +L A ++C T +G
Sbjct: 548 SMETNTELKKLQQLKDETGELSSADEKRY---RNLKRGTENQLLEAADVICCTCVGAGDG 604
Query: 476 LLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYG 535
LS++ F ++IDE+ Q+ EP +VP+ G KQ+ LVGD QL V+ A G
Sbjct: 605 RLSRIK--FTSILIDESMQSTEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAARAGLS 662
Query: 536 TSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR-DWHEYRC 594
SLF+RL G L+ QYRMHPE+ FPS FY+ +L++G ED + D+ +
Sbjct: 663 QSLFERLVVLGIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCAEDRRLKLDFPWPQP 722
Query: 595 FGPFSFFDIHEGKESQPAGSG-SWINIDEVDFVLLLFHKLISMYPQLKSS---SQLAIIS 650
P FF + +G+E + AGSG S++N E V K+ + + LK+ Q+ II+
Sbjct: 723 ERPM-FFLVTQGQE-EIAGSGTSFLNRTEAANV----EKITTRF--LKAGVKPEQIGIIT 774
Query: 651 PYRHQVKQFQERFKETFGVESQ--KVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLA 708
PY Q + + + S+ + ++I +VD QGREKD+ I SCVR+++++ IGFL
Sbjct: 775 PYEGQRAYLVQYMQYQGSLHSRLYQEIEIASVDAFQGREKDIIIMSCVRSNERQGIGFLN 834
Query: 709 DYRRMNVGITRAKSSILVVGCASTLREDKHWNNLV 743
D RR+NV +TRAK I++VG L + + WN+L+
Sbjct: 835 DPRRLNVALTRAKYGIIIVGNPKVLAKQQLWNHLL 869
>gi|195480688|ref|XP_002101353.1| GE17585 [Drosophila yakuba]
gi|194188877|gb|EDX02461.1| GE17585 [Drosophila yakuba]
Length = 1187
Score = 191 bits (486), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 130/394 (32%), Positives = 217/394 (55%), Gaps = 48/394 (12%)
Query: 376 VLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNS----VAIDHLV- 430
VLVCAPSN+A+D++ ++ T + K+VR+ K+ +++S +A+ + +
Sbjct: 498 VLVCAPSNTAVDQLTEKIHRTNL----------KVVRVCAKSREAIDSPVSFLALHNQIR 547
Query: 431 -----------EQKRDD----SAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSA 475
+Q +D+ S+AD++++ R + + + +L A ++C T +G
Sbjct: 548 NMETNSELKKLQQLKDETGELSSADEKRY---RSLKRAAENQLLEAADVICCTCVGAGDG 604
Query: 476 LLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYG 535
LS++ F ++IDE+ Q+ EP +VP+ G KQ+ LVGD QL V+ A G
Sbjct: 605 RLSRIK--FTSILIDESMQSTEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAARAGLS 662
Query: 536 TSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR-DWHEYRC 594
SLF+RL G L+ QYRMHPE+ FPS FY+ +L++G ED + D+ +
Sbjct: 663 QSLFERLVVLGIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCAEDRRLKLDFPWPQP 722
Query: 595 FGPFSFFDIHEGKESQPAGSG-SWINIDEVDFVLLLFHKLI--SMYPQLKSSSQLAIISP 651
P FF + +G+E + AGSG S++N E V + + + + P+ Q+ II+P
Sbjct: 723 ERPM-FFLVTQGQE-EIAGSGTSFLNRTEAANVEKITTRFLKAGIKPE-----QIGIITP 775
Query: 652 YRHQVKQFQERFKETFGVESQ--KVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLAD 709
Y Q + + + S+ + ++I +VD QGREKD+ I SCVR+++++ IGFL D
Sbjct: 776 YEGQRAYLVQYMQYQGSLHSRLYQEIEIASVDAFQGREKDIIIMSCVRSNERQGIGFLND 835
Query: 710 YRRMNVGITRAKSSILVVGCASTLREDKHWNNLV 743
RR+NV +TRAK I++VG L + + WN+L+
Sbjct: 836 PRRLNVALTRAKYGIIIVGNPKVLAKQQLWNHLL 869
>gi|195165354|ref|XP_002023504.1| GL20400 [Drosophila persimilis]
gi|194105609|gb|EDW27652.1| GL20400 [Drosophila persimilis]
Length = 879
Score = 191 bits (486), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 132/395 (33%), Positives = 217/395 (54%), Gaps = 50/395 (12%)
Query: 376 VLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNS----VAIDHLV- 430
VLVCAPSN+A+D++ ++ T + K+VR+ K+ +++S +A+ + +
Sbjct: 168 VLVCAPSNTAVDQLTEKIHRTNL----------KVVRVCAKSREAIDSPVSFLALHNQIR 217
Query: 431 -----------EQKRDD----SAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSA 475
+Q +D+ S+AD++++ R + + +L A ++C T +G
Sbjct: 218 SMETNTELKKLQQLKDETGELSSADEKRY---RNLKRGTENQLLEAADVICCTCVGAGDG 274
Query: 476 LLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYG 535
LS++ F ++IDE+ Q+ EP +VP+ G KQ+ LVGD QL V+ A G
Sbjct: 275 RLSRIK--FTSILIDESMQSTEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAARAGLS 332
Query: 536 TSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR-DWHEYRC 594
SLF+RL G L+ QYRMHPE+ FPS FY+ +L++G ED + D+ +
Sbjct: 333 QSLFERLVVLGIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCAEDRRLKLDFPWPQP 392
Query: 595 FGPFSFFDIHEGKESQPAGSG-SWINIDEVDFVLLLFHKLISMYPQLKSS---SQLAIIS 650
P FF + +G+E + AGSG S++N E V K+ + + LK+ Q+ II+
Sbjct: 393 ERPM-FFLVTQGQE-EIAGSGTSFLNRTEAANV----EKITTRF--LKAGVKPEQIGIIT 444
Query: 651 PYRHQVKQFQERFKETFGVESQ--KVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLA 708
PY Q + + + S+ + ++I +VD QGREKD+ I SCVR+++++ IGFL
Sbjct: 445 PYEGQRAYLVQYMQYQGSLHSRLYQEIEIASVDAFQGREKDIIIMSCVRSNERQGIGFLN 504
Query: 709 DYRRMNVGITRAKSSILVVGCASTLREDKHWNNLV 743
D RR+NV +TRAK I++VG L + + WN+L+
Sbjct: 505 DPRRLNVALTRAKYGIIIVGNPKVLAKQQLWNHLL 539
>gi|366987891|ref|XP_003673712.1| hypothetical protein NCAS_0A07730 [Naumovozyma castellii CBS 4309]
gi|342299575|emb|CCC67331.1| hypothetical protein NCAS_0A07730 [Naumovozyma castellii CBS 4309]
Length = 992
Score = 191 bits (486), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 140/428 (32%), Positives = 223/428 (52%), Gaps = 55/428 (12%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + S+ ++ RVLVCAPSN A+D + +L + G+ K+VR
Sbjct: 442 PGTGKTVTSATIVYHLSKIHKERVLVCAPSNVAVDHLAAKLRDLGL----------KVVR 491
Query: 413 IGLKAHH----SVNSVAIDHLV---------------EQKRDDSAADKQKHGATRKDRDS 453
+ K+ SV+++A+ +LV E+ + SA+D +K + ++
Sbjct: 492 LTAKSREDVESSVSNLALHNLVARSSKGELRKLLTLKEEVGELSASDTKKFVKLVRRTEA 551
Query: 454 IRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFL 513
IL +A +VC T +G +L+ F V+IDE+ QA EP L+P+ G KQV L
Sbjct: 552 ---EILAKADVVCCTCVGAGD---KRLDTKFRTVLIDESTQATEPECLIPIIKGAKQVIL 605
Query: 514 VGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDE 573
VGD QL ++ A G SLF+RL G+ L+ QYRM+P + FPS FY+
Sbjct: 606 VGDHQQLGPVILERKAGDAGLKQSLFERLISLGHIPIRLEVQYRMNPYLSEFPSNMFYEG 665
Query: 574 ALEDGSDVEDYT----TRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLL 629
+L++G +E T T W + P F+ + G+E + S++N E +
Sbjct: 666 SLQNGVTIEQRTVPNSTFPWPIHDV--PMMFW-ANYGREELSSNGTSYLNRIEAMNCERI 722
Query: 630 FHKLI--SMYPQLKSSSQLAIISPYRHQ---VKQFQERFKETFGVESQKVVDITTVDGCQ 684
KL + P+ Q+ +I+PY Q + Q+ + + E V++ +VD Q
Sbjct: 723 ITKLFRDGVKPE-----QIGVITPYEGQRAYILQYMQ-MNGSLDKEMYVKVEVASVDAFQ 776
Query: 685 GREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVK 744
GREKD I SCVRA+D+++IGFL D RR+NVG+TRAK ++++G +L ++ WN+L+
Sbjct: 777 GREKDYIILSCVRANDQQAIGFLRDPRRLNVGLTRAKYGLVILGNPRSLSKNILWNHLLL 836
Query: 745 SAEKQDCL 752
++ CL
Sbjct: 837 HFREKGCL 844
>gi|407927468|gb|EKG20360.1| ATPase AAA+ type core [Macrophomina phaseolina MS6]
Length = 1086
Score = 191 bits (486), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 129/392 (32%), Positives = 205/392 (52%), Gaps = 23/392 (5%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR--IG-LKAHHSV----NSVAID 427
+VLVCAPSN A+D++ R+ TG++ + + + + V +G L H V +V ++
Sbjct: 483 QVLVCAPSNVAVDQLCERIHRTGLKTVRVTAKSREDVESPVGFLSLHEQVRMNDTNVELN 542
Query: 428 HLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVV 487
L + K + Q ++ + IL A ++C T +G L+K F V
Sbjct: 543 KLNQLKSELGELSSQDEKKFKQLTRAAEREILTNADVICCTCVGAGDPRLAKFK--FRTV 600
Query: 488 IIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGY 547
+IDE+ Q+ EP ++PL GCKQV LVGD QL +++ A G SLF+RL G
Sbjct: 601 LIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVILGC 660
Query: 548 PVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFG--PFSFFDIHE 605
L+ QYRMHP + FPS FY+ +L++G E ++ G P F+ +
Sbjct: 661 APIRLQVQYRMHPCLSEFPSNMFYEGSLQNGVTRESRMRKEVDFPWPVGDSPMMFWS-NL 719
Query: 606 GKESQPAGSGSWINIDE---VDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQER 662
G E A S++N E V+ ++ F K + PQ + II+PY Q +
Sbjct: 720 GNEEISASGTSYLNRTEAANVEKIVTRFFK-AGVKPQ-----DIGIITPYEGQRSYVVQS 773
Query: 663 FKE--TFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRA 720
+ TF E+ K +++ +VD QGREKD + SCVR++D + IGFL+D RR+NV +TRA
Sbjct: 774 MQANGTFKKENYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGFLSDPRRLNVALTRA 833
Query: 721 KSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
K ++++G L + W+ L+ ++++CL
Sbjct: 834 KYGLVILGNPKVLSKHPLWHYLLLHFKERNCL 865
>gi|363749513|ref|XP_003644974.1| hypothetical protein Ecym_2426 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888607|gb|AET38157.1| Hypothetical protein Ecym_2426 [Eremothecium cymbalariae
DBVPG#7215]
Length = 1002
Score = 191 bits (486), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 137/428 (32%), Positives = 221/428 (51%), Gaps = 55/428 (12%)
Query: 355 PTTGNELKPEVV--NSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + + + S+ ++ R+LVCAPSN+A+D + +L + G+ K+VR
Sbjct: 442 PGTGKTVTSATIIYHLSKMHKERLLVCAPSNTAVDHLAAKLRDLGL----------KVVR 491
Query: 413 IGLKAHH----SVNSVAIDHLVEQK---------RDDSAADKQKHGATRKDRDSIR---S 456
+ K+ SV+ +A+ +L+++ R A + TR +R S
Sbjct: 492 LTAKSREDVESSVSDLALHNLIKRSAQGELKKLLRLKEDAGELSARETRLFAKLVRKNES 551
Query: 457 AILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGD 516
AIL +A +VC T +G +L+ F V+IDE+ QA EP L+P+ G KQV LVGD
Sbjct: 552 AILKKADVVCCTCVGAGD---KRLDSKFRTVLIDESTQASEPECLIPVVKGTKQVILVGD 608
Query: 517 PVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALE 576
QL ++ A + G SLF++L G+ L+ QYRM+P + FPS FY+ L+
Sbjct: 609 HQQLGPVILDRKAGNAGLKQSLFEKLVSLGHVPIRLEVQYRMNPYLSEFPSNMFYEGTLQ 668
Query: 577 DGSDVEDYTTRD----WHEYRCFGPFS----FFDIHEGKESQPAGSGSWINIDEVDFVLL 628
+G VE T + W P S F + G+E A S++N E +
Sbjct: 669 NGVTVEQRTILESSFPW-------PISDIPMMFWANYGREEISANGTSYLNRIEA----I 717
Query: 629 LFHKLIS-MYPQLKSSSQLAIISPYRHQ---VKQFQERFKETFGVESQKVVDITTVDGCQ 684
++I+ ++ +Q+ +I+PY Q + Q+ + + + V++ +VD Q
Sbjct: 718 NCERIITRLFKDGVKPAQIGVITPYEGQRAYIVQYMQ-MNGSMDKDMYMTVEVGSVDAFQ 776
Query: 685 GREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVK 744
GREKD I SCVRA+D +SIGFL D RR+NV +TRAK + ++G ++L ++ WN+L+
Sbjct: 777 GREKDYIILSCVRANDHQSIGFLVDPRRLNVALTRAKYGLAILGNPTSLFRNRLWNHLLI 836
Query: 745 SAEKQDCL 752
++ CL
Sbjct: 837 HFREKGCL 844
>gi|365989598|ref|XP_003671629.1| hypothetical protein NDAI_0H02120 [Naumovozyma dairenensis CBS 421]
gi|343770402|emb|CCD26386.1| hypothetical protein NDAI_0H02120 [Naumovozyma dairenensis CBS 421]
Length = 993
Score = 191 bits (486), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 138/426 (32%), Positives = 222/426 (52%), Gaps = 51/426 (11%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + ++ ++ +VLVCAPSN A+D + +L + G+ K+VR
Sbjct: 442 PGTGKTVTSATIVYHLTKIHKDKVLVCAPSNVAVDHLAAKLRDLGL----------KVVR 491
Query: 413 IGLKAHH----SVNSVAIDHLV---------------EQKRDDSAADKQKH-GATRKDRD 452
+ K+ SV+++A+ +LV E+ + SA+D ++ RK
Sbjct: 492 LTAKSREDVESSVSNLALHNLVARGSKGELRKLLRLKEEVGELSASDTKRFVKLVRK--- 548
Query: 453 SIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVF 512
S IL +A +VC T +G +L+ F V+IDE+ QA EP L+P+ G KQV
Sbjct: 549 -TESEILAKADVVCCTCVGAGD---KRLDTKFRTVLIDESTQATEPECLIPIVKGAKQVI 604
Query: 513 LVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYD 572
LVGD QL ++ A G SLF+RL G+ L+ QYRM+P + FPS FY+
Sbjct: 605 LVGDHKQLGPVILERKAGDAGLKQSLFERLISLGHIPFRLEIQYRMNPYLSEFPSNMFYE 664
Query: 573 EALEDGSDVEDYTTRD-WHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFH 631
+L++G +E T D + G F + G+E + S++N E +
Sbjct: 665 GSLQNGVTIEQRTVSDSTFPWPIHGVPMMFWANYGREELSSNGTSYLNRIEAMNCERIIT 724
Query: 632 KLI--SMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKV---VDITTVDGCQGR 686
KL + P+ Q+ +I+PY Q + + ++ + G + + V++ +VD QGR
Sbjct: 725 KLFKDGVKPE-----QIGVITPYEGQ-RAYILQYMQMNGAMDKDLYVKVEVASVDAFQGR 778
Query: 687 EKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSA 746
EKD I SCVRA+D+++IGFL D RR+NVG+TRAK ++++G +L + WN+L+
Sbjct: 779 EKDYIILSCVRANDQQAIGFLRDPRRLNVGLTRAKYGLVILGNPMSLSRNLLWNHLLIHF 838
Query: 747 EKQDCL 752
++ CL
Sbjct: 839 REKGCL 844
>gi|194770581|ref|XP_001967370.1| GF21587 [Drosophila ananassae]
gi|190618050|gb|EDV33574.1| GF21587 [Drosophila ananassae]
Length = 1180
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 132/395 (33%), Positives = 217/395 (54%), Gaps = 50/395 (12%)
Query: 376 VLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNS----VAIDHLV- 430
VLVCAPSN+A+D++ ++ T + K+VR+ K+ +++S +A+ + +
Sbjct: 498 VLVCAPSNTAVDQLTEKIHRTNL----------KVVRVCAKSREAIDSPVSFLALHNQIR 547
Query: 431 -----------EQKRDD----SAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSA 475
+Q +D+ S+AD++++ R + + +L A ++C T +G
Sbjct: 548 NMETNSELKKLQQLKDETGELSSADEKRY---RSLKRGTENQLLEAADVICCTCVGAGDG 604
Query: 476 LLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYG 535
LS++ F ++IDE+ Q+ EP +VP+ G KQ+ LVGD QL V+ A G
Sbjct: 605 RLSRIK--FTSILIDESMQSTEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAARAGLS 662
Query: 536 TSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR-DWHEYRC 594
SLF+RL G L+ QYRMHPE+ FPS FY+ +L++G ED + D+ +
Sbjct: 663 QSLFERLVVLGIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCAEDRRLKLDFPWPQP 722
Query: 595 FGPFSFFDIHEGKESQPAGSG-SWINIDEVDFVLLLFHKLISMYPQLKSS---SQLAIIS 650
P FF + +G+E + AGSG S++N E V K+ + + LK+ Q+ II+
Sbjct: 723 ERPM-FFLVTQGQE-EIAGSGTSFLNRTEAANV----EKITTRF--LKAGIKPEQIGIIT 774
Query: 651 PYRHQVKQFQERFKETFGVESQ--KVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLA 708
PY Q + + + S+ + ++I +VD QGREKD+ I SCVR+++++ IGFL
Sbjct: 775 PYEGQRAYLVQYMQYQGSLHSRLYQEIEIASVDAFQGREKDIIIMSCVRSNERQGIGFLN 834
Query: 709 DYRRMNVGITRAKSSILVVGCASTLREDKHWNNLV 743
D RR+NV +TRAK I++VG L + + WN+L+
Sbjct: 835 DPRRLNVALTRAKYGIIIVGNPKVLAKQQLWNHLL 869
>gi|405953739|gb|EKC21342.1| Regulator of nonsense transcripts 1 [Crassostrea gigas]
Length = 1108
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 132/403 (32%), Positives = 212/403 (52%), Gaps = 45/403 (11%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNS-VAIDHLVEQK 433
+VLVCAPSN A+D++ ++ TG+ K+VR+ K+ +++S V+ L Q
Sbjct: 499 QVLVCAPSNIAVDQLTEKIHKTGL----------KVVRLCAKSREAIDSPVSFLALHNQI 548
Query: 434 RD-DSAADKQKHGATRKDRDSIRSA---------------ILNEAVIVCSTLSFSGSALL 477
R+ +S + QK + + + S +L A ++C T +G L
Sbjct: 549 RNMESVPELQKLQQLKDETGELSSTDEKRYRSLKKQCEKELLQHADVICCTCVGTGDPRL 608
Query: 478 SKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTS 537
+K+ F V+IDE+ QA EP ++P+ GC+Q+ LVGD QL V+ A G S
Sbjct: 609 AKMQ--FRSVLIDESTQATEPECMIPVVLGCRQLILVGDHCQLGPVVMCKKAARAGLSQS 666
Query: 538 LFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR--DWHEYRCF 595
LF+RL G L+ QYRMHP + +FPS FY+ +L++G D + D +
Sbjct: 667 LFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVAPGDRVRKGLDIPWPQGD 726
Query: 596 GPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSS---SQLAIISPY 652
P FF G+E + S++N E V K+ + + L+S+ Q+ II+PY
Sbjct: 727 KPM-FFYTTSGQEEISSSGTSYLNRTEAANV----EKIATRF--LRSNVKPEQIGIITPY 779
Query: 653 RHQVKQFQERFKETFGVESQKV---VDITTVDGCQGREKDVAIFSCVRASDKKSIGFLAD 709
Q + + ++ + G ++K+ +++ +VD QGREKD I SCVR+++ + IGFL D
Sbjct: 780 EGQ-RAYIVQYMQYSGSLNKKLYQEIEVASVDAFQGREKDFIILSCVRSNEHQGIGFLND 838
Query: 710 YRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
RR+NV +TRAK I++VG L + WN+L+ ++Q CL
Sbjct: 839 PRRLNVALTRAKYGIIIVGNPKVLSKQPLWNHLLTYYKEQKCL 881
>gi|195043318|ref|XP_001991595.1| GH11976 [Drosophila grimshawi]
gi|193901353|gb|EDW00220.1| GH11976 [Drosophila grimshawi]
Length = 1276
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 130/394 (32%), Positives = 217/394 (55%), Gaps = 48/394 (12%)
Query: 376 VLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNS----VAIDHLV- 430
VLVCAPSN+A+D++ ++ T + K+VR+ K+ +++S +A+ + +
Sbjct: 524 VLVCAPSNTAVDQLTEKIHRTNL----------KVVRVCAKSREAIDSPVSFLALHNQIR 573
Query: 431 -----------EQKRDD----SAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSA 475
+Q +D+ S+AD++++ R + + + +L A ++C T +G
Sbjct: 574 NMETNSELKKLQQLKDETGELSSADEKRY---RSLKRATENQLLEAADVICCTCVGAGDV 630
Query: 476 LLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYG 535
LS++ F ++IDE+ Q+ EP +VP+ G KQ+ LVGD QL V+ A G
Sbjct: 631 RLSRIK--FTSILIDESMQSTEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAARAGLS 688
Query: 536 TSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR-DWHEYRC 594
SLF+RL G L+ QYRMHPE+ FPS FY+ +L++G ED + D+ +
Sbjct: 689 QSLFERLVVLGIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCAEDRRLKLDFPWPQP 748
Query: 595 FGPFSFFDIHEGKESQPAGSG-SWINIDEVDFVLLLFHKLI--SMYPQLKSSSQLAIISP 651
P FF + +G+E + AGSG S++N E V + + + + P+ Q+ II+P
Sbjct: 749 DRPM-FFLVTQGQE-EIAGSGTSFLNRTEAANVEKITTRFLKAGIKPE-----QIGIITP 801
Query: 652 YRHQVKQFQERFKETFGVESQ--KVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLAD 709
Y Q + + + S+ + ++I +VD QGREKD+ I SCVR+++++ IGFL D
Sbjct: 802 YEGQRAYLVQYMQYQGSLHSRLYQEIEIASVDAFQGREKDIIIMSCVRSNERQGIGFLND 861
Query: 710 YRRMNVGITRAKSSILVVGCASTLREDKHWNNLV 743
RR+NV +TRAK I++VG L + + WN+L+
Sbjct: 862 PRRLNVALTRAKYGIIIVGNPKVLSKQQLWNHLL 895
>gi|238882462|gb|EEQ46100.1| ATP-dependent helicase NAM7 [Candida albicans WO-1]
Length = 1019
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 142/419 (33%), Positives = 213/419 (50%), Gaps = 34/419 (8%)
Query: 355 PTTGNELKPEVV--NSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + + + S+ + ++LVCAPSN A+D + +L G+ + + + + V
Sbjct: 464 PGTGKTVTSATIIYHLSKLNKQKILVCAPSNVAVDHLAAKLDLLGLNVVRLTAKSREDVE 523
Query: 413 IG---LKAHHSVNSVA------IDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAV 463
L H+ VNS A + L Q + S AD + K S +LN+A
Sbjct: 524 SSVSHLALHNLVNSNAKGELKKLIKLKNQVGELSVADTNNY---LKLSRSSEMKVLNKAE 580
Query: 464 IVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPAT 523
+VC T + LS+ F V+IDE+ QA EP L+P+ G KQV LVGD QL
Sbjct: 581 VVCCTCVGAADRRLSQFR--FKTVLIDESTQASEPEVLIPIVKGAKQVILVGDHQQLGPV 638
Query: 524 VISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVED 583
++ A G SLF+RL G+ L+ QYRMHP + FPS FY+ +L++G +D
Sbjct: 639 ILDKKAADAGLKQSLFERLVFLGHVPIRLEVQYRMHPCLSEFPSNMFYEGSLQNGVTSDD 698
Query: 584 Y----TTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLI--SMY 637
+T W P F+ + G+E A S++N E V + KL +
Sbjct: 699 RLIEESTFPWPVIDT--PMMFW-ANYGREELSASGNSYLNRVEAMNVEKIITKLFKDGIK 755
Query: 638 PQLKSSSQLAIISPYRHQ---VKQFQERFKETFGVESQKV-VDITTVDGCQGREKDVAIF 693
P+ Q+ +I+PY Q + QF Q + V+IT+VD QGREKD I
Sbjct: 756 PE-----QIGVITPYEGQRAYLVQFMSVNSTLLDKRDQYLNVEITSVDAFQGREKDFIIL 810
Query: 694 SCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
SCVRA+D +SIGFL+D RR+NV +TRAK ++++G +L ++ WN+L+ ++ CL
Sbjct: 811 SCVRANDSQSIGFLSDPRRLNVALTRAKYGLVILGNPRSLCRNRLWNHLLIHFREKGCL 869
>gi|241955273|ref|XP_002420357.1| ATP-dependent RNA helicase, putative; atp-dependent helicase, SFI
superfamily, putative [Candida dubliniensis CD36]
gi|223643699|emb|CAX41433.1| ATP-dependent RNA helicase, putative [Candida dubliniensis CD36]
Length = 1016
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 139/416 (33%), Positives = 214/416 (51%), Gaps = 28/416 (6%)
Query: 355 PTTGNELKPEVV--NSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + + + S+ + ++LVCAPSN A+D + +L G++ + + + + V
Sbjct: 466 PGTGKTVTSATIIYHLSKLNKQKILVCAPSNVAVDHLAAKLDLLGLKVVRLTAKSREDVE 525
Query: 413 IG---LKAHHSVNSVAIDHLVEQKRDDSAADKQKHGATRKDRDSIRSA---ILNEAVIVC 466
L H+ VN+ A L + + + + G T RS+ ILN++ +VC
Sbjct: 526 SSVSHLALHNLVNNNAKGELKKLIKLKNQVGELSVGDTNNYLKLSRSSELKILNKSEVVC 585
Query: 467 STLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVIS 526
T + LS+ F V+IDE+ QA EP L+P+ G KQV LVGD QL ++
Sbjct: 586 CTCVGAADRRLSQFK--FKTVLIDESTQASEPEVLIPIVKGAKQVILVGDHQQLGPVILD 643
Query: 527 PVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDY-- 584
A G SLF+RL G+ L+ QYRMHP + FPS FY+ +L++G +D
Sbjct: 644 KKAADAGLKQSLFERLVFLGHVPIRLEVQYRMHPCLSEFPSNMFYEGSLQNGVTSDDRLI 703
Query: 585 --TTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLI--SMYPQL 640
+T W P F+ + G+E A S++N E V + KL + P+
Sbjct: 704 EESTFPWPVIDT--PMMFW-ANYGREELSASGNSYLNRVEAMNVEKIITKLFKDGIKPE- 759
Query: 641 KSSSQLAIISPYRHQ---VKQFQERFKETFGVESQKV-VDITTVDGCQGREKDVAIFSCV 696
Q+ +I+PY Q + QF Q + V+IT+VD QGREKD I SCV
Sbjct: 760 ----QIGVITPYEGQRAYLVQFMSVNSTLLDKRDQYLNVEITSVDAFQGREKDFIILSCV 815
Query: 697 RASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
RA+D +SIGFL+D RR+NV +TRAK ++++G +L ++ WN+L+ ++ CL
Sbjct: 816 RANDSQSIGFLSDPRRLNVALTRAKYGLVILGNPRSLCRNRLWNHLLIHFREKGCL 871
>gi|190349039|gb|EDK41614.2| hypothetical protein PGUG_05712 [Meyerozyma guilliermondii ATCC
6260]
Length = 949
Score = 191 bits (485), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 133/408 (32%), Positives = 207/408 (50%), Gaps = 55/408 (13%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLK----AHHSVNSVAIDHLV 430
++LVCAPSN A+D + ++ N G+ K++R+ K A SV+ +++ +L+
Sbjct: 449 KILVCAPSNVAVDHLAEKIANLGV----------KVMRLTAKSREDAESSVSHLSLHNLI 498
Query: 431 EQ--KRDDSAADKQK-------------HGATRKDRDSIRSAILNEAVIVCSTLSFSGSA 475
Q KR DK+ H TRK S+ + + ++CST +G
Sbjct: 499 VQTNKRLQKLQDKKNAEGELSAKEAVEFHKLTRKAEKSV----MEDCEVICSTCVGAGDH 554
Query: 476 LLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYG 535
L + F V+IDE+ QA EP ++P+ G KQV LVGD QL ++ A G
Sbjct: 555 RLDSM--VFRAVLIDESTQASEPEIMIPIVKGAKQVILVGDHQQLGPVILHKKAGDAGLK 612
Query: 536 TSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCF 595
SLF+RL G+ L+ QYRMHP + FPS FY+ +L++G E T ++ F
Sbjct: 613 QSLFERLVVLGHVPIRLEVQYRMHPCLSEFPSNMFYEGSLQNGVSSESRTFKN----ETF 668
Query: 596 GPFSFFDI------HEGKESQPAGSGSWINIDEVDFVLLLFHKLIS-MYPQLKSSSQLAI 648
P+ D + G+E A S++N E V K+I+ ++ Q + Q+ +
Sbjct: 669 -PWPVLDFPMMFWANYGREEISASGYSYLNRVEAMNV----EKIITRLFKQGVKAEQIGV 723
Query: 649 ISPYRHQVKQFQERFKETFGV----ESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSI 704
++PY Q + T + E V++ +VD QGREKD I SCVRA++ I
Sbjct: 724 VTPYEGQRAYILQHMSLTGSLVDKREQYSEVEVASVDAFQGREKDYIILSCVRANETHGI 783
Query: 705 GFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
GFL+D RR+NV +TRAK +++VG L ++K WN+L+ ++ CL
Sbjct: 784 GFLSDSRRLNVALTRAKYGLVIVGNPRCLSKNKLWNHLLIHFREKGCL 831
>gi|68478193|ref|XP_716838.1| hypothetical protein CaO19.8554 [Candida albicans SC5314]
gi|68478314|ref|XP_716778.1| hypothetical protein CaO19.939 [Candida albicans SC5314]
gi|46438461|gb|EAK97791.1| hypothetical protein CaO19.939 [Candida albicans SC5314]
gi|46438523|gb|EAK97852.1| hypothetical protein CaO19.8554 [Candida albicans SC5314]
Length = 1019
Score = 191 bits (485), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 142/419 (33%), Positives = 213/419 (50%), Gaps = 34/419 (8%)
Query: 355 PTTGNELKPEVV--NSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + + + S+ + ++LVCAPSN A+D + +L G+ + + + + V
Sbjct: 464 PGTGKTVTSATIIYHLSKLNKQKILVCAPSNVAVDHLAAKLDLLGLNVVRLTAKSREDVE 523
Query: 413 IG---LKAHHSVNSVA------IDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAV 463
L H+ VNS A + L Q + S AD + K S +LN+A
Sbjct: 524 SSVSHLALHNLVNSNAKGELKKLIKLKNQVGELSVADTNNY---LKLSRSSEMKVLNKAE 580
Query: 464 IVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPAT 523
+VC T + LS+ F V+IDE+ QA EP L+P+ G KQV LVGD QL
Sbjct: 581 VVCCTCVGAADRRLSQFR--FKTVLIDESTQASEPEVLIPIVKGAKQVILVGDHQQLGPV 638
Query: 524 VISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVED 583
++ A G SLF+RL G+ L+ QYRMHP + FPS FY+ +L++G +D
Sbjct: 639 ILDKKAADAGLKQSLFERLVFLGHVPIRLEVQYRMHPCLSEFPSNMFYEGSLQNGVTSDD 698
Query: 584 Y----TTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLI--SMY 637
+T W P F+ + G+E A S++N E V + KL +
Sbjct: 699 RLIEESTFPWPVIDT--PMMFW-ANYGREELSASGNSYLNRVEAMNVEKIITKLFKDGIK 755
Query: 638 PQLKSSSQLAIISPYRHQ---VKQFQERFKETFGVESQKV-VDITTVDGCQGREKDVAIF 693
P+ Q+ +I+PY Q + QF Q + V+IT+VD QGREKD I
Sbjct: 756 PE-----QIGVITPYEGQRAYLVQFMSVNSTLLDKRDQYLNVEITSVDAFQGREKDFIIL 810
Query: 694 SCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
SCVRA+D +SIGFL+D RR+NV +TRAK ++++G +L ++ WN+L+ ++ CL
Sbjct: 811 SCVRANDSQSIGFLSDPRRLNVALTRAKYGLVILGNPRSLCRNRLWNHLLIHFREKGCL 869
>gi|312144201|ref|YP_003995647.1| DNA helicase [Halanaerobium hydrogeniformans]
gi|311904852|gb|ADQ15293.1| DNA helicase [Halanaerobium hydrogeniformans]
Length = 749
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 157/526 (29%), Positives = 246/526 (46%), Gaps = 69/526 (13%)
Query: 258 NASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLREIKRGP 317
N SQ++AI L + F LIQGPPGTGKT T + L+ + + + G +
Sbjct: 265 NQSQIKAIENSLAAEDFYLIQGPPGTGKTVTAVELVLEAVKKGNKVLTTAGSNTAVDNLL 324
Query: 318 ELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFP----TTGNELKPEV---VNSSR 370
EL + + N P V R N + DD +L+ EV +N
Sbjct: 325 ELLIEKDLNVVRVGHPIRVNKKLRKNTL----DDRVLKHHSYIEAEKLRDEVSDLINKQD 380
Query: 371 RYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHH--SVNSVAIDH 428
Y P G+ D+ I+ Y + + HH ++ I+
Sbjct: 381 SY------IYPGGK---------YRRGLSDQEIKEYAERDIE-----HHVRGISPKVINE 420
Query: 429 LVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVI 488
+ S DK + + +++ ILN+A ++CST +GS +L + F++ +
Sbjct: 421 MASWLELQSKIDKYFKQIEKLENEAVED-ILNKADVICSTNITAGSEILKDFH--FNLSV 477
Query: 489 IDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYP 548
IDEA Q+ +PATL+P K V L+GD QLP TVI+ A G SLF+RL +P
Sbjct: 478 IDEATQSTQPATLIPYFMADKSV-LIGDHKQLPPTVINQQAAKGGLAKSLFERLSET-HP 535
Query: 549 ---VKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEY----RCFG----- 596
+ LK QYRM+ ++ F S FYD +L V + D Y +CF
Sbjct: 536 TDALSTLKIQYRMNRKIMGFSSLNFYDGSLRAAPSVAQHNLGDLGVYPQSEKCFTEKALK 595
Query: 597 ---PFSFFDIHEGKESQPA--GSGSWINIDEVDFVLLLFHK--LISMYPQLKSSSQLAII 649
P F D E + S+ + S S+ N E + VL + + ++SM + +A+I
Sbjct: 596 PEYPMVFLDTKEMEASERSLKASNSYDNPVESEIVLDILDRAAMLSM-----DENNIAVI 650
Query: 650 SPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLAD 709
+PY+ QV + T ++I TVD QGREK++ +FS VR++D +IGFL D
Sbjct: 651 TPYKDQVDLLNQHNNLT-------EIEIDTVDAFQGREKEMVVFSAVRSNDDANIGFLRD 703
Query: 710 YRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRV 755
RR+NV +TRAK I+ +G +ST+ + + + NL+ ++ +R+
Sbjct: 704 LRRLNVALTRAKRKIIFIGDSSTICQHQSYKNLLTYIKRVGLYYRL 749
>gi|124802033|ref|XP_001347342.1| regulator of nonsense transcripts, putative [Plasmodium falciparum
3D7]
gi|23494920|gb|AAN35255.1|AE014829_55 regulator of nonsense transcripts, putative [Plasmodium falciparum
3D7]
Length = 1554
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 128/382 (33%), Positives = 193/382 (50%), Gaps = 41/382 (10%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVA--------- 425
+VLV APSN A+D++ +R+ +G+ K+VR+ K+ SV S+A
Sbjct: 832 KVLVTAPSNVAVDQLSVRIHRSGL----------KVVRLCSKSRESVPSIAEYLYLHNQM 881
Query: 426 ----------IDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSA 475
++ L+E K + ++ +K IL EA ++C T +
Sbjct: 882 KLLKTDIAEELNKLLELKEEVGELSQKDERRLKKLILFAEHEILIEADVICCTCVGAMDK 941
Query: 476 LLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYG 535
L K F V++DEA Q+ EP LVPL TG KQ+ LVGD QL ++ A + G G
Sbjct: 942 RLKKFR--FRQVLVDEATQSTEPECLVPLVTGAKQIVLVGDHCQLGPIIVCKKAANAGLG 999
Query: 536 TSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVE--DYTTRD--WHE 591
SLF+RL G L+ QYRMHP + FPS FYD +L++G ++ +Y + W
Sbjct: 1000 KSLFERLVMLGITPFRLEVQYRMHPALSEFPSYVFYDGSLQNGITLKEREYPLKSFPWPN 1059
Query: 592 YRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISP 651
+C P F++ G E A S++N E + L L+ LK SQ+ +I+P
Sbjct: 1060 AKC--PMFFYN-STGLEEMSASGTSYLNRSEASNMEKLVRTLLQC--GLK-PSQIGVITP 1113
Query: 652 YRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYR 711
Y Q F++ ++ +++ +VD QGREKD + SCVR++ K IGFL D R
Sbjct: 1114 YEGQRAYITSLFQKNISFQNSSDIEVASVDAFQGREKDFILLSCVRSNKKLGIGFLNDPR 1173
Query: 712 RMNVGITRAKSSILVVGCASTL 733
R+NV +TRAK +++ G A L
Sbjct: 1174 RLNVALTRAKYGLIICGNAKVL 1195
>gi|343415926|emb|CCD20512.1| hypothetical protein, conserved (fragment) [Trypanosoma vivax Y486]
Length = 794
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 137/398 (34%), Positives = 206/398 (51%), Gaps = 42/398 (10%)
Query: 371 RYRVRVLVCAPSNSALDEIVLRLLNTGI---------RDEN--IRSYTPKIVRIGLKAHH 419
R + RVLVCAPSN+A+D + + I R+EN R YT +G +
Sbjct: 387 RKKTRVLVCAPSNAAVDHLSESMYKNKIDFIRVQPRYREENDSGRPYT-----LGSRVRE 441
Query: 420 SVNSVAIDH----LVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSA 475
+ ++ ++ +V++ + +++ +K D IL E +V T +GS
Sbjct: 442 IMEAMPLNRKKRDIVKRALESGRLSEEEKQLCQKLEDRAVKKILAETRVVACTCIGAGSR 501
Query: 476 LLSKLNHGF--DVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLG 533
L GF D V+IDEA+QA EP TLVPL G KQV LVGD QL V+S VA G
Sbjct: 502 WL----RGFKADFVLIDEASQATEPETLVPLFRGEKQVALVGDHRQLGPVVLSNVAGKKG 557
Query: 534 YGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRD---WH 590
+ SLF+RL AG + L QYR HP + F S FY + DG E W
Sbjct: 558 FARSLFERLAGAGSEITQLNLQYRTHPFIYRFSSMAFYGGTVLDGVPAEKRDASGIFPWP 617
Query: 591 EYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLI---SMYPQLKSSSQLA 647
P F+D +E +G+ S++N E + + ++ ++ P ++
Sbjct: 618 NPE--KPMLFYDCSGVEEVGDSGA-SFLNEAEARATISVVDAVLESGAVRPD-----EVG 669
Query: 648 IISPYRHQVKQFQERFKE--TFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIG 705
IISPYR Q + +ER + T G + + V+I+TVD QGREK++ I SCVR ++++++G
Sbjct: 670 IISPYRAQCEYMRERLLQWGTAGKDIYEKVEISTVDAYQGREKEIIILSCVRNNEERTVG 729
Query: 706 FLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLV 743
F+ D RR+NV +TRA+ ++ +G A LR DK W+ L+
Sbjct: 730 FIGDERRLNVSLTRARRGLIAIGKAEALRGDKCWSKLL 767
Score = 40.4 bits (93), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 258 NASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARV 304
N SQ A+ + L AF LIQGPPGTGKT T + ++ +L RV
Sbjct: 347 NESQQAAV-KAALSNAFTLIQGPPGTGKTSTSVQIIRQLLLRKKTRV 392
>gi|401624314|gb|EJS42376.1| nam7p [Saccharomyces arboricola H-6]
Length = 971
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 137/422 (32%), Positives = 218/422 (51%), Gaps = 43/422 (10%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + S+ +R R+LVCAPSN A+D + +L + G+ K+VR
Sbjct: 432 PGTGKTVTSATIVYHLSKIHRDRILVCAPSNVAVDHLAAKLRDLGL----------KVVR 481
Query: 413 IGLKAHH----SVNSVAIDHLVEQ----------KRDDSAADKQKHGATR--KDRDSIRS 456
+ K+ SV+++A+ +LV + K D + R K +
Sbjct: 482 LTAKSREDVESSVSNLALHNLVGRGAKGELKNLLKLKDEVGELSASDTKRFVKLVRKTEA 541
Query: 457 AILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGD 516
ILN+A +VC T +G +L+ F V+IDE+ QA EP L+P+ G KQV LVGD
Sbjct: 542 EILNKADVVCCTCVGAGD---KRLDTKFRTVLIDESTQASEPECLIPIVKGAKQVILVGD 598
Query: 517 PVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALE 576
QL ++ A G SLF+RL G+ L+ QYRM+P + FPS FY+ +L+
Sbjct: 599 HQQLGPVILERKAADAGLKQSLFERLISLGHVPIRLEVQYRMNPYLSEFPSNMFYEGSLQ 658
Query: 577 DGSDVEDYTTRDWH-EYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLI- 634
+G +E T + + G F + G+E A S++N E + KL
Sbjct: 659 NGVTIEQRTIPNSKFPWPIRGIPMMFWANYGREEISANGTSFLNRIEAMNCERIITKLFR 718
Query: 635 -SMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKV---VDITTVDGCQGREKDV 690
+ P+ Q+ +I+PY Q + + ++ + G + + V++ +VD QGREKD
Sbjct: 719 DGVKPE-----QIGVITPYEGQ-RAYILQYMQMNGSLDKDLYIKVEVASVDAFQGREKDY 772
Query: 691 AIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQD 750
I SCVRA+++++IGFL D RR+NVG+TRAK ++++G +L + WN+L+ ++
Sbjct: 773 IILSCVRANEQQAIGFLRDPRRLNVGLTRAKYGLVILGNPRSLARNTLWNHLLIHFREKG 832
Query: 751 CL 752
CL
Sbjct: 833 CL 834
>gi|18859757|ref|NP_572767.1| Upf1 [Drosophila melanogaster]
gi|27923995|sp|Q9VYS3.2|RENT1_DROME RecName: Full=Regulator of nonsense transcripts 1 homolog
gi|16769416|gb|AAL28927.1| LD30316p [Drosophila melanogaster]
gi|22832121|gb|AAF48115.2| Upf1 [Drosophila melanogaster]
gi|220960128|gb|ACL92600.1| Upf1-PA [synthetic construct]
Length = 1180
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 130/394 (32%), Positives = 217/394 (55%), Gaps = 48/394 (12%)
Query: 376 VLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNS----VAIDHLV- 430
VLVCAPSN+A+D++ ++ T + K+VR+ K+ +++S +A+ + +
Sbjct: 498 VLVCAPSNTAVDQLTEKIHRTNL----------KVVRVCAKSREAIDSPVSFLALHNQIR 547
Query: 431 -----------EQKRDD----SAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSA 475
+Q +D+ S+AD++++ R + + + +L A ++C T +G
Sbjct: 548 NMETNSELKKLQQLKDETGELSSADEKRY---RNLKRAAENQLLEAADVICCTCVGAGDG 604
Query: 476 LLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYG 535
LS++ F ++IDE+ Q+ EP +VP+ G KQ+ LVGD QL V+ A G
Sbjct: 605 RLSRVK--FTSILIDESMQSTEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAARAGLS 662
Query: 536 TSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR-DWHEYRC 594
SLF+RL G L+ QYRMHPE+ FPS FY+ +L++G ED + D+ +
Sbjct: 663 QSLFERLVVLGIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCAEDRRLKLDFPWPQP 722
Query: 595 FGPFSFFDIHEGKESQPAGSG-SWINIDEVDFVLLLFHKLI--SMYPQLKSSSQLAIISP 651
P FF + +G+E + AGSG S++N E V + + + + P+ Q+ II+P
Sbjct: 723 ERPM-FFLVTQGQE-EIAGSGTSFLNRTEAANVEKITTRFLKAGIKPE-----QIGIITP 775
Query: 652 YRHQVKQFQERFKETFGVESQ--KVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLAD 709
Y Q + + + S+ + ++I +VD QGREKD+ I SCVR+++++ IGFL D
Sbjct: 776 YEGQRAYLVQYMQYQGSLHSRLYQEIEIASVDAFQGREKDIIIMSCVRSNERQGIGFLND 835
Query: 710 YRRMNVGITRAKSSILVVGCASTLREDKHWNNLV 743
RR+NV +TRAK I++VG L + + WN+L+
Sbjct: 836 PRRLNVALTRAKFGIIIVGNPKVLAKQQLWNHLL 869
>gi|340053654|emb|CCC47947.1| putative nonsense mRNA reducing factor 1 [Trypanosoma vivax Y486]
Length = 861
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 129/392 (32%), Positives = 190/392 (48%), Gaps = 29/392 (7%)
Query: 371 RYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPK--------IVRIGLKAH---- 418
R + ++LVCAPSN A+D + RL G+ N+ P+ + R+GL
Sbjct: 436 RVKTQILVCAPSNVAVDHLAERLEAAGL---NVVRLQPRCRDVISVAVERLGLDNQVEDF 492
Query: 419 --HSVNSVAIDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSAL 476
S + ++ R + + A +K I ILN+A +VC T +G +
Sbjct: 493 IETSTGHETLKRILGLIRSGENISDEDYNAYKKGTMKIEELILNKADVVCCTCIGAGDSR 552
Query: 477 LSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGT 536
L ++ F V+IDEA Q EP TL+PL G KQVFLVGD QL V S AE G+
Sbjct: 553 LREMR--FKYVLIDEATQGTEPETLIPLVRGAKQVFLVGDHCQLRPVVFSIAAERTGFRR 610
Query: 537 SLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDG---SDVEDYTTRDWHEYR 593
SLF+RL G+ L QYRMHP + F S FY+ L++G + W +
Sbjct: 611 SLFERLLMMGHRPLRLDVQYRMHPCLSLFISHHFYEGTLQNGVTEGQRDALQVFPWPDGT 670
Query: 594 CFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYR 653
PF F++ G E A S++N E + KLI S + +I+PYR
Sbjct: 671 --RPFFFYN-STGPEELGANGSSYLNRTEAALAEQVVTKLIR--DGGVSPDGIGVITPYR 725
Query: 654 HQVKQFQERFKET--FGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYR 711
Q + + + V++++VD QGREK+ IFSCVR++ ++ IGF D R
Sbjct: 726 SQCRFLRNYLSRCGFLPASTYDRVEVSSVDAFQGREKEFIIFSCVRSNHRQGIGFAVDGR 785
Query: 712 RMNVGITRAKSSILVVGCASTLREDKHWNNLV 743
R+NV +TRAK ++++G +WN L+
Sbjct: 786 RLNVSLTRAKRGLIIMGNVQLFSRYPNWNELL 817
Score = 40.8 bits (94), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 256 NHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAI 296
N N SQ +A+ L +K LIQGPPGTGKT T + ++S +
Sbjct: 394 NLNNSQEQAVRTAL-KKPLTLIQGPPGTGKTSTSVAIVSQL 433
>gi|195396575|ref|XP_002056906.1| GJ16782 [Drosophila virilis]
gi|194146673|gb|EDW62392.1| GJ16782 [Drosophila virilis]
Length = 1219
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 132/395 (33%), Positives = 217/395 (54%), Gaps = 50/395 (12%)
Query: 376 VLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNS----VAIDHLV- 430
VLVCAPSN+A+D++ ++ T + K+VR+ K+ +++S +A+ + +
Sbjct: 508 VLVCAPSNTAVDQLTEKIHRTNL----------KVVRVCAKSREAIDSPVSFLALHNQIR 557
Query: 431 -----------EQKRDD----SAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSA 475
+Q +D+ S+AD++++ R + + +L A ++C T +G
Sbjct: 558 NMETNSELKKLQQLKDETGELSSADEKRY---RSLKRGTENQLLEAADVICCTCVGAGDV 614
Query: 476 LLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYG 535
LS++ F ++IDE+ Q+ EP +VP+ G KQ+ LVGD QL V+ A G
Sbjct: 615 RLSRIK--FTSILIDESMQSTEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAARAGLS 672
Query: 536 TSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR-DWHEYRC 594
SLF+RL G L+ QYRMHPE+ FPS FY+ +L++G ED + D+ +
Sbjct: 673 QSLFERLVVLGIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCAEDRRLKLDFPWPQP 732
Query: 595 FGPFSFFDIHEGKESQPAGSG-SWINIDEVDFVLLLFHKLISMYPQLKSS---SQLAIIS 650
P FF + +G+E + AGSG S++N E V K+ + + LK+ Q+ II+
Sbjct: 733 ERPM-FFLVTQGQE-EIAGSGTSFLNRTEAANV----EKITTRF--LKAGIKPEQIGIIT 784
Query: 651 PYRHQVKQFQERFKETFGVESQ--KVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLA 708
PY Q + + + S+ + ++I +VD QGREKD+ I SCVR+++++ IGFL
Sbjct: 785 PYEGQRAYLVQYMQYQGSLHSRLYQEIEIASVDAFQGREKDIIIMSCVRSNERQGIGFLN 844
Query: 709 DYRRMNVGITRAKSSILVVGCASTLREDKHWNNLV 743
D RR+NV +TRAK I++VG L + + WN+L+
Sbjct: 845 DPRRLNVALTRAKYGIIIVGNPKVLAKQQLWNHLL 879
>gi|194889307|ref|XP_001977057.1| GG18821 [Drosophila erecta]
gi|190648706|gb|EDV45984.1| GG18821 [Drosophila erecta]
Length = 1186
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 132/395 (33%), Positives = 218/395 (55%), Gaps = 50/395 (12%)
Query: 376 VLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNS----VAIDHLV- 430
VLVCAPSN+A+D++ ++ T + K+VR+ K+ +++S +A+ + +
Sbjct: 498 VLVCAPSNTAVDQLTEKIHRTNL----------KVVRVCAKSREAIDSPVSFLALHNQIR 547
Query: 431 -----------EQKRDD----SAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSA 475
+Q +D+ S+AD++++ R + + + +L A ++C T +G
Sbjct: 548 NMETNSELKKLQQLKDETGELSSADEKRY---RILKRAAENQLLEAADVICCTCVGAGDG 604
Query: 476 LLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYG 535
LS++ F ++IDE+ Q+ EP +VP+ G KQ+ LVGD QL V+ A G
Sbjct: 605 RLSRIK--FTSILIDESMQSTEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAARAGLS 662
Query: 536 TSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR-DWHEYRC 594
SLF+RL G L+ QYRMHPE+ FPS FY+ +L++G ED + D+ +
Sbjct: 663 QSLFERLVVLGIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCAEDRRLKLDFPWPQP 722
Query: 595 FGPFSFFDIHEGKESQPAGSG-SWINIDEVDFVLLLFHKLISMYPQLKSS---SQLAIIS 650
P FF + +G+E + AGSG S++N E V K+ + + LK+ Q+ II+
Sbjct: 723 ERPM-FFLVTQGQE-EIAGSGTSFLNRTEAANV----EKITTRF--LKAGIKPEQIGIIT 774
Query: 651 PYRHQVKQFQERFKETFGVESQ--KVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLA 708
PY Q + + + S+ + ++I +VD QGREKD+ I SCVR+++++ IGFL
Sbjct: 775 PYEGQRAYLVQYMQYQGSLHSRLYQEIEIASVDAFQGREKDIIIMSCVRSNERQGIGFLN 834
Query: 709 DYRRMNVGITRAKSSILVVGCASTLREDKHWNNLV 743
D RR+NV +TRAK I++VG L + + WN+L+
Sbjct: 835 DPRRLNVALTRAKYGIIIVGNPKVLAKQQLWNHLL 869
>gi|195131883|ref|XP_002010374.1| GI14718 [Drosophila mojavensis]
gi|193908824|gb|EDW07691.1| GI14718 [Drosophila mojavensis]
Length = 1187
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 129/394 (32%), Positives = 218/394 (55%), Gaps = 48/394 (12%)
Query: 376 VLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNS----VAIDHLV- 430
VLVCAPSN+A+D++ ++ T + K+VR+ K+ +++S +A+ + +
Sbjct: 505 VLVCAPSNTAVDQLTEKIHRTNL----------KVVRVCAKSREAIDSPVSFLALHNQIR 554
Query: 431 -----------EQKRDD----SAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSA 475
+Q +D+ S+AD++++ + ++ ++ +L A ++C T +G
Sbjct: 555 NMETNSELKKLQQLKDETGELSSADEKRYRSLKRGAEN---QLLEAADVICCTCVGAGDM 611
Query: 476 LLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYG 535
LS++ F ++IDE+ Q+ EP +VP+ G KQ+ LVGD QL V+ A G
Sbjct: 612 RLSRIK--FTSILIDESMQSTEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAARAGLS 669
Query: 536 TSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR-DWHEYRC 594
SLF+RL G L+ QYRMHPE+ FPS FY+ +L++G ED + D+ +
Sbjct: 670 QSLFERLVVLGIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCAEDRRLKLDFPWPQP 729
Query: 595 FGPFSFFDIHEGKESQPAGSG-SWINIDEVDFVLLLFHKLI--SMYPQLKSSSQLAIISP 651
P FF + +G+E + AGSG S++N E V + + + + P+ Q+ II+P
Sbjct: 730 ERPM-FFLVTQGQE-EIAGSGTSFLNRTEAANVEKITTRFLKAGIKPE-----QIGIITP 782
Query: 652 YRHQVKQFQERFKETFGVESQ--KVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLAD 709
Y Q + + + S+ + ++I +VD QGREKD+ I SCVR+++++ IGFL D
Sbjct: 783 YEGQRAYLVQYMQYQGSLHSRLYQEIEIASVDAFQGREKDIIIMSCVRSNERQGIGFLND 842
Query: 710 YRRMNVGITRAKSSILVVGCASTLREDKHWNNLV 743
RR+NV +TRAK I++VG L + + WN+L+
Sbjct: 843 PRRLNVALTRAKYGIIIVGNPKVLAKQQLWNHLL 876
>gi|308807118|ref|XP_003080870.1| RENT1_NEUCR Regulator of nonsense transcripts 1 homolog
ref|XP_323582.1| h (ISS) [Ostreococcus tauri]
gi|116059331|emb|CAL55038.1| RENT1_NEUCR Regulator of nonsense transcripts 1 homolog
ref|XP_323582.1| h (ISS) [Ostreococcus tauri]
Length = 1084
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 129/384 (33%), Positives = 188/384 (48%), Gaps = 56/384 (14%)
Query: 376 VLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQKRD 435
+L + SN A+D +V L G+R I P+ VR L + + ID +
Sbjct: 639 ILCTSDSNIAVDNLVDGLARAGVRVARIGR--PEAVRQDLMPYMIESIAGIDQDCRWSKS 696
Query: 436 DSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQA 495
D +I +A L +A ++C+T + +GS +L + + F +IDEA QA
Sbjct: 697 DQF-------------QAINNA-LRKAEVICATCAGAGSDILERFS--FQACLIDEATQA 740
Query: 496 VEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQ 555
EPAT++PL GCKQV L+GD QLP T+IS AE G G SLF+RL R+G MLK Q
Sbjct: 741 TEPATIIPLTKGCKQVVLIGDQNQLPPTIISREAEAAGLGESLFERLIRSGIRTYMLKVQ 800
Query: 556 YRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSG 615
YRMHP + FPS+ FY + + GPF G+ + G
Sbjct: 801 YRMHPAIALFPSQTFYKVSCYRVHRRVSVVR----QSVLTGPFPQSPWPRGEHREELAGG 856
Query: 616 SWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQE----------RFKE 665
H+++ + +++PY Q + ++ RF
Sbjct: 857 ---------------HEVL--------PGDIGVVTPYSAQARAIKKILRGNAPERTRFDA 893
Query: 666 TFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSIL 725
S K V++ TVDG QGREK+V IFSC RA+ ++GFLAD RR+NV +TRAK ++
Sbjct: 894 PADPTSMKAVEVATVDGFQGREKEVIIFSCTRANMNGNVGFLADTRRVNVMLTRAKRGLI 953
Query: 726 VVGCASTLREDK-HWNNLVKSAEK 748
+VG TL++D+ W +K A +
Sbjct: 954 IVGHMKTLQQDEIVWKGWLKWARE 977
Score = 43.1 bits (100), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 32/59 (54%), Gaps = 7/59 (11%)
Query: 240 DQSWKIPGLLHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILH 298
DQ+ IP + H N SQ++A+ L + LIQGPPGTGKT T + L+ L
Sbjct: 582 DQAKDIPAMQH------MNQSQIDALMAALFNR-ITLIQGPPGTGKTHTAVALVQMWLR 633
>gi|195553850|ref|XP_002076779.1| GD24645 [Drosophila simulans]
gi|194202769|gb|EDX16345.1| GD24645 [Drosophila simulans]
Length = 1180
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 130/394 (32%), Positives = 217/394 (55%), Gaps = 48/394 (12%)
Query: 376 VLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNS----VAIDHLV- 430
VLVCAPSN+A+D++ ++ T + K+VR+ K+ +++S +A+ + +
Sbjct: 498 VLVCAPSNTAVDQLTEKIHRTNL----------KVVRVCAKSREAIDSPVSFLALHNQIR 547
Query: 431 -----------EQKRDD----SAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSA 475
+Q +D+ S+AD++++ R + + + +L A ++C T +G
Sbjct: 548 NMETNSELKKLQQLKDETGELSSADEKRY---RSLKRASENQLLEAADVICCTCVGAGDG 604
Query: 476 LLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYG 535
LS++ F ++IDE+ Q+ EP +VP+ G KQ+ LVGD QL V+ A G
Sbjct: 605 RLSRVK--FTSILIDESMQSTEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAARAGLS 662
Query: 536 TSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR-DWHEYRC 594
SLF+RL G L+ QYRMHPE+ FPS FY+ +L++G ED + D+ +
Sbjct: 663 QSLFERLVVLGIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCAEDRRLKLDFPWPQP 722
Query: 595 FGPFSFFDIHEGKESQPAGSG-SWINIDEVDFVLLLFHKLI--SMYPQLKSSSQLAIISP 651
P FF + +G+E + AGSG S++N E V + + + + P+ Q+ II+P
Sbjct: 723 ERPM-FFLVTQGQE-EIAGSGTSFLNRTEAANVEKITTRFLKAGIKPE-----QIGIITP 775
Query: 652 YRHQVKQFQERFKETFGVESQ--KVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLAD 709
Y Q + + + S+ + ++I +VD QGREKD+ I SCVR+++++ IGFL D
Sbjct: 776 YEGQRAYLVQYMQYQGSLHSRLYQEIEIASVDAFQGREKDIIIMSCVRSNERQGIGFLND 835
Query: 710 YRRMNVGITRAKSSILVVGCASTLREDKHWNNLV 743
RR+NV +TRAK I++VG L + + WN+L+
Sbjct: 836 PRRLNVALTRAKFGIIIVGNPKVLAKQQLWNHLL 869
>gi|195356067|ref|XP_002044503.1| GM13241 [Drosophila sechellia]
gi|194131805|gb|EDW53739.1| GM13241 [Drosophila sechellia]
Length = 1180
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 130/394 (32%), Positives = 217/394 (55%), Gaps = 48/394 (12%)
Query: 376 VLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNS----VAIDHLV- 430
VLVCAPSN+A+D++ ++ T + K+VR+ K+ +++S +A+ + +
Sbjct: 498 VLVCAPSNTAVDQLTEKIHRTNL----------KVVRVCAKSREAIDSPVSFLALHNQIR 547
Query: 431 -----------EQKRDD----SAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSA 475
+Q +D+ S+AD++++ R + + + +L A ++C T +G
Sbjct: 548 NMETNSELKKLQQLKDETGELSSADEKRY---RSLKRASENQLLEAADVICCTCVGAGDG 604
Query: 476 LLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYG 535
LS++ F ++IDE+ Q+ EP +VP+ G KQ+ LVGD QL V+ A G
Sbjct: 605 RLSRVK--FTSILIDESMQSTEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAARAGLS 662
Query: 536 TSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR-DWHEYRC 594
SLF+RL G L+ QYRMHPE+ FPS FY+ +L++G ED + D+ +
Sbjct: 663 QSLFERLVVLGIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCAEDRRLKLDFPWPQP 722
Query: 595 FGPFSFFDIHEGKESQPAGSG-SWINIDEVDFVLLLFHKLI--SMYPQLKSSSQLAIISP 651
P FF + +G+E + AGSG S++N E V + + + + P+ Q+ II+P
Sbjct: 723 ERPM-FFLVTQGQE-EIAGSGTSFLNRTEAANVEKITTRFLKAGIKPE-----QIGIITP 775
Query: 652 YRHQVKQFQERFKETFGVESQ--KVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLAD 709
Y Q + + + S+ + ++I +VD QGREKD+ I SCVR+++++ IGFL D
Sbjct: 776 YEGQRAYLVQYMQYQGSLHSRLYQEIEIASVDAFQGREKDIIIMSCVRSNERQGIGFLND 835
Query: 710 YRRMNVGITRAKSSILVVGCASTLREDKHWNNLV 743
RR+NV +TRAK I++VG L + + WN+L+
Sbjct: 836 PRRLNVALTRAKFGIIIVGNPKVLAKQQLWNHLL 869
>gi|388852346|emb|CCF53961.1| probable NAM7-nonsense-mediated mRNA decay protein [Ustilago
hordei]
Length = 1091
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 129/404 (31%), Positives = 209/404 (51%), Gaps = 49/404 (12%)
Query: 376 VLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNS------------ 423
VLVCAPSN A+D++ ++ TG+ K+VR+ K+ +++S
Sbjct: 529 VLVCAPSNVAVDQLCEKIHLTGL----------KVVRLSAKSREALDSPISFLTLHEQVA 578
Query: 424 -----VAIDHLVEQKRDD---SAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSA 475
+ + L++ K + S++D++K+ A + + IL+ A ++C T G
Sbjct: 579 NNDTHIELQKLIQLKNEQGELSSSDERKYKALTR---ACEKEILSTADVICCTCVGCGDP 635
Query: 476 LLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYG 535
LSK+ F V++DEA QA EP ++PL GCKQV VGD +QL +++ A G
Sbjct: 636 RLSKIK--FRTVLVDEATQAAEPEVMIPLVMGCKQVVFVGDHLQLGPVIMNKKAARAGLS 693
Query: 536 TSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR--DWHEYR 593
SLF+RL G L+ QYRMHP + FPS FY+ L++G + R D+
Sbjct: 694 QSLFERLIMLGNRPIRLQVQYRMHPCLSEFPSNMFYEGTLQNGVTAPERLRREVDFPWPV 753
Query: 594 CFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLK-SSSQLAIISPY 652
+ P FF + G+E + S++N E V K+++ + + SQ+ I++PY
Sbjct: 754 PWLPMFFFQ-NLGQEEISSSGTSFLNRTEASNV----EKIVTRFFKAGVKPSQIGIVTPY 808
Query: 653 RHQ----VKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLA 708
Q V Q + E K V++ +VD QGREKD I SCVR+++ + IGFL+
Sbjct: 809 EGQRSYIVNHMQ--LHGSLKKELYKQVEVASVDAFQGREKDYIILSCVRSNEHQGIGFLS 866
Query: 709 DYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
D RR+NV +TRA+ ++++G L + W+ L+ +++ CL
Sbjct: 867 DPRRLNVALTRARYGLVILGNPKVLNKHPLWHYLLVHYKEKGCL 910
>gi|414591179|tpg|DAA41750.1| TPA: hypothetical protein ZEAMMB73_134729 [Zea mays]
Length = 1030
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 104/276 (37%), Positives = 150/276 (54%), Gaps = 3/276 (1%)
Query: 484 FDVVIIDEAAQAVEPATLVPLAT-GCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRL 542
D++I+DEAAQ E TL+PL G +Q VGD QLPA V S +++ +G S+F+RL
Sbjct: 709 LDMLIVDEAAQLKECETLIPLQLPGIRQAVFVGDEYQLPALVRSKISDGANFGRSVFERL 768
Query: 543 QRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYT-TRDWHEYRCFGPFSFF 601
GY +L QYRMHPE+ FP FYD L DG +V + R + + FGP+SF
Sbjct: 769 SSLGYGKYLLNVQYRMHPEISRFPVATFYDGKLSDGPNVTSMSYERTFLASKVFGPYSFI 828
Query: 602 DIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQE 661
++ G+E+ S N EV VL + +L + ++SPY QV+ +
Sbjct: 829 NVDGGRETTEKHGTSLKNTVEVAAVLRIVQRLFKESVSTGCKLSVGVVSPYNAQVRAICQ 888
Query: 662 RFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAK 721
+ E++ V + +VDG QG E+DV I S VR++ S+GFL + +R NV +TRAK
Sbjct: 889 KVGESYNAHDGFSVKVKSVDGFQGAEEDVLIISTVRSNGAGSVGFLTNLQRTNVALTRAK 948
Query: 722 SSILVVGCASTLREDKH-WNNLVKSAEKQDCLFRVS 756
+ +VG +TL K W +VK A + C F S
Sbjct: 949 HCLWIVGNGATLSSSKSVWQKIVKDARDRGCYFEAS 984
>gi|50286349|ref|XP_445603.1| hypothetical protein [Candida glabrata CBS 138]
gi|49524908|emb|CAG58514.1| unnamed protein product [Candida glabrata]
Length = 964
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 136/425 (32%), Positives = 218/425 (51%), Gaps = 49/425 (11%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + S+ + R+LVCAPSN A+D + +L + G+ K+VR
Sbjct: 431 PGTGKTVTSASIVYHLSKIRKDRILVCAPSNIAVDHLAAKLRDLGL----------KVVR 480
Query: 413 IGLKAHH----SVNSVAIDHLV---------------EQKRDDSAADKQKHGATRKDRDS 453
+ K+ SV+S+A+ +LV E+ + SA D ++ + K +
Sbjct: 481 VTAKSREDVESSVSSLALHNLVAKGAKGVLKKLLKLKEEAGELSARDTKRFISLVKKTEK 540
Query: 454 IRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFL 513
+IL +A +VC T +G +L+ F V+IDE+ QA EP L+P+ G KQV L
Sbjct: 541 ---SILEQADVVCCTCVGAGD---RRLDMKFRTVLIDESTQASEPECLIPIVKGAKQVIL 594
Query: 514 VGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDE 573
VGD QL ++ A G SLF+RL G+ L+ QYRM+P + FPS FY+
Sbjct: 595 VGDHQQLGPVILERKASDAGLKQSLFERLISLGHIPIRLEVQYRMNPFLSEFPSNMFYEG 654
Query: 574 ALEDGSDVEDYT-TRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHK 632
+L++G E T + G F + G E A S++N E + +
Sbjct: 655 SLQNGVTEEQRTLANSTFPWPINGIPMMFWANYGSEEMSANGTSYLNRTEAMNCERIITR 714
Query: 633 LI--SMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKV---VDITTVDGCQGRE 687
L + P+ Q+ +I+PY Q + + ++ + G +++ V++ +VD QGRE
Sbjct: 715 LFRDGVKPE-----QIGVITPYEGQ-RAYVLQYMQMNGALDKELYSNVEVASVDAFQGRE 768
Query: 688 KDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAE 747
KD I SCVRA++++ IGFL D RR+NVG+TRAK ++++G +L + WN+L+
Sbjct: 769 KDFIILSCVRANEQQMIGFLRDPRRLNVGLTRAKYGLIILGNPRSLSRNTLWNHLLLHFR 828
Query: 748 KQDCL 752
++ CL
Sbjct: 829 QKGCL 833
>gi|354544687|emb|CCE41413.1| hypothetical protein CPAR2_304020 [Candida parapsilosis]
Length = 1049
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 138/416 (33%), Positives = 210/416 (50%), Gaps = 28/416 (6%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + S+ + ++LVCAPSN A+D + +L G++ + + + + V
Sbjct: 477 PGTGKTVTSATIVYHLSKLNKEKILVCAPSNVAVDHLAAKLDLLGLKVVRLTAKSREDVE 536
Query: 413 --IG-LKAHHSVNSVA---IDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVC 466
+G L H+ VN + + L++ K + + K S ILN+ +VC
Sbjct: 537 SSVGHLALHNIVNKTSKGELKKLIKLKNEVGELSSEDSKKYIKHLRSSELKILNKCDVVC 596
Query: 467 STLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVIS 526
T + LS+ F V++DE+ QA EP L+P+ G KQV LVGD QL ++
Sbjct: 597 CTCVGAADKRLSQFK--FRTVLVDESTQASEPEVLIPIVKGAKQVILVGDHQQLGPVILD 654
Query: 527 PVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTT 586
A G SLF+RL G+ L+ QYRMHP + FPS FY+ +L+DG D
Sbjct: 655 RKAADAGLKQSLFERLVFLGHIPIRLEVQYRMHPCLSEFPSNMFYEGSLQDGVTNADRLV 714
Query: 587 RD----WHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLI--SMYPQL 640
D W P F+ + G+E + S++N E V + +L + P+
Sbjct: 715 ADSSFPWPVVDT--PMMFW-ANYGREELSSSGNSYLNRVEAMNVERIITRLFKDGIKPE- 770
Query: 641 KSSSQLAIISPYRHQ---VKQFQERFKETFGVESQKV-VDITTVDGCQGREKDVAIFSCV 696
Q+ +I+PY Q + QF + + V+IT+VD QGREKD I SCV
Sbjct: 771 ----QIGVITPYEGQRAYLVQFMSMNSTLLSKRDEYLEVEITSVDAFQGREKDFIILSCV 826
Query: 697 RASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
RA+D +SIGFL+D RR+NV +TRAK +LV+G L ++ WN+L+ ++ CL
Sbjct: 827 RANDSQSIGFLSDPRRLNVALTRAKYGLLVLGNPRALSRNRLWNHLLVHFREKGCL 882
>gi|409042883|gb|EKM52366.1| hypothetical protein PHACADRAFT_186519 [Phanerochaete carnosa
HHB-10118-sp]
Length = 953
Score = 190 bits (482), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 135/347 (38%), Positives = 178/347 (51%), Gaps = 51/347 (14%)
Query: 433 KRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEA 492
+R + DK KH A +D I + +++ A IVC+T S S+ L ++ F +V IDEA
Sbjct: 504 ERQRAGCDK-KHYAVWRD---ILTDVVSRADIVCTTCISSASSALDVVD--FPLVFIDEA 557
Query: 493 AQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGY-PVKM 551
+ + EPA+L+PL G + V +GD QLP + SP A+ G G SLF+RL + P M
Sbjct: 558 SMSTEPASLIPLMKGSQHVAFIGDHKQLPPVITSPEAQAGGLGVSLFERLSEENFLPSIM 617
Query: 552 LKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYT---------TRDWHE----------- 591
L QYRMHP + FPS EFYD L DG+ E +R + E
Sbjct: 618 LDIQYRMHPTISCFPSHEFYDRELRDGTVDETGKVVPGLVPPESRIYQELQTSLRASSAG 677
Query: 592 ----YRCFG----PFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSS 643
R G P F H G ES A S +N +EV V L L+ P L
Sbjct: 678 LNTNLRHLGADGRPSVVFLDHVGAES--AKDRSRVNWNEVHIVCSLVEDLMLRNPLLP-G 734
Query: 644 SQLAIISPYRHQV----------KQFQERFKETFGVESQ---KVVDITTVDGCQGREKDV 690
SQ+ II+PY Q+ K + ERF+ G + V+I TVDG +GREK+V
Sbjct: 735 SQIGIIAPYAAQITLLTRLLTIDKNYAERFESVLGPQRAMDLANVEIKTVDGFEGREKEV 794
Query: 691 AIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDK 737
IFS VR + IGFLAD RR+NVG+TRAK + VVG STL+ K
Sbjct: 795 IIFSTVRNNSNGHIGFLADRRRLNVGLTRAKRGLFVVGSISTLKIGK 841
>gi|349580361|dbj|GAA25521.1| K7_Nam7p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 971
Score = 189 bits (481), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 136/422 (32%), Positives = 218/422 (51%), Gaps = 43/422 (10%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + S+ ++ R+LVCAPSN A+D + +L + G+ K+VR
Sbjct: 432 PGTGKTVTSATIVYHLSKIHKDRILVCAPSNVAVDHLAAKLRDLGL----------KVVR 481
Query: 413 IGLKAHH----SVNSVAIDHLVEQ----------KRDDSAADKQKHGATR--KDRDSIRS 456
+ K+ SV+++A+ +LV + K D + R K +
Sbjct: 482 LTAKSREDVESSVSNLALHNLVGRGAKGELKNLLKLKDEVGELSASDTKRFVKLVRKTEA 541
Query: 457 AILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGD 516
ILN+A +VC T +G +L+ F V+IDE+ QA EP L+P+ G KQV LVGD
Sbjct: 542 EILNKADVVCCTCVGAGD---KRLDTKFRTVLIDESTQASEPECLIPIVKGAKQVILVGD 598
Query: 517 PVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALE 576
QL ++ A G SLF+RL G+ L+ QYRM+P + FPS FY+ +L+
Sbjct: 599 HQQLGPVILERKAADAGLKQSLFERLISLGHVPIRLEVQYRMNPYLSEFPSNMFYEGSLQ 658
Query: 577 DGSDVEDYTTRDWH-EYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLI- 634
+G +E T + + G F + G+E A S++N E + KL
Sbjct: 659 NGVTIEQRTVPNSKFPWPIRGIPMMFWANYGREEISANGTSFLNRIEAMNCERIITKLFR 718
Query: 635 -SMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKV---VDITTVDGCQGREKDV 690
+ P+ Q+ +I+PY Q + + ++ + G + + V++ +VD QGREKD
Sbjct: 719 DGVKPE-----QIGVITPYEGQ-RAYILQYMQMNGSLDKDLYIKVEVASVDAFQGREKDY 772
Query: 691 AIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQD 750
I SCVRA+++++IGFL D RR+NVG+TRAK ++++G +L + WN+L+ ++
Sbjct: 773 IILSCVRANEQQAIGFLRDPRRLNVGLTRAKYGLVILGNPRSLARNTLWNHLLIHFREKG 832
Query: 751 CL 752
CL
Sbjct: 833 CL 834
>gi|417407073|gb|JAA50163.1| Putative dna helicase [Desmodus rotundus]
Length = 2735
Score = 189 bits (481), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 122/347 (35%), Positives = 188/347 (54%), Gaps = 29/347 (8%)
Query: 426 IDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHG-- 483
I H+ +++++ ++ K+ G +K +S I+ E+ I+C TLS SG LL G
Sbjct: 2178 IAHVSKERQELASKIKEVQGRPQK----TQSIIILESHIICCTLSTSGGLLLESAFRGQG 2233
Query: 484 ---FDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFK 540
F VI+DEA QA E TL PL C ++ LVGDP QLP TVIS A+ GY S+
Sbjct: 2234 GVPFSCVIVDEAGQACEVETLTPLIHRCNKLILVGDPKQLPPTVISLKAQEYGYDQSMMA 2293
Query: 541 RLQR-----------AGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDW 589
R + PV L QYRMHP++ FPS Y L+ E T R
Sbjct: 2294 RFCKLLEENVEHNVSGRLPVLQLNVQYRMHPDICLFPSNYVYSRNLKTNRVTE--TIRCS 2351
Query: 590 HEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAII 649
E+ F P+ FD+ +G E + + S++N+ E+ V+ L KL+ + + + II
Sbjct: 2352 SEWP-FQPYLVFDVGDGLERR--DNDSYVNVQEIKVVIELI-KLLKDKRKDVTFRNVGII 2407
Query: 650 SPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASD-KKSIGFLA 708
+ Y+ Q Q+ + F E + + ++ TVD QGR+KD I +CVRA+ + SIGFLA
Sbjct: 2408 THYKAQKMMIQKELDKEF--EGKGLAEVDTVDAFQGRQKDCIIVTCVRANAVQGSIGFLA 2465
Query: 709 DYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRV 755
+R+ V ITRAK S+ ++G TL +++HWN+L++ A+++ + +
Sbjct: 2466 SLQRLTVAITRAKYSLFILGHLRTLMDNQHWNHLIQDAQRRGAIIKT 2512
>gi|170097065|ref|XP_001879752.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164645155|gb|EDR09403.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 829
Score = 189 bits (481), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 150/469 (31%), Positives = 219/469 (46%), Gaps = 88/469 (18%)
Query: 376 VLVCAPSNSALDEIVLRLLNTGIRDENI-------RSYTPKIVRIGLKAHH--------- 419
+LVC +N A+D +V L+N G++ + S P + L+ H
Sbjct: 348 ILVCTYTNVAVDNLVEGLVNAGVKALRVGFGGSIKESLRPHSLDTKLEEHRLQKTLKAQI 407
Query: 420 ----------------------SVNSVAIDHLVEQKRDDSAA---DKQKHGATRKDRDSI 454
++S + LVE++++ A +++ T+ SI
Sbjct: 408 KEKDDLQVKMDDLEARLRDVQDKISSTSTGRLVEKEQNMKKALVSMQKQFAVTKMKVYSI 467
Query: 455 RSAIL----NEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQ 510
+ +L N A +C+T S L+ + F VV +DEA+ + EPA+L+P+ G +
Sbjct: 468 QQEMLRDVVNAADAICTTCITSACMALNVTD--FPVVFLDEASMSTEPASLIPIMKGSRH 525
Query: 511 VFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQ-RAGYPVKMLKTQYRMHPEVRSFPSRE 569
V L+GD QLP +IS A+ LG G SLF+RL A P ML QYRMHP + FPS E
Sbjct: 526 VALIGDHKQLPPVIISREAQALGLGMSLFERLTGEAAVPSVMLDVQYRMHPAISRFPSHE 585
Query: 570 FYDEALEDGS------DVEDYTTRDWHEYRCF-----GPFSFFDIHEGKESQPAGSGSWI 618
FY+ AL DG+ + + D H R P F H G ES S +
Sbjct: 586 FYNRALLDGTVDVFGNAIPRLSPPDSHYLRPHVETGASPSIVFLDHAGDES--VKDRSRV 643
Query: 619 NIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVK----------QFQERFKETFG 668
N +E V + L+ P L+ S + II+PY Q+ +Q RFKE G
Sbjct: 644 NRNEAYIVASVVEDLLLNNPHLRGSD-IGIIAPYVAQISLLTRLFNTDATYQARFKEVLG 702
Query: 669 ---VESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSIL 725
++I TVDG +GREK+V IFS VR + IGFLAD RR+NVG+TRAK ++
Sbjct: 703 DHRAMQLPHIEIKTVDGFEGREKEVIIFSTVRNNAGGYIGFLADKRRLNVGLTRAKRGLI 762
Query: 726 VVGCASTLREDKHWNNLVKSAEKQDCLFRVSKP------YASFFSDENL 768
VVG +TL+ K + ++ + RV K YA F ++ L
Sbjct: 763 VVGSINTLKSS-------KMSGGENAVIRVGKGAESWRRYARFLTERGL 804
>gi|151946238|gb|EDN64469.1| nuclear accommodation of mitochondria [Saccharomyces cerevisiae
YJM789]
Length = 971
Score = 189 bits (481), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 136/422 (32%), Positives = 218/422 (51%), Gaps = 43/422 (10%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + S+ ++ R+LVCAPSN A+D + +L + G+ K+VR
Sbjct: 432 PGTGKTVTSATIVYHLSKIHKDRILVCAPSNVAVDHLAAKLRDLGL----------KVVR 481
Query: 413 IGLKAHH----SVNSVAIDHLVEQ----------KRDDSAADKQKHGATR--KDRDSIRS 456
+ K+ SV+++A+ +LV + K D + R K +
Sbjct: 482 LTAKSREDVESSVSNLALHNLVGRGAKGELKNLLKLKDEVGELSASDTKRFVKLVRKTEA 541
Query: 457 AILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGD 516
ILN+A +VC T +G +L+ F V+IDE+ QA EP L+P+ G KQV LVGD
Sbjct: 542 EILNKADVVCCTCVGAGD---KRLDTKFRTVLIDESTQASEPECLIPIVKGAKQVILVGD 598
Query: 517 PVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALE 576
QL ++ A G SLF+RL G+ L+ QYRM+P + FPS FY+ +L+
Sbjct: 599 HQQLGPVILERKAADAGLKQSLFERLISLGHVPIRLEVQYRMNPYLSEFPSNMFYEGSLQ 658
Query: 577 DGSDVEDYTTRDWH-EYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLI- 634
+G +E T + + G F + G+E A S++N E + KL
Sbjct: 659 NGVTIEQRTVPNSKFPWPIRGIPMMFWANYGREEISANGTSFLNRIEAMNCERIITKLFR 718
Query: 635 -SMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKV---VDITTVDGCQGREKDV 690
+ P+ Q+ +I+PY Q + + ++ + G + + V++ +VD QGREKD
Sbjct: 719 DGVKPE-----QIGVITPYEGQ-RAYILQYMQMNGSLDKDLYIKVEVASVDAFQGREKDY 772
Query: 691 AIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQD 750
I SCVRA+++++IGFL D RR+NVG+TRAK ++++G +L + WN+L+ ++
Sbjct: 773 IILSCVRANEQQAIGFLRDPRRLNVGLTRAKYGLVILGNPRSLARNTLWNHLLIHFREKG 832
Query: 751 CL 752
CL
Sbjct: 833 CL 834
>gi|323332050|gb|EGA73461.1| Nam7p [Saccharomyces cerevisiae AWRI796]
Length = 930
Score = 189 bits (481), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 136/422 (32%), Positives = 218/422 (51%), Gaps = 43/422 (10%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + S+ ++ R+LVCAPSN A+D + +L + G+ K+VR
Sbjct: 432 PGTGKTVTSATIVYHLSKIHKDRILVCAPSNVAVDHLAAKLRDLGL----------KVVR 481
Query: 413 IGLKAHH----SVNSVAIDHLVEQ----------KRDDSAADKQKHGATR--KDRDSIRS 456
+ K+ SV+++A+ +LV + K D + R K +
Sbjct: 482 LTAKSREDVESSVSNLALHNLVGRGAKGELKNLLKLKDEVGELSASDTKRFVKLVRKTEA 541
Query: 457 AILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGD 516
ILN+A +VC T +G +L+ F V+IDE+ QA EP L+P+ G KQV LVGD
Sbjct: 542 EILNKADVVCCTCVGAGD---KRLDTKFRTVLIDESTQASEPECLIPIVKGAKQVILVGD 598
Query: 517 PVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALE 576
QL ++ A G SLF+RL G+ L+ QYRM+P + FPS FY+ +L+
Sbjct: 599 HQQLGPVILERKAADAGLKQSLFERLISLGHVPIRLEVQYRMNPYLSEFPSNMFYEGSLQ 658
Query: 577 DGSDVEDYTTRDWH-EYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLI- 634
+G +E T + + G F + G+E A S++N E + KL
Sbjct: 659 NGVTIEQRTVPNSKFPWPIRGIPMMFWANYGREEISANGTSFLNRIEAMNCERIITKLFR 718
Query: 635 -SMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKV---VDITTVDGCQGREKDV 690
+ P+ Q+ +I+PY Q + + ++ + G + + V++ +VD QGREKD
Sbjct: 719 DGVKPE-----QIGVITPYEGQ-RAYILQYMQMNGSLDKDLYIKVEVASVDAFQGREKDY 772
Query: 691 AIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQD 750
I SCVRA+++++IGFL D RR+NVG+TRAK ++++G +L + WN+L+ ++
Sbjct: 773 IILSCVRANEQQAIGFLRDPRRLNVGLTRAKYGLVILGNPRSLARNTLWNHLLIHFREKG 832
Query: 751 CL 752
CL
Sbjct: 833 CL 834
>gi|323336281|gb|EGA77552.1| Nam7p [Saccharomyces cerevisiae Vin13]
Length = 930
Score = 189 bits (481), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 136/422 (32%), Positives = 218/422 (51%), Gaps = 43/422 (10%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + S+ ++ R+LVCAPSN A+D + +L + G+ K+VR
Sbjct: 432 PGTGKTVTSATIVYHLSKIHKDRILVCAPSNVAVDHLAAKLRDLGL----------KVVR 481
Query: 413 IGLKAHH----SVNSVAIDHLVEQ----------KRDDSAADKQKHGATR--KDRDSIRS 456
+ K+ SV+++A+ +LV + K D + R K +
Sbjct: 482 LTAKSREDVESSVSNLALHNLVGRGAKGELKNLLKLKDEVGELSASDTKRFVKLVRKTEA 541
Query: 457 AILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGD 516
ILN+A +VC T +G +L+ F V+IDE+ QA EP L+P+ G KQV LVGD
Sbjct: 542 EILNKADVVCCTCVGAGD---KRLDTKFRTVLIDESTQASEPECLIPIVKGAKQVILVGD 598
Query: 517 PVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALE 576
QL ++ A G SLF+RL G+ L+ QYRM+P + FPS FY+ +L+
Sbjct: 599 HQQLGPVILERKAADAGLKQSLFERLISLGHVPIRLEVQYRMNPYLSEFPSNMFYEGSLQ 658
Query: 577 DGSDVEDYTTRDWH-EYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLI- 634
+G +E T + + G F + G+E A S++N E + KL
Sbjct: 659 NGVTIEQRTVPNSKFPWPIRGIPMMFWANYGREEISANGTSFLNRIEAMNCERIITKLFR 718
Query: 635 -SMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKV---VDITTVDGCQGREKDV 690
+ P+ Q+ +I+PY Q + + ++ + G + + V++ +VD QGREKD
Sbjct: 719 DGVKPE-----QIGVITPYEGQ-RAYILQYMQMNGSLDKDLYIKVEVASVDAFQGREKDY 772
Query: 691 AIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQD 750
I SCVRA+++++IGFL D RR+NVG+TRAK ++++G +L + WN+L+ ++
Sbjct: 773 IILSCVRANEQQAIGFLRDPRRLNVGLTRAKYGLVILGNPRSLARNTLWNHLLIHFREKG 832
Query: 751 CL 752
CL
Sbjct: 833 CL 834
>gi|417414131|gb|JAA53366.1| Putative dna helicase, partial [Desmodus rotundus]
Length = 2488
Score = 189 bits (481), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 122/347 (35%), Positives = 188/347 (54%), Gaps = 29/347 (8%)
Query: 426 IDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHG-- 483
I H+ +++++ ++ K+ G +K +S I+ E+ I+C TLS SG LL G
Sbjct: 1931 IAHVSKERQELASKIKEVQGRPQK----TQSIIILESHIICCTLSTSGGLLLESAFRGQG 1986
Query: 484 ---FDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFK 540
F VI+DEA QA E TL PL C ++ LVGDP QLP TVIS A+ GY S+
Sbjct: 1987 GVPFSCVIVDEAGQACEVETLTPLIHRCNKLILVGDPKQLPPTVISLKAQEYGYDQSMMA 2046
Query: 541 RLQR-----------AGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDW 589
R + PV L QYRMHP++ FPS Y L+ E T R
Sbjct: 2047 RFCKLLEENVEHNVSGRLPVLQLNVQYRMHPDICLFPSNYVYSRNLKTNRVTE--TIRCS 2104
Query: 590 HEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAII 649
E+ F P+ FD+ +G E + + S++N+ E+ V+ L KL+ + + + II
Sbjct: 2105 SEWP-FQPYLVFDVGDGLERR--DNDSYVNVQEIKVVIELI-KLLKDKRKDVTFRNVGII 2160
Query: 650 SPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASD-KKSIGFLA 708
+ Y+ Q Q+ + F E + + ++ TVD QGR+KD I +CVRA+ + SIGFLA
Sbjct: 2161 THYKAQKMMIQKELDKEF--EGKGLAEVDTVDAFQGRQKDCIIVTCVRANAVQGSIGFLA 2218
Query: 709 DYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRV 755
+R+ V ITRAK S+ ++G TL +++HWN+L++ A+++ + +
Sbjct: 2219 SLQRLTVAITRAKYSLFILGHLRTLMDNQHWNHLIQDAQRRGAIIKT 2265
>gi|327200469|pdb|2XZL|A Chain A, Upf1-Rna Complex
Length = 802
Score = 189 bits (481), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 136/422 (32%), Positives = 218/422 (51%), Gaps = 43/422 (10%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + S+ ++ R+LVCAPSN A+D + +L + G+ K+VR
Sbjct: 384 PGTGKTVTSATIVYHLSKIHKDRILVCAPSNVAVDHLAAKLRDLGL----------KVVR 433
Query: 413 IGLKAHH----SVNSVAIDHLVEQ----------KRDDSAADKQKHGATR--KDRDSIRS 456
+ K+ SV+++A+ +LV + K D + R K +
Sbjct: 434 LTAKSREDVESSVSNLALHNLVGRGAKGELKNLLKLKDEVGELSASDTKRFVKLVRKTEA 493
Query: 457 AILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGD 516
ILN+A +VC T +G +L+ F V+IDE+ QA EP L+P+ G KQV LVGD
Sbjct: 494 EILNKADVVCCTCVGAGD---KRLDTKFRTVLIDESTQASEPECLIPIVKGAKQVILVGD 550
Query: 517 PVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALE 576
QL ++ A G SLF+RL G+ L+ QYRM+P + FPS FY+ +L+
Sbjct: 551 HQQLGPVILERKAADAGLKQSLFERLISLGHVPIRLEVQYRMNPYLSEFPSNMFYEGSLQ 610
Query: 577 DGSDVEDYTTRDWH-EYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLI- 634
+G +E T + + G F + G+E A S++N E + KL
Sbjct: 611 NGVTIEQRTVPNSKFPWPIRGIPMMFWANYGREEISANGTSFLNRIEAMNCERIITKLFR 670
Query: 635 -SMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKV---VDITTVDGCQGREKDV 690
+ P+ Q+ +I+PY Q + + ++ + G + + V++ +VD QGREKD
Sbjct: 671 DGVKPE-----QIGVITPYEGQ-RAYILQYMQMNGSLDKDLYIKVEVASVDAFQGREKDY 724
Query: 691 AIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQD 750
I SCVRA+++++IGFL D RR+NVG+TRAK ++++G +L + WN+L+ ++
Sbjct: 725 IILSCVRANEQQAIGFLRDPRRLNVGLTRAKYGLVILGNPRSLARNTLWNHLLIHFREKG 784
Query: 751 CL 752
CL
Sbjct: 785 CL 786
>gi|256273504|gb|EEU08438.1| Nam7p [Saccharomyces cerevisiae JAY291]
Length = 971
Score = 189 bits (481), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 136/422 (32%), Positives = 218/422 (51%), Gaps = 43/422 (10%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + S+ ++ R+LVCAPSN A+D + +L + G+ K+VR
Sbjct: 432 PGTGKTVTSATIVYHLSKIHKDRILVCAPSNVAVDHLAAKLRDLGL----------KVVR 481
Query: 413 IGLKAHH----SVNSVAIDHLVEQ----------KRDDSAADKQKHGATR--KDRDSIRS 456
+ K+ SV+++A+ +LV + K D + R K +
Sbjct: 482 LTAKSREDVESSVSNLALHNLVGRGAKGELKNLLKLKDEVGELSASDTKRFVKLVRKTEA 541
Query: 457 AILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGD 516
ILN+A +VC T +G +L+ F V+IDE+ QA EP L+P+ G KQV LVGD
Sbjct: 542 EILNKADVVCCTCVGAGD---KRLDTKFRTVLIDESTQASEPECLIPIVKGAKQVILVGD 598
Query: 517 PVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALE 576
QL ++ A G SLF+RL G+ L+ QYRM+P + FPS FY+ +L+
Sbjct: 599 HQQLGPVILERKAADAGLKQSLFERLISLGHVPIRLEVQYRMNPYLSEFPSNMFYEGSLQ 658
Query: 577 DGSDVEDYTTRDWH-EYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLI- 634
+G +E T + + G F + G+E A S++N E + KL
Sbjct: 659 NGVTIEQRTVPNSKFPWPIRGIPMMFWANYGREEISANGTSFLNRIEAMNCERIITKLFR 718
Query: 635 -SMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKV---VDITTVDGCQGREKDV 690
+ P+ Q+ +I+PY Q + + ++ + G + + V++ +VD QGREKD
Sbjct: 719 DGVKPE-----QIGVITPYEGQ-RAYILQYMQMNGSLDKDLYIKVEVASVDAFQGREKDY 772
Query: 691 AIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQD 750
I SCVRA+++++IGFL D RR+NVG+TRAK ++++G +L + WN+L+ ++
Sbjct: 773 IILSCVRANEQQAIGFLRDPRRLNVGLTRAKYGLVILGNPRSLARNTLWNHLLIHFREKG 832
Query: 751 CL 752
CL
Sbjct: 833 CL 834
>gi|224138824|ref|XP_002326699.1| predicted protein [Populus trichocarpa]
gi|222834021|gb|EEE72498.1| predicted protein [Populus trichocarpa]
Length = 1256
Score = 189 bits (480), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 129/407 (31%), Positives = 207/407 (50%), Gaps = 51/407 (12%)
Query: 376 VLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHL------ 429
VLVCAPSN A+D++ ++ TG+ K+VR+ K+ +V+S ++HL
Sbjct: 517 VLVCAPSNVAVDQLAEKISATGL----------KVVRLCAKSREAVSS-PVEHLTLHYQV 565
Query: 430 -------------VEQKRDD----SAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFS 472
++Q +D+ S++D++K+ A ++ + I A ++C T +
Sbjct: 566 RHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKR---ATEREISQSADVICCTCVGA 622
Query: 473 GSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHL 532
G L+ N F V+IDE+ QA EP L+PL G KQV VGD QL ++ A
Sbjct: 623 GDPRLA--NFRFRQVLIDESTQATEPECLIPLVLGAKQVVFVGDHCQLGPVIMCKKAARA 680
Query: 533 GYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR--DWH 590
G SLF+RL G L+ QYRMHP + FPS FY+ L++G V + + D+
Sbjct: 681 GLAQSLFERLVLLGVKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTVNERQSSGIDFP 740
Query: 591 EYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQ---LKSSSQLA 647
P FF + G+E A S++N E V K+++ + + + S + +
Sbjct: 741 WPVPNRPM-FFYVQMGQEEISASGTSYLNRTEAANV----EKIVTTFLRSGVVPSQACIG 795
Query: 648 IISPYRHQVKQFQERFKETFGVESQ--KVVDITTVDGCQGREKDVAIFSCVRASDKKSIG 705
+I+PY Q + Q K +++ +VD QGREKD I SCVR+++ + IG
Sbjct: 796 VITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIG 855
Query: 706 FLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
FL D RR+NV +TRA+ I+++G L + WN+L+ ++ +CL
Sbjct: 856 FLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNSLLTHYKEHECL 902
>gi|6323726|ref|NP_013797.1| ATP-dependent RNA helicase NAM7 [Saccharomyces cerevisiae S288c]
gi|400350|sp|P30771.1|NAM7_YEAST RecName: Full=ATP-dependent helicase NAM7; AltName:
Full=Nonsense-mediated mRNA decay protein 1; AltName:
Full=Nuclear accommodation of mitochondria 7 protein;
AltName: Full=Up-frameshift suppressor 1
gi|4023|emb|CAA44266.1| helicase [Saccharomyces cerevisiae]
gi|173142|gb|AAA35197.1| zinc finger protein [Saccharomyces cerevisiae]
gi|807962|emb|CAA89226.1| Nam7p [Saccharomyces cerevisiae]
gi|207342353|gb|EDZ70140.1| YMR080Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|259148654|emb|CAY81899.1| Nam7p [Saccharomyces cerevisiae EC1118]
gi|285814083|tpg|DAA09978.1| TPA: ATP-dependent RNA helicase NAM7 [Saccharomyces cerevisiae
S288c]
gi|323353063|gb|EGA85363.1| Nam7p [Saccharomyces cerevisiae VL3]
gi|392297240|gb|EIW08340.1| Nam7p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 971
Score = 189 bits (480), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 136/422 (32%), Positives = 218/422 (51%), Gaps = 43/422 (10%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + S+ ++ R+LVCAPSN A+D + +L + G+ K+VR
Sbjct: 432 PGTGKTVTSATIVYHLSKIHKDRILVCAPSNVAVDHLAAKLRDLGL----------KVVR 481
Query: 413 IGLKAHH----SVNSVAIDHLVEQ----------KRDDSAADKQKHGATR--KDRDSIRS 456
+ K+ SV+++A+ +LV + K D + R K +
Sbjct: 482 LTAKSREDVESSVSNLALHNLVGRGAKGELKNLLKLKDEVGELSASDTKRFVKLVRKTEA 541
Query: 457 AILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGD 516
ILN+A +VC T +G +L+ F V+IDE+ QA EP L+P+ G KQV LVGD
Sbjct: 542 EILNKADVVCCTCVGAGD---KRLDTKFRTVLIDESTQASEPECLIPIVKGAKQVILVGD 598
Query: 517 PVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALE 576
QL ++ A G SLF+RL G+ L+ QYRM+P + FPS FY+ +L+
Sbjct: 599 HQQLGPVILERKAADAGLKQSLFERLISLGHVPIRLEVQYRMNPYLSEFPSNMFYEGSLQ 658
Query: 577 DGSDVEDYTTRDWH-EYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLI- 634
+G +E T + + G F + G+E A S++N E + KL
Sbjct: 659 NGVTIEQRTVPNSKFPWPIRGIPMMFWANYGREEISANGTSFLNRIEAMNCERIITKLFR 718
Query: 635 -SMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKV---VDITTVDGCQGREKDV 690
+ P+ Q+ +I+PY Q + + ++ + G + + V++ +VD QGREKD
Sbjct: 719 DGVKPE-----QIGVITPYEGQ-RAYILQYMQMNGSLDKDLYIKVEVASVDAFQGREKDY 772
Query: 691 AIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQD 750
I SCVRA+++++IGFL D RR+NVG+TRAK ++++G +L + WN+L+ ++
Sbjct: 773 IILSCVRANEQQAIGFLRDPRRLNVGLTRAKYGLVILGNPRSLARNTLWNHLLIHFREKG 832
Query: 751 CL 752
CL
Sbjct: 833 CL 834
>gi|71417104|ref|XP_810474.1| regulator of nonsense transcripts 1 [Trypanosoma cruzi strain CL
Brener]
gi|70875009|gb|EAN88623.1| regulator of nonsense transcripts 1, putative [Trypanosoma cruzi]
Length = 839
Score = 189 bits (480), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 134/401 (33%), Positives = 197/401 (49%), Gaps = 35/401 (8%)
Query: 365 VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENI----RSYTPKIVR-IGLKAH- 418
V+ + R R ++LVCAPSN A+D++ R+ G++ + R P V+ +GL +
Sbjct: 418 VLEVNLRIRSQILVCAPSNVAVDQLAERISAAGLKTVRLHAHYRELVPSSVKHLGLDSQV 477
Query: 419 -----HSVNSVAIDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSG 473
S + + L+E K D+Q+ I A+L A ++C T +
Sbjct: 478 EEFIASSSGNRRLRQLLELKLAGEVLDEQEQKIYNDSVRDIEEALLGGADVICCTCIGAA 537
Query: 474 SALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLG 533
L K+ F V+IDEA Q EP TLVPL G KQVFLVGD QL V S AE G
Sbjct: 538 DRRLGKMR--FQYVLIDEATQGTEPETLVPLVRGAKQVFLVGDHCQLRPLVFSLPAERAG 595
Query: 534 YGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYR 593
SLF+RL G+ L QYRMHP + FPS +FY+ L++G E RD R
Sbjct: 596 LRRSLFERLLMTGHRAVRLDVQYRMHPALSLFPSDQFYEGTLQNGLTEEQ---RD--ASR 650
Query: 594 CFG------PFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLI---SMYPQLKSSS 644
F P F++ G E A S++N E + KLI + P
Sbjct: 651 VFPWPDPTRPIFFYNT-TGSEELSANGSSYLNRAEAALTERIITKLIRDGKVKPD----- 704
Query: 645 QLAIISPYRHQVKQFQERFKETFGV--ESQKVVDITTVDGCQGREKDVAIFSCVRASDKK 702
+ +I+PY Q + + + + V++++VD QGREK+ I SCVR++ ++
Sbjct: 705 DIGVITPYGGQCRYVMNYLVRCGPLPRTAYERVEVSSVDAFQGREKEFIILSCVRSNHRQ 764
Query: 703 SIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLV 743
IGF+ D+RR+NV ITRAK ++++G L W+ L+
Sbjct: 765 GIGFVVDWRRLNVSITRAKRGLIIMGNVQLLSRYPAWHALL 805
>gi|190408311|gb|EDV11576.1| helicase [Saccharomyces cerevisiae RM11-1a]
Length = 971
Score = 189 bits (480), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 136/422 (32%), Positives = 218/422 (51%), Gaps = 43/422 (10%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + S+ ++ R+LVCAPSN A+D + +L + G+ K+VR
Sbjct: 432 PGTGKTVTSATIVYHLSKIHKDRILVCAPSNVAVDHLAAKLRDLGL----------KVVR 481
Query: 413 IGLKAHH----SVNSVAIDHLVEQ----------KRDDSAADKQKHGATR--KDRDSIRS 456
+ K+ SV+++A+ +LV + K D + R K +
Sbjct: 482 LTAKSREDVESSVSNLALHNLVGRGAKGELKNLLKLKDEVGELSASDTKRFVKLVRKTEA 541
Query: 457 AILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGD 516
ILN+A +VC T +G +L+ F V+IDE+ QA EP L+P+ G KQV LVGD
Sbjct: 542 EILNKADVVCCTCVGAGD---KRLDTKFRTVLIDESTQASEPECLIPIVKGAKQVILVGD 598
Query: 517 PVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALE 576
QL ++ A G SLF+RL G+ L+ QYRM+P + FPS FY+ +L+
Sbjct: 599 HQQLGPVILERKAADAGLKQSLFERLISLGHVPIRLEVQYRMNPYLSEFPSNMFYEGSLQ 658
Query: 577 DGSDVEDYTTRDWH-EYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLI- 634
+G +E T + + G F + G+E A S++N E + KL
Sbjct: 659 NGVTIEQRTVPNSKFPWPIRGIPMMFWANYGREEISANGTSFLNRIEAMNCERIITKLFR 718
Query: 635 -SMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKV---VDITTVDGCQGREKDV 690
+ P+ Q+ +I+PY Q + + ++ + G + + V++ +VD QGREKD
Sbjct: 719 DGVKPE-----QIGVITPYEGQ-RAYILQYMQMNGSLDKDLYIKVEVASVDAFQGREKDY 772
Query: 691 AIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQD 750
I SCVRA+++++IGFL D RR+NVG+TRAK ++++G +L + WN+L+ ++
Sbjct: 773 IILSCVRANEQQAIGFLRDPRRLNVGLTRAKYGLVILGNPRSLARNTLWNHLLIHFREKG 832
Query: 751 CL 752
CL
Sbjct: 833 CL 834
>gi|303391232|ref|XP_003073846.1| putative DNA helicase [Encephalitozoon intestinalis ATCC 50506]
gi|303302994|gb|ADM12486.1| putative DNA helicase [Encephalitozoon intestinalis ATCC 50506]
Length = 779
Score = 189 bits (480), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 128/399 (32%), Positives = 204/399 (51%), Gaps = 32/399 (8%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG L V N + Y +VLV APSN+A+D++ L++ TG+R + S +
Sbjct: 362 PGTGKTLVSSAIVYNLVKHYGGKVLVVAPSNTAVDQLTLKIHKTGLRVLRVMSRRREC-- 419
Query: 413 IGLKAHHSVNSVAI-DHLVE-----QKRDDSAADKQKHGATRKD--RDSIRSAILNEAVI 464
VN +++ ++L E +K+D+ D ++ + D +S++ +LN+A +
Sbjct: 420 ----GQSDVNFLSLHENLKELQEGRKKKDECYGDHNRYNSIYNDETNESLKKHLLNQAEV 475
Query: 465 VCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATV 524
+ T SG + +K F V+IDEA Q+ EP +L+PL GCK++ LVGD QL T+
Sbjct: 476 ITCTCVTSGQKMFNKFR--FHYVLIDEAVQSTEPLSLIPLVYGCKKLVLVGDHKQLGPTI 533
Query: 525 ISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDY 584
+ G+ SLF+RL G +L QYRM ++ +PS FY+ L G
Sbjct: 534 LCKKVAQAGFKQSLFERLISIGVVPYVLSVQYRMDADLCEWPSEMFYNGELLTGG----- 588
Query: 585 TTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSS 644
+++ + P +FF + G+E S++N E + L + + +
Sbjct: 589 --KNFCRFDLGIPTNFFYVCYGREEVSPSGTSFVNQAEALHCESIIRHL---FKCGVTEN 643
Query: 645 QLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSI 704
Q+ +I+PY Q R FG E ++I+ VDG QGREKD I S VR++ + I
Sbjct: 644 QIGVITPYEGQRSYILNRI---FGAEPGN-LEISNVDGFQGREKDFIIVSLVRSNLYQGI 699
Query: 705 GFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLV 743
GF+ D RRMNV +TRAK ++++G TL W+NL+
Sbjct: 700 GFVGDKRRMNVMLTRAKHGLVIIGNPMTLMRHDMWSNLL 738
>gi|66805537|ref|XP_636490.1| hypothetical protein DDB_G0288923 [Dictyostelium discoideum AX4]
gi|74852418|sp|Q54I89.1|RENT1_DICDI RecName: Full=Regulator of nonsense transcripts 1; AltName:
Full=Up-frameshift suppressor 1 homolog
gi|60464869|gb|EAL62985.1| hypothetical protein DDB_G0288923 [Dictyostelium discoideum AX4]
Length = 1331
Score = 189 bits (480), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 131/405 (32%), Positives = 204/405 (50%), Gaps = 48/405 (11%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQK- 433
+VLVC PSN A+D++ +L G+ K+VR+ K V S ++HL K
Sbjct: 584 KVLVCTPSNVAIDQLTGKLHEIGL----------KVVRLSSKLREEVAS-PVEHLTLHKQ 632
Query: 434 --RDDSAADKQKHGATRKDRDSIRS------------------AILNEAVIVCSTLSFSG 473
+ D D + G RK +++ S AIL +A ++C+T +G
Sbjct: 633 VYKLDQMGDGEL-GKLRKLKEAFGSLSNEDEKRYIYLRRMMEMAILRKADVICATCVGAG 691
Query: 474 SALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLG 533
LS+ F ++IDE+ QA EP L+PL G KQV LVGD QL ++ G
Sbjct: 692 DPRLSQFR--FPHILIDESTQASEPECLIPLMMGAKQVILVGDHRQLGPVLLCKKVVDAG 749
Query: 534 YGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALED---GSDVEDYTTRDWH 590
SLF+RL G+ + L QYRMHP + FPS Y+ L +D + + W
Sbjct: 750 LSQSLFERLISLGHHPERLTIQYRMHPSLTEFPSNTSYEGQLVSELSHTDRDSQSKFPWP 809
Query: 591 EYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKS-SSQLAII 649
+ + P FF+ +E +G+ S+IN E K+++ + +L S Q+ II
Sbjct: 810 QPK--DPMFFFNCTGSEEISSSGT-SFINTTEASIC----EKIVTKFLELGSLPGQIGII 862
Query: 650 SPYRHQVKQFQERFKET--FGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFL 707
+PY Q +++ +E K +++ +VD QGREKD I SCVR++D + IGFL
Sbjct: 863 TPYEGQRAYITSHMQKSGKLNLELYKSIEVASVDSFQGREKDYIILSCVRSNDYQGIGFL 922
Query: 708 ADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
D RR+NV +TRA+ ++++G A L +D WN+L+ + ++ L
Sbjct: 923 QDPRRLNVALTRARFGLIILGNAKVLSKDPLWNSLISHFKNKNVL 967
>gi|426193612|gb|EKV43545.1| hypothetical protein AGABI2DRAFT_210326 [Agaricus bisporus var.
bisporus H97]
Length = 927
Score = 189 bits (480), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 172/566 (30%), Positives = 256/566 (45%), Gaps = 104/566 (18%)
Query: 258 NASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLREIKRGP 317
N SQ++A+ ++ K L+QGPPGTGKT+TI+ +
Sbjct: 380 NKSQIKAMAT-MIGKRISLVQGPPGTGKTKTIVETIKL---------------------- 416
Query: 318 ELPMHEKYNHWGRASPWLVGANPR---DNIMPIDGDDGFFPTTGNELKPEVVNSSRRYRV 374
L +H + +H P LV DN++ +GF LKP V R R
Sbjct: 417 -LKLHFEVSH-----PILVCTYTNVAVDNLL-----EGFAKAG---LKPLRVGFGSRIRA 462
Query: 375 RVLVCAPSNSALDEIVLR------LLNT----GIRDENIRSYTPKIVRIGLKAHHSVNSV 424
+ +LD ++L+ LL T +E I I K S
Sbjct: 463 SL-----QEYSLDHLLLKHPLQPLLLETIALLDKMEEEIGQLGALIRDTLKKIEGKTPSA 517
Query: 425 AIDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAV----IVCSTLSFSGSALLSKL 480
A++ V ++ R + ++ +L++ V +VCST S S+ L+
Sbjct: 518 AMEQRVRNMSQAMGMKDRRRNELRAKKYGLQQEMLHDIVKSADVVCSTCITSASSALNVA 577
Query: 481 NHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFK 540
+ F VV +DEA+ + EPATL+P+ G + + L+GD QLP ++S A G SLF+
Sbjct: 578 D--FPVVFVDEASMSTEPATLIPIMKGSRHLALIGDHKQLPPVIVSQEARAQGLAVSLFE 635
Query: 541 RLQRAG-YPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFS 599
RL G P ML QYRMHP + FPS EFY+ +++DG+ +D E P S
Sbjct: 636 RLTEEGIVPSVMLDIQYRMHPRISHFPSLEFYNSSIQDGTTDKDGNVVVGLE----PPMS 691
Query: 600 FFDI-----HEGK-ESQPA------------GSGSWINIDEVDFVLLLFHKLISMYPQLK 641
+ HEG+ S+P+ S +N E V+ L L+ PQL+
Sbjct: 692 LTHLLQDGNHEGQSRSRPSVIFLDHFGYETMSGRSRVNHHEAQIVVSLVEDLLLQNPQLR 751
Query: 642 SSSQLAIISPYRHQVKQFQ----------ERFKETFGVESQKV---VDITTVDGCQGREK 688
+ II+PY Q+ ERF+E G + + V++ TVDG +GREK
Sbjct: 752 GQD-IGIIAPYVAQINLLNRLLTTDVRNGERFREVLGNQRYRDMSDVEVKTVDGFEGREK 810
Query: 689 DVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCAST----LREDKHWNNLVK 744
+V +FS VR +D IGFLAD RR+NVG+TRAK + VVG T +RE ++ +
Sbjct: 811 EVIVFSTVRNNDSGRIGFLADRRRLNVGLTRAKRGLFVVGGMRTIGGPIREAEYGVTVAG 870
Query: 745 SAEKQDCLFRVS--KPYASFFSDENL 768
K+ R K YA++ + E L
Sbjct: 871 VGVKKRGGKRADSWKRYAAWLAKEGL 896
>gi|409074520|gb|EKM74916.1| hypothetical protein AGABI1DRAFT_123471 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 937
Score = 189 bits (480), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 163/525 (31%), Positives = 240/525 (45%), Gaps = 98/525 (18%)
Query: 258 NASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLREIKRGP 317
N SQ++A+ ++ K L+QGPPGTGKT+TI+ +
Sbjct: 390 NKSQIKAMAT-MIGKRISLVQGPPGTGKTKTIVETIKL---------------------- 426
Query: 318 ELPMHEKYNHWGRASPWLVGANPR---DNIMPIDGDDGFFPTTGNELKPEVVNSSRRYRV 374
L +H + +H P LV DN++ +GF LKP V R R
Sbjct: 427 -LKLHFEVSH-----PILVCTYTNVAVDNLL-----EGFAKAG---LKPLRVGFGSRIRA 472
Query: 375 RVLVCAPSNSALDEIVLR------LLNT----GIRDENIRSYTPKIVRIGLKAHHSVNSV 424
+ +LD ++L+ LL T +E I I K S
Sbjct: 473 SL-----QEYSLDHLLLKHPLQPLLLETIALLDKMEEEISQLGALIRDTLKKIEGKTPSA 527
Query: 425 AIDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAV----IVCSTLSFSGSALLSKL 480
A++ V ++ R + ++ +L++ V +VCST S S+ L+
Sbjct: 528 AMEQRVRNMSQAMGMKDRRRNELRAKKYGLQQEMLHDIVKSADVVCSTCITSASSALNVA 587
Query: 481 NHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFK 540
+ F VV +DEA+ + EPATL+P+ G + + L+GD QLP ++S A G SLF+
Sbjct: 588 D--FPVVFVDEASMSTEPATLIPIMKGSRHLALIGDHKQLPPVIVSQEARAQGLAVSLFE 645
Query: 541 RLQRAG-YPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFS 599
RL G P ML QYRMHP + FPS EFY+ +++DG+ +D E P S
Sbjct: 646 RLTEEGIVPSVMLDIQYRMHPRISHFPSLEFYNSSIQDGTTDKDGNVVVGLE----PPMS 701
Query: 600 FFDI-----HEGK-ESQPA------------GSGSWINIDEVDFVLLLFHKLISMYPQLK 641
+ HEG+ S+P+ S +N E V+ L L+ PQL+
Sbjct: 702 LTHLLQDGNHEGQSRSRPSVIFLDHFGYETMSGRSRVNHHEAQIVVSLVEDLLLQNPQLR 761
Query: 642 SSSQLAIISPYRHQVKQFQ----------ERFKETFGVESQKV---VDITTVDGCQGREK 688
+ II+PY Q+ ERF+E G + + V++ TVDG +GREK
Sbjct: 762 GQD-IGIIAPYVAQINLLNRLLTTDVRNGERFREVLGNQRYRDMSDVEVKTVDGFEGREK 820
Query: 689 DVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTL 733
+V +FS VR +D IGFLAD RR+NVG+TRAK + VVG T+
Sbjct: 821 EVIVFSTVRNNDSGRIGFLADRRRLNVGLTRAKRGLFVVGGMRTI 865
>gi|254585189|ref|XP_002498162.1| ZYRO0G03740p [Zygosaccharomyces rouxii]
gi|238941056|emb|CAR29229.1| ZYRO0G03740p [Zygosaccharomyces rouxii]
Length = 944
Score = 189 bits (480), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 139/428 (32%), Positives = 215/428 (50%), Gaps = 55/428 (12%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + S+ ++ R+LVCAPSN A+D + +L G+ K+VR
Sbjct: 429 PGTGKTVTSATIVYHLSKLHKDRILVCAPSNVAVDHLAAKLRMLGL----------KVVR 478
Query: 413 IGLKAHH----SVNSVAIDHLVEQKRDD---------------SAADKQKHGATRKDRDS 453
+ ++ SV+ +A+ +LV + S D +K K +S
Sbjct: 479 LTARSREDVESSVSDLALHNLVSRSAKGELKKLLKLKEEVGELSVKDTKKFVKMVKIAES 538
Query: 454 IRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFL 513
IL +A +VC T +G +L F V+IDE+ QA EP L+P+ G QV L
Sbjct: 539 ---DILKKADVVCCTCVGAGD---RRLGAKFKTVLIDESTQASEPECLIPIVKGAIQVIL 592
Query: 514 VGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDE 573
VGD QL ++ A G SLF+RL G+ L+ QYRM+P + FPS FY+
Sbjct: 593 VGDHQQLGPVILERKAGDAGLKQSLFERLISLGHVPLRLEVQYRMNPHLSEFPSNMFYEG 652
Query: 574 ALEDGSDVEDYT----TRDW--HEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVL 627
+L++G +E T T W HE P F+ + G+E A S++N E
Sbjct: 653 SLQNGVTIEQRTVPNSTFPWPIHEV----PMMFW-ANYGREEISANGTSYLNRIEA---- 703
Query: 628 LLFHKLIS-MYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDI--TTVDGCQ 684
+ ++I+ ++ Q+ +I+PY Q + + +++ V++ +VD Q
Sbjct: 704 MNCERIITRLFKDGVKPEQIGVITPYEGQRAYILQYMQMNGSLDTDLYVNVEVASVDAFQ 763
Query: 685 GREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVK 744
GREKD I SCVRA+D++SIGFL+D RRMNVG+TRAK ++++G L + WNNL+
Sbjct: 764 GREKDYIILSCVRANDQQSIGFLSDSRRMNVGLTRAKYGLVILGNPRALSTNVLWNNLLI 823
Query: 745 SAEKQDCL 752
++ CL
Sbjct: 824 HFREKGCL 831
>gi|328866870|gb|EGG15253.1| hypothetical protein DFA_10087 [Dictyostelium fasciculatum]
Length = 854
Score = 189 bits (480), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 135/451 (29%), Positives = 226/451 (50%), Gaps = 53/451 (11%)
Query: 369 SRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIG--LKAHHSVNSVAI 426
S + V++L + +N+ +D ++ LL G+ ++R+G K + +
Sbjct: 339 SGKSNVKILATSFTNTGVDNLLEGLLKAGVN----------VLRLGDANKVREELRCATL 388
Query: 427 DHLVEQK--RDDSAADKQKHGAT-------RKDRDSIRSAILNEAVIVCSTLSFSGSALL 477
++ +E++ R DS+A + G+ + I+S +++EA ++CST SG +L
Sbjct: 389 EYRMEEELNRWDSSAKRSNQGSKPGSSSYYMQSEREIKSRLISEADVICSTCIGSGHEML 448
Query: 478 SKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTS 537
++ F ++++DEA QA EPA L+PL +Q++L GD QL ++S A G S
Sbjct: 449 --MDEKFQIIVVDEATQATEPAILIPLLKSSEQMYLFGDQNQLAPIILSHKAIEGGLNIS 506
Query: 538 LFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR---DWHEYRC 594
+F RL ++G +L TQYRMH + FP FY+ L +G++ + W +
Sbjct: 507 MFDRLFKSGLTPFLLNTQYRMHSSISDFPRHHFYNGLLNNGTNDSNLKIPIGIKWPQIDF 566
Query: 595 FGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRH 654
P F DI G+E S N +E V+ + L+ L + + II+PY
Sbjct: 567 --PVVFIDISNGREE--IKHHSLYNNEEAVAVVQVAESLLENDESL-FRNNIGIITPYHA 621
Query: 655 QVKQFQERF---KETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYR 711
QVK + F K G + + TVD QGRE DV IFS VR++ K +IGFL D+R
Sbjct: 622 QVKHINQVFSNDKSWRGAQPS----VATVDSYQGREMDVIIFSTVRSNTKGNIGFLKDWR 677
Query: 712 RMNVGITRAKSSILVVGCASTLRE--DKHWNNLVKSAEKQDCLFRVSKPYASFFSDENLE 769
R+NV ITRAK ++V+G T+ D+HW V+ A+ ++ + + +L+
Sbjct: 678 RLNVSITRAKRGLVVIGNFGTINNSSDEHWKAYVQWAKDKNIMVK------------SLD 725
Query: 770 SMRKNATTDNVQGADGHVPHDDETMHYANTG 800
S+ + +T N +G DD T+ + ++G
Sbjct: 726 SIIEKSTA-NKKGKRKARSDDDPTLSFRDSG 755
Score = 46.2 bits (108), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 29/139 (20%)
Query: 168 IHINKDAVKSQRLLNIHSLITSSVSAVEKRLFSLKICSLS-------TIAREYLALRSVG 220
I + + + +R++ ++++S + + +L + L T A EY+ ++
Sbjct: 218 IDLGTNLITMERMMKALTMVSSDKALYQTKLADIIFGHLKPGKTLEDTCATEYIPFQTKE 277
Query: 221 S-LPFKDLILSASEKSSGSQDQSWKIPGLLHEYIKENHNASQLEAIHEGLLRKAFVLIQG 279
S L FKD+ +Y N N SQ +AI + + R+A LIQG
Sbjct: 278 SPLKFKDM--------------------FPMDYKTWNLNPSQKDAIEKSICRRA-SLIQG 316
Query: 280 PPGTGKTQTILGLLSAILH 298
PPGTGK+ T + LL ++H
Sbjct: 317 PPGTGKSTTAIYLLRLLVH 335
>gi|17380277|sp|O76512.1|RENT1_CAEEL RecName: Full=Regulator of nonsense transcripts 1; AltName:
Full=ATP-dependent helicase smg-2; AltName:
Full=Nonsense mRNA reducing factor 1; AltName:
Full=Up-frameshift suppressor 1 homolog
gi|3328177|gb|AAC26789.1| nonsense-mediated mRNA decay trans-acting factor [Caenorhabditis
elegans]
Length = 1069
Score = 189 bits (479), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 140/399 (35%), Positives = 199/399 (49%), Gaps = 38/399 (9%)
Query: 376 VLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAH-HSVNSVAIDHLVEQKR 434
VLVC+PSN A+D + ++ TG+ K+VR+ ++ HS +V L Q +
Sbjct: 492 VLVCSPSNIAVDHLAEKIHKTGL----------KVVRLCARSREHSETTVPYLTLQHQLK 541
Query: 435 DDSAADKQK------HGATRKDRDSIR---------SAILNEAVIVCSTLSFSGSALLSK 479
A+ QK + +D +R +L A ++C T S + A LSK
Sbjct: 542 VMGGAELQKLIQLKDEAGELEFKDDLRYMQLKRVKEHELLAAADVICCTCSSAADARLSK 601
Query: 480 LNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLF 539
+ V+IDE+ QA EP LV + G +Q+ LVGD QL VI A G SLF
Sbjct: 602 IR--TRTVLIDESTQATEPEILVSIMRGVRQLVLVGDHCQLGPVVICKKAAIAGLSQSLF 659
Query: 540 KRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVED--YTTRDWHEYRCFGP 597
+RL G L+ QYRMHP + FPS FYD +L++G D T DWH + P
Sbjct: 660 ERLVLLGIRPFRLQVQYRMHPVLSEFPSNVFYDGSLQNGVTENDRHMTGVDWHWPKPNKP 719
Query: 598 FSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVK 657
+FF G E A S++N E V L KLI Q Q+ +I+ Y Q +
Sbjct: 720 -AFFWHCSGSEELSASGTSFLNRTEAANVEKLVSKLIKAGVQ---PHQIGVITSYEGQ-R 774
Query: 658 QFQERFKETFGVESQKV---VDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMN 714
F + T G + K+ V+I +VD QGREKD I +CVR++D IGFL+D RR+N
Sbjct: 775 SFIVNYMHTQGTLNSKLYENVEIASVDAFQGREKDYIIVTCVRSNDILGIGFLSDPRRLN 834
Query: 715 VGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLF 753
V ITRAK +++VG A L W+ L+ + ++ L+
Sbjct: 835 VAITRAKYGLVLVGNAKVLARHDLWHELINHYKSKEMLY 873
>gi|444316488|ref|XP_004178901.1| hypothetical protein TBLA_0B05540 [Tetrapisispora blattae CBS 6284]
gi|387511941|emb|CCH59382.1| hypothetical protein TBLA_0B05540 [Tetrapisispora blattae CBS 6284]
Length = 1056
Score = 189 bits (479), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 139/428 (32%), Positives = 223/428 (52%), Gaps = 55/428 (12%)
Query: 355 PTTGNELKPEVV--NSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + + + S+ + R+LVCAPSN A+D + +L + G+ K+VR
Sbjct: 503 PGTGKTVTSATIIYHLSKLHSERILVCAPSNVAVDHLATKLRDLGL----------KVVR 552
Query: 413 IGLKAHH----SVNSVAIDHLV---------------EQKRDDSAADKQKH-GATRKDRD 452
+ K+ SV+ +A+ +LV E+ + SA D +K RK
Sbjct: 553 LTAKSREDVESSVSDLALHNLVARSSKGELRKLLRLKEEVGELSANDTKKFVKLVRK--- 609
Query: 453 SIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVF 512
S IL +A +VC T +G +L+ F V+IDE+ QA EP L+P+ G KQV
Sbjct: 610 -TESEILKKADVVCCTCVGAGD---KRLDTKFRTVLIDESTQASEPECLIPIVKGAKQVI 665
Query: 513 LVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYD 572
LVGD QL ++ A G SLF+RL G+ L+ QYRM+P + FPS FY+
Sbjct: 666 LVGDHQQLGPVILERKAGDAGLKQSLFERLISLGHVPIRLEVQYRMNPFLSEFPSNMFYE 725
Query: 573 EALEDGSDVEDYT----TRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLL 628
+L++G ++ T T W + P F+ + G+E A S++N E +
Sbjct: 726 GSLQNGVTLDQRTVPTSTFPWPIHDV--PMMFW-ANYGREEISANGTSYLNRIEA----M 778
Query: 629 LFHKLIS-MYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKV---VDITTVDGCQ 684
++I+ ++ Q+ +I+PY Q + + ++ + G + + V++ +VD Q
Sbjct: 779 NCERVITRLFKDGVKPEQIGVITPYEGQ-RAYILQYMQMNGTLDKDLYINVEVASVDAFQ 837
Query: 685 GREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVK 744
GREKD I SCVRA+++++IGFL+D RRMNVG+TRAK ++V+G +L + WN+L+
Sbjct: 838 GREKDYIILSCVRANEQQAIGFLSDPRRMNVGLTRAKYGLVVLGNPRSLSRNILWNHLLI 897
Query: 745 SAEKQDCL 752
++ CL
Sbjct: 898 HFRQKGCL 905
>gi|118388103|ref|XP_001027152.1| phage head-tail adaptor, putative family protein [Tetrahymena
thermophila]
gi|89308922|gb|EAS06910.1| phage head-tail adaptor, putative family protein [Tetrahymena
thermophila SB210]
Length = 1112
Score = 189 bits (479), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 130/395 (32%), Positives = 194/395 (49%), Gaps = 24/395 (6%)
Query: 373 RVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIG---LKAHHSVNSVAIDH- 428
R +VLVCAPSN +D++ R+ GI+ + S + +++ L H+ V S+ D
Sbjct: 490 RGQVLVCAPSNIVVDQLAERIHQAGIKVVRMCSRSREMISSSVEFLTLHNQVRSLDFDEY 549
Query: 429 -----LVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHG 483
L+E K D D + IL A ++CST S L +
Sbjct: 550 KEMQKLLELKEDQGELDHDDEDKYYSLKRQGEKEILRNAEVICSTCISSADPRLKDIR-- 607
Query: 484 FDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQ 543
F V+IDEA QA+EP L+P+ G K V LVGD QL V G SLF+R+
Sbjct: 608 FKHVLIDEATQAIEPECLLPMLKGAKHVILVGDHRQLGPVVTCRDTAKAGLNKSLFERMV 667
Query: 544 RAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCF----GPFS 599
G L+ QYRMHP++ FPS FY+ L++G D R +H + P
Sbjct: 668 SMGIRPIRLQVQYRMHPDLSIFPSNTFYEGTLQNGVTFND---RQFHGEFPWPNKNKPLM 724
Query: 600 FFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQF 659
F + +E +G+ S++N E + + +LI + Q+ II+PY+ Q
Sbjct: 725 FLNSCGVEEISSSGT-SYLNRQETALIEDIVFRLIKAKVK---PEQIGIITPYKGQRFYI 780
Query: 660 QERFKETFGVES--QKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGI 717
+ + + + ++I +VDG QGREKD I SCVR+++ + IGFL D RR+NV I
Sbjct: 781 GDYLSKNGRLNHVLYRQIEIASVDGFQGREKDYIIISCVRSNECQGIGFLTDPRRLNVAI 840
Query: 718 TRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
TRA+ +++VG A L D WNNL+ ++ L
Sbjct: 841 TRARYGLIIVGNAKVLARDNLWNNLLNHMKENKVL 875
>gi|403337792|gb|EJY68119.1| hypothetical protein OXYTRI_11366 [Oxytricha trifallax]
Length = 1153
Score = 189 bits (479), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 131/404 (32%), Positives = 200/404 (49%), Gaps = 45/404 (11%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVA--------- 425
+VLVCAPSN A+D++ ++ +TGI K+VR+ ++ SV+S
Sbjct: 606 KVLVCAPSNIAVDQLTDKINSTGI----------KVVRMCARSRESVSSNVDYLSLHEQI 655
Query: 426 ----------IDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSA 475
+ L+ +K + + +++ ++ + IL A ++C+T +
Sbjct: 656 KYLSHGPFKLMQELILKKEEQNELTEKEERQLKELKRQAEDEILKNAEVICTTCVAAFDR 715
Query: 476 LLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYG 535
L N F V+IDEA QA EP TL+P+ G K V LVGD QL ++ A G
Sbjct: 716 RLR--NFKFSQVLIDEATQATEPETLIPILRGAKHVILVGDHCQLGPVIMCKKAAKAGLN 773
Query: 536 TSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRD----WHE 591
SLF+RL G L+ QYRMHP + +FPS FY+ +L++G +D D W
Sbjct: 774 QSLFERLVCLGIRPIRLQVQYRMHPVLSAFPSMTFYEGSLQNGISKQDRILSDFKFQWPA 833
Query: 592 YRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISP 651
P F+ +E +G+ S++N E V L + + LK Q+ II+P
Sbjct: 834 SE--KPMMFYHSISNEEISASGT-SFLNRQEAYNVEALVTQFLKF--DLK-PEQIGIITP 887
Query: 652 YRHQVKQFQERFKETFGV---ESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLA 708
Y Q K F + + G K +++ +VD QGREKD + SCVR+++ IGFL
Sbjct: 888 YEGQ-KAFITSYMQRSGQLDPSLYKEIEVASVDSFQGREKDFILLSCVRSNEASGIGFLN 946
Query: 709 DYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
D RR+NV +TRAK +++ G A L + WNNL+ + Q CL
Sbjct: 947 DPRRLNVALTRAKYGLVIFGNAKVLSKHDLWNNLLNEFKNQGCL 990
>gi|430813983|emb|CCJ28727.1| unnamed protein product [Pneumocystis jirovecii]
Length = 1045
Score = 189 bits (479), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 130/404 (32%), Positives = 204/404 (50%), Gaps = 47/404 (11%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNS-VAIDHLVEQK 433
+VLVCAPSN A+D++ ++ TG+ K+VR+ K+ + S VA L EQ
Sbjct: 491 QVLVCAPSNVAVDQLCKKIHQTGL----------KVVRVSAKSREDLESPVASLTLHEQV 540
Query: 434 RDD-------------------SAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGS 474
R++ S+ D++K+ A K IL+ A ++C+T G
Sbjct: 541 RNNDTNTELQKLIQLRDELGELSSQDEKKYKALVK---MCEKEILSNADVICATCVGCGD 597
Query: 475 ALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGY 534
LSK F V+IDEA QA EP ++PL GCKQV LVGD QL +++ A G
Sbjct: 598 PRLSKFK--FRTVLIDEATQATEPECMIPLVMGCKQVVLVGDHQQLGPVIMNKKAAKAGL 655
Query: 535 GTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDW-HEYR 593
SLF+RL G L QYRMHP + FPS FY+ L++G + ++ +
Sbjct: 656 QQSLFERLVVLGISPIRLTVQYRMHPCLSEFPSNMFYEGTLQNGVSKNERLRKNVDFPWP 715
Query: 594 CFGPFSFFDIHEGKESQPAGSGSWINIDE---VDFVLLLFHKLISMYPQLKSSSQLAIIS 650
F + G+E + S++N E + +++ F K + SQ+ II+
Sbjct: 716 VNDTPMMFHMSLGQEEISSSGTSYLNRTEASNCEKIVVKFFKAGVKF------SQIGIIT 769
Query: 651 PYRHQVKQFQERFKETFGVESQ--KVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLA 708
PY Q +++ + K +++ +VD QGREKD I SCVR+++ + IGFL+
Sbjct: 770 PYEGQRSYIVSSMQQSGSLRKDLYKEIEVASVDAFQGREKDYIIVSCVRSNEHQGIGFLS 829
Query: 709 DYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
D RR+NV +TRAK ++++G L + W +L+ ++++CL
Sbjct: 830 DPRRLNVALTRAKYGVVILGNPKVLSKHPLWYHLLLHYKEKNCL 873
>gi|268569138|ref|XP_002640442.1| C. briggsae CBR-SMG-2 protein [Caenorhabditis briggsae]
Length = 1051
Score = 188 bits (478), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 137/399 (34%), Positives = 200/399 (50%), Gaps = 38/399 (9%)
Query: 376 VLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAH-HSVNSVA--------- 425
VLVC+PSN A+D + ++ TG+ K+VR+ ++ HS +V
Sbjct: 487 VLVCSPSNIAVDHLAEKIHKTGL----------KVVRLCARSREHSETTVPHLTLQHQLK 536
Query: 426 ------IDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSK 479
+ L++ K + + + R+ + +L A ++C T S + A LSK
Sbjct: 537 VLGGPELKKLIQLKEEIGELESKDDLRYRQLKRVKEHELLAAADVICCTCSSAADARLSK 596
Query: 480 LNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLF 539
+ V+IDE+ QA EP LV + G +Q+ LVGD QL VI A G SLF
Sbjct: 597 IR--TRTVLIDESTQATEPEILVSIVRGVRQLVLVGDHCQLGPVVICKKAAIAGLSQSLF 654
Query: 540 KRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR--DWHEYRCFGP 597
+RL G L+ QYRMHP + FPS FYD +L++G + + DW P
Sbjct: 655 ERLVLLGIRPFRLQVQYRMHPVLSEFPSNAFYDGSLQNGVTENERQMKGIDWSWPTPSKP 714
Query: 598 FSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVK 657
+FF G E A S++N E V L KLI + + Q+ +I+PY Q +
Sbjct: 715 -AFFWHCSGAEELSASGTSFLNRTEAANVEKLVSKLIKGGVEPR---QIGVITPYEGQ-R 769
Query: 658 QFQERFKETFGVESQKV---VDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMN 714
F + +T G + K+ V+I +VD QGREKD I +CVR++D IGFL+D RR+N
Sbjct: 770 SFIVNYMQTQGTLNSKLYEGVEIASVDAFQGREKDYIIVTCVRSNDILGIGFLSDPRRLN 829
Query: 715 VGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLF 753
V ITRAK I+VVG A L + W L+ +K+D L+
Sbjct: 830 VAITRAKYGIVVVGNAKVLSRHELWYELINHYKKKDMLY 868
>gi|156836785|ref|XP_001642437.1| hypothetical protein Kpol_337p1 [Vanderwaltozyma polyspora DSM
70294]
gi|156112963|gb|EDO14579.1| hypothetical protein Kpol_337p1 [Vanderwaltozyma polyspora DSM
70294]
Length = 999
Score = 188 bits (478), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 139/429 (32%), Positives = 225/429 (52%), Gaps = 57/429 (13%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + S+ ++ R+LVCAPSN A+D + +L + G+ K+VR
Sbjct: 449 PGTGKTVTSATIVYHLSKSHKDRILVCAPSNVAVDHLASKLRDLGL----------KVVR 498
Query: 413 IGLKAHH----SVNSVAIDHLVEQKRDD---------------SAADKQKHGATRKDRDS 453
+ K+ SV+ +A+ +LV + SA D +K R R +
Sbjct: 499 LTAKSREDVESSVSDLALHNLVARSSKGELKKLLKLKEEVGELSATDAKKF--VRLVRKA 556
Query: 454 IRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFL 513
S IL +A +VC T +G +L+ F V+IDE+ QA EP L+P+ G KQ+ L
Sbjct: 557 -ESEILKKADVVCCTCVGAGD---KRLDAKFRTVLIDESTQASEPECLIPIVKGAKQIIL 612
Query: 514 VGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDE 573
VGD QL ++ A G SLF+RL G+ L+ QYRM+P + FPS FY+
Sbjct: 613 VGDHQQLGPVILERKAGDAGLKQSLFERLILLGHVPIRLEVQYRMNPFLSEFPSNMFYEG 672
Query: 574 ALEDGSDVEDYT----TRDW--HEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVL 627
+L++G +E T T W HE P F+ + G+E A S++N E
Sbjct: 673 SLQNGVTIEQRTIPGSTFPWPIHEV----PMMFW-ANYGREEISANGTSFLNRIEA---- 723
Query: 628 LLFHKLIS-MYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKV---VDITTVDGC 683
+ ++I+ ++ Q+ +I+PY Q + + ++ + G +++ V++ +VD
Sbjct: 724 MNCERIITRLFKDGVKPHQIGVITPYEGQ-RAYILQYMQMNGSLDKELYVNVEVASVDAF 782
Query: 684 QGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLV 743
QGREKD I SCVRA+++++IGFL+D RR+NVG+TRAK ++++G +L + WN+L+
Sbjct: 783 QGREKDYIILSCVRANEQQAIGFLSDPRRLNVGLTRAKYGLVILGNPRSLSRNVLWNHLL 842
Query: 744 KSAEKQDCL 752
++ CL
Sbjct: 843 IHFREKGCL 851
>gi|403412933|emb|CCL99633.1| predicted protein [Fibroporia radiculosa]
Length = 1074
Score = 188 bits (478), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 129/404 (31%), Positives = 208/404 (51%), Gaps = 47/404 (11%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNS----------- 423
+VLVCAPSN A+D++ ++ TG+ K+VR+ K+ +++S
Sbjct: 486 QVLVCAPSNVAVDQLTEKIHATGL----------KVVRLTAKSREALDSSVSFLTLHQQV 535
Query: 424 ------VAIDHLVEQKRDD---SAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGS 474
V + L++ K + S+ D++K+ A + IL+ A ++C T +G
Sbjct: 536 ANYTTHVELQKLIQLKNEQGELSSNDERKYKALIRQ---CEKEILSAADVICCTCVGAGD 592
Query: 475 ALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGY 534
LSKL F V+IDEA QA EP ++PL GCKQV LVGD QL +++ A G
Sbjct: 593 PRLSKLK--FRTVLIDEATQAAEPECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAARAGL 650
Query: 535 GTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDW-HEYR 593
SLF+RL G L+ QYRMHP + FPS FY+ L++G + ++ +
Sbjct: 651 TQSLFERLVVLGNRPIRLQVQYRMHPCLSEFPSNMFYEGTLQNGVTAPERLRKNVDFPWP 710
Query: 594 CFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSS---SQLAIIS 650
FF + G+E + S++N E V K+++ + KS SQ+ +++
Sbjct: 711 VPDTPMFFYQNLGQEEISSSGTSFLNRTEASNV----EKIVTKF--FKSGVVPSQIGVVT 764
Query: 651 PYRHQVKQFQE--RFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLA 708
PY Q +F + + K +++ +VD QGREKD I SCVR+++ + IGFL
Sbjct: 765 PYEGQRSYIVNYMQFNGSLKKDLYKEIEVASVDAFQGREKDYIILSCVRSNEHQGIGFLN 824
Query: 709 DYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
D RR+NV +TRAK ++++G L + W+ L+ ++++CL
Sbjct: 825 DPRRLNVALTRAKYGVVILGNPKVLSKHPLWHYLLTHYKEKNCL 868
>gi|149237651|ref|XP_001524702.1| ATP-dependent helicase NAM7 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146451299|gb|EDK45555.1| ATP-dependent helicase NAM7 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 977
Score = 188 bits (478), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 139/429 (32%), Positives = 211/429 (49%), Gaps = 54/429 (12%)
Query: 355 PTTGNELKPEVV--NSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + + + SR + ++LVCAPSN A+D + +L G+ K+VR
Sbjct: 432 PGTGKTVTSATIIYHLSRSNKEKILVCAPSNVAVDHLAAKLDTLGL----------KVVR 481
Query: 413 IGLKAHHSVNSVAIDHLV-----------EQKRDDSAADKQKHGATRKDRDSIRS----- 456
+ K+ V S ++ HL E K+ ++ + + IR+
Sbjct: 482 LTAKSREDVES-SVGHLALHNIVSKTAKGELKKLLKLKNEVGELSMEDSKSFIRNLRTSE 540
Query: 457 -AILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVG 515
IL++A +VC T + L++ F V+IDE+ QA EP L+P+ G KQV LVG
Sbjct: 541 LKILSKADVVCCTCVGAADKRLAQFK--FRTVLIDESTQASEPEVLIPIVKGAKQVILVG 598
Query: 516 DPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEAL 575
D QL ++ A G SLF+RL G+ L+ QYRMHP + FPS FY+ +L
Sbjct: 599 DHQQLGPVILDRKAADAGLKQSLFERLVFLGHVPIRLEVQYRMHPCLSEFPSNMFYEGSL 658
Query: 576 EDGSDVEDYTTRDWHEYRCFGPFSFFDI------HEGKESQPAGSGSWINIDEVDFVLLL 629
++G T++D P+ D + G+E S++N E V +
Sbjct: 659 QNG-----VTSKDRLVEEAMFPWPVLDTPMMFWANYGREELSGSGNSYLNRVEAMNVERI 713
Query: 630 FHKLI--SMYPQLKSSSQLAIISPYRHQ---VKQFQERFKETFGVESQKV-VDITTVDGC 683
+L + P+ Q+ +I+PY Q + QF Q + V+IT+VD
Sbjct: 714 ITRLFKDGIKPE-----QIGVITPYEGQRAYLVQFMSINSTILDKRDQYLEVEITSVDAF 768
Query: 684 QGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLV 743
QGREKD I SCVRA+D +SIGFL+D RR+NV +TRAK +L++G L +K WN+L+
Sbjct: 769 QGREKDFIILSCVRANDSQSIGFLSDPRRLNVALTRAKYGLLILGNPRALCRNKLWNHLL 828
Query: 744 KSAEKQDCL 752
++ CL
Sbjct: 829 IHFREKGCL 837
>gi|365759093|gb|EHN00906.1| Nam7p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 1033
Score = 188 bits (478), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 135/422 (31%), Positives = 217/422 (51%), Gaps = 43/422 (10%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + S+ ++ R+LVCAPSN A+D + +L + G+ K+VR
Sbjct: 494 PGTGKTVTSATIVYHLSKIHKDRILVCAPSNVAVDHLAAKLRDLGL----------KVVR 543
Query: 413 IGLKAHH----SVNSVAIDHLVEQ----------KRDDSAADKQKHGATR--KDRDSIRS 456
+ K+ SV+++A+ +LV + K D + R K +
Sbjct: 544 LTAKSREDVESSVSNLALHNLVGRGAKGELKNLLKLKDEVGELSASDTKRFVKLVRKTEA 603
Query: 457 AILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGD 516
ILN+A +VC T +G +L+ F V+IDE+ QA EP L+P+ G KQ LVGD
Sbjct: 604 EILNKADVVCCTCVGAGD---KRLDTKFRTVLIDESTQASEPECLIPIVKGAKQAILVGD 660
Query: 517 PVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALE 576
QL ++ A G SLF+RL G+ L+ QYRM+P + FPS FY+ +L+
Sbjct: 661 HQQLGPVILERKAADAGLKQSLFERLISLGHVPIRLEVQYRMNPYLSEFPSNMFYEGSLQ 720
Query: 577 DGSDVEDYTTRDWH-EYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLI- 634
+G +E T + + G F + G+E A S++N E + KL
Sbjct: 721 NGVTIEQRTVPNSKFPWPIRGIPMMFWANYGREEISANGTSFLNRIEAMNCERIITKLFR 780
Query: 635 -SMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKV---VDITTVDGCQGREKDV 690
+ P+ Q+ +I+PY Q + + ++ + G + + V++ +VD QGREKD
Sbjct: 781 DGVKPE-----QIGVITPYEGQ-RAYILQYMQMNGSLDKDLYINVEVASVDAFQGREKDY 834
Query: 691 AIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQD 750
I SCVRA+++++IGFL D RR+NVG+TRAK ++++G +L + WN+L+ ++
Sbjct: 835 IILSCVRANEQQAIGFLRDPRRLNVGLTRAKYGLVILGNPRSLARNTLWNHLLIHFREKG 894
Query: 751 CL 752
CL
Sbjct: 895 CL 896
>gi|328768162|gb|EGF78209.1| hypothetical protein BATDEDRAFT_35814 [Batrachochytrium
dendrobatidis JAM81]
Length = 1119
Score = 188 bits (478), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 135/405 (33%), Positives = 205/405 (50%), Gaps = 49/405 (12%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSV-NSVAIDHLVEQK 433
+VLVCAPSN A+D + ++ TG+ K+VR+ K+ ++ +SV+ L EQ
Sbjct: 528 QVLVCAPSNVAVDHLTSKIHKTGL----------KVVRVTAKSREALESSVSFLSLSEQV 577
Query: 434 RD-DSAADKQKHGATRKDRDSIRSA---------------ILNEAVIVCSTLSFSGSALL 477
++ D+ QK + + + S IL A ++C+T +G + L
Sbjct: 578 KNLDTDRQLQKLIRLKNELGELSSQDEKKYKYLFRKAEREILEHADVICTTCMGAGDSRL 637
Query: 478 SKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTS 537
SK + F V++DEA QA EP L+PL G KQV LVGD QL V A G S
Sbjct: 638 SKFS--FRSVLVDEATQACEPECLIPLVLGSKQVVLVGDHQQLGPVVQHKKASKAGLSQS 695
Query: 538 LFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRD----W--HE 591
LF+RL G L+ QYRMHP + FPS FY+ +L++G V++ + W HE
Sbjct: 696 LFERLIILGLRPIRLQVQYRMHPCLSEFPSNMFYEGSLQNGVTVQERIRPEIDFPWPVHE 755
Query: 592 YRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISP 651
P F+ G+E A S++N E +V + K + + +Q+ I++P
Sbjct: 756 ----TPMIFYGSF-GQEEIAASGKSYLNRTEAAYVEKVVTKFLKAG---VTPAQIGIVTP 807
Query: 652 YRHQ----VKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFL 707
Y Q V+ Q F + E K +++ +VD QGREKD I +CVR+++ + IGFL
Sbjct: 808 YEGQRAYVVQHMQ--FNGSLKKELYKEIEVASVDSFQGREKDYIIVTCVRSNENQGIGFL 865
Query: 708 ADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
D RR+NV +TRAK +++VG L + W L+ + + CL
Sbjct: 866 VDPRRLNVALTRAKYGLVIVGNPKVLAKHPLWYQLLMTFREHSCL 910
>gi|406864055|gb|EKD17101.1| RNA helicase [Marssonina brunnea f. sp. 'multigermtubi' MB_m1]
Length = 1098
Score = 188 bits (478), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 146/484 (30%), Positives = 229/484 (47%), Gaps = 73/484 (15%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSV-NSVAIDHLVEQK 433
+VLVCAPSN A+D++ R+ TG+ K+VR+ K+ V +SV L EQ
Sbjct: 497 QVLVCAPSNVAVDQLCERIHRTGL----------KVVRLTAKSREDVQSSVGFLSLHEQV 546
Query: 434 R-DDSAADKQKHGATRKDRDSIRSA---------------ILNEAVIVCSTLSFSGSALL 477
R +DS + K + + + S IL A ++C T +G L
Sbjct: 547 RMNDSNLELTKLSQLKSELGELSSQDEKKFKTLTRGAEREILTNADVICCTCVGAGDPRL 606
Query: 478 SKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTS 537
+K+ F V+IDE+ Q+ EP ++PL GCKQV LVGD QL +++ A G S
Sbjct: 607 AKMK--FRTVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQS 664
Query: 538 LFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGP 597
LF+RL + G L QYRMHP + FPS FY+ +L++G + RC
Sbjct: 665 LFERLVQLGQNPIRLDVQYRMHPCLSEFPSNMFYEGSLQNGVTMV-------QRIRCDVD 717
Query: 598 FSF--------FDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAII 649
F + F + G E A S++N E V + + Q + + +I
Sbjct: 718 FPWPVSDTPMMFWSNLGNEEISASGTSYLNRTEASNVEKIVTRFFKAGVQ---PADIGVI 774
Query: 650 SPYRHQVKQFQERFKE--TFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFL 707
+PY Q + TF E+ K +++ +VD QGREKD + SCVR++D + IGFL
Sbjct: 775 TPYEGQRSYVVSSMQNTGTFKKENYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGFL 834
Query: 708 ADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDC------------LFRV 755
+D RR+NV +TRAK ++++G L + W++L+ +++DC L +
Sbjct: 835 SDPRRLNVALTRAKYGLVILGNPKVLSKHPLWHHLLLHFKERDCLVEGPLSNLQTSLLQF 894
Query: 756 SKPYASFFSDENLE----SMRKNATTDNVQGAD--------GHVPHDDETMHYANTGDAD 803
S+P +++ + + S + T+ D G+VP D ++H + G A
Sbjct: 895 SRPKSTYRGPQRYQMSHASFNGRSGTNGKAPRDFSDAGSMMGYVPDDVSSVHSSALGGAG 954
Query: 804 QGQA 807
G A
Sbjct: 955 LGSA 958
>gi|50551471|ref|XP_503209.1| YALI0D23881p [Yarrowia lipolytica]
gi|49649077|emb|CAG81409.1| YALI0D23881p [Yarrowia lipolytica CLIB122]
Length = 964
Score = 188 bits (478), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 130/406 (32%), Positives = 203/406 (50%), Gaps = 50/406 (12%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQK- 433
++LVCAPSN A+D++ R+ +TGI ++R+ ++ S++S +++HL Q
Sbjct: 467 KILVCAPSNVAVDQLAERIASTGI----------DVLRLTARSRESMSS-SVEHLTIQHA 515
Query: 434 -----------------RDD----SAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFS 472
+D+ SAAD+++ K AI+ +A ++C T S +
Sbjct: 516 LRHGDHGFTRLQKLFELKDELGEFSAADEKEFAKLEKKASE---AIIRKAEVICCTCSTA 572
Query: 473 GSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHL 532
G+ L L F V+IDE QA EP L+PL GCKQV VGD QL +++ A +
Sbjct: 573 GNFKLQNLT--FSAVLIDEVTQASEPECLIPLVHGCKQVVFVGDHQQLGPVILNSKAANA 630
Query: 533 GYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDG----SDVEDYTTRD 588
G SLF+RL G+ L QYRMHP + FPS FY+ +L++G S V Y
Sbjct: 631 GLNKSLFERLILIGHVPIRLMVQYRMHPSLSEFPSNMFYEGSLQNGVTTASRVLKYVDFP 690
Query: 589 WHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAI 648
W + + P F+ + G+E A S++N E + +L + Q+ +
Sbjct: 691 WPQPQ--HPMLFWS-NLGQEEISASGTSFLNRTEAANCERIVTRLFKCG---VAPDQIGV 744
Query: 649 ISPYRHQVKQFQERFKETFGVESQ--KVVDITTVDGCQGREKDVAIFSCVRASDKKSIGF 706
++PY Q + + V+ K V++ +VD QGREKD I +CVR+S IGF
Sbjct: 745 VTPYEGQRAYVTQYMVSSGSVDEAMYKGVEVQSVDAFQGREKDFIILTCVRSSKTGGIGF 804
Query: 707 LADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
L+D RR+NV +TRAK ++++G L W +L+ + CL
Sbjct: 805 LSDPRRLNVALTRAKYGLIILGNPHVLARHPLWLHLITYFRSKRCL 850
>gi|357621770|gb|EHJ73491.1| putative nonsense-mediated mrna decay protein 1 [Danaus plexippus]
Length = 1037
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 134/396 (33%), Positives = 212/396 (53%), Gaps = 50/396 (12%)
Query: 376 VLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSV-NSVAIDHLVEQKR 434
VLVCAPSN+A+D++ ++ TG+ K+VR+ K+ ++ +SV+ L EQ R
Sbjct: 497 VLVCAPSNTAVDQLTEKIHRTGL----------KVVRLCAKSREAMESSVSFLALHEQAR 546
Query: 435 DDSAADKQKHGATRKDRDS-----------------IRSAILNEAVIVCSTLSFSGSALL 477
+AD + TR ++ +L+ A +VC+T +G +
Sbjct: 547 ALGSADSELRKLTRLKEEAGELSAADERRYRALRRAAERRLLDAADVVCTTCVGAGDPRV 606
Query: 478 SKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTS 537
+++ F ++IDE Q+ EP +VP+ G +Q+ LVGD QL V+ A G S
Sbjct: 607 ARMR--FQSILIDEGMQSTEPECMVPVVLGARQLILVGDHCQLGPVVMCKKAAKAGLSQS 664
Query: 538 LFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR--DWHEYRCF 595
LF+RL G L+ QYRMHPE+ FPS FY+ +L++G E+ D+ R
Sbjct: 665 LFERLVVLGIRPFRLEVQYRMHPELSRFPSDFFYEGSLQNGVSAEERRLHKIDFPWPRPD 724
Query: 596 GPFSFFDIHEGKESQPAGSG-SWINIDEVDFVLLLFHKLISMYPQLKSS---SQLAIISP 651
P FF + +G+E + AGSG S++N E V KL + + LK+ Q+ II+P
Sbjct: 725 RPM-FFYVTQGQE-EIAGSGTSYLNRTEAANV----EKLTTRF--LKAGVRPEQIGIITP 776
Query: 652 YRHQ----VKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFL 707
Y Q V+ Q ++ + + + +++ +VD QGREKD+ I SCVR+++ + IGFL
Sbjct: 777 YEGQRSYLVQHMQ--YQGSLHAKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFL 834
Query: 708 ADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLV 743
+D RR+NV +TRAK ++VVG L + WN+L+
Sbjct: 835 SDPRRLNVALTRAKYGLIVVGNPKVLSKQPLWNHLL 870
>gi|298707435|emb|CBJ30064.1| RNA helicase [Ectocarpus siliculosus]
Length = 1101
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 133/428 (31%), Positives = 214/428 (50%), Gaps = 49/428 (11%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + +R+ +VLVCAPSN A+D + ++ TG+R +VR
Sbjct: 527 PGTGKTVTSATLVYHLARQGMGQVLVCAPSNVAVDHLTAKISATGLR----------VVR 576
Query: 413 IGLKAHHSVNSVAIDHL-------------------VEQKRDD----SAADKQKHGATRK 449
+ K+ +V S +DHL ++ +D+ AAD+++ R+
Sbjct: 577 LCAKSREAV-STDVDHLSLHVMVRALDTPDKQDLRKLQLLKDELGELVAADEKRF---RR 632
Query: 450 DRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCK 509
R S IL A ++C+T +G LS +N F V+IDEA QA+E L+P+ G K
Sbjct: 633 LRSSAEREILQAADVICTTCVGAGDPRLSNVNLRFRQVLIDEATQAMEAECLIPIVMGAK 692
Query: 510 QVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSRE 569
Q+ LVGD QL V+ + G SLF+RL G L+ QYRMHP + +PS
Sbjct: 693 QLVLVGDHCQLGPVVLCKKSSKAGLTQSLFERLVLLGIRPVRLQVQYRMHPCLSEWPSNM 752
Query: 570 FYDEALEDGSDVEDYTTRDWHEYRCFGPFS--FFDIHEGKESQPAGSGSWINIDEVDFVL 627
FY+ L++G E D ++ P FF + G E + S++N E V
Sbjct: 753 FYEGTLQNGV-TEGERVMDQVDFPWPVPSKPMFFLMTTGVEEISSSGTSYLNRTEATAV- 810
Query: 628 LLFHKLISMYPQLK-SSSQLAIISPYRHQVKQFQERFKETFGVESQ--KVVDITTVDGCQ 684
K ++ + Q + Q+ +++PY Q + + T + S +++ +VD Q
Sbjct: 811 ---EKCVTRFLQKGVTPDQIGVVTPYEGQRSYLVDHLQRTGSLRSSLYSEIEVASVDSFQ 867
Query: 685 GREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVK 744
GREKD+ + +CVR+++ + IGFL+D RR+NV +TRA+ +++G L ++ WN LV
Sbjct: 868 GREKDLILLTCVRSNEHQGIGFLSDPRRLNVALTRARFGCIIIGNPRILAKNPLWNALVN 927
Query: 745 SAEKQDCL 752
+ +CL
Sbjct: 928 FYKDHECL 935
>gi|357491687|ref|XP_003616131.1| Regulator of nonsense transcripts-like protein [Medicago
truncatula]
gi|355517466|gb|AES99089.1| Regulator of nonsense transcripts-like protein [Medicago
truncatula]
Length = 950
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 109/305 (35%), Positives = 172/305 (56%), Gaps = 6/305 (1%)
Query: 451 RDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLAT-GCK 509
R I L+ A ++ T+S S + H ++IDEAAQ E +++PL G +
Sbjct: 571 RGHIEKFCLSNACLILCTVSSSIKLYTEGMAH-VKFLVIDEAAQLKECESMIPLQLPGLQ 629
Query: 510 QVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSRE 569
L+GD QLPA V S +A++ G+G S+F+RL GY ML QYRMHP + FP +E
Sbjct: 630 HGILIGDEKQLPALVKSKIADNCGFGRSMFERLVMLGYKKHMLNVQYRMHPAISMFPCKE 689
Query: 570 FYDEALEDGSDVEDYT-TRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLL 628
FYDE + D V+D + + + E + +SF +I +GKE G S N+ EV +
Sbjct: 690 FYDEQISDAPVVKDASYKKSFLEGEMYASYSFINIAKGKEKSGRGH-SLKNMVEVAVISE 748
Query: 629 LFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGV-ESQKVVDITTVDGCQGRE 687
+ + L + + + + IISPY QV + QE+ K+ V ++ V + ++DG QG E
Sbjct: 749 MINNLKKEFKRTQKKVSIGIISPYNAQVYEIQEKVKQYTSVSDTDFSVSVRSIDGFQGGE 808
Query: 688 KDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTL-REDKHWNNLVKSA 746
+D+ I S VR++ ++GFL++ +R NV +TRA+ + ++G ASTL D W L+ A
Sbjct: 809 EDIIIISTVRSNGSGNVGFLSNRQRANVAMTRARYCLWILGNASTLANSDSIWRKLIVDA 868
Query: 747 EKQDC 751
+++DC
Sbjct: 869 KRRDC 873
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 68/324 (20%), Positives = 133/324 (41%), Gaps = 72/324 (22%)
Query: 10 DEASIFRFCKIILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFE 69
DE + F I+ W ++ ++ RN ++++ +T+ DY +F
Sbjct: 15 DEDAALGFLDIVFSWSIKDVLNQNIYRNK------------VKKIPETFNSPTDYKNSFI 62
Query: 70 PLLFEEVKAQIIQK-------------KDEEEVQEWKLRLVMECGEADGFHLPSVTYEAD 116
P L EE + + K E E +E+KL + F+ S+ +
Sbjct: 63 PPLLEETHSDLYSNLLGVSHAPFCEVLKVERESKEFKLPKSL-------FYQISLKSITN 115
Query: 117 EVES------ISPNDLLLLSKEEFKEGSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHI 170
EVE+ P DL+ + K + T ++ A ++ + ++GE++ +
Sbjct: 116 EVENGVRKYEPEPGDLIAFTDHRPKRVNDLKTQRCPYII----AYVIAPKDDISGEILIL 171
Query: 171 NKDAVKSQRLLNIHSLITSSVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLI-- 228
+ + H+ K+++++ + +++T R + L S D+I
Sbjct: 172 SSKCIFESDYRKDHT----------KKMYAVYLMNMTTNVRIWKGLNSQTEGEHLDIIKK 221
Query: 229 -----LSASEKS----SGSQDQSWKIP-GLLHEYIKENHNASQLEAIHE--GLLRKAFV- 275
L++ E SGS +++ I ++H +N N SQ +A+ G++
Sbjct: 222 VLRPCLNSGESCKLCLSGSNSEAFLIKEDIIHS---QNLNESQEDAVSSCVGMINCCHAN 278
Query: 276 --LIQGPPGTGKTQTILGLLSAIL 297
LI GPPGTGKT+T+ LL ++
Sbjct: 279 IKLIWGPPGTGKTKTVACLLFSLF 302
>gi|403215170|emb|CCK69670.1| hypothetical protein KNAG_0C05720 [Kazachstania naganishii CBS
8797]
Length = 1000
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 134/423 (31%), Positives = 217/423 (51%), Gaps = 45/423 (10%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + ++ ++ R+LVCAPSN A+D + +L + G+ K+VR
Sbjct: 461 PGTGKTVTSATIVYHLAKIHKDRILVCAPSNVAVDHLASKLRDLGL----------KVVR 510
Query: 413 IGLKAHH----SVNSVAIDHLVEQKRD----------DSAADKQKHGATRKDRDSIRSA- 457
+ K+ SV+ +A+ +LV + D + G TR+ ++ A
Sbjct: 511 LTAKSREDVESSVSDLALHNLVAKSSQGELKKLLKLKDEVGELSAVG-TRRFVKLVKKAE 569
Query: 458 --ILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVG 515
IL +A +VC T +G +L+ F V+IDE+ QA EP L+P+ G KQV LVG
Sbjct: 570 LEILAKADVVCCTCVGAGD---KRLDTRFRTVLIDESTQATEPECLIPIVKGAKQVILVG 626
Query: 516 DPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEAL 575
D QL ++ A G SLF+RL G+ L+ QYRM+P + FPS FY+ L
Sbjct: 627 DHQQLGPVILERKAADAGLKQSLFERLISLGHVPIRLEVQYRMNPHLSEFPSNMFYEGTL 686
Query: 576 EDGSDVEDYTTRD-WHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLI 634
++G +E T + + G F + G+E S++N E + KL
Sbjct: 687 QNGVTIEQRTVLNSTFPWPIHGVPMMFWANYGREEISGNGTSYLNRIEAMNCERIITKLF 746
Query: 635 --SMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKV---VDITTVDGCQGREKD 689
+ P+ Q+ +I+PY Q + + ++ + G + + V++ +VD QGREKD
Sbjct: 747 RDGVKPE-----QIGVITPYEGQ-RAYVLQYMQMNGAMDKSLYLKVEVASVDAFQGREKD 800
Query: 690 VAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQ 749
I SCVRA+++++IGFL D RR+NVG+TRAK ++++G +L + WN+L+ ++
Sbjct: 801 YIILSCVRANEQQAIGFLRDPRRLNVGLTRAKYGLVILGNPRSLSRNLLWNHLLVHFREK 860
Query: 750 DCL 752
CL
Sbjct: 861 GCL 863
>gi|401402591|ref|XP_003881287.1| putative regulator of nonsense transcripts UPF1 [Neospora caninum
Liverpool]
gi|325115699|emb|CBZ51254.1| putative regulator of nonsense transcripts UPF1 [Neospora caninum
Liverpool]
Length = 1428
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 168/510 (32%), Positives = 233/510 (45%), Gaps = 107/510 (20%)
Query: 258 NASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLREIKRGP 317
N SQ+ AI L + LIQGPPGTGKT T L+ ++
Sbjct: 610 NPSQMLAIRYAL-QHPLSLIQGPPGTGKTLTSSTLVYQMVK------------------- 649
Query: 318 ELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNSSRRYRVRVL 377
+ E +H +PR G GF G +VL
Sbjct: 650 ---LSEMGSH----------VHPR-------GTGGFNKDGG----------------QVL 673
Query: 378 VCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLV------- 430
V APSN A+D++ R+ TG++ IR Y+ R G A S+ S ++HL
Sbjct: 674 VVAPSNVAVDQLAERINRTGLK--VIRMYSKS--REG--AASSLTSFCMEHLALHKKVLE 727
Query: 431 ----------------EQKRDDSAADKQKHGATRKDRDSIRSA---ILNEAVIVCSTLSF 471
EQ + +AAD+ R+ R I A IL A ++C+T
Sbjct: 728 LKTAGSDEMAKYLQLKEQTGELAAADE------RRLRLLISRAEMEILQTADVICTTCVG 781
Query: 472 SGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEH 531
+G L F V+IDEAAQA EP L+P+ G KQV L+GD QL V+S A
Sbjct: 782 AGDNRLQGFR--FRQVVIDEAAQATEPECLIPIVLGAKQVVLIGDHCQLGPVVLSKKAAA 839
Query: 532 LGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVED--YTTRDW 589
G TSLF RL G+ LK QYRMHP + FPS FY+ L++G + + Y R
Sbjct: 840 AGLATSLFSRLLALGHRPLRLKVQYRMHPALSFFPSYFFYEGELQNGVTMTERTYFHRGP 899
Query: 590 HEYRCFGPF---SFFDIHEGKESQPAGSG-SWINIDEVDFVLLLFHKLISMYPQLKSSSQ 645
E+R P F H + +GSG S++N E + + L+ LK +SQ
Sbjct: 900 GEHRFPWPSEERPMFFYHSTASEEISGSGTSYVNRVEASNIEKIVTFLLKC--GLK-ASQ 956
Query: 646 LAIISPYRHQVKQFQERFKE--TFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKS 703
+ +I+PY Q F+ T G + +++ +VD QGREKD + SCVR++
Sbjct: 957 IGVITPYDGQRAHISSLFQRQTTLGQAAFADLEVASVDAFQGREKDFILLSCVRSNSNTG 1016
Query: 704 IGFLADYRRMNVGITRAKSSILVVGCASTL 733
IGFLAD RR+NV +TRAK +++ G AS L
Sbjct: 1017 IGFLADSRRLNVAMTRAKYGLIICGNASVL 1046
>gi|146411955|ref|XP_001481949.1| hypothetical protein PGUG_05712 [Meyerozyma guilliermondii ATCC
6260]
Length = 949
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 132/408 (32%), Positives = 206/408 (50%), Gaps = 55/408 (13%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLK----AHHSVNSVAIDHLV 430
++LVCAPSN A+D + ++ N G+ K++R+ K A V+ +++ +L+
Sbjct: 449 KILVCAPSNVAVDHLAEKIANLGV----------KVMRLTAKSREDAESLVSHLSLHNLI 498
Query: 431 EQ--KRDDSAADKQK-------------HGATRKDRDSIRSAILNEAVIVCSTLSFSGSA 475
Q KR DK+ H TRK S+ + + ++CST +G
Sbjct: 499 VQTNKRLQKLQDKKNAEGELLAKEAVEFHKLTRKAEKSV----MEDCEVICSTCVGAGDH 554
Query: 476 LLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYG 535
L + F V+IDE+ QA EP ++P+ G KQV LVGD QL ++ A G
Sbjct: 555 RLDSM--VFRAVLIDESTQASEPEIMIPIVKGAKQVILVGDHQQLGPVILHKKAGDAGLK 612
Query: 536 TSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCF 595
SLF+RL G+ L+ QYRMHP + FPS FY+ +L++G E T ++ F
Sbjct: 613 QSLFERLVVLGHVPIRLEVQYRMHPCLSEFPSNMFYEGSLQNGVSSESRTFKN----ETF 668
Query: 596 GPFSFFDI------HEGKESQPAGSGSWINIDEVDFVLLLFHKLIS-MYPQLKSSSQLAI 648
P+ D + G+E A S++N E V K+I+ ++ Q + Q+ +
Sbjct: 669 -PWPVLDFPMMFWANYGREEISASGYSYLNRVEAMNV----EKIITRLFKQGVKAEQIGV 723
Query: 649 ISPYRHQVKQFQERFKETFGV----ESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSI 704
++PY Q + T + E V++ +VD QGREKD I SCVRA++ I
Sbjct: 724 VTPYEGQRAYILQHMLLTGSLVDKREQYSEVEVASVDAFQGREKDYIILSCVRANETHGI 783
Query: 705 GFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
GFL+D RR+NV +TRAK +++VG L ++K WN+L+ ++ CL
Sbjct: 784 GFLSDSRRLNVALTRAKYGLVIVGNPRCLSKNKLWNHLLIHFREKGCL 831
>gi|431898937|gb|ELK07307.1| Putative helicase senataxin [Pteropus alecto]
Length = 1923
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 116/319 (36%), Positives = 170/319 (53%), Gaps = 27/319 (8%)
Query: 455 RSAILNEAVIVCSTLSFSGSALLSKLNHG-----FDVVIIDEAAQAVEPATLVPLATGCK 509
+S ++ E+ I+C TLS SG LL G F VI+DEA Q+ E TL PL C
Sbjct: 1389 QSNVILESHIICCTLSTSGGLLLESAFRGQGGVPFSCVIVDEAGQSCEVETLTPLIHRCN 1448
Query: 510 QVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQR-----------AGYPVKMLKTQYRM 558
++ LVGDP QLP TVIS A+ GY S+ R + PV L QYRM
Sbjct: 1449 KLILVGDPKQLPPTVISMKAQEYGYEQSMMARFYKLLEENVEHNVVGRLPVLQLTVQYRM 1508
Query: 559 HPEVRSFPSREFYDEALEDGSDVEDY-TTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSW 617
HP++ FPS Y +L+ E + DW F P+ FD+ +G E + + S+
Sbjct: 1509 HPDICLFPSNYIYSRSLKTNRLTETIRCSSDW----LFQPYLVFDVGDGAERR--DNDSY 1562
Query: 618 INIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDI 677
+N+ E+ V+ + + + S + II+ Y+ Q Q+ + F + VD
Sbjct: 1563 VNVQEIKLVMEIIKLIKDKKKDV-SFRNIGIITHYKAQKMMIQKELDKEFDGKGPAEVD- 1620
Query: 678 TTVDGCQGREKDVAIFSCVRASDKK-SIGFLADYRRMNVGITRAKSSILVVGCASTLRED 736
TVD QGR+KD I +CVRA+ + SIGFLA +R+NV ITRAK S+ ++G TL E+
Sbjct: 1621 -TVDAFQGRQKDCVIVTCVRANAMQGSIGFLASLQRLNVTITRAKYSLFILGHLRTLMEN 1679
Query: 737 KHWNNLVKSAEKQDCLFRV 755
+HWN+L++ A+K+ + +
Sbjct: 1680 QHWNHLIQDAQKRGAIIKT 1698
>gi|358341434|dbj|GAA49117.1| regulator of nonsense transcripts 1 [Clonorchis sinensis]
Length = 1183
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 131/425 (30%), Positives = 214/425 (50%), Gaps = 48/425 (11%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + ++ ++ +VLV APSN+A+D++ ++ TG+ K+VR
Sbjct: 332 PGTGKTVTSASIVYHLNKIHQKKVLVVAPSNTAVDQLCEKISRTGL----------KVVR 381
Query: 413 IGLKAHHSVNSVAIDHLV-----------------EQKRDD----SAADKQKHGATRKDR 451
+ ++ ++ S + HL+ +Q +D+ S AD++++ +++
Sbjct: 382 LCARSREALAS-PVSHLMLHVQAQHVKGHSELRKLQQLKDETGELSQADEKRYRLLKRE- 439
Query: 452 DSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQV 511
+ +L A +VC T +G L +L+ F V+IDE+ QA EP L+PL GC+QV
Sbjct: 440 --LERELLVAADVVCCTCVTAGDQRLERLS--FHSVLIDESTQATEPECLIPLMVGCRQV 495
Query: 512 FLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFY 571
LVGD QL + A + G SLF+R G L+ QYRMHP + +FPS FY
Sbjct: 496 VLVGDHCQLGPVITCKKAANAGLTQSLFERFVLLGIRPMRLQVQYRMHPALSAFPSNVFY 555
Query: 572 DEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFH 631
+ +L++G ED + + FF G+E S++N E V +
Sbjct: 556 EGSLQNGVTAEDRCKQIDFPWPNPDRPMFFYCTSGQEEISGNGVSYLNRTEAATVEKIVT 615
Query: 632 KL--ISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQ--KVVDITTVDGCQGRE 687
K+ I ++P + + +I+PY Q + + S+ + ++I +VD QGRE
Sbjct: 616 KMLKIGVHP-----NTIGVITPYEGQRAYLAHYLHYSGSLNSKLYQEIEIASVDAFQGRE 670
Query: 688 KDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAE 747
KD I SCVRA++ + IGFL D RR+NV +TRA+ ++VVG L + WN L+
Sbjct: 671 KDYIILSCVRANENQGIGFLNDPRRLNVALTRARYGLIVVGNPKALCKQPLWNQLLHFYR 730
Query: 748 KQDCL 752
+Q L
Sbjct: 731 EQHLL 735
>gi|323307726|gb|EGA60989.1| Nam7p [Saccharomyces cerevisiae FostersO]
Length = 971
Score = 187 bits (476), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 135/422 (31%), Positives = 217/422 (51%), Gaps = 43/422 (10%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + S+ ++ R+LVC PSN A+D + +L + G+ K+VR
Sbjct: 432 PGTGKTVTSATIVYHLSKIHKDRILVCXPSNVAVDHLAAKLRDLGL----------KVVR 481
Query: 413 IGLKAHH----SVNSVAIDHLVEQ----------KRDDSAADKQKHGATR--KDRDSIRS 456
+ K+ SV+++A+ +LV + K D + R K +
Sbjct: 482 LTAKSREDVESSVSNLALHNLVGRGAKGELKNLLKLKDEVGELSASDTKRFVKLVRKTEA 541
Query: 457 AILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGD 516
ILN+A +VC T +G +L+ F V+IDE+ QA EP L+P+ G KQV LVGD
Sbjct: 542 EILNKADVVCCTCVGAGD---KRLDTKFRTVLIDESTQASEPECLIPIVKGAKQVILVGD 598
Query: 517 PVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALE 576
QL ++ A G SLF+RL G+ L+ QYRM+P + FPS FY+ +L+
Sbjct: 599 HQQLGPVILERKAADAGLKQSLFERLISLGHVPIRLEVQYRMNPYLSEFPSNMFYEGSLQ 658
Query: 577 DGSDVEDYTTRDWH-EYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLI- 634
+G +E T + + G F + G+E A S++N E + KL
Sbjct: 659 NGVTIEQRTVPNSKFPWPIRGIPMMFWANYGREEISANGTSFLNRIEAMNCERIITKLFR 718
Query: 635 -SMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKV---VDITTVDGCQGREKDV 690
+ P+ Q+ +I+PY Q + + ++ + G + + V++ +VD QGREKD
Sbjct: 719 DGVKPE-----QIGVITPYEGQ-RAYILQYMQMNGSLDKDLYIKVEVASVDAFQGREKDY 772
Query: 691 AIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQD 750
I SCVRA+++++IGFL D RR+NVG+TRAK ++++G +L + WN+L+ ++
Sbjct: 773 IILSCVRANEQQAIGFLRDPRRLNVGLTRAKYGLVILGNPRSLARNTLWNHLLIHFREKG 832
Query: 751 CL 752
CL
Sbjct: 833 CL 834
>gi|312373027|gb|EFR20858.1| hypothetical protein AND_18385 [Anopheles darlingi]
Length = 1161
Score = 187 bits (476), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 126/387 (32%), Positives = 212/387 (54%), Gaps = 34/387 (8%)
Query: 376 VLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIG---LKAHHSVNSVA------- 425
+LVCAPSN+A+D++ ++ T ++ + + + + + L H+ + ++A
Sbjct: 504 ILVCAPSNTAVDQLTEKIHRTNLKVVRVCARSREAIDSPVSYLALHNQIRNMAQNTELKK 563
Query: 426 IDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFD 485
+ L ++ + S +D++++ + +K + +L A ++C T +G L +L F+
Sbjct: 564 LQQLKDETGELSLSDERRYRSLKKQAER---ELLEAADVICCTCVGAGDLRLQRLK--FN 618
Query: 486 VVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRA 545
++IDE+ Q+ EP +VP+ G KQ+ LVGD QL V+ A G SLF+RL
Sbjct: 619 SILIDESMQSTEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVAL 678
Query: 546 GYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR---DWHEYRCFGPFSFFD 602
G L+ QYRMHPE+ FPS FY+ +L++G ++ + W C P FF
Sbjct: 679 GIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCADERKLKVDFPWPSPDC--PM-FFL 735
Query: 603 IHEGKESQPAGSG-SWINIDEVDFVLLLFHKLISMYPQLKSS---SQLAIISPYRHQVKQ 658
+ +G+E + AGSG S++N E V K+ + + LK+ Q+ II+PY Q
Sbjct: 736 VTQGQE-EIAGSGTSYLNRTEASNV----EKITTRF--LKAGIKPEQIGIITPYEGQRAY 788
Query: 659 FQERFKETFGVESQ--KVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVG 716
+ + + S+ + ++I +VD QGREKD+ I SCVRA++ + IGFL D RR+NV
Sbjct: 789 LVQYMQYQGSLHSKLYQEIEIASVDAFQGREKDIIIMSCVRANEHQGIGFLNDPRRLNVA 848
Query: 717 ITRAKSSILVVGCASTLREDKHWNNLV 743
+TRAK I++VG L + + WN+L+
Sbjct: 849 LTRAKYGIIIVGNPKVLSKQELWNHLL 875
>gi|393245688|gb|EJD53198.1| ATP dependent helicase [Auricularia delicata TFB-10046 SS5]
Length = 1072
Score = 187 bits (476), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 129/405 (31%), Positives = 210/405 (51%), Gaps = 49/405 (12%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNS----------- 423
+VLVCAPSN A+D++ ++ TG+ K+VR+ K+ +++S
Sbjct: 482 QVLVCAPSNVAVDQLTEKIHATGL----------KVVRLTAKSREALDSSISFLTLHQQV 531
Query: 424 ------VAIDHLVEQKRDD---SAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGS 474
V + L++ K + S+ D++K+ A + + IL A ++C+T +G
Sbjct: 532 ANSTSHVELQKLIQLKNEQGELSSNDERKYKALVR---TCEKEILAAADVICTTCVGAGD 588
Query: 475 ALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGY 534
LSK F V+IDEA QA EP ++PL GCKQ LVGD QL +++ A G
Sbjct: 589 LRLSKFK--FRTVLIDEATQAAEPECMIPLVLGCKQAVLVGDHQQLGPVIMNKKAARAGL 646
Query: 535 GTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRC 594
SLF+RL G L+ QYRMHP + FPS FY+ L++G + ++ ++
Sbjct: 647 TQSLFERLVLIGNRPIRLQVQYRMHPCLSEFPSNMFYEGTLQNGVTAPERLRKNV-DFPW 705
Query: 595 FGPFS--FFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSS---SQLAII 649
P + FF + G+E + S++N E V K+++ + KS SQ+ +I
Sbjct: 706 PAPDTPMFFYQNLGQEEISSSGTSFLNRTEAANV----EKIVTKF--FKSGVVPSQIGVI 759
Query: 650 SPYRHQVKQFQE--RFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFL 707
+PY Q +F + + K +++ +VD QGREKD I SCVR+++ + IGFL
Sbjct: 760 TPYEGQRSYIVNYMQFNGSLKKDLYKEIEVASVDAFQGREKDYIILSCVRSNEHQGIGFL 819
Query: 708 ADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
D RR+NV +TRAK ++++G L + W+ L+ ++++CL
Sbjct: 820 NDPRRLNVALTRAKYGVVILGNPKVLSKHPLWHYLLTHYKEKNCL 864
>gi|395333828|gb|EJF66205.1| ATP dependent helicase [Dichomitus squalens LYAD-421 SS1]
Length = 1060
Score = 187 bits (476), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 129/403 (32%), Positives = 206/403 (51%), Gaps = 46/403 (11%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNS----------- 423
+VLVCAPSN A+D++ ++ TG+ K+VR+ K+ +++S
Sbjct: 473 QVLVCAPSNVAVDQLTEKIHATGL----------KVVRLSAKSREALDSSVSFLTLHQQV 522
Query: 424 ------VAIDHLVEQKRDD---SAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGS 474
V + L++ K + S+ D++K+ A + IL A ++C T +G
Sbjct: 523 ANNTTHVELQKLIQLKNEQGELSSNDERKYKALIRQ---CEKEILGAADVICCTCVGAGD 579
Query: 475 ALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGY 534
LSKL F V+IDEA QA EP ++PL GCKQV LVGD QL +++ A G
Sbjct: 580 PRLSKLK--FRTVLIDEATQAAEPECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAARAGL 637
Query: 535 GTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDW-HEYR 593
SLF+RL G L+ QYRMHP + FPS FY+ L++G + ++ +
Sbjct: 638 TQSLFERLVVLGNRPIRLQVQYRMHPCLSEFPSNMFYEGTLQNGVTAPERLRKNVDFPWP 697
Query: 594 CFGPFSFFDIHEGKESQPAGSGSWIN--IDEVDFVLLLFHKLISMYPQLKSSSQLAIISP 651
FF + G+E + S++N V+ ++ F K + P SQ+ +I+P
Sbjct: 698 VPDTPMFFYQNLGQEEISSSGTSFLNRRASNVEKIVTKFFK-SGVVP-----SQIGVITP 751
Query: 652 YRHQVKQFQE--RFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLAD 709
Y Q +F + + K +++ +VD QGREKD I SCVR+++ + IGFL D
Sbjct: 752 YEGQRSYIVNYMQFNGSLKKDLYKEIEVASVDAFQGREKDYIILSCVRSNEHQGIGFLND 811
Query: 710 YRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
RR+NV +TRAK ++++G L + W+ L+ ++++CL
Sbjct: 812 PRRLNVALTRAKYGVVILGNPKVLSKHPLWHYLLTHYKEKNCL 854
>gi|340504626|gb|EGR31053.1| upf1 regulator of nonsense transcripts, putative [Ichthyophthirius
multifiliis]
Length = 928
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 141/452 (31%), Positives = 211/452 (46%), Gaps = 45/452 (9%)
Query: 373 RVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIG---LKAHHSVNSVA---- 425
R ++LVCAPSN +D++ R+ G++ + S + ++V L H+ V S+
Sbjct: 368 RGQILVCAPSNIVVDQLAERMHYAGLKVVRMCSKSREMVSSSVEFLTLHNQVRSLGHGEY 427
Query: 426 --IDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHG 483
+ L+ D D Q + IL A ++CST S L +
Sbjct: 428 EEMQKLLTLMEDQGELDHQDEDVYYSLKRQGEKEILQNAEVICSTCISSADPRLKEFR-- 485
Query: 484 FDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQ 543
F V+IDEA QA+EP L+PL G K LVGD QL V + G SLF+RL
Sbjct: 486 FKHVLIDEATQAIEPECLLPLLKGAKHAILVGDHRQLGPVVTCRDTANAGLNKSLFERLV 545
Query: 544 RAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCF----GPFS 599
G L+ QYRMHP++ FPS FY+ L +G D R +H + P
Sbjct: 546 SMGVRPTRLQVQYRMHPDLSIFPSNTFYEGTLLNGVTFND---RQFHGDFPWPNKNKPLM 602
Query: 600 FFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQF 659
F + +E +G+ S++N E + + +KLI + Q+ II+PY+ Q
Sbjct: 603 FLNSCGVEEISSSGT-SYLNRQETMLIEEIVYKLIKGKVR---PDQIGIITPYKGQRFYI 658
Query: 660 QERFKETFGVESQ--KVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGI 717
+ ++ + + ++ +VDG QGREKD I SCVR+++ + IGFL D RR+NV I
Sbjct: 659 GDYLQKNGKLNPTLYQEIECCSVDGFQGREKDYIIISCVRSNESQGIGFLTDARRLNVAI 718
Query: 718 TRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL--------------FRVSKPYA--- 760
TRA+ +++VG A L D WNNL+ ++ L FR S+ Y
Sbjct: 719 TRARYGLIIVGNAKVLARDNLWNNLLNFMKESKVLVDGNLNDLRQCNLKFRPSQKYVPER 778
Query: 761 SFFSDENLESMRKNAT----TDNVQGADGHVP 788
S F N E+ +T DN+ D +P
Sbjct: 779 SDFQKNNDENDDARSTISYRNDNINNFDNELP 810
>gi|255732109|ref|XP_002550978.1| ATP-dependent helicase NAM7 [Candida tropicalis MYA-3404]
gi|240131264|gb|EER30824.1| ATP-dependent helicase NAM7 [Candida tropicalis MYA-3404]
Length = 993
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 136/413 (32%), Positives = 209/413 (50%), Gaps = 22/413 (5%)
Query: 355 PTTGNELKPEVV--NSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + + + S+ R ++LVCAPSN A+D + +L G++ + + + + V
Sbjct: 454 PGTGKTVTSATIIYHLSKLNREKILVCAPSNVAVDHLAAKLDLLGLKVVRLTARSREDVE 513
Query: 413 IG---LKAHHSVNSVAIDHLVEQKRDDSAADKQKHGATRKDRDSIRSA---ILNEAVIVC 466
L H+ VNS A L + + + + T K +R++ LN+ +VC
Sbjct: 514 SSVSHLALHNLVNSHAKGELKKLIKLKNQVGELSVEDTNKYIKLLRTSEMKALNKCDVVC 573
Query: 467 STLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVIS 526
T + LS+ F V+IDE+ QA EP L+P+ G KQV LVGD QL ++
Sbjct: 574 CTCVGAADKRLSQFK--FRSVLIDESTQASEPEVLIPIVKGAKQVILVGDHQQLGPVILD 631
Query: 527 PVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTT 586
A G SLF+RL G+ L+ QYRMHP + FPS FY+ +L++G +D
Sbjct: 632 RKAADAGLKQSLFERLVFLGHVPIRLEVQYRMHPCLSEFPSNMFYEGSLQNGVTSDDRLI 691
Query: 587 RD-WHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLI--SMYPQLKSS 643
D + F + G+E A S++N E V + KL + P+
Sbjct: 692 EDSTFPWPVIDTPMMFWANYGREELSASGNSYLNRVEAMNVEKIITKLFKDGIQPE---- 747
Query: 644 SQLAIISPYRHQ---VKQFQERFKETFGVESQKV-VDITTVDGCQGREKDVAIFSCVRAS 699
Q+ +I+PY Q + QF Q + V+IT+VD QGREKD I SCVRA+
Sbjct: 748 -QIGVITPYEGQRAYLVQFMSMNSTLLDKRDQYLDVEITSVDAFQGREKDYIILSCVRAN 806
Query: 700 DKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
D +SIGFL+D RR+NV +TR+K ++++G L ++ WN+L+ ++ CL
Sbjct: 807 DSQSIGFLSDPRRLNVALTRSKYGLIILGNPRALCRNRLWNHLLIHFREKGCL 859
>gi|449018313|dbj|BAM81715.1| probable tRNA splicing endonuclease positive effector Sen1p
[Cyanidioschyzon merolae strain 10D]
Length = 1250
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 117/287 (40%), Positives = 162/287 (56%), Gaps = 16/287 (5%)
Query: 484 FDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQ 543
F +V+IDEAAQA E ATL+PL GC++ L GDP QLPATV S + SL +RL
Sbjct: 723 FPIVVIDEAAQATELATLIPLQYGCERCVLAGDPQQLPATVFSRGDAGVALARSLMERLL 782
Query: 544 RAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRD-WHE----YRCFGPF 598
+AG+ +L TQYRMHP + +FP+R FY L++ V R +H GP+
Sbjct: 783 QAGWTGHLLDTQYRMHPAIATFPTRWFYQNQLKNDDCVRSELYRPAFHRTGPPPPLLGPY 842
Query: 599 SFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQ---LAIISPYRHQ 655
F DI E E + A + S N E F + L L Y K+S + L I++PYR Q
Sbjct: 843 CFVDIAEATEERDATTASLSNPKEAAFAMQLVEILYERY--WKASDRVWHLGILTPYRAQ 900
Query: 656 VKQFQERFKETF----GVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKS-IGFLADY 710
++ Q+ ++ G + ++I TVD QGREKDV IFS VR + +S IGF+ D
Sbjct: 901 MRLLQQALDQSGLILPGQQMPCTIEIDTVDAFQGREKDVIIFSAVRTAQHRSGIGFVGDV 960
Query: 711 RRMNVGITRAKSSILVVGCASTLR-EDKHWNNLVKSAEKQDCLFRVS 756
RR+NV +TRAK S++V+G A+ LR W+ L+ AE++ F S
Sbjct: 961 RRLNVALTRAKVSLVVLGHAAALRAHSADWDALLCDAEQRGLYFESS 1007
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQKR 434
R+LV A SN+A+DEIV+R++ G D +R+Y P IVRIG A + A+ +
Sbjct: 524 RLLVTAQSNAAVDEIVVRIMREGFVDGKLRTYYPDIVRIGAGARVHPKARAVTAEARAEA 583
Query: 435 DDSAADKQKHGA 446
A + KH A
Sbjct: 584 FLQALESAKHSA 595
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 56/116 (48%), Gaps = 12/116 (10%)
Query: 183 IHSLITSSVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQS 242
++S I S +A ++++ S ARE AL S+ + +IL + + ++ Q
Sbjct: 317 LNSAIGSENAACTPPTPAIRLMSTLNHARELGALSSIAEMELAPVILDPA--GAAAEQQR 374
Query: 243 WKIPGL----LHEYI-----KENHNASQLEAIHEGLLR-KAFVLIQGPPGTGKTQT 288
PG L Y+ + N SQ EA+ + R + F LI GPPGTGKT+T
Sbjct: 375 ELAPGPQRSELDAYLAVISNQRGLNRSQYEAVRASVHRQRGFALIHGPPGTGKTKT 430
>gi|346326262|gb|EGX95858.1| nonsense transcript regulator [Cordyceps militaris CM01]
Length = 1084
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 134/421 (31%), Positives = 206/421 (48%), Gaps = 57/421 (13%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNS----VAIDHLV 430
+VLVCAPSN A+D++ R+ TG+ K+VR+ K+ V S +A+ V
Sbjct: 492 QVLVCAPSNVAVDQLCERIHRTGL----------KVVRLTAKSREDVESSVSFLALHEQV 541
Query: 431 EQKRDDSAADK-------------QKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALL 477
+S K Q R+ + IL A +VC T +G L
Sbjct: 542 RMSEHNSEFAKLSQLKIEAGELISQDEKKFRQLTKAAEREILTNADVVCCTCVGAGDPRL 601
Query: 478 SKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTS 537
SK+ F V+IDE+ Q+ EP ++PL GCKQV LVGD QL +++ A G S
Sbjct: 602 SKIK--FRSVLIDESTQSAEPECIIPLMLGCKQVVLVGDHKQLGPVIMNKKAAKAGLSQS 659
Query: 538 LFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRD----WHEYR 593
LF+RL + +L TQYRMHP + FPS FYD +L++G E +D W
Sbjct: 660 LFERLMQLRLQPILLNTQYRMHPCLSEFPSNMFYDGSLQNGVTQEQRIRKDVDFPWPVAE 719
Query: 594 CFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLK-SSSQLAIISPY 652
P F+ +E +G+ S++N E V K+++ + + +++ +I+PY
Sbjct: 720 M--PMMFWSNIGNEEISTSGT-SYLNRTEASNV----EKIVTRFFKAGVKPAEIGVITPY 772
Query: 653 RHQVKQFQERFKETFGVESQ---KVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLAD 709
Q + + + G + K V++ +VD QGREKD + SCVR+++ + IGFL+D
Sbjct: 773 EGQ-RSYIVTTMQNSGTSKKDLYKGVEVASVDAFQGREKDFIVLSCVRSNENQGIGFLSD 831
Query: 710 YRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEK------------QDCLFRVSK 757
RR+NV +TRAK ++++G L + + W NL+ Q CL + SK
Sbjct: 832 PRRLNVALTRAKYGLVILGNPRVLSKHELWYNLLTHFRDRRCFVEGPLNNFQQCLLQFSK 891
Query: 758 P 758
P
Sbjct: 892 P 892
Score = 41.6 bits (96), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 29/48 (60%), Gaps = 7/48 (14%)
Query: 241 QSWKIPGLLHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQT 288
+ W PGL + N SQ++AI +L+K LIQGPPGTGKT T
Sbjct: 437 KKWSAPGL------PDLNQSQVDAIRS-VLQKPLSLIQGPPGTGKTVT 477
>gi|328709620|ref|XP_003244017.1| PREDICTED: regulator of nonsense transcripts 1-like [Acyrthosiphon
pisum]
Length = 1125
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 132/405 (32%), Positives = 215/405 (53%), Gaps = 51/405 (12%)
Query: 376 VLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNS----VAIDHLV- 430
VLVCAPSN A+D++ ++ TG+ K+VR+ K+ +++S +A+ + V
Sbjct: 496 VLVCAPSNIAVDQLTEKIHRTGL----------KVVRVCAKSREAIDSPVSFLALHNQVR 545
Query: 431 -----------EQKRDD----SAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSA 475
+Q +D+ S AD++++ A +K + +L A ++C+T +G
Sbjct: 546 KMSCNVELQKFQQLKDETGELSMADEKRYRALKK---AAERELLKAADVICTTCVGAGDP 602
Query: 476 LLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYG 535
L + F ++IDE+ QA EP +VP+ G KQ+ LVGD QL V+ A G
Sbjct: 603 RLVRFK--FHSILIDESMQATEPECMVPVVLGVKQLILVGDHCQLGPVVMCKKAARAGLS 660
Query: 536 TSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCF 595
SLF+RL G L+ QYRMHPE+ FPS FY+ +L++G +D R +
Sbjct: 661 QSLFERLVVLGIRPFRLEVQYRMHPELSRFPSNFFYEGSLQNGVCADD---RKLSKIEFP 717
Query: 596 GPFS----FFDIHEGKESQPAGSG-SWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIIS 650
P + F + +G+E + AGSG S++N E V + + + + Q+ II+
Sbjct: 718 WPVADKPMLFYVTQGQE-EIAGSGTSYLNRTEAANVEKIATRFLRCGVK---PDQIGIIT 773
Query: 651 PYRHQ---VKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFL 707
PY Q + Q+ + ++ + + ++I +VD QGREKD+ I SCVR+++ + IGFL
Sbjct: 774 PYEGQRAYLVQYMQ-YQAPLPAKVYQEIEIASVDAFQGREKDLIIMSCVRSNEHQGIGFL 832
Query: 708 ADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
D RR+NV +TRAK IL+VG L + + WN+L+ + + L
Sbjct: 833 NDPRRLNVALTRAKYGILIVGNPKVLSKQQLWNHLLNYYKANNVL 877
>gi|242076910|ref|XP_002448391.1| hypothetical protein SORBIDRAFT_06g026430 [Sorghum bicolor]
gi|241939574|gb|EES12719.1| hypothetical protein SORBIDRAFT_06g026430 [Sorghum bicolor]
Length = 925
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 99/279 (35%), Positives = 159/279 (56%), Gaps = 5/279 (1%)
Query: 482 HGFDVVIIDEAAQAVEPATLVPLAT-GCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFK 540
+ +++I+DEAAQ E TL+PL G +Q L+GD QLPA V S ++E +G S+F+
Sbjct: 604 NSLELLIVDEAAQLKECETLIPLQLPGIRQALLIGDEYQLPAFVKSTISESASFGRSVFQ 663
Query: 541 RLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDV--EDYTTRDWHEYRCFGPF 598
RL G+ +L QYRMHP++ +FP FYD + DG +V +DY R + FGP+
Sbjct: 664 RLSSLGFSKHLLNVQYRMHPDISNFPVATFYDGKVSDGPNVSHKDYNKR-FLSGNLFGPY 722
Query: 599 SFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQ 658
SF ++ G E+ S N EV V+ + +L S + ++SPY QV+
Sbjct: 723 SFINVEGGHETTEKHGRSLKNTIEVAAVVRMVQRLFKEAVSKGSKVSVGVVSPYNAQVRA 782
Query: 659 FQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGIT 718
QE+ +++ + + V++ +VDG QG E+D+ I S VR++ ++GFL + +R NV +T
Sbjct: 783 IQEKLGKSYTMYNGFSVNVKSVDGFQGAEEDIIIISTVRSNGAGAVGFLTNLQRTNVALT 842
Query: 719 RAKSSILVVGCASTLREDKH-WNNLVKSAEKQDCLFRVS 756
RAK + +VG +TL + W ++K+A + F V+
Sbjct: 843 RAKHCLWIVGNGTTLSSNNTVWQKMIKNARDRGLFFDVN 881
>gi|323347166|gb|EGA81441.1| Nam7p [Saccharomyces cerevisiae Lalvin QA23]
Length = 971
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 135/422 (31%), Positives = 217/422 (51%), Gaps = 43/422 (10%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + S+ ++ R+LVCAPSN A+D + +L + G+ K+VR
Sbjct: 432 PGTGKTVTSATIVYHLSKIHKDRILVCAPSNVAVDHLAAKLRDLGL----------KVVR 481
Query: 413 IGLKAHH----SVNSVAIDHLVEQ----------KRDDSAADKQKHGATR--KDRDSIRS 456
+ K+ SV+++A+ +LV + K D + R K +
Sbjct: 482 LTAKSREDVESSVSNLALHNLVGRGAKGELKNLLKLKDEVGELSASDTKRFVKLVRKTEA 541
Query: 457 AILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGD 516
ILN+A +VC T +G +L+ F V+IDE+ QA P L+P+ G KQV LVGD
Sbjct: 542 EILNKADVVCCTCVGAGD---KRLDTKFRTVLIDESTQASXPECLIPIVKGAKQVILVGD 598
Query: 517 PVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALE 576
QL ++ A G SLF+RL G+ L+ QYRM+P + FPS FY+ +L+
Sbjct: 599 HQQLGPVILERKAADAGLKQSLFERLISLGHVPIRLEVQYRMNPYLSEFPSNMFYEGSLQ 658
Query: 577 DGSDVEDYTTRDWH-EYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLI- 634
+G +E T + + G F + G+E A S++N E + KL
Sbjct: 659 NGVTIEQRTVPNSKFPWPIRGIPMMFWANYGREEISANGTSFLNRIEAMNCERIITKLFR 718
Query: 635 -SMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKV---VDITTVDGCQGREKDV 690
+ P+ Q+ +I+PY Q + + ++ + G + + V++ +VD QGREKD
Sbjct: 719 DGVKPE-----QIGVITPYEGQ-RAYILQYMQMNGSLDKDLYIKVEVASVDAFQGREKDY 772
Query: 691 AIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQD 750
I SCVRA+++++IGFL D RR+NVG+TRAK ++++G +L + WN+L+ ++
Sbjct: 773 IILSCVRANEQQAIGFLRDPRRLNVGLTRAKYGLVILGNPRSLARNTLWNHLLIHFREKG 832
Query: 751 CL 752
CL
Sbjct: 833 CL 834
>gi|443896129|dbj|GAC73473.1| RNA helicase nonsense mRNA reducing factor [Pseudozyma antarctica
T-34]
Length = 1090
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 129/404 (31%), Positives = 208/404 (51%), Gaps = 49/404 (12%)
Query: 376 VLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNS------------ 423
VLVCAPSN A+D++ ++ TG+ K+VR+ K+ +++S
Sbjct: 531 VLVCAPSNVAVDQLTEKIHATGL----------KVVRLTAKSREALDSPIGFLTLHEQVA 580
Query: 424 -----VAIDHLVEQKRDD---SAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSA 475
V + L++ K + S++D++K+ A + + IL+ A ++C T G
Sbjct: 581 NNDTHVELQKLIQLKNEQGELSSSDERKYKALTR---ACEKEILSTADVICCTCVGCGDP 637
Query: 476 LLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYG 535
LSK+N F V++DEA QA EP ++PL GCKQV VGD +QL +++ A G
Sbjct: 638 RLSKIN--FRTVLVDEATQAAEPECMIPLVMGCKQVVFVGDHLQLGPVIMNKKAARAGLS 695
Query: 536 TSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVED--YTTRDWHEYR 593
SLF+RL G L+ QYRMHP + FPS FY+ L++G ++ D+
Sbjct: 696 QSLFERLIMLGNRPIRLEIQYRMHPCLSEFPSNMFYEGTLQNGITAQERLRAKVDFPWPV 755
Query: 594 CFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSS-QLAIISPY 652
P FF + G+E + S++N E V K+++ + + Q+ I++PY
Sbjct: 756 PSLPMMFFQ-NLGQEEISSSGTSFLNRTEASNV----EKIVTRFFKAGVEPWQIGIVTPY 810
Query: 653 RHQ----VKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLA 708
Q V Q + E K V++ +VD QGREKD I SCVR+++ + IGFL+
Sbjct: 811 EGQRSYIVNHMQ--LHGSLKKELYKEVEVASVDAFQGREKDYIILSCVRSNEHQGIGFLS 868
Query: 709 DYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
D RR+NV +TRA+ ++++G L + W+ L+ +++ CL
Sbjct: 869 DPRRLNVALTRARFGLVILGNPKVLNKHPLWHYLLVHYKEKGCL 912
>gi|407039213|gb|EKE39508.1| regulator of nonsense transcripts, putative [Entamoeba nuttalli
P19]
Length = 937
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 126/382 (32%), Positives = 198/382 (51%), Gaps = 25/382 (6%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIR------------DENIRSYTPK-IVRIGLKAHHSV 421
+VLVCAPSN A+D++ ++ TG++ DE++ Y+ K ++ LK +
Sbjct: 448 KVLVCAPSNIAVDQLGTKITETGVKVIRVYSKSREIEDESLYDYSLKTLMEEQLKKDKEM 507
Query: 422 NSVAIDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLN 481
++ E K D + D +K + I ++L E ++C T + + LS +
Sbjct: 508 FAL----YQEYKDDPDSLDIVSKTTIQKRINEIELSLLRETDVICCTCCGALDSRLSGIL 563
Query: 482 HGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKR 541
D V+IDE+ QA EP L+ L KQ+FLVGD QL + SP A+ G G +F R
Sbjct: 564 EHIDTVLIDESTQADEPECLICLNNSVKQLFLVGDHCQLGPILNSPRAKKNGLGLPMFSR 623
Query: 542 LQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDV--EDYTTRDWHEYRCFGPFS 599
L + G+ L+ QYRMHP + F S+ FYD L++G + + + ++ P
Sbjct: 624 LLQLGHEPYRLQFQYRMHPCLSEFSSQTFYDGVLQNGVTALERQFPSLKYFWFKQNKPMM 683
Query: 600 FFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQF 659
F + GKES + S++N +E V L+ +I M S SQ+ +I+PY Q +
Sbjct: 684 FIAAN-GKESYGSNGTSYLNDEE---VFLIEQIIIKMLGNKVSPSQIGVITPYIAQKQAI 739
Query: 660 QERFKETFGVESQKV--VDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGI 717
R + ++ ++I +VD QGREKD IFS VR+++ IGFL+ +R+NV I
Sbjct: 740 ISRLSLNRRISEAQLNDIEIASVDSFQGREKDFIIFSTVRSNEISDIGFLSIPQRLNVSI 799
Query: 718 TRAKSSILVVGCASTLREDKHW 739
TRAK ++VVG TL ++ W
Sbjct: 800 TRAKYGLVVVGNPETLMQNPLW 821
>gi|357143184|ref|XP_003572832.1| PREDICTED: LOW QUALITY PROTEIN: helicase sen1-like [Brachypodium
distachyon]
Length = 924
Score = 187 bits (474), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 110/297 (37%), Positives = 161/297 (54%), Gaps = 11/297 (3%)
Query: 464 IVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLAT-GCKQVFLVGDPVQLPA 522
++C+ S S L K FD++++DEAAQ E +L+PL G + LVGD QLPA
Sbjct: 589 VLCTASSSSRLHYLQK-AEPFDLLVVDEAAQLKECESLLPLQIPGIRLAVLVGDEYQLPA 647
Query: 523 TVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVE 582
V S V E +G SLF+RL G+P +L QYRMHP + FP FY+ + DG E
Sbjct: 648 LVKSKVCEDACFGRSLFERLSSLGHPKHLLDVQYRMHPGISKFPVSSFYESRITDG---E 704
Query: 583 DYTTRDWHEYRCFGP----FSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYP 638
+ RD+ GP +SF +I GKES S +N EV V + +L
Sbjct: 705 NVLKRDYERKHLTGPMYGSYSFINIEGGKESTGKFDKSLVNTIEVAAVTRIVQRLFKECM 764
Query: 639 QLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKV-VDITTVDGCQGREKDVAIFSCVR 697
+ + + ++SPY+ QV+ QE+ +T+ V + V + +VDG QG E+D+ I S VR
Sbjct: 765 ETRRKLSVGVVSPYKGQVRAIQEKLGKTYEVRPGEFSVKVRSVDGFQGAEEDIIIISTVR 824
Query: 698 ASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKH-WNNLVKSAEKQDCLF 753
++ S+GFL + R NV +TRAK + ++G A+TL K W +V A+ + C F
Sbjct: 825 SNAAGSVGFLNNVNRTNVALTRAKHCLWILGNATTLVSSKTIWQKIVADAKDRGCFF 881
>gi|326479319|gb|EGE03329.1| hypothetical protein TEQG_02362 [Trichophyton equinum CBS 127.97]
Length = 1093
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 142/475 (29%), Positives = 230/475 (48%), Gaps = 50/475 (10%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIG---LKAHHSVNS-------V 424
+VLVCAPSN A+D++ + TG++ + + + + V L H V + V
Sbjct: 484 QVLVCAPSNVAVDQLCECIHRTGLKTVRVTAKSREDVESPVRHLSLHEQVRNNDSNIELV 543
Query: 425 AIDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGF 484
++ L + + S+ D++K+ ++ + IL A ++C T +G L+K F
Sbjct: 544 KLNQLKTELGELSSQDEKKY---KQLTRAAEKEILTNADVICCTCVGAGDPRLAKSK--F 598
Query: 485 DVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQR 544
V+IDE+ Q+ EP ++PL GCKQ LVGD QL +++ A G SLF+RL
Sbjct: 599 RTVLIDESTQSAEPECMIPLVLGCKQAVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVI 658
Query: 545 AGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR--DWHEYRCFGPFSFFD 602
G L QYRMHP + F S FY+ +L++G ED + D+ P F+
Sbjct: 659 LGCAPIRLNVQYRMHPCLSQFSSNMFYEGSLQNGVSSEDRLLKNVDFPWPVADKPMMFWS 718
Query: 603 IHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLK-SSSQLAIISPYRHQ----VK 657
+ G E A S++N E V K+++ + + S + II+PY Q V
Sbjct: 719 -NLGNEEISASGTSYLNRTEAANV----EKIVTRFFKAGVKPSGIGIITPYEGQRSYVVS 773
Query: 658 QFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGI 717
Q TF E K +++ +VD QGREKD + SCVR++D + IGFL+D RR+NV +
Sbjct: 774 SMQ--LTGTFKKEWYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGFLSDPRRLNVAL 831
Query: 718 TRAKSSILVVGCASTLREDKHWNNLVKSAEKQDC------------LFRVSKPYASFFSD 765
TRAK ++++G L + WN L++ ++Q+C L + S+P ++
Sbjct: 832 TRAKYGLVILGNPKVLSKHPLWNYLLRHFKEQNCLVEGPLSNLQTSLIQFSRPKQAYRGP 891
Query: 766 ENLE---SMRKNATTDNVQGADGHVPHDDETMHYANTGDADQGQADDIDNADGDA 817
+ + + N + + G +GH H D Y + G DD+ + A
Sbjct: 892 QRFQMSFNHASNVDSSMLNGRNGH--HHD----YQDAGSVVSYIPDDVSSVHSSA 940
>gi|70949042|ref|XP_743968.1| regulator of nonsense transcripts [Plasmodium chabaudi chabaudi]
gi|56523717|emb|CAH78222.1| regulator of nonsense transcripts, putative [Plasmodium chabaudi
chabaudi]
Length = 670
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 128/381 (33%), Positives = 203/381 (53%), Gaps = 40/381 (10%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHL----- 429
+VLV APSN A+D++ +R+ TG+ K+VR+ ++ SV+S+A D+L
Sbjct: 147 KVLVTAPSNVAVDQLSVRIHRTGL----------KVVRLCARSRESVSSIA-DYLYLHNQ 195
Query: 430 VEQKRDDSAAD-------KQKHG-ATRKDRDSIRSAILN-------EAVIVCSTLSFSGS 474
V+ + D + K++ G ++KD + ++ IL+ EA ++C+T +
Sbjct: 196 VKLLKTDVGEELNKLLELKEEVGELSQKDENRLKKLILHAEYKILIEADVICTTCVGAMD 255
Query: 475 ALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGY 534
L K F+ V++DEA Q+ EP LVPL T KQ+ LVGD QL ++ A G
Sbjct: 256 KRLKKFR--FNQVLVDEATQSTEPECLVPLVTA-KQIVLVGDHCQLGPIIVCKKAASAGL 312
Query: 535 GTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVED--YTTRDWHEY 592
G SLF+RL G L+ QYRMHP + FPS FYD L++G +++ Y +++
Sbjct: 313 GKSLFERLVMLGITPFRLEVQYRMHPCLSEFPSYVFYDGCLQNGITLKEREYPLKNFPWP 372
Query: 593 RCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPY 652
P F++ G E A S++N E + +L L++ LK++ Q+ +I+PY
Sbjct: 373 NSKYPMFFYN-SNGLEEMSASGTSYLNRSEAQNMEILVRALLN--SGLKAT-QIGVITPY 428
Query: 653 RHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRR 712
Q F++ + +++ +VD QGREKD + SCVR++ K IGFL D RR
Sbjct: 429 EGQRAYITSLFQKNISYQHCLDIEVASVDAFQGREKDFILLSCVRSNKKLGIGFLNDPRR 488
Query: 713 MNVGITRAKSSILVVGCASTL 733
+NV +TRAK +++ G A L
Sbjct: 489 LNVALTRAKYGLIICGNAKVL 509
>gi|167384498|ref|XP_001736978.1| nonsense-mediated mRNA decay protein [Entamoeba dispar SAW760]
gi|165900437|gb|EDR26756.1| nonsense-mediated mRNA decay protein, putative [Entamoeba dispar
SAW760]
Length = 937
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 123/379 (32%), Positives = 198/379 (52%), Gaps = 19/379 (5%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQKR 434
+VLVCAPSN A+D++ ++++ TG++ + S + ++ L +S+ ++ I+ L + K
Sbjct: 448 KVLVCAPSNIAVDQLGIKIIETGVKVIRVYSKSRELAEESLH-DYSLKTLMIEQLKKDKE 506
Query: 435 ----------DDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGF 484
D + D A +K + I A+L E ++C T + L+ +
Sbjct: 507 MFLLYQDYKDDPDSLDIVNKTAIQKRINEIELALLRETDVICCTCCGALDNRLNGILEHI 566
Query: 485 DVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQR 544
D V+IDE+ QA EP L+ L KQ+FLVGD QL + S A+ G G +F RL +
Sbjct: 567 DTVLIDESTQADEPECLICLNNSVKQLFLVGDHCQLGPILNSSRAKKNGLGLPMFSRLLQ 626
Query: 545 AGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDV--EDYTTRDWHEYRCFGPFSFFD 602
G+ L+ QYRMHP + F S+ FYD L++G + + + ++ P F
Sbjct: 627 LGHEPYRLQFQYRMHPCLSEFSSQTFYDGVLQNGVTALERQFPSLKYFWFKQNKPMMFIA 686
Query: 603 IHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQER 662
+ GKES + S++N +E V ++ +I M SQ+ +I+PY Q + R
Sbjct: 687 AN-GKESYGSNGTSYLNDEE---VFIIEQIIIKMLVNKVDPSQIGVITPYIAQKQAIISR 742
Query: 663 FKETFGVESQKV--VDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRA 720
V ++ ++I +VD QGREKD IFS VR+++ IGFL+ +R+NV ITRA
Sbjct: 743 LSLNRRVSEAQLNDIEIASVDSFQGREKDFIIFSTVRSNEISDIGFLSIPQRLNVSITRA 802
Query: 721 KSSILVVGCASTLREDKHW 739
K ++VVG TL ++ W
Sbjct: 803 KYGLVVVGNPETLMQNPLW 821
>gi|302660352|ref|XP_003021856.1| hypothetical protein TRV_04033 [Trichophyton verrucosum HKI 0517]
gi|291185774|gb|EFE41238.1| hypothetical protein TRV_04033 [Trichophyton verrucosum HKI 0517]
Length = 1080
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 129/395 (32%), Positives = 204/395 (51%), Gaps = 29/395 (7%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIG---LKAHHSVNS-------V 424
+VLVCAPSN A+D++ + TG++ + + + + V L H V + V
Sbjct: 471 QVLVCAPSNVAVDQLCECIHRTGLKTVRVTAKSREDVESPVRHLSLHEQVRNNDSNIELV 530
Query: 425 AIDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGF 484
++ L + + S+ D++K+ ++ + IL A ++C T +G L+K F
Sbjct: 531 KLNQLKTELGELSSQDEKKY---KQLTRAAEKEILTNADVICCTCVGAGDPRLAKSK--F 585
Query: 485 DVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQR 544
V+IDE+ Q+ EP ++PL GCKQ LVGD QL +++ A G SLF+RL
Sbjct: 586 RTVLIDESTQSAEPECMIPLVLGCKQAVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVI 645
Query: 545 AGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR--DWHEYRCFGPFSFFD 602
G L QYRMHP + F S FY+ +L++G ED + D+ P F+
Sbjct: 646 LGCAPIRLNVQYRMHPCLSQFSSNMFYEGSLQNGVSSEDRLLKNVDFPWPVADKPMMFWS 705
Query: 603 IHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLK-SSSQLAIISPYRHQ----VK 657
+ G E A S++N E V K+++ + + S + II+PY Q V
Sbjct: 706 -NLGNEEISASGTSYLNRTEAANV----EKIVTRFFKAGVKPSGIGIITPYEGQRSYVVS 760
Query: 658 QFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGI 717
Q TF E K +++ +VD QGREKD + SCVR++D + IGFL+D RR+NV +
Sbjct: 761 SMQ--LTGTFKKEWYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGFLSDPRRLNVAL 818
Query: 718 TRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
TRAK ++++G L + WN L++ ++Q+CL
Sbjct: 819 TRAKYGLVILGNPKVLSKHPLWNYLLRHFKEQNCL 853
>gi|347965371|ref|XP_322028.4| AGAP001133-PA [Anopheles gambiae str. PEST]
gi|333470541|gb|EAA01007.4| AGAP001133-PA [Anopheles gambiae str. PEST]
Length = 1161
Score = 186 bits (473), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 125/387 (32%), Positives = 212/387 (54%), Gaps = 34/387 (8%)
Query: 376 VLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIG---LKAHHSVNSVA------- 425
+LVCAPSN+A+D++ ++ T ++ + + + + + L H+ + ++A
Sbjct: 506 ILVCAPSNTAVDQLTEKIHRTNLKVVRVCARSREAIDSPVSFLALHNQIRNMAQNSELKK 565
Query: 426 IDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFD 485
+ L ++ + S +D++++ + +K + +L A ++C T +G L ++ F+
Sbjct: 566 LQQLKDETGELSLSDERRYRSLKKQAER---ELLEAADVICCTCVGAGDLRLQRIK--FN 620
Query: 486 VVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRA 545
++IDE+ Q+ EP +VP+ G KQ+ LVGD QL V+ A G SLF+RL
Sbjct: 621 SILIDESMQSTEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVAL 680
Query: 546 GYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR---DWHEYRCFGPFSFFD 602
G L+ QYRMHPE+ FPS FY+ +L++G ++ + W C P FF
Sbjct: 681 GIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCADERKLKVDFPWPSPDC--PM-FFL 737
Query: 603 IHEGKESQPAGSG-SWINIDEVDFVLLLFHKLISMYPQLKSS---SQLAIISPYRHQVKQ 658
+ +G+E + AGSG S++N E V K+ + + LK+ Q+ II+PY Q
Sbjct: 738 VTQGQE-EIAGSGTSYLNRTEASNV----EKITTRF--LKAGIKPDQIGIITPYEGQRAY 790
Query: 659 FQERFKETFGVESQ--KVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVG 716
+ + + S+ + ++I +VD QGREKD+ I SCVRA++ + IGFL D RR+NV
Sbjct: 791 LVQYMQYQGSLHSKLYQEIEIASVDAFQGREKDIIIMSCVRANEHQGIGFLNDPRRLNVA 850
Query: 717 ITRAKSSILVVGCASTLREDKHWNNLV 743
+TRAK I++VG L + + WN+L+
Sbjct: 851 LTRAKYGIIIVGNPKVLAKQELWNHLL 877
>gi|326469176|gb|EGD93185.1| ATP-dependent DNA helicase [Trichophyton tonsurans CBS 112818]
Length = 1064
Score = 186 bits (473), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 129/395 (32%), Positives = 204/395 (51%), Gaps = 29/395 (7%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIG---LKAHHSVNS-------V 424
+VLVCAPSN A+D++ + TG++ + + + + V L H V + V
Sbjct: 455 QVLVCAPSNVAVDQLCECIHRTGLKTVRVTAKSREDVESPVRHLSLHEQVRNNDSNIELV 514
Query: 425 AIDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGF 484
++ L + + S+ D++K+ ++ + IL A ++C T +G L+K F
Sbjct: 515 KLNQLKTELGELSSQDEKKY---KQLTRAAEKEILTNADVICCTCVGAGDPRLAKSK--F 569
Query: 485 DVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQR 544
V+IDE+ Q+ EP ++PL GCKQ LVGD QL +++ A G SLF+RL
Sbjct: 570 RTVLIDESTQSAEPECMIPLVLGCKQAVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVI 629
Query: 545 AGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR--DWHEYRCFGPFSFFD 602
G L QYRMHP + F S FY+ +L++G ED + D+ P F+
Sbjct: 630 LGCAPIRLNVQYRMHPCLSQFSSNMFYEGSLQNGVSSEDRLLKNVDFPWPVADKPMMFWS 689
Query: 603 IHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLK-SSSQLAIISPYRHQ----VK 657
+ G E A S++N E V K+++ + + S + II+PY Q V
Sbjct: 690 -NLGNEEISASGTSYLNRTEAANV----EKIVTRFFKAGVKPSGIGIITPYEGQRSYVVS 744
Query: 658 QFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGI 717
Q TF E K +++ +VD QGREKD + SCVR++D + IGFL+D RR+NV +
Sbjct: 745 SMQ--LTGTFKKEWYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGFLSDPRRLNVAL 802
Query: 718 TRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
TRAK ++++G L + WN L++ ++Q+CL
Sbjct: 803 TRAKYGLVILGNPKVLSKHPLWNYLLRHFKEQNCL 837
>gi|302505946|ref|XP_003014930.1| hypothetical protein ARB_06689 [Arthroderma benhamiae CBS 112371]
gi|291178501|gb|EFE34290.1| hypothetical protein ARB_06689 [Arthroderma benhamiae CBS 112371]
Length = 1080
Score = 186 bits (473), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 129/395 (32%), Positives = 204/395 (51%), Gaps = 29/395 (7%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIG---LKAHHSVNS-------V 424
+VLVCAPSN A+D++ + TG++ + + + + V L H V + V
Sbjct: 471 QVLVCAPSNVAVDQLCECIHRTGLKTVRVTAKSREDVESPVRHLSLHEQVRNNDSNIELV 530
Query: 425 AIDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGF 484
++ L + + S+ D++K+ ++ + IL A ++C T +G L+K F
Sbjct: 531 KLNQLKTELGELSSQDEKKY---KQLTRAAEKEILTNADVICCTCVGAGDPRLAKSK--F 585
Query: 485 DVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQR 544
V+IDE+ Q+ EP ++PL GCKQ LVGD QL +++ A G SLF+RL
Sbjct: 586 RTVLIDESTQSAEPECMIPLVLGCKQAVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVI 645
Query: 545 AGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR--DWHEYRCFGPFSFFD 602
G L QYRMHP + F S FY+ +L++G ED + D+ P F+
Sbjct: 646 LGCAPIRLNVQYRMHPCLSQFSSNMFYEGSLQNGVSSEDRLLKNVDFPWPVADKPMMFWS 705
Query: 603 IHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLK-SSSQLAIISPYRHQ----VK 657
+ G E A S++N E V K+++ + + S + II+PY Q V
Sbjct: 706 -NLGNEEISASGTSYLNRTEAANV----EKIVTRFFKAGVKPSGIGIITPYEGQRSYVVS 760
Query: 658 QFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGI 717
Q TF E K +++ +VD QGREKD + SCVR++D + IGFL+D RR+NV +
Sbjct: 761 SMQ--LTGTFKKEWYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGFLSDPRRLNVAL 818
Query: 718 TRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
TRAK ++++G L + WN L++ ++Q+CL
Sbjct: 819 TRAKYGLVILGNPKVLSKHPLWNYLLRHFKEQNCL 853
>gi|327293656|ref|XP_003231524.1| ATP-dependent DNA helicase [Trichophyton rubrum CBS 118892]
gi|326466152|gb|EGD91605.1| ATP-dependent DNA helicase [Trichophyton rubrum CBS 118892]
Length = 1093
Score = 186 bits (473), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 129/395 (32%), Positives = 204/395 (51%), Gaps = 29/395 (7%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIG---LKAHHSVNS-------V 424
+VLVCAPSN A+D++ + TG++ + + + + V L H V + V
Sbjct: 484 QVLVCAPSNVAVDQLCECIHRTGLKTVRVTAKSREDVESPVRHLSLHEQVRNNDSNIELV 543
Query: 425 AIDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGF 484
++ L + + S+ D++K+ ++ + IL A ++C T +G L+K F
Sbjct: 544 KLNQLKTELGELSSQDEKKY---KQLTRAAEKEILTNADVICCTCVGAGDPRLAKSK--F 598
Query: 485 DVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQR 544
V+IDE+ Q+ EP ++PL GCKQ LVGD QL +++ A G SLF+RL
Sbjct: 599 RTVLIDESTQSAEPECMIPLVLGCKQAVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVI 658
Query: 545 AGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR--DWHEYRCFGPFSFFD 602
G L QYRMHP + F S FY+ +L++G ED + D+ P F+
Sbjct: 659 LGCAPIRLNVQYRMHPCLSQFSSNMFYEGSLQNGVSSEDRLLKNVDFPWPVADKPMMFWS 718
Query: 603 IHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLK-SSSQLAIISPYRHQ----VK 657
+ G E A S++N E V K+++ + + S + II+PY Q V
Sbjct: 719 -NLGNEEISASGTSYLNRTEAANV----EKIVTRFFKAGVKPSGIGIITPYEGQRSYVVS 773
Query: 658 QFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGI 717
Q TF E K +++ +VD QGREKD + SCVR++D + IGFL+D RR+NV +
Sbjct: 774 SMQ--LTGTFKKEWYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGFLSDPRRLNVAL 831
Query: 718 TRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
TRAK ++++G L + WN L++ ++Q+CL
Sbjct: 832 TRAKYGLVILGNPKVLSKHPLWNYLLRHFKEQNCL 866
>gi|315049715|ref|XP_003174232.1| ATP-dependent helicase NAM7 [Arthroderma gypseum CBS 118893]
gi|311342199|gb|EFR01402.1| ATP-dependent helicase NAM7 [Arthroderma gypseum CBS 118893]
Length = 1094
Score = 186 bits (473), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 129/395 (32%), Positives = 204/395 (51%), Gaps = 29/395 (7%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIG---LKAHHSVNS-------V 424
+VLVCAPSN A+D++ + TG++ + + + + V L H V + V
Sbjct: 485 QVLVCAPSNVAVDQLCECIHRTGLKTVRVTAKSREDVESPVRHLSLHEQVRNNDSNIELV 544
Query: 425 AIDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGF 484
++ L + + S+ D++K+ ++ + IL A ++C T +G L+K F
Sbjct: 545 KLNQLKTELGELSSQDEKKY---KQLTRAAEKEILTNADVICCTCVGAGDPRLAKSK--F 599
Query: 485 DVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQR 544
V+IDE+ Q+ EP ++PL GCKQ LVGD QL +++ A G SLF+RL
Sbjct: 600 RTVLIDESTQSAEPECMIPLVLGCKQAVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVI 659
Query: 545 AGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR--DWHEYRCFGPFSFFD 602
G L QYRMHP + F S FY+ +L++G ED + D+ P F+
Sbjct: 660 LGCAPIRLNVQYRMHPCLSQFSSNMFYEGSLQNGVSSEDRLLKNVDFPWPVADKPMMFWS 719
Query: 603 IHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLK-SSSQLAIISPYRHQ----VK 657
+ G E A S++N E V K+++ + + S + II+PY Q V
Sbjct: 720 -NLGNEEISASGTSYLNRTEAANV----EKIVTRFFKAGVKPSGIGIITPYEGQRSYVVS 774
Query: 658 QFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGI 717
Q TF E K +++ +VD QGREKD + SCVR++D + IGFL+D RR+NV +
Sbjct: 775 SMQ--LTGTFKKEWYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGFLSDPRRLNVAL 832
Query: 718 TRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
TRAK ++++G L + WN L++ ++Q+CL
Sbjct: 833 TRAKYGLVILGNPKVLSKHPLWNYLLRHFKEQNCL 867
>gi|413919136|gb|AFW59068.1| hypothetical protein ZEAMMB73_252554 [Zea mays]
Length = 1056
Score = 186 bits (473), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 101/279 (36%), Positives = 157/279 (56%), Gaps = 5/279 (1%)
Query: 481 NHGFDVVIIDEAAQAVEPATLVPLAT-GCKQVFLVGDPVQLPATVISPVAEHLGYGTSLF 539
N +++I+DEAAQ E TL+PL G KQ L+GD QLPA V S +++ +G S+F
Sbjct: 741 NISLELLIVDEAAQVKECETLIPLQLPGIKQAILIGDEYQLPALVKSKISDSAKFGRSVF 800
Query: 540 KRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDV--EDYTTRDWHEYRCFGP 597
+RL GY +L QYRMHPE+ FP +FY + DG +V ++Y R + + FGP
Sbjct: 801 ERLSSLGYSKHLLNVQYRMHPEISKFPVSKFYGGKISDGPNVTHKNYGKR-FLAGKWFGP 859
Query: 598 FSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVK 657
+SF ++ G E+ + S N EV V + +L + ++ + ++SPY QV+
Sbjct: 860 YSFINVDCGHETTEKNARSLKNTIEVVVVARMVQRLYNETVSTRTKLSVGVVSPYNAQVR 919
Query: 658 QFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGI 717
QE K+T+ V + +VDG QG E+D+ I S VR++ S+GFL++ +R NV +
Sbjct: 920 AIQEELKKTYRSYDGFSVKVKSVDGFQGAEEDIIIISTVRSNGAGSVGFLSNLQRANVAL 979
Query: 718 TRAKSSILVVGCAST-LREDKHWNNLVKSAEKQDCLFRV 755
TRAK + +VG +T L + W ++ + + C F V
Sbjct: 980 TRAKHCLWIVGNGTTLLSSNSIWQKIINDVQNRGCFFDV 1018
>gi|218195424|gb|EEC77851.1| hypothetical protein OsI_17107 [Oryza sativa Indica Group]
Length = 1011
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 102/278 (36%), Positives = 157/278 (56%), Gaps = 5/278 (1%)
Query: 484 FDVVIIDEAAQAVEPATLVPLAT-GCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRL 542
+++++DEAAQ E TL+P+ G KQ +GD QLPA V S ++++ +G S+F+RL
Sbjct: 631 LELLVVDEAAQLKECETLIPMQLPGIKQAVFIGDECQLPALVKSKISDNADFGRSVFERL 690
Query: 543 QRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDV--EDYTTRDWHEYRCFGPFSF 600
GY +L QYRM PE+ FP FYD + DG +V ++Y R+ + FGP+SF
Sbjct: 691 SSLGYNKHLLNIQYRMRPEISKFPVASFYDGKISDGPNVVSKNYK-RNILPGKMFGPYSF 749
Query: 601 FDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQ 660
++ G E+ S N EV VL + +L L S + ++SPY QV+ Q
Sbjct: 750 INVDGGHETTEKHGRSLKNTIEVAAVLWIVRRLFEESVFLGSKLTVGVVSPYNAQVRAIQ 809
Query: 661 ERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRA 720
E+ +T+ + V + +VDG QG E+DV I S VR++ S+GFL + +R NV +TRA
Sbjct: 810 EKIGKTYDMYDGFSVKVKSVDGFQGAEEDVIIISTVRSNRAGSVGFLTNLQRTNVALTRA 869
Query: 721 KSSILVVGCASTLREDKH-WNNLVKSAEKQDCLFRVSK 757
K + +VG +TL ++ W +V A+ + C F S+
Sbjct: 870 KHCLWIVGNGTTLSNNRSVWQKVVNDAKHRGCFFEASE 907
>gi|340369264|ref|XP_003383168.1| PREDICTED: regulator of nonsense transcripts 1-like [Amphimedon
queenslandica]
Length = 1081
Score = 186 bits (472), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 128/403 (31%), Positives = 205/403 (50%), Gaps = 43/403 (10%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNS----VAIDHLV 430
+VLVCAPSN A+D++ ++ TG+ K+VR+ K+ +++S +A+ + V
Sbjct: 497 QVLVCAPSNIAVDQLTEKIHKTGL----------KVVRLCAKSREAIDSPVSFLALHNQV 546
Query: 431 EQKRDDSAADKQKHGATRKDRDSIRSA---------------ILNEAVIVCSTLSFSGSA 475
Q DS + +K + D+ + S +L A ++C T +G
Sbjct: 547 IQLAKDSYPELKKLQQLKDDQGELSSTDEKRYTSLKRQLEKELLLGADVICCTCVSAGDP 606
Query: 476 LLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYG 535
L+K + F +V+IDE+ QA EP +VP+ G KQV LVGD QL ++ A +
Sbjct: 607 RLAKFS--FKMVLIDESTQATEPECMVPIVMGSKQVVLVGDHCQLGPVIMCKKAANARLS 664
Query: 536 TSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCF 595
SLF+RL L+ QYRMHP + FPS FYD L++ E+ R E
Sbjct: 665 QSLFERLVLLNIKPIRLEVQYRMHPALTEFPSSVFYDGTLQNAVSPEE---RRMDEVNFP 721
Query: 596 GPF----SFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISP 651
P FF G+E + S++N E V + KL+ Q+ +I+P
Sbjct: 722 WPNVDKPMFFWCSFGQEEISSSGTSYLNRTEAVNVEKVVTKLMK---NGVKPVQIGVITP 778
Query: 652 YRHQVKQFQERFKETFGVESQ--KVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLAD 709
Y Q ++ + G+ S+ + +++ +VD QGREKD I SCVR+++ + IGFL D
Sbjct: 779 YEGQRAYVVQQMQFNGGMSSKLYEQLEVASVDAFQGREKDFIILSCVRSNEHQGIGFLND 838
Query: 710 YRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
RR+NV +TRAK ++++G A L ++ W++L+K ++Q L
Sbjct: 839 ARRLNVALTRAKYGVIIIGNAKVLSRNELWHHLIKEYQEQGLL 881
>gi|427788499|gb|JAA59701.1| Hypothetical protein [Rhipicephalus pulchellus]
Length = 1125
Score = 186 bits (472), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 128/397 (32%), Positives = 212/397 (53%), Gaps = 53/397 (13%)
Query: 376 VLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSV----------- 424
VLVCAPSN A+D++ ++ TG+R +VR+ K+ ++NS
Sbjct: 498 VLVCAPSNIAVDQLTEKVHQTGLR----------VVRLCAKSREALNSPVSFLALHNQIR 547
Query: 425 AID-----HLVEQKRDD----SAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSA 475
++D H ++Q +D+ S+AD++++ R + + +L A ++C T +G
Sbjct: 548 SMDGHSELHKLQQLKDETGELSSADEKRY---RMLKKACERELLEAADVICCTCVGAGDP 604
Query: 476 LLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYG 535
L++ F ++IDE+ QA EP +VP+ G KQ+ LVGD QL V+ A G
Sbjct: 605 RLARFK--FHSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAARAGLS 662
Query: 536 TSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR--DWHEYR 593
SLF+RL G L+ QYRMHP++ FPS FY+ +L++G ++ R D+ +
Sbjct: 663 QSLFERLVVLGIRPLRLEVQYRMHPQLAQFPSNFFYEGSLQNGVFADERRMRGLDFPWPQ 722
Query: 594 CFGPFSFFDIHEGKESQPAGSG-SWINIDEVDFVLLLFHKLI--SMYPQLKSSSQLAIIS 650
P F+ +G+E AGSG S++N E V + + + + PQ Q+ +I+
Sbjct: 723 PERPMLFYAC-QGQEEM-AGSGTSYLNRTEAALVEKICTRFLRSGVKPQ-----QVGVIT 775
Query: 651 PYRHQ----VKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGF 706
PY Q V+ Q F+ + + +++ +VD QGREKD+ + SCVR+++ + IGF
Sbjct: 776 PYEGQRAYLVQHMQ--FQGALHSKLYQEIEVASVDAFQGREKDLIVMSCVRSNEHQGIGF 833
Query: 707 LADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLV 743
L D RR+NV +TRA+ +++VG L + WN+L+
Sbjct: 834 LNDPRRLNVALTRARYGLIIVGNPKVLSKQPLWNHLL 870
>gi|157130590|ref|XP_001661931.1| nonsense-mediated mrna decay protein 1 (rent1) [Aedes aegypti]
gi|108871854|gb|EAT36079.1| AAEL011817-PA [Aedes aegypti]
Length = 1121
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 128/394 (32%), Positives = 211/394 (53%), Gaps = 48/394 (12%)
Query: 376 VLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNS----VAIDHLV- 430
VLVCAPSN+A+D++ E I + K+VR+ K+ ++ S +A+ + +
Sbjct: 509 VLVCAPSNTAVDQLT----------EKIHRTSLKVVRVCAKSREAIESPVSFLALHNQIR 558
Query: 431 -----------EQKRDD----SAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSA 475
+Q +D+ S++D++++ + +K + +L A ++C T +G
Sbjct: 559 NMEQNSDLKKLQQLKDETGELSSSDEKRYRSLKKQAER---ELLEAADVICCTCVGAGDP 615
Query: 476 LLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYG 535
L ++ F ++IDE+ Q+ EP +VP+ G KQ+ LVGD QL V+ A G
Sbjct: 616 RLQRIK--FSSILIDESMQSTEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLS 673
Query: 536 TSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCF 595
SLF+RL G L+ QYRMHPE+ FPS FY+ +L++G E+ + +
Sbjct: 674 QSLFERLVVLGIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCAEERKLKVDFPWPSP 733
Query: 596 GPFSFFDIHEGKESQPAGSG-SWINIDEVDFVLLLFHKLISMYPQLKSS---SQLAIISP 651
FF + +G+E + AGSG S++N E V K+ + + LK+ Q+ II+P
Sbjct: 734 DTPMFFLVTQGQE-EIAGSGTSYLNRTEASNV----EKITTRF--LKAGVKPDQIGIITP 786
Query: 652 YRHQVKQFQERFKETFGVESQ--KVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLAD 709
Y Q + + + S+ + ++I +VD QGREKD+ I SCVR+++ + IGFL D
Sbjct: 787 YEGQRAYLVQYMQYQGSLHSKLYQEIEIASVDAFQGREKDIIIMSCVRSNEHQGIGFLND 846
Query: 710 YRRMNVGITRAKSSILVVGCASTLREDKHWNNLV 743
RR+NV +TRAK I++VG L + + WN+L+
Sbjct: 847 PRRLNVALTRAKYGIIIVGNPKVLSKQQLWNHLL 880
>gi|159487559|ref|XP_001701790.1| UPF1 protein [Chlamydomonas reinhardtii]
gi|158281009|gb|EDP06765.1| UPF1 protein [Chlamydomonas reinhardtii]
Length = 800
Score = 186 bits (471), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 131/402 (32%), Positives = 202/402 (50%), Gaps = 43/402 (10%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHL----- 429
+VLV APSN A+D++ ++ TG+ K+VR+ K +V S ++HL
Sbjct: 397 QVLVAAPSNVAVDQLAHKMDQTGL----------KVVRLCAKTREAVAS-PVEHLTLHYQ 445
Query: 430 ------VEQKRDDSAADKQKHGATRKDRDSIRSA-------ILNEAVIVCSTLSFSGSAL 476
V + R A + G D ++S +L A +VC+T +G
Sbjct: 446 VHGCVLVGRLRKLLALRGAQGGLNASDEKELKSLRRRLEMEVLENADVVCTTCVGAGDPR 505
Query: 477 LSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGT 536
LS F V+IDE+ QA EP L+P+ G KQV LVGD QL ++ A G
Sbjct: 506 LSHFR--FQHVLIDESTQAAEPECLIPMVLGAKQVILVGDHCQLGPVIMCKKAAEAGLCQ 563
Query: 537 SLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVED--YTTRDWHEYRC 594
SLF+RL+ G L+ QYRMHP + FPS FY+ L++G+ + + D+
Sbjct: 564 SLFERLRLLGVKPIRLQVQYRMHPCLSEFPSNTFYEGTLQNGTGMGERRLAGVDFPWPNP 623
Query: 595 FGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQ-LKSSSQLAIISPYR 653
P F+ + G E A S S++N E V K+++ + Q S +Q+ +I+PY
Sbjct: 624 DKPMMFW-VQLGAEEISASSTSYLNRTEAAAV----EKVVTRFLQNGMSPAQIGVITPYE 678
Query: 654 HQVKQFQERFKETFGVESQ---KVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADY 710
Q G Q K +++++VD QGREKD+ + SCVR+++ SIGFL+D
Sbjct: 679 GQRAHVVSVMVRN-GTARQDLYKEIEVSSVDAFQGREKDIIVLSCVRSNEHSSIGFLSDP 737
Query: 711 RRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
RR+NV +TRA+ ++V+G L WN+L++ ++ CL
Sbjct: 738 RRLNVALTRARFGLVVLGNPRVLSRQPLWNSLLQYFKEHGCL 779
>gi|170053152|ref|XP_001862543.1| nonsense-mediated mRNA decay protein 1 [Culex quinquefasciatus]
gi|167873798|gb|EDS37181.1| nonsense-mediated mRNA decay protein 1 [Culex quinquefasciatus]
Length = 1136
Score = 186 bits (471), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 126/394 (31%), Positives = 212/394 (53%), Gaps = 48/394 (12%)
Query: 376 VLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNS----VAIDHLV- 430
+LVCAPSN+A+D++ ++ T + K+VR+ K+ +++S +A+ + +
Sbjct: 521 ILVCAPSNTAVDQLTEKIHRTNL----------KVVRVCAKSREAIDSPVSFLALHNQIR 570
Query: 431 -----------EQKRDD----SAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSA 475
+Q +D+ S++D++++ +K + +L A ++C T +G
Sbjct: 571 NMEQNSDLKKLQQLKDETGELSSSDEKRYRMLKKQAER---ELLEAADVICCTCVGAGDP 627
Query: 476 LLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYG 535
L ++ F ++IDE+ Q+ EP +VP+ G KQ+ LVGD QL V+ A G
Sbjct: 628 RLQRIK--FSSILIDESMQSTEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLS 685
Query: 536 TSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCF 595
SLF+RL G L+ QYRMHPE+ FPS FY+ +L++G E+ + +
Sbjct: 686 QSLFERLVVLGIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCAEERKLKVDFPWPSP 745
Query: 596 GPFSFFDIHEGKESQPAGSG-SWINIDEVDFVLLLFHKLISMYPQLKSS---SQLAIISP 651
FF + +G+E + AGSG S++N E V K+ + + LK+ Q+ II+P
Sbjct: 746 DTPMFFLVTQGQE-EIAGSGTSYLNRTEASNV----EKITTRF--LKAGVKPEQIGIITP 798
Query: 652 YRHQVKQFQERFKETFGVESQ--KVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLAD 709
Y Q + + + S+ + ++I +VD QGREKD+ I SCVR+++ + IGFL D
Sbjct: 799 YEGQRAYLVQYMQYQGSLHSKLYQEIEIASVDAFQGREKDIIIMSCVRSNEHQGIGFLND 858
Query: 710 YRRMNVGITRAKSSILVVGCASTLREDKHWNNLV 743
RR+NV +TRAK I++VG L + + WN+L+
Sbjct: 859 PRRLNVALTRAKYGIIIVGNPKVLSKQQLWNHLL 892
>gi|308505126|ref|XP_003114746.1| CRE-SMG-2 protein [Caenorhabditis remanei]
gi|308258928|gb|EFP02881.1| CRE-SMG-2 protein [Caenorhabditis remanei]
Length = 1067
Score = 186 bits (471), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 139/414 (33%), Positives = 199/414 (48%), Gaps = 53/414 (12%)
Query: 376 VLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAH-HSVNSVAIDHLVEQKR 434
VLVC+PSN A+D + ++ TG+ K+VR+ ++ H+ +V L Q +
Sbjct: 486 VLVCSPSNIAVDHLAEKIHKTGL----------KVVRLCARSREHTETTVPYLTLQHQMK 535
Query: 435 DDSAADKQKHGATRKDRDSIRSA---------------ILNEAVIVCSTLSFSGSALLSK 479
+ QK +++ + S +L A ++C T S + A L+K
Sbjct: 536 VMGGPELQKLIQLKEEIGELESKDDSRFLQLKRVKEHELLAAADVICCTCSSAADARLTK 595
Query: 480 LNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLF 539
+ V+IDE+ QA EP LV + G +Q+ LVGD QL VI A G SLF
Sbjct: 596 IRT--RTVLIDESTQATEPEILVSIVRGVRQLVLVGDHCQLGPVVICKKAAMAGLSQSLF 653
Query: 540 KRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDG-----------------SDVE 582
+RL G L+ QYRMHP + FPS FYD +L++G +D
Sbjct: 654 ERLVLLGIRPFRLQVQYRMHPVLSEFPSNAFYDGSLQNGVTESELELFFVYLRPIFADDR 713
Query: 583 DYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKS 642
DWH P +FF G E + S++N E V L KLI Q
Sbjct: 714 QMKGVDWHWPTPNKP-AFFWHCSGAEELSSSGTSFLNRTEAANVEKLVSKLIKGGVQ--- 769
Query: 643 SSQLAIISPYRHQVKQFQERFKETFGVESQKV---VDITTVDGCQGREKDVAIFSCVRAS 699
+Q+ +I+PY Q + F + T G + K+ V+I +VD QGREKD I +CVR++
Sbjct: 770 PNQIGVITPYEGQ-RSFIVNYMHTQGTLNSKLYESVEIASVDAFQGREKDYIIVTCVRSN 828
Query: 700 DKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLF 753
D IGFL D RR+NV ITRAK I+VVG A L + W L+ +K+D L+
Sbjct: 829 DILGIGFLNDPRRLNVAITRAKYGIVVVGNAKVLARHELWYELINHYKKKDMLY 882
>gi|344301641|gb|EGW31946.1| ATP-dependent helicase NAM7 [Spathaspora passalidarum NRRL Y-27907]
Length = 1000
Score = 186 bits (471), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 140/427 (32%), Positives = 212/427 (49%), Gaps = 50/427 (11%)
Query: 355 PTTGNELKPEVV--NSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + + + S+ + ++LVCAPSN A+D + +L G+ K+VR
Sbjct: 464 PGTGKTVTSATIIYHLSKLNKEKILVCAPSNVAVDHLAEKLDLLGL----------KVVR 513
Query: 413 IGLKAHHSVNSVAIDHLVEQKRDDSAAD---------KQKHGAT---------RKDRDSI 454
+ K+ V+S ++ HL + A K + G R R+S
Sbjct: 514 LTAKSREDVDS-SVSHLALHNLVNKGAKGEFKKLIKLKNEVGELSVEDSRIYFRNLRNS- 571
Query: 455 RSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLV 514
S +L++ IVC T + LS+ F V+IDE+ QA EP L+P+ G KQV LV
Sbjct: 572 ESKLLDKCDIVCCTCVGAADKRLSQFK--FRTVLIDESTQASEPEVLIPIVKGAKQVILV 629
Query: 515 GDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEA 574
GD QL ++ A G SLF+RL G+ L+ QYRMHP + FPS FY+ +
Sbjct: 630 GDHQQLGPVILDRKAADAGLKQSLFERLVFLGHVPIRLEVQYRMHPCLSDFPSNMFYEGS 689
Query: 575 LEDGSDVEDYTTRD----WHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
L++G +D D W P F+ + G+E + S++N E +
Sbjct: 690 LQNGVTSDDRLIEDATFPWPMVDT--PMMFW-ANYGREELSSSGNSFLNRVEA----MNV 742
Query: 631 HKLIS-MYPQLKSSSQLAIISPYRHQ---VKQFQERFKETFGVESQKV-VDITTVDGCQG 685
K+I+ ++ + Q+ +I+PY Q + QF Q + V+IT+VD QG
Sbjct: 743 EKIITRLFKDGVTPDQIGVITPYEGQRAYLVQFMSMNSTLLDKRDQYLDVEITSVDAFQG 802
Query: 686 REKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKS 745
REKD I SCVRA+D +SIGFL+D RR+NV +TRAK ++V+G L ++ WN L+
Sbjct: 803 REKDFIILSCVRANDAQSIGFLSDPRRLNVALTRAKYGLIVLGNPRALCRNRLWNCLLVH 862
Query: 746 AEKQDCL 752
++ CL
Sbjct: 863 FREKGCL 869
>gi|222629425|gb|EEE61557.1| hypothetical protein OsJ_15904 [Oryza sativa Japonica Group]
Length = 822
Score = 186 bits (471), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 101/278 (36%), Positives = 156/278 (56%), Gaps = 5/278 (1%)
Query: 484 FDVVIIDEAAQAVEPATLVPLAT-GCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRL 542
+++++DEAAQ E TL+P+ G KQ +GD QLPA V S ++++ +G S+F+RL
Sbjct: 503 LELLVVDEAAQLKECETLIPMQLPGIKQAVFIGDECQLPALVKSKISDNADFGRSVFERL 562
Query: 543 QRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDV--EDYTTRDWHEYRCFGPFSF 600
GY +L QYRM PE+ FP FYD + DG +V ++Y R+ + FGP+SF
Sbjct: 563 SSLGYNKHLLNIQYRMRPEISKFPVASFYDGKISDGPNVVSKNYK-RNILPGKMFGPYSF 621
Query: 601 FDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQ 660
++ G E+ S N EV VL + +L L S + ++SPY QV+ Q
Sbjct: 622 INVDGGHETTEKHGRSLKNTIEVAAVLWIVRRLFEESVFLGSKLTVGVVSPYNAQVRAIQ 681
Query: 661 ERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRA 720
E+ +T+ + V + +VDG QG E+DV I S VR++ S+GFL + +R N+ +TRA
Sbjct: 682 EKIGKTYDMYDDFSVKVKSVDGFQGAEEDVIIISTVRSNRAGSVGFLTNLQRTNMALTRA 741
Query: 721 KSSILVVGCASTLREDKH-WNNLVKSAEKQDCLFRVSK 757
K + +VG +TL + W +V A+ + C F S+
Sbjct: 742 KHCLWIVGNGTTLSNSRSVWQKVVNDAKHRGCFFEASE 779
>gi|50303751|ref|XP_451821.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49640953|emb|CAH02214.1| KLLA0B06435p [Kluyveromyces lactis]
Length = 969
Score = 185 bits (470), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 131/427 (30%), Positives = 221/427 (51%), Gaps = 53/427 (12%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + S+ ++ RVLVCAPSN A+D + +L + G+ K+VR
Sbjct: 430 PGTGKTVTSATIVYHLSKIHKQRVLVCAPSNVAVDHLAAKLHSMGL----------KVVR 479
Query: 413 IGLKAHH----SVNSVAIDHLVEQKRDD---------------SAADKQKHGATRKDRDS 453
+ K+ SV+ +A+ +LV + + S++D K + ++
Sbjct: 480 LTAKSREDVESSVSELALHNLVSRSAEGKLKKLLNLKEKTGELSSSDTTKFVKLVRKSEA 539
Query: 454 IRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFL 513
I+ +A ++C T +G +L++ F V+IDE+ QA EP L+P+ G KQV L
Sbjct: 540 ---TIIQKADVICCTCVGAGD---KRLDYKFRTVLIDESTQASEPECLIPIVKGAKQVVL 593
Query: 514 VGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDE 573
VGD QL ++ A G SLF+RL G+ L+ QYRM+P++ FPS FY+
Sbjct: 594 VGDHQQLGPVILDRKAGDAGLKQSLFERLISLGHIPIRLEVQYRMNPQLSEFPSNMFYEG 653
Query: 574 ALEDGSDVEDYT----TRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLL 629
+L++G +E T T W + P F+ + G+E S++N E +
Sbjct: 654 SLQNGVTIEQRTIARSTFPWPIHTI--PMMFW-ANYGREEISGNGTSYLNRIEA----MN 706
Query: 630 FHKLIS-MYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKV---VDITTVDGCQG 685
K+I+ ++ Q+ +I+PY Q + + ++ + G + + V++ +VD QG
Sbjct: 707 CEKIITRLFKDGVKPEQIGVITPYEGQ-RAYVVQYMQMNGSMEKSLYMGVEVASVDAFQG 765
Query: 686 REKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKS 745
REKD I SCVRA+++ +IGFL+D RR+NV +TRAK ++++G L + W++L+
Sbjct: 766 REKDYIILSCVRANERNTIGFLSDPRRLNVALTRAKYGLIILGNPRALSRNSLWSHLLLH 825
Query: 746 AEKQDCL 752
++ CL
Sbjct: 826 FREKGCL 832
>gi|390344703|ref|XP_786803.3| PREDICTED: regulator of nonsense transcripts 1-like
[Strongylocentrotus purpuratus]
Length = 1386
Score = 185 bits (470), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 129/402 (32%), Positives = 204/402 (50%), Gaps = 43/402 (10%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNS-VAIDHLVEQK 433
+VLVCAPSN A+D++ ++ TG+ K+VR+ K+ +++S V+ L Q
Sbjct: 732 QVLVCAPSNIAVDQLTEKIHKTGL----------KVVRLCAKSREAIDSPVSFLSLHNQV 781
Query: 434 RD-DSAADKQKHGATRKDRDSIRS---------------AILNEAVIVCSTLSFSGSALL 477
R+ + A + QK A + + + S +L A ++C T +G
Sbjct: 782 RNMEGAEEMQKLQALKDEMGELSSNDEKRYRTLKRNCERELLQNADVICCTCVGAGDPRF 841
Query: 478 SKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTS 537
++ F V+IDE+ Q+ EP L+P G +Q+ LVGD QL V+ A + G S
Sbjct: 842 ARFR--FRAVLIDESTQSTEPECLIPAVLGSRQLVLVGDHCQLGPVVMCKKAANAGLCQS 899
Query: 538 LFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR--DWHEYRCF 595
LF+RL G L+ QYRMHP + +FPS FY+ +L++G + R D+ +
Sbjct: 900 LFERLVVLGIRPIRLQVQYRMHPSLSAFPSNIFYEGSLQNGVTAAERINRAVDFPFPQPD 959
Query: 596 GPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLI--SMYPQLKSSSQLAIISPYR 653
P FF G+E + S++N E V L + + + P+ Q+ II+PY
Sbjct: 960 KPM-FFYATTGQEEIASSGTSYLNRTEASNVEKLTTRFLRAGVKPE-----QIGIITPYE 1013
Query: 654 HQ---VKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADY 710
Q + Q+ + + V+ + V+I +VD QGREKD I SCVRA+D + IGFL D
Sbjct: 1014 GQRAFIVQYMQ-YSGPLNVKLYQEVEIASVDAFQGREKDYIILSCVRANDHQGIGFLNDP 1072
Query: 711 RRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
RR+NV +TR + +++VG L WN+L+ ++Q L
Sbjct: 1073 RRLNVALTRGRYGVIIVGNPKVLSRHPLWNHLLSYYKEQKVL 1114
>gi|365763806|gb|EHN05332.1| Nam7p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 971
Score = 185 bits (470), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 134/422 (31%), Positives = 217/422 (51%), Gaps = 43/422 (10%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + S+ ++ R+LVCAPSN A+D + +L + G+ K+VR
Sbjct: 432 PGTGKTVTSATIVYHLSKIHKDRILVCAPSNVAVDHLAAKLRDLGL----------KVVR 481
Query: 413 IGLKAHH----SVNSVAIDHLVEQ----------KRDDSAADKQKHGATR--KDRDSIRS 456
+ K+ SV+++A+ +LV + K D + R K +
Sbjct: 482 LTAKSREDVESSVSNLALHNLVGRGAKGELKNLLKLKDEVGELSASDTKRFVKLVRKTEA 541
Query: 457 AILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGD 516
ILN+A +VC T +G +L+ F V+IDE+ QA P L+P+ G KQV LVGD
Sbjct: 542 EILNKADVVCCTCVGAGD---KRLDTKFRTVLIDESTQASGPECLIPIVKGAKQVILVGD 598
Query: 517 PVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALE 576
QL ++ A G SLF++L G+ L+ QYRM+P + FPS FY+ +L+
Sbjct: 599 HQQLGPVILERKAADAGLKQSLFEKLISLGHVPIRLEVQYRMNPYLSEFPSNMFYEGSLQ 658
Query: 577 DGSDVEDYTTRDWH-EYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLI- 634
+G +E T + + G F + G+E A S++N E + KL
Sbjct: 659 NGVTIEQRTVPNSKFPWPIRGIPMMFWANYGREEISANGTSFLNRIEAMNCERIITKLFR 718
Query: 635 -SMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKV---VDITTVDGCQGREKDV 690
+ P+ Q+ +I+PY Q + + ++ + G + + V++ +VD QGREKD
Sbjct: 719 DGVKPE-----QIGVITPYEGQ-RAYILQYMQMNGSLDKDLYIKVEVASVDAFQGREKDY 772
Query: 691 AIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQD 750
I SCVRA+++++IGFL D RR+NVG+TRAK ++++G +L + WN+L+ ++
Sbjct: 773 IILSCVRANEQQAIGFLRDPRRLNVGLTRAKYGLVILGNPRSLARNTLWNHLLIHFREKG 832
Query: 751 CL 752
CL
Sbjct: 833 CL 834
>gi|449443986|ref|XP_004139756.1| PREDICTED: uncharacterized protein LOC101214715 [Cucumis sativus]
gi|449521497|ref|XP_004167766.1| PREDICTED: uncharacterized LOC101214715 [Cucumis sativus]
Length = 737
Score = 185 bits (470), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 112/323 (34%), Positives = 174/323 (53%), Gaps = 21/323 (6%)
Query: 484 FDVVIIDEAAQAVEPATLVPLA-TGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRL 542
+ +++DEAAQ E + +PL K L+GD QLPA V S VA+ +G SLF+RL
Sbjct: 388 LETLVMDEAAQLKECESAIPLQFPAIKHAILIGDECQLPAMVESKVADEAKFGRSLFERL 447
Query: 543 QRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDV--EDYTTRDWHEYRCFGPFSF 600
GY +L QYRMHP + FP+ +FY + DG +V E Y + + FG +SF
Sbjct: 448 SLLGYQKHLLNVQYRMHPSISCFPNSKFYSNQISDGPNVKTEGY-VKKFLNGPMFGSYSF 506
Query: 601 FDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSS--------QLAIISPY 652
DI+EG+E + + SW N+ EVD VL + HKL Y + S++ + ++SPY
Sbjct: 507 MDINEGREEKDGITQSWKNMVEVDVVLQIIHKL---YNKGTSTTCVDSNEKISIGVVSPY 563
Query: 653 RHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRR 712
QV + + + + V +++VDG QG E+D+ I S VR++ SIGFL+ +R
Sbjct: 564 SAQVAAIEHKLGRNYNKCNSFQVRVSSVDGFQGGEEDIIIISTVRSNRSSSIGFLSSNQR 623
Query: 713 MNVGITRAKSSILVVGCASTL-REDKHWNNLVKSAEKQDCLFRVS--KPYASFFSDENLE 769
NV +TRA+ + ++G +TL + D W +LV A+ + C F K A+ S
Sbjct: 624 TNVALTRARYCLWILGNFNTLSKSDSVWEDLVFDAKNRGCFFNAKEDKDLANVMSS---C 680
Query: 770 SMRKNATTDNVQGADGHVPHDDE 792
M + D++Q + + H++E
Sbjct: 681 KMDIEESIDDLQITNLMIKHENE 703
>gi|412986744|emb|CCO15170.1| ATP-dependent helicase NAM7 [Bathycoccus prasinos]
Length = 974
Score = 185 bits (470), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 128/383 (33%), Positives = 197/383 (51%), Gaps = 38/383 (9%)
Query: 373 RVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQ 432
R VL + SN+A+D +V L G+R +VRIG +V D + Q
Sbjct: 582 RGPVLCTSDSNTAVDNLVEGLARAGVR----------VVRIG-----RTEAVRQDLAMYQ 626
Query: 433 KRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEA 492
+ KH A ++R A VC T + SGS L +++ F V++DEA
Sbjct: 627 IENMVPPGCTKHEAYEAQIRAVRYA-----QAVCCTCAGSGSDFLDRIS--FSAVMLDEA 679
Query: 493 AQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKML 552
+Q EP +LVP++ GC+Q+ LVGD QLP T++S AE G S+F RL G ML
Sbjct: 680 SQVTEPMSLVPISRGCQQLVLVGDHKQLPPTILSREAELGGLTLSMFDRLVSLGVVPYML 739
Query: 553 KTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR---DWHEYRCFGPFSFFDIHEGKES 609
TQ+RMHP + FPS FYD+ L++G+ T +W + P + H
Sbjct: 740 DTQFRMHPALGKFPSDAFYDKQLKNGTPRAMRPTPIGFNWPQPNV--PICYIPTHPTNAM 797
Query: 610 QPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGV 669
+ S S+ N E + VL +S Q + I++PY QV+ ++ + G+
Sbjct: 798 ENNDSNSYSNRAEAELVLAYLRGFLSA--QELRPKDIGIVTPYAAQVRLLRQMIRRA-GI 854
Query: 670 ES-------QKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKS 722
++ + +++++VDG QGREK++ I S VRA+ +S+GF++D RR NV +TRA+
Sbjct: 855 QTGVDRNTGECGIEVSSVDGFQGREKELMIVSTVRANTNRSLGFVSDPRRCNVTLTRARR 914
Query: 723 SILVVGCASTLRED-KHWNNLVK 744
++V+G +TLR D K W V+
Sbjct: 915 GLVVIGHENTLRCDRKVWGPYVQ 937
>gi|297603234|ref|NP_001053657.2| Os04g0582000 [Oryza sativa Japonica Group]
gi|38346797|emb|CAD41365.2| OSJNBa0088A01.4 [Oryza sativa Japonica Group]
gi|255675717|dbj|BAF15571.2| Os04g0582000 [Oryza sativa Japonica Group]
Length = 813
Score = 185 bits (470), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 101/278 (36%), Positives = 156/278 (56%), Gaps = 5/278 (1%)
Query: 484 FDVVIIDEAAQAVEPATLVPLAT-GCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRL 542
+++++DEAAQ E TL+P+ G KQ +GD QLPA V S ++++ +G S+F+RL
Sbjct: 494 LELLVVDEAAQLKECETLIPMQLPGIKQAVFIGDECQLPALVKSKISDNADFGRSVFERL 553
Query: 543 QRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDV--EDYTTRDWHEYRCFGPFSF 600
GY +L QYRM PE+ FP FYD + DG +V ++Y R+ + FGP+SF
Sbjct: 554 SSLGYNKHLLNIQYRMRPEISKFPVASFYDGKISDGPNVVSKNYK-RNILPGKMFGPYSF 612
Query: 601 FDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQ 660
++ G E+ S N EV VL + +L L S + ++SPY QV+ Q
Sbjct: 613 INVDGGHETTEKHGRSLKNTIEVAAVLWIVRRLFEESVFLGSKLTVGVVSPYNAQVRAIQ 672
Query: 661 ERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRA 720
E+ +T+ + V + +VDG QG E+DV I S VR++ S+GFL + +R N+ +TRA
Sbjct: 673 EKIGKTYDMYDDFSVKVKSVDGFQGAEEDVIIISTVRSNRAGSVGFLTNLQRTNMALTRA 732
Query: 721 KSSILVVGCASTLREDKH-WNNLVKSAEKQDCLFRVSK 757
K + +VG +TL + W +V A+ + C F S+
Sbjct: 733 KHCLWIVGNGTTLSNSRSVWQKVVNDAKHRGCFFEASE 770
>gi|449664168|ref|XP_002168656.2| PREDICTED: uncharacterized protein LOC100204258 [Hydra
magnipapillata]
Length = 3199
Score = 185 bits (470), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 114/337 (33%), Positives = 184/337 (54%), Gaps = 26/337 (7%)
Query: 433 KRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGS-----ALLSKLNHGFDVV 487
KR+ + G ++ +++ ++L A I+CSTLS +GS A F V
Sbjct: 1372 KRNSLSEKGDDQGLYSEEEHNLQRSLLLRADIICSTLSGAGSKPMVDAFRRSREIPFRCV 1431
Query: 488 IIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQR--- 544
IIDEA Q EP L+PL G ++ LVGDP QLPATVIS A G SLF+RL +
Sbjct: 1432 IIDEAGQCTEPDALIPLQYGSSKLVLVGDPAQLPATVISQRAGRFNLGQSLFERLYKGII 1491
Query: 545 ----AGY-PVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFS 599
AG P +L QYRM PE+ FP++ FY+ L+ + + P+
Sbjct: 1492 INSEAGVRPAILLNYQYRMAPEICWFPNKRFYNNELKSNEALIKKKSD-------LKPYV 1544
Query: 600 FFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQF 659
F ++ E +E + G N E + ++ + K+++ + + +++A+I+PYR+Q
Sbjct: 1545 FLNLDESREDK-TRMGGIHNPVEREHIIAICEKIVT--EKNANVNEIAVITPYRYQASLI 1601
Query: 660 QERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASD-KKSIGFLADYRRMNVGIT 718
++ + + +++ T+DG QGREK + IFSCVRAS+ ++SIGFL++ +RMNV +T
Sbjct: 1602 KQELNKKLA--QLEGIEVDTIDGFQGREKRIVIFSCVRASNHQESIGFLSNPQRMNVALT 1659
Query: 719 RAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRV 755
RAK ++++ +++ D+ W LV A+ + LF V
Sbjct: 1660 RAKDVLIILANCNSIEIDEDWKALVDDAKSRGLLFTV 1696
Score = 40.0 bits (92), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 47/77 (61%), Gaps = 12/77 (15%)
Query: 368 SSRRYRVRVLVCAPSNSALDEIVLRLLNT-GIRDENIRSYTPK--------IVRIGLKAH 418
SS + R+L CAPSN+A+DEIV RL+ + RD+N S+ K IVR+G K
Sbjct: 1231 SSNQKSQRILFCAPSNAAVDEIVRRLVQSPPYRDDN-DSHAIKHGNCGDFNIVRVGQKTQ 1289
Query: 419 HSVNSV--AIDHLVEQK 433
S + V ++++L+E++
Sbjct: 1290 VSSDLVQYSLEYLLERE 1306
>gi|358055738|dbj|GAA98083.1| hypothetical protein E5Q_04765 [Mixia osmundae IAM 14324]
Length = 1047
Score = 185 bits (469), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 140/464 (30%), Positives = 227/464 (48%), Gaps = 59/464 (12%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQKR 434
+VLV APSN A+D++ ++ TG+ K+VRI K+ ++ S +I HL ++
Sbjct: 504 QVLVTAPSNVAVDQLTEKIHTTGL----------KVVRITAKSREALES-SISHLTLHEQ 552
Query: 435 ---DDSAADKQKHGATRKDRDSIRSA---------------ILNEAVIVCSTLSFSGSAL 476
+D+ + QK + ++ + S+ IL A ++C T G
Sbjct: 553 VANNDTHVELQKLIQLKTEQGELSSSDERKFKSLTRACEREILTNADVICCTCVGCGDPR 612
Query: 477 LSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGT 536
LSK+ F V+IDEA QA EP ++PL G KQ+ +VGD QL T++S A G
Sbjct: 613 LSKIK--FRTVLIDEATQATEPECMIPLTFGVKQLVMVGDHSQLGPTIMSKKAARAGLTQ 670
Query: 537 SLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR--DWHEYRC 594
SLF+RL G L+ QYRMHP + FPS FY+ +L++G + + D+ +
Sbjct: 671 SLFERLVLLGNRPIRLQVQYRMHPCLSEFPSNMFYEGSLQNGVTAPERIKKNVDFPWPQP 730
Query: 595 FGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLI--SMYPQLKSSSQLAIISPY 652
P +F + G+E + S++N E V + +L + P Q+ I++PY
Sbjct: 731 TTPM-YFHQNLGQEEISSSGTSFLNRTEAANVEKVVTRLFKSGVMPH-----QIGIVTPY 784
Query: 653 RHQVKQFQER--FKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADY 710
Q F + E K +++ +VD QGREKD + SCVR+++ + IGFL D
Sbjct: 785 EGQRAYIANYMLFNGSLKKELYKDIEVASVDAFQGREKDYILLSCVRSNEHQGIGFLNDP 844
Query: 711 RRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDC------------LFRVSKP 758
RR+NV +TRAK ++++G L + W+ L+ +++ C L ++SKP
Sbjct: 845 RRLNVALTRAKYGLVILGNPKVLSKHALWHYLLTHYKEKGCLVEGPLSNLQPSLIQLSKP 904
Query: 759 YASFFSDEN---LESMRKNATTDNV-QGADGHVPHDDETMHYAN 798
+ E E+ ++A DN+ + G+ P E +AN
Sbjct: 905 RRPYNRSETANRFEATIQDAAHDNLPEAVRGNTPARFEPGFFAN 948
>gi|320580629|gb|EFW94851.1| ATP-dependent helicase NAM7 [Ogataea parapolymorpha DL-1]
Length = 909
Score = 185 bits (469), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 136/426 (31%), Positives = 217/426 (50%), Gaps = 49/426 (11%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V ++ ++ ++LVCAPSN A+D + +L G+R ++R
Sbjct: 390 PGTGKTVTSATIVYQLTKLHKGQILVCAPSNIAVDHLASKLEQLGLR----------VLR 439
Query: 413 IGLKAHHSVNSVAIDHL--VEQKRDDSAAD-------KQKHG----ATRKDRDSI----R 455
+ K+ V S ++ HL EQ R ++ D K+K+G + K S+
Sbjct: 440 LIAKSREDVES-SVQHLSLTEQMRKHASKDLKRLLALKEKNGELSASQYKQMASLLYKEE 498
Query: 456 SAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVG 515
+ ++++ ++C T +G L+K F V+IDE+ QA EP L+P+ G QV LVG
Sbjct: 499 ALLMDKCQVICCTCVGAGDRRLAK--RKFRTVLIDESTQASEPECLIPIVKGANQVILVG 556
Query: 516 DPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEAL 575
D QL ++S A G SLF+RL G+ L+ QYRMHP + F S FYD +L
Sbjct: 557 DHQQLGPVILSRKAGDAGLRQSLFERLIYLGHMPIRLEVQYRMHPCLSEFSSNVFYDGSL 616
Query: 576 EDGSDVEDYTTRD----WHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFH 631
++G E + D W P F+ + G+E A S++N E +
Sbjct: 617 QNGVTAESRSRPDSTFPWPIREI--PMMFWAVF-GREELSASGTSYLNRTEA----MNCE 669
Query: 632 KLIS-MYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKV----VDITTVDGCQGR 686
K+I+ + + ++ +I+PY Q F ++ E G+ + K V++ +VD QGR
Sbjct: 670 KIITRLLKEGVDPGKIGVITPYAGQAT-FIVQYMEMNGLIADKSRYSEVEVASVDSFQGR 728
Query: 687 EKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSA 746
EKD I SCVRA+D + IGFL+D RR+NV +TRA+ + ++G TL ++ WN L+
Sbjct: 729 EKDYIILSCVRANDNQLIGFLSDPRRLNVALTRARFGMAILGNPKTLSKNPMWNRLLMHF 788
Query: 747 EKQDCL 752
++ CL
Sbjct: 789 REKGCL 794
>gi|261328192|emb|CBH11169.1| nonsense mRNA reducing factor 1, putative [Trypanosoma brucei
gambiense DAL972]
Length = 842
Score = 185 bits (469), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 126/392 (32%), Positives = 186/392 (47%), Gaps = 38/392 (9%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHH----SVNSVAIDHLV 430
R+LVCAPSN A+D + R+ TG+ K+VR+ K + SV S+ ++ V
Sbjct: 417 RILVCAPSNVAVDHLAQRVSGTGL----------KVVRLQAKYRNDIPCSVESIGLERQV 466
Query: 431 EQKRDDSAA--------DKQKHGATRKDRD---------SIRSAILNEAVIVCSTLSFSG 473
+ S+ D + G + D+D I IL A +VC T +G
Sbjct: 467 RDYINASSGLERLKELLDSMQTGKSLNDKDYGTYKDGVEKIERLILRNADVVCCTCIGAG 526
Query: 474 SALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLG 533
L + F V+IDEA Q EP L+PL G KQV LVGD QL V S AE G
Sbjct: 527 DYRLKTMK--FKHVLIDEATQGTEPEVLIPLVRGAKQVILVGDHCQLRPLVFSTAAEKAG 584
Query: 534 YGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYR 593
Y SLF+RL G+ L QYRM+P + FPS +Y+ L++G E + +
Sbjct: 585 YQRSLFERLVLMGHRPVRLDVQYRMNPSLSFFPSHHYYEGTLQNGVTAEQRDASEVFPWP 644
Query: 594 CFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYR 653
FF G E + S++N E + KLI + + +I+PYR
Sbjct: 645 DVTKPIFFYNATGNEELGSNGRSYLNRAEAALTEQIVTKLIQGGVE---PGDIGVITPYR 701
Query: 654 HQVKQFQERFKET--FGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYR 711
Q + + + +E V+I++VD QGREK+ I SCVR++ ++ GF+ D R
Sbjct: 702 SQCRYLRSYLSRSGRLPMEVYDRVEISSVDAFQGREKEFIILSCVRSNHRQGAGFVTDGR 761
Query: 712 RMNVGITRAKSSILVVGCASTLREDKHWNNLV 743
R+NV +TRAK ++++G W+ L+
Sbjct: 762 RLNVSLTRAKRGLIIMGNVQLFSRYPGWHELL 793
>gi|440900094|gb|ELR51302.1| Putative helicase senataxin [Bos grunniens mutus]
Length = 2690
Score = 185 bits (469), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 213/802 (26%), Positives = 341/802 (42%), Gaps = 152/802 (18%)
Query: 52 REVKDTYKDVDDYLATFEPLL----FEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGFH 107
R V ++D DY F PL+ FE V + I ++E+ + LR G+ +
Sbjct: 1721 RRVPIRFQDCGDYFNVFFPLMVLNTFETVAQEWISSPNKEKFHQLHLRKFP--GDYKKYW 1778
Query: 108 LPSVTYEADEV-ESISP--NDLLLLSKEEFKEGSTFPTTYAFALVEHCQANLLRLRMYLA 164
V E E+ + + P NDL+ L E E L + C+ + +
Sbjct: 1779 EFVVYLEECELAKQLHPRENDLVFLVPERLNEEKK--DLEWSHLEDACEYYCGYVHKFRR 1836
Query: 165 GEVIHINK----DAVKSQRLLNIH------SLITSSVSAVEKRLFSLKICSLSTIAREYL 214
V+H K ++++Q L ++ + SS+ +++L ++ + S R L
Sbjct: 1837 TSVMHNGKFECSVSIQTQDNLPVNLNELVKCFVISSLVTTQRKLKAMSLLS----GRNQL 1892
Query: 215 ALRSVGSLPF----KDLILSASEKSSGSQDQSWKIPGLLHEYIKENHNASQLEAIHEGLL 270
A + P KDL + SE+ + Y+K+ N Q +AI
Sbjct: 1893 ARAILNPNPMDFCTKDLPTATSER--------------IVAYLKD-FNEDQKKAIETACA 1937
Query: 271 R-------KAFVLIQGPPGTGKTQTILGLLSAILHATPARVHS-KGGLREIKRGPEL--- 319
LI GPPGTGK++TI+G+L +L R +S + +IK+ L
Sbjct: 1938 MVKHSPSVAKICLIHGPPGTGKSKTIVGILYRLLTENQRRGYSDENSNAKIKQNRVLVCA 1997
Query: 320 PMHEKYNHWGRASPWLVGANPRDNIMPID--GDDGFF-----PTTGNELKPEVVNSSRRY 372
P + + + +D P+ GD + NE+ ++S +
Sbjct: 1998 PSNAAVDELMKKIILEFKEKCKDKKNPMGNCGDINLVRLGPEKSINNEVLKFSLDSQVNH 2057
Query: 373 RVRVLVCAPS------------NSALDEIV-LRLLNTGIRDENIRSYTPKIVRIGLKAHH 419
R++ + PS + LDE+ R L G R+ + KI R+
Sbjct: 2058 RMKKDL--PSHVQEMHKRKEFLDRQLDELSRQRALCRGGRESQRQELDGKIARVS----- 2110
Query: 420 SVNSVAIDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSK 479
+++++ ++ K+ G +K + I IL +I C TLS SG LL
Sbjct: 2111 -----------KERQELASKIKEVQGRPQKTQSII---ILESHIICC-TLSTSGGLLLEA 2155
Query: 480 LNHG-----FDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGY 534
G F VI+DEA Q+ E TL PL C ++ LVGDP QLP TVIS A+ GY
Sbjct: 2156 AFRGQGGVPFSCVIVDEAGQSCEVETLTPLIHRCNKLVLVGDPKQLPPTVISVKAQDYGY 2215
Query: 535 GTSLFKRLQR-----------AGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVE- 582
S+ R + PV L QYRMHP++ FPS YD L E
Sbjct: 2216 DQSMMARFHKLLEESVEHNMIGRLPVLQLTIQYRMHPDICLFPSSYIYDGILRTNRGTET 2275
Query: 583 DYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKS 642
+ DW F P+ FD+ +G E + + S++N+ E+ V+ L KLI + +
Sbjct: 2276 SRCSSDWP----FQPYLVFDVGDGLERR--DNDSYVNVQEIKLVMELI-KLIKDKRRDVT 2328
Query: 643 SSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRA-SDK 701
+ II+ Y+ Q Q+ + F + + ++ TVD QGR+KD I +CVRA + +
Sbjct: 2329 FRNIGIITHYKAQKTMIQKDLDKEF--DRKGAAEVDTVDAFQGRQKDCVIVTCVRANATQ 2386
Query: 702 KSIGFLADYRRMNVGITRAKSSILVVGCAST----------------------------L 733
SIGFLA +R+NV ITRAK S+ ++G T L
Sbjct: 2387 GSIGFLASLQRLNVTITRAKYSLFILGHLRTLVVAFRGSVFVPKHVSVFWGCNFLPSLCL 2446
Query: 734 REDKHWNNLVKSAEKQDCLFRV 755
+E++HW +L++ A+K+ + +
Sbjct: 2447 KENRHWYHLIQDAQKRGAIIKT 2468
>gi|189234959|ref|XP_973320.2| PREDICTED: similar to nonsense-mediated mrna decay protein 1
(rent1) [Tribolium castaneum]
Length = 1090
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 134/403 (33%), Positives = 211/403 (52%), Gaps = 47/403 (11%)
Query: 376 VLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNS-VAIDHLVEQKR 434
VLVCAPSN+A+D++ ++ T + K+VR+ K+ +++S V+ L Q R
Sbjct: 488 VLVCAPSNTAVDQLTEKIHKTNL----------KVVRLCAKSREAIDSPVSFLALHNQIR 537
Query: 435 DDSAADKQKHGATRKDRDSIRSAI----------------LNEAVIVCSTLSFSGSALLS 478
A + + KD S++ L A ++C T +G L
Sbjct: 538 KMEANTELQKLQQLKDETGELSSVDEKRYRMLKKLAEKELLEAADVICCTCVGAGDPRLV 597
Query: 479 KLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSL 538
+L F ++IDE+ QA EP +VP+ G KQ+ LVGD QL V+ A G SL
Sbjct: 598 RLK--FHSILIDESMQATEPECMVPVVLGVKQLILVGDHCQLGPVVMCKKAARAGLSQSL 655
Query: 539 FKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDG--SDVEDYTTRDWHEYRCFG 596
F+RL G L+ QYRMHPE+ FPS FY+ +L++G +D D+
Sbjct: 656 FERLVVLGIRPFRLEVQYRMHPELSRFPSNFFYEGSLQNGVCADERKLNKIDFPWPVIDR 715
Query: 597 PFSFFDIHEGKESQPAGSG-SWINIDEVDFVLLLFHKLISMYPQLKSS---SQLAIISPY 652
P FF + +G+E + AGSG S++N E V K+ + + L+S Q+ +I+PY
Sbjct: 716 PM-FFHVTQGQE-EIAGSGTSYLNRTEAANV----EKIATRF--LRSGVKPEQIGVITPY 767
Query: 653 RHQ---VKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLAD 709
Q + Q+ + ++ + ++ + ++I +VD QGREKD+ I SCVR+++ + IGFL D
Sbjct: 768 EGQRAYLVQYMQ-YQGSLHSKTYQEIEIASVDAFQGREKDIIIMSCVRSNEHQGIGFLND 826
Query: 710 YRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
RR+NV +TRAK I++VG L + WN+L+ ++Q L
Sbjct: 827 PRRLNVALTRAKYGIIIVGNPKVLSKQPLWNHLLSFYKEQKVL 869
>gi|323507767|emb|CBQ67638.1| probable NAM7-nonsense-mediated mRNA decay protein [Sporisorium
reilianum SRZ2]
Length = 1094
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 131/403 (32%), Positives = 206/403 (51%), Gaps = 47/403 (11%)
Query: 376 VLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNS-VAIDHLVEQ-K 433
VLVCAPSN A+D++ ++ TG+ K+VR+ K+ +++S ++ L EQ
Sbjct: 525 VLVCAPSNVAVDQLTEKIHMTGL----------KVVRLTAKSREALDSPISFLTLHEQVA 574
Query: 434 RDDSAADKQK------------HGATRKDRDSIRSA---ILNEAVIVCSTLSFSGSALLS 478
+D+ + QK RK + IR+ IL+ A ++C T G L+
Sbjct: 575 NNDTNIELQKLIQLKNEQGELSSSDERKCKALIRACEKEILSTADVICCTCVGCGDPRLA 634
Query: 479 KLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSL 538
K+ F V++DEA QA EP ++PL GCKQV VGD +QL +++ G SL
Sbjct: 635 KIK--FRTVLVDEATQAAEPECMIPLVMGCKQVVFVGDHLQLGPVIMNKKVARAGASQSL 692
Query: 539 FKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRD----WHEYRC 594
F+RL G L+ QYRMHP + FPS FY+ L++G + +D W
Sbjct: 693 FERLIMLGNRPIRLQVQYRMHPCLSEFPSNMFYEGTLQNGVTAPERLRKDVDFPWPVPSL 752
Query: 595 FGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLK-SSSQLAIISPYR 653
P FF + G+E + S++N E V K+++ + + SQ+ I++PY
Sbjct: 753 --PMLFFQ-NLGQEEISSSGTSFLNRTEASNV----EKIVTRFFKAGVKPSQIGIVTPYE 805
Query: 654 HQ----VKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLAD 709
Q V Q + E K V++ +VD QGREKD I SCVR+++ + IGFL+D
Sbjct: 806 GQRSYIVNHMQ--LHGSLKKELYKEVEVASVDAFQGREKDYIILSCVRSNEHQGIGFLSD 863
Query: 710 YRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
RR+NV +TRA+ ++++G L + W+ L+ +++ CL
Sbjct: 864 PRRLNVALTRARYGLVILGNPKVLNKHPLWHYLLVHYKEKGCL 906
>gi|351697288|gb|EHB00207.1| Putative helicase senataxin [Heterocephalus glaber]
Length = 2691
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 145/478 (30%), Positives = 216/478 (45%), Gaps = 106/478 (22%)
Query: 375 RVLVCAPSNSALDEIVLRLL---------------NTG----IRDENIRSYTPKIVRIGL 415
RVLVCAPSN+A+DE++ +++ N G +R +S ++++ L
Sbjct: 1997 RVLVCAPSNAAVDELMKKIIIEFKEKCKDKRNPLGNCGDINLVRLGPEKSINSEVLKFSL 2056
Query: 416 --KAHHSVNSVAIDHLVEQKRDDSAADKQ------------------------KHGATRK 449
+ +H + H+ E R D Q K K
Sbjct: 2057 DSQVNHRMKKDLPSHVQEMHRRKEFLDHQLDELSRQRALCRGGRAMQRQELDEKIAKVSK 2116
Query: 450 DRDSI--------------RSAILNEAVIVCSTLSFSGSALLSKLNHG-----FDVVIID 490
+R + +S ++ E+ I+C TLS SG LL G F VI+D
Sbjct: 2117 ERQELASKIKEVQGRPQKAQSTVILESHIICCTLSTSGGLLLESAFRGQGGVPFSCVIVD 2176
Query: 491 EAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQR------ 544
EA Q+ E TL PL C ++ LVGDP QLP TVIS A+ GY S+ R R
Sbjct: 2177 EAGQSCEVETLTPLIHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMARFCRLLEERV 2236
Query: 545 -----AGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDY-TTRDWHEYRCFGPF 598
PV L QYRMHP++ FPS Y+ +L+ E + DW F P+
Sbjct: 2237 EQNTIGRLPVLQLTVQYRMHPDICLFPSNYIYNRSLKTHRFTESVRCSSDWP----FQPY 2292
Query: 599 SFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQ 658
FD+ +G E + + S++N E+ V+ + KLI + + + II+ Y+ Q
Sbjct: 2293 LVFDVGDGSERR--DNDSYVNGQEIKLVMEII-KLIKEKKREINFRNIGIITHYKAQKIM 2349
Query: 659 FQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKK-SIGFLADYRRMNVGI 717
Q+ + F + VD TVD QGR+KD I +CVRA+ + SIGFLA +R+NV I
Sbjct: 2350 IQKDLDKEFDRKGPAEVD--TVDAFQGRQKDCIIVTCVRANAMQGSIGFLASLQRLNVTI 2407
Query: 718 TRAKSSILVVGCASTL--------------------REDKHWNNLVKSAEKQDCLFRV 755
TRAK S+ ++G TL +E+ HWN L++ A+K+ + +
Sbjct: 2408 TRAKYSLFILGHLRTLMVGIMFLRCVIVSSFSSLCFKENHHWNELIQDAQKRGAIIKT 2465
>gi|297841151|ref|XP_002888457.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297334298|gb|EFH64716.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 1058
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 111/297 (37%), Positives = 165/297 (55%), Gaps = 10/297 (3%)
Query: 460 NEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLAT-GCKQVFLVGDPV 518
N ++ C+ S SA L ++ +++IDEAAQ E + +PL G + L+GD
Sbjct: 540 NAYLLFCTA---SSSAKL-HMSSPIQLLVIDEAAQLKECESAIPLQLPGLQHAILIGDEK 595
Query: 519 QLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDG 578
QLPA + S +A G SLF+RL G+ ++L QYRMHP + FP+REFYD + D
Sbjct: 596 QLPAMIKSKIASEADLGRSLFERLVLLGHNKQLLNMQYRMHPSISIFPNREFYDMKILDA 655
Query: 579 SDVE--DYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISM 636
V Y + E + FGP+SF +I G+E G S N+ EV V + KL S+
Sbjct: 656 PSVRLRSYEKKFLPE-KMFGPYSFINIAYGREQFGEGYSS-KNVVEVSVVAEIVSKLYSV 713
Query: 637 YPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCV 696
+ S + +ISPY+ QV QER E + E V + +VDG QG E+D+ I S V
Sbjct: 714 SRKTGRSISVGVISPYKAQVFAIQERIGEMYNTEGTFTVSVRSVDGFQGGEEDIIIISTV 773
Query: 697 RASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKH-WNNLVKSAEKQDCL 752
R++ K +IGFL++ +R NV +TRA+ + ++G +TL +K W LV A+ ++C
Sbjct: 774 RSNGKGAIGFLSNQQRTNVALTRARYCLWILGNEATLTNNKSVWRQLVVDAQARNCF 830
>gi|270001378|gb|EEZ97825.1| hypothetical protein TcasGA2_TC000192 [Tribolium castaneum]
Length = 1095
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 133/402 (33%), Positives = 209/402 (51%), Gaps = 45/402 (11%)
Query: 376 VLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNS-VAIDHLVEQKR 434
VLVCAPSN+A+D++ ++ T + K+VR+ K+ +++S V+ L Q R
Sbjct: 493 VLVCAPSNTAVDQLTEKIHKTNL----------KVVRLCAKSREAIDSPVSFLALHNQIR 542
Query: 435 DDSAADKQKHGATRKDRDSIRSAI----------------LNEAVIVCSTLSFSGSALLS 478
A + + KD S++ L A ++C T +G L
Sbjct: 543 KMEANTELQKLQQLKDETGELSSVDEKRYRMLKKLAEKELLEAADVICCTCVGAGDPRLV 602
Query: 479 KLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSL 538
+L F ++IDE+ QA EP +VP+ G KQ+ LVGD QL V+ A G SL
Sbjct: 603 RLK--FHSILIDESMQATEPECMVPVVLGVKQLILVGDHCQLGPVVMCKKAARAGLSQSL 660
Query: 539 FKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDG--SDVEDYTTRDWHEYRCFG 596
F+RL G L+ QYRMHPE+ FPS FY+ +L++G +D D+
Sbjct: 661 FERLVVLGIRPFRLEVQYRMHPELSRFPSNFFYEGSLQNGVCADERKLNKIDFPWPVIDR 720
Query: 597 PFSFFDIHEGKESQPAGSG-SWINIDEVDFVLLLFHKLISMYPQLKSS---SQLAIISPY 652
P FF + +G+E + AGSG S++N E V K+ + + L+S Q+ +I+PY
Sbjct: 721 PM-FFHVTQGQE-EIAGSGTSYLNRTEAANV----EKIATRF--LRSGVKPEQIGVITPY 772
Query: 653 RHQVKQFQE--RFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADY 710
Q + +++ + ++ + ++I +VD QGREKD+ I SCVR+++ + IGFL D
Sbjct: 773 EGQRAYLVQYMQYQGSLHSKTYQEIEIASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDP 832
Query: 711 RRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
RR+NV +TRAK I++VG L + WN+L+ ++Q L
Sbjct: 833 RRLNVALTRAKYGIIIVGNPKVLSKQPLWNHLLSFYKEQKVL 874
>gi|294929939|ref|XP_002779430.1| nonsense-mediated mRNA decay protein, putative [Perkinsus marinus
ATCC 50983]
gi|239888538|gb|EER11225.1| nonsense-mediated mRNA decay protein, putative [Perkinsus marinus
ATCC 50983]
Length = 923
Score = 184 bits (467), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 126/404 (31%), Positives = 209/404 (51%), Gaps = 41/404 (10%)
Query: 355 PTTGNELKPEVV--NSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRS------Y 406
P TG + + + +R+++ +VLV APSN A+D++ ++ TG++ I + Y
Sbjct: 483 PGTGKTVTSATIIYHLARQHQGQVLVTAPSNIAVDQLAEKIHLTGLKVVRILAKSRECLY 542
Query: 407 TPKIVRIGLKAHHSVNSVAIDHLVEQKR---------DDSAADKQKHGATRKDRDSIRSA 457
+P L H + ++ E K+ + +++D+++ R R +
Sbjct: 543 SPVEF---LSLHTQIRNMRTPQAKEFKKLFDLKEEVGELTSSDEKRF---RILRSQVERE 596
Query: 458 ILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDP 517
+L A ++C+T + +G L KL F +V++DEA QA EP L+P+ G KQV LVGD
Sbjct: 597 LLENADVICTTCAGAGDPRLGKLR--FKMVLVDEATQACEPEALIPICNGAKQVILVGDH 654
Query: 518 VQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALED 577
QL V+ A G+ SLF+RL G L+ QYRMHP + FPS+ FYD L++
Sbjct: 655 KQLGPVVMCKKAAKAGFKQSLFERLIALGVRPIRLEVQYRMHPSLAEFPSQTFYDGCLQN 714
Query: 578 GSDVEDYTTRD----WHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKL 633
G +ED W P F++ G+E A S++N E + K+
Sbjct: 715 GITMEDRQVSGVKFPWPREEM--PMFFYN-STGQEEISASGTSYLNRSEA----INIEKI 767
Query: 634 ISMYPQLK-SSSQLAIISPYRHQ---VKQFQERFKETFGVESQKVVDITTVDGCQGREKD 689
I+ + + SQ+ +++PY Q ++Q +R + T + + ++I +VD QGREKD
Sbjct: 768 ITYFLRAGLKGSQIGVVTPYEGQRAYIQQVLQR-QTTLSAKMYESIEIASVDAFQGREKD 826
Query: 690 VAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTL 733
+ SCVR++ + +GFL D RR+NV +TRA+ +++ G A L
Sbjct: 827 FIVLSCVRSNQRAGLGFLNDPRRLNVALTRARYGLVICGNAQVL 870
>gi|301092662|ref|XP_002997185.1| nonsense transcript regulator [Phytophthora infestans T30-4]
gi|262111572|gb|EEY69624.1| nonsense transcript regulator [Phytophthora infestans T30-4]
Length = 687
Score = 184 bits (467), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 137/424 (32%), Positives = 218/424 (51%), Gaps = 59/424 (13%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + S++ +VLV APSN A+D + +++ TG+R +VR
Sbjct: 125 PGTGKTVTSASIVFHMSKQNMGQVLVTAPSNIAVDHLTMKISATGLR----------VVR 174
Query: 413 IGLKAHHSVNSVAIDHL-------------------VEQKRDD----SAADKQKHGATRK 449
+ K+ +V S +++HL + Q +DD S+ D+++ + ++
Sbjct: 175 LAAKSREAVAS-SVEHLSLHAMIKSLDSPDKADLRKLMQLKDDIGELSSQDEKRFKSLKR 233
Query: 450 DRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCK 509
+ IL A ++C+T +G LS N F V+IDEA QA EP L+P+ G K
Sbjct: 234 QAER---EILQAADVICTTCVGAGDPRLS--NFRFRQVLIDEATQATEPECLIPIVQGAK 288
Query: 510 QVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGY---PVKMLKTQYRMHPEVRSFP 566
V +VGD QL V++ A G SLF RL ++ P + L+ QYRMHP + FP
Sbjct: 289 HVVMVGDHRQLGPVVMNKKAAKAGLNNSLFDRLVKSDTKHRPFR-LRVQYRMHPFLSEFP 347
Query: 567 SREFYDEALEDGSDVED--YTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVD 624
S EFY+ L++G + ++ D+ P +FF I G E + S++N E
Sbjct: 348 SNEFYEGDLQNGVAASERQLSSVDFPWPNPNKP-TFFYICLGAEEISSSGTSYLNRTEAS 406
Query: 625 FVLLLFHKLISMYPQLKSS---SQLAIISPYRHQVKQFQERFKETFGVESQ--KVVDITT 679
V K+++ + LK+ SQ+ +I+PY Q + + SQ K V++ +
Sbjct: 407 NV----EKIVTTF--LKAGVLPSQIGVITPYEGQRAYVVSYMQRNGPLRSQLYKDVEVAS 460
Query: 680 VDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHW 739
VD QGREKD+ I SCVR+++ + IGFL+D RR+NV +TRAK ++++G L + W
Sbjct: 461 VDSFQGREKDLIILSCVRSNENQGIGFLSDERRLNVALTRAKYGVILLGNPRVLAKQTLW 520
Query: 740 NNLV 743
N L+
Sbjct: 521 NKLL 524
>gi|67481561|ref|XP_656130.1| regulator of nonsense transcripts [Entamoeba histolytica HM-1:IMSS]
gi|56473310|gb|EAL50744.1| regulator of nonsense transcripts, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449704720|gb|EMD44907.1| Hypothetical protein EHI5A_012990 [Entamoeba histolytica KU27]
Length = 937
Score = 184 bits (467), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 125/382 (32%), Positives = 196/382 (51%), Gaps = 25/382 (6%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIR------------DENIRSYTPK-IVRIGLKAHHSV 421
+VLVCAPSN A+D++ ++ TG++ DE++ Y+ K ++ LK +
Sbjct: 448 KVLVCAPSNIAVDQLGTKITETGVKVIRVYSKSRETEDESLYDYSLKTLMEEKLKKDKEM 507
Query: 422 NSVAIDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLN 481
++ E K D + D +K + I ++L E ++C T + LS +
Sbjct: 508 FAL----YQEYKDDPDSLDFVSTATIQKRINQIELSLLRETDVICCTCCGALDTRLSGIL 563
Query: 482 HGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKR 541
D V+IDE+ QA EP L+ L KQ+FLVGD QL + S A+ G G +F R
Sbjct: 564 EHIDTVLIDESTQADEPECLICLNNSVKQLFLVGDHCQLGPILNSSRAKKYGLGLPMFSR 623
Query: 542 LQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDV--EDYTTRDWHEYRCFGPFS 599
L + G+ L+ QYRMHP + F S+ FYD L++G + + + ++ P
Sbjct: 624 LLQLGHEPYRLQFQYRMHPCLSEFSSQTFYDGVLQNGVTALERQFPSLKYFWFKQNKPMM 683
Query: 600 FFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQF 659
F + GKES + S+IN +E V ++ +I M S SQ+ +I+PY Q +
Sbjct: 684 FIAAN-GKESYGSNGTSYINDEE---VFIIEQIIIKMLGNKVSPSQIGVITPYIAQKQAI 739
Query: 660 QERFKETFGVESQKV--VDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGI 717
R + ++ ++I +VD QGREKD IFS VR+++ IGFL+ +R+NV I
Sbjct: 740 ISRLSLNRRISEAQLNDIEIASVDSFQGREKDFIIFSTVRSNEISDIGFLSIPQRLNVSI 799
Query: 718 TRAKSSILVVGCASTLREDKHW 739
TRAK ++VVG TL ++ W
Sbjct: 800 TRAKYGLVVVGNPETLMQNPLW 821
>gi|256810316|ref|YP_003127685.1| DNA helicase [Methanocaldococcus fervens AG86]
gi|256793516|gb|ACV24185.1| DNA helicase [Methanocaldococcus fervens AG86]
Length = 655
Score = 184 bits (467), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 172/581 (29%), Positives = 277/581 (47%), Gaps = 98/581 (16%)
Query: 219 VGSLPFKDLILSASEKSSGSQDQSWKIPGLLH-----------EYIKENHNASQLEAIHE 267
V + FK + + E + ++ I G+ H E+ ++ N SQ A+ +
Sbjct: 126 VNDITFKRMKEALREFARKRDKLAYIILGIEHPEKPLREDIELEFYDKHLNESQKLAVKK 185
Query: 268 GLLRKAFVLIQGPPGTGKTQTILGLL--------SAILHATPARVHSKGGLRE-IKRGPE 318
+L K LI GPPGTGKT+T+ ++ +L + + + L IK+ P+
Sbjct: 186 AVLSKDLYLIHGPPGTGKTRTLTEVIVQEVRFNKHKVLATADSNIAADNILEYLIKKYPD 245
Query: 319 LPMHEKYNHWGRASPWLVGANPRDNIMP--IDGDDGFFPTTGNELKPEVVNSSRRYRVRV 376
L + + H R S L+ + +P I+ + + LK E + + R +
Sbjct: 246 LKVV-RVGHPTRISKDLIQHS-----LPYLIENHEKYQEILS--LK-EKIKEIKEQRDKF 296
Query: 377 LVCAPS--NSALDEIVLRLLNT-----GIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHL 429
L +P DE +L++ G+ E I S IVR K +NS +D +
Sbjct: 297 LKPSPRWRRGMSDEQILKVAKRRKDYRGVPKEKIISMAEWIVR-NKKIKKIINS--LDEI 353
Query: 430 VEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVII 489
E+ I + IL+EA ++ +T S +GS +L FDVV+I
Sbjct: 354 TEK---------------------IMNEILSEADVIVATNSMAGSEILK--GWEFDVVVI 390
Query: 490 DEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYP- 548
DE +QA+EP+ L+P+ G K++ + GD QLP TV+S E+ +LF+RL + YP
Sbjct: 391 DEGSQAMEPSCLIPIVKG-KKLIMAGDHKQLPPTVLS---ENEELKKTLFERLIKK-YPE 445
Query: 549 -VKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFG----------P 597
+L+ QYRM+ ++ FP+R FYD L+ V++ T D + P
Sbjct: 446 FSSILEIQYRMNEKIMEFPNRMFYDNKLKADESVKNITLLDLVKEEEIDESDRDIVNEIP 505
Query: 598 FSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVK 657
FF + EG E + S S+ NI+E + VL + KLI K +I+PY QV+
Sbjct: 506 VQFFHV-EGVERKDKESPSYYNIEEAEKVLEVVKKLI------KYKIPTNVITPYDAQVR 558
Query: 658 QFQERFKETFGVESQKV-VDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVG 716
+ F E Q + V++ TVDG QGRE + + S VR K+ GFL D RR+NV
Sbjct: 559 YLRRLF------EEQNIDVEVNTVDGFQGRENEAIVISFVRT---KNFGFLKDLRRLNVA 609
Query: 717 ITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRVSK 757
ITRAK ++++G + L++DK +N ++K A+ + ++ K
Sbjct: 610 ITRAKRKLILIGNENLLKQDKVYNEMIKWAKSFESEYKKKK 650
>gi|357491661|ref|XP_003616118.1| DNA-binding protein SMUBP-2 [Medicago truncatula]
gi|355517453|gb|AES99076.1| DNA-binding protein SMUBP-2 [Medicago truncatula]
Length = 950
Score = 184 bits (467), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 106/296 (35%), Positives = 170/296 (57%), Gaps = 6/296 (2%)
Query: 460 NEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLA-TGCKQVFLVGDPV 518
N +++C+ + S L S+ + ++IDEAAQ E + +PL G K+ LVGD +
Sbjct: 612 NACLLLCT--ASSCVKLFSEGMAQVEFLVIDEAAQLKECESAIPLQLNGLKRCVLVGDEI 669
Query: 519 QLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDG 578
QLPA V S +A+ G+G SLF+RL GY ML QYRMHP + FPSREFY++ L D
Sbjct: 670 QLPAMVKSEIADRAGFGRSLFERLATLGYKKHMLNVQYRMHPSISIFPSREFYNKKLSDS 729
Query: 579 SDVEDYT-TRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMY 637
V + + + + + +G +SF +I +GKE Q S N+ E + + ++ +
Sbjct: 730 QIVREISYNKRFLGGKMYGSYSFINISKGKE-QCNHDHSLKNVIEAAAISEIIGRIQKEF 788
Query: 638 PQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVR 697
+ ++ + IISPY+ QV + QER K+ +++ +VDG QG E+D+ I S VR
Sbjct: 789 VRTRNKVSIGIISPYKAQVHEIQERVKQYMVSAPNFSINVRSVDGFQGGEEDLIIISTVR 848
Query: 698 ASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTL-REDKHWNNLVKSAEKQDCL 752
++ +GFL++ +R NV ITRA+ + +VG A+TL + W +V A++++C
Sbjct: 849 SNFGGKVGFLSNRQRTNVAITRARYCLWIVGNATTLINSNSVWRKVVMDAKQRNCF 904
>gi|72389186|ref|XP_844888.1| regulator of nonsense transcripts 1 [Trypanosoma brucei TREU927]
gi|62359996|gb|AAX80419.1| regulator of nonsense transcripts 1, putative [Trypanosoma brucei]
gi|70801422|gb|AAZ11329.1| regulator of nonsense transcripts 1, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
Length = 842
Score = 184 bits (467), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 126/392 (32%), Positives = 186/392 (47%), Gaps = 38/392 (9%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHH----SVNSVAIDHLV 430
R+LVCAPSN A+D + R+ TG+ K+VR+ K + SV S+ ++ V
Sbjct: 417 RILVCAPSNVAVDHLAQRVSGTGL----------KVVRLQAKYRNDIPCSVESIGLERQV 466
Query: 431 EQKRDDSAA--------DKQKHGATRKDRD---------SIRSAILNEAVIVCSTLSFSG 473
+ S+ D + G + D+D I IL A +VC T +G
Sbjct: 467 GDYINASSGLERLKELLDSMQTGKSLNDKDYGTYKDGVEKIERLILRNADVVCCTCIGAG 526
Query: 474 SALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLG 533
L + F V+IDEA Q EP L+PL G KQV LVGD QL V S AE G
Sbjct: 527 DYRLKTMK--FKHVLIDEATQGTEPEVLIPLVRGAKQVILVGDHCQLRPLVFSTAAEKAG 584
Query: 534 YGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYR 593
Y SLF+RL G+ L QYRM+P + FPS +Y+ L++G E + +
Sbjct: 585 YQRSLFERLVLMGHRPVRLDVQYRMNPSLSFFPSHHYYEGTLQNGVTAEQRDASEVFPWP 644
Query: 594 CFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYR 653
FF G E + S++N E + KLI + + +I+PYR
Sbjct: 645 DVTKPIFFYNATGNEELGSNGRSYLNRAEAALTEQIVTKLIQGGVE---PGDIGVITPYR 701
Query: 654 HQVKQFQERFKET--FGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYR 711
Q + + + +E V+I++VD QGREK+ I SCVR++ ++ GF+ D R
Sbjct: 702 SQCRYLRSYLSRSGRLPMEVYDRVEISSVDAFQGREKEFIILSCVRSNHRQGAGFVTDGR 761
Query: 712 RMNVGITRAKSSILVVGCASTLREDKHWNNLV 743
R+NV +TRAK ++++G W+ L+
Sbjct: 762 RLNVSLTRAKRGLIIMGNVQLFSRYPGWHELL 793
>gi|324500307|gb|ADY40148.1| Regulator of nonsense transcripts 1 [Ascaris suum]
Length = 1087
Score = 184 bits (467), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 128/411 (31%), Positives = 209/411 (50%), Gaps = 51/411 (12%)
Query: 370 RRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNS------ 423
R+ +VLVCAPSN A+D++ ++ TG+ K+VR+ K+ +++S
Sbjct: 476 RQTSGQVLVCAPSNIAVDQLAEKIHRTGL----------KVVRLCAKSRETLDSPVAFLA 525
Query: 424 ----------VAIDHLVEQKRDD----SAADKQKHGATRKDRDSIRSAILNEAVIVCSTL 469
A H ++Q +++ + AD+++ R ++ +L A ++C T
Sbjct: 526 LHNQLKAVQGAAELHKLQQLKEEIGELADADERRFRTLRMAKEK---QLLGAADVICCTC 582
Query: 470 SFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVA 529
+ LS + V+IDE+ QA EP +V + G KQ+ LVGD QL ++ A
Sbjct: 583 VSAADNRLSHMR--IKCVLIDESTQATEPEVMVAVVRGVKQLVLVGDHCQLGPVIMCKKA 640
Query: 530 EHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDG--SDVEDYTTR 587
G SLF+RL G L+ QYRMHP + +FPS FY+ L++G
Sbjct: 641 AKAGLSQSLFERLVVLGTRPIRLQVQYRMHPALSAFPSNVFYEGTLQNGVTQGERQLAGV 700
Query: 588 DWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDE---VDFVLLLFHKLISMYPQLKSSS 644
DW P F+ + +E P+G+ S++N E V+ V F K + P+
Sbjct: 701 DWQWPVPDKPMMFWSCYGQEELSPSGT-SYLNRTEAANVEKVATRFLK-AGLRPE----- 753
Query: 645 QLAIISPYRHQVKQFQERFKETFGVESQKV---VDITTVDGCQGREKDVAIFSCVRASDK 701
Q+ II+PY Q + + +F +T G K+ +++ VD QGREKD+ I +CVR+++
Sbjct: 754 QIGIITPYEGQ-RSYIVQFMQTQGALHSKLYLEMEVANVDAFQGREKDIIIVTCVRSNEH 812
Query: 702 KSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
+ IGFL D RR+NV +TRAK ++++G A L WN L+ ++++CL
Sbjct: 813 QGIGFLNDSRRLNVALTRAKYGVIIIGNAKILSRHPLWNQLLTMFKEKNCL 863
>gi|300176550|emb|CBK24215.2| unnamed protein product [Blastocystis hominis]
Length = 939
Score = 184 bits (467), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 133/397 (33%), Positives = 197/397 (49%), Gaps = 24/397 (6%)
Query: 370 RRYRVRVLVCAPSNSALDEIVLRLLNTGI--------RDENIRSYTPKIVRIGLKAHHSV 421
+ Y+ RVLVCAPSN A+D + LRL G+ E++RS + L +
Sbjct: 459 KSYKQRVLVCAPSNIAVDNLTLRLHRLGLCVVRLVARSRESVRSEVENVCLHNLAVYVGG 518
Query: 422 NSVAIDHLVEQKRDDSAADKQKHGATRKDRDSI-RSAILNEAVIVCSTLSFSGSALLSKL 480
+ + L K ++ +K A K +I IL+ A +VC T S + A L+ L
Sbjct: 519 PTSELYKL-NAKLQENGQLSEKEAALYKSYLTIAEHTILSHAEVVCCTCSAALDARLAGL 577
Query: 481 NHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFK 540
+ F V++DE+ QA EP L+P+ GC ++ LVGD QL + A+ + SLF+
Sbjct: 578 S--FPAVLVDESTQAREPECLIPIVNGCDRLILVGDHKQLGPVIQDQEAKRAEFDISLFE 635
Query: 541 RLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEY-RCFGPFS 599
RL G L QYRMHP + FPS FY+ AL++ + T + R P
Sbjct: 636 RLLSLGIKPYCLNIQYRMHPALSIFPSNMFYNGALKNAVHSSERTRNLAFPWPRSDMPMM 695
Query: 600 FFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISM-YPQLKSSSQLAIISPYRHQ--- 655
F+ + +G E + S++N E V + + I+ P ++ +I+PY Q
Sbjct: 696 FWCV-QGSEDPGSSGRSFLNRMEATCVEKVVERFINCGIP----GDRIGVITPYDSQRTL 750
Query: 656 VKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNV 715
++Q R E E K V+I +VD QGRE D IFSCVR++ +GFL D RR+NV
Sbjct: 751 LRQVLSRHMEK--AEEVKKVEIASVDEFQGRENDYIIFSCVRSNSDGVLGFLNDMRRLNV 808
Query: 716 GITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
ITRAK I+++G +TLR W L+ + CL
Sbjct: 809 AITRAKYGIVIIGNPNTLRSHPIWVELMNHFQMNKCL 845
>gi|325184899|emb|CCA19391.1| RNA helicase putative [Albugo laibachii Nc14]
Length = 1058
Score = 184 bits (467), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 139/468 (29%), Positives = 220/468 (47%), Gaps = 51/468 (10%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + SR+ +VLV APSN A+D + ++ G+ K+VR
Sbjct: 472 PGTGKTVTSASIVYHMSRQNMGQVLVTAPSNIAVDHLTAKISAIGL----------KVVR 521
Query: 413 IGLKAHHSVNSVAIDHL--------------------VEQKRDDSAADKQKHGATRKDRD 452
+ K+ +V S +++HL ++ K D Q + +
Sbjct: 522 LAAKSREAV-SCSVEHLSLHTMVKLLTSPDKAELRKLMQLKNDQGELSSQDEKKFKSLKR 580
Query: 453 SIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVF 512
IL A ++C+T +G LS N F V+IDEA QA EP L+P+ G K V
Sbjct: 581 QAEREILQAADVICTTCVGAGDPRLS--NFRFRQVLIDEATQATEPECLIPIVQGAKHVV 638
Query: 513 LVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYD 572
+VGD QL V++ A G SLF RL + + L+ QYRMHP + FPS FY+
Sbjct: 639 MVGDHCQLGPVVMNKRAASAGLNQSLFDRLLKLDHRPFRLRVQYRMHPCLSEFPSNTFYE 698
Query: 573 EALEDGSDVEDYTTRDWHEYRCFGPF--SFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
L++G + ++ ++ P +FF I G E + S++N E V
Sbjct: 699 GELQNGVSSTERQLKNV-DFPWPNPNKPTFFYICLGAEEISSSGTSYLNRTEASNV---- 753
Query: 631 HKLISMYPQLKSS---SQLAIISPYRHQVKQFQERFKETFGVESQ--KVVDITTVDGCQG 685
K+++ + LK +Q+ +I+PY Q + + +Q K V++ +VD QG
Sbjct: 754 EKIVTAF--LKCGVLPAQIGVITPYEGQRAYVVNYMQRNGSMRAQLYKDVEVASVDSFQG 811
Query: 686 REKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKS 745
REKD+ I SCVR+++ + IGFL+D RR+NV +TRAK ++++G L + + WN L+
Sbjct: 812 REKDLIILSCVRSNENQGIGFLSDRRRLNVALTRAKYGVIILGNPRVLAKQELWNRLLNH 871
Query: 746 AEKQDCLFR--VSKPYASFFSDENLESMRKNATTDNVQGADGHVPHDD 791
+ +S SF + R NA + +G +P D
Sbjct: 872 YRDHQLVVEGPLSNLQPSFMQFPKPKQSRSNAENRYSRPRNGPIPPLD 919
>gi|242011006|ref|XP_002426248.1| regulator of nonsense transcripts, putative [Pediculus humanus
corporis]
gi|212510311|gb|EEB13510.1| regulator of nonsense transcripts, putative [Pediculus humanus
corporis]
Length = 1108
Score = 184 bits (467), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 137/425 (32%), Positives = 220/425 (51%), Gaps = 47/425 (11%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + +R+ VLVCAPSN A+D++ ++ TG+ K+VR
Sbjct: 487 PGTGKTVTSATIVYHLARQPTGAVLVCAPSNIAVDQLTEKIHRTGL----------KVVR 536
Query: 413 IGLKAHHSVNS-VAIDHLVEQKRD-DSAADKQKHGATRKDRDSIRSA------------- 457
+ K+ +++S V+ L Q R+ DS D +K + + + S+
Sbjct: 537 LCAKSREAIDSPVSFLALHNQIRNMDSNTDLKKLQQLKDETGELSSSDEKRYRMLKKSSE 596
Query: 458 --ILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVG 515
+L A ++C T +G L++L F ++IDE+ Q+ EP +VP+ G +Q+ LVG
Sbjct: 597 KEMLEAADVICCTCVGAGDPRLARLK--FHSILIDESMQSTEPECMVPVVLGARQLILVG 654
Query: 516 DPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEAL 575
D QL V+ A G SLF+RL G L+ QYRMHPE+ FPS FY+ +L
Sbjct: 655 DHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPYRLEVQYRMHPELSRFPSDFFYEGSL 714
Query: 576 EDG--SDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSG-SWINIDEVDFVLLLFHK 632
++G S+ D+ P F+ + G+E + AGSG S++N E V + K
Sbjct: 715 QNGVCSEERKLAKVDFPWPANDKPMLFY-VTTGQE-EIAGSGTSYLNRTEASNVEKIVTK 772
Query: 633 LI--SMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKV---VDITTVDGCQGRE 687
+ + P+ Q+ +I+PY Q + + +F + G K+ +++ +VD QGRE
Sbjct: 773 FLRAGIKPE-----QIGLITPYEGQ-RAYLVQFMQYQGSLHSKLYQEIEVASVDAFQGRE 826
Query: 688 KDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAE 747
KD+ I SCVR+++ IGFL D RR+NV +TRAK I+++G L + WN+L+ +
Sbjct: 827 KDIIIMSCVRSNELLGIGFLNDPRRLNVALTRAKYGIIIIGNPKVLSKQPLWNHLLNFYK 886
Query: 748 KQDCL 752
+Q L
Sbjct: 887 EQKVL 891
>gi|402594446|gb|EJW88372.1| hypothetical protein WUBG_00717 [Wuchereria bancrofti]
Length = 1089
Score = 184 bits (467), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 126/403 (31%), Positives = 203/403 (50%), Gaps = 49/403 (12%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVA--------- 425
+VLVCAPSN A+D++ ++ TG+ K+VR+ K+ +++S
Sbjct: 480 QVLVCAPSNIAVDQLAEKIHRTGL----------KVVRLCAKSRETLDSPVAFLALHNQL 529
Query: 426 -----------IDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGS 474
+ L E+ + + AD+++ A R ++ +L A ++C T +
Sbjct: 530 RALHGAAELHKLQQLKEEMGELADADERRFRALRIAKEC---QLLAAADVICCTCVSAAD 586
Query: 475 ALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGY 534
+ LS + V+IDE+ QA EP +V + G +Q+ LVGD QL ++ A G
Sbjct: 587 SRLSHMR--IKCVLIDESTQATEPEVMVAVVCGVRQLVLVGDHCQLGPVIMCKKAAKAGL 644
Query: 535 GTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRC 594
SLF+RL G L+ QYRMHP + SFPS FY+ +L++G DW
Sbjct: 645 SQSLFERLVLLGNRPIRLQVQYRMHPALSSFPSNVFYEGSLQNGE--RQLIGIDWQWPVP 702
Query: 595 FGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLI--SMYPQLKSSSQLAIISPY 652
P F+ + G+E + S++N E V L + + + P+ Q+ II+PY
Sbjct: 703 DKPMMFWSCY-GQEELSSSGTSFLNRTEAANVEKLATRFLKAGIKPE-----QIGIITPY 756
Query: 653 RHQVKQFQERFKETFGVESQKV---VDITTVDGCQGREKDVAIFSCVRASDKKSIGFLAD 709
Q + + +F +T G K+ +++ VD QGREKD+ I +CVR++D + IGFL D
Sbjct: 757 EGQ-RSYIVQFMQTQGALHSKLYLEMEVANVDAFQGREKDIIIVTCVRSNDHQGIGFLND 815
Query: 710 YRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
RR+NV +TRAK +++VG A L WN L+ +++ CL
Sbjct: 816 SRRLNVALTRAKFGLIIVGNAKVLSRHPLWNYLLSMFKEKGCL 858
>gi|291243686|ref|XP_002741733.1| PREDICTED: regulator of nonsense transcripts 1-like, partial
[Saccoglossus kowalevskii]
Length = 974
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 133/427 (31%), Positives = 220/427 (51%), Gaps = 51/427 (11%)
Query: 355 PTTGNELKPEVV--NSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + S++ +VLVCAPSN A+D++ ++ TG+ K+VR
Sbjct: 340 PGTGKTVTSATVVYHLSKQNLGQVLVCAPSNIAVDQLTEKIHRTGL----------KVVR 389
Query: 413 IGLKAHHSVNSV--------------AIDHL--VEQKRDD----SAADKQKHGATRKDRD 452
+ K+ +++S AI L ++Q +D+ S+AD++++ + +++
Sbjct: 390 LCAKSREAIDSPVSFLALHNQVRNMDAIPELQKLQQLKDETGELSSADEKRYRSLKRN-- 447
Query: 453 SIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVF 512
+L A ++C T +G L++ F ++IDE+ QA EP ++P G KQ+
Sbjct: 448 -CERELLQNADVLCCTCVGAGDPRLARFR--FRSILIDESTQATEPECMIPAVLGAKQLI 504
Query: 513 LVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYD 572
LVGD QL V+ A G SLF+RL G L+ QYRMHP + SFPS FY+
Sbjct: 505 LVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPIRLQVQYRMHPILSSFPSNIFYE 564
Query: 573 EALEDGSDVEDYTTR--DWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
+L++G + + + D+ + P F+ G+E + S++N E V +
Sbjct: 565 GSLQNGVTPGERSNKSLDFPWPQTDKPMLFYAT-TGQEEIASSGTSYLNRTEAANVEKIT 623
Query: 631 HKLI--SMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKV---VDITTVDGCQG 685
+ + + P+ Q+ II+PY Q + F ++ + G K+ ++I +VD QG
Sbjct: 624 TRFLRCGIRPE-----QIGIITPYEGQ-RSFIVQYMQHNGSLHAKLYQEIEIASVDAFQG 677
Query: 686 REKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKS 745
REKD I SCVRA++ + IGFL D RR+NV +TR K I++VG L + WN+L+
Sbjct: 678 REKDYIILSCVRANEHQGIGFLNDPRRLNVALTRCKFGIIIVGNPKVLSKQALWNHLLNH 737
Query: 746 AEKQDCL 752
++Q L
Sbjct: 738 YKEQKVL 744
>gi|410129750|dbj|BAM64829.1| hypothetical protein [Beta vulgaris]
Length = 1041
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 167/578 (28%), Positives = 258/578 (44%), Gaps = 99/578 (17%)
Query: 260 SQLEAIHEGL-LRKAF------VLIQGPPGTGKTQTILGLLSAILHATPARVHSKGG--- 309
SQ EAI + LRK LI GPPGTGKT+T+ LL IL R +
Sbjct: 261 SQKEAILSSISLRKCLHQEYKVKLIWGPPGTGKTKTVASLLFVILKQRCCRTLTCAPTNV 320
Query: 310 --LREIKRGPELPMHE-KYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVV 366
++ KR L + Y+ +G L G R I DD + E+V
Sbjct: 321 AVIQVAKRLVTLYLESLTYHTYGLGDIVLFGNEKRMKI-----DDHY----------ELV 365
Query: 367 NSSRRYRVRVL--VCAPSN---SALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSV 421
+ +YRV +L P ++LD ++ L + R N K +I KA +
Sbjct: 366 DVFLKYRVEILEECLKPLTGWRASLDSMMYLLSDPQAR-YNAYIAGDKETKIDKKAENGA 424
Query: 422 NSVAID---------------------HLVEQKRDDSAADKQKH-----GATRKDRDSIR 455
N VA + + E K+++ K K G D + +
Sbjct: 425 NVVATNVVKVDKERTTTTKKWKEIINKSMSENKKENRKKGKGKEQDGKTGDNEGDNEGTK 484
Query: 456 SAIL-------NEAVIVCSTLSFSGSALLS-------------------------KLNHG 483
++ N+ V L F L + K+
Sbjct: 485 MEVMTFEDFQRNKFCSVADRLVFCAENLYTHLPTSCLPLDVAKQMIRLVVLLSSIKMKSC 544
Query: 484 FDVVIIDEAAQAVEPATLVPLAT-GCKQVFLVGDPVQLPATVISPV-AEHLGYGTSLFKR 541
++V+IDEAAQ E + + L G K L+GD QLPA V S V + + +G SLF+R
Sbjct: 545 VEMVVIDEAAQLKECESAISLQIPGVKTAILIGDDRQLPAMVQSEVLKKKINFGRSLFER 604
Query: 542 LQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYT-TRDWHEYRCFGPFSF 600
+ R G +L QYRMHP + SFP+R+FY+ + D +V++ + +++ + +G +SF
Sbjct: 605 MVRLGKKKHLLNIQYRMHPSISSFPNRQFYENKIVDAPNVKEISYVKNFLDKGMYGTYSF 664
Query: 601 FDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLIS-MYPQLKSSSQLAIISPYRHQVKQF 659
++ GKE G S N++E D V + KL Y K + +ISPY+ QV
Sbjct: 665 INVSGGKEDFKKGH-SPRNLEEADVVDRIIAKLFKDFYCITKQKVSVGVISPYKGQVGLL 723
Query: 660 QERFKETFGVESQK-VVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGIT 718
QE+ ++ + + ++I +VDG QG E+D+ I S VR + S+GFL++ +R NV +T
Sbjct: 724 QEKLEKKYTKHKENFCINIRSVDGFQGGEEDIIIISTVRCNGNGSVGFLSNCQRTNVALT 783
Query: 719 RAKSSILVVGCASTLREDKH-WNNLVKSAEKQDCLFRV 755
RA+ + +VG STL WN+LV A+ + C + V
Sbjct: 784 RARYCLWIVGSGSTLGNSTSVWNSLVFDAKTRGCFYDV 821
>gi|412987528|emb|CCO20363.1| predicted protein [Bathycoccus prasinos]
Length = 985
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 161/542 (29%), Positives = 259/542 (47%), Gaps = 90/542 (16%)
Query: 242 SWK----IPGLLHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAIL 297
SWK I + Y K N N SQ +A+ + ++ L +GPPGTGKT+T++ L+++++
Sbjct: 490 SWKNDQRIDQAMSSYAK-NLNPSQRKAV-KAAMQNTLTLWRGPPGTGKTRTLVALIASVV 547
Query: 298 HATPARVHSKGGLREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTT 357
+ A V GG + G++S T
Sbjct: 548 NY--ANVQENGG---------------KSDRGKSS----------------------NTQ 568
Query: 358 GNELKPEVVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGI-RDENI-RSYTPKIVRIGL 415
+ P+V L CA SN A+D I+ LL I R NI R +P V+ L
Sbjct: 569 ASWRGPKV-----------LACAASNVAVDNILDALLREKIDRSMNILRLGSPARVQPWL 617
Query: 416 KAHHSVNSVAI-------DHLVEQKRDDSA--ADKQKHGATRKDRDSIRSAILNEAVIVC 466
+ VA+ + + E+ R ++ A K + A + DR++ ++N + ++
Sbjct: 618 LESTLSHKVALHPKGKEANSIRERFRGITSLEAAKARKQAQQLDREAA-IQVVNASDVIL 676
Query: 467 STLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVIS 526
+T +G LL+ + F +DEAAQ VEP TL+PL V LVGD QLP TV+S
Sbjct: 677 ATCVGAGDDLLA--DRVFRYAFVDEAAQCVEPHTLIPLTKALAGV-LVGDTKQLPPTVVS 733
Query: 527 PVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTT 586
A +G SL +RL+ G +L+ QYRMHP + +F S FYD L+ +
Sbjct: 734 RDAVAIGLQRSLIERLELLGVEPYLLEEQYRMHPGLAAFSSVRFYDRRLKSVPKPSERVA 793
Query: 587 RDWHEY-RCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQ 645
+ + P +F ++ +G+E + S N+ E + + + KL+ + +K++
Sbjct: 794 PNGVNWPSTMVPLAFVEV-KGEEMRAPDGNSIFNVQEAEECVRVVQKLL-LSGDVKNAGD 851
Query: 646 LAIISPYRHQVKQFQE----------RFKETFGVE------SQKVVDITTVDGCQGREKD 689
+ II+PY QV+ E + K T VE ++ ++I +VDG QGREK+
Sbjct: 852 IGIIAPYAAQVRAISEEWNRKVTSDVKLKNTSVVEADNPESAKDELEIRSVDGFQGREKE 911
Query: 690 VAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQ 749
V + VR + + +GF+AD RR+NV ITRAK ++V+G TL D+ W ++ +K
Sbjct: 912 VIVLCTVRNNRQNQLGFVADPRRLNVAITRAKRGLIVLGHRDTLSTDQLWQKWLQFVDKY 971
Query: 750 DC 751
+C
Sbjct: 972 EC 973
>gi|340914927|gb|EGS18268.1| eliminates the production of nonsense-containing-like protein
[Chaetomium thermophilum var. thermophilum DSM 1495]
Length = 1098
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 134/404 (33%), Positives = 202/404 (50%), Gaps = 47/404 (11%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSV-NSVAIDHLVEQK 433
+VLVCAPSN A+D++ R+ TG+ K+VR+ K+ V +SV L EQ
Sbjct: 502 QVLVCAPSNVAVDQLCERIHRTGL----------KVVRLTAKSREDVESSVKFLALHEQV 551
Query: 434 RDDSA-ADKQKHGATRKDRDSIRSA---------------ILNEAVIVCSTLSFSGSALL 477
R + D +K + + + S IL A +VC T +G L
Sbjct: 552 RMHTGNPDLRKLAQLKAEVGELSSQDEKKLKQLTRQAEREILANADVVCCTCVGAGDPRL 611
Query: 478 SKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTS 537
+K+ F V+IDE+ Q+ EP ++PL GCKQ LVGD QL +++ A G S
Sbjct: 612 AKMK--FRNVLIDESTQSAEPECMIPLVLGCKQAVLVGDHKQLGPVIMNKKAAKAGLNQS 669
Query: 538 LFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRD----WHEYR 593
LF+RL + L QYRMHP + FPS FY+ +L++G + +D W
Sbjct: 670 LFERLVKLNLTPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGVTHAERIRKDVDFPWPVAD 729
Query: 594 CFGPFSFFDIHEGKESQPAGSGSWINIDE---VDFVLLLFHKLISMYPQLKSSSQLAIIS 650
P F+ + G E A S++N E V+ V+ F K + P S + +I+
Sbjct: 730 M--PMMFWS-NLGSEEISASGTSYLNRTEAANVEKVVTRFFK-AGVKP-----SDIGVIT 780
Query: 651 PYRHQVKQFQERFKE--TFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLA 708
PY Q + TF E K V++ +VD QGREKD + SCVR++D + IGFL+
Sbjct: 781 PYEGQRSYIVSTMQNTGTFKKEWYKEVEVASVDAFQGREKDYIVLSCVRSNDNQGIGFLS 840
Query: 709 DYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
D RR+NV +TRAK ++++G L + + W++L+ + + CL
Sbjct: 841 DPRRLNVALTRAKYGLVIIGNPKVLAKHELWHHLLVHFKDRKCL 884
>gi|241598902|ref|XP_002404932.1| nonsense-mediated mRNA decay protein, putative [Ixodes scapularis]
gi|215502402|gb|EEC11896.1| nonsense-mediated mRNA decay protein, putative [Ixodes scapularis]
Length = 1122
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 124/396 (31%), Positives = 207/396 (52%), Gaps = 49/396 (12%)
Query: 376 VLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNS----VAID---- 427
VLVCAPSN A+D++ ++ T ++ +VR+ K+ ++NS +A+
Sbjct: 497 VLVCAPSNIAVDQLTEKIHQTSLKA--------GVVRLCAKSREAINSPVSFLALHNQIR 548
Query: 428 --------HLVEQKRDD----SAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSA 475
H ++Q +D+ S+AD++++ R + + +L A ++C T +G
Sbjct: 549 NMEGHSELHKLQQLKDETGELSSADEKRY---RMLKKACERELLEAADVICCTCVGAGDP 605
Query: 476 LLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYG 535
L++ F ++IDE+ QA EP +VP+ G KQ+ LVGD QL V+ A G
Sbjct: 606 RLARFK--FHSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAARAGLS 663
Query: 536 TSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDG--SDVEDYTTRDWHEYR 593
SLF+RL G L+ QYRMHP++ FPS FY+ +L++G +D D+ +
Sbjct: 664 QSLFERLVVLGIRPLRLEVQYRMHPQLSKFPSNFFYEGSLQNGVFADERRMKGVDFPWPQ 723
Query: 594 CFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLI--SMYPQLKSSSQLAIISP 651
P F+ +G+E S++N E V + + + ++ PQ Q+ II+P
Sbjct: 724 PDKPMLFYAC-QGQEEMAGSGTSYLNRTEAALVEKIATRFLRSAVKPQ-----QIGIITP 777
Query: 652 YRHQ----VKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFL 707
Y Q V+ Q F+ + + +++ +VD QGREKD+ + SCVR+++ + IGFL
Sbjct: 778 YEGQRAYLVQHMQ--FQGALHAKLYQEIEVASVDAFQGREKDLIVMSCVRSNEHQGIGFL 835
Query: 708 ADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLV 743
D RR+NV +TRA+ I++VG L + WN+L+
Sbjct: 836 NDPRRLNVALTRARYGIIIVGNPKVLSKQPLWNHLL 871
>gi|403178280|ref|XP_003336719.2| hypothetical protein PGTG_17974 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375164088|gb|EFP92300.2| hypothetical protein PGTG_17974 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 1131
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 129/404 (31%), Positives = 211/404 (52%), Gaps = 47/404 (11%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQKR 434
+VLVCAPSN A+D++ ++ TG+ K+VR+ K+ +++S ++ +L ++
Sbjct: 525 QVLVCAPSNVAVDQLTEKIHLTGL----------KVVRVQAKSREAIDS-SVQYLTLHQQ 573
Query: 435 ---DDSAADKQKHGATRKDRDSIRSA---------------ILNEAVIVCSTLSFSGSAL 476
+D+ D QK + ++ + S IL A ++ T +G
Sbjct: 574 VANNDTHPDLQKLIQLKAEQGELSSTDERRYKSLTRLCEREILTNADVILCTCVGAGDPR 633
Query: 477 LSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGT 536
L+K+ F V+IDEA QA EP ++PL G KQV VGD QL T+++ A G
Sbjct: 634 LAKMK--FRTVLIDEATQATEPECMIPLTLGVKQVVFVGDHQQLGPTIMNKKAARAGLTQ 691
Query: 537 SLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR--DWHEYRC 594
S+F+RL G L+ QYRMHP + FPS FY+ +L++G + + D+ +
Sbjct: 692 SMFERLVLLGNRPIRLQVQYRMHPCLSEFPSNMFYEGSLQNGVTAPERIKKNVDFPWPQP 751
Query: 595 FGPFSFFDIHEGKESQPAGSGSWINIDE---VDFVLLLFHKLISMYPQLKSSSQLAIISP 651
P F + G+E + S++N E V+ V+ F K + P SQ+ I++P
Sbjct: 752 TTPMCFH-CNLGQEEISSSGTSFLNRTEASNVEKVVTRFFK-AGVLP-----SQIGIVTP 804
Query: 652 YRHQVKQFQERFKETFGVESQ---KVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLA 708
Y Q + + + +T G + K +++ +VD QGREKD I SCVR++D + IGFL
Sbjct: 805 YEGQ-RSYIVTYMQTNGTLKKDLYKDIEVASVDAFQGREKDYIILSCVRSNDHQGIGFLN 863
Query: 709 DYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
D RR+NV +TRAK ++V+G L + W+ L+ + +++ CL
Sbjct: 864 DPRRLNVALTRAKYGVVVLGNPKVLSKHALWHFLLTAYKEKSCL 907
>gi|168016276|ref|XP_001760675.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688035|gb|EDQ74414.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1610
Score = 184 bits (466), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 135/427 (31%), Positives = 210/427 (49%), Gaps = 49/427 (11%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + +++ + +VLVCAPSN A+D++ ++ TG+ K+VR
Sbjct: 769 PGTGKTVTSAAIVYHLAKQGQGQVLVCAPSNVAVDQLAEKISATGL----------KVVR 818
Query: 413 IGLKAHHSVNSVAIDHLV--EQKRDDSAADKQK--------------HGATRKDRDSIRS 456
+ K+ +V+S ++HL Q R DK + + K S++
Sbjct: 819 LCAKSREAVSS-PVEHLTLHYQVRHLDTTDKSELHKLQLLKDELGELSSSDEKKYKSLKR 877
Query: 457 A----ILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVF 512
A I A ++C T +G L+ N F V++DE+ QA EP L+PL G KQ+
Sbjct: 878 ATEREISQSADVICCTCVGAGDPRLA--NFRFRQVLVDESTQATEPECLIPLVLGAKQLV 935
Query: 513 LVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYD 572
LVGD QL ++ A G SLF+RL G L+ QYRMHP + FPS FY+
Sbjct: 936 LVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGVKPIRLQVQYRMHPSLSEFPSNSFYE 995
Query: 573 EALEDGSDVED--YTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
L++G D + D+ P FF + G+E A S++N E V
Sbjct: 996 GTLQNGVTTSDRLLSQIDFPWPVPNRPM-FFYVQMGQEEISASGTSYLNRGEAGNV---- 1050
Query: 631 HKLISMYPQLKSS---SQLAIISPYRHQVKQFQERFKETFGVESQ--KVVDITTVDGCQG 685
K+++ + LKS +Q+ +I+PY Q + Q K +++ +VD QG
Sbjct: 1051 EKIVTTF--LKSGVVPAQIGVITPYEGQRAYIVNNMARNGSLRQQLYKEIEVASVDSFQG 1108
Query: 686 REKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKS 745
REKD I SCVR+++ + IGFL D RR+NV +TRA+ I+++G L + WN L+
Sbjct: 1109 REKDFIIVSCVRSNEHQGIGFLNDPRRLNVALTRARFGIVILGNPKVLSKQPLWNTLLTH 1168
Query: 746 AEKQDCL 752
++ + L
Sbjct: 1169 YKEHEVL 1175
>gi|145350386|ref|XP_001419588.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579820|gb|ABO97881.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 797
Score = 183 bits (465), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 129/418 (30%), Positives = 203/418 (48%), Gaps = 31/418 (7%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTP---- 408
P TG + V + ++R +V+VCAPSN A+D + ++ TG++ I S +
Sbjct: 378 PGTGKTVTSATLVYHLAKRGNGQVIVCAPSNVAVDHLAEKIEKTGLKVVRISSRSREHLV 437
Query: 409 ----------KIVRIGLKAHHSVNSVAIDHLVEQKRDDSAADKQKHGATRKDRDSIRSAI 458
++ IG H + + L + + SA D++K+ R + + I
Sbjct: 438 SSVEHLTLHYQVANIGGSTHKAFQK--LQQLKNELGELSAGDEKKY---RNAQKKLEREI 492
Query: 459 LNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPV 518
L A ++C+T +G L+ N F +V+IDE+ QA EP L+P+ G KQV +VGD
Sbjct: 493 LENADVICTTAVGAGDPRLA--NFRFRMVLIDESTQATEPECLIPIVMGAKQVVMVGDHK 550
Query: 519 QLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDG 578
QL V A G SLF+RL G L+ QYRMHP + FPS FYD L++G
Sbjct: 551 QLGPVVTCKQAYAAGLAQSLFERLIALGIQPIRLQIQYRMHPCLSEFPSNTFYDGTLQNG 610
Query: 579 SDVEDYTTR--DWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISM 636
+ T D+ P F+ G+E A S++N E V L++
Sbjct: 611 VSAIERTLSHIDFPWPVPSKPMMFWS-QTGQEEMSASGTSFLNRAEASAVEKCVTHLLNA 669
Query: 637 YPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQ--KVVDITTVDGCQGREKDVAIFS 694
S Q+ +++PY Q + + Q K + + +VD QG+EKD I +
Sbjct: 670 G---VSPEQIGVVTPYEGQRAYVVQHMTRVGVLHPQLYKDIQVASVDSFQGKEKDFIIMT 726
Query: 695 CVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
CVR+++K IGFL+D RR+NV ITRA+S ++V+G L + ++ ++ + CL
Sbjct: 727 CVRSNEKSGIGFLSDPRRLNVAITRARSGLIVIGNPKVLNKQHLFHEMLTHFRENGCL 784
>gi|357491663|ref|XP_003616119.1| Regulator of nonsense transcripts-like protein [Medicago
truncatula]
gi|355517454|gb|AES99077.1| Regulator of nonsense transcripts-like protein [Medicago
truncatula]
Length = 860
Score = 183 bits (465), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 110/310 (35%), Positives = 173/310 (55%), Gaps = 9/310 (2%)
Query: 451 RDSIRSAI----LNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLA- 505
RD++R + L+ A ++ T S S L + ++IDEAAQ E + +PL
Sbjct: 500 RDNMRVEVGNFCLSNACLIFCTAS-SSVKLYTAEVSPIQFLVIDEAAQLKECESTIPLQL 558
Query: 506 TGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSF 565
+G + L+GD QLPA V S +A+ +G S+F+RL GY ML QYRMHP + F
Sbjct: 559 SGLRNCILIGDERQLPALVKSKIADKCEFGRSMFERLVILGYKRHMLNIQYRMHPSISLF 618
Query: 566 PSREFYDEALEDGSDVEDYT-TRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVD 624
P +EFYDE L D V++ + + + + +SF +I +GKE S N+ EV
Sbjct: 619 PCKEFYDEKLSDAPAVKEVSYNKLFLVGDMYSSYSFINIAKGKEKLGHCGQSLKNMVEVA 678
Query: 625 FVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKE-TFGVESQKVVDITTVDGC 683
+ + L ++ + K + IISPY QV + QE+ K+ T+ S V++ +VDG
Sbjct: 679 VISEMIKSLNKVFMRTKKKVSIGIISPYNAQVNEIQEKVKQYTWDTTSDFSVNVRSVDGF 738
Query: 684 QGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTL-REDKHWNNL 742
QG E+D+ I S VR++ ++GFL++ +R NV +TRA+ + ++G A+TL D W N+
Sbjct: 739 QGGEEDIIIISTVRSNGSGNVGFLSNRQRANVAMTRARYCLWILGNAATLINSDSVWRNV 798
Query: 743 VKSAEKQDCL 752
V A+++DC
Sbjct: 799 VLDAKRRDCF 808
>gi|392567037|gb|EIW60212.1| ATP dependent helicase, partial [Trametes versicolor FP-101664 SS1]
Length = 1084
Score = 183 bits (465), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 132/409 (32%), Positives = 209/409 (51%), Gaps = 52/409 (12%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNS----------- 423
+VLVCAPSN A+D++ ++ TG+ K+VR+ K+ +++S
Sbjct: 491 QVLVCAPSNVAVDQLTEKIHATGL----------KVVRLSAKSREALDSSVSFLTLHQQV 540
Query: 424 ------VAIDHLVEQKRDD---SAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGS 474
V + L++ K + S+ D++K+ A + IL A ++C T +G
Sbjct: 541 ANNTTHVELQKLIQLKNEQGELSSNDERKYKALIRQ---CEKEILGVADVICCTCVGAGD 597
Query: 475 ALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGY 534
LSKL F V+IDEA QA EP ++PL GCKQV LVGD QL +++ A G
Sbjct: 598 PRLSKLK--FRTVLIDEATQAAEPECMIPLILGCKQVVLVGDHQQLGPVIMNKKAARAGL 655
Query: 535 GTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDW-HEYR 593
SLF+RL G L+ QYRMHP + FPS FY+ L++G + ++ +
Sbjct: 656 TQSLFERLVVLGNRPIRLQVQYRMHPCLSEFPSNMFYEGTLQNGVTAPERLRKNVDFPWP 715
Query: 594 CFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSS---SQLAIIS 650
FF + G+E + S++N E V K+++ + KS SQ+ +I+
Sbjct: 716 VPDTPMFFYQNLGQEEISSSGTSFLNRTEASNV----EKIVTKF--FKSGVVPSQIGVIT 769
Query: 651 PYRHQVKQFQE--RFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLA 708
PY Q +F + + K +++ +VD QGREKD I SCVR+++ + IGFL
Sbjct: 770 PYEGQRSYIVNYMQFNGSLKKDLYKEIEVASVDAFQGREKDYIILSCVRSNEHQGIGFLN 829
Query: 709 DYRRMNVGITRAKSSILVVG---CASTLREDKH--WNNLVKSAEKQDCL 752
D RR+NV +TRAK ++++G S L +H W+ L+ ++++CL
Sbjct: 830 DPRRLNVALTRAKYGVVILGNPKVLSKLTRLQHPLWHYLLTHYKEKNCL 878
>gi|294875682|ref|XP_002767434.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239869001|gb|EER00152.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 559
Score = 183 bits (465), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 126/408 (30%), Positives = 207/408 (50%), Gaps = 49/408 (12%)
Query: 355 PTTGNELKPEVV--NSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + + + +R+++ +VLV APSN A+D++ ++ TG+ K+VR
Sbjct: 39 PGTGKTVTSATIIYHLARQHQGQVLVTAPSNIAVDQLAEKIHLTGL----------KVVR 88
Query: 413 IGLKAHHSVNS----VAIDHLVEQKRDDSAADKQKHGATRKD---------------RDS 453
I K+ + S +++ + R A + +K +++ R
Sbjct: 89 ILAKSRECLYSPVEFLSLHTQIRNMRTPQAKEFKKLFDLKEEVGELTSSDEKRFRILRSQ 148
Query: 454 IRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFL 513
+ +L A ++C+T + +G L KL F +V++DEA QA EP L+P+ G KQV L
Sbjct: 149 VERELLENADVICTTCAGAGDPRLGKLR--FKMVLVDEATQACEPEALIPICNGAKQVIL 206
Query: 514 VGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDE 573
VGD QL V+ A G+ SLF+RL G L+ QYRMHP + FPS+ FYD
Sbjct: 207 VGDHKQLGPVVMCKKAAKAGFKQSLFERLIALGVRPIRLEVQYRMHPSLAEFPSQTFYDG 266
Query: 574 ALEDGSDVEDYTTRD----WHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLL 629
L++G +ED W P F++ G+E A S++N E +
Sbjct: 267 CLQNGITMEDRQVSGVKFPWPREEM--PMFFYN-STGQEEISASGTSYLNRSEA----IN 319
Query: 630 FHKLISMYPQLK-SSSQLAIISPYRHQ---VKQFQERFKETFGVESQKVVDITTVDGCQG 685
K+I+ + + SQ+ +++PY Q ++Q +R + T + + ++I +VD QG
Sbjct: 320 IEKIITYFLRAGLKGSQIGVVTPYEGQRAYIQQVLQR-QTTLSAKMYESIEIASVDAFQG 378
Query: 686 REKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTL 733
REKD + SCVR++ + +GFL D RR+NV +TRA+ +++ G A L
Sbjct: 379 REKDFIVLSCVRSNQRAGLGFLNDPRRLNVALTRARYGLVICGNAQVL 426
>gi|256082381|ref|XP_002577435.1| nonsense-mediated mRNA decay protein 1 (rent1) [Schistosoma
mansoni]
gi|238662753|emb|CAZ33673.1| nonsense-mediated mRNA decay protein 1 (rent1),putative
[Schistosoma mansoni]
Length = 1301
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 122/393 (31%), Positives = 195/393 (49%), Gaps = 20/393 (5%)
Query: 372 YRVRVLVCAPSNSALDEIVLRLLNTGIR--------DENIRSYTPKIVRIGLKAHHSVNS 423
++ +VLV APSN+A+D++ ++ TG++ E + S +++ + ++A +
Sbjct: 467 HQKKVLVVAPSNTAVDQLCEKIDRTGLKVVRLCARSREALASPVSRLM-LHIQAQNVKGH 525
Query: 424 VAIDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHG 483
+ L + K + + R + + +L A +VC T +G A L +L+
Sbjct: 526 TELRKLQQLKDETGELSQDDDKRYRVLKRELERELLMAADVVCCTCVTAGDARLERLS-- 583
Query: 484 FDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQ 543
F V+IDE+ QA EP L+PL GC+QV LVGD QL + A G SLF+R
Sbjct: 584 FHSVLIDESTQATEPECLIPLMVGCRQVVLVGDHCQLGPVITCKKAASAGLTQSLFERFV 643
Query: 544 RAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDI 603
G L+ QYRMHP + +FPS FY+ +L++G ED + + FF
Sbjct: 644 LLGIRPIRLQVQYRMHPALSAFPSNVFYEGSLQNGVTAEDRCKKIDFPWPNPDRPMFFYC 703
Query: 604 HEGKESQPAGSGSWINIDEVDFVLLLFHKL--ISMYPQLKSSSQLAIISPYRHQVKQFQE 661
G+E S++N E V + K+ I ++P + + +I+PY Q
Sbjct: 704 TSGQEEISGNGVSYLNRTEAATVEKIVTKMLKIGVHP-----NTIGVITPYEGQRAYLAH 758
Query: 662 --RFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITR 719
+ + + + ++I +VD QGREKD I SCVRA++ + IGFL D RR+NV +TR
Sbjct: 759 YLHYSGSLNAKLYQEIEIASVDAFQGREKDYIILSCVRANENQGIGFLNDPRRLNVALTR 818
Query: 720 AKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
A+ ++VVG L + WN L+ Q L
Sbjct: 819 ARYGLIVVGNPKALCKQPLWNQLLHFYRDQHLL 851
>gi|355567384|gb|EHH23725.1| hypothetical protein EGK_07259 [Macaca mulatta]
Length = 2709
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 125/377 (33%), Positives = 187/377 (49%), Gaps = 60/377 (15%)
Query: 426 IDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHG-- 483
I + +++++ ++ K+ G +K +S I+ E+ ++C TLS SG LL G
Sbjct: 2119 ISKVSKERQELASKIKEVQGRPQK----TQSIIILESHVICCTLSTSGGLLLESAFRGQG 2174
Query: 484 ---FDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFK 540
F VI+DEA Q+ E TL PL C ++ LVGDP QLP TVIS A+ GY S+
Sbjct: 2175 GVPFSCVIVDEAGQSCEIETLTPLIHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMA 2234
Query: 541 RLQR-----------AGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDY-TTRD 588
R R + P+ L QYRMHP++ FPS Y+ L+ E + D
Sbjct: 2235 RFCRLLEENVEHNMISRLPILQLTVQYRMHPDICLFPSNYIYNRNLKTNRQTETIRCSSD 2294
Query: 589 WHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAI 648
W F P+ FD+ +G E + + S+IN+ E+ V+ + KLI + S + I
Sbjct: 2295 WP----FQPYLVFDVGDGSERR--DNDSYINVQEIKLVMEII-KLIKDKRKDVSFRNIGI 2347
Query: 649 ISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRA-SDKKSIGFL 707
I+ Y+ Q Q+ + F + VD TVD QGR+KD I +CVRA S + SIGFL
Sbjct: 2348 ITHYKAQKTMIQKDLDKEFDRKGPAEVD--TVDAFQGRQKDCVIVTCVRANSGQGSIGFL 2405
Query: 708 ADYRRMNVGITRAKSSILVVGCAST-----------------------------LREDKH 738
A +R+NV ITRAK S+ ++G T L+E++H
Sbjct: 2406 ASLQRLNVTITRAKYSLFILGHLRTLMQLLPRSFCVHVNHSPFFSPEPKYLHWALKENQH 2465
Query: 739 WNNLVKSAEKQDCLFRV 755
WN L++ A+K+ + +
Sbjct: 2466 WNQLIQDAQKRGAIIKT 2482
>gi|224143928|ref|XP_002336092.1| predicted protein [Populus trichocarpa]
gi|222872079|gb|EEF09210.1| predicted protein [Populus trichocarpa]
Length = 1079
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 105/302 (34%), Positives = 168/302 (55%), Gaps = 5/302 (1%)
Query: 455 RSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLA-TGCKQVFL 513
R+ L A +V T S S + L ++ +++IDEAAQ E + +PL +G + L
Sbjct: 603 RNFCLGNACLVFCTAS-SSAKLHTERAKPIKLLVIDEAAQLKECESTIPLQLSGLRHAIL 661
Query: 514 VGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDE 573
+GD QLPA V S ++E +G SLF+RL + +L TQYRMHP + FP++EFYD
Sbjct: 662 IGDERQLPAMVQSKISEEAKFGRSLFERLVILEHEKHLLNTQYRMHPSISLFPNKEFYDM 721
Query: 574 ALEDGSDVEDYT-TRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHK 632
++D S+V++ + + + +GP+SF ++ GKE G S N+ EV V +
Sbjct: 722 LIQDASNVKERNYQKQFLQGNMYGPYSFINVANGKEQSNDGR-SKKNLVEVAVVSAIVAG 780
Query: 633 LISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAI 692
L + + + + +ISPY QV Q++ T+ S V++ +VDG QG E+DV I
Sbjct: 781 LFKEFKRARKRMSIGVISPYNAQVYAIQQKIGNTYSTFSDFAVNVRSVDGFQGSEEDVII 840
Query: 693 FSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTL-REDKHWNNLVKSAEKQDC 751
S VR + S+GFL++ +R NV +TRA+ + ++G +TL W LV A+++ C
Sbjct: 841 ISTVRCNASGSVGFLSNRQRANVALTRARYCLWILGNGATLVNSGSIWKKLVTDAKERGC 900
Query: 752 LF 753
+
Sbjct: 901 FY 902
>gi|355752975|gb|EHH57021.1| hypothetical protein EGM_06579 [Macaca fascicularis]
Length = 2709
Score = 183 bits (464), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 125/377 (33%), Positives = 187/377 (49%), Gaps = 60/377 (15%)
Query: 426 IDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHG-- 483
I + +++++ ++ K+ G +K +S I+ E+ ++C TLS SG LL G
Sbjct: 2119 ISKVSKERQELASKIKEVQGRPQK----TQSIIILESHVICCTLSTSGGLLLESAFRGQG 2174
Query: 484 ---FDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFK 540
F VI+DEA Q+ E TL PL C ++ LVGDP QLP TVIS A+ GY S+
Sbjct: 2175 GVPFSCVIVDEAGQSCEIETLTPLIHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMA 2234
Query: 541 RLQR-----------AGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDY-TTRD 588
R R + P+ L QYRMHP++ FPS Y+ L+ E + D
Sbjct: 2235 RFCRLLEENVEHNMISRLPILQLTVQYRMHPDICLFPSNYIYNRNLKTNRQTETIRCSSD 2294
Query: 589 WHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAI 648
W F P+ FD+ +G E + + S+IN+ E+ V+ + KLI + S + I
Sbjct: 2295 WP----FQPYLVFDVGDGSERR--DNDSYINVQEIKLVMEII-KLIKDKRKDVSFRNIGI 2347
Query: 649 ISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRA-SDKKSIGFL 707
I+ Y+ Q Q+ + F + VD TVD QGR+KD I +CVRA S + SIGFL
Sbjct: 2348 ITHYKAQKTMIQKDLDKEFDRKGPAEVD--TVDAFQGRQKDCVIVTCVRANSGQGSIGFL 2405
Query: 708 ADYRRMNVGITRAKSSILVVGCAST-----------------------------LREDKH 738
A +R+NV ITRAK S+ ++G T L+E++H
Sbjct: 2406 ASLQRLNVTITRAKYSLFILGHLRTLMQLLPRSFCVHVNHSPFFSPEPKYLHWALKENQH 2465
Query: 739 WNNLVKSAEKQDCLFRV 755
WN L++ A+K+ + +
Sbjct: 2466 WNQLIQDAQKRGAIIKT 2482
>gi|256082379|ref|XP_002577434.1| nonsense-mediated mRNA decay protein 1 (rent1) [Schistosoma
mansoni]
gi|238662752|emb|CAZ33672.1| nonsense-mediated mRNA decay protein 1 (rent1),putative
[Schistosoma mansoni]
Length = 1325
Score = 183 bits (464), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 122/393 (31%), Positives = 195/393 (49%), Gaps = 20/393 (5%)
Query: 372 YRVRVLVCAPSNSALDEIVLRLLNTGIR--------DENIRSYTPKIVRIGLKAHHSVNS 423
++ +VLV APSN+A+D++ ++ TG++ E + S +++ + ++A +
Sbjct: 491 HQKKVLVVAPSNTAVDQLCEKIDRTGLKVVRLCARSREALASPVSRLM-LHIQAQNVKGH 549
Query: 424 VAIDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHG 483
+ L + K + + R + + +L A +VC T +G A L +L+
Sbjct: 550 TELRKLQQLKDETGELSQDDDKRYRVLKRELERELLMAADVVCCTCVTAGDARLERLS-- 607
Query: 484 FDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQ 543
F V+IDE+ QA EP L+PL GC+QV LVGD QL + A G SLF+R
Sbjct: 608 FHSVLIDESTQATEPECLIPLMVGCRQVVLVGDHCQLGPVITCKKAASAGLTQSLFERFV 667
Query: 544 RAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDI 603
G L+ QYRMHP + +FPS FY+ +L++G ED + + FF
Sbjct: 668 LLGIRPIRLQVQYRMHPALSAFPSNVFYEGSLQNGVTAEDRCKKIDFPWPNPDRPMFFYC 727
Query: 604 HEGKESQPAGSGSWINIDEVDFVLLLFHKL--ISMYPQLKSSSQLAIISPYRHQVKQFQE 661
G+E S++N E V + K+ I ++P + + +I+PY Q
Sbjct: 728 TSGQEEISGNGVSYLNRTEAATVEKIVTKMLKIGVHP-----NTIGVITPYEGQRAYLAH 782
Query: 662 --RFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITR 719
+ + + + ++I +VD QGREKD I SCVRA++ + IGFL D RR+NV +TR
Sbjct: 783 YLHYSGSLNAKLYQEIEIASVDAFQGREKDYIILSCVRANENQGIGFLNDPRRLNVALTR 842
Query: 720 AKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
A+ ++VVG L + WN L+ Q L
Sbjct: 843 ARYGLIVVGNPKALCKQPLWNQLLHFYRDQHLL 875
>gi|407400115|gb|EKF28555.1| regulator of nonsense transcripts 1, putative,nonsense mRNA
reducing factor 1, putative [Trypanosoma cruzi
marinkellei]
Length = 839
Score = 182 bits (463), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 123/390 (31%), Positives = 188/390 (48%), Gaps = 23/390 (5%)
Query: 370 RRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIV-----RIGLKAH------ 418
RR ++LVCAPSN A+D++ R+ TG++ ++++ ++V +GL +
Sbjct: 423 RRTHSQILVCAPSNVAVDQLAERISATGLKTVRLQAHYREVVPSSVKHLGLDSQVEEFIA 482
Query: 419 HSVNSVAIDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLS 478
S + + L++ + A +Q I +L A ++C T + L
Sbjct: 483 SSNGNRTLKQLLDMRLAGKALGEQDIKVYNDGVRDIEEMLLGGADVICCTCIGAADRRLG 542
Query: 479 KLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSL 538
K+ F V+IDEA Q EP TLVPL G KQVFL+GD QL V S E G SL
Sbjct: 543 KMR--FQYVLIDEATQGTEPETLVPLVRGAKQVFLLGDHCQLRPIVFSLPVERAGLRRSL 600
Query: 539 FKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPF 598
F+RL G+ L QYRMHP + FPS +FY+ L++G E +
Sbjct: 601 FERLLLTGHRAVRLDVQYRMHPALSLFPSDQFYEGTLQNGLTEEQRDASQVFPWPDPTRP 660
Query: 599 SFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLIS---MYPQLKSSSQLAIISPYRHQ 655
FF G E A S++N E + KLI + P + +I+PY Q
Sbjct: 661 IFFYNTTGSEEVSANGSSYLNRAEAALTERIITKLIQDGKVKP-----DDIGVITPYGGQ 715
Query: 656 VKQFQERFKET--FGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRM 713
+ + + V++++VD QGREK+ I SCVR++ ++ IGF+ D+RR+
Sbjct: 716 CRYLMNYLLRCGPLPKTAYESVEVSSVDAFQGREKEFIILSCVRSNHRQGIGFVVDWRRL 775
Query: 714 NVGITRAKSSILVVGCASTLREDKHWNNLV 743
NV ITRAK ++++G L W+ L+
Sbjct: 776 NVSITRAKRGLIIMGNVQLLSRYPVWHALL 805
>gi|449487923|ref|XP_004157868.1| PREDICTED: uncharacterized protein LOC101231306 [Cucumis sativus]
Length = 1768
Score = 182 bits (463), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 110/327 (33%), Positives = 173/327 (52%), Gaps = 4/327 (1%)
Query: 434 RDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAA 493
R A+ Q + +R+S++ A ++ T S S K++ ++++IDEAA
Sbjct: 620 RTLQASLNQLQFPSTANRESVKKFCFQRASLILCTASSSFQLNFMKMD-PVNLLVIDEAA 678
Query: 494 QAVEPATLVPLAT-GCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKML 552
Q E ++VPL G K L+GD QLPA V S V + +GYG SLF+RL G+ +L
Sbjct: 679 QLKECESIVPLQLPGIKHAILIGDECQLPAIVSSQVCDAVGYGRSLFERLSLLGHSKHLL 738
Query: 553 KTQYRMHPEVRSFPSREFYDEALEDGSDV-EDYTTRDWHEYRCFGPFSFFDIHEGKESQP 611
TQYRMHP + FP+ +FY + D V + + + FGP+SF ++ GKE
Sbjct: 739 NTQYRMHPSISCFPNSKFYSNQILDAPLVMAEVHKKCYIPSPMFGPYSFINVSVGKEEGD 798
Query: 612 AGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVES 671
S N EV V+ + KL + K+ + +IS Y QV + Q R +
Sbjct: 799 DDGYSKKNTVEVAVVIKIIEKLYKAWRGAKTRLNVGVISFYAAQVSEIQSRLAHKYEKSH 858
Query: 672 QKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCAS 731
V + +VDG QG E+DV I + VR++ +K+IGF++ +R+NV +TRA+ + +VG A+
Sbjct: 859 NFTVKVKSVDGFQGGEEDVIILTTVRSNRRKNIGFISSSQRINVALTRARHCLWIVGDAT 918
Query: 732 TL-REDKHWNNLVKSAEKQDCLFRVSK 757
TL + W +V A+ + C F ++
Sbjct: 919 TLGNSNSEWEAVVSDAKDRQCYFNAAE 945
>gi|87311458|ref|ZP_01093578.1| DNA-binding protein [Blastopirellula marina DSM 3645]
gi|87285870|gb|EAQ77784.1| DNA-binding protein [Blastopirellula marina DSM 3645]
Length = 687
Score = 182 bits (463), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 146/444 (32%), Positives = 215/444 (48%), Gaps = 80/444 (18%)
Query: 355 PTTGNELK-PEVVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRI 413
P TG + E+V ++ +VL CAPSN A+D +V R G+ K VR+
Sbjct: 266 PGTGKTITLAEIVRAAVARGEKVLACAPSNLAVDNLVERFWACGL----------KAVRL 315
Query: 414 GLKAH--HSVNSVAIDHLVEQKRDDSAADK-------------------QKHGATRKDRD 452
G A S++ ++ LV + D A+K G R RD
Sbjct: 316 GHPARVSESLHDALLEALVREHPDAKLAEKLVSEAKTLFRKADRFTRSKPAPGEKRSLRD 375
Query: 453 SIRSAI--------------LNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEP 498
R + L++A +VC TL+ LL FD+ +IDEA Q EP
Sbjct: 376 EARELLDDAARIQQQTLERLLDDAPVVCCTLTGVDDDLLGA--RRFDLAVIDEACQTTEP 433
Query: 499 ATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYP--VKMLKTQY 556
A +P++ +++ + GD QLP T++S AE G+G S+ +RL A YP + L+ QY
Sbjct: 434 ACWIPVSRS-QRLVIAGDHCQLPPTIVSREAEAAGFGVSMLERLI-ARYPQAAQRLELQY 491
Query: 557 RMHPEVRSFPSREFYDEALEDGSDVEDYTTRD-------WHEYRCFGPFSFFDIHEGK-E 608
RMH + F S EFYD AL VE ++ D W + P FFD +
Sbjct: 492 RMHAHIMEFSSLEFYDGALLADPSVEAHSLTDLIAADELWAK-----PVQFFDTAGADYQ 546
Query: 609 SQPAGSGSWINIDEVDFVLLLFHKLIS--MYPQLKSSSQLAIISPYRHQVKQFQERFKET 666
+ S S N E + V+ ++LI+ M P+ Q+A+ISPY QV+ +E
Sbjct: 547 EEQDDSSSRTNPREAELVVRKVNQLIALEMPPE-----QIAVISPYAAQVRLLRESLP-- 599
Query: 667 FGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILV 726
GVE +VDG QGRE++V I S VR+++K IGFLAD RRMNV +TRAK ++V
Sbjct: 600 GGVECD------SVDGFQGREQEVVICSLVRSNEKGEIGFLADVRRMNVAMTRAKRKLIV 653
Query: 727 VGCASTLREDKHWNNLVKSAEKQD 750
+G +ST+ ++ + ++ E D
Sbjct: 654 IGDSSTIGGNEFYARFLEYVESMD 677
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 13/80 (16%)
Query: 224 FKDLILSASEKSSGSQDQSWKIPGLLHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGT 283
+D++L S +D+S P L NASQ A+ L + F +I GPPGT
Sbjct: 218 LRDVLLELQSPSFDERDESLASPQL---------NASQQAAVQLALSARDFSIIHGPPGT 268
Query: 284 GKTQTILGLLSAILHATPAR 303
GKT T L+ I+ A AR
Sbjct: 269 GKTIT----LAEIVRAAVAR 284
>gi|441623770|ref|XP_004088937.1| PREDICTED: LOW QUALITY PROTEIN: probable helicase senataxin [Nomascus
leucogenys]
Length = 2636
Score = 182 bits (463), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 126/377 (33%), Positives = 187/377 (49%), Gaps = 60/377 (15%)
Query: 426 IDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHG-- 483
I + +++++ ++ K+ G +K +S I+ E+ ++C TLS SG LL G
Sbjct: 2115 ISKVSKERQELASKIKEVQGRPQK----TQSIIILESHVICCTLSTSGGLLLESAFRGQG 2170
Query: 484 ---FDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFK 540
F VI+DEA Q+ E TL PL C ++ LVGDP QLP TVIS A+ GY SL
Sbjct: 2171 GVPFSCVIVDEAGQSCEIETLTPLIHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSLMA 2230
Query: 541 RLQR-----------AGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDY-TTRD 588
R R + P+ L QYRMHP++ FPS Y+ L+ E + D
Sbjct: 2231 RFCRLLEENVEHNMISRLPILQLTVQYRMHPDICLFPSNYVYNRNLKTNRQTEAIRCSSD 2290
Query: 589 WHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAI 648
W F P+ FD+ +G E + + S+IN+ E+ V+ + KLI + S + I
Sbjct: 2291 WP----FQPYLVFDVGDGSERR--DNDSYINVQEIKLVMEII-KLIKDKRKDVSFRNIGI 2343
Query: 649 ISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRA-SDKKSIGFL 707
I+ Y+ Q Q+ + F + VD TVD QGR+KD I +CVRA S + SIGFL
Sbjct: 2344 ITHYKAQKTMIQKDLDKEFDRKGPAEVD--TVDAFQGRQKDCVIVTCVRANSMQGSIGFL 2401
Query: 708 ADYRRMNVGITRAKSSILVVGCAST-----------------------------LREDKH 738
A +R+NV ITRAK S+ ++G T L+E++H
Sbjct: 2402 ASLQRLNVTITRAKYSLFILGHLRTLMQLLPRSFCVHVNHSPFFSPEPKYLHWALKENQH 2461
Query: 739 WNNLVKSAEKQDCLFRV 755
WN L++ A+K+ + +
Sbjct: 2462 WNQLIQDAQKRGAIIKT 2478
Score = 40.0 bits (92), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 66/135 (48%), Gaps = 30/135 (22%)
Query: 183 IHSLITSSVSAVEKRLFSLKIC-SLSTIAREYLALRSVGSLPF--KDLILSASEKSSGSQ 239
++ ++ SS+ +++L ++ + S + +AR A+ + + F KDL+ + SE+
Sbjct: 1874 VNCIVISSLVTTQRKLKAMSLLGSRNQLAR---AILNPNPMDFCTKDLLTTTSER----- 1925
Query: 240 DQSWKIPGLLHEYIKENHNASQLEAI--------HEGLLRKAFVLIQGPPGTGKTQTILG 291
I L ++ N Q +AI H + K LI GPPGTGK++TI+G
Sbjct: 1926 -----IIAYLRDF-----NEDQKKAIETAYAMVKHSSSVAK-ICLIHGPPGTGKSKTIVG 1974
Query: 292 LLSAILHATPARVHS 306
LL +L + HS
Sbjct: 1975 LLYRLLTENQRKGHS 1989
>gi|402220492|gb|EJU00563.1| P-loop containing nucleoside triphosphate hydrolase protein
[Dacryopinax sp. DJM-731 SS1]
Length = 868
Score = 182 bits (463), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 136/424 (32%), Positives = 210/424 (49%), Gaps = 70/424 (16%)
Query: 376 VLVCAPSNSALDEIVLRLLNTGIRDENI----RSYTPKI----VRIGLKAHHSVNSV--- 424
+LV +N A+D +V L G+R + S PK+ + + + AH V
Sbjct: 399 LLVATYTNVAVDNLVAGLAAAGLRPLRVGGEEYSQQPKLDKHRLEVKIAAHPLQKEVEKL 458
Query: 425 --AIDHLVEQKRDDSAADKQKHGATRKDRD----------------SIRSAILNEAV--- 463
AID L +++R+ A K R +R +IR+A++++ V
Sbjct: 459 EKAIDKLSDRRREAIDAAKPSKNEERIERAKNTHKEHLLRLKMKKFAIRNAMIHDIVSKA 518
Query: 464 -IVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPA 522
+VC+T S + L+ ++ F VV +DEA+ + EPA+L+PL G + V L+GD QLP
Sbjct: 519 DVVCTTCLTSANTALNVID--FPVVFLDEASMSTEPASLIPLMKGSRHVALIGDHKQLPP 576
Query: 523 TVISPVAEHLGYGTSLFKRLQRAG-YPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSD- 580
+ S A+ G SLF+RL G P ML QYRMHP + FPS +FY++ L DG+
Sbjct: 577 IITSAEAQAGGLSKSLFERLTEEGDTPSIMLDMQYRMHPSISRFPSAQFYNKTLRDGTVD 636
Query: 581 ----------------VEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVD 624
++D + + + F D H G E++ S IN E
Sbjct: 637 HAGKVRPSLAPPKSTLLDDESVSELQTEKERLSVVFVD-HAGSEAK--KDRSRINAGEAQ 693
Query: 625 FVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQF----------QERFKETFGVE---S 671
V + +L+ P + + + II+PY Q++ ERFK T G
Sbjct: 694 MVCSIVEELLYCNPSM-TGDDIGIIAPYVAQIRLLDRLLKHDQEQAERFKSTLGEHRGLQ 752
Query: 672 QKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCAS 731
+++ TVDG +GREK+V IFS VR + + +IGFLAD RR+NVG+TRA+ ++ V+G A
Sbjct: 753 MSNIEVKTVDGFEGREKEVIIFSTVRNNPQGAIGFLADGRRLNVGLTRARRALFVLGNAG 812
Query: 732 TLRE 735
TL++
Sbjct: 813 TLKD 816
>gi|255088141|ref|XP_002505993.1| predicted protein [Micromonas sp. RCC299]
gi|226521264|gb|ACO67251.1| predicted protein [Micromonas sp. RCC299]
Length = 812
Score = 182 bits (463), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 131/428 (30%), Positives = 214/428 (50%), Gaps = 51/428 (11%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V ++++ +V+VCAPSN A+D++ ++ TG+R +VR
Sbjct: 387 PGTGKTVTSATIVYQLAQQHLGQVIVCAPSNVAVDQLAEKIERTGLR----------VVR 436
Query: 413 IGLKAHHSVNSVAIDHL-------------------VEQKRDD----SAADKQKHGATRK 449
+ ++ V S ++HL ++Q +D+ S+ D+++H ++
Sbjct: 437 LAARSREHVAS-PVEHLTLHYQVAHLDSPETAEFKKLQQLKDELGELSSNDERRH---KR 492
Query: 450 DRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCK 509
+ I I+ A +VC T +G L+ F V++DE+ QA EP L+PL G K
Sbjct: 493 LKRKIEREIIAAADVVCVTAVGAGDPRLADFR--FRQVLMDESTQATEPECLIPLIMGAK 550
Query: 510 QVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSRE 569
QV +VGD QL V S A G G S+F+RL G L+ QYRMHP + FPS
Sbjct: 551 QVVMVGDHCQLGPVVTSKKAARAGLGQSMFERLISLGVQPIRLQVQYRMHPCLSEFPSNA 610
Query: 570 FYDEALEDGSDVED--YTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVL 627
FY+ AL++G D T D+ P F+ + G E A S++N E V
Sbjct: 611 FYEGALQNGVAAADRLLTHVDFPWPNPTSPMMFWSM-TGAEEISASGTSYLNRAEAAGVE 669
Query: 628 LLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKV---VDITTVDGCQ 684
+ L+ ++ +++PY Q + + + GV + ++ V++ +VD Q
Sbjct: 670 KVVTHLLRAG---VDPGRIGVVTPYEGQ-RAYVSQHMTRAGVLATRLYGEVEVASVDAFQ 725
Query: 685 GREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVK 744
GREKD I SCVR+++K IGFL D RR+NV +TRA+S ++++G L + +++L+
Sbjct: 726 GREKDFIILSCVRSNEKTGIGFLNDPRRLNVAMTRARSGLVILGNPKVLSRQRLFHDLLN 785
Query: 745 SAEKQDCL 752
+ CL
Sbjct: 786 HFRDEGCL 793
>gi|322789964|gb|EFZ15058.1| hypothetical protein SINV_12997 [Solenopsis invicta]
Length = 966
Score = 182 bits (463), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 129/404 (31%), Positives = 212/404 (52%), Gaps = 49/404 (12%)
Query: 376 VLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNS----VAIDHLV- 430
VLVCAPSN+A+D++ E I K+VR+ K+ +++S +A+ + +
Sbjct: 346 VLVCAPSNTAVDQLT----------EKIHKSNLKVVRLCAKSREAIDSPVSFLALHNQIK 395
Query: 431 -----------EQKRDD----SAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSA 475
+Q +D+ S+ D++++ +K + +L A ++C T +G
Sbjct: 396 NMETNTELQKLQQLKDETGELSSVDEKRYRLLKK---AAEKELLEAADVICCTCVGAGDP 452
Query: 476 LLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYG 535
L +L F ++IDE+ QA EP +VP+ G KQ+ LVGD QL V+ A G
Sbjct: 453 RLHRLK--FHSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAARAGLS 510
Query: 536 TSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDG--SDVEDYTTRDWHEYR 593
SLF+RL G L+ QYRMHP++ FPS FY+ +L++G +D D+
Sbjct: 511 QSLFERLVVLGIRPFRLEVQYRMHPDLSRFPSNFFYEGSLQNGVCADERKLLKIDFPWPA 570
Query: 594 CFGPFSFFDIHEGKESQPAGSG-SWINIDEVDFVLLLFHKLI--SMYPQLKSSSQLAIIS 650
P FF + +G+E + AGSG S++N E V + + + + P+ Q+ +I+
Sbjct: 571 PDKPM-FFYVTQGQE-EIAGSGTSYLNRTEASNVEKITTRFLRCGVKPE-----QIGVIT 623
Query: 651 PYRHQVKQFQERFKETFGVESQ--KVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLA 708
PY Q + + + S+ + +++ +VD QGREKD+ I SCVR+++ + IGFL
Sbjct: 624 PYEGQRAYLVQYMQYQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLN 683
Query: 709 DYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
D RR+NV +TRAK I++VG L + WN+L+ ++Q L
Sbjct: 684 DPRRLNVALTRAKYGIIIVGNPKVLSKQPLWNHLLSFYKEQKVL 727
>gi|307207583|gb|EFN85248.1| Regulator of nonsense transcripts 1 [Harpegnathos saltator]
Length = 1108
Score = 182 bits (463), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 130/403 (32%), Positives = 212/403 (52%), Gaps = 47/403 (11%)
Query: 376 VLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNS----VAIDHLV- 430
VLVCAPSN+A+D++ E I K+VR+ K+ +++S +A+ + +
Sbjct: 488 VLVCAPSNTAVDQLT----------EKIHKSNLKVVRLCAKSREAIDSPVSFLALHNQIK 537
Query: 431 -----------EQKRDD----SAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSA 475
+Q +D+ S+ D++++ +K + +L A ++C T +G
Sbjct: 538 NMETNTELQKLQQLKDETGELSSVDEKRYRLLKK---AAEKELLEAADVICCTCVGAGDP 594
Query: 476 LLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYG 535
L +L F ++IDE+ QA EP +VP+ G KQ+ LVGD QL V+ A G
Sbjct: 595 RLHRLK--FHSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAARAGLS 652
Query: 536 TSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDG--SDVEDYTTRDWHEYR 593
SLF+RL G L+ QYRMHP++ FPS FY+ +L++G +D D+
Sbjct: 653 QSLFERLVVLGIRPFRLEVQYRMHPDLSRFPSNFFYEGSLQNGVCADERKLLKIDFPWPV 712
Query: 594 CFGPFSFFDIHEGKESQPAGSG-SWINIDEVDFVLLLFHKLISMYPQLK-SSSQLAIISP 651
P FF + +G+E + AGSG S++N E V K+ + + + S Q+ +I+P
Sbjct: 713 QDKPM-FFYVTQGQE-EIAGSGTSYLNRTEASNV----EKITTRFLRCGVKSEQIGVITP 766
Query: 652 YRHQVKQFQERFKETFGVESQ--KVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLAD 709
Y Q + + + S+ + +++ +VD QGREKD+ I SCVR+++ + IGFL D
Sbjct: 767 YEGQRAFLVQHMQYQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLND 826
Query: 710 YRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
RR+NV +TRAK I++VG L + WN+L+ ++Q L
Sbjct: 827 PRRLNVALTRAKYGIIIVGNPKVLSKQALWNHLLNFYKEQKVL 869
>gi|326514986|dbj|BAJ99854.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 710
Score = 182 bits (462), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 98/277 (35%), Positives = 157/277 (56%), Gaps = 3/277 (1%)
Query: 484 FDVVIIDEAAQAVEPATLVPLATGC-KQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRL 542
+++++DEAAQ E ++PL C + +GD QLPA + S ++E+ +G S+F+RL
Sbjct: 403 LELLVVDEAAQLKECEAMIPLQLPCIRHAVFIGDERQLPALIKSKISENADFGRSIFERL 462
Query: 543 QRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYT-TRDWHEYRCFGPFSFF 601
G P +L TQYRMHPE+ FP FY + DG +V + R FGP+SF
Sbjct: 463 ISLGCPKHLLDTQYRMHPEISRFPVWRFYGGEIGDGPNVVFKSHRRRLLRGNMFGPYSFI 522
Query: 602 DIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQE 661
++ G+ES S S N E+ V L+ +L + + I+SPY QV+ FQE
Sbjct: 523 NVRGGRESSEEHSRSPKNTIEIAVVSLIVERLFRESASSGTRLSVGILSPYNAQVRAFQE 582
Query: 662 RFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAK 721
+ ++ +G + I +VDG QG E+DV I S VR+++ ++GFL D +R NV +TRAK
Sbjct: 583 KLEKPYGSRDGFSLKIKSVDGFQGGEEDVIIISTVRSNEDGAVGFLRDAKRTNVALTRAK 642
Query: 722 SSILVVGCASTLREDKH-WNNLVKSAEKQDCLFRVSK 757
+ V+G A+TL +++ W ++V ++++ F +
Sbjct: 643 HCLWVIGNATTLSKNRSVWQDIVYDSQRRQRFFHADR 679
>gi|357460649|ref|XP_003600606.1| DNA polymerase alpha-associated DNA helicase A [Medicago
truncatula]
gi|355489654|gb|AES70857.1| DNA polymerase alpha-associated DNA helicase A [Medicago
truncatula]
Length = 950
Score = 182 bits (462), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 107/300 (35%), Positives = 166/300 (55%), Gaps = 7/300 (2%)
Query: 457 AILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLAT-GCKQVFLVG 515
++N ++I C+ + S + L ++ ++IDEAAQ E + +PL G L+G
Sbjct: 579 CLMNASLIFCT--ASSSTRLFTEGMTPIKFLVIDEAAQLKECESAIPLQLPGLHHAVLIG 636
Query: 516 DPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEAL 575
D QLPA V S V E GYG SLF+RL GY +L TQYRMHP + FP++EFY+E L
Sbjct: 637 DERQLPAVVKSTVTEEAGYGRSLFERLVSLGYKKHLLNTQYRMHPSISLFPNKEFYEEQL 696
Query: 576 EDGSDVEDYT-TRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLI 634
D V + + R + E + + +SF +I +GKE + G S N+ E + + L
Sbjct: 697 VDAPIVREMSYNRCFLEGKMYASYSFINIAKGKEQRGRGHSSK-NMVEAAVISKIIGSLK 755
Query: 635 SMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKV-VDITTVDGCQGREKDVAIF 693
+ + + + IISPY QV + QE+ K + V + +VDG QG E+D+ I
Sbjct: 756 EEFHRTRKKVSIGIISPYNAQVYEIQEKIKPNNSISDPNFSVSVRSVDGFQGGEEDIIII 815
Query: 694 SCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTL-REDKHWNNLVKSAEKQDCL 752
S VR+++ IGFL++ +R NV +TRA+ + ++G +TL + D W LV A+++ C
Sbjct: 816 STVRSNEDAKIGFLSNRQRANVALTRARHCLWILGNETTLEKSDSIWKELVLDAKERGCF 875
>gi|449445369|ref|XP_004140445.1| PREDICTED: uncharacterized protein LOC101212224 [Cucumis sativus]
Length = 1855
Score = 182 bits (461), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 110/327 (33%), Positives = 173/327 (52%), Gaps = 4/327 (1%)
Query: 434 RDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAA 493
R A+ Q + +R+S++ A ++ T S S K++ ++++IDEAA
Sbjct: 645 RTLQASLNQLQFPSTANRESVKKFCFQRASLILCTASSSFQLNFMKMD-PVNLLVIDEAA 703
Query: 494 QAVEPATLVPLAT-GCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKML 552
Q E ++VPL G K L+GD QLPA V S V + +GYG SLF+RL G+ +L
Sbjct: 704 QLKECESIVPLQLPGIKHAILIGDECQLPAIVSSQVCDAVGYGRSLFERLSLLGHSKHLL 763
Query: 553 KTQYRMHPEVRSFPSREFYDEALEDGSDV-EDYTTRDWHEYRCFGPFSFFDIHEGKESQP 611
TQYRMHP + FP+ +FY + D V + + + FGP+SF ++ GKE
Sbjct: 764 NTQYRMHPSISYFPNSKFYSNQILDAPLVMAEVHKKCYIPSPMFGPYSFINVSVGKEEGD 823
Query: 612 AGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVES 671
S N EV V+ + KL + K+ + +IS Y QV + Q R +
Sbjct: 824 DDGYSKKNTVEVAVVIKIIEKLYKAWRGAKTRLNVGVISFYAAQVSEIQSRLAHKYEKSH 883
Query: 672 QKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCAS 731
V + +VDG QG E+DV I + VR++ +K+IGF++ +R+NV +TRA+ + +VG A+
Sbjct: 884 NFTVKVKSVDGFQGGEEDVIILTTVRSNRRKNIGFISSSQRINVALTRARHCLWIVGDAT 943
Query: 732 TL-REDKHWNNLVKSAEKQDCLFRVSK 757
TL + W +V A+ + C F ++
Sbjct: 944 TLGNSNSEWEAVVSDAKDRQCYFNAAE 970
>gi|449498392|ref|XP_004160526.1| PREDICTED: uncharacterized protein LOC101225988 [Cucumis sativus]
Length = 1064
Score = 182 bits (461), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 112/320 (35%), Positives = 169/320 (52%), Gaps = 6/320 (1%)
Query: 438 AADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVE 497
A+ Q T ++ S++ A ++ T S S K++ +++IDEAAQ E
Sbjct: 432 ASLDQLQLPTTANKKSVKEFCFQRASLILCTASSSFQLNFMKMD-PVKLLVIDEAAQLKE 490
Query: 498 PATLVPLAT-GCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQY 556
++VPL G K L+GD QLPA V S V + GYG SLF+RL G+ +L TQY
Sbjct: 491 CESMVPLQLPGIKHAILIGDECQLPAIVSSQVCDAAGYGRSLFERLSLLGHSKHLLNTQY 550
Query: 557 RMHPEVRSFPSREFYDEALEDGSDVED--YTTRDWHEYRCFGPFSFFDIHEGKESQPAGS 614
RMHP + FP+ +FY + D V D Y R + FGP++F ++ GKE
Sbjct: 551 RMHPSISYFPNSKFYSNQITDAPLVMDEVYKKR-YIPSPMFGPYTFINVSVGKEEGDDDG 609
Query: 615 GSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKV 674
S N EV V+ + KL + +K+ + +IS Y QV Q R + +
Sbjct: 610 RSKKNALEVAVVIKIIEKLYKAWRSVKTRLSIGVISFYAAQVTAIQGRLGQKYEKRDGFT 669
Query: 675 VDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTL- 733
V + +VDG QG E+DV I S VR++ +K IGF+++ +R+NV +TRA+ + +VG A+TL
Sbjct: 670 VKVKSVDGFQGGEEDVIILSTVRSNRRKKIGFISNSQRINVALTRARHCLWIVGDATTLG 729
Query: 734 REDKHWNNLVKSAEKQDCLF 753
+ W +V A+ + C F
Sbjct: 730 NSNSEWEAVVSDAKDRQCYF 749
>gi|393911179|gb|EFO25239.2| nonsense mRNA reducing factor 1 NORF1 [Loa loa]
Length = 1059
Score = 182 bits (461), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 127/405 (31%), Positives = 206/405 (50%), Gaps = 49/405 (12%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNS----------- 423
+VLVCAPSN A+D++ ++ TG+ K+VR+ K+ +++S
Sbjct: 480 QVLVCAPSNIAVDQLAEKIHRTGL----------KVVRLCAKSRETLDSPVAFLALHNQL 529
Query: 424 -----VAIDHLVEQKRDD----SAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGS 474
A H ++Q +++ + AD+++ A R ++ +L A ++C T +
Sbjct: 530 KALHGAAELHKLQQLKEEIGELADADERRFRALRIAKEC---QLLAAADVICCTCVSAAD 586
Query: 475 ALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGY 534
+ LS + V+IDE+ QA EP +V + G +Q+ LVGD QL ++ A G
Sbjct: 587 SRLSHMR--IKCVLIDESTQATEPEVMVAVVCGVRQLVLVGDHCQLGPVIMCKKAAKAGL 644
Query: 535 GTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDG--SDVEDYTTRDWHEY 592
SLF+RL G L+ QYRMHP + SFPS FY+ +L++G DW
Sbjct: 645 SQSLFERLVLLGNRPIRLQVQYRMHPALSSFPSNVFYEGSLQNGVTEGERQLIGIDWQWP 704
Query: 593 RCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLI--SMYPQLKSSSQLAIIS 650
P F+ + G+E + S++N E V L + + + P+ Q+ II+
Sbjct: 705 VPDKPMMFWSCY-GQEELSSSGTSFLNRTEAANVEKLATRFLKAGIKPE-----QIGIIT 758
Query: 651 PYRHQVKQFQERFKETFGVESQKV---VDITTVDGCQGREKDVAIFSCVRASDKKSIGFL 707
PY Q + + +F +T G K+ +++ VD QGREKD+ I +CVR++D + IGFL
Sbjct: 759 PYEGQ-RSYIVQFMQTQGALHSKLYLEMEVANVDAFQGREKDIIIVTCVRSNDHQGIGFL 817
Query: 708 ADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
D RR+NV +TRAK +++VG A L WN L+ +++ CL
Sbjct: 818 NDSRRLNVALTRAKFGLIIVGNAKVLSRHPLWNYLLSVFKEKGCL 862
>gi|119608403|gb|EAW87997.1| senataxin, isoform CRA_a [Homo sapiens]
Length = 1805
Score = 182 bits (461), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 122/348 (35%), Positives = 173/348 (49%), Gaps = 56/348 (16%)
Query: 455 RSAILNEAVIVCSTLSFSGSALLSKLNHG-----FDVVIIDEAAQAVEPATLVPLATGCK 509
+S I+ E+ I+C TLS SG LL G F VI+DEA Q+ E TL PL C
Sbjct: 1240 QSIIILESHIICCTLSTSGGLLLESAFRGQGGVPFSCVIVDEAGQSCEIETLTPLIHRCN 1299
Query: 510 QVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQR-----------AGYPVKMLKTQYRM 558
++ LVGDP QLP TVIS A+ GY S+ R R + P+ L QYRM
Sbjct: 1300 KLILVGDPKQLPPTVISMKAQEYGYDQSMMARFCRLLEENVEHNMISRLPILQLTVQYRM 1359
Query: 559 HPEVRSFPSREFYDEALEDGSDVEDY-TTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSW 617
HP++ FPS Y+ L+ E + DW F P+ FD+ +G E + + S+
Sbjct: 1360 HPDICLFPSNYVYNRNLKTNRQTEAIRCSSDWP----FQPYLVFDVGDGSERR--DNDSY 1413
Query: 618 INIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDI 677
IN+ E+ V+ + KLI + S + II+ Y+ Q Q+ + F + VD
Sbjct: 1414 INVQEIKLVMEII-KLIKDKRKDVSFRNIGIITHYKAQKTMIQKDLDKEFDRKGPAEVD- 1471
Query: 678 TTVDGCQGREKDVAIFSCVRA-SDKKSIGFLADYRRMNVGITRAKSSILVVGCAST---- 732
TVD QGR+KD I +CVRA S + SIGFLA +R+NV ITRAK S+ ++G T
Sbjct: 1472 -TVDAFQGRQKDCVIVTCVRANSIQGSIGFLASLQRLNVTITRAKYSLFILGHLRTLMQL 1530
Query: 733 -------------------------LREDKHWNNLVKSAEKQDCLFRV 755
L+E++HWN L++ A+K+ + +
Sbjct: 1531 LPRSFCVHVNHSPFFSPEPKYLHWALKENQHWNQLIQDAQKRGAIIKT 1578
>gi|357491667|ref|XP_003616121.1| DNA-binding protein SMUBP-2 [Medicago truncatula]
gi|355517456|gb|AES99079.1| DNA-binding protein SMUBP-2 [Medicago truncatula]
Length = 978
Score = 182 bits (461), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 107/296 (36%), Positives = 169/296 (57%), Gaps = 6/296 (2%)
Query: 460 NEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLAT-GCKQVFLVGDPV 518
N ++ C+ + S S L ++ + ++IDEAAQ E + +PL G K+ L+GD
Sbjct: 575 NACLLFCT--ASSSSKLYTEGMKRVEFLVIDEAAQLKECESAIPLQLHGLKRCILIGDER 632
Query: 519 QLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDG 578
QLPA V S +A+ +G SLF+RL GY ML QYRMHP + FPS+EFYD L D
Sbjct: 633 QLPAMVKSKIADRAEFGRSLFERLVLLGYKKHMLDVQYRMHPSISMFPSKEFYDGQLSDA 692
Query: 579 SDVEDYT-TRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMY 637
+ V + + + + E + +G +SF +I +GKE Q S N+ E + + +L +
Sbjct: 693 NIVREISYNKRFLEGKMYGSYSFINISKGKE-QCNHDHSLKNVIEAAAISEIIGRLKKEF 751
Query: 638 PQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVR 697
+ ++ + IISPY+ QV + QE+ K+ + V + +VDG QG E+D+ I S VR
Sbjct: 752 VRARNKVSIGIISPYKAQVHEIQEKVKQYMVSDPNFSVSVRSVDGFQGGEEDIIIISTVR 811
Query: 698 ASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTL-REDKHWNNLVKSAEKQDCL 752
++ +GFL++ +R NV ITRA+ + +VG A+TL + W +V A+++DC
Sbjct: 812 SNLSGKVGFLSNRQRANVAITRARYCLWIVGNATTLVNSNSVWRKVVVDAKERDCF 867
>gi|429961769|gb|ELA41314.1| hypothetical protein VICG_01687 [Vittaforma corneae ATCC 50505]
Length = 575
Score = 182 bits (461), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 134/441 (30%), Positives = 213/441 (48%), Gaps = 51/441 (11%)
Query: 309 GLREIKRGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVV-- 366
G++E + E+ +K+ ++ V A + I G P TG + V+
Sbjct: 146 GVKETMKEIEVFQPKKFFALNQSQEIAVKAALTRTLTLIQGP----PGTGKTMVSAVIVY 201
Query: 367 NSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAI 426
N + Y +VLV APSN+A D++ +++ +TG+ K++RI K V S +
Sbjct: 202 NLVKHYGKKVLVVAPSNTAADQLAIKINDTGL----------KVLRIMSKRREDV-STDV 250
Query: 427 DHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDV 486
D L K + K+ + R +L A +VC T +G +L + F
Sbjct: 251 DFLCLHKLLNEFFIDSKNASQRN--------LLEMAEVVCCTCVTAGQKILKEFE--FPF 300
Query: 487 VIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAG 546
V+IDEA Q+ EP +LVP +++ LVGD QL T+++ G+ SLF+RL R G
Sbjct: 301 VLIDEAVQSTEPLSLVPCVYSPEKLILVGDHKQLGPTILNKDVVKYGFKQSLFERLLRIG 360
Query: 547 YPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEG 606
+L QYRMHP++ +FPS FY+ L+ G+ P +FF + +G
Sbjct: 361 VMPYLLSVQYRMHPDLCAFPSEYFYNGLLKSGTSTSKVLDL---------PNNFFYVCDG 411
Query: 607 KESQPAGSGSWINIDEV----DFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQER 662
KE S+ N E + + LF + Q+ +I+PY Q
Sbjct: 412 KEEISQSRTSFFNKSEAVIVENIIRFLFKNGV-------LEQQIGVITPYEGQRSYI--- 461
Query: 663 FKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKS 722
+ FG E+ ++I VDG QGREKD I S VR++ + +GF+ D RRMNV +TRAK
Sbjct: 462 LGQIFGNEAGN-LEIKNVDGFQGREKDFIIVSLVRSNIFQGVGFVGDKRRMNVTLTRAKH 520
Query: 723 SILVVGCASTLREDKHWNNLV 743
++++G TL +++ W +L+
Sbjct: 521 GLIIIGNPFTLYKNEMWADLL 541
>gi|320168749|gb|EFW45648.1| RENT1 [Capsaspora owczarzaki ATCC 30864]
Length = 1120
Score = 182 bits (461), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 137/432 (31%), Positives = 208/432 (48%), Gaps = 62/432 (14%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSV-NSVAIDHLVEQK 433
+VLVCAPSN A+D++ R+ TG+ K+VR+ K+ ++ +SV+ L Q
Sbjct: 546 QVLVCAPSNIAVDQLTERIHRTGL----------KVVRLAAKSREAIESSVSFLALHSQI 595
Query: 434 RDDSAADK---------QKHGATRKDRDSIRSA-------ILNEAVIVCSTLSFSGSALL 477
R+ +A + +++G D R L A ++C+T +G L
Sbjct: 596 RNSAAHPELAKLMQLREEQNGLDDVDERRFRQLKFAAERDFLKNADVICTTCVGAGDPRL 655
Query: 478 SKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTS 537
+++ F V++DEA QA EP ++P+ G KQV LVGD QL V+ A + S
Sbjct: 656 ARMR--FRAVLVDEATQATEPEAIIPIVMGAKQVVLVGDHCQLGPVVMCKKAAKANFTQS 713
Query: 538 LFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR----DWHEYR 593
LF+RL L+ QYRMHP + +FPS FY+ +L++G D T + W +
Sbjct: 714 LFERLVMGQNRPIRLEIQYRMHPCLSAFPSDTFYEGSLQNGVLAADRTPKTPAFTWPDPN 773
Query: 594 CFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSS---QLAIIS 650
P FF + G+E A S++N E V L +L LKS + Q+ +I+
Sbjct: 774 --NPM-FFWSNLGQEELSASGTSYLNRAEASSVEKLVTQL------LKSGTKPDQIGVIT 824
Query: 651 PYRHQVKQFQERFKETFGVESQ--KVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLA 708
PY Q + + SQ + +++ +VD QGREKD I SCVR++ IGFL
Sbjct: 825 PYEGQRAFILQTMTANGVLRSQLYQQIEVASVDAFQGREKDYIILSCVRSA---GIGFLN 881
Query: 709 DYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEK------------QDCLFRVS 756
D RR+NV +TRA+ ++V+G A L D WN ++ +DC R+
Sbjct: 882 DPRRLNVALTRARYGLVVIGNAHRLARDPLWNEVITYFRNHKLFMEGSLTALRDCGMRIP 941
Query: 757 KPYASFFSDENL 768
P FS L
Sbjct: 942 NPEGVRFSASRL 953
>gi|406695570|gb|EKC98873.1| hypothetical protein A1Q2_06844 [Trichosporon asahii var. asahii
CBS 8904]
Length = 1000
Score = 182 bits (461), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 136/420 (32%), Positives = 215/420 (51%), Gaps = 47/420 (11%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNS-VAIDHLVEQ- 432
+VLVCAPSN A+D + ++ TG+ K+VR+ K+ +V+S V+ L EQ
Sbjct: 444 QVLVCAPSNVAVDHLAEKIHMTGL----------KVVRLTAKSREAVDSPVSYLTLHEQV 493
Query: 433 KRDDSAADKQK------------HGATRKDRDSIRSA---ILNEAVIVCSTLSFSGSALL 477
++D+ + QK RK + +R+ ILN A ++C+T +G L
Sbjct: 494 AKNDTRRELQKLIQLRNELGELSQSDERKYKSLVRACEKDILNAADVICTTCVGAGDPRL 553
Query: 478 SKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTS 537
+K F V++DEA QA EP ++PL GCKQ LVGD QL +++ A G S
Sbjct: 554 AKFK--FRTVLVDEATQAAEPEAMIPLVMGCKQAVLVGDHQQLGPVIMNKKAARAGLSQS 611
Query: 538 LFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR--DWHEYRCF 595
LF+RL G L+ QYRMHP + FPS FY+ L++G + + D+
Sbjct: 612 LFERLVILGNRPIRLQVQYRMHPCLSEFPSNMFYEGTLQNGVTAPERLRKNVDFPWPVAD 671
Query: 596 GPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSS---SQLAIISPY 652
P F + G E + S++N E V K+++ + KS SQ+ +I+PY
Sbjct: 672 TPMMFHQ-NTGTEEISSSGTSFVNRTEAANV----EKMVTKF--FKSGVLPSQIGVITPY 724
Query: 653 RHQVKQFQERFKETFGVESQ---KVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLAD 709
Q + F + + G + K V++ +VD QGREKD I SCVR+++ + IGFL D
Sbjct: 725 EGQ-RSFIVSYMQLHGALKKDLYKEVEVASVDAFQGREKDYIILSCVRSNEHQGIGFLND 783
Query: 710 YRRMNVGITRAKSSILVVGCASTLREDK--HWNNLVKSAEKQDCLFRVSKPYASFFSDEN 767
RR+NV +TRAK ++++G L + ++ K+ + FR +P A+ ++++N
Sbjct: 784 PRRLNVALTRAKYGVVILGNPKVLSKPSMMQFSKPRKTLSRAMESFRRFEPPANDYAEKN 843
>gi|449445397|ref|XP_004140459.1| PREDICTED: regulator of nonsense transcripts 1 homolog [Cucumis
sativus]
Length = 770
Score = 182 bits (461), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 114/321 (35%), Positives = 173/321 (53%), Gaps = 20/321 (6%)
Query: 447 TRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLAT 506
++ ++SI +A ++ ST S S L S + ++V++DEAAQ E +L+PL
Sbjct: 417 SKLSKNSIEKFCFQKASLIFSTTSNS-FKLNSVKKNSLNLVVVDEAAQLKECESLIPLQL 475
Query: 507 -GCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSF 565
LVGD QLPATV S V E +G SL++RL GY +L TQYRMHP V F
Sbjct: 476 PHISHAILVGDEFQLPATVKSKVCERAKFGRSLYERLSLIGYSKHLLDTQYRMHPLVSYF 535
Query: 566 PSREFYDEALEDGSDV--EDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEV 623
P+ +FY + D S V ++Y +++ FGP+SF ++ G+E S N+ EV
Sbjct: 536 PNSKFYGNKIMDASIVMNKEY-EKEYLPSPLFGPYSFINVCGGEEESNGDGQSKKNMVEV 594
Query: 624 DFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERF--------KETFGVESQKVV 675
V + L + + K + IISPY QV QE+ E FGV+
Sbjct: 595 TVVTQIIQMLYKAWCKNKKDISIGIISPYNAQVSSIQEKLGRKYEKKNNEGFGVK----- 649
Query: 676 DITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTL-R 734
+ ++DG QG E+DV I S VR+++ +IGFL++ +R NV +TRA+ + +VG A TL +
Sbjct: 650 -VKSIDGFQGGEEDVIIISTVRSNNGHNIGFLSNKQRTNVALTRARFCLWIVGDAKTLGK 708
Query: 735 EDKHWNNLVKSAEKQDCLFRV 755
+ W +++ A+ + C F V
Sbjct: 709 SNSEWRDVIDDAKTRRCFFNV 729
>gi|323454972|gb|EGB10841.1| hypothetical protein AURANDRAFT_22049 [Aureococcus anophagefferens]
Length = 1026
Score = 182 bits (461), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 127/409 (31%), Positives = 202/409 (49%), Gaps = 54/409 (13%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLV---- 430
+VLV APSN A+D++ ++ TG+ K+VR+ K+ ++ S ++DHL
Sbjct: 456 QVLVTAPSNIAVDQLTEKIHATGL----------KVVRLCAKSREAI-STSVDHLTLHTM 504
Query: 431 -------------------EQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSF 471
E + + + AD+++ RK R + +L A ++C+T +
Sbjct: 505 LRDIDTPEIAELRKLMRLKEDQGELAPADEKQF---RKLRANTERVLLKAADVICTTCAC 561
Query: 472 SGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEH 531
+G L F V+IDEA QA EP +L+P+ G KQ+ LVGD QL ++ A
Sbjct: 562 AGDPRLGGSR--FRQVLIDEATQATEPESLIPIVLGAKQLVLVGDHQQLGPVIMCKGAAK 619
Query: 532 LGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDG-----SDVEDYTT 586
G SL++RL G L+ QYR HP + FPS FY+ L++G D+E
Sbjct: 620 AGLTQSLYERLVALGIRPIRLQVQYRSHPCLSEFPSAMFYEGTLQNGVSEGERDLEGEPR 679
Query: 587 RDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLK-SSSQ 645
W P F+ + G E A S++N E + +L++ Y +L Q
Sbjct: 680 FPWPNPEA--PMMFY-VCAGAEEMSASGTSFLNRSEAASI----ERLVTHYLKLGLDPDQ 732
Query: 646 LAIISPYRHQVKQFQERFKETFGVESQ--KVVDITTVDGCQGREKDVAIFSCVRASDKKS 703
+ +I+PY Q + + + V++ +VD QGREKDV I SCVR+++ +
Sbjct: 733 IGVITPYEGQRAYVVHHMASAGALRADVYERVEVASVDSFQGREKDVIILSCVRSNEHQG 792
Query: 704 IGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
IGFL D RR+NV +TRAK ++++G A L +D W+ L+ +K C+
Sbjct: 793 IGFLNDPRRLNVALTRAKYGLVILGAARVLAQDALWHELLTHFKKLGCV 841
>gi|303275724|ref|XP_003057156.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461508|gb|EEH58801.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 1100
Score = 182 bits (461), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 132/429 (30%), Positives = 223/429 (51%), Gaps = 53/429 (12%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + +++ + +V+VCAPSN A+D++ ++ TG+ K+VR
Sbjct: 497 PGTGKTVTSATIVYHLAQQNQGQVIVCAPSNVAVDQLAEKIEQTGL----------KVVR 546
Query: 413 IGLKAHHSVNSVAIDHL-------------------VEQKRDD----SAADKQKHGATRK 449
+ K+ +V S ++HL ++Q +D+ S+ D++K+ A ++
Sbjct: 547 VAAKSREAVLS-PVEHLTLHYQVAHLDSPEHAELAKLQQLKDELGELSSNDERKYRALKR 605
Query: 450 DRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCK 509
+ IL A +VC+T +G L+ N F V++DE+ QA EP L+PL G K
Sbjct: 606 ---ATEREILQSADVVCTTAVGAGDPRLA--NFRFRQVLMDESTQATEPECLIPLIMGAK 660
Query: 510 QVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSRE 569
QV +VGD QL V A G G SLF+RL G L+ QYRMHP + FPS
Sbjct: 661 QVVMVGDHCQLGPVVACKKAARAGLGQSLFERLILLGVQPIRLQVQYRMHPCLSEFPSNT 720
Query: 570 FYDEALEDGSDVED--YTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVL 627
FY+ AL++G + T ++ + P F+ + +E +G+ S++N E V
Sbjct: 721 FYEGALQNGVAAAERLMTHVNFPWPKPSTPMMFWSMTGAEEISASGT-SYLNRTEAVSV- 778
Query: 628 LLFHKLISMYPQLKSSSQ-LAIISPYRHQVKQFQERFKETFGVESQKV---VDITTVDGC 683
K+++ + + + + L +++PY Q + + + GV Q++ + + +VD
Sbjct: 779 ---EKIVTHFLRAGVAPEALGVVTPYEGQ-RAYVVQHMTRAGVLRQQLYNEIQVASVDSF 834
Query: 684 QGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLV 743
QGREKD I SCVR+++K IGFL D RR+NV +TRA+S ++++G L +++L+
Sbjct: 835 QGREKDFIILSCVRSNEKAGIGFLNDPRRLNVAMTRARSGLVILGNPKVLSRQPLFHDLL 894
Query: 744 KSAEKQDCL 752
+ +CL
Sbjct: 895 QHFRDCECL 903
>gi|401885778|gb|EJT49866.1| ATP dependent helicase [Trichosporon asahii var. asahii CBS 2479]
Length = 1013
Score = 182 bits (461), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 136/420 (32%), Positives = 215/420 (51%), Gaps = 47/420 (11%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNS-VAIDHLVEQ- 432
+VLVCAPSN A+D + ++ TG+ K+VR+ K+ +V+S V+ L EQ
Sbjct: 457 QVLVCAPSNVAVDHLAEKIHMTGL----------KVVRLTAKSREAVDSPVSYLTLHEQV 506
Query: 433 KRDDSAADKQK------------HGATRKDRDSIRSA---ILNEAVIVCSTLSFSGSALL 477
++D+ + QK RK + +R+ ILN A ++C+T +G L
Sbjct: 507 AKNDTRRELQKLIQLRNELGELSQSDERKYKSLVRACEKDILNAADVICTTCVGAGDPRL 566
Query: 478 SKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTS 537
+K F V++DEA QA EP ++PL GCKQ LVGD QL +++ A G S
Sbjct: 567 AKFK--FRTVLVDEATQAAEPEAMIPLVMGCKQAVLVGDHQQLGPVIMNKKAARAGLSQS 624
Query: 538 LFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR--DWHEYRCF 595
LF+RL G L+ QYRMHP + FPS FY+ L++G + + D+
Sbjct: 625 LFERLVILGNRPIRLQVQYRMHPCLSEFPSNMFYEGTLQNGVTAPERLRKNVDFPWPVAD 684
Query: 596 GPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSS---SQLAIISPY 652
P F + G E + S++N E V K+++ + KS SQ+ +I+PY
Sbjct: 685 TPMMFHQ-NTGTEEISSSGTSFVNRTEAANV----EKMVTKF--FKSGVLPSQIGVITPY 737
Query: 653 RHQVKQFQERFKETFGVESQ---KVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLAD 709
Q + F + + G + K V++ +VD QGREKD I SCVR+++ + IGFL D
Sbjct: 738 EGQ-RSFIVSYMQLHGALKKDLYKEVEVASVDAFQGREKDYIILSCVRSNEHQGIGFLND 796
Query: 710 YRRMNVGITRAKSSILVVGCASTLREDK--HWNNLVKSAEKQDCLFRVSKPYASFFSDEN 767
RR+NV +TRAK ++++G L + ++ K+ + FR +P A+ ++++N
Sbjct: 797 PRRLNVALTRAKYGVVILGNPKVLSKPSMMQFSKPRKTLSRAMESFRRFEPPANDYAEKN 856
>gi|345491346|ref|XP_003426577.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 2
[Nasonia vitripennis]
Length = 1127
Score = 182 bits (461), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 129/404 (31%), Positives = 212/404 (52%), Gaps = 49/404 (12%)
Query: 376 VLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNS----VAIDHLV- 430
VLVCAPSN+A+D++ E I K+VR+ K+ +++S +A+ + +
Sbjct: 502 VLVCAPSNTAVDQLT----------EKIHKSNLKVVRLCAKSREAIDSPVSFLALHNQIK 551
Query: 431 -----------EQKRDD----SAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSA 475
+Q +D+ S+ D++++ +K + +L A ++C T +G
Sbjct: 552 NMETNTELQKLQQLKDETGELSSVDEKRYRLLKK---AAEKELLEAADVICCTCVGAGDP 608
Query: 476 LLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYG 535
L +L F ++IDE+ QA EP +VP+ G KQ+ LVGD QL V+ A G
Sbjct: 609 RLHRLK--FHSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAARAGLS 666
Query: 536 TSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDG--SDVEDYTTRDWHEYR 593
SLF+RL G L+ QYRMHP++ FPS FY+ +L++G +D D+
Sbjct: 667 QSLFERLVVLGIRPFRLEVQYRMHPDLSRFPSNFFYEGSLQNGVCADERKLLKIDFPWPA 726
Query: 594 CFGPFSFFDIHEGKESQPAGSG-SWINIDEVDFVLLLFHKLI--SMYPQLKSSSQLAIIS 650
P FF + +G+E + AGSG S++N E V + + + + P+ Q+ +I+
Sbjct: 727 PDKPM-FFYVTQGQE-EIAGSGTSYLNRTEASNVEKITTRFLRCGVKPE-----QIGVIT 779
Query: 651 PYRHQVKQFQERFKETFGVESQ--KVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLA 708
PY Q + + + S+ + +++ +VD QGREKD+ I SCVR+++ + IGFL
Sbjct: 780 PYEGQRAYLVQYMQYQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLN 839
Query: 709 DYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
D RR+NV +TRAK I++VG L + WN+L+ ++Q L
Sbjct: 840 DPRRLNVALTRAKYGIIIVGNPKVLSKQPLWNHLLSFYKEQKVL 883
>gi|118349864|ref|XP_001008213.1| conserved hypothetical protein [Tetrahymena thermophila]
gi|89289980|gb|EAR87968.1| conserved hypothetical protein [Tetrahymena thermophila SB210]
Length = 1866
Score = 181 bits (460), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 106/311 (34%), Positives = 158/311 (50%), Gaps = 16/311 (5%)
Query: 446 ATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLA 505
A R +I +L A +VC TL+ S S L + + +V+I+DEAAQ EP ++PL
Sbjct: 1046 ARRDQIKNISDQLLGLADVVCCTLASSMSEKLERFKNQVEVLIVDEAAQCTEPNNIIPLY 1105
Query: 506 TGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSF 565
++ L+GDP QLPAT P + Y SLF+R+ L QYRMHP +R F
Sbjct: 1106 YQPNKMILIGDPKQLPATTFQPESNITKYNRSLFERIIDNKIKPYFLDQQYRMHPNIREF 1165
Query: 566 PSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDI--------HEGKESQPAGSGSW 617
PS +FYD L+DG V + ++ + F DI + E++ G S
Sbjct: 1166 PSIQFYDNKLKDGPSVANRPFPNYLQRLERFNTQFIDIVFSREKMNQKSYENEAEGLAS- 1224
Query: 618 INIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDI 677
I + ++ + + P+ K + + II+PY+ Q + E ++ K + +
Sbjct: 1225 --ISICNQIIDEIERQQKVQPESKETLSIGIITPYKQQTRLINELIRKQIPKSYHKFIQV 1282
Query: 678 TTVDGCQGREKDVAIFSCVRASDKKS-----IGFLADYRRMNVGITRAKSSILVVGCAST 732
TVD QG+EKD+ IF+ VR + K+ IGFL D RRMNV +TRAK ++V+G A T
Sbjct: 1283 NTVDSFQGQEKDIIIFTTVRVNSKQEWRENMIGFLQDERRMNVALTRAKYCLIVLGHADT 1342
Query: 733 LREDKHWNNLV 743
L + W V
Sbjct: 1343 LNSNPVWGAFV 1353
>gi|350406741|ref|XP_003487867.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 3
[Bombus impatiens]
Length = 1108
Score = 181 bits (460), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 129/404 (31%), Positives = 212/404 (52%), Gaps = 49/404 (12%)
Query: 376 VLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNS----VAIDHLV- 430
VLVCAPSN+A+D++ E I K+VR+ K+ +++S +A+ + +
Sbjct: 490 VLVCAPSNTAVDQLT----------EKIHKSNLKVVRLCAKSREAIDSPVSFLALHNQIK 539
Query: 431 -----------EQKRDD----SAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSA 475
+Q +D+ S+ D++++ +K + +L A ++C T +G
Sbjct: 540 NMETNTELQKLQQLKDETGELSSVDEKRYRLLKK---AAEKELLEAADVICCTCVGAGDP 596
Query: 476 LLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYG 535
L +L F ++IDE+ QA EP +VP+ G KQ+ LVGD QL V+ A G
Sbjct: 597 RLHRLK--FHSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAARAGLS 654
Query: 536 TSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDG--SDVEDYTTRDWHEYR 593
SLF+RL G L+ QYRMHP++ FPS FY+ +L++G +D D+
Sbjct: 655 QSLFERLVVLGIRPFRLEVQYRMHPDLSRFPSNFFYEGSLQNGVCADERKLLKIDFPWPA 714
Query: 594 CFGPFSFFDIHEGKESQPAGSG-SWINIDEVDFVLLLFHKLI--SMYPQLKSSSQLAIIS 650
P FF + +G+E + AGSG S++N E V + + + + P+ Q+ +I+
Sbjct: 715 PDKPM-FFYVTQGQE-EIAGSGTSYLNRTEASNVEKIATRFLRCGVKPE-----QIGVIT 767
Query: 651 PYRHQVKQFQERFKETFGVESQ--KVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLA 708
PY Q + + + S+ + +++ +VD QGREKD+ I SCVR+++ + IGFL
Sbjct: 768 PYEGQRAYLVQYMQYQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLN 827
Query: 709 DYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
D RR+NV +TRAK I++VG L + WN+L+ ++Q L
Sbjct: 828 DPRRLNVALTRAKYGIIIVGNPKVLSKQPLWNHLLSFYKEQKVL 871
>gi|340721321|ref|XP_003399071.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 1
[Bombus terrestris]
Length = 1119
Score = 181 bits (460), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 129/404 (31%), Positives = 212/404 (52%), Gaps = 49/404 (12%)
Query: 376 VLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNS----VAIDHLV- 430
VLVCAPSN+A+D++ E I K+VR+ K+ +++S +A+ + +
Sbjct: 501 VLVCAPSNTAVDQLT----------EKIHKSNLKVVRLCAKSREAIDSPVSFLALHNQIK 550
Query: 431 -----------EQKRDD----SAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSA 475
+Q +D+ S+ D++++ +K + +L A ++C T +G
Sbjct: 551 NMETNTELQKLQQLKDETGELSSVDEKRYRLLKK---AAEKELLEAADVICCTCVGAGDP 607
Query: 476 LLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYG 535
L +L F ++IDE+ QA EP +VP+ G KQ+ LVGD QL V+ A G
Sbjct: 608 RLHRLK--FHSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAARAGLS 665
Query: 536 TSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDG--SDVEDYTTRDWHEYR 593
SLF+RL G L+ QYRMHP++ FPS FY+ +L++G +D D+
Sbjct: 666 QSLFERLVVLGIRPFRLEVQYRMHPDLSRFPSNFFYEGSLQNGVCADERKLLKIDFPWPA 725
Query: 594 CFGPFSFFDIHEGKESQPAGSG-SWINIDEVDFVLLLFHKLI--SMYPQLKSSSQLAIIS 650
P FF + +G+E + AGSG S++N E V + + + + P+ Q+ +I+
Sbjct: 726 PDKPM-FFYVTQGQE-EIAGSGTSYLNRTEASNVEKIATRFLRCGVKPE-----QIGVIT 778
Query: 651 PYRHQVKQFQERFKETFGVESQ--KVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLA 708
PY Q + + + S+ + +++ +VD QGREKD+ I SCVR+++ + IGFL
Sbjct: 779 PYEGQRAYLVQYMQYQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLN 838
Query: 709 DYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
D RR+NV +TRAK I++VG L + WN+L+ ++Q L
Sbjct: 839 DPRRLNVALTRAKYGIIIVGNPKVLSKQPLWNHLLSFYKEQKVL 882
>gi|169852646|ref|XP_001833005.1| ATP dependent helicase [Coprinopsis cinerea okayama7#130]
gi|116505799|gb|EAU88694.1| ATP dependent helicase [Coprinopsis cinerea okayama7#130]
Length = 1079
Score = 181 bits (460), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 134/437 (30%), Positives = 216/437 (49%), Gaps = 55/437 (12%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQKR 434
+VLVCAPSN A+D++ ++ TG+ K+VR+ K+ +++S + Q+
Sbjct: 489 QVLVCAPSNVAVDQLTEKIHATGL----------KVVRLTAKSREALDSSVNFLTLHQQV 538
Query: 435 DDSAAD---------KQKHGAT-----RKDRDSIRSA---ILNEAVIVCSTLSFSGSALL 477
+S K + G RK + IR IL A ++C T +G L
Sbjct: 539 ANSTTHIELQKLIQLKNEQGELSSNDERKYKTLIRQCEKEILGAADVICCTCVGAGDPRL 598
Query: 478 SKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTS 537
SKL F V+IDEA QA EP ++PL GCKQV +VGD QL +++ A G S
Sbjct: 599 SKLR--FRTVLIDEATQAAEPECMIPLVLGCKQVVMVGDHQQLGPVIMNKKAARAGLTQS 656
Query: 538 LFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDW-HEYRCFG 596
LF+RL G L+ QYRMHP + FPS FY+ +L++G + ++ +
Sbjct: 657 LFERLVLLGNRPIRLQVQYRMHPCLSEFPSNMFYEGSLQNGVTAPERLRKNVDFPWPVPD 716
Query: 597 PFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSS---SQLAIISPYR 653
FF + G+E + S++N E V K+++ + KS +Q+ +++PY
Sbjct: 717 TPMFFYQNLGQEEISSSGTSFLNRTEASNV----EKIVTKF--FKSGVVPNQIGVVTPYE 770
Query: 654 HQVKQFQE--RFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYR 711
Q +F + + K +++ +VD QGREKD I SCVR+++ + IGFL D R
Sbjct: 771 GQRSYIVNYMQFNGSLKKDLYKEIEVASVDAFQGREKDYIILSCVRSNEHQGIGFLNDPR 830
Query: 712 RMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEK------------QDCLFRVSKPY 759
R+NV +TRAK ++++G L + W+ L+ ++ Q + + SKP
Sbjct: 831 RLNVALTRAKYGVVILGNPKVLSKHPLWHYLLTHYKESNVLVEGPLNNLQPSMIQFSKPR 890
Query: 760 ASFFSDENLESMRKNAT 776
S +++E R++ T
Sbjct: 891 RSLV--KSMEQFRRHET 905
>gi|66553048|ref|XP_393330.2| PREDICTED: regulator of nonsense transcripts 1 [Apis mellifera]
gi|380015761|ref|XP_003691864.1| PREDICTED: regulator of nonsense transcripts 1-like [Apis florea]
Length = 1119
Score = 181 bits (460), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 129/404 (31%), Positives = 212/404 (52%), Gaps = 49/404 (12%)
Query: 376 VLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNS----VAIDHLV- 430
VLVCAPSN+A+D++ E I K+VR+ K+ +++S +A+ + +
Sbjct: 501 VLVCAPSNTAVDQLT----------EKIHKSNLKVVRLCAKSREAIDSPVSFLALHNQIK 550
Query: 431 -----------EQKRDD----SAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSA 475
+Q +D+ S+ D++++ +K + +L A ++C T +G
Sbjct: 551 NMETNTELQKLQQLKDETGELSSVDEKRYRLLKK---AAEKELLEAADVICCTCVGAGDP 607
Query: 476 LLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYG 535
L +L F ++IDE+ QA EP +VP+ G KQ+ LVGD QL V+ A G
Sbjct: 608 RLHRLK--FHSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAARAGLS 665
Query: 536 TSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDG--SDVEDYTTRDWHEYR 593
SLF+RL G L+ QYRMHP++ FPS FY+ +L++G +D D+
Sbjct: 666 QSLFERLVVLGIRPFRLEVQYRMHPDLSRFPSNFFYEGSLQNGVCADERKLLKIDFPWPA 725
Query: 594 CFGPFSFFDIHEGKESQPAGSG-SWINIDEVDFVLLLFHKLI--SMYPQLKSSSQLAIIS 650
P FF + +G+E + AGSG S++N E V + + + + P+ Q+ +I+
Sbjct: 726 PDKPM-FFYVTQGQE-EIAGSGTSYLNRTEASNVEKIATRFLRCGVKPE-----QIGVIT 778
Query: 651 PYRHQVKQFQERFKETFGVESQ--KVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLA 708
PY Q + + + S+ + +++ +VD QGREKD+ I SCVR+++ + IGFL
Sbjct: 779 PYEGQRAYLVQYMQYQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLN 838
Query: 709 DYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
D RR+NV +TRAK I++VG L + WN+L+ ++Q L
Sbjct: 839 DPRRLNVALTRAKYGIIIVGNPKVLSKQPLWNHLLSFYKEQKVL 882
>gi|383847285|ref|XP_003699285.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 1
[Megachile rotundata]
Length = 1119
Score = 181 bits (460), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 129/404 (31%), Positives = 212/404 (52%), Gaps = 49/404 (12%)
Query: 376 VLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNS----VAIDHLV- 430
VLVCAPSN+A+D++ E I K+VR+ K+ +++S +A+ + +
Sbjct: 501 VLVCAPSNTAVDQLT----------EKIHKSNLKVVRLCAKSREAIDSPVSFLALHNQIK 550
Query: 431 -----------EQKRDD----SAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSA 475
+Q +D+ S+ D++++ +K + +L A ++C T +G
Sbjct: 551 NMETNTELQKLQQLKDETGELSSVDEKRYRLLKK---AAEKELLEAADVICCTCVGAGDP 607
Query: 476 LLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYG 535
L +L F ++IDE+ QA EP +VP+ G KQ+ LVGD QL V+ A G
Sbjct: 608 RLHRLK--FHSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAARAGLS 665
Query: 536 TSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDG--SDVEDYTTRDWHEYR 593
SLF+RL G L+ QYRMHP++ FPS FY+ +L++G +D D+
Sbjct: 666 QSLFERLVVLGIRPFRLEVQYRMHPDLSRFPSNFFYEGSLQNGVCADERKLLKIDFPWPA 725
Query: 594 CFGPFSFFDIHEGKESQPAGSG-SWINIDEVDFVLLLFHKLI--SMYPQLKSSSQLAIIS 650
P FF + +G+E + AGSG S++N E V + + + + P+ Q+ +I+
Sbjct: 726 PDKPM-FFYVTQGQE-EIAGSGTSYLNRTEASNVEKIATRFLRCGVKPE-----QIGVIT 778
Query: 651 PYRHQVKQFQERFKETFGVESQ--KVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLA 708
PY Q + + + S+ + +++ +VD QGREKD+ I SCVR+++ + IGFL
Sbjct: 779 PYEGQRAYLVQYMQYQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLN 838
Query: 709 DYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
D RR+NV +TRAK I++VG L + WN+L+ ++Q L
Sbjct: 839 DPRRLNVALTRAKYGIIIVGNPKVLSKQPLWNHLLSFYKEQKVL 882
>gi|154419279|ref|XP_001582656.1| possible regulator of nonsense transcripts [Trichomonas vaginalis
G3]
gi|121916893|gb|EAY21670.1| possible regulator of nonsense transcripts, putative [Trichomonas
vaginalis G3]
Length = 619
Score = 181 bits (460), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 130/388 (33%), Positives = 195/388 (50%), Gaps = 32/388 (8%)
Query: 376 VLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQ--K 433
VLVCA SN A D LR+ TG++ + S + V G ++ ++A E+ K
Sbjct: 208 VLVCAQSNVATDFATLRVAQTGVKVARVLSSNREEVA-GDVDRYTTKNLARTMFGEEFTK 266
Query: 434 RDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAA 493
++ + + TR D D +R ++ +VC+T +G A L ++ F VI DE+
Sbjct: 267 LENDKDEASRKSITRMDSDVVR-----QSEVVCTTCVSAGGARLGRIK--FQAVIFDESG 319
Query: 494 QAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLK 553
Q ++P L+PL G +Q LVGD QL V+S A Y L +RL G +L+
Sbjct: 320 QCLDPDLLIPLVHGTRQCVLVGDHKQLGPVVVSRQAVKARYDIPLMQRLILNGIHPLVLR 379
Query: 554 TQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRD----WHEYRCFGPFSFFDIHEGKES 609
TQYRMHP + +FPS FY L+DG E T + W + P F++I +E
Sbjct: 380 TQYRMHPGLSAFPSEAFYSGMLQDGVTAEHRTWPNQFMKWPNPKL--PLIFWNIPSKEEF 437
Query: 610 QPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGV 669
+G S++N EV V +L L +MY +S + +I+PY Q Q ET
Sbjct: 438 YESGL-SYVNRHEVGAVAVL---LEAMYLGGVKASDIGVITPYAGQ----QIYMIETLPA 489
Query: 670 ESQKVVD--------ITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAK 721
K+ D I +VD QGREK+ I S VRA+D+ +GF+ D R+ V +TRA+
Sbjct: 490 LCAKITDKSFFDEIEIASVDAFQGREKNFIILSNVRANDQHDLGFVKDLHRLCVSLTRAR 549
Query: 722 SSILVVGCASTLREDKHWNNLVKSAEKQ 749
++V+GCA T E+K W +K ++
Sbjct: 550 YGLIVLGCADTFSENKVWCKYIKHCQEN 577
>gi|242076908|ref|XP_002448390.1| hypothetical protein SORBIDRAFT_06g026425 [Sorghum bicolor]
gi|241939573|gb|EES12718.1| hypothetical protein SORBIDRAFT_06g026425 [Sorghum bicolor]
Length = 895
Score = 181 bits (460), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 112/314 (35%), Positives = 170/314 (54%), Gaps = 9/314 (2%)
Query: 450 DRDSIRSAILNEAVIVCSTLSFSGSAL---LSKLNHGFDVVIIDEAAQAVEPATLVP-LA 505
+RD IR +L +A + T+S S S + K ++I+DEAAQ E TL+P L
Sbjct: 548 ERD-IRMYLLQKARCILCTVSSSFSLYNVPVDKDTSPLQMLIVDEAAQLKECETLIPMLL 606
Query: 506 TGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSF 565
+Q +GD QLPA V S ++E+ +G S+F+RL Y +L QYRMHPE+ F
Sbjct: 607 PSIRQAVFIGDECQLPALVKSKISENAYFGRSVFERLSSLEYNKHLLSVQYRMHPEISKF 666
Query: 566 PSREFYDEALEDGSDV--EDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEV 623
P FYD + DG +V ++Y R + + FG +SF ++ G E+ S S N EV
Sbjct: 667 PVANFYDSKVSDGPNVVCKNYE-RKFLPGKMFGSYSFINVEGGHETTEKHSQSLKNTIEV 725
Query: 624 DFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGC 683
VL + +L + + ++SPY QV+ QE+ ++ + V + +VDG
Sbjct: 726 AAVLWIVKRLFEESVLTGTKLSVGVVSPYNAQVRAIQEKLGKSCDMYEGFSVKVKSVDGF 785
Query: 684 QGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKH-WNNL 742
QG E+D+ I S VR++ S+GFL + +R NV +TRAK + +VG +TL + + W +
Sbjct: 786 QGAEEDIIIMSTVRSNGDGSVGFLTNLQRTNVALTRAKHCLWIVGNVTTLAQSRSVWQRI 845
Query: 743 VKSAEKQDCLFRVS 756
VK A + CLF S
Sbjct: 846 VKDAMARGCLFDAS 859
>gi|345491348|ref|XP_003426578.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 3
[Nasonia vitripennis]
Length = 1121
Score = 181 bits (460), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 129/404 (31%), Positives = 212/404 (52%), Gaps = 49/404 (12%)
Query: 376 VLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNS----VAIDHLV- 430
VLVCAPSN+A+D++ E I K+VR+ K+ +++S +A+ + +
Sbjct: 502 VLVCAPSNTAVDQLT----------EKIHKSNLKVVRLCAKSREAIDSPVSFLALHNQIK 551
Query: 431 -----------EQKRDD----SAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSA 475
+Q +D+ S+ D++++ +K + +L A ++C T +G
Sbjct: 552 NMETNTELQKLQQLKDETGELSSVDEKRYRLLKK---AAEKELLEAADVICCTCVGAGDP 608
Query: 476 LLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYG 535
L +L F ++IDE+ QA EP +VP+ G KQ+ LVGD QL V+ A G
Sbjct: 609 RLHRLK--FHSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAARAGLS 666
Query: 536 TSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDG--SDVEDYTTRDWHEYR 593
SLF+RL G L+ QYRMHP++ FPS FY+ +L++G +D D+
Sbjct: 667 QSLFERLVVLGIRPFRLEVQYRMHPDLSRFPSNFFYEGSLQNGVCADERKLLKIDFPWPA 726
Query: 594 CFGPFSFFDIHEGKESQPAGSG-SWINIDEVDFVLLLFHKLI--SMYPQLKSSSQLAIIS 650
P FF + +G+E + AGSG S++N E V + + + + P+ Q+ +I+
Sbjct: 727 PDKPM-FFYVTQGQE-EIAGSGTSYLNRTEASNVEKITTRFLRCGVKPE-----QIGVIT 779
Query: 651 PYRHQVKQFQERFKETFGVESQ--KVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLA 708
PY Q + + + S+ + +++ +VD QGREKD+ I SCVR+++ + IGFL
Sbjct: 780 PYEGQRAYLVQYMQYQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLN 839
Query: 709 DYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
D RR+NV +TRAK I++VG L + WN+L+ ++Q L
Sbjct: 840 DPRRLNVALTRAKYGIIIVGNPKVLSKQPLWNHLLSFYKEQKVL 883
>gi|340721323|ref|XP_003399072.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 2
[Bombus terrestris]
Length = 1108
Score = 181 bits (460), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 129/404 (31%), Positives = 212/404 (52%), Gaps = 49/404 (12%)
Query: 376 VLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNS----VAIDHLV- 430
VLVCAPSN+A+D++ E I K+VR+ K+ +++S +A+ + +
Sbjct: 490 VLVCAPSNTAVDQLT----------EKIHKSNLKVVRLCAKSREAIDSPVSFLALHNQIK 539
Query: 431 -----------EQKRDD----SAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSA 475
+Q +D+ S+ D++++ +K + +L A ++C T +G
Sbjct: 540 NMETNTELQKLQQLKDETGELSSVDEKRYRLLKK---AAEKELLEAADVICCTCVGAGDP 596
Query: 476 LLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYG 535
L +L F ++IDE+ QA EP +VP+ G KQ+ LVGD QL V+ A G
Sbjct: 597 RLHRLK--FHSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAARAGLS 654
Query: 536 TSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDG--SDVEDYTTRDWHEYR 593
SLF+RL G L+ QYRMHP++ FPS FY+ +L++G +D D+
Sbjct: 655 QSLFERLVVLGIRPFRLEVQYRMHPDLSRFPSNFFYEGSLQNGVCADERKLLKIDFPWPA 714
Query: 594 CFGPFSFFDIHEGKESQPAGSG-SWINIDEVDFVLLLFHKLI--SMYPQLKSSSQLAIIS 650
P FF + +G+E + AGSG S++N E V + + + + P+ Q+ +I+
Sbjct: 715 PDKPM-FFYVTQGQE-EIAGSGTSYLNRTEASNVEKIATRFLRCGVKPE-----QIGVIT 767
Query: 651 PYRHQVKQFQERFKETFGVESQ--KVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLA 708
PY Q + + + S+ + +++ +VD QGREKD+ I SCVR+++ + IGFL
Sbjct: 768 PYEGQRAYLVQYMQYQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLN 827
Query: 709 DYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
D RR+NV +TRAK I++VG L + WN+L+ ++Q L
Sbjct: 828 DPRRLNVALTRAKYGIIIVGNPKVLSKQPLWNHLLSFYKEQKVL 871
>gi|350406734|ref|XP_003487865.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 1
[Bombus impatiens]
Length = 1119
Score = 181 bits (460), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 129/404 (31%), Positives = 212/404 (52%), Gaps = 49/404 (12%)
Query: 376 VLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNS----VAIDHLV- 430
VLVCAPSN+A+D++ E I K+VR+ K+ +++S +A+ + +
Sbjct: 501 VLVCAPSNTAVDQLT----------EKIHKSNLKVVRLCAKSREAIDSPVSFLALHNQIK 550
Query: 431 -----------EQKRDD----SAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSA 475
+Q +D+ S+ D++++ +K + +L A ++C T +G
Sbjct: 551 NMETNTELQKLQQLKDETGELSSVDEKRYRLLKK---AAEKELLEAADVICCTCVGAGDP 607
Query: 476 LLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYG 535
L +L F ++IDE+ QA EP +VP+ G KQ+ LVGD QL V+ A G
Sbjct: 608 RLHRLK--FHSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAARAGLS 665
Query: 536 TSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDG--SDVEDYTTRDWHEYR 593
SLF+RL G L+ QYRMHP++ FPS FY+ +L++G +D D+
Sbjct: 666 QSLFERLVVLGIRPFRLEVQYRMHPDLSRFPSNFFYEGSLQNGVCADERKLLKIDFPWPA 725
Query: 594 CFGPFSFFDIHEGKESQPAGSG-SWINIDEVDFVLLLFHKLI--SMYPQLKSSSQLAIIS 650
P FF + +G+E + AGSG S++N E V + + + + P+ Q+ +I+
Sbjct: 726 PDKPM-FFYVTQGQE-EIAGSGTSYLNRTEASNVEKIATRFLRCGVKPE-----QIGVIT 778
Query: 651 PYRHQVKQFQERFKETFGVESQ--KVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLA 708
PY Q + + + S+ + +++ +VD QGREKD+ I SCVR+++ + IGFL
Sbjct: 779 PYEGQRAYLVQYMQYQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLN 838
Query: 709 DYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
D RR+NV +TRAK I++VG L + WN+L+ ++Q L
Sbjct: 839 DPRRLNVALTRAKYGIIIVGNPKVLSKQPLWNHLLSFYKEQKVL 882
>gi|449445385|ref|XP_004140453.1| PREDICTED: uncharacterized protein LOC101214394 [Cucumis sativus]
Length = 2763
Score = 181 bits (460), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 110/311 (35%), Positives = 166/311 (53%), Gaps = 6/311 (1%)
Query: 447 TRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLAT 506
T ++ S++ A ++ T S S K++ +++IDEAAQ E ++VPL
Sbjct: 526 TTANKKSVKEFCFQRASLILCTASSSFQLNFMKMD-PVKLLVIDEAAQLKECESMVPLQL 584
Query: 507 -GCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSF 565
G K L+GD QLPA V S V + GYG SLF+RL G+ +L TQYRMHP + F
Sbjct: 585 PGIKHAILIGDECQLPAIVSSQVCDAAGYGRSLFERLSLLGHSKHLLNTQYRMHPSISYF 644
Query: 566 PSREFYDEALEDGSDVED--YTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEV 623
P+ +FY + D V D Y R + FGP++F ++ GKE S N EV
Sbjct: 645 PNSKFYSNQITDAPLVMDEVYKKR-YIPSPMFGPYTFINVSVGKEEGDDDGRSKKNALEV 703
Query: 624 DFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGC 683
V+ + KL + +K+ + +IS Y QV Q R + + V + +VDG
Sbjct: 704 AVVIKIIEKLYKAWRSVKTRLSIGVISFYAAQVTAIQGRLGQKYEKRDGFTVKVKSVDGF 763
Query: 684 QGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTL-REDKHWNNL 742
QG E+DV I S VR++ +K IGF+++ +R+NV +TRA+ + +VG A+TL + W +
Sbjct: 764 QGGEEDVIILSTVRSNRRKKIGFISNSQRINVALTRARHCLWIVGDATTLGNSNSEWEAV 823
Query: 743 VKSAEKQDCLF 753
V A+ + C F
Sbjct: 824 VSDAKDRQCYF 834
>gi|350406738|ref|XP_003487866.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 2
[Bombus impatiens]
Length = 1106
Score = 181 bits (460), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 129/404 (31%), Positives = 212/404 (52%), Gaps = 49/404 (12%)
Query: 376 VLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNS----VAIDHLV- 430
VLVCAPSN+A+D++ E I K+VR+ K+ +++S +A+ + +
Sbjct: 488 VLVCAPSNTAVDQLT----------EKIHKSNLKVVRLCAKSREAIDSPVSFLALHNQIK 537
Query: 431 -----------EQKRDD----SAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSA 475
+Q +D+ S+ D++++ +K + +L A ++C T +G
Sbjct: 538 NMETNTELQKLQQLKDETGELSSVDEKRYRLLKK---AAEKELLEAADVICCTCVGAGDP 594
Query: 476 LLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYG 535
L +L F ++IDE+ QA EP +VP+ G KQ+ LVGD QL V+ A G
Sbjct: 595 RLHRLK--FHSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAARAGLS 652
Query: 536 TSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDG--SDVEDYTTRDWHEYR 593
SLF+RL G L+ QYRMHP++ FPS FY+ +L++G +D D+
Sbjct: 653 QSLFERLVVLGIRPFRLEVQYRMHPDLSRFPSNFFYEGSLQNGVCADERKLLKIDFPWPA 712
Query: 594 CFGPFSFFDIHEGKESQPAGSG-SWINIDEVDFVLLLFHKLI--SMYPQLKSSSQLAIIS 650
P FF + +G+E + AGSG S++N E V + + + + P+ Q+ +I+
Sbjct: 713 PDKPM-FFYVTQGQE-EIAGSGTSYLNRTEASNVEKIATRFLRCGVKPE-----QIGVIT 765
Query: 651 PYRHQVKQFQERFKETFGVESQ--KVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLA 708
PY Q + + + S+ + +++ +VD QGREKD+ I SCVR+++ + IGFL
Sbjct: 766 PYEGQRAYLVQYMQYQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLN 825
Query: 709 DYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
D RR+NV +TRAK I++VG L + WN+L+ ++Q L
Sbjct: 826 DPRRLNVALTRAKYGIIIVGNPKVLSKQPLWNHLLSFYKEQKVL 869
>gi|340721325|ref|XP_003399073.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 3
[Bombus terrestris]
Length = 1106
Score = 181 bits (460), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 129/404 (31%), Positives = 212/404 (52%), Gaps = 49/404 (12%)
Query: 376 VLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNS----VAIDHLV- 430
VLVCAPSN+A+D++ E I K+VR+ K+ +++S +A+ + +
Sbjct: 488 VLVCAPSNTAVDQLT----------EKIHKSNLKVVRLCAKSREAIDSPVSFLALHNQIK 537
Query: 431 -----------EQKRDD----SAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSA 475
+Q +D+ S+ D++++ +K + +L A ++C T +G
Sbjct: 538 NMETNTELQKLQQLKDETGELSSVDEKRYRLLKK---AAEKELLEAADVICCTCVGAGDP 594
Query: 476 LLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYG 535
L +L F ++IDE+ QA EP +VP+ G KQ+ LVGD QL V+ A G
Sbjct: 595 RLHRLK--FHSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAARAGLS 652
Query: 536 TSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDG--SDVEDYTTRDWHEYR 593
SLF+RL G L+ QYRMHP++ FPS FY+ +L++G +D D+
Sbjct: 653 QSLFERLVVLGIRPFRLEVQYRMHPDLSRFPSNFFYEGSLQNGVCADERKLLKIDFPWPA 712
Query: 594 CFGPFSFFDIHEGKESQPAGSG-SWINIDEVDFVLLLFHKLI--SMYPQLKSSSQLAIIS 650
P FF + +G+E + AGSG S++N E V + + + + P+ Q+ +I+
Sbjct: 713 PDKPM-FFYVTQGQE-EIAGSGTSYLNRTEASNVEKIATRFLRCGVKPE-----QIGVIT 765
Query: 651 PYRHQVKQFQERFKETFGVESQ--KVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLA 708
PY Q + + + S+ + +++ +VD QGREKD+ I SCVR+++ + IGFL
Sbjct: 766 PYEGQRAYLVQYMQYQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLN 825
Query: 709 DYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
D RR+NV +TRAK I++VG L + WN+L+ ++Q L
Sbjct: 826 DPRRLNVALTRAKYGIIIVGNPKVLSKQPLWNHLLSFYKEQKVL 869
>gi|345491350|ref|XP_001604124.2| PREDICTED: regulator of nonsense transcripts 1-like isoform 1
[Nasonia vitripennis]
Length = 1105
Score = 181 bits (460), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 129/404 (31%), Positives = 212/404 (52%), Gaps = 49/404 (12%)
Query: 376 VLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNS----VAIDHLV- 430
VLVCAPSN+A+D++ E I K+VR+ K+ +++S +A+ + +
Sbjct: 489 VLVCAPSNTAVDQLT----------EKIHKSNLKVVRLCAKSREAIDSPVSFLALHNQIK 538
Query: 431 -----------EQKRDD----SAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSA 475
+Q +D+ S+ D++++ +K + +L A ++C T +G
Sbjct: 539 NMETNTELQKLQQLKDETGELSSVDEKRYRLLKK---AAEKELLEAADVICCTCVGAGDP 595
Query: 476 LLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYG 535
L +L F ++IDE+ QA EP +VP+ G KQ+ LVGD QL V+ A G
Sbjct: 596 RLHRLK--FHSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAARAGLS 653
Query: 536 TSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDG--SDVEDYTTRDWHEYR 593
SLF+RL G L+ QYRMHP++ FPS FY+ +L++G +D D+
Sbjct: 654 QSLFERLVVLGIRPFRLEVQYRMHPDLSRFPSNFFYEGSLQNGVCADERKLLKIDFPWPA 713
Query: 594 CFGPFSFFDIHEGKESQPAGSG-SWINIDEVDFVLLLFHKLI--SMYPQLKSSSQLAIIS 650
P FF + +G+E + AGSG S++N E V + + + + P+ Q+ +I+
Sbjct: 714 PDKPM-FFYVTQGQE-EIAGSGTSYLNRTEASNVEKITTRFLRCGVKPE-----QIGVIT 766
Query: 651 PYRHQVKQFQERFKETFGVESQ--KVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLA 708
PY Q + + + S+ + +++ +VD QGREKD+ I SCVR+++ + IGFL
Sbjct: 767 PYEGQRAYLVQYMQYQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLN 826
Query: 709 DYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
D RR+NV +TRAK I++VG L + WN+L+ ++Q L
Sbjct: 827 DPRRLNVALTRAKYGIIIVGNPKVLSKQPLWNHLLSFYKEQKVL 870
>gi|383847287|ref|XP_003699286.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 2
[Megachile rotundata]
Length = 1106
Score = 181 bits (460), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 129/404 (31%), Positives = 212/404 (52%), Gaps = 49/404 (12%)
Query: 376 VLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNS----VAIDHLV- 430
VLVCAPSN+A+D++ E I K+VR+ K+ +++S +A+ + +
Sbjct: 488 VLVCAPSNTAVDQLT----------EKIHKSNLKVVRLCAKSREAIDSPVSFLALHNQIK 537
Query: 431 -----------EQKRDD----SAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSA 475
+Q +D+ S+ D++++ +K + +L A ++C T +G
Sbjct: 538 NMETNTELQKLQQLKDETGELSSVDEKRYRLLKK---AAEKELLEAADVICCTCVGAGDP 594
Query: 476 LLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYG 535
L +L F ++IDE+ QA EP +VP+ G KQ+ LVGD QL V+ A G
Sbjct: 595 RLHRLK--FHSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAARAGLS 652
Query: 536 TSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDG--SDVEDYTTRDWHEYR 593
SLF+RL G L+ QYRMHP++ FPS FY+ +L++G +D D+
Sbjct: 653 QSLFERLVVLGIRPFRLEVQYRMHPDLSRFPSNFFYEGSLQNGVCADERKLLKIDFPWPA 712
Query: 594 CFGPFSFFDIHEGKESQPAGSG-SWINIDEVDFVLLLFHKLI--SMYPQLKSSSQLAIIS 650
P FF + +G+E + AGSG S++N E V + + + + P+ Q+ +I+
Sbjct: 713 PDKPM-FFYVTQGQE-EIAGSGTSYLNRTEASNVEKIATRFLRCGVKPE-----QIGVIT 765
Query: 651 PYRHQVKQFQERFKETFGVESQ--KVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLA 708
PY Q + + + S+ + +++ +VD QGREKD+ I SCVR+++ + IGFL
Sbjct: 766 PYEGQRAYLVQYMQYQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLN 825
Query: 709 DYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
D RR+NV +TRAK I++VG L + WN+L+ ++Q L
Sbjct: 826 DPRRLNVALTRAKYGIIIVGNPKVLSKQPLWNHLLSFYKEQKVL 869
>gi|440292088|gb|ELP85330.1| hypothetical protein EIN_085720 [Entamoeba invadens IP1]
Length = 1109
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 118/333 (35%), Positives = 178/333 (53%), Gaps = 32/333 (9%)
Query: 432 QKRDDSAADKQKHGATRKDRDSIRS-------AILNEAVIVCSTLSFSGSALLSKLNHGF 484
Q +DD+ +K GA D IR ILN+ +VC+TLS S + F
Sbjct: 519 QTQDDALWNKVSGGADFNDDQIIRKIMKNYQDVILNDCEVVCATLSKQISGV------KF 572
Query: 485 DVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQR 544
I DEA+QA+EP TL + K+V L+GD QLP TV++ A+ G S+F+RL +
Sbjct: 573 WCTIGDEASQALEPETLKAI-NEVKKVVLIGDFNQLPPTVVTTKAKQGGLDLSMFERLIQ 631
Query: 545 AGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDG-SDVEDYTTRDWHEYRCFGPFSFFDI 603
+L QYRMHP + SFPS+ FY L DG ++ + R H F P + +
Sbjct: 632 NKVFTTLLNVQYRMHPAISSFPSKNFYKGNLHDGVTEQQRSDPRLDH----FFPVEHWPV 687
Query: 604 ----HEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQF 659
HEGKES S+ N++EV V + +L + Q +L IIS Y Q++
Sbjct: 688 VFIHHEGKESVGENGASYYNVNEVGIVTAVIGELKNRGFQ---DRELGIISTYNSQIQLI 744
Query: 660 QERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITR 719
E +E Q + ++VD QG EK++ + SCVR++++ IGF++D+RRMNV +TR
Sbjct: 745 SEN------IEKQGNIQTSSVDSFQGSEKEIIVLSCVRSNERLGIGFVSDHRRMNVALTR 798
Query: 720 AKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
A+ ++VVG TL D++W L+ + ++ C+
Sbjct: 799 ARKGLVVVGNMRTLSTDQNWRKLILTYGEKQCV 831
>gi|294657547|ref|XP_002770466.1| DEHA2E12430p [Debaryomyces hansenii CBS767]
gi|199432775|emb|CAR65809.1| DEHA2E12430p [Debaryomyces hansenii CBS767]
Length = 985
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 138/424 (32%), Positives = 209/424 (49%), Gaps = 44/424 (10%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + S+ + ++LVCAPSN A+D + +L G+ K++R
Sbjct: 456 PGTGKTVTSATIVYHLSKLSKEKILVCAPSNVAVDHLADKLNLLGL----------KVIR 505
Query: 413 IGLKAHH----SVNSVAIDHLVEQK---------RDDSAADKQKHGATRKDRDSIRSA-- 457
+ K+ SVN +A+ ++V + R + + +R+ RS+
Sbjct: 506 LTAKSREDVESSVNDLALHNIVNKSAKGELKKLIRLRNELGELSESDSRQLIKLTRSSEM 565
Query: 458 -ILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGD 516
ILN+ +VC T +G LS L F V+IDE+ QA EP L+P+ G KQV LVGD
Sbjct: 566 KILNKCDVVCCTCVGAGDKRLSNLK--FRTVLIDESTQASEPEVLIPIVKGAKQVILVGD 623
Query: 517 PVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALE 576
QL ++ A G SLF+RL G+ L+ QYRM+P + FPS FY+ +L+
Sbjct: 624 HQQLGPVILDKKAGDAGLKQSLFERLVVLGHVPIRLEVQYRMNPCLSEFPSNMFYEGSLQ 683
Query: 577 DGSDVEDYTTRD----WHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHK 632
+G + + W P F+ + G+E S++N E V + K
Sbjct: 684 NGVTAKQRLIENSIFPWPVLD--NPMMFW-ANYGREEISGSGNSFLNRVEAMNVEKIITK 740
Query: 633 LISMYPQLKSSSQLAIISPYRHQ----VKQFQERFKETFGVESQKVVDITTVDGCQGREK 688
L + SQ+ +I+PY Q V+ T E V+IT+VD QGREK
Sbjct: 741 L---FKDGIEPSQIGVITPYEGQRAYIVQYMSMNSTLTELKEKYLEVEITSVDAFQGREK 797
Query: 689 DVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEK 748
D I SCVRA+D + IGFL+D RR+NV +TRAK ++++G L + WN+L+ +
Sbjct: 798 DFIILSCVRANDSQVIGFLSDPRRLNVALTRAKYGLVILGNPRALCRNTLWNHLLIHFRE 857
Query: 749 QDCL 752
+ CL
Sbjct: 858 KGCL 861
>gi|300176328|emb|CBK23639.2| unnamed protein product [Blastocystis hominis]
Length = 321
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 105/306 (34%), Positives = 171/306 (55%), Gaps = 9/306 (2%)
Query: 444 HGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHG--FDVVIIDEAAQAVEPATL 501
+ ++ + + ++N I+ +TLS SG +++S + G + +++DEA QA E +TL
Sbjct: 16 YNYSQMNTSDLEGYLVNNYDIILTTLSSSGLSVISGIPIGPRYSALVVDEACQATEVSTL 75
Query: 502 VPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYR-MHP 560
+PL ++ L+GDP QLPATVIS ++ Y SLF+RL + +L TQYR HP
Sbjct: 76 IPLLINPQKCVLIGDPKQLPATVISANNQN-NYNLSLFERLSNNNHYSYLLNTQYRRCHP 134
Query: 561 EVRSFPSREFYDEALEDGSDVEDY-TTRDWHEYRCFGPFSFFDI--HEGKESQPAGSGSW 617
+ +FP++ FYD L +G +V + ++E F P F+++ E + A S S+
Sbjct: 135 NIIAFPNQCFYDGKLMNGENVSGRGYSHQFYESDYFYPVVFYNLCGSNVSEKKDAFSKSY 194
Query: 618 INIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDI 677
N EV FVL L++ +++YP S S + I++PY+ Q F+ R + E + + +
Sbjct: 195 SNESEVRFVLNLYNTFLNLYPSYSSMS-VVILTPYKEQKSLFESRIAQHPN-ELVRRLHV 252
Query: 678 TTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDK 737
TVD QG+E D+ +S VR +GF++D RRMNV TR + + VVG + LR
Sbjct: 253 FTVDAFQGKEVDLVFYSTVRTGSAYGVGFVSDIRRMNVSFTRPRFGLFVVGNEAKLRTST 312
Query: 738 HWNNLV 743
+WN +
Sbjct: 313 YWNQFI 318
>gi|67971578|dbj|BAE02131.1| unnamed protein product [Macaca fascicularis]
Length = 842
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 125/377 (33%), Positives = 186/377 (49%), Gaps = 60/377 (15%)
Query: 426 IDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHG-- 483
I + +++++ ++ K+ G +K +S I+ E+ ++C TLS SG LL G
Sbjct: 267 ISKVSKERQELASKIKEVQGRPQK----TQSIIILESHVICCTLSTSGGLLLESAFRGQG 322
Query: 484 ---FDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFK 540
F VI+DEA Q+ E TL PL C ++ LVGDP QLP TVIS A+ GY S+
Sbjct: 323 GVPFSCVIVDEAGQSCEIETLAPLIHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMA 382
Query: 541 RLQR-----------AGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDY-TTRD 588
R R + P+ L QYRMHP+ FPS Y+ L+ E + D
Sbjct: 383 RFCRLLEENVEHNMISRLPILQLTVQYRMHPDTCLFPSNYIYNRNLKTNRQTETIRCSSD 442
Query: 589 WHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAI 648
W F P+ FD+ +G E + + S+IN+ E+ V+ + KLI + S + I
Sbjct: 443 WP----FRPYLVFDVGDGSERR--DNDSYINVQEIKLVMEII-KLIKDKRKDVSFRNIGI 495
Query: 649 ISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRA-SDKKSIGFL 707
I+ Y+ Q Q+ + F + VD TVD QGR+KD I +CVRA S + SIGFL
Sbjct: 496 ITHYKAQKTMIQKDLDKEFDRKGPAEVD--TVDAFQGRQKDCVIVTCVRANSGQGSIGFL 553
Query: 708 ADYRRMNVGITRAKSSILVVGCAST-----------------------------LREDKH 738
A +R+NV ITRAK S+ ++G T L+E++H
Sbjct: 554 ASLQRLNVTITRAKYSLFILGHLRTLMQLLPRSFCVHVNHSPFFSPEPKYLHWALKENQH 613
Query: 739 WNNLVKSAEKQDCLFRV 755
WN L++ A+K+ + +
Sbjct: 614 WNQLIQDAQKRGAIIKT 630
>gi|357491677|ref|XP_003616126.1| DNA-binding protein SMUBP-2 [Medicago truncatula]
gi|355517461|gb|AES99084.1| DNA-binding protein SMUBP-2 [Medicago truncatula]
Length = 1046
Score = 181 bits (459), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 111/309 (35%), Positives = 170/309 (55%), Gaps = 8/309 (2%)
Query: 449 KDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLAT-G 507
K R + L+ A ++ T+S S L S+ ++IDEAA E + +PL G
Sbjct: 686 KVRHQVEKFCLSNASLILCTVS-SSIKLYSEEKSPVKFLVIDEAAMLKECESTIPLQLPG 744
Query: 508 CKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPS 567
L+GD QLPA V S +A+ +G S+F+RL +GY ML QYRMHP + FP
Sbjct: 745 LCHCILIGDERQLPALVKSKIADECEFGRSMFERLVTSGYKRHMLNVQYRMHPSISLFPC 804
Query: 568 REFYDEALEDGSDV--EDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDF 625
+EFYD + D V E Y + + E + + +SF +I +GKE Q S N+ EV
Sbjct: 805 KEFYDGKISDAVIVGKEKY-NKHFLEGKMYASYSFINIAKGKE-QFGRENSLKNMVEVAV 862
Query: 626 VLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGV-ESQKVVDITTVDGCQ 684
+ + L + + K + IISPY QV + QE+ K+ V ++ V + +VDG Q
Sbjct: 863 ISKILESLKHEFMRTKKKVSIGIISPYNAQVFEIQEKVKQYIAVSDTDFSVSVRSVDGFQ 922
Query: 685 GREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTL-REDKHWNNLV 743
G E+D+ I S VR+++ +GFL++ +R+NV ITRA+ + ++G A+TL D W N+V
Sbjct: 923 GGEEDIIIISTVRSNESGKVGFLSNRQRVNVAITRARYCLWILGNAATLINSDSVWRNVV 982
Query: 744 KSAEKQDCL 752
A+++DC
Sbjct: 983 LDAKRRDCF 991
>gi|332023768|gb|EGI63992.1| Putative helicase senataxin [Acromyrmex echinatior]
Length = 1939
Score = 181 bits (459), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 153/530 (28%), Positives = 248/530 (46%), Gaps = 59/530 (11%)
Query: 254 KENHNASQLEAIH---EGLLRK--AFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKG 308
KE+ N+ QLEA+ +++K IQGPPGTGK++ I+ L++ IL+ K
Sbjct: 1366 KEDLNSKQLEAVFRVTNAVIKKEAKLCFIQGPPGTGKSKVIVNLVAQILYGA---CQDKK 1422
Query: 309 GLREIKRGP-ELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVN 367
LR + P + E L R N++ I + P T + P++
Sbjct: 1423 SLRILICAPSNAAIDEIVIRLLHIRSTL--KQKRFNMVRIGRSESMHPKTKDISVPQI-- 1478
Query: 368 SSRRYRVRVL--VCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIV----RIGLKAHHSV 421
++R+ + + + +N+ D L +L I N + K V R L
Sbjct: 1479 -AKRHLINISKGIKTTNNNIED---LSILQAHINSFNAELGSIKNVQEEKRYSLNRKLFE 1534
Query: 422 NSVAIDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLN 481
+V + + K D K++ R D +L A I+ TLS + + L
Sbjct: 1535 TTVKYELMKSNKSIDEINSKERARYQRMSED----IVLQGANIIACTLSSCYTNQMESLF 1590
Query: 482 HG----FDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTS 537
G V I+DEA Q+ E TL+PL G + LVGDP QLPAT++S A+ LG S
Sbjct: 1591 GGHKERISVCIVDEATQSCEAETLIPLMLGVTTLVLVGDPNQLPATILSQRAKKLGLDQS 1650
Query: 538 LFKRLQ-----RAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEY 592
+F R+Q ++ P+ ML QYRM + +P+R FY L++ +D Y
Sbjct: 1651 VFSRIQNVFASQSNNPIIMLDMQYRMEYAISYWPNRYFYGGKLKNATD-----------Y 1699
Query: 593 RCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLI--SMYPQLKSSSQLAIIS 650
R PF + + + +Q S N E +FV + + ++ + + ++ L +++
Sbjct: 1700 RMKFPFHAYRVLDHNFTQNYDKFS--NTTEAEFVANIIYTMLKCAKWESTSTTITLGVLT 1757
Query: 651 PYRHQ----VKQFQERFKETFGVESQKV-VDITTVDGCQGREKDVAIFSCVRASDKKSIG 705
PY +Q + + E+ +K+ ++ TVDG QG+E+DV I SCVR+S IG
Sbjct: 1758 PYNNQRTLVLNKINEKISSVPDDTKKKISFEVNTVDGFQGQERDVIIMSCVRSS---GIG 1814
Query: 706 FLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRV 755
FL+D +R+ V +TRAK S+++ G T +DK W L+ A + L R+
Sbjct: 1815 FLSDKQRLCVALTRAKHSLILCGNFRTFMKDKMWKALLTDARNRGILCRM 1864
>gi|387595933|gb|EIJ93556.1| hypothetical protein NEPG_01898 [Nematocida parisii ERTm1]
Length = 698
Score = 181 bits (459), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 116/310 (37%), Positives = 175/310 (56%), Gaps = 37/310 (11%)
Query: 459 LNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPV 518
+N+ +V STLS SGSA ++ N FDVVIIDEA Q++EP++++P+ V LVGDP
Sbjct: 382 MNKVRLVFSTLSMSGSATVT--NMMFDVVIIDEACQSIEPSSIIPMQNSLSHVILVGDPK 439
Query: 519 QLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDG 578
QLPATV+S +++ SLF+RL P+ ML TQYRMH ++ FPS+ FY+ L +G
Sbjct: 440 QLPATVLSGISK---LSISLFERLSTVISPI-MLTTQYRMHNKISHFPSKAFYNGQLING 495
Query: 579 SDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYP 638
+ P +F D++ + Q + S N E+ + L +++ Y
Sbjct: 496 LSLNSVL-----------PIAFVDVNGMEIKQ---NRSICNQTELCTIKKLLPHVMNKY- 540
Query: 639 QLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRA 698
KS+ AII+PY+ Q++ T + + +TTVDG QG+EKD I S VR
Sbjct: 541 --KSA---AIITPYKE-----QQKIISTDSTIVKSGITVTTVDGFQGQEKDCIIISTVRT 590
Query: 699 SDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLF---RV 755
S +IGFL+D RRMNV +TRAK +++VVG L +++ WN+ + C++ RV
Sbjct: 591 S---AIGFLSDCRRMNVALTRAKYTVIVVGSIKLLSKNEFWNDFIIYLYNISCVYTCERV 647
Query: 756 SKPYASFFSD 765
+ A+ +D
Sbjct: 648 IQLLATEITD 657
>gi|356537819|ref|XP_003537422.1| PREDICTED: uncharacterized ATP-dependent helicase C29A10.10c-like
[Glycine max]
Length = 925
Score = 181 bits (459), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 105/300 (35%), Positives = 163/300 (54%), Gaps = 6/300 (2%)
Query: 457 AILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLAT-GCKQVFLVG 515
+++ +I C+ + S + L + + ++IDEAAQ E + +PL G V L+G
Sbjct: 567 CLMSARLIFCT--AASSTKLFADGMTPVEFLVIDEAAQLKECESTIPLQLPGLHHVILIG 624
Query: 516 DPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEAL 575
D QLPA V S V++ YG SLF+RL G+ +L QYRMHP + FP++EFY++ L
Sbjct: 625 DEKQLPAVVKSQVSQEAEYGRSLFERLVSLGHKKHLLNVQYRMHPSISLFPNKEFYEKQL 684
Query: 576 EDGSDVEDYT-TRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLI 634
D V + + R + E + + +SF +I +GKE P G W N+ E V + L
Sbjct: 685 SDSPFVREVSYNRHFLEGKMYDSYSFINIAKGKEKMPRGGHGWKNMVEAAAVCKIIESLE 744
Query: 635 SMYPQLKSSSQLAIISPYRHQVKQFQERF-KETFGVESQKVVDITTVDGCQGREKDVAIF 693
+ + + IISPY QV + QER ++ + V + +VDG QG E+D+ I
Sbjct: 745 NEFFSTGKKVSIGIISPYNAQVYEIQERITRQNLVSDPNFSVSVRSVDGFQGGEEDIIII 804
Query: 694 SCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKH-WNNLVKSAEKQDCL 752
S VR++ IGFL + +R NV +TRA+ + ++G +TL D W NLV A+++ C
Sbjct: 805 STVRSNKNGKIGFLDNRQRANVALTRARYCLWILGNENTLSSDYSLWRNLVNDAKERGCF 864
>gi|449685514|ref|XP_002161143.2| PREDICTED: regulator of nonsense transcripts 1-like [Hydra
magnipapillata]
Length = 1153
Score = 181 bits (459), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 127/403 (31%), Positives = 200/403 (49%), Gaps = 43/403 (10%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNS-VAIDHLVEQK 433
++LVCAPSN A+D++ ++ TG+ K+VR+ K+ +++S V L Q
Sbjct: 534 QILVCAPSNIAVDQLTEKIHKTGL----------KVVRLAAKSREAIDSPVGFLALHNQV 583
Query: 434 RD-DSAADKQKHGATRKDRDSIRSA---------------ILNEAVIVCSTLSFSGSALL 477
R+ DS + QK + D+ + S+ +L A ++C+T +G L
Sbjct: 584 RNMDSMPELQKLQQLKDDQGELSSSDEKRYKTLKTSAEKELLQHADVICTTCIGAGDPRL 643
Query: 478 SKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTS 537
F V+IDE+ QA EP +VP+ G KQ+ LVGD QL V+ A G S
Sbjct: 644 RVAKLRFRCVLIDESTQATEPECMVPIVHGTKQLVLVGDHCQLGPVVMCKKAASAGLSQS 703
Query: 538 LFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR--DWHEYRCF 595
LF+RL G L+ QYRMHP + FPS FYD L++G V + + D+
Sbjct: 704 LFERLVVLGIRPIRLQVQYRMHPSLSEFPSNLFYDGTLQNGVTVAERSQPGVDFPWPVGD 763
Query: 596 GPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLI--SMYPQLKSSSQLAIISPYR 653
P FF G+E + S++N E V + + + + P+ Q+ II+PY
Sbjct: 764 KPM-FFYATTGQEEISSSGTSYLNRTEAATVEKIATRFLRAGVKPE-----QMGIITPYE 817
Query: 654 HQ----VKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLAD 709
Q V Q F + + +++ +VD QGREKD I SC R+++ + IGFL D
Sbjct: 818 GQRAYIVAYMQ--FSGSLHSSLYQNIEVASVDAFQGREKDYIIMSCARSNEHQGIGFLKD 875
Query: 710 YRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
RR+NV +TR+K ++++G L + WN+L+ +++ L
Sbjct: 876 PRRLNVALTRSKYGLIIIGNPKVLSKQPLWNHLLNDYKEKRVL 918
>gi|391341257|ref|XP_003744947.1| PREDICTED: regulator of nonsense transcripts 1-like [Metaseiulus
occidentalis]
Length = 1137
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 133/408 (32%), Positives = 203/408 (49%), Gaps = 70/408 (17%)
Query: 376 VLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSV----------- 424
VLVCAPSN A+D++ ++ T + K+VR+ K+ ++NS
Sbjct: 486 VLVCAPSNIAVDQLTEKIHRTRL----------KVVRLCAKSREAINSPVSFLALHNQVR 535
Query: 425 -----AIDHLVEQKR---------DDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLS 470
A H+ E K+ + S+AD++++ R + +L A ++C T
Sbjct: 536 NMEVNASQHISELKKLQQLKDETGELSSADEKRY---RILKRLCERELLEAADVICCTCV 592
Query: 471 FSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAE 530
+G + L F ++IDE QA EP +VP+ G KQ+ LVGD QL V+ A
Sbjct: 593 GAGDPRI--LRFKFHSILIDECMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKGAA 650
Query: 531 HLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWH 590
G SLF+RL G L+ QYRMHP + FPS FY+ +L++G E
Sbjct: 651 RAGLSQSLFERLVVLGIRPLRLEVQYRMHPSLSEFPSNFFYEGSLQNGVYAE-------- 702
Query: 591 EYRCFG---PFS------FFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLK 641
E R G PF FF G+E A S++N E V K+++ + LK
Sbjct: 703 ERRLKGVDFPFPQPDKPMFFYCCNGQEEIAASGTSYLNRTEAALV----EKIVTRF--LK 756
Query: 642 SS---SQLAIISPYRHQVKQFQERFKETFGVESQKV---VDITTVDGCQGREKDVAIFSC 695
SS Q+ +I+PY Q + F ++ + G K+ +++ +VD QGREKD+ I SC
Sbjct: 757 SSVKPEQIGVITPYEGQ-RAFLVQYMQYSGSLHSKLYQDIEVASVDAFQGREKDLIIMSC 815
Query: 696 VRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLV 743
VR+++ + IGFL D RR+NV +TRA+ I++VG L + WN+L+
Sbjct: 816 VRSNEHQGIGFLNDPRRLNVALTRARYGIIIVGNPKVLSKQPLWNHLL 863
>gi|321253648|ref|XP_003192804.1| ATP-dependent RNA helicase of the SFI superfamily Nam7p
[Cryptococcus gattii WM276]
gi|317459273|gb|ADV21017.1| ATP-dependent RNA helicase of the SFI superfamily Nam7p
[Cryptococcus gattii WM276]
Length = 1097
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 129/407 (31%), Positives = 210/407 (51%), Gaps = 53/407 (13%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHL----- 429
+VLVCAPSN A+D + ++ TG+ K+VR+ K+ +++S ++D L
Sbjct: 498 QVLVCAPSNVAVDHLCEKIHQTGL----------KVVRLAAKSREALDS-SVDFLSLHSQ 546
Query: 430 ------------VEQKRDD----SAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSG 473
+ Q R+D S +D++K+ A + + ILN A ++C+T +G
Sbjct: 547 VANADTHHELQKLIQLRNDQGELSQSDERKYKALVR---ACEKDILNAADVICTTCVGAG 603
Query: 474 SALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLG 533
L+K F V+IDEA Q+ EP ++PL GCKQ LVGD QL +++ A G
Sbjct: 604 DPRLAKFK--FRTVLIDEATQSAEPECMIPLVMGCKQAVLVGDHQQLGPVIMNKKAARAG 661
Query: 534 YGTSLFKRLQRAG-YPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDW-HE 591
SLF+RL G +P++ L+ QYRMHP + F S FY+ L++G + ++
Sbjct: 662 LSQSLFERLVILGNHPIR-LQVQYRMHPCLSEFSSNLFYEGTLQNGVTAPERLRKNVDFP 720
Query: 592 YRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSS---SQLAI 648
+ FF + G E + S++N E V K+++ + KS +Q+ +
Sbjct: 721 WPVADTPMFFHQNLGTEEISSSGTSFLNRTEASNV----EKMVTKF--FKSGVLPNQIGV 774
Query: 649 ISPYRHQVKQFQERFKETFGVESQ---KVVDITTVDGCQGREKDVAIFSCVRASDKKSIG 705
I+PY Q + + + + G + K V++ +VD QGREKD I SCVR+++ + IG
Sbjct: 775 ITPYEGQ-RSYIASYMQLHGSLKKDLYKEVEVASVDAFQGREKDYIILSCVRSNEHQGIG 833
Query: 706 FLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
FL D RRMNV +TRAK ++++G L + W L+ +++ C
Sbjct: 834 FLNDPRRMNVALTRAKYGVVILGNPKVLSKHPLWLYLLSHYKEKGCF 880
>gi|18202669|sp|Q98TR3.1|RENT1_FUGRU RecName: Full=Putative regulator of nonsense transcripts 1;
AltName: Full=ATP-dependent helicase RENT1
gi|13161880|emb|CAC33025.1| hypothetical protein [Takifugu rubripes]
Length = 1097
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 134/424 (31%), Positives = 221/424 (52%), Gaps = 47/424 (11%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + SR+ VLVCAPSN A+D++ ++ TG+ K+VR
Sbjct: 476 PGTGKTVTSATIVYHLSRQGNGPVLVCAPSNIAVDQLTEKIDKTGL----------KVVR 525
Query: 413 IGLKAHHSVNSVA-----------IDHL-----VEQKRDD----SAADKQKHGATRKDRD 452
+ K+ ++ S +D + ++Q +D+ S+AD++++ A + R
Sbjct: 526 LCAKSREAIESPVSFLALHNQISNMDSMPELQKLQQLKDETGELSSADEKRYRALK--RT 583
Query: 453 SIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVF 512
+ R ++N VI C+ + +G L+K+ F ++IDE+ QA EP + P+ G KQ+
Sbjct: 584 AERELLMNADVIWCTCVR-AGDPRLAKMQ--FRSILIDESTQATEPKCIGPVELGAKQLI 640
Query: 513 LVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYD 572
L G+ + V+ A G SLF+RL G L+ QYRMHP + +FPS FY+
Sbjct: 641 L-GEITASWSCVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYE 699
Query: 573 EALEDGSDVEDYTTR--DWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
+L++G D + D+ + P FF + +G+E + S++N E V +
Sbjct: 700 GSLQNGVTAGDRIKKGFDFQWPQPEKPM-FFYVTQGQEEIASSGTSYLNRTEAANVEKIT 758
Query: 631 HKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKV--VDITTVDGCQGREK 688
+L+ + Q+ II+PY Q + + ++ + G K+ V+I +VD QGREK
Sbjct: 759 TRLLKAGAK---PDQIGIITPYEGQ-RSYLVQYMQFSGSLHTKLYQVEIASVDAFQGREK 814
Query: 689 DVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEK 748
D I SCVRA++ + IGFL D RR+NV +TRAK +++VG L + WNNL+ + ++
Sbjct: 815 DFIILSCVRANEHQGIGFLNDPRRLNVALTRAKYGVIIVGNPKALSKQPLWNNLLNNYKE 874
Query: 749 QDCL 752
Q L
Sbjct: 875 QKVL 878
>gi|402466738|gb|EJW02168.1| hypothetical protein EDEG_03389 [Edhazardia aedis USNM 41457]
Length = 1260
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 114/297 (38%), Positives = 168/297 (56%), Gaps = 29/297 (9%)
Query: 455 RSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLV 514
RS I+ + I+CSTLS S L + N D+VIIDEA Q +E + L+PL K++ LV
Sbjct: 961 RSRIILRSDIICSTLSASAMENLIEDNLKIDMVIIDEACQCIETSALIPLKYNPKKLILV 1020
Query: 515 GDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEA 574
GDP QLP TVIS SLF+RL R YPV +LKTQYRM ++ +FP+ +FY
Sbjct: 1021 GDPQQLPPTVISNTR---LLEISLFERLSRY-YPVHILKTQYRMTSDIVAFPNLQFYRNQ 1076
Query: 575 LEDGSDVEDYTTRDWHEYRCFGPF-------SFFDIHEGKESQPAGSGSWINIDEVDFVL 627
L T + E R GPF SF +I +G E Q + S+ N+ E ++
Sbjct: 1077 L---------ITPKFLEQRK-GPFALLLKSISFINI-QGTEKQ-GDTNSFYNVKEEKAIV 1124
Query: 628 LLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGRE 687
+ + L S ++ + + IISPY+ Q+ E +++ +V+I TVD QG+E
Sbjct: 1125 RIVNYLAS---KIHLNKNIGIISPYKKQILHIIEEYRKICKANLTDLVEINTVDAFQGQE 1181
Query: 688 KDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVK 744
KD+ I S VR+ + +GF+ D RR+NV +TRA+ +I+++G A+ L DK W L++
Sbjct: 1182 KDIIILSTVRS---EKLGFVLDIRRLNVALTRARFNIIILGNANLLETDKTWKALIQ 1235
Score = 44.3 bits (103), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 258 NASQLEAIHEGLLRKA-FVLIQGPPGTGKTQTILGLLSAIL 297
N Q EAI K LIQGPPGTGKT TILG+L I
Sbjct: 749 NWYQAEAISSCFSTKTQITLIQGPPGTGKTTTILGILQTIF 789
>gi|58264876|ref|XP_569594.1| ATP dependent helicase [Cryptococcus neoformans var. neoformans
JEC21]
gi|57225826|gb|AAW42287.1| ATP dependent helicase, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 1090
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 131/408 (32%), Positives = 211/408 (51%), Gaps = 55/408 (13%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHL----- 429
+VLVCAPSN A+D + ++ TG+ K+VR+ K+ +++S ++D L
Sbjct: 498 QVLVCAPSNVAVDHLCEKIHQTGL----------KVVRLAAKSREALDS-SVDFLSLHSQ 546
Query: 430 ------------VEQKRDD----SAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSG 473
+ Q R+D S +D++K+ A K + ILN A ++C+T +G
Sbjct: 547 VANADTHHELQKLIQLRNDQGELSQSDERKYKALVK---ACEKDILNAADVICTTCVGAG 603
Query: 474 SALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLG 533
L+K F V+IDEA Q+ EP ++PL GCKQ LVGD QL +++ A G
Sbjct: 604 DPRLAKFK--FRTVLIDEATQSAEPECMIPLVMGCKQAVLVGDHQQLGPVIMNKKAARAG 661
Query: 534 YGTSLFKRLQRAG-YPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR--DWH 590
SLF+RL G +P++ L+ QYRMHP + F S FY+ L++G + + D+
Sbjct: 662 LSQSLFERLVILGNHPIR-LQVQYRMHPCLSEFSSNLFYEGTLQNGVTAPERLRKHVDFP 720
Query: 591 EYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSS---SQLA 647
P FF + G E + S++N E V K+++ + KS +Q+
Sbjct: 721 WPVADTPM-FFHQNLGTEEISSSGTSFLNRTEASNV----EKMVTKF--FKSGVLPNQIG 773
Query: 648 IISPYRHQVKQFQERFKETFGVESQ---KVVDITTVDGCQGREKDVAIFSCVRASDKKSI 704
+I+PY Q + + + + G + K V++ +VD QGREKD I SCVR+++ + I
Sbjct: 774 VITPYEGQ-RSYIASYMQLHGSLKKDLYKEVEVASVDAFQGREKDYIILSCVRSNEHQGI 832
Query: 705 GFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
GFL D RR+NV +TRAK ++++G L + W L+ +++ C
Sbjct: 833 GFLNDPRRLNVALTRAKYGVVILGNPKVLSKHPLWLYLLSHYKEKGCF 880
>gi|134109641|ref|XP_776499.1| hypothetical protein CNBC4250 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50259177|gb|EAL21852.1| hypothetical protein CNBC4250 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1089
Score = 180 bits (457), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 131/408 (32%), Positives = 211/408 (51%), Gaps = 55/408 (13%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHL----- 429
+VLVCAPSN A+D + ++ TG+ K+VR+ K+ +++S ++D L
Sbjct: 498 QVLVCAPSNVAVDHLCEKIHQTGL----------KVVRLAAKSREALDS-SVDFLSLHSQ 546
Query: 430 ------------VEQKRDD----SAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSG 473
+ Q R+D S +D++K+ A K + ILN A ++C+T +G
Sbjct: 547 VANADTHHELQKLIQLRNDQGELSQSDERKYKALVK---ACEKDILNAADVICTTCVGAG 603
Query: 474 SALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLG 533
L+K F V+IDEA Q+ EP ++PL GCKQ LVGD QL +++ A G
Sbjct: 604 DPRLAKFK--FRTVLIDEATQSAEPECMIPLVMGCKQAVLVGDHQQLGPVIMNKKAARAG 661
Query: 534 YGTSLFKRLQRAG-YPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR--DWH 590
SLF+RL G +P++ L+ QYRMHP + F S FY+ L++G + + D+
Sbjct: 662 LSQSLFERLVILGNHPIR-LQVQYRMHPCLSEFSSNLFYEGTLQNGVTAPERLRKHVDFP 720
Query: 591 EYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSS---SQLA 647
P FF + G E + S++N E V K+++ + KS +Q+
Sbjct: 721 WPVADTPM-FFHQNLGTEEISSSGTSFLNRTEASNV----EKMVTKF--FKSGVLPNQIG 773
Query: 648 IISPYRHQVKQFQERFKETFGVESQ---KVVDITTVDGCQGREKDVAIFSCVRASDKKSI 704
+I+PY Q + + + + G + K V++ +VD QGREKD I SCVR+++ + I
Sbjct: 774 VITPYEGQ-RSYIASYMQLHGSLKKDLYKEVEVASVDAFQGREKDYIILSCVRSNEHQGI 832
Query: 705 GFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
GFL D RR+NV +TRAK ++++G L + W L+ +++ C
Sbjct: 833 GFLNDPRRLNVALTRAKYGVVILGNPKVLSKHPLWLYLLSHYKEKGCF 880
>gi|163915642|gb|AAI57562.1| LOC100135270 protein [Xenopus (Silurana) tropicalis]
Length = 587
Score = 180 bits (457), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 126/382 (32%), Positives = 200/382 (52%), Gaps = 30/382 (7%)
Query: 376 VLVCAPSNSALDEIVLRL-LNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQKR 434
V +CA S A+D V L L+ IR N+ S P++ ++ L ++
Sbjct: 10 VRLCAKSREAIDSPVSFLALHNQIR--NMES-MPELQKL-------------QQLKDETG 53
Query: 435 DDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQ 494
+ S+AD++++ A + R + R ++N VI C+ + +G L+K+ F ++IDE+ Q
Sbjct: 54 ELSSADEKRYRALK--RTAERELLMNADVICCTCVG-AGDPRLAKMQ--FRSILIDESTQ 108
Query: 495 AVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKT 554
A EP +VP+ G KQ+ LVGD QL V+ A G SLF+RL G L+
Sbjct: 109 ATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQV 168
Query: 555 QYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR--DWHEYRCFGPFSFFDIHEGKESQPA 612
QYRMHP + +FPS FY+ +L++G D + D+ + P FF + +G+E +
Sbjct: 169 QYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPM-FFYVTQGQEEIAS 227
Query: 613 GSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQE--RFKETFGVE 670
S++N E V + KL+ Q+ II+PY Q + +F + +
Sbjct: 228 SGTSYLNRTEAANVEKITTKLLKAG---AKPDQIGIITPYEGQRSYLVQYMQFSGSLHTK 284
Query: 671 SQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCA 730
+ V+I +VD QGREKD I SCVRA++ + IGFL D RR+NV +TRA+ +++VG
Sbjct: 285 LYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNP 344
Query: 731 STLREDKHWNNLVKSAEKQDCL 752
L + WN+L+ ++Q L
Sbjct: 345 KALSKQPLWNHLLNYYKEQKVL 366
>gi|300122269|emb|CBK22842.2| unnamed protein product [Blastocystis hominis]
Length = 586
Score = 180 bits (457), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 129/407 (31%), Positives = 205/407 (50%), Gaps = 54/407 (13%)
Query: 374 VRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIG-------LKAHHS---VNS 423
+R+L+ APSN+A+D ++ +L+ + +N P ++R+G +K H +
Sbjct: 181 LRILIAAPSNAAVDTLLEKLVISIPSTQN-----PNVIRLGRVGGDASVKDHPERAFLQK 235
Query: 424 VAIDHLVEQK----RDDSA--ADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALL 477
+D +V+++ R D+A + G RK + +S ++N VIV + + S + +
Sbjct: 236 YELDGMVDRQIKKFRSDAANRLSTETDGYLRKKFE--QSTLMNARVIVSTLATSSNTQVT 293
Query: 478 SKLNHG--FDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYG 535
S L+ G +VI+DEA Q EP L+PL LVGD QL AT+++P + LGYG
Sbjct: 294 SFLSQGTQLPIVIVDEATQCTEPHCLIPLCVKPSLFILVGDSHQLAATILNPTIKRLGYG 353
Query: 536 TSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALED--------------GSDV 581
SLF+RL +P L+ Q+RM P + +P++ Y L D S V
Sbjct: 354 KSLFERLVLNKFPRLSLRIQFRMTPSISLWPNQYVYQSQLIDSKRVRQPSFCYIFQNSSV 413
Query: 582 EDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLK 641
Y D E F FD +G ++ S+ N+ E + V+ L H+L P
Sbjct: 414 PSYAFLDVPEVLLFE----FDAIQGICAK--HRSSFHNLREAEIVVDLIHRLFLQLPPST 467
Query: 642 SSSQLAIISPYRHQVKQFQERFKETFGV----ESQKVVDITTVDGCQGREKDVAIFSCVR 697
+ +ISPY QV Q + R + K+V I++VD QG E D+ I SCVR
Sbjct: 468 IGYSIGVISPYTAQVHQIRNRMNSVIDCAQFEKDLKLVKISSVDAFQGGESDIIILSCVR 527
Query: 698 ASDK-----KSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHW 739
++ K KS+GFL++ +R+NV +TRAK ++ +VG A L+ + HW
Sbjct: 528 STLKDAQAIKSVGFLSNLQRLNVALTRAKQALWIVGNAQHLQINFHW 574
>gi|255570463|ref|XP_002526190.1| ATP binding protein, putative [Ricinus communis]
gi|223534494|gb|EEF36194.1| ATP binding protein, putative [Ricinus communis]
Length = 782
Score = 180 bits (457), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 109/300 (36%), Positives = 168/300 (56%), Gaps = 7/300 (2%)
Query: 457 AILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLA-TGCKQVFLVG 515
+ N ++ C+T S L +K ++IDEAAQ E + +PL +G LVG
Sbjct: 267 CLANACLLFCTT--SSSIKLHTKRMTPLRFLVIDEAAQLKECESTIPLQLSGLHHAILVG 324
Query: 516 DPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEAL 575
D QL A V S ++E G+G SLF+RL + GY +L QYRMHP + P+REFY + +
Sbjct: 325 DERQLSAMVNSKISEEAGFGRSLFERLVKLGYKKHLLNIQYRMHPSISLLPNREFYGKQI 384
Query: 576 EDGSDVEDYT-TRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLI 634
D +V++ + R + E + +SF +I GKE + S N+ EV V + L
Sbjct: 385 LDALNVKEISHERRFLEGNMYSSYSFINISHGKE-EFDEFRSLRNMVEVAVVSDIVANLF 443
Query: 635 SMYPQLKSSSQLAIISPYRHQVKQFQERFKE-TFGVESQKVVDITTVDGCQGREKDVAIF 693
S + K + IISPY+ QV QE+ + G +++ V++ ++DG QG E+DV IF
Sbjct: 444 SEFISTKKKVSIGIISPYKAQVHAIQEKIGNYSSGSDAEFSVNVRSIDGFQGGEEDVIIF 503
Query: 694 SCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKH-WNNLVKSAEKQDCL 752
S VR ++K S+GFL++ +R NV +TRA+ + ++G A+TL + W LV AE++ C
Sbjct: 504 STVRCNNKGSVGFLSNCQRANVALTRARYCLWILGNAATLNKSGSIWKKLVADAERRRCF 563
>gi|351713804|gb|EHB16723.1| Regulator of nonsense transcripts 1 [Heterocephalus glaber]
Length = 1068
Score = 180 bits (457), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 128/395 (32%), Positives = 207/395 (52%), Gaps = 45/395 (11%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + +R+ VLVCAPSN A+D++ ++ TG+ K+VR
Sbjct: 446 PGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGL----------KVVR 495
Query: 413 IGLKAHHSVNSVA-----------IDHL-----VEQKRDD----SAADKQKHGATRKDRD 452
+ K+ +++S +D + ++Q +D+ S+AD++++ A + R
Sbjct: 496 LCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSADEKRYRALK--RT 553
Query: 453 SIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVF 512
+ R ++N VI C+ + +G L+K+ F ++IDE+ QA EP +VP+ G KQ+
Sbjct: 554 AERELLMNADVICCTCVG-AGDPRLAKMQ--FRSILIDESTQATEPECMVPVVLGAKQLI 610
Query: 513 LVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYD 572
LVGD QL V+ A G SLF+RL G L+ QYRMHP + +FPS FY+
Sbjct: 611 LVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYE 670
Query: 573 EALEDGSDVEDYTTR--DWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
+L++G D + D+ + P FF + +G+E + S++N E V +
Sbjct: 671 GSLQNGVTAADRVKKGFDFQWPQPDKPM-FFYVTQGQEEIASSGTSYLNRTEAANVEKIT 729
Query: 631 HKLISMYPQLKSSSQLAIISPYRHQVKQFQE--RFKETFGVESQKVVDITTVDGCQGREK 688
KL+ + Q+ II+PY Q + +F + + + V+I +VD QGREK
Sbjct: 730 TKLLKAGAK---PDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREK 786
Query: 689 DVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSS 723
D I SCVRA++ + IGFL D RR+NV +TRA+ +
Sbjct: 787 DFIILSCVRANEHQGIGFLNDPRRLNVALTRARPA 821
>gi|428177002|gb|EKX45884.1| hypothetical protein GUITHDRAFT_159666 [Guillardia theta CCMP2712]
Length = 1030
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 132/431 (30%), Positives = 208/431 (48%), Gaps = 57/431 (13%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + SR +VLV APSN A+D + ++ TG+ K+VR
Sbjct: 490 PGTGKTVTSACIVYHLSRMGHGQVLVTAPSNVAVDHLTEKIHKTGL----------KVVR 539
Query: 413 IGLKAHHSVNS--------VAIDHL----------VEQKRDD----SAADKQKHGATRKD 450
+ K+ ++ S + HL ++Q + + S D++K+ ++
Sbjct: 540 MCAKSREAIGSSVEQLTLHYQVQHLDTSDKAEFRKLQQLKKELGELSTQDEKKYKQLKR- 598
Query: 451 RDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQ 510
+ +L A ++C+T +G A L+ F V++DE QA EP L+P+A G KQ
Sbjct: 599 --ATERELLMAADVICTTCVGAGDARLNGFR--FTKVLVDECTQATEPECLIPIAMGAKQ 654
Query: 511 VFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREF 570
+ LVGD QL V+ A G SLF+R+ G L+ QYRMHP + FPS F
Sbjct: 655 LVLVGDHCQLGPVVMCKKAAKAGLQQSLFERMVNLGVKPVRLQVQYRMHPILSEFPSNTF 714
Query: 571 YDEALEDGSDVEDYTTRDWHEYRCFGPFS----FFDIHEGKESQPAGSGSWINIDEVDFV 626
Y+ L++G + R H P + F I G E A S++N E V
Sbjct: 715 YEGTLQNGV---THAERHAHAIDFPWPVASKPMMFYISTGAEELSASGTSYLNRTEASNV 771
Query: 627 LLLFHKLISMYPQLKSS---SQLAIISPYRHQVKQFQERFKETFGVESQ--KVVDITTVD 681
K+++ + LK Q+ II+PY Q + + Q +++ +VD
Sbjct: 772 ----EKIVTRF--LKGGVVPEQIGIITPYEGQRAYIVQYMSRNGSLRKQLYNELEVASVD 825
Query: 682 GCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNN 741
QGREKD I SCVR+++ KSIGF+ + RR+NV +TRA+ ++++G L + WNN
Sbjct: 826 AFQGREKDFIILSCVRSNEGKSIGFVNNPRRLNVALTRARYGVVILGNPKVLAKQPLWNN 885
Query: 742 LVKSAEKQDCL 752
L+ ++ +CL
Sbjct: 886 LLCHFKQHECL 896
>gi|294896732|ref|XP_002775704.1| splicing endonuclease positive effector sen1, putative [Perkinsus
marinus ATCC 50983]
gi|239881927|gb|EER07520.1| splicing endonuclease positive effector sen1, putative [Perkinsus
marinus ATCC 50983]
Length = 674
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 114/303 (37%), Positives = 164/303 (54%), Gaps = 22/303 (7%)
Query: 458 ILNEAVIVCSTLS-FSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLAT-GCKQVFLVG 515
+L A +V TLS F S + S IIDEA QA+EP+ L+PL G K++ LVG
Sbjct: 342 LLGRARVVLGTLSSFGSSTITSNFVARDATCIIDEACQAIEPSALIPLKLRGVKRLVLVG 401
Query: 516 DPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEAL 575
DP QLPATV+S A+ L Y SLF+RL AG+ +L QYRM PE+ +F S+EFYD L
Sbjct: 402 DPQQLPATVVSMEAKALRYERSLFERLIGAGWKAHLLDEQYRMLPEIANFASKEFYDGRL 461
Query: 576 EDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLIS 635
+ + + R P F D G E + G S +N +E ++ K++
Sbjct: 462 KTAESCR-FPSSLGQPLR---PLLFLDSRLGSEQR--GGTSLVNTEEA----IIVGKMVE 511
Query: 636 MYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSC 695
K S + +++PYR Q + S ++ TVD QG+EKD+ I SC
Sbjct: 512 AVANRKLS--VGVVTPYRQQALLIRRTV-------SMSGAEVDTVDAYQGQEKDIIIMSC 562
Query: 696 VRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTL-REDKHWNNLVKSAEKQDCLFR 754
VR++ IGF+ADYRR+NV +TRAK ++ +VG A +L R K W +L+ ++ + L
Sbjct: 563 VRSNRDGGIGFVADYRRLNVSLTRAKYALWIVGNAESLGRSSKVWADLIHYCQEHESLVD 622
Query: 755 VSK 757
S+
Sbjct: 623 ASR 625
Score = 44.3 bits (103), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 223 PFKDLILSASEKSSGSQDQSWKIPGLLHEYIKENHNASQLEAIHEGL-LRKAFVLIQGPP 281
P +DL+++ S + S + + ++ + N +QL A+ + L+QGPP
Sbjct: 125 PLRDLLITPSVPVLRRTNTS----SITDDTVQGDLNQAQLRAVTSAADVSSPITLVQGPP 180
Query: 282 GTGKTQTILGLLSAILHAT 300
GTGKT+TI+ ++ A+L T
Sbjct: 181 GTGKTKTIVAMVKALLKTT 199
>gi|412990683|emb|CCO18055.1| ATP-dependent helicase NAM7 [Bathycoccus prasinos]
Length = 1020
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 128/405 (31%), Positives = 200/405 (49%), Gaps = 46/405 (11%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQKR 434
+V+V APSN A+D++ ++ TG+ K+VRI ++ VNS A++HL +
Sbjct: 501 QVIVAAPSNVAVDQLAEKIEKTGL----------KVVRIVARSREHVNS-AVEHLALHYQ 549
Query: 435 DDSAADKQKHGATRKD---RDSI------------------RSAILNEAVIVCSTLSFSG 473
A+K+K+G K +DSI + I+ A +VC T +G
Sbjct: 550 VQRIAEKEKNGQLAKLQRLKDSIGELSQEDEKRYYKALKKIENDIIQNADVVCVTAVGAG 609
Query: 474 SALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLG 533
L K + F V+ DE+ QA EP TL+P+ G KQV +VGD QL V A G
Sbjct: 610 DRRLEK--YRFRQVLFDESTQATEPETLIPIIMGAKQVVMVGDHCQLGPVVTCRSASRAG 667
Query: 534 YGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDG-SDVEDYTTRDWHEY 592
SLF+RL G L+ QYRMHP + FPS FY+ L++G ++ E + D +
Sbjct: 668 LSQSLFERLIFMGVQPIRLQVQYRMHPCLSEFPSNAFYEGTLQNGVTEAERADSEDVFPW 727
Query: 593 RCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLI--SMYPQLKSSSQLAIIS 650
C F G E A S++N E V + L+ + P+ ++ +++
Sbjct: 728 PCPSKPMLFWAQMGVEEMSASGYSYLNRGEAYAVEKIVTHLLQNGIAPE-----EIGVVT 782
Query: 651 PYRHQVKQFQERFKETFGVESQKV---VDITTVDGCQGREKDVAIFSCVRASDKKSIGFL 707
PY Q + + + GV + V++ +VD QGREK I +CVR++D++ IGFL
Sbjct: 783 PYEGQ-RAYVVNYLTRTGVLHPSIYQEVEVASVDAFQGREKQYIIVTCVRSNDRQGIGFL 841
Query: 708 ADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
D RR+NV +TRAK +++VG L + + ++++ CL
Sbjct: 842 NDPRRLNVALTRAKLGLMIVGNPKVLAKQPLFRDMLQHFRDNKCL 886
>gi|342320526|gb|EGU12466.1| ATP dependent helicase [Rhodotorula glutinis ATCC 204091]
Length = 1086
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 127/406 (31%), Positives = 206/406 (50%), Gaps = 51/406 (12%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVA--------- 425
+VLV APSN A+D++ ++ TG+ K+VR+ K+ ++ S
Sbjct: 509 QVLVAAPSNVAVDQLTEKIHQTGL----------KVVRVTAKSREALESSVSFLTLHAQV 558
Query: 426 --------IDHLVEQKRDD---SAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGS 474
+ L++ K++ S++D++K A + + IL A ++C+T G
Sbjct: 559 ANSDTHPELSKLIQLKQEQGELSSSDERKFKALTR---MVEKEILTNADVICATCVGCGD 615
Query: 475 ALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGY 534
L L F V+IDEA QA EP ++PL G KQ+ +VGD QL T+++ A G
Sbjct: 616 PRLKNLK--FRTVLIDEATQATEPECMIPLTFGVKQLVMVGDHSQLGPTIMNKKAARAGL 673
Query: 535 GTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR--DWHEY 592
SLF+RL G L+ QYRMHP + FPS FY+ L++G + + D+
Sbjct: 674 NQSLFERLILLGNRPIRLQVQYRMHPCLSEFPSNMFYEGTLQNGVTAPERLRKNVDFPWP 733
Query: 593 RCFGPFSFFDIHEGKESQPAGSGSWINIDE---VDFVLLLFHKLISMYPQLKSSSQLAII 649
+ P +F + G+E + S++N E V+ ++ F K M SQ+ II
Sbjct: 734 QPTTPM-YFHQNLGQEEISSSGTSFLNRTEASNVEKIVTRFFKAGVM------PSQIGII 786
Query: 650 SPYRHQVKQFQERFKETFGV---ESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGF 706
+PY Q + + + + G E K +++ +VD QGREKD I SCVR+++ + IGF
Sbjct: 787 TPYEGQ-RSYLVSYMQMNGSLKKELYKEIEVASVDAFQGREKDYVIMSCVRSNEHQGIGF 845
Query: 707 LADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
L D RR+NV +TRAK ++++G L + W+ L+ +++ CL
Sbjct: 846 LNDPRRLNVALTRAKYGLVILGNPKVLSKHALWHYLLTHYKEKKCL 891
>gi|237843993|ref|XP_002371294.1| ATP-dependent helicase, putative [Toxoplasma gondii ME49]
gi|211968958|gb|EEB04154.1| ATP-dependent helicase, putative [Toxoplasma gondii ME49]
Length = 1419
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 127/383 (33%), Positives = 195/383 (50%), Gaps = 34/383 (8%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQKR 434
++L A SN A D ++ L GIR VR+G + + AI L + R
Sbjct: 937 KILAVADSNVAADNLMEGLSARGIRS----------VRVGNGSESDLQEEAIADL-GRYR 985
Query: 435 DDSAADKQKHGATRKDRDSIRSAILNEAV----IVCSTLSFSGSALLSKLNHGFDVVIID 490
D + K + ++R A+ EA+ ++ +T SG + L F VIID
Sbjct: 986 DYV---RLKQNGMFGEAKTVRMALFREAIRRQPVIIATCVGSGHEMFDDLV--FSRVIID 1040
Query: 491 EAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGY-PV 549
E AQA+EP+ L+PLA GC+ L+GD QLP T++SP A G SL +R +G P+
Sbjct: 1041 EGAQAIEPSNLIPLAHGCRNFVLIGDHKQLPPTILSPEAAARGLDVSLLERFVGSGIAPI 1100
Query: 550 KMLKTQYRMHPEVRSFPSREFYDEALE-----DGS--DVEDYTTRDWHEYRCFGPFSFFD 602
++L Q RMHP + FP+ +FYD ++ DG+ V + H C S
Sbjct: 1101 QLLDEQRRMHPSIAYFPNLQFYDGKIQSRDVDDGNRPPVAGFRWPSQHSRVCLVDISAAG 1160
Query: 603 IHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQER 662
+ + SQ S N E+D ++ + + + L S Q+ +++PY Q + ++
Sbjct: 1161 LSGSETSQ---GTSKYNAAEIDPIIAILQSVANEGSVLPS--QIGVLTPYDAQKARLRKA 1215
Query: 663 FKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKS 722
ETF + +++ +VDG QG+EKD+ IFS VR++ + IGFL D RRMNV +TRAK
Sbjct: 1216 INETFVPPACYQIEVDSVDGFQGKEKDLIIFSAVRSNARGEIGFLRDPRRMNVMLTRAKR 1275
Query: 723 SILVVGCASTLREDK-HWNNLVK 744
++VVG TL DK +W ++
Sbjct: 1276 GVIVVGDQLTLWNDKTNWRPWIQ 1298
>gi|387593867|gb|EIJ88891.1| hypothetical protein NEQG_00710 [Nematocida parisii ERTm3]
Length = 698
Score = 179 bits (455), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 118/310 (38%), Positives = 177/310 (57%), Gaps = 37/310 (11%)
Query: 459 LNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPV 518
+N+ +V STLS SGSA ++ N FDVVIIDEA Q++EP++++P+ V LVGDP
Sbjct: 382 MNKVRLVFSTLSMSGSATVT--NMMFDVVIIDEACQSIEPSSIIPMQNSLSHVILVGDPK 439
Query: 519 QLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDG 578
QLPATV+S +++ SLF+RL P+ ML TQYRMH ++ FPS+ FY+ L +G
Sbjct: 440 QLPATVLSGISK---LSISLFERLSTVISPI-MLTTQYRMHNKISHFPSKAFYNGQLING 495
Query: 579 SDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYP 638
+ P +F D++ + Q + S N E+ + L +++ Y
Sbjct: 496 LSLNSVL-----------PIAFVDVNGMEIKQ---NRSICNQTELCTIKKLLPHVMNKY- 540
Query: 639 QLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRA 698
KS+ AII+PY+ Q K ++ V+S + +TTVDG QG+EKD I S VR
Sbjct: 541 --KSA---AIITPYKEQQKIISA---DSTIVKSG--ITVTTVDGFQGQEKDCIIISTVRT 590
Query: 699 SDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLF---RV 755
S +IGFL+D RRMNV +TRAK +++VVG L +++ WN+ + C++ RV
Sbjct: 591 S---AIGFLSDCRRMNVALTRAKYTVIVVGSIKLLSKNEFWNDFIIYLYNISCVYTCERV 647
Query: 756 SKPYASFFSD 765
+ A+ +D
Sbjct: 648 IQLLATEITD 657
>gi|145353141|ref|XP_001420883.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581119|gb|ABO99176.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 388
Score = 179 bits (455), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 125/351 (35%), Positives = 187/351 (53%), Gaps = 29/351 (8%)
Query: 445 GATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPL 504
GAT+ + + + A VC+T S SGS L ++N F V++DEA+Q EP LVPL
Sbjct: 37 GATKHEAYEAQLRAVRYAQAVCATCSGSGSDFLDRIN--FSAVMLDEASQVTEPMALVPL 94
Query: 505 ATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRS 564
A GC+Q+ LVGD QLP TV+S AE G SLF RL RAG +L TQ+RMHP +
Sbjct: 95 ANGCQQLVLVGDHKQLPPTVVSREAELAGMTLSLFDRLIRAGVKPYLLDTQFRMHPAISY 154
Query: 565 FPSREFYDEALEDGSDVEDYTTRDWHEYRCFG-PFSFF----DIHEGKESQPAGSGSWIN 619
FPS FY ++ G+ + + P +F D E ++ S+ N
Sbjct: 155 FPSLSFYKGLVKSGTPAAERPAPKGFAWPIPSVPIAFCPSPQDAMETNDNM-----SYSN 209
Query: 620 IDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKE---TFGVE---SQK 673
E + V+ + L+ +L+ + + I++PY QV+ + + GV+ +
Sbjct: 210 KVEAERVMKILTDLLQAK-ELRECN-IGIVTPYASQVRLIRSMLRARGVRTGVDRETGEA 267
Query: 674 VVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTL 733
V++++VDG QGREK++ I S VRA++ +IGF+AD RR NV +TRA+ ++VVG ASTL
Sbjct: 268 GVEVSSVDGYQGREKELMIVSTVRANNLNTIGFVADARRCNVTLTRARRGVIVVGHASTL 327
Query: 734 REDKH-WNNLVKSAEKQDCLFRVSKPYASFFSDENLESMRKNATTDNVQGA 783
D+ W V+ +K V E++E++R A +VQ A
Sbjct: 328 SRDRRTWGPWVRWVQKSGLTLGVKG------RREDIEAVR--AIEADVQNA 370
>gi|221483749|gb|EEE22061.1| conserved hypothetical protein [Toxoplasma gondii GT1]
Length = 1431
Score = 179 bits (455), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 127/383 (33%), Positives = 195/383 (50%), Gaps = 34/383 (8%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQKR 434
++L A SN A D ++ L GIR VR+G + + AI L + R
Sbjct: 937 KILAVADSNVAADNLMEGLSARGIRS----------VRVGNGSESDLQEEAIADL-GRYR 985
Query: 435 DDSAADKQKHGATRKDRDSIRSAILNEAV----IVCSTLSFSGSALLSKLNHGFDVVIID 490
D + K + ++R A+ EA+ ++ +T SG + L F VIID
Sbjct: 986 DYV---RLKQNGMFGEAKTVRMALFREAIRRQPVIIATCVGSGHEMFDDLV--FSRVIID 1040
Query: 491 EAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGY-PV 549
E AQA+EP+ L+PLA GC+ L+GD QLP T++SP A G SL +R +G P+
Sbjct: 1041 EGAQAIEPSNLIPLAHGCRNFVLIGDHKQLPPTILSPEAAARGLDVSLLERFVGSGIAPI 1100
Query: 550 KMLKTQYRMHPEVRSFPSREFYDEALE-----DGS--DVEDYTTRDWHEYRCFGPFSFFD 602
++L Q RMHP + FP+ +FYD ++ DG+ V + H C S
Sbjct: 1101 QLLDEQRRMHPSIAYFPNLQFYDGKIQSRDVDDGNRPPVAGFRWPSQHSRVCLVDISAAG 1160
Query: 603 IHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQER 662
+ + SQ S N E+D ++ + + + L S Q+ +++PY Q + ++
Sbjct: 1161 LSGSETSQ---GTSKYNAAEIDPIIAILQSVANEGSVLPS--QIGVLTPYDAQKARLRKA 1215
Query: 663 FKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKS 722
ETF + +++ +VDG QG+EKD+ IFS VR++ + IGFL D RRMNV +TRAK
Sbjct: 1216 INETFVPPACYQIEVDSVDGFQGKEKDLIIFSAVRSNARGEIGFLRDPRRMNVMLTRAKR 1275
Query: 723 SILVVGCASTLREDK-HWNNLVK 744
++VVG TL DK +W ++
Sbjct: 1276 GVIVVGDQLTLWNDKTNWRPWIQ 1298
>gi|336379199|gb|EGO20355.1| hypothetical protein SERLADRAFT_477852 [Serpula lacrymans var.
lacrymans S7.9]
Length = 376
Score = 179 bits (455), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 120/311 (38%), Positives = 164/311 (52%), Gaps = 42/311 (13%)
Query: 458 ILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDP 517
I+++A ++C+T S S L+ ++ F VV +DEA+ + EPA+L+PL G + V L+GD
Sbjct: 9 IVSQADVICTTCVASASVALNVVD--FPVVFLDEASMSTEPASLIPLMKGSQHVALIGDH 66
Query: 518 VQLPATVISPVAEHLGYGTSLFKRLQRAGY-PVKMLKTQYRMHPEVRSFPSREFYDEALE 576
QLP + S A+ G G SLF+RL G P ML QYRMHP + FPS EFY+ +L+
Sbjct: 67 KQLPPIITSREAKLKGLGISLFERLAEEGVVPSIMLDIQYRMHPTISHFPSLEFYNFSLQ 126
Query: 577 DGS-DVEDYTTRDWHEYRCFGPFS----------------FFDIHEGKESQPAGSGSWIN 619
+G+ D TT P S F D H G ES A S +N
Sbjct: 127 NGTVDASGNTTPSL-----LPPLSSHLEVNLETGNRPSVVFLD-HTGSES--ARDRSRVN 178
Query: 620 IDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVK----------QFQERFKETFG- 668
+E + V + L+ LK + II+PY Q+ ++ RFK G
Sbjct: 179 WNEANIVCSVVEDLLLQNEHLKGK-DIGIIAPYAAQISLLTRLLNTNAKYHTRFKNALGD 237
Query: 669 --VESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILV 726
V ++I TVDG +GREK+V IFS VR + IGFLAD RR+NVG+TRAK + V
Sbjct: 238 HRVMQLSNIEIKTVDGFEGREKEVIIFSTVRNNTSGYIGFLADRRRLNVGLTRAKRGLFV 297
Query: 727 VGCASTLREDK 737
VG STL+ K
Sbjct: 298 VGSISTLKAGK 308
>gi|328353104|emb|CCA39502.1| Regulator of nonsense transcripts 1 [Komagataella pastoris CBS
7435]
Length = 967
Score = 179 bits (455), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 145/453 (32%), Positives = 225/453 (49%), Gaps = 50/453 (11%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + ++ + +VLV A SN A+D + +L + G+ K+VR
Sbjct: 425 PGTGKTVTSATIVYHLAKSKKKKVLVTASSNIAVDHLASKLEDIGL----------KVVR 474
Query: 413 IGLKAHHSVNSVAIDHLVEQKRDDSAADK----------QKHGATRKDRD-------SIR 455
+ ++ +V S AIDHL + + + ++KD +
Sbjct: 475 VTARSRENVES-AIDHLSLSSLVSNTNNPVLKKLLKKKDELGSLSKKDMNIYISQTKKAE 533
Query: 456 SAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVG 515
+ IL EA +VC T S +G L+ + F V+IDE+ Q EP +L+P+ G KQV LVG
Sbjct: 534 AEILAEAHVVCCTCSGAGDKRLANIK--FPYVLIDESTQPSEPESLIPIVKGAKQVILVG 591
Query: 516 DPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEAL 575
D QL ++ A G SLF+RL + G+ L+ QYRMHP + FPS FYD +L
Sbjct: 592 DHQQLGPVILHNGAAKAGLRQSLFERLIKLGHIPIRLEVQYRMHPSLSEFPSNMFYDGSL 651
Query: 576 EDG-SDVEDYTTRDWHEYRCFG-PFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKL 633
++G S + R + G P F+ + +E +G+ S++N E + +L
Sbjct: 652 QNGVSHEQRLIRRSSFPWPAPGIPLLFWSSYGTEEISISGT-SFLNRSEAMNCEKIISRL 710
Query: 634 IS--MYPQLKSSSQLAIISPYRHQVKQFQERFKETFGV----ESQKVVDITTVDGCQGRE 687
+S + P Q+ +I+PY+ Q + + ++ G E + V++ +VD QGRE
Sbjct: 711 LSEGIKPH-----QIGVITPYQGQ-RDYIVQYLLMNGAHPDREIYQDVEVASVDAFQGRE 764
Query: 688 KDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAE 747
KD IFSC R++ +IGFL D RR+NV ITRAK + V+G TL++D WN L+
Sbjct: 765 KDFIIFSCTRSNHTNTIGFLKDARRLNVAITRAKYGLFVLGNIKTLQKDPLWNRLLVHFR 824
Query: 748 KQDCLFRVSKPYASF-FSDENLESMRKNATTDN 779
+ L V SF +LES R +T +N
Sbjct: 825 DKGAL--VEGRLDSFQLYTASLESARFKSTAEN 855
>gi|254571547|ref|XP_002492883.1| ATP-dependent RNA helicase of the SFI superfamily, required for
nonsense mediated mRNA decay and for [Komagataella
pastoris GS115]
gi|238032681|emb|CAY70704.1| ATP-dependent RNA helicase of the SFI superfamily, required for
nonsense mediated mRNA decay and for [Komagataella
pastoris GS115]
Length = 941
Score = 179 bits (455), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 145/452 (32%), Positives = 223/452 (49%), Gaps = 48/452 (10%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + ++ + +VLV A SN A+D + +L + G+ K+VR
Sbjct: 399 PGTGKTVTSATIVYHLAKSKKKKVLVTASSNIAVDHLASKLEDIGL----------KVVR 448
Query: 413 IGLKAHHSVNSVAIDHLVEQKRDDSAADK----------QKHGATRKDRD-------SIR 455
+ ++ +V S AIDHL + + + ++KD +
Sbjct: 449 VTARSRENVES-AIDHLSLSSLVSNTNNPVLKKLLKKKDELGSLSKKDMNIYISQTKKAE 507
Query: 456 SAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVG 515
+ IL EA +VC T S +G L+ + F V+IDE+ Q EP +L+P+ G KQV LVG
Sbjct: 508 AEILAEAHVVCCTCSGAGDKRLANIK--FPYVLIDESTQPSEPESLIPIVKGAKQVILVG 565
Query: 516 DPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEAL 575
D QL ++ A G SLF+RL + G+ L+ QYRMHP + FPS FYD +L
Sbjct: 566 DHQQLGPVILHNGAAKAGLRQSLFERLIKLGHIPIRLEVQYRMHPSLSEFPSNMFYDGSL 625
Query: 576 EDG-SDVEDYTTRDWHEYRCFG-PFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKL 633
++G S + R + G P F+ + +E +G+ S++N E + +L
Sbjct: 626 QNGVSHEQRLIRRSSFPWPAPGIPLLFWSSYGTEEISISGT-SFLNRSEAMNCEKIISRL 684
Query: 634 IS--MYPQLKSSSQLAIISPYRHQ---VKQFQERFKETFGVESQKVVDITTVDGCQGREK 688
+S + P Q+ +I+PY+ Q + Q+ E + V++ +VD QGREK
Sbjct: 685 LSEGIKPH-----QIGVITPYQGQRDYIVQYLLMNGAHPDREIYQDVEVASVDAFQGREK 739
Query: 689 DVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEK 748
D IFSC R++ +IGFL D RR+NV ITRAK + V+G TL++D WN L+
Sbjct: 740 DFIIFSCTRSNHTNTIGFLKDARRLNVAITRAKYGLFVLGNIKTLQKDPLWNRLLVHFRD 799
Query: 749 QDCLFRVSKPYASF-FSDENLESMRKNATTDN 779
+ L V SF +LES R +T +N
Sbjct: 800 KGAL--VEGRLDSFQLYTASLESARFKSTAEN 829
>gi|356577345|ref|XP_003556787.1| PREDICTED: uncharacterized protein LOC100781902 [Glycine max]
Length = 1636
Score = 179 bits (454), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 104/311 (33%), Positives = 166/311 (53%), Gaps = 8/311 (2%)
Query: 448 RKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHG-FDVVIIDEAAQAVEPATLVPLAT 506
+ + IR + ++ ST S GS L L ++++IDEAA + +++PL
Sbjct: 522 KSNNSEIREFCFQTSSLIFSTAS--GSHKLHSLTMKPLNILVIDEAAMLKDCESIIPLLL 579
Query: 507 -GCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSF 565
G L GD QL + V S V+ G+G SLF+RL G+P +L Q+RMHP++ SF
Sbjct: 580 PGISHALLFGDECQLSSMVRSNVSNEAGFGRSLFQRLSSLGFPKYLLNMQHRMHPQISSF 639
Query: 566 PSREFYDEALEDGSDVE--DYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEV 623
P+ FY ++D S+VE DY + + FGP+SF ++ EGKE S+ N+ EV
Sbjct: 640 PNSYFYFNKIQDASNVERIDYV-KQYLPGPMFGPYSFINVFEGKEQFDDAGRSYKNMAEV 698
Query: 624 DFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGC 683
V+ + L + K + I+SPY QV QE+ + + VD+ ++DG
Sbjct: 699 AVVMTILKNLFKAWLNSKHKLSIGIVSPYVGQVVAIQEKLGQIYESHDGFNVDVKSIDGF 758
Query: 684 QGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKH-WNNL 742
QG EKDV I S VR +++ S+ F++ +R NV +TRA+ + ++G L +++ W +
Sbjct: 759 QGGEKDVIILSTVRTNNRTSLEFISSPQRTNVALTRARHCLWILGNERALASNENVWKAI 818
Query: 743 VKSAEKQDCLF 753
V A+ + C F
Sbjct: 819 VLDAKNRKCFF 829
>gi|414886670|tpg|DAA62684.1| TPA: hypothetical protein ZEAMMB73_454199 [Zea mays]
Length = 925
Score = 179 bits (454), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 113/312 (36%), Positives = 162/312 (51%), Gaps = 11/312 (3%)
Query: 450 DRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLAT-GC 508
D +I +L A IV T S S + +V+++DEAAQ E +L+PL G
Sbjct: 576 DSRTIEEFLLQNAKIVLCTASSSYRLHYMQKAQPLEVLVVDEAAQLKECESLIPLQLPGV 635
Query: 509 KQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSR 568
+ L+GD QLPA V S V E G+G SLF+RL P +L QYRMHP + FP
Sbjct: 636 RHAVLIGDEYQLPALVKSKVCEDAGFGRSLFERLTSLEQPKHLLDVQYRMHPWISKFPVS 695
Query: 569 EFYDEALEDGSDVEDYTTRDWHEYRCFGP----FSFFDIHEGKESQPAGSGSWINIDEVD 624
FY + DG +V R++ GP +SF +I G E+ S IN E
Sbjct: 696 SFYGGRITDGPNV---LNRNYERRHLAGPMYGSYSFINIDGGSEATGKQDRSLINPVEAA 752
Query: 625 FVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERF-KETFGVESQKV-VDITTVDG 682
V + KL + + ++ ++SPY+ QV+ +E+ K+ + + + V + TVDG
Sbjct: 753 AVARIVQKLFIESVDTRKAIRVGVVSPYKGQVRAIEEKLGKQVYSMHNGSFSVKVRTVDG 812
Query: 683 CQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKH-WNN 741
QG E+DV IFS VR++ IGFLAD R NV +TRAK + ++G A TL K W
Sbjct: 813 FQGAEEDVIIFSTVRSNTAGKIGFLADTNRTNVALTRAKHCLWILGNAKTLASGKTIWRQ 872
Query: 742 LVKSAEKQDCLF 753
+V A+++ C F
Sbjct: 873 IVDDAKERGCFF 884
>gi|387595778|gb|EIJ93401.1| hypothetical protein NEPG_01743 [Nematocida parisii ERTm1]
Length = 1360
Score = 179 bits (454), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 139/416 (33%), Positives = 212/416 (50%), Gaps = 81/416 (19%)
Query: 375 RVLVCAPSNSALDEIV--------------LRLLNTG------IRD---------ENIRS 405
RVLVCAPSN+A+D ++ +R+ + G RD E+I S
Sbjct: 970 RVLVCAPSNAAVDMLIESGSIWKRIPDCRWIRIGSAGGSRTAVERDGMPLPKEEKEDILS 1029
Query: 406 YTPKIVRIGLKAHHSVNSVAIDHLVEQKRDDS------AADKQKHGATRKDRDSIRSAIL 459
+P +V+ SV + H ++ K D S A D++ R +S L
Sbjct: 1030 -SPSLVQ-----DISVQNTPTQHAIDPK-DISIFGSIGAYDRRCENLGDYTRQDSKSE-L 1081
Query: 460 NEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQ 519
+ A +V TLS +GS+ L + + FD++IIDEA QA EP+TL+PL ++ LVGDP+Q
Sbjct: 1082 SRANLVFCTLSMAGSSSLRE--YFFDILIIDEACQATEPSTLIPLRALPSKLILVGDPMQ 1139
Query: 520 LPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGS 579
LP T+IS E +LF+RL + P +L TQYRM+ + F S++FY++ L++G
Sbjct: 1140 LPPTIISQEKE---LTLTLFERLS-SSIPPLLLDTQYRMNSMISKFASQQFYNDKLKNGV 1195
Query: 580 DVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQ 639
V PF+F D EG E N E+ +L + + Y
Sbjct: 1196 IVNS-----------LLPFAFID-AEGVEK--TDDKDIYNKKEITTILQFYGAAVKAY-- 1239
Query: 640 LKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRAS 699
+ IISPY+ QV + ++ ++ +DI TVDG QG+EKD I S VR+
Sbjct: 1240 ----GTVGIISPYKGQVSRLKKYIRD---------IDIATVDGFQGQEKDCIIISTVRS- 1285
Query: 700 DKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRV 755
K IGFL+D RRMNV +TRA+ ++++VG L++D W L+K + + +++V
Sbjct: 1286 --KRIGFLSDIRRMNVALTRARYTLIIVGSMRLLQQDPTWQPLIKYVNENNFVYKV 1339
Score = 48.1 bits (113), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 110/257 (42%), Gaps = 22/257 (8%)
Query: 52 REVKDTYKDVDDYLATFEPLLFEEVKAQIIQKKDEEEVQEWKLR-LVMECGEADGFHLPS 110
+ VK TY DY +T+ PL+ +E A I E V + + +VM G+ D +
Sbjct: 720 QSVKSTYSTFLDYFSTYSPLIIKEALASIESSITVESVSKKPIDGIVM--GKHDDTRTTT 777
Query: 111 VTYEADEVESISPNDLLLLSKEEFKEGSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHI 170
+ +S+ ND++ + +T Y+ +V + + + + +
Sbjct: 778 LAILTRHKQSLLINDIVRV----VNLNNTDENNYSTGIVMYEKEGQYEIMVCMKSLEKQG 833
Query: 171 NKDAVKSQRLLNIHSLITSSVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILS 230
V Q L NI S + + + + +++ S+ + Y SV +P + +
Sbjct: 834 RCHKVSIQLLANITSTMREYDALIRLQKLAIR-SSILDPCKFYKKDGSVTGMP--KGVHA 890
Query: 231 ASEKSSGSQDQSWKIPGLLHEYIKE---------NHNASQLEAIHEGLLRK-AFVLIQGP 280
+EKS D +PG I E N SQ A++ LL K + LIQGP
Sbjct: 891 YNEKSH--PDSILNMPGFKTSEINECPLISAFYSQLNKSQQAAVYNALLPKNSISLIQGP 948
Query: 281 PGTGKTQTILGLLSAIL 297
PGTGKT+TI G+++ L
Sbjct: 949 PGTGKTKTISGMIACFL 965
>gi|448086434|ref|XP_004196100.1| Piso0_005544 [Millerozyma farinosa CBS 7064]
gi|359377522|emb|CCE85905.1| Piso0_005544 [Millerozyma farinosa CBS 7064]
Length = 958
Score = 179 bits (454), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 135/432 (31%), Positives = 215/432 (49%), Gaps = 60/432 (13%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + S+ ++ R+LVCAPSN A+D + +L G+ K+VR
Sbjct: 431 PGTGKTVTSATIVYHLSKLHKKRILVCAPSNVAVDHLANKLNLLGL----------KVVR 480
Query: 413 IGLKAHHSVNSVAIDHL-VEQKRDDSAADKQK-------------HGATRKDRDSIRSA- 457
+ K+ V S ++ HL + K DSA + K T++ R+A
Sbjct: 481 LTAKSREDVES-SVKHLALHNKVYDSAKGELKKLYNMRNSLGELSEDDTKRLIQLSRTAE 539
Query: 458 --ILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVG 515
+L+ +VC T +G L++ F V+IDE+ QA EP L+P+ G KQV LVG
Sbjct: 540 MRLLSSCDVVCCTCVGAGDRRLTRFK--FRTVLIDESTQASEPEVLIPIVKGAKQVILVG 597
Query: 516 DPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEAL 575
D QL ++ A G SLF+RL G+ L+ QYRM+P + FPS FY+ +L
Sbjct: 598 DHQQLGPVILEKRAGDAGLKQSLFERLVVLGHVPIRLEVQYRMNPCLSEFPSNMFYEGSL 657
Query: 576 EDGSDVEDYTTRDW-HEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLI 634
++G ++ ++ + F + G+E S++N E V K+I
Sbjct: 658 QNGVTTKERLIKNASFPWPVIDHPMMFWANYGREEISGSGHSFLNRVEAMNV----EKII 713
Query: 635 S-MYPQLKSSSQLAIISPYRHQ-------------VKQFQERFKETFGVESQKVVDITTV 680
+ ++ Q+ +I+PY Q + + ++R+ E V+IT+V
Sbjct: 714 TRLFKDGIGPEQIGVITPYEGQRAYLIQYMSINSTLTEMKDRYLE---------VEITSV 764
Query: 681 DGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWN 740
D QGREKD I SCVRA+D+++IGFL+D RR+NV +TRAK ++++G L + WN
Sbjct: 765 DAFQGREKDFIILSCVRANDQQTIGFLSDSRRLNVALTRAKYGLVILGNPRALCRNTLWN 824
Query: 741 NLVKSAEKQDCL 752
+L+ ++ CL
Sbjct: 825 HLLVHFREKGCL 836
>gi|255713384|ref|XP_002552974.1| KLTH0D05786p [Lachancea thermotolerans]
gi|238934354|emb|CAR22536.1| KLTH0D05786p [Lachancea thermotolerans CBS 6340]
Length = 982
Score = 179 bits (454), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 133/428 (31%), Positives = 220/428 (51%), Gaps = 55/428 (12%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + S+ ++ R+LVCAPSN A+D + +L + G+ K+VR
Sbjct: 438 PGTGKTVTSATIVYHLSKLHKERILVCAPSNVAVDHLAAKLRDLGL----------KVVR 487
Query: 413 IGLKAHH----SVNSVAIDHLV---------------EQKRDDSAADKQKHGATRKDRDS 453
+ K+ SV+++ + +LV E + S +D +K ++ R S
Sbjct: 488 LTAKSREDVESSVSNLGLHNLVSRSAKGELKKLLKLKEDVGELSPSDAKKF--VKQVRKS 545
Query: 454 IRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFL 513
IL +A +VC T +G +L F V+IDE+ QA EP L+P+ G KQV L
Sbjct: 546 -ELEILKKADVVCCTCVGAGD---KRLEAKFRTVLIDESTQASEPECLIPIVKGAKQVVL 601
Query: 514 VGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDE 573
VGD QL ++ A G SLF+RL G+ L+ QYRM+P + FPS FY+
Sbjct: 602 VGDHQQLGPVILDRKAADAGLKQSLFERLISLGHIPIRLEVQYRMNPHLSEFPSNMFYEG 661
Query: 574 ALEDGSDVEDY----TTRDW--HEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVL 627
+L++G +E +T W H+ P F+ + G+E S++N E
Sbjct: 662 SLQNGVTIEQRSVTNSTFPWPIHDL----PMMFWSNY-GREEISGNGTSYLNRIEAMNCE 716
Query: 628 LLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKV---VDITTVDGCQ 684
+ KL + Q+ +I+PY Q + + ++ + G +++ V++ +VD Q
Sbjct: 717 RVITKL---FKDGVKPDQIGVITPYEGQ-RAYIVQYMQMNGSMDKELYMNVEVASVDAFQ 772
Query: 685 GREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVK 744
GREKD I SCVRA+++++IGFL+D RR+NV +TR+K ++++G +L + W++L+
Sbjct: 773 GREKDYIILSCVRANEQQAIGFLSDPRRLNVALTRSKYGLVILGNPRSLSRNSLWSHLLV 832
Query: 745 SAEKQDCL 752
++ CL
Sbjct: 833 YFREKGCL 840
>gi|307102593|gb|EFN50864.1| hypothetical protein CHLNCDRAFT_59413 [Chlorella variabilis]
Length = 762
Score = 179 bits (454), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 132/410 (32%), Positives = 205/410 (50%), Gaps = 49/410 (11%)
Query: 376 VLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQKRD 435
+L A +N+A D ++ LL GIR +R P VR L+ H+ ++ LV+
Sbjct: 374 ILAVADTNAAADNLLDGLLARGIR--AVRVGQPAKVRPELR--HAC----LEALVQSTPS 425
Query: 436 DSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQA 495
A + + GA L + +V +T + +G A L F +V++DE AQA
Sbjct: 426 GQRAARLRAGA---------DVFLQQ--VVVATCNGAGDARLEA--QCFRIVVLDECAQA 472
Query: 496 VEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGY-GTSLFKRLQRAGYPVKMLKT 554
EP++LVPL G + V + GD QLP TV+S A+ + + LF RL G ++L+
Sbjct: 473 TEPSSLVPLVKGAQCVVMAGDQRQLPPTVVSERAKEMYHLDVPLFTRLLEGGVSSRLLEV 532
Query: 555 QYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR---DWHEYRCFGPFSFFDIHEGKESQP 611
QYRMHP + FPSR FY ++ G +D W C P F +I EG E Q
Sbjct: 533 QYRMHPAISEFPSRHFYSGRVQSGVTQQDRPPVRGVPWTNPAC--PVLFINIAEGSEQQA 590
Query: 612 -AGSG-----------SWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVK-- 657
AG+ S+ N +E + + +++ ++S + ++SPY QV+
Sbjct: 591 LAGNNRRGGSGDSSGASYSNSEEAEVAMKALQRVLQEDDSVQS---IVLLSPYNGQVRLL 647
Query: 658 -QFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVG 716
R + G + + ++TVDG QGRE DV IFS VR++ +GFL+D RR+NV
Sbjct: 648 TSLLSRAELPEGAADRCQITVSTVDGYQGRESDVVIFSTVRSNPAGRVGFLSDERRLNVA 707
Query: 717 ITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRVSKPYASFFSDE 766
ITRA+ ++V+G +TL+ D +W ++ +Q L +P AS + E
Sbjct: 708 ITRARRGLIVLGNQATLQHDPNWGAWMQWVAEQRRL----RPAASTIAPE 753
Score = 43.9 bits (102), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
Query: 258 NASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPA---RVHSKGGL 310
N SQ+ A+ L R F L QGPPGTGKT+T+L + ++ A R H++G +
Sbjct: 320 NESQVRAVAASLTRT-FTLWQGPPGTGKTRTLLAFVEVMVRAVEGSVVRRHAQGAI 374
>gi|21410895|gb|AAH30916.1| Upf1 protein, partial [Mus musculus]
Length = 543
Score = 179 bits (454), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 114/334 (34%), Positives = 182/334 (54%), Gaps = 19/334 (5%)
Query: 426 IDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFD 485
+ L ++ + S+AD++++ A + R + R ++N VI C+ + +G L+K+ F
Sbjct: 2 LQQLKDETGELSSADEKRYRALK--RTAERELLMNADVICCTCVG-AGDPRLAKMQ--FR 56
Query: 486 VVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRA 545
++IDE+ QA EP +VP+ G KQ+ LVGD QL V+ A G SLF+RL
Sbjct: 57 SILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 116
Query: 546 GYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR--DWHEYRCFGPFSFFDI 603
G L+ QYRMHP + +FPS FY+ +L++G D + D+ + P FF +
Sbjct: 117 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPM-FFYV 175
Query: 604 HEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSS---QLAIISPYRHQVKQFQ 660
+G+E + S++N E V + KL LK+ + Q+ II+PY Q
Sbjct: 176 TQGQEEIASSGTSYLNRTEAANVEKITTKL------LKAGAKPDQIGIITPYEGQRSYLV 229
Query: 661 E--RFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGIT 718
+ +F + + + V+I +VD QGREKD I SCVRA++ + IGFL D RR+NV +T
Sbjct: 230 QYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALT 289
Query: 719 RAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
RA+ +++VG L + WN+L+ ++Q L
Sbjct: 290 RARYGVIIVGNPKALSKQPLWNHLLSYYKEQKAL 323
>gi|289192489|ref|YP_003458430.1| DNA helicase [Methanocaldococcus sp. FS406-22]
gi|288938939|gb|ADC69694.1| DNA helicase [Methanocaldococcus sp. FS406-22]
Length = 647
Score = 179 bits (453), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 166/569 (29%), Positives = 267/569 (46%), Gaps = 96/569 (16%)
Query: 219 VGSLPFKDLILSASEKSSGSQDQSWKIPGLLH-----------EYIKENHNASQLEAIHE 267
V + FK + + E + ++ I G+ H E+ +N N SQ A+ +
Sbjct: 126 VNDITFKRMKEALREFARKRDKLAYIILGIEHPEKPLRENIKLEFYDKNLNESQKIAVKK 185
Query: 268 GLLRKAFVLIQGPPGTGKTQTILGLL--------SAILHATPARVHSKGGLRE-IKRGPE 318
+L K LI GPPGTGKT+TI ++ +L + + + L IK+ P+
Sbjct: 186 AVLSKDLYLIHGPPGTGKTRTITEVIVQEVRFNKHKVLATADSNIAADNILEYLIKKYPD 245
Query: 319 LPMHEKYNHWGRASPWLVGANPRDNIMP--IDGDDGFFPTTGNELKPEVVNSSRRYRVRV 376
L + + H R S L+ + +P I+ + + E + + R +
Sbjct: 246 LKVV-RVGHPTRISKDLIQHS-----LPYLIENHEKYQEILSLR---EKIKEIKEQRDKF 296
Query: 377 LVCAPS--NSALDEIVLRLLNT-----GIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHL 429
L +P DE +L++ GI E I S I+R K +N+ +D +
Sbjct: 297 LKPSPRWRRGMSDEQILKVAKRKKSYRGIPKEKIISMAEWIIR-NRKIKRIINN--LDEI 353
Query: 430 VEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVII 489
E+ I + IL+EA ++ ST S +GS +L FDVV+I
Sbjct: 354 TEK---------------------IMNEILSEADVIVSTNSMAGSEILK--GWEFDVVVI 390
Query: 490 DEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYP- 548
DE +QA+EP+ L+P+ G K++ + GD QLP TV+S E+ +LF+RL + YP
Sbjct: 391 DEGSQAMEPSCLIPIVKG-KKLIMAGDHKQLPPTVLS---ENEELKKTLFERLIKK-YPE 445
Query: 549 -VKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFG----------P 597
+L+ QYRM+ ++ FP++ FYD L+ V++ T D + P
Sbjct: 446 FSSILEIQYRMNEKIMEFPNKMFYDNKLKADESVKNITLLDLVKEEEIDEADRDIINEIP 505
Query: 598 FSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVK 657
F + EG E + S S+ NI+E + VL + KL+ K +I+PY QV+
Sbjct: 506 VQFIHV-EGVERKDKESPSYYNIEEAEKVLEVVKKLV------KYKIPTNVITPYDAQVR 558
Query: 658 QFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGI 717
+ F+E +++ TVDG QGRE + + S VR K+ GFL D RR+NV I
Sbjct: 559 YLRRMFEE-----HNIDIEVNTVDGFQGRENEAIVISFVRT---KNFGFLRDLRRLNVAI 610
Query: 718 TRAKSSILVVGCASTLREDKHWNNLVKSA 746
TRAK ++++G L++DK +N ++K A
Sbjct: 611 TRAKRKLILIGNEHLLKQDKVYNEMIKWA 639
>gi|405123238|gb|AFR98003.1| ATP dependent helicase [Cryptococcus neoformans var. grubii H99]
Length = 1092
Score = 179 bits (453), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 128/405 (31%), Positives = 207/405 (51%), Gaps = 49/405 (12%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLV---E 431
+VLVCAPSN A+D + ++ TG+ K+VR+ K+ +++S ++D L +
Sbjct: 498 QVLVCAPSNVAVDHLCEKIHQTGL----------KVVRLAAKSREALDS-SVDFLSLHSQ 546
Query: 432 QKRDDSAADKQKHGATRKDRDSIRSA---------------ILNEAVIVCSTLSFSGSAL 476
D+ + QK R D+ + + ILN A ++C+T +G
Sbjct: 547 VANADTHHELQKLIQLRNDQGELSQSDERKYKTLVKACEKDILNAADVICTTCVGAGDPR 606
Query: 477 LSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGT 536
L+K F V+IDEA Q+ EP ++PL GCKQ LVGD QL +++ A G
Sbjct: 607 LAKFK--FRTVLIDEATQSAEPECMIPLVMGCKQAVLVGDHQQLGPVIMNKKAARAGLSQ 664
Query: 537 SLFKRLQRAG-YPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR--DWHEYR 593
SLF+RL G +P++ L+ QYRMHP + F S FY+ L++G + + D+
Sbjct: 665 SLFERLVILGNHPIR-LQVQYRMHPCLSEFSSNLFYEGTLQNGVTAPERLRKNVDFPWPV 723
Query: 594 CFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSS---SQLAIIS 650
P FF + G E + S++N E V K+++ + KS +Q+ +I+
Sbjct: 724 ADTPM-FFHQNLGTEEISSSGTSFLNRTEASNV----EKMVTKF--FKSGVLPNQIGVIT 776
Query: 651 PYRHQVKQFQERFKETFGVESQ---KVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFL 707
PY Q + + + + G + K V++ +VD QGREKD I SCVR+++ + IGFL
Sbjct: 777 PYEGQ-RSYIASYMQLHGSLKKDLYKEVEVASVDAFQGREKDYIILSCVRSNEHQGIGFL 835
Query: 708 ADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
D RR+NV +TRAK ++++G L + W L+ +++ C
Sbjct: 836 NDPRRLNVALTRAKYGVVILGNPKVLSKHPLWLYLLSHYKEKGCF 880
>gi|387594020|gb|EIJ89044.1| hypothetical protein NEQG_00863 [Nematocida parisii ERTm3]
Length = 1229
Score = 179 bits (453), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 139/416 (33%), Positives = 212/416 (50%), Gaps = 81/416 (19%)
Query: 375 RVLVCAPSNSALDEIV--------------LRLLNTG------IRD---------ENIRS 405
RVLVCAPSN+A+D ++ +R+ + G RD E+I S
Sbjct: 839 RVLVCAPSNAAVDMLIESGSIWKRIPDCRWIRIGSAGGSRTAVERDGMPLPKEEKEDILS 898
Query: 406 YTPKIVRIGLKAHHSVNSVAIDHLVEQKRDDS------AADKQKHGATRKDRDSIRSAIL 459
+P +V+ SV + H ++ K D S A D++ R +S L
Sbjct: 899 -SPSLVQ-----DISVQNTPTQHAIDPK-DISIFGSIGAYDRRCENLGDYTRQDSKSE-L 950
Query: 460 NEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQ 519
+ A +V TLS +GS+ L + + FD++IIDEA QA EP+TL+PL ++ LVGDP+Q
Sbjct: 951 SRANLVFCTLSMAGSSSLRE--YFFDILIIDEACQATEPSTLIPLRALPSKLILVGDPMQ 1008
Query: 520 LPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGS 579
LP T+IS E +LF+RL + P +L TQYRM+ + F S++FY++ L++G
Sbjct: 1009 LPPTIISQEKE---LTLTLFERLS-SSIPPLLLDTQYRMNSMISKFASQQFYNDKLKNGV 1064
Query: 580 DVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQ 639
V PF+F D EG E N E+ +L + + Y
Sbjct: 1065 IVNS-----------LLPFAFID-AEGVEK--TDDKDIYNKKEITTILQFYGAAVKAY-- 1108
Query: 640 LKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRAS 699
+ IISPY+ QV + ++ ++ +DI TVDG QG+EKD I S VR+
Sbjct: 1109 ----GTVGIISPYKGQVSRLKKYIRD---------IDIATVDGFQGQEKDCIIISTVRS- 1154
Query: 700 DKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRV 755
K IGFL+D RRMNV +TRA+ ++++VG L++D W L+K + + +++V
Sbjct: 1155 --KRIGFLSDIRRMNVALTRARYTLIIVGSMRLLQQDPTWQPLIKYVNENNFVYKV 1208
Score = 48.1 bits (113), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 110/257 (42%), Gaps = 22/257 (8%)
Query: 52 REVKDTYKDVDDYLATFEPLLFEEVKAQIIQKKDEEEVQEWKLR-LVMECGEADGFHLPS 110
+ VK TY DY +T+ PL+ +E A I E V + + +VM G+ D +
Sbjct: 589 QSVKSTYSTFLDYFSTYSPLIIKEALASIESSITVESVSKKPIDGIVM--GKHDDTRTTT 646
Query: 111 VTYEADEVESISPNDLLLLSKEEFKEGSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHI 170
+ +S+ ND++ + +T Y+ +V + + + + +
Sbjct: 647 LAILTRHKQSLLINDIVRV----VNLNNTDENNYSTGIVMYEKEGQYEIMVCMKSLEKQG 702
Query: 171 NKDAVKSQRLLNIHSLITSSVSAVEKRLFSLKICSLSTIAREYLALRSVGSLPFKDLILS 230
V Q L NI S + + + + +++ S+ + Y SV +P + +
Sbjct: 703 RCHKVSIQLLANITSTMREYDALIRLQKLAIR-SSILDPCKFYKKDGSVTGMP--KGVHA 759
Query: 231 ASEKSSGSQDQSWKIPGLLHEYIKE---------NHNASQLEAIHEGLLRK-AFVLIQGP 280
+EKS D +PG I E N SQ A++ LL K + LIQGP
Sbjct: 760 YNEKSH--PDSILNMPGFKTSEINECPLISAFYSQLNKSQQAAVYNALLPKNSISLIQGP 817
Query: 281 PGTGKTQTILGLLSAIL 297
PGTGKT+TI G+++ L
Sbjct: 818 PGTGKTKTISGMIACFL 834
>gi|401400080|ref|XP_003880707.1| putative ATP-dependent helicase [Neospora caninum Liverpool]
gi|325115118|emb|CBZ50674.1| putative ATP-dependent helicase [Neospora caninum Liverpool]
Length = 1394
Score = 179 bits (453), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 127/384 (33%), Positives = 192/384 (50%), Gaps = 36/384 (9%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQKR 434
++L A SN A D ++ L GIR VR+G + + AI L + R
Sbjct: 912 KILAVADSNVAADNLMEGLSARGIRS----------VRVGNGSESDLQEEAIADL-GRYR 960
Query: 435 DDSAADKQKHGATRKDRDSIRSAILNEAV----IVCSTLSFSGSALLSKLNHGFDVVIID 490
D + K + ++R A+ EA+ ++ +T SG + L F VIID
Sbjct: 961 DYV---RLKQNGMYGEAKTVRMALFREAIRRQPVIIATCVGSGHEMFDDLV--FPRVIID 1015
Query: 491 EAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGY-PV 549
E AQA+EP+ L+PLA GC+ L+GD QLP T++SP A G SL +R +G P+
Sbjct: 1016 EGAQAIEPSNLIPLARGCRNFVLIGDHKQLPPTILSPEAASRGLDVSLLERFVGSGIAPI 1075
Query: 550 KMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYR--------CFGPFSFF 601
++L Q RMHP + FP+ +FYD ++ DV+D +R C S
Sbjct: 1076 QLLDEQRRMHPSIAYFPNLQFYDGKIQS-RDVDDRNRPPVAGFRWPSQNSRVCLVDISAA 1134
Query: 602 DIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQE 661
+ + SQ S ID + +L S+ P SQ+ +++PY Q + ++
Sbjct: 1135 GLSGSEASQGTSKYSAAEIDPIIAILQSVANEGSVLP-----SQIGVLTPYDAQKARLRK 1189
Query: 662 RFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAK 721
ETF + +++ +VDG QG+EKD+ IFS VR++ + IGFL D RRMNV +TRAK
Sbjct: 1190 AINETFEPPACYQIEVDSVDGFQGKEKDLIIFSAVRSNARGEIGFLRDPRRMNVMLTRAK 1249
Query: 722 SSILVVGCASTLRED-KHWNNLVK 744
++VVG TL D +W ++
Sbjct: 1250 RGVIVVGDQLTLWNDATNWRPWIQ 1273
>gi|334183665|ref|NP_001185324.1| DNA helicase domain-containing protein [Arabidopsis thaliana]
gi|332196305|gb|AEE34426.1| DNA helicase domain-containing protein [Arabidopsis thaliana]
Length = 1016
Score = 179 bits (453), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 107/297 (36%), Positives = 164/297 (55%), Gaps = 10/297 (3%)
Query: 460 NEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLAT-GCKQVFLVGDPV 518
N ++ C+ S SA L ++ +++IDEAAQ E + +PL G + L+GD
Sbjct: 533 NAYLLFCTA---SSSARL-HMSSPIQLLVIDEAAQLKECESAIPLQLRGLQHAILIGDEK 588
Query: 519 QLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDG 578
QLPA + S +A G SLF+RL G+ ++L QYRMHP + FP+REFYD + D
Sbjct: 589 QLPAMIKSNIASEADLGRSLFERLVLLGHNKQLLNMQYRMHPSISIFPNREFYDMKILDA 648
Query: 579 SDVE--DYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISM 636
V Y + E + +GP+SF +I G+E G S N+ EV V + KL S+
Sbjct: 649 PSVRLRSYEKKFLPE-KMYGPYSFINIAYGREQFGEGYSS-KNLVEVSVVAEIVSKLYSV 706
Query: 637 YPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCV 696
+ + + +ISPY+ QV QER E + E V + +VDG QG E+D+ I S V
Sbjct: 707 SRKTGRTISVGVISPYKAQVFAIQERIGEKYNTEGTFTVSVRSVDGFQGGEEDIIIISTV 766
Query: 697 RASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKH-WNNLVKSAEKQDCL 752
R++ +IGFL++ +R NV +TRA+ + ++G +TL ++ W LV A+ ++C
Sbjct: 767 RSNGNGAIGFLSNQQRTNVALTRARYCLWILGNEATLTNNRSVWRQLVDDAKARNCF 823
>gi|440904008|gb|ELR54581.1| Regulator of nonsense transcripts 1 [Bos grunniens mutus]
Length = 1156
Score = 179 bits (453), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 128/393 (32%), Positives = 206/393 (52%), Gaps = 45/393 (11%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + +R+ VLVCAPSN A+D++ ++ TG+ K+VR
Sbjct: 529 PGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGL----------KVVR 578
Query: 413 IGLKAHHSVNSVA-----------IDHL-----VEQKRDD----SAADKQKHGATRKDRD 452
+ K+ +++S +D + ++Q +D+ S+AD++++ A + R
Sbjct: 579 LCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSADEKRYRALK--RT 636
Query: 453 SIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVF 512
+ R ++N VI C+ + +G L+K+ F ++IDE+ QA EP +VP+ G KQ+
Sbjct: 637 AERELLMNADVICCTCVG-AGDPRLAKMQ--FRSILIDESTQATEPECMVPVVLGAKQLI 693
Query: 513 LVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYD 572
LVGD QL V+ A G SLF+RL G L+ QYRMHP + +FPS FY+
Sbjct: 694 LVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYE 753
Query: 573 EALEDGSDVEDYTTR--DWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
+L++G D + D+ + P FF + +G+E + S++N E V +
Sbjct: 754 GSLQNGVTAADRVKKGFDFQWPQPDKPM-FFYVTQGQEEIASSGTSYLNRTEAANVEKIT 812
Query: 631 HKLISMYPQLKSSSQLAIISPYRHQVKQFQE--RFKETFGVESQKVVDITTVDGCQGREK 688
KL+ + Q+ II+PY Q + +F + + + V+I +VD QGREK
Sbjct: 813 TKLLKAGAK---PDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREK 869
Query: 689 DVAIFSCVRASDKKSIGFLADYRRMNVGITRAK 721
D I SCVRA++ + IGFL D RR+NV +TRA+
Sbjct: 870 DFIILSCVRANEHQGIGFLNDPRRLNVALTRAR 902
>gi|15218807|ref|NP_176757.1| DNA helicase domain-containing protein [Arabidopsis thaliana]
gi|332196304|gb|AEE34425.1| DNA helicase domain-containing protein [Arabidopsis thaliana]
Length = 1050
Score = 178 bits (452), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 107/297 (36%), Positives = 164/297 (55%), Gaps = 10/297 (3%)
Query: 460 NEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLAT-GCKQVFLVGDPV 518
N ++ C+ S SA L ++ +++IDEAAQ E + +PL G + L+GD
Sbjct: 533 NAYLLFCTA---SSSARL-HMSSPIQLLVIDEAAQLKECESAIPLQLRGLQHAILIGDEK 588
Query: 519 QLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDG 578
QLPA + S +A G SLF+RL G+ ++L QYRMHP + FP+REFYD + D
Sbjct: 589 QLPAMIKSNIASEADLGRSLFERLVLLGHNKQLLNMQYRMHPSISIFPNREFYDMKILDA 648
Query: 579 SDVE--DYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISM 636
V Y + E + +GP+SF +I G+E G S N+ EV V + KL S+
Sbjct: 649 PSVRLRSYEKKFLPE-KMYGPYSFINIAYGREQFGEGYSS-KNLVEVSVVAEIVSKLYSV 706
Query: 637 YPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCV 696
+ + + +ISPY+ QV QER E + E V + +VDG QG E+D+ I S V
Sbjct: 707 SRKTGRTISVGVISPYKAQVFAIQERIGEKYNTEGTFTVSVRSVDGFQGGEEDIIIISTV 766
Query: 697 RASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKH-WNNLVKSAEKQDCL 752
R++ +IGFL++ +R NV +TRA+ + ++G +TL ++ W LV A+ ++C
Sbjct: 767 RSNGNGAIGFLSNQQRTNVALTRARYCLWILGNEATLTNNRSVWRQLVDDAKARNCF 823
>gi|448081930|ref|XP_004195009.1| Piso0_005544 [Millerozyma farinosa CBS 7064]
gi|359376431|emb|CCE87013.1| Piso0_005544 [Millerozyma farinosa CBS 7064]
Length = 959
Score = 178 bits (452), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 135/432 (31%), Positives = 215/432 (49%), Gaps = 60/432 (13%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVR 412
P TG + V + S+ ++ R+LVCAPSN A+D + +L G+ K+VR
Sbjct: 431 PGTGKTVTSATIVYHLSKLHKKRILVCAPSNVAVDHLANKLNLLGL----------KVVR 480
Query: 413 IGLKAHHSVNSVAIDHL-VEQKRDDSAADKQK-------------HGATRKDRDSIRSA- 457
+ K+ V S ++ HL + K DSA + K T++ R+A
Sbjct: 481 LTAKSREDVES-SVKHLALHNKVYDSARGELKKLYNMRNSLGELSEEDTKRLIQLSRTAE 539
Query: 458 --ILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVG 515
+L+ +VC T +G L++ F V+IDE+ QA EP L+P+ G KQV LVG
Sbjct: 540 MRLLSSCDVVCCTCVGAGDRRLARFK--FRTVLIDESTQASEPEVLIPIVKGAKQVILVG 597
Query: 516 DPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEAL 575
D QL ++ A G SLF+RL G+ L+ QYRM+P + FPS FY+ +L
Sbjct: 598 DHQQLGPVILEKRAGDAGLKQSLFERLVVLGHVPIRLEVQYRMNPCLSEFPSNMFYEGSL 657
Query: 576 EDGSDVEDYTTRDW-HEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLI 634
++G ++ ++ + F + G+E S++N E V K+I
Sbjct: 658 QNGVTTKERLIKNASFPWPVIDHPMMFWANYGREEISGSGHSFLNRVEAMNV----EKII 713
Query: 635 S-MYPQLKSSSQLAIISPYRHQ-------------VKQFQERFKETFGVESQKVVDITTV 680
+ ++ Q+ +I+PY Q + + ++R+ E V+IT+V
Sbjct: 714 TRLFKDGIGPEQIGVITPYEGQRAYLIQYMSINSTLTEMKDRYLE---------VEITSV 764
Query: 681 DGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWN 740
D QGREKD I SCVRA+D+++IGFL+D RR+NV +TRAK ++++G L + WN
Sbjct: 765 DAFQGREKDFIILSCVRANDQQTIGFLSDSRRLNVALTRAKYGLVILGNPRALCRNTLWN 824
Query: 741 NLVKSAEKQDCL 752
+L+ ++ CL
Sbjct: 825 HLLVHFREKGCL 836
>gi|221484204|gb|EEE22500.1| regulator of nonsense transcripts 1 protein, putative [Toxoplasma
gondii GT1]
Length = 1449
Score = 178 bits (452), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 139/410 (33%), Positives = 203/410 (49%), Gaps = 51/410 (12%)
Query: 358 GNELKPEVVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKA 417
G+ + P + +VLV APSN A+D++ R+ TG++ IR Y+ R G A
Sbjct: 647 GSHIHPRCAGRVNKEGGQVLVVAPSNVAVDQLAERINRTGLK--VIRMYSKS--REG--A 700
Query: 418 HHSVNSVAIDHLV-----------------------EQKRDDSAADKQKHGATRKDRDSI 454
S+ S +++L EQ + +AAD+ R+ R I
Sbjct: 701 SSSLTSFCVENLALHKKVLELKTGSSDEMAKYIQLKEQTGELAAADE------RRLRLLI 754
Query: 455 RSA---ILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQV 511
A IL A ++C+T +G L F V+IDEAAQA EP L+P+ G KQV
Sbjct: 755 SRAEMEILQTADVICTTCVGAGDNRLQGFR--FRQVVIDEAAQATEPECLIPIVLGAKQV 812
Query: 512 FLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFY 571
L+GD QL V+S A G TSLF RL G+ LK QYRMHP + FPS FY
Sbjct: 813 VLIGDHCQLGPVVLSKKAAAAGLATSLFSRLLALGHRPLRLKVQYRMHPALSFFPSYFFY 872
Query: 572 DEALEDGSDVED--YTTRDWHEYRCFGPF---SFFDIHEGKESQPAGSG-SWINIDEVDF 625
+ L++G + + Y + ++R P F H + +GSG S++N E
Sbjct: 873 EGELQNGVTMTERTYFHQGPGDHRFPWPNEERPMFFYHSTASEEISGSGTSYVNRIEASN 932
Query: 626 VLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKE--TFGVESQKVVDITTVDGC 683
+ + L+ LK +SQ+ +I+PY Q F+ T G + +++ +VD
Sbjct: 933 IEKIVTFLLKC--GLK-ASQIGVITPYDGQRAHISSLFQRQTTLGQAAFADLEVASVDAF 989
Query: 684 QGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTL 733
QGREKD + SCVR++ IGFLAD RR+NV +TRAK +++ G A+ L
Sbjct: 990 QGREKDFILLSCVRSNSNTGIGFLADSRRLNVAMTRAKYGLIICGNATVL 1039
>gi|221505815|gb|EEE31460.1| regulator or nonsense transcripts RENT1, putative [Toxoplasma gondii
VEG]
Length = 1449
Score = 178 bits (452), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 139/410 (33%), Positives = 203/410 (49%), Gaps = 51/410 (12%)
Query: 358 GNELKPEVVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKA 417
G+ + P + +VLV APSN A+D++ R+ TG++ IR Y+ R G A
Sbjct: 647 GSHIHPRCAGRVNKEGGQVLVVAPSNVAVDQLAERINRTGLK--VIRMYSKS--REG--A 700
Query: 418 HHSVNSVAIDHLV-----------------------EQKRDDSAADKQKHGATRKDRDSI 454
S+ S +++L EQ + +AAD+ R+ R I
Sbjct: 701 SSSLTSFCVENLALHKKVLELKTGSSDEMAKYIQLKEQTGELAAADE------RRLRLLI 754
Query: 455 RSA---ILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQV 511
A IL A ++C+T +G L F V+IDEAAQA EP L+P+ G KQV
Sbjct: 755 SRAEMEILQTADVICTTCVGAGDNRLQGFR--FRQVVIDEAAQATEPECLIPIVLGAKQV 812
Query: 512 FLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFY 571
L+GD QL V+S A G TSLF RL G+ LK QYRMHP + FPS FY
Sbjct: 813 VLIGDHCQLGPVVLSKKAAAAGLATSLFSRLLALGHRPLRLKVQYRMHPALSFFPSYFFY 872
Query: 572 DEALEDGSDVED--YTTRDWHEYRCFGPF---SFFDIHEGKESQPAGSG-SWINIDEVDF 625
+ L++G + + Y + ++R P F H + +GSG S++N E
Sbjct: 873 EGELQNGVTMTERTYFHQGPGDHRFPWPNEERPMFFYHSTASEEISGSGTSYVNRIEASN 932
Query: 626 VLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKE--TFGVESQKVVDITTVDGC 683
+ + L+ LK +SQ+ +I+PY Q F+ T G + +++ +VD
Sbjct: 933 IEKIVTFLLKC--GLK-ASQIGVITPYDGQRAHISSLFQRQTTLGQAAFADLEVASVDAF 989
Query: 684 QGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTL 733
QGREKD + SCVR++ IGFLAD RR+NV +TRAK +++ G A+ L
Sbjct: 990 QGREKDFILLSCVRSNSNTGIGFLADSRRLNVAMTRAKYGLIICGNATVL 1039
>gi|237838453|ref|XP_002368524.1| regulator of nonsense transcripts UPF1, putative [Toxoplasma gondii
ME49]
gi|211966188|gb|EEB01384.1| regulator of nonsense transcripts UPF1, putative [Toxoplasma gondii
ME49]
Length = 1449
Score = 178 bits (452), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 139/410 (33%), Positives = 203/410 (49%), Gaps = 51/410 (12%)
Query: 358 GNELKPEVVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKA 417
G+ + P + +VLV APSN A+D++ R+ TG++ IR Y+ R G A
Sbjct: 647 GSHIHPRCAGRVNKEGGQVLVVAPSNVAVDQLAERINRTGLK--VIRMYSKS--REG--A 700
Query: 418 HHSVNSVAIDHLV-----------------------EQKRDDSAADKQKHGATRKDRDSI 454
S+ S +++L EQ + +AAD+ R+ R I
Sbjct: 701 SSSLTSFCVENLALHKKVLELKTGSSDEMAKYIQLKEQTGELAAADE------RRLRLLI 754
Query: 455 RSA---ILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQV 511
A IL A ++C+T +G L F V+IDEAAQA EP L+P+ G KQV
Sbjct: 755 SRAEMEILQTADVICTTCVGAGDNRLQGFR--FRQVVIDEAAQATEPECLIPIVLGAKQV 812
Query: 512 FLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFY 571
L+GD QL V+S A G TSLF RL G+ LK QYRMHP + FPS FY
Sbjct: 813 VLIGDHCQLGPVVLSKKAAAAGLATSLFSRLLALGHRPLRLKVQYRMHPALSFFPSYFFY 872
Query: 572 DEALEDGSDVED--YTTRDWHEYRCFGPF---SFFDIHEGKESQPAGSG-SWINIDEVDF 625
+ L++G + + Y + ++R P F H + +GSG S++N E
Sbjct: 873 EGELQNGVTMTERTYFHQGPGDHRFPWPNEERPMFFYHSTASEEISGSGTSYVNRVEASN 932
Query: 626 VLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKE--TFGVESQKVVDITTVDGC 683
+ + L+ LK +SQ+ +I+PY Q F+ T G + +++ +VD
Sbjct: 933 IEKIVTFLLKC--GLK-ASQIGVITPYDGQRAHISSLFQRQTTLGQAAFADLEVASVDAF 989
Query: 684 QGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTL 733
QGREKD + SCVR++ IGFLAD RR+NV +TRAK +++ G A+ L
Sbjct: 990 QGREKDFILLSCVRSNSNTGIGFLADSRRLNVAMTRAKYGLIICGNATVL 1039
>gi|170593003|ref|XP_001901254.1| Regulator of nonsense transcripts 1 homolog [Brugia malayi]
gi|158591321|gb|EDP29934.1| Regulator of nonsense transcripts 1 homolog, putative [Brugia
malayi]
Length = 1112
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 127/426 (29%), Positives = 207/426 (48%), Gaps = 70/426 (16%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVA--------- 425
+VLVCAPSN A+D++ ++ TG+ K+VR+ K+ +++S
Sbjct: 480 QVLVCAPSNIAVDQLAEKIHRTGL----------KVVRLCAKSRETLDSPVAFLALHNQL 529
Query: 426 -----------IDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGS 474
+ L E+ + + AD+++ A R ++ +L A ++C T +
Sbjct: 530 RALHGAAELHKLQQLKEEMGELADADERRFRALRIAKEC---QLLTAADVICCTCVSAAD 586
Query: 475 ALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGY 534
+ LS + V+IDE+ QA EP +V + G +Q+ LVGD QL ++ A G
Sbjct: 587 SRLSHMR--IKCVLIDESTQATEPEVMVAVVCGVRQLVLVGDHCQLGPVIMCKKAAKAGL 644
Query: 535 GTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHE--- 591
SLF+RL G L+ QYRMHP + SFPS FY+ +L++G + + E
Sbjct: 645 SQSLFERLVLLGNRPIRLQVQYRMHPALSSFPSNVFYEGSLQNGVTEGKHLSMKRKEVIN 704
Query: 592 --YRCF------------------GPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFH 631
+ CF P F+ + G+E + S++N E V L
Sbjct: 705 LSHMCFISGERQLIGIDWQWPVPDKPMMFWSCY-GQEELSSSGTSFLNRTEAANVEKLAT 763
Query: 632 KLI--SMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKV---VDITTVDGCQGR 686
+ + + P+ Q+ II+PY Q + + +F +T G K+ +++ VD QGR
Sbjct: 764 RFLKAGLKPE-----QIGIITPYEGQ-RSYIVQFMQTQGALHSKLYLEMEVANVDAFQGR 817
Query: 687 EKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSA 746
EKD+ I +CVR++D + IGFL D RR+NV +TRAK +++VG A L WN L+
Sbjct: 818 EKDIIIVTCVRSNDHQGIGFLNDSRRLNVALTRAKFGLIIVGNAKVLSRHPLWNYLLSMF 877
Query: 747 EKQDCL 752
+++ CL
Sbjct: 878 KEKGCL 883
>gi|15239483|ref|NP_198519.1| tRNA-splicing endonuclease positive effector-related protein
[Arabidopsis thaliana]
gi|332006756|gb|AED94139.1| tRNA-splicing endonuclease positive effector-related protein
[Arabidopsis thaliana]
Length = 638
Score = 177 bits (450), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 121/394 (30%), Positives = 207/394 (52%), Gaps = 35/394 (8%)
Query: 373 RVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIV-------RIGLKAHHSVNSVA 425
R + +VCAP+N+A+ E+ RLL + +Y + R+ +K + +V
Sbjct: 250 RCKTVVCAPTNTAIVEVTSRLLALSNKYSEHATYGLGNIFLAGNQKRMRIKDTDYLRNVF 309
Query: 426 IDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFD 485
+DH + + R + +T + S+ S I ++ +T + +G+ +
Sbjct: 310 LDHRISKLR-------KLFLSTCGWKQSLESII----DLLENTETKTGN---------IE 349
Query: 486 VVIIDEAAQAVEPATLVPLAT-GCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQR 544
V+++DEAAQ E ++ L G + L+GD QLPA V + E +G SLF+RL
Sbjct: 350 VLVVDEAAQLKECESVAALQLPGLRHAILIGDEFQLPAMVHNDQCEKAKFGRSLFERLVL 409
Query: 545 AGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVED--YTTRDWHEYRCFGPFSFFD 602
G+ +L QYRMHP + FP +EFY ++D ++V++ Y R + + FG FSF +
Sbjct: 410 LGHKKHLLDVQYRMHPSISRFPYKEFYGGRIKDAANVQESIYQKR-FLQGNMFGSFSFIN 468
Query: 603 IHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQER 662
+ GKE G S N+ EV V + L + + K + +I+PY+ QV+ QER
Sbjct: 469 VGRGKEEFGDGD-SPKNMVEVAVVSEIISNLFKVSRERKMKMSVGVITPYKGQVRAIQER 527
Query: 663 FKETFGVESQKV--VDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRA 720
++ + S ++ V++ +VDG QG E+D+ I S VR++ +GFL++ +R NV +TRA
Sbjct: 528 IRDKYSSLSGELFTVNVRSVDGFQGGEEDIIIISTVRSNSNGKVGFLSNRQRANVALTRA 587
Query: 721 KSSILVVGCASTL-REDKHWNNLVKSAEKQDCLF 753
+ + V+G STL R W NL+ ++++ C +
Sbjct: 588 RHCLWVIGNESTLARSGSIWANLISDSKRRKCFY 621
>gi|167516556|ref|XP_001742619.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163779243|gb|EDQ92857.1| predicted protein [Monosiga brevicollis MX1]
Length = 856
Score = 177 bits (450), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 127/396 (32%), Positives = 196/396 (49%), Gaps = 31/396 (7%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENI--RSYTPKIVRIGLKAHHSVNSVAIDHLVEQ 432
+VLVCAPSN A+D++ ++ TG++ + +S R+ + H+ H Q
Sbjct: 415 KVLVCAPSNIAVDQLTEKIHRTGVKVLRVCAKSREEADTRVSFLSLHNQVRTMKGHPEYQ 474
Query: 433 KR--------DDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGF 484
K + S AD+++ R + I +L A ++C T + +G +S F
Sbjct: 475 KLLKLKDAVGELSEADEKRF---RTLQRIIEQELLRSADVICCTCAAAGDRRVS--GQTF 529
Query: 485 DVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQR 544
V+IDEA Q+ EP ++PL G +Q +VGD QL V+ A G SLF+R
Sbjct: 530 RTVLIDEATQSTEPECMLPLVLGTRQCVMVGDHCQLGPVVMCKKAASAGLSQSLFERCVL 589
Query: 545 AGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVED--YTTRDWHEYRCFGPFSFFD 602
G L+ QYRMHP + FPS FY+ +L++G + D+ P F+
Sbjct: 590 LGIRPVRLQVQYRMHPCLSEFPSNTFYEGSLQNGVTASERLMPAVDFPWPVPETPMMFY- 648
Query: 603 IHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSS---SQLAIISPYRHQ---V 656
G+E A S++N E V K+++ + LKS Q+ I++PY Q +
Sbjct: 649 ASMGQEEISASGTSYLNRTEAANV----EKMVTRF--LKSGVTPEQIGIVTPYEGQRAYI 702
Query: 657 KQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVG 716
Q+ F T + V++ +VD QGREKD I SC R+++ + IGFL D RR+NV
Sbjct: 703 VQYMS-FNGTLRQPLYEAVEVASVDAFQGREKDYIILSCTRSNEHQGIGFLNDPRRLNVA 761
Query: 717 ITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
+TRAK I++VG L + WNNL+ ++ CL
Sbjct: 762 LTRAKYGIIIVGNPKVLSKQALWNNLLVHYKENGCL 797
>gi|221055203|ref|XP_002258740.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
gi|193808810|emb|CAQ39512.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
Length = 1734
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 143/490 (29%), Positives = 224/490 (45%), Gaps = 118/490 (24%)
Query: 375 RVLVCAPSNSALDEIVLRLLNT--GIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQ 432
R+LVCAPSN+A+DEI+ RL+++ GI DE+ + P + RIG +V++ ++ +E
Sbjct: 904 RILVCAPSNAAIDEILRRLISSSNGILDEDGNFFNPIVTRIG----RNVSTDILEFSLEF 959
Query: 433 KRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEA 492
K +++ I+ +L + I+CSTLS S + L FD VIIDEA
Sbjct: 960 KEQLFL-----FLNKKEENKIIKKNLLKTSTIICSTLSASSNTSLVNYIDSFDAVIIDEA 1014
Query: 493 AQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRA----GYP 548
+Q+VE L+PL+ CK++ LVGDP QL ATV S A+ Y SLF+RLQ+ +
Sbjct: 1015 SQSVELDILIPLSFSCKKIILVGDPKQLSATVFSLFAKRRMYARSLFERLQKKHKMNKWK 1074
Query: 549 VKMLKTQYRMHPEVRSFPSREFYDEALEDG---------------------SDVEDYTTR 587
+L QYRMHP++ FP++ +Y + D +D+ D T
Sbjct: 1075 YNLLSIQYRMHPDISYFPNKYYYRNKITDAPYFLFTLFKEMKMNKYIANLKNDLRDQHTG 1134
Query: 588 DWHEYRCFGPFSFF----------------DIHEGKESQPA------------------- 612
E F F F DI+ +++Q A
Sbjct: 1135 AIIERESFYKFDLFHFMQNNFGNLLPPNFHDIYLCQKNQGAIDWFSIPLLRHSVFYDISF 1194
Query: 613 -----GSGSWINIDEVDFVL--LLFHKLISMYPQLKS-SSQLAIISPYRHQ---VKQFQE 661
S+INI+E + VL + F I +K ++ II+PY + +K+ +
Sbjct: 1195 SKQRKIKNSYINIEESEAVLQFIEFLHFIFTAENVKEWYKRIGIITPYATEKFFLKKELK 1254
Query: 662 RF--KETFGVESQKVVDITTVDGCQGREKDVAIFSCVRA----------------SDKKS 703
RF K+ + +DI TVDG QG EKD+ IF CVR SD +
Sbjct: 1255 RFFTKKGYKNNISNFIDIGTVDGFQGTEKDIIIFVCVRTKGSLKRRKKKKDNEADSDAAN 1314
Query: 704 IG------------------FLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKS 745
I F + Y+R+NV +TRAK ++ + G S L++ W ++K
Sbjct: 1315 ISSASSVEDNVDDEVDDSNMFFSSYKRLNVALTRAKYNLFIFGNCSFLKKCDAWGKIIKH 1374
Query: 746 AEKQDCLFRV 755
+ ++ + ++
Sbjct: 1375 YKMRNKVIKI 1384
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 34/53 (64%)
Query: 245 IPGLLHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAIL 297
IP L +N QL AI+ ++ + LIQGPPGTGKT TILG++SA++
Sbjct: 604 IPEALKNKFLSMYNKYQLRAINNSIMNEGITLIQGPPGTGKTTTILGIISALI 656
Score = 44.3 bits (103), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Query: 20 IILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKAQ 79
IIL W+Y+ ++ +E + K + + + + D Y++ +Y ++ PL E +
Sbjct: 84 IILRWNYYTSLRSEKELDSNGVKNRLKINVDIYTLPDVYRNFQEYFYSYFPLFLIETQQL 143
Query: 80 IIQKKDEEEVQEWKLRLVMECGEADGFHLP-SVTYEADEVESISPNDLLLL 129
I KK+ E ++E+ + L+ E F ++ Y++ ++ DL++L
Sbjct: 144 INNKKENENIKEYDVTLLNTPKEIYNFEFTINIAYDSLLYSNLFYGDLIIL 194
>gi|356551976|ref|XP_003544348.1| PREDICTED: uncharacterized protein LOC100806346 [Glycine max]
Length = 975
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 111/300 (37%), Positives = 164/300 (54%), Gaps = 10/300 (3%)
Query: 460 NEAVIVCSTLSFSGS-ALLSKLNHGFDVVIIDEAAQAVEPATLVPLAT-GCKQVFLVGDP 517
N ++I+C+ SGS L ++ VIIDEAAQ E +++PL G K + LVGD
Sbjct: 648 NASIILCTA---SGSIKLYAEDMTPIKYVIIDEAAQLKECESVIPLKLPGLKHIILVGDE 704
Query: 518 VQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALED 577
QLPA V S +AE +G SLF+RL G ML QYRMHP + FP EFYDE + D
Sbjct: 705 KQLPALVKSKIAEKADFGRSLFERLVLLGDSKHMLNVQYRMHPSISLFPFSEFYDEKISD 764
Query: 578 GSDV--EDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLIS 635
G +V Y R + E +G +SF ++ +GKE G S N+ E + + L
Sbjct: 765 GPNVLERSYNER-FLEGEMYGSYSFINVSKGKEQFGRGGYSSKNMVEAAVISEIIRSLKK 823
Query: 636 MYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKV-VDITTVDGCQGREKDVAIFS 694
Y + + + IISPY QV + +E+ ++ V + +VDG QG E+D+ I S
Sbjct: 824 EYLRSRKKVSIGIISPYNAQVYEIKEKVEKYNSVSFPDFSFSVRSVDGFQGGEEDIIIIS 883
Query: 695 CVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTL-REDKHWNNLVKSAEKQDCLF 753
VR++ +GFL++ +R NV +TRA+ + ++G A+TL D W +V A+ +DC +
Sbjct: 884 TVRSNGSGKVGFLSNRQRANVALTRARYCLWIIGNATTLVNSDSVWRKVVLDAKIRDCFY 943
>gi|406607433|emb|CCH41224.1| ATP-dependent helicase NAM7 [Wickerhamomyces ciferrii]
Length = 1038
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 129/407 (31%), Positives = 208/407 (51%), Gaps = 54/407 (13%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHL----V 430
R+LVCAPSN A+D + +L G+ K++R+ K+ V S ++ HL +
Sbjct: 494 RILVCAPSNVAVDHLASKLDQLGL----------KVIRLTAKSREDVES-SVQHLSLSNI 542
Query: 431 EQK------------RDD----SAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGS 474
QK R++ SA D + + + ++ +IL +A +VC+T +G
Sbjct: 543 IQKSAKGQLKKLLRLRNELGELSAEDTKTYFTLLRKKEK---SILKQADVVCATCVGAGD 599
Query: 475 ALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGY 534
L +N F ++IDE+ QA EP L+PL G KQV LVGD QL ++ A G
Sbjct: 600 RRLENVN--FRTILIDESTQASEPECLIPLVHGAKQVILVGDHQQLGPVILDKKAGDAGL 657
Query: 535 GTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRD----WH 590
SLF+RL G+ L+ QYRM+P + F S FYD +L++G E + W
Sbjct: 658 KQSLFERLVVLGHVPIRLEVQYRMNPCLSEFSSNMFYDGSLQNGVTKEQRQLPNSAFPWP 717
Query: 591 EYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLI--SMYPQLKSSSQLAI 648
P F+ + G+E S++N E + +L + P+ Q+ +
Sbjct: 718 VVDT--PMMFW-ANFGREEISGSGTSFLNRIEAMNCERIITRLFRDGVQPE-----QIGV 769
Query: 649 ISPYRHQVKQFQERFKETFGVESQKV---VDITTVDGCQGREKDVAIFSCVRASDKKSIG 705
I+PY Q + + ++ + G + + V++ +VD QGREKD I SCVRA+D+++IG
Sbjct: 770 ITPYEGQ-RAYVVQYMQMNGSMDKDLYMDVEVASVDAFQGREKDFIILSCVRANDQQNIG 828
Query: 706 FLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
FL+D RR+NV +TRAK ++++G L +++ WN L+ ++ CL
Sbjct: 829 FLSDPRRLNVALTRAKYGVVILGNPRALSKNQLWNQLLLHYREKGCL 875
>gi|356510822|ref|XP_003524133.1| PREDICTED: uncharacterized protein LOC100802419 [Glycine max]
Length = 2812
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 114/350 (32%), Positives = 179/350 (51%), Gaps = 17/350 (4%)
Query: 418 HHSV-NSVAIDHLVEQKRDDSAADKQKHGAT--------RKDRDSIRSAILNEAVIVCST 468
H+S +SV +++L+ + R D + + + +++SIR L + ++ ST
Sbjct: 504 HNSCESSVGVEYLLYKSRTDCLSSLRTLKGSLDELSLPNSMNKESIREFCLQTSSLIFST 563
Query: 469 LSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLAT-GCKQVFLVGDPVQLPATVISP 527
S S L S + V++IDEAAQ E +++PL + LVGD QLPA V S
Sbjct: 564 AS-SSFKLHSVVMEPLKVLVIDEAAQLKECESIIPLLLPNVEHAVLVGDECQLPAMVASN 622
Query: 528 VAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR 587
V+ +G+G SLF RL G+P L QYRMHP + SFP+ FY + D +V R
Sbjct: 623 VSHKVGFGRSLFARLSSLGHPNHFLNIQYRMHPAISSFPNSHFYFNQILDAPNVVRKNYR 682
Query: 588 DWHEYR---CFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSS 644
+Y FGP+SF ++ G E S N+ EV V+ + + K +
Sbjct: 683 K--QYLPGPMFGPYSFINVVGGIEEFDDAGRSRKNMVEVAIVMKIIKNCFKAWCDSKENL 740
Query: 645 QLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSI 704
+ ++SPY QV Q+ + + V + T+DG QG E+D+ I S VR + S+
Sbjct: 741 SIGVVSPYAAQVVAIQDLLGQRYDTHDGFDVKVKTIDGFQGGERDIIILSTVRTNHSTSL 800
Query: 705 GFLADYRRMNVGITRAKSSILVVGCASTL-REDKHWNNLVKSAEKQDCLF 753
F+++++R NV +TRA+ + V+G TL E+ W +LV A+K+ C F
Sbjct: 801 QFISNHQRTNVALTRARYCLWVLGNERTLTNEENVWKSLVLDAKKRRCFF 850
>gi|345567573|gb|EGX50503.1| hypothetical protein AOL_s00075g232 [Arthrobotrys oligospora ATCC
24927]
Length = 1147
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 134/401 (33%), Positives = 207/401 (51%), Gaps = 41/401 (10%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNS-VAIDHLVEQK 433
+VLVCAPSN A+D++ E I + K+VR+ K+ V S V+ L EQ
Sbjct: 495 QVLVCAPSNVAVDQLT----------EKIHRTSLKVVRLTAKSREDVESQVSFLSLHEQV 544
Query: 434 RDDSAAD--------KQKHGAT-----RKDRDSIRSA---ILNEAVIVCSTLSFSGSALL 477
R ++ K + G +K + R+A IL A ++C T +G L
Sbjct: 545 RINNTNVELVKLRQLKDELGELSLQDEKKFKHLTRAAEKEILTNADVICCTCVGAGDPRL 604
Query: 478 SKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTS 537
+K F V+IDE+ Q+ EP ++PL GCKQ+ LVGD QL +++ A G S
Sbjct: 605 AKFK--FRTVLIDESTQSAEPECMIPLVLGCKQLVLVGDHQQLGPVIMNKKAARAGLHQS 662
Query: 538 LFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR--DWHEYRCF 595
LF+RL G L QYRMHP + FPS FY+ +L++G V++ R D+
Sbjct: 663 LFERLVILGCAPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGVTVQERLRRNVDFPWPVVD 722
Query: 596 GPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLK-SSSQLAIISPYRH 654
P F+ + G E A S++N E K+IS + + S SQ+ II+PY
Sbjct: 723 SPMMFWS-NLGNEEISASGTSYLNRTEAAAC----EKIISKFFKAGVSPSQIGIITPYEG 777
Query: 655 QVKQFQERFKETFGVESQKV---VDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYR 711
Q + + +T G +++ +++ +VD QGREKD + SCVR++D + IGFL D R
Sbjct: 778 Q-RSYIVSSMQTNGSHKKELYKDIEVASVDAFQGREKDYIVLSCVRSNDHQGIGFLNDPR 836
Query: 712 RMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
R+NV +TRAK ++++G L + W++L+ ++ +CL
Sbjct: 837 RLNVALTRAKYGVVILGNPKVLSKHPLWHHLLLHYKEHNCL 877
>gi|393219539|gb|EJD05026.1| P-loop containing nucleoside triphosphate hydrolase protein
[Fomitiporia mediterranea MF3/22]
Length = 791
Score = 177 bits (448), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 125/366 (34%), Positives = 175/366 (47%), Gaps = 59/366 (16%)
Query: 451 RDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQ 510
R+SI I +A ++C+T S S L ++ F VV +DEA+ + EPA+L+PL GCK
Sbjct: 422 RESIFYDICTKADVICTTSIRSASYYLQTMD--FPVVFLDEASMSTEPASLIPLMKGCKH 479
Query: 511 VFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAG-YPVKMLKTQYRMHPEVRSFPSRE 569
+ L+GD QLP V+S A+ SLF+RL G P ML QYRMHP + FPS E
Sbjct: 480 LALIGDHKQLPPVVVSRDAQQGELDVSLFERLISEGDVPSVMLDVQYRMHPGISKFPSME 539
Query: 570 FYDEALEDGSDVEDYTTRDW----------HEYRCFGPFSFFDIHEGKESQPAGSGSWIN 619
FYD L DG+ H P F HEG E+ S S +N
Sbjct: 540 FYDTMLLDGTVHAGEVIPSLMPLSSSHLVAHPETGHRPSVIFIDHEGPEA--TKSRSRVN 597
Query: 620 IDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVK----------QFQERFKETFGV 669
E + + L+ + P L + +I+PY+ Q+ + ++ FK G
Sbjct: 598 WTEGYIICSIVEDLLRLNPDLLGED-IGVIAPYKSQMNLLTRLLKKDDEVRDHFKAHLGD 656
Query: 670 ESQKV--VDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVV 727
+ +V +++ TVDG +GREK IFS VR + IGFLAD RR+NVG+TRAK ++ VV
Sbjct: 657 RALEVPNIEVKTVDGFEGREKQAIIFSTVRNNQFGHIGFLADRRRLNVGLTRAKRALFVV 716
Query: 728 GCASTLREDKH-----------------------WNNLVKSAEKQDCLFR--------VS 756
G STL K+ W N + +Q+ ++R V
Sbjct: 717 GSMSTLERGKYGYRSSNVDVPEQEFRTVSKGALAWRNYAQHLVEQNLVYRLRGDDLVKVL 776
Query: 757 KPYASF 762
PY SF
Sbjct: 777 LPYTSF 782
>gi|242062912|ref|XP_002452745.1| hypothetical protein SORBIDRAFT_04g031650 [Sorghum bicolor]
gi|241932576|gb|EES05721.1| hypothetical protein SORBIDRAFT_04g031650 [Sorghum bicolor]
Length = 956
Score = 177 bits (448), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 105/279 (37%), Positives = 146/279 (52%), Gaps = 12/279 (4%)
Query: 484 FDVVIIDEAAQAVEPATLVPLAT-GCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRL 542
F+V+++DEAAQ E +L+P+ G + L+GD QLPA V S V E +G SLF RL
Sbjct: 638 FEVLVVDEAAQLKECESLIPMQLPGVRHAVLIGDEYQLPALVKSKVCEDAEFGRSLFVRL 697
Query: 543 QRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGP----F 598
G P +L QYRMHP + FP FYD + DG +V R++ GP +
Sbjct: 698 TSLGQPKHLLDVQYRMHPWISKFPVESFYDGRITDGPNV---LKRNYERRHLSGPMYGSY 754
Query: 599 SFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQ 658
SF +I G ES S IN E V+ + +L K ++ ++SPY+ QV+
Sbjct: 755 SFINIDSGNESTGKHDRSLINSIEAAAVVRILQRLFKESVDTKRGVRVGVVSPYKGQVRA 814
Query: 659 FQERFKETFGVESQK---VVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNV 715
QE+ + V + +VDG QG E+DV IFS VR++ IGFLAD R NV
Sbjct: 815 IQEKITGAALAAHEGGLFSVKVRSVDGFQGAEEDVIIFSTVRSNKAGKIGFLADINRTNV 874
Query: 716 GITRAKSSILVVGCASTLREDKH-WNNLVKSAEKQDCLF 753
+TRAK + ++G A TL K W +V A+ + C F
Sbjct: 875 ALTRAKHCLWILGNAKTLASAKTIWRGIVADAKDRGCYF 913
>gi|307194974|gb|EFN77064.1| Probable helicase senataxin [Harpegnathos saltator]
Length = 1415
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 150/545 (27%), Positives = 247/545 (45%), Gaps = 86/545 (15%)
Query: 258 NASQLEAIH---EGLLRK--AFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLRE 312
N QLEA+ + +++K LIQGPPGTGK++ I+ L++ IL+ R HS +
Sbjct: 895 NQKQLEAVFRVTDAVMKKQAKLCLIQGPPGTGKSKVIVNLVAQILYG--EREHSNASEKN 952
Query: 313 --IKRGPELP---------------MHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFP 355
+ P + +KYN+ N++ + P
Sbjct: 953 KILLCAPSNAAIDEIVTRLLVIRSYLKQKYNYTF-------------NLVRFGRPEHMHP 999
Query: 356 TTGNELKPEVVNSSRRYRVRVLVCAPSNSALD--------EIVLRLLNTGIRDENIRSYT 407
N PE+ R +VC SNS + E + LL +R+ S
Sbjct: 1000 LAKNISAPELARRHLRKFTESVVCWSSNSTTNRMSEKTKLERQIDLLQATLRNPASLS-- 1057
Query: 408 PKIVRIGLKAHHSVNSVAIDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCS 467
+ R +K + S + L+ K + K ++ R D IL A I+
Sbjct: 1058 -EARRREIKRKLTDASSRYELLLTGKLFEEIDQKDRNKFQRPSED----VILAGADIIAC 1112
Query: 468 TLSFSGSALLSKL----NHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPAT 523
TLS + + + V I+DEA Q+ E TL+PL G + LVGDP QLPAT
Sbjct: 1113 TLSSCYTNQMESIFGANREKLSVCIVDEATQSCEAETLIPLMLGVNTLVLVGDPNQLPAT 1172
Query: 524 VISPVAEHLGYGTSLFKRLQRA-----GYPVKMLKTQYRMHPEVRSFPSREFYDEALEDG 578
++S A+ LG S+F R+QRA P+ ML TQYRM + +P+R FYD L++
Sbjct: 1173 ILSQRAKKLGLDQSIFSRMQRAFTSQTNNPIIMLDTQYRMAYSISYWPNRYFYDCKLKNA 1232
Query: 579 SDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYP 638
+++ + +H YR S + + N E +FV + + ++ +Y
Sbjct: 1233 TELR--ISFPFHPYRVLSHNSV-----------QNNDRFSNTTEAEFVSNMIYAML-IYA 1278
Query: 639 QLKSSSQ---LAIISPYRHQVKQFQERFKETF-----GVESQKVVDITTVDGCQGREKDV 690
+ + +++ L +++PY +Q + E + + ++ TVD QG+E+D+
Sbjct: 1279 KWEDTNEPVTLGVLTPYNNQRTVVLNKINEKISNLPENMRKKIAYEVNTVDSFQGQERDI 1338
Query: 691 AIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQD 750
I SCVR+ IGF++D +R+ V +TRAK S+++ G +T +D+ WN+L+ A +
Sbjct: 1339 IIMSCVRS---HGIGFMSDKQRLCVALTRAKHSLILCGNFNTFMKDQMWNSLLSDARSRG 1395
Query: 751 CLFRV 755
L V
Sbjct: 1396 VLCNV 1400
>gi|168705200|ref|ZP_02737477.1| DNA-binding protein SMUBP-2 [Gemmata obscuriglobus UQM 2246]
Length = 766
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 141/425 (33%), Positives = 198/425 (46%), Gaps = 67/425 (15%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQKR 434
+VL CAPSN A+D ++ +LL G+ + +R P V L+A AID L E+
Sbjct: 360 KVLACAPSNHAVDNLLEKLL--GVGELPVRLGHPARVMPELRAR------AIDILAEKHP 411
Query: 435 DDSAADKQKHGA---------------------------------TRKDRDSIRSAILNE 461
D A K A R+ S +L+E
Sbjct: 412 DARQARKVAREAFALFRQADKWTREKPQPGEKAALRKEAREMLTEVRRLEASATERVLDE 471
Query: 462 AVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLP 521
A +VC+TL+ S LL + FDVV+IDEA Q+ EPA VPL K V L GD QLP
Sbjct: 472 ARVVCATLTGLDSQLLGQRR--FDVVVIDEACQSTEPAAWVPLLRANK-VVLAGDHCQLP 528
Query: 522 ATVISPVAEHLGYGTSLFKRLQRAGYP--VKMLKTQYRMHPEVRSFPSREFYDEALEDGS 579
TV+SP A G SL +RL R P ++L Q+RMH V F + EFYD L
Sbjct: 529 PTVLSPEAAERGLSVSLMERLVRQFGPGASRLLTVQHRMHAAVMGFSNGEFYDSQLVAHE 588
Query: 580 DVEDY-------TTRDWHEYRCFGPFSFFDIHEGK--ESQPAGSGSWINIDEVDFVLLLF 630
V + RD P F D E +GS N E +
Sbjct: 589 SVAAHLLCHLPGVARDPLTET---PVQFIDTAGASYDEELEEDTGSRFNAQEATLAVKKV 645
Query: 631 HKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDV 690
L+++ + SQ+ +I+PYR QV+ +E+ + G+E I +VDG QGREK+
Sbjct: 646 RALLALG---IAPSQIGLITPYRAQVRLLREKLADVPGLE------IDSVDGFQGREKEA 696
Query: 691 AIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQD 750
+ S VR++++ IGFL+D RR NV TRA+ +LV+G ++TL D + ++ E+
Sbjct: 697 IVVSLVRSNNEGEIGFLSDTRRTNVAFTRARRKLLVIGDSATLASDPFYQRMLTYFEQIG 756
Query: 751 CLFRV 755
L V
Sbjct: 757 ALNSV 761
>gi|402470074|gb|EJW04529.1| hypothetical protein EDEG_01257 [Edhazardia aedis USNM 41457]
Length = 534
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 111/328 (33%), Positives = 173/328 (52%), Gaps = 22/328 (6%)
Query: 436 DSAADKQKHGATRKDRDSIR----SAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDE 491
D K H + D D+++ IL+ A ++C T SG +L K + V+IDE
Sbjct: 195 DRKKSKTAHLESNSDDDALKYKMMRKILDNADVICCTCVTSGQKILKK--YDIPYVLIDE 252
Query: 492 AAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKM 551
A Q EP +++PLA GC+++ LVGD QL ++ A G +LF+RL + G +
Sbjct: 253 AVQCTEPLSIIPLAYGCRKLILVGDHKQLGPIILDKKAAKAGLKETLFERLIKLGNLPFL 312
Query: 552 LKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPF-SFFDIHEGKESQ 610
L QYRMHP++ +PS FY+ +L++G + R PF +FF + G E
Sbjct: 313 LNMQYRMHPKLAEWPSNTFYEGSLKNG------ISESKRLNRTVLPFPTFFYVCYGLEEL 366
Query: 611 PAGSGSWINIDEVDFVLLLFHKLI-SMYPQLKSSSQLAIISPYRHQVKQFQERF-KETFG 668
A S++N E L+ ++I S+ S Q+ +I+PY Q R K +
Sbjct: 367 SASGTSYLNQTEA----LVTEEIIKSLVKSGISEKQIGVITPYEGQRVFILNRLTKTSLK 422
Query: 669 VESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVG 728
+E+ ++I VD QGREKD I S VR++ K+ IGFL D RR+NV +TRAK ++G
Sbjct: 423 LEN---LEIKNVDAYQGREKDYIIISLVRSNQKQGIGFLNDERRLNVTLTRAKYGCCIIG 479
Query: 729 CASTLREDKHWNNLVKSAEKQDCLFRVS 756
+TL ++K W N + + +D +++ S
Sbjct: 480 NPNTLYKNKMWANFINFYQDRDMIYKGS 507
>gi|302143702|emb|CBI22563.3| unnamed protein product [Vitis vinifera]
Length = 956
Score = 176 bits (446), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 154/516 (29%), Positives = 245/516 (47%), Gaps = 59/516 (11%)
Query: 276 LIQGPPGTGKTQTILGLLSAILHA---TPARVHSKGGLREIKRGPELPMHE--KYNHWGR 330
LI+GPPGTGKT T+ LL A+L T A + + E+ + E +Y+ +G
Sbjct: 275 LIKGPPGTGKTNTVGSLLCALLGMKCRTLACAPTNIAVLEVAARVLSLVEESLEYDAYGL 334
Query: 331 ASPWLVGANPRDNIMPIDGD----DGFFPTTGNELKPEVVNSSRRYRVRVLV-CAPSNSA 385
L G++ M ID D D F T R R+LV C +S
Sbjct: 335 GDIVLFGSSEG---MNIDDDSDLHDVFLDT----------------RARILVRCFARHSG 375
Query: 386 LDEIVLRLLNT--GIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQKRDDSAADKQK 443
+ ++N G ++++ + K R ++ S I +VE K + +K
Sbjct: 376 WKHCLESMINLLEGTKEDHEKLEICK-EREEVQYFEDPKSKKIWKMVEDK-GELTQNKNN 433
Query: 444 HGATRK------------------DRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFD 485
AT + D I+ L +A ++ T S S L K +
Sbjct: 434 RVATEECLQSLKCLCKKITLPNFYTDDKIKKFCLEKACLLFCTAS-SSVKLKMKGMTPVE 492
Query: 486 VVIIDEAAQAVEPATLVPLA-TGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQR 544
+++IDEAAQ E + +PL +G + LVGD +QLPA V S ++E G+G SLF+RL
Sbjct: 493 LLVIDEAAQLKECESTIPLQISGLRHAILVGDEMQLPALVKSKISEKAGFGRSLFERLVL 552
Query: 545 AGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYT-TRDWHEYRCFGPFSFFDI 603
+ +L QYRMHP + FP++EFY+ + D +V+D + + + + +GP+SF ++
Sbjct: 553 LKHEYHLLNIQYRMHPSISFFPNKEFYENQISDAPNVKDRSYEKQFLQGSMYGPYSFVNV 612
Query: 604 HEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERF 663
GKE S N+ EV V + L K + +ISPY+ QV QE+
Sbjct: 613 AYGKEEFENHSSR--NMVEVAVVSEVVTSLFKESVSKKQKVSVGVISPYKAQVIAIQEKL 670
Query: 664 KETFGVESQK--VVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAK 721
+ + + ++ V + TVDG QG E+DV I S VR ++K +GFL+ +R NV +TRA+
Sbjct: 671 GKIYNTDEERDFSVKVCTVDGFQGGEEDVIIISTVRGNEKGLVGFLSKRQRANVSLTRAR 730
Query: 722 SSILVVGCASTL-REDKHWNNLVKSAEKQDCLFRVS 756
+ + G + TL W +V+ A+++ C + S
Sbjct: 731 HCLWIFGESETLVASGTVWKRVVEDAKERGCFYNAS 766
>gi|429963217|gb|ELA42761.1| hypothetical protein VICG_00076, partial [Vittaforma corneae ATCC
50505]
Length = 812
Score = 176 bits (446), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 124/395 (31%), Positives = 203/395 (51%), Gaps = 40/395 (10%)
Query: 374 VRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQK 433
+++L+CAPSN+A+D +V RL +GI++ +R+G + V+ +++LV +
Sbjct: 452 LKILICAPSNTAIDVVVTRLA-SGIKNFRGGVTHVSFLRVGASTNPDVHKYTLEYLVNR- 509
Query: 434 RDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLS--FSGSALLSKLNHGFDVVIIDE 491
+ R R ++++ A ++C+TLS S S LSK FD++IIDE
Sbjct: 510 ------------CASQPRSGHRHSLVSTASVICATLSSSVSDSICLSK----FDLIIIDE 553
Query: 492 AAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKM 551
A QA E +T++P +V ++GDP QLP TVIS ++ SLF+RL PV M
Sbjct: 554 ACQATELSTIIPFKYNPNKVIMIGDPNQLPPTVISDQSQ---LQVSLFERLLSHHQPV-M 609
Query: 552 LKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRD-WHEYRCFGPFSFFDIHEGKESQ 610
L QYRMHP++ S FYD +E +D+ + + + F P +F DI K+ +
Sbjct: 610 LDVQYRMHPDICKLSSLFFYDNRIETFADIAQLRRKSGYGDIYGFRPLNFIDILV-KQEK 668
Query: 611 PAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQF-QERFKETFGV 669
S+ N E + +L Y ++ ++A+++PY+ Q + R E G+
Sbjct: 669 IDDFKSYYNPVECSICYRISKELFRRY---GNTLKIAVLTPYKGQANMLMKNRNYEKMGI 725
Query: 670 ESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGC 729
E I T+DG QG+E DV I S VR + +GF D+RR+NV +TR++ ++++G
Sbjct: 726 E------INTIDGFQGKECDVVILSTVR---RFGLGFTCDFRRINVAMTRSRVCLILLGN 776
Query: 730 ASTLREDKHWNNLVKSAEKQDCLFRVSKPYASFFS 764
L + W+ ++ +Q F SK F S
Sbjct: 777 KKCLSQSSVWSGIIDYITQQGQYF-TSKSLELFLS 810
>gi|409045768|gb|EKM55248.1| hypothetical protein PHACADRAFT_28301 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1067
Score = 176 bits (446), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 127/404 (31%), Positives = 204/404 (50%), Gaps = 55/404 (13%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNS----------- 423
+VLVCAPSN A+D++ ++ TG+ K+VR+ K+ +++S
Sbjct: 489 QVLVCAPSNVAVDQLTEKIHATGL----------KVVRLTAKSREALDSSVAFLTLHQQV 538
Query: 424 ------VAIDHLVEQKRDD---SAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGS 474
V + L++ K + S+ D++K+ A + IL+ A ++C T +G
Sbjct: 539 ANNTTHVELQKLIQLKNEQGELSSNDERKYKALIRQ---CEKEILSAADVICCTCVGAGD 595
Query: 475 ALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGY 534
LSKL F V+IDEA QA EP GCKQV LVGD QL +++ A G
Sbjct: 596 PRLSKLK--FRTVLIDEATQAAEP--------GCKQVVLVGDHQQLGPVIMNKKAARAGL 645
Query: 535 GTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDW-HEYR 593
SLF+RL G L+ QYRMHP + FPS FY+ L++G + ++ +
Sbjct: 646 TQSLFERLVVLGNRPIRLQVQYRMHPCLSEFPSNMFYEGTLQNGVTAPERLRKNVDFPWP 705
Query: 594 CFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSS---SQLAIIS 650
FF + G+E + S++N E V K+++ + KS +Q+ +++
Sbjct: 706 VPDTPMFFYQNLGQEEISSSGTSFLNRTEASNV----EKIVTKF--FKSGVVPNQIGVVT 759
Query: 651 PYRHQVKQFQE--RFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLA 708
PY Q +F T + K +++ +VD QGREKD I SCVR+++ + IGFL
Sbjct: 760 PYEGQRSYIVNYMQFNGTLKKDLYKEIEVASVDAFQGREKDYIILSCVRSNEHQGIGFLN 819
Query: 709 DYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
D RR+NV +TRAK ++++G L + W+ L+ ++++CL
Sbjct: 820 DPRRLNVALTRAKYGVVILGNPKVLSKHPLWHYLLTHYKEKNCL 863
>gi|213408485|ref|XP_002175013.1| ATP-dependent helicase NAM7 [Schizosaccharomyces japonicus yFS275]
gi|212003060|gb|EEB08720.1| ATP-dependent helicase NAM7 [Schizosaccharomyces japonicus yFS275]
Length = 926
Score = 176 bits (445), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 128/394 (32%), Positives = 199/394 (50%), Gaps = 47/394 (11%)
Query: 376 VLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNS-VAIDHLVEQKR 434
VLVCAPSN A+D++ ++ TG+R +VR+ K+ ++S V+ L EQ +
Sbjct: 444 VLVCAPSNVAVDQLAEKIHQTGLR----------VVRVTAKSREDIDSPVSFLSLHEQVK 493
Query: 435 DD-------------------SAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSA 475
+ S AD+++ R SI +L A ++C T +G
Sbjct: 494 NYEGNEEFSRLLKLQNDVGELSLADEKR---LRVLVASIERELLQSANVICCTCVGAGDK 550
Query: 476 LLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYG 535
+SKL F V+IDEA QA EP ++PL KQV LVGD QL V++ A G
Sbjct: 551 RVSKLR--FRAVLIDEATQASEPECMIPLTHVYKQVVLVGDHQQLGPVVMNKKAAQAGLS 608
Query: 536 TSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR--DWHEYR 593
SLF+RL G L QYRMHP + FPS FY+ L++G + R D+ +
Sbjct: 609 QSLFERLIILGNSPIRLTVQYRMHPCLSEFPSNMFYEGTLQNGVTTAERLARYLDFPWPQ 668
Query: 594 CFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLK-SSSQLAIISPY 652
P F+ + G+E A S++N E K+++ + + + Q+ II+PY
Sbjct: 669 PEEPLMFY-ANFGQEEISASGTSYLNRTEASTC----EKIVTQFFKAGVTPEQIGIITPY 723
Query: 653 RHQVKQFQERFKETFGVESQ---KVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLAD 709
Q + + ++ + G + K V++ +VD QGREKD I SCVR+S+ + IGFL++
Sbjct: 724 DGQ-RSYIVQYMQNNGALKKDLYKAVEVASVDAFQGREKDFIILSCVRSSEHQGIGFLSE 782
Query: 710 YRRMNVGITRAKSSILVVGCASTLREDKHWNNLV 743
RR+NV +TRA+ ++V+G L + W + +
Sbjct: 783 PRRLNVALTRARYGVIVLGNPKVLAKHALWYHFI 816
>gi|321463387|gb|EFX74403.1| hypothetical protein DAPPUDRAFT_57163 [Daphnia pulex]
Length = 1129
Score = 176 bits (445), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 133/394 (33%), Positives = 206/394 (52%), Gaps = 47/394 (11%)
Query: 376 VLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNS-VAIDHLVEQKR 434
VLVCAPSN A+D++ ++ TG+ K+VR+ K+ +++S V+ L Q R
Sbjct: 497 VLVCAPSNIAVDQLTEKIHRTGL----------KVVRLCAKSREAIDSPVSFLALHNQVR 546
Query: 435 DDSAADKQK-------------HGATRKDRDSIRSA---ILNEAVIVCSTLSFSGSALLS 478
A + + G ++ R R A +L A ++ T +G L+
Sbjct: 547 CLEGASELRKLVQLKEEVGELSQGDEKRYRMLKRQAERELLEAADVLACTCVGAGDVRLA 606
Query: 479 KLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSL 538
++ F ++IDE+ QA EP +VP+ G +Q+ LVGD QL V+ A G SL
Sbjct: 607 RIK--FASILIDESMQATEPECMVPVVLGARQLILVGDHCQLGPVVMCKPAAKAGLSQSL 664
Query: 539 FKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR--DWHEYRCFG 596
F+RL G L+ QYRMHP + FPS FY+ +L++G ED R D+
Sbjct: 665 FERLVVLGIRPFRLEVQYRMHPRLSEFPSNFFYEGSLQNGVCAEDRILRGVDFPWPMPDR 724
Query: 597 PFSFFDIHEGKESQPAGSG-SWINIDEVDFVLLLFHKLISMYPQLKSS---SQLAIISPY 652
P FF + G+E + AGSG S++N E V K+ + + L+S Q+ II+PY
Sbjct: 725 PM-FFYVTLGQE-EIAGSGTSYLNRTEASNV----EKIATRF--LRSGVKPEQIGIITPY 776
Query: 653 RHQVKQFQERFKETFGVESQKV---VDITTVDGCQGREKDVAIFSCVRASDKKSIGFLAD 709
Q + + ++ + G K+ ++I +VD QGREKD+ I SCVR+++ + IGFL D
Sbjct: 777 EGQ-RAYLVQYMQHQGSLHAKLYQDIEIASVDAFQGREKDLIIMSCVRSNENQGIGFLND 835
Query: 710 YRRMNVGITRAKSSILVVGCASTLREDKHWNNLV 743
RR+NV +TRA+ I++VG L + WN+L+
Sbjct: 836 PRRLNVAMTRARYGIIIVGNPKVLAKQPVWNHLL 869
>gi|388580348|gb|EIM20663.1| hypothetical protein WALSEDRAFT_54922 [Wallemia sebi CBS 633.66]
Length = 941
Score = 176 bits (445), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 127/400 (31%), Positives = 198/400 (49%), Gaps = 39/400 (9%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNS-VAIDHLVEQK 433
+VLVCAPSN A+D++ ++ TG+ K VR+ K+ +V+S ++ L EQ
Sbjct: 418 QVLVCAPSNVAVDQLCEKIHLTGL----------KTVRLTAKSREAVDSPISFLTLHEQV 467
Query: 434 RDDSA-ADKQKHGATRKDRDSIRSA---------------ILNEAVIVCSTLSFSGSALL 477
+ + + QK + ++ + S+ ILN A ++C T +G L
Sbjct: 468 ANSTHHIELQKLFMLKNEQGELSSSDERKFKTLTRVCEKEILNAADVICCTCVGAGDPRL 527
Query: 478 SKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTS 537
SKL F V+IDEA QA EP +PL GCKQ LVGD QL +++ A G S
Sbjct: 528 SKLK--FRTVLIDEATQAAEPECTIPLIMGCKQAVLVGDHQQLGPVIMNKKAARAGLTQS 585
Query: 538 LFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDW-HEYRCFG 596
LF+RL G L+ QYRMHP + FPS FY+ L++G + ++ +
Sbjct: 586 LFERLVMLGNRPIRLQVQYRMHPCLSEFPSNMFYEGTLQNGVTAPERLRKNVDFPWPIPD 645
Query: 597 PFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLI--SMYPQLKSSSQLAIISPYRH 654
FF + G+E + S++N E + K + P +Q+ I++PY
Sbjct: 646 TPMFFYQNLGQEEISSSGTSFLNRTEASNCEKIVTKFFKAGVVP-----AQIGIVTPYEG 700
Query: 655 QVKQFQE--RFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRR 712
Q +F E V++ +VD QGREKD I SCVR+++ + IGFL+D RR
Sbjct: 701 QRSYIVNYMQFNGALKKELYNQVEVASVDAFQGREKDYIILSCVRSNEHQGIGFLSDPRR 760
Query: 713 MNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
+NV +TRAK +++G L + W++L+ +++ L
Sbjct: 761 LNVAMTRAKYGAVILGNPKILSKHPLWHHLLTHFKEKKTL 800
>gi|390596463|gb|EIN05865.1| P-loop containing nucleoside triphosphate hydrolase protein
[Punctularia strigosozonata HHB-11173 SS5]
Length = 1024
Score = 176 bits (445), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 114/307 (37%), Positives = 162/307 (52%), Gaps = 30/307 (9%)
Query: 456 SAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVG 515
S +++ A +VC+T S L+ ++ F VV +DEA+ + EPA+L+PL G + + L+G
Sbjct: 660 SDVVHAADVVCTTCITSACTALNVID--FPVVFLDEASMSTEPASLIPLMKGSQHMTLIG 717
Query: 516 DPVQLPATVISPVAEHLGYGTSLFKRLQRAGY-PVKMLKTQYRMHPEVRSFPSREFYDEA 574
D QLP + S A G G SLF+RL G P ML QYRMHP++ FPS EFY+ A
Sbjct: 718 DHKQLPPVITSREAIAGGLGISLFERLTEEGVVPSIMLDLQYRMHPQISKFPSAEFYNFA 777
Query: 575 LEDG---------SDVEDYTTRDWHEYRCFG--PFSFFDIHEGKESQPAGSGSWINIDEV 623
L DG + + T+ G P F H+G ES S +N +
Sbjct: 778 LRDGMLDSSGGVPAQLRPPTSAHLQMNPQTGDRPSVIFLDHQGLES--PKDRSKVNYTDA 835
Query: 624 DFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQF----------QERFKETFGVESQ- 672
D V + L+ P L+ + +I+PY Q++ Q RF+ G +
Sbjct: 836 DIVCSVIEDLLIQNPDLRGED-IGVIAPYVAQIRLLTRLLTTDAKSQARFQAALGDQRAM 894
Query: 673 --KVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCA 730
+DI TVDG +GREKDV IFS VR++ +GFLAD RR+NVG+TRAK + VVG
Sbjct: 895 QLPQIDIKTVDGFEGREKDVIIFSTVRSNSSGHVGFLADRRRLNVGLTRAKRGLFVVGNL 954
Query: 731 STLREDK 737
+TL+ +
Sbjct: 955 NTLKTGR 961
>gi|281208251|gb|EFA82429.1| hypothetical protein PPL_04854 [Polysphondylium pallidum PN500]
Length = 799
Score = 175 bits (444), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 122/382 (31%), Positives = 200/382 (52%), Gaps = 39/382 (10%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHS------VNSVAIDH 428
++LV + +N+ +D ++ LL Y K++R+G H S +N+ H
Sbjct: 393 KILVTSYTNTGVDNLLDGLL----------KYNVKVLRLG---HTSSVRPDLLNATLDHH 439
Query: 429 LVEQ-KRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVV 487
L E K+ + + + +RD+ +S +L++ ++C+T SG +L+ N F +V
Sbjct: 440 LSEAIKQYEKSPNYNPANIANIERDT-KSKLLSQVNVICTTCIASGHPILT--NERFSIV 496
Query: 488 IIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGY 547
I+DEA+QA EPA LVPL +Q+FL GD QL T+ + AE G LF+RL
Sbjct: 497 IVDEASQATEPAILVPLLKQSEQLFLFGDQNQLSPTIFTKEAEDGGLSIGLFQRLANDIT 556
Query: 548 PVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR---DWHEYRCFGPFSFFDIH 604
P +L+ QYRMH ++ FP++ YD L+ G D +D DW +C P +F ++
Sbjct: 557 PF-LLEEQYRMHSKLLEFPNKYIYDGKLKTGIDDKDRQIPRGFDWPREQC--PIAFVNV- 612
Query: 605 EGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFK 664
GKE + S++N+ E ++ + ++ L + S II+PY Q K +
Sbjct: 613 VGKED--INNYSYMNMPEAKEIVRILKAMVKENQDLTTDS-FGIITPYSSQAKLICNLLR 669
Query: 665 ETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSI 724
F +K+ + TVD QGREK++ + S VR++ +GFL D+RR+NV +TRAK +
Sbjct: 670 PDF----RKLPTVATVDSFQGREKEIILVSTVRSNLGGRVGFLNDWRRLNVSLTRAKRGM 725
Query: 725 LVVGCASTLRE--DKHWNNLVK 744
++VG TL + WN ++
Sbjct: 726 IIVGNKQTLESCPCEKWNQYIQ 747
>gi|15668275|ref|NP_247068.1| DNA-binding protein [Methanocaldococcus jannaschii DSM 2661]
gi|2498043|sp|Q57568.1|Y104_METJA RecName: Full=Uncharacterized ATP-dependent helicase MJ0104
gi|1590880|gb|AAB98084.1| DNA-binding protein, probably DNA helicase [Methanocaldococcus
jannaschii DSM 2661]
Length = 663
Score = 175 bits (444), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 154/527 (29%), Positives = 257/527 (48%), Gaps = 85/527 (16%)
Query: 251 EYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLL--------SAILHATPA 302
E+ +N N SQ A+ + +L + LI GPPGTGKT+TI ++ +L +
Sbjct: 179 EFYDKNLNESQKLAVKKAVLSRDLYLIHGPPGTGKTRTITEVIVQEVKFNKHKVLATADS 238
Query: 303 RVHSKGGLRE-IKRGPELPMHEKYNHWGRASPWLVGANPRDNIMP--IDGDDGFFPTTGN 359
+ + L IK+ P+L + + H R S L+ + +P I+ + +
Sbjct: 239 NIAADNILEYLIKKYPDLKVV-RVGHPTRISKDLIQHS-----LPYLIENHEKYQEILAL 292
Query: 360 ELKPEVVNSSRRYRVRVLVCAPS--NSALDEIVLRLLNT-----GIRDENIRSYTPKIVR 412
E + + R + L +P DE +L++ GI E I S I+R
Sbjct: 293 R---EKIKEIKEQRDKFLKPSPRWRRGMSDEQILKVAKRKKSYRGIPKEKIVSMAEWIIR 349
Query: 413 IGLKAHHSVNSVAIDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFS 472
K +N+ +D + E+ I + IL EA ++ +T S +
Sbjct: 350 -NKKIKRIINN--LDEITEK---------------------IMNEILAEADVIVATNSMA 385
Query: 473 GSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHL 532
GS +L FDV++IDE +QA+EP+ L+P+ G +++ + GD QLP TV+S E+
Sbjct: 386 GSEILK--GWEFDVIVIDEGSQAMEPSCLIPIVKG-RKLIMAGDHKQLPPTVLS---ENE 439
Query: 533 GYGTSLFKRLQRAGYP--VKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWH 590
+LF+RL + YP +L+ QYRM+ ++ FP++ FY+ L+ V++ T D
Sbjct: 440 ELKKTLFERLIKK-YPEFSSILEIQYRMNEKIMEFPNKMFYNNKLKADESVKNITLLDLV 498
Query: 591 EYRCFG----------PFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQL 640
+ P F ++ EG E + S S+ NI+E + VL + KL+
Sbjct: 499 KEEEIDEVDRDIINEIPVQFINV-EGIERKDKESPSYYNIEEAEKVLEIVKKLV------ 551
Query: 641 KSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASD 700
K +I+PY QV+ + F+E ++ +++ TVDG QGRE + + S VR
Sbjct: 552 KYKIPTNVITPYDAQVRYLRRLFEE-HNID----IEVNTVDGFQGRENEAIVISFVRT-- 604
Query: 701 KKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAE 747
K+ GFL D RR+NV ITRAK ++++G + L++DK +N ++K A+
Sbjct: 605 -KNFGFLKDLRRLNVAITRAKRKLILIGNENLLKQDKVYNEMIKWAK 650
>gi|406696583|gb|EKC99865.1| hypothetical protein A1Q2_05830 [Trichosporon asahii var. asahii
CBS 8904]
Length = 1018
Score = 175 bits (444), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 129/409 (31%), Positives = 207/409 (50%), Gaps = 64/409 (15%)
Query: 376 VLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAH----------------- 418
VLVCA +N A+D +V L G+ +R +P V ++AH
Sbjct: 582 VLVCAHTNVAVDNLVEGLKTQGV--NAVRFGSPDRVSPRVEAHTLEARIEQHPAYPVLNR 639
Query: 419 -----HSVNSVAIDHLVEQKRDDSAADKQK-HGATRKDRDSIRSAILNEAVIVCSTLSFS 472
S+ + ++L +R+ + K +G + +++ +L+EA +VC+T +
Sbjct: 640 ARNSKESLQAELSENLAGPQREAKQKEIGKLNGRIYLLKRRLQAEVLHEADVVCTTCLSA 699
Query: 473 GSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHL 532
S +L ++ F V +DEA+ A EP ++VPL G QV ++GD QLP ++S A+
Sbjct: 700 TSRVLEVID--FPFVFLDEASMATEPLSIVPLTKGSAQVAIIGDHKQLPPVIVSEAAQQG 757
Query: 533 GYGTSLFKRL-QRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHE 591
G GTSLF+RL P ML TQYRMHP + +F S FY+ L+DG+ V+ H
Sbjct: 758 GLGTSLFERLIHEQAVPSIMLDTQYRMHPSIAAFSSEAFYNGQLKDGTVVDGQVDPVLHP 817
Query: 592 YRCFGPFSFFDIHEGKESQPAGSGSWINID--------------EVDFVLLLFHKLISMY 637
P + F + +G S+ S +++N D E V + L++
Sbjct: 818 -----PTTAFLLPDGDSSK---SLTFLNHDFPESPQNRSIANHHEAGRVCDIVADLLASN 869
Query: 638 PQLKSSSQLAIISPYRHQVK----------QFQERFKETFGVESQKVVD---ITTVDGCQ 684
P LK + + +I+PY Q++ + Q F++ G E + ++ I TVDG +
Sbjct: 870 PDLKGAD-IGVIAPYSAQIRLITEFLTIDERRQRAFRQWLGPERAREIEDIEIRTVDGFE 928
Query: 685 GREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTL 733
GREK V IFS VR++ +GFL D+RR+NVG+TRAK +++++G TL
Sbjct: 929 GREKSVIIFSTVRSNTGGFLGFLGDWRRLNVGLTRAKRALIMLGSLRTL 977
>gi|356518854|ref|XP_003528092.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent helicase NAM7-like
[Glycine max]
Length = 514
Score = 175 bits (444), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 126/422 (29%), Positives = 204/422 (48%), Gaps = 41/422 (9%)
Query: 371 RYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIG----------LKAHHS 420
+ + RVLVCAP+N A+ E+ R++ T +++ + + +G LK
Sbjct: 58 KMKYRVLVCAPTNIAIKEVASRVV-TLVKESHAKESGDLFCSMGDLLLSGNNERLKIGED 116
Query: 421 VNSVAIDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIV----CSTLSFSGSAL 476
+ + +DHL +Q + A + + + ++ SGS
Sbjct: 117 IKDIYLDHLAQQLAECLAPSTGLSSCLKSMIGFLENCTSYYHIVKDEYELGKRKISGSYK 176
Query: 477 LSKLN-HGFDVVIIDEAAQAVEPATLVP-LATGCKQVFLVGDPVQLPATVISPVAEHLGY 534
L+ ++++IDEAAQ + ++ P L G Q LVGD QLP S V G+
Sbjct: 177 RHTLSIKPLNILVIDEAAQLKDXESMTPMLLPGISQAILVGDECQLP----SMVCYEAGF 232
Query: 535 GTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVE--DYTTRDWHEY 592
G SLF+RL G+P +L QYRMHP++RSFP+ FY ++D +VE DY + +
Sbjct: 233 GRSLFERLSSLGHPKYLLNMQYRMHPQIRSFPNSFFYFNQIQDAQNVERNDY-GKHYLPG 291
Query: 593 RCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKL------------ISMYPQL 640
FG SF +I GKE A S+ N+ EV ++ + L I P L
Sbjct: 292 PMFGXLSFINIIRGKEKFEAAGRSYKNMAEVAIIVTILKNLHKSMTVPFGTTDIFSLPWL 351
Query: 641 KSSSQLA--IISPYRHQVKQFQERFKETFGVESQK--VVDITTVDGCQGREKDVAIFSCV 696
S +L+ I+SPY QV QE + + + V++ ++DG QG E+DV I S V
Sbjct: 352 TSKERLSIGIMSPYAGQVTAIQENLGKMYDRHNHDGFNVNVKSIDGFQGGEQDVIILSTV 411
Query: 697 RASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKH-WNNLVKSAEKQDCLFRV 755
R +++ S+ F+A +R NV +TRA+ + ++G L +++ W +V A+ + C F V
Sbjct: 412 RTNNRASLEFIASLQRTNVALTRARHCLWILGNERALTSNENVWKAIVLDAKSRKCFFNV 471
Query: 756 SK 757
+
Sbjct: 472 DR 473
>gi|389583304|dbj|GAB66039.1| hypothetical protein PCYB_082000 [Plasmodium cynomolgi strain B]
Length = 1642
Score = 175 bits (444), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 146/498 (29%), Positives = 224/498 (44%), Gaps = 137/498 (27%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTG--IRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQ 432
R+LVCAPSN+A+DEI+ RL+++G I DEN + P + RIG +V++ ++ +E
Sbjct: 806 RILVCAPSNAAIDEILRRLISSGSGILDENGNFFNPIVTRIG----RNVSTDILEFSLEF 861
Query: 433 KRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEA 492
K +++ I+ +L + I+CSTLS S +A L FD +IIDEA
Sbjct: 862 KEQLFL-----FLNKKEENKIIKKNLLKTSTIICSTLSASSNASLVNYIDSFDAIIIDEA 916
Query: 493 AQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRA----GYP 548
+Q+VE L+PL+ CK++ LVGDP QL ATV S A+ Y SLF+RLQ+ Y
Sbjct: 917 SQSVELDILIPLSFSCKKIILVGDPKQLSATVFSLFAKRRKYARSLFERLQKKHKMNKYK 976
Query: 549 VKMLKTQYRMHPEVRSFPSREFYDEALEDG---------------------SDVEDYTT- 586
+L QYRMHP++ FP++ +Y + D SD+ D T
Sbjct: 977 YNLLSIQYRMHPDISHFPNKYYYRNKITDAPYFLFTLFKEMKMNKYLTKLRSDLGDVQTG 1036
Query: 587 ----RD-WHEYRCFG----------PFSFFDIHEGKESQPA------------------- 612
RD ++++ F P +F DI+ +++Q A
Sbjct: 1037 TIIQRDLFYKFDLFHFMQSNFGNLLPSNFHDINLCQKNQGAIDWFIIPFLRHSVFYDISF 1096
Query: 613 -----GSGSWINIDEVDFVL--LLFHKLISMYPQLKS-SSQLAIISPYRHQVKQFQERFK 664
S+INI+E + VL + F I +K ++ II+PY + ++ K
Sbjct: 1097 SKQRKIKNSYINIEESEAVLQFIEFLHFIFTSENVKEWYKRIGIITPYATEKFFLKKELK 1156
Query: 665 ETFGVESQK-----VVDITTVDGCQGREKDVAIFSCVR-------------------ASD 700
F + K +DI TVDG QG EKD+ IF CVR A+D
Sbjct: 1157 MFFTKKGYKNNISNFIDIGTVDGFQGTEKDIIIFVCVRTKGSLKRKKKKKASAAGSDATD 1216
Query: 701 KK----------------------------------SIGFLADYRRMNVGITRAKSSILV 726
++ S F + Y+R+NV +TRAK ++ +
Sbjct: 1217 QEENVPKISSACSASSASSASSASPAEDHVDDEVDDSNMFFSSYKRLNVALTRAKYNLFI 1276
Query: 727 VGCASTLREDKHWNNLVK 744
G S L++ W ++K
Sbjct: 1277 FGNCSFLKKCDAWGKIIK 1294
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 34/53 (64%)
Query: 245 IPGLLHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAIL 297
IP L +N QL AI+ ++ + LIQGPPGTGKT TILG++SA++
Sbjct: 584 IPEALKNKFLNIYNKYQLRAINNSIMNEGITLIQGPPGTGKTTTILGIISALI 636
Score = 46.2 bits (108), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 56/111 (50%), Gaps = 1/111 (0%)
Query: 20 IILGWDYFRLVKESQERNDKNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKAQ 79
IIL W+Y+ ++ +E + K + + + + D Y++ ++Y ++ PL E +
Sbjct: 84 IILRWNYYTSLRSEKELDSNGVKNRLKINVDIYTLPDVYRNFEEYFYSYFPLFLIETQQL 143
Query: 80 IIQKKDEEEVQEWKLRLVMECGEADGFHLP-SVTYEADEVESISPNDLLLL 129
I KK+ E ++E+ + L+ E F ++ Y++ ++ DL+LL
Sbjct: 144 INNKKENENIKEYNVTLLNTPKEIYNFEFNINIAYDSIVYANLFYGDLILL 194
>gi|388854659|emb|CCF51816.1| related to regulator of nonsense transcripts 1 [Ustilago hordei]
Length = 926
Score = 175 bits (443), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 120/350 (34%), Positives = 175/350 (50%), Gaps = 46/350 (13%)
Query: 451 RDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQ 510
R SIR ILN A ++C + +GS L ++ VV DEA+ A EP +LVPL GC+
Sbjct: 542 RASIRGEILNRADVICGSAIAAGSPELDMID--LPVVFFDEASMATEPVSLVPLMKGCRH 599
Query: 511 VFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAG--YPVKMLKTQYRMHPEVRSFPSR 568
+ ++GD QLP V S A+ G SLF+RL +G P ML Q+RMHP + FP++
Sbjct: 600 LSIIGDHKQLPPVVTSVEAKQGGLSRSLFERLIESGQNIPSTMLNVQFRMHPSLAEFPNK 659
Query: 569 EFYDEALEDGSDVEDYTTRDWHEYRCFGP----------FSFFDIHEGKESQPAGSGSWI 618
FYD AL++G E + +R F D H+G+ES+ S S
Sbjct: 660 AFYDGALQNGKGTEQIAPVESSYWRTRTAGQKKSQDAQRLCFID-HQGRESKTDNSTSLY 718
Query: 619 NIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQV----KQFQ-------ERFKETF 667
N E V+ + ++ PQL + + I++PY Q K Q ++
Sbjct: 719 NTSEARIVVDVVVDVLRRNPQL-TGDDIGIVTPYAGQQILLEKMLQNERSDARKKASSAI 777
Query: 668 GVESQKV--VDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSIL 725
G S ++ +DI TVDG +GREK V +FS VR + +GFLAD RR+NV +TRA+S++
Sbjct: 778 GARSSQLGFIDIHTVDGFEGREKKVILFSTVRTNALGYVGFLADGRRLNVALTRAQSAMF 837
Query: 726 VVGCASTLREDKHWNNLVKSAEKQDCLFRVSKPYASFFSDENLESMRKNA 775
++G T + K+ + RV P NLE++R A
Sbjct: 838 IIGNIDTFK---------KAQLSEAAYSRVESP--------NLEALRNYA 870
>gi|225462691|ref|XP_002267110.1| PREDICTED: uncharacterized protein LOC100257019 [Vitis vinifera]
Length = 1143
Score = 175 bits (443), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 114/311 (36%), Positives = 168/311 (54%), Gaps = 15/311 (4%)
Query: 454 IRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLA-TGCKQVF 512
I+S L AV++ T+S S L K G ++++IDEAAQ E + +PL +G +
Sbjct: 663 IKSLCLKNAVLIFCTVSSSSKLLHIKDMKGIELLVIDEAAQLKECESTIPLQISGIRHAV 722
Query: 513 LVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYD 572
LVGD +QLPA V S E+ + SLF+RL + +L QYRMHP + FP+ EFY+
Sbjct: 723 LVGDEMQLPALVKSKELENTKFERSLFERLVSLRHYKHLLDVQYRMHPSISLFPNNEFYE 782
Query: 573 EALEDGSDVED--YTTRDWHEYRCFGPFSFFDIH----EGKESQPAGSGSWINIDEVDFV 626
+ + V++ Y+ R H +GPFSF ++ E +E S N+ EV V
Sbjct: 783 GDIINAPKVKEAIYSRRFLHG-NMYGPFSFINVASTVPELEEFNVRHSSK--NMVEVAVV 839
Query: 627 LLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGV--ESQKVVDITTVDGCQ 684
+ L K + IISPY+ QV + Q++ + + ESQ + ++TVDG Q
Sbjct: 840 SQIIASLFEETKARKEKVSVGIISPYKAQVHEIQKKLGKAYSTDAESQFSIKVSTVDGFQ 899
Query: 685 GREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKH--WNNL 742
G E+DV I S VR + IGF+ +YRR NV +TRA+ + + G A TL ED H W +
Sbjct: 900 GDEEDVIIISTVRCNSGGHIGFVKNYRRANVSLTRARHCLWITGNAKTL-EDSHSVWEKV 958
Query: 743 VKSAEKQDCLF 753
V+ A+ Q C +
Sbjct: 959 VQHAKGQRCFY 969
>gi|50251911|dbj|BAD27849.1| tRNA-splicing endonuclease positive effector-like [Oryza sativa
Japonica Group]
gi|50251934|dbj|BAD27870.1| tRNA-splicing endonuclease positive effector-like [Oryza sativa
Japonica Group]
Length = 372
Score = 175 bits (443), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 106/294 (36%), Positives = 158/294 (53%), Gaps = 10/294 (3%)
Query: 450 DRDSIRSAIL-NEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLAT-G 507
D+ SI ++ N I+C+ S S L + + FD++++DEAAQ E +L+PL G
Sbjct: 79 DKRSIEDFLVRNAKSILCTASSSSRLHYLPEAS-PFDLLVVDEAAQLKECESLIPLQLPG 137
Query: 508 CKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPS 567
+ L+G QLPA V S V E +G SLF+RL G+P +L QYRMHP + FP
Sbjct: 138 VRHAVLIGYEFQLPALVKSRVCEDAEFGRSLFERLSSLGHPKHLLDVQYRMHPGISKFPV 197
Query: 568 REFYDEALEDGSDVEDYTTRDWHEYRCFGP----FSFFDIHEGKESQPAGSGSWINIDEV 623
FY+ + DG E+ RD+ GP +SF ++ GKES+ S +N EV
Sbjct: 198 SSFYENKISDG---ENVLHRDYERKPLAGPMYGSYSFINVDAGKESKGKHDKSLMNPIEV 254
Query: 624 DFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGC 683
V + +L + ++SPY+ QV+ QER + + V + +VDG
Sbjct: 255 AAVTRIVQRLFKESVDTGRKLCVGVVSPYKGQVRAIQERLGKAYETHGGFTVKVRSVDGF 314
Query: 684 QGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDK 737
QG E+D+ IFS VR++ S+GFL++ R NV +TRAK + ++G A+TL K
Sbjct: 315 QGAEEDIIIFSAVRSNTTGSVGFLSNVNRTNVALTRAKHCLWILGNANTLASSK 368
>gi|302143701|emb|CBI22562.3| unnamed protein product [Vitis vinifera]
Length = 977
Score = 175 bits (443), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 114/311 (36%), Positives = 168/311 (54%), Gaps = 15/311 (4%)
Query: 454 IRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLA-TGCKQVF 512
I+S L AV++ T+S S L K G ++++IDEAAQ E + +PL +G +
Sbjct: 497 IKSLCLKNAVLIFCTVSSSSKLLHIKDMKGIELLVIDEAAQLKECESTIPLQISGIRHAV 556
Query: 513 LVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYD 572
LVGD +QLPA V S E+ + SLF+RL + +L QYRMHP + FP+ EFY+
Sbjct: 557 LVGDEMQLPALVKSKELENTKFERSLFERLVSLRHYKHLLDVQYRMHPSISLFPNNEFYE 616
Query: 573 EALEDGSDVED--YTTRDWHEYRCFGPFSFFDIH----EGKESQPAGSGSWINIDEVDFV 626
+ + V++ Y+ R H +GPFSF ++ E +E S N+ EV V
Sbjct: 617 GDIINAPKVKEAIYSRRFLHG-NMYGPFSFINVASTVPELEEFNVRHSSK--NMVEVAVV 673
Query: 627 LLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGV--ESQKVVDITTVDGCQ 684
+ L K + IISPY+ QV + Q++ + + ESQ + ++TVDG Q
Sbjct: 674 SQIIASLFEETKARKEKVSVGIISPYKAQVHEIQKKLGKAYSTDAESQFSIKVSTVDGFQ 733
Query: 685 GREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKH--WNNL 742
G E+DV I S VR + IGF+ +YRR NV +TRA+ + + G A TL ED H W +
Sbjct: 734 GDEEDVIIISTVRCNSGGHIGFVKNYRRANVSLTRARHCLWITGNAKTL-EDSHSVWEKV 792
Query: 743 VKSAEKQDCLF 753
V+ A+ Q C +
Sbjct: 793 VQHAKGQRCFY 803
>gi|328851436|gb|EGG00591.1| hypothetical protein MELLADRAFT_118002 [Melampsora larici-populina
98AG31]
Length = 1001
Score = 175 bits (443), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 122/324 (37%), Positives = 165/324 (50%), Gaps = 33/324 (10%)
Query: 458 ILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDP 517
I+ + +VC T +G++ L + F VIIDEAA EP LVPL G LVGD
Sbjct: 675 IIASSDVVCCTCLGAGASGLEAVE--FASVIIDEAAMCHEPTALVPLTKGSAHAVLVGDH 732
Query: 518 VQLPATVISPVAEHLGYGTSLFKRLQ-RAGYPVKMLKTQYRMHPEVRSFPSREFYDEALE 576
QLPA +SP AE G+G SLF+R+Q + +L QYRM+P + +FP+ EFYD AL
Sbjct: 733 KQLPAITLSPAAEAHGFGISLFERIQSQQSVQSILLHKQYRMNPIISAFPNAEFYDHALV 792
Query: 577 DGSDVEDYTTRDWHEYRCFGPFS-----FFDIHEGKESQPAGSGSWINIDEVDFVLLLFH 631
D + +H R GP F H E++ + N E + VL +
Sbjct: 793 DSIKPDSIKPVYFHFDRSLGPEQKSRAVSFVTHNHLETK--IEKTLTNQTEAEIVLGILR 850
Query: 632 KLISMYPQLKSSSQLAIISPYRHQVKQFQ----ERFKETFGVESQKV----VDITTVDGC 683
L+ P+L S + II+PYR QV Q + K + S++ V+I TVDG
Sbjct: 851 DLLRTNPEL-SGRDIGIIAPYRGQVSLLQSLQRQPQKASLIRNSEQSYRNEVEINTVDGF 909
Query: 684 QGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTL---REDKH-- 738
QGREK V I SCVR + ++ IGFLAD RR NV TRAK +VVG TL R ++H
Sbjct: 910 QGREKPVIILSCVRGNFERQIGFLADLRRFNVAATRAKQKFIVVGHLDTLQYARVNRHFK 969
Query: 739 ---------WNNLVKSAEKQDCLF 753
W V+ A+ ++ L
Sbjct: 970 FGGHYNAEAWRRWVQWAKSENLLI 993
>gi|149193893|ref|ZP_01870991.1| DNA helicase, UvrD/REP family protein [Caminibacter mediatlanticus
TB-2]
gi|149135846|gb|EDM24324.1| DNA helicase, UvrD/REP family protein [Caminibacter mediatlanticus
TB-2]
Length = 641
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 119/307 (38%), Positives = 175/307 (57%), Gaps = 24/307 (7%)
Query: 452 DSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQV 511
+ I ILN A IV +T S +GS L + FDVV +DEAAQ++EP+TL+PL KQ
Sbjct: 344 EEIMKEILNSADIVFATNSGAGSEFLEE--RKFDVVFLDEAAQSMEPSTLIPLIK-AKQS 400
Query: 512 FLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVK--MLKTQYRMHPEVRSFPSRE 569
GD QLP T++S E L S+F+R + YP+ L+ QYRM+ ++ +FPS E
Sbjct: 401 IFAGDDKQLPPTILSN-DERLK--VSMFERFHKI-YPIASHTLEVQYRMNEKINNFPSCE 456
Query: 570 FYDEALEDGSDVEDYTTRDW--HEYRCFG---PFSFFDIHEGK--ESQPAGSGSWINIDE 622
FY+ ++ +++ T +D +E FG P FFD GK E S S N E
Sbjct: 457 FYECKVKTYEKIKNITLKDLGVNEDESFGGYTPIVFFDTR-GKFLEETKKDSPSKYNPKE 515
Query: 623 VDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDG 682
+FVL L KLI + + +I+PY K +E K+ E + ++I +VDG
Sbjct: 516 AEFVLSLCKKLIENNAK---QEFIGVITPY----KDHEEYIKKLMENEKIEGIEIKSVDG 568
Query: 683 CQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNL 742
QGREK++ I S VRA++K++IGFL D RR+NV ITR K +++VG A TL ++ + +L
Sbjct: 569 FQGREKEIIIVSLVRANEKENIGFLDDIRRLNVAITRPKRKLIIVGDAKTLSTNQTYQHL 628
Query: 743 VKSAEKQ 749
+ +K+
Sbjct: 629 IDYVKKE 635
>gi|156096759|ref|XP_001614413.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148803287|gb|EDL44686.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 1756
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 145/506 (28%), Positives = 226/506 (44%), Gaps = 134/506 (26%)
Query: 375 RVLVCAPSNSALDEIVLRLLN--TGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQ 432
R+LVCAPSN+A+DEI+ RL++ +GI DEN + P + RIG +V++ ++ +E
Sbjct: 915 RILVCAPSNAAIDEILRRLISPGSGILDENGNFFNPIVTRIG----RNVSTDILEFSLEF 970
Query: 433 KRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEA 492
K +++ I+ +L + I+CSTLS S +A L FD +IIDEA
Sbjct: 971 KEQLFL-----FLNKKEENKIIKKNLLKTSTIICSTLSASSNASLVNYIDTFDAIIIDEA 1025
Query: 493 AQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVK-- 550
+Q+VE L+PL+ CK++ LVGDP QL ATV S A+ Y SLF+RLQR K
Sbjct: 1026 SQSVELDILIPLSFSCKKIILVGDPKQLSATVFSLFAKRRKYARSLFERLQRKHKMNKCK 1085
Query: 551 --MLKTQYRMHPEVRSFPSREFYDEALEDGS----------DVEDYTT------------ 586
+L QYRMHP++ FP++ +Y + D + +Y T
Sbjct: 1086 YNLLSIQYRMHPDISHFPNKYYYRNKITDAPYFLFTLFKEMKMNEYLTKLRSDPGGPHNG 1145
Query: 587 ----RD-WHEYRCFG----------PFSFFDIHEGKESQPA------------------- 612
RD +H++ F P +F DIH +++Q A
Sbjct: 1146 AIIQRDLFHKFDLFHFMQSNFGNLLPPNFHDIHLCQKNQGAIDWFIIPFLRHSVFYDISF 1205
Query: 613 -----GSGSWINIDEVDFVLL---LFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFK 664
S+INI+E + VL H + + + ++ II+PY + ++ K
Sbjct: 1206 SKQRKIKNSYINIEESEAVLQFIEFLHFIFTTENVNEWYKRIGIITPYATEKFFLKKELK 1265
Query: 665 ETFGVESQK-----VVDITTVDGCQGREKDVAIFSCVR---------------------- 697
F + K +DI TVDG QG EKD+ IF CVR
Sbjct: 1266 MFFTKKGYKNNISNFIDIGTVDGFQGTEKDIIIFVCVRTKGSLMRKKKRKKKREKDNAAG 1325
Query: 698 ----------------------ASDKK------SIGFLADYRRMNVGITRAKSSILVVGC 729
A D+ S F + Y+R+NV +TRAK ++ + G
Sbjct: 1326 SDTTDQEENIPNVSSASSGEDAAEDRADDEVDDSNMFFSSYKRLNVALTRAKYNLFIFGN 1385
Query: 730 ASTLREDKHWNNLVKSAEKQDCLFRV 755
S L++ W ++K + ++ + ++
Sbjct: 1386 CSFLKKCDAWGKIIKHYKMRNKIIKI 1411
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 39/73 (53%), Gaps = 6/73 (8%)
Query: 245 IPGLLHEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARV 304
IP L +N QL AI+ ++ LIQGPPGTGKT TILG++SA++
Sbjct: 616 IPEALKNKFLNIYNEYQLRAINNSIMNDGITLIQGPPGTGKTTTILGIISALI------F 669
Query: 305 HSKGGLREIKRGP 317
+G L +R P
Sbjct: 670 FQQGELNRSRRSP 682
Score = 47.0 bits (110), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 59/117 (50%), Gaps = 7/117 (5%)
Query: 17 FCKIILGWDYFRLVKESQERND---KNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLF 73
IIL W+Y+ ++ +E + KN KVD + + + D Y++ ++Y ++ PL
Sbjct: 81 LVNIILRWNYYTSLRSEKELDSNGVKNRLKVD---VKIYTLPDVYRNFEEYFYSYFPLFL 137
Query: 74 EEVKAQIIQKKDEEEVQEWKLRLVMECGEADGFHLP-SVTYEADEVESISPNDLLLL 129
E + I KK+ E ++E+ + LV E F ++ Y++ ++ DL+LL
Sbjct: 138 IETQQLINNKKENENIKEYDVTLVNPPKEIYNFEFSMNIAYDSFVYANLFYGDLILL 194
>gi|145353588|ref|XP_001421091.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581327|gb|ABO99384.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 466
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 131/408 (32%), Positives = 199/408 (48%), Gaps = 45/408 (11%)
Query: 376 VLVCAPSNSALDEIVLRLLNTGIRDEN--IRSYTPKIVRIGL--KAHHSVNSVAIDHLV- 430
VL A SN A+D I+ G+ E+ + ++VR+G K + + +D +
Sbjct: 64 VLASAASNVAVDNIL-----EGLAKESFIVDGRPLRVVRVGAPAKVQPWLQQLTLDAQIA 118
Query: 431 ------------EQKRDDS--AADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSAL 476
E R S A +Q+ AT+ + + +S IL +VC+T +G L
Sbjct: 119 LHPLGRQAAAMREAIRGQSGPAFARQRKQATQLELTAAKS-ILKSVDVVCTTCVGAGDEL 177
Query: 477 LSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGT 536
L F V ++DEA Q EP L+ L V LVGD QLP TV+S A G
Sbjct: 178 LEDFT--FPVAVVDEATQCTEPGALISLTKALSAV-LVGDSKQLPPTVVSRDAVDAGLQV 234
Query: 537 SLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRD---WHEYR 593
S+F+R++R G V +L QYRMHP++ FPS FY + +D W
Sbjct: 235 SIFERMERLGVKVSLLDMQYRMHPQIAEFPSLAFYKGKVGSVPTPQDRPLVPGIAWPSPN 294
Query: 594 CFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYR 653
P +F +I + P G+ S N+ E + + KL++ L + +ISPY
Sbjct: 295 V--PVAFVEISAPESRAPDGN-SLYNVGEAKMAIGVVRKLLAAG-DLAGPGDIGVISPYA 350
Query: 654 HQVKQFQERF------KETF--GVESQKV--VDITTVDGCQGREKDVAIFSCVRASDKKS 703
QV++ QE + K + E K+ ++I +VDG QGREK+V + VR++
Sbjct: 351 AQVRRLQEEYGVGGSPKRNYLDYTEEDKIEELEIRSVDGFQGREKEVIVLCTVRSNPSGD 410
Query: 704 IGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDC 751
IGF+AD RR+NVGITRAK ++V+G TL ++ W + K ++Q+C
Sbjct: 411 IGFVADPRRLNVGITRAKRGLIVLGNRKTLSNNEMWRSWFKWIDEQNC 458
>gi|301609475|ref|XP_002934297.1| PREDICTED: uncharacterized protein FLJ44066-like [Xenopus
(Silurana) tropicalis]
Length = 789
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 119/386 (30%), Positives = 203/386 (52%), Gaps = 26/386 (6%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTG----IRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLV 430
++L+ + +N A+D ++L LL+ G +R +IR I+ L A + I L+
Sbjct: 376 KILISSSTNVAVDRVLLGLLDLGFSQFVRVGSIRKIAKPILPFSLHAGSENENEQIKELL 435
Query: 431 EQKRDDSAADKQKH--GATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVI 488
+DD ++ + + + + A+L + +V +T + A +S L F VV+
Sbjct: 436 ALLKDDLTPVEKAYVRKSIEQHKLGTNKALLGQVRVVGATCAACPFACMSNLK--FPVVV 493
Query: 489 IDEAAQAVEPATLVPLAT-GCKQVFLVGDPVQLPATVI-SPVAEHLGYGTSLFKRLQRAG 546
+DE +Q EPA+++P+A C+++ LVGDP QL T+ S A G +LF RL G
Sbjct: 494 LDECSQMTEPASMLPVARFQCEKLILVGDPKQLSPTIQGSEPAHEKGLEQTLFSRLCLMG 553
Query: 547 YPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYT-TRDWHEYRCFGPFSFFDIHE 605
+ +L+TQYR HP + S + FYD L +G ED DW CF ++++
Sbjct: 554 HKAIILRTQYRCHPAICSIANELFYDSHLINGVSEEDRKPLLDWLPTLCF-----YNVN- 607
Query: 606 GKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKE 665
G E Q G+ S+ N++E +F + L LI+ + S + +I+ Y+ Q+ +
Sbjct: 608 GTE-QVEGNNSFYNMEEANFTVKLIQSLIASGIE---GSMIGVITLYKSQMYKIFSLLAS 663
Query: 666 TFGVESQ--KVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSS 723
+ +S K V ++TVD QG EK++ I SCVR + +GF+ +RMNVG+TR K
Sbjct: 664 SAHCDSTDIKAVQVSTVDAFQGAEKEIIILSCVRT---RQVGFIDSEKRMNVGLTRGKRH 720
Query: 724 ILVVGCASTLREDKHWNNLVKSAEKQ 749
+L++ + LR++K W +++ E+Q
Sbjct: 721 LLIIANLACLRKNKLWEHVIHHCERQ 746
>gi|333038075|gb|AEF13567.1| hypothetical protein PICST_73544 [Scheffersomyces stipitis CBS
6054]
Length = 1021
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 128/402 (31%), Positives = 201/402 (50%), Gaps = 42/402 (10%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIG---LKAHHSVNSVAIDHLVE 431
++LVCAPSN A+D + +L + G++ + + + + V L H+ VN A L +
Sbjct: 480 KILVCAPSNVAVDHLAEKLDSLGLKVLRLTARSREDVESSVSHLSLHNLVNRTAKGELKK 539
Query: 432 QKRDDSAADKQKHGATRKDRDSIR---SAILNEAVIVCSTLSFSGSALLSKLNHGFDVVI 488
R + + ++ IR S IL + +VC T + LS + F V+
Sbjct: 540 LLRLRNELGELSLSDSKSLIRLIRTSESKILAQCDVVCCTCVGAADRRLSNIK--FRTVL 597
Query: 489 IDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYP 548
IDE+ QA EP L+P+ G KQV LVGD QL ++ A G SLF+RL G+
Sbjct: 598 IDESTQASEPEVLIPIVKGAKQVILVGDHQQLGPVILDKKAGDAGLRQSLFERLVILGHV 657
Query: 549 VKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVE----DYTTRDWHEYRCFGPFSFFDIH 604
L+ QYRM+P + FPS FY+ +L++G + +T W Y P F+ +
Sbjct: 658 PIRLEVQYRMNPCLSEFPSNIFYEGSLQNGVTSAQRRIESSTFPWPVYD--SPMMFW-AN 714
Query: 605 EGKESQPAGSGSWINIDEVDFVLLLFHKLIS-MYPQLKSSSQLAIISPYRHQ-------- 655
G+E S++N E + K+I+ ++ + Q+ +I+PY Q
Sbjct: 715 YGREEISGSGNSYLNRVEA----MNVEKIITRLFKDGVKAEQIGVITPYEGQRAYLVSYM 770
Query: 656 -----VKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADY 710
+ +F+E++ E V++T+VD QGREKD I SCVRA+ IGFL+D
Sbjct: 771 SINSTLAEFKEQYLE---------VEVTSVDAFQGREKDYIILSCVRANSSHQIGFLSDP 821
Query: 711 RRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
RR+NV +TRAK ++V+G L ++ WN L+ ++ CL
Sbjct: 822 RRLNVALTRAKYGLVVLGNPRALCRNRLWNQLLIHFREKGCL 863
>gi|401881567|gb|EJT45865.1| hypothetical protein A1Q1_05671 [Trichosporon asahii var. asahii
CBS 2479]
Length = 1018
Score = 174 bits (442), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 129/409 (31%), Positives = 206/409 (50%), Gaps = 64/409 (15%)
Query: 376 VLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAH----------------- 418
VLVCA +N A+D +V L G+ +R +P V ++AH
Sbjct: 582 VLVCAHTNVAVDNLVEGLKTQGV--NAVRFGSPDRVSPRVEAHTLEARIEQHPAYPVLNR 639
Query: 419 -----HSVNSVAIDHLVEQKRDDSAADKQK-HGATRKDRDSIRSAILNEAVIVCSTLSFS 472
S+ + ++L +R+ + K +G + +++ +L+EA +VC+T +
Sbjct: 640 ARNSKESLQAELSENLAGPQREAKQKEIGKLNGRIYLLKRLLQAEVLHEADVVCTTCLSA 699
Query: 473 GSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHL 532
S +L ++ F V +DEA+ A EP ++VPL G QV ++GD QLP ++S A+
Sbjct: 700 TSRVLEVID--FPFVFLDEASMATEPLSIVPLTKGSAQVAIIGDHKQLPPVIVSEAAQQG 757
Query: 533 GYGTSLFKRL-QRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHE 591
G GTSLF+RL P ML TQYRMHP + +F S FY+ L DG+ V+ H
Sbjct: 758 GLGTSLFERLIHEQAVPSIMLDTQYRMHPSIAAFSSEAFYNGQLRDGTVVDGQVDPVLHP 817
Query: 592 YRCFGPFSFFDIHEGKESQPAGSGSWINID--------------EVDFVLLLFHKLISMY 637
P + F + +G S+ S +++N D E V + L++
Sbjct: 818 -----PTTAFLLPDGDSSK---SLTFLNHDFPESPQNRSIANHHEAGRVCDIVADLLASN 869
Query: 638 PQLKSSSQLAIISPYRHQVK----------QFQERFKETFGVESQKVVD---ITTVDGCQ 684
P LK + + +I+PY Q++ + Q F++ G E + ++ I TVDG +
Sbjct: 870 PDLKGAD-IGVIAPYSAQIRLITEFLTIDERRQRAFRQWLGPERAREIEDIEIRTVDGFE 928
Query: 685 GREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTL 733
GREK V IFS VR++ +GFL D+RR+NVG+TRAK +++++G TL
Sbjct: 929 GREKSVIIFSTVRSNTGGFLGFLGDWRRLNVGLTRAKRALIMLGSLRTL 977
>gi|393235485|gb|EJD43040.1| P-loop containing nucleoside triphosphate hydrolase protein
[Auricularia delicata TFB-10046 SS5]
Length = 887
Score = 174 bits (442), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 137/425 (32%), Positives = 204/425 (48%), Gaps = 50/425 (11%)
Query: 376 VLVCAPSNSALDEIVLRLLNTGIRDENIRS----------YTPKIVRIG--LKAHHSVNS 423
+LVC +N A+D +V L G+R S YT + R L H
Sbjct: 466 ILVCTYTNIAVDNLVEGLGKAGLRPLRFGSSGTAPAGGAQYTLRARRDAHVLGPHLDKLL 525
Query: 424 VAIDHLVEQKRDDSAADKQKHGA-TRKDRD--SIRSA-----------ILNEAVIVCSTL 469
I+ L R AA+ A R++++ +R A I+ ++ +VC+T
Sbjct: 526 GRIERLNRDLRGLRAAEPPNPAAIARREKEVLGLRGAVFKLERLLMQEIVEDSDVVCTTC 585
Query: 470 SFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVA 529
+GSA L + F +V +DEA+ + EPA+L+PL GC+ V L+GD QLP + S A
Sbjct: 586 ISAGSAALHVAD--FPIVFLDEASMSTEPASLIPLMRGCEHVALIGDHKQLPPVITSDEA 643
Query: 530 EHLGYGTSLFKRLQRAG-YPVKMLKTQYRMHPEVRSFPSREFYDEALEDGS-----DVED 583
E G G SLF+RL G P ML QYRMHP++ FP+ EFY +L DG+ +V
Sbjct: 644 ERGGLGRSLFERLTEEGEVPSIMLDVQYRMHPDLSRFPASEFYGRSLLDGTVSAHGEVAP 703
Query: 584 YTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSS 643
+ G F H E++ S +N+ E V + L+ L
Sbjct: 704 ALRPPASRFLQRGAGVVFLDHRHGEAR--RDRSRVNVGEARLVCDVVEDLLLQNEDL-VG 760
Query: 644 SQLAIISPYRHQVKQFQ-------ERFKETFGVESQ----KVVDITTVDGCQGREKDVAI 692
++ +I+PY Q+ + ER+ + G E + + +++ TVDG +GREK+V I
Sbjct: 761 REIGVIAPYAAQISLLERVLGENRERWVDALGSERRADEVEAIEVKTVDGFEGREKEVII 820
Query: 693 FSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKH--WNNLVKSAEKQD 750
FS VR + IGFLAD RR+NVG+TRAK + V G TL +K W V+ +
Sbjct: 821 FSTVRNNGAGQIGFLADRRRLNVGLTRAKRGLFVAGSVRTLGTEKSGVWARYVEYLRARS 880
Query: 751 CLFRV 755
+ R+
Sbjct: 881 LVVRL 885
>gi|392587391|gb|EIW76725.1| P-loop containing nucleoside triphosphate hydrolase protein
[Coniophora puteana RWD-64-598 SS2]
Length = 1113
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 118/343 (34%), Positives = 177/343 (51%), Gaps = 38/343 (11%)
Query: 429 LVEQKRDDSAADKQKHGATRKDRDSIRSAILN----EAVIVCSTLSFSGSALLSKLNHGF 484
++E R+ +++ G R + + +L +A ++C+T S ++ LS ++ F
Sbjct: 725 IIENLRNALVVSERRLGIVRGKLHVLHNDMLRDITAQADVICTTCISSVNSALSVID--F 782
Query: 485 DVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQR 544
VV +DEA+ + EPA+L+PL G + V L+GD QLP ++S A+ G G SLF+RL
Sbjct: 783 PVVFLDEASMSTEPASLIPLMRGSQHVALIGDHKQLPPVIVSYEADLKGLGISLFERLTE 842
Query: 545 AGY-PVKMLKTQYRMHPEVRSFPSREFYDEALEDGS-------------DVEDYTTRDWH 590
G P ML QYRMHP + FPS EFY+ +L+DG+ + + D
Sbjct: 843 EGVVPSIMLDVQYRMHPALSYFPSLEFYNLSLQDGTVDSGGNVSPLLLPPLSAHLPVD-- 900
Query: 591 EYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIIS 650
E P F H G E+ S +N DE + V + L+ ++ + II+
Sbjct: 901 ESTGNRPSIVFMDHAGSET--LKDRSRVNYDEANIVCSIIEDLLLRNEHMRGD-DIGIIA 957
Query: 651 PYRHQVK----------QFQERFKETFG---VESQKVVDITTVDGCQGREKDVAIFSCVR 697
PY Q+ ++ RF T G V V++ TVDG +GR+KDV IFS VR
Sbjct: 958 PYAAQISLLTRLLNTDAKYARRFAATLGDRRVRELSKVEVRTVDGFEGRQKDVIIFSTVR 1017
Query: 698 ASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWN 740
+ +GFLAD RR+NVG+TRAK + VVG STL++ K +
Sbjct: 1018 NNPAGHVGFLADRRRLNVGLTRAKRGLFVVGSISTLKQSKSFT 1060
>gi|19113992|ref|NP_593080.1| ATP-dependent RNA helicase Upf1 [Schizosaccharomyces pombe 972h-]
gi|19924241|sp|Q09820.2|RENT1_SCHPO RecName: Full=ATP-dependent helicase upf1; AltName:
Full=Nonsense-mediated mRNA decay protein upf1; AltName:
Full=Regulator of nonsense transcripts 1 homolog;
AltName: Full=Up-frameshift suppressor 1
gi|4894186|emb|CAA91194.2| ATP-dependent RNA helicase Upf1 [Schizosaccharomyces pombe]
Length = 925
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 122/398 (30%), Positives = 192/398 (48%), Gaps = 43/398 (10%)
Query: 370 RRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVA---- 425
R+ VLVCAPSN A+D++ ++ TG+R +VR+ K+ + S
Sbjct: 439 RKSHSPVLVCAPSNVAVDQLAEKIHRTGLR----------VVRVAAKSREDIESSVSFLS 488
Query: 426 -------------IDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFS 472
+ L++ + +++ Q R + +L A ++C T +
Sbjct: 489 LHEQIKNYKFNPELQRLLKLRSENNELSIQDEKKLRILVAAAEKELLRAAHVICCTCVGA 548
Query: 473 GSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHL 532
G +SK + F V+IDEA QA EP ++PL G KQV LVGD QL V++
Sbjct: 549 GDRRISK--YKFRSVLIDEATQASEPECMIPLVLGAKQVVLVGDHQQLGPVVMNKKVALA 606
Query: 533 GYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR--DWH 590
SLF+RL G L QYRMHP + FPS FY+ L++G + R D+
Sbjct: 607 SLSQSLFERLIILGNSPFRLVVQYRMHPCLSEFPSNTFYEGTLQNGVTTSERIARHVDFP 666
Query: 591 EYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSS---SQLA 647
+ P F+ + G+E A S++N E K+++ + L+S+ Q+
Sbjct: 667 WIQPDSPLMFY-ANFGQEELSASGTSFLNRTEASTC----EKIVTTF--LRSNVLPEQIG 719
Query: 648 IISPYRHQVKQFQERFKETFGVESQ--KVVDITTVDGCQGREKDVAIFSCVRASDKKSIG 705
I++PY Q + + ++ K V++ +VD QGREKD I SCVR+S+ + IG
Sbjct: 720 IVTPYDGQRSYIVQYMQNNGSMQKDLYKAVEVASVDAFQGREKDFIILSCVRSSEHQGIG 779
Query: 706 FLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLV 743
F+ D RR+NV +TRAK ++V+G L + W + V
Sbjct: 780 FVNDPRRLNVALTRAKYGVIVLGNPKVLAKHALWYHFV 817
>gi|307173791|gb|EFN64578.1| Helicase sen1 [Camponotus floridanus]
Length = 1634
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 145/485 (29%), Positives = 222/485 (45%), Gaps = 123/485 (25%)
Query: 369 SRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPK----IVRIG-LKAHH---- 419
+ R +R+L+CAPSN+A+DEIVLRLLN +RS K +VRIG +++ H
Sbjct: 1176 TNRKTLRILICAPSNAAIDEIVLRLLN-------VRSKLKKNRFNMVRIGRMESMHLMAK 1228
Query: 420 --SVNSVAIDHLVE-------------------------------QKRDDSAADKQKHGA 446
SV + HL + Q++D+ DK+K
Sbjct: 1229 PISVTELGKRHLTKISQEAVYSDNTEELAILEAKINSLKAELSSLQQKDE---DKKKEIR 1285
Query: 447 TR----------------------KDRDSIR----SAILNEAVIVCSTLSFSGSALLSKL 480
R KDR + + IL A I+ TLS + + +
Sbjct: 1286 RRLMETLMRYELVKCGKPINEFSSKDRTKYQRMAENIILTGADIIACTLSSCYTNQMESI 1345
Query: 481 NHGF----DVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGT 536
G+ V I+DEA Q+ E TL+PL G K + LVGDP QLPATV+S A+ L
Sbjct: 1346 FGGYKERISVCIVDEATQSCEAETLIPLMLGVKTLVLVGDPNQLPATVLSQRAKKLKLDQ 1405
Query: 537 SLFKRLQ-----RAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHE 591
S+F R+Q + P+ ML QYRM + +P++ FYD L++ D
Sbjct: 1406 SVFSRIQNVFTSQQNNPIIMLNMQYRMDYAISYWPNKYFYDGKLKNSID----------- 1454
Query: 592 YRCFGPFSFFDI--HEGKESQPAGSGSWINIDEVDFV------LLLFHKLISMYPQLKSS 643
+R PF + I H K+++ S + E +F+ +L F ++ P
Sbjct: 1455 FRMKFPFHSYRILDHNFKQNEDKFSNTI----EAEFIAKTILAMLTFTNWENVNP----- 1505
Query: 644 SQLAIISPYRHQVKQFQERFKETF-----GVESQKVVDITTVDGCQGREKDVAIFSCVRA 698
L +++PY +Q + E + ++ ++ TVD QG+E+D+ I SCVR+
Sbjct: 1506 ISLGVLTPYNNQRTLVLNKINEKISSIPDNLRNKISFEVNTVDSFQGQERDIIIMSCVRS 1565
Query: 699 SDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRVSKP 758
IGFL+D +R+ V +TRAK S+++ G +T +DK WN L+ A+ + L RV
Sbjct: 1566 H---GIGFLSDRQRLCVALTRAKYSLILCGNFNTFLKDKMWNALLSDAKSRGVLCRVDAH 1622
Query: 759 YASFF 763
A F
Sbjct: 1623 AAPVF 1627
Score = 47.4 bits (111), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 52/96 (54%), Gaps = 10/96 (10%)
Query: 211 REYLALRSVGSLPFKDLILSAS--EKSSGSQDQSWKIPGLLHEYIKENHNASQLEAIHE- 267
R AL+ + P +LIL+ E D+ + L+ ++N N Q+EA+++
Sbjct: 1081 RMVQALQYLPQSPISNLILNPKIEEYQLPPMDEQFTCSSLV---TRDNLNPKQMEAVYKV 1137
Query: 268 --GLLRK--AFVLIQGPPGTGKTQTILGLLSAILHA 299
+L+K IQGPPGTGK++ I+ L+S IL++
Sbjct: 1138 TKTVLKKENKLCFIQGPPGTGKSKVIVNLVSQILYS 1173
>gi|302829609|ref|XP_002946371.1| hypothetical protein VOLCADRAFT_86581 [Volvox carteri f.
nagariensis]
gi|300268117|gb|EFJ52298.1| hypothetical protein VOLCADRAFT_86581 [Volvox carteri f.
nagariensis]
Length = 1135
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 130/431 (30%), Positives = 202/431 (46%), Gaps = 71/431 (16%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLV---- 430
+VLV APSN A+D++ ++ TG+ K+VR+ K +V S ++HL
Sbjct: 564 QVLVAAPSNVAVDQLAHKMDQTGL----------KVVRLCAKTREAVAS-PVEHLTLHYQ 612
Query: 431 ---------EQKRDDSAADKQKHGATRKDRDSIRS-------AILNEAVIVCSTLSFSGS 474
E+ R A + G D ++S +L A +VC+T +G
Sbjct: 613 VTHMAVPEGERLRKLLALRGAQGGLNASDEKELKSLRRRLEMEVLENADVVCTTCVGAGD 672
Query: 475 ALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQ------------------------ 510
L+ N F V+IDE+ QA EP L+P+ G KQ
Sbjct: 673 PRLA--NFRFQHVLIDESTQAAEPECLIPMVLGAKQLPHAAQWVFLLLASPHVHRWRTSM 730
Query: 511 ----VFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFP 566
V LVGD QL ++ A G SLF+RL+ G L+ QYRMHP + FP
Sbjct: 731 LTAKVILVGDHCQLGPVIMCKKAAEAGLCQSLFERLRLLGVKPIRLQVQYRMHPCLSEFP 790
Query: 567 SREFYDEALEDGSDVED--YTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVD 624
S FY+ L++G+ + + D+ + P F+ + G E A S++N E
Sbjct: 791 SNTFYEGTLQNGTGMGERRLVGVDFPWHNPDKPMMFW-VQLGAEEISASGTSYLNRTEAA 849
Query: 625 FVLLLFHKLISMYPQ-LKSSSQLAIISPYRHQVKQFQERFKETFGVESQ--KVVDITTVD 681
V K+++ + Q S SQ+ +I+PY Q V K +++++VD
Sbjct: 850 AV----EKVVTRFLQNGMSPSQIGVITPYEGQRAHVVSVMVRNGAVRQDLYKEIEVSSVD 905
Query: 682 GCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNN 741
QGREKD+ + SCVR+++ SIGFL+D RR+NV +TRA+ ++V+G L WN+
Sbjct: 906 AFQGREKDIIVLSCVRSNEHSSIGFLSDPRRLNVALTRARYGLVVLGNPRVLSRQPLWNS 965
Query: 742 LVKSAEKQDCL 752
L++ ++ CL
Sbjct: 966 LLQYFKESGCL 976
>gi|255555527|ref|XP_002518800.1| conserved hypothetical protein [Ricinus communis]
gi|223542181|gb|EEF43725.1| conserved hypothetical protein [Ricinus communis]
Length = 2820
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 97/278 (34%), Positives = 154/278 (55%), Gaps = 9/278 (3%)
Query: 484 FDVVIIDEAAQAVEPATLVPLA-TGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRL 542
D+++IDEAAQ E + +PL G + L+GD QLPA V S V+ G+G SLF+RL
Sbjct: 590 LDLLVIDEAAQLKECESAIPLQIAGIRHAILIGDECQLPAMVESVVSGEAGFGRSLFERL 649
Query: 543 QRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRC----FGPF 598
G+ +L QYRMHP + FP+ FY + D S+V+ + + ++ FGP+
Sbjct: 650 STLGHSKHLLDMQYRMHPFISRFPNSRFYFNQILDASNVK---CKVYEKHPLPGPMFGPY 706
Query: 599 SFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQ 658
SF ++ +G+E SW N+ EV VL + +L + + + +ISPY QV
Sbjct: 707 SFINVFDGREEMDNIGHSWKNMVEVAIVLKIVRRLHKAWNGSNKNLTIGVISPYAAQVNA 766
Query: 659 FQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGIT 718
+++ + + V + +VDG QG E+D+ I S VRA+ ++GFL++ +R+NV +T
Sbjct: 767 IRDKLNKKYEDIYGFSVKVRSVDGFQGGEEDIIILSTVRANSGGAVGFLSNPQRINVALT 826
Query: 719 RAKSSILVVGCASTL-REDKHWNNLVKSAEKQDCLFRV 755
RA+ + ++G TL D W LV A+++ C F V
Sbjct: 827 RARHCLWILGNERTLINSDSIWKELVFDAKQRQCFFNV 864
>gi|224009021|ref|XP_002293469.1| hypothetical protein THAPSDRAFT_264090 [Thalassiosira pseudonana
CCMP1335]
gi|220970869|gb|EED89205.1| hypothetical protein THAPSDRAFT_264090 [Thalassiosira pseudonana
CCMP1335]
Length = 349
Score = 174 bits (440), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 118/340 (34%), Positives = 174/340 (51%), Gaps = 29/340 (8%)
Query: 451 RDSIRSAILNEAVIVCSTLSFSGSALL-------SKLNHGFDVVIIDEAAQAVEPATLVP 503
R R IL+ +V +TLS +GS SK++ F VI+DEA QA EP +L+P
Sbjct: 1 RSKARLDILSSCNVVVTTLSGAGSKAFIEACNRDSKVDQEFSAVILDEACQASEPESLIP 60
Query: 504 LATGCKQVFLVGDPVQLPATVIS-PVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEV 562
V LVGDP QLP IS P ++ + SLF+RLQ +PV +L+ QYRMH +
Sbjct: 61 FKFNPTTVTLVGDPQQLPVLTISGPSTQNCLFERSLFERLQSLNWPVTLLREQYRMHQRI 120
Query: 563 RSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDE 622
FPS+EFY L V++ + W CF +F+D S G + N +E
Sbjct: 121 AEFPSKEFYQGKLITPDSVKNRSV-SWTSNPCFPTIAFWDTDGKLMSGSGGGFGYSNQEE 179
Query: 623 VDFVLLLFHKLISMYPQLKSSS---QLAIISPYRHQVKQFQERFKETFGV--------ES 671
V+F+ L + Y L+++ + IIS Y+ QV F + +S
Sbjct: 180 VEFITRDILSLFT-YEYLRNTDVKVSIGIISFYKEQVSIILLLFAGIYWTLASVTALDQS 238
Query: 672 QKVVDITTVDGCQGREKDVAIFSCVRA-------SDKKSIGFLADYRRMNVGITRAKSSI 724
+ + + TVDG QG E D+ I SCVR+ + + ++GFL DYRR+NV +TRAK S+
Sbjct: 239 RISIKVATVDGFQGSECDIIILSCVRSHSNRGGGNGRNNVGFLNDYRRVNVALTRAKCSL 298
Query: 725 LVVGCASTLREDKHWNNLVKSAEKQDCLFRVSKPYASFFS 764
+VG + L+ W+ L++ E + L R S + S F+
Sbjct: 299 WIVGNSEVLKSSNLWSKLIQHMEGEKALQR-SSDFRSMFA 337
>gi|449463400|ref|XP_004149422.1| PREDICTED: uncharacterized protein LOC101220392 [Cucumis sativus]
Length = 877
Score = 173 bits (439), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 105/281 (37%), Positives = 156/281 (55%), Gaps = 8/281 (2%)
Query: 484 FDVVIIDEAAQAVEPATLVPLA-TGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRL 542
+ ++IDEAAQ E +PL K L+GD QLPA V S +A+ G+G SLF+RL
Sbjct: 522 LETLVIDEAAQLKECEAAIPLQFPSIKHAILIGDECQLPAMVESKIADEAGFGRSLFERL 581
Query: 543 QRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVED--YTTRDWHEYRCFGPFSF 600
G+ +L Q+RMHP + FP+ +FY + DG +V+ Y + H FG +SF
Sbjct: 582 SSLGHQKHLLNVQHRMHPSISYFPNSKFYANKILDGPNVKTKAYEKKFLHGPM-FGSYSF 640
Query: 601 FDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQ---LAIISPYRHQVK 657
DI+EGKE + + SW N+ EVD V + H L + S + + ++SPY QV+
Sbjct: 641 IDINEGKEEKDGITQSWKNMVEVDVVGKIIHNLYKASCVDRHSKEKISVGVVSPYLAQVE 700
Query: 658 QFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGI 717
+E + S V +++VDG QG EKD+ I S VR++ SIGFL+ +R NV +
Sbjct: 701 AIKENIGRDYSNCSSFSVKVSSVDGFQGGEKDIIIISTVRSNRSSSIGFLSSNQRTNVAL 760
Query: 718 TRAKSSILVVGCASTL-REDKHWNNLVKSAEKQDCLFRVSK 757
TRA+ + ++G +TL D W LV A K+ C F+ ++
Sbjct: 761 TRARYCLWILGNFTTLSNSDSIWGELVFDAMKRSCFFQANE 801
>gi|145343349|ref|XP_001416310.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576535|gb|ABO94603.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 315
Score = 173 bits (438), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 114/291 (39%), Positives = 162/291 (55%), Gaps = 25/291 (8%)
Query: 484 FDVVIIDEAAQAVEPATLVPLATGCKQ--VFLVGDPVQLPATVISPVAEHLGYGTSLFKR 541
FDVVIIDEA+QAVEPA L+PL + +VGD QL TVIS A+ YG SLF+R
Sbjct: 27 FDVVIIDEASQAVEPAALIPLQWIKPDGVIIMVGDSQQLAPTVISRSAQRAYYGYSLFER 86
Query: 542 LQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDV--EDYTTRDWHEYRCFGPFS 599
L G P L+ QYRMHP++ FPS FY L G+ ED WH + GP+
Sbjct: 87 LSDCGVPTFTLRDQYRMHPDIVKFPSERFYRGLLRSGAGALYEDRVA-PWHSFSNCGPYQ 145
Query: 600 FFDIHEGKESQ---PAGSGSWINIDEVDFVLLLFHKLISMYPQL-KSSSQLAIISPYRHQ 655
FF++ +G+ +Q G+ S+ N E +F + K I++ QL KS ++ II+PY Q
Sbjct: 146 FFNV-KGQMNQDRYETGARSFSNSAEAEFASYCYKK-IAVSAQLHKSEVKVGIITPYLDQ 203
Query: 656 VKQFQE----RFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRA---SDKKS----- 703
V++ ++ K+ + + V TVD QG+E D I SCVRA DK +
Sbjct: 204 VRRLRDFVEPLLKKDGALRTWAHVTYGTVDQVQGQEFDAVIISCVRAYPEGDKVAPDPPN 263
Query: 704 --IGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
IGFL D RR+NV +TR + S +VG A L+ + W +L+++A+ ++
Sbjct: 264 TDIGFLRDERRLNVALTRGRYSTWIVGYAEVLKREAVWLDLIENAKTRNVF 314
>gi|308807923|ref|XP_003081272.1| RNA helicase, putative (ISS) [Ostreococcus tauri]
gi|116059734|emb|CAL55441.1| RNA helicase, putative (ISS) [Ostreococcus tauri]
Length = 963
Score = 173 bits (438), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 126/420 (30%), Positives = 202/420 (48%), Gaps = 35/420 (8%)
Query: 355 PTTGNELKPE--VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTP---- 408
P TG + V + ++R +V+VCAPSN A+D + ++ TG++ I S +
Sbjct: 455 PGTGKTVTSATIVYHLAKRGNGQVIVCAPSNVAVDHLAEKIEKTGLKVVRISSRSREHLV 514
Query: 409 ----------KIVRIGLKAHHSVNSVAIDHLVEQKRDDSAADKQKHGATRK--DRDSIRS 456
++ IG H + + L + + S D++K+ +K +RD
Sbjct: 515 SSVEHLTLHYQVANIGGATHKAFQK--LQALKNECGELSPGDEKKYKNAQKKLERD---- 568
Query: 457 AILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGD 516
IL A ++C+T +G L+ F +V+IDE+ QA EP L+P+ G K V +VGD
Sbjct: 569 -ILENADVICTTAVGAGDPRLADFR--FRMVLIDESTQATEPECLIPIVMGAKHVVMVGD 625
Query: 517 PVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALE 576
QL V A G SLF+RL G L QYRMHP + FPS +FY+ L
Sbjct: 626 HRQLGPVVTCKQAHAAGLAQSLFERLIALGIKPIRLGVQYRMHPCLSDFPSNKFYEGVLS 685
Query: 577 DGSDVEDYTTR--DWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLI 634
+G D T D+ P F+ G+E A S++N E V L+
Sbjct: 686 NGVSASDRTLSHVDFPWPVPSKPMMFWS-QTGQEEMSASGTSFLNRAEAVAVEKCVTHLL 744
Query: 635 SMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQ--KVVDITTVDGCQGREKDVAI 692
+ S + +++PY Q + + Q K + + +VD QG+EKD I
Sbjct: 745 N---SGVSPEDIGVVTPYEGQRAYVVQHMTRVGVLHPQLYKDIQVASVDSFQGKEKDFII 801
Query: 693 FSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
+CVR+++K IGFL+D RR+NV ITRA+S ++++G L + +++++ ++ CL
Sbjct: 802 MTCVRSNEKSGIGFLSDPRRLNVAITRARSGLIIIGNPKVLNKQLLFHDMLTHFRQKKCL 861
>gi|328711753|ref|XP_001947351.2| PREDICTED: probable helicase senataxin-like [Acyrthosiphon pisum]
Length = 414
Score = 173 bits (438), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 123/412 (29%), Positives = 207/412 (50%), Gaps = 54/412 (13%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNS----VAIDHLV 430
++L+CAPSN A D IV R++ I+ + +VR+G + NS V +D ++
Sbjct: 13 KLLICAPSNEAADAIVRRIIE--IKKDLKHESQFNVVRVGSGQKYDPNSPIVDVMLDTVI 70
Query: 431 EQKRDDSAADKQKHGATRK-----DRDSIRSAILNEAVIVCSTL----------SFSGSA 475
+QK + + + + ++ + + IL ++ +TL +F +
Sbjct: 71 KQKMGNPLNEANRQCQSNNLFIYTNKKDLENEILINTEVIVTTLNSCFSKTMEETFKPTN 130
Query: 476 LLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYG 535
+ S N F I+DEA Q++EP VP+ G ++ LVGD QL V S VA+ G G
Sbjct: 131 IKSLNNCHFTACIVDEAGQSIEPLIFVPILLGIDKLILVGDDKQLQPLVKSKVAKDNGLG 190
Query: 536 TSLFKRLQ---------RAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTT 586
SLFKRL+ R +PV ML TQYRMH E+ FPS+ FY ++ V+
Sbjct: 191 ISLFKRLKTWFEQKRSTRKSFPVTMLNTQYRMHKEICLFPSKYFYKGEIKTAPSVKMRKQ 250
Query: 587 RDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQL 646
+H Y ES +G +NI E + ++ L L++ + S +
Sbjct: 251 LSFHPYMIL----------EHESLQDNTGE-VNIGEANMIVTLVDILLNSECR---SLTV 296
Query: 647 AIISPYRHQVKQFQERFKETFGVESQKV-VDITTVDGCQGREKDVAIFSCVRASDKKSIG 705
A+++PY Q +Q K+ +K+ +++ T+D QG E DV + S VR + +G
Sbjct: 297 AVLTPYHKQREQINILLKK------KKISLNVNTIDSFQGGECDVLLISTVRTN---GVG 347
Query: 706 FLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRVSK 757
F+ D R+NV +TRAK S+++ G +LR ++ W++L++ A+++ + +VSK
Sbjct: 348 FMDDICRLNVALTRAKQSLIICGNFMSLRGERVWSDLIEDAKERKLIKKVSK 399
>gi|401882761|gb|EJT47005.1| hypothetical protein A1Q1_04248 [Trichosporon asahii var. asahii CBS
2479]
Length = 1986
Score = 173 bits (438), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 115/349 (32%), Positives = 179/349 (51%), Gaps = 50/349 (14%)
Query: 433 KRDDSAADKQKH--GATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIID 490
K D+A D +H GA R +D A+L +A I+C+TLS +G +L+ + F+ VIID
Sbjct: 1543 KAKDAARDATRHLDGARRAAKD----AVLKDADIICATLSGAGQEVLAP--YTFETVIID 1596
Query: 491 EAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVK 550
EAAQA+E + L+PL GC++ +VG P + G + + R P +
Sbjct: 1597 EAAQAIEMSCLIPLKYGCQRCIMVGAPAD--------DFQSGGRAKQIQSKSFRPHCPAE 1648
Query: 551 MLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQ 610
+ QYRMHPE+ PS+ FYD L+DG D++ T WH+ FGP+ F +++ G ES+
Sbjct: 1649 GI--QYRMHPEISVLPSKVFYDSRLKDGPDMDKKTVAVWHKKPIFGPYHFINVN-GVESK 1705
Query: 611 PAGSGSWINIDEVDFVLLLFHKLISMY-PQLKSSSQLAIISPYRHQVKQFQERFKETFGV 669
S N +E + LF L + ++ ++ +I+ YR Q+ + + RF++ FG
Sbjct: 1706 AGMSTK--NTEEAQVAVDLFRNLKQQFGSRVNLEMRVGVITMYREQLNELKRRFQDAFG- 1762
Query: 670 ESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGC 729
++++D T+D IGFL D+RRMNV +TRAKSS+ V+G
Sbjct: 1763 --RQILD--TID----------------------IGFLRDFRRMNVALTRAKSSLFVIGN 1796
Query: 730 ASTL-REDKHWNNLVKSAEKQDCLFRVSKPYASFFSDENLESMRKNATT 777
A+TL R D W +V A + L + P A+ + M N +
Sbjct: 1797 AATLERSDAKWKTIVSDARDRGLLIDPNVPPAAQHRPASANGMSANGAS 1845
>gi|358057220|dbj|GAA96829.1| hypothetical protein E5Q_03501 [Mixia osmundae IAM 14324]
Length = 925
Score = 173 bits (438), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 130/390 (33%), Positives = 203/390 (52%), Gaps = 40/390 (10%)
Query: 376 VLVCAPSNSALDEIV-------LRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAI-- 426
+LVCAP++ A+D+++ LR L G+ D+ S P + + H + +
Sbjct: 508 ILVCAPTHVAVDQLLARAVKAGLRPLRVGLEDKVSPSAEPYCMLAQVARHPFAEKLEVMS 567
Query: 427 DHL--VEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVI---VCSTLSFSGSALL-SKL 480
D + ++ +R AA + T+ R + S E++I +CS + S L + +
Sbjct: 568 DRIRGLDHQRIGPAATPDEAVDTKFKR-VLSSRYFLESLIWADICSNVDVIFSTCLGASV 626
Query: 481 NH----GFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGT 536
+H F +V IDEAAQ E +TLVPL G +Q+ L+GD QLP+ +SP A G+
Sbjct: 627 SHVASIDFPIVFIDEAAQCNEASTLVPLMKGSQQLVLIGDHKQLPSIAMSPDATQEGFNI 686
Query: 537 SLFKRLQRAG-YPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCF 595
SLF+RL + P ML TQYRMHP++ FP+ FY L D ++ F
Sbjct: 687 SLFERLMVSKRVPSVMLDTQYRMHPDISKFPNMAFYRGQLRDAPST--LKSKQAAIRSRF 744
Query: 596 GP--------FSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLA 647
P F D E KE + S+IN E + + L+ L++ L+ S +
Sbjct: 745 SPAGKSSALTFINCDGLEQKEGK-----SYINEGEAEEITLIVRDLLARNSDLRCSD-IG 798
Query: 648 IISPYRHQVKQFQERFKETFGVESQKVVD---ITTVDGCQGREKDVAIFSCVRASDKKSI 704
II+PY QV + + +++ + VD +++VDG QGREK+V +FS VR++ +
Sbjct: 799 IITPYAGQVHRLRRMMLQSWRFPAGARVDQIEVSSVDGFQGREKEVIVFSAVRSNKHSQL 858
Query: 705 GFLADYRRMNVGITRAKSSILVVGCASTLR 734
GFL+D RR+NV +TRAK+++ VVG A TL+
Sbjct: 859 GFLSDRRRLNVALTRAKAALFVVGNALTLQ 888
>gi|225851051|ref|YP_002731285.1| DNA helicase [Persephonella marina EX-H1]
gi|225645408|gb|ACO03594.1| putative DNA helicase [Persephonella marina EX-H1]
Length = 653
Score = 172 bits (437), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 115/318 (36%), Positives = 174/318 (54%), Gaps = 29/318 (9%)
Query: 448 RKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATG 507
RK D I + ILN A ++C+T S +GS LS ++ FDVV IDEA+Q+ EP+ L+P+ G
Sbjct: 349 RKIEDRIINDILNSAEVICATNSTAGSEFLS--DYVFDVVFIDEASQSTEPSCLIPVIKG 406
Query: 508 CKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYP--VKMLKTQYRMHPEVRSF 565
K V + GD QLP TV++P A+ L + ++F+R + YP MLK QYRM+ ++ F
Sbjct: 407 LK-VVMAGDHKQLPPTVLNPDAKDLSF--TMFERFMKI-YPENTYMLKIQYRMNDIIKQF 462
Query: 566 PSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFS------FFDIHEGK--ESQPAGSGSW 617
PS EFYD L V+D D P + F D EGK E Q GS S
Sbjct: 463 PSEEFYDGQLISDESVKDRKLSDITGKEGDAPITDDTPVVFIDT-EGKFLEKQKKGSRSK 521
Query: 618 INIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDI 677
N +E V + KL + + + +I+PY+ ++ + V++
Sbjct: 522 YNPEEAKAVKSIVEKLKEIGVL---TEDIGVITPYKDHEDYLKKIIPD---------VEV 569
Query: 678 TTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDK 737
TVDG QGREK+V + S VR++ ++ IGFL D RR+NV +TRAK ++++G + TL ++
Sbjct: 570 KTVDGFQGREKEVIVISLVRSNPEEEIGFLDDLRRLNVALTRAKRKVIIIGDSKTLSSNE 629
Query: 738 HWNNLVKSAEKQDCLFRV 755
+ L+K +++ V
Sbjct: 630 TYRKLIKFIKEKGTFVTV 647
>gi|9758526|dbj|BAB08973.1| unnamed protein product [Arabidopsis thaliana]
Length = 536
Score = 172 bits (437), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 101/289 (34%), Positives = 165/289 (57%), Gaps = 9/289 (3%)
Query: 472 SGSALLSKLNHG-FDVVIIDEAAQAVEPATLVPLAT-GCKQVFLVGDPVQLPATVISPVA 529
SG+A +++ G +V+++DEAAQ E ++ L G + L+GD QLPA V +
Sbjct: 233 SGAAEINEERTGNIEVLVVDEAAQLKECESVAALQLPGLRHAILIGDEFQLPAMVHNDQC 292
Query: 530 EHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVED--YTTR 587
E +G SLF+RL G+ +L QYRMHP + FP +EFY ++D ++V++ Y R
Sbjct: 293 EKAKFGRSLFERLVLLGHKKHLLDVQYRMHPSISRFPYKEFYGGRIKDAANVQESIYQKR 352
Query: 588 DWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLA 647
+ + FG FSF ++ GKE G S N+ EV V + L + + K +
Sbjct: 353 -FLQGNMFGSFSFINVGRGKEEFGDGD-SPKNMVEVAVVSEIISNLFKVSRERKMKMSVG 410
Query: 648 IISPYRHQVKQFQERFKETFGVESQKV--VDITTVDGCQGREKDVAIFSCVRASDKKSIG 705
+I+PY+ QV+ QER ++ + S ++ V++ +VDG QG E+D+ I S VR++ +G
Sbjct: 411 VITPYKGQVRAIQERIRDKYSSLSGELFTVNVRSVDGFQGGEEDIIIISTVRSNSNGKVG 470
Query: 706 FLADYRRMNVGITRAKSSILVVGCASTL-REDKHWNNLVKSAEKQDCLF 753
FL++ +R NV +TRA+ + V+G STL R W NL+ ++++ C +
Sbjct: 471 FLSNRQRANVALTRARHCLWVIGNESTLARSGSIWANLISDSKRRKCFY 519
>gi|406700589|gb|EKD03755.1| hypothetical protein A1Q2_01981 [Trichosporon asahii var. asahii CBS
8904]
Length = 1986
Score = 172 bits (437), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 115/349 (32%), Positives = 179/349 (51%), Gaps = 50/349 (14%)
Query: 433 KRDDSAADKQKH--GATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIID 490
K D+A D +H GA R +D A+L +A I+C+TLS +G +L+ + F+ VIID
Sbjct: 1543 KAKDAARDATRHLDGARRAAKD----AVLKDADIICATLSGAGQEVLAP--YTFETVIID 1596
Query: 491 EAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVK 550
EAAQA+E + L+PL GC++ +VG P + G + + R P +
Sbjct: 1597 EAAQAIEMSCLIPLKYGCQRCIMVGAPAD--------DFQSGGRAKQIQSKSFRPHCPAE 1648
Query: 551 MLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQ 610
+ QYRMHPE+ PS+ FYD L+DG D++ T WH+ FGP+ F +++ G ES+
Sbjct: 1649 GI--QYRMHPEISVLPSKVFYDSRLKDGPDMDKKTVAVWHKKPIFGPYHFINVN-GVESK 1705
Query: 611 PAGSGSWINIDEVDFVLLLFHKLISMY-PQLKSSSQLAIISPYRHQVKQFQERFKETFGV 669
S N +E + LF L + ++ ++ +I+ YR Q+ + + RF++ FG
Sbjct: 1706 AGMSTK--NTEEAQVAVDLFRNLKQQFGSRVNLEMRVGVITMYREQLNELKRRFQDAFG- 1762
Query: 670 ESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGC 729
++++D T+D IGFL D+RRMNV +TRAKSS+ V+G
Sbjct: 1763 --RQILD--TID----------------------IGFLRDFRRMNVALTRAKSSLFVIGN 1796
Query: 730 ASTL-REDKHWNNLVKSAEKQDCLFRVSKPYASFFSDENLESMRKNATT 777
A+TL R D W +V A + L + P A+ + M N +
Sbjct: 1797 AATLERSDAKWKTIVGDARDRGLLIDPNVPPAAQHRPASANGMSANGAS 1845
>gi|449303317|gb|EMC99325.1| hypothetical protein BAUCODRAFT_399389 [Baudoinia compniacensis
UAMH 10762]
Length = 1096
Score = 172 bits (437), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 123/399 (30%), Positives = 197/399 (49%), Gaps = 54/399 (13%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNS----------- 423
+VLVCAPSN A+D++ R+ TG+ K VR+ K+ V+S
Sbjct: 497 QVLVCAPSNVAVDQLCERIHKTGL----------KCVRVTAKSREDVDSPVSFLSLHRQV 546
Query: 424 ------VAIDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALL 477
V ++ L + K + Q + + IL+ A ++C T +G L
Sbjct: 547 QMNDTNVELNKLQQLKAELGELSSQDEKKFKTLTRAAEREILSNADVICCTCVGAGDPRL 606
Query: 478 SKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTS 537
+K F V+IDE+ Q+ EP ++PL GCKQV LVGD QL +++ LG
Sbjct: 607 AKFK--FRTVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMN----ILGCA-- 658
Query: 538 LFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR--DWHEYRCF 595
P++ L+ QYRMHP + FPS FY+ +L++G +++ R D+
Sbjct: 659 ----------PIR-LQVQYRMHPCLSEFPSNMFYEGSLQNGITMQERLLRNVDFPWPVAD 707
Query: 596 GPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQ 655
P F+ + G E A S++N E V + + + +S + II+PY Q
Sbjct: 708 APMMFWS-NLGNEEISASGTSYLNRTEASNVEKIVTRFFKAGVKPES---IGIITPYEGQ 763
Query: 656 VKQFQERFKET--FGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRM 713
+ ++T F E K V++ +VD QGREKD + SCVR++D + IGFL+D RR+
Sbjct: 764 RSYVVQSMQQTGTFRKEIYKEVEVASVDAFQGREKDFIVLSCVRSNDHQGIGFLSDPRRL 823
Query: 714 NVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
NV +TRAK ++++G L + W+ L+ ++++CL
Sbjct: 824 NVALTRAKYGLVILGNPKVLAKHPLWHYLLLHFKERNCL 862
>gi|15607027|ref|NP_214409.1| DNA helicase [Aquifex aeolicus VF5]
gi|2984278|gb|AAC07803.1| DNA helicase [Aquifex aeolicus VF5]
Length = 530
Score = 172 bits (437), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 117/305 (38%), Positives = 171/305 (56%), Gaps = 33/305 (10%)
Query: 456 SAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVG 515
+ IL+ A +VC+T S +GS +L LN FDVVIIDEA QA EP+ L+PL G K++ + G
Sbjct: 230 NKILSRAQVVCTTNSTAGSEVLQNLN--FDVVIIDEATQATEPSCLIPLIKG-KKLIMAG 286
Query: 516 DPVQLPATVISPVA-EHLGYGTSLFKRL-QRAGYPV-KMLKTQYRMHPEVRSFPSREFYD 572
D QLP TV+S A E L Y +LF+RL G + ++L+ QYRM+ ++ F ++ FY+
Sbjct: 287 DHKQLPPTVLSQEAQEALSY--TLFERLLDLYGEEIYEILRIQYRMNKKIMEFSNKMFYE 344
Query: 573 EALEDGSDVEDYTTRDWHEYRCFG----PFS----------FFDIHEGKESQPAGSGSWI 618
L VE++T +D PF F ++ GKE Q GS S+
Sbjct: 345 GKLIADKSVENHTIKDLINPEKLKEIPEPFKSVLEPEKVVVFINVR-GKEKQRRGSTSFY 403
Query: 619 NIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDIT 678
N +E + + L+ + + S + +ISPY QV +E K+ F VE +
Sbjct: 404 NEEEAKVAVKIVEYLMKIGLR---SEHIGVISPYEDQVNFLEELLKD-FEVE------VK 453
Query: 679 TVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKH 738
TVDG QGREK+V I S VR+++K IGFL DYRR+NV +TRA+ ++ +G TL D+
Sbjct: 454 TVDGFQGREKEVIIISFVRSNEKGEIGFLKDYRRLNVALTRARRKLITLGNEKTLSSDEV 513
Query: 739 WNNLV 743
+ +
Sbjct: 514 YKQFI 518
>gi|410129749|dbj|BAM64828.1| hypothetical protein [Beta vulgaris]
Length = 1296
Score = 172 bits (437), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 110/310 (35%), Positives = 172/310 (55%), Gaps = 9/310 (2%)
Query: 450 DRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLAT-GC 508
D +I++ L A ++ T S S + + ++ ++++IDEA Q E +L+PL G
Sbjct: 679 DIQAIKTTCLMNARLIFCTAS-SAAKIQTEGMEPIEMLVIDEAGQLKECESLIPLQVPGL 737
Query: 509 KQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSR 568
K L+GD QLPA V S VAE+ +G SLF+RL G +LKTQYRMHP + SFP+
Sbjct: 738 KNAILIGDDKQLPAMVQSKVAENADFGRSLFERLANLGKKKHLLKTQYRMHPSISSFPNE 797
Query: 569 EFYDEALEDGSDVED--YTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFV 626
FY + + D +V++ Y HE FG +SF ++ +GKE+ G S N+ E V
Sbjct: 798 VFYGKQIIDAPNVKERSYEKCFLHE-NMFGTYSFINVSKGKENFDKGY-SPRNLVEAAVV 855
Query: 627 LLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQK--VVDITTVDGCQ 684
+ KL + + + +ISPY+ QV +E+ + + V + +VDG Q
Sbjct: 856 NKIIAKLFNEHCITGKKVSVGVISPYKGQVGLIEEKIGKKYVTYKDHGFSVSVRSVDGFQ 915
Query: 685 GREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTL-REDKHWNNLV 743
G E+DV I S VR++ K S+GFL++++R NV +TRA+ + +VG +TL + W LV
Sbjct: 916 GGEEDVIIISSVRSNGKGSVGFLSNHQRTNVALTRARHCLWIVGNGTTLINSESVWKELV 975
Query: 744 KSAEKQDCLF 753
A+ + C +
Sbjct: 976 VDAKLRGCFY 985
>gi|124511670|ref|XP_001348968.1| erythrocyte membrane-associated antigen [Plasmodium falciparum 3D7]
gi|23498736|emb|CAD50806.1| erythrocyte membrane-associated antigen [Plasmodium falciparum 3D7]
Length = 2283
Score = 172 bits (437), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 137/470 (29%), Positives = 231/470 (49%), Gaps = 49/470 (10%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQKR 434
++L A SN A + +V G++ NI++ VR+G + + AI +E R
Sbjct: 1823 KILAVADSNVAANNLV-----EGLKKRNIQA-----VRVGAGSDSDFHEEAI---MEFHR 1869
Query: 435 DDSAADKQKHGATRKDRDSIRSAILNEAV----IVCSTLSFSGSALLSKLNHGFDVVIID 490
+K+ +K+ +++ + EAV +V +T SG + N F+ VIID
Sbjct: 1870 YKDLLKLRKNNM-QKEAKVMKALLFLEAVKKYNVVIATCVGSGHEIFD--NEKFERVIID 1926
Query: 491 EAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGY-PV 549
E AQ++EP+ L+PL C + L+GD QLP T+ISP A LG SL +R A PV
Sbjct: 1927 ECAQSIEPSNLIPLGHYCNNLVLIGDHKQLPPTIISPDAIKLGLDKSLLERFVMAKIAPV 1986
Query: 550 KMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRD------WHEYRCFGPFSFFDI 603
+L TQ RMH + FP+ FYD L+ + E+ R W +C +F D+
Sbjct: 1987 HLLNTQRRMHLSICVFPNFHFYDNKLKTANVTEE--NRPIIKGFLWPNPKC--RLAFIDV 2042
Query: 604 HEGK---ESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQ 660
GK + + A S N+ E++ ++ + +I+ S ++ I++ Y Q + +
Sbjct: 2043 SIGKPGSKFENAYGTSKFNLYEIEPLITVLKSIIN--EGCVSVDEIGILTAYDAQKMKLK 2100
Query: 661 ERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRA 720
+ ++ F E+ ++I ++DG QG+EKD+ +FS VR++ +GFL D RR+NV +TRA
Sbjct: 2101 KAVQDAFSYEASHRIEIDSIDGFQGKEKDLILFSAVRSNANNELGFLRDARRLNVMLTRA 2160
Query: 721 KSSILVVGCASTLRED-KHWNNLVKSAEKQDCLFRVSK-----PYASFFSDENLESMRKN 774
K +++ G TL D +W +K + + V+K + + L + K
Sbjct: 2161 KRGVILFGDQFTLANDPANWLPWLKWISSKRAIVHVTKLNDHLENTDYSLLDKLNKINKA 2220
Query: 775 ATTDNVQGADGHVPHDDETMHYANTGDA------DQGQADDIDNADGDAE 818
N+ +D + + ++T ++N D D DD+DN DG A+
Sbjct: 2221 VNLKNINVSDNYYFYGNDT-GFSNDYDQNYFTNNDNINMDDVDNKDGAAD 2269
>gi|226481521|emb|CAX73658.1| Regulator of nonsense transcripts 1 [Schistosoma japonicum]
Length = 731
Score = 172 bits (436), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 105/299 (35%), Positives = 153/299 (51%), Gaps = 11/299 (3%)
Query: 458 ILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDP 517
+L A +VC T +G A L +L+ F V+IDE+ QA EP L+PL GC+QV LVGD
Sbjct: 47 LLMAADVVCCTCVTAGDARLERLS--FHSVLIDESTQATEPECLIPLMVGCRQVVLVGDH 104
Query: 518 VQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALED 577
QL + A G SLF+R G L+ QYRMHP + +FPS FY+ +L++
Sbjct: 105 CQLGPVITCKKAASAGLTQSLFERFVLLGIRPIRLQVQYRMHPALSAFPSNVFYEGSLQN 164
Query: 578 GSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKL--IS 635
G ED + + FF G+E S++N E V + K+ I
Sbjct: 165 GVTAEDRCKKTDFPWPNPDRPMFFYCTSGQEEISGNGVSYLNRTEAATVEKIVTKMLKIG 224
Query: 636 MYPQLKSSSQLAIISPYRHQVKQFQE--RFKETFGVESQKVVDITTVDGCQGREKDVAIF 693
++P + + +I+PY Q + + + + ++I +VD QGREKD I
Sbjct: 225 VHP-----NTIGVITPYEGQRAYLAHYLHYSGSLNAKLYQEIEIASVDAFQGREKDYIIL 279
Query: 694 SCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
SCVRA++ + IGFL D RR+NV +TRA+ ++VVG L + WN L+ Q L
Sbjct: 280 SCVRANENQGIGFLNDPRRLNVALTRARYGLIVVGNPKALCKQPLWNQLLHFYRDQHLL 338
>gi|68070943|ref|XP_677385.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56497484|emb|CAH99909.1| hypothetical protein PB000602.03.0 [Plasmodium berghei]
Length = 426
Score = 172 bits (436), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 100/275 (36%), Positives = 151/275 (54%), Gaps = 8/275 (2%)
Query: 461 EAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQL 520
EA ++C+T + L K F+ V++DEA Q+ EP LVPL TG KQ+ LVGD QL
Sbjct: 2 EADVICTTCVGAMDKRLKKFR--FNQVLVDEATQSTEPECLVPLVTGAKQIVLVGDHCQL 59
Query: 521 PATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSD 580
++ A G G SLF+RL G L+ QYRMHP + FPS FYD L++G
Sbjct: 60 GPIIVCKKAASSGLGKSLFERLMMLGITPFRLEVQYRMHPCLSEFPSYVFYDGCLQNGIT 119
Query: 581 VE--DYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYP 638
++ +Y +++ P F++ G E A S++N +E + +L L++
Sbjct: 120 LKEREYPLKNFPWPNSKYPMFFYN-SNGLEEMSASGTSYLNRNEAQNMEILVRALLN--S 176
Query: 639 QLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRA 698
LK ++Q+ +I+PY Q F++ + +++ +VD QGREKD + SCVR+
Sbjct: 177 GLK-ATQIGVITPYEGQRAYITSLFQKNISYQHCLDIEVASVDAFQGREKDFILLSCVRS 235
Query: 699 SDKKSIGFLADYRRMNVGITRAKSSILVVGCASTL 733
+ K IGFL D RR+NV +TRAK +++ G A L
Sbjct: 236 NKKLGIGFLNDPRRLNVALTRAKYGLIICGNAKVL 270
>gi|68076201|ref|XP_680020.1| erythrocyte membrane-associated antigen [Plasmodium berghei strain
ANKA]
gi|56500887|emb|CAI00225.1| erythrocyte membrane-associated antigen, putative [Plasmodium
berghei]
Length = 1480
Score = 172 bits (436), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 138/474 (29%), Positives = 239/474 (50%), Gaps = 48/474 (10%)
Query: 367 NSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAI 426
NSS++ +L A SN A + +V G++ NI++ VR+G + + AI
Sbjct: 1018 NSSKK----ILAVADSNVAANNLV-----EGLKKRNIQA-----VRVGAGSDSDFHEEAI 1063
Query: 427 DHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAV----IVCSTLSFSGSALLSKLNH 482
+E R +K+ +K+ +++ + EAV +V +T SG + N
Sbjct: 1064 ---MEFHRYKDLLKLRKNNM-QKEAKVMKALLFLEAVKKYNVVIATCVGSGHEIFD--NE 1117
Query: 483 GFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRL 542
F+ VIIDE AQ++EP+ L+PL C + L+GD QLP T+ISP A LG SL +R
Sbjct: 1118 KFERVIIDECAQSIEPSNLIPLGHYCTNLVLIGDHKQLPPTIISPDAIKLGLDKSLLERF 1177
Query: 543 QRAGY-PVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRD------WHEYRCF 595
A P+ +L TQ RMH + +FP+ FYD L+ + E+ R W +C
Sbjct: 1178 VMAKIAPIHLLSTQRRMHLSICTFPNFHFYDNKLKTANVTEE--NRPIIKGFLWPNPKC- 1234
Query: 596 GPFSFFDIHEGK---ESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPY 652
F D+ GK + + A S N+ E++ ++ + +++ S ++ I++ Y
Sbjct: 1235 -RLVFIDVSLGKPGSKFENAYGTSKFNLYEIEPLIAVLKSIVN--EGCVSVDEIGILTAY 1291
Query: 653 RHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRR 712
Q + ++ +ETF E+ ++I ++DG QG+EKD+ +FS VR++ +GFL D RR
Sbjct: 1292 DAQKIKLKKAVQETFPYEAAHRIEIDSIDGFQGKEKDLILFSAVRSNANNELGFLRDARR 1351
Query: 713 MNVGITRAKSSILVVGCASTLRED-KHWNNLVKSAEKQDCLFRVSK-----PYASFFSDE 766
+NV +TRAK +++ G TL D +W +K + + ++K A + +
Sbjct: 1352 LNVMLTRAKRGVIIFGDQFTLANDPANWLPWLKWISSKRAIVHITKLNEHLDNADYSLMD 1411
Query: 767 NLESMRKNATTDNVQGADGHVPHDDETMHYANTGDADQGQA-DDIDNADGDAEM 819
L + K+ NV +D + + D+T ++N D Q+ D+ +N+D + ++
Sbjct: 1412 KLNKINKSVNFKNVNVSDNYYFYGDDT-GFSNDYDPKYIQSTDNTNNSDLNNQI 1464
>gi|389738890|gb|EIM80085.1| P-loop containing nucleoside triphosphate hydrolase protein
[Stereum hirsutum FP-91666 SS1]
Length = 806
Score = 172 bits (436), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 115/312 (36%), Positives = 159/312 (50%), Gaps = 39/312 (12%)
Query: 458 ILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDP 517
I+ +A +VC+T S SA L ++ F VV +DEA+ + EPA+L+P+ G + + L+GD
Sbjct: 427 IVAQADVVCTTCITSASAALRIID--FPVVFLDEASMSTEPASLIPIMKGSRHLALIGDH 484
Query: 518 VQLPATVISPVAEHLGYGTSLFKRLQRAG-YPVKMLKTQYRMHPEVRSFPSREFYDEALE 576
QLP + S A+ G G SLF+RL G P ML QYRMHP + FPS EFY+ +L
Sbjct: 485 KQLPPVITSREAQVKGLGISLFERLTEEGDVPSIMLDLQYRMHPSISRFPSEEFYNFSLL 544
Query: 577 DGS-----DVEDYTTRDWHEYRCFGPFS------FFDIHEGKESQPAGSGSWINIDEVDF 625
DG+ +V + P + F H G+ES + S +N +E
Sbjct: 545 DGTVDASGNVRSSLLPPTSSHLVLDPNTGKRPSVVFVDHSGQES--SRDRSKVNWEEAGI 602
Query: 626 VLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQE-------------------RFKET 666
V+ + L+ P LK + + II+PY Q+ T
Sbjct: 603 VVKIVEDLLLSNPDLKGEN-IGIIAPYVAQISLLTRFLHTSTSSPSPSTSSPWSTHLLST 661
Query: 667 FGVE---SQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSS 723
G ++I TVDG +GREKD+ IFS VR +D IGFLAD RR+NVG+TRAK
Sbjct: 662 LGSHRCMQLPSIEIKTVDGFEGREKDIIIFSTVRNNDLGQIGFLADRRRLNVGLTRAKRG 721
Query: 724 ILVVGCASTLRE 735
+ VVG TLRE
Sbjct: 722 LFVVGSLRTLRE 733
>gi|220931020|ref|YP_002507928.1| putative DNA helicase [Halothermothrix orenii H 168]
gi|219992330|gb|ACL68933.1| putative DNA helicase [Halothermothrix orenii H 168]
Length = 754
Score = 172 bits (435), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 148/483 (30%), Positives = 226/483 (46%), Gaps = 110/483 (22%)
Query: 355 PTTGNELKP-EVVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRI 413
P TG + EVVN + + RVL A SN A+D +V RL+ G+ ++R+
Sbjct: 295 PGTGKTVTAVEVVNQAVKSGKRVLATAESNVAVDNLVERLVGYGL----------NVIRV 344
Query: 414 G-------LKAHHSVNSVAIDHLVEQK----RDDSA--------------------ADKQ 442
G L H+++ +DH + +K R+ ++ +DKQ
Sbjct: 345 GHPFRVTPLLREHTLDYRVLDHPLYKKALNLREKASDLKEKQEGLTSPSGQWRRGMSDKQ 404
Query: 443 KHGATRKDR---------------------------DSIRSA-------ILNEAVIVCST 468
RK+R D I S +LN A +VCST
Sbjct: 405 IRINARKNRSFRGVPAKRIKEMAKWLGIQEEINQLFDKINSLEERAVRDLLNSADVVCST 464
Query: 469 LSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPV 528
S +GS LL F++V+IDEA QA EP L+PL K V L+GD QLP TV+S
Sbjct: 465 NSTAGSELLEGWE--FELVVIDEATQATEPGALIPLIKAQKAV-LIGDHKQLPPTVLSQK 521
Query: 529 AEHLGYGTSLFKRLQR--AGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTT 586
A+ G SLF+RL +L+ QYRM+ + F + FY L+ +V ++T
Sbjct: 522 ADKQGLSKSLFERLYSLYGDKYCSLLEIQYRMNDLIMEFSNSHFYGGRLKSAPEVRNHTL 581
Query: 587 RDW----HEYRCF--------GPFSFFDIH--EGKESQPAGSGSWINIDEVDFVLLLFHK 632
RD E +CF P F D E +E S S+ N E + VL L +
Sbjct: 582 RDLGIEISEGKCFTEKGFDPDNPVVFLDTSNMEARERSLPNSDSYDNPVEAEIVLDLVGE 641
Query: 633 LISMYPQLKSSSQLAIISPYRHQVKQFQ--ERFKETFGVESQKVVDITTVDGCQGREKDV 690
+ + + + +A+I+PY+ QV RF+ ++I TVDG QGREK+V
Sbjct: 642 ALKLGLEQR---HIAVITPYKDQVDLLNHLSRFEN---------LEINTVDGFQGREKEV 689
Query: 691 AIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQD 750
+ S VR++ ++IGFL D RR+NV ITR K ++++G ++T+ + +++LV +++
Sbjct: 690 VMISLVRSNKHRNIGFLRDLRRLNVAITRPKRKLIIIGDSNTISGHEVYSSLVDYV-REN 748
Query: 751 CLF 753
LF
Sbjct: 749 GLF 751
Score = 39.3 bits (90), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 25/38 (65%)
Query: 251 EYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQT 288
E++ ++ N SQ A+ + + + LIQGPPGTGKT T
Sbjct: 265 EWVNDDLNLSQKNAVKKAIQARDIYLIQGPPGTGKTVT 302
>gi|222629429|gb|EEE61561.1| hypothetical protein OsJ_15909 [Oryza sativa Japonica Group]
Length = 889
Score = 172 bits (435), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 113/307 (36%), Positives = 165/307 (53%), Gaps = 25/307 (8%)
Query: 454 IRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPL-ATGCKQVF 512
+RSA ++I C+ SGSA L + D+++IDEAAQ E +L+PL +G K
Sbjct: 547 LRSA----SLIFCTV---SGSAKLYE--QKMDLLLIDEAAQLKECESLIPLQVSGLKHAV 597
Query: 513 LVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYD 572
L+GD QLPATV S A+ G SLF+RL G+ +L QYRMHP + FP+ FYD
Sbjct: 598 LIGDECQLPATVKSKAADGALLGRSLFERLTLLGHQKHLLNMQYRMHPSISIFPNFSFYD 657
Query: 573 EALEDGSDVEDYT-TRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFH 631
+ + DG +V R + + FGP+SF +I G+E P + N+ EV + + H
Sbjct: 658 KKILDGPNVTHVRHERSFLQGAMFGPYSFINIENGRE-DPGRNKR--NMAEVAAIKKILH 714
Query: 632 KLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKV----VDITTVDGCQGRE 687
L + II PY QV+ Q G+++ V V + +VDG QG E
Sbjct: 715 NLCKACVGTGEGVSVGIICPYAAQVEAIQS------GIDANAVRPLDVRVNSVDGFQGSE 768
Query: 688 KDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKH-WNNLVKSA 746
+D+ I S VR++ SIGFL++ RR NV +TRA+ + ++G A+TL W LV+ A
Sbjct: 769 EDIIILSTVRSNSTGSIGFLSNRRRANVALTRARHCLWILGDAATLLGSGSVWGELVRDA 828
Query: 747 EKQDCLF 753
+ C +
Sbjct: 829 VDRRCFY 835
>gi|38346803|emb|CAD41371.2| OSJNBa0088A01.10 [Oryza sativa Japonica Group]
Length = 890
Score = 172 bits (435), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 113/307 (36%), Positives = 165/307 (53%), Gaps = 25/307 (8%)
Query: 454 IRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPL-ATGCKQVF 512
+RSA ++I C+ SGSA L + D+++IDEAAQ E +L+PL +G K
Sbjct: 548 LRSA----SLIFCTV---SGSAKLYE--QKMDLLLIDEAAQLKECESLIPLQVSGLKHAV 598
Query: 513 LVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYD 572
L+GD QLPATV S A+ G SLF+RL G+ +L QYRMHP + FP+ FYD
Sbjct: 599 LIGDECQLPATVKSKAADGALLGRSLFERLTLLGHQKHLLNMQYRMHPSISIFPNFSFYD 658
Query: 573 EALEDGSDVEDYT-TRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFH 631
+ + DG +V R + + FGP+SF +I G+E P + N+ EV + + H
Sbjct: 659 KKILDGPNVTHVRHERSFLQGAMFGPYSFINIENGRE-DPGRNKR--NMAEVAAIKKILH 715
Query: 632 KLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKV----VDITTVDGCQGRE 687
L + II PY QV+ Q G+++ V V + +VDG QG E
Sbjct: 716 NLCKACVGTGEGVSVGIICPYAAQVEAIQS------GIDANAVRPLDVRVNSVDGFQGSE 769
Query: 688 KDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKH-WNNLVKSA 746
+D+ I S VR++ SIGFL++ RR NV +TRA+ + ++G A+TL W LV+ A
Sbjct: 770 EDIIILSTVRSNSTGSIGFLSNRRRANVALTRARHCLWILGDAATLLGSGSVWGELVRDA 829
Query: 747 EKQDCLF 753
+ C +
Sbjct: 830 VDRRCFY 836
>gi|71012553|ref|XP_758509.1| hypothetical protein UM02362.1 [Ustilago maydis 521]
gi|46098167|gb|EAK83400.1| hypothetical protein UM02362.1 [Ustilago maydis 521]
Length = 1604
Score = 172 bits (435), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 119/359 (33%), Positives = 177/359 (49%), Gaps = 50/359 (13%)
Query: 451 RDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQ 510
R SIR ILN ++C + +GS L ++ VV DEA+ A EP +LVPL GC+
Sbjct: 1218 RASIRGEILNGVDVICGSAIAAGSPELDMID--LPVVFFDEASMATEPVSLVPLMKGCRH 1275
Query: 511 VFLVGDPVQLPATVISPVAEHLGYGTSLFKRL--QRAGYPVKMLKTQYRMHPEVRSFPSR 568
+ ++GD QLP V S A+ G SLF+RL R+ P ML Q+RMHP + F ++
Sbjct: 1276 LSIIGDHKQLPPVVTSAEAKKAGLSRSLFERLIQSRSSIPSIMLNVQFRMHPTLAEFANQ 1335
Query: 569 EFYDEALEDGSDVE---DYTTRDWHEYRCFG-------PFSFFDIHEGKESQPAGSGSWI 618
FYD AL++G+ E + W C G F D H+G+E++ S S
Sbjct: 1336 TFYDGALQNGTGTELIAPVASSYWPS--CAGVAKQDTQRLCFID-HKGRETKAENSSSLR 1392
Query: 619 NIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKV---- 674
N E VL + L+ P L + + +++PY Q ++ + Q+
Sbjct: 1393 NASEARIVLDVVTDLLRQNPDL-TGDDIGVVTPYAGQQVLLEKMLHNEASLSRQQAAGIL 1451
Query: 675 ---------VDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSIL 725
+D+ TVDG +GREK V +FS VR + + +GFLAD RR+NV +TRA+S++
Sbjct: 1452 GTRSSELGNIDVHTVDGFEGREKKVILFSTVRTNAQGYVGFLADGRRLNVALTRAQSALF 1511
Query: 726 VVGCASTLREDKHWNNLVKSAEKQDCLF-RVSKPYASFFSDENLESMRKNATTDNVQGA 783
++G TL K A+ + + RV P NLE++R A +GA
Sbjct: 1512 LIGNIDTL----------KRAQLSEAAYSRVESP--------NLEALRSYAAYLEKRGA 1552
>gi|168060609|ref|XP_001782287.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666217|gb|EDQ52877.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1117
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 138/406 (33%), Positives = 209/406 (51%), Gaps = 50/406 (12%)
Query: 374 VRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTP---KIVRIGLK--AHHSVNSVAIDH 428
VR+LVCAPSN+ALDE+ RL+N + D++ Y+P IVR G K H V+S+++D
Sbjct: 671 VRILVCAPSNAALDEVAARLVNRML-DKSGDFYSPVDGAIVRFGSKRVIHPLVHSISLDT 729
Query: 429 LVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVI 488
L R S++ + K +L+ A +VC+TLS G+ +L + FDV+I
Sbjct: 730 LC--ARIPSSSHRSKSWVD----------LLDGASVVCATLSGCGNTTFDELENKFDVII 777
Query: 489 IDEAA--------QAVEPATLVPLATGCKQVFLVGDPVQLPAT-VISPVAEHLGYGTSLF 539
+ +A AVE ++ L K+V D L A + YG SLF
Sbjct: 778 VADAGIHMCASYFLAVEAEVVIAL----KRVRGRDDDDFLMANRTYLLLLLGAAYGRSLF 833
Query: 540 KRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRC----- 594
+R + G PV +L TQYRMHP + +PSR+FY AL+D V + E C
Sbjct: 834 ERFEEGGVPVLVLNTQYRMHPSICLYPSRQFYGGALKDSVRVSSMQSIFTDEV-CVGGII 892
Query: 595 -------FGPFSFFDIHEGKESQPAGSGSWINIDE-VDFVLLLFHKLISMYPQLKSSSQL 646
G + F D+ G E + S N +E + ++ + + LK + +
Sbjct: 893 IRGCRFKLGHYCFMDVGWGTEREELVGHSRANFEEALVVCNVVESVVKGLISGLKPN--V 950
Query: 647 AIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGF 706
+I+PY Q + + G++S ++ TVDG QGREKDV + SCVRA + +GF
Sbjct: 951 GVITPYIAQRGVIEGQLARR-GIDS-TACEVNTVDGFQGREKDVIVLSCVRAMADRGLGF 1008
Query: 707 LADYRRMNVGITRAKSSILVVGCASTLRE-DKHWNNLVKSAEKQDC 751
++D RRMNV +TRAK S++VVG A TL++ W +L+ A+++ C
Sbjct: 1009 VSDERRMNVALTRAKYSLIVVGHAETLQKWSPTWGSLIDDAQQRGC 1054
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 130/307 (42%), Gaps = 89/307 (28%)
Query: 45 DRGKLGLREVKDT------YKDVDDYLATFEPLLFEEVKAQII---------QKKDEEEV 89
D LG VKD + + Y++ F+ L+ EEVKA ++ Q + +
Sbjct: 404 DDKSLGASTVKDQLPLPLKFPSIASYVSMFQKLVGEEVKAVLLSDWERFKAEQDSSSQAL 463
Query: 90 QE----------WKLRLVMECGEADGFHLPSVTYEADEVESISPN----DLLLLSKEEFK 135
E W++R +++ D FH +EA +E + N + L ++ E K
Sbjct: 464 TESQDSRAQSSRWQMRSMVQT-MGDPFHY----FEAQWMEGPNVNFDVGEFLCITLPETK 518
Query: 136 EGSTFPTTYAFALVEH---CQANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVS 192
E A A+V + QA LLR R+ +
Sbjct: 519 E------VKAVAIVHYQGRNQAPLLRTRVPWGSSL------------------------- 547
Query: 193 AVEKRLFSLKICSLSTIAREYLALRSVGSL----------PFKDLILSASEKSSG-SQDQ 241
+ L++C++ ++ R YLA+ ++ + P ++ + + G + D
Sbjct: 548 ---GKCVLLRLCNMVSLRRMYLAVSTISDIFSPMQQQILDPLANIKFLRPQTTLGDTVDG 604
Query: 242 SWKIPGLLHEYIK-----ENHNASQLEAIHEGL-LRKAFVLIQGPPGTGKTQTILGLLSA 295
+I L E+++ + N SQL +I L +R+ F L+QGPPGTGKT TI+G++S+
Sbjct: 605 DTRIE-LSFEFLRTFNDRKRLNTSQLLSISCLLHMRQGFQLVQGPPGTGKTSTIIGMVSS 663
Query: 296 ILHATPA 302
+L P+
Sbjct: 664 LLIEEPS 670
>gi|300175280|emb|CBK20591.2| unnamed protein product [Blastocystis hominis]
Length = 861
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 118/374 (31%), Positives = 194/374 (51%), Gaps = 21/374 (5%)
Query: 376 VLVCAPSNSALDEIVLRLLNTGIR--------DENIRSYTPKIVRIGLKAHHSVNSVAID 427
VLVC PSN A DEI R+ TG+ E++ S ++ + +KA + + A +
Sbjct: 473 VLVCTPSNVAADEICARIHRTGVNVVRLMAVSKESMESPVQELC-VHIKARELMKAEASE 531
Query: 428 HLVEQKRDDSAADKQKHGATR--KDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFD 485
L Q R D + ++ K+ + ++ A +V ST +GS LLS F+
Sbjct: 532 LLAIQTRHDDGEEIEEADWRHFMKESGKYKRRVIQSADVVVSTCDSAGSPLLSGC--VFN 589
Query: 486 VVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRA 545
V++DEA+QA E TL+P+ G +V LVGD QL V+S V + GY SLF+RL +
Sbjct: 590 SVLVDEASQATECETLIPIVHGAHRVVLVGDQKQLQPVVLSAVCKRAGYDVSLFERLIDS 649
Query: 546 GYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHE 605
G ++L QYRMHP + F + +FY+ LEDG + + P F+++ +
Sbjct: 650 GMEPQLLCVQYRMHPALSVFSNHKFYEGRLEDGIGEANRPLIKFCYPNTKVPLLFWNV-K 708
Query: 606 GKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKE 665
G+ES S++N+ E V+ + +L+ + K ++ +I+ Y Q + ++
Sbjct: 709 GRESIGNTGSSFLNVQEATAVVNIVKELMQCGIKEK---KIGVITSYTGQKVLLKNLLQQ 765
Query: 666 TFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSIL 725
+ V+ +V+ QGRE D + SCVR++ + IGFL D +R+NV +TRA+ ++
Sbjct: 766 S----RLGKVECASVNTFQGREMDYIVLSCVRSNPMRIIGFLKDPKRLNVALTRARFGMI 821
Query: 726 VVGCASTLREDKHW 739
+VG S L+ + W
Sbjct: 822 IVGDTSVLKYNDLW 835
>gi|193614406|ref|XP_001947281.1| PREDICTED: regulator of nonsense transcripts 1-like [Acyrthosiphon
pisum]
Length = 1118
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 125/399 (31%), Positives = 202/399 (50%), Gaps = 39/399 (9%)
Query: 376 VLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNS----VAIDHLVE 431
VLVCAPSN A+D++ ++ TG+ K+VR+ K+ S++S +A+ + V+
Sbjct: 509 VLVCAPSNIAVDQLTEKIHRTGL----------KVVRLCSKSRESIDSPVSFLALHNQVQ 558
Query: 432 QKRDDSAADKQKH-----GATRKDRDSIRSAI--------LNEAVIVCSTLSFSGSALLS 478
+ + K + G D + S + L A ++C+T +G L
Sbjct: 559 KLPSNGVLQKLQQLKNETGELSMDDEKRYSVLKKVAEQELLEAADVICTTCVGAGDPRLM 618
Query: 479 KLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSL 538
+ F ++IDE+ QA EP +VP+ G +Q+ LVGD QL V A + G SL
Sbjct: 619 QFK--FHSILIDESVQATEPECMVPVVHGVQQLILVGDHCQLGPVVTCKKAANAGLTQSL 676
Query: 539 FKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR--DWHEYRCFG 596
F+RL G L+ QYRMHPE+ F S FY+ +L++G +D R ++
Sbjct: 677 FERLVVLGIRPFRLEVQYRMHPELSRFSSNFFYEGSLQNGVCADDRKLRKIEFPWPVADE 736
Query: 597 PFSFFDIHEGKESQPAGSG-SWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQ 655
P F+ +E AGSG S++N E V + + + + Q+ II+PY Q
Sbjct: 737 PMLFYATLGHEEI--AGSGTSYLNRTEAANVEHIATRFLRCGVR---PDQIGIITPYEGQ 791
Query: 656 VKQFQE--RFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRM 713
+ +++ + + ++I +VD QGREKD I SCVR+++ + IGFL D RR+
Sbjct: 792 RAYLVQYMQYQAPLPAKLYQKIEIASVDAFQGREKDFIIMSCVRSNENQGIGFLNDPRRL 851
Query: 714 NVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
NV +TRAK +L+VG L + + WN+L+ + ++ L
Sbjct: 852 NVALTRAKYGLLIVGNPKVLSKKQLWNHLLNYYKAKNVL 890
>gi|85001273|ref|XP_955355.1| regulator of nonsense transcripts-related protein [Theileria annulata
strain Ankara]
gi|65303501|emb|CAI75879.1| regulator of nonsense transcripts-related protein, putative
[Theileria annulata]
Length = 1189
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 128/398 (32%), Positives = 205/398 (51%), Gaps = 49/398 (12%)
Query: 374 VRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQK 433
+R+L A SN A D ++ + +NI++ +RIG + + + +I +L +
Sbjct: 747 IRILAVADSNIAADNLI-----DALTKKNIQA-----LRIGQSSEYELQEESIKNLDRYQ 796
Query: 434 RDDSAADKQKHGATRKDRDSIRSAILNEAV----IVCSTLSFSGSALLSKLNHGFDVVII 489
K K G K+ +++ + +EA+ I+ +T SG+ LLS N+ F VII
Sbjct: 797 ----TYLKLKMGGHYKEAKNLKVLLYSEAIKQHNIIIATCVGSGNDLLS--NYQFSHVII 850
Query: 490 DEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRL-QRAGYP 548
DE +Q++E + L+P+ GCK + L+GD QL T+IS A LG SL +RL Q P
Sbjct: 851 DECSQSIEMSNLIPIGKGCKSLVLIGDHKQLRPTIISNYALKLGLDKSLLERLIQEEVAP 910
Query: 549 VKMLKTQYRMHPEVRSFPSREFYDEAL--EDGSDVEDYTTRDWHEYRCF----------- 595
V ML Q RMHP + FP+ FY + +D +D+ R + F
Sbjct: 911 VHMLNVQRRMHPSIIEFPNMHFYANKIFNQDVNDINRSMIRGFKWPVPFYNLVFIDVSTP 970
Query: 596 GPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLIS---------MYPQLKSS--- 643
P + F+I +GK +I + + L++++K I + LKS+
Sbjct: 971 SPNTQFEIPQGKSKINMILIIYIIFNYLQNYLIIYNKKIFSEIKCVIALLNSFLKSNDVK 1030
Query: 644 -SQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKK 702
Q+ I++PY Q ++ K V+S ++++ +VDG QGREKD+ IFS VR++ K
Sbjct: 1031 EQQIGILTPYDAQKLMIKKHLKPLKEVQSH-LIEVDSVDGFQGREKDLIIFSAVRSNMVK 1089
Query: 703 SIGFLADYRRMNVGITRAKSSILVVGCASTLREDK-HW 739
IGFL D RRMNV +TRA+ ++V+G + TL D+ +W
Sbjct: 1090 DIGFLRDPRRMNVMLTRARRGLVVLGDSHTLMSDRENW 1127
>gi|297805244|ref|XP_002870506.1| hypothetical protein ARALYDRAFT_493692 [Arabidopsis lyrata subsp.
lyrata]
gi|297316342|gb|EFH46765.1| hypothetical protein ARALYDRAFT_493692 [Arabidopsis lyrata subsp.
lyrata]
Length = 867
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 110/343 (32%), Positives = 180/343 (52%), Gaps = 16/343 (4%)
Query: 449 KDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLAT-G 507
++ + IR L A I+ T S + + ++ D++++DEAAQ E ++ L G
Sbjct: 521 ENYEDIRKFCLQNADIILCTASSVANMVPERIG-SVDLLVVDEAAQLKECESVTALQLPG 579
Query: 508 CKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPS 567
+ L+GD QLPA V S E +G SLF+RL G+ +L QYRMHP + FP+
Sbjct: 580 LRHALLIGDEYQLPAMVHSKECEKAKFGRSLFERLVLIGHNKHLLNVQYRMHPSISCFPN 639
Query: 568 REFYDEALEDGSDVED--YTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDF 625
+EFYD + D S V++ Y R + + + FG FSF ++ GKE G S N+ EV
Sbjct: 640 KEFYDGRITDASIVQERIYEKR-FLQGKMFGSFSFINVGRGKEEFCDGH-SPKNMVEVAV 697
Query: 626 VLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKV--VDITTVDGC 683
+ + L + + +ISPY+ QV+ QER + +G S ++ +++ +VDG
Sbjct: 698 ISEIISNLFKVSSLRNQKMSVGVISPYKGQVRAIQERIGDKYGSLSGQLFTLNVQSVDGF 757
Query: 684 QGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLR-EDKHWNNL 742
QG E+D+ I S VR++ ++GFL++++R NV +TRA+ + V+G +TL W L
Sbjct: 758 QGGEEDIIIISTVRSNVNGNVGFLSNHQRANVALTRARHCLWVIGNETTLALSGSIWAEL 817
Query: 743 VKSAEKQDCLFRVSKPYASFFSDENLESMRKNATTDNVQGADG 785
+ + + C + D+NL +A D+V + G
Sbjct: 818 ISESRTRGCFYDA-------VDDKNLRDAMSDALLDDVSSSFG 853
>gi|326436499|gb|EGD82069.1| ATP-dependent helicase NAM7 [Salpingoeca sp. ATCC 50818]
Length = 1192
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 125/406 (30%), Positives = 194/406 (47%), Gaps = 46/406 (11%)
Query: 373 RVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNS----VAIDH 428
R +VLVCAPSN A++ + R+ TG+ K+VR+ K + +++ +
Sbjct: 631 RGQVLVCAPSNIAVEHLAQRIHLTGV----------KVVRVAAKTREQLEGDASFLSLHN 680
Query: 429 LVEQKRDDSA----------------ADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFS 472
VE S AD++ + R+ I L +A ++C T +
Sbjct: 681 QVENYTGSSKFTKLTKLKKELGELSEADERMY---RRLYKKIEDIFLRKADVICCTCAGG 737
Query: 473 GSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHL 532
G + + V++DEA QA EP L+PL G QV LVGD QL V+ A +
Sbjct: 738 GDRRIVA-GKPYRTVLVDEATQATEPEILIPLVLGANQVILVGDHCQLGPVVMCKKAANA 796
Query: 533 GYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDV--EDYTTRDWH 590
G SLF+RL G L+ QYRMHP + FPS FY+ +L++G + D+
Sbjct: 797 GLAHSLFERLVVHGVRPVRLQVQYRMHPALSEFPSNTFYEGSLQNGVTAAEREQPAVDFP 856
Query: 591 EYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLK-SSSQLAII 649
P F+ G+E A S++N E V K+++ + + + Q+ II
Sbjct: 857 WPNPEVPMLFY-ASMGREEMAASGSSYLNRTEAANV----EKIVTRFMRAGITPDQIGII 911
Query: 650 SPY---RHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGF 706
+PY R + Q+ F + +++ +VD QGREKD I SC R++D + IGF
Sbjct: 912 TPYEGQRAHIVQYMN-FHGAARRSFYEALEVASVDSFQGREKDYIILSCTRSNDHQGIGF 970
Query: 707 LADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
L D RR+NV +TRAK +++VG L + W+NL+ ++Q L
Sbjct: 971 LNDPRRLNVALTRAKYGLILVGNPRALSKQALWHNLLLHFKEQGVL 1016
>gi|308810613|ref|XP_003082615.1| tRNA-splicing endonuclease positive effector (SEN1) (ISS)
[Ostreococcus tauri]
gi|116061084|emb|CAL56472.1| tRNA-splicing endonuclease positive effector (SEN1) (ISS)
[Ostreococcus tauri]
Length = 545
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 130/409 (31%), Positives = 196/409 (47%), Gaps = 47/409 (11%)
Query: 376 VLVCAPSNSALDEIVLRLLNTGIRDEN--IRSYTPKIVRIGL--KAHHSVNSVAIDHLVE 431
VL A SN A+D I+ G+ E I ++VR+G K + + +D +
Sbjct: 140 VLASAASNVAVDNIL-----EGLAKEKFVIDGRPLRVVRLGAPAKVQPWLQELTLDAQIA 194
Query: 432 Q---------KRD------DSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSAL 476
Q RD A +Q+ AT+ + + +S IL +VCST +G L
Sbjct: 195 QHPLGRQAAAMRDAIRGLSGPAYARQRKQATQLELTAAKS-ILKSVDVVCSTCVGAGDDL 253
Query: 477 LSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGT 536
L L F V ++DEA Q EPA L+ L+ V LVGD QLP TV+S A G
Sbjct: 254 LEDLT--FPVTVLDEATQCTEPAALIALSKALSAV-LVGDSRQLPPTVVSRDAVDAGLQI 310
Query: 537 SLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRD---WHEYR 593
S+F+R++R G V +L QYRMHP + FPS+ FY + +D W +
Sbjct: 311 SIFERMERLGVKVSLLDLQYRMHPLIAEFPSQAFYSGKVGSAPTPQDRPIVPGVAWPKPN 370
Query: 594 CFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYR 653
P F +I++ + P G+ S N++E + + K+++ L + +ISPY
Sbjct: 371 V--PVVFLEINDAECRAPDGN-SLYNVEEAKTAITVVKKILA-SGDLAGPGDIGVISPYA 426
Query: 654 HQVKQFQERFKETFGVESQKVVDIT-----------TVDGCQGREKDVAIFSCVRASDKK 702
QV+ QE + G + +D T +VDG QGREK+V + VR++
Sbjct: 427 AQVRLLQEEYG-VLGTAKRNYLDYTDEDKMKELEIRSVDGFQGREKEVIVLCTVRSNTGG 485
Query: 703 SIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDC 751
IGF+ D RR+NVGITRA+ ++V+G TL ++ W K ++ C
Sbjct: 486 GIGFVDDPRRLNVGITRARRGLIVLGNRRTLSTNEIWRKWFKWIDQYGC 534
>gi|219129129|ref|XP_002184749.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217403858|gb|EEC43808.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 268
Score = 171 bits (433), Expect = 1e-39, Method: Composition-based stats.
Identities = 107/276 (38%), Positives = 149/276 (53%), Gaps = 12/276 (4%)
Query: 462 AVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLP 521
A ++C T SG +L + FD V++DEA QA EPA LVPL GC+Q+ LVGD QLP
Sbjct: 1 AQVICCTCIGSGGDILDAMT--FDRVLLDEATQATEPAVLVPLMRGCRQLVLVGDHCQLP 58
Query: 522 ATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDG-SD 580
TV+S AE G+G LF R+ G P ML TQYRMHP + FPS FY L +G S
Sbjct: 59 PTVLSTRAEEEGHGVPLFSRMVACGVPPYMLDTQYRMHPCIAMFPSDLFYGGLLRNGVSA 118
Query: 581 VEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQ- 639
E + R P +F I +G E S D +S+ Q
Sbjct: 119 PERRPLAGFPWPREEFPVAFLPI-QGVEMDDGVS------KYNDAEAAAACNAVSLLLQG 171
Query: 640 -LKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRA 698
S+S +A+++PY Q + + + +++ +VDG QGREK+ +FS VR+
Sbjct: 172 GQCSASDIAVVTPYAAQARLIRRMIRRILPDSGPPFIEVASVDGFQGREKEAVVFSAVRS 231
Query: 699 SDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLR 734
+D SIGF +D+RR+NV TRA+ +++V+G TLR
Sbjct: 232 NDYGSIGFTSDWRRVNVSFTRARRALIVIGNEHTLR 267
>gi|296109905|ref|YP_003616854.1| DNA helicase [methanocaldococcus infernus ME]
gi|295434719|gb|ADG13890.1| DNA helicase [Methanocaldococcus infernus ME]
Length = 639
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 161/536 (30%), Positives = 251/536 (46%), Gaps = 107/536 (19%)
Query: 251 EYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGK----TQTILGLLSAILHATPARVHS 306
E+ + N SQ A+ +L K LI GPPGTGK T+ I+ + H A S
Sbjct: 169 EFYDKELNESQKRAVKRAILSKDLYLIHGPPGTGKTRTLTEVIVQEVKFNKHKVLATADS 228
Query: 307 KGGLREI-----KRGPELPMHEKYNHWGRAS--------PWLVGANPR--------DNIM 345
I K+ P L + + H R S P+L+ +P+ + I
Sbjct: 229 NIAADNILEYLIKKYPFLKVV-RIGHPTRISKDLIEHSLPYLIECHPKYQKVLKLKEKIS 287
Query: 346 PIDGDDGFFPTTGNELKPEVVNSSRRYRV-----RVLVCAPSNSALDEIVLRLLNTGIRD 400
I + F LKP S R+R ++L A N G+
Sbjct: 288 EIKEERDKF------LKP-----SPRWRRGMSDDQILKVAKKNKDY---------RGVPK 327
Query: 401 ENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILN 460
E I+S I ++ V +D L +K AD+ I+
Sbjct: 328 EKIKSMAQWI------KKNAKIKVLVDKL--EKLSKEIADE----------------IIK 363
Query: 461 EAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQL 520
EA ++ ST S +GS +L ++ FDVV+IDE +QA+EP+ L+P+ G K + + GD QL
Sbjct: 364 EADVIVSTNSMAGSEVLK--DYFFDVVVIDEGSQAMEPSCLIPIIKGEK-LIMAGDHKQL 420
Query: 521 PATVISPVAEHLGYGTSLFKRLQRAGYP--VKMLKTQYRMHPEVRSFPSREFYDEALEDG 578
P TV+S E +LF++L + YP +L+ QYRM+ ++ FP+R FY+ L+
Sbjct: 421 PPTVLSDNEE---LKKTLFEKLIKK-YPEFSSILEIQYRMNEKIMEFPNRMFYENKLKAA 476
Query: 579 SDVEDYTTRDW--------HEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLF 630
V++ T D + P FF + +G+E + S S+ N +E VL +
Sbjct: 477 ESVKNITLMDLVKEVDEEDKDIINKIPVQFFHV-DGEEKRDKDSPSYYNEEEAKKVLEVV 535
Query: 631 HKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDV 690
KL+ K +++I+PY QV+ + F+E G++ V++ TVDG QGRE +
Sbjct: 536 KKLV------KYKIPVSVITPYDAQVRLLRRMFEEE-GLD----VEVNTVDGFQGRENEA 584
Query: 691 AIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSA 746
+ S VR K+ GFL DYRR+NV ITRAK ++++G + L++D +N ++K A
Sbjct: 585 IVISFVRT---KNFGFLKDYRRLNVAITRAKRKLILIGNENLLKKDTIYNEMLKWA 637
>gi|359490548|ref|XP_002267012.2| PREDICTED: uncharacterized protein LOC100267290 [Vitis vinifera]
Length = 1115
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 106/312 (33%), Positives = 167/312 (53%), Gaps = 17/312 (5%)
Query: 452 DSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLA-TGCKQ 510
D I++ L A ++ T S S ++ + F++++IDEAAQ E + +PL G +
Sbjct: 607 DEIKNFCLCNASLIFCTASSSAKLHMAGM-KPFELLVIDEAAQLKECESAIPLQLAGLRH 665
Query: 511 VFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREF 570
LVGD +QLPA V S ++ +G SLF+RL G+ +L QYRMHP + FP++EF
Sbjct: 666 AILVGDELQLPAMVKSKISTSAEFGRSLFERLVSLGHRKHLLNLQYRMHPSISLFPNQEF 725
Query: 571 YDEALEDGSDVEDYTTRDWHEYRCF------GPFSFFDIHEGKESQPAGSGSWINIDEVD 624
Y+ + D +V++ + + RCF G +SF ++ G E Q + S S N+ EV
Sbjct: 726 YNNKISDAPNVKERSYK-----RCFLQGDMYGSYSFINVAYGNEEQ-SNSHSTRNMVEVV 779
Query: 625 FVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQK--VVDITTVDG 682
V + KL K + +ISPY QV QE+ +T+ + V + +VDG
Sbjct: 780 AVSEIVAKLFKESVANKQKVSVGVISPYNAQVFAIQEKLGKTYSTSTHSDFSVSVRSVDG 839
Query: 683 CQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKH-WNN 741
QG E+DV I S VR++ +GFL++ +R NV +TRA+ + ++G TL W
Sbjct: 840 FQGGEEDVIIISTVRSNLNGKVGFLSNRQRANVALTRARHCLWILGNGPTLANSGTIWTK 899
Query: 742 LVKSAEKQDCLF 753
LV +A+ + C +
Sbjct: 900 LVSNAKARGCFY 911
>gi|313674250|ref|YP_004052246.1| DNA helicase [Marivirga tractuosa DSM 4126]
gi|312940948|gb|ADR20138.1| DNA helicase [Marivirga tractuosa DSM 4126]
Length = 655
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 139/447 (31%), Positives = 203/447 (45%), Gaps = 98/447 (21%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGI----------RDENI--------------------- 403
+VLV APSN+A+D I+ +L N I DEN+
Sbjct: 225 KVLVTAPSNTAVDNILEKLQNLEIPSTRIGNPIRMDENLLNLSLDVQLQDHPDYQQANGI 284
Query: 404 -----------RSYTP------------KIVRIG--LKAHHSVNSVAIDHLVEQKRDDSA 438
Y P KI+++ K + + S + + + +
Sbjct: 285 WNAIQVLKKEQNEYIPASGQNRRGLSDNKIIQLASSKKPYRGIQSAKLRKMAKWIKIQQQ 344
Query: 439 ADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEP 498
+K A +I S IL ++ ++C+T S +GS LL + FDVV IDEA Q+ EP
Sbjct: 345 INKNYEQAQALQLSAIES-ILEQSPVICATNSSAGSELLKDI--IFDVVCIDEATQSTEP 401
Query: 499 ATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQR--AGYPVKMLKTQY 556
L+PL G K V L GD QLP TV S A L SLF+R Q+ +L QY
Sbjct: 402 EALIPLVKGRKWV-LAGDHQQLPPTVKSSEASDLS--ISLFERFQKELPANRSNILTIQY 458
Query: 557 RMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFS----------------- 599
RMH E+ F + FY + L+ V ++ D F PF
Sbjct: 459 RMHQEIMRFSNENFYQKKLKAHPSVAKHSLADLP---GFDPFPYVNPALEKVVQSSPAVV 515
Query: 600 FFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLIS--MYPQLKSSSQLAIISPYRHQVK 657
F +G E Q A S SW N E+ + L+S ++P+ + IISPY QV
Sbjct: 516 FVPCEQGVEEQLADSHSWFNKAEIALTKEITDALLSSRLFPE-----DIGIISPYDQQVS 570
Query: 658 QFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGI 717
+ + K+ V+I ++DG QGREK+V I S VR++ K+ IGFL DYRR+NV +
Sbjct: 571 RLKSDLKDYH-------VEIKSIDGFQGREKEVIIISLVRSNLKEDIGFLRDYRRLNVAL 623
Query: 718 TRAKSSILVVGCASTLREDKHWNNLVK 744
TRAK ++++G TL+ + + +L+K
Sbjct: 624 TRAKRKLIIIGSPFTLQSNPIYKSLIK 650
Score = 44.7 bits (104), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 250 HEYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHA 299
H + ++N N+ Q E I++ L+ LI GPPGTGKT T+ L+ ++
Sbjct: 173 HSFQQQNLNSKQQEIINQALVTNDIFLIHGPPGTGKTTTLSYLIKSLFEG 222
>gi|302143703|emb|CBI22564.3| unnamed protein product [Vitis vinifera]
Length = 944
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 106/312 (33%), Positives = 167/312 (53%), Gaps = 17/312 (5%)
Query: 452 DSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLA-TGCKQ 510
D I++ L A ++ T S S ++ + F++++IDEAAQ E + +PL G +
Sbjct: 436 DEIKNFCLCNASLIFCTASSSAKLHMAGMK-PFELLVIDEAAQLKECESAIPLQLAGLRH 494
Query: 511 VFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREF 570
LVGD +QLPA V S ++ +G SLF+RL G+ +L QYRMHP + FP++EF
Sbjct: 495 AILVGDELQLPAMVKSKISTSAEFGRSLFERLVSLGHRKHLLNLQYRMHPSISLFPNQEF 554
Query: 571 YDEALEDGSDVEDYTTRDWHEYRCF------GPFSFFDIHEGKESQPAGSGSWINIDEVD 624
Y+ + D +V++ + + RCF G +SF ++ G E Q + S S N+ EV
Sbjct: 555 YNNKISDAPNVKERSYK-----RCFLQGDMYGSYSFINVAYGNEEQ-SNSHSTRNMVEVV 608
Query: 625 FVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQK--VVDITTVDG 682
V + KL K + +ISPY QV QE+ +T+ + V + +VDG
Sbjct: 609 AVSEIVAKLFKESVANKQKVSVGVISPYNAQVFAIQEKLGKTYSTSTHSDFSVSVRSVDG 668
Query: 683 CQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKH-WNN 741
QG E+DV I S VR++ +GFL++ +R NV +TRA+ + ++G TL W
Sbjct: 669 FQGGEEDVIIISTVRSNLNGKVGFLSNRQRANVALTRARHCLWILGNGPTLANSGTIWTK 728
Query: 742 LVKSAEKQDCLF 753
LV +A+ + C +
Sbjct: 729 LVSNAKARGCFY 740
>gi|168057212|ref|XP_001780610.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667976|gb|EDQ54593.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1687
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 132/396 (33%), Positives = 197/396 (49%), Gaps = 65/396 (16%)
Query: 374 VRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTP---KIVRIGLK--AHHSVNSVAIDH 428
VR+LVCAPSN+ALDE+ +RL + + D+ +Y+P +VR G K H +++D+
Sbjct: 753 VRILVCAPSNAALDEVAVRLTHCMV-DKFGNTYSPMDGTVVRFGSKKVMHSLAQVISLDN 811
Query: 429 LVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVI 488
L + S + IL+ A +VC+TLS G+ +L FD+VI
Sbjct: 812 LALRLSSSSRCSRS------------WVDILDGASVVCATLSGCGNCTFDELEKMFDIVI 859
Query: 489 IDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYP 548
I +AVE L+ L K+V SLF+R Q AG P
Sbjct: 860 I---GKAVEAEVLIAL----KRV-----------------------RGSLFERFQGAGVP 889
Query: 549 VKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTT-------RDWHEYR-C---FGP 597
V ML TQYRMHP + +PS++FY AL D + + R+ R C G
Sbjct: 890 VHMLTTQYRMHPSICCYPSQQFYGGALRDSTRTSSMQSIFRQEVCREGINIRGCKFRLGH 949
Query: 598 FSFFDIHEGKESQPAGSGSWINIDE-VDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQV 656
+ F D+ G E + S N +E + ++ + + LK + L +I+PY Q
Sbjct: 950 YYFMDVGWGIEREEIVGHSRANFEEALVVCNVVEGVVKGLLSGLKPN--LGVITPYIAQR 1007
Query: 657 KQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVG 716
+ + + E G++ ++ TVDG QGREKDV + SCVRA + +GF++D RRMNV
Sbjct: 1008 SEIEGQL-ERRGIDGT-ACEVNTVDGFQGREKDVIVLSCVRAMADRGLGFVSDERRMNVA 1065
Query: 717 ITRAKSSILVVGCASTLRE-DKHWNNLVKSAEKQDC 751
+TRAK S+++VG A TL++ W L+ A K+ C
Sbjct: 1066 LTRAKFSLIIVGHAETLQKWSATWGLLIDDARKRGC 1101
>gi|343427563|emb|CBQ71090.1| related to regulator of nonsense transcripts 1 [Sporisorium
reilianum SRZ2]
Length = 916
Score = 170 bits (430), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 128/398 (32%), Positives = 193/398 (48%), Gaps = 63/398 (15%)
Query: 451 RDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQ 510
R SIR ILN A ++C + +GS L ++ VV DEA+ A EP +LVPL GC+
Sbjct: 537 RASIRGEILNGADVICGSAIAAGSPELDMID--LPVVFFDEASMATEPVSLVPLMKGCRH 594
Query: 511 VFLVGDPVQLPATVISPVAEHLGYGTSLFKRL--QRAGYPVKMLKTQYRMHPEVRSFPSR 568
+ ++GD QLP V S A+ G SLF+RL + P ML Q+RMHP + FP++
Sbjct: 595 LSIIGDHKQLPPVVTSVEAKQGGLSRSLFERLIQSESNIPSTMLNVQFRMHPSLAEFPNK 654
Query: 569 EFYDEALEDGSDVE-------------DYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSG 615
FYD ALE+G E T D + +R F D H+G+E++ S
Sbjct: 655 TFYDGALENGQGTELIAPVASSYWPASGNTAADKNAHR----LCFID-HKGRETKAENST 709
Query: 616 SWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERF--------KETF 667
S N E V+ + L+ P+L + + +++PY Q ++ K+
Sbjct: 710 SLCNAAEARIVVDVVVDLLRQNPEL-TGDDIGVVTPYAGQQILLEKMLHNEASPARKQAA 768
Query: 668 GVESQKV-----VDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKS 722
V + + +D+ TVDG +GREK V +FS VR + +GFLAD RR+NV +TRA+S
Sbjct: 769 SVLATRASELGSIDMHTVDGFEGREKKVILFSTVRTNAHGYVGFLADARRLNVALTRAQS 828
Query: 723 SILVVGCASTLREDKHWNNLVKSAEKQDCLFRVSKPYASFFSDENLESMRKNATTDNVQG 782
++ ++G T + K+ + RV P NLE++R+ A +G
Sbjct: 829 ALFLIGNIDTFK---------KAQLSEAAYSRVESP--------NLEALRRYAAYLEERG 871
Query: 783 A------DGHVPHDDETMHYANTGDADQGQADDIDNAD 814
A G +DE + + DA + + D D AD
Sbjct: 872 AVVRWGSAGAAQMEDEEVEW----DAHETREVDPDAAD 905
>gi|414585634|tpg|DAA36205.1| TPA: hypothetical protein ZEAMMB73_541257 [Zea mays]
Length = 2606
Score = 169 bits (429), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 91/271 (33%), Positives = 149/271 (54%), Gaps = 7/271 (2%)
Query: 484 FDVVIIDEAAQAVEPATLVPL-ATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRL 542
D++I+DEAAQ E ++PL K V LVGD QL V + G+G SLF+RL
Sbjct: 519 LDMLIVDEAAQVKECELVIPLRLCWLKHVVLVGDDCQLRPLV----CKEAGFGISLFERL 574
Query: 543 QRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFD 602
+ +L QYRM P + FP+ +FYD+ + DG +V +D FG ++F +
Sbjct: 575 VILNFEKHLLNIQYRMSPCISLFPNAKFYDKKILDGPNVHSSYNKDCTGLL-FGSYAFIN 633
Query: 603 IHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQER 662
I +G+E + SW N+ EV V+ L + + + + ++SPY QV ++R
Sbjct: 634 ITDGREQKEGAGNSWQNLVEVAVVMHLIRTIFKSWRKRDQGISIGVVSPYSSQVAAIKDR 693
Query: 663 FKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKS 722
+ + V + ++DG QG E D+ I S VR++++ ++GFLAD +R NV +TRA+
Sbjct: 694 LGKKYDTSDNFHVRVKSIDGFQGEEDDIIILSTVRSNERGNVGFLADIQRTNVALTRARH 753
Query: 723 SILVVGCASTL-REDKHWNNLVKSAEKQDCL 752
+ ++G A+TL + W +LV A+++ C+
Sbjct: 754 CLWILGNANTLYKSGTVWTDLVSDAQRRKCI 784
Score = 39.7 bits (91), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 119/301 (39%), Gaps = 63/301 (20%)
Query: 45 DRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKA------QIIQKKDEEEVQEWKLRLVM 98
D K + + ++ +DDYL ++ L EE ++ ++I + ++ +K+
Sbjct: 23 DLYKTKVERIPFSFGSLDDYLRSYMTPLIEETRSCLNSCLELIAEAPSSKILSFKV---- 78
Query: 99 ECGEADGFHLPSVTYE------ADEVESISPNDLLLLSK---EEFKEGSTFPTTYAFALV 149
G H V + + E + D+ +LS E + + + TY A+V
Sbjct: 79 --AGKSGLHSMDVDFWDNGAGFSTETYTARNGDIFVLSNMKPEAADDFNRYGLTYCLAMV 136
Query: 150 EHCQANLLRLRMYLAGEVIHI-NKDAVKSQRLLNIHSLITSSVSA---VEKRL-FSLKIC 204
N Y G + + N ++ +H+ ++ A + K L F +
Sbjct: 137 TEVSMN----DEYQKGFKVKVSNSTGLEGDFSKLVHATFLDNIMANMRIWKALCFDSSMN 192
Query: 205 SLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIKENHNASQLEA 264
+ TI + LA R++G + + S K S ++P + N N SQL+A
Sbjct: 193 NNFTIIKSLLAPRNMG-----EDVCSVCAKKDDCLMSSAELPPV-------NLNQSQLDA 240
Query: 265 I----------HEGLLRKAFVLIQGPPGTGKTQTILGLLSAI-------LHATPARVHSK 307
I H L + LI GPPGTGKT+T+ LL A+ L TP V
Sbjct: 241 IESIISAVRCRHLNLTK----LIWGPPGTGKTKTVSALLWALACLKCRTLTCTPTNVAVV 296
Query: 308 G 308
G
Sbjct: 297 G 297
>gi|444911444|ref|ZP_21231619.1| Superfamily I DNA/RNA helicase [Cystobacter fuscus DSM 2262]
gi|444718202|gb|ELW59018.1| Superfamily I DNA/RNA helicase [Cystobacter fuscus DSM 2262]
Length = 640
Score = 169 bits (429), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 133/414 (32%), Positives = 206/414 (49%), Gaps = 56/414 (13%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDH----LV 430
R+L A SN+A+D ++ L+ G+R +R P V L+ H+++ + DH L
Sbjct: 226 RLLCAAASNAAVDHLLDLCLDKGLR--AVRVGHPARVTPRLQ-EHTLDLIVEDHPDRVLS 282
Query: 431 EQKRDDS------AADKQKHGATRK----------------------DRDSIRSAILNEA 462
+ D++ A ++ G +R+ +R ++R+ +L A
Sbjct: 283 RELFDEAFSLLGYARRQRTQGRSRERFSNARASTTEAKGMLDEARALERKAVRN-VLERA 341
Query: 463 VIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPA 522
+VC TL+ S +L+ + FD+ ++DEAAQ+ EP L+ K V L GDP QLP
Sbjct: 342 QVVCVTLASLDSGVLA--HEEFDLALLDEAAQSTEPLALLGFLRAPK-VVLAGDPQQLPP 398
Query: 523 TVISPVAEHLGYGTSLFKR-LQRAGYPVK-MLKTQYRMHPEVRSFPSREFYDEALEDGSD 580
T++SP A G SLF+R L G VK ML+ QYRM+ + +FPS+E Y L
Sbjct: 399 TILSPEAAKAGLAVSLFERLLADHGDGVKRMLREQYRMNTAIMTFPSKEMYGGELRAHPS 458
Query: 581 VEDYTTRDWHEYRC---FGPFSFFDIHEGK---ESQPAGSGSWINIDEVDFVLLLFHKLI 634
V T D F P + D GK E Q +GS N E D ++ +L+
Sbjct: 459 VAGRTLADVLPPEAQGDFPPVLYLDT-AGKGFEEEQEKDTGSLFNTGEADLIVARVKELL 517
Query: 635 SMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFS 694
+ + +LA+I+PYR Q +ER + V++ TVD QGREKD + S
Sbjct: 518 AAG---IAPRELAVITPYRAQAHALRERVEPL-----SPDVEVDTVDAFQGREKDAILVS 569
Query: 695 CVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEK 748
VR++ + IGFL+D RRMNV +TRA+ + VVG ++TL + ++S ++
Sbjct: 570 LVRSNSEGQIGFLSDLRRMNVALTRARRHLFVVGDSATLSGHAFYARFIESTQE 623
>gi|224373108|ref|YP_002607480.1| putative DNA helicase [Nautilia profundicola AmH]
gi|223589915|gb|ACM93651.1| putative DNA helicase [Nautilia profundicola AmH]
Length = 648
Score = 169 bits (429), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 114/310 (36%), Positives = 169/310 (54%), Gaps = 20/310 (6%)
Query: 449 KDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGC 508
K I IL A IV +T S G L + FD V IDEAAQA+EP+TL+P+ G
Sbjct: 344 KKTQEIMDDILENAQIVFATNSACGGEFLEE--REFDTVFIDEAAQAMEPSTLIPMIKG- 400
Query: 509 KQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYP--VKMLKTQYRMHPEVRSFP 566
KQ+ GD QLP T++S E L SLF+R YP V L QYRM+ ++ FP
Sbjct: 401 KQIIFAGDHKQLPPTILSN-DERLK--VSLFERFSEL-YPKAVHTLGIQYRMNEKINEFP 456
Query: 567 SREFYDEALEDGSDVEDYTTRDWH-----EYRCFGPFSFFDIHEGK--ESQPAGSGSWIN 619
S +FYD ++ ++++ T +D + EY + P F D GK E S S N
Sbjct: 457 SCKFYDCKVKTYEEIKNITIKDLNIQPDSEYGDYEPVVFIDTC-GKFMEKSKKDSPSKYN 515
Query: 620 IDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITT 679
E +FV+ L KL+ + + II+PY+ + ++ + ++++ +
Sbjct: 516 PKEAEFVVSLVEKLLKNGAK---EEHIGIITPYKDHEEYIKKVISSHLHDFTTSLLEVKS 572
Query: 680 VDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHW 739
VDG QGREK++ I S VRA++K+ IGFL+D RR+NV ITRAK ++++G A TL + +
Sbjct: 573 VDGFQGREKEIIILSLVRANEKEEIGFLSDIRRLNVAITRAKRKLVIIGDAKTLLVNDTY 632
Query: 740 NNLVKSAEKQ 749
NL++ +K
Sbjct: 633 KNLIEYIKKN 642
>gi|378756208|gb|EHY66233.1| hypothetical protein NERG_00929 [Nematocida sp. 1 ERTm2]
Length = 788
Score = 169 bits (428), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 106/282 (37%), Positives = 150/282 (53%), Gaps = 34/282 (12%)
Query: 462 AVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLP 521
A +V TLS + S +SK F VVI+DE Q++EP++++PL +++ LVGDP QLP
Sbjct: 394 ASLVFCTLSMAASTAVSK--KEFHVVIVDEVCQSIEPSSIIPLQNSVRRLVLVGDPKQLP 451
Query: 522 ATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDV 581
T+ S E SLF+RL P+ +L TQYRMH ++ FP++ FY L DG +
Sbjct: 452 PTIFS---ESNDLSVSLFERLAETITPL-ILDTQYRMHSDISCFPNKTFYAGKLIDGVVL 507
Query: 582 EDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLK 641
E P + D G E Q S N E+DF+ L ++ Y
Sbjct: 508 ESIV-----------PMALVDT--GGE-QKRNRTSLYNPREIDFIEDLLPYIMDKY---- 549
Query: 642 SSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDK 701
+AII+PY+ Q + K + + ++TVDG QG+EKD I S VR +
Sbjct: 550 --KSIAIITPYKEQSIRLSVNRKII-----NRQITVSTVDGFQGQEKDCIIVSTVRTN-- 600
Query: 702 KSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLV 743
IGFL DYRRMNV +TRAK +++++GC L +DK W LV
Sbjct: 601 -GIGFLNDYRRMNVALTRAKYTVIILGCVRLLEKDKIWKQLV 641
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 116/268 (43%), Gaps = 31/268 (11%)
Query: 39 KNSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKAQIIQKKDEEEVQEWKLRLVM 98
+NS KV +G VK+ Y+ + +Y T+ PL+ E A II KD +++ +V+
Sbjct: 48 ENSTKVKKG------VKNLYRSIREYFITYYPLIINETVASII--KDTKDIMPQ--NVVI 97
Query: 99 ECGEADGFHLPSVTYEADE---VESISPNDLLLL--SKEEFKEGSTFPTTYAFALVEHCQ 153
E + S YE E I+ L+ L SK++ EG P ++ Q
Sbjct: 98 E-------PIISFIYEKKEGANAIGITTKSLVTLGSSKDKSVEGDFMPGDIVM-VIRKGQ 149
Query: 154 ANLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSAVEKRLFSLKICSLSTIAREY 213
+ L L+G I K K + + S + S VE + + ++ + REY
Sbjct: 150 THDLCKNYILSG--IITGKKKFKYTLITSNSSCMALSKKNVEGEYVLVYVSNIISSKREY 207
Query: 214 LALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIKENH---NASQLEAIHEGLL 270
+AL P +++ + + + + H I E + N +Q A+ L
Sbjct: 208 MALLKFSDSPLAKQLMNPTPPVETEKKKVLQAVKEFH--IDEGYKKLNEAQRNAVIMSL- 264
Query: 271 RKAFVLIQGPPGTGKTQTILGLLSAILH 298
+ LIQGPPGTGKTQTI ++S +
Sbjct: 265 NQPLTLIQGPPGTGKTQTISCMISQFIQ 292
>gi|414585753|tpg|DAA36324.1| TPA: hypothetical protein ZEAMMB73_446301 [Zea mays]
Length = 1465
Score = 169 bits (428), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 95/271 (35%), Positives = 146/271 (53%), Gaps = 5/271 (1%)
Query: 490 DEAAQAVEPATLVPLA-TGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYP 548
DEAAQ E TL+PL G + L+GD QLP+ V S +++ +G S+F+RL GY
Sbjct: 826 DEAAQLKECETLIPLQLPGIRHAVLIGDEYQLPSLVKSKISDSANFGRSVFERLSSLGYS 885
Query: 549 VKMLKTQYRMHPEVRSFPSREFYDEALEDGSDV--EDYTTRDWHEYRCFGPFSFFDIHEG 606
+L QYRMHP++ FP FYD L DG +V +DY + + + F P+SF +I
Sbjct: 886 KHLLNIQYRMHPDISRFPVGTFYDGKLSDGPNVSHKDY-NKMFLAGKLFRPYSFINIDGS 944
Query: 607 KESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKET 666
E+ S N EVD V+++ L+ +S + ++ PY QV+ QE+ +
Sbjct: 945 HETNEMHGRSLKNSLEVDAVVMIVQSLLKETLSTRSKLSIGVVCPYNAQVRAIQEKVGKP 1004
Query: 667 FGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILV 726
V + +VDG QG E+D+ I S VR++ ++GFL++ +R NV +TRAK + +
Sbjct: 1005 CRKYDYFSVKVKSVDGFQGAEEDIIIISTVRSNGAGTVGFLSNLQRTNVALTRAKHCLWI 1064
Query: 727 VGCASTL-REDKHWNNLVKSAEKQDCLFRVS 756
VG +TL + W +VK + C F +
Sbjct: 1065 VGNGTTLFNSNSVWQKIVKDTRDRGCFFNAT 1095
>gi|197124729|ref|YP_002136680.1| superfamily I DNA and RNA helicase [Anaeromyxobacter sp. K]
gi|196174578|gb|ACG75551.1| superfamily I DNA and RNA helicase [Anaeromyxobacter sp. K]
Length = 622
Score = 169 bits (428), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 137/409 (33%), Positives = 196/409 (47%), Gaps = 58/409 (14%)
Query: 376 VLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAH--------HSVNSVAID 427
VL APSN A+D +V RL G+ +R P V GL H H +A
Sbjct: 226 VLAAAPSNLAVDNLVERLAAAGL--ACVRVGHPARVLPGLLEHTLEARVEAHEAARIA-Q 282
Query: 428 HLVEQK---RDDSAADKQKHGATR--KDRDSIRSA-----------------ILNEAVIV 465
LV+Q R D+ +QK G R R+ R A +L A +V
Sbjct: 283 GLVDQALALRRDARKRRQKRGPGRFSASREQEREARALLAEARRLEARAEAEVLERAQVV 342
Query: 466 CSTL-SFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATV 524
+TL S G AL + F + ++DEA QAVEPA + L + V L GD +QLP TV
Sbjct: 343 LATLTSLDGPALAGRR---FALAVLDEATQAVEPAAYLALLRADRAV-LAGDHLQLPPTV 398
Query: 525 ISPVAEHLGYGTSLFKRLQRA-GYPVK-MLKTQYRMHPEVRSFPSREFYDEALEDGSDVE 582
+S A+ G G SLF+RL A G + ML Q+RM+ + +FPS Y AL
Sbjct: 399 LSAAAQEGGLGVSLFERLVEAHGDRARVMLAEQHRMNARIMAFPSEALYGGALRAHPAAA 458
Query: 583 DYTTRDWHEYRCFGPFSFFDIHEGK---ESQPAGSGSWINIDEVDFVLLLFHKLISMYPQ 639
D PF D G+ E P GS S N E + +L++
Sbjct: 459 GRAIDD-------APFELVDT-SGRGFEEETPEGSDSKQNTGEAELAAAEVRRLLAAG-- 508
Query: 640 LKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRAS 699
+ +A+ISPY QV +R ++ E + +++ TVDG QGREK+ + S VR++
Sbjct: 509 -LAPGDVAVISPYDAQV----QRLRQLLAEEVEAGLEVDTVDGFQGREKEAVVVSLVRSN 563
Query: 700 DKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEK 748
+ +GFLAD RRMNV +TRA++ ++VVG ST+ + + ++ AE+
Sbjct: 564 EAGEVGFLADVRRMNVALTRARAKLVVVGDGSTVSRHPFYRSFLEHAER 612
>gi|449526409|ref|XP_004170206.1| PREDICTED: uncharacterized protein LOC101231716, partial [Cucumis
sativus]
Length = 804
Score = 169 bits (428), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 104/281 (37%), Positives = 155/281 (55%), Gaps = 8/281 (2%)
Query: 484 FDVVIIDEAAQAVEPATLVPLA-TGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRL 542
+ ++IDEAAQ E +PL K L+GD QL A V S +A+ G+G SLF+RL
Sbjct: 513 LETLVIDEAAQLKECEAAIPLQFPSIKHAILIGDECQLRAMVESKIADEAGFGRSLFERL 572
Query: 543 QRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVED--YTTRDWHEYRCFGPFSF 600
G+ +L Q+RMHP + FP+ +FY + DG +V+ Y + H FG +SF
Sbjct: 573 SSLGHQKHLLNVQHRMHPSISYFPNSKFYANKILDGPNVKTKAYEKKFLHGPM-FGSYSF 631
Query: 601 FDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQ---LAIISPYRHQVK 657
DI+EGKE + + SW N+ EVD V + H L + S + + ++SPY QV+
Sbjct: 632 IDINEGKEEKDGITQSWKNMVEVDVVGKIIHNLYKASCVDRHSKEKISVGVVSPYLAQVE 691
Query: 658 QFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGI 717
+E + S V +++VDG QG EKD+ I S VR++ SIGFL+ +R NV +
Sbjct: 692 AIKENIGRDYSNCSSFSVKVSSVDGFQGGEKDIIIISTVRSNRSSSIGFLSSNQRTNVAL 751
Query: 718 TRAKSSILVVGCASTL-REDKHWNNLVKSAEKQDCLFRVSK 757
TRA+ + ++G +TL D W LV A K+ C F+ ++
Sbjct: 752 TRARYCLWILGNFTTLSNSDSIWGELVFDAMKRSCFFQANE 792
>gi|358384596|gb|EHK22193.1| hypothetical protein TRIVIDRAFT_149633 [Trichoderma virens Gv29-8]
Length = 1731
Score = 169 bits (428), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 128/376 (34%), Positives = 203/376 (53%), Gaps = 41/376 (10%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQKR 434
++LV AP+++A+D ++ R L ++ ++S PK+ L+ V V D + +
Sbjct: 1354 KILVTAPTHNAVDNVMRRYLGRISQEGLLQS--PKMA--PLRVATEVRKVGED--LRKYT 1407
Query: 435 DDSAADKQ---KHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDE 491
D+ A ++ H A R+ + +++A I+ +T +G LL + FD VI+DE
Sbjct: 1408 CDALAGQEVYSSHAAMRQAKQRVKAA-----EIIFTTCIGAGLGLLR--DQVFDTVIVDE 1460
Query: 492 AAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRL-QRAGYPVK 550
A+Q EPA+LVPLA GC++ LVGD VQL TV + +A L + SLF+RL R G
Sbjct: 1461 ASQQTEPASLVPLAKGCQKAILVGDHVQLRPTVQN-IALALDFDVSLFERLYTRDGTTPN 1519
Query: 551 MLK----TQYRMHPEVRSFPSREFYDEALEDGSDVED----YTTRDWHEYRCFG-----P 597
M++ TQYRMHP + SF S+EFY+ L G +D ++ W P
Sbjct: 1520 MVRVMLDTQYRMHPSICSFISKEFYESKLLSGLRDQDRPMPLSSFPWPASPATSDVTHVP 1579
Query: 598 FSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVK 657
F G+E G S N ++VD L + L + + +++ +A+++PY Q +
Sbjct: 1580 RMIFVECSGRED--LGHKSKSNKEQVDLCLSICKLLRTA--RTTNNTSIAVLTPYSRQSE 1635
Query: 658 QFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGI 717
Q G+++ ++I+++DG QGRE D+ IF VR ++ + IGFL D RRMNV +
Sbjct: 1636 LLQRALS---GIQN---IEISSIDGFQGREADIVIFVTVRCNESREIGFLKDLRRMNVAL 1689
Query: 718 TRAKSSILVVGCASTL 733
TRAK ++VVG +TL
Sbjct: 1690 TRAKYGMIVVGNKATL 1705
>gi|82596421|ref|XP_726255.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23481586|gb|EAA17820.1| nam7 protein [Plasmodium yoelii yoelii]
Length = 1791
Score = 169 bits (427), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 132/447 (29%), Positives = 223/447 (49%), Gaps = 46/447 (10%)
Query: 367 NSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAI 426
NSS++ +L A SN A + +V G++ NI++ VR+G + + AI
Sbjct: 1328 NSSKK----ILAVADSNVAANNLV-----EGLKKRNIQA-----VRVGAGSDSDFHEEAI 1373
Query: 427 DHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAV----IVCSTLSFSGSALLSKLNH 482
+E R +K+ +K+ +++ + EAV +V +T SG + N
Sbjct: 1374 ---MEFHRYKDLLKLRKNNM-QKEAKVMKALLFLEAVKKYNVVIATCVGSGHEIFD--NE 1427
Query: 483 GFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRL 542
F+ VIIDE AQ++EP+ L+PL C + L+GD QLP T+ISP A LG SL +R
Sbjct: 1428 KFERVIIDECAQSIEPSNLIPLGHYCTNLVLIGDHKQLPPTIISPDAIKLGLDKSLLERF 1487
Query: 543 QRAGY-PVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRD------WHEYRCF 595
A P+ +L TQ RMH + +FP+ FYD L+ + E+ R W +C
Sbjct: 1488 VMAKIAPIHLLSTQRRMHLSICTFPNFHFYDNKLKTANVTEE--NRPIIKGFLWPNPKC- 1544
Query: 596 GPFSFFDIHEGK---ESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPY 652
F D+ GK + + A S N+ E++ ++ + +++ S ++ I++ Y
Sbjct: 1545 -RLVFIDVSLGKPGSKFENAYGTSKFNLYEIEPLIAVLKSIVN--EGCVSVDEIGILTAY 1601
Query: 653 RHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRR 712
Q + ++ +ETF E+ ++I ++DG QG+EKD+ +FS VR++ +GFL D RR
Sbjct: 1602 DAQKIKLKKAVQETFPYEAAHRIEIDSIDGFQGKEKDLILFSAVRSNANNELGFLRDARR 1661
Query: 713 MNVGITRAKSSILVVGCASTLRED-KHWNNLVKSAEKQDCLFRVSK-----PYASFFSDE 766
+NV +TRAK +++ G TL D +W +K + + ++K A + +
Sbjct: 1662 LNVMLTRAKRGVIIFGDQFTLANDPANWLPWLKWISSKRAIVHITKLNEHLDNADYSLMD 1721
Query: 767 NLESMRKNATTDNVQGADGHVPHDDET 793
L + K NV +D + + D+T
Sbjct: 1722 KLNKINKAVNFKNVNVSDNYYFYGDDT 1748
>gi|297801236|ref|XP_002868502.1| hypothetical protein ARALYDRAFT_915833 [Arabidopsis lyrata subsp.
lyrata]
gi|297314338|gb|EFH44761.1| hypothetical protein ARALYDRAFT_915833 [Arabidopsis lyrata subsp.
lyrata]
Length = 819
Score = 169 bits (427), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 104/313 (33%), Positives = 177/313 (56%), Gaps = 13/313 (4%)
Query: 449 KDRDSIRSAILNEA-VIVCSTLSFSGSALLSKLNHG-FDVVIIDEAAQAVEPATLVPLA- 505
++ + IR L A +I C+ SG+A ++ G + +++DEAAQ E ++ L
Sbjct: 473 ENEEDIRKFCLQNADIIFCTA---SGAAEMNGERTGNVEFLVVDEAAQLKECESVAALQL 529
Query: 506 TGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSF 565
G + L+GD QLPA V + E +G SLF+RL G+ +L QYRMHP + SF
Sbjct: 530 QGLRHAVLLGDEFQLPAMVHNDECEKAKFGRSLFERLVTLGHSKHLLDVQYRMHPSIISF 589
Query: 566 PSREFYDEALEDGSDVED--YTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEV 623
P++EFY ++D ++V++ Y R + + FG FSF ++ GKE G S N+ EV
Sbjct: 590 PNKEFYGGRIKDAANVQESIYEKR-YLQGNMFGSFSFINVGHGKEEFGDGH-SPKNMVEV 647
Query: 624 DFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKV--VDITTVD 681
+ + L + + K + + +I+PY+ QV+ Q+R + + S ++ +++ +VD
Sbjct: 648 AVISEILSNLFKVSSERKINMSVGVITPYKGQVRAIQDRIIDKYSSLSGELFTLNVRSVD 707
Query: 682 GCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTL-REDKHWN 740
G QG E+DV I S VR++ + +GFL++ +R NV +TRA+ + V+G +TL R W
Sbjct: 708 GFQGGEEDVIIISTVRSNCNRKVGFLSNRQRANVALTRARHCLWVIGNETTLARSGSIWA 767
Query: 741 NLVKSAEKQDCLF 753
LV+ ++++ C +
Sbjct: 768 KLVRDSKRRKCFY 780
>gi|399218391|emb|CCF75278.1| unnamed protein product [Babesia microti strain RI]
Length = 1229
Score = 168 bits (426), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 130/421 (30%), Positives = 211/421 (50%), Gaps = 39/421 (9%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQKR 434
++L A SN A D ++ G+ D +I + +RIG + + AI +
Sbjct: 828 KILAVADSNIAADNLL-----QGLTDRDISA-----IRIGQGSEPELQERAIQGMKRYNE 877
Query: 435 DDSAADKQKHGATRKDRDSIRSAILNEAV----IVCSTLSFSGSALLSKLNHGFDVVIID 490
+ D ++ K+ ++++ +++EAV IV +T G+ ++S + F VIID
Sbjct: 878 YTTLRDSGRY----KEAMTLKTQMISEAVKRARIVIATCVGCGNEIVS--SEVFTKVIID 931
Query: 491 EAAQAV-------EPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQ 543
E AQ++ E + ++PL C Q+ L+GD QL T++S A G SL +RL
Sbjct: 932 ECAQSIGKLTLDIECSNIIPLTHSCNQLVLIGDHKQLRPTILSQDALFKGLSISLLERLA 991
Query: 544 -RAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFG-PFSFF 601
A V +L Q RMHP + FP++ FY+ L DG +V YT ++ C F
Sbjct: 992 IFAPSCVHLLNVQRRMHPSISQFPNQHFYEHRLTDGENVFAYTPLKGFKWPCENFNVCFV 1051
Query: 602 DIHEG----KESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVK 657
D+ G +P G + NI E + V+ L IS +S Q+ I++PY Q
Sbjct: 1052 DVSIGCAGSNYERPQGQSKY-NIIETNVVVALLSSFISAGE--ITSRQIGILTPYDSQKY 1108
Query: 658 QFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGI 717
+ + TF + ++I +VDG QG+EKD+ IFS VR++ ++GFL D RRMNV +
Sbjct: 1109 HLKTKINSTFPSDVCNGLEIDSVDGFQGKEKDLIIFSAVRSNSDGTVGFLKDSRRMNVML 1168
Query: 718 TRAKSSILVVGCASTL-REDKHWNNLVKSAEKQDCLFRVS--KPYASFFSDENLESMRKN 774
TRA+ I+VVG TL E +W ++ ++ + R+S K + F S++ L S+ +
Sbjct: 1169 TRARRGIVVVGDRFTLMNETTNWKAWLQFLSDRNSIIRISDLKEHLQFPSEQLLLSINSD 1228
Query: 775 A 775
Sbjct: 1229 C 1229
>gi|146163349|ref|XP_001011272.2| hypothetical protein TTHERM_00146330 [Tetrahymena thermophila]
gi|146146126|gb|EAR91027.2| hypothetical protein TTHERM_00146330 [Tetrahymena thermophila SB210]
Length = 1186
Score = 168 bits (426), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 133/440 (30%), Positives = 212/440 (48%), Gaps = 38/440 (8%)
Query: 343 NIMPIDGDDGFFPT-TGNELKPEV---VNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGI 398
NI I G G T T +L E+ +N +++ ++LVCAPSN A D I R+
Sbjct: 765 NISLIQGPPGTGKTETAAQLVLEIWYKINKNQQNE-KILVCAPSNLAADNISDRI----- 818
Query: 399 RDENIRSYTPKIVRIGLKAHHSVN-SVAIDHLVEQKRDDSAADKQKHGATRKDRDSIRSA 457
+ ++ K++RI +A V S +V K K+ ++ + I +A
Sbjct: 819 ---HAQNREIKVIRIVSQARQRVKVSYQFQDIVLHKVLKKEGFFNKNSVLKRAKQLIENA 875
Query: 458 ILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDP 517
++C+T S + + F V+IDEA QA+EP T++PL K++ L+GD
Sbjct: 876 -----DVICTTCINSVDKFIKGI--SFSTVVIDEANQAIEPETIIPLQHQAKKLILIGDH 928
Query: 518 VQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALED 577
QLP ++S A G SLF RL +AG + L QYRMHPE+R S FY L+D
Sbjct: 929 KQLPPIILSIQASKDGLKRSLFSRLVQAGLIPQFLSIQYRMHPEIRKLASSIFYQNQLKD 988
Query: 578 GSDVEDYTTR---DWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLI 634
G + +D T +W + P F+D+ +G+E S+IN +E V L +LI
Sbjct: 989 GVNEQDRTPTPKFNWLNNKI--PIQFYDV-QGQEITLQDGKSFINEEEAKLVKSLVSQLI 1045
Query: 635 SMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFS 694
+ + + II+PY Q + K + + I T QG+E+D I S
Sbjct: 1046 QAGVK---DNDIGIITPYLSQSNYISQLIKNSN-------ILIDTTYSFQGQERDYIIIS 1095
Query: 695 CVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFR 754
CVR ++ +++G L + +NV ITRAK +L+VG + + W ++ +K +
Sbjct: 1096 CVRINNFQNLGILRTPQLINVSITRAKRGLLIVGNKKHVSYSRWWKQIIDYLDKLKLIQE 1155
Query: 755 VSK-PYASFFSDENLESMRK 773
+ K P + +S EN + + K
Sbjct: 1156 IKKEPIENIYSIENNKIINK 1175
>gi|359490546|ref|XP_002267062.2| PREDICTED: uncharacterized protein LOC100262126 [Vitis vinifera]
Length = 1095
Score = 168 bits (426), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 106/310 (34%), Positives = 169/310 (54%), Gaps = 8/310 (2%)
Query: 452 DSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLA-TGCKQ 510
D I+ L +A ++ T S S L K ++++IDEAAQ E + +PL +G +
Sbjct: 598 DKIKKFCLEKACLLFCTAS-SSVKLKMKGMTPVELLVIDEAAQLKECESTIPLQISGLRH 656
Query: 511 VFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREF 570
LVGD +QLPA V S ++E G+G SLF+RL + +L QYRMHP + FP++EF
Sbjct: 657 AILVGDEMQLPALVKSKISEKAGFGRSLFERLVLLKHEYHLLNIQYRMHPSISFFPNKEF 716
Query: 571 YDEALEDGSDVEDYT-TRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLL 629
Y+ + D +V+D + + + + +GP+SF ++ GKE S N+ EV V +
Sbjct: 717 YENQISDAPNVKDRSYEKQFLQGSMYGPYSFVNVAYGKEEFENHSSR--NMVEVAVVSEV 774
Query: 630 FHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQK--VVDITTVDGCQGRE 687
L K + +ISPY+ QV QE+ + + + ++ V + TVDG QG E
Sbjct: 775 VTSLFKESVSKKQKVSVGVISPYKAQVIAIQEKLGKIYNTDEERDFSVKVCTVDGFQGGE 834
Query: 688 KDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTL-REDKHWNNLVKSA 746
+DV I S VR ++K +GFL+ +R NV +TRA+ + + G + TL W +V+ A
Sbjct: 835 EDVIIISTVRGNEKGLVGFLSKRQRANVSLTRARHCLWIFGESETLVASGTVWKRVVEDA 894
Query: 747 EKQDCLFRVS 756
+++ C + S
Sbjct: 895 KERGCFYNAS 904
>gi|339252438|ref|XP_003371442.1| hypothetical protein Tsp_11650 [Trichinella spiralis]
gi|316968330|gb|EFV52623.1| hypothetical protein Tsp_11650 [Trichinella spiralis]
Length = 650
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 118/391 (30%), Positives = 192/391 (49%), Gaps = 21/391 (5%)
Query: 376 VLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIG-----LKAHHSVNSVA----I 426
+LVC+PSN A+D++ ++ TG+R IR+ +I L H V + +
Sbjct: 220 ILVCSPSNVAIDQLAEKISRTGLRV--IRTCAKSREKIDSPVGFLTLHQQVRRLVEKEEL 277
Query: 427 DHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDV 486
L++ K + + + +L +A ++C T +G + L+ + F
Sbjct: 278 GKLLQVKEETGELSPVEENRFSSLKLKYERELLKKADVICCTCVAAGDSRLAAIK--FRA 335
Query: 487 VIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAG 546
V+IDE+ QA EP L+P+ TG +QV LVGD QL VI A G SLF+RL G
Sbjct: 336 VLIDESTQAKEPECLIPIVTGARQVVLVGDHCQLGPVVICEEAARAGLNRSLFERLVILG 395
Query: 547 YPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPF--SFFDIH 604
L+ QYRMHP + PS FY+ L++G E + ++R P FF
Sbjct: 396 NQPIRLQVQYRMHPLLSLLPSNLFYEGTLQNGV-TEQERILEAGDFRWPNPTVPMFFWCT 454
Query: 605 EGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFK 664
+E +P S++N E + + K + + + Q+ II+PY Q +
Sbjct: 455 LSQEEKPRSGKSFLNRAEAAHIEKIATKFLRSGVR---ADQIGIITPYEAQRAHIVKHML 511
Query: 665 ETFGVESQ--KVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKS 722
+ + ++ + +++ +VD QGREKD+ + SCVR++ IGFL D RR+NV +TRA+
Sbjct: 512 HSGPLNNKLYQEIEVASVDAFQGREKDIILLSCVRSNKDNKIGFLNDSRRLNVALTRARY 571
Query: 723 SILVVGCASTLREDKHWNNLVKSAEKQDCLF 753
+++VG L WN+L++ + CL
Sbjct: 572 GLIIVGNPKVLSHQPMWNSLLRFCRENHCLL 602
>gi|443895133|dbj|GAC72479.1| RNA helicase nonsense mRNA reducing factor [Pseudozyma antarctica
T-34]
Length = 1520
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 108/314 (34%), Positives = 160/314 (50%), Gaps = 39/314 (12%)
Query: 451 RDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQ 510
R SIR ILN A ++C + +GS L ++ VV DEA+ A EP +LVPL GC+
Sbjct: 1139 RASIRGEILNGADVICGSAIAAGSPELDMID--LPVVFFDEASMATEPVSLVPLMKGCRH 1196
Query: 511 VFLVGDPVQLPATVISPVAEHLGYGTSLFKRL------QRAGYPVKMLKTQYRMHPEVRS 564
+ ++GD QLP V S A+ G SLF+RL + P ML Q+RMHP +
Sbjct: 1197 LSIIGDHKQLPPVVTSAEAKQGGLSKSLFERLIESTAADGSKIPSTMLNVQFRMHPRLAE 1256
Query: 565 FPSREFYDEALEDGSDVEDYTT-----------RDWHEYRCFGPFSFFDIHEGKESQPAG 613
FP++ FY ALE+GS + +D CF D H+G+ES+
Sbjct: 1257 FPNKTFYSGALENGSGTDKIPAVESGYWPHVEGKDEAHRLCF-----ID-HKGRESKADN 1310
Query: 614 SGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQ-----------VKQFQER 662
S S N+ E + + ++ P+L + + I++PY Q + R
Sbjct: 1311 SLSLCNVAEARLAVDVAMDVLRRNPEL-TGDDIGIVTPYAGQQILLERMLHNDTSAERRR 1369
Query: 663 FKETFGVESQKV--VDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRA 720
G S ++ +D+ TVDG +GREK V +FS VR + + +GFLAD RR+NV +TRA
Sbjct: 1370 AAGALGARSSQLGCIDVHTVDGFEGREKKVILFSTVRTNAQGYVGFLADGRRLNVALTRA 1429
Query: 721 KSSILVVGCASTLR 734
+S++ V+G T +
Sbjct: 1430 QSALFVLGNIDTFK 1443
>gi|21717153|gb|AAM76346.1|AC074196_4 putative helicase [Oryza sativa Japonica Group]
gi|31433282|gb|AAP54820.1| tRNA-splicing endonuclease positive effector, putative, expressed
[Oryza sativa Japonica Group]
Length = 1361
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 110/336 (32%), Positives = 167/336 (49%), Gaps = 12/336 (3%)
Query: 450 DRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLA-TGC 508
+ SIR L A +V T S S + +++IDEAAQ E LVPL G
Sbjct: 575 NESSIRDLCLKRAKLVFCTASSSFELFRLQNVMPISILVIDEAAQLKECEALVPLLLPGI 634
Query: 509 KQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSR 568
+ + L+GD QL + V S +A+ +G SL++RL GY +L+ QYRMHP + FP+
Sbjct: 635 EHILLIGDENQLSSLVKSKIAKDADFGRSLYERLCTMGYRKHLLEVQYRMHPGINKFPNA 694
Query: 569 EFYDEALEDGSDV--EDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFV 626
FYD + DG V EDY + + +G +SF I E S N+ EV
Sbjct: 695 NFYDNRISDGPSVQQEDYM-KSYLPGPIYGAYSFIHIENDMEMLDELGQSSKNMVEVAVA 753
Query: 627 LLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGR 686
+ +L + + + L +ISPY QV QER + F V + ++DG QG
Sbjct: 754 TNIVERLAKECSEKRQRTSLGVISPYTAQVIALQERLGKQFKNHEFLSVTVKSIDGFQGG 813
Query: 687 EKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCAST-LREDKHWNNLVKS 745
E+D+ + S VR++ +GFL+D R+NV +TRAK + ++G +T L + W LV
Sbjct: 814 EEDIILISTVRSNKNGKVGFLSDAGRINVALTRAKYCLWILGNGATLLASNSIWAELVHD 873
Query: 746 AEKQDCLFRVSKPYASFFSDENLESMRKNATTDNVQ 781
++++ C F D+NL + +AT + Q
Sbjct: 874 SKRRGCFFNA-------LDDKNLAEIIMHATKEGEQ 902
>gi|222613192|gb|EEE51324.1| hypothetical protein OsJ_32291 [Oryza sativa Japonica Group]
Length = 1402
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 110/336 (32%), Positives = 167/336 (49%), Gaps = 12/336 (3%)
Query: 450 DRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLA-TGC 508
+ SIR L A +V T S S + +++IDEAAQ E LVPL G
Sbjct: 616 NESSIRDLCLKRAKLVFCTASSSFELFRLQNVMPISILVIDEAAQLKECEALVPLLLPGI 675
Query: 509 KQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSR 568
+ + L+GD QL + V S +A+ +G SL++RL GY +L+ QYRMHP + FP+
Sbjct: 676 EHILLIGDENQLSSLVKSKIAKDADFGRSLYERLCTMGYRKHLLEVQYRMHPGINKFPNA 735
Query: 569 EFYDEALEDGSDV--EDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFV 626
FYD + DG V EDY + + +G +SF I E S N+ EV
Sbjct: 736 NFYDNRISDGPSVQQEDYM-KSYLPGPIYGAYSFIHIENDMEMLDELGQSSKNMVEVAVA 794
Query: 627 LLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGR 686
+ +L + + + L +ISPY QV QER + F V + ++DG QG
Sbjct: 795 TNIVERLAKECSEKRQRTSLGVISPYTAQVIALQERLGKQFKNHEFLSVTVKSIDGFQGG 854
Query: 687 EKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCAST-LREDKHWNNLVKS 745
E+D+ + S VR++ +GFL+D R+NV +TRAK + ++G +T L + W LV
Sbjct: 855 EEDIILISTVRSNKNGKVGFLSDAGRINVALTRAKYCLWILGNGATLLASNSIWAELVHD 914
Query: 746 AEKQDCLFRVSKPYASFFSDENLESMRKNATTDNVQ 781
++++ C F D+NL + +AT + Q
Sbjct: 915 SKRRGCFFNA-------LDDKNLAEIIMHATKEGEQ 943
>gi|261402463|ref|YP_003246687.1| DNA helicase [Methanocaldococcus vulcanius M7]
gi|261369456|gb|ACX72205.1| DNA helicase [Methanocaldococcus vulcanius M7]
Length = 651
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 111/308 (36%), Positives = 172/308 (55%), Gaps = 34/308 (11%)
Query: 452 DSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQV 511
+ I + IL+EA +V ST S +GS +L + FDVV+IDE +QA+EP+ L+P+ G K +
Sbjct: 355 EKIINEILSEADVVVSTNSMAGSDVLK--DWEFDVVVIDEGSQAMEPSCLIPIVKGNK-L 411
Query: 512 FLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYP--VKMLKTQYRMHPEVRSFPSRE 569
+ GD QLP TV+S E+ +LF+RL + YP +L+ QYRM+ ++ FP+R
Sbjct: 412 IMAGDHKQLPPTVLS---ENKELKKTLFERLIKK-YPDFSSILEIQYRMNEKIMEFPNRM 467
Query: 570 FYDEALEDGSDVEDYTTRDWHEYRCFG----------PFSFFDIHEGKESQPAGSGSWIN 619
FYD L+ V++ T D + P F ++ EGKE + S S+ N
Sbjct: 468 FYDNKLKADESVKNITLLDLVKEEEIEETDKSIVNKIPVQFINV-EGKERRDKESYSYYN 526
Query: 620 IDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITT 679
I+E + V + KL LK +++I+PY QV+ + F+E + V++ T
Sbjct: 527 IEEAEQVFDIVKKL------LKYRIPISVITPYDAQVRYLRSMFEE-----NNIDVEVNT 575
Query: 680 VDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHW 739
VDG QGRE + + S VR GFL D RR+NV ITR K ++++G + L++DK +
Sbjct: 576 VDGFQGRENETIVISFVRTE---KFGFLKDLRRLNVAITRPKRKLVLIGNENLLKQDKIY 632
Query: 740 NNLVKSAE 747
N ++K A+
Sbjct: 633 NEMIKWAK 640
>gi|110637960|ref|YP_678167.1| DNA helicase [Cytophaga hutchinsonii ATCC 33406]
gi|110280641|gb|ABG58827.1| DNA helicase [Cytophaga hutchinsonii ATCC 33406]
Length = 611
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 140/421 (33%), Positives = 207/421 (49%), Gaps = 58/421 (13%)
Query: 355 PTTGNELK-PEVVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTP-KIVR 412
P TG E+V + RVLVCA SN+A+D + RL G+ +R P KI
Sbjct: 192 PGTGKTTTIVEIVKTLIEKGERVLVCASSNAAVDVLTERLAARGL--PVVRLGNPSKITE 249
Query: 413 IGLKAHHSVNSVAIDH----LVEQ--KRDDS---AADKQKHGATRKDRDSIRSAILNEA- 462
L+ + ++ ++H LV++ KR + A+K K R++R+ R AIL EA
Sbjct: 250 QNLQ--YCLDRQVVNHEQFGLVKELKKRAEEFFRMANKYKRNFDREEREQ-RKAILKEAR 306
Query: 463 ----------------------VIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPAT 500
V+ C+ + S + K FD +I DE+ Q +EP
Sbjct: 307 NLRGQADDHLHFLQQNVLVKNQVVTCTPV-VSMHREIGK--EKFDTLIFDESGQTMEPMC 363
Query: 501 LVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHP 560
+P+ K+V L GD +QLP TV S A G SL ++L +ML QYRM+
Sbjct: 364 WIPIQK-VKKVILAGDHLQLPPTVKSDEAAKKGLAISLLEKLMPLPGISEMLAIQYRMNE 422
Query: 561 EVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIH-EGKESQPAGSGSWI- 618
++ FPS+ FYD LE V+D+ D F D G E + G+ I
Sbjct: 423 KIMQFPSQWFYDNKLEAHGSVKDHAFDD-------DVIQFIDTAGTGYEEELVGAPFGIR 475
Query: 619 NIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDIT 678
N E D VL + + + +L + + IISPY+ Q++ +E+ E + K + +
Sbjct: 476 NKQEADLVLAILNNV----AELNKQASIGIISPYKLQIQYIREQLIEQ--KITSKNIQVQ 529
Query: 679 TVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKH 738
TVDG QG+EKD+ I S VR++ K+ IGFL D RRMNV ITRA+ ++V+G +STL K
Sbjct: 530 TVDGFQGQEKDIIIISLVRSNGKQEIGFLKDLRRMNVAITRARKKLIVIGDSSTLSSSKF 589
Query: 739 W 739
+
Sbjct: 590 Y 590
>gi|115483164|ref|NP_001065175.1| Os10g0537600 [Oryza sativa Japonica Group]
gi|113639784|dbj|BAF27089.1| Os10g0537600, partial [Oryza sativa Japonica Group]
Length = 985
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 110/336 (32%), Positives = 167/336 (49%), Gaps = 12/336 (3%)
Query: 450 DRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLA-TGC 508
+ SIR L A +V T S S + +++IDEAAQ E LVPL G
Sbjct: 199 NESSIRDLCLKRAKLVFCTASSSFELFRLQNVMPISILVIDEAAQLKECEALVPLLLPGI 258
Query: 509 KQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSR 568
+ + L+GD QL + V S +A+ +G SL++RL GY +L+ QYRMHP + FP+
Sbjct: 259 EHILLIGDENQLSSLVKSKIAKDADFGRSLYERLCTMGYRKHLLEVQYRMHPGINKFPNA 318
Query: 569 EFYDEALEDGSDV--EDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFV 626
FYD + DG V EDY + + +G +SF I E S N+ EV
Sbjct: 319 NFYDNRISDGPSVQQEDYM-KSYLPGPIYGAYSFIHIENDMEMLDELGQSSKNMVEVAVA 377
Query: 627 LLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGR 686
+ +L + + + L +ISPY QV QER + F V + ++DG QG
Sbjct: 378 TNIVERLAKECSEKRQRTSLGVISPYTAQVIALQERLGKQFKNHEFLSVTVKSIDGFQGG 437
Query: 687 EKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCAST-LREDKHWNNLVKS 745
E+D+ + S VR++ +GFL+D R+NV +TRAK + ++G +T L + W LV
Sbjct: 438 EEDIILISTVRSNKNGKVGFLSDAGRINVALTRAKYCLWILGNGATLLASNSIWAELVHD 497
Query: 746 AEKQDCLFRVSKPYASFFSDENLESMRKNATTDNVQ 781
++++ C F D+NL + +AT + Q
Sbjct: 498 SKRRGCFFNA-------LDDKNLAEIIMHATKEGEQ 526
>gi|218184942|gb|EEC67369.1| hypothetical protein OsI_34480 [Oryza sativa Indica Group]
Length = 1437
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 110/336 (32%), Positives = 167/336 (49%), Gaps = 12/336 (3%)
Query: 450 DRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLA-TGC 508
+ SIR L A +V T S S + +++IDEAAQ E LVPL G
Sbjct: 651 NESSIRDLCLKRAKLVFCTASSSFELFRLQNVMPISILVIDEAAQLKECEALVPLLLPGI 710
Query: 509 KQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSR 568
+ + L+GD QL + V S +A+ +G SL++RL GY +L+ QYRMHP + FP+
Sbjct: 711 EHILLIGDENQLSSLVKSKIAKDADFGRSLYERLCTMGYRKHLLEVQYRMHPGINKFPNA 770
Query: 569 EFYDEALEDGSDV--EDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFV 626
FYD + DG V EDY + + +G +SF I E S N+ EV
Sbjct: 771 NFYDNRISDGPSVQQEDYM-KSYLPGPIYGAYSFIHIENDMEMLDELGQSSKNMVEVAVA 829
Query: 627 LLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGR 686
+ +L + + + L +ISPY QV QER + F V + ++DG QG
Sbjct: 830 TNIVERLAKECSEKRQRTSLGVISPYTAQVIALQERLGKQFKNHEFLSVTVKSIDGFQGG 889
Query: 687 EKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCAST-LREDKHWNNLVKS 745
E+D+ + S VR++ +GFL+D R+NV +TRAK + ++G +T L + W LV
Sbjct: 890 EEDIILISTVRSNKNGKVGFLSDAGRINVALTRAKYCLWILGNGATLLASNSIWAELVHD 949
Query: 746 AEKQDCLFRVSKPYASFFSDENLESMRKNATTDNVQ 781
++++ C F D+NL + +AT + Q
Sbjct: 950 SKRRGCFFNA-------LDDKNLAEIIMHATKEGEQ 978
>gi|325104103|ref|YP_004273757.1| ATPase AAA [Pedobacter saltans DSM 12145]
gi|324972951|gb|ADY51935.1| AAA ATPase [Pedobacter saltans DSM 12145]
Length = 629
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 125/414 (30%), Positives = 206/414 (49%), Gaps = 61/414 (14%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIG--LKAHHSVNSVAIDHLVEQ 432
++LV APSN+A+D + L+L G+ ++RIG ++ + + +D+ + Q
Sbjct: 224 QILVTAPSNTAVDLLTLKLAEKGV----------NVIRIGNPIRVSQKLEELTLDYKINQ 273
Query: 433 KRDD--------------SAADKQKHGATRKDRDSIRSAILNEA----VIVCSTLSFSGS 474
+ + + A K K + +R+ R A+ +EA V T SF
Sbjct: 274 HQYNKEIKQLKKQAAEYRNMAHKYKRSFGKLEREQ-RKALFDEAHKLLKQVEQTESFISE 332
Query: 475 ALLSKL----------------NHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPV 518
LL+K + +D+V+IDEAAQA+EPA +P+ K +F GD +
Sbjct: 333 DLLNKAQVITATLVGVNNYAIKDRDYDIVVIDEAAQALEPACWIPVLRSRKVIF-AGDHL 391
Query: 519 QLPATVISPVAEHLGYGTSLFKRLQRAGY---PVKMLKTQYRMHPEVRSFPSREFYDEAL 575
QLP TV S AE LG ++L ++ G+ V +L TQYRM+ E+ +PS E Y+ L
Sbjct: 392 QLPPTVKSKEAEKLGLSSTLLEK--NMGFHPEAVSLLTTQYRMNKEINDYPSIELYESKL 449
Query: 576 EDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLIS 635
V TR + P F D + S N +E +F L L+
Sbjct: 450 HADRSV---ATRKLDQKDI--PVEFVDTAGCSFDEKINGTSVYNPEEANFTLKHLTGLLQ 504
Query: 636 MYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVES-QKVVDITTVDGCQGREKDVAIFS 694
+ + K S +A+ISPY+ QV+ +E ++ ++ +DI T+D QG+E+D+ S
Sbjct: 505 NHNKAKYS--VAVISPYKQQVELLKELIEDWEDLKPFLAQIDINTIDSFQGQERDIVYIS 562
Query: 695 CVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEK 748
R++ + +IGFL+D RRMNV ITRA+ ++V+G + TL ++ +++ + EK
Sbjct: 563 LTRSNSENAIGFLSDIRRMNVAITRARMKLVVIGDSGTLSKNAFYSDFISYTEK 616
Score = 40.0 bits (92), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%)
Query: 252 YIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAI 296
YI N SQ +A++ L + ++ GPPGTGKT T++ +SA+
Sbjct: 173 YISSRLNDSQNQAVNSILAAQELAILHGPPGTGKTTTLVEAISAL 217
>gi|71003407|ref|XP_756384.1| hypothetical protein UM00237.1 [Ustilago maydis 521]
gi|46095821|gb|EAK81054.1| hypothetical protein UM00237.1 [Ustilago maydis 521]
Length = 1088
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 123/406 (30%), Positives = 203/406 (50%), Gaps = 59/406 (14%)
Query: 376 VLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVN------------- 422
VLVCAPSN A+D++ ++ TG+ K+VR+ K+ +++
Sbjct: 526 VLVCAPSNVAVDQLTEKIHLTGL----------KVVRLTAKSREALDGPISFLTLHEQVA 575
Query: 423 ----SVAIDHLVEQKRDD---SAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSA 475
++ + L++ K + S++D++K+ A + + IL+ A ++C T G
Sbjct: 576 NNDTNIELQKLIQLKNEQGELSSSDERKYKALTR---ACEKEILSTADVICCTCVGCGDP 632
Query: 476 LLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYG 535
LSK+ F V++DEA QA EP ++PL V VGD +QL +++ G
Sbjct: 633 RLSKIK--FRTVLVDEATQAAEPECMIPL------VVFVGDHLQLGPVIMNKKVARAGAS 684
Query: 536 TSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRD----WHE 591
SLF+RL G L+ QYRMHP + FPS FY+ L++G + +D W
Sbjct: 685 QSLFERLIMLGNRPIRLQVQYRMHPCLSEFPSNMFYEGTLQNGVTAPERLRKDVDFPWPV 744
Query: 592 YRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLK-SSSQLAIIS 650
P FF + G+E + S++N E V K+++ + + SQ+ I++
Sbjct: 745 PSL--PMLFFQ-NLGQEEISSSGTSFLNRTEAANV----EKIVTRFFKAGVKPSQIGIVT 797
Query: 651 PYRHQ----VKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGF 706
PY Q V Q + E K V++ +VD QGREKD I SCVR+++ + IGF
Sbjct: 798 PYEGQRSYIVNHMQ--LHGSLKKELYKDVEVASVDAFQGREKDYIILSCVRSNEHQGIGF 855
Query: 707 LADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCL 752
L+D RR+NV +TRA+ ++++G L + W+ L+ +++ CL
Sbjct: 856 LSDPRRLNVALTRARFGLVILGNPKVLNKHPLWHYLLVHYKEKGCL 901
>gi|428172694|gb|EKX41601.1| hypothetical protein GUITHDRAFT_74611, partial [Guillardia theta
CCMP2712]
Length = 309
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 106/309 (34%), Positives = 167/309 (54%), Gaps = 20/309 (6%)
Query: 439 ADKQKHGATRKDRDS---IRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQA 495
A++QK R++RD IR IL+ A ++C+ + +G L + FD +++DE AQ
Sbjct: 8 AERQKR-KERQERDQDNFIRDEILDNAEVICAQMITAGGDFLFRQLGSFDAILVDEVAQC 66
Query: 496 VEPATLVPLAT-GCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKT 554
E T+VP+ GC ++ L GD QLP TV S AE G SL+ RL R G K L T
Sbjct: 67 TEINTIVPIVQRGCSRLVLSGDHCQLPPTVQSEEAEERGMSVSLYARLVREGLEAKFLDT 126
Query: 555 QYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEY-RCFGPFSFFDIHEGKESQPAG 613
Q+R HP++ F S+ YD L+DG E+ + R P +F D+ G Q G
Sbjct: 127 QFRSHPKLMEFSSKMVYDGRLKDGIRGEERPALQGFVWPRRDVPVAFVDMGRGYHEQQQG 186
Query: 614 SGSWINIDEVDF---VLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERF-----KE 665
S N EV+ VL++ + ++ P+ + +++PY QV+ + + +E
Sbjct: 187 E-SKANPKEVEKLLQVLIMVLRKKNLRPR-----DVGVVTPYMAQVRLLKRSWHSLCARE 240
Query: 666 TFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSIL 725
+ ++I +VD QGREK++ +FS VR++ + +GFL D+RR+NV +TRA+ ++
Sbjct: 241 NLDQAEARELEIASVDNFQGREKELILFSAVRSNQRGMVGFLRDWRRLNVMLTRARRGLI 300
Query: 726 VVGCASTLR 734
V G + TLR
Sbjct: 301 VFGSSHTLR 309
>gi|428672356|gb|EKX73270.1| conserved hypothetical protein [Babesia equi]
Length = 1113
Score = 167 bits (424), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 131/414 (31%), Positives = 203/414 (49%), Gaps = 41/414 (9%)
Query: 342 DNIMPIDGDDGFFPTTGNELKPEVVNSSRRY--RVRVLVCAPSNSALDEIVLRLLNTGIR 399
+NI I G G T + +++S RR + R+L + SN A D ++ L GI
Sbjct: 679 NNITLIQGPPG---TGKTHVACAIIDSWRRLHPQERILAVSDSNVAADTLIEALSACGI- 734
Query: 400 DENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQKRDDSAADKQKHGATRKDRDSIRSAIL 459
+RIG + + + I L + K K+ K+ +S+R+ +
Sbjct: 735 ---------PALRIGSGSEYDLQEEGIKDLSRYQAYLYLKSKHKY----KEANSLRTVLF 781
Query: 460 NEAV----IVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVG 515
EA+ I+ +T SGS LL L F VI+DE AQ++EPA LV + GCK + L+G
Sbjct: 782 MEAIKNNKIIIATCIGSGSDLLDNLQFSF--VIVDECAQSIEPANLVSIGRGCKSLVLIG 839
Query: 516 DPVQLPATVISPVAEHLGYGTSLFKRLQRAGY-PVKMLKTQYRMHPEVRSFPSREFYDEA 574
D QL T+IS G SL +RL P+ +L +Q RMHP + F + FY+
Sbjct: 840 DHKQLRPTIISNTVARSGLSKSLLERLVDENVVPICLLNSQRRMHPTIAEFSNLHFYNGM 899
Query: 575 LEDGSDVEDYTTRDWHEYR--------CFGPFSFFDIHEGKESQPAGSGSWINIDEVDFV 626
L++ DV+D ++ CF S + E+ P G+ + N EV+ V
Sbjct: 900 LQN-EDVDDINRPQIAGFKWPVAGYNLCFVDISTGTPYNNFET-PYGTSKY-NQVEVNCV 956
Query: 627 LLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGR 686
+ + ++ Q+ I++PY Q Q + G+ + K + I +VDG QG+
Sbjct: 957 ISILRSFLAAGD--IEERQIGILTPYDAQKNVLQNQVNLIQGINA-KAISIDSVDGFQGK 1013
Query: 687 EKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLRED-KHW 739
EKD+ IFS VR++ K IGFL D RRMNV +TRA+ ++++G TL D ++W
Sbjct: 1014 EKDLIIFSAVRSNLNKDIGFLRDPRRMNVMLTRARRGLIIIGDLFTLSNDFENW 1067
>gi|70936507|ref|XP_739189.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56515997|emb|CAH74375.1| hypothetical protein PC000066.00.0 [Plasmodium chabaudi chabaudi]
Length = 418
Score = 167 bits (424), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 116/391 (29%), Positives = 196/391 (50%), Gaps = 27/391 (6%)
Query: 441 KQKHGATRKDRDSIRSAILNEAV----IVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAV 496
K + +K+ +++ + EAV +V +T SG + N F+ VIIDE AQ++
Sbjct: 11 KLRKNNMQKEAKVMKALLFLEAVKKYNVVIATCVGSGHEIFD--NEKFERVIIDECAQSI 68
Query: 497 EPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGY-PVKMLKTQ 555
EP+ L+PL C + L+GD QLP T+ISP A LG SL +R A P+ +L TQ
Sbjct: 69 EPSNLIPLGHYCTNLVLIGDHKQLPPTIISPDAIKLGLDKSLLERFVMAKIAPIHLLSTQ 128
Query: 556 YRMHPEVRSFPSREFYDEALEDGSDVED----YTTRDWHEYRCFGPFSFFDIHEGK---E 608
RMH + +FP+ FYD L+ + E+ W +C F D+ GK +
Sbjct: 129 RRMHLSICTFPNFHFYDNKLKTANVTEENRPIIKGFLWPNPKC--RLVFIDVSLGKPGSK 186
Query: 609 SQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFG 668
+ A S N+ E++ ++ + +++ S ++ I++ Y Q + ++ +E F
Sbjct: 187 FENAYGTSKFNLYEIEPLIAVLKSIVN--EGCVSVDEIGILTAYDAQKIKLKKAVQEAFP 244
Query: 669 VESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVG 728
E+ ++I ++DG QG+EKD+ +FS VR++ +GFL D RR+NV +TRAK +++ G
Sbjct: 245 YEAAHRIEIDSIDGFQGKEKDLILFSAVRSNANNELGFLRDARRLNVMLTRAKRGVIIFG 304
Query: 729 CASTLRED-KHWNNLVKSAEKQDCLFRVSK-----PYASFFSDENLESMRKNATTDNVQG 782
TL D +W +K + + ++K A + + L + K+ NV
Sbjct: 305 DQFTLANDPANWLPWLKWISSKRAIVHITKLNEHLDSADYSLLDKLNKINKSVNLKNVNV 364
Query: 783 ADGHVPHDDETMHYANTGDADQGQADDIDNA 813
+D + + D+T + D D + DNA
Sbjct: 365 SDNYYFYGDDT---GFSNDYDPKYVQNTDNA 392
>gi|198435823|ref|XP_002122130.1| PREDICTED: similar to regulator of nonsense transcripts 1 [Ciona
intestinalis]
Length = 1094
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 117/365 (32%), Positives = 192/365 (52%), Gaps = 31/365 (8%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIG---LKAHHSVNSV------- 424
+VLVCAPSN A+D++ ++ TG++ + + + + + L H+ V S+
Sbjct: 507 QVLVCAPSNIAVDQLTEKIHRTGLKVVRLCAKSREAIDSNVSFLSLHNQVRSMESLPELQ 566
Query: 425 AIDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGF 484
+ L ++ + S+ D++++ A +++ + +L A ++CST +G L + F
Sbjct: 567 KLQQLKDETGELSSNDEKRYRALKRNAER---ELLQHADVICSTCVGAGDPRLVRFR--F 621
Query: 485 DVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQR 544
++IDE+ QA EP +VP+ G +Q+ LVGD QL V+ A + G SLF+RL
Sbjct: 622 RSILIDESTQATEPECMVPVVLGAQQLILVGDHCQLGPVVMCKKAANAGLAQSLFERLVV 681
Query: 545 AGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFS--FFD 602
G L+ QYRMHP + +FPS FY+ +L++G + ++ + P FF
Sbjct: 682 LGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAGERMRKNL-SFVWPSPDKPMFFY 740
Query: 603 IHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSS---SQLAIISPYRHQVKQF 659
G+E + S++N E V + K LKS Q+ II+PY Q + +
Sbjct: 741 KTSGQEEIASSGTSYLNRTEAAVVERITTKF------LKSGIKPEQIGIITPYEGQ-RSY 793
Query: 660 QERFKETFGVESQKV---VDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVG 716
++ + G K+ V+I +VD QGREKD I SCVRA++ + IGFL D RR+NV
Sbjct: 794 LVQYMQYSGSLHSKLYMEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVA 853
Query: 717 ITRAK 721
+TRA+
Sbjct: 854 LTRAR 858
>gi|414867534|tpg|DAA46091.1| TPA: hypothetical protein ZEAMMB73_362679 [Zea mays]
Length = 1444
Score = 167 bits (422), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 103/305 (33%), Positives = 159/305 (52%), Gaps = 5/305 (1%)
Query: 453 SIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLA-TGCKQV 511
SIR L A ++ T S S + +++IDEAAQ E +LVPL G + V
Sbjct: 631 SIRDLCLKHAKLIFCTASSSFELFRLQSVRPISILVIDEAAQLKECESLVPLLLQGIEHV 690
Query: 512 FLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFY 571
L+GD QL + V S +A+ +G SL++RL GY +L+ QYRMHP + FP+ FY
Sbjct: 691 LLIGDENQLSSLVKSKIAKDADFGRSLYQRLCTMGYSKHLLEVQYRMHPSISKFPNSNFY 750
Query: 572 DEALEDGSDV--EDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLL 629
D + DG V EDY + + +G +SF I E + S N+ EV +
Sbjct: 751 DNRISDGPIVRQEDYA-KSYLPGPIYGAYSFIHIDNDMEMLDSLGQSSKNMAEVAVAANI 809
Query: 630 FHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKD 689
+L + + + + IISPY QV Q+R F V + ++DG QG E+D
Sbjct: 810 VERLAKECTEKRQRTSVGIISPYTAQVIALQDRLGRKFEKHDFLSVTVKSIDGFQGGEED 869
Query: 690 VAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCAST-LREDKHWNNLVKSAEK 748
+ + S VR++ +GFL+D R+NV +TRAK + ++G +T L + W +LV+ +++
Sbjct: 870 IILISTVRSNKDGKVGFLSDSGRINVALTRAKYCLWILGNGTTLLASNSIWADLVRDSKR 929
Query: 749 QDCLF 753
+ C F
Sbjct: 930 RRCFF 934
>gi|312071929|ref|XP_003138834.1| nonsense mRNA reducing factor 1 NORF1 [Loa loa]
Length = 1141
Score = 167 bits (422), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 127/434 (29%), Positives = 206/434 (47%), Gaps = 78/434 (17%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNS----------- 423
+VLVCAPSN A+D++ ++ TG+ K+VR+ K+ +++S
Sbjct: 503 QVLVCAPSNIAVDQLAEKIHRTGL----------KVVRLCAKSRETLDSPVAFLALHNQL 552
Query: 424 -----VAIDHLVEQKRDD----SAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGS 474
A H ++Q +++ + AD+++ A R ++ +L A ++C T +
Sbjct: 553 KALHGAAELHKLQQLKEEIGELADADERRFRALRIAKEC---QLLAAADVICCTCVSAAD 609
Query: 475 ALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGY 534
+ LS + V+IDE+ QA EP +V + G +Q+ LVGD QL ++ A G
Sbjct: 610 SRLSHMR--IKCVLIDESTQATEPEVMVAVVCGVRQLVLVGDHCQLGPVIMCKKAAKAGL 667
Query: 535 GTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDG--SDVEDYTTRDWHEY 592
SLF+RL G L+ QYRMHP + SFPS FY+ +L++G DW
Sbjct: 668 SQSLFERLVLLGNRPIRLQVQYRMHPALSSFPSNVFYEGSLQNGVTEGERQLIGIDWQWP 727
Query: 593 RCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLI--SMYPQLKSSSQLAIIS 650
P F+ + G+E + S++N E V L + + + P+ Q+ II+
Sbjct: 728 VPDKPMMFWSCY-GQEELSSSGTSFLNRTEAANVEKLATRFLKAGIKPE-----QIGIIT 781
Query: 651 PYRHQVKQFQERFKETFGVESQKV---VDITTVDGCQ----------------------- 684
PY Q + + +F +T G K+ +++ VD Q
Sbjct: 782 PYEGQ-RSYIVQFMQTQGALHSKLYLEMEVANVDAFQSYQQVGYSTETSRTLPLKVIGRS 840
Query: 685 ------GREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKH 738
GREKD+ I +CVR++D + IGFL D RR+NV +TRAK +++VG A L
Sbjct: 841 MRFLHTGREKDIIIVTCVRSNDHQGIGFLNDSRRLNVALTRAKFGLIIVGNAKVLSRHPL 900
Query: 739 WNNLVKSAEKQDCL 752
WN L+ +++ CL
Sbjct: 901 WNYLLSVFKEKGCL 914
>gi|413919137|gb|AFW59069.1| hypothetical protein ZEAMMB73_371687 [Zea mays]
Length = 968
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 106/313 (33%), Positives = 162/313 (51%), Gaps = 8/313 (2%)
Query: 451 RDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLAT-GCK 509
+ +IR + A IV T+S S N + +++DEAAQ E TL+PL K
Sbjct: 529 KPTIRDFCIKSASIVFCTVSSSTKI---TANKKVEFLVVDEAAQLKECETLIPLRLWTLK 585
Query: 510 QVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSRE 569
L+GD QLPATV S V +G SLF+RL G+ +L QYRMHP + FP+
Sbjct: 586 HAVLIGDECQLPATVKSKVCTDALFGRSLFERLSSLGHEKHLLNMQYRMHPSISIFPNTS 645
Query: 570 FYDEALEDGSDV-EDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLL 628
FY+ + D ++V E R + FGP+SF +I +G+E + S N E +
Sbjct: 646 FYEGRISDATNVMEKEHRRMYLPGSMFGPYSFINIEDGREERDELGHSKRNFVEAAVIEE 705
Query: 629 LFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREK 688
+ ++L + K + +I PY QV Q + ++ Q V +VDG QG E+
Sbjct: 706 ILYRLRRACFKTKRKVTVGVICPYNAQVVAIQGKIEKMRFDPLQ--VKTNSVDGFQGGEE 763
Query: 689 DVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKH-WNNLVKSAE 747
D+ I S VR++ +GFL++ +R NV +TRA+ + ++G A+TL W++LV+ A+
Sbjct: 764 DIIILSTVRSNSVGKVGFLSNAQRANVCLTRARHCLWILGNATTLASSGSIWSDLVRDAK 823
Query: 748 KQDCLFRVSKPYA 760
+ C F S Y
Sbjct: 824 DRRCFFNASSDYV 836
>gi|359473525|ref|XP_003631315.1| PREDICTED: uncharacterized protein LOC100265010 [Vitis vinifera]
Length = 2792
Score = 166 bits (421), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 101/307 (32%), Positives = 161/307 (52%), Gaps = 8/307 (2%)
Query: 454 IRSAILNEAVIVCSTLSFSGSALLSKLNHG----FDVVIIDEAAQAVEPATLVPLAT-GC 508
+ ++ E ++L F ++ KL+ D+++IDEAAQ E + +PL G
Sbjct: 552 MNEGLIKEFCFKMASLIFCTASSSYKLHSANMKPLDLLVIDEAAQLKECESTIPLQLPGI 611
Query: 509 KQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSR 568
+ L+GD QLPA V S V++ G+G SLF+RL G+ +L QYRMHP + FP+
Sbjct: 612 RHAILIGDECQLPAMVSSKVSKEAGFGRSLFERLSSLGHFKHLLNVQYRMHPSISFFPNS 671
Query: 569 EFYDEALEDGSDVEDYT-TRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVL 627
+FY + D +V+ + T+ + FG +SF ++ GKE S N+ EV V+
Sbjct: 672 KFYFNQILDAPNVKSKSYTKHYLSGPMFGSYSFINVR-GKEEHDDVGKSRKNMIEVAIVI 730
Query: 628 LLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGRE 687
+ L + + +ISPY QV Q++ + + V + TVDG QG E
Sbjct: 731 KIVRNLYKEWSGSNQKLSIGVISPYAAQVVAIQDKLGQKYEKLGNFSVKVKTVDGFQGGE 790
Query: 688 KDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKH-WNNLVKSA 746
+D+ I VR++ SIGFL++ +R NV +TRA+ + ++G TL + W +LV A
Sbjct: 791 EDIIIICTVRSNTGGSIGFLSNPQRTNVALTRARYCLWILGNERTLANSESIWEDLVLDA 850
Query: 747 EKQDCLF 753
+K+ C F
Sbjct: 851 KKRKCFF 857
>gi|46133873|ref|XP_389252.1| hypothetical protein FG09076.1 [Gibberella zeae PH-1]
Length = 1721
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 112/381 (29%), Positives = 190/381 (49%), Gaps = 41/381 (10%)
Query: 373 RVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQ 432
+ RVLV AP+++A+D ++ R + R P ++R+ + H + + +
Sbjct: 1325 KARVLVTAPTHNAVDNVMRRYIKQIQEQPLARKVQPNVLRVSTEVHK------VSDDLRK 1378
Query: 433 KRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEA 492
D+ A ++ HG + + + + ++ ++ V +T +G LL + FD+VI+DEA
Sbjct: 1379 YTCDAMAGQEIHGDYKAMKKA--TQMIKDSDTVFTTCIGAGIGLLR--SEFFDIVIVDEA 1434
Query: 493 AQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRL-------QRA 545
+Q EP++LVPL GC + LVGD VQL TV + L + SLF+RL +
Sbjct: 1435 SQQTEPSSLVPLVKGCSKAILVGDHVQLRPTV-QQTSLALDFDVSLFERLYTEAGGSTES 1493
Query: 546 GYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHE 605
G+ ML TQYRMHP++ F S FY+ L+ G + D R + P +
Sbjct: 1494 GFNTMMLDTQYRMHPKLCEFSSGAFYEGKLKSGIGISD---RPLIKSEFPFPLAVLTKQS 1550
Query: 606 GKESQPAGSGS-WINIDEVDF----------VLLLFHKLISMYPQLKSSSQLAIISPYRH 654
G + + ++N D + L H + + + + +++PY
Sbjct: 1551 GDSGKTDYERAIFVNCDTKEIQGKSKENKGQAELCLH-ICKLLTSQNDTQSIVVLTPYTR 1609
Query: 655 QVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMN 714
Q + + T ++++++DG QGRE DV +F VR ++ +SIGFL D RRMN
Sbjct: 1610 QAESLKRMLPST--------IEVSSIDGFQGREADVIVFVTVRCNEHRSIGFLKDMRRMN 1661
Query: 715 VGITRAKSSILVVGCASTLRE 735
V +TRA+S+++V+G +TL E
Sbjct: 1662 VALTRARSAVIVIGHRATLTE 1682
>gi|321478114|gb|EFX89072.1| hypothetical protein DAPPUDRAFT_310816 [Daphnia pulex]
Length = 1238
Score = 166 bits (420), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 196/773 (25%), Positives = 325/773 (42%), Gaps = 107/773 (13%)
Query: 40 NSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKAQIIQKKDEEEVQEWKLR---- 95
NSK + KL L V Y ++DY + F PL+ EV A + + +V KL+
Sbjct: 400 NSKSL--PKLSLLPVVSDYATLEDYCSIFTPLMLHEVWAGLCK-----DVHTSKLKTLET 452
Query: 96 LVMECGEADGFHLPSVTYEADEVESISPNDLLLLSKEEFKEGS-TFPTTYAFALVEHCQA 154
L+ +D F L + E++SP + + S P FA+ E +
Sbjct: 453 LIYSKTISDDFALL-------QCEALSPTRIFEMELVSLTVASPQKPPVEIFAVAEQVRY 505
Query: 155 NLLRLRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSAVEKRLFSLKICSLSTIAREYL 214
R R + ++ I + N+ + + + + KI L T ++++
Sbjct: 506 WWKRERGEIDPRLLAICQRPNIPITSFNLRIKMYHVLPQLNQVFTVTKITRLKTAMKQFI 565
Query: 215 ALRSVGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIKENH---NASQLEAI------ 265
+ P + I+ S+ + L +ENH NASQ +A+
Sbjct: 566 LNAELARSPLCNAIIQPSDHVDAFK---------LETVNQENHTVLNASQFKAVESIAQT 616
Query: 266 --HEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLREIKRGPELPMHE 323
+ + L+ GPPGTGK++ + ++ ++ + H K G + P + +
Sbjct: 617 VVYSSDKQPKISLVHGPPGTGKSRVTVEMILRMM----SLYHKKTG-----KQPRILVCA 667
Query: 324 KYNHW--GRASPWLVGANPRDNIMPIDGDDGFFPTTGN----ELKPEVVNSSRRYRVRVL 377
NH A+ + + I+ I + P N L ++ + R+
Sbjct: 668 PSNHAIDELATRLMDARDWGSRIVRIGVSESMRPEVRNISLDNLTRKIQQDAPTTRI--- 724
Query: 378 VCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQ----- 432
+P + L + L + +N+ + + L ++ + LV Q
Sbjct: 725 --SPESRKLGMLSRELNFLQQKKDNLVAAIRLATELELLDEARMHDRKLQQLVVQIDQVG 782
Query: 433 -KRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKL------NHGFD 485
R + + + T K+R R ++L A I+CST++ S + L ++ F
Sbjct: 783 RCRQECYENHVNYFHTEKERFETRRSLLFNAQIICSTINSCRSEEMENLFLEETPDNRFL 842
Query: 486 VVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRA 545
IIDEA+Q EP +L PLA G ++ L+GDP QLPATV+S A+ + SLF RL +
Sbjct: 843 CCIIDEASQCTEPESLTPLAFGISKLVLIGDPDQLPATVMSTFAQKKRFDQSLFNRLHAS 902
Query: 546 GYPVK-------MLKTQYRMHPEVRSFPSREFYD------EALEDGSDVEDYTTRDWHEY 592
V ML TQYRM + +PSR FY E L+ DY
Sbjct: 903 RLLVNQESEGVIMLNTQYRMASSICEWPSRYFYGGKIVTAEGLKRNGPCYDY-------- 954
Query: 593 RCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPY 652
D+ +G E S+ N E V+ KLI P L + +I+ Y
Sbjct: 955 ------RVLDVTDGIEQ--LEEQSFKNEKEA-VVVANIVKLILNSP-LTVGKSVGVITFY 1004
Query: 653 RHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKK---SIGFLAD 709
+ Q K E+ +E G + K +D+ TVD QGRE D+ + SCVRA K SIGF+
Sbjct: 1005 QSQKKCISEKLREV-GCRASK-IDLNTVDSFQGRETDIVVISCVRAQQLKKLDSIGFIRS 1062
Query: 710 YRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRVSKPYASF 762
+ MNV +TRAK S+++ G TL++++ +L+ +A ++ VS +S+
Sbjct: 1063 LQWMNVAMTRAKESLILCGHFETLQKNETCQDLINNARSRNLAHVVSSNSSSY 1115
>gi|268566961|ref|XP_002639857.1| Hypothetical protein CBG12210 [Caenorhabditis briggsae]
Length = 615
Score = 166 bits (419), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 132/441 (29%), Positives = 217/441 (49%), Gaps = 47/441 (10%)
Query: 339 NPRDNIMPIDGDDGFFPTTGNELKPEVVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGI 398
NP+ N++ I G G T + E+V+ + + RVL+CAP++ A+ + +
Sbjct: 168 NPQRNLLCIQGPPG---TGKTRVIAEIVHQLLKKKKRVLICAPTHVAVQNAM-----DAV 219
Query: 399 RDENIRSYTPKIVRIGLKAHHSVNSVAIDH----LVEQKRDDSAADKQKHGATR------ 448
R + P+ V+ L ++ DH +E + QK +T+
Sbjct: 220 RRRMCQDIPPETVQKELCILNNTRDEFQDHPSTAKLETMEKELMRSNQKGQSTKLMAYEC 279
Query: 449 -KDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATG 507
K R SI +I + STL S L + + DV+I+DEAAQ EP+T VP T
Sbjct: 280 MKLRCSIYQSIYAPRRAIFSTLGTSSIQKLPEYDWKADVMIVDEAAQCTEPSTWVPALTT 339
Query: 508 --CKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRL--QRAGYPVK-MLKTQYRMHPEV 562
CK++ LVGD QLPA V+S A +G SL ++L + A + +L QYRM+ ++
Sbjct: 340 PTCKKLVLVGDQKQLPAIVLSDKAVRANFGMSLMEKLAEEFAKNNINILLNEQYRMNEKI 399
Query: 563 RSFPSREFYDEALEDGSDVEDYTTRDWH-----EYRCFGPFSFFDIH--EGKESQPAGSG 615
+ + FY+ L S V D T RD + Y P D+ E + + S
Sbjct: 400 MHWSNEHFYNNQLTAHSSVSDITLRDIYPKIPTNYIANKPIFMIDMKNFEDRSQESFDSN 459
Query: 616 SWINIDEVDFVLLLFHKLIS---MYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQ 672
S+ N E++ V +L++ + P+ +A+I+PY Q+ E+ + +
Sbjct: 460 SYSNTGELNVVSNYVIRLVTDVGVNPK-----DIAVIAPYYSQI----EKLRNSISFR-- 508
Query: 673 KVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCAST 732
VD+ TVD QG+E++V IF VR +D+ SIGFL + RR+NV ITRAK ++VG +
Sbjct: 509 --VDVNTVDAFQGQEREVIIFCLVRDNDEGSIGFLKETRRLNVAITRAKRQFVLVGNSDM 566
Query: 733 LREDKHWNNLVKSAEKQDCLF 753
L+ ++H +L + + ++ ++
Sbjct: 567 LQRNRHIKSLYRYLKSENVIY 587
>gi|297738288|emb|CBI27489.3| unnamed protein product [Vitis vinifera]
Length = 2562
Score = 166 bits (419), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 101/307 (32%), Positives = 161/307 (52%), Gaps = 8/307 (2%)
Query: 454 IRSAILNEAVIVCSTLSFSGSALLSKLNHG----FDVVIIDEAAQAVEPATLVPLAT-GC 508
+ ++ E ++L F ++ KL+ D+++IDEAAQ E + +PL G
Sbjct: 498 MNEGLIKEFCFKMASLIFCTASSSYKLHSANMKPLDLLVIDEAAQLKECESTIPLQLPGI 557
Query: 509 KQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSR 568
+ L+GD QLPA V S V++ G+G SLF+RL G+ +L QYRMHP + FP+
Sbjct: 558 RHAILIGDECQLPAMVSSKVSKEAGFGRSLFERLSSLGHFKHLLNVQYRMHPSISFFPNS 617
Query: 569 EFYDEALEDGSDVEDYT-TRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVL 627
+FY + D +V+ + T+ + FG +SF ++ GKE S N+ EV V+
Sbjct: 618 KFYFNQILDAPNVKSKSYTKHYLSGPMFGSYSFINVR-GKEEHDDVGKSRKNMIEVAIVI 676
Query: 628 LLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGRE 687
+ L + + +ISPY QV Q++ + + V + TVDG QG E
Sbjct: 677 KIVRNLYKEWSGSNQKLSIGVISPYAAQVVAIQDKLGQKYEKLGNFSVKVKTVDGFQGGE 736
Query: 688 KDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKH-WNNLVKSA 746
+D+ I VR++ SIGFL++ +R NV +TRA+ + ++G TL + W +LV A
Sbjct: 737 EDIIIICTVRSNTGGSIGFLSNPQRTNVALTRARYCLWILGNERTLANSESIWEDLVLDA 796
Query: 747 EKQDCLF 753
+K+ C F
Sbjct: 797 KKRKCFF 803
>gi|6686402|gb|AAF23836.1|AC007234_8 F1E22.16 [Arabidopsis thaliana]
Length = 1075
Score = 165 bits (418), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 108/322 (33%), Positives = 164/322 (50%), Gaps = 35/322 (10%)
Query: 460 NEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLAT-GCKQVFLVGDPV 518
N ++ C+ S SA L ++ +++IDEAAQ E + +PL G + L+GD
Sbjct: 533 NAYLLFCTA---SSSARL-HMSSPIQLLVIDEAAQLKECESAIPLQLRGLQHAILIGDEK 588
Query: 519 QLPATVISPV-------------------------AEHLGYGTSLFKRLQRAGYPVKMLK 553
QLPA + S V A G SLF+RL G+ ++L
Sbjct: 589 QLPAMIKSNVGSLILTNYTHIHSLLFAYLISYVQIASEADLGRSLFERLVLLGHNKQLLN 648
Query: 554 TQYRMHPEVRSFPSREFYDEALEDGSDVE--DYTTRDWHEYRCFGPFSFFDIHEGKESQP 611
QYRMHP + FP+REFYD + D V Y + E + +GP+SF +I G+E
Sbjct: 649 MQYRMHPSISIFPNREFYDMKILDAPSVRLRSYEKKFLPE-KMYGPYSFINIAYGREQFG 707
Query: 612 AGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVES 671
G S N+ EV V + KL S+ + + + +ISPY+ QV QER E + E
Sbjct: 708 EGYSS-KNLVEVSVVAEIVSKLYSVSRKTGRTISVGVISPYKAQVFAIQERIGEKYNTEG 766
Query: 672 QKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCAS 731
V + +VDG QG E+D+ I S VR++ +IGFL++ +R NV +TRA+ + ++G +
Sbjct: 767 TFTVSVRSVDGFQGGEEDIIIISTVRSNGNGAIGFLSNQQRTNVALTRARYCLWILGNEA 826
Query: 732 TLREDKH-WNNLVKSAEKQDCL 752
TL ++ W LV A+ ++C
Sbjct: 827 TLTNNRSVWRQLVDDAKARNCF 848
>gi|307104875|gb|EFN53127.1| hypothetical protein CHLNCDRAFT_137486 [Chlorella variabilis]
Length = 949
Score = 165 bits (418), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 128/378 (33%), Positives = 193/378 (51%), Gaps = 38/378 (10%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIG---LKAHHSVNSVAIDH--- 428
+VLV APSN A+D + R TG+R +++ + + V L H+ V + I
Sbjct: 398 QVLVSAPSNIAVDHLAERTSQTGLRVVRLQARSREAVATTVEHLTLHYQVEHLDIPEAQE 457
Query: 429 ------LVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNH 482
L E+ + +AAD++K+ A ++ S+ IL A +VC+T + G + L+ N
Sbjct: 458 LRKLRLLKEELGELAAADERKYKALKR---SLEREILQAADVVCATCAGVGDSRLT--NF 512
Query: 483 GFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRL 542
F ++IDEA QAVEP ++PL G KQ+ LVGD QL +I+ VA G SLF+RL
Sbjct: 513 RFRRLLIDEATQAVEPEAMIPLVMGAKQLILVGDHCQLGPVIINKVAARAGLSQSLFERL 572
Query: 543 QRAGY-PVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYT-TRDWHEYRCFGPFSF 600
G P+++ V FPS FY+ AL++G V + T T + P F
Sbjct: 573 MLLGVKPIRL---------AVHEFPSNTFYEGALQNGVTVAERTRTNVLFPWPTDKPCMF 623
Query: 601 FDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQ 660
+ + G E A S++N E V + L+ S +Q+ II+PY Q
Sbjct: 624 Y-VQLGAEEISASGTSYLNRTEAASVEKIVTYLLK---SGVSPAQIGIITPYEGQRAHVV 679
Query: 661 ERFKETFGVESQKV---VDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGI 717
+ G Q + ++ +VD QGREKD I SCVR+++ + IGFLAD RR+NV +
Sbjct: 680 TVMTRS-GPMRQALYAEIECASVDSFQGREKDYIILSCVRSNEHQGIGFLADPRRLNVAL 738
Query: 718 TRAKSSILVVGCASTLRE 735
TRAK + VG + L++
Sbjct: 739 TRAKYGL--VGPLTNLKQ 754
>gi|167533295|ref|XP_001748327.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773139|gb|EDQ86782.1| predicted protein [Monosiga brevicollis MX1]
Length = 879
Score = 165 bits (417), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 174/618 (28%), Positives = 265/618 (42%), Gaps = 147/618 (23%)
Query: 258 NASQLEAIHEGLL-RKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLREIKRG 316
NASQ AI L R V IQGPPGTGKT TI ++ + T + S GG I+R
Sbjct: 225 NASQRAAIEMALTHRSCMVAIQGPPGTGKTHTIYHMV-VTMAQTLSDSGSNGGATRIQR- 282
Query: 317 PELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNSSRRYRVRV 376
PT + K +
Sbjct: 283 --------------------------------------PTDSHAQK-------------I 291
Query: 377 LVCAPSNSALDEIV--------LRLLN--------TGIRDE------------------- 401
L+CAPSN+A+DEI+ LR LN + R+E
Sbjct: 292 LICAPSNAAIDEILVRFSRSAELRALNIVRLGQASSVTRNEASTFSLDAQQGQRRSKVLD 351
Query: 402 NIRSYTPKIVRIGLKAHHS--------VNSVAIDHLVEQKRDDSAADKQKHGATRKDRDS 453
+RS ++ I +A + +N+ A D ++ + ++++ A + + S
Sbjct: 352 QMRSVDDELRSIEHEARAAESTDQFLKMNAHAGDLSAQRDLKNREQEQRRAAARQAELQS 411
Query: 454 IRSAI--------------LNEAVIVCSTLSFSGSAL---LSKLNHGFDVVIIDEAAQAV 496
R A+ L++A I+C+TL+ G+AL F IIDEAAQ
Sbjct: 412 RRRAMKKDLSALQEKSRNWLSQADIICTTLN--GAALDDLTRAAGVSFAYTIIDEAAQCA 469
Query: 497 EPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVK---MLK 553
E LV L + LVGD QLPAT++SP+ + YG S+F+RL + ++ ML
Sbjct: 470 ETEALVALQRCGSKTILVGDHRQLPATLLSPLGSRV-YGRSMFERLYPLLHAIQAAVMLD 528
Query: 554 TQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRD-WHEYRCFGPFSFFDIHEGKESQ-- 610
QYRMHP++ + S FY+ LE V +RD PF ++D E+
Sbjct: 529 VQYRMHPKICAIASNLFYEGRLETDPTVATRRSRDPILRGTKESPFLWYDTPPETEAAMT 588
Query: 611 ---PAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETF 667
G S+IN+ E + V+ L + L+ +++ I++PY Q + F
Sbjct: 589 RGGQGGPNSYINVREAEQVIQCLLTLCRIRLGLR--NRVTIVTPYAAQRNCISDHLTWAF 646
Query: 668 GVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVV 727
G ++ V ++TVD QG+E DV I+S VR S ++GF +D RR+NV +TRAK+ ++V+
Sbjct: 647 G-KAANAVRVSTVDAMQGQESDVIIYSAVRTS---ALGFTSDRRRINVALTRAKTCLIVL 702
Query: 728 GCASTLREDKHWNNLVKSAEKQDCL--FRVSKPY----ASFFS-DENLESMRKNATTDNV 780
G + L D W + + L F PY +SF + DE + + NA
Sbjct: 703 G-SKLLLTDPTWRGVFNHLSNMEHLLPFDAEPPYLKSSSSFVALDEPVGHIASNAL---- 757
Query: 781 QGADGHV--PHDDETMHY 796
G G+ P D + + Y
Sbjct: 758 -GTPGNFCDPKDPQILQY 774
>gi|218191369|gb|EEC73796.1| hypothetical protein OsI_08493 [Oryza sativa Indica Group]
Length = 352
Score = 165 bits (417), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 102/280 (36%), Positives = 149/280 (53%), Gaps = 14/280 (5%)
Query: 450 DRDSIRSAIL-NEAVIVCSTLSFSGSALLSKLNHG--FDVVIIDEAAQAVEPATLVPLAT 506
D+ SI ++ N I+C+ S S+ L L FD++++DEAAQ E +L+PL
Sbjct: 79 DKRSIEDFLVRNAKSILCTA---SSSSRLHYLPEASPFDLLVVDEAAQLKECESLIPLQL 135
Query: 507 -GCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSF 565
G + L+G QLPA V S V E +G SLF+RL G+P +L QYRMHP + F
Sbjct: 136 PGVRHAVLIGYEFQLPALVKSRVCEDAEFGRSLFERLSSLGHPKHLLDVQYRMHPGISKF 195
Query: 566 PSREFYDEALEDGSDVEDYTTRDWHEYRCFGP----FSFFDIHEGKESQPAGSGSWINID 621
P FY+ + SD E+ RD+ GP +SF ++ GKES+ S +N
Sbjct: 196 PVSSFYENKI---SDCENVLHRDYERKPLAGPMYGSYSFINVDAGKESKGKHDKSLMNPI 252
Query: 622 EVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVD 681
EV V + +L + ++SPY+ QV+ QER + + V + +VD
Sbjct: 253 EVAAVTRIVQRLFKESVDTGRKLCVGVVSPYKGQVRAIQERLGKAYETHGGFTVKVRSVD 312
Query: 682 GCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAK 721
G QG E+D+ IFS VR++ S+GFL++ R NV +TRAK
Sbjct: 313 GFQGAEEDIIIFSAVRSNTTGSVGFLSNVNRTNVALTRAK 352
>gi|302392833|ref|YP_003828653.1| DNA helicase [Acetohalobium arabaticum DSM 5501]
gi|302204910|gb|ADL13588.1| DNA helicase [Acetohalobium arabaticum DSM 5501]
Length = 747
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 109/304 (35%), Positives = 170/304 (55%), Gaps = 31/304 (10%)
Query: 458 ILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDP 517
+L+ A +VC+T S +GS +L N D++++DEA QA EPA L+PL T +V L GD
Sbjct: 447 LLSTADVVCTTNSTAGSEVLD--NFWADLLVVDEATQATEPAVLIPL-TKTDRVVLAGDH 503
Query: 518 VQLPATVISPVAEHLGYGTSLFKRL-QRAGYPVK-MLKTQYRMHPEVRSFPSREFYDEAL 575
QLP T++S A+ G +LF+RL G ++ ML+ QYRM+ + +F +REFY+ L
Sbjct: 504 KQLPPTILSERAKQQGLNYTLFERLIDMYGAKIRQMLRVQYRMNDLIMNFSNREFYNGLL 563
Query: 576 EDGSDVEDYTTRDWHEYRCFG------------PFSFFDIH--EGKESQPAGSGSWINID 621
E + +T D G P +FFD E + S S N
Sbjct: 564 ESADGIGGHTLADLDVSAPNGSRPAEKALVFDQPIAFFDTQGMNAPERSKSDSTSVENPI 623
Query: 622 EVDFVLLLFHKLISMYPQLKSSSQ-LAIISPYRHQVKQFQERFKETFGVESQKVVDITTV 680
E D V+ ++ + QL + + +A+I+PY+ QV+ ++ + GVE + TV
Sbjct: 624 EADLVI----EIAEVAKQLDFAEEDIAVIAPYKDQVELIDDKL-DLQGVE------VNTV 672
Query: 681 DGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWN 740
DG QGREK+V I S VR+++ +IGFL D RR+NV +TRAK ++++G AST+ ++ +
Sbjct: 673 DGFQGREKEVIILSFVRSNEYGNIGFLRDLRRLNVSLTRAKRKLIMIGDASTITSNEVYE 732
Query: 741 NLVK 744
L++
Sbjct: 733 RLIE 736
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 28/43 (65%)
Query: 251 EYIKENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLL 293
E+ +N N SQ +A+ + + + F L+ GPPGTGKT T + ++
Sbjct: 258 EFKNQNLNQSQKQAVRQAMAAEDFFLVHGPPGTGKTMTSIEII 300
>gi|168051009|ref|XP_001777949.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670709|gb|EDQ57273.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 791
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 129/407 (31%), Positives = 195/407 (47%), Gaps = 46/407 (11%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTG---IRDENIRSYTPKIVRIGLK--AHHSVNSVAID-- 427
RVL AP+N+A+D IV RL N G +R N P + L S+ + D
Sbjct: 362 RVLATAPTNAAVDNIVERLANAGLNVVRVGNPARVAPAVCSRSLSFIVDKSLTTFRGDLV 421
Query: 428 --------HLVEQKRDDSAADKQKH-------GATRKDRDSIRSAILNEAVIVCSTLSFS 472
L E +DS A + +K++++I A+ + VI+C T + +
Sbjct: 422 RRRANLRSDLRECLDNDSVAAGIRQVLKQLGKSLKQKEKEAINDALSSAQVILC-TNTGA 480
Query: 473 GSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHL 532
G L+ K FD+V++DEAAQA+EP+ +PL G ++ L GD QL T++S A
Sbjct: 481 GDPLIRK-QEAFDLVVVDEAAQAIEPSCWIPLLQG-RRCVLAGDASQLAPTIMSRTALDG 538
Query: 533 GYGTSLFKRLQR--AGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWH 590
G G SL +R +G ML TQYRMH + + S E Y +L V + RD
Sbjct: 539 GLGVSLMERAGNLHSGLLSTMLSTQYRMHSAIADWASHEMYGGSLRSAPAVASHLLRDTP 598
Query: 591 EYR----CFGPFSFFDIH-------EGKESQ--PAGSGSWINIDEVDFVLLLFHKLISMY 637
+ P D G E + PAG+GS+ N E D V+ L++
Sbjct: 599 GVKDTPVTKVPMLLLDTRLPFGSLIPGCEERLDPAGTGSFYNEGEADIVVDHIRALLATG 658
Query: 638 PQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVR 697
+ S +A+ SPY QV+ +R +E G E V + +VD QGRE D + S VR
Sbjct: 659 VE---PSSIAVQSPYMAQVQLLCDRIEEIPGAEG---VQVASVDSFQGREADAVVVSMVR 712
Query: 698 ASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVK 744
+++ +GFL D RRMNV +TRA+ + +V ++T+ + L++
Sbjct: 713 SNNIGVVGFLGDNRRMNVAVTRARKHVTIVCDSTTVSRNSFLQRLLQ 759
>gi|403341854|gb|EJY70244.1| DNA-binding protein SMUBP-2 [Oxytricha trifallax]
Length = 1044
Score = 164 bits (416), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 124/441 (28%), Positives = 214/441 (48%), Gaps = 76/441 (17%)
Query: 365 VVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPK--IVRIGLKAH--HS 420
++ S + + +++ CAPSN A+D I+ RL + PK IVRIG A S
Sbjct: 224 ILQSVEKQKAKIMACAPSNIAVDNIIERLY----------ASNPKLNIVRIGHPARLMES 273
Query: 421 VNSVAIDHLVEQK----------------------RDDSAADKQ----KHGATRKDRDSI 454
V +D L+ ++ R S +++ ++ +KD I
Sbjct: 274 VQQFCLDALISKRTDYGKQTNEIRRMINKLNQKLQRTKSKTERKDIYGEYKMLKKDLKQI 333
Query: 455 RSAILNE----AVIVCSTLSFSGSALLSK-LNHG-----FDVVIIDEAAQAVEPATLVPL 504
+N+ A ++C TL+ +G L++ +N+ FD+++IDE AQ++EPA +P+
Sbjct: 334 EQNHINDIFMRADVICCTLTSAGDKTLTRFINNNMQDSLFDMLVIDECAQSIEPACWIPI 393
Query: 505 ATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVK-MLKTQYRMHPEVR 563
K++ + GD QL ATV S A G SLF+R+ + + ML QYRM+ ++
Sbjct: 394 KFA-KKLVMAGDHKQLDATVKSDEASRKGLSLSLFERVMKFKNKISTMLDEQYRMNEKIM 452
Query: 564 SFPSREFYDEALEDGSDVEDYTTRDWH----EYRCFGPFSFFD-----IHEGKESQPAGS 614
+ ++ YD L+ DV++ D + E P D ++EG + Q
Sbjct: 453 KWSNQAMYDGNLKAHEDVKNRLMVDLYAQSQEELMLSPLLLIDTAGALMYEGIDEQSENE 512
Query: 615 GSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQ-- 672
+ N E D V+ L +L++M + S + +I+PY QV Q ++ + + +
Sbjct: 513 SKYNN-GECDLVIQLLKELVTMGIR---KSDIGVITPYNAQVNQIKKAIRGAEELHTHVE 568
Query: 673 ---------KVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSS 723
+ ++++TVDG QGREK+V I S VR++ K IGFL++ RRMNV +TRAK
Sbjct: 569 IGQIPQRGGERIEVSTVDGFQGREKEVIIISMVRSNPKGEIGFLSNERRMNVAVTRAKRL 628
Query: 724 ILVVGCASTLREDKHWNNLVK 744
++ + T+ + +L++
Sbjct: 629 CAIIADSGTVSRNNFLKDLIQ 649
>gi|10177997|dbj|BAB11370.1| unnamed protein product [Arabidopsis thaliana]
Length = 701
Score = 164 bits (416), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/310 (30%), Positives = 167/310 (53%), Gaps = 9/310 (2%)
Query: 449 KDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHG-FDVVIIDEAAQAVEPATLVPLA-T 506
++ D+ + N +I C+ SG+A ++ + G D++++DEAAQ E ++ L +
Sbjct: 357 ENNDTKTFCLQNADIIFCTA---SGAADMNPIRTGSVDLLVVDEAAQLKECESVAALQLS 413
Query: 507 GCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFP 566
G + L+GD +QLPA V + + E +G SLF+RL G+ +L QYRMHP + FP
Sbjct: 414 GLRHAVLIGDELQLPAMVHNEICEKAKFGRSLFERLVLLGHNKHLLNVQYRMHPSISRFP 473
Query: 567 SREFYDEALEDGSDV-EDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDF 625
++EFY ++D ++V E + + + FG FSF ++ G+E G S N+ EV
Sbjct: 474 NKEFYGGRIKDAANVQESIYQKRFLQGNMFGSFSFINVGRGEEEFGDGH-SPKNMVEVAV 532
Query: 626 VLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETF-GVESQKVVDITTVDGCQ 684
+ + L + + + + ++SPY+ QV+ QER + + +++ +VDG Q
Sbjct: 533 ISEIISNLFKVSSERRIKMSVGVVSPYKGQVRAIQERTTNKYSSLSGLFTLNVRSVDGFQ 592
Query: 685 GREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLR-EDKHWNNLV 743
G E+D+ I S VR++ +GFL + +R NV +TRA+ + V+G +TL W L+
Sbjct: 593 GGEEDIIIISTVRSNGNGKVGFLNNRQRANVALTRARHCLWVIGNETTLALSGSSWAKLI 652
Query: 744 KSAEKQDCLF 753
+ C +
Sbjct: 653 SESRTLGCFY 662
>gi|220919450|ref|YP_002494754.1| superfamily I DNA and RNA helicase [Anaeromyxobacter dehalogenans
2CP-1]
gi|219957304|gb|ACL67688.1| superfamily I DNA and RNA helicase [Anaeromyxobacter dehalogenans
2CP-1]
Length = 622
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 135/409 (33%), Positives = 195/409 (47%), Gaps = 58/409 (14%)
Query: 376 VLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAH--------HSVNSVAID 427
VL APSN A+D +V RL G+ +R P V GL H H +A
Sbjct: 226 VLAAAPSNLAVDNLVERLAAAGL--ACVRVGHPARVLPGLLEHTLEARVEAHEAARIA-Q 282
Query: 428 HLVEQK---RDDSAADKQKHGATR--KDRDSIRSA-----------------ILNEAVIV 465
LV+Q R D+ +QK G R R+ R A +L A +V
Sbjct: 283 GLVDQALALRRDARKRRQKRGPGRFSASREQEREARALLAEARRLEARAEAEVLERAQVV 342
Query: 466 CSTL-SFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATV 524
+TL S AL + F + ++DEA QAVEPA + L + V L GD +QLP TV
Sbjct: 343 LATLTSLDAPALAGRR---FALAVVDEATQAVEPAAYLALLRADRAV-LAGDHLQLPPTV 398
Query: 525 ISPVAEHLGYGTSLFKRLQRA-GYPVK-MLKTQYRMHPEVRSFPSREFYDEALEDGSDVE 582
+S A+ G G SLF+RL A G + ML Q+RM+ + +FPS Y AL
Sbjct: 399 LSAAAQAGGLGVSLFERLVEAHGDRARVMLAEQHRMNARIMAFPSEALYGGALRAHPAAA 458
Query: 583 DYTTRDWHEYRCFGPFSFFDIHEGK---ESQPAGSGSWINIDEVDFVLLLFHKLISMYPQ 639
D P D G+ E P GS S N E + +L++
Sbjct: 459 GRAIDD-------APLELVDT-SGRGFEEETPEGSDSKQNTGEAELAAAEVRRLLAAG-- 508
Query: 640 LKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRAS 699
+ + +A+ISPY QV +R ++ E + +++ TVDG QGREK+ + S VR++
Sbjct: 509 -LAPADVAVISPYDGQV----QRLRQLLADEVEAGLEVDTVDGFQGREKEAVVVSLVRSN 563
Query: 700 DKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEK 748
+ +GFLAD RRMNV +TRA++ ++VVG ST+ + + ++ AE+
Sbjct: 564 EAGEVGFLADVRRMNVALTRARAKLVVVGDGSTVSRHPFYRSFLEHAER 612
>gi|145353676|ref|XP_001421132.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|145357229|ref|XP_001422823.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581368|gb|ABO99425.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144583067|gb|ABP01182.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 553
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 144/481 (29%), Positives = 219/481 (45%), Gaps = 71/481 (14%)
Query: 276 LIQGPPGTGKTQTILGLLSA-------ILHATPA------------RVHSKGGLREIKRG 316
++QGPPG GKT I+ LL+ +L P+ R + + G
Sbjct: 87 MVQGPPGCGKTHFIVSLLAVLAAKKQRVLVCAPSNKAVCVVMELYLRTCGEDAAPCVLTG 146
Query: 317 PELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNSSRRYRVRV 376
E + E + G A + + R N++ F +G + E ++RR
Sbjct: 147 AEDTLREASSVDGGAMDYFI--FERCNVIASSFRRSF--VSGGDGIRESAKAARR----- 197
Query: 377 LVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQKRDD 436
AL+ I S+ +V GL A +++ D + R +
Sbjct: 198 --------ALESIA-------------PSFCKGVVAEGLSAVAAMD----DEASMRARGE 232
Query: 437 SAADKQKHGATRKDR-DSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQA 495
A + + G+ R +R D LN A +V TL+ +G +++S L D +++DEAAQA
Sbjct: 233 EIAREIEKGSGRGERSDEFAREALNRASLVFCTLASAGQSIMSSLEQP-DALVVDEAAQA 291
Query: 496 VEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYP-VKMLKT 554
+EP +P ++ LVGDP QLPAT+IS +A G+ TSL +RL A +L T
Sbjct: 292 LEPEIAIPFLRYPRKALLVGDPAQLPATLISEIARRHGHATSLMERLMSANAERASLLDT 351
Query: 555 QYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHE--YRCFGPFSFFDIHEGKESQPA 612
QYRMHP + S+P+ +FY L + V TR+ + ++F D+ ES
Sbjct: 352 QYRMHPSIASWPAAQFYGGRLANADHV---LTRNLPQGLSSSVPSYAFVDV-ASVESGGV 407
Query: 613 GSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQ 672
G W N E D L L + P L + I+ Y QV+ + GV
Sbjct: 408 GKSKW-NQREADVACALIRALKTKSPTLF----VVCITFYSAQVRAIARALQRA-GVRD- 460
Query: 673 KVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCAST 732
V + +VD QG E DV + S VR++ K ++GFL+D RR+NV +TRAK S +V+G T
Sbjct: 461 --VAVHSVDSFQGSEADVVVCSAVRSNAKANVGFLSDKRRLNVALTRAKYSSIVLGSRDT 518
Query: 733 L 733
L
Sbjct: 519 L 519
>gi|297805252|ref|XP_002870510.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297316346|gb|EFH46769.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 818
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 100/312 (32%), Positives = 174/312 (55%), Gaps = 13/312 (4%)
Query: 449 KDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHG-FDVVIIDEAAQAVEPATLVPLA-T 506
+++D+ + N +I C+ SG+A ++ + G D++++DEAAQ E ++ L +
Sbjct: 474 ENKDTKTFCLQNADIIFCTA---SGAADMNPVRTGSIDLLVVDEAAQLKECESVAALQLS 530
Query: 507 GCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFP 566
G + L+GD +QLPA ++ + E +G+SLF+RL G+ L QYRMHP + FP
Sbjct: 531 GLRHAVLIGDELQLPA-MMWQICEKAKFGSSLFERLVLLGHNKHFLNVQYRMHPSISRFP 589
Query: 567 SREFYDEALEDGSDVED--YTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVD 624
++EFY ++D ++V++ Y R + + FG FSF ++ G+E G S N+ EV
Sbjct: 590 NKEFYGGKIKDAANVQESIYQKR-FLQGNMFGSFSFINVGLGEEEFGDGH-SPKNMVEVA 647
Query: 625 FVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKV--VDITTVDG 682
+ + L + + + + ++SPY+ QV+ QER K + S ++ +++ +VDG
Sbjct: 648 VISEIISSLFKVSSERRIKMSVGVVSPYKGQVRAIQERTKNKYSSLSGELFTLNVRSVDG 707
Query: 683 CQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLR-EDKHWNN 741
QG E+DV I S VR++ +GFL + +R NV +TRA+ + VVG +TL W
Sbjct: 708 FQGGEEDVIIISTVRSNGNGKVGFLNNRQRANVALTRARHCLWVVGNETTLALSGSIWAK 767
Query: 742 LVKSAEKQDCLF 753
L+ + + C +
Sbjct: 768 LISESRTRGCFY 779
>gi|431799922|ref|YP_007226826.1| type III restriction enzyme, res subunit [Echinicola vietnamensis
DSM 17526]
gi|430790687|gb|AGA80816.1| Type III restriction enzyme, res subunit [Echinicola vietnamensis
DSM 17526]
Length = 643
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 133/419 (31%), Positives = 204/419 (48%), Gaps = 50/419 (11%)
Query: 355 PTTGNELKP-EVVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIR-------SY 406
P TG + + + R +VLVCAPSN+A+D +V +LL G+ I
Sbjct: 207 PGTGKTTTMVQAIEETLRSHRQVLVCAPSNAAVDLLVEKLLAIGLSTLRIGHPARVDDEL 266
Query: 407 TPKIVRIGLKAHHSVNSVA-IDHLVEQ--------KRDDSAADKQKHG-----------A 446
+ + + H S + + E+ KR+ AA++Q+ A
Sbjct: 267 LEQTLDAKIAQHSSFRDLKKLRKAAEEYRKLGRKYKRNFGAAERQQRKQLFAEASKVKEA 326
Query: 447 TRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLAT 506
R D I + + ++ +TL + +L + F VV IDEAAQ +EPAT +P+
Sbjct: 327 ARHLEDYILYDVFQQNQVIATTLVGANHPVLKGM--AFPVVFIDEAAQGLEPATWIPVLK 384
Query: 507 GCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKR-LQRAGYPVKMLKTQYRMHPEVRSF 565
+++ + GD QLP T+ S A G +LF++ +QR +ML+ QYRM + F
Sbjct: 385 -AQKIVMAGDHCQLPPTIKSYEAAKDGLSETLFEKVIQRQPEASRMLRVQYRMPELIMRF 443
Query: 566 PSREFYDEALEDGSDVEDYTTRDWHEYRCFGPF----SFFDIHEGKESQPAGSGSWINID 621
S FY LE + +++ H+ R S F H K+S S +N D
Sbjct: 444 SSEYFYHGQLEAAALTDEHFL--GHDERVMAYIDTAGSGFGEHLEKDSL-----SKLNTD 496
Query: 622 EVDFVLLLFHKL---ISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKV---- 674
E F L + KL I + + + + +ISPY+ QVK+ E +E E+ +
Sbjct: 497 EARFGLGMLEKLVEKIGVSTFKEKAFTIGVISPYKAQVKKLAELMEEGSEYENLRQLSDH 556
Query: 675 VDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTL 733
V I T+DG QG+E+DV + S VR++D+ IGFLAD RRMNV +TRAK ++VVG + TL
Sbjct: 557 VTIGTIDGFQGQERDVVLISMVRSNDEGEIGFLADTRRMNVALTRAKRKLMVVGDSGTL 615
>gi|241634349|ref|XP_002410507.1| splicing endonuclease positive effector sen1, putative [Ixodes
scapularis]
gi|215503436|gb|EEC12930.1| splicing endonuclease positive effector sen1, putative [Ixodes
scapularis]
Length = 1103
Score = 163 bits (413), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 120/347 (34%), Positives = 173/347 (49%), Gaps = 39/347 (11%)
Query: 426 IDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKL----- 480
I L E+KR K G +R+ + ++ IL +A +V STL+ S LL +
Sbjct: 766 ILRLSEEKR------KCLQGFSRQSYE-MKLKILRKANVVLSTLNSCRSRLLEEAFGRAS 818
Query: 481 NHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFK 540
F VI+DEA Q E TL+ L ++ L+GDP+QLPATV+S A L + SLF+
Sbjct: 819 PQCFSSVIVDEATQCTEVETLLCLQYRTSRLVLIGDPLQLPATVLSRHAVQLNFQESLFE 878
Query: 541 RLQRA--------GYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEY 592
R + V ML Q RMH E+ SFPSR FYD L+ + ++ Y
Sbjct: 879 RFYKCLENEKKGGAQAVFMLTDQRRMHSEICSFPSRYFYDGKLQPVAGLDA-------SY 931
Query: 593 RCF--GPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIIS 650
F P+ F++ E S S N E +FV+ L H + + + + + +I+
Sbjct: 932 ASFPLNPYLVFNVLGSPEMNDGSSTSMANHGEAEFVVRLCHTVRKV---VGPGTSICVIT 988
Query: 651 PYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKS-IGFLAD 709
YR Q E + E + TVDG QG+E+DV + SCVRAS IGF+AD
Sbjct: 989 FYRAQKTTISELLQRDSSFE------VNTVDGFQGQERDVVVLSCVRASHPLGYIGFVAD 1042
Query: 710 YRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRVS 756
RR+NV ITRA+ ++ + G TL + W+ L+K A +D + VS
Sbjct: 1043 ARRLNVSITRARKALFICGHLDTLEDSLEWSALIKDARNRDRVRNVS 1089
>gi|319957167|ref|YP_004168430.1| DNA helicase [Nitratifractor salsuginis DSM 16511]
gi|319419571|gb|ADV46681.1| DNA helicase [Nitratifractor salsuginis DSM 16511]
Length = 733
Score = 163 bits (412), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 166/524 (31%), Positives = 245/524 (46%), Gaps = 80/524 (15%)
Query: 255 ENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAILHATPARVHSKGGLREIK 314
E N QLEA+ L + LI GPPGTGKT T+ ++ A HA SKG
Sbjct: 243 EGLNEPQLEALRRSLGMEELFLIHGPPGTGKTTTLTRVIQA--HA------SKG------ 288
Query: 315 RGPELPMHEKYNHWGRASPWLVGANPR---DNIMPIDGDDG--FFPTTGNELKPEVVNSS 369
MH L A+ DN++ DG G+ P ++SS
Sbjct: 289 ------MH-----------ILATADSNVAVDNLLEKLAGDGDLRLIRVGH---PARIDSS 328
Query: 370 --RRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRI-GL----------- 415
R +R L AP + E+ R T R E R P R+ G+
Sbjct: 329 LERFSLMRQLTEAPEYQEIRELQ-RQAETAAR-ERARYSKPTPARLRGMSRDRVLKLAKE 386
Query: 416 -KAHHSVNSVAIDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGS 474
++ V++ I + +DS + + R + S +L A +V +T S GS
Sbjct: 387 GRSSRGVSAETIRSMARWIEEDSKTE-EAFERLRSLESATISRLLEAADVVLATNSMVGS 445
Query: 475 ALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGY 534
L ++ FD+ ++DE +Q +EP+TL+PL + V L GD QLP TV+S + E L
Sbjct: 446 DALEGMS--FDLAVVDEGSQQIEPSTLLPLLRAPRGV-LAGDHRQLPPTVLSDL-EILK- 500
Query: 535 GTSLFKRL-QRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYT--TRDWHE 591
SLF+RL R P ML+ QYRMH + FP+R YD AL V T E
Sbjct: 501 -RSLFERLISRKLVPATMLRVQYRMHETIMDFPNRLMYDGALVADPSVARRTLPVEKPPE 559
Query: 592 YRCFGP---FSFFDIHEGKESQ--PAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQL 646
C P F D E + S+ P S S+ N E +L +L++ + +Q+
Sbjct: 560 DPCLDPSFPVVFADTSEMEASEHLPERSTSYENPTEAGHLLRWVTELVACG---IAPAQI 616
Query: 647 AIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGF 706
II+PY QVK + +E VE + +VDG QGREK+V + S VR++ +S+GF
Sbjct: 617 GIITPYLAQVKLLRRLLEEFPDVE------VKSVDGFQGREKEVILISFVRSNLAQSVGF 670
Query: 707 LADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQD 750
++D RR+NV +TRA+S +L++G STL ++ + L + E ++
Sbjct: 671 VSDPRRLNVAMTRARSKLLMIGDRSTLEPNEPFGKLFEWLESRE 714
>gi|403222822|dbj|BAM40953.1| regulator of nonsense transcripts-related protein [Theileria
orientalis strain Shintoku]
Length = 1221
Score = 163 bits (412), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 115/366 (31%), Positives = 182/366 (49%), Gaps = 31/366 (8%)
Query: 374 VRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQK 433
VR+L A +N A D ++ L GI +RIG + + AI L
Sbjct: 803 VRILAVADTNVAADNLIEGLSKRGI----------TALRIGASSEWDLQEEAIKGLYRYN 852
Query: 434 RDDSAADKQKHGATRKDRDSIRSAILNEAV----IVCSTLSFSGSALLSKLNHGFDVVII 489
+ + K+ +++R + EA+ IV +T SG+ +LS +H F VI+
Sbjct: 853 N----YLQMRMAGMHKEANTLRVLLFTEAIKKHKIVIATCVGSGNEILS--SHTFPFVIV 906
Query: 490 DEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRL-QRAGYP 548
DE AQ++E + ++P+ GC+ + L+GD QL T+IS A LG SL +RL + P
Sbjct: 907 DECAQSIEASNMIPIGRGCRSLVLIGDHKQLRPTIISMQASTLGLNKSLLERLIEDKVAP 966
Query: 549 VKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYR---CFGPFSFFDIHE 605
V +L Q RMHP + FP+ FYD + + DV D ++ C F D+
Sbjct: 967 VHLLDIQRRMHPSIAEFPNMHFYDGQIRN-QDVNDTNRPPILGFKWPVCGNNLVFVDVST 1025
Query: 606 GK---ESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQER 662
G + + + S N E+ VL L + + +Q+ I++PY Q ++
Sbjct: 1026 GSPNTQFETSHGTSKFNTMELTCVLALVNSFLKAGDV--KENQIGILTPYDAQRGMIRKN 1083
Query: 663 FKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKS 722
++ +++I +VDG QG+EKD+ IFS VR++ K IGFL D RRMNV +TRAK
Sbjct: 1084 VNYMKDYKTH-LIEIDSVDGFQGKEKDLIIFSAVRSNVSKDIGFLRDPRRMNVMLTRAKR 1142
Query: 723 SILVVG 728
++++G
Sbjct: 1143 GLIILG 1148
>gi|71663525|ref|XP_818754.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70884023|gb|EAN96903.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 1989
Score = 163 bits (412), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 134/400 (33%), Positives = 199/400 (49%), Gaps = 55/400 (13%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQKR 434
RVLVCAPSN A+DE++LRL T R + +++R+G++ SV+ ++ L
Sbjct: 1506 RVLVCAPSNCAVDEVLLRLRGTAKRVPQLGDL--QLLRVGVR--DSVDREVLESLPPLFF 1561
Query: 435 DD---------------SAADKQKHGA----TRKDRDSIRSAILNEAVIVCSTLSFSGSA 475
DD SA ++G+ ++R +IR +L A +VCSTL GS
Sbjct: 1562 DDCVRALADVSNTSHSISAGRMMRNGSGDLLKNRNRQNIRDHVLFGAHVVCSTL---GS- 1617
Query: 476 LLSKLNHG---FDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHL 532
LS+L FDVVI+DEA+Q EP L L K+ LVGD QL TV+ VA
Sbjct: 1618 -LSQLQRADFLFDVVIVDEASQGTEPDVLQALMLAKKRAVLVGDFRQLQPTVLCQVAAAR 1676
Query: 533 GYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDW--- 589
G SL +RL G+ L+ QYRMHP++ +FP+R FY + L + V RD
Sbjct: 1677 GLKRSLLQRLLHQGHRSYFLREQYRMHPDICAFPNRYFYGKKLLTHASVMAR-QRDGPSQ 1735
Query: 590 -----HEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLL---LFHKLISMYPQLK 641
+ R F F D+ +G G S +N E + V+L F ++ + P+ +
Sbjct: 1736 ALPLPTDIRRVPRFVFVDVQDGLMEWGRGR-SLMNRQEAEAVVLQMRRFRAMLQLTPE-E 1793
Query: 642 SSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDK 701
+ + II+ Y+ Q + + + E + + ++TVD QG+EKD+ SCVRA
Sbjct: 1794 FARRTGIITFYQAQKEAILQLLLQE---ERRSELQVSTVDSFQGKEKDIIFISCVRALHA 1850
Query: 702 KS-------IGFLADYRRMNVGITRAKSSILVVGCASTLR 734
S +GFL D+ R+NV +TRAK ++ G T R
Sbjct: 1851 ASRLDGTAALGFLEDWHRINVSLTRAKEFCVLFGHKKTFR 1890
>gi|283779091|ref|YP_003369846.1| AAA ATPase [Pirellula staleyi DSM 6068]
gi|283437544|gb|ADB15986.1| AAA ATPase [Pirellula staleyi DSM 6068]
Length = 639
Score = 163 bits (412), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 128/418 (30%), Positives = 192/418 (45%), Gaps = 66/418 (15%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIG--LKAHHSVNSVAIDHLVEQ 432
+VL APSN A+D ++ +L G+R ++R+G + S++ + +D VE
Sbjct: 235 KVLATAPSNLAVDHLLEKLHLAGVR----------VLRLGHPARVQESLHHLVLDEQVEN 284
Query: 433 KRDDSAADKQKHGATR-KDRDS--------------------------------IRSAIL 459
D + A K A R KDR + + +L
Sbjct: 285 HPDVAVARKLVRDALRLKDRAAKFTRAKPPPGYKQELRAEARELFSDARRIEAGVVRYLL 344
Query: 460 NEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQ 519
+ A +V +TL+ + +L + FDV +IDEAAQA EPA P +V L GDP Q
Sbjct: 345 DSADVVLATLTGIDATVLE--DRRFDVAVIDEAAQATEPACW-PALLRADRVILAGDPFQ 401
Query: 520 LPATVISPVAEHLGYGTSLFKRLQRAGYPV--KMLKTQYRMHPEVRSFPSREFYDEALED 577
LP T+ISP A G SL +RL L QYRMH + +F S EFY++ L
Sbjct: 402 LPPTIISPEAARGGLARSLMERLLETSTTTISHRLAVQYRMHQSIMAFSSAEFYEQGLTA 461
Query: 578 GSDVEDYTTRDWHEY----RCFGPFSFFDIHEGKESQPAGSG--SWINIDEVDFVLLLFH 631
V + D E R F D + AGS S N E + V+ L
Sbjct: 462 DPSVASHLLSDLSEVTPTDRTSTALEFIDTAGAGYDERAGSSQESRENPQEAELVVKLA- 520
Query: 632 KLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVA 691
+++ ++ +AIISPY QV+ + T +D+ T+DG QGRE +
Sbjct: 521 --LALRDAGVAAEAIAIISPYAAQVRLLRRLLDGTL-------IDVDTIDGFQGRESEAV 571
Query: 692 IFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQ 749
I S VR++ IGFLAD RRMNV ITRA+ ++++G ++T+ + ++ E++
Sbjct: 572 IISLVRSNATGEIGFLADVRRMNVAITRARRKLIIIGDSATIGGHDFYARMLSWVERE 629
>gi|325294544|ref|YP_004281058.1| DNA helicase [Desulfurobacterium thermolithotrophum DSM 11699]
gi|325064992|gb|ADY72999.1| DNA helicase [Desulfurobacterium thermolithotrophum DSM 11699]
Length = 721
Score = 162 bits (411), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 108/311 (34%), Positives = 168/311 (54%), Gaps = 25/311 (8%)
Query: 458 ILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDP 517
I+ A +V ST S S LL + FDV +IDE +Q VEP+TL+P+ K ++ GD
Sbjct: 424 IIASADVVISTNSMVKSELLEGFH--FDVAVIDEGSQQVEPSTLIPIMKADK-FYIAGDH 480
Query: 518 VQLPATVISPVAEHLGYGTSLFKRLQRAGYPVK-MLKTQYRMHPEVRSFPSREFYDEALE 576
QLP TV S A+ L +LF+RL + + ML+ QYRM+ ++ FP+REFY+ L
Sbjct: 481 KQLPPTVTSEEAKELE--KTLFERLINSHSELSSMLQVQYRMNEKIMEFPNREFYEGKLR 538
Query: 577 DGSDVEDYTTRDW--HEYRCFG-------PFSFFDIHE--GKESQPAGSGSWINIDEVDF 625
V+++T D+ E F P +F D + E QP GS S+ N +E
Sbjct: 539 AAEIVKNHTLADFDLKEPEKFKEILNPSEPLAFLDTSDINAYEFQPEGSTSYENYEEAKI 598
Query: 626 VLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQG 685
+ + +L + K + II+PY QVK ++ +E V++ +VDG QG
Sbjct: 599 AISIAEELCKIGVDKKD---IGIITPYAAQVKLIKQLL-----LEKDLKVEVNSVDGFQG 650
Query: 686 REKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKS 745
REK+V I S VR++D+ IGFL D RR+NV ITR K ++ +G A TL + + +++
Sbjct: 651 REKEVIIISFVRSNDEGEIGFLKDLRRLNVAITRPKRKLIAIGNAETLSNHEVYKRFIEN 710
Query: 746 AEKQDCLFRVS 756
+++ +++
Sbjct: 711 IKEKGTFLKLN 721
Score = 42.7 bits (99), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 258 NASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLLSAIL 297
N +Q+ A+ + L K F LI GPPGTGKT TI L+ ++
Sbjct: 241 NKTQINAVKQALGAKDFYLIHGPPGTGKTSTITELIVQLV 280
>gi|308161426|gb|EFO63875.1| Regulator of nonsense transcripts 1-like protein [Giardia lamblia
P15]
Length = 1303
Score = 162 bits (411), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 152/510 (29%), Positives = 236/510 (46%), Gaps = 60/510 (11%)
Query: 258 NASQLEAIHEGLLRKAFVLIQGPPGTGKT---QTILGLLSAILHATPARVHSKGGLREIK 314
N SQ + I + +L + L+QGPPG GKT + L S + ++ H G R+
Sbjct: 801 NFSQKDVI-QYVLSRPITLVQGPPGCGKTFIGACLAWLFSKVYGSSD---HDSGSFRQTA 856
Query: 315 RGPELPMHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNSSRRYRV 374
P L A+ L A + P + + E S Y
Sbjct: 857 LVPVLICCPS----NTAAESLTLA-----LEPFGLPVVRVVSLARQRLAEYEESPNTYAD 907
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPK----------IVRIGLKAHHSVNSV 424
RV + L E VL+L + D+ +TP + I +K + V
Sbjct: 908 RVCL-----HVLFEEVLKL---ALGDDAPSDFTPSKEARLIYENMLDEIPIKQFNEV--- 956
Query: 425 AIDHLVEQKRD--DSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNH 482
++L +K++ D A + K I + I++ A +V T S S LS+++
Sbjct: 957 -YNYLQMKKKENIDVALKQSAEEEISKAMFEIENIIISSAKVVICTCSTSYDNHLSRVH- 1014
Query: 483 GFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRL 542
F +I+DE+ QA+EP TL + GC + L+GD QL V + +A H SL++RL
Sbjct: 1015 -FSSLIVDESTQAIEPDTLCAIGHGCSHIVLMGDHKQLGPIVATNIARHSKLDLSLYERL 1073
Query: 543 QRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVED-------YTTRDWHEYRCF 595
QRAG L QYRMHP + +FPS FY+ L++G D +T +
Sbjct: 1074 QRAGIEPHSLTVQYRMHPALSAFPSNTFYNGMLQNGVTQADRQLVPKPLSTESFPWPMPS 1133
Query: 596 GPFSFFDIHEGKESQPAGSGSWINID-EVDFVLLLFHKLISMYPQLKSSSQLAIISPYRH 654
P F+ + E G G+ + D E+ V + +L+ Y +LK + I++PY +
Sbjct: 1134 TPSFFWHVQGTHE---IGHGTSLRNDTEILCVEAIVDQLLKCY-ELK-QGDIGIVTPYDY 1188
Query: 655 QVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMN 714
Q Q + + K+ E V + +VD QG EK+V IFS VR+ DK IGFL D RR+N
Sbjct: 1189 QKCQIEMQLKDAGYSE----VFVNSVDAFQGHEKEVIIFSTVRSVDKH-IGFLKDQRRLN 1243
Query: 715 VGITRAKSSILVVGCASTLREDKHWNNLVK 744
VG+TR + ++++VG A+ L D W +L++
Sbjct: 1244 VGLTRCRCALIIVGNATALAIDDTWRSLIQ 1273
>gi|189463893|ref|ZP_03012678.1| hypothetical protein BACINT_00227 [Bacteroides intestinalis DSM
17393]
gi|189438466|gb|EDV07451.1| putative DNA helicase [Bacteroides intestinalis DSM 17393]
Length = 629
Score = 162 bits (411), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 125/401 (31%), Positives = 202/401 (50%), Gaps = 36/401 (8%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIR----------DENIRSYTPKIVRIGLKAHHSVNSV 424
+VLVCA SN+A+D I +L++ G+ ++ + S+T + G A+ + S+
Sbjct: 234 QVLVCAQSNTAVDWISEKLVDRGVNVLRIGNPTRVNDKMLSFTYERRFEGHPAYSELWSI 293
Query: 425 --AIDHLVEQKRDDSAADKQKHGATRKDRD-------SIRSAILNEAVIVCSTLSFSGSA 475
AI + + R + + RD I + + + A ++ STL S
Sbjct: 294 RKAIREMGGKHRGSYEERESARNRMSRLRDRATQLEIQINADLFDNAHVITSTLVSSNHR 353
Query: 476 LLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYG 535
+L+ H F + IDEAAQA+E A + + +V L GD QLP T+ A G
Sbjct: 354 ILN--GHRFGTLFIDEAAQALEAACWIAIRK-ADRVVLAGDHCQLPPTIKCYEAARGGLE 410
Query: 536 TSLFKRLQRAGYP--VKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYR 593
++L +R+ A P V +LK QYRMH E+ FPS+ FY+ LE ++ DW
Sbjct: 411 STLMERVV-ANKPSTVSLLKVQYRMHEEIMKFPSQWFYNGELEAAPEIRYRGILDWDT-- 467
Query: 594 CFGPFSFFDIHEG--KESQPAGSGSWINIDEVDFVLL---LFHKLISMYPQLKSSSQLAI 648
P S+ D E KE + IN E D +L ++ I L+ I
Sbjct: 468 ---PISWIDTSEMDFKEEFVGETFGRINKAEADLLLQELKVYINRIGGKRVLEERIDFGI 524
Query: 649 ISPYRHQVKQFQERFKETFGVESQK-VVDITTVDGCQGREKDVAIFSCVRASDKKSIGFL 707
ISPY+ QV+ + + K + ++ + ++ + TVDG QG+E+DV S VRA+++ IGFL
Sbjct: 525 ISPYKAQVQYLRNKIKASGSLKPYRSLLTVNTVDGFQGQERDVIFISLVRANEEGQIGFL 584
Query: 708 ADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEK 748
D RRMNV ITRA+ ++++G +TL+ K ++ L++ ++
Sbjct: 585 NDLRRMNVAITRARMKLVILGEVNTLKHHKFYHKLIEHIQQ 625
>gi|157123740|ref|XP_001653871.1| splicing endonuclease positive effector sen1 [Aedes aegypti]
gi|108874291|gb|EAT38516.1| AAEL009618-PA [Aedes aegypti]
Length = 675
Score = 162 bits (411), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 150/520 (28%), Positives = 233/520 (44%), Gaps = 116/520 (22%)
Query: 341 RDNIMPIDGDDGFFPTTGNELKPEVVNSSRR----YRVRVLVCAPSNSALDEIVLRLL-- 394
R +IM I G G T ++L ++ RR R ++LVCA SN+A+D IVL+L+
Sbjct: 191 RPHIMLIQGPPG---TGKSKLISNLILQLRRGIPNRRPKILVCAQSNTAVDVIVLKLMML 247
Query: 395 -NTGIRDENIRSYTPKIVRIGL--KAHHSVNSVAID-----HLVEQKR------------ 434
+DE ++R G K HH V +D H+ EQ R
Sbjct: 248 FRLLKKDERC-----NLLRTGASNKVHHECRIVFLDDLARKHVDEQIRCRKLRDDDPIYE 302
Query: 435 --------------------------------------DDSAADKQKHGATRKDRDSIRS 456
D DK++ G +
Sbjct: 303 TYYLEGGSLLQTTRLQDELDQLEARLDQIKRLLPENFEDMDLYDKERRGMEM----HAKK 358
Query: 457 AILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGD 516
+ +A +VC+TL GS + FDV IIDEA Q E A+ PL K++ LVGD
Sbjct: 359 QFVAKADVVCTTLGSCGSLTDYTQSLRFDVCIIDEATQCTEIASFTPLQFDVKKLILVGD 418
Query: 517 PVQLPATVISPVAEHLGYGTSLFKRLQRAGY-----PVKMLKTQYRMHPEVRSFPSREFY 571
QLP V G SLF R+Q + VKML TQYRMHPE+ +P+ FY
Sbjct: 419 VKQLPPLVFGKECAEAGLKNSLFSRIQNSFIGTNLEGVKMLTTQYRMHPEILKWPNEYFY 478
Query: 572 DEALEDGSDVEDYTTRDWHEYRC----FGPFSFFDIHEGKESQPAGSGSWINIDEVDFVL 627
D L T D +C F P++ F + E +++Q N +E+ FVL
Sbjct: 479 DGKL----------TSDPKATKCDGFPFKPYTIFSL-ECQQNQTQMEHQIYNNEEIQFVL 527
Query: 628 LLFHKLISMYPQLKSSSQLAIISPY-RHQVKQFQERFKETFGVESQKV--VDITTVDGCQ 684
L ++I + S +AII+PY RH K+ E+F ++++K+ V + ++D Q
Sbjct: 528 KLLTEIIQFCDRHTS---IAIITPYSRH--KRECEKF-----LQAKKITQVSVLSIDSVQ 577
Query: 685 GREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVK 744
G+E DV + S R+ GFL + +R+NV +TRA+ +++ G + LR+ W++L++
Sbjct: 578 GQEYDVVVISLARSI---GTGFLDNPQRLNVALTRARKCLVMCGNFADLRDANVWSDLLR 634
Query: 745 SAEKQDCLFRVSKPYASF----FSDENLESMRKNATTDNV 780
AE + L+ + + F ++ + +RK+ T D +
Sbjct: 635 DAEHRKVLYHIEEDDEYDDVDTFVEKVMRHLRKSPTADAI 674
>gi|339251874|ref|XP_003371160.1| hypothetical protein Tsp_09417 [Trichinella spiralis]
gi|316968637|gb|EFV52895.1| hypothetical protein Tsp_09417 [Trichinella spiralis]
Length = 1030
Score = 162 bits (411), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 120/387 (31%), Positives = 184/387 (47%), Gaps = 27/387 (6%)
Query: 376 VLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVA----IDHLVE 431
+LVCAPSN A V+R+ E I S L H+ V + +D L +
Sbjct: 482 ILVCAPSNVA----VIRMCAKS--REAIDSPVS-----FLALHNQVRYLEGEEELDKLWQ 530
Query: 432 QKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNH-GFDVVIID 490
K + R R +L A +VC T +G + NH F V+ID
Sbjct: 531 LKEETGELSSLDEYRFRFLRSKCERDLLKHADVVCCTCVAAGDP---RFNHIRFRAVLID 587
Query: 491 EAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVK 550
E+ QA EP L+P+ TG +QV LVGD QL V+ A G SLF+RL G
Sbjct: 588 ESTQATEPECLIPIMTGARQVILVGDHCQLGPVVMCKKAARAGLNQSLFERLVILGNRPI 647
Query: 551 MLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPF--SFFDIHEGKE 608
L+ QYRMHP + S PS FY+ L++G E + ++R P FF +E
Sbjct: 648 RLQVQYRMHPLLSSLPSNLFYEGTLQNGV-TEQERILEGVDFRWPNPTVPMFFWCTASQE 706
Query: 609 SQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFG 668
+ S++N E + + K + + + Q+ II+PY Q + +
Sbjct: 707 EISSSGTSFLNRAEAAHIEKIATKFLRSGIR---ADQIGIITPYEGQRAYIVQHMLLSGP 763
Query: 669 VESQ--KVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILV 726
+ ++ + +++ +VD QGREKD+ + SCVR+++ IGFL D RR+NV +TRA+ +++
Sbjct: 764 LNNKLYQEIEVASVDAFQGREKDIILLSCVRSNEHSGIGFLNDPRRLNVALTRARYGLII 823
Query: 727 VGCASTLREDKHWNNLVKSAEKQDCLF 753
VG L W++L++ + CL
Sbjct: 824 VGNPKVLSRQPMWHSLLRFCRENHCLL 850
>gi|340521489|gb|EGR51723.1| Hypothetical protein TRIREDRAFT_55637 [Trichoderma reesei QM6a]
Length = 1734
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 128/381 (33%), Positives = 200/381 (52%), Gaps = 43/381 (11%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQKR 434
R+LV AP+++A+D ++ R L +++ +++ KIV L+ V V D + +
Sbjct: 1346 RILVTAPTHNAVDNVMRRYLKRIEQEDALQN--SKIV--PLRVATEVRKVGED--LRKYT 1399
Query: 435 DDSAADKQKHGATRKDRDSIRSAI--LNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEA 492
D+ A ++ + + +D++R A + EA I+ +T +G LL + FD VI+DEA
Sbjct: 1400 CDALAGQEVYSS----QDAMRKAKKRVKEAGIIFTTCIGAGLGLLR--DQFFDTVIVDEA 1453
Query: 493 AQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRL-----QRAGY 547
+Q EPA+LVPL GC++ LVGD VQL TV + +A L + SLF+RL G
Sbjct: 1454 SQQTEPASLVPLIKGCQKAILVGDHVQLRPTVQN-IALALNFDVSLFERLYTRQEMTRGM 1512
Query: 548 PVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDY----TTRDWHEYRCFGPFS---- 599
ML TQYRMHP + SF S+EFYD L G +D ++ W E +
Sbjct: 1513 EKVMLDTQYRMHPSICSFISKEFYDGKLLSGLTGKDRPMPPSSFPWPEAPSTSSSASAPR 1572
Query: 600 -FFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKL------ISMYPQLKSSSQLAIISPY 652
F G+E G S N ++ D + L S P+ + +A+++PY
Sbjct: 1573 MIFIECAGRED--LGHKSKSNKEQADLCHSICKLLRTSAAGSSTEPEANDDASIAVLTPY 1630
Query: 653 RHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRR 712
Q + + G+ + ++I+++DG QGRE D+ IF VR ++ + IGFL D RR
Sbjct: 1631 SRQSEVLKRLLS---GIPN---IEISSIDGFQGREADIVIFVTVRCNESREIGFLKDLRR 1684
Query: 713 MNVGITRAKSSILVVGCASTL 733
MNV +TRAK +++VG +TL
Sbjct: 1685 MNVALTRAKYGMIIVGNRATL 1705
>gi|159114110|ref|XP_001707280.1| Regulator of nonsense transcripts 1-like protein [Giardia lamblia
ATCC 50803]
gi|112735207|gb|ABI20695.1| UPF1 [Giardia intestinalis]
gi|157435384|gb|EDO79606.1| Regulator of nonsense transcripts 1-like protein [Giardia lamblia
ATCC 50803]
Length = 1304
Score = 162 bits (410), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 108/298 (36%), Positives = 164/298 (55%), Gaps = 18/298 (6%)
Query: 454 IRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFL 513
I + I++ A +V T S S LS+++ F +I+DE+ QA+EP TL + GC + L
Sbjct: 988 IENIIISSAKVVVCTCSTSYDNHLSRVH--FSSLIVDESTQAIEPDTLCAIGHGCSHIVL 1045
Query: 514 VGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDE 573
+GD QL V + +A H SL++RLQRAG L QYRMHP + +FPS FY+
Sbjct: 1046 MGDHKQLGPIVATNIARHSKLDLSLYERLQRAGIEPHSLTVQYRMHPALSAFPSNTFYNG 1105
Query: 574 ALEDGSDVEDYT------TRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINID-EVDFV 626
L++G D + D + SFF +G + G G+ + D E+ V
Sbjct: 1106 MLQNGVTQADRQLIPKPLSIDSFPWPIPSTPSFFWHVQG--THEIGHGTSLRNDTEILCV 1163
Query: 627 LLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGR 686
+ +L+ Y +LK S + I++PY +Q Q + + K+ E V + +VD QG
Sbjct: 1164 EAIVDQLLKCY-ELK-QSDIGIVTPYDYQKCQIEMQLKDAGYSE----VFVNSVDAFQGH 1217
Query: 687 EKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVK 744
EK+V IFS VR+ DK IGFL D RR+NVG+TR + ++++VG A+ L D W +L++
Sbjct: 1218 EKEVIIFSTVRSVDKH-IGFLKDQRRLNVGLTRCRCALIIVGNATALAIDSTWRSLIQ 1274
>gi|398347439|ref|ZP_10532142.1| DNA and RNA helicase [Leptospira broomii str. 5399]
Length = 627
Score = 162 bits (409), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 130/420 (30%), Positives = 205/420 (48%), Gaps = 72/420 (17%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAH--HSVNSVAID----- 427
+VLV AP+N+A D + L G+ +RIG A SV SV++D
Sbjct: 220 KVLVSAPTNAATDLLAESLGRMGV----------SALRIGHPARMSESVLSVSLDANLNR 269
Query: 428 ----HLVEQKRDD---------------------------SAADKQKHGATRKDRDSIRS 456
L+E+ + + A + + G + + +R
Sbjct: 270 HPDFKLIERDKREIGELLKKAGKYKRTFGREEAEERRRLYQEAKELRKGIKERQKVLVRY 329
Query: 457 AILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGD 516
+ + VIVC T + + S+LL KLN FD ++DE +QA EPA+ +P+ +++ + GD
Sbjct: 330 LLESHPVIVC-THTGASSSLLDKLN--FDYAVLDEGSQATEPASWIPILR-AERIVIAGD 385
Query: 517 PVQLPATVIS-------PVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSRE 569
P QLP TV+S P+ E L R+ G V +L TQYRM ++SFP+R
Sbjct: 386 PRQLPPTVLSEDPLLKIPLMERL------LDRMNSVGR-VYLLDTQYRMTDPIQSFPNRR 438
Query: 570 FYDEALEDGSDVEDYTTRDW-HEYRCF-GPFSFFDIHEGKESQPAGSGSWINIDEVDFVL 627
FY L G E+ +T + E F F F D + S N E +F +
Sbjct: 439 FYAGRLVSGIPEEERSTNPFPSETPLFDSSFVFIDTSGTDSGEELFDASLGNRWEAEFTI 498
Query: 628 LLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGRE 687
+ +++ S L +ISPYR+Q +E ++ ++ +K+ +I TVD QGRE
Sbjct: 499 TILKRILE---SGWSPEDLVLISPYRYQRFLLEEILRKELPIDVEKI-EIETVDSFQGRE 554
Query: 688 KDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAE 747
K IFS VR++ + +IGFL++ RR NVG+TRAK ++++G STL E + + +L++ AE
Sbjct: 555 KKGVIFSLVRSNSEGNIGFLSEERRWNVGMTRAKRLLVLIGDGSTLGEQEFFQDLIQEAE 614
>gi|156087819|ref|XP_001611316.1| regulator of nonsense transcripts [Babesia bovis T2Bo]
gi|154798570|gb|EDO07748.1| regulator of nonsense transcripts, putative [Babesia bovis]
Length = 1086
Score = 162 bits (409), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 116/384 (30%), Positives = 193/384 (50%), Gaps = 37/384 (9%)
Query: 370 RRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHL 429
R+ ++L A SN A D ++ L GI + +R+G + + ++
Sbjct: 683 RKTSEKILAVADSNVAADNLIEGLDRRGI----------QALRVGFGSESLLQEESLKRC 732
Query: 430 VEQKRDDSAADKQKHGATRKDRDSIRSAILNEAV----IVCSTLSFSGSALLSKLNHGFD 485
R + H K+ +S+R ++ +A+ ++ +T SG+ +L+ + F
Sbjct: 733 TRYGRYRYLRESGMH----KEANSMRVLMILDAIKTHQVIIATCVGSGNDVLA--GYSFP 786
Query: 486 VVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRA 545
VIIDE AQ++EP+ L+P+ GC+Q+ L+GD +QL T+IS A G +SL + L A
Sbjct: 787 YVIIDECAQSIEPSNLIPIGKGCRQLVLIGDHMQLRPTIISTEAASEGLSSSLLENLVNA 846
Query: 546 GY-PVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGP---FSFF 601
V +L Q RMHP + FP+ +FY + D +E+ + + P +F
Sbjct: 847 NVGKVHLLDVQRRMHPSISEFPNNQFYKGLITDA--IEENSRNPIKGFEWPSPAYNIAFI 904
Query: 602 DIHEGK-----ESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQV 656
D G ES S S N EV+ +L+L + S + I++ Y Q
Sbjct: 905 DASSGGPNGQFESVVGTSRS--NALEVEIILMLLKSFLDAGDV--RESDIGILTAYDAQK 960
Query: 657 KQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVG 716
Q + + + FG+ +Q ++I +VDG QG+EK++ +FS VR+++ K IGFL D RRMNV
Sbjct: 961 WQLRRKVNQMFGINAQ-AIEIDSVDGFQGKEKELILFSGVRSNNHKDIGFLKDPRRMNVM 1019
Query: 717 ITRAKSSILVVGCASTLRED-KHW 739
+TRA+ ++VV T+ D +W
Sbjct: 1020 LTRARRGLIVVADKFTIMNDISNW 1043
>gi|159475128|ref|XP_001695675.1| predicted protein [Chlamydomonas reinhardtii]
gi|158275686|gb|EDP01462.1| predicted protein [Chlamydomonas reinhardtii]
Length = 624
Score = 162 bits (409), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 134/448 (29%), Positives = 201/448 (44%), Gaps = 91/448 (20%)
Query: 376 VLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIG--LKAHHSVNSVAIDHLVE-- 431
+L A +N+A+D IV L+ G+R VR+G KA S+ +++ E
Sbjct: 13 LLAVADTNAAVDNIVGGLVARGVR----------CVRLGPAAKARESLRHFSLEAQAEAT 62
Query: 432 ------------------QKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSG 473
Q R+ A + A R++ + + V+VC T + +G
Sbjct: 63 PAGRKAAALRAAAVAKQEQLREADEARRDLEKAEGALREAAAAVVAGAEVVVC-TCTSAG 121
Query: 474 SALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLG 533
+LL + V++DEA+QA EP+ LV L G V + GDP QLP TV+S A G
Sbjct: 122 DSLLE--GRPWRCVVVDEASQATEPSVLVALTRGAAFVVMAGDPRQLPPTVLSDQALEAG 179
Query: 534 YGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYR 593
G +LF+R+ G +L TQYRMHP + +FPS FY L DG D +
Sbjct: 180 LGVTLFERVASGGVAPLLLDTQYRMHPLISAFPSAYFYGGKLRDGVAAADKPVPRGFAWP 239
Query: 594 CFG-PFSFFDIHEGKE-------------------------------------------S 609
G P + ++ G+E S
Sbjct: 240 KPGVPLALVEVRGGQEETSGDVSEAAATAAAAAATSASVLQPKGPAAAAAAAAKAQAAAS 299
Query: 610 QPAGSG---SWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVK----QFQER 662
P SG S+ N E L + KL++ S AI++PYR QV+ ++R
Sbjct: 300 GPPKSGDRSSYRNPAEALAALAVTQKLLAG----GDISSAAILTPYRGQVRLVEALLRQR 355
Query: 663 FKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKS 722
+ + + V ++TVDG QGRE DV +FS VRA+++ ++GFL+D RRMNV ITR +
Sbjct: 356 GLDAAWAAAGREVAVSTVDGYQGREADVVVFSAVRANERGAVGFLSDPRRMNVAITRPRR 415
Query: 723 SILVVGCASTL-REDKHWNNLVKSAEKQ 749
++V+ TL R + W +K A +Q
Sbjct: 416 GLVVLADGPTLSRGSRDWATYIKWARQQ 443
>gi|406836754|ref|ZP_11096348.1| AAA ATPase [Schlesneria paludicola DSM 18645]
Length = 628
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 139/439 (31%), Positives = 208/439 (47%), Gaps = 63/439 (14%)
Query: 355 PTTGNELKP-EVVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRI 413
P TG E++ + R +VL CA SN A+D ++ RL+ R+ IR P V
Sbjct: 203 PGTGKTTTVVELIRQAVRRGEKVLACAASNLAVDNLLERLVIA--RERVIRIGHPARVLP 260
Query: 414 GLKAHHSVNSVAIDHLVEQKRDDSAADKQKH-------------------GATRKDRDS- 453
L+ H +D +VE D A + GA R RD
Sbjct: 261 ELREH------TLDVMVESHPDLKLAREWTKEAWSLRRQAGKFTRTAPPPGARRDARDEA 314
Query: 454 ---IRSA----------ILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPAT 500
+R A +L+ A +VC+TL+ +L + FD+V+IDEAAQ+ EP
Sbjct: 315 KRLLRDARELESRLVEYLLDSAQVVCATLTGLNDEILGE--RQFDLVVIDEAAQSTEPPC 372
Query: 501 LVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRL-QRAGYPV-KMLKTQYRM 558
+PL K++ L GD QLP T+IS A G+ S+ +RL R G + + L TQYRM
Sbjct: 373 WIPLLR-SKRLVLAGDHCQLPPTIISHDARREGFQVSMMERLVSRWGDLIARRLDTQYRM 431
Query: 559 HPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYR----CFGPFSFFDI--HEGKESQPA 612
H + F S EFYD +L + V + D FFD + E
Sbjct: 432 HDRIMQFSSDEFYDSSLISANSVRAHRLADLPHVTDGELTQSSIRFFDTAGSDCVEQAEV 491
Query: 613 GSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQ 672
S N E +FV++ ++L++ + +++A+I+PY Q + + E GVE
Sbjct: 492 EGESRTNPGEAEFVVIKVNELLAAGVR---PTEIAVITPYSAQARLLRTLIAEA-GVE-- 545
Query: 673 KVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCAST 732
I TVDG QGREK+ + S VR++ K +GFL D RRMNV +TRA+ ++V G ++T
Sbjct: 546 ----IDTVDGFQGREKEAVVISLVRSNAKGELGFLTDTRRMNVALTRARRHLMVFGDSAT 601
Query: 733 LREDKHWNNLVKSAEKQDC 751
L + + ++ E+QD
Sbjct: 602 LANHEFYLRMLNYFERQDA 620
>gi|71660037|ref|XP_821737.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70887124|gb|EAN99886.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 2034
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 137/422 (32%), Positives = 204/422 (48%), Gaps = 56/422 (13%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQKR 434
RVLVCAPSN A+DE++LRL T R + +++R+G++ SV+ ++ L
Sbjct: 1551 RVLVCAPSNCAVDELLLRLRGTAKRVPQLGDL--QLLRVGVR--DSVDREVLESLPPLFF 1606
Query: 435 DD---------------SAADKQKHGA----TRKDRDSIRSAILNEAVIVCSTLSFSGSA 475
DD SA ++G+ +R +IR +L A +VCSTL GS
Sbjct: 1607 DDCVKALVDVSNTSHSISAGRMMRNGSGDVLKNSNRQNIRDHVLFGAHVVCSTL---GS- 1662
Query: 476 LLSKLNHG---FDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHL 532
LS+L FDVVI+DEA+Q EP L L K+ LVGD QL TV+ VA
Sbjct: 1663 -LSQLQRADFLFDVVIVDEASQGTEPDVLQALMLAKKRAVLVGDFRQLQPTVLCQVAAAR 1721
Query: 533 GYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEY 592
G SL +RL G+ L+ QYRMHP++ +FP+R FY + L + V RD
Sbjct: 1722 GLKRSLLQRLLHQGHRSYFLREQYRMHPDICAFPNRYFYGKRLLTHASVMAR-QRDGSSQ 1780
Query: 593 RCFGP--------FSFFDIHEGKESQPAGSGSWINIDEVDFVLL---LFHKLISMYPQLK 641
P F F D+ +G G S +N E + V+L F ++ + P+ +
Sbjct: 1781 ALPLPTDMGRVPRFVFVDVQDGLMEWGRGR-SLMNRQEAEAVVLQMRRFRAMLQLTPE-E 1838
Query: 642 SSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDK 701
+ + II+ Y+ Q + + + E + + ++TVD QG+EKD+ SCVRA
Sbjct: 1839 FARRTGIITFYQAQKEAILQLLLQE---ERRSELQVSTVDSFQGKEKDIIFISCVRALHP 1895
Query: 702 KS-------IGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQ-DCLF 753
S +GFL D+ R+NV +TRAK ++ G T R + + E+ C F
Sbjct: 1896 ASRLDGTAALGFLEDWHRINVSLTRAKEFCVLFGHKKTFRAAAAFKRQQRGVEEHSSCKF 1955
Query: 754 RV 755
+
Sbjct: 1956 EI 1957
>gi|300727419|ref|ZP_07060828.1| DNA helicase [Prevotella bryantii B14]
gi|299775299|gb|EFI71898.1| DNA helicase [Prevotella bryantii B14]
Length = 614
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 129/412 (31%), Positives = 195/412 (47%), Gaps = 44/412 (10%)
Query: 364 EVVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIR----------DENIRSYTPKIVRI 413
E +N + +VLVCA SN A+D I +L++ GI +E + S+T
Sbjct: 204 EAINETLMRENQVLVCAQSNMAVDWICEKLVDRGINVLRIGNPTKVNEQMLSFT---YER 260
Query: 414 GLKAHHSVNSV-----AIDHLVEQK--RDDSAADKQKHGATRKDRDSIR--SAILNEAVI 464
+AH + I L QK RDD K +H R IR + + EA +
Sbjct: 261 RFEAHPDYPQLWAIRKTIRQLRSQKKGRDDRYHQKLEHLKARATELEIRINTQLFGEARV 320
Query: 465 VCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATV 524
+ STL S + +L F + IDEAAQA+E A +P+ + V L GD QLP T+
Sbjct: 321 IASTLVGSANRILE--GQKFGTLFIDEAAQALEAACWIPMRRATR-VILAGDHCQLPPTI 377
Query: 525 ISPVAEHLGYGTSLFKRL-QRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVED 583
S A G G +L +R+ + V +LK QYRM+ ++ F S FY +E ++
Sbjct: 378 KSLAALKAGLGKTLMERIVENKPEVVTLLKVQYRMNEQIMQFSSNYFYHGEVETAPQIKY 437
Query: 584 YTTRDWHEYRCFGPFSFFDIHE---------GKESQPAGSGSWINIDEVDFVLLL---FH 631
D+ + P + D E KE + +N E + L +
Sbjct: 438 RGILDYED-----PMMWIDTSEIEVGPDEPSFKEQFIGENFGRVNKGEAELTLRTLEEYF 492
Query: 632 KLISMYPQLKSSSQLAIISPYRHQVKQFQERF-KETFGVESQKVVDITTVDGCQGREKDV 690
+ I L + + IISPYR QV+ ++ K F +K + + TVDG QG+E+D+
Sbjct: 493 QKIGKTRILDENIDVGIISPYRAQVQYLKKLIRKREFFKPYRKFISVNTVDGFQGQERDI 552
Query: 691 AIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNL 742
+ S VRA+D IGFL D RRMNV ITRA+ ++++G A T+ + ++ L
Sbjct: 553 ILISMVRANDDGQIGFLNDLRRMNVAITRARMKLIILGNAQTMSKHPFYHQL 604
>gi|10178000|dbj|BAB11373.1| unnamed protein product [Arabidopsis thaliana]
Length = 834
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 107/345 (31%), Positives = 174/345 (50%), Gaps = 17/345 (4%)
Query: 450 DRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLAT-GC 508
+ + IR L A I+ T S + +++ D++++DE AQ E ++ L G
Sbjct: 490 NNEDIRKFCLQNADIIFCTASSVANINPARIG-SVDLLVVDETAQLKECESVAALQLPGL 548
Query: 509 KQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSR 568
L+GD QLPA V + + +G SLF+RL G+ +L QYRMHP + FP++
Sbjct: 549 CHALLIGDEYQLPAMVHNEECDKAKFGRSLFERLVLIGHSKHLLNVQYRMHPSISRFPNK 608
Query: 569 EFYDEALEDGSDVED--YTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFV 626
EFY + D ++V++ Y R + + FG FSF ++ GKE G S N+ EV +
Sbjct: 609 EFYGGRITDAANVQESIYEKR-FLQGNMFGTFSFINVGRGKEEFGDGH-SPKNMVEVAVI 666
Query: 627 LLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFG---VESQKVVDITTVDGC 683
+ L + Q K + +ISPY+ QV+ QER + + V+ +++ +VDG
Sbjct: 667 SKIISNLFKVSSQRKQKMSVGVISPYKGQVRAIQERVGDKYNSLSVDQLFTLNVQSVDGF 726
Query: 684 QGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLR-EDKHWNNL 742
QG E DV I S VR + ++GFL++ +R NV +TRA+ + V+G +TL W L
Sbjct: 727 QGGEVDVIIISTVRCNVNGNVGFLSNRQRANVALTRARHCLWVIGNGTTLALSGSIWAEL 786
Query: 743 VKSAEKQDCLFRVSKPYASFFSDENLESMRKNATTDNVQGADGHV 787
+ + + C + D+NL +A D+V + G +
Sbjct: 787 ISESRTRGCFYDA-------VDDKNLRDAMSDALLDDVSSSFGSL 824
>gi|9758800|dbj|BAB09253.1| DNA helicase-like [Arabidopsis thaliana]
Length = 750
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 144/458 (31%), Positives = 218/458 (47%), Gaps = 73/458 (15%)
Query: 336 VGANPRDNIMPIDGDDGFFPTTGNELKPEVVNSSRRYRVRVLVCAPSNSALDEIVLRLLN 395
+G N + +M + G G T + EV+ + + RVLV AP+N+A+D +V +LL+
Sbjct: 286 LGVNKKRPVMIVQGPPG---TGKTGMLKEVITLAVQQGERVLVTAPTNAAVDNMVEKLLH 342
Query: 396 TGIRDENIRSYTPKIVRIGLKAHHS--VNSVAIDHLVEQKRDDSAAD-KQKHGATRKD-- 450
G+ IVR+G A S V S ++ +V K A+ ++K RKD
Sbjct: 343 LGL----------NIVRVGNPARISSAVASKSLGEIVNSKLASFRAELERKKSDLRKDLR 392
Query: 451 ---RDSIRSA-----------------------ILNEAVIVCSTLSFSGSALLSKLNHGF 484
RD + +A IL+ A +V +T + L+ +L F
Sbjct: 393 QCLRDDVLAAGIRQLLKQLGKTLKKKEKETVKEILSNAQVVFATNIGAADPLIRRLET-F 451
Query: 485 DVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQR 544
D+V+IDEA Q++EP+ +P+ G K+ L GDP QL V+S A G G SL +R
Sbjct: 452 DLVVIDEAGQSIEPSCWIPILQG-KRCILSGDPCQLAPVVLSRKALEGGLGVSLLERAAS 510
Query: 545 A--GYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRD-------WHEYRCF 595
G L TQYRM+ + + S+E Y L+ V + D W +C
Sbjct: 511 LHDGVLATKLTTQYRMNDVIAGWASKEMYGGWLKSAPSVASHLLIDSPFVKATWIT-QC- 568
Query: 596 GPFSFFD-------IHEGKESQ--PAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQL 646
P D + G E + PAG+GS N E D V+ + +IS+ S +
Sbjct: 569 -PLVLLDTRMPYGSLSVGCEERLDPAGTGSLYNEGEADIVV---NHVISLIYAGVSPMAI 624
Query: 647 AIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGF 706
A+ SPY QV+ +ER + F V V++ T+D QGRE D I S VR+++ ++GF
Sbjct: 625 AVQSPYVAQVQLLRERLDD-FPVADG--VEVATIDSFQGREADAVIISMVRSNNLGAVGF 681
Query: 707 LADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVK 744
L D RRMNV ITRA+ + VV +ST+ + L++
Sbjct: 682 LGDSRRMNVAITRARKHVAVVCDSSTICHNTFLARLLR 719
>gi|42566323|ref|NP_567301.2| DNA helicase domain-containing protein [Arabidopsis thaliana]
gi|332657133|gb|AEE82533.1| DNA helicase domain-containing protein [Arabidopsis thaliana]
Length = 689
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 101/289 (34%), Positives = 160/289 (55%), Gaps = 10/289 (3%)
Query: 451 RDSIRSAILNEA-VIVCSTLSFSGSALLSKLNHG-FDVVIIDEAAQAVEPATLVPLAT-G 507
++ IR+ L A +I C+ SG+A ++ G D++++DEAAQ E ++ L G
Sbjct: 399 KEDIRTFCLQNAHIIFCTA---SGAAEMTAERAGSIDMLVVDEAAQLKECESVAALQLQG 455
Query: 508 CKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPS 567
L+GD +QLPA V S V E + SLF+RL G+ +L QYRMHP + FP+
Sbjct: 456 LHHAVLIGDELQLPAMVQSEVCEKAKFVRSLFERLDSLGHKKHLLNVQYRMHPSISLFPN 515
Query: 568 REFYDEALEDGSDVEDYT-TRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFV 626
EFY + D V++ T + + + FG FSF ++ GKE G S N+ E+ V
Sbjct: 516 MEFYGGKISDAEIVKESTYQKRFLQGNMFGSFSFINVGLGKEEFGDGH-SPKNMVEIAVV 574
Query: 627 LLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKV--VDITTVDGCQ 684
+ L+ + + K+ + +ISPY+ QV QER + + S + +++ +VDG Q
Sbjct: 575 SEILTNLLKVSSETKTKMSVGVISPYKAQVSAIQERIGDKYTSVSDNLFTLNVRSVDGFQ 634
Query: 685 GREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTL 733
G E+D+ I S VR++ +IGFL++ +R NV +TRA+ + V+G TL
Sbjct: 635 GGEEDIIIISTVRSNCNGNIGFLSNRQRANVALTRARHCLWVIGNERTL 683
>gi|15240130|ref|NP_198532.1| tRNA-splicing endonuclease positive effector-related protein
[Arabidopsis thaliana]
gi|332006765|gb|AED94148.1| tRNA-splicing endonuclease positive effector-related protein
[Arabidopsis thaliana]
Length = 871
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 107/345 (31%), Positives = 174/345 (50%), Gaps = 17/345 (4%)
Query: 450 DRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLAT-GC 508
+ + IR L A I+ T S + +++ D++++DE AQ E ++ L G
Sbjct: 527 NNEDIRKFCLQNADIIFCTASSVANINPARIG-SVDLLVVDETAQLKECESVAALQLPGL 585
Query: 509 KQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSR 568
L+GD QLPA V + + +G SLF+RL G+ +L QYRMHP + FP++
Sbjct: 586 CHALLIGDEYQLPAMVHNEECDKAKFGRSLFERLVLIGHSKHLLNVQYRMHPSISRFPNK 645
Query: 569 EFYDEALEDGSDVED--YTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFV 626
EFY + D ++V++ Y R + + FG FSF ++ GKE G S N+ EV +
Sbjct: 646 EFYGGRITDAANVQESIYEKR-FLQGNMFGTFSFINVGRGKEEFGDGH-SPKNMVEVAVI 703
Query: 627 LLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFG---VESQKVVDITTVDGC 683
+ L + Q K + +ISPY+ QV+ QER + + V+ +++ +VDG
Sbjct: 704 SKIISNLFKVSSQRKQKMSVGVISPYKGQVRAIQERVGDKYNSLSVDQLFTLNVQSVDGF 763
Query: 684 QGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLR-EDKHWNNL 742
QG E DV I S VR + ++GFL++ +R NV +TRA+ + V+G +TL W L
Sbjct: 764 QGGEVDVIIISTVRCNVNGNVGFLSNRQRANVALTRARHCLWVIGNGTTLALSGSIWAEL 823
Query: 743 VKSAEKQDCLFRVSKPYASFFSDENLESMRKNATTDNVQGADGHV 787
+ + + C + D+NL +A D+V + G +
Sbjct: 824 ISESRTRGCFYDA-------VDDKNLRDAMSDALLDDVSSSFGSL 861
>gi|41053136|dbj|BAD08079.1| putative DNA helicase [Oryza sativa Japonica Group]
Length = 794
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 142/446 (31%), Positives = 213/446 (47%), Gaps = 71/446 (15%)
Query: 336 VGANPRDNIMPIDGDDGFFPTTGNELKPEVVNSSRRYRVRVLVCAPSNSALDEIVLRLLN 395
+G N + ++ I G G T L E++ + + VLV APSN+A+D +V RL N
Sbjct: 328 LGLNKKRPVLIIQGPPGTGKTV---LLTELIVRAVQQGENVLVTAPSNAAVDNMVERLSN 384
Query: 396 TGIRDENIRSYTPKIVRIGLKAH--HSVNSVAIDHLV-----------EQKR-------- 434
TG+ IVR+G A SV S ++ +V E+KR
Sbjct: 385 TGL----------NIVRVGNPARISPSVASKSLAEIVNGRLEQFRKELERKRSDLRKDLS 434
Query: 435 ----DDSAADKQKH-------GATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHG 483
DDS A + +K+++ IR A L+EA +V ST + + L+ +
Sbjct: 435 YCIEDDSLAAGIRQLLKQLGRDLEKKEKEMIREA-LSEAQVVLSTNTGAADPLIRR-TCC 492
Query: 484 FDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQ 543
FD+VIIDEA QA+EP+ +P+ G K+ L GD QL ++S A G G SL +R
Sbjct: 493 FDLVIIDEAGQAIEPSCWIPILQG-KRCILAGDHCQLAPVILSRKALDGGLGKSLLERAS 551
Query: 544 --RAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRD-------WHEYRC 594
G L Q+RM+ + S+ S+E Y L+ V T D W RC
Sbjct: 552 SLHNGLLTTRLTVQHRMNDSIASWASKEMYHGLLKSSHSVASQTLADSPVVKATWIT-RC 610
Query: 595 -------FGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLA 647
P+ D G++ +G+GS+ N E D V ++++ S + +A
Sbjct: 611 PLLLLDTRMPYGALDTGCGEQIDLSGTGSFYNDGEADIV---TQHVLNLVHCGVSPTAIA 667
Query: 648 IISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFL 707
+ SPY QV+ +ER +E G+ V+++T+D QGRE D + S VR++ ++GFL
Sbjct: 668 VQSPYIAQVQLLRERLEEYPGLSG---VEVSTIDSFQGREADAVVISMVRSNPLGAVGFL 724
Query: 708 ADYRRMNVGITRAKSSILVVGCASTL 733
D RRMNV ITRA + VV ST+
Sbjct: 725 GDSRRMNVAITRACRHVTVVCDTSTI 750
>gi|183233537|ref|XP_654409.2| regulator of nonsense transcripts [Entamoeba histolytica HM-1:IMSS]
gi|169801534|gb|EAL49041.2| regulator of nonsense transcripts, putative [Entamoeba histolytica
HM-1:IMSS]
Length = 979
Score = 161 bits (407), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/322 (33%), Positives = 169/322 (52%), Gaps = 24/322 (7%)
Query: 458 ILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDP 517
IL+ VCSTL+ +++ L F I+DEAAQ++EP TL + ++ L+GD
Sbjct: 622 ILSGIECVCSTLTICTRSIM--LKQKFFASIVDEAAQSLEPETLAGII-NVRKTVLIGDI 678
Query: 518 VQLPATVISPVAEHLGYGTSLFKRLQRAGYPVK--MLKTQYRMHPEVRSFPSREFYDEAL 575
QL T +S A G+ S+F+R A +K MLKTQYRMHP + F ++ FY L
Sbjct: 679 QQLQPTCLSTEAREAGFQKSMFERFM-ANTQIKRTMLKTQYRMHPAISEFSNKMFYSSKL 737
Query: 576 EDG--SD--VEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFH 631
E+G SD +D + +Y P F + +G E + S+ N EV + +
Sbjct: 738 ENGVSSDDRFDDRIINFFPDYT--NPIMFINC-DGTEHYGSSGTSYNNAGEVQIIQEVVE 794
Query: 632 KLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVA 691
KL++ + +++ IISPY+ Q QE + + + + +DG QG EK+
Sbjct: 795 KLLNNDIE---ENEIGIISPYQAQ----QELISQYVSTK----IKVANIDGFQGNEKEYI 843
Query: 692 IFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDC 751
IFSCVR++ +GF+ DY+R+NV +TRAKS ++++G TL K WN L+ +D
Sbjct: 844 IFSCVRSNQTLGVGFVNDYKRLNVALTRAKSGLIIIGNIPTLITSKVWNMLIHQFYLRDA 903
Query: 752 LFRVSKPYASFFSDENLESMRK 773
LF + + ++ EN E +
Sbjct: 904 LFELKEHDFVQYNVENQEEFNR 925
>gi|390945185|ref|YP_006408946.1| type III restriction enzyme, res subunit [Belliella baltica DSM
15883]
gi|390418613|gb|AFL86191.1| Type III restriction enzyme, res subunit [Belliella baltica DSM
15883]
Length = 643
Score = 161 bits (407), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 143/500 (28%), Positives = 235/500 (47%), Gaps = 57/500 (11%)
Query: 293 LSAILHATPARVHSKGGLREIKRGPELPMHEK--YNHWGRASPW----LVGANPRDNIMP 346
+ A++ A R+ G L+ I G LP + Y+ +P L N D++
Sbjct: 146 MKAVIKADKGRL---GELKSILLGETLPSFSQKVYHDLQELNPAQNQALRLINQSDDVAI 202
Query: 347 IDGDDGFFPTTGNELKPEVVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGI-------- 398
I G G TT L + N + R +VLVCAPSN+A+D +V +L++ G+
Sbjct: 203 IHGPPGTGKTT--TLIAAIQNILKTNR-QVLVCAPSNAAVDLLVEKLVDKGVPTLRIGHP 259
Query: 399 -----------RDENIRSYTP----KIVRIGLKAHHSVNSVAIDHLVEQKRDDSAADKQK 443
D I S+ K +R + + + + ++R +
Sbjct: 260 ARVDDKILAQTLDAKIASHESYKDLKKLRKSVDEYRKLGRKYKRNFGHEERVQRKRLLDE 319
Query: 444 HGATRKDRDSIRSAILNEAV----IVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPA 499
G ++D D + + I+ + + STL S + L ++ F V IDEA Q +E A
Sbjct: 320 AGRMKEDADILENYIMYDVFQMTQVFASTLVGSSNQALKGID--FPYVFIDEAGQGLEAA 377
Query: 500 TLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKR-LQRAGYPVKMLKTQYRM 558
T +P+ ++V + GD +QLP T+ S A G +LF++ ++R KML QYRM
Sbjct: 378 TWIPIMK-AEKVVMTGDHLQLPPTIKSYEAAKAGLSETLFEKVIKRQPEASKMLTVQYRM 436
Query: 559 HPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCF--GPFSFFDIHEGKESQPAGSGS 616
++ F S+ FY LE + + + F S F H+ KES S
Sbjct: 437 PEKIMGFSSKLFYKNNLEAAVNTHIHFLTEEESVLEFIDTAGSGFSEHQEKESL-----S 491
Query: 617 WINIDEVDFVLLLFHKLISMYPQLKSSSQ---LAIISPYRHQVKQFQERFKETFGVES-- 671
+N +E F L L+ K ++ + +ISPYR QV++FQE E++ +
Sbjct: 492 TLNAEEAKFTLKYLENLLKRVGIGKIKTEGWNIGLISPYRAQVRKFQELIFESYEYPNLR 551
Query: 672 --QKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGC 729
+++ I ++DG QG+E+D+ S VR++ IGFL+D RRMNV +TRAK ++V+G
Sbjct: 552 SFSELLTIDSIDGFQGQERDIIFISLVRSNANGEIGFLSDTRRMNVALTRAKRKLVVIGD 611
Query: 730 ASTLREDKHWNNLVKSAEKQ 749
+STL + +N + E++
Sbjct: 612 SSTLSSNDFYNAFLNYVEEK 631
>gi|294936357|ref|XP_002781732.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239892654|gb|EER13527.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 503
Score = 161 bits (407), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 133/412 (32%), Positives = 191/412 (46%), Gaps = 50/412 (12%)
Query: 361 LKPEVVNS-SRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHH 419
+K VVN + R +VLV A SN+A D NIR +V+ G++ +
Sbjct: 103 VKHWVVNKITARGEGKVLVVADSNAAAD--------------NIRGL---MVKAGIECYR 145
Query: 420 SVNSVAIDHLVEQKRDDSAADKQKHGATRKDRDSIRSAIL------------------NE 461
+ D + DD +K TR RD R+ IL +E
Sbjct: 146 VGRAQETDGGTREVSDDVL---RKLEGTRAVRDYRRAVILGDIHKLPYFRQRIDKAAVDE 202
Query: 462 AVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLP 521
++ +T SG LL ++ F+ VIIDE QA EPA+LVPLA G K+ L+GD QLP
Sbjct: 203 YQVLVATCIGSGHQLLDSVD--FESVIIDECTQATEPASLVPLARGAKRCVLLGDHKQLP 260
Query: 522 ATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALE-DGSD 580
ATV A+ G G SLF+RL +G PV +L Q RMHP + F + FYD ++ + SD
Sbjct: 261 ATVHCNTAKSGGLGISLFERLAMSGTPVHLLDIQRRMHPSIAEFSNHHFYDNRIKHEVSD 320
Query: 581 VEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQL 640
W + + D + + S +N +E LL L
Sbjct: 321 RPLIPGLRWPNPQIR--VALVDTSQLIAGESKVGTSLMNREEAR---LLLDALYDAVANG 375
Query: 641 KSSSQLAIISPYRHQVKQFQERFKE--TFGVESQKVVDITTVDGCQGREKDVAIFSCVRA 698
Q+ ++ PY Q KE F E + V I TVDG QG EK++ FS VR+
Sbjct: 376 TPPGQIGLVVPYNAQKSHVIAALKEDTRFSPEQRAAVQINTVDGFQGHEKELIFFSAVRS 435
Query: 699 SDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLR-EDKHWNNLVKSAEKQ 749
+ +GF+AD RRMNV +TRA+ ++V +T+ HW + V+ E++
Sbjct: 436 NVSGQVGFIADPRRMNVMLTRARRGLVVFCDVNTMTASGGHWRSWVEWIERK 487
>gi|30692868|ref|NP_198446.3| putative DNA-binding protein [Arabidopsis thaliana]
gi|332006651|gb|AED94034.1| putative DNA-binding protein [Arabidopsis thaliana]
Length = 961
Score = 161 bits (407), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 144/458 (31%), Positives = 218/458 (47%), Gaps = 73/458 (15%)
Query: 336 VGANPRDNIMPIDGDDGFFPTTGNELKPEVVNSSRRYRVRVLVCAPSNSALDEIVLRLLN 395
+G N + +M + G G T + EV+ + + RVLV AP+N+A+D +V +LL+
Sbjct: 497 LGVNKKRPVMIVQGPPG---TGKTGMLKEVITLAVQQGERVLVTAPTNAAVDNMVEKLLH 553
Query: 396 TGIRDENIRSYTPKIVRIGLKAHHS--VNSVAIDHLVEQKRDDSAAD-KQKHGATRKD-- 450
G+ IVR+G A S V S ++ +V K A+ ++K RKD
Sbjct: 554 LGL----------NIVRVGNPARISSAVASKSLGEIVNSKLASFRAELERKKSDLRKDLR 603
Query: 451 ---RDSIRSA-----------------------ILNEAVIVCSTLSFSGSALLSKLNHGF 484
RD + +A IL+ A +V +T + L+ +L F
Sbjct: 604 QCLRDDVLAAGIRQLLKQLGKTLKKKEKETVKEILSNAQVVFATNIGAADPLIRRL-ETF 662
Query: 485 DVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQR 544
D+V+IDEA Q++EP+ +P+ G K+ L GDP QL V+S A G G SL +R
Sbjct: 663 DLVVIDEAGQSIEPSCWIPILQG-KRCILSGDPCQLAPVVLSRKALEGGLGVSLLERAAS 721
Query: 545 A--GYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRD-------WHEYRCF 595
G L TQYRM+ + + S+E Y L+ V + D W +C
Sbjct: 722 LHDGVLATKLTTQYRMNDVIAGWASKEMYGGWLKSAPSVASHLLIDSPFVKATWIT-QC- 779
Query: 596 GPFSFFD-------IHEGKESQ--PAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQL 646
P D + G E + PAG+GS N E D V+ + +IS+ S +
Sbjct: 780 -PLVLLDTRMPYGSLSVGCEERLDPAGTGSLYNEGEADIVV---NHVISLIYAGVSPMAI 835
Query: 647 AIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGF 706
A+ SPY QV+ +ER + F V V++ T+D QGRE D I S VR+++ ++GF
Sbjct: 836 AVQSPYVAQVQLLRERLDD-FPVADG--VEVATIDSFQGREADAVIISMVRSNNLGAVGF 892
Query: 707 LADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVK 744
L D RRMNV ITRA+ + VV +ST+ + L++
Sbjct: 893 LGDSRRMNVAITRARKHVAVVCDSSTICHNTFLARLLR 930
>gi|345326820|ref|XP_001507391.2| PREDICTED: hypothetical protein LOC100075941 [Ornithorhynchus
anatinus]
Length = 1891
Score = 161 bits (407), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 121/391 (30%), Positives = 195/391 (49%), Gaps = 41/391 (10%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTG----IRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLV 430
++L+ + +N A+D ++L LL+ G IR +IR I+ L A + + L
Sbjct: 1472 KILISSSTNVAVDRVLLVLLSLGFEKFIRVGSIRKIAKPILPYSLHAGSGNENEQLKELH 1531
Query: 431 EQKRDDSAA----------DKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKL 480
++D A +K K G R+ +L + +V +T + ++ L
Sbjct: 1532 ALMKEDLTAVERVYIRKSIEKHKLGTNRE--------LLKQVRVVGATCAACPFPCMNNL 1583
Query: 481 NHGFDVVIIDEAAQAVEPATLVPLAT-GCKQVFLVGDPVQLPATVI-SPVAEHLGYGTSL 538
F VVI+DE +Q EPA+L+P+A C+++ LVGDP QLP T+ S A G +L
Sbjct: 1584 K--FPVVILDECSQITEPASLLPIARFECEKLVLVGDPKQLPPTIQGSDCAHDNGLEQTL 1641
Query: 539 FKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR-DWHEYRCFGP 597
F RL G+ +L+TQYR HP + + + FY+ L DG D + DW CF
Sbjct: 1642 FDRLCTMGHHAVLLRTQYRCHPAISAIANDLFYEGNLIDGISERDRSPLLDWLPTLCF-- 1699
Query: 598 FSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVK 657
++++ G E Q S+ N+ E F L L LI+ + +S + +I+ Y+ Q+
Sbjct: 1700 ---YNVN-GTE-QIGRDNSFHNLAEAAFTLKLIQSLIASGIE---ASAIGVITLYKSQMN 1751
Query: 658 QFQERFKETFG-VESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVG 716
Q F + K V ++TVD QG EK+V + SCVR + GF+ RR NV
Sbjct: 1752 QLCNLFSAGHSDYPNIKAVQVSTVDAFQGAEKEVIVLSCVRT---RQFGFIDSERRTNVA 1808
Query: 717 ITRAKSSILVVGCASTLREDKHWNNLVKSAE 747
+TR K +L+VG + L++++ W N+++ E
Sbjct: 1809 LTRGKRHLLIVGNVACLKKNRLWGNVIQHCE 1839
>gi|297809575|ref|XP_002872671.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297318508|gb|EFH48930.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 815
Score = 161 bits (407), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 100/289 (34%), Positives = 158/289 (54%), Gaps = 9/289 (3%)
Query: 450 DRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHG-FDVVIIDEAAQAVEPATLVPLAT-G 507
+ D+ + N +I C+ SG+A ++ G +++++DEAAQ E ++ L G
Sbjct: 521 NEDTRTFCLQNAHIIFCTA---SGAAEMTAERTGSIELLVVDEAAQLKECESVAALQIQG 577
Query: 508 CKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPS 567
L+GD +QLPA V S V E +G SLF+RL G+ +L QYRMH + FP+
Sbjct: 578 LHHAVLIGDELQLPAMVQSEVCEKAKFGRSLFERLVLLGHKKHLLNVQYRMHTSISLFPN 637
Query: 568 REFYDEALEDGSDVEDYT-TRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFV 626
EFYD + D V++ T + + FG FSF ++ GKE G S N+ EV V
Sbjct: 638 MEFYDGKISDAEIVKESTYQKRFLRGNMFGSFSFINVGLGKEEFGDGH-SPKNMVEVAVV 696
Query: 627 LLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKV--VDITTVDGCQ 684
+ L+ + + K+ + +ISPY+ QV+ QER + + S ++ +++ +VDG Q
Sbjct: 697 SEILSNLLKVSSEAKTKMSVGVISPYKAQVRAIQERIGDKYTSVSDQLFTLNVRSVDGFQ 756
Query: 685 GREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTL 733
G E+D+ I S VR + IGFL++ +R NV +TRA+ + V+G TL
Sbjct: 757 GGEEDIIIISTVRNNGNGHIGFLSNRQRANVALTRARHCLWVIGNERTL 805
Score = 43.5 bits (101), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 120/281 (42%), Gaps = 59/281 (20%)
Query: 51 LREVKDTYKDVDDYLATFEPLLFEEVKAQIIQKKDEEEVQEWKLRLVMECGEADGFHLPS 110
++ + D + VD+YL F PLL EE + ++ + WK A F++ S
Sbjct: 31 IKSIPDRFWSVDEYLNCFVPLLLEETRTELSSSLN----SLWK---------APVFYISS 77
Query: 111 VTYEADEVESISPNDLLLLSKEEFKEGSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHI 170
V A ++ S S N + + +G+ T+Y +H G++I +
Sbjct: 78 VEATAIKLPSRSSNKVNISGLTSVAQGNR--TSYE---PKH-------------GDLIAL 119
Query: 171 NKDAVKSQRLLNIHSLITSSVSAVEKRL---------------FSLK----ICSLSTIAR 211
K A + R+ +++ LI V +VE L FS + + +L+T R
Sbjct: 120 TK-AARPTRVDDLNPLILGYVFSVEDELHFSVHSSKTISIDEQFSFRSGVFLMNLTTNTR 178
Query: 212 EYLALRSV-GSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIKENH-NASQLEAIHEGL 269
+ AL + G+L +L A+ + S + + ++ N SQ AI L
Sbjct: 179 IWKALHNGDGNLGLIKSVLQANTADTEHPVSSRNWGNSVWDIMRSAKLNPSQESAILSCL 238
Query: 270 ----LR--KAFVLIQGPPGTGKTQTILGLLSAILHATPARV 304
LR + LI GPPGTGKT+T+ LL A+L+ + V
Sbjct: 239 ETRNLRDKTSVKLIWGPPGTGKTKTVATLLFALLNLSCKTV 279
>gi|410099466|ref|ZP_11294437.1| hypothetical protein HMPREF1076_03615 [Parabacteroides goldsteinii
CL02T12C30]
gi|409218937|gb|EKN11903.1| hypothetical protein HMPREF1076_03615 [Parabacteroides goldsteinii
CL02T12C30]
Length = 647
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 133/412 (32%), Positives = 206/412 (50%), Gaps = 65/412 (15%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIG--LKAHHSVNSVAIDHLVEQ 432
+V+VCA SN+A+D I +L++ GI ++RIG + + + S + E
Sbjct: 235 QVMVCAQSNTAVDWISEKLVDRGI----------NVLRIGNPTRVNDKMLSFTYERRFES 284
Query: 433 KRD--------------DSAADKQKHGA--TRKDRDS------------IRSAILNEAVI 464
D S+ K+ H T ++R S I + + +EA +
Sbjct: 285 HPDYSELWGIRKAIREIQSSFRKKSHSEKDTARNRLSRLRFRATELEVQIDADLFSEARV 344
Query: 465 VCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATV 524
+ TL S + +L+ NH F + IDEAAQA+E A + ++ +V L GD QLP T+
Sbjct: 345 IACTLVGSANRVLT--NHNFTTLFIDEAAQALEAACWIAISKA-DRVILAGDHHQLPPTI 401
Query: 525 ISPVAEHLGYGTSLFKRLQRAGYP--VKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVE 582
A G +L +++ AG P V +LK QYRMH ++ F SR FY + L+ +V+
Sbjct: 402 KCIEATRGGLDRTLMQKVA-AGKPETVSLLKVQYRMHEDIMRFSSRWFYQDELQAAPEVK 460
Query: 583 DYTTRDWHEYRCF----GPFSFFDIHEG--KESQPAGSGSWINIDEVDFV---LLLFHKL 633
YR P +FD + +E Q + S S IN E + + L + +
Sbjct: 461 ---------YRGILAYDTPVVWFDTADCDFEEDQLSESQSRINKKEAELLVEQLQAYIEK 511
Query: 634 ISMYPQLKSSSQLAIISPYRHQVKQFQERFKE-TFGVESQKVVDITTVDGCQGREKDVAI 692
IS L S +ISPY+ QV+ + K +F +K++ + TVDG QG+E+DV +
Sbjct: 512 ISKERVLDESIDFGLISPYKSQVQYIRGLIKRNSFFKPFRKLITVHTVDGFQGQERDVIM 571
Query: 693 FSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVK 744
S VRA+D+ +IGFL D RRMNV ITRA+ ++++G ASTL + + L K
Sbjct: 572 ISLVRANDQGNIGFLNDLRRMNVAITRARMKLIILGDASTLTKHTFYRELYK 623
>gi|115453945|ref|NP_001050573.1| Os03g0586900 [Oryza sativa Japonica Group]
gi|50399951|gb|AAT76339.1| putative DNA helicase [Oryza sativa Japonica Group]
gi|108709563|gb|ABF97358.1| DNA helicase family protein, expressed [Oryza sativa Japonica
Group]
gi|113549044|dbj|BAF12487.1| Os03g0586900 [Oryza sativa Japonica Group]
gi|215704640|dbj|BAG94268.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218193224|gb|EEC75651.1| hypothetical protein OsI_12407 [Oryza sativa Indica Group]
gi|222625290|gb|EEE59422.1| hypothetical protein OsJ_11580 [Oryza sativa Japonica Group]
Length = 651
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 135/409 (33%), Positives = 201/409 (49%), Gaps = 59/409 (14%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIG------------------LK 416
++L CA SN A+D IV RL Y K+VR+G L+
Sbjct: 247 KILACAASNIAVDNIVERL----------SRYRTKLVRLGHPARLLPQVLDSALDAQVLR 296
Query: 417 AHHSVNSVAIDHLVEQKRDDSAADKQKHGATRKD-RDSIRSA--------------ILNE 461
A +S S+A D E K +S K K T++D R +R+ ++
Sbjct: 297 ADNS--SLAGDIRKEMKVLNSKLLKAKDKNTKRDIRKELRTLAKEERKRQQLAVADVIKN 354
Query: 462 AVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLP 521
A +V STL+ + S L + FD+VIIDEAAQA+E A + L G + V L GD +QLP
Sbjct: 355 ADVVLSTLTGASSKKLDGIT--FDLVIIDEAAQALEMACWIALLKGPRCV-LAGDHLQLP 411
Query: 522 ATVISPVAEHLGYGTSLFKRLQRA--GYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGS 579
T+ S AE G G +LF+RL A ML QYRMH + ++ S+E Y+ ++ S
Sbjct: 412 PTIQSAEAEKKGMGKTLFERLTEAYGDQITSMLTIQYRMHELIMNWSSKELYNNKIKAHS 471
Query: 580 DVEDYTTRDWHEYR---CFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISM 636
V D+ D E + P G + + ++E + + + H + +
Sbjct: 472 SVADHMLYDIEEVKRSSSTEPTIILIDTTGCDMEEVKDEEESTMNEGEAAVSIAHAKLLV 531
Query: 637 YPQLKSSSQLAIISPYRHQVKQFQE-RFKETFGVESQKVVDITTVDGCQGREKDVAIFSC 695
+++S + II+PY QV + R K+T K ++I+TVDG QGREK+ I S
Sbjct: 532 ESGVRAS-DIGIITPYAAQVTCLKMMRNKDT----KLKDLEISTVDGFQGREKEAIIISM 586
Query: 696 VRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVK 744
VR++ KK +GFL+D+RRMNV +TRA+ +V T+ DK LV+
Sbjct: 587 VRSNSKKEVGFLSDHRRMNVAVTRARRQCCLVCDVETVSNDKFLKRLVE 635
>gi|222623514|gb|EEE57646.1| hypothetical protein OsJ_08074 [Oryza sativa Japonica Group]
Length = 980
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 142/446 (31%), Positives = 213/446 (47%), Gaps = 71/446 (15%)
Query: 336 VGANPRDNIMPIDGDDGFFPTTGNELKPEVVNSSRRYRVRVLVCAPSNSALDEIVLRLLN 395
+G N + ++ I G G T L E++ + + VLV APSN+A+D +V RL N
Sbjct: 514 LGLNKKRPVLIIQGPPGTGKTV---LLTELIVRAVQQGENVLVTAPSNAAVDNMVERLSN 570
Query: 396 TGIRDENIRSYTPKIVRIGLKAH--HSVNSVAIDHLV-----------EQKR-------- 434
TG+ IVR+G A SV S ++ +V E+KR
Sbjct: 571 TGL----------NIVRVGNPARISPSVASKSLAEIVNGRLEQFRKELERKRSDLRKDLS 620
Query: 435 ----DDSAADKQKH-------GATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHG 483
DDS A + +K+++ IR A L+EA +V ST + + L+ +
Sbjct: 621 YCIEDDSLAAGIRQLLKQLGRDLEKKEKEMIREA-LSEAQVVLSTNTGAADPLIRR-TCC 678
Query: 484 FDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQ 543
FD+VIIDEA QA+EP+ +P+ G K+ L GD QL ++S A G G SL +R
Sbjct: 679 FDLVIIDEAGQAIEPSCWIPILQG-KRCILAGDHCQLAPVILSRKALDGGLGKSLLERAS 737
Query: 544 --RAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRD-------WHEYRC 594
G L Q+RM+ + S+ S+E Y L+ V T D W RC
Sbjct: 738 SLHNGLLTTRLTVQHRMNDSIASWASKEMYHGLLKSSHSVASQTLADSPVVKATWIT-RC 796
Query: 595 -------FGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLA 647
P+ D G++ +G+GS+ N E D V ++++ S + +A
Sbjct: 797 PLLLLDTRMPYGALDTGCGEQIDLSGTGSFYNDGEADIV---TQHVLNLVHCGVSPTAIA 853
Query: 648 IISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFL 707
+ SPY QV+ +ER +E G+ V+++T+D QGRE D + S VR++ ++GFL
Sbjct: 854 VQSPYIAQVQLLRERLEEYPGLSG---VEVSTIDSFQGREADAVVISMVRSNPLGAVGFL 910
Query: 708 ADYRRMNVGITRAKSSILVVGCASTL 733
D RRMNV ITRA + VV ST+
Sbjct: 911 GDSRRMNVAITRACRHVTVVCDTSTI 936
>gi|359473527|ref|XP_002263192.2| PREDICTED: uncharacterized protein LOC100243095 [Vitis vinifera]
Length = 2788
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 101/296 (34%), Positives = 158/296 (53%), Gaps = 8/296 (2%)
Query: 462 AVIVCSTLSFSGSALLSKLNHG-FDVVIIDEAAQAVEPATLVPLAT-GCKQVFLVGDPVQ 519
++I C+ S S L ++N D+++IDEAAQ E +++PL + L+GD Q
Sbjct: 570 SLIFCTA---SSSYQLYRVNMKPLDLLVIDEAAQLKECESVIPLQLPDIRHAILIGDECQ 626
Query: 520 LPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGS 579
LPA V S V++ G+G SLF+RL G+ +L QYRMHP + FP+ +FY + D
Sbjct: 627 LPAMVSSKVSKEAGFGRSLFERLSSLGHFKHLLNVQYRMHPSISFFPNSKFYFNQILDAP 686
Query: 580 DVEDYT-TRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYP 638
+V+ + T+ + FG +SF ++ GKE S N+ EV V+ + L +
Sbjct: 687 NVKSKSYTKHYLSGPMFGSYSFINVR-GKEEHDDVGKSRKNMIEVAIVIKIVGNLYKEWS 745
Query: 639 QLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRA 698
+ +ISPY QV Q+ E + V + TVDG Q E+D+ I S VRA
Sbjct: 746 GSNQKLSIGVISPYAAQVVAVQDNLGEKYENLDNFAVKVKTVDGFQAGEEDIIIMSTVRA 805
Query: 699 SDKKSIGFLADYRRMNVGITRAKSSILVVGCASTL-REDKHWNNLVKSAEKQDCLF 753
+ SIGFL++ +R NV +TRA+ + ++G TL + + W +LV A+++ F
Sbjct: 806 NSHGSIGFLSNPQRTNVALTRARHCLWILGNERTLAKSESVWEDLVCDAKRRKRFF 861
>gi|5732068|gb|AAD48967.1|AF147263_9 contains similarity to nonsense-mediated mRNA decay trans-acting
factors [Arabidopsis thaliana]
gi|7267314|emb|CAB81096.1| AT4g05540 [Arabidopsis thaliana]
Length = 660
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 101/289 (34%), Positives = 160/289 (55%), Gaps = 10/289 (3%)
Query: 451 RDSIRSAILNEA-VIVCSTLSFSGSALLSKLNHG-FDVVIIDEAAQAVEPATLVPLAT-G 507
++ IR+ L A +I C+ SG+A ++ G D++++DEAAQ E ++ L G
Sbjct: 370 KEDIRTFCLQNAHIIFCTA---SGAAEMTAERAGSIDMLVVDEAAQLKECESVAALQLQG 426
Query: 508 CKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPS 567
L+GD +QLPA V S V E + SLF+RL G+ +L QYRMHP + FP+
Sbjct: 427 LHHAVLIGDELQLPAMVQSEVCEKAKFVRSLFERLDSLGHKKHLLNVQYRMHPSISLFPN 486
Query: 568 REFYDEALEDGSDVEDYT-TRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFV 626
EFY + D V++ T + + + FG FSF ++ GKE G S N+ E+ V
Sbjct: 487 MEFYGGKISDAEIVKESTYQKRFLQGNMFGSFSFINVGLGKEEFGDGH-SPKNMVEIAVV 545
Query: 627 LLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKV--VDITTVDGCQ 684
+ L+ + + K+ + +ISPY+ QV QER + + S + +++ +VDG Q
Sbjct: 546 SEILTNLLKVSSETKTKMSVGVISPYKAQVSAIQERIGDKYTSVSDNLFTLNVRSVDGFQ 605
Query: 685 GREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTL 733
G E+D+ I S VR++ +IGFL++ +R NV +TRA+ + V+G TL
Sbjct: 606 GGEEDIIIISTVRSNCNGNIGFLSNRQRANVALTRARHCLWVIGNERTL 654
>gi|242074206|ref|XP_002447039.1| hypothetical protein SORBIDRAFT_06g027382 [Sorghum bicolor]
gi|241938222|gb|EES11367.1| hypothetical protein SORBIDRAFT_06g027382 [Sorghum bicolor]
Length = 1625
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 96/287 (33%), Positives = 152/287 (52%), Gaps = 5/287 (1%)
Query: 450 DRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPL-ATGC 508
DR+ I++ + A ++ T S S L + DV+I+DEAAQ E ++PL
Sbjct: 481 DRNWIQNYCMRNATLIFCTAS-SSYRLHNATIAPLDVLIVDEAAQVKECELVIPLRLRWL 539
Query: 509 KQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSR 568
K V LVGD QL V S V + G+G SLF+RL + +L QYRM+P + FP+
Sbjct: 540 KHVVLVGDDCQLRPLVRSQVCKEAGFGISLFERLVILNFEKHLLNIQYRMNPCISLFPNA 599
Query: 569 EFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLL 628
+FY++ + DG +V + + FG ++F +I +G+E + SW N+ EV VL
Sbjct: 600 KFYEKKILDGPNVFSSSYNKDYMGLPFGSYAFINITDGREEKEGAGNSWRNLVEVAVVLH 659
Query: 629 LFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREK 688
L + + + + ++SPY QV ++R + + V + ++DG QG E
Sbjct: 660 LIQTIFKSWRKRGQGISIGVVSPYSSQVAAIKDRLGKKYDTSDGFHVRVKSIDGFQGEED 719
Query: 689 DVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLRE 735
DV I S VR++ + ++GFLAD +R NV +TRA+ + C T+ E
Sbjct: 720 DVIILSTVRSNGRGNVGFLADNQRTNVALTRARCGSI---CCFTVVE 763
>gi|167378864|ref|XP_001734957.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165903256|gb|EDR28864.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 1040
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/302 (35%), Positives = 160/302 (52%), Gaps = 20/302 (6%)
Query: 458 ILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDP 517
ILN VCSTL+ + L L F I+DEAAQ++EP TL + ++ L+GD
Sbjct: 659 ILNGIECVCSTLTICTRSTL--LKQKFFASIVDEAAQSLEPETLAGII-NVRKAVLIGDI 715
Query: 518 VQLPATVISPVAEHLGYGTSLFKRLQRAGYPVK--MLKTQYRMHPEVRSFPSREFYDEAL 575
QL T +S A G+ S+F+R A +K MLKTQYRMHP + F ++ FY L
Sbjct: 716 QQLQPTCLSTEAREAGFQKSMFERFM-ANTQIKRTMLKTQYRMHPAIAEFSNKMFYSFKL 774
Query: 576 EDGSDVED-YTTRDWHEYRCF-GPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKL 633
E+G D ED + R + + + P F + +G+E + S+ N EV L++ +
Sbjct: 775 ENGVDGEDRFDDRIINFFPDYTNPIMFINC-DGREQYGSSGTSYNNEGEV---LIIKQIV 830
Query: 634 ISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIF 693
+ +++ IISPY+ Q QE + + + + +DG QG EK+ IF
Sbjct: 831 DGLLKNKVKENEIGIISPYQAQ----QELISQCVSTK----IKVANIDGFQGNEKEYIIF 882
Query: 694 SCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLF 753
SCVR++ IGF+ DY+R+NV +TRAK ++V+G TL K W+ LV +D LF
Sbjct: 883 SCVRSNQTLGIGFVNDYKRLNVALTRAKCGLIVIGNIQTLIGSKVWSMLVHHFYLRDALF 942
Query: 754 RV 755
+
Sbjct: 943 EL 944
>gi|156094736|ref|XP_001613404.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148802278|gb|EDL43677.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 2314
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 116/382 (30%), Positives = 193/382 (50%), Gaps = 41/382 (10%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQKR 434
++L A SN A + +V G++ NI++ VR+G + + AI K
Sbjct: 1853 KILAVADSNVAANNLV-----EGLKKRNIQA-----VRVGAGSDSDFHEEAIMDFHRYKD 1902
Query: 435 DDSAADKQKHGATRKDRDSIRSAILNEAV----IVCSTLSFSGSALLSKLNHGFDVVIID 490
K + +K+ +++ + EAV +V +T SG + N F+ VIID
Sbjct: 1903 ----LLKLRKNNLQKEAKVMKALLFLEAVKKYNVVIATCVGSGHEIFD--NEKFERVIID 1956
Query: 491 EAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGY-PV 549
E AQ++EP+ L+PL C + L+GD QLP T+IS A LG SL +R A PV
Sbjct: 1957 ECAQSIEPSNLIPLGHNCNNLVLIGDHKQLPPTIISSDATKLGLDRSLLERFVMAKIAPV 2016
Query: 550 KMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRD--------WHEYRCFGPFSFF 601
+L TQ RMH + +FP+ FYD L+ E+ T + W +C +F
Sbjct: 2017 HLLTTQRRMHLSICTFPNIHFYDNKLK----TENVTEENRPIIKGFLWPNPKC--RLAFI 2070
Query: 602 DIHEGKES---QPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQ 658
D+ GK + A S N+ E++ ++ + +++ S ++ I++ Y Q +
Sbjct: 2071 DVSLGKPGSKFENAYGTSKFNLYEIEPLISVLKSIVN--EGCVSVDEIGILTAYDAQKVK 2128
Query: 659 FQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGIT 718
++ ++ F E+ ++I ++DG QG+EKD+ +FS VR++ +GFL D RR+NV +T
Sbjct: 2129 LKKAVQDAFPYEAACRIEIDSIDGFQGKEKDLILFSAVRSNANNELGFLKDARRLNVMLT 2188
Query: 719 RAKSSILVVGCASTLRED-KHW 739
RAK +++ G TL D ++W
Sbjct: 2189 RAKRGVILFGDQFTLANDPENW 2210
>gi|449451781|ref|XP_004143639.1| PREDICTED: DNA-binding protein SMUBP-2-like [Cucumis sativus]
gi|449527761|ref|XP_004170878.1| PREDICTED: DNA-binding protein SMUBP-2-like [Cucumis sativus]
Length = 957
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 137/453 (30%), Positives = 209/453 (46%), Gaps = 69/453 (15%)
Query: 339 NPRDNIMPIDGDDGFFPTTGNELKPEVVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGI 398
N + I+ I G G T L E++ + + RVLV AP+N+A+D +V +L N GI
Sbjct: 496 NKKRPILIIQGPPG---TGKTGLLKELIALAVQQGERVLVTAPTNAAVDNMVEKLSNIGI 552
Query: 399 RDENIRSYTPKIVRIGLKAH--HSVNSVAIDHLVEQKRDDSAAD-KQKHGATRKDR---- 451
IVR+G A SV S ++ +V + D ++K RKD
Sbjct: 553 ----------NIVRVGNPARISSSVASKSLAEIVNSELSSFRTDIERKKADLRKDLRQCL 602
Query: 452 --DSIRSAI----------------------LNEAVIVCSTLSFSGSALLSKLNHGFDVV 487
DS+ + I L+ A +V +T + + L+ KL FD+V
Sbjct: 603 KDDSLAAGIRQLLKQLGKSLKKKEKETVKEVLSNAQVVLATNTGAADPLIRKLEK-FDLV 661
Query: 488 IIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQ--RA 545
+IDEA QA+EPA +P+ G ++ L GD QL ++S A G G SL +R
Sbjct: 662 VIDEAGQAIEPACWIPILQG-RRCILAGDQCQLAPVILSRKALEGGLGVSLLERAATLHE 720
Query: 546 GYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVED-------YTTRDWHEYRC---- 594
G ML QYRM+ + S+ S+E YD LE V + W +C
Sbjct: 721 GALTTMLTIQYRMNDAIASWASKEMYDGILESSPTVSSHLLVNSPFVKPTWI-TQCPLLL 779
Query: 595 ---FGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISP 651
P+ + + PAG+GS N E D V+ + S+ S +A+ SP
Sbjct: 780 LDTRMPYGSLSVGCEEHLDPAGTGSLYNEGEADIVV---QHVCSLIYSGVSPRAIAVQSP 836
Query: 652 YRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYR 711
Y QV+ + R E + +++ T+D QGRE D I S VR+++ ++GFL D R
Sbjct: 837 YVAQVQLLRNRLDE---IPESAGIEVATIDSFQGREADAVIISMVRSNNLGAVGFLGDSR 893
Query: 712 RMNVGITRAKSSILVVGCASTLREDKHWNNLVK 744
RMNV ITRA+ + +V +ST+ ++ L++
Sbjct: 894 RMNVAITRARKHVALVCDSSTICQNTFLARLLR 926
>gi|327274126|ref|XP_003221829.1| PREDICTED: hypothetical protein LOC100561644 [Anolis carolinensis]
Length = 2087
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 125/414 (30%), Positives = 209/414 (50%), Gaps = 44/414 (10%)
Query: 364 EVVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTG----IRDENIRSYTPKIVRIGLKAHH 419
E NS + +VL+ + +N A+D I+L LL+ G IR ++R ++ L H
Sbjct: 1660 EATNSKKSVPWKVLISSSTNVAVDRILLCLLDLGFDEFIRVGSVRKIAKPVLPYSL---H 1716
Query: 420 SVNSVAIDHLVE----QKRDDSAADKQKHGATRKD----RDSIRSAILNEAVIVCSTLSF 471
+ + +HL E K D + A+K G RK + A+L + +V T +
Sbjct: 1717 AGSGPENEHLKELFALMKEDLTPAEK---GYVRKTIELHKLGTNKALLQQVKVVGVTCAA 1773
Query: 472 SGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLAT-GCKQVFLVGDPVQLPATVISPVAE 530
+ L F +VI+DE +Q EPA+L+P+A C+++ LVGDP QLP T+ +
Sbjct: 1774 CPFPCMKNLT--FPIVILDECSQMTEPASLLPVARFECEKLVLVGDPKQLPPTIQGSESA 1831
Query: 531 H-LGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTR-D 588
H G +LF R+ GY +L+TQYR HP + + + FY+ L +G +D + D
Sbjct: 1832 HGNGLEQTLFDRMCLMGYEPILLRTQYRCHPAISAIANDLFYEGNLLNGISEKDRSPLID 1891
Query: 589 WHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAI 648
W CF + F+ Q S+ N+ E F++ L +I+ + S + +
Sbjct: 1892 WLPTLCFYNVNGFE-------QMERDNSFHNMAEAFFIVKLIQSMIASGAE---GSMIGV 1941
Query: 649 ISPYRHQVKQFQERFKETFGVESQ----KVVDITTVDGCQGREKDVAIFSCVRASDKKSI 704
I+ Y+ Q+ + V+S K V ++TVD QG EK++ I SCVR K +
Sbjct: 1942 ITLYKSQMSKICNLLG---AVQSDASLIKAVQVSTVDAFQGAEKEIIILSCVRT---KQV 1995
Query: 705 GFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVK-SAEKQDCLFRVSK 757
GF+ +R+NV +TR K +L+VG + LR++K W ++++ E+++ L V++
Sbjct: 1996 GFIDSEKRVNVALTRGKRHLLIVGNLNCLRKNKVWGSVIQHCTERKNGLQHVNQ 2049
>gi|146419989|ref|XP_001485953.1| hypothetical protein PGUG_01624 [Meyerozyma guilliermondii ATCC
6260]
Length = 650
Score = 160 bits (405), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 127/425 (29%), Positives = 199/425 (46%), Gaps = 60/425 (14%)
Query: 376 VLVCAPSNSALDEIVLRLLNTG-------IRDENIRSYTPKIVRIGLKAHHSVNSVAIDH 428
+LV A SN A+D I +L+ T + +E + Y+ + HH V A+
Sbjct: 232 ILVVAASNIAIDNIAEKLIKTHGREILRIVSNEKEKEYSRDHPLASICLHHKVYD-ALPQ 290
Query: 429 LVEQKRDD-----SAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHG 483
++Q DD S + + + + +A ++ +T +G L KL
Sbjct: 291 QMKQTVDDLRRPFSNVSQNLYKKLLTQQIKLSDMFTAQAKVIFTTTVVAGGNQL-KLVKK 349
Query: 484 FDVVIIDEAAQAVEPATLVPLAT-GCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKR- 541
VVI+DEA Q+ EP TL+PL+ G + VGD QL + + P SLF+R
Sbjct: 350 LPVVIMDEATQSSEPTTLIPLSMPGVDKFVFVGDQRQLSSFSMVP-----NLSLSLFERV 404
Query: 542 -LQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSF 600
L + ML TQYRMHP + FP +FYDE L+DG +D + E P F
Sbjct: 405 LLNNSYRNPHMLDTQYRMHPAISEFPRVKFYDELLKDGITADDRAMDNIPE----NPVYF 460
Query: 601 FDIHEGKESQPAGSG-------SWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYR 653
+D G ++ N++E+++V + KLI Y + S S + +I+PYR
Sbjct: 461 WDTKGKAREDRVRYGFREDRGYTYSNLNEIEYVTKVLMKLI--YDKQVSKSDIGVITPYR 518
Query: 654 HQVKQFQERF---------KETFGVE---------SQKV-------VDITTVDGCQGREK 688
Q + KE VE S+ V + I ++D QGREK
Sbjct: 519 GQRDLISNQLVKNDLINPEKEEVQVEVDRDDIYNESKPVTVHLVSGIMIASIDAFQGREK 578
Query: 689 DVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEK 748
+ + SCVR+++++ IGFL D RR+NV +TRAK ++++G S L+ D+ W ++ EK
Sbjct: 579 NFLVMSCVRSNEERKIGFLNDKRRLNVALTRAKYGLILIGDVSCLKGDELWREYLEFLEK 638
Query: 749 QDCLF 753
+ +F
Sbjct: 639 KGSVF 643
>gi|297738290|emb|CBI27491.3| unnamed protein product [Vitis vinifera]
Length = 6100
Score = 160 bits (405), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 101/296 (34%), Positives = 158/296 (53%), Gaps = 8/296 (2%)
Query: 462 AVIVCSTLSFSGSALLSKLNHG-FDVVIIDEAAQAVEPATLVPLAT-GCKQVFLVGDPVQ 519
++I C+ S S L ++N D+++IDEAAQ E +++PL + L+GD Q
Sbjct: 3953 SLIFCTA---SSSYQLYRVNMKPLDLLVIDEAAQLKECESVIPLQLPDIRHAILIGDECQ 4009
Query: 520 LPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGS 579
LPA V S V++ G+G SLF+RL G+ +L QYRMHP + FP+ +FY + D
Sbjct: 4010 LPAMVSSKVSKEAGFGRSLFERLSSLGHFKHLLNVQYRMHPSISFFPNSKFYFNQILDAP 4069
Query: 580 DVEDYT-TRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYP 638
+V+ + T+ + FG +SF ++ GKE S N+ EV V+ + L +
Sbjct: 4070 NVKSKSYTKHYLSGPMFGSYSFINVR-GKEEHDDVGKSRKNMIEVAIVIKIVGNLYKEWS 4128
Query: 639 QLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRA 698
+ +ISPY QV Q+ E + V + TVDG Q E+D+ I S VRA
Sbjct: 4129 GSNQKLSIGVISPYAAQVVAVQDNLGEKYENLDNFAVKVKTVDGFQAGEEDIIIMSTVRA 4188
Query: 699 SDKKSIGFLADYRRMNVGITRAKSSILVVGCASTL-REDKHWNNLVKSAEKQDCLF 753
+ SIGFL++ +R NV +TRA+ + ++G TL + + W +LV A+++ F
Sbjct: 4189 NSHGSIGFLSNPQRTNVALTRARHCLWILGNERTLAKSESVWEDLVCDAKRRKRFF 4244
Score = 155 bits (393), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 149/550 (27%), Positives = 244/550 (44%), Gaps = 67/550 (12%)
Query: 258 NASQLEAIHEGLLR------KAFVLIQGPPGTGKTQTILGLLSAIL-------HATPARV 304
N SQ+ A+ L + + LI GPPGTGKT+TI LL A+L P V
Sbjct: 1600 NKSQMAAVLASLRKIHCNHKSSVELICGPPGTGKTRTISALLCALLGTNIRTLTCAPTAV 1659
Query: 305 HSKG-GLREIKRGPELP-MHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELK 362
K R +K EL E N W + + I+ ++G+ F +T L+
Sbjct: 1660 AVKEVASRVMKHLKELAKCFEPLNGWRHSFNSM--------IVFLEGEQ--FKSTSLHLR 1709
Query: 363 PEVVNSSRRYRVRVLVCAPSNSALDEIV--LRLLNTGIRDENIRSYTPKIVRIGLK-AHH 419
EVV + + + + + A+ ++ LR + + +N+ S + + G K H
Sbjct: 1710 -EVVITLSTHIPKSFIMEHNFQAMLSLLGFLRSFESLLHQDNMVSEELENLFAGKKNVKH 1768
Query: 420 SVNSVAIDHLVEQKRDD---------SAADKQKHGATRKDRDSIRSAILNEAVIVCSTLS 470
S SVA + + R + ++ D+ + +D + A + ST S
Sbjct: 1769 SSKSVADSSTLMEIRSECLHILKNLRNSLDELQF-PKNNSKDLLIDFCFQTASSIFSTAS 1827
Query: 471 FSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLAT-GCKQVFLVGDPVQLPATVISPVA 529
S L + ++++IDEAAQ E + +PL G K L+GD QLP+ V S +
Sbjct: 1828 DSHKLHLVDMK-PLNILVIDEAAQLRECESTIPLQLPGIKLAILIGDKFQLPSRVTSNIC 1886
Query: 530 EHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYT-TRD 588
+ G+G SL++RL + L QYRMHP + FP FY + D +V+ +
Sbjct: 1887 DRAGFGRSLYERLSSLDHAKHFLNLQYRMHPSISLFPCSNFYANQILDAPNVKHKAYEKK 1946
Query: 589 WHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLA- 647
+ F P+ F +I G+E S N+ EV ++ + L + S QL
Sbjct: 1947 YLPDPVFRPYLFINISCGREEVDEVGHSVKNMVEVAVLMKIVQNLYQESLAISSKRQLCF 2006
Query: 648 -----------------------IISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQ 684
++S Y QV + QERF++ + + V + T+DG Q
Sbjct: 2007 FLFVSIPLLALEIQSERTLLRIGVLSSYTAQVLEIQERFRQKYENNDRFSVKVQTIDGFQ 2066
Query: 685 GREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTL-REDKHWNNLV 743
G E+D+ + S VRA++ S+G +AD + NV +TRA+ + ++G TL + W ++V
Sbjct: 2067 GGEEDIILISTVRANNFGSVGVMADVKITNVALTRARHGLWILGSERTLVMSETVWKDIV 2126
Query: 744 KSAEKQDCLF 753
A+ + CL
Sbjct: 2127 HDAKDRHCLL 2136
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 100/199 (50%), Gaps = 3/199 (1%)
Query: 558 MHPEVRSFPSREFYDEALEDGSDVEDYT-TRDWHEYRCFGPFSFFDIHEGKESQPAGSGS 616
MHP + FP FY + D +V+ + + F + F +I G+E S
Sbjct: 1 MHPSISLFPCSNFYANQILDAPNVKHKAYEKKYLPDPVFRLYLFINISCGREEVDEVGHS 60
Query: 617 WINIDEVDFVLLLFHKLISMYPQ-LKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVV 675
N+ EV ++ + L + +K ++ ++SPY QV + QER K+ + V
Sbjct: 61 VKNMVEVAVLMKIVQNLYQAWRSGIKEELRIGVLSPYTAQVLEIQERLKQKYENNDMFSV 120
Query: 676 DITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTL-R 734
+ T+DG QG E+D+ + S VRA++ S+G +AD + NV +TRA+ + ++G TL
Sbjct: 121 KVQTIDGFQGGEEDIILISTVRANNFGSVGVMADVKITNVALTRARHCLWILGSERTLVM 180
Query: 735 EDKHWNNLVKSAEKQDCLF 753
+ W ++V A+ + CL
Sbjct: 181 SETVWKDIVHDAKDRHCLL 199
>gi|186527077|ref|NP_198531.2| DEXDc and putative helicase domain-containing protein [Arabidopsis
thaliana]
gi|332006764|gb|AED94147.1| DEXDc and putative helicase domain-containing protein [Arabidopsis
thaliana]
Length = 839
Score = 160 bits (405), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 99/311 (31%), Positives = 167/311 (53%), Gaps = 11/311 (3%)
Query: 450 DRDSIRSAILNEA-VIVCSTLSFSGSALLSKLNHG-FDVVIIDEAAQAVEPATLVPLAT- 506
+ + IR L A +I+C+ SG+A ++ G +++++DEAAQ E ++ L
Sbjct: 494 ENEDIRKFCLQNADIILCTA---SGAAEMNVERTGNVELLVVDEAAQLKECESVAALQLP 550
Query: 507 GCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFP 566
G + L+GD QLPA V + + E +G SLF+RL G+ +L QYRMHP + FP
Sbjct: 551 GLRHAILIGDEFQLPAMVHNEMCEKAKFGRSLFERLVLLGHNKHLLDVQYRMHPSISRFP 610
Query: 567 SREFYDEALEDGSDV-EDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDF 625
++EFY ++D +V E + + + FG FSF ++ GKE G S N+ EV
Sbjct: 611 NKEFYGGRIKDAENVKESIYQKRFLQGNMFGSFSFINVGRGKEEFGDGH-SPKNMVEVAV 669
Query: 626 VLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVES--QKVVDITTVDGC 683
V + L + + + + ++SPY+ Q++ QE+ + + S Q +++ +VDG
Sbjct: 670 VSEIISNLFKVSCERRMKVSVGVVSPYKGQMRAIQEKIGDKYSSLSGQQFALNVRSVDGF 729
Query: 684 QGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLR-EDKHWNNL 742
QG E+D+ I S VR++ +GFL + +R NV +TRA+ + V+G +TL W L
Sbjct: 730 QGGEEDIIIISTVRSNSNGKVGFLNNRQRANVALTRARHCLWVIGNETTLALSGSIWATL 789
Query: 743 VKSAEKQDCLF 753
+ + + C +
Sbjct: 790 ISESRTRGCFY 800
>gi|383855988|ref|XP_003703492.1| PREDICTED: uncharacterized protein LOC100875185 [Megachile rotundata]
Length = 1557
Score = 160 bits (405), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 111/342 (32%), Positives = 171/342 (50%), Gaps = 46/342 (13%)
Query: 448 RKDRDSIR------SAILNEAVIVCSTLSFSGSALLSKL----NHGFDVVIIDEAAQAVE 497
+ +R+ IR + IL A I+ TLS + + + V I+DEA Q+ E
Sbjct: 1224 KNEREYIRLQRAAENRILEHADIITCTLSSCYTNQMESIFGSNKKKISVCIVDEATQSCE 1283
Query: 498 PATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRA-----GYPVKML 552
TL+PL G + LVGDP QLPATV+SP A+ G S+F R+Q A P+ ML
Sbjct: 1284 AETLIPLMLGVNILVLVGDPNQLPATVLSPQAKKCGLDQSIFSRVQNAFDFQPNNPIIML 1343
Query: 553 KTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPA 612
TQYRM + +P++ FY L+ +V H++ F P+ +++ +
Sbjct: 1344 DTQYRMQHGISYWPNKFFYGGVLKSAVEVN-------HKFP-FYPYRILNLNTYQ----- 1390
Query: 613 GSGSWINIDEVDFVL-LLFHKL-ISMYPQLKSSSQLAIISPYRHQVKQFQERFKETF--- 667
++ N DE FV ++F L S +S I++PY +Q E+ E
Sbjct: 1391 NDDNFSNNDEAKFVANMIFSMLTFSNLDSWESCISYGILTPYNNQKSVIIEKINEKVSSL 1450
Query: 668 --GVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSIL 725
++ + D+ TVDG QG+E+DV I SCVR+ + IGFL+D +R+ V +TRAK S++
Sbjct: 1451 PENIKRKVKFDVNTVDGFQGQERDVIIMSCVRS---ERIGFLSDRQRLCVALTRAKHSLI 1507
Query: 726 VVGCASTLREDKHWNNLVKSAEKQDCLFRVS--------KPY 759
+ G + D WN+L+ A+ + F V+ KPY
Sbjct: 1508 ICGNFNVFMRDLMWNSLLLDAKSRKVYFNVNANSGPHEIKPY 1549
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 75/152 (49%), Gaps = 23/152 (15%)
Query: 182 NIHSLITSSVSA--VEKRLFSLKICSLSTIAREYLALRSVGSL------PFKDLILSASE 233
N HSL+T ++ ++ + ++ L T+ +LR V +L P DLIL+
Sbjct: 954 NPHSLLTYTMKTKPLDNNIPVNRVQRLRTVTYLRPSLRLVQALQHLPNSPLGDLILNP-- 1011
Query: 234 KSSGSQDQSWKIPGLLHE---YIKENHNASQLEAIH---EGLLRKA--FVLIQGPPGTGK 285
+ + +++P + + + N Q EA++ E +++K IQGPPGTGK
Sbjct: 1012 -----KVEMYQLPNVSEKEALITGDKLNKKQCEAVYKVTEAVVQKVAKLCFIQGPPGTGK 1066
Query: 286 TQTILGLLSAILHATPARVHSKGGLREIKRGP 317
++ I+ +++ IL+ V++K LR + P
Sbjct: 1067 SKVIVNIVTQILYGNNRYVNNKSSLRILVCAP 1098
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 41/65 (63%), Gaps = 5/65 (7%)
Query: 374 VRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTP-KIVRIGLK--AHHSVNSVAIDHLV 430
+R+LVCAPSN+A+DEIVLRLL +N P K+VRIG H +V ++++ L
Sbjct: 1091 LRILVCAPSNAAIDEIVLRLLEIRSNIKNKGKMKPFKMVRIGRAEMMHATVKNISVTELA 1150
Query: 431 EQKRD 435
KRD
Sbjct: 1151 --KRD 1153
>gi|297805152|ref|XP_002870460.1| hypothetical protein ARALYDRAFT_493645 [Arabidopsis lyrata subsp.
lyrata]
gi|297316296|gb|EFH46719.1| hypothetical protein ARALYDRAFT_493645 [Arabidopsis lyrata subsp.
lyrata]
Length = 979
Score = 160 bits (405), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 144/458 (31%), Positives = 218/458 (47%), Gaps = 73/458 (15%)
Query: 336 VGANPRDNIMPIDGDDGFFPTTGNELKPEVVNSSRRYRVRVLVCAPSNSALDEIVLRLLN 395
+G N + +M + G G T + EV+ + + RVLV AP+N+A+D +V +LL+
Sbjct: 515 LGVNKKRPVMIVQGPPG---TGKTGMLKEVITLAVQQGERVLVTAPTNAAVDNMVEKLLH 571
Query: 396 TGIRDENIRSYTPKIVRIGLKAHHS--VNSVAIDHLVEQKRDDSAAD-KQKHGATRKD-- 450
G+ IVR+G A S V S ++ +V K A+ ++K RKD
Sbjct: 572 LGL----------NIVRVGNPARISSAVASKSLGEIVNSKLASFRAELERKKSDLRKDLR 621
Query: 451 ---RDSIRSA-----------------------ILNEAVIVCSTLSFSGSALLSKLNHGF 484
RD + +A IL+ A +V +T + L+ +L F
Sbjct: 622 QCLRDDVLAAGIRQLLKQLGKTLKKKEKETVKEILSNAHVVFATNIGAADPLIRRL-ETF 680
Query: 485 DVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQR 544
D+V+IDEA Q++EP+ +P+ G K+ L GDP QL V+S A G G SL +R
Sbjct: 681 DLVVIDEAGQSIEPSCWIPILQG-KRCILSGDPCQLAPVVLSRKALEGGLGVSLLERAAS 739
Query: 545 A--GYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRD-------WHEYRCF 595
G L TQYRM+ + + S+E Y L+ V + D W +C
Sbjct: 740 LHDGVLATKLTTQYRMNDVIAGWASKEMYGGWLKSAPSVASHLLIDSPFVKPTWIT-QC- 797
Query: 596 GPFSFFD-------IHEGKESQ--PAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQL 646
P D + G E + PAG+GS N E D V+ + +IS+ S +
Sbjct: 798 -PLVLLDTRMPYGSLSMGCEERLDPAGTGSLYNEGEADIVV---NHVISLIYAGVSPMAI 853
Query: 647 AIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGF 706
A+ SPY QV+ +ER + F V V++ T+D QGRE D I S VR+++ ++GF
Sbjct: 854 AVQSPYVAQVQLLRERLDD-FPVADG--VEVATIDSFQGREADAVIISMVRSNNLGAVGF 910
Query: 707 LADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVK 744
L D RRMNV ITRA+ + VV +ST+ + L++
Sbjct: 911 LGDSRRMNVAITRARKHVAVVCDSSTICHNTFLARLLR 948
>gi|221051872|ref|XP_002257512.1| erythrocyte membrane-associated antigen,putative [Plasmodium knowlesi
strain H]
gi|193807342|emb|CAQ37847.1| erythrocyte membrane-associated antigen,putative [Plasmodium knowlesi
strain H]
Length = 2351
Score = 160 bits (405), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 116/382 (30%), Positives = 193/382 (50%), Gaps = 41/382 (10%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQKR 434
++L A SN A + +V G++ NI++ VR+G + + AI K
Sbjct: 1890 KILAVADSNVAANNLV-----EGLKKRNIQA-----VRVGAGSDSDFHEEAIMDFHRYKD 1939
Query: 435 DDSAADKQKHGATRKDRDSIRSAILNEAV----IVCSTLSFSGSALLSKLNHGFDVVIID 490
K + +K+ +++ + EAV +V +T SG + N F+ VIID
Sbjct: 1940 ----LLKLRKNNLQKEAKVMKALLFLEAVRKYNVVIATCVGSGHEIFD--NEKFERVIID 1993
Query: 491 EAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGY-PV 549
E AQ++EP+ L+PL C + L+GD QLP T+IS A LG SL +R A PV
Sbjct: 1994 ECAQSIEPSNLIPLGHNCTNLVLIGDHKQLPPTIISSDATKLGLDRSLLERFVMAKIAPV 2053
Query: 550 KMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRD--------WHEYRCFGPFSFF 601
+L TQ RMH + +FP+ FYD L+ E+ T + W +C +F
Sbjct: 2054 HLLTTQRRMHLSICTFPNIHFYDNKLK----TENVTEENRPIIKGFLWPNPKC--RLAFI 2107
Query: 602 DIHEGKES---QPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQ 658
D+ GK + A S N+ E++ ++ + +++ S ++ I++ Y Q +
Sbjct: 2108 DVSLGKPGSKFENAYGTSKFNLYEIEPLIAVLKSIVN--EGCVSVDEIGILTAYDAQKVK 2165
Query: 659 FQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGIT 718
++ ++ F E+ ++I ++DG QG+EKD+ +FS VR++ +GFL D RR+NV +T
Sbjct: 2166 LKKAVQDAFPYEAACRIEIDSIDGFQGKEKDLILFSAVRSNANNELGFLKDARRLNVMLT 2225
Query: 719 RAKSSILVVGCASTLRED-KHW 739
RAK +++ G TL D ++W
Sbjct: 2226 RAKRGVILFGDQFTLANDPENW 2247
>gi|404449013|ref|ZP_11014005.1| type III restriction enzyme, res subunit [Indibacter alkaliphilus
LW1]
gi|403765737|gb|EJZ26615.1| type III restriction enzyme, res subunit [Indibacter alkaliphilus
LW1]
Length = 642
Score = 160 bits (405), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 124/416 (29%), Positives = 202/416 (48%), Gaps = 49/416 (11%)
Query: 375 RVLVCAPSNSALD------------------------EIVLRLLNTGIRD-------ENI 403
+VLVCAPSN+A+D +I+L+ L+ I + + +
Sbjct: 228 QVLVCAPSNAAVDLLVEKLSERNISALRMGHPARVEEQILLQTLDAKIANHASYKDLKRL 287
Query: 404 RSYTPKIVRIGLKAHHSVNSVAIDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAV 463
+ ++V++G K S + ++++R AD+ + A + D I I +
Sbjct: 288 KKSIDELVKMGKKYKRSFGH---EERMQRRRYFEEADRCRDEA-KSLEDYIVYDIFQSSQ 343
Query: 464 IVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPAT 523
++ TL + S+ L + F VV IDEA Q +E AT +P+ K+V + GD +QLP T
Sbjct: 344 VIACTLVGAASSYLKSFS--FPVVFIDEAGQGLEAATWIPIQKA-KKVVMAGDHLQLPPT 400
Query: 524 VISPVAEHLGYGTSLF-KRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVE 582
+ S A G G +LF K + R ML+ QYRMH + F +R FY L + +
Sbjct: 401 IKSFEASKSGLGITLFEKAILRQPSSAVMLREQYRMHELIMGFSNRHFYQGELMAAPNTQ 460
Query: 583 DYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLL---FHKLISMYPQ 639
+ + F S +E E + S S N++E F L F K I +
Sbjct: 461 AHYILEEEPVLEFVDTSGSGYNEQVEEE---SLSTYNLEEARFALNYLESFVKRIGLRQL 517
Query: 640 LKSSSQLAIISPYRHQVKQFQERFKETFGVES----QKVVDITTVDGCQGREKDVAIFSC 695
+ + +I+PYR QV++ E +T+ + + + I ++DG QGRE+DV + S
Sbjct: 518 KEREFSIGLIAPYRAQVRRLNELLFDTYEFPNLRSYSEFLTIDSIDGFQGRERDVMLISL 577
Query: 696 VRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDC 751
VR++ K IGFLAD RRMNV +TRAK ++V+G ++TL + + E+++C
Sbjct: 578 VRSNAKGEIGFLADTRRMNVALTRAKRKMIVIGDSATLSSHSFYTAFLDYVEEKNC 633
>gi|26338079|dbj|BAC32725.1| unnamed protein product [Mus musculus]
Length = 528
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 120/395 (30%), Positives = 201/395 (50%), Gaps = 43/395 (10%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTG----IRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLV 430
+VLV + +N A+D ++L LL+ G IR ++R ++ L A D+
Sbjct: 130 KVLVSSSTNVAVDRVLLGLLSLGFEKFIRVGSVRKIAKPVLPYSLHA-------GSDNES 182
Query: 431 EQKRDDSAADKQKHGATRKDRDSIRSAI-----------LNEAVIVCSTLSFSGSALLSK 479
EQ ++ +A K++ T +R +R +I L + +V T + L+
Sbjct: 183 EQLKELNALLKEE--LTPIERVYVRKSIEQHKLGTNRVLLKQVRVVGVTCAACAFPCLND 240
Query: 480 LNHGFDVVIIDEAAQAVEPATLVPLAT-GCKQVFLVGDPVQLPATVISPVAEHL-GYGTS 537
L F VV++DE +Q EPA+L+P+A C+++ LVGDP QLP T+ A H G +
Sbjct: 241 LK--FPVVVLDECSQMTEPASLLPIARFQCEKLILVGDPKQLPPTIQGSDAAHENGLEQT 298
Query: 538 LFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDG-SDVEDYTTRDWHEYRCFG 596
LF RL G+ +L+TQYR HP + + + FY+ +L +G S+ E +W CF
Sbjct: 299 LFDRLCLMGHKPVLLRTQYRCHPAISAIANDLFYEGSLVNGISERERSPVLEWLPTLCF- 357
Query: 597 PFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQV 656
+++ G E Q S++N+ E F L L L++ + S + +I+ Y+ Q+
Sbjct: 358 ----YNV-TGAE-QVERENSFVNVAEATFTLKLIQSLMASGVE---SCMIGVITLYKSQM 408
Query: 657 KQFQERFKET-FGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNV 715
+ G K V ++TVD QG EK++ I SCVR + +GF+ +RMNV
Sbjct: 409 YKICNLLSAVDVGHPDVKAVQVSTVDAFQGAEKEITILSCVRT---RQVGFIDSEKRMNV 465
Query: 716 GITRAKSSILVVGCASTLREDKHWNNLVKSAEKQD 750
+TR + +L+VG S LR+++ W +++ E ++
Sbjct: 466 ALTRGRRHLLIVGSLSCLRKNRLWGRVIQHCEGRE 500
>gi|383458482|ref|YP_005372471.1| putative DNA helicase [Corallococcus coralloides DSM 2259]
gi|380730970|gb|AFE06972.1| putative DNA helicase [Corallococcus coralloides DSM 2259]
Length = 653
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 149/486 (30%), Positives = 215/486 (44%), Gaps = 68/486 (13%)
Query: 311 REIKRGPELPMHEKYNHWGRASPWLVGANP--RDNIMPIDGDDGFF-----PTTG-NELK 362
RE+ G E P + + P NP +D M + FF P TG + +
Sbjct: 170 REVLLGNEPPRFDNTKDFTPTRPL----NPEQQDAAMRALAAEDFFLVHGPPGTGKSTVL 225
Query: 363 PEVVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAH---- 418
EV + R+L A SN+A+D ++ L G+R IR P V L+ H
Sbjct: 226 AEVAAQAVARGERLLCTAASNAAVDHLLELCLEQGLR--AIRVGHPARVAARLQEHTLDI 283
Query: 419 ----HSVNSVAIDHLVE----------------------QKRDDSAADKQKHGATRKDRD 452
H V+ D E R +A K RK
Sbjct: 284 VVEEHPDRVVSRDLFDEAFDLFGYARRQRSQGRSRERFSNARSSTAEAKDLMDEARKLEK 343
Query: 453 SIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVF 512
A+L A +VC TL+ GS +L+ FD ++DEA QA EP L+ K V
Sbjct: 344 KAVKAVLARADVVCVTLASLGSGVLA--GEEFDRALLDEATQATEPLALLGFLRAPK-VV 400
Query: 513 LVGDPVQLPATVISPVAEHLGYGTSLFKR-LQRAGYPVK-MLKTQYRMHPEVRSFPSREF 570
L GDP QLP TV+S A G GTSLF+R LQ G VK ML+ QYRM+ + +FPS+E
Sbjct: 401 LAGDPQQLPPTVLSQEAAKAGLGTSLFERLLQDHGDEVKRMLREQYRMNAAIMAFPSKEM 460
Query: 571 YDEALEDGSDVEDYTTRDWHEYRCFG-----PFSFFDIHEGK----ESQPAGSGSWINID 621
Y L V D T + P + D GK E +P + S +N
Sbjct: 461 YGGELRAHPSVADRTLSSVLDSGSGAEVDAPPVLYLDT-AGKGFDEEVEPT-THSLLNPG 518
Query: 622 EVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVD 681
E +V+ +L+S+ + ++A+I+PY Q + +E + V++ TVD
Sbjct: 519 EATYVIARVRQLLSLG---LAPREVAVIAPYSAQARHLREALEAV-----HPEVEVDTVD 570
Query: 682 GCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNN 741
QGREKD + S R++ + +GFL D RRMNV +TRA+ + VVG ++TL +
Sbjct: 571 AFQGREKDAILVSMTRSNSEGQLGFLNDLRRMNVALTRARRHLFVVGDSATLSSHPFYAR 630
Query: 742 LVKSAE 747
++ +
Sbjct: 631 FIEGTQ 636
>gi|115372685|ref|ZP_01459992.1| superfamily I DNA/RNA helicase [Stigmatella aurantiaca DW4/3-1]
gi|310823878|ref|YP_003956236.1| DNA helicase [Stigmatella aurantiaca DW4/3-1]
gi|115370406|gb|EAU69334.1| superfamily I DNA/RNA helicase [Stigmatella aurantiaca DW4/3-1]
gi|309396950|gb|ADO74409.1| DNA helicase [Stigmatella aurantiaca DW4/3-1]
Length = 640
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 154/484 (31%), Positives = 222/484 (45%), Gaps = 66/484 (13%)
Query: 311 REIKRGPELPMHEKYNHWGRASPWLVGANPR--DNIMPIDGDDGFF-----PTTG-NELK 362
RE+ G E P EK + + P NP D + + FF P TG + +
Sbjct: 158 REVLLGNEPPRFEKPSDAPPSRPL----NPEQADAVSRALAAEDFFLVHGPPGTGKSTVL 213
Query: 363 PEVVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVN 422
EV + R+L A SN+A+D ++ L G+R IR P V + H+++
Sbjct: 214 AEVAVQAVARGERLLCTAASNAAVDHLLELCLEQGLR--AIRVGHPARVAPRFQ-EHTLD 270
Query: 423 SVAIDH----LVEQKRDDS------AADKQKHGATRKDRDSIRS---------------- 456
V +H L + D++ A ++ G +R+ + RS
Sbjct: 271 IVVEEHPDRVLSRELFDEAFSLFGYARRQRTQGRSRERFSNARSSTAEAKGLMDDARALE 330
Query: 457 -----AILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQV 511
A+L A ++C TL+ GS +L+ + FD +IDEA QA EP TL+ K V
Sbjct: 331 RKAVRAVLERAQVICVTLASLGSGVLA--HEEFDRALIDEATQATEPLTLLGFLRAPKLV 388
Query: 512 FLVGDPVQLPATVISPVAEHLGYGTSLFKRL-QRAGYPVK-MLKTQYRMHPEVRSFPSRE 569
L GDP QLP TV+S A G G SLF+RL Q G VK ML+ QYRM+ + FPSRE
Sbjct: 389 -LAGDPQQLPPTVLSQEAAKAGLGVSLFERLLQDHGEGVKRMLREQYRMNARIMDFPSRE 447
Query: 570 FYDEALEDGSDVEDYTTRDWHEYRC---FGPFSFFDIHEGK---ESQPAGSGSWINIDEV 623
Y AL V + T P F D GK E + + S N E
Sbjct: 448 MYGGALRAHPSVAERTLAPVLSPGAELDAPPVLFLDT-AGKGFEEQEEESTHSLFNPGEA 506
Query: 624 DFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGC 683
D +L L++ S +LA+I+PY Q +ER E + V++ TVD
Sbjct: 507 DLILARVKALLAAG---LSPRELAVIAPYSAQAFHLRERV-EILSPD----VEVDTVDAF 558
Query: 684 QGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLV 743
QGREKD + S R++ ++GFL D RRMNV +TRA+ + VVG ++TL + +
Sbjct: 559 QGREKDAILVSLTRSNADGNLGFLTDLRRMNVAMTRARRHLFVVGDSATLSGHPFYARFI 618
Query: 744 KSAE 747
+ +
Sbjct: 619 EGTQ 622
>gi|195014032|ref|XP_001983946.1| GH15286 [Drosophila grimshawi]
gi|193897428|gb|EDV96294.1| GH15286 [Drosophila grimshawi]
Length = 1706
Score = 160 bits (404), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 124/448 (27%), Positives = 199/448 (44%), Gaps = 88/448 (19%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGL--KAHHSVNSVAIDHLVEQ 432
++L+CA SN+A+D I L + +Y ++R GL K + +V ++++H ++Q
Sbjct: 1259 KILICAHSNAAVDNITYYLKRAH---HAMCNYRFDVLRFGLFEKMNPNVQDISLNHYLKQ 1315
Query: 433 KRDD-----------SAADKQ----------KHGATR----------------------- 448
KRD+ S ++Q K +T+
Sbjct: 1316 KRDEKRNRLTADNILSLTNQQNELKMEIAELKKSSTKMNYMQQQLTAKERQLRLITEQLN 1375
Query: 449 -----KDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVP 503
++ + + A IVC+TLS L+ FD+ IIDEA Q EP TL+P
Sbjct: 1376 PPLTPREEHRFSTERVERANIVCTTLS--SCVKLANFIDYFDICIIDEATQCTEPFTLLP 1433
Query: 504 LATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQR--------------AGYPV 549
L G + + LVGD QLPATV+S A G G S+F R+QR +
Sbjct: 1434 LRFGVRGLVLVGDTQQLPATVLSQKAIDFGLGNSMFARIQRNLQLQLERKRVNQVVHTKI 1493
Query: 550 KMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKES 609
L TQYRMHP++ +P+ FYD L + D Y F P+ ++ +++
Sbjct: 1494 FRLSTQYRMHPDICQWPNSYFYDNQLTNA-DCTAYLISP------FIPYCVINLSYTQDT 1546
Query: 610 QPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGV 669
S S N +E FV L ++ P + + +I+PY + + T +
Sbjct: 1547 NDVSSRSISNDEEAHFVAKLLVEMNKHMPAER--YKYGLITPYSNHCYTLSQVIPSTMKI 1604
Query: 670 ESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGC 729
Q TVD QG+E+D+ I S R + +GFL +Y+R+NV ITR K +++ G
Sbjct: 1605 TPQ------TVDAYQGQERDIIILSNART---RGVGFLTNYQRLNVAITRPKRCLVICGN 1655
Query: 730 ASTLREDKHWNNLVKSAEKQDCLFRVSK 757
L+ + W +L+ A ++ F V +
Sbjct: 1656 FDDLQSVQIWRHLLDDARSRNIYFDVKR 1683
>gi|170095291|ref|XP_001878866.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164646170|gb|EDR10416.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 721
Score = 160 bits (404), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 138/439 (31%), Positives = 197/439 (44%), Gaps = 93/439 (21%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQK- 433
R+LVC SN ++D I+ RLL + +S K+ RIG A + I+ +E K
Sbjct: 270 RLLVCGASNLSVDNILERLLAL---PADGKSEKVKVTRIGHPARVMTHEGIIESTLEVKA 326
Query: 434 -RDDSAA------------------------DKQKHGATRKD---------------RDS 453
R + AA K GA RK
Sbjct: 327 TRTEQAALAKDVKNELETALGVLSGKGKSVKGKGPRGAERKKMWEEVKALRKEYRQREGG 386
Query: 454 IRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFL 513
+ ++L E+ IV +T SG L H FDVVIIDEA QA+E +P+ K++ L
Sbjct: 387 VVKSVLGESQIVLATCHSSGGRQLR--YHDFDVVIIDEATQALEAVCWIPIFKA-KKLIL 443
Query: 514 VGDPVQLPATVIS-----------------------PVAEHLGYGTSLFKRLQRAGYPV- 549
GDP+QLP T++S + T+LF RL++ P
Sbjct: 444 AGDPMQLPPTILSIGNNKKAKAKAGKSASIATNKRIELMPPRTLETTLFDRLEKMYGPSI 503
Query: 550 -KMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFG----------PF 598
+MLK QYRMH ++ +FPS+ Y L+ S V +D P
Sbjct: 504 KRMLKVQYRMHAQICAFPSKTLYGSKLQSHSSVAARLLQDLPNTHADSEEDVKDMLQTPV 563
Query: 599 SFFDI----HEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRH 654
FFD + + GS N +EV V KL+ + Q K Q+AII+PY+
Sbjct: 564 VFFDTAGCEYFERLDGDGDEGSRCNENEVTIVKNWVEKLVEVGIQPK---QIAIITPYQA 620
Query: 655 QVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMN 714
QV + T+G + ++I TVDG QGREK+V I S VR++D + +GFL + RRMN
Sbjct: 621 QVTLLTSTLRPTYGPD----LEIGTVDGMQGREKEVIIISLVRSNDTREVGFLKEKRRMN 676
Query: 715 VGITRAKSSILVVGCASTL 733
V +TRAK + +VG +ST+
Sbjct: 677 VAMTRAKRHLCIVGDSSTV 695
>gi|74142749|dbj|BAE33905.1| unnamed protein product [Mus musculus]
Length = 606
Score = 160 bits (404), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 120/395 (30%), Positives = 201/395 (50%), Gaps = 43/395 (10%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTG----IRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLV 430
+VLV + +N A+D ++L LL+ G IR ++R ++ L A D+
Sbjct: 194 KVLVSSSTNVAVDRVLLGLLSLGFEKFIRVGSVRKIAKPVLPYSLHA-------GSDNES 246
Query: 431 EQKRDDSAADKQKHGATRKDRDSIRSAI-----------LNEAVIVCSTLSFSGSALLSK 479
EQ ++ +A K++ T +R +R +I L + +V T + L+
Sbjct: 247 EQLKELNALLKEE--LTPIERVYVRKSIEQHKLGTNRVLLKQVRVVGVTCAACAFPCLND 304
Query: 480 LNHGFDVVIIDEAAQAVEPATLVPLAT-GCKQVFLVGDPVQLPATVISPVAEHL-GYGTS 537
L F VV++DE +Q EPA+L+P+A C+++ LVGDP QLP T+ A H G +
Sbjct: 305 LK--FPVVVLDECSQMTEPASLLPIARFQCEKLILVGDPKQLPPTIQGSDAAHENGLEQT 362
Query: 538 LFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDG-SDVEDYTTRDWHEYRCFG 596
LF RL G+ +L+TQYR HP + + + FY+ +L +G S+ E +W CF
Sbjct: 363 LFDRLCLMGHKPVLLRTQYRCHPAISAIANDLFYEGSLVNGISERERSPVLEWLPTLCF- 421
Query: 597 PFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQV 656
+++ G E Q S++N+ E F L L L++ + S + +I+ Y+ Q+
Sbjct: 422 ----YNV-TGAE-QVERENSFVNVAEATFTLKLIQSLMASGVE---SCMIGVITLYKSQM 472
Query: 657 KQFQERFKET-FGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNV 715
+ G K V ++TVD QG EK++ I SCVR + +GF+ +RMNV
Sbjct: 473 YKICNLLSAVDVGHPDVKAVQVSTVDAFQGAEKEITILSCVRT---RQVGFIDSEKRMNV 529
Query: 716 GITRAKSSILVVGCASTLREDKHWNNLVKSAEKQD 750
+TR + +L+VG S LR+++ W +++ E ++
Sbjct: 530 ALTRGRRHLLIVGSLSCLRKNRLWGRVIQHCEGRE 564
>gi|359405877|ref|ZP_09198604.1| putative DNA helicase [Prevotella stercorea DSM 18206]
gi|357557227|gb|EHJ38779.1| putative DNA helicase [Prevotella stercorea DSM 18206]
Length = 622
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 127/404 (31%), Positives = 200/404 (49%), Gaps = 35/404 (8%)
Query: 355 PTTGNELK-PEVVNSSRRYRVRVLVCAPSNSALDEIVLRLLNTGI---RDENIRSYTPKI 410
P TG E + + R +VLVCA SN A+D I +L++ G+ R N K+
Sbjct: 210 PGTGKTTTLVEAIYETLRRESQVLVCAQSNMAVDWIAEKLVDRGVNVLRIGNPTRVNDKM 269
Query: 411 VRIG----LKAH------HSVNSVAIDHLVEQKRDDS---AADKQKHGATRKDRDSIRSA 457
+ +AH S+ + E++R D+ D+ K AT + IR++
Sbjct: 270 LSFTYERRFEAHPDYPQLWSIRKAIRELRGERRRSDAWHQKMDRLKSRATEIEL-RIRAS 328
Query: 458 ILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDP 517
+ EA ++ TL+ + + +L F + IDEAAQA+E A + + + +F GD
Sbjct: 329 LFGEARVIACTLTGAANRVLE--GEKFSTLFIDEAAQALEAACWIAIRRAGRVIF-AGDH 385
Query: 518 VQLPATVISPVAEHLGYGTSLFKRLQRAGYP--VKMLKTQYRMHPEVRSFPSREFYDEAL 575
QLP TV S +A G G +L +R+ +A P V +LK QYRM+ ++ F S FY +
Sbjct: 386 CQLPPTVKSIMALKGGLGITLMERIVKAK-PDVVTLLKVQYRMNEQIMRFSSDWFYGGEV 444
Query: 576 EDGSDVEDYTTRDWHEYRCFGPFSFFDIHE--GKESQPAGSGSWINIDEVDFVLLLFHKL 633
+ +E + D+ P + D E GKE + IN E + L +
Sbjct: 445 QTAPGIERRSILDYDR-----PMMWVDTSEAEGKEEFVGENFGRINRTEAELTLQTLQQY 499
Query: 634 ---ISMYPQLKSSSQLAIISPYRHQVKQFQERFKET-FGVESQKVVDITTVDGCQGREKD 689
I L + IISPYR QV+ + +++ F ++ + + TVDG QG+E+D
Sbjct: 500 FEKIGKQRILDEHIDVGIISPYRAQVQLLHKMIRQSEFFRPYRRAISVNTVDGFQGQERD 559
Query: 690 VAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTL 733
+ + S VR +D K IGFL D RRMNV ITRA+ ++++G A+T+
Sbjct: 560 IIVISLVRNNDGKEIGFLRDLRRMNVAITRARMKLIILGSAATM 603
Score = 39.3 bits (90), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 24/33 (72%)
Query: 258 NASQLEAIHEGLLRKAFVLIQGPPGTGKTQTIL 290
NASQ +A++E L K ++ GPPGTGKT T++
Sbjct: 187 NASQQQAVNEVLRAKDVAVVHGPPGTGKTTTLV 219
>gi|218191424|gb|EEC73851.1| hypothetical protein OsI_08612 [Oryza sativa Indica Group]
Length = 979
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 141/446 (31%), Positives = 212/446 (47%), Gaps = 71/446 (15%)
Query: 336 VGANPRDNIMPIDGDDGFFPTTGNELKPEVVNSSRRYRVRVLVCAPSNSALDEIVLRLLN 395
+G N + ++ I G G T L E++ + + VLV APSN+A+D +V RL N
Sbjct: 513 LGLNKKRPVLIIQGPPGTGKTV---LLTELIVRAVQQGENVLVTAPSNAAVDNMVERLSN 569
Query: 396 TGIRDENIRSYTPKIVRIGLKAH--HSVNSVAIDHLV-----------EQKR-------- 434
TG+ IVR+G A SV S ++ +V E+KR
Sbjct: 570 TGL----------NIVRVGNPARISPSVASKSLAEIVNRRLEQFRKELERKRSDLRKDLS 619
Query: 435 ----DDSAADKQKH-------GATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHG 483
DDS A + +K+++ IR +L+EA +V ST + + L+ +
Sbjct: 620 YCIEDDSLAAGIRQLLKQLGRDLEKKEKEMIRE-VLSEAQVVLSTNTGAADPLIRR-TCC 677
Query: 484 FDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQ 543
FD+VIIDEA QA+EP+ +P+ G K+ L GD QL ++S G G SL +R
Sbjct: 678 FDLVIIDEAGQAIEPSCWIPILQG-KRCILAGDHCQLAPVILSRKVLDGGLGKSLLERAS 736
Query: 544 --RAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRD-------WHEYRC 594
G L Q+RM+ + S+ S+E Y L+ V T D W RC
Sbjct: 737 SLHNGLLTTRLTVQHRMNDSIASWASKEMYHGLLKSSHSVASQTLADSPVVKATWIT-RC 795
Query: 595 -------FGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLA 647
P+ D G++ AG+GS+ N E D V ++++ S + +A
Sbjct: 796 PLLLLDTRMPYGALDTGCGEQIDLAGTGSFYNDGEADIV---TQHVLNLVHCGVSPTAIA 852
Query: 648 IISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFL 707
+ SPY QV+ +ER +E G+ V+++T+D QGRE D + S VR++ ++GFL
Sbjct: 853 VQSPYIAQVQLLRERLEEYPGLSG---VEVSTIDSFQGREADAVVISMVRSNPLGAVGFL 909
Query: 708 ADYRRMNVGITRAKSSILVVGCASTL 733
D RRMNV ITRA + VV ST+
Sbjct: 910 GDSRRMNVAITRACRHVTVVCDTSTI 935
>gi|357155053|ref|XP_003576992.1| PREDICTED: DNA-binding protein SMUBP-2-like [Brachypodium
distachyon]
Length = 980
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 143/475 (30%), Positives = 222/475 (46%), Gaps = 78/475 (16%)
Query: 323 EKYNHWGRAS---PWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNSSRRYRVRVLVC 379
EKYN+ AS +G N + I+ I G G T L ++ + + R RVLV
Sbjct: 498 EKYNYDFDASQSHAIALGLNKKRPIVVIQGPPG---TGKTGLLSNLIRCAVQQRERVLVT 554
Query: 380 APSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIG--LKAHHSVNSVAIDHLVEQK---- 433
APSN+A+D +V +L TG+ IVR+G + SV+S ++ +V++
Sbjct: 555 APSNAAVDNMVEKLSGTGL----------NIVRVGNPSRISPSVSSKSLGEIVKRSLEKF 604
Query: 434 -------------------RDDSAA-------DKQKHGATRKDRDSIRSAILNEAVIVCS 467
+DDS A K +K+ ++I+ IL+ A +V S
Sbjct: 605 TQEFQMKKSNLRKDLNHCIQDDSLAAGIRQRLKKLGKNFRKKENETIKE-ILSNAEVVLS 663
Query: 468 TLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISP 527
T + L+ + FD+VIIDEA QA+EP+ +P+ G K+ L GD QL ++S
Sbjct: 664 TNIGAADPLIKGIGF-FDLVIIDEAGQAIEPSCWIPILQG-KRCILAGDQHQLAPVILSR 721
Query: 528 VAEHLGYGTSLFKRLQRA--GYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYT 585
A G G SL +R G L QYRMH + S+ S E Y L+ V
Sbjct: 722 EAMEGGLGISLLQRASSLHDGLLTTQLTMQYRMHESIASWASNEMYSGLLKSSPSVASRL 781
Query: 586 TRDWHEY------RCF-------GPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHK 632
D+ RC P+ +I + AG+GS+ N E D V+
Sbjct: 782 LVDYPFIQETWITRCALLLLDTRMPYGSLNIDCEEHLDFAGTGSFYNNGEADIVV---QH 838
Query: 633 LISMYPQLKSSSQLAIISPYRHQVKQFQ---ERFKETFGVESQKVVDITTVDGCQGREKD 689
++++ S + +A+ SPY QV+ + E + E +GVE ++T+D QGRE D
Sbjct: 839 VLNLVLCGVSPTAIAVQSPYIAQVQLLRDTLEEYPEAYGVE------VSTIDSFQGREAD 892
Query: 690 VAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVK 744
+ S VR++ ++GFL D RRMNV ITRA+ +++V +ST+ + L++
Sbjct: 893 AVVISMVRSNSLGAVGFLGDSRRMNVAITRARRHVVLVCDSSTICNNAFLARLLR 947
Score = 40.8 bits (94), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 37/59 (62%), Gaps = 6/59 (10%)
Query: 240 DQSWKIPGLLHEYIKENHNASQLEAIHEGLLRK-AFVLIQGPPGTGKTQTILGLLSAIL 297
+ + + GLL +Y + +ASQ AI GL +K V+IQGPPGTGKT GLLS ++
Sbjct: 488 ESAMPVDGLLEKY-NYDFDASQSHAIALGLNKKRPIVVIQGPPGTGKT----GLLSNLI 541
>gi|385800522|ref|YP_005836926.1| DNA helicase [Halanaerobium praevalens DSM 2228]
gi|309389886|gb|ADO77766.1| DNA helicase [Halanaerobium praevalens DSM 2228]
Length = 749
Score = 159 bits (403), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 112/317 (35%), Positives = 163/317 (51%), Gaps = 35/317 (11%)
Query: 458 ILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDP 517
++ A ++C+T +G+ +L N FD+ IIDEA QA +PA L+P K+ L+GD
Sbjct: 449 LITAADVICTTNITAGAEILE--NQQFDLSIIDEATQATQPAALIPYLK-AKKTILIGDQ 505
Query: 518 VQLPATVISPVAEHLGYGTSLFKRLQRAGYP--VKMLKTQYRMHPEVRSFPSREFYDEAL 575
QLP TV++ A G SLF++L + +LK QYRMH ++ F S FY+ L
Sbjct: 506 QQLPPTVVNQEAAKNGLKISLFEKLIKTYQNDFSSLLKIQYRMHRKIMGFSSIYFYNNYL 565
Query: 576 EDGSDVEDYTTRDW----HEYRCFG--------PFSFFDIHEGK--ESQPAGSGSWINID 621
+ V T D CF P F D E K E AGS S+ N
Sbjct: 566 KAADSVAKNTLSDLGFQLENKSCFPDKSLKAEYPMVFLDTKEMKAEERSFAGSNSYDNPV 625
Query: 622 EVDFVLLLFHKLISMYPQLKSS---SQLAIISPYRHQVKQFQERFKETFGVESQKVVDIT 678
E + VL L + LKSS ++A+I+ Y+ QV + K K V+I
Sbjct: 626 EAEIVLDLLDR------ALKSSLKEEEIAVIAAYKDQVDFINQHNK-------FKNVEID 672
Query: 679 TVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKH 738
TVD QGREK++ IFS VR++ +IGFL D RR+NV +TRAK ++ VG +ST+ +
Sbjct: 673 TVDAFQGREKEMIIFSAVRSNQDNNIGFLRDLRRLNVALTRAKRKMIFVGDSSTICKYNV 732
Query: 739 WNNLVKSAEKQDCLFRV 755
+ L+K +K +++
Sbjct: 733 YEKLLKYIKKSGFYYKL 749
Score = 43.1 bits (100), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 24/39 (61%)
Query: 255 ENHNASQLEAIHEGLLRKAFVLIQGPPGTGKTQTILGLL 293
EN N SQ AI L K LIQGPPGTGKT T + ++
Sbjct: 262 ENFNHSQKNAIKNSLQAKKLYLIQGPPGTGKTLTAVEII 300
>gi|183229840|ref|XP_657569.2| regulator of nonsense transcripts [Entamoeba histolytica HM-1:IMSS]
gi|169803118|gb|EAL52192.2| regulator of nonsense transcripts, putative [Entamoeba histolytica
HM-1:IMSS]
Length = 966
Score = 159 bits (403), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 105/320 (32%), Positives = 167/320 (52%), Gaps = 20/320 (6%)
Query: 458 ILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDP 517
IL+ VCSTL+ + L L F I+DEAAQ++EP TL + ++ L+GD
Sbjct: 623 ILSGTECVCSTLTICTRSTL--LKQKFFASIVDEAAQSLEPETLAGII-NVRKTVLIGDI 679
Query: 518 VQLPATVISPVAEHLGYGTSLFKRLQRAGYPVK--MLKTQYRMHPEVRSFPSREFYDEAL 575
QL T +S A G+ S+F+R A +K MLKTQYRMHP + F ++ FY L
Sbjct: 680 QQLQPTCLSTEAREAGFQKSMFERFM-ANTQIKRTMLKTQYRMHPAISEFSNKMFYSSKL 738
Query: 576 EDGSDVED-YTTRDWHEYRCF-GPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKL 633
E+G ++D + R + + + P F + +G E + S+ N EV + + KL
Sbjct: 739 ENGVSIDDRFDNRIINFFPDYTNPIMFINC-DGTEHYGSSGTSYNNAGEVQIIQEVVEKL 797
Query: 634 ISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIF 693
++ + +++ IISPY+ Q QE + + + + +DG QG EK+ IF
Sbjct: 798 LNNDIE---ENEIGIISPYQAQ----QELISQYVSTK----IKVANIDGFQGNEKEYIIF 846
Query: 694 SCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLF 753
SCVR++ +GF+ DY+R+NV +TRAK ++++G TL K WN L+ + LF
Sbjct: 847 SCVRSNQTLGVGFVNDYKRLNVALTRAKRGLIIIGNIPTLVTSKVWNMLIHHFYLKKALF 906
Query: 754 RVSKPYASFFSDENLESMRK 773
+ + ++ EN E +
Sbjct: 907 ELKEHKFVQYNVENQEEFNR 926
>gi|389581976|dbj|GAB64376.1| erythrocyte membrane-associated antigen [Plasmodium cynomolgi strain
B]
Length = 2167
Score = 159 bits (403), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 115/382 (30%), Positives = 193/382 (50%), Gaps = 41/382 (10%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQKR 434
++L A SN A + +V G++ NI++ VR+G + + AI K
Sbjct: 1706 KILAVADSNVAANNLV-----EGLKKRNIQA-----VRVGAGSDSDFHEEAIMDFHRYKD 1755
Query: 435 DDSAADKQKHGATRKDRDSIRSAILNEAV----IVCSTLSFSGSALLSKLNHGFDVVIID 490
K + +K+ +++ + EAV +V +T SG + N F+ VIID
Sbjct: 1756 ----LLKLRKNNLQKEAKVMKALLFLEAVKKYNVVIATCVGSGHEIFD--NEKFERVIID 1809
Query: 491 EAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGY-PV 549
E AQ++EP+ L+PL C + L+GD QLP T+IS A LG SL +R A PV
Sbjct: 1810 ECAQSIEPSNLIPLGHNCNNLVLIGDHKQLPPTIISSDATKLGLDRSLLERFVMAKIAPV 1869
Query: 550 KMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRD--------WHEYRCFGPFSFF 601
+L TQ RMH + +FP+ FYD L+ E+ T + W +C +F
Sbjct: 1870 HLLTTQRRMHLSICTFPNIHFYDNKLK----TENVTEENRPIIKGFLWPNPKC--RLAFI 1923
Query: 602 DIHEGKES---QPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQ 658
D+ GK + + S N+ E++ ++ + +++ S ++ I++ Y Q +
Sbjct: 1924 DVSLGKPGSKFENSYGTSKFNLYEIEPLISVLKSIVN--EGCVSVDEIGILTAYDAQKVK 1981
Query: 659 FQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGIT 718
++ ++ F E+ ++I ++DG QG+EKD+ +FS VR++ +GFL D RR+NV +T
Sbjct: 1982 LKKAVQDAFPYEAACRIEIDSIDGFQGKEKDLILFSAVRSNANNELGFLKDARRLNVMLT 2041
Query: 719 RAKSSILVVGCASTLRED-KHW 739
RAK +++ G TL D ++W
Sbjct: 2042 RAKRGVILFGDQFTLANDPENW 2063
>gi|321451493|gb|EFX63126.1| hypothetical protein DAPPUDRAFT_335901 [Daphnia pulex]
Length = 1238
Score = 159 bits (403), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 119/361 (32%), Positives = 178/361 (49%), Gaps = 43/361 (11%)
Query: 424 VAIDHLVEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKL--- 480
V ID V + R + + + T K+R R ++L A I+CST++ S + L
Sbjct: 776 VQIDQ-VGRCRQECYENHVNYFHTEKERFETRRSLLFNAQIICSTINSCRSGEMENLFLE 834
Query: 481 ---NHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTS 537
++ F IIDEA+Q EP +L PLA G ++ L+GDP QLPATV+S A+ + S
Sbjct: 835 ETPDNRFLCCIIDEASQCTEPESLTPLAFGISKLVLIGDPDQLPATVMSTFAQKKRFDQS 894
Query: 538 LFKRLQRAGYPVK-------MLKTQYRMHPEVRSFPSREFYD------EALEDGSDVEDY 584
LF RL V ML+TQYRM + +PSR FY E L+ DY
Sbjct: 895 LFNRLHATRLLVNQESEGVIMLQTQYRMASSICEWPSRYFYGGKIVTAEGLKRNGPCYDY 954
Query: 585 TTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSS 644
D+ +G E S+ N E V+ KLI P L
Sbjct: 955 --------------RVLDVTDGIEQ--LEEQSFKNEKEA-VVVANIVKLILNSP-LTVGK 996
Query: 645 QLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKK-- 702
+ +I+ Y+ Q K E+ +E G + K +D+ TVD QGRE D+ + SCVRA K
Sbjct: 997 SVGVITFYQSQKKCISEKLREV-GCRASK-IDLNTVDSFQGRETDIVVISCVRAQQLKKL 1054
Query: 703 -SIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLFRVSKPYAS 761
SIGF+ +RMNV +TR K ++++ G TL++++ W +++ +A ++ VS +S
Sbjct: 1055 DSIGFIGSLQRMNVAMTRPKETLILCGHFETLQKNETWRDMINNARSRNLAHVVSSNSSS 1114
Query: 762 F 762
+
Sbjct: 1115 Y 1115
Score = 43.9 bits (102), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 9/69 (13%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGL--KAHHSVNSVAIDHLVEQ 432
R+LVCAPSN A+DE+ RL++ R + +IVRIG+ V ++++D+L +
Sbjct: 662 RILVCAPSNHAIDELATRLMDA-------RDWGSRIVRIGVSESMRPEVRNISLDNLTRK 714
Query: 433 KRDDSAADK 441
+ D+ +
Sbjct: 715 IQQDAPTTR 723
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 106/268 (39%), Gaps = 35/268 (13%)
Query: 40 NSKKVDRGKLGLREVKDTYKDVDDYLATFEPLLFEEVKAQIIQKKDEEEVQEWKLRLVME 99
NSK + KL L V Y ++DY + F PL+ EV A + + +++ + L+
Sbjct: 400 NSKSLP--KLSLLPVLSNYATLEDYCSIFTPLMLHEVWAGLCKDVHTSKLETLET-LIYS 456
Query: 100 CGEADGFHLPSVTYEADEVESISPNDLLLLSKEEFKEGS-TFPTTYAFALVEHCQANLLR 158
+D F L + E++SP + + S P FA+ E + R
Sbjct: 457 KTISDDFALL-------QCEALSPTRIFEMELVSLTVASPQKPPVEIFAVAEQVRYWWKR 509
Query: 159 LRMYLAGEVIHINKDAVKSQRLLNIHSLITSSVSAVEKRLFSLKICSLSTIAREYLALRS 218
R + ++ I + N+ + + + + KI L T ++++
Sbjct: 510 ERGEIDPRLLAICQRPNIPITSFNLRIKMYHVLPQLNQVFTVTKITRLKTAMKQFILNAE 569
Query: 219 VGSLPFKDLILSASEKSSGSQDQSWKIPGLLHEYIKENH---NASQLEAIHEGLLRKAFV 275
+ P + I+ S+ + L +ENH NASQ +A+ + K V
Sbjct: 570 LARSPLCNAIIQPSDHVDAFK---------LETVNQENHTVLNASQFKAVES--IAKTVV 618
Query: 276 ----------LIQGPPGTGKTQTILGLL 293
L+ GPPGTGK++ + ++
Sbjct: 619 YSSDKQPKISLVHGPPGTGKSRVTVEMI 646
>gi|247494016|ref|NP_932114.2| uncharacterized protein C4orf21 homolog [Mus musculus]
Length = 1863
Score = 159 bits (403), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 117/394 (29%), Positives = 196/394 (49%), Gaps = 41/394 (10%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTG----IRDENIRSYTPKIVRIGLKAHHSVNSVAIDHL- 429
+VLV + +N A+D ++L LL+ G IR ++R ++ L A S + L
Sbjct: 1451 KVLVSSSTNVAVDRVLLGLLSLGFEKFIRVGSVRKIAKPVLPYSLHAGSDNESEQLKELN 1510
Query: 430 ---------VEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKL 480
+E+ + ++ K G R +L + +V T + L+ L
Sbjct: 1511 ALLKEELTPIERVYVRKSIEQHKLGTNR--------VLLKQVRVVGVTCAACAFPCLNDL 1562
Query: 481 NHGFDVVIIDEAAQAVEPATLVPLAT-GCKQVFLVGDPVQLPATVISPVAEHL-GYGTSL 538
F VV++DE +Q EPA+L+P+A C+++ LVGDP QLP T+ A H G +L
Sbjct: 1563 K--FPVVVLDECSQMTEPASLLPIARFQCEKLILVGDPKQLPPTIQGSDAAHENGLEQTL 1620
Query: 539 FKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDG-SDVEDYTTRDWHEYRCFGP 597
F RL G+ +L+TQYR HP + + + FY+ +L +G S+ E +W CF
Sbjct: 1621 FDRLCLMGHKPVLLRTQYRCHPAISAIANDLFYEGSLVNGISERERSPVLEWLPTLCF-- 1678
Query: 598 FSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVK 657
+++ G E Q S++N+ E F L L L++ + S + +I+ Y+ Q+
Sbjct: 1679 ---YNV-TGAE-QVERENSFVNVAEATFTLKLIQSLMASGVE---SCMIGVITLYKSQMY 1730
Query: 658 QFQERFKET-FGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVG 716
+ G K V ++TVD QG EK++ I SCVR + +GF+ +RMNV
Sbjct: 1731 KICNLLSAVDVGHPDVKAVQVSTVDAFQGAEKEITILSCVRT---RQVGFIDSEKRMNVA 1787
Query: 717 ITRAKSSILVVGCASTLREDKHWNNLVKSAEKQD 750
+TR + +L+VG S LR+++ W +++ E ++
Sbjct: 1788 LTRGRRHLLIVGSLSCLRKNRLWGRVIQHCEGRE 1821
>gi|432328902|ref|YP_007247046.1| DNA helicase, putative [Aciduliprofundum sp. MAR08-339]
gi|432135611|gb|AGB04880.1| DNA helicase, putative [Aciduliprofundum sp. MAR08-339]
Length = 650
Score = 159 bits (403), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 122/341 (35%), Positives = 180/341 (52%), Gaps = 43/341 (12%)
Query: 432 QKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDE 491
Q+R D + K ++R IR +L+ A ++C+T S +G +L L FD V+IDE
Sbjct: 332 QRRIDEYVKRAKK---MEERAIIR--VLDNADVICTTNSTAGGEMLRDLK--FDFVVIDE 384
Query: 492 AAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVK- 550
A QAVEP+ L+P+ G + + + GD QLP TV+S A+ L +LF+RL + YP
Sbjct: 385 ATQAVEPSCLIPMLKGTR-ILMAGDHKQLPPTVMSYDAKALQL--TLFERLIKI-YPQAS 440
Query: 551 -MLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRD-------WHEYR-CFGP---F 598
L+ QYRM+ ++ FPS FY LE V+D T D E R P
Sbjct: 441 ITLRIQYRMNEKIMEFPSNMFYRGLLEAHRTVKDRTIADVGIDPSRISEMRDICNPEEVI 500
Query: 599 SFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQ 658
F D+ E +E Q GS S+ N E V + + L+ + + K + II+PY QV
Sbjct: 501 IFVDL-ETEEEQRRGSTSYQNPGEARCVTRIVNCLLKIGLKEK---HIGIITPYDDQVDL 556
Query: 659 FQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGIT 718
+ + + ++I +VDG QGREK+V + S VRA+D+ +GFL D RR+NV IT
Sbjct: 557 LK-------SIIPNEDLEIKSVDGFQGREKEVIVISFVRANDRGELGFLTDLRRLNVAIT 609
Query: 719 RAKSSILVVGCASTLREDKHWNNLVKSAE--------KQDC 751
RAK +++VG + TLR +++L+ E K DC
Sbjct: 610 RAKRKLIIVGNSKTLRAHPVYDSLIDYIEHRGKVLKMKDDC 650
>gi|67472499|ref|XP_652053.1| regulator of nonsense transcripts [Entamoeba histolytica HM-1:IMSS]
gi|56468857|gb|EAL46665.1| regulator of nonsense transcripts, putative [Entamoeba histolytica
HM-1:IMSS]
Length = 931
Score = 159 bits (403), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 107/320 (33%), Positives = 166/320 (51%), Gaps = 20/320 (6%)
Query: 458 ILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDP 517
IL+ VCSTLS L L F I+DEAAQ++EP TL + ++ L+GD
Sbjct: 541 ILSGIECVCSTLSLCTRPTL--LKQKFFASIVDEAAQSLEPETLAGII-NVRKTVLIGDI 597
Query: 518 VQLPATVISPVAEHLGYGTSLFKRLQRAGYPVK--MLKTQYRMHPEVRSFPSREFYDEAL 575
QL T +S A G+ S+F+R A +K MLKTQYRMHP + F ++ FY L
Sbjct: 598 QQLQPTCLSTEAREAGFQKSMFERFM-ANTQIKRTMLKTQYRMHPAISEFSNKMFYSSKL 656
Query: 576 EDGSDVED-YTTRDWHEYRCF-GPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKL 633
E+G +D + R + + + P F + +G E + S+ N EV + + KL
Sbjct: 657 ENGVSSKDRFDDRIINFFPDYTNPIMFINC-DGTEHYGSSGTSYNNAGEVQIIQEVVEKL 715
Query: 634 ISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIF 693
++ + +++ IISPY+ Q QE + + + + +DG QG EK+ IF
Sbjct: 716 LNNDIE---ENEIGIISPYQAQ----QELISQYVSTK----IKVANIDGFQGNEKEYIIF 764
Query: 694 SCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLF 753
SCVR++ +GF+ DY+R+NV + RAKS ++++G TL K WN L+ +D LF
Sbjct: 765 SCVRSNQTLGVGFVNDYKRLNVALKRAKSGLIIIGNIQTLITSKVWNMLIHQFYLRDALF 824
Query: 754 RVSKPYASFFSDENLESMRK 773
+ + ++ EN E +
Sbjct: 825 ELKEHDFVQYNVENQEEFNR 844
>gi|332663425|ref|YP_004446213.1| ATPase AAA [Haliscomenobacter hydrossis DSM 1100]
gi|332332239|gb|AEE49340.1| AAA ATPase [Haliscomenobacter hydrossis DSM 1100]
Length = 634
Score = 159 bits (403), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 124/419 (29%), Positives = 198/419 (47%), Gaps = 74/419 (17%)
Query: 376 VLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIG--LKAHHSVNSVAIDHLVEQK 433
VLV APSN+A+D LL+ + + ++R +VRIG + S+ +++ + Q
Sbjct: 229 VLVTAPSNTAVD-----LLSEKLAELDLR-----VVRIGNISRIDESILRHTLEYQISQH 278
Query: 434 RDDSAADKQKHGAT--RKDRDSIRS---------------------------------AI 458
D K K A R+ + +RS I
Sbjct: 279 PDSKNVKKVKIQAADYRRQANRLRSKRGYEAYEERKRLEQEASELSAWANSLEQRLVDMI 338
Query: 459 LNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPV 518
L+EA ++ TL + +L + F I+DEAAQA+EPAT +P+ K V L GDP
Sbjct: 339 LDEAQVITCTLVGAAHPVLDQ--RKFRTAIVDEAAQALEPATWIPITKASKLV-LTGDPF 395
Query: 519 QLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDG 578
QLP TV S A G+ ++ ++ + V +L QYRM+ + F +R+FY+ L
Sbjct: 396 QLPPTVKSQEAAKKGFNITMIEKCLKRLQQVNLLNIQYRMNEGIMGFSNRQFYNNELMAA 455
Query: 579 SDVEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSG----------SWINIDEVDFVLL 628
+V+D+ + P F D AG G S N +E +
Sbjct: 456 PEVKDHRL----DIAADAPVIFIDT--------AGCGFDEKVHHAYQSKYNPEEFQVLRE 503
Query: 629 LFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREK 688
+++ + + K +AIISPYR Q ++ K+ V + I T+DG QG+EK
Sbjct: 504 HLYQIAEAFLE-KIPPSIAIISPYREQALHMEDELKDDPMVRKLDLT-INTIDGFQGQEK 561
Query: 689 DVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAE 747
D+ S VR++ K IGFL+DYRRMNV +TRA+ +++VG ++T+ +K + + ++ E
Sbjct: 562 DLVFISLVRSNPKGEIGFLSDYRRMNVAMTRARKQLIIVGDSATIGNNKFYRDFLEYCE 620
>gi|359490550|ref|XP_002266964.2| PREDICTED: uncharacterized protein LOC100244982 [Vitis vinifera]
Length = 1076
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 114/352 (32%), Positives = 178/352 (50%), Gaps = 18/352 (5%)
Query: 450 DRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLA-TGC 508
D I+S L A ++ T S SA + ++++IDEAAQ E + +PL +G
Sbjct: 610 DHYRIKSFCLQNATLLFCTAS--SSAKIPVGGKPIELLVIDEAAQLKECESAIPLQISGI 667
Query: 509 KQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSR 568
+ L+GD +QLPA V S ++E +G SLF+RL G+ +L QYRMHP + FP+R
Sbjct: 668 RHAILIGDELQLPAMVKSKISEEAKFGRSLFQRLVLLGHRKHLLNLQYRMHPSISLFPNR 727
Query: 569 EFYDEALEDGSDV-EDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVL 627
EFYD + D +V E R + +G +SF ++ GKE + S N+ EV V
Sbjct: 728 EFYDNLILDAPNVKERKYERSYLHGNMYGSYSFINVAYGKE-EFDYRYSTRNMVEVVVVS 786
Query: 628 LLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERF--KETFGVESQKVVDITTVDGCQG 685
+ L K + IISPY+ QV Q+R K T + + V + +VDG QG
Sbjct: 787 EMVATLAKATKGRKQRVSVGIISPYKAQVYAIQDRLGKKYTSSADGKFSVSVRSVDGFQG 846
Query: 686 REKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKH-WNNLVK 744
E+D+ I S VR + K S+GF+++ +R NV +TRA+ + + G TL W LV
Sbjct: 847 GEEDIIIISTVRCNLKGSVGFISNRQRTNVALTRARYCLWIFGNGPTLEHSGTVWGKLVN 906
Query: 745 SAEKQDCLFRVSKPYASFFSDENLESMRKNATTDNVQGADGHVPHDDETMHY 796
A+ + C F + E ++ + TT V+ + H+ +++ +
Sbjct: 907 DAKDRGC----------FHNAEEDNNLARAITTSLVELGELHLLQKQDSLLF 948
>gi|302143704|emb|CBI22565.3| unnamed protein product [Vitis vinifera]
Length = 960
Score = 159 bits (402), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 114/352 (32%), Positives = 178/352 (50%), Gaps = 18/352 (5%)
Query: 450 DRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLA-TGC 508
D I+S L A ++ T S SA + ++++IDEAAQ E + +PL +G
Sbjct: 466 DHYRIKSFCLQNATLLFCTAS--SSAKIPVGGKPIELLVIDEAAQLKECESAIPLQISGI 523
Query: 509 KQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSR 568
+ L+GD +QLPA V S ++E +G SLF+RL G+ +L QYRMHP + FP+R
Sbjct: 524 RHAILIGDELQLPAMVKSKISEEAKFGRSLFQRLVLLGHRKHLLNLQYRMHPSISLFPNR 583
Query: 569 EFYDEALEDGSDV-EDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVL 627
EFYD + D +V E R + +G +SF ++ GKE + S N+ EV V
Sbjct: 584 EFYDNLILDAPNVKERKYERSYLHGNMYGSYSFINVAYGKE-EFDYRYSTRNMVEVVVVS 642
Query: 628 LLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERF--KETFGVESQKVVDITTVDGCQG 685
+ L K + IISPY+ QV Q+R K T + + V + +VDG QG
Sbjct: 643 EMVATLAKATKGRKQRVSVGIISPYKAQVYAIQDRLGKKYTSSADGKFSVSVRSVDGFQG 702
Query: 686 REKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKH-WNNLVK 744
E+D+ I S VR + K S+GF+++ +R NV +TRA+ + + G TL W LV
Sbjct: 703 GEEDIIIISTVRCNLKGSVGFISNRQRTNVALTRARYCLWIFGNGPTLEHSGTVWGKLVN 762
Query: 745 SAEKQDCLFRVSKPYASFFSDENLESMRKNATTDNVQGADGHVPHDDETMHY 796
A+ + C F + E ++ + TT V+ + H+ +++ +
Sbjct: 763 DAKDRGC----------FHNAEEDNNLARAITTSLVELGELHLLQKQDSLLF 804
>gi|67474564|ref|XP_653031.1| regulator of nonsense transcripts [Entamoeba histolytica HM-1:IMSS]
gi|56469949|gb|EAL47645.1| regulator of nonsense transcripts, putative [Entamoeba histolytica
HM-1:IMSS]
Length = 915
Score = 159 bits (402), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 103/302 (34%), Positives = 161/302 (53%), Gaps = 20/302 (6%)
Query: 458 ILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDP 517
IL+ VCSTLS S+++ L F I+DEAAQ++EP TL + ++ L+GD
Sbjct: 564 ILSGIRCVCSTLSLCTSSIM--LKQKFFASIVDEAAQSLEPETLAGI-INVRKAVLIGDI 620
Query: 518 VQLPATVISPVAEHLGYGTSLFKRLQRAGYPVK--MLKTQYRMHPEVRSFPSREFYDEAL 575
QL T +S A G+ S+F+R A +K MLKTQYRMHP + F ++ FY L
Sbjct: 621 QQLQPTCLSTEAREAGFQKSMFERFM-ANTQIKRTMLKTQYRMHPAISEFSNKMFYSSKL 679
Query: 576 EDGSDVED-YTTRDWHEYRCF-GPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKL 633
E+G +D + R + + + P F + +G E + S+ N EV + + K
Sbjct: 680 ENGVSSKDRFDNRIINFFPDYTNPIMFINC-DGTEQYGSSGTSYNNAGEVQIIQEVVEKF 738
Query: 634 ISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIF 693
+ ++K + ++ IISPY+ Q QE + + + + +DG QG EK+ IF
Sbjct: 739 LK--NKIKEN-EIGIISPYQAQ----QELISQYVSTK----IKVANIDGFQGNEKEYIIF 787
Query: 694 SCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLF 753
SCVR++ +GF+ DY+R+NV +TRAK ++++G TL K WN L+ + LF
Sbjct: 788 SCVRSNQTLGVGFVNDYKRLNVALTRAKRGLIIIGNIPTLVTSKVWNMLIHHFYLKKALF 847
Query: 754 RV 755
+
Sbjct: 848 EL 849
>gi|414884936|tpg|DAA60950.1| TPA: hypothetical protein ZEAMMB73_755312 [Zea mays]
Length = 737
Score = 159 bits (402), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 144/476 (30%), Positives = 213/476 (44%), Gaps = 79/476 (16%)
Query: 314 KRGPELP---MHEKYNHWGRASPWLVGANPRDNIMPIDGDDGFFPTTGNELKPEVVNSSR 370
+RGPE P E ++H S A D P+ G T L +V
Sbjct: 245 RRGPEAPDGGSLETHSHSFDTSQSRALALALDKERPVLVIQGPPGTGKTRLLSYLVARVV 304
Query: 371 RYRVRVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIG--LKAHHSVNSVAIDH 428
R RVLV APSN+A+D + L +G+++ IVR+G + SV +++
Sbjct: 305 RRGERVLVTAPSNAAVDNMAESLSASGLKN---------IVRVGNPSRISPSVAPMSLGQ 355
Query: 429 LVEQKRDDSAAD-KQKHGATRKD-----------------------------RDSIRSAI 458
+V + + + + + A RKD ++++R +
Sbjct: 356 IVATRLEKLTREFETRRSALRKDLKRRVQDGGDGSSVRQQLKRLGKDYRKEKKEAVREVL 415
Query: 459 LNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPV 518
N A +V ST + + L+ FD+VIIDEA QA+EP+ +P+ G K+ L GD
Sbjct: 416 AN-AEVVLSTNTGAADPLVRGTGGCFDLVIIDEAGQAIEPSCWIPMLQG-KRCILAGDHR 473
Query: 519 QLPATVISPVAEHLGYGTSLFKRLQRA--GYPVKMLKTQYRMHPEVRSFPSREFYDEALE 576
QL V+S A G G SL +R G L TQYRMH + S+ S+E YD L
Sbjct: 474 QLAPVVLSREAMEGGLGMSLLERASSLHDGLLATTLTTQYRMHESIASWASKEMYDGLLR 533
Query: 577 DGSDVEDYTTRDWHEY----------------RCFGPFSFFDIHEGKESQPAGSGSWINI 620
V ++ R +G + D E + PAG+GS+ N
Sbjct: 534 SFPSVASRLLVNYPSVKVTWMTQCALLLLDTRRAYGSLNI-DCEESLD--PAGTGSFYNN 590
Query: 621 DEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKE---TFGVESQKVVDI 677
E D V H ++++ + + + SPY QV+ Q+R +E F VE +
Sbjct: 591 GEADIV---AHHVLNLVQCGVPPTSIVVQSPYIAQVQLLQDRLQEYPMAFDVE------V 641
Query: 678 TTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTL 733
+T+D QGRE D + S VR++ +GFLAD RRMNV ITRAKS + VV ST+
Sbjct: 642 STIDSFQGREADAVVISMVRSNSMGEVGFLADRRRMNVAITRAKSHVAVVCDTSTI 697
>gi|392590481|gb|EIW79810.1| P-loop containing nucleoside triphosphate hydrolase protein
[Coniophora puteana RWD-64-598 SS2]
Length = 775
Score = 159 bits (402), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 141/460 (30%), Positives = 202/460 (43%), Gaps = 114/460 (24%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTP-KIVRIG----LKAHHSVNSVAIDHL 429
R+LVC SN A+D I+ RLL + + RIG + AH V ++
Sbjct: 305 RILVCGASNLAVDNILERLLALPAPTSSAAAPAKLTATRIGHPARVMAHEGVLEATLE-- 362
Query: 430 VEQKRDDSAA-----------------DKQKHGATRKDRDSIRS---------------- 456
V R D AA K K GA + R + R
Sbjct: 363 VRAGRSDQAALAKDVKAELEATLDVLSGKGKGGAKARPRGAERRKMWDEVKALRKEYRQR 422
Query: 457 ------AILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQ 510
A+L E+ IV +T +G L NH FDVVIIDEA QA+E VP+ ++
Sbjct: 423 EGGVVRAVLGESQIVLATCHSAGGRQLR--NHSFDVVIIDEATQAMEAVCWVPIFK-AQK 479
Query: 511 VFLVGDPVQLPATVISP----VAEHLGYG--------------------TSLFKRLQRAG 546
+ L GDP+QLP T++S V++ G T+LF RL+R
Sbjct: 480 LILAGDPMQLPPTILSTDKSKVSKKAKDGKVADRKAKRRPGLRPPRSLETTLFDRLERMY 539
Query: 547 YP--VKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYT------TRDWHEY------ 592
P ++L QYRMH ++ +FPS Y L+ V + TR W
Sbjct: 540 GPGIKRLLNVQYRMHAQICAFPSATLYASRLKSAESVSAHLLSDLPGTRAWQAASDAESI 599
Query: 593 -RCFG-PFSFFDI--------------HEGKESQPAGSGSWINIDEVDFVLLLFHKLI-- 634
G P FFD ++ K A GS N +E V +L+
Sbjct: 600 KEVLGTPIVFFDTAGCEFYERLEGSGDNDTKGGGGAEEGSKCNENEAGVVKRWVERLVEA 659
Query: 635 SMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFS 694
+ P SQ+A+I+PY+ QV +ET+G E ++I TVDG QGREK+ + S
Sbjct: 660 GVLP-----SQIAVITPYQAQVTLLTSLLRETYGPE----LEIGTVDGMQGREKEAVVIS 710
Query: 695 CVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLR 734
VR+++K+ +GFL + RR+NV +TRAK + VVG + T++
Sbjct: 711 LVRSNEKREVGFLKEKRRLNVAMTRAKRHLCVVGDSDTVQ 750
>gi|407844923|gb|EKG02202.1| hypothetical protein TCSYLVIO_006784 [Trypanosoma cruzi]
Length = 1985
Score = 159 bits (402), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 133/402 (33%), Positives = 195/402 (48%), Gaps = 59/402 (14%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAHHSVNSVAIDHLVEQKR 434
RVLVCAPSN A+DE++LRL T R + +++R+G++ SV+ ++ L
Sbjct: 1502 RVLVCAPSNCAVDEVLLRLRGTAKRVPQLGDL--QLLRVGVR--DSVDREVLESLPPLFF 1557
Query: 435 DD---------------SAADKQKHGA----TRKDRDSIRSAILNEAVIVCSTLSFSGSA 475
DD S ++G+ +R +IR +L A +VCSTL GS
Sbjct: 1558 DDCVRALADVSNTSHSISTGRVMRNGSGDVLKNSNRQNIRDHVLFGAHVVCSTL---GS- 1613
Query: 476 LLSKLNHG---FDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHL 532
LS+L FDVVI+DEA+Q EP L L K+ LVGD QL TV+ VA
Sbjct: 1614 -LSQLQRADFLFDVVIVDEASQGTEPDVLQALMLAKKRAVLVGDFRQLQPTVLCQVAAAR 1672
Query: 533 GYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEAL----------EDGSDVE 582
G SL +RL G+ L+ QYRMHP++ +FP+R FY + L DGS
Sbjct: 1673 GLKRSLLQRLLHQGHRSYFLREQYRMHPDICAFPNRYFYGKRLLTHASVMARQHDGSSQA 1732
Query: 583 DYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLL---LFHKLISMYPQ 639
D F F D+ +G G S +N E + V+L F ++ + P+
Sbjct: 1733 LPLPTDMGR---VPRFVFVDVQDGLMEWGRGR-SLMNRQEAEAVVLQMRRFRAMLQLTPE 1788
Query: 640 LKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIFSCVRAS 699
+ + + II+ Y+ Q + + + E + + ++TVD QG+EKD+ SCVRA
Sbjct: 1789 -EFARRTGIITFYQAQKEAILQLLLQE---ERRSELQVSTVDSFQGKEKDIIFISCVRAL 1844
Query: 700 DKKS-------IGFLADYRRMNVGITRAKSSILVVGCASTLR 734
S +GFL D+ R+NV +TRAK ++ G T R
Sbjct: 1845 HPASRLDGTAALGFLEDWHRINVSLTRAKEFCVLFGHKKTFR 1886
>gi|190345609|gb|EDK37526.2| hypothetical protein PGUG_01624 [Meyerozyma guilliermondii ATCC
6260]
Length = 650
Score = 159 bits (402), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 125/425 (29%), Positives = 198/425 (46%), Gaps = 60/425 (14%)
Query: 376 VLVCAPSNSALDEIVLRLLNTG-------IRDENIRSYTPKIVRIGLKAHHSVNSVAIDH 428
+LV A SN A+D I +L+ T + +E + Y+ + HH V A+
Sbjct: 232 ILVVAASNIAIDNIAEKLIKTHGREILRIVSNEKEKEYSRDHPLASICLHHKVYD-ALPQ 290
Query: 429 LVEQKRDD-----SAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHG 483
++Q DD S + + + + +A ++ +T +G L +
Sbjct: 291 QMKQTVDDLRRPFSNVSQNSYKKLLTQQIKLSDMFTAQAKVIFTTTVVAGGNQLKSVKK- 349
Query: 484 FDVVIIDEAAQAVEPATLVPLAT-GCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKR- 541
VVI+DEA Q+ EP TL+PL+ G + VGD QL + + P SLF+R
Sbjct: 350 LPVVIMDEATQSSEPTTLIPLSMPGVDKFVFVGDQRQLSSFSMVP-----NLSLSLFERV 404
Query: 542 -LQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSF 600
L + ML TQYRMHP + FP +FYDE L+DG +D + E P F
Sbjct: 405 LLNNSYRNPHMLDTQYRMHPAISEFPRVKFYDELLKDGITADDRAMDNIPE----NPVYF 460
Query: 601 FDIHEGKESQPAGSG-------SWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYR 653
+D G ++ N++E+++V + KLI Y + S S + +I+PYR
Sbjct: 461 WDTKGKAREDRVRYGFREDRGYTYSNLNEIEYVTKVLMKLI--YDKQVSKSDIGVITPYR 518
Query: 654 HQVKQFQERF---------KETFGVE---------SQKV-------VDITTVDGCQGREK 688
Q + KE VE S+ V + I ++D QGREK
Sbjct: 519 GQRDLISNQLVKNDLINPEKEEVQVEVDRDDIYNESKPVTVHLVSGIMIASIDAFQGREK 578
Query: 689 DVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEK 748
+ + SCVR+++++ IGFL D RR+NV +TRAK ++++G S L+ D+ W ++ EK
Sbjct: 579 NFLVMSCVRSNEERKIGFLNDKRRLNVALTRAKYGLILIGDVSCLKGDELWREYLEFLEK 638
Query: 749 QDCLF 753
+ +F
Sbjct: 639 KGSVF 643
>gi|167384737|ref|XP_001737082.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165900358|gb|EDR26702.1| hypothetical protein EDI_272190 [Entamoeba dispar SAW760]
Length = 1001
Score = 159 bits (402), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 106/302 (35%), Positives = 161/302 (53%), Gaps = 20/302 (6%)
Query: 458 ILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDP 517
IL VCSTL+ + L L F I+DEAAQ++EP TL + ++ L+GD
Sbjct: 607 ILKGIECVCSTLTTCTRSTL--LKQKFFASIVDEAAQSLEPETLAGII-NVRKAVLIGDI 663
Query: 518 VQLPATVISPVAEHLGYGTSLFKRLQRAGYPVK--MLKTQYRMHPEVRSFPSREFYDEAL 575
QL T +S A G+ S+F+R A +K MLKTQYRMHP + F ++ FY L
Sbjct: 664 QQLQPTCLSTEAREAGFQKSMFERFM-ANTQIKRTMLKTQYRMHPAIVEFSNKMFYSSKL 722
Query: 576 EDGSDVED-YTTRDWHEYRCF-GPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKL 633
E+G ED + +R + + + P F + +G+E + S+ N EV L++ H +
Sbjct: 723 ENGVSNEDRFDSRIINFFPDYTNPIMFINC-DGREECGSSGTSYNNEGEV---LIIKHIV 778
Query: 634 ISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFGVESQKVVDITTVDGCQGREKDVAIF 693
+ +++ IISPY+ Q QE + + + + +DG QG EK+ IF
Sbjct: 779 GGLLKNKVKENEIGIISPYQAQ----QELISQCVSTK----IKVANIDGFQGNEKEYIIF 830
Query: 694 SCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLF 753
SCVR++ IGF++DY+R+NV +TRAK ++V+G TL K W+ LV +D LF
Sbjct: 831 SCVRSNQTLGIGFVSDYKRLNVALTRAKCGLIVIGNIQTLIGSKVWSMLVHHFYLRDALF 890
Query: 754 RV 755
+
Sbjct: 891 EL 892
>gi|326800123|ref|YP_004317942.1| ATPase AAA [Sphingobacterium sp. 21]
gi|326550887|gb|ADZ79272.1| AAA ATPase [Sphingobacterium sp. 21]
Length = 630
Score = 159 bits (401), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 130/417 (31%), Positives = 202/417 (48%), Gaps = 53/417 (12%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRS---YTPKIVRIGLKAHHSVNSVAIDHLVE 431
++LV APSN+A+D + +LL I I S TP+++ L S S + E
Sbjct: 221 QLLVVAPSNTAVDLLTDQLLKAQINVTRIGSPSRVTPELLHATLDEQISQTS----SIKE 276
Query: 432 QKRDDSAADKQKHGATRKDRD-----------------------------SIRSAILNEA 462
K+ A++ + A R R+ + S I N
Sbjct: 277 VKKIRKRANQFREMARRYKRNFGKEERIQRQTLFAEAAKLIKEADALEQYATESVIKNAQ 336
Query: 463 VIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDPVQLPA 522
VI T + G+ S N F+ VIIDEAAQA+EPA +P+ K++ L GD QLP
Sbjct: 337 VI---TATLVGAGHYSIKNICFEAVIIDEAAQALEPACWIPILKA-KKLILAGDHQQLPP 392
Query: 523 TVISPVAEHLGYGTSLFKRLQRAGYPVK--MLKTQYRMHPEVRSFPSREFYDEALEDGSD 580
T+ S A + G +L ++ YP ML+ QYRMH + SF S++FY +L +
Sbjct: 393 TIKSVSAANQGLKETLLEKCIHL-YPQSGVMLQEQYRMHTSIMSFSSQKFYQSSLIAHNS 451
Query: 581 VEDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKL---ISMY 637
V + + P F D + GS N++E FVL L +S +
Sbjct: 452 VANTLL-----FPNDQPLQFIDTVGCGFDERDDEGSIYNLEEASFVLHYLSMLSTSLSQH 506
Query: 638 PQLKSSSQLAIISPYRHQVKQFQERFK-ETFGVESQKVVDITTVDGCQGREKDVAIFSCV 696
++ ++AIISPY QV +F+ + + + KV I T+DG QG+E+D+ I S
Sbjct: 507 YSPENYPRIAIISPYASQVDKFKALLEADPLSIYKDKVT-INTIDGFQGQERDIVIISLT 565
Query: 697 RASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKHWNNLVKSAEKQDCLF 753
R++ ++ IGFL+D RRMNV +TRAK +++VG + TL + + +L+ +EK+ +
Sbjct: 566 RSNQERKIGFLSDIRRMNVAMTRAKKKLVMVGDSLTLSKLPFYADLITYSEKEHAYY 622
>gi|321479359|gb|EFX90315.1| hypothetical protein DAPPUDRAFT_309786 [Daphnia pulex]
Length = 1738
Score = 159 bits (401), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 111/337 (32%), Positives = 171/337 (50%), Gaps = 30/337 (8%)
Query: 443 KHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKL------NHGFDVVIIDEAAQAV 496
K+ + K+R +++ +++ A I+C+TL+ S + L + F I+DEA+Q
Sbjct: 1400 KYFNSDKERLAMKKHLISRAQIICTTLNSCRSREMETLFIEERSSKSFLCCILDEASQCT 1459
Query: 497 EPATLVPLATGCKQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRL--------QRAGYP 548
EP +L PLA G ++ L+GDP QLPATV S VA + SLF R +
Sbjct: 1460 EPESLTPLAFGISKLVLIGDPDQLPATVTSQVAAKNRFDQSLFNRFYSNRMITNRENEEG 1519
Query: 549 VKMLKTQYRMHPEVRSFPSREFYDEALEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKE 608
V ML TQYRM P + +PS+ FY L + +EYR ++ +G E
Sbjct: 1520 VMMLNTQYRMAPSICEWPSKYFYGGKLVTAEGL--IRNGPCYEYR------VLNVIDGLE 1571
Query: 609 SQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKETFG 668
S+ N E V + LI P + S + +I+ YR Q + ++ E
Sbjct: 1572 Q--LADQSFKNEKEATLVAKIVM-LIVNSPLTRGKS-VGVITFYRSQQQCIVKKMTEEVN 1627
Query: 669 VESQKVVDITTVDGCQGREKDVAIFSCVRASDKKS----IGFLADYRRMNVGITRAKSSI 724
+ V++ TVD QGREKD+ I SCVRA + ++ IGF++ +RMNV +TRAK S+
Sbjct: 1628 RINASRVEVNTVDSFQGREKDIVIVSCVRAREVRNLGGDIGFVSSLQRMNVAMTRAKESL 1687
Query: 725 LVVGCASTLREDKHWNNLVKSAEKQDCLFRVSKPYAS 761
+V G TL+ ++ W +L+ +A +D V+ Y S
Sbjct: 1688 IVCGHFQTLQMNETWQDLINNARSRDVAHVVTSDYTS 1724
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 54/97 (55%), Gaps = 8/97 (8%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKA--HHSVNSVAIDHLVEQ 432
R+LVCAPSN+A+DEI RL+ RDE Y IVRIG+ A H +V +++D L +
Sbjct: 1265 RILVCAPSNNAIDEIANRLMIA--RDEKKSRYN--IVRIGVLASMHPNVARISLDELTRK 1320
Query: 433 KRDDSAA--DKQKHGATRKDRDSIRSAILNEAVIVCS 467
+ D+ A D + G R + + S N+ ++ S
Sbjct: 1321 FQRDTIATKDSPESGKLRTLTEELNSLRKNKTSLIAS 1357
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 131/308 (42%), Gaps = 44/308 (14%)
Query: 14 IFRFCKIILGWDYFRLVKESQERNDK-----NSKKVDRGK----LGLREVKDTYKDVDDY 64
++R C W Y + ++ +++ND N+ + + G+ L L V Y ++ Y
Sbjct: 966 LYRIC----NWCYDWIEEQKKQKNDVPPPLLNALQRENGRSLPELSLLPVVSAYDSLESY 1021
Query: 65 LATFEPLLFEEVKAQIIQKKDEEEVQEWKLRLVMECGE--ADGFHLPSVTYEADEVESIS 122
+ F PL+ E A + KD E Q +R ++ DGF L + + + I
Sbjct: 1022 CSIFTPLMLHETWASLC--KDIETSQHDSIRPLIYSKPKFCDGFAL----LQCEALSPIR 1075
Query: 123 PNDLLLLSKEEFKEGSTFPTTYAFALVEHCQANLLRLRMYLAGEVIHINKDAVKSQRLLN 182
D+ L++ P + F + E R + + V R+
Sbjct: 1076 IIDMELVTLTVHISPQKPPVKF-FGVAEQVVTRNWRAEDVDPRLLETCQRQNVLYFRMSF 1134
Query: 183 IHSLITSSVSAVEKRLFSL-KICSLSTIAREYLALRSVGSLPFKDLILSASEKSSGSQDQ 241
+ + S+V ++FS+ KI L+T+ ++++ + P D+IL S+
Sbjct: 1135 VLWIKMSNVPKELDKIFSVTKISRLNTVVKQFILNAELARSPLCDVILHPSDYV-----D 1189
Query: 242 SWKIPGLLHEYIKENH---NASQLEAIHEGLLRKAFV---------LIQGPPGTGKTQTI 289
++K+ + ++ENH N Q +A+ E + R L+QGPPGTGK+ I
Sbjct: 1190 AFKLDTV---DVEENHPVLNPCQYQAV-ESITRTMVCASDREPKVALLQGPPGTGKSHVI 1245
Query: 290 LGLLSAIL 297
+ L+S ++
Sbjct: 1246 VELISRMM 1253
>gi|302309402|ref|NP_986774.2| AGR108Cp [Ashbya gossypii ATCC 10895]
gi|299788342|gb|AAS54598.2| AGR108Cp [Ashbya gossypii ATCC 10895]
gi|374110024|gb|AEY98929.1| FAGR108Cp [Ashbya gossypii FDAG1]
Length = 930
Score = 159 bits (401), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 116/318 (36%), Positives = 162/318 (50%), Gaps = 33/318 (10%)
Query: 458 ILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLA-TGCKQVFLVGD 516
I+++A ++ +T +G+ + KL VI+DEA QA E +TLVPLA G +++ LVGD
Sbjct: 623 IVSDANVLLATNISAGNRSIRKLPE-VPTVIMDEATQATEASTLVPLALAGIQKLVLVGD 681
Query: 517 PVQLPATVISPVAEHLGYGTSLFKRL--QRAGYPVKMLKTQYRMHPEVRSFPSREFYDEA 574
QLP P A TSLF R+ + ++ LK QYRMHP + FP+ +FYD
Sbjct: 682 EKQLP-----PFALSRNPKTSLFNRVVTRSPAEDLQFLKIQYRMHPAICEFPNMQFYDNR 736
Query: 575 LEDGSDVEDYTTRDWHEYRCFGPFSFFDIHEGKE--SQPAGSG--SWINIDEVDFVLLLF 630
L +G ED R W + P F DI E Q A S SW N+ E DFV
Sbjct: 737 LRNGVTPED---RSWLGVQ--EPVVFIDIPSSAERRGQAAASQDMSWCNLAEADFVCATL 791
Query: 631 HKLISMYPQLKSSSQLAIISPYRHQVKQFQERFKE----TFGVESQKVVD-------ITT 679
KL+S + SQ+ +I+PY Q R V +V D + +
Sbjct: 792 RKLVSK--KHVPPSQIGVITPYVAQRDAIASRLARDTTLAAHVTMHEVADPDSKQLMVAS 849
Query: 680 VDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTL-REDKH 738
VD QG E+ IFSCVR++ +GF++D RRMNV +TRA++ ++VVG A TL + K
Sbjct: 850 VDAFQGHERAFIIFSCVRSNSDGQLGFVSDRRRMNVALTRARNGLIVVGHADTLAKGSKI 909
Query: 739 WNNLVKSAEKQDCLFRVS 756
W + +D L R S
Sbjct: 910 WRAYITYLRSRD-LVRTS 926
>gi|380772504|gb|AFE61892.1| hypothetical protein [Mus musculus]
Length = 1843
Score = 159 bits (401), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 117/394 (29%), Positives = 196/394 (49%), Gaps = 41/394 (10%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTG----IRDENIRSYTPKIVRIGLKAHHSVNSVAIDHL- 429
+VLV + +N A+D ++L LL+ G IR ++R ++ L A S + L
Sbjct: 1431 KVLVSSSTNVAVDRVLLGLLSLGFEKFIRVGSVRKIAKPVLPYSLHAGSDNESEQLKELN 1490
Query: 430 ---------VEQKRDDSAADKQKHGATRKDRDSIRSAILNEAVIVCSTLSFSGSALLSKL 480
+E+ + ++ K G R +L + +V T + L+ L
Sbjct: 1491 ALLKEELTPIERVYVRKSIEQHKLGTNR--------VLLKQVRVVGVTCAACAFPCLNDL 1542
Query: 481 NHGFDVVIIDEAAQAVEPATLVPLAT-GCKQVFLVGDPVQLPATVISPVAEHL-GYGTSL 538
F VV++DE +Q EPA+L+P+A C+++ LVGDP QLP T+ A H G +L
Sbjct: 1543 K--FPVVVLDECSQMTEPASLLPIARFQCEKLILVGDPKQLPPTIQGSDAAHENGLEQTL 1600
Query: 539 FKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALEDG-SDVEDYTTRDWHEYRCFGP 597
F RL G+ +L+TQYR HP + + + FY+ +L +G S+ E +W CF
Sbjct: 1601 FDRLCLMGHKPVLLRTQYRCHPAISAIANDLFYEGSLVNGISERERGPVLEWLPTLCF-- 1658
Query: 598 FSFFDIHEGKESQPAGSGSWINIDEVDFVLLLFHKLISMYPQLKSSSQLAIISPYRHQVK 657
+++ G E Q S++N+ E F L L L++ + S + +I+ Y+ Q+
Sbjct: 1659 ---YNV-TGAE-QVERENSFVNVAEATFTLKLIQSLMASGIE---SCMIGVITLYKSQMY 1710
Query: 658 QFQERFKET-FGVESQKVVDITTVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVG 716
+ G K V ++TVD QG EK++ I SCVR + +GF+ +RMNV
Sbjct: 1711 KICNLLSAVDVGHPDVKAVQVSTVDAFQGAEKEITILSCVRT---RQVGFIDSEKRMNVA 1767
Query: 717 ITRAKSSILVVGCASTLREDKHWNNLVKSAEKQD 750
+TR + +L+VG S LR+++ W +++ E ++
Sbjct: 1768 LTRGRRHLLIVGSLSCLRKNRLWGRVIQHCEGRE 1801
>gi|147842150|emb|CAN62644.1| hypothetical protein VITISV_039594 [Vitis vinifera]
Length = 1003
Score = 159 bits (401), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 108/308 (35%), Positives = 161/308 (52%), Gaps = 8/308 (2%)
Query: 450 DRDSIRSAILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLA-TGC 508
D I+S L A ++ T S SA + ++++IDEAAQ E + +PL +G
Sbjct: 509 DHYRIKSFCLQNATLLFCTAS--SSAKIPVGGKPIELLVIDEAAQLKECESAIPLQISGI 566
Query: 509 KQVFLVGDPVQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSR 568
+ L+GD +QLPA V S ++E +G SLF+RL G+ +L QYRMHP + FP+R
Sbjct: 567 RHAILIGDELQLPAMVKSKISEEAKFGRSLFQRLVLLGHRKHLLNLQYRMHPSISLFPNR 626
Query: 569 EFYDEALEDGSDV-EDYTTRDWHEYRCFGPFSFFDIHEGKESQPAGSGSWINIDEVDFVL 627
EFYD + D +V E R + +G +SF ++ GKE + S N+ EV V
Sbjct: 627 EFYDNLILDAPNVKERKYERSYLHGNMYGSYSFINVAYGKE-EFDYRYSTRNMVEVVVVS 685
Query: 628 LLFHKLISMYPQLKSSSQLAIISPYRHQVKQFQERF--KETFGVESQKVVDITTVDGCQG 685
+ L K + IISPY+ QV Q+R K T + + V + +VDG QG
Sbjct: 686 EMVATLAKATKGRKQRVSVGIISPYKAQVYAIQDRLGKKYTSSADGKFSVSVRSVDGFQG 745
Query: 686 REKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKH-WNNLVK 744
E+D+ I S VR + K S+GF+++ +R NV +TRA+ + + G TL W LV
Sbjct: 746 GEEDIIIISTVRCNLKGSVGFISNRQRTNVALTRARYCLWIFGNGPTLEHSGTVWGKLVN 805
Query: 745 SAEKQDCL 752
A+ + C
Sbjct: 806 DAKDRGCF 813
>gi|124009432|ref|ZP_01694109.1| dna-binding protein smubp-2 [Microscilla marina ATCC 23134]
gi|123984980|gb|EAY24938.1| dna-binding protein smubp-2 [Microscilla marina ATCC 23134]
Length = 649
Score = 159 bits (401), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 136/425 (32%), Positives = 198/425 (46%), Gaps = 76/425 (17%)
Query: 375 RVLVCAPSNSALDEIVLRLLNTGIRDENIRSYTPKIVRIGLKAH-------HSVNSVAID 427
+VLV APSN+A+D + RLL G+ ++R+G A S+ S
Sbjct: 228 QVLVTAPSNTAVDLLTKRLLAKGV----------SVIRVGNPARVNEDLIPFSLESQIAQ 277
Query: 428 H----LVEQKRDDS-----AADKQKHGATRKDRDS---------------------IRSA 457
H L+++ R D+ A K K +++R+ I +
Sbjct: 278 HPDYKLLKKIRRDADEYKKMAAKYKRNFGKEEREQRKLMFAEASKLKHEAYALEKYIVDS 337
Query: 458 ILNEAVIVCSTLSFSGSALLSKLNHGFDVVIIDEAAQAVEPATLVPLATGCKQVFLVGDP 517
+LN +V +TL S + + F V IDEA QA+EPA +PL + VF GD
Sbjct: 338 LLNNTQVVTATLVGSVNKFIR--YRRFSTVFIDEAGQALEPACWIPLLKSERVVF-AGDH 394
Query: 518 VQLPATVISPVAEHLGYGTSLFKRLQRAGYPVKMLKTQYRMHPEVRSFPSREFYDEALED 577
QLP T+ S A G +LF+++ + MLKTQYRMH + F ++EFY L
Sbjct: 395 CQLPPTIKSFDAAKGGLTETLFEQVIKKQAVDVMLKTQYRMHEHIMQFSNKEFYQGELLA 454
Query: 578 GSDVED---YTTRDWHEYRCFGPFSFFDIHEG--KESQPAGSGSWINIDEVDFVLLLFHK 632
V + + D P F D +E A +GS N DE +LL H
Sbjct: 455 ADTVVNHRLFAHADLQGEMINQPVEFIDTAGCGFEEKTMAETGSKYNPDEAG--ILLKH- 511
Query: 633 LISMYPQLKSSSQLA-------------IISPYRHQVKQFQERFKETFGV-ESQKVVDIT 678
+ QL + QLA IISPY+ QVK +E F E + E DI
Sbjct: 512 ----WIQLATQLQLAEPDMLKEGWFSAGIISPYQAQVKHLKELFAEHPDLTEVAPWTDIN 567
Query: 679 TVDGCQGREKDVAIFSCVRASDKKSIGFLADYRRMNVGITRAKSSILVVGCASTLREDKH 738
++DG QG+E+DV S VR++DK IGFL D RRMNV +TRA+ ++V+G + TL ++
Sbjct: 568 SIDGFQGQERDVVYISMVRSNDKGKIGFLEDTRRMNVALTRARKKLVVIGDSGTLGQNAF 627
Query: 739 WNNLV 743
+ + +
Sbjct: 628 YQHFL 632
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.134 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,075,973,823
Number of Sequences: 23463169
Number of extensions: 573362668
Number of successful extensions: 1644441
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2934
Number of HSP's successfully gapped in prelim test: 3407
Number of HSP's that attempted gapping in prelim test: 1618248
Number of HSP's gapped (non-prelim): 17049
length of query: 824
length of database: 8,064,228,071
effective HSP length: 151
effective length of query: 673
effective length of database: 8,816,256,848
effective search space: 5933340858704
effective search space used: 5933340858704
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 81 (35.8 bits)