BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003395
(823 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6BDS2|URFB1_HUMAN UHRF1-binding protein 1 OS=Homo sapiens GN=UHRF1BP1 PE=1 SV=1
Length = 1440
Score = 64.3 bits (155), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 96/208 (46%), Gaps = 19/208 (9%)
Query: 1 MESIIARALEYTFKYWLKSFSRDQFKLQ--GRTAQLSNLDINGDALHASMGLPPALHVTT 58
M II + + + K+ S D+ L QL+NL+++ + L + LP L +T
Sbjct: 1 MAGIIKKQILKHLSRFTKNLSPDKINLSTLKGEGQLTNLELDEEVLQNVLELPTWLAITR 60
Query: 59 AKLGKLEIILPSSVSNVQIEPIVLQVDRLDLVLEENPDKDACNYASSTPTPTGSSKGSGY 118
+ I + + ++ PI L +D++++ ++ D N S +G S+ Y
Sbjct: 61 VYCNRASIRI--QWTKLKTHPICLCLDKVEVEMKTCEDPRPPNGQSPIALASGQSE---Y 115
Query: 119 GFADKIADGMTLQVNTVNLLLVTRGGAQRDGGASWTPPMASITIRNLVLCTTNENWQVVN 178
GFA+K+ +GM + VN++ + + ++ AS + L + N NWQ +
Sbjct: 116 GFAEKVVEGMFIIVNSITIKIHSKAF------------HASFELWQLQGYSVNPNWQQSD 163
Query: 179 LKEARDFSLNKKFIYVFKKLEWETLSVD 206
L+ R + + FK++ W+TL ++
Sbjct: 164 LRLTRITDPCRGEVLTFKEITWQTLRIE 191
>sp|Q6NRZ1|UH1BL_XENLA UHRF1-binding protein 1-like OS=Xenopus laevis GN=uhrf1bp1l PE=2
SV=1
Length = 1415
Score = 64.3 bits (155), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 98/208 (47%), Gaps = 19/208 (9%)
Query: 1 MESIIARALEYTFKYWLKSFSRDQFKLQ--GRTAQLSNLDINGDALHASMGLPPALHVTT 58
M +I + + + K+ S D+ L QL+NL+++ + L + LP L +
Sbjct: 1 MAGLIKKQILKHLSRFTKNLSPDKINLSTLKGEGQLTNLELDEEVLQNMLDLPTWLAINK 60
Query: 59 AKLGKLEIILPSSVSNVQIEPIVLQVDRLDLVLEENPDKDACNYASSTPTPTGSSKGSGY 118
K I +P + ++ PI L +D++ + + + +CN S T +G S+ Y
Sbjct: 61 VFCNKAAIRIP--WTKLKTHPISLSLDKVIMEMSTCEEPRSCNGPSPLVTASGQSE---Y 115
Query: 119 GFADKIADGMTLQVNTVNLLLVTRGGAQRDGGASWTPPMASITIRNLVLCTTNENWQVVN 178
GFA+K+ +G++L VN++ ++ R A AS + L + + N +WQ +
Sbjct: 116 GFAEKVVEGISLSVNSI--IIRIRAKAFN----------ASFELSQLRIYSVNPSWQHGD 163
Query: 179 LKEARDFSLNKKFIYVFKKLEWETLSVD 206
L+ R + + FK++ W+ + ++
Sbjct: 164 LRFTRIQDPQRGEVLTFKEINWQMIRIE 191
>sp|A2RSJ4|UH1BL_MOUSE UHRF1-binding protein 1-like OS=Mus musculus GN=Uhrf1bp1l PE=2 SV=2
Length = 1457
Score = 63.9 bits (154), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 98/208 (47%), Gaps = 19/208 (9%)
Query: 1 MESIIARALEYTFKYWLKSFSRDQFKLQ--GRTAQLSNLDINGDALHASMGLPPALHVTT 58
M II + + + K+ S D+ L +L NL+++ + L + LP L ++
Sbjct: 1 MAGIIKKQILKHLSRFTKNLSPDKINLSTLKGEGELKNLELDEEVLQNMLDLPTWLAISK 60
Query: 59 AKLGKLEIILPSSVSNVQIEPIVLQVDRLDLVLEENPDKDACNYASSTPTPTGSSKGSGY 118
K I +P + ++ +PI L +D++ + + + A N S T +G S+ Y
Sbjct: 61 VFCNKASIRIP--WTKLKTQPICLSLDKVIMEMSTCEEPRAPNGPSPIATASGQSE---Y 115
Query: 119 GFADKIADGMTLQVNTVNLLLVTRGGAQRDGGASWTPPMASITIRNLVLCTTNENWQVVN 178
GFA+K+ +G+T+ VN++ V R GA+ AS + L + + N W+ +
Sbjct: 116 GFAEKVVEGITVSVNSI----VIRIGAKAFN--------ASFELSQLRIYSVNAQWEHGD 163
Query: 179 LKEARDFSLNKKFIYVFKKLEWETLSVD 206
L+ R + + FK++ W+ + ++
Sbjct: 164 LRFTRIQDPQRGEVLTFKEINWQMIRIE 191
>sp|A0JNW5|UH1BL_HUMAN UHRF1-binding protein 1-like OS=Homo sapiens GN=UHRF1BP1L PE=1 SV=2
Length = 1464
Score = 59.7 bits (143), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 98/209 (46%), Gaps = 21/209 (10%)
Query: 1 MESIIARALEYTFKYWLKSFSRDQFKLQ--GRTAQLSNLDINGDALHASMGLPPALHVTT 58
M II + + + K+ S D+ L +L NL+++ + L + LP L +
Sbjct: 1 MAGIIKKQILKHLSRFTKNLSPDKINLSTLKGEGELKNLELDEEVLQNMLDLPTWLAINK 60
Query: 59 AKLGKLEIILPSSVSNVQIEPIVLQVDRLDLVLEENPDKDACNYASSTPTPTGSSKG-SG 117
K I +P + ++ PI L +D++ + + + + N P+P ++ G S
Sbjct: 61 VFCNKASIRIP--WTKLKTHPICLSLDKVIMEMSTCEEPRSPN----GPSPIATASGQSE 114
Query: 118 YGFADKIADGMTLQVNTVNLLLVTRGGAQRDGGASWTPPMASITIRNLVLCTTNENWQVV 177
YGFA+K+ +G+++ VN++ V R GA+ AS + L + + N +W+
Sbjct: 115 YGFAEKVVEGISVSVNSI----VIRIGAKAFN--------ASFELSQLRIYSVNAHWEHG 162
Query: 178 NLKEARDFSLNKKFIYVFKKLEWETLSVD 206
+L+ R + + FK++ W+ + ++
Sbjct: 163 DLRFTRIQDPQRGEVLTFKEINWQMIRIE 191
>sp|A9IXE5|DAPB_BART1 4-hydroxy-tetrahydrodipicolinate reductase OS=Bartonella tribocorum
(strain CIP 105476 / IBS 506) GN=dapB PE=3 SV=1
Length = 270
Score = 33.9 bits (76), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 32/76 (42%)
Query: 639 YLSNTSVEQLFFVLDIYTYFGRVSEKIVRVGKNKSAMKSGNESLGVKLMENAPNDTAVSL 698
Y + ++L ++ + EKI K + +KSGN SLG+ L+ N A +L
Sbjct: 83 YADYAAQKKLVHIIGTTGFSKTEEEKIAEFAKYTTIVKSGNMSLGINLLANLVKKAAKAL 142
Query: 699 AVKDLQLRFLEPSSMN 714
D + E N
Sbjct: 143 EADDFDIEIYEMHHAN 158
>sp|Q6FZ13|DAPB_BARQU 4-hydroxy-tetrahydrodipicolinate reductase OS=Bartonella quintana
(strain Toulouse) GN=dapB PE=3 SV=1
Length = 270
Score = 33.5 bits (75), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 33/71 (46%)
Query: 639 YLSNTSVEQLFFVLDIYTYFGRVSEKIVRVGKNKSAMKSGNESLGVKLMENAPNDTAVSL 698
Y + + + L ++ + EKI K+ + +KSGN SLGV L+ + A +L
Sbjct: 83 YANYAAQKSLVHIIGTTGFSKTEEEKIADFAKDTTIVKSGNMSLGVNLLASLVKKAAKAL 142
Query: 699 AVKDLQLRFLE 709
V D + E
Sbjct: 143 EVDDFDIEIYE 153
>sp|O15040|TCPR2_HUMAN Tectonin beta-propeller repeat-containing protein 2 OS=Homo sapiens
GN=TECPR2 PE=1 SV=4
Length = 1411
Score = 33.1 bits (74), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Query: 594 NSGLWKCVELKDACIEVAMVSADGKPLTVVPPPGGVVRIGVACQQYL 640
S LW C KD C V+ SA +P TV PP +R ACQ L
Sbjct: 1136 GSFLWLCQSSKDLC-SVSAQSAQSRPSTVQLPPEAEMRAYAACQDAL 1181
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.134 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 302,583,354
Number of Sequences: 539616
Number of extensions: 12804164
Number of successful extensions: 27518
Number of sequences better than 100.0: 13
Number of HSP's better than 100.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 27501
Number of HSP's gapped (non-prelim): 21
length of query: 823
length of database: 191,569,459
effective HSP length: 126
effective length of query: 697
effective length of database: 123,577,843
effective search space: 86133756571
effective search space used: 86133756571
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 66 (30.0 bits)