BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003402
(823 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 103/294 (35%), Positives = 153/294 (52%), Gaps = 31/294 (10%)
Query: 512 LPLFSFASVTAATENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLK-EFKN 570
L FS + A++NFS ++ LG GGFG VYKGRL +G VAVKRL + QG + +F+
Sbjct: 25 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQT 84
Query: 571 EMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFD-PTKKHLLGWQLRVRI 629
E+ +I+ HRNL+RL G C+ E++L+Y YM N S+ L + P + L W R RI
Sbjct: 85 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRI 144
Query: 630 IDGIAQ-----DQHMNPKI--------------------SDFGMARMFGGDELQGNTKRI 664
G A+ H +PKI DFG+A++ + +
Sbjct: 145 ALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXA-V 203
Query: 665 VGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKN---TGVYNTDSFNLLGHAWSL 721
GT G+++PEY G S K+DVF +GV++LE+++ ++ + N D LL L
Sbjct: 204 RGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGL 263
Query: 722 CKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775
K + L+D LQ + + I VALLC Q + +RP MS+VV M+ +
Sbjct: 264 LKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 317
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 101/294 (34%), Positives = 151/294 (51%), Gaps = 31/294 (10%)
Query: 512 LPLFSFASVTAATENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLK-EFKN 570
L FS + A++NF ++ LG GGFG VYKGRL +G VAVKRL + QG + +F+
Sbjct: 17 LKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQT 76
Query: 571 EMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFD-PTKKHLLGWQLRVRI 629
E+ +I+ HRNL+RL G C+ E++L+Y YM N S+ L + P + L W R RI
Sbjct: 77 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRI 136
Query: 630 IDGIAQ-----DQHMNPKI--------------------SDFGMARMFGGDELQGNTKRI 664
G A+ H +PKI DFG+A++ + +
Sbjct: 137 ALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXA-V 195
Query: 665 VGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKN---TGVYNTDSFNLLGHAWSL 721
G G+++PEY G S K+DVF +GV++LE+++ ++ + N D LL L
Sbjct: 196 RGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGL 255
Query: 722 CKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775
K + L+D LQ + + I VALLC Q + +RP MS+VV M+ +
Sbjct: 256 LKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 309
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 135 bits (340), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 95/281 (33%), Positives = 155/281 (55%), Gaps = 32/281 (11%)
Query: 517 FASVTAATENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIA 576
+ AT NF + +G G FG VYKG L +G +VA+KR + +S QG++EF+ E+ ++
Sbjct: 31 LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLS 90
Query: 577 KLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFD---PTKKHLLGWQLRVRIIDGI 633
+H +LV L+G C E+ E ILIY+YM N +L L+ PT + W+ R+ I G
Sbjct: 91 FCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMS--MSWEQRLEICIGA 148
Query: 634 AQ----------------------DQHMNPKISDFGMARMFGGDEL-QGNTKRIV-GTYG 669
A+ D++ PKI+DFG+++ G EL Q + +V GT G
Sbjct: 149 ARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISK--KGTELDQTHLXXVVKGTLG 206
Query: 670 YMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKN-TGVYNTDSFNLLGHAWSLCKNDRAH 728
Y+ PEY ++G + KSDV+SFGV++ E+L ++ + NL A N +
Sbjct: 207 YIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLE 266
Query: 729 ELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVV 769
+++DP L +++ L ++ + A+ C+ ++EDRP+M DV+
Sbjct: 267 QIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 135 bits (340), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 95/281 (33%), Positives = 155/281 (55%), Gaps = 32/281 (11%)
Query: 517 FASVTAATENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIA 576
+ AT NF + +G G FG VYKG L +G +VA+KR + +S QG++EF+ E+ ++
Sbjct: 31 LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLS 90
Query: 577 KLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFD---PTKKHLLGWQLRVRIIDGI 633
+H +LV L+G C E+ E ILIY+YM N +L L+ PT + W+ R+ I G
Sbjct: 91 FCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMS--MSWEQRLEICIGA 148
Query: 634 AQ----------------------DQHMNPKISDFGMARMFGGDEL-QGNTKRIV-GTYG 669
A+ D++ PKI+DFG+++ G EL Q + +V GT G
Sbjct: 149 ARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKK--GTELGQTHLXXVVKGTLG 206
Query: 670 YMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKN-TGVYNTDSFNLLGHAWSLCKNDRAH 728
Y+ PEY ++G + KSDV+SFGV++ E+L ++ + NL A N +
Sbjct: 207 YIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLE 266
Query: 729 ELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVV 769
+++DP L +++ L ++ + A+ C+ ++EDRP+M DV+
Sbjct: 267 QIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 94/292 (32%), Positives = 136/292 (46%), Gaps = 39/292 (13%)
Query: 515 FSFASVTAATENFSIQ------SKLGEGGFGPVYKGRLLNGQEVAVKRLS---NQSGQGL 565
FSF + T NF + +K+GEGGFG VYKG +N VAVK+L+ + + + L
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEEL 73
Query: 566 KE-FKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSL--DVFLFDPTKKHLLG 622
K+ F E+ ++AK QH NLV LLG + + L+Y YM N SL + D T L
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPP--LS 131
Query: 623 WQLRVRIIDGIAQ----------------------DQHMNPKISDFGMARMFGGDELQGN 660
W +R +I G A D+ KISDFG+AR
Sbjct: 132 WHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVM 191
Query: 661 TKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWS 720
RIVGT YM+PE AL G + KSD++SFGV++LEI++ + L
Sbjct: 192 XSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEI 250
Query: 721 LCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMI 772
+ + +D + + S + Y +VA C+ E RP + V ++
Sbjct: 251 EDEEKTIEDYIDKKMNDADSTSVEAMY-SVASQCLHEKKNKRPDIKKVQQLL 301
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 94/292 (32%), Positives = 136/292 (46%), Gaps = 39/292 (13%)
Query: 515 FSFASVTAATENFSIQ------SKLGEGGFGPVYKGRLLNGQEVAVKRLS---NQSGQGL 565
FSF + T NF + +K+GEGGFG VYKG +N VAVK+L+ + + + L
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEEL 73
Query: 566 KE-FKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSL--DVFLFDPTKKHLLG 622
K+ F E+ ++AK QH NLV LLG + + L+Y YM N SL + D T L
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPP--LS 131
Query: 623 WQLRVRIIDGIAQ----------------------DQHMNPKISDFGMARMFGGDELQGN 660
W +R +I G A D+ KISDFG+AR
Sbjct: 132 WHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVM 191
Query: 661 TKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWS 720
RIVGT YM+PE AL G + KSD++SFGV++LEI++ + L
Sbjct: 192 XXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEI 250
Query: 721 LCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMI 772
+ + +D + + S + Y +VA C+ E RP + V ++
Sbjct: 251 EDEEKTIEDYIDKKMNDADSTSVEAMY-SVASQCLHEKKNKRPDIKKVQQLL 301
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 94/292 (32%), Positives = 136/292 (46%), Gaps = 39/292 (13%)
Query: 515 FSFASVTAATENFSIQ------SKLGEGGFGPVYKGRLLNGQEVAVKRLS---NQSGQGL 565
FSF + T NF + +K+GEGGFG VYKG +N VAVK+L+ + + + L
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEEL 67
Query: 566 KE-FKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSL--DVFLFDPTKKHLLG 622
K+ F E+ ++AK QH NLV LLG + + L+Y YM N SL + D T L
Sbjct: 68 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPP--LS 125
Query: 623 WQLRVRIIDGIAQ----------------------DQHMNPKISDFGMARMFGGDELQGN 660
W +R +I G A D+ KISDFG+AR
Sbjct: 126 WHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVM 185
Query: 661 TKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWS 720
RIVGT YM+PE AL G + KSD++SFGV++LEI++ + L
Sbjct: 186 XXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEI 244
Query: 721 LCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMI 772
+ + +D + + S + Y +VA C+ E RP + V ++
Sbjct: 245 EDEEKTIEDYIDKKMNDADSTSVEAMY-SVASQCLHEKKNKRPDIKKVQQLL 295
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 92/292 (31%), Positives = 130/292 (44%), Gaps = 39/292 (13%)
Query: 515 FSFASVTAATENFSIQ------SKLGEGGFGPVYKGRLLNGQEVAVKRLS---NQSGQGL 565
FSF + T NF + +K GEGGFG VYKG +N VAVK+L+ + + + L
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEEL 64
Query: 566 KE-FKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSL--DVFLFDPTKKHLLG 622
K+ F E+ + AK QH NLV LLG + + L+Y Y N SL + D T L
Sbjct: 65 KQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPP--LS 122
Query: 623 WQLRVRIIDGIAQ----------------------DQHMNPKISDFGMARMFGGDELQGN 660
W R +I G A D+ KISDFG+AR
Sbjct: 123 WHXRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVX 182
Query: 661 TKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWS 720
RIVGT Y +PE AL G + KSD++SFGV++LEI++ + L
Sbjct: 183 XSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEI 241
Query: 721 LCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMI 772
+ + +D + S + Y +VA C+ E RP + V ++
Sbjct: 242 EDEEKTIEDYIDKKXNDADSTSVEAXY-SVASQCLHEKKNKRPDIKKVQQLL 292
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 123/277 (44%), Gaps = 50/277 (18%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
E + +LG G FG V+ G +VAVK L Q F E L+ +LQH+ LV
Sbjct: 21 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLV 79
Query: 585 RLLGCCIEQGEKILIYEYMVNKSLDVFLFDP-----TKKHLLGWQLRVRIIDGIAQDQHM 639
RL + Q +I EYM N SL FL P T LL + +I +G+A +
Sbjct: 80 RLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLL--DMAAQIAEGMAFIEER 136
Query: 640 NP------------------KISDFGMARMFGGDELQGNTKRIVGTY--GYMSPEYALEG 679
N KI+DFG+AR+ +E T R + + +PE G
Sbjct: 137 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE---XTAREGAKFPIKWTAPEAINYG 193
Query: 680 VFSVKSDVFSFGVLMLEILSSKK--NTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQN 737
F++KSDV+SFG+L+ EI++ + G+ N + L + + + D E
Sbjct: 194 TFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPE-------- 245
Query: 738 EVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774
L L+R LC +E EDRPT + S++ +
Sbjct: 246 --ELYQLMR------LCWKERPEDRPTFDYLRSVLED 274
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 123/277 (44%), Gaps = 50/277 (18%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
E + +LG G FG V+ G +VAVK L Q F E L+ +LQH+ LV
Sbjct: 13 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLV 71
Query: 585 RLLGCCIEQGEKILIYEYMVNKSLDVFLFDP-----TKKHLLGWQLRVRIIDGIAQDQHM 639
RL + Q +I EYM N SL FL P T LL + +I +G+A +
Sbjct: 72 RLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLL--DMAAQIAEGMAFIEER 128
Query: 640 NP------------------KISDFGMARMFGGDELQGNTKRIVGTY--GYMSPEYALEG 679
N KI+DFG+AR+ +E T R + + +PE G
Sbjct: 129 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE---XTAREGAKFPIKWTAPEAINYG 185
Query: 680 VFSVKSDVFSFGVLMLEILSSKK--NTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQN 737
F++KSDV+SFG+L+ EI++ + G+ N + L + + + D E
Sbjct: 186 TFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPE-------- 237
Query: 738 EVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774
L L+R LC +E EDRPT + S++ +
Sbjct: 238 --ELYQLMR------LCWKERPEDRPTFDYLRSVLED 266
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 123/277 (44%), Gaps = 50/277 (18%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
E + +LG G FG V+ G +VAVK L Q F E L+ +LQH+ LV
Sbjct: 22 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLV 80
Query: 585 RLLGCCIEQGEKILIYEYMVNKSLDVFLFDP-----TKKHLLGWQLRVRIIDGIAQDQHM 639
RL + Q +I EYM N SL FL P T LL + +I +G+A +
Sbjct: 81 RLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLL--DMAAQIAEGMAFIEER 137
Query: 640 NP------------------KISDFGMARMFGGDELQGNTKRIVGTY--GYMSPEYALEG 679
N KI+DFG+AR+ +E T R + + +PE G
Sbjct: 138 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE---XTAREGAKFPIKWTAPEAINYG 194
Query: 680 VFSVKSDVFSFGVLMLEILSSKK--NTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQN 737
F++KSDV+SFG+L+ EI++ + G+ N + L + + + D E
Sbjct: 195 TFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPE-------- 246
Query: 738 EVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774
L L+R LC +E EDRPT + S++ +
Sbjct: 247 --ELYQLMR------LCWKERPEDRPTFDYLRSVLED 275
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 123/277 (44%), Gaps = 50/277 (18%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
E + +LG G FG V+ G +VAVK L Q F E L+ +LQH+ LV
Sbjct: 19 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLV 77
Query: 585 RLLGCCIEQGEKILIYEYMVNKSLDVFLFDP-----TKKHLLGWQLRVRIIDGIAQDQHM 639
RL + Q +I EYM N SL FL P T LL + +I +G+A +
Sbjct: 78 RLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLL--DMAAQIAEGMAFIEER 134
Query: 640 NP------------------KISDFGMARMFGGDELQGNTKRIVGTY--GYMSPEYALEG 679
N KI+DFG+AR+ +E T R + + +PE G
Sbjct: 135 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE---XTAREGAKFPIKWTAPEAINYG 191
Query: 680 VFSVKSDVFSFGVLMLEILSSKK--NTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQN 737
F++KSDV+SFG+L+ EI++ + G+ N + L + + + D E
Sbjct: 192 TFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPE-------- 243
Query: 738 EVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774
L L+R LC +E EDRPT + S++ +
Sbjct: 244 --ELYQLMR------LCWKERPEDRPTFDYLRSVLED 272
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 123/277 (44%), Gaps = 50/277 (18%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
E + +LG G FG V+ G +VAVK L Q F E L+ +LQH+ LV
Sbjct: 19 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLV 77
Query: 585 RLLGCCIEQGEKILIYEYMVNKSLDVFLFDP-----TKKHLLGWQLRVRIIDGIAQDQHM 639
RL + Q +I EYM N SL FL P T LL + +I +G+A +
Sbjct: 78 RLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLL--DMAAQIAEGMAFIEER 134
Query: 640 NP------------------KISDFGMARMFGGDELQGNTKRIVGTY--GYMSPEYALEG 679
N KI+DFG+AR+ +E T R + + +PE G
Sbjct: 135 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY---TAREGAKFPIKWTAPEAINYG 191
Query: 680 VFSVKSDVFSFGVLMLEILSSKK--NTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQN 737
F++KSDV+SFG+L+ EI++ + G+ N + L + + + D E
Sbjct: 192 TFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPE-------- 243
Query: 738 EVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774
L L+R LC +E EDRPT + S++ +
Sbjct: 244 --ELYQLMR------LCWKERPEDRPTFDYLRSVLED 272
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 123/277 (44%), Gaps = 50/277 (18%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
E + +LG G FG V+ G +VAVK L Q F E L+ +LQH+ LV
Sbjct: 13 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLV 71
Query: 585 RLLGCCIEQGEKILIYEYMVNKSLDVFLFDP-----TKKHLLGWQLRVRIIDGIAQDQHM 639
RL + Q +I EYM N SL FL P T LL + +I +G+A +
Sbjct: 72 RLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLL--DMAAQIAEGMAFIEER 128
Query: 640 NP------------------KISDFGMARMFGGDELQGNTKRIVGTY--GYMSPEYALEG 679
N KI+DFG+AR+ +E T R + + +PE G
Sbjct: 129 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE---XTAREGAKFPIKWTAPEAINYG 185
Query: 680 VFSVKSDVFSFGVLMLEILSSKK--NTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQN 737
F++KSDV+SFG+L+ EI++ + G+ N + L + + + D E
Sbjct: 186 TFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPE-------- 237
Query: 738 EVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774
L L+R LC +E EDRPT + S++ +
Sbjct: 238 --ELYQLMR------LCWKERPEDRPTFDYLRSVLED 266
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 123/277 (44%), Gaps = 50/277 (18%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
E + +LG G FG V+ G +VAVK L Q F E L+ +LQH+ LV
Sbjct: 23 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLV 81
Query: 585 RLLGCCIEQGEKILIYEYMVNKSLDVFLFDP-----TKKHLLGWQLRVRIIDGIAQDQHM 639
RL + Q +I EYM N SL FL P T LL + +I +G+A +
Sbjct: 82 RLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLL--DMAAQIAEGMAFIEER 138
Query: 640 NP------------------KISDFGMARMFGGDELQGNTKRIVGTY--GYMSPEYALEG 679
N KI+DFG+AR+ +E T R + + +PE G
Sbjct: 139 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY---TAREGAKFPIKWTAPEAINYG 195
Query: 680 VFSVKSDVFSFGVLMLEILSSKK--NTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQN 737
F++KSDV+SFG+L+ EI++ + G+ N + L + + + D E
Sbjct: 196 TFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPE-------- 247
Query: 738 EVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774
L L+R LC +E EDRPT + S++ +
Sbjct: 248 --ELYQLMR------LCWKERPEDRPTFDYLRSVLED 276
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 123/277 (44%), Gaps = 50/277 (18%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
E + +LG G FG V+ G +VAVK L Q F E L+ +LQH+ LV
Sbjct: 15 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLV 73
Query: 585 RLLGCCIEQGEKILIYEYMVNKSLDVFLFDP-----TKKHLLGWQLRVRIIDGIAQDQHM 639
RL + Q +I EYM N SL FL P T LL + +I +G+A +
Sbjct: 74 RLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLL--DMAAQIAEGMAFIEER 130
Query: 640 NP------------------KISDFGMARMFGGDELQGNTKRIVGTY--GYMSPEYALEG 679
N KI+DFG+AR+ +E T R + + +PE G
Sbjct: 131 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE---XTAREGAKFPIKWTAPEAINYG 187
Query: 680 VFSVKSDVFSFGVLMLEILSSKK--NTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQN 737
F++KSDV+SFG+L+ EI++ + G+ N + L + + + D E
Sbjct: 188 TFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPE-------- 239
Query: 738 EVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774
L L+R LC +E EDRPT + S++ +
Sbjct: 240 --ELYQLMR------LCWKERPEDRPTFDYLRSVLED 268
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 123/277 (44%), Gaps = 50/277 (18%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
E + +LG G FG V+ G +VAVK L Q F E L+ +LQH+ LV
Sbjct: 18 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLV 76
Query: 585 RLLGCCIEQGEKILIYEYMVNKSLDVFLFDP-----TKKHLLGWQLRVRIIDGIAQDQHM 639
RL + Q +I EYM N SL FL P T LL + +I +G+A +
Sbjct: 77 RLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLL--DMAAQIAEGMAFIEER 133
Query: 640 NP------------------KISDFGMARMFGGDELQGNTKRIVGTY--GYMSPEYALEG 679
N KI+DFG+AR+ +E T R + + +PE G
Sbjct: 134 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY---TAREGAKFPIKWTAPEAINYG 190
Query: 680 VFSVKSDVFSFGVLMLEILSSKK--NTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQN 737
F++KSDV+SFG+L+ EI++ + G+ N + L + + + D E
Sbjct: 191 TFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPE-------- 242
Query: 738 EVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774
L L+R LC +E EDRPT + S++ +
Sbjct: 243 --ELYQLMR------LCWKERPEDRPTFDYLRSVLED 271
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 123/277 (44%), Gaps = 50/277 (18%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
E + +LG G FG V+ G +VAVK L Q F E L+ +LQH+ LV
Sbjct: 14 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLV 72
Query: 585 RLLGCCIEQGEKILIYEYMVNKSLDVFLFDP-----TKKHLLGWQLRVRIIDGIAQDQHM 639
RL + Q +I EYM N SL FL P T LL + +I +G+A +
Sbjct: 73 RLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLL--DMAAQIAEGMAFIEER 129
Query: 640 NP------------------KISDFGMARMFGGDELQGNTKRIVGTY--GYMSPEYALEG 679
N KI+DFG+AR+ +E T R + + +PE G
Sbjct: 130 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE---XTAREGAKFPIKWTAPEAINYG 186
Query: 680 VFSVKSDVFSFGVLMLEILSSKK--NTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQN 737
F++KSDV+SFG+L+ EI++ + G+ N + L + + + D E
Sbjct: 187 TFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPE-------- 238
Query: 738 EVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774
L L+R LC +E EDRPT + S++ +
Sbjct: 239 --ELYQLMR------LCWKERPEDRPTFDYLRSVLED 267
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 123/277 (44%), Gaps = 50/277 (18%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
E + +LG G FG V+ G +VAVK L Q F E L+ +LQH+ LV
Sbjct: 13 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLV 71
Query: 585 RLLGCCIEQGEKILIYEYMVNKSLDVFLFDP-----TKKHLLGWQLRVRIIDGIAQDQHM 639
RL + Q +I EYM N SL FL P T LL + +I +G+A +
Sbjct: 72 RLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLL--DMAAQIAEGMAFIEER 128
Query: 640 NP------------------KISDFGMARMFGGDELQGNTKRIVGTY--GYMSPEYALEG 679
N KI+DFG+AR+ +E T R + + +PE G
Sbjct: 129 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY---TAREGAKFPIKWTAPEAINYG 185
Query: 680 VFSVKSDVFSFGVLMLEILSSKK--NTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQN 737
F++KSDV+SFG+L+ EI++ + G+ N + L + + + D E
Sbjct: 186 TFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPE-------- 237
Query: 738 EVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774
L L+R LC +E EDRPT + S++ +
Sbjct: 238 --ELYQLMR------LCWKERPEDRPTFDYLRSVLED 266
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 123/275 (44%), Gaps = 46/275 (16%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
E + +LG G FG V+ G +VAVK L Q F E L+ +LQH+ LV
Sbjct: 9 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLV 67
Query: 585 RLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQL---RVRIIDGIAQDQHMNP 641
RL + Q +I EYM N SL FL P+ L +L +I +G+A + N
Sbjct: 68 RLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 126
Query: 642 ------------------KISDFGMARMFGGDELQGNTKRIVGTY--GYMSPEYALEGVF 681
KI+DFG+AR+ +E T R + + +PE G F
Sbjct: 127 IHRNLRAANILVSDTLSCKIADFGLARLIEDNEY---TAREGAKFPIKWTAPEAINYGTF 183
Query: 682 SVKSDVFSFGVLMLEILSSKK--NTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEV 739
++KSDV+SFG+L+ EI++ + G+ N + L + + + D E
Sbjct: 184 TIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPE---------- 233
Query: 740 SLPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774
L L+R LC +E EDRPT + S++ +
Sbjct: 234 ELYQLMR------LCWKERPEDRPTFDYLRSVLED 262
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 123/275 (44%), Gaps = 46/275 (16%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
E + +LG G FG V+ G +VAVK L Q F E L+ +LQH+ LV
Sbjct: 8 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLV 66
Query: 585 RLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQL---RVRIIDGIAQDQHMNP 641
RL + Q +I EYM N SL FL P+ L +L +I +G+A + N
Sbjct: 67 RLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 125
Query: 642 ------------------KISDFGMARMFGGDELQGNTKRIVGTY--GYMSPEYALEGVF 681
KI+DFG+AR+ +E T R + + +PE G F
Sbjct: 126 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEY---TAREGAKFPIKWTAPEAINYGTF 182
Query: 682 SVKSDVFSFGVLMLEILSSKK--NTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEV 739
++KSDV+SFG+L+ EI++ + G+ N + L + + + D E
Sbjct: 183 TIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPE---------- 232
Query: 740 SLPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774
L L+R LC +E EDRPT + S++ +
Sbjct: 233 ELYQLMR------LCWKERPEDRPTFDYLRSVLED 261
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 122/276 (44%), Gaps = 47/276 (17%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
E+ + +LG G FG V+ G N +VAVK L + ++ F E L+ LQH LV
Sbjct: 13 ESIKLVKRLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLV 71
Query: 585 RLLGCCIEQGEKILIYEYMVNKSLDVFL-FDPTKKHLLG--WQLRVRIIDGIAQDQHMNP 641
RL + +I EYM SL FL D K LL +I +G+A + N
Sbjct: 72 RLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNY 131
Query: 642 ------------------KISDFGMARMFGGDELQGNTKRIVGTY--GYMSPEYALEGVF 681
KI+DFG+AR+ +E T R + + +PE G F
Sbjct: 132 IHRDLRAANVLVSESLMCKIADFGLARVIEDNEY---TAREGAKFPIKWTAPEAINFGCF 188
Query: 682 SVKSDVFSFGVLMLEILSSKK--NTGVYNTDSFNLLGHAWSLCKNDR-AHELMDPVLQNE 738
++KSDV+SFG+L+ EI++ K G N D L + + + + EL D
Sbjct: 189 TIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQGYRMPRVENCPDELYD------ 242
Query: 739 VSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774
+ +C +E AE+RPT + S++++
Sbjct: 243 -----------IMKMCWKEKAEERPTFDYLQSVLDD 267
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 121/277 (43%), Gaps = 50/277 (18%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
E + +LG G G V+ G +VAVK L Q F E L+ +LQH+ LV
Sbjct: 13 ETLKLVERLGAGQAGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLV 71
Query: 585 RLLGCCIEQGEKILIYEYMVNKSLDVFLFDP-----TKKHLLGWQLRVRIIDGIAQDQHM 639
RL + Q +I EYM N SL FL P T LL + +I +G+A +
Sbjct: 72 RLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLL--DMAAQIAEGMAFIEER 128
Query: 640 NP------------------KISDFGMARMFGGDELQGNTKRIVGTY--GYMSPEYALEG 679
N KI+DFG+AR+ E T R + + +PE G
Sbjct: 129 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDAE---XTAREGAKFPIKWTAPEAINYG 185
Query: 680 VFSVKSDVFSFGVLMLEILSSKK--NTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQN 737
F++KSDV+SFG+L+ EI++ + G+ N + L + + + D E
Sbjct: 186 TFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPE-------- 237
Query: 738 EVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774
L L+R LC +E EDRPT + S++ +
Sbjct: 238 --ELYQLMR------LCWKERPEDRPTFDYLRSVLED 266
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 125/275 (45%), Gaps = 45/275 (16%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
E+ + KLG G FG V+ G N +VAVK L + ++ F E L+ LQH LV
Sbjct: 12 ESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLV 70
Query: 585 RLLGCCIEQGEKILIYEYMVNKSLDVFL-FDPTKKHLLG--WQLRVRIIDGIAQDQHMNP 641
RL ++ +I E+M SL FL D K LL +I +G+A + N
Sbjct: 71 RLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNY 130
Query: 642 ------------------KISDFGMARMFGGDELQGNTKRIVGTY--GYMSPEYALEGVF 681
KI+DFG+AR+ +E T R + + +PE G F
Sbjct: 131 IHRDLRAANVLVSESLMCKIADFGLARVIEDNEY---TAREGAKFPIKWTAPEAINFGCF 187
Query: 682 SVKSDVFSFGVLMLEILSSKK--NTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEV 739
++KS+V+SFG+L+ EI++ K G N D + L + + + + + + +++
Sbjct: 188 TIKSNVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQGYRMPRMENCPDELYDIMK--- 244
Query: 740 SLPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774
+C +E AE+RPT + S++++
Sbjct: 245 -------------MCWKEKAEERPTFDYLQSVLDD 266
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 128/288 (44%), Gaps = 49/288 (17%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
E+ ++ KLG+G FG V+ G VA+K L + + F E ++ KL+H LV
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLV 242
Query: 585 RLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQL---RVRIIDGIAQDQHMNP 641
+L E+ I + EYM SL FL T K+L QL +I G+A + MN
Sbjct: 243 QLYAVVSEEPIYI-VTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY 301
Query: 642 ------------------KISDFGMARMFGGDELQGNTKRIVGTY--GYMSPEYALEGVF 681
K++DFG+AR+ +E T R + + +PE AL G F
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLIEDNEY---TARQGAKFPIKWTAPEAALYGRF 358
Query: 682 SVKSDVFSFGVLMLEILSSKK--NTGVYNTDSFNLLGHAWSL-CKNDRAHELMDPVLQNE 738
++KSDV+SFG+L+ E+ + + G+ N + + + + + C + L D + Q
Sbjct: 359 TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQ-- 416
Query: 739 VSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFNLPSPKEPP 786
C ++ E+RPT + + + + F P+ P
Sbjct: 417 ---------------CWRKEPEERPTFEYLQAFLED-YFTSTEPQXQP 448
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 128/289 (44%), Gaps = 51/289 (17%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
E+ ++ KLG+G FG V+ G VA+K L + + F E ++ KL+H LV
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLV 242
Query: 585 RLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQL---RVRIIDGIAQDQHMNP 641
+L E+ I + EYM SL FL T K+L QL +I G+A + MN
Sbjct: 243 QLYAVVSEEPIYI-VTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY 301
Query: 642 ------------------KISDFGMARMFGGDEL---QGNTKRIVGTYGYMSPEYALEGV 680
K++DFG+AR+ +E QG I T +PE AL G
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT----APEAALYGR 357
Query: 681 FSVKSDVFSFGVLMLEILSSKK--NTGVYNTDSFNLLGHAWSL-CKNDRAHELMDPVLQN 737
F++KSDV+SFG+L+ E+ + + G+ N + + + + + C + L D + Q
Sbjct: 358 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQ- 416
Query: 738 EVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFNLPSPKEPP 786
C ++ E+RPT + + + + F P+ P
Sbjct: 417 ----------------CWRKEPEERPTFEYLQAFLED-YFTSTEPQYQP 448
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 128/288 (44%), Gaps = 49/288 (17%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
E+ ++ KLG+G FG V+ G VA+K L + + F E ++ KL+H LV
Sbjct: 267 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLV 325
Query: 585 RLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQL---RVRIIDGIAQDQHMNP 641
+L E+ ++ EYM SL FL T K+L QL +I G+A + MN
Sbjct: 326 QLYAVVSEE-PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY 384
Query: 642 ------------------KISDFGMARMFGGDELQGNTKRIVGTY--GYMSPEYALEGVF 681
K++DFG+AR+ +E T R + + +PE AL G F
Sbjct: 385 VHRDLRAANILVGENLVCKVADFGLARLIEDNEY---TARQGAKFPIKWTAPEAALYGRF 441
Query: 682 SVKSDVFSFGVLMLEILSSKK--NTGVYNTDSFNLLGHAWSL-CKNDRAHELMDPVLQNE 738
++KSDV+SFG+L+ E+ + + G+ N + + + + + C + L D + Q
Sbjct: 442 TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQ-- 499
Query: 739 VSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFNLPSPKEPP 786
C ++ E+RPT + + + + F P+ P
Sbjct: 500 ---------------CWRKEPEERPTFEYLQAFLED-YFTSTEPQXQP 531
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 128/288 (44%), Gaps = 49/288 (17%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
E+ ++ KLG+G FG V+ G VA+K L + + F E ++ KL+H LV
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLV 242
Query: 585 RLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQL---RVRIIDGIAQDQHMNP 641
+L E+ I + EYM SL FL T K+L QL +I G+A + MN
Sbjct: 243 QLYAVVSEEPIYI-VGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY 301
Query: 642 ------------------KISDFGMARMFGGDELQGNTKRIVGTY--GYMSPEYALEGVF 681
K++DFG+AR+ +E T R + + +PE AL G F
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLIEDNEY---TARQGAKFPIKWTAPEAALYGRF 358
Query: 682 SVKSDVFSFGVLMLEILSSKK--NTGVYNTDSFNLLGHAWSL-CKNDRAHELMDPVLQNE 738
++KSDV+SFG+L+ E+ + + G+ N + + + + + C + L D + Q
Sbjct: 359 TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQ-- 416
Query: 739 VSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFNLPSPKEPP 786
C ++ E+RPT + + + + F P+ P
Sbjct: 417 ---------------CWRKEPEERPTFEYLQAFLED-YFTSTEPQXQP 448
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 124/276 (44%), Gaps = 48/276 (17%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
E+ ++ KLG+G FG V+ G VA+K L + + F E ++ KL+H LV
Sbjct: 8 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLV 66
Query: 585 RLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQL---RVRIIDGIAQDQHMNP 641
+L E+ I + EYM SL FL T K+L QL +I G+A + MN
Sbjct: 67 QLYAVVSEEPIXI-VTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY 125
Query: 642 ------------------KISDFGMARMFGGDELQGNTKRIVGTY--GYMSPEYALEGVF 681
K++DFG+AR+ +E T R + + +PE AL G F
Sbjct: 126 VHRDLRAANILVGENLVCKVADFGLARLIEDNE---XTARQGAKFPIKWTAPEAALYGRF 182
Query: 682 SVKSDVFSFGVLMLEILSSKK--NTGVYNTDSFNLLGHAWSL-CKNDRAHELMDPVLQNE 738
++KSDV+SFG+L+ E+ + + G+ N + + + + + C + L D + Q
Sbjct: 183 TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQ-- 240
Query: 739 VSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774
C ++ E+RPT + + + +
Sbjct: 241 ---------------CWRKEPEERPTFEYLQAFLED 261
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 124/277 (44%), Gaps = 50/277 (18%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
E+ ++ KLG+G FG V+ G VA+K L + + F E ++ KL+H LV
Sbjct: 11 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLV 69
Query: 585 RLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQL---RVRIIDGIAQDQHMNP 641
+L E+ I + EYM SL FL T K+L QL +I G+A + MN
Sbjct: 70 QLYAVVSEEPIYI-VTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY 128
Query: 642 ------------------KISDFGMARMFGGDEL---QGNTKRIVGTYGYMSPEYALEGV 680
K++DFG+AR+ +E QG I T +PE AL G
Sbjct: 129 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT----APEAALYGR 184
Query: 681 FSVKSDVFSFGVLMLEILSSKK--NTGVYNTDSFNLLGHAWSL-CKNDRAHELMDPVLQN 737
F++KSDV+SFG+L+ E+ + + G+ N + + + + + C + L D + Q
Sbjct: 185 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQ- 243
Query: 738 EVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774
C ++ E+RPT + + + +
Sbjct: 244 ----------------CWRKEPEERPTFEYLQAFLED 264
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 125/277 (45%), Gaps = 50/277 (18%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
E+ ++ KLG+G FG V+ G VA+K L + + F E ++ KL+H LV
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLV 76
Query: 585 RLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQL---RVRIIDGIAQDQHMNP 641
+L E+ I+I EYM SL FL K+L QL +I G+A + MN
Sbjct: 77 QLYAVVSEEPIYIVI-EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY 135
Query: 642 ------------------KISDFGMARMFGGDEL---QGNTKRIVGTYGYMSPEYALEGV 680
K++DFG+AR+ +E QG I T +PE AL G
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT----APEAALYGR 191
Query: 681 FSVKSDVFSFGVLMLEILSSKK--NTGVYNTDSFNLLGHAWSL-CKNDRAHELMDPVLQN 737
F++KSDV+SFG+L+ E+ + + G+ N + + + + + C + L D + Q
Sbjct: 192 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQ- 250
Query: 738 EVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774
C +++ E+RPT + + + +
Sbjct: 251 ----------------CWRKDPEERPTFEYLQAFLED 271
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 125/276 (45%), Gaps = 48/276 (17%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
E+ ++ KLG+G FG V+ G VA+K L + + F E ++ KL+H LV
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLV 76
Query: 585 RLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQL---RVRIIDGIAQDQHMNP 641
+L E+ I+I EYM SL FL K+L QL +I G+A + MN
Sbjct: 77 QLYAVVSEEPIYIVI-EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY 135
Query: 642 ------------------KISDFGMARMFGGDELQGNTKRIVGTY--GYMSPEYALEGVF 681
K++DFG+AR+ +E T R + + +PE AL G F
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNE---XTARQGAKFPIKWTAPEAALYGRF 192
Query: 682 SVKSDVFSFGVLMLEILSSKK--NTGVYNTDSFNLLGHAWSL-CKNDRAHELMDPVLQNE 738
++KSDV+SFG+L+ E+ + + G+ N + + + + + C + L D + Q
Sbjct: 193 TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQ-- 250
Query: 739 VSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774
C +++ E+RPT + + + +
Sbjct: 251 ---------------CWRKDPEERPTFEYLQAFLED 271
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 124/277 (44%), Gaps = 50/277 (18%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
E+ ++ KLG+G FG V+ G VA+K L + + F E ++ KL+H LV
Sbjct: 15 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLV 73
Query: 585 RLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQL---RVRIIDGIAQDQHMNP 641
+L E+ I + EYM SL FL T K+L QL +I G+A + MN
Sbjct: 74 QLYAVVSEEPIYI-VTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNY 132
Query: 642 ------------------KISDFGMARMFGGDEL---QGNTKRIVGTYGYMSPEYALEGV 680
K++DFG+AR+ +E QG I T +PE AL G
Sbjct: 133 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT----APEAALYGR 188
Query: 681 FSVKSDVFSFGVLMLEILSSKK--NTGVYNTDSFNLLGHAWSL-CKNDRAHELMDPVLQN 737
F++KSDV+SFG+L+ E+ + + G+ N + + + + + C + L D + Q
Sbjct: 189 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQ- 247
Query: 738 EVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774
C ++ E+RPT + + + +
Sbjct: 248 ----------------CWRKEPEERPTFEYLQAFLED 268
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 124/277 (44%), Gaps = 50/277 (18%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
E+ ++ KLG+G FG V+ G VA+K L + + F E ++ KL+H LV
Sbjct: 15 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLV 73
Query: 585 RLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQL---RVRIIDGIAQDQHMNP 641
+L E+ I + EYM SL FL T K+L QL +I G+A + MN
Sbjct: 74 QLYAVVSEEPIYI-VTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNY 132
Query: 642 ------------------KISDFGMARMFGGDEL---QGNTKRIVGTYGYMSPEYALEGV 680
K++DFG+AR+ +E QG I T +PE AL G
Sbjct: 133 VHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWT----APEAALYGR 188
Query: 681 FSVKSDVFSFGVLMLEILSSKK--NTGVYNTDSFNLLGHAWSL-CKNDRAHELMDPVLQN 737
F++KSDV+SFG+L+ E+ + + G+ N + + + + + C + L D + Q
Sbjct: 189 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQ- 247
Query: 738 EVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774
C ++ E+RPT + + + +
Sbjct: 248 ----------------CWRKEPEERPTFEYLQAFLED 268
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 124/277 (44%), Gaps = 50/277 (18%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
E+ ++ KLG+G FG V+ G VA+K L + + F E ++ KL+H LV
Sbjct: 7 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLV 65
Query: 585 RLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQL---RVRIIDGIAQDQHMNP 641
+L E+ I + EYM SL FL K+L QL +I G+A + MN
Sbjct: 66 QLYAVVSEEPIYI-VTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY 124
Query: 642 ------------------KISDFGMARMFGGDEL---QGNTKRIVGTYGYMSPEYALEGV 680
K++DFG+AR+ +E QG I T +PE AL G
Sbjct: 125 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT----APEAALYGR 180
Query: 681 FSVKSDVFSFGVLMLEILSSKK--NTGVYNTDSFNLLGHAWSL-CKNDRAHELMDPVLQN 737
F++KSDV+SFG+L+ E+ + + G+ N + + + + + C + L D + Q
Sbjct: 181 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQ- 239
Query: 738 EVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774
C +++ E+RPT + + + +
Sbjct: 240 ----------------CWRKDPEERPTFEYLQAFLED 260
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 128/290 (44%), Gaps = 53/290 (18%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLS--NQSGQGLKEFKNEMMLIAKLQHRN 582
E+ ++ KLG+G FG V+ G VA+K L N S + F E ++ KL+H
Sbjct: 185 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEA---FLQEAQVMKKLRHEK 241
Query: 583 LVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQL---RVRIIDGIAQDQHM 639
LV+L E+ I + EYM SL FL K+L QL +I G+A + M
Sbjct: 242 LVQLYAVVSEEPIYI-VTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 300
Query: 640 NP------------------KISDFGMARMFGGDELQGNTKRIVGTY--GYMSPEYALEG 679
N K++DFG+ R+ +E T R + + +PE AL G
Sbjct: 301 NYVHRDLRAANILVGENLVCKVADFGLGRLIEDNEY---TARQGAKFPIKWTAPEAALYG 357
Query: 680 VFSVKSDVFSFGVLMLEILSSKK--NTGVYNTDSFNLLGHAWSL-CKNDRAHELMDPVLQ 736
F++KSDV+SFG+L+ E+ + + G+ N + + + + + C + L D + Q
Sbjct: 358 RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQ 417
Query: 737 NEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFNLPSPKEPP 786
C +++ E+RPT + + + + F P+ P
Sbjct: 418 -----------------CWRKDPEERPTFEYLQAFLED-YFTSTEPQXQP 449
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 124/277 (44%), Gaps = 50/277 (18%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
E+ ++ KLG+G FG V+ G VA+K L + + F E ++ KL+H LV
Sbjct: 9 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLV 67
Query: 585 RLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQL---RVRIIDGIAQDQHMNP 641
+L E+ I + EYM SL FL K+L QL +I G+A + MN
Sbjct: 68 QLYAVVSEEPIYI-VTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY 126
Query: 642 ------------------KISDFGMARMFGGDEL---QGNTKRIVGTYGYMSPEYALEGV 680
K++DFG+AR+ +E QG I T +PE AL G
Sbjct: 127 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT----APEAALYGR 182
Query: 681 FSVKSDVFSFGVLMLEILSSKK--NTGVYNTDSFNLLGHAWSL-CKNDRAHELMDPVLQN 737
F++KSDV+SFG+L+ E+ + + G+ N + + + + + C + L D + Q
Sbjct: 183 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQ- 241
Query: 738 EVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774
C +++ E+RPT + + + +
Sbjct: 242 ----------------CWRKDPEERPTFEYLQAFLED 262
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 124/277 (44%), Gaps = 50/277 (18%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
E+ ++ KLG+G FG V+ G VA+K L + + F E ++ KL+H LV
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLV 76
Query: 585 RLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQL---RVRIIDGIAQDQHMNP 641
+L E+ I + EYM SL FL K+L QL +I G+A + MN
Sbjct: 77 QLYAVVSEEPIYI-VTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY 135
Query: 642 ------------------KISDFGMARMFGGDEL---QGNTKRIVGTYGYMSPEYALEGV 680
K++DFG+AR+ +E QG I T +PE AL G
Sbjct: 136 VHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT----APEAALYGR 191
Query: 681 FSVKSDVFSFGVLMLEILSSKK--NTGVYNTDSFNLLGHAWSL-CKNDRAHELMDPVLQN 737
F++KSDV+SFG+L+ E+ + + G+ N + + + + + C + L D + Q
Sbjct: 192 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQ- 250
Query: 738 EVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774
C +++ E+RPT + + + +
Sbjct: 251 ----------------CWRKDPEERPTFEYLQAFLED 271
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 124/277 (44%), Gaps = 50/277 (18%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
E+ ++ KLG+G FG V+ G VA+K L + + F E ++ KL+H LV
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLV 76
Query: 585 RLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQL---RVRIIDGIAQDQHMNP 641
+L E+ I + EYM SL FL K+L QL +I G+A + MN
Sbjct: 77 QLYAVVSEEPIYI-VTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY 135
Query: 642 ------------------KISDFGMARMFGGDEL---QGNTKRIVGTYGYMSPEYALEGV 680
K++DFG+AR+ +E QG I T +PE AL G
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT----APEAALYGR 191
Query: 681 FSVKSDVFSFGVLMLEILSSKK--NTGVYNTDSFNLLGHAWSL-CKNDRAHELMDPVLQN 737
F++KSDV+SFG+L+ E+ + + G+ N + + + + + C + L D + Q
Sbjct: 192 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQ- 250
Query: 738 EVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774
C +++ E+RPT + + + +
Sbjct: 251 ----------------CWRKDPEERPTFEYLQAFLED 271
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 130/289 (44%), Gaps = 53/289 (18%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
+ ++ +G G FG V K + ++VA+K++ ++S + K F E+ ++++ H N+V
Sbjct: 9 KEIEVEEVVGRGAFGVVCKAKW-RAKDVAIKQIESESER--KAFIVELRQLSRVNHPNIV 65
Query: 585 RLLGCCIEQGEKILIYEYMVNKSLDVFLF--DP----TKKHLLGWQLRVRIIDGIAQDQH 638
+L G C+ L+ EY SL L +P T H + W L+ G+A
Sbjct: 66 KLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCS--QGVAYLHS 121
Query: 639 MNPK----------------------ISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYA 676
M PK I DFG A ++Q + G+ +M+PE
Sbjct: 122 MQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA-----CDIQTHMTNNKGSAAWMAPEVF 176
Query: 677 LEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQ 736
+S K DVFS+G+++ E+++ +K +F ++ W++ R P+++
Sbjct: 177 EGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIM---WAVHNGTRP-----PLIK 228
Query: 737 NEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFNLPSPKEP 785
N LP + ++ C ++ RP+M ++V ++ + + P EP
Sbjct: 229 N---LPKPIE--SLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGADEP 272
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 130/289 (44%), Gaps = 53/289 (18%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
+ ++ +G G FG V K + ++VA+K++ ++S + K F E+ ++++ H N+V
Sbjct: 8 KEIEVEEVVGRGAFGVVCKAKW-RAKDVAIKQIESESER--KAFIVELRQLSRVNHPNIV 64
Query: 585 RLLGCCIEQGEKILIYEYMVNKSLDVFLF--DP----TKKHLLGWQLRVRIIDGIAQDQH 638
+L G C+ L+ EY SL L +P T H + W L+ G+A
Sbjct: 65 KLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCS--QGVAYLHS 120
Query: 639 MNPK----------------------ISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYA 676
M PK I DFG A ++Q + G+ +M+PE
Sbjct: 121 MQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA-----CDIQTHMTNNKGSAAWMAPEVF 175
Query: 677 LEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQ 736
+S K DVFS+G+++ E+++ +K +F ++ W++ R P+++
Sbjct: 176 EGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIM---WAVHNGTRP-----PLIK 227
Query: 737 NEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFNLPSPKEP 785
N LP + ++ C ++ RP+M ++V ++ + + P EP
Sbjct: 228 N---LPKPIE--SLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGADEP 271
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 124/277 (44%), Gaps = 50/277 (18%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
E+ ++ KLG+G FG V+ G VA+K L + + F E ++ KL+H LV
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLV 76
Query: 585 RLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQL---RVRIIDGIAQDQHMNP 641
+L E+ I + EYM SL FL K+L QL +I G+A + MN
Sbjct: 77 QLYAVVSEEPIYI-VCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY 135
Query: 642 ------------------KISDFGMARMFGGDEL---QGNTKRIVGTYGYMSPEYALEGV 680
K++DFG+AR+ +E QG I T +PE AL G
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT----APEAALYGR 191
Query: 681 FSVKSDVFSFGVLMLEILSSKK--NTGVYNTDSFNLLGHAWSL-CKNDRAHELMDPVLQN 737
F++KSDV+SFG+L+ E+ + + G+ N + + + + + C + L D + Q
Sbjct: 192 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQ- 250
Query: 738 EVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774
C +++ E+RPT + + + +
Sbjct: 251 ----------------CWRKDPEERPTFEYLQAFLED 271
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 124/277 (44%), Gaps = 50/277 (18%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
E+ ++ KLG+G FG V+ G VA+K L + + F E ++ K++H LV
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKIRHEKLV 76
Query: 585 RLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQL---RVRIIDGIAQDQHMNP 641
+L E+ I + EYM SL FL K+L QL +I G+A + MN
Sbjct: 77 QLYAVVSEEPIYI-VTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY 135
Query: 642 ------------------KISDFGMARMFGGDEL---QGNTKRIVGTYGYMSPEYALEGV 680
K++DFG+AR+ +E QG I T +PE AL G
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT----APEAALYGR 191
Query: 681 FSVKSDVFSFGVLMLEILSSKK--NTGVYNTDSFNLLGHAWSL-CKNDRAHELMDPVLQN 737
F++KSDV+SFG+L+ E+ + + G+ N + + + + + C + L D + Q
Sbjct: 192 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQ- 250
Query: 738 EVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774
C +++ E+RPT + + + +
Sbjct: 251 ----------------CWRKDPEERPTFEYLQAFLED 271
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 124/277 (44%), Gaps = 50/277 (18%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
E+ ++ KLG+G FG V+ G VA+K L + + F E ++ KL+H LV
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLV 76
Query: 585 RLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQL---RVRIIDGIAQDQHMNP 641
+L E+ I++ EYM L FL K+L QL +I G+A + MN
Sbjct: 77 QLYAVVSEEPIYIVM-EYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY 135
Query: 642 ------------------KISDFGMARMFGGDEL---QGNTKRIVGTYGYMSPEYALEGV 680
K++DFG+AR+ +E QG I T +PE AL G
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT----APEAALYGR 191
Query: 681 FSVKSDVFSFGVLMLEILSSKK--NTGVYNTDSFNLLGHAWSL-CKNDRAHELMDPVLQN 737
F++KSDV+SFG+L+ E+ + + G+ N + + + + + C + L D + Q
Sbjct: 192 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQ- 250
Query: 738 EVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774
C +++ E+RPT + + + +
Sbjct: 251 ----------------CWRKDPEERPTFEYLQAFLED 271
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 123/277 (44%), Gaps = 50/277 (18%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
E+ ++ KLG+G FG V+ G VA+K L + + F E ++ KL+H LV
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLV 76
Query: 585 RLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQL---RVRIIDGIAQDQHMNP 641
+L E+ I + EYM L FL K+L QL +I G+A + MN
Sbjct: 77 QLYAVVSEEPIYI-VTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY 135
Query: 642 ------------------KISDFGMARMFGGDEL---QGNTKRIVGTYGYMSPEYALEGV 680
K++DFG+AR+ +E QG I T +PE AL G
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT----APEAALYGR 191
Query: 681 FSVKSDVFSFGVLMLEILSSKK--NTGVYNTDSFNLLGHAWSL-CKNDRAHELMDPVLQN 737
F++KSDV+SFG+L+ E+ + + G+ N + + + + + C + L D + Q
Sbjct: 192 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQ- 250
Query: 738 EVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774
C +++ E+RPT + + + +
Sbjct: 251 ----------------CWRKDPEERPTFEYLQAFLED 271
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 95/196 (48%), Gaps = 32/196 (16%)
Query: 532 KLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCI 591
++G G FG V+ G LN +VA+K + + ++F E ++ KL H LV+L G C+
Sbjct: 14 EIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 72
Query: 592 EQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQ----LRVRIIDGIAQDQHMNP------ 641
EQ L++E+M + L +L T++ L + + + + +G+A + +
Sbjct: 73 EQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEEASVIHRDLA 130
Query: 642 ------------KISDFGMARMFGGDELQGNTKRIVGT---YGYMSPEYALEGVFSVKSD 686
K+SDFGM R D+ +T GT + SPE +S KSD
Sbjct: 131 ARNCLVGENQVIKVSDFGMTRFVLDDQYTSST----GTKFPVKWASPEVFSFSRYSSKSD 186
Query: 687 VFSFGVLMLEILSSKK 702
V+SFGVLM E+ S K
Sbjct: 187 VWSFGVLMWEVFSEGK 202
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 108/235 (45%), Gaps = 52/235 (22%)
Query: 513 PLFSFASVTAAT--------ENFSIQSKLGEGGFGPVYKGRL------LNGQEVAVKRLS 558
P +SFA T++ +N ++ LG G FG VY+G++ + +VAVK L
Sbjct: 11 PNYSFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP 70
Query: 559 NQ-SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFD--- 614
S Q +F E ++I+KL H+N+VR +G ++ + ++ E M L FL +
Sbjct: 71 EVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRP 130
Query: 615 -PTKKHLLGWQLRVRIIDGIA------QDQHM---------------NP----KISDFGM 648
P++ L + + IA ++ H P KI DFGM
Sbjct: 131 RPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM 190
Query: 649 ARMFGGDELQGNTKRIVG----TYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS 699
AR D + + R G +M PE +EG+F+ K+D +SFGVL+ EI S
Sbjct: 191 AR----DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 99/213 (46%), Gaps = 48/213 (22%)
Query: 532 KLGEGGFGPVYKGRLL------NGQEVAVKRLSNQSGQGLKE-FKNEMMLIAKLQHRNLV 584
+LGE FG VYKG L Q VA+K L +++ L+E F++E ML A+LQH N+V
Sbjct: 33 ELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVV 92
Query: 585 RLLGCCIEQGEKILIYEYMVNKSLDVFLF-------------DPTKKHLLGWQLRVRIID 631
LLG + +I+ Y + L FL D T K L V ++
Sbjct: 93 CLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVA 152
Query: 632 GIAQDQH----------------------MNPKISDFGMAR-MFGGD--ELQGNTKRIVG 666
IA +N KISD G+ R ++ D +L GN+ +
Sbjct: 153 QIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNS---LL 209
Query: 667 TYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS 699
+M+PE + G FS+ SD++S+GV++ E+ S
Sbjct: 210 PIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 95/196 (48%), Gaps = 32/196 (16%)
Query: 532 KLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCI 591
++G G FG V+ G LN +VA+K + + ++F E ++ KL H LV+L G C+
Sbjct: 12 EIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 70
Query: 592 EQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQ----LRVRIIDGIAQ------------ 635
EQ L++E+M + L +L T++ L + + + + +G+A
Sbjct: 71 EQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLA 128
Query: 636 ------DQHMNPKISDFGMARMFGGDELQGNTKRIVGT---YGYMSPEYALEGVFSVKSD 686
++ K+SDFGM R D+ +T GT + SPE +S KSD
Sbjct: 129 ARNCLVGENQVIKVSDFGMTRFVLDDQYTSST----GTKFPVKWASPEVFSFSRYSSKSD 184
Query: 687 VFSFGVLMLEILSSKK 702
V+SFGVLM E+ S K
Sbjct: 185 VWSFGVLMWEVFSEGK 200
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 95/196 (48%), Gaps = 32/196 (16%)
Query: 532 KLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCI 591
++G G FG V+ G LN +VA+K + + ++F E ++ KL H LV+L G C+
Sbjct: 14 EIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 72
Query: 592 EQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQ----LRVRIIDGIAQ------------ 635
EQ L++E+M + L +L T++ L + + + + +G+A
Sbjct: 73 EQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLA 130
Query: 636 ------DQHMNPKISDFGMARMFGGDELQGNTKRIVGT---YGYMSPEYALEGVFSVKSD 686
++ K+SDFGM R D+ +T GT + SPE +S KSD
Sbjct: 131 ARNCLVGENQVIKVSDFGMTRFVLDDQYTSST----GTKFPVKWASPEVFSFSRYSSKSD 186
Query: 687 VFSFGVLMLEILSSKK 702
V+SFGVLM E+ S K
Sbjct: 187 VWSFGVLMWEVFSEGK 202
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 95/196 (48%), Gaps = 32/196 (16%)
Query: 532 KLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCI 591
++G G FG V+ G LN +VA+K + + ++F E ++ KL H LV+L G C+
Sbjct: 17 EIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 75
Query: 592 EQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQ----LRVRIIDGIAQ------------ 635
EQ L++E+M + L +L T++ L + + + + +G+A
Sbjct: 76 EQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLA 133
Query: 636 ------DQHMNPKISDFGMARMFGGDELQGNTKRIVGT---YGYMSPEYALEGVFSVKSD 686
++ K+SDFGM R D+ +T GT + SPE +S KSD
Sbjct: 134 ARNCLVGENQVIKVSDFGMTRFVLDDQYTSST----GTKFPVKWASPEVFSFSRYSSKSD 189
Query: 687 VFSFGVLMLEILSSKK 702
V+SFGVLM E+ S K
Sbjct: 190 VWSFGVLMWEVFSEGK 205
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 99/213 (46%), Gaps = 48/213 (22%)
Query: 532 KLGEGGFGPVYKGRLL------NGQEVAVKRLSNQSGQGLKE-FKNEMMLIAKLQHRNLV 584
+LGE FG VYKG L Q VA+K L +++ L+E F++E ML A+LQH N+V
Sbjct: 16 ELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVV 75
Query: 585 RLLGCCIEQGEKILIYEYMVNKSLDVFLF-------------DPTKKHLLGWQLRVRIID 631
LLG + +I+ Y + L FL D T K L V ++
Sbjct: 76 CLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVA 135
Query: 632 GIAQDQH----------------------MNPKISDFGMAR-MFGGD--ELQGNTKRIVG 666
IA +N KISD G+ R ++ D +L GN+ +
Sbjct: 136 QIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPI- 194
Query: 667 TYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS 699
+M+PE + G FS+ SD++S+GV++ E+ S
Sbjct: 195 --RWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 99/209 (47%), Gaps = 29/209 (13%)
Query: 526 NFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQS--GQGLKEFKNEMMLIAKLQHRNL 583
+ +I+ K+G G FG V++ +G +VAVK L Q + + EF E+ ++ +L+H N+
Sbjct: 38 DLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNI 96
Query: 584 VRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ-------- 635
V +G + ++ EY+ SL L + L + R+ + +A+
Sbjct: 97 VLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR 156
Query: 636 ----------------DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEG 679
D+ K+ DFG++R+ L ++K GT +M+PE +
Sbjct: 157 NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFL--SSKSAAGTPEWMAPEVLRDE 214
Query: 680 VFSVKSDVFSFGVLMLEILSSKKNTGVYN 708
+ KSDV+SFGV++ E+ + ++ G N
Sbjct: 215 PSNEKSDVYSFGVILWELATLQQPWGNLN 243
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 95/218 (43%), Gaps = 40/218 (18%)
Query: 526 NFSIQSKLGEGGFGPVYKGR---LLNGQE---VAVKRLSNQSGQGLKEFKNEMMLIAKLQ 579
+ ++ +LGEG FG V+ LL Q+ VAVK L S ++F+ E L+ LQ
Sbjct: 19 DIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQ 78
Query: 580 HRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFL--FDPTKKHLLGWQLRVRIIDGIAQ-- 635
H+++VR G C E ++++EYM + L+ FL P K L G + G+ Q
Sbjct: 79 HQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLL 138
Query: 636 ------------------------------DQHMNPKISDFGMARMFGGDELQGNTKRIV 665
Q + KI DFGM+R + R +
Sbjct: 139 AVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTM 198
Query: 666 GTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKN 703
+M PE L F+ +SDV+SFGV++ EI + K
Sbjct: 199 LPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQ 236
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 127/291 (43%), Gaps = 55/291 (18%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
E+ + +LG G FG V+ G +VA+K L + + F E ++ KL+H LV
Sbjct: 9 ESLQLIKRLGNGQFGEVWMGTWNGNTKVAIKTLKPGT-MSPESFLEEAQIMKKLKHDKLV 67
Query: 585 RLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQL---RVRIIDGIAQDQHMNP 641
+L E+ I + EYM SL FL D + L L ++ G+A + MN
Sbjct: 68 QLYAVVSEEPIYI-VTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNY 126
Query: 642 ------------------KISDFGMARMFGGDELQGNTKRIVGTY--GYMSPEYALEGVF 681
KI+DFG+AR+ +E T R + + +PE AL G F
Sbjct: 127 IHRDLRSANILVGNGLICKIADFGLARLIEDNE---XTARQGAKFPIKWTAPEAALYGRF 183
Query: 682 SVKSDVFSFGVLMLEILSSKK--NTGVYNTDSFNLLGHAWSL-CKND---RAHELMDPVL 735
++KSDV+SFG+L+ E+++ + G+ N + + + + C D HELM
Sbjct: 184 TIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPCPQDCPISLHELM---- 239
Query: 736 QNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFNLPSPKEPP 786
+ C +++ E+RPT + S + + F P+ P
Sbjct: 240 ----------------IHCWKKDPEERPTFEYLQSFLED-YFTATEPQYQP 273
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 95/218 (43%), Gaps = 40/218 (18%)
Query: 526 NFSIQSKLGEGGFGPVYKGR---LLNGQE---VAVKRLSNQSGQGLKEFKNEMMLIAKLQ 579
+ ++ +LGEG FG V+ LL Q+ VAVK L S ++F+ E L+ LQ
Sbjct: 13 DIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQ 72
Query: 580 HRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFL--FDPTKKHLLGWQLRVRIIDGIAQ-- 635
H+++VR G C E ++++EYM + L+ FL P K L G + G+ Q
Sbjct: 73 HQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLL 132
Query: 636 ------------------------------DQHMNPKISDFGMARMFGGDELQGNTKRIV 665
Q + KI DFGM+R + R +
Sbjct: 133 AVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTM 192
Query: 666 GTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKN 703
+M PE L F+ +SDV+SFGV++ EI + K
Sbjct: 193 LPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQ 230
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 98/209 (46%), Gaps = 29/209 (13%)
Query: 526 NFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQS--GQGLKEFKNEMMLIAKLQHRNL 583
+ +I+ K+G G FG V++ +G +VAVK L Q + + EF E+ ++ +L+H N+
Sbjct: 38 DLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNI 96
Query: 584 VRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ-------- 635
V +G + ++ EY+ SL L + L + R+ + +A+
Sbjct: 97 VLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR 156
Query: 636 ----------------DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEG 679
D+ K+ DFG++R+ L +K GT +M+PE +
Sbjct: 157 NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLX--SKXAAGTPEWMAPEVLRDE 214
Query: 680 VFSVKSDVFSFGVLMLEILSSKKNTGVYN 708
+ KSDV+SFGV++ E+ + ++ G N
Sbjct: 215 PSNEKSDVYSFGVILWELATLQQPWGNLN 243
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 95/218 (43%), Gaps = 40/218 (18%)
Query: 526 NFSIQSKLGEGGFGPVYKGR---LLNGQE---VAVKRLSNQSGQGLKEFKNEMMLIAKLQ 579
+ ++ +LGEG FG V+ LL Q+ VAVK L S ++F+ E L+ LQ
Sbjct: 42 DIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQ 101
Query: 580 HRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFL--FDPTKKHLLGWQLRVRIIDGIAQ-- 635
H+++VR G C E ++++EYM + L+ FL P K L G + G+ Q
Sbjct: 102 HQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLL 161
Query: 636 ------------------------------DQHMNPKISDFGMARMFGGDELQGNTKRIV 665
Q + KI DFGM+R + R +
Sbjct: 162 AVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTM 221
Query: 666 GTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKN 703
+M PE L F+ +SDV+SFGV++ EI + K
Sbjct: 222 LPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQ 259
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 107/235 (45%), Gaps = 52/235 (22%)
Query: 513 PLFSFASVTAAT--------ENFSIQSKLGEGGFGPVYKGRL------LNGQEVAVKRLS 558
P +SFA T++ +N ++ LG G FG VY+G++ + +VAVK L
Sbjct: 11 PNYSFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP 70
Query: 559 NQ-SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFD--- 614
S Q +F E ++I+K H+N+VR +G ++ + ++ E M L FL +
Sbjct: 71 EVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRP 130
Query: 615 -PTKKHLLGWQLRVRIIDGIA------QDQHM---------------NP----KISDFGM 648
P++ L + + IA ++ H P KI DFGM
Sbjct: 131 RPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM 190
Query: 649 ARMFGGDELQGNTKRIVG----TYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS 699
AR D + + R G +M PE +EG+F+ K+D +SFGVL+ EI S
Sbjct: 191 AR----DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 100/216 (46%), Gaps = 33/216 (15%)
Query: 512 LPLFSFASVTAATENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNE 571
+P S V +E +Q ++G G FG V+ G LN +VA+K + S +F E
Sbjct: 15 VPRGSLHMVIDPSELTFVQ-EIGSGQFGLVHLGYWLNKDKVAIKTIKEGS-MSEDDFIEE 72
Query: 572 MMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDP----TKKHLLGWQLRV 627
++ KL H LV+L G C+EQ L++E+M + L +L + LLG L V
Sbjct: 73 AEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDV 132
Query: 628 RIIDGIAQ------------------DQHMNPKISDFGMARMFGGDELQGNTKRIVGT-- 667
+G+A ++ K+SDFGM R D+ +T GT
Sbjct: 133 --CEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST----GTKF 186
Query: 668 -YGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKK 702
+ SPE +S KSDV+SFGVLM E+ S K
Sbjct: 187 PVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGK 222
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 107/235 (45%), Gaps = 52/235 (22%)
Query: 513 PLFSFASVTAAT--------ENFSIQSKLGEGGFGPVYKGRL------LNGQEVAVKRLS 558
P +SFA T++ +N ++ LG G FG VY+G++ + +VAVK L
Sbjct: 17 PNYSFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP 76
Query: 559 NQ-SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFD--- 614
S Q +F E ++I+K H+N+VR +G ++ + ++ E M L FL +
Sbjct: 77 EVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRP 136
Query: 615 -PTKKHLLGWQLRVRIIDGIA------QDQHM---------------NP----KISDFGM 648
P++ L + + IA ++ H P KI DFGM
Sbjct: 137 RPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM 196
Query: 649 ARMFGGDELQGNTKRIVG----TYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS 699
AR D + + R G +M PE +EG+F+ K+D +SFGVL+ EI S
Sbjct: 197 AR----DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 92/196 (46%), Gaps = 32/196 (16%)
Query: 532 KLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCI 591
++G G FG V+ G LN +VA+K + + ++F E ++ KL H LV+L G C+
Sbjct: 15 EIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 73
Query: 592 EQGEKILIYEYMVNKSLDVFLFDP----TKKHLLGWQLRVRIIDGIAQ------------ 635
EQ L+ E+M + L +L + LLG L V +G+A
Sbjct: 74 EQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDV--CEGMAYLEEACVIHRDLA 131
Query: 636 ------DQHMNPKISDFGMARMFGGDELQGNTKRIVGT---YGYMSPEYALEGVFSVKSD 686
++ K+SDFGM R D+ +T GT + SPE +S KSD
Sbjct: 132 ARNCLVGENQVIKVSDFGMTRFVLDDQYTSST----GTKFPVKWASPEVFSFSRYSSKSD 187
Query: 687 VFSFGVLMLEILSSKK 702
V+SFGVLM E+ S K
Sbjct: 188 VWSFGVLMWEVFSEGK 203
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 107/235 (45%), Gaps = 52/235 (22%)
Query: 513 PLFSFASVTAAT--------ENFSIQSKLGEGGFGPVYKGRL------LNGQEVAVKRLS 558
P + FA T++ +N ++ LG G FG VY+G++ + +VAVK L
Sbjct: 25 PNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP 84
Query: 559 NQ-SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFD--- 614
S Q +F E ++I+KL H+N+VR +G ++ + ++ E M L FL +
Sbjct: 85 EVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRP 144
Query: 615 -PTKKHLLGWQLRVRIIDGIA------QDQHM---------------NP----KISDFGM 648
P++ L + + IA ++ H P KI DFGM
Sbjct: 145 RPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM 204
Query: 649 ARMFGGDELQGNTKRIVG----TYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS 699
AR D + + R G +M PE +EG+F+ K+D +SFGVL+ EI S
Sbjct: 205 AR----DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 107/235 (45%), Gaps = 52/235 (22%)
Query: 513 PLFSFASVTAAT--------ENFSIQSKLGEGGFGPVYKGRL------LNGQEVAVKRLS 558
P +SFA T++ +N ++ LG G FG VY+G++ + +VAVK L
Sbjct: 37 PNYSFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP 96
Query: 559 NQ-SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFD--- 614
S Q +F E ++I+K H+N+VR +G ++ + ++ E M L FL +
Sbjct: 97 EVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRP 156
Query: 615 -PTKKHLLGWQLRVRIIDGIA------QDQHM---------------NP----KISDFGM 648
P++ L + + IA ++ H P KI DFGM
Sbjct: 157 RPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM 216
Query: 649 ARMFGGDELQGNTKRIVG----TYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS 699
AR D + + R G +M PE +EG+F+ K+D +SFGVL+ EI S
Sbjct: 217 AR----DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 135/315 (42%), Gaps = 64/315 (20%)
Query: 522 AATENFSIQSKLGEGGFGPVYKGR---LLNGQ---EVAVKRLSNQSGQGLK-EFKNEMML 574
+ E ++ +LG+G FG VY+G ++ G+ VAVK ++ + + EF NE +
Sbjct: 14 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASV 73
Query: 575 IAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFD-------------PTKKHLL 621
+ ++VRLLG + +++ E M + L +L PT + ++
Sbjct: 74 MKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMI 133
Query: 622 GWQLRVRIIDGIAQ------------------DQHMNPKISDFGMAR-MFGGDELQGNTK 662
Q+ I DG+A KI DFGM R ++ D + K
Sbjct: 134 --QMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGK 191
Query: 663 RIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEI--LSSKKNTGVYNTDSFNLLGHAWS 720
++ +M+PE +GVF+ SD++SFGV++ EI L+ + G+ N +
Sbjct: 192 GLLPVR-WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGY 250
Query: 721 LCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFNLP 780
L + D E R ++ +C Q N + RPT ++V+++ ++L
Sbjct: 251 LDQPDNCPE----------------RVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL---- 290
Query: 781 SPKEPPFTTFTKGKN 795
P P + F +N
Sbjct: 291 HPSFPEVSFFHSEEN 305
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 106/235 (45%), Gaps = 52/235 (22%)
Query: 513 PLFSFASVTAAT--------ENFSIQSKLGEGGFGPVYKGRL------LNGQEVAVKRLS 558
P + FA T++ +N ++ LG G FG VY+G++ + +VAVK L
Sbjct: 25 PNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP 84
Query: 559 N-QSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFD--- 614
S Q +F E ++I+K H+N+VR +G ++ + ++ E M L FL +
Sbjct: 85 EVYSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRP 144
Query: 615 -PTKKHLLGWQLRVRIIDGIA------QDQHM---------------NP----KISDFGM 648
P++ L + + IA ++ H P KI DFGM
Sbjct: 145 RPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM 204
Query: 649 ARMFGGDELQGNTKRIVG----TYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS 699
AR D + + R G +M PE +EG+F+ K+D +SFGVL+ EI S
Sbjct: 205 AR----DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 107/235 (45%), Gaps = 52/235 (22%)
Query: 513 PLFSFASVTAAT--------ENFSIQSKLGEGGFGPVYKGRL------LNGQEVAVKRLS 558
P +SFA T++ +N ++ LG G FG VY+G++ + +VAVK L
Sbjct: 11 PNYSFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP 70
Query: 559 NQ-SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFD--- 614
S Q +F E ++I+K H+N+VR +G ++ + ++ E M L FL +
Sbjct: 71 EVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRP 130
Query: 615 -PTKKHLLGWQLRVRIIDGIA------QDQHM---------------NP----KISDFGM 648
P++ L + + IA ++ H P KI DFGM
Sbjct: 131 RPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM 190
Query: 649 ARMFGGDELQGNTKRIVG----TYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS 699
A+ D + + R G +M PE +EG+F+ K+D +SFGVL+ EI S
Sbjct: 191 AQ----DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 106/235 (45%), Gaps = 52/235 (22%)
Query: 513 PLFSFASVTAAT--------ENFSIQSKLGEGGFGPVYKGRL------LNGQEVAVKRLS 558
P + FA T++ +N ++ LG G FG VY+G++ + +VAVK L
Sbjct: 25 PNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP 84
Query: 559 NQ-SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFD--- 614
S Q +F E ++I+K H+N+VR +G ++ + ++ E M L FL +
Sbjct: 85 EVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRP 144
Query: 615 -PTKKHLLGWQLRVRIIDGIA------QDQHM---------------NP----KISDFGM 648
P++ L + + IA ++ H P KI DFGM
Sbjct: 145 RPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM 204
Query: 649 ARMFGGDELQGNTKRIVG----TYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS 699
AR D + + R G +M PE +EG+F+ K+D +SFGVL+ EI S
Sbjct: 205 AR----DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 127/269 (47%), Gaps = 42/269 (15%)
Query: 533 LGEGGFGPVYKGRLLN--GQEV--AVKRLSNQSGQG-LKEFKNEMMLIAKLQHRNLVRLL 587
+G G FG VY G LL+ G+++ AVK L+ + G + +F E +++ H N++ LL
Sbjct: 97 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 156
Query: 588 GCCIE-QGEKILIYEYMVNKSLDVFL----FDPTKKHLLGWQLRV-RIIDGIAQ------ 635
G C+ +G +++ YM + L F+ +PT K L+G+ L+V + + +A
Sbjct: 157 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHR 216
Query: 636 ---------DQHMNPKISDFGMARMFGGDELQG--NTKRIVGTYGYMSPEYALEGVFSVK 684
D+ K++DFG+AR E N +M+ E F+ K
Sbjct: 217 DLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTK 276
Query: 685 SDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPML 744
SDV+SFGVL+ E+++ + + ++F++ + + + DP+ +
Sbjct: 277 SDVWSFGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYE-------- 327
Query: 745 VRYINVALLCVQENAEDRPTMSDVVSMIN 773
V L C AE RP+ S++VS I+
Sbjct: 328 -----VMLKCWHPKAEMRPSFSELVSRIS 351
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 127/269 (47%), Gaps = 42/269 (15%)
Query: 533 LGEGGFGPVYKGRLLN--GQEV--AVKRLSNQSGQG-LKEFKNEMMLIAKLQHRNLVRLL 587
+G G FG VY G LL+ G+++ AVK L+ + G + +F E +++ H N++ LL
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 588 GCCIE-QGEKILIYEYMVNKSLDVFL----FDPTKKHLLGWQLRV-RIIDGIAQ------ 635
G C+ +G +++ YM + L F+ +PT K L+G+ L+V + + +A
Sbjct: 96 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHR 155
Query: 636 ---------DQHMNPKISDFGMARMFGGDELQG--NTKRIVGTYGYMSPEYALEGVFSVK 684
D+ K++DFG+AR E N +M+ E F+ K
Sbjct: 156 DLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTK 215
Query: 685 SDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPML 744
SDV+SFGVL+ E+++ + + ++F++ + + + DP+ +
Sbjct: 216 SDVWSFGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYE-------- 266
Query: 745 VRYINVALLCVQENAEDRPTMSDVVSMIN 773
V L C AE RP+ S++VS I+
Sbjct: 267 -----VMLKCWHPKAEMRPSFSELVSRIS 290
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 106/235 (45%), Gaps = 52/235 (22%)
Query: 513 PLFSFASVTAAT--------ENFSIQSKLGEGGFGPVYKGRL------LNGQEVAVKRLS 558
P + FA T++ +N ++ LG G FG VY+G++ + +VAVK L
Sbjct: 10 PNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP 69
Query: 559 NQ-SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFD--- 614
S Q +F E ++I+K H+N+VR +G ++ + ++ E M L FL +
Sbjct: 70 EVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRP 129
Query: 615 -PTKKHLLGWQLRVRIIDGIA------QDQHM---------------NP----KISDFGM 648
P++ L + + IA ++ H P KI DFGM
Sbjct: 130 RPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM 189
Query: 649 ARMFGGDELQGNTKRIVG----TYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS 699
AR D + + R G +M PE +EG+F+ K+D +SFGVL+ EI S
Sbjct: 190 AR----DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 127/269 (47%), Gaps = 42/269 (15%)
Query: 533 LGEGGFGPVYKGRLLN--GQEV--AVKRLSNQSGQG-LKEFKNEMMLIAKLQHRNLVRLL 587
+G G FG VY G LL+ G+++ AVK L+ + G + +F E +++ H N++ LL
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 588 GCCIE-QGEKILIYEYMVNKSLDVFL----FDPTKKHLLGWQLRV-RIIDGIAQ------ 635
G C+ +G +++ YM + L F+ +PT K L+G+ L+V + + +A
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHR 157
Query: 636 ---------DQHMNPKISDFGMARMFGGDELQG--NTKRIVGTYGYMSPEYALEGVFSVK 684
D+ K++DFG+AR E N +M+ E F+ K
Sbjct: 158 DLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTK 217
Query: 685 SDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPML 744
SDV+SFGVL+ E+++ + + ++F++ + + + DP+ +
Sbjct: 218 SDVWSFGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYE-------- 268
Query: 745 VRYINVALLCVQENAEDRPTMSDVVSMIN 773
V L C AE RP+ S++VS I+
Sbjct: 269 -----VMLKCWHPKAEMRPSFSELVSRIS 292
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 106/235 (45%), Gaps = 52/235 (22%)
Query: 513 PLFSFASVTAAT--------ENFSIQSKLGEGGFGPVYKGRL------LNGQEVAVKRLS 558
P + FA T++ +N ++ LG G FG VY+G++ + +VAVK L
Sbjct: 2 PNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP 61
Query: 559 NQ-SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFD--- 614
S Q +F E ++I+K H+N+VR +G ++ + ++ E M L FL +
Sbjct: 62 EVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRP 121
Query: 615 -PTKKHLLGWQLRVRIIDGIA------QDQHM---------------NP----KISDFGM 648
P++ L + + IA ++ H P KI DFGM
Sbjct: 122 RPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM 181
Query: 649 ARMFGGDELQGNTKRIVG----TYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS 699
AR D + + R G +M PE +EG+F+ K+D +SFGVL+ EI S
Sbjct: 182 AR----DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 137/315 (43%), Gaps = 64/315 (20%)
Query: 522 AATENFSIQSKLGEGGFGPVYKGR---LLNGQ---EVAVKRLSNQSGQGLK-EFKNEMML 574
+ E ++ +LG+G FG VY+G ++ G+ VAVK ++ + + EF NE +
Sbjct: 14 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASV 73
Query: 575 IAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFD-------------PTKKHLL 621
+ ++VRLLG + +++ E M + L +L PT + ++
Sbjct: 74 MKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMI 133
Query: 622 GWQLRVRIIDGIA-----QDQHMN-------------PKISDFGMAR-MFGGDELQGNTK 662
Q+ I DG+A + H N KI DFGM R ++ D + K
Sbjct: 134 --QMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGK 191
Query: 663 RIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEI--LSSKKNTGVYNTDSFNLLGHAWS 720
++ +M+PE +GVF+ SD++SFGV++ EI L+ + G+ N +
Sbjct: 192 GLLPVR-WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGY 250
Query: 721 LCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFNLP 780
L + D E R ++ +C Q N RPT ++V+++ ++L
Sbjct: 251 LDQPDNCPE----------------RVTDLMRMCWQFNPNMRPTFLEIVNLLKDDL---- 290
Query: 781 SPKEPPFTTFTKGKN 795
P P + F +N
Sbjct: 291 HPSFPEVSFFHSEEN 305
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 106/235 (45%), Gaps = 52/235 (22%)
Query: 513 PLFSFASVTAAT--------ENFSIQSKLGEGGFGPVYKGRL------LNGQEVAVKRLS 558
P + FA T++ +N ++ LG G FG VY+G++ + +VAVK L
Sbjct: 27 PNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP 86
Query: 559 NQ-SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFD--- 614
S Q +F E ++I+K H+N+VR +G ++ + ++ E M L FL +
Sbjct: 87 EVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRP 146
Query: 615 -PTKKHLLGWQLRVRIIDGIA------QDQHM---------------NP----KISDFGM 648
P++ L + + IA ++ H P KI DFGM
Sbjct: 147 RPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM 206
Query: 649 ARMFGGDELQGNTKRIVG----TYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS 699
AR D + + R G +M PE +EG+F+ K+D +SFGVL+ EI S
Sbjct: 207 AR----DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 106/235 (45%), Gaps = 52/235 (22%)
Query: 513 PLFSFASVTAAT--------ENFSIQSKLGEGGFGPVYKGRL------LNGQEVAVKRLS 558
P + FA T++ +N ++ LG G FG VY+G++ + +VAVK L
Sbjct: 10 PNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP 69
Query: 559 NQ-SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFD--- 614
S Q +F E ++I+K H+N+VR +G ++ + ++ E M L FL +
Sbjct: 70 EVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRP 129
Query: 615 -PTKKHLLGWQLRVRIIDGIA------QDQHM---------------NP----KISDFGM 648
P++ L + + IA ++ H P KI DFGM
Sbjct: 130 RPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM 189
Query: 649 ARMFGGDELQGNTKRIVG----TYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS 699
AR D + + R G +M PE +EG+F+ K+D +SFGVL+ EI S
Sbjct: 190 AR----DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 123/274 (44%), Gaps = 56/274 (20%)
Query: 526 NFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
+ +++ KLG G +G VY+G VAVK L + + ++EF E ++ +++H NLV
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 77
Query: 585 RLLGCCIEQGEKILIYEYMVNKSL--------------DVFLFDPT----------KKHL 620
+LLG C + +I E+M +L V L+ T KK+
Sbjct: 78 QLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 137
Query: 621 LGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGV 680
+ L R + + + H+ K++DFG++R+ GD + + +PE
Sbjct: 138 IHRDLAAR--NCLVGENHLV-KVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNK 193
Query: 681 FSVKSDVFSFGVLMLEILSSKKN--TGVYNTDSFNLLGHAWSLCK----NDRAHELMDPV 734
FS+KSDV++FGVL+ EI + + G+ + + LL + + + ++ +ELM
Sbjct: 194 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRA- 252
Query: 735 LQNEVSLPMLVRYINVALLCVQENAEDRPTMSDV 768
C Q N DRP+ +++
Sbjct: 253 -------------------CWQWNPSDRPSFAEI 267
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 105/233 (45%), Gaps = 48/233 (20%)
Query: 513 PLFSFASVTAAT--------ENFSIQSKLGEGGFGPVYKGRL------LNGQEVAVKRLS 558
P + FA T++ +N ++ LG G FG VY+G++ + +VAVK L
Sbjct: 51 PNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP 110
Query: 559 NQ-SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFD--- 614
S Q +F E ++I+K H+N+VR +G ++ + ++ E M L FL +
Sbjct: 111 EVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRP 170
Query: 615 -PTKKHLLGWQLRVRIIDGIA------QDQHM---------------NP----KISDFGM 648
P++ L + + IA ++ H P KI DFGM
Sbjct: 171 RPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM 230
Query: 649 ARMF--GGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS 699
AR G +G + +M PE +EG+F+ K+D +SFGVL+ EI S
Sbjct: 231 ARDIYRAGYYRKGGCAML--PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 130/273 (47%), Gaps = 50/273 (18%)
Query: 533 LGEGGFGPVYKGRLLN--GQEV--AVKRLSNQSGQG-LKEFKNEMMLIAKLQHRNLVRLL 587
+G G FG VY G LL+ G+++ AVK L+ + G + +F E +++ H N++ LL
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 588 GCCIE-QGEKILIYEYMVNKSLDVFL----FDPTKKHLLGWQLRV-RIIDGIAQ------ 635
G C+ +G +++ YM + L F+ +PT K L+G+ L+V + + +A
Sbjct: 99 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHR 158
Query: 636 ---------DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPE--YALEGV---- 680
D+ K++DFG+AR D L + G P ALE +
Sbjct: 159 DLAARNCMLDEKFTVKVADFGLAR----DMLDKEFDSVHNKTGAKLPVKWMALESLQTQK 214
Query: 681 FSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVS 740
F+ KSDV+SFGVL+ E+++ + + ++F++ + + + DP+ +
Sbjct: 215 FTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYE---- 269
Query: 741 LPMLVRYINVALLCVQENAEDRPTMSDVVSMIN 773
V L C AE RP+ S++VS I+
Sbjct: 270 ---------VMLKCWHPKAEMRPSFSELVSRIS 293
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 127/269 (47%), Gaps = 42/269 (15%)
Query: 533 LGEGGFGPVYKGRLLN--GQEV--AVKRLSNQSGQG-LKEFKNEMMLIAKLQHRNLVRLL 587
+G G FG VY G LL+ G+++ AVK L+ + G + +F E +++ H N++ LL
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 588 GCCIE-QGEKILIYEYMVNKSLDVFL----FDPTKKHLLGWQLRV-RIIDGIAQ------ 635
G C+ +G +++ YM + L F+ +PT K L+G+ L+V + + +A
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHR 157
Query: 636 ---------DQHMNPKISDFGMARMFGGDELQG--NTKRIVGTYGYMSPEYALEGVFSVK 684
D+ K++DFG+AR E N +M+ E F+ K
Sbjct: 158 DLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTK 217
Query: 685 SDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPML 744
SDV+SFGVL+ E+++ + + ++F++ + + + DP+ +
Sbjct: 218 SDVWSFGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYE-------- 268
Query: 745 VRYINVALLCVQENAEDRPTMSDVVSMIN 773
V L C AE RP+ S++VS I+
Sbjct: 269 -----VMLKCWHPKAEMRPSFSELVSRIS 292
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 137/315 (43%), Gaps = 64/315 (20%)
Query: 522 AATENFSIQSKLGEGGFGPVYKGR---LLNGQ---EVAVKRLSNQSGQGLK-EFKNEMML 574
+ E ++ +LG+G FG VY+G ++ G+ VAVK ++ + + EF NE +
Sbjct: 15 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASV 74
Query: 575 IAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFD-------------PTKKHLL 621
+ ++VRLLG + +++ E M + L +L PT + ++
Sbjct: 75 MKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMI 134
Query: 622 GWQLRVRIIDGIA-----QDQHMN-------------PKISDFGMAR-MFGGDELQGNTK 662
Q+ I DG+A + H N KI DFGM R ++ D + K
Sbjct: 135 --QMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGK 192
Query: 663 RIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEI--LSSKKNTGVYNTDSFNLLGHAWS 720
++ +M+PE +GVF+ SD++SFGV++ EI L+ + G+ N +
Sbjct: 193 GLLPVR-WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGY 251
Query: 721 LCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFNLP 780
L + D E R ++ +C Q N RPT ++V+++ ++L
Sbjct: 252 LDQPDNCPE----------------RVTDLMRMCWQFNPNMRPTFLEIVNLLKDDL---- 291
Query: 781 SPKEPPFTTFTKGKN 795
P P + F +N
Sbjct: 292 HPSFPEVSFFHSEEN 306
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 127/269 (47%), Gaps = 42/269 (15%)
Query: 533 LGEGGFGPVYKGRLLN--GQEV--AVKRLSNQSGQG-LKEFKNEMMLIAKLQHRNLVRLL 587
+G G FG VY G LL+ G+++ AVK L+ + G + +F E +++ H N++ LL
Sbjct: 43 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 102
Query: 588 GCCIE-QGEKILIYEYMVNKSLDVFL----FDPTKKHLLGWQLRV-RIIDGIAQ------ 635
G C+ +G +++ YM + L F+ +PT K L+G+ L+V + + +A
Sbjct: 103 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHR 162
Query: 636 ---------DQHMNPKISDFGMARMFGGDELQG--NTKRIVGTYGYMSPEYALEGVFSVK 684
D+ K++DFG+AR E N +M+ E F+ K
Sbjct: 163 DLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTK 222
Query: 685 SDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPML 744
SDV+SFGVL+ E+++ + + ++F++ + + + DP+ +
Sbjct: 223 SDVWSFGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYE-------- 273
Query: 745 VRYINVALLCVQENAEDRPTMSDVVSMIN 773
V L C AE RP+ S++VS I+
Sbjct: 274 -----VMLKCWHPKAEMRPSFSELVSRIS 297
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 131/314 (41%), Gaps = 62/314 (19%)
Query: 522 AATENFSIQSKLGEGGFGPVYKGR---LLNGQ---EVAVKRLSNQSGQGLK-EFKNEMML 574
+ E ++ +LG+G FG VY+G ++ G+ VAVK ++ + + EF NE +
Sbjct: 14 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASV 73
Query: 575 IAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFD-------------PTKKHLL 621
+ ++VRLLG + +++ E M + L +L PT + ++
Sbjct: 74 MKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMI 133
Query: 622 GWQLRVRIIDGIAQ------------------DQHMNPKISDFGMARMFGGDELQGNTKR 663
Q+ I DG+A KI DFGM R + +
Sbjct: 134 --QMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGK 191
Query: 664 IVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEI--LSSKKNTGVYNTDSFNLLGHAWSL 721
+ +M+PE +GVF+ SD++SFGV++ EI L+ + G+ N + L
Sbjct: 192 GLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYL 251
Query: 722 CKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFNLPS 781
+ D E R ++ +C Q N + RPT ++V+++ ++L
Sbjct: 252 DQPDNCPE----------------RVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL----H 291
Query: 782 PKEPPFTTFTKGKN 795
P P + F +N
Sbjct: 292 PSFPEVSFFHSEEN 305
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 131/314 (41%), Gaps = 62/314 (19%)
Query: 522 AATENFSIQSKLGEGGFGPVYKGR---LLNGQ---EVAVKRLSNQSGQGLK-EFKNEMML 574
+ E ++ +LG+G FG VY+G ++ G+ VAVK ++ + + EF NE +
Sbjct: 11 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASV 70
Query: 575 IAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFD-------------PTKKHLL 621
+ ++VRLLG + +++ E M + L +L PT + ++
Sbjct: 71 MKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMI 130
Query: 622 GWQLRVRIIDGIAQ------------------DQHMNPKISDFGMARMFGGDELQGNTKR 663
Q+ I DG+A KI DFGM R + +
Sbjct: 131 --QMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGK 188
Query: 664 IVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEI--LSSKKNTGVYNTDSFNLLGHAWSL 721
+ +M+PE +GVF+ SD++SFGV++ EI L+ + G+ N + L
Sbjct: 189 GLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYL 248
Query: 722 CKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFNLPS 781
+ D E R ++ +C Q N + RPT ++V+++ ++L
Sbjct: 249 DQPDNCPE----------------RVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL----H 288
Query: 782 PKEPPFTTFTKGKN 795
P P + F +N
Sbjct: 289 PSFPEVSFFHSEEN 302
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 123/274 (44%), Gaps = 56/274 (20%)
Query: 526 NFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
+ +++ KLG G FG VY+G VAVK L + + ++EF E ++ +++H NLV
Sbjct: 12 DITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 70
Query: 585 RLLGCCIEQGEKILIYEYMVNKSL--------------DVFLFDPT----------KKHL 620
+LLG C + +I E+M +L V L+ T KK+
Sbjct: 71 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF 130
Query: 621 LGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGV 680
+ L R + + + H+ K++DFG++R+ GD + + +PE
Sbjct: 131 IHRDLAAR--NCLVGENHL-VKVADFGLSRLMTGDTXTAHAGAKFPI-KWTAPESLAYNK 186
Query: 681 FSVKSDVFSFGVLMLEILSSKKN--TGVYNTDSFNLLGHAWSLCK----NDRAHELMDPV 734
FS+KSDV++FGVL+ EI + + G+ + + LL + + + ++ +ELM
Sbjct: 187 FSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMERPEGCPEKVYELMRA- 245
Query: 735 LQNEVSLPMLVRYINVALLCVQENAEDRPTMSDV 768
C Q N DRP+ +++
Sbjct: 246 -------------------CWQWNPSDRPSFAEI 260
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 127/269 (47%), Gaps = 42/269 (15%)
Query: 533 LGEGGFGPVYKGRLLN--GQEV--AVKRLSNQSGQG-LKEFKNEMMLIAKLQHRNLVRLL 587
+G G FG VY G LL+ G+++ AVK L+ + G + +F E +++ H N++ LL
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 588 GCCIE-QGEKILIYEYMVNKSLDVFL----FDPTKKHLLGWQLRV-RIIDGIAQ------ 635
G C+ +G +++ YM + L F+ +PT K L+G+ L+V + + +A
Sbjct: 99 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHR 158
Query: 636 ---------DQHMNPKISDFGMARMFGGDELQG--NTKRIVGTYGYMSPEYALEGVFSVK 684
D+ K++DFG+AR E N +M+ E F+ K
Sbjct: 159 DLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTK 218
Query: 685 SDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPML 744
SDV+SFGVL+ E+++ + + ++F++ + + + DP+ +
Sbjct: 219 SDVWSFGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYE-------- 269
Query: 745 VRYINVALLCVQENAEDRPTMSDVVSMIN 773
V L C AE RP+ S++VS I+
Sbjct: 270 -----VMLKCWHPKAEMRPSFSELVSRIS 293
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 93/209 (44%), Gaps = 40/209 (19%)
Query: 527 FSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQS----GQGLKEFKNEMMLIAKLQHRN 582
+++ +G GGFG VY+ + G EVAVK + Q ++ + E L A L+H N
Sbjct: 9 LTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPN 67
Query: 583 LVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDP--TKKHLLGWQLRVRIIDGIAQDQHMN 640
++ L G C+++ L+ E+ L+ L L+ W +++ D+ +
Sbjct: 68 IIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHDEAIV 127
Query: 641 P---------------------------KISDFGMARMFGGDELQGNTK-RIVGTYGYMS 672
P KI+DFG+AR E TK G Y +M+
Sbjct: 128 PIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR-----EWHRTTKMSAAGAYAWMA 182
Query: 673 PEYALEGVFSVKSDVFSFGVLMLEILSSK 701
PE +FS SDV+S+GVL+ E+L+ +
Sbjct: 183 PEVIRASMFSKGSDVWSYGVLLWELLTGE 211
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 123/274 (44%), Gaps = 56/274 (20%)
Query: 526 NFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
+ +++ KLG G +G VY+G VAVK L + + ++EF E ++ +++H NLV
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 77
Query: 585 RLLGCCIEQGEKILIYEYMVNKSL--------------DVFLFDPT----------KKHL 620
+LLG C + +I E+M +L V L+ T KK+
Sbjct: 78 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 137
Query: 621 LGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGV 680
+ L R + + + H+ K++DFG++R+ GD + + +PE
Sbjct: 138 IHRDLAAR--NCLVGENHLV-KVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNK 193
Query: 681 FSVKSDVFSFGVLMLEILSSKKN--TGVYNTDSFNLLGHAWSLCK----NDRAHELMDPV 734
FS+KSDV++FGVL+ EI + + G+ + + LL + + + ++ +ELM
Sbjct: 194 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRA- 252
Query: 735 LQNEVSLPMLVRYINVALLCVQENAEDRPTMSDV 768
C Q N DRP+ +++
Sbjct: 253 -------------------CWQWNPSDRPSFAEI 267
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 105/233 (45%), Gaps = 48/233 (20%)
Query: 513 PLFSFASVTAAT--------ENFSIQSKLGEGGFGPVYKGRL------LNGQEVAVKRLS 558
P + FA T++ +N ++ LG G FG VY+G++ + +VAVK L
Sbjct: 28 PNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP 87
Query: 559 NQ-SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFD--- 614
S Q +F E ++I+K H+N+VR +G ++ + ++ E M L FL +
Sbjct: 88 EVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRP 147
Query: 615 -PTKKHLLGWQLRVRIIDGIA------QDQHM---------------NP----KISDFGM 648
P++ L + + IA ++ H P KI DFGM
Sbjct: 148 RPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM 207
Query: 649 ARMF--GGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS 699
AR G +G + +M PE +EG+F+ K+D +SFGVL+ EI S
Sbjct: 208 ARDIYRAGYYRKGGCAML--PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 123/274 (44%), Gaps = 56/274 (20%)
Query: 526 NFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
+ +++ KLG G +G VY+G VAVK L + + ++EF E ++ +++H NLV
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 72
Query: 585 RLLGCCIEQGEKILIYEYMVNKSL--------------DVFLFDPT----------KKHL 620
+LLG C + +I E+M +L V L+ T KK+
Sbjct: 73 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 132
Query: 621 LGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGV 680
+ L R + + + H+ K++DFG++R+ GD + + +PE
Sbjct: 133 IHRDLAAR--NCLVGENHL-VKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNK 188
Query: 681 FSVKSDVFSFGVLMLEILSSKKN--TGVYNTDSFNLLGHAWSLCK----NDRAHELMDPV 734
FS+KSDV++FGVL+ EI + + G+ + + LL + + + ++ +ELM
Sbjct: 189 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRA- 247
Query: 735 LQNEVSLPMLVRYINVALLCVQENAEDRPTMSDV 768
C Q N DRP+ +++
Sbjct: 248 -------------------CWQWNPSDRPSFAEI 262
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 130/269 (48%), Gaps = 42/269 (15%)
Query: 533 LGEGGFGPVYKGRLLN--GQEV--AVKRLSNQSGQG-LKEFKNEMMLIAKLQHRNLVRLL 587
+G G FG VY G LL+ G+++ AVK L+ + G + +F E +++ H N++ LL
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 588 GCCIE-QGEKILIYEYMVNKSLDVFL----FDPTKKHLLGWQLRV-RIIDGIAQ------ 635
G C+ +G +++ YM + L F+ +PT K L+G+ L+V + + +A
Sbjct: 97 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR 156
Query: 636 ---------DQHMNPKISDFGMAR-MFGGDELQGNTKRIVGT-YGYMSPEYALEGVFSVK 684
D+ K++DFG+AR M+ + + K +M+ E F+ K
Sbjct: 157 DLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQKFTTK 216
Query: 685 SDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPML 744
SDV+SFGVL+ E+++ + + ++F++ + + + DP+ +
Sbjct: 217 SDVWSFGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYE-------- 267
Query: 745 VRYINVALLCVQENAEDRPTMSDVVSMIN 773
V L C AE RP+ S++VS I+
Sbjct: 268 -----VMLKCWHPKAEMRPSFSELVSRIS 291
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 123/274 (44%), Gaps = 56/274 (20%)
Query: 526 NFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
+ +++ KLG G +G VY+G VAVK L + + ++EF E ++ +++H NLV
Sbjct: 12 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 70
Query: 585 RLLGCCIEQGEKILIYEYMVNKSL--------------DVFLFDPT----------KKHL 620
+LLG C + +I E+M +L V L+ T KK+
Sbjct: 71 QLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF 130
Query: 621 LGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGV 680
+ L R + + + H+ K++DFG++R+ GD + + +PE
Sbjct: 131 IHRDLAAR--NCLVGENHL-VKVADFGLSRLMTGDTXTAHAGAKFPI-KWTAPESLAYNK 186
Query: 681 FSVKSDVFSFGVLMLEILSSKKN--TGVYNTDSFNLLGHAWSLCK----NDRAHELMDPV 734
FS+KSDV++FGVL+ EI + + G+ + + LL + + + ++ +ELM
Sbjct: 187 FSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMERPEGCPEKVYELMRA- 245
Query: 735 LQNEVSLPMLVRYINVALLCVQENAEDRPTMSDV 768
C Q N DRP+ +++
Sbjct: 246 -------------------CWQWNPSDRPSFAEI 260
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 123/274 (44%), Gaps = 56/274 (20%)
Query: 526 NFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
+ +++ KLG G +G VY+G VAVK L + + ++EF E ++ +++H NLV
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 72
Query: 585 RLLGCCIEQGEKILIYEYMVNKSL--------------DVFLFDPT----------KKHL 620
+LLG C + +I E+M +L V L+ T KK+
Sbjct: 73 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 132
Query: 621 LGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGV 680
+ L R + + + H+ K++DFG++R+ GD + + +PE
Sbjct: 133 IHRDLAAR--NCLVGENHL-VKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNK 188
Query: 681 FSVKSDVFSFGVLMLEILSSKKN--TGVYNTDSFNLLGHAWSLCK----NDRAHELMDPV 734
FS+KSDV++FGVL+ EI + + G+ + + LL + + + ++ +ELM
Sbjct: 189 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRA- 247
Query: 735 LQNEVSLPMLVRYINVALLCVQENAEDRPTMSDV 768
C Q N DRP+ +++
Sbjct: 248 -------------------CWQWNPSDRPSFAEI 262
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 121/268 (45%), Gaps = 44/268 (16%)
Query: 526 NFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
+ +++ KLG G +G VY+G VAVK L + + ++EF E ++ +++H NLV
Sbjct: 221 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 279
Query: 585 RLLGCCIEQGEKILIYEYMVNKSL--------------DVFLFDPT----------KKHL 620
+LLG C + +I E+M +L V L+ T KK+
Sbjct: 280 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF 339
Query: 621 LGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGV 680
+ L R + + + H+ K++DFG++R+ GD + + +PE
Sbjct: 340 IHRNLAAR--NCLVGENHL-VKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNK 395
Query: 681 FSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVS 740
FS+KSDV++FGVL+ EI + G+ +L + +EL++ + E
Sbjct: 396 FSIKSDVWAFGVLLWEIAT----YGMSPYPGIDL----------SQVYELLEKDYRMERP 441
Query: 741 LPMLVRYINVALLCVQENAEDRPTMSDV 768
+ + C Q N DRP+ +++
Sbjct: 442 EGCPEKVYELMRACWQWNPSDRPSFAEI 469
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 130/314 (41%), Gaps = 62/314 (19%)
Query: 522 AATENFSIQSKLGEGGFGPVYKGR---LLNGQ---EVAVKRLSNQSGQGLK-EFKNEMML 574
+ E ++ +LG+G FG VY+G ++ G+ VAVK ++ + + EF NE +
Sbjct: 14 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASV 73
Query: 575 IAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFD-------------PTKKHLL 621
+ ++VRLLG + +++ E M + L +L PT + ++
Sbjct: 74 MKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMI 133
Query: 622 GWQLRVRIIDGIAQ------------------DQHMNPKISDFGMARMFGGDELQGNTKR 663
Q+ I DG+A KI DFGM R + +
Sbjct: 134 --QMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGK 191
Query: 664 IVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEI--LSSKKNTGVYNTDSFNLLGHAWSL 721
+ +M+PE +GVF+ SD++SFGV++ EI L+ + G+ N + L
Sbjct: 192 GLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYL 251
Query: 722 CKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFNLPS 781
+ D E R ++ +C Q N RPT ++V+++ ++L
Sbjct: 252 DQPDNCPE----------------RVTDLMRMCWQFNPNMRPTFLEIVNLLKDDL----H 291
Query: 782 PKEPPFTTFTKGKN 795
P P + F +N
Sbjct: 292 PSFPEVSFFHSEEN 305
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 130/269 (48%), Gaps = 42/269 (15%)
Query: 533 LGEGGFGPVYKGRLLN--GQEV--AVKRLSNQSGQG-LKEFKNEMMLIAKLQHRNLVRLL 587
+G G FG VY G LL+ G+++ AVK L+ + G + +F E +++ H N++ LL
Sbjct: 30 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 89
Query: 588 GCCIE-QGEKILIYEYMVNKSLDVFL----FDPTKKHLLGWQLRV-RIIDGIAQ------ 635
G C+ +G +++ YM + L F+ +PT K L+G+ L+V + + +A
Sbjct: 90 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR 149
Query: 636 ---------DQHMNPKISDFGMAR-MFGGDELQGNTKRIVGT-YGYMSPEYALEGVFSVK 684
D+ K++DFG+AR M+ + + K +M+ E F+ K
Sbjct: 150 DLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTK 209
Query: 685 SDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPML 744
SDV+SFGVL+ E+++ + + ++F++ + + + DP+ +
Sbjct: 210 SDVWSFGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYE-------- 260
Query: 745 VRYINVALLCVQENAEDRPTMSDVVSMIN 773
V L C AE RP+ S++VS I+
Sbjct: 261 -----VMLKCWHPKAEMRPSFSELVSRIS 284
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 123/274 (44%), Gaps = 56/274 (20%)
Query: 526 NFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
+ +++ KLG G +G VY+G VAVK L + + ++EF E ++ +++H NLV
Sbjct: 18 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 76
Query: 585 RLLGCCIEQGEKILIYEYMVNKSL--------------DVFLFDPT----------KKHL 620
+LLG C + +I E+M +L V L+ T KK+
Sbjct: 77 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 136
Query: 621 LGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGV 680
+ L R + + + H+ K++DFG++R+ GD + + +PE
Sbjct: 137 IHRDLAAR--NCLVGENHLV-KVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNK 192
Query: 681 FSVKSDVFSFGVLMLEILSSKKN--TGVYNTDSFNLLGHAWSLCK----NDRAHELMDPV 734
FS+KSDV++FGVL+ EI + + G+ + + LL + + + ++ +ELM
Sbjct: 193 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRA- 251
Query: 735 LQNEVSLPMLVRYINVALLCVQENAEDRPTMSDV 768
C Q N DRP+ +++
Sbjct: 252 -------------------CWQWNPSDRPSFAEI 266
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 130/269 (48%), Gaps = 42/269 (15%)
Query: 533 LGEGGFGPVYKGRLLN--GQEV--AVKRLSNQSGQG-LKEFKNEMMLIAKLQHRNLVRLL 587
+G G FG VY G LL+ G+++ AVK L+ + G + +F E +++ H N++ LL
Sbjct: 57 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 116
Query: 588 GCCIE-QGEKILIYEYMVNKSLDVFL----FDPTKKHLLGWQLRV-RIIDGIAQ------ 635
G C+ +G +++ YM + L F+ +PT K L+G+ L+V + + +A
Sbjct: 117 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR 176
Query: 636 ---------DQHMNPKISDFGMAR-MFGGDELQGNTKRIVGT-YGYMSPEYALEGVFSVK 684
D+ K++DFG+AR M+ + + K +M+ E F+ K
Sbjct: 177 DLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTK 236
Query: 685 SDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPML 744
SDV+SFGVL+ E+++ + + ++F++ + + + DP+ +
Sbjct: 237 SDVWSFGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYE-------- 287
Query: 745 VRYINVALLCVQENAEDRPTMSDVVSMIN 773
V L C AE RP+ S++VS I+
Sbjct: 288 -----VMLKCWHPKAEMRPSFSELVSRIS 311
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 123/274 (44%), Gaps = 56/274 (20%)
Query: 526 NFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
+ +++ KLG G +G VY+G VAVK L + + ++EF E ++ +++H NLV
Sbjct: 12 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 70
Query: 585 RLLGCCIEQGEKILIYEYMVNKSL--------------DVFLFDPT----------KKHL 620
+LLG C + +I E+M +L V L+ T KK+
Sbjct: 71 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF 130
Query: 621 LGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGV 680
+ L R + + + H+ K++DFG++R+ GD + + +PE
Sbjct: 131 IHRDLAAR--NCLVGENHL-VKVADFGLSRLMTGDTFTAHAGAKFPI-KWTAPESLAYNK 186
Query: 681 FSVKSDVFSFGVLMLEILSSKKN--TGVYNTDSFNLLGHAWSLCK----NDRAHELMDPV 734
FS+KSDV++FGVL+ EI + + G+ + + LL + + + ++ +ELM
Sbjct: 187 FSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMERPEGCPEKVYELMRA- 245
Query: 735 LQNEVSLPMLVRYINVALLCVQENAEDRPTMSDV 768
C Q N DRP+ +++
Sbjct: 246 -------------------CWQWNPSDRPSFAEI 260
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 123/274 (44%), Gaps = 56/274 (20%)
Query: 526 NFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
+ +++ KLG G +G VY+G VAVK L + + ++EF E ++ +++H NLV
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 77
Query: 585 RLLGCCIEQGEKILIYEYMVNKSL--------------DVFLFDPT----------KKHL 620
+LLG C + +I E+M +L V L+ T KK+
Sbjct: 78 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 137
Query: 621 LGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGV 680
+ L R + + + H+ K++DFG++R+ GD + + +PE
Sbjct: 138 IHRDLAAR--NCLVGENHLV-KVADFGLSRLMTGDTXTAHAGAKFPI-KWTAPESLAYNK 193
Query: 681 FSVKSDVFSFGVLMLEILSSKKN--TGVYNTDSFNLLGHAWSLCK----NDRAHELMDPV 734
FS+KSDV++FGVL+ EI + + G+ + + LL + + + ++ +ELM
Sbjct: 194 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRA- 252
Query: 735 LQNEVSLPMLVRYINVALLCVQENAEDRPTMSDV 768
C Q N DRP+ +++
Sbjct: 253 -------------------CWQWNPSDRPSFAEI 267
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 130/269 (48%), Gaps = 42/269 (15%)
Query: 533 LGEGGFGPVYKGRLLN--GQEV--AVKRLSNQSGQG-LKEFKNEMMLIAKLQHRNLVRLL 587
+G G FG VY G LL+ G+++ AVK L+ + G + +F E +++ H N++ LL
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 588 GCCIE-QGEKILIYEYMVNKSLDVFL----FDPTKKHLLGWQLRV-RIIDGIAQ------ 635
G C+ +G +++ YM + L F+ +PT K L+G+ L+V + + +A
Sbjct: 97 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR 156
Query: 636 ---------DQHMNPKISDFGMAR-MFGGDELQGNTKRIVGT-YGYMSPEYALEGVFSVK 684
D+ K++DFG+AR M+ + + K +M+ E F+ K
Sbjct: 157 DLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTK 216
Query: 685 SDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPML 744
SDV+SFGVL+ E+++ + + ++F++ + + + DP+ +
Sbjct: 217 SDVWSFGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYE-------- 267
Query: 745 VRYINVALLCVQENAEDRPTMSDVVSMIN 773
V L C AE RP+ S++VS I+
Sbjct: 268 -----VMLKCWHPKAEMRPSFSELVSRIS 291
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 130/269 (48%), Gaps = 42/269 (15%)
Query: 533 LGEGGFGPVYKGRLLN--GQEV--AVKRLSNQSGQG-LKEFKNEMMLIAKLQHRNLVRLL 587
+G G FG VY G LL+ G+++ AVK L+ + G + +F E +++ H N++ LL
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 588 GCCIE-QGEKILIYEYMVNKSLDVFL----FDPTKKHLLGWQLRV-RIIDGIAQ------ 635
G C+ +G +++ YM + L F+ +PT K L+G+ L+V + + +A
Sbjct: 96 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR 155
Query: 636 ---------DQHMNPKISDFGMAR-MFGGDELQGNTKRIVGT-YGYMSPEYALEGVFSVK 684
D+ K++DFG+AR M+ + + K +M+ E F+ K
Sbjct: 156 DLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTK 215
Query: 685 SDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPML 744
SDV+SFGVL+ E+++ + + ++F++ + + + DP+ +
Sbjct: 216 SDVWSFGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYE-------- 266
Query: 745 VRYINVALLCVQENAEDRPTMSDVVSMIN 773
V L C AE RP+ S++VS I+
Sbjct: 267 -----VMLKCWHPKAEMRPSFSELVSRIS 290
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 130/269 (48%), Gaps = 42/269 (15%)
Query: 533 LGEGGFGPVYKGRLLN--GQEV--AVKRLSNQSGQG-LKEFKNEMMLIAKLQHRNLVRLL 587
+G G FG VY G LL+ G+++ AVK L+ + G + +F E +++ H N++ LL
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 588 GCCIE-QGEKILIYEYMVNKSLDVFL----FDPTKKHLLGWQLRV-RIIDGIAQ------ 635
G C+ +G +++ YM + L F+ +PT K L+G+ L+V + + +A
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR 157
Query: 636 ---------DQHMNPKISDFGMAR-MFGGDELQGNTKRIVGT-YGYMSPEYALEGVFSVK 684
D+ K++DFG+AR M+ + + K +M+ E F+ K
Sbjct: 158 DLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTK 217
Query: 685 SDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPML 744
SDV+SFGVL+ E+++ + + ++F++ + + + DP+ +
Sbjct: 218 SDVWSFGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYE-------- 268
Query: 745 VRYINVALLCVQENAEDRPTMSDVVSMIN 773
V L C AE RP+ S++VS I+
Sbjct: 269 -----VMLKCWHPKAEMRPSFSELVSRIS 292
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 130/269 (48%), Gaps = 42/269 (15%)
Query: 533 LGEGGFGPVYKGRLLN--GQEV--AVKRLSNQSGQG-LKEFKNEMMLIAKLQHRNLVRLL 587
+G G FG VY G LL+ G+++ AVK L+ + G + +F E +++ H N++ LL
Sbjct: 33 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 92
Query: 588 GCCIE-QGEKILIYEYMVNKSLDVFL----FDPTKKHLLGWQLRV-RIIDGIAQ------ 635
G C+ +G +++ YM + L F+ +PT K L+G+ L+V + + +A
Sbjct: 93 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR 152
Query: 636 ---------DQHMNPKISDFGMAR-MFGGDELQGNTKRIVGT-YGYMSPEYALEGVFSVK 684
D+ K++DFG+AR M+ + + K +M+ E F+ K
Sbjct: 153 DLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTK 212
Query: 685 SDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPML 744
SDV+SFGVL+ E+++ + + ++F++ + + + DP+ +
Sbjct: 213 SDVWSFGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYE-------- 263
Query: 745 VRYINVALLCVQENAEDRPTMSDVVSMIN 773
V L C AE RP+ S++VS I+
Sbjct: 264 -----VMLKCWHPKAEMRPSFSELVSRIS 287
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 130/269 (48%), Gaps = 42/269 (15%)
Query: 533 LGEGGFGPVYKGRLLN--GQEV--AVKRLSNQSGQG-LKEFKNEMMLIAKLQHRNLVRLL 587
+G G FG VY G LL+ G+++ AVK L+ + G + +F E +++ H N++ LL
Sbjct: 56 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 115
Query: 588 GCCIE-QGEKILIYEYMVNKSLDVFL----FDPTKKHLLGWQLRV-RIIDGIAQ------ 635
G C+ +G +++ YM + L F+ +PT K L+G+ L+V + + +A
Sbjct: 116 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR 175
Query: 636 ---------DQHMNPKISDFGMAR-MFGGDELQGNTKRIVGT-YGYMSPEYALEGVFSVK 684
D+ K++DFG+AR M+ + + K +M+ E F+ K
Sbjct: 176 DLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTK 235
Query: 685 SDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPML 744
SDV+SFGVL+ E+++ + + ++F++ + + + DP+ +
Sbjct: 236 SDVWSFGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYE-------- 286
Query: 745 VRYINVALLCVQENAEDRPTMSDVVSMIN 773
V L C AE RP+ S++VS I+
Sbjct: 287 -----VMLKCWHPKAEMRPSFSELVSRIS 310
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 135/314 (42%), Gaps = 64/314 (20%)
Query: 523 ATENFSIQSKLGEGGFGPVYKGR---LLNGQ---EVAVKRLSNQSGQGLK-EFKNEMMLI 575
+ E ++ +LG+G FG VY+G ++ G+ VAVK ++ + + EF NE ++
Sbjct: 14 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVM 73
Query: 576 AKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFD-------------PTKKHLLG 622
++VRLLG + +++ E M + L +L PT + ++
Sbjct: 74 KGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMI- 132
Query: 623 WQLRVRIIDGIAQ------------------DQHMNPKISDFGMAR-MFGGDELQGNTKR 663
Q+ I DG+A KI DFGM R ++ D + K
Sbjct: 133 -QMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKG 191
Query: 664 IVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEI--LSSKKNTGVYNTDSFNLLGHAWSL 721
++ +M+PE +GVF+ SD++SFGV++ EI L+ + G+ N + L
Sbjct: 192 LLPVR-WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYL 250
Query: 722 CKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFNLPS 781
+ D E R ++ +C Q N + RPT ++V+++ ++L
Sbjct: 251 DQPDNCPE----------------RVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL----H 290
Query: 782 PKEPPFTTFTKGKN 795
P P + F +N
Sbjct: 291 PSFPEVSFFHSEEN 304
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 130/269 (48%), Gaps = 42/269 (15%)
Query: 533 LGEGGFGPVYKGRLLN--GQEV--AVKRLSNQSGQG-LKEFKNEMMLIAKLQHRNLVRLL 587
+G G FG VY G LL+ G+++ AVK L+ + G + +F E +++ H N++ LL
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 588 GCCIE-QGEKILIYEYMVNKSLDVFL----FDPTKKHLLGWQLRV-RIIDGIAQ------ 635
G C+ +G +++ YM + L F+ +PT K L+G+ L+V + + +A
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR 157
Query: 636 ---------DQHMNPKISDFGMAR-MFGGDELQGNTKRIVGT-YGYMSPEYALEGVFSVK 684
D+ K++DFG+AR M+ + + K +M+ E F+ K
Sbjct: 158 DLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTK 217
Query: 685 SDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPML 744
SDV+SFGVL+ E+++ + + ++F++ + + + DP+ +
Sbjct: 218 SDVWSFGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYE-------- 268
Query: 745 VRYINVALLCVQENAEDRPTMSDVVSMIN 773
V L C AE RP+ S++VS I+
Sbjct: 269 -----VMLKCWHPKAEMRPSFSELVSRIS 292
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 123/274 (44%), Gaps = 56/274 (20%)
Query: 526 NFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
+ +++ KLG G +G VY+G VAVK L + + ++EF E ++ +++H NLV
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 72
Query: 585 RLLGCCIEQGEKILIYEYMVNKSL--------------DVFLFDPT----------KKHL 620
+LLG C + +I E+M +L V L+ T KK+
Sbjct: 73 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF 132
Query: 621 LGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGV 680
+ L R + + + H+ K++DFG++R+ GD + + +PE
Sbjct: 133 IHRDLAAR--NCLVGENHL-VKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNK 188
Query: 681 FSVKSDVFSFGVLMLEILSSKKN--TGVYNTDSFNLLGHAWSLCK----NDRAHELMDPV 734
FS+KSDV++FGVL+ EI + + G+ + + LL + + + ++ +ELM
Sbjct: 189 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRA- 247
Query: 735 LQNEVSLPMLVRYINVALLCVQENAEDRPTMSDV 768
C Q N DRP+ +++
Sbjct: 248 -------------------CWQWNPSDRPSFAEI 262
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 130/269 (48%), Gaps = 42/269 (15%)
Query: 533 LGEGGFGPVYKGRLLN--GQEV--AVKRLSNQSGQG-LKEFKNEMMLIAKLQHRNLVRLL 587
+G G FG VY G LL+ G+++ AVK L+ + G + +F E +++ H N++ LL
Sbjct: 35 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 94
Query: 588 GCCIE-QGEKILIYEYMVNKSLDVFL----FDPTKKHLLGWQLRV-RIIDGIAQ------ 635
G C+ +G +++ YM + L F+ +PT K L+G+ L+V + + +A
Sbjct: 95 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR 154
Query: 636 ---------DQHMNPKISDFGMAR-MFGGDELQGNTKRIVGT-YGYMSPEYALEGVFSVK 684
D+ K++DFG+AR M+ + + K +M+ E F+ K
Sbjct: 155 DLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTK 214
Query: 685 SDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPML 744
SDV+SFGVL+ E+++ + + ++F++ + + + DP+ +
Sbjct: 215 SDVWSFGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYE-------- 265
Query: 745 VRYINVALLCVQENAEDRPTMSDVVSMIN 773
V L C AE RP+ S++VS I+
Sbjct: 266 -----VMLKCWHPKAEMRPSFSELVSRIS 289
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 123/274 (44%), Gaps = 56/274 (20%)
Query: 526 NFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
+ +++ KLG G +G VY+G VAVK L + + ++EF E ++ +++H NLV
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 72
Query: 585 RLLGCCIEQGEKILIYEYMVNKSL--------------DVFLFDPT----------KKHL 620
+LLG C + +I E+M +L V L+ T KK+
Sbjct: 73 QLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF 132
Query: 621 LGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGV 680
+ L R + + + H+ K++DFG++R+ GD + + +PE
Sbjct: 133 IHRDLAAR--NCLVGENHL-VKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNK 188
Query: 681 FSVKSDVFSFGVLMLEILSSKKN--TGVYNTDSFNLLGHAWSLCK----NDRAHELMDPV 734
FS+KSDV++FGVL+ EI + + G+ + + LL + + + ++ +ELM
Sbjct: 189 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRA- 247
Query: 735 LQNEVSLPMLVRYINVALLCVQENAEDRPTMSDV 768
C Q N DRP+ +++
Sbjct: 248 -------------------CWQWNPSDRPSFAEI 262
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 123/274 (44%), Gaps = 56/274 (20%)
Query: 526 NFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
+ +++ KLG G +G VY+G VAVK L + + ++EF E ++ +++H NLV
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 72
Query: 585 RLLGCCIEQGEKILIYEYMVNKSL--------------DVFLFDPT----------KKHL 620
+LLG C + +I E+M +L V L+ T KK+
Sbjct: 73 QLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF 132
Query: 621 LGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGV 680
+ L R + + + H+ K++DFG++R+ GD + + +PE
Sbjct: 133 IHRDLAAR--NCLVGENHL-VKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNK 188
Query: 681 FSVKSDVFSFGVLMLEILSSKKN--TGVYNTDSFNLLGHAWSLCK----NDRAHELMDPV 734
FS+KSDV++FGVL+ EI + + G+ + + LL + + + ++ +ELM
Sbjct: 189 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRA- 247
Query: 735 LQNEVSLPMLVRYINVALLCVQENAEDRPTMSDV 768
C Q N DRP+ +++
Sbjct: 248 -------------------CWQWNPSDRPSFAEI 262
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 130/296 (43%), Gaps = 41/296 (13%)
Query: 514 LFSFASVTAATENFSIQSKLGEGGFGPVYKGRL-LNGQE---VAVKRLS-NQSGQGLKEF 568
+ FA AT N SI +G G FG V GRL L ++ VA+K L + + ++F
Sbjct: 35 VHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 569 KNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFL---------------- 612
E ++ + H N++RL G + +++ EYM N SLD FL
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML 153
Query: 613 --FDPTKKHL--LGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGT- 667
K+L +G+ R I + ++ K+SDFG+AR+ D T R
Sbjct: 154 RGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIP 213
Query: 668 YGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRA 727
+ SPE F+ SDV+S+G+++ E++S Y + + + + D
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS-------YGERPYWEMSNQDVIKAVDEG 266
Query: 728 HELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFNLPSPK 783
+ L P + +L L+ L C Q++ +RP +VS+++ + N S K
Sbjct: 267 YRL-PPPMDCPAALYQLM------LDCWQKDRNNRPKFEQIVSILDKLIRNPGSLK 315
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 98/223 (43%), Gaps = 50/223 (22%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLN---GQE---VAVKRLSNQSGQGLKEFKNEMMLIAKL 578
N ++ +LGEG FG V+ N Q+ VAVK L + S K+F E L+ L
Sbjct: 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNL 72
Query: 579 QHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFL----------------FDPTKKHLLG 622
QH ++V+ G C+E I+++EYM + L+ FL + T+ +L
Sbjct: 73 QHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQML- 131
Query: 623 WQLRVRIIDGIA--QDQH----------------MNPKISDFGMARMFGGDELQGNTKRI 664
+ +I G+ QH + KI DFGM+R D + R+
Sbjct: 132 -HIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSR----DVYSTDYYRV 186
Query: 665 VG----TYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKN 703
G +M PE + F+ +SDV+S GV++ EI + K
Sbjct: 187 GGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQ 229
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 121/268 (45%), Gaps = 44/268 (16%)
Query: 526 NFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
+ +++ KLG G +G VY+G VAVK L + + ++EF E ++ +++H NLV
Sbjct: 260 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 318
Query: 585 RLLGCCIEQGEKILIYEYMVNKSL--------------DVFLFDPT----------KKHL 620
+LLG C + +I E+M +L V L+ T KK+
Sbjct: 319 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 378
Query: 621 LGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGV 680
+ L R + + + H+ K++DFG++R+ GD + + +PE
Sbjct: 379 IHRNLAAR--NCLVGENHL-VKVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYNK 434
Query: 681 FSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVS 740
FS+KSDV++FGVL+ EI + G+ +L + +EL++ + E
Sbjct: 435 FSIKSDVWAFGVLLWEIAT----YGMSPYPGIDL----------SQVYELLEKDYRMERP 480
Query: 741 LPMLVRYINVALLCVQENAEDRPTMSDV 768
+ + C Q N DRP+ +++
Sbjct: 481 EGCPEKVYELMRACWQWNPSDRPSFAEI 508
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 123/274 (44%), Gaps = 56/274 (20%)
Query: 526 NFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
+ +++ KLG G +G VY+G VAVK L + + ++EF E ++ +++H NLV
Sbjct: 15 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 73
Query: 585 RLLGCCIEQGEKILIYEYMVNKSL--------------DVFLFDPT----------KKHL 620
+LLG C + +I E+M +L V L+ T KK+
Sbjct: 74 QLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 133
Query: 621 LGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGV 680
+ L R + + + H+ K++DFG++R+ GD + + +PE
Sbjct: 134 IHRDLAAR--NCLVGENHL-VKVADFGLSRLMTGDTXTAHAGAKFPI-KWTAPESLAYNK 189
Query: 681 FSVKSDVFSFGVLMLEILSSKKN--TGVYNTDSFNLLGHAWSLCK----NDRAHELMDPV 734
FS+KSDV++FGVL+ EI + + G+ + + LL + + + ++ +ELM
Sbjct: 190 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRA- 248
Query: 735 LQNEVSLPMLVRYINVALLCVQENAEDRPTMSDV 768
C Q N DRP+ +++
Sbjct: 249 -------------------CWQWNPSDRPSFAEI 263
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 123/274 (44%), Gaps = 56/274 (20%)
Query: 526 NFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
+ +++ KLG G +G VY+G VAVK L + + ++EF E ++ +++H NLV
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 77
Query: 585 RLLGCCIEQGEKILIYEYMVNKSL--------------DVFLFDPT----------KKHL 620
+LLG C + +I E+M +L V L+ T KK+
Sbjct: 78 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF 137
Query: 621 LGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGV 680
+ L R + + + H+ K++DFG++R+ GD + + +PE
Sbjct: 138 IHRDLAAR--NCLVGENHL-VKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNK 193
Query: 681 FSVKSDVFSFGVLMLEILSSKKN--TGVYNTDSFNLLGHAWSLCK----NDRAHELMDPV 734
FS+KSDV++FGVL+ EI + + G+ + + LL + + + ++ +ELM
Sbjct: 194 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRA- 252
Query: 735 LQNEVSLPMLVRYINVALLCVQENAEDRPTMSDV 768
C Q N DRP+ +++
Sbjct: 253 -------------------CWQWNPSDRPSFAEI 267
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 128/295 (43%), Gaps = 60/295 (20%)
Query: 523 ATENFSIQSKLGEGGFGPVY----KGRLLNGQE--VAVKRLSNQSGQGLK-EFKNEMMLI 575
A E ++ +LG+G FG VY KG + + E VA+K ++ + + EF NE ++
Sbjct: 23 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 82
Query: 576 AKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFD-------------PTKKHLLG 622
+ ++VRLLG + ++I E M L +L P+ ++
Sbjct: 83 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMI- 141
Query: 623 WQLRVRIIDGIAQ------------------DQHMNPKISDFGMAR-MFGGDELQGNTKR 663
Q+ I DG+A + KI DFGM R ++ D + K
Sbjct: 142 -QMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKG 200
Query: 664 IVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEI--LSSKKNTGVYNTDSFNLLGHAWSL 721
++ +MSPE +GVF+ SDV+SFGV++ EI L+ + G+ N + L
Sbjct: 201 LLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLL 259
Query: 722 CKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNEL 776
K D +++ +++ +C Q N + RP+ +++S I E+
Sbjct: 260 DKPDNCPDMLFELMR----------------MCWQYNPKMRPSFLEIISSIKEEM 298
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 123/274 (44%), Gaps = 56/274 (20%)
Query: 526 NFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
+ +++ KLG G +G VY+G VAVK L + + ++EF E ++ +++H NLV
Sbjct: 16 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 74
Query: 585 RLLGCCIEQGEKILIYEYMVNKSL--------------DVFLFDPT----------KKHL 620
+LLG C + +I E+M +L V L+ T KK+
Sbjct: 75 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 134
Query: 621 LGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGV 680
+ L R + + + H+ K++DFG++R+ GD + + +PE
Sbjct: 135 IHRDLAAR--NCLVGENHL-VKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNK 190
Query: 681 FSVKSDVFSFGVLMLEILSSKKN--TGVYNTDSFNLLGHAWSLCK----NDRAHELMDPV 734
FS+KSDV++FGVL+ EI + + G+ + + LL + + + ++ +ELM
Sbjct: 191 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRA- 249
Query: 735 LQNEVSLPMLVRYINVALLCVQENAEDRPTMSDV 768
C Q N DRP+ +++
Sbjct: 250 -------------------CWQWNPSDRPSFAEI 264
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 123/274 (44%), Gaps = 56/274 (20%)
Query: 526 NFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
+ +++ KLG G +G VY+G VAVK L + + ++EF E ++ +++H NLV
Sbjct: 16 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 74
Query: 585 RLLGCCIEQGEKILIYEYMVNKSL--------------DVFLFDPT----------KKHL 620
+LLG C + +I E+M +L V L+ T KK+
Sbjct: 75 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 134
Query: 621 LGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGV 680
+ L R + + + H+ K++DFG++R+ GD + + +PE
Sbjct: 135 IHRDLAAR--NCLVGENHL-VKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNK 190
Query: 681 FSVKSDVFSFGVLMLEILSSKKN--TGVYNTDSFNLLGHAWSLCK----NDRAHELMDPV 734
FS+KSDV++FGVL+ EI + + G+ + + LL + + + ++ +ELM
Sbjct: 191 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRA- 249
Query: 735 LQNEVSLPMLVRYINVALLCVQENAEDRPTMSDV 768
C Q N DRP+ +++
Sbjct: 250 -------------------CWQWNPSDRPSFAEI 264
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 121/268 (45%), Gaps = 44/268 (16%)
Query: 526 NFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
+ +++ KLG G +G VY+G VAVK L + + ++EF E ++ +++H NLV
Sbjct: 218 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 276
Query: 585 RLLGCCIEQGEKILIYEYMVNKSL--------------DVFLFDPT----------KKHL 620
+LLG C + +I E+M +L V L+ T KK+
Sbjct: 277 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 336
Query: 621 LGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGV 680
+ L R + + + H+ K++DFG++R+ GD + + +PE
Sbjct: 337 IHRNLAAR--NCLVGENHL-VKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNK 392
Query: 681 FSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVS 740
FS+KSDV++FGVL+ EI + G+ +L + +EL++ + E
Sbjct: 393 FSIKSDVWAFGVLLWEIAT----YGMSPYPGIDL----------SQVYELLEKDYRMERP 438
Query: 741 LPMLVRYINVALLCVQENAEDRPTMSDV 768
+ + C Q N DRP+ +++
Sbjct: 439 EGCPEKVYELMRACWQWNPSDRPSFAEI 466
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 123/274 (44%), Gaps = 56/274 (20%)
Query: 526 NFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
+ +++ KLG G +G VY+G VAVK L + + ++EF E ++ +++H NLV
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 77
Query: 585 RLLGCCIEQGEKILIYEYMVNKSL--------------DVFLFDPT----------KKHL 620
+LLG C + +I E+M +L V L+ T KK+
Sbjct: 78 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 137
Query: 621 LGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGV 680
+ L R + + + H+ K++DFG++R+ GD + + +PE
Sbjct: 138 IHRDLAAR--NCLVGENHL-VKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNK 193
Query: 681 FSVKSDVFSFGVLMLEILSSKKN--TGVYNTDSFNLLGHAWSLCK----NDRAHELMDPV 734
FS+KSDV++FGVL+ EI + + G+ + + LL + + + ++ +ELM
Sbjct: 194 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRA- 252
Query: 735 LQNEVSLPMLVRYINVALLCVQENAEDRPTMSDV 768
C Q N DRP+ +++
Sbjct: 253 -------------------CWQWNPSDRPSFAEI 267
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 123/274 (44%), Gaps = 56/274 (20%)
Query: 526 NFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
+ +++ KLG G +G VY+G VAVK L + + ++EF E ++ +++H NLV
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 72
Query: 585 RLLGCCIEQGEKILIYEYMVNKSL--------------DVFLFDPT----------KKHL 620
+LLG C + +I E+M +L V L+ T KK+
Sbjct: 73 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF 132
Query: 621 LGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGV 680
+ L R + + + H+ K++DFG++R+ GD + + +PE
Sbjct: 133 IHRDLAAR--NCLVGENHL-VKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNK 188
Query: 681 FSVKSDVFSFGVLMLEILSSKKN--TGVYNTDSFNLLGHAWSLCK----NDRAHELMDPV 734
FS+KSDV++FGVL+ EI + + G+ + + LL + + + ++ +ELM
Sbjct: 189 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRA- 247
Query: 735 LQNEVSLPMLVRYINVALLCVQENAEDRPTMSDV 768
C Q N DRP+ +++
Sbjct: 248 -------------------CWQWNPSDRPSFAEI 262
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 127/296 (42%), Gaps = 60/296 (20%)
Query: 522 AATENFSIQSKLGEGGFGPVY----KGRLLNGQE--VAVKRLSNQSGQGLK-EFKNEMML 574
A E ++ +LG+G FG VY KG + + E VA+K ++ + + EF NE +
Sbjct: 9 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 68
Query: 575 IAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFD-------------PTKKHLL 621
+ + ++VRLLG + ++I E M L +L P+ ++
Sbjct: 69 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 128
Query: 622 GWQLRVRIIDGIAQ------------------DQHMNPKISDFGMAR-MFGGDELQGNTK 662
Q+ I DG+A + KI DFGM R ++ D + K
Sbjct: 129 --QMAGEIADGMAYLNANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGK 186
Query: 663 RIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEI--LSSKKNTGVYNTDSFNLLGHAWS 720
++ +MSPE +GVF+ SDV+SFGV++ EI L+ + G+ N +
Sbjct: 187 GLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGL 245
Query: 721 LCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNEL 776
L K D +++ + + +C Q N + RP+ +++S I E+
Sbjct: 246 LDKPDNCPDML----------------LELMRMCWQYNPKMRPSFLEIISSIKEEM 285
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 123/274 (44%), Gaps = 56/274 (20%)
Query: 526 NFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
+ +++ KLG G +G VY+G VAVK L + + ++EF E ++ +++H NLV
Sbjct: 27 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 85
Query: 585 RLLGCCIEQGEKILIYEYMVNKSL--------------DVFLFDPT----------KKHL 620
+LLG C + +I E+M +L V L+ T KK+
Sbjct: 86 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 145
Query: 621 LGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGV 680
+ L R + + + H+ K++DFG++R+ GD + + +PE
Sbjct: 146 IHRDLAAR--NCLVGENHL-VKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNK 201
Query: 681 FSVKSDVFSFGVLMLEILSSKKN--TGVYNTDSFNLLGHAWSLCK----NDRAHELMDPV 734
FS+KSDV++FGVL+ EI + + G+ + + LL + + + ++ +ELM
Sbjct: 202 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRA- 260
Query: 735 LQNEVSLPMLVRYINVALLCVQENAEDRPTMSDV 768
C Q N DRP+ +++
Sbjct: 261 -------------------CWQWNPSDRPSFAEI 275
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 128/296 (43%), Gaps = 60/296 (20%)
Query: 522 AATENFSIQSKLGEGGFGPVY----KGRLLNGQE--VAVKRLSNQSGQGLK-EFKNEMML 574
A E ++ +LG+G FG VY KG + + E VA+K ++ + + EF NE +
Sbjct: 22 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 81
Query: 575 IAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFD-------------PTKKHLL 621
+ + ++VRLLG + ++I E M L +L P+ ++
Sbjct: 82 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 141
Query: 622 GWQLRVRIIDGIAQ------------------DQHMNPKISDFGMAR-MFGGDELQGNTK 662
Q+ I DG+A + KI DFGM R ++ D + K
Sbjct: 142 --QMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 199
Query: 663 RIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEI--LSSKKNTGVYNTDSFNLLGHAWS 720
++ +MSPE +GVF+ SDV+SFGV++ EI L+ + G+ N +
Sbjct: 200 GLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGL 258
Query: 721 LCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNEL 776
L K D +++ +++ +C Q N + RP+ +++S I E+
Sbjct: 259 LDKPDNCPDMLFELMR----------------MCWQYNPKMRPSFLEIISSIKEEM 298
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 128/295 (43%), Gaps = 60/295 (20%)
Query: 523 ATENFSIQSKLGEGGFGPVY----KGRLLNGQE--VAVKRLSNQSGQGLK-EFKNEMMLI 575
A E ++ +LG+G FG VY KG + + E VA+K ++ + + EF NE ++
Sbjct: 13 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 72
Query: 576 AKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFD-------------PTKKHLLG 622
+ ++VRLLG + ++I E M L +L P+ ++
Sbjct: 73 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMI- 131
Query: 623 WQLRVRIIDGIAQ------------------DQHMNPKISDFGMAR-MFGGDELQGNTKR 663
Q+ I DG+A + KI DFGM R ++ D + K
Sbjct: 132 -QMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKG 190
Query: 664 IVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEI--LSSKKNTGVYNTDSFNLLGHAWSL 721
++ +MSPE +GVF+ SDV+SFGV++ EI L+ + G+ N + L
Sbjct: 191 LLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLL 249
Query: 722 CKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNEL 776
K D +++ +++ +C Q N + RP+ +++S I E+
Sbjct: 250 DKPDNCPDMLFELMR----------------MCWQYNPKMRPSFLEIISSIKEEM 288
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 130/314 (41%), Gaps = 62/314 (19%)
Query: 522 AATENFSIQSKLGEGGFGPVYKGR---LLNGQ---EVAVKRLSNQSGQGLK-EFKNEMML 574
+ E ++ +LG+G FG VY+G ++ G+ VAVK ++ + + EF NE +
Sbjct: 14 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASV 73
Query: 575 IAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFD-------------PTKKHLL 621
+ ++VRLLG + +++ E M + L +L PT + ++
Sbjct: 74 MKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMI 133
Query: 622 GWQLRVRIIDGIAQ------------------DQHMNPKISDFGMARMFGGDELQGNTKR 663
Q+ I DG+A KI DFGM R +
Sbjct: 134 --QMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGK 191
Query: 664 IVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEI--LSSKKNTGVYNTDSFNLLGHAWSL 721
+ +M+PE +GVF+ SD++SFGV++ EI L+ + G+ N + L
Sbjct: 192 GLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYL 251
Query: 722 CKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFNLPS 781
+ D E R ++ +C Q N + RPT ++V+++ ++L
Sbjct: 252 DQPDNCPE----------------RVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL----H 291
Query: 782 PKEPPFTTFTKGKN 795
P P + F +N
Sbjct: 292 PSFPEVSFFHSEEN 305
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 128/296 (43%), Gaps = 60/296 (20%)
Query: 522 AATENFSIQSKLGEGGFGPVY----KGRLLNGQE--VAVKRLSNQSGQGLK-EFKNEMML 574
A E ++ +LG+G FG VY KG + + E VA+K ++ + + EF NE +
Sbjct: 13 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 72
Query: 575 IAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFD-------------PTKKHLL 621
+ + ++VRLLG + ++I E M L +L P+ ++
Sbjct: 73 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 132
Query: 622 GWQLRVRIIDGIAQ------------------DQHMNPKISDFGMAR-MFGGDELQGNTK 662
Q+ I DG+A + KI DFGM R ++ D + K
Sbjct: 133 --QMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 190
Query: 663 RIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEI--LSSKKNTGVYNTDSFNLLGHAWS 720
++ +MSPE +GVF+ SDV+SFGV++ EI L+ + G+ N +
Sbjct: 191 GLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGL 249
Query: 721 LCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNEL 776
L K D +++ +++ +C Q N + RP+ +++S I E+
Sbjct: 250 LDKPDNCPDMLFELMR----------------MCWQYNPKMRPSFLEIISSIKEEM 289
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 128/296 (43%), Gaps = 60/296 (20%)
Query: 522 AATENFSIQSKLGEGGFGPVY----KGRLLNGQE--VAVKRLSNQSGQGLK-EFKNEMML 574
A E ++ +LG+G FG VY KG + + E VA+K ++ + + EF NE +
Sbjct: 16 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 75
Query: 575 IAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFD-------------PTKKHLL 621
+ + ++VRLLG + ++I E M L +L P+ ++
Sbjct: 76 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 135
Query: 622 GWQLRVRIIDGIAQ------------------DQHMNPKISDFGMAR-MFGGDELQGNTK 662
Q+ I DG+A + KI DFGM R ++ D + K
Sbjct: 136 --QMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 193
Query: 663 RIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEI--LSSKKNTGVYNTDSFNLLGHAWS 720
++ +MSPE +GVF+ SDV+SFGV++ EI L+ + G+ N +
Sbjct: 194 GLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGL 252
Query: 721 LCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNEL 776
L K D +++ +++ +C Q N + RP+ +++S I E+
Sbjct: 253 LDKPDNCPDMLFELMR----------------MCWQYNPKMRPSFLEIISSIKEEM 292
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 128/296 (43%), Gaps = 60/296 (20%)
Query: 522 AATENFSIQSKLGEGGFGPVY----KGRLLNGQE--VAVKRLSNQSGQGLK-EFKNEMML 574
A E ++ +LG+G FG VY KG + + E VA+K ++ + + EF NE +
Sbjct: 9 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 68
Query: 575 IAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFD-------------PTKKHLL 621
+ + ++VRLLG + ++I E M L +L P+ ++
Sbjct: 69 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 128
Query: 622 GWQLRVRIIDGIAQ------------------DQHMNPKISDFGMAR-MFGGDELQGNTK 662
Q+ I DG+A + KI DFGM R ++ D + K
Sbjct: 129 --QMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 186
Query: 663 RIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEI--LSSKKNTGVYNTDSFNLLGHAWS 720
++ +MSPE +GVF+ SDV+SFGV++ EI L+ + G+ N +
Sbjct: 187 GLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGL 245
Query: 721 LCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNEL 776
L K D +++ +++ +C Q N + RP+ +++S I E+
Sbjct: 246 LDKPDNCPDMLFELMR----------------MCWQYNPKMRPSFLEIISSIKEEM 285
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 128/296 (43%), Gaps = 60/296 (20%)
Query: 522 AATENFSIQSKLGEGGFGPVY----KGRLLNGQE--VAVKRLSNQSGQGLK-EFKNEMML 574
A E ++ +LG+G FG VY KG + + E VA+K ++ + + EF NE +
Sbjct: 15 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 74
Query: 575 IAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFD-------------PTKKHLL 621
+ + ++VRLLG + ++I E M L +L P+ ++
Sbjct: 75 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 134
Query: 622 GWQLRVRIIDGIAQ------------------DQHMNPKISDFGMAR-MFGGDELQGNTK 662
Q+ I DG+A + KI DFGM R ++ D + K
Sbjct: 135 --QMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 192
Query: 663 RIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEI--LSSKKNTGVYNTDSFNLLGHAWS 720
++ +MSPE +GVF+ SDV+SFGV++ EI L+ + G+ N +
Sbjct: 193 GLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGL 251
Query: 721 LCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNEL 776
L K D +++ +++ +C Q N + RP+ +++S I E+
Sbjct: 252 LDKPDNCPDMLFELMR----------------MCWQYNPKMRPSFLEIISSIKEEM 291
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 128/296 (43%), Gaps = 60/296 (20%)
Query: 522 AATENFSIQSKLGEGGFGPVY----KGRLLNGQE--VAVKRLSNQSGQGLK-EFKNEMML 574
A E ++ +LG+G FG VY KG + + E VA+K ++ + + EF NE +
Sbjct: 44 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 103
Query: 575 IAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFD-------------PTKKHLL 621
+ + ++VRLLG + ++I E M L +L P+ ++
Sbjct: 104 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 163
Query: 622 GWQLRVRIIDGIAQ------------------DQHMNPKISDFGMAR-MFGGDELQGNTK 662
Q+ I DG+A + KI DFGM R ++ D + K
Sbjct: 164 --QMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 221
Query: 663 RIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEI--LSSKKNTGVYNTDSFNLLGHAWS 720
++ +MSPE +GVF+ SDV+SFGV++ EI L+ + G+ N +
Sbjct: 222 GLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGL 280
Query: 721 LCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNEL 776
L K D +++ +++ +C Q N + RP+ +++S I E+
Sbjct: 281 LDKPDNCPDMLFELMR----------------MCWQYNPKMRPSFLEIISSIKEEM 320
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 128/296 (43%), Gaps = 60/296 (20%)
Query: 522 AATENFSIQSKLGEGGFGPVY----KGRLLNGQE--VAVKRLSNQSGQGLK-EFKNEMML 574
A E ++ +LG+G FG VY KG + + E VA+K ++ + + EF NE +
Sbjct: 15 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 74
Query: 575 IAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFD-------------PTKKHLL 621
+ + ++VRLLG + ++I E M L +L P+ ++
Sbjct: 75 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 134
Query: 622 GWQLRVRIIDGIAQ------------------DQHMNPKISDFGMAR-MFGGDELQGNTK 662
Q+ I DG+A + KI DFGM R ++ D + K
Sbjct: 135 --QMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 192
Query: 663 RIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEI--LSSKKNTGVYNTDSFNLLGHAWS 720
++ +MSPE +GVF+ SDV+SFGV++ EI L+ + G+ N +
Sbjct: 193 GLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGL 251
Query: 721 LCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNEL 776
L K D +++ +++ +C Q N + RP+ +++S I E+
Sbjct: 252 LDKPDNCPDMLFELMR----------------MCWQYNPKMRPSFLEIISSIKEEM 291
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 130/296 (43%), Gaps = 41/296 (13%)
Query: 514 LFSFASVTAATENFSIQSKLGEGGFGPVYKGRL-LNGQE---VAVKRLS-NQSGQGLKEF 568
+ FA AT N SI +G G FG V GRL L ++ VA+K L + + ++F
Sbjct: 6 VHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 64
Query: 569 KNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFL---------------- 612
E ++ + H N++RL G + +++ EYM N SLD FL
Sbjct: 65 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML 124
Query: 613 --FDPTKKHL--LGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGT- 667
K+L +G+ R I + ++ K+SDFG++R+ D T R
Sbjct: 125 RGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 184
Query: 668 YGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRA 727
+ SPE F+ SDV+S+G+++ E++S Y + + + + D
Sbjct: 185 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS-------YGERPYWEMSNQDVIKAVDEG 237
Query: 728 HELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFNLPSPK 783
+ L P + +L L+ L C Q++ +RP +VS+++ + N S K
Sbjct: 238 YRL-PPPMDCPAALYQLM------LDCWQKDRNNRPKFEQIVSILDKLIRNPGSLK 286
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 123/295 (41%), Gaps = 58/295 (19%)
Query: 522 AATENFSIQSKLGEGGFGPVY----KGRLLNGQE--VAVKRLSNQSGQGLK-EFKNEMML 574
A E ++ +LG+G FG VY KG + + E VA+K ++ + + EF NE +
Sbjct: 7 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 66
Query: 575 IAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFD-------------PTKKHLL 621
+ + ++VRLLG + ++I E M L +L P+ ++
Sbjct: 67 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 126
Query: 622 GWQLRVRIIDGIAQ------------------DQHMNPKISDFGMARMFGGDELQGNTKR 663
Q+ I DG+A + KI DFGM R + +
Sbjct: 127 --QMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGK 184
Query: 664 IVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEI--LSSKKNTGVYNTDSFNLLGHAWSL 721
+ +MSPE +GVF+ SDV+SFGV++ EI L+ + G+ N + L
Sbjct: 185 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLL 244
Query: 722 CKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNEL 776
K D +++ + + +C Q N + RP+ +++S I E+
Sbjct: 245 DKPDNCPDML----------------LELMRMCWQYNPKMRPSFLEIISSIKEEM 283
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 130/296 (43%), Gaps = 41/296 (13%)
Query: 514 LFSFASVTAATENFSIQSKLGEGGFGPVYKGRL-LNGQE---VAVKRLS-NQSGQGLKEF 568
+ FA AT N SI +G G FG V GRL L ++ VA+K L + + ++F
Sbjct: 33 VHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 91
Query: 569 KNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFL---------------- 612
E ++ + H N++RL G + +++ EYM N SLD FL
Sbjct: 92 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML 151
Query: 613 --FDPTKKHL--LGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGT- 667
K+L +G+ R I + ++ K+SDFG++R+ D T R
Sbjct: 152 RGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 211
Query: 668 YGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRA 727
+ SPE F+ SDV+S+G+++ E++S Y + + + + D
Sbjct: 212 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS-------YGERPYWEMSNQDVIKAVDEG 264
Query: 728 HELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFNLPSPK 783
+ L P + +L L+ L C Q++ +RP +VS+++ + N S K
Sbjct: 265 YRL-PPPMDCPAALYQLM------LDCWQKDRNNRPKFEQIVSILDKLIRNPGSLK 313
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 130/296 (43%), Gaps = 41/296 (13%)
Query: 514 LFSFASVTAATENFSIQSKLGEGGFGPVYKGRL-LNGQE---VAVKRLS-NQSGQGLKEF 568
+ FA AT N SI +G G FG V GRL L ++ VA+K L + + ++F
Sbjct: 23 VHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 81
Query: 569 KNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFL---------------- 612
E ++ + H N++RL G + +++ EYM N SLD FL
Sbjct: 82 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML 141
Query: 613 --FDPTKKHL--LGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGT- 667
K+L +G+ R I + ++ K+SDFG++R+ D T R
Sbjct: 142 RGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 201
Query: 668 YGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRA 727
+ SPE F+ SDV+S+G+++ E++S Y + + + + D
Sbjct: 202 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS-------YGERPYWEMSNQDVIKAVDEG 254
Query: 728 HELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFNLPSPK 783
+ L P + +L L+ L C Q++ +RP +VS+++ + N S K
Sbjct: 255 YRL-PPPMDCPAALYQLM------LDCWQKDRNNRPKFEQIVSILDKLIRNPGSLK 303
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 124/294 (42%), Gaps = 58/294 (19%)
Query: 523 ATENFSIQSKLGEGGFGPVY----KGRLLNGQE--VAVKRLSNQSGQGLK-EFKNEMMLI 575
A E ++ +LG+G FG VY KG + + E VA+K ++ + + EF NE ++
Sbjct: 17 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 76
Query: 576 AKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFD-------------PTKKHLLG 622
+ ++VRLLG + ++I E M L +L P+ ++
Sbjct: 77 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI- 135
Query: 623 WQLRVRIIDGIAQ------------------DQHMNPKISDFGMARMFGGDELQGNTKRI 664
Q+ I DG+A + KI DFGM R + +
Sbjct: 136 -QMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKG 194
Query: 665 VGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEI--LSSKKNTGVYNTDSFNLLGHAWSLC 722
+ +MSPE +GVF+ SDV+SFGV++ EI L+ + G+ N + L
Sbjct: 195 LLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLD 254
Query: 723 KNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNEL 776
K D +++ +++ +C Q N + RP+ +++S I E+
Sbjct: 255 KPDNCPDMLFELMR----------------MCWQYNPKMRPSFLEIISSIKEEM 292
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 121/275 (44%), Gaps = 46/275 (16%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
E+ ++ KLG G FG V+ +VAVK + S ++ F E ++ LQH LV
Sbjct: 15 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLV 73
Query: 585 RLLGCCIEQGEKILIYEYMVNKSLDVFL-FDPTKKHLLG--WQLRVRIIDGIAQDQHMNP 641
+L ++ I I E+M SL FL D K L +I +G+A + N
Sbjct: 74 KLHAVVTKEPIYI-ITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNY 132
Query: 642 ------------------KISDFGMARMFGGDELQGNTKRIVGTY--GYMSPEYALEGVF 681
KI+DFG+AR+ +E T R + + +PE G F
Sbjct: 133 IHRDLRAANILVSASLVCKIADFGLARVIEDNEY---TAREGAKFPIKWTAPEAINFGSF 189
Query: 682 SVKSDVFSFGVLMLEILSSKK--NTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEV 739
++KSDV+SFG+L++EI++ + G+ N + L + + + + E +
Sbjct: 190 TIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEEL-------- 241
Query: 740 SLPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774
N+ + C + E+RPT + S++++
Sbjct: 242 --------YNIMMRCWKNRPEERPTFEYIQSVLDD 268
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 122/274 (44%), Gaps = 56/274 (20%)
Query: 526 NFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
+ +++ KLG G +G VY+G VAVK L + + ++EF E ++ +++H NLV
Sbjct: 16 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 74
Query: 585 RLLGCCIEQGEKILIYEYMVNKSL--------------DVFLFDPT----------KKHL 620
+LLG C + +I E+M +L V L+ T KK+
Sbjct: 75 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 134
Query: 621 LGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGV 680
+ L R + + + H+ K++DFG++R+ GD + +PE
Sbjct: 135 IHRDLAAR--NCLVGENHL-VKVADFGLSRLMTGDTYTAPAGAKFPI-KWTAPESLAYNK 190
Query: 681 FSVKSDVFSFGVLMLEILSSKKN--TGVYNTDSFNLLGHAWSLCK----NDRAHELMDPV 734
FS+KSDV++FGVL+ EI + + G+ + + LL + + + ++ +ELM
Sbjct: 191 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRA- 249
Query: 735 LQNEVSLPMLVRYINVALLCVQENAEDRPTMSDV 768
C Q N DRP+ +++
Sbjct: 250 -------------------CWQWNPSDRPSFAEI 264
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 130/296 (43%), Gaps = 41/296 (13%)
Query: 514 LFSFASVTAATENFSIQSKLGEGGFGPVYKGRL-LNGQE---VAVKRLS-NQSGQGLKEF 568
+ FA AT N SI +G G FG V GRL L ++ VA+K L + + ++F
Sbjct: 35 VHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 569 KNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFL---------------- 612
E ++ + H N++RL G + +++ EYM N SLD FL
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML 153
Query: 613 --FDPTKKHL--LGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGT- 667
K+L +G+ R I + ++ K+SDFG++R+ D T R
Sbjct: 154 RGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
Query: 668 YGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRA 727
+ SPE F+ SDV+S+G+++ E++S Y + + + + D
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS-------YGERPYWEMSNQDVIKAVDEG 266
Query: 728 HELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFNLPSPK 783
+ L P + +L L+ L C Q++ +RP +VS+++ + N S K
Sbjct: 267 YRL-PPPMDCPAALYQLM------LDCWQKDRNNRPKFEQIVSILDKLIRNPGSLK 315
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 122/274 (44%), Gaps = 56/274 (20%)
Query: 526 NFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
+ +++ KLG G +G VY+G VAVK L + + ++EF E ++ +++H NLV
Sbjct: 15 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 73
Query: 585 RLLGCCIEQGEKILIYEYMVNKSL--------------DVFLFDPT----------KKHL 620
+LLG C + +I E+M +L V L+ T KK+
Sbjct: 74 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 133
Query: 621 LGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGV 680
+ L R + + + H+ K++DFG++R+ GD + +PE
Sbjct: 134 IHRDLAAR--NCLVGENHL-VKVADFGLSRLMTGDTYTAPAGAKFPI-KWTAPESLAYNK 189
Query: 681 FSVKSDVFSFGVLMLEILSSKKN--TGVYNTDSFNLLGHAWSLCK----NDRAHELMDPV 734
FS+KSDV++FGVL+ EI + + G+ + + LL + + + ++ +ELM
Sbjct: 190 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRA- 248
Query: 735 LQNEVSLPMLVRYINVALLCVQENAEDRPTMSDV 768
C Q N DRP+ +++
Sbjct: 249 -------------------CWQWNPSDRPSFAEI 263
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 130/296 (43%), Gaps = 41/296 (13%)
Query: 514 LFSFASVTAATENFSIQSKLGEGGFGPVYKGRL-LNGQE---VAVKRLS-NQSGQGLKEF 568
+ FA AT N SI +G G FG V GRL L ++ VA+K L + + ++F
Sbjct: 35 VHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 569 KNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFL---------------- 612
E ++ + H N++RL G + +++ EYM N SLD FL
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML 153
Query: 613 --FDPTKKHL--LGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGT- 667
K+L +G+ R I + ++ K+SDFG++R+ D T R
Sbjct: 154 RGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
Query: 668 YGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRA 727
+ SPE F+ SDV+S+G+++ E++S Y + + + + D
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS-------YGERPYWEMSNQDVIKAVDEG 266
Query: 728 HELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFNLPSPK 783
+ L P + +L L+ L C Q++ +RP +VS+++ + N S K
Sbjct: 267 YRL-PPPMDCPAALYQLM------LDCWQKDRNNRPKFEQIVSILDKLIRNPGSLK 315
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 130/296 (43%), Gaps = 41/296 (13%)
Query: 514 LFSFASVTAATENFSIQSKLGEGGFGPVYKGRL-LNGQE---VAVKRLS-NQSGQGLKEF 568
+ FA AT N SI +G G FG V GRL L ++ VA+K L + + ++F
Sbjct: 35 VHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 569 KNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFL---------------- 612
E ++ + H N++RL G + +++ EYM N SLD FL
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML 153
Query: 613 --FDPTKKHL--LGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGT- 667
K+L +G+ R I + ++ K+SDFG++R+ D T R
Sbjct: 154 RGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
Query: 668 YGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRA 727
+ SPE F+ SDV+S+G+++ E++S Y + + + + D
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS-------YGERPYWEMSNQDVIKAVDEG 266
Query: 728 HELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFNLPSPK 783
+ L P + +L L+ L C Q++ +RP +VS+++ + N S K
Sbjct: 267 YRL-PPPMDCPAALYQLM------LDCWQKDRNNRPKFEQIVSILDKLIRNPGSLK 315
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 121/275 (44%), Gaps = 46/275 (16%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
E+ ++ KLG G FG V+ +VAVK + S ++ F E ++ LQH LV
Sbjct: 188 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLV 246
Query: 585 RLLGCCIEQGEKILIYEYMVNKSLDVFL-FDPTKKHLLG--WQLRVRIIDGIAQDQHMNP 641
+L ++ I I E+M SL FL D K L +I +G+A + N
Sbjct: 247 KLHAVVTKEPIYI-ITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNY 305
Query: 642 ------------------KISDFGMARMFGGDELQGNTKRIVGTY--GYMSPEYALEGVF 681
KI+DFG+AR+ +E T R + + +PE G F
Sbjct: 306 IHRDLRAANILVSASLVCKIADFGLARVIEDNEY---TAREGAKFPIKWTAPEAINFGSF 362
Query: 682 SVKSDVFSFGVLMLEILSSKK--NTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEV 739
++KSDV+SFG+L++EI++ + G+ N + L + + + + E +
Sbjct: 363 TIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEEL-------- 414
Query: 740 SLPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774
N+ + C + E+RPT + S++++
Sbjct: 415 --------YNIMMRCWKNRPEERPTFEYIQSVLDD 441
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 130/296 (43%), Gaps = 41/296 (13%)
Query: 514 LFSFASVTAATENFSIQSKLGEGGFGPVYKGRL-LNGQE---VAVKRLS-NQSGQGLKEF 568
+ FA AT N SI +G G FG V GRL L ++ VA+K L + + ++F
Sbjct: 35 VHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 569 KNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFL---------------- 612
E ++ + H N++RL G + +++ EYM N SLD FL
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML 153
Query: 613 --FDPTKKHL--LGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGT- 667
K+L +G+ R I + ++ K+SDFG++R+ D T R
Sbjct: 154 RGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
Query: 668 YGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRA 727
+ SPE F+ SDV+S+G+++ E++S Y + + + + D
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS-------YGERPYWEMSNQDVIKAVDEG 266
Query: 728 HELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFNLPSPK 783
+ L P + +L L+ L C Q++ +RP +VS+++ + N S K
Sbjct: 267 YRL-PPPMDCPAALYQLM------LDCWQKDRNNRPKFEQIVSILDKLIRNPGSLK 315
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 120/291 (41%), Gaps = 52/291 (17%)
Query: 515 FSFASVTAATENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMML 574
+ S ++ + +LG G FG V G+ +VA+K + S EF E +
Sbjct: 14 LGYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKV 72
Query: 575 IAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDP------------------- 615
+ L H LV+L G C +Q +I EYM N L +L +
Sbjct: 73 MMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEA 132
Query: 616 ----TKKHLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGT---Y 668
K L L R + + DQ + K+SDFG++R DE + VG+
Sbjct: 133 MEYLESKQFLHRDLAAR--NCLVNDQGV-VKVSDFGLSRYVLDDEYTSS----VGSKFPV 185
Query: 669 GYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAH 728
+ PE + FS KSD+++FGVLM EI S K T+S A L
Sbjct: 186 RWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL------- 238
Query: 729 ELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPT----MSDVVSMINNE 775
L P L +E + + C E A++RPT +S+++ +++ E
Sbjct: 239 RLYRPHLASE-------KVYTIMYSCWHEKADERPTFKILLSNILDVMDEE 282
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 124/260 (47%), Gaps = 38/260 (14%)
Query: 527 FSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLS---NQSGQGLKEFKNEMMLIAKLQHRN 582
FS ++G G FG VY R + N + VA+K++S QS + ++ E+ + KL+H N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 583 LVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRI---IDGIA--QDQ 637
++ GC + + L+ EY + + D L + KK L ++ + G+A
Sbjct: 77 TIQYRGCYLREHTAWLVMEYCLGSASD--LLEVHKKPLQEVEIAAVTHGALQGLAYLHSH 134
Query: 638 HM--------NPKISDFGMARM--FGGDELQGNTKRIVGTYGYMSPEYAL---EGVFSVK 684
+M N +S+ G+ ++ FG + VGT +M+PE L EG + K
Sbjct: 135 NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWMAPEVILAMDEGQYDGK 194
Query: 685 SDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPML 744
DV+S G+ +E+ +++ ++N ++ + L H + +N+ P LQ+
Sbjct: 195 VDVWSLGITCIEL--AERKPPLFNMNAMSALYH---IAQNE------SPALQSGHWSEYF 243
Query: 745 VRYINVALLCVQENAEDRPT 764
+++ C+Q+ +DRPT
Sbjct: 244 RNFVDS---CLQKIPQDRPT 260
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 129/296 (43%), Gaps = 41/296 (13%)
Query: 514 LFSFASVTAATENFSIQSKLGEGGFGPVYKGRL-LNGQE---VAVKRLS-NQSGQGLKEF 568
+ FA AT N SI +G G FG V GRL L ++ VA+K L + + ++F
Sbjct: 35 VHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 569 KNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFL---------------- 612
E ++ + H N++RL G + +++ EYM N SLD FL
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML 153
Query: 613 --FDPTKKHL--LGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGT- 667
K+L +G+ R I + ++ K+SDFG+ R+ D T R
Sbjct: 154 RGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIP 213
Query: 668 YGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRA 727
+ SPE F+ SDV+S+G+++ E++S Y + + + + D
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS-------YGERPYWEMSNQDVIKAVDEG 266
Query: 728 HELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFNLPSPK 783
+ L P + +L L+ L C Q++ +RP +VS+++ + N S K
Sbjct: 267 YRL-PPPMDCPAALYQLM------LDCWQKDRNNRPKFEQIVSILDKLIRNPGSLK 315
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 133/300 (44%), Gaps = 49/300 (16%)
Query: 514 LFSFASVTAATENFSIQSKLGEGGFGPVYKGRL-LNGQE---VAVKRLS-NQSGQGLKEF 568
+ FA AT N SI +G G FG V GRL L ++ VA+K L + + ++F
Sbjct: 35 VHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 569 KNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQL--R 626
E ++ + H N++RL G + +++ EYM N SLD FL +KH + +
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL----RKHDAQFTVIQL 149
Query: 627 VRIIDGIAQ----------------------DQHMNPKISDFGMARMFGGDELQGNTKRI 664
V ++ GIA + ++ K+SDFG++R+ D T R
Sbjct: 150 VGMLRGIASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 209
Query: 665 VGT-YGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCK 723
+ SPE F+ SDV+S+G+++ E++S Y + + + +
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS-------YGERPYWEMSNQDVIKA 262
Query: 724 NDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFNLPSPK 783
D + L P + +L L+ L C Q++ +RP +VS+++ + N S K
Sbjct: 263 VDEGYRL-PPPMDCPAALYQLM------LDCWQKDRNNRPKFEQIVSILDKLIRNPGSLK 315
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 124/260 (47%), Gaps = 38/260 (14%)
Query: 527 FSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLS---NQSGQGLKEFKNEMMLIAKLQHRN 582
FS ++G G FG VY R + N + VA+K++S QS + ++ E+ + KL+H N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 583 LVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRI---IDGIA--QDQ 637
++ GC + + L+ EY + + D L + KK L ++ + G+A
Sbjct: 116 TIQYRGCYLREHTAWLVMEYCLGSASD--LLEVHKKPLQEVEIAAVTHGALQGLAYLHSH 173
Query: 638 HM--------NPKISDFGMARM--FGGDELQGNTKRIVGTYGYMSPEYAL---EGVFSVK 684
+M N +S+ G+ ++ FG + VGT +M+PE L EG + K
Sbjct: 174 NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWMAPEVILAMDEGQYDGK 233
Query: 685 SDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPML 744
DV+S G+ +E+ +++ ++N ++ + L H + +N+ P LQ+
Sbjct: 234 VDVWSLGITCIEL--AERKPPLFNMNAMSALYH---IAQNE------SPALQSGHWSEYF 282
Query: 745 VRYINVALLCVQENAEDRPT 764
+++ C+Q+ +DRPT
Sbjct: 283 RNFVDS---CLQKIPQDRPT 299
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 118/281 (41%), Gaps = 52/281 (18%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
++ + +LG G FG V G+ +VA+K + S EF E ++ L H LV
Sbjct: 8 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLV 66
Query: 585 RLLGCCIEQGEKILIYEYMVNKSLDVFLFDP-----------------------TKKHLL 621
+L G C +Q +I EYM N L +L + K L
Sbjct: 67 QLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFL 126
Query: 622 GWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGT---YGYMSPEYALE 678
L R + + DQ + K+SDFG++R DE + VG+ + PE +
Sbjct: 127 HRDLAAR--NCLVNDQGV-VKVSDFGLSRYVLDDEYTSS----VGSKFPVRWSPPEVLMY 179
Query: 679 GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNE 738
FS KSD+++FGVLM EI S K T+S A L L P L +E
Sbjct: 180 SKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL-------RLYRPHLASE 232
Query: 739 VSLPMLVRYINVALLCVQENAEDRPT----MSDVVSMINNE 775
+ + C E A++RPT +S+++ +++ E
Sbjct: 233 -------KVYTIMYSCWHEKADERPTFKILLSNILDVMDEE 266
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 119/283 (42%), Gaps = 52/283 (18%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
++ + +LG G FG V G+ +VA+K + S EF E ++ L H LV
Sbjct: 9 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLV 67
Query: 585 RLLGCCIEQGEKILIYEYMVNKSLDVFLFDP-----------------------TKKHLL 621
+L G C +Q +I EYM N L +L + K L
Sbjct: 68 QLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFL 127
Query: 622 GWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGT---YGYMSPEYALE 678
L R + + DQ + K+SDFG++R DE + VG+ + PE +
Sbjct: 128 HRDLAAR--NCLVNDQGV-VKVSDFGLSRYVLDDEYTSS----VGSKFPVRWSPPEVLMY 180
Query: 679 GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNE 738
FS KSD+++FGVLM EI S K T+S A L L P L +E
Sbjct: 181 SKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL-------RLYRPHLASE 233
Query: 739 VSLPMLVRYINVALLCVQENAEDRPT----MSDVVSMINNELF 777
+ + C E A++RPT +S+++ +++ L+
Sbjct: 234 -------KVYTIMYSCWHEKADERPTFKILLSNILDVMDENLY 269
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 118/281 (41%), Gaps = 52/281 (18%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
++ + +LG G FG V G+ +VA+K + S EF E ++ L H LV
Sbjct: 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLV 62
Query: 585 RLLGCCIEQGEKILIYEYMVNKSLDVFLFDP-----------------------TKKHLL 621
+L G C +Q +I EYM N L +L + K L
Sbjct: 63 QLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFL 122
Query: 622 GWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGT---YGYMSPEYALE 678
L R + + DQ + K+SDFG++R DE + VG+ + PE +
Sbjct: 123 HRDLAAR--NCLVNDQGV-VKVSDFGLSRYVLDDEYTSS----VGSKFPVRWSPPEVLMY 175
Query: 679 GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNE 738
FS KSD+++FGVLM EI S K T+S A L L P L +E
Sbjct: 176 SKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL-------RLYRPHLASE 228
Query: 739 VSLPMLVRYINVALLCVQENAEDRPT----MSDVVSMINNE 775
+ + C E A++RPT +S+++ +++ E
Sbjct: 229 -------KVYTIMYSCWHEKADERPTFKILLSNILDVMDEE 262
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 119/276 (43%), Gaps = 50/276 (18%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
E ++ +LG G FG V G+ +VAVK + S EF E + KL H LV
Sbjct: 8 EEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLV 66
Query: 585 RLLGCCIEQGEKILIYEYMVNKSLDVFL------FDPTKKHLLGWQLRVRIIDGIA---- 634
+ G C ++ ++ EY+ N L +L +P++ LL ++ + +G+A
Sbjct: 67 KFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQ--LL--EMCYDVCEGMAFLES 122
Query: 635 --------------QDQHMNPKISDFGMARMFGGDELQGNTKRIVGT---YGYMSPEYAL 677
D+ + K+SDFGM R D+ + VGT + +PE
Sbjct: 123 HQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSS----VGTKFPVKWSAPEVFH 178
Query: 678 EGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQN 737
+S KSDV++FG+LM E+ S K ++L ++ + K + H L P L +
Sbjct: 179 YFKYSSKSDVWAFGILMWEVFSLGKM-------PYDLYTNSEVVLKVSQGHRLYRPHLAS 231
Query: 738 EVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMIN 773
+ ++ C E E RPT ++S I
Sbjct: 232 DTIYQIMYS-------CWHELPEKRPTFQQLLSSIE 260
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 120/291 (41%), Gaps = 52/291 (17%)
Query: 515 FSFASVTAATENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMML 574
+ S ++ + +LG G FG V G+ +VA+K + S EF E +
Sbjct: 5 LGYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKV 63
Query: 575 IAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDP------------------- 615
+ L H LV+L G C +Q +I EYM N L +L +
Sbjct: 64 MMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEA 123
Query: 616 ----TKKHLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGT---Y 668
K L L R + + DQ + K+SDFG++R DE + VG+
Sbjct: 124 MEYLESKQFLHRDLAAR--NCLVNDQGV-VKVSDFGLSRYVLDDEYTSS----VGSKFPV 176
Query: 669 GYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAH 728
+ PE + FS KSD+++FGVLM EI S K T+S A L
Sbjct: 177 RWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL------- 229
Query: 729 ELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPT----MSDVVSMINNE 775
L P L +E + + C E A++RPT +S+++ +++ E
Sbjct: 230 RLYRPHLASE-------KVYTIMYSCWHEKADERPTFKILLSNILDVMDEE 273
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 91/197 (46%), Gaps = 28/197 (14%)
Query: 531 SKLGEGGFGPVYKGRLL-----NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVR 585
+LG+G FG V R G+ VAVK+L + + + L++F+ E+ ++ LQH N+V+
Sbjct: 15 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 74
Query: 586 LLGCCIEQGEK--ILIYEYMVNKSLDVFLFDPTKK--HLLGWQLRVRIIDG--------- 632
G C G + LI EY+ SL +L ++ H+ Q +I G
Sbjct: 75 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 134
Query: 633 ---------IAQDQHMNPKISDFGMARMFGGDELQGNTKRI-VGTYGYMSPEYALEGVFS 682
I + KI DFG+ ++ D+ K + +PE E FS
Sbjct: 135 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFS 194
Query: 683 VKSDVFSFGVLMLEILS 699
V SDV+SFGV++ E+ +
Sbjct: 195 VASDVWSFGVVLYELFT 211
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 91/197 (46%), Gaps = 28/197 (14%)
Query: 531 SKLGEGGFGPVYKGRLL-----NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVR 585
+LG+G FG V R G+ VAVK+L + + + L++F+ E+ ++ LQH N+V+
Sbjct: 21 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 80
Query: 586 LLGCCIEQGEK--ILIYEYMVNKSLDVFLFDPTKK--HLLGWQLRVRIIDG--------- 632
G C G + LI EY+ SL +L ++ H+ Q +I G
Sbjct: 81 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 140
Query: 633 ---------IAQDQHMNPKISDFGMARMFGGDELQGNTKRI-VGTYGYMSPEYALEGVFS 682
I + KI DFG+ ++ D+ K + +PE E FS
Sbjct: 141 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFS 200
Query: 683 VKSDVFSFGVLMLEILS 699
V SDV+SFGV++ E+ +
Sbjct: 201 VASDVWSFGVVLYELFT 217
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 119/290 (41%), Gaps = 50/290 (17%)
Query: 515 FSFASVTAATENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMML 574
+ S ++ + +LG G FG V G+ +VA+K + S EF E +
Sbjct: 14 LGYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKV 72
Query: 575 IAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDP------------------- 615
+ L H LV+L G C +Q +I EYM N L +L +
Sbjct: 73 MMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEA 132
Query: 616 ----TKKHLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTY--G 669
K L L R + + DQ + K+SDFG++R DE T + +
Sbjct: 133 MEYLESKQFLHRDLAAR--NCLVNDQGV-VKVSDFGLSRYVLDDE---ETSSVGSKFPVR 186
Query: 670 YMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHE 729
+ PE + FS KSD+++FGVLM EI S K T+S A L
Sbjct: 187 WSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL-------R 239
Query: 730 LMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPT----MSDVVSMINNE 775
L P L +E + + C E A++RPT +S+++ +++ E
Sbjct: 240 LYRPHLASE-------KVYTIMYSCWHEKADERPTFKILLSNILDVMDEE 282
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 91/197 (46%), Gaps = 28/197 (14%)
Query: 531 SKLGEGGFGPVYKGRLL-----NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVR 585
+LG+G FG V R G+ VAVK+L + + + L++F+ E+ ++ LQH N+V+
Sbjct: 19 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 586 LLGCCIEQGEK--ILIYEYMVNKSLDVFLFDPTKK--HLLGWQLRVRIIDG--------- 632
G C G + LI EY+ SL +L ++ H+ Q +I G
Sbjct: 79 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYLGTKRY 138
Query: 633 ---------IAQDQHMNPKISDFGMARMFGGDELQGNTKRI-VGTYGYMSPEYALEGVFS 682
I + KI DFG+ ++ D+ K + +PE E FS
Sbjct: 139 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFS 198
Query: 683 VKSDVFSFGVLMLEILS 699
V SDV+SFGV++ E+ +
Sbjct: 199 VASDVWSFGVVLYELFT 215
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 91/197 (46%), Gaps = 28/197 (14%)
Query: 531 SKLGEGGFGPVYKGRLL-----NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVR 585
+LG+G FG V R G+ VAVK+L + + + L++F+ E+ ++ LQH N+V+
Sbjct: 47 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 106
Query: 586 LLGCCIEQGEK--ILIYEYMVNKSLDVFLFDPTKK--HLLGWQLRVRIIDG--------- 632
G C G + LI EY+ SL +L ++ H+ Q +I G
Sbjct: 107 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 166
Query: 633 ---------IAQDQHMNPKISDFGMARMFGGDELQGNTKRI-VGTYGYMSPEYALEGVFS 682
I + KI DFG+ ++ D+ K + +PE E FS
Sbjct: 167 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFS 226
Query: 683 VKSDVFSFGVLMLEILS 699
V SDV+SFGV++ E+ +
Sbjct: 227 VASDVWSFGVVLYELFT 243
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 91/197 (46%), Gaps = 28/197 (14%)
Query: 531 SKLGEGGFGPVYKGRLL-----NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVR 585
+LG+G FG V R G+ VAVK+L + + + L++F+ E+ ++ LQH N+V+
Sbjct: 14 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 73
Query: 586 LLGCCIEQGEK--ILIYEYMVNKSLDVFLFDPTKK--HLLGWQLRVRIIDG--------- 632
G C G + LI EY+ SL +L ++ H+ Q +I G
Sbjct: 74 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 133
Query: 633 ---------IAQDQHMNPKISDFGMARMFGGDELQGNTKRI-VGTYGYMSPEYALEGVFS 682
I + KI DFG+ ++ D+ K + +PE E FS
Sbjct: 134 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFS 193
Query: 683 VKSDVFSFGVLMLEILS 699
V SDV+SFGV++ E+ +
Sbjct: 194 VASDVWSFGVVLYELFT 210
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 91/197 (46%), Gaps = 28/197 (14%)
Query: 531 SKLGEGGFGPVYKGRLL-----NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVR 585
+LG+G FG V R G+ VAVK+L + + + L++F+ E+ ++ LQH N+V+
Sbjct: 20 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 79
Query: 586 LLGCCIEQGEK--ILIYEYMVNKSLDVFLFDPTKK--HLLGWQLRVRIIDG--------- 632
G C G + LI EY+ SL +L ++ H+ Q +I G
Sbjct: 80 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 139
Query: 633 ---------IAQDQHMNPKISDFGMARMFGGDELQGNTKRI-VGTYGYMSPEYALEGVFS 682
I + KI DFG+ ++ D+ K + +PE E FS
Sbjct: 140 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFS 199
Query: 683 VKSDVFSFGVLMLEILS 699
V SDV+SFGV++ E+ +
Sbjct: 200 VASDVWSFGVVLYELFT 216
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 91/197 (46%), Gaps = 28/197 (14%)
Query: 531 SKLGEGGFGPVYKGRLL-----NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVR 585
+LG+G FG V R G+ VAVK+L + + + L++F+ E+ ++ LQH N+V+
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 586 LLGCCIEQGEK--ILIYEYMVNKSLDVFLFDPTKK--HLLGWQLRVRIIDG--------- 632
G C G + LI EY+ SL +L ++ H+ Q +I G
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 135
Query: 633 ---------IAQDQHMNPKISDFGMARMFGGDELQGNTKRI-VGTYGYMSPEYALEGVFS 682
I + KI DFG+ ++ D+ K + +PE E FS
Sbjct: 136 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFS 195
Query: 683 VKSDVFSFGVLMLEILS 699
V SDV+SFGV++ E+ +
Sbjct: 196 VASDVWSFGVVLYELFT 212
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 91/197 (46%), Gaps = 28/197 (14%)
Query: 531 SKLGEGGFGPVYKGRLL-----NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVR 585
+LG+G FG V R G+ VAVK+L + + + L++F+ E+ ++ LQH N+V+
Sbjct: 19 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 586 LLGCCIEQGEK--ILIYEYMVNKSLDVFLFDPTKK--HLLGWQLRVRIIDG--------- 632
G C G + LI EY+ SL +L ++ H+ Q +I G
Sbjct: 79 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 138
Query: 633 ---------IAQDQHMNPKISDFGMARMFGGDELQGNTKRI-VGTYGYMSPEYALEGVFS 682
I + KI DFG+ ++ D+ K + +PE E FS
Sbjct: 139 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFS 198
Query: 683 VKSDVFSFGVLMLEILS 699
V SDV+SFGV++ E+ +
Sbjct: 199 VASDVWSFGVVLYELFT 215
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 91/197 (46%), Gaps = 28/197 (14%)
Query: 531 SKLGEGGFGPVYKGRLL-----NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVR 585
+LG+G FG V R G+ VAVK+L + + + L++F+ E+ ++ LQH N+V+
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 586 LLGCCIEQGEK--ILIYEYMVNKSLDVFLFDPTKK--HLLGWQLRVRIIDG--------- 632
G C G + LI EY+ SL +L ++ H+ Q +I G
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 135
Query: 633 ---------IAQDQHMNPKISDFGMARMFGGDELQGNTKRI-VGTYGYMSPEYALEGVFS 682
I + KI DFG+ ++ D+ K + +PE E FS
Sbjct: 136 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFS 195
Query: 683 VKSDVFSFGVLMLEILS 699
V SDV+SFGV++ E+ +
Sbjct: 196 VASDVWSFGVVLYELFT 212
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 91/197 (46%), Gaps = 28/197 (14%)
Query: 531 SKLGEGGFGPVYKGRLL-----NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVR 585
+LG+G FG V R G+ VAVK+L + + + L++F+ E+ ++ LQH N+V+
Sbjct: 23 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 82
Query: 586 LLGCCIEQGEK--ILIYEYMVNKSLDVFLFDPTKK--HLLGWQLRVRIIDG--------- 632
G C G + LI EY+ SL +L ++ H+ Q +I G
Sbjct: 83 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 142
Query: 633 ---------IAQDQHMNPKISDFGMARMFGGDELQGNTKRI-VGTYGYMSPEYALEGVFS 682
I + KI DFG+ ++ D+ K + +PE E FS
Sbjct: 143 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFS 202
Query: 683 VKSDVFSFGVLMLEILS 699
V SDV+SFGV++ E+ +
Sbjct: 203 VASDVWSFGVVLYELFT 219
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 91/197 (46%), Gaps = 28/197 (14%)
Query: 531 SKLGEGGFGPVYKGRLL-----NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVR 585
+LG+G FG V R G+ VAVK+L + + + L++F+ E+ ++ LQH N+V+
Sbjct: 22 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 81
Query: 586 LLGCCIEQGEK--ILIYEYMVNKSLDVFLFDPTKK--HLLGWQLRVRIIDG--------- 632
G C G + LI EY+ SL +L ++ H+ Q +I G
Sbjct: 82 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 141
Query: 633 ---------IAQDQHMNPKISDFGMARMFGGDELQGNTKRI-VGTYGYMSPEYALEGVFS 682
I + KI DFG+ ++ D+ K + +PE E FS
Sbjct: 142 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFS 201
Query: 683 VKSDVFSFGVLMLEILS 699
V SDV+SFGV++ E+ +
Sbjct: 202 VASDVWSFGVVLYELFT 218
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 110/271 (40%), Gaps = 42/271 (15%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
++ + +LG G FG V G+ +VA+K + S EF E ++ L H LV
Sbjct: 9 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLV 67
Query: 585 RLLGCCIEQGEKILIYEYMVNKSLDVFLFDP-----------------------TKKHLL 621
+L G C +Q +I EYM N L +L + K L
Sbjct: 68 QLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFL 127
Query: 622 GWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVF 681
L R + + DQ + K+SDFG++R DE + + PE + F
Sbjct: 128 HRDLAAR--NCLVNDQGV-VKVSDFGLSRYVLDDEYTSSRGSKFPV-RWSPPEVLMYSKF 183
Query: 682 SVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSL 741
S KSD+++FGVLM EI S K T+S A L L P L +E
Sbjct: 184 SSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL-------RLYRPHLASE--- 233
Query: 742 PMLVRYINVALLCVQENAEDRPTMSDVVSMI 772
+ + C E A++RPT ++S I
Sbjct: 234 ----KVYTIMYSCWHEKADERPTFKILLSNI 260
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 96/199 (48%), Gaps = 30/199 (15%)
Query: 526 NFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
+ +++ KLG G +G VY G VAVK L + + ++EF E ++ +++H NLV
Sbjct: 33 DITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 91
Query: 585 RLLGCCIEQGEKILIYEYMVNKSL--------------DVFLFDPT----------KKHL 620
+LLG C + ++ EYM +L V L+ T KK+
Sbjct: 92 QLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKKNF 151
Query: 621 LGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGV 680
+ L R + + + H+ K++DFG++R+ GD + + +PE
Sbjct: 152 IHRDLAAR--NCLVGENHVV-KVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNT 207
Query: 681 FSVKSDVFSFGVLMLEILS 699
FS+KSDV++FGVL+ EI +
Sbjct: 208 FSIKSDVWAFGVLLWEIAT 226
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 119/273 (43%), Gaps = 47/273 (17%)
Query: 526 NFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSN---QSGQGLKEFKNEMMLIAKLQHR 581
NF I+ K+G G F VY+ LL+G VA+K++ + + E+ L+ +L H
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 582 NLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLL-----GWQLRVRIIDGIAQD 636
N+++ IE E ++ E L + K+ L W+ V++ +
Sbjct: 93 NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSAL--- 149
Query: 637 QHMNP---------------------KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEY 675
+HM+ K+ D G+ R F ++ +VGT YMSPE
Sbjct: 150 EHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHS--LVGTPYYMSPER 207
Query: 676 ALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVL 735
E ++ KSD++S G L+ E+ + + + D NL +SLCK + + P L
Sbjct: 208 IHENGYNFKSDIWSLGCLLYEMAALQ---SPFYGDKMNL----YSLCK--KIEQCDYPPL 258
Query: 736 QNEVSLPMLVRYINVALLCVQENAEDRPTMSDV 768
++ L + +N +C+ + E RP ++ V
Sbjct: 259 PSDHYSEELRQLVN---MCINPDPEKRPDVTYV 288
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 121/280 (43%), Gaps = 44/280 (15%)
Query: 527 FSIQSKLGEGGFGPVYKGRL-LNGQE---VAVKRL-SNQSGQGLKEFKNEMMLIAKLQHR 581
I+ +G G FG V GRL + G+ VA+K L + + + ++F +E ++ + H
Sbjct: 16 IKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHP 75
Query: 582 NLVRLLGCCIEQGEKILIYEYMVNKSLDVFL------------------FDPTKKHL--L 621
N++ L G + ++I EYM N SLD FL K+L +
Sbjct: 76 NIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDM 135
Query: 622 GWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGT-YGYMSPEYALEGV 680
+ R I + ++ K+SDFGM+R+ D T R + +PE
Sbjct: 136 SYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRK 195
Query: 681 FSVKSDVFSFGVLMLEILSSKKNT--GVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNE 738
F+ SDV+S+G++M E++S + + N D + + L P +
Sbjct: 196 FTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRL----------PPPMDCP 245
Query: 739 VSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFN 778
++L L+ L C Q+ DRP +V+M++ + N
Sbjct: 246 IALHQLM------LDCWQKERSDRPKFGQIVNMLDKLIRN 279
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 91/197 (46%), Gaps = 28/197 (14%)
Query: 531 SKLGEGGFGPVYKGRLL-----NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVR 585
+LG+G FG V R G+ VAVK+L + + + L++F+ E+ ++ LQH N+V+
Sbjct: 34 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 93
Query: 586 LLGCCIEQGEK--ILIYEYMVNKSLDVFLFDPTKK--HLLGWQLRVRIIDG--------- 632
G C G + LI EY+ SL +L ++ H+ Q +I G
Sbjct: 94 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 153
Query: 633 ---------IAQDQHMNPKISDFGMARMFGGDELQGNTKRI-VGTYGYMSPEYALEGVFS 682
I + KI DFG+ ++ D+ K + +PE E FS
Sbjct: 154 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFS 213
Query: 683 VKSDVFSFGVLMLEILS 699
V SDV+SFGV++ E+ +
Sbjct: 214 VASDVWSFGVVLYELFT 230
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 129/303 (42%), Gaps = 57/303 (18%)
Query: 515 FSFASVTAATENFS---------IQSKLGEGGFGPVYKGRL-LNGQE---VAVKRL-SNQ 560
F+F A F+ I+ +G G FG V GRL + G+ VA+K L +
Sbjct: 10 FTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGY 69
Query: 561 SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHL 620
+ + ++F +E ++ + H N++ L G + ++I EYM N SLD FL +
Sbjct: 70 TDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFT 129
Query: 621 LGWQLRVRIIDGIAQ----------------------DQHMNPKISDFGMARMFGGDELQ 658
+ QL V ++ GI + ++ K+SDFGM+R+ D
Sbjct: 130 V-IQL-VGMLRGIGSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEA 187
Query: 659 GNTKRIVGT-YGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNT--GVYNTDSFNLL 715
T R + +PE F+ SDV+S+G++M E++S + + N D +
Sbjct: 188 AYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAI 247
Query: 716 GHAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775
+ L P + ++L L+ L C Q+ DRP +V+M++
Sbjct: 248 EEGYRL----------PPPMDCPIALHQLM------LDCWQKERSDRPKFGQIVNMLDKL 291
Query: 776 LFN 778
+ N
Sbjct: 292 IRN 294
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 121/280 (43%), Gaps = 44/280 (15%)
Query: 527 FSIQSKLGEGGFGPVYKGRL-LNGQE---VAVKRL-SNQSGQGLKEFKNEMMLIAKLQHR 581
I+ +G G FG V GRL + G+ VA+K L + + + ++F +E ++ + H
Sbjct: 10 IKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHP 69
Query: 582 NLVRLLGCCIEQGEKILIYEYMVNKSLDVFL------------------FDPTKKHL--L 621
N++ L G + ++I EYM N SLD FL K+L +
Sbjct: 70 NIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDM 129
Query: 622 GWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGT-YGYMSPEYALEGV 680
+ R I + ++ K+SDFGM+R+ D T R + +PE
Sbjct: 130 SYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRK 189
Query: 681 FSVKSDVFSFGVLMLEILSSKKNT--GVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNE 738
F+ SDV+S+G++M E++S + + N D + + L P +
Sbjct: 190 FTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRL----------PPPMDCP 239
Query: 739 VSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFN 778
++L L+ L C Q+ DRP +V+M++ + N
Sbjct: 240 IALHQLM------LDCWQKERSDRPKFGQIVNMLDKLIRN 273
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 91/197 (46%), Gaps = 28/197 (14%)
Query: 531 SKLGEGGFGPVYKGRLL-----NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVR 585
+LG+G FG V R G+ VAVK+L + + + L++F+ E+ ++ LQH N+V+
Sbjct: 34 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 93
Query: 586 LLGCCIEQGEK--ILIYEYMVNKSLDVFLFDPTKK--HLLGWQLRVRIIDG--------- 632
G C G + LI EY+ SL +L ++ H+ Q +I G
Sbjct: 94 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 153
Query: 633 ---------IAQDQHMNPKISDFGMARMFGGDELQGNTKRI-VGTYGYMSPEYALEGVFS 682
I + KI DFG+ ++ D+ K + +PE E FS
Sbjct: 154 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFS 213
Query: 683 VKSDVFSFGVLMLEILS 699
V SDV+SFGV++ E+ +
Sbjct: 214 VASDVWSFGVVLYELFT 230
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 91/197 (46%), Gaps = 28/197 (14%)
Query: 531 SKLGEGGFGPVYKGRLL-----NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVR 585
+LG+G FG V R G+ VAVK+L + + + L++F+ E+ ++ LQH N+V+
Sbjct: 17 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 76
Query: 586 LLGCCIEQGEK--ILIYEYMVNKSLDVFLFDPTKK--HLLGWQLRVRIIDG--------- 632
G C G + LI EY+ SL +L ++ H+ Q +I G
Sbjct: 77 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 136
Query: 633 ---------IAQDQHMNPKISDFGMARMFGGDELQGNTKRI-VGTYGYMSPEYALEGVFS 682
I + KI DFG+ ++ D+ K + +PE E FS
Sbjct: 137 IHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFS 196
Query: 683 VKSDVFSFGVLMLEILS 699
V SDV+SFGV++ E+ +
Sbjct: 197 VASDVWSFGVVLYELFT 213
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 96/224 (42%), Gaps = 49/224 (21%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLN------GQEVAVKRLSNQSGQGLKEFKNEMMLIAKL 578
+ ++ +LGEG FG V+ N VAVK L + + K+F+ E L+ L
Sbjct: 15 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNL 74
Query: 579 QHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLF------------DPTK-KHLLGWQL 625
QH ++V+ G C + I+++EYM + L+ FL P + K LG
Sbjct: 75 QHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQ 134
Query: 626 RVRIIDGIAQ------DQH----------------MNPKISDFGMARMFGGDELQGNTKR 663
+ I IA QH + KI DFGM+R D + R
Sbjct: 135 MLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSR----DVYSTDYYR 190
Query: 664 IVG----TYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKN 703
+ G +M PE + F+ +SDV+SFGV++ EI + K
Sbjct: 191 VGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQ 234
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 126/293 (43%), Gaps = 60/293 (20%)
Query: 521 TAATENFSIQSKLGEGGFGPVYKGRLLNGQE-VAVKRLSNQSGQG-------LKEFKNEM 572
T A + ++G+GGFG V+KGRL+ + VA+K L +G +EF+ E+
Sbjct: 15 TLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREV 74
Query: 573 MLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVR---- 628
+++ L H N+V+L G ++ E++ L L D K H + W +++R
Sbjct: 75 FIMSNLNHPNIVKLYGLM--HNPPRMVMEFVPCGDLYHRLLD--KAHPIKWSVKLRLMLD 130
Query: 629 IIDGIAQDQHMNP-------------------------KISDFGMARMFGGDELQGNTKR 663
I GI Q+ NP K++DFG+++ + +
Sbjct: 131 IALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ-----QSVHSVSG 185
Query: 664 IVGTYGYMSPEY--ALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSL 721
++G + +M+PE A E ++ K+D +SF +++ IL+ + Y+ +
Sbjct: 186 LLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFI------ 239
Query: 722 CKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774
N E + P + + R NV LC + + RP S +V ++
Sbjct: 240 --NMIREEGLRPTIPEDCP----PRLRNVIELCWSGDPKKRPHFSYIVKELSE 286
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 91/196 (46%), Gaps = 28/196 (14%)
Query: 532 KLGEGGFGPVYKGRLL-----NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRL 586
+LG+G FG V R G+ VAVK+L + + + L++F+ E+ ++ LQH N+V+
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 587 LGCCIEQGEK--ILIYEYMVNKSLDVFLFDPTKK--HLLGWQLRVRIIDG---------- 632
G C G + LI E++ SL +L ++ H+ Q +I G
Sbjct: 80 KGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYI 139
Query: 633 --------IAQDQHMNPKISDFGMARMFGGDELQGNTKRI-VGTYGYMSPEYALEGVFSV 683
I + KI DFG+ ++ D+ K + +PE E FSV
Sbjct: 140 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSV 199
Query: 684 KSDVFSFGVLMLEILS 699
SDV+SFGV++ E+ +
Sbjct: 200 ASDVWSFGVVLYELFT 215
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 121/279 (43%), Gaps = 55/279 (19%)
Query: 530 QSKLGEGGFGPVYKGRLLNG---QEVAVKRLSNQSGQGLKE---FKNEMMLIAKLQHRNL 583
Q +G G FG VYKG L +EV V + ++G K+ F E ++ + H N+
Sbjct: 49 QKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNI 108
Query: 584 VRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ-------- 635
+RL G + ++I EYM N +LD FL + + + QL V ++ GIA
Sbjct: 109 IRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSV-LQL-VGMLRGIAAGMKYLANM 166
Query: 636 --------------DQHMNPKISDFGMARMFGGD-ELQGNTKRIVGTYGYMSPEYALEGV 680
+ ++ K+SDFG++R+ D E T + +PE
Sbjct: 167 NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRK 226
Query: 681 FSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPV-----L 735
F+ SDV+SFG++M E+++ Y + W L HE+M + L
Sbjct: 227 FTSASDVWSFGIVMWEVMT-------YGERPY------WELSN----HEVMKAINDGFRL 269
Query: 736 QNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774
+ P + + + C Q+ RP +D+VS+++
Sbjct: 270 PTPMDCPSAI--YQLMMQCWQQERARRPKFADIVSILDK 306
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 118/273 (43%), Gaps = 52/273 (19%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
E+ ++ KLG G FG V+ +VAVK + S ++ F E ++ LQH LV
Sbjct: 182 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLV 240
Query: 585 RLLGCCIEQGEKILIYEYMVNKSLDVFL-FDPTKKHLLG--WQLRVRIIDGIAQDQHMNP 641
+L ++ I I E+M SL FL D K L +I +G+A + N
Sbjct: 241 KLHAVVTKEPIYI-ITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNY 299
Query: 642 ------------------KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSV 683
KI+DFG+AR+ ++ + +PE G F++
Sbjct: 300 IHRDLRAANILVSASLVCKIADFGLARVGAKFPIK-----------WTAPEAINFGSFTI 348
Query: 684 KSDVFSFGVLMLEILSSKK--NTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSL 741
KSDV+SFG+L++EI++ + G+ N + L + + + + E +
Sbjct: 349 KSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEEL---------- 398
Query: 742 PMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774
N+ + C + E+RPT + S++++
Sbjct: 399 ------YNIMMRCWKNRPEERPTFEYIQSVLDD 425
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 129/296 (43%), Gaps = 41/296 (13%)
Query: 514 LFSFASVTAATENFSIQSKLGEGGFGPVYKGRL-LNGQE---VAVKRLS-NQSGQGLKEF 568
+ FA AT N SI +G G FG V GRL L ++ VA+K L + + ++F
Sbjct: 6 VHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 64
Query: 569 KNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFL---------------- 612
E ++ + H N++RL G + +++ E M N SLD FL
Sbjct: 65 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGML 124
Query: 613 --FDPTKKHL--LGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGT- 667
K+L +G+ R I + ++ K+SDFG++R+ D T R
Sbjct: 125 RGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 184
Query: 668 YGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRA 727
+ SPE F+ SDV+S+G+++ E++S Y + + + + D
Sbjct: 185 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS-------YGERPYWEMSNQDVIKAVDEG 237
Query: 728 HELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFNLPSPK 783
+ L P + +L L+ L C Q++ +RP +VS+++ + N S K
Sbjct: 238 YRL-PPPMDCPAALYQLM------LDCWQKDRNNRPKFEQIVSILDKLIRNPGSLK 286
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 91/197 (46%), Gaps = 28/197 (14%)
Query: 531 SKLGEGGFGPVYKGRLL-----NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVR 585
+LG+G FG V R G+ VAVK+L + + + L++F+ E+ ++ LQH N+V+
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 586 LLGCCIEQGEK--ILIYEYMVNKSLDVFLFDPTKK--HLLGWQLRVRIIDG--------- 632
G C G + LI EY+ SL +L ++ H+ Q +I G
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 135
Query: 633 ---------IAQDQHMNPKISDFGMARMFGGDELQGNTKRI-VGTYGYMSPEYALEGVFS 682
I + KI DFG+ ++ D+ K + +PE E FS
Sbjct: 136 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFS 195
Query: 683 VKSDVFSFGVLMLEILS 699
V SDV+SFGV++ E+ +
Sbjct: 196 VASDVWSFGVVLYELFT 212
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 129/296 (43%), Gaps = 41/296 (13%)
Query: 514 LFSFASVTAATENFSIQSKLGEGGFGPVYKGRL-LNGQE---VAVKRLS-NQSGQGLKEF 568
+ FA AT N SI +G G FG V GRL L ++ VA+K L + + ++F
Sbjct: 35 VHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 569 KNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFL---------------- 612
E ++ + H N++RL G + +++ E M N SLD FL
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGML 153
Query: 613 --FDPTKKHL--LGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGT- 667
K+L +G+ R I + ++ K+SDFG++R+ D T R
Sbjct: 154 RGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
Query: 668 YGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRA 727
+ SPE F+ SDV+S+G+++ E++S Y + + + + D
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS-------YGERPYWEMSNQDVIKAVDEG 266
Query: 728 HELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFNLPSPK 783
+ L P + +L L+ L C Q++ +RP +VS+++ + N S K
Sbjct: 267 YRL-PPPMDCPAALYQLM------LDCWQKDRNNRPKFEQIVSILDKLIRNPGSLK 315
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 125/293 (42%), Gaps = 60/293 (20%)
Query: 521 TAATENFSIQSKLGEGGFGPVYKGRLLNGQE-VAVKRLSNQSGQG-------LKEFKNEM 572
T A + ++G+GGFG V+KGRL+ + VA+K L +G +EF+ E+
Sbjct: 15 TLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREV 74
Query: 573 MLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVR---- 628
+++ L H N+V+L G ++ E++ L L D K H + W +++R
Sbjct: 75 FIMSNLNHPNIVKLYGLM--HNPPRMVMEFVPCGDLYHRLLD--KAHPIKWSVKLRLMLD 130
Query: 629 IIDGIAQDQHMNP-------------------------KISDFGMARMFGGDELQGNTKR 663
I GI Q+ NP K++DFG ++ + +
Sbjct: 131 IALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ-----QSVHSVSG 185
Query: 664 IVGTYGYMSPEY--ALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSL 721
++G + +M+PE A E ++ K+D +SF +++ IL+ + Y+ +
Sbjct: 186 LLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFI------ 239
Query: 722 CKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774
N E + P + + R NV LC + + RP S +V ++
Sbjct: 240 --NMIREEGLRPTIPEDCP----PRLRNVIELCWSGDPKKRPHFSYIVKELSE 286
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 132/300 (44%), Gaps = 49/300 (16%)
Query: 514 LFSFASVTAATENFSIQSKLGEGGFGPVYKGRL-LNGQE---VAVKRLS-NQSGQGLKEF 568
+ FA AT N SI +G G FG V GRL L ++ VA+K L + + ++F
Sbjct: 35 VHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 569 KNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQL--R 626
E ++ + H N++RL G + +++ E M N SLD FL +KH + +
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL----RKHDAQFTVIQL 149
Query: 627 VRIIDGIAQ----------------------DQHMNPKISDFGMARMFGGDELQGNTKRI 664
V ++ GIA + ++ K+SDFG++R+ D T R
Sbjct: 150 VGMLRGIASGMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 209
Query: 665 VGT-YGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCK 723
+ SPE F+ SDV+S+G+++ E++S Y + + + +
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS-------YGERPYWEMSNQDVIKA 262
Query: 724 NDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFNLPSPK 783
D + L P + +L L+ L C Q++ +RP +VS+++ + N S K
Sbjct: 263 VDEGYRL-PPPMDCPAALYQLM------LDCWQKDRNNRPKFEQIVSILDKLIRNPGSLK 315
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 125/293 (42%), Gaps = 60/293 (20%)
Query: 521 TAATENFSIQSKLGEGGFGPVYKGRLLNGQE-VAVKRLSNQSGQG-------LKEFKNEM 572
T A + ++G+GGFG V+KGRL+ + VA+K L +G +EF+ E+
Sbjct: 15 TLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREV 74
Query: 573 MLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVR---- 628
+++ L H N+V+L G ++ E++ L L D K H + W +++R
Sbjct: 75 FIMSNLNHPNIVKLYGLM--HNPPRMVMEFVPCGDLYHRLLD--KAHPIKWSVKLRLMLD 130
Query: 629 IIDGIAQDQHMNP-------------------------KISDFGMARMFGGDELQGNTKR 663
I GI Q+ NP K++DF +++ + +
Sbjct: 131 IALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ-----QSVHSVSG 185
Query: 664 IVGTYGYMSPEY--ALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSL 721
++G + +M+PE A E ++ K+D +SF +++ IL+ + Y+ +
Sbjct: 186 LLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFI------ 239
Query: 722 CKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774
N E + P + + R NV LC + + RP S +V ++
Sbjct: 240 --NMIREEGLRPTIPEDCP----PRLRNVIELCWSGDPKKRPHFSYIVKELSE 286
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 120/279 (43%), Gaps = 42/279 (15%)
Query: 527 FSIQSKLGEGGFGPVYKGRL-LNGQE---VAVKRLS-NQSGQGLKEFKNEMMLIAKLQHR 581
+I+ +G G FG V GRL L G+ VA+K L + + ++F E ++ + H
Sbjct: 24 ITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 83
Query: 582 NLVRLLGCCIEQGEKILIYEYMVNKSLDVFL------------------FDPTKKHL--L 621
N++ L G + +++ EYM N SLD FL K+L +
Sbjct: 84 NIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLSDM 143
Query: 622 GWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGT-YGYMSPEYALEGV 680
G+ R I + ++ K+SDFG++R+ D T R + +PE
Sbjct: 144 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRK 203
Query: 681 FSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPV-LQNEV 739
F+ SDV+S+G++M E++S Y + W + D + + L + +
Sbjct: 204 FTSASDVWSYGIVMWEVVS-------YGERPY------WEMTNQDVIKAVEEGYRLPSPM 250
Query: 740 SLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFN 778
P + + L C Q+ RP ++V+M++ + N
Sbjct: 251 DCPAAL--YQLMLDCWQKERNSRPKFDEIVNMLDKLIRN 287
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 92/197 (46%), Gaps = 31/197 (15%)
Query: 533 LGEGGFGPVYKGRLL-----NGQEVAVKRLSNQSG-QGLKEFKNEMMLIAKLQHRNLVRL 586
LGEG FG V R G++VAVK L +SG + + K E+ ++ L H N+V+
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 587 LGCCIEQGEK--ILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRI-----IDGIAQDQHM 639
G C E G LI E++ + SL +L K L QL+ + +D + Q++
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYV 148
Query: 640 NP---------------KISDFGMARMFGGDELQGNTK--RIVGTYGYMSPEYALEGVFS 682
+ KI DFG+ + D+ K R + Y +PE ++ F
Sbjct: 149 HRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-APECLMQSKFY 207
Query: 683 VKSDVFSFGVLMLEILS 699
+ SDV+SFGV + E+L+
Sbjct: 208 IASDVWSFGVTLHELLT 224
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 95/214 (44%), Gaps = 43/214 (20%)
Query: 526 NFSIQSKLGEGGFGPVYKGRLLN-GQE-----VAVKRLSNQSGQGLKE-FKNEMMLIAKL 578
N LG G FG V + G+E VAVK L + + KE +E+ +++ L
Sbjct: 39 NLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHL 98
Query: 579 -QHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLL---GWQLRVR------ 628
QH N+V LLG C G ++I EY L FL + L G L +R
Sbjct: 99 GQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFS 158
Query: 629 --IIDGIAQDQHMN------------------PKISDFGMARMFGGDE---LQGNTKRIV 665
+ G+A N KI DFG+AR D ++GN + V
Sbjct: 159 SQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 218
Query: 666 GTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS 699
+M+PE + V++V+SDV+S+G+L+ EI S
Sbjct: 219 K---WMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 92/197 (46%), Gaps = 31/197 (15%)
Query: 533 LGEGGFGPVYKGRLL-----NGQEVAVKRLSNQSG-QGLKEFKNEMMLIAKLQHRNLVRL 586
LGEG FG V R G++VAVK L +SG + + K E+ ++ L H N+V+
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 587 LGCCIEQGEK--ILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRI-----IDGIAQDQHM 639
G C E G LI E++ + SL +L K L QL+ + +D + Q++
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYV 136
Query: 640 NP---------------KISDFGMARMFGGDELQGNTK--RIVGTYGYMSPEYALEGVFS 682
+ KI DFG+ + D+ K R + Y +PE ++ F
Sbjct: 137 HRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-APECLMQSKFY 195
Query: 683 VKSDVFSFGVLMLEILS 699
+ SDV+SFGV + E+L+
Sbjct: 196 IASDVWSFGVTLHELLT 212
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 93/201 (46%), Gaps = 34/201 (16%)
Query: 529 IQSKLGEGGFGPVYKGRL-LNGQE---VAVKRL-SNQSGQGLKEFKNEMMLIAKLQHRNL 583
I+ +G G G V GRL + GQ VA+K L + + + ++F +E ++ + H N+
Sbjct: 53 IEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNI 112
Query: 584 VRLLGCCIEQGEKILIYEYMVNKSLDVFL------------------FDPTKKHL--LGW 623
+RL G +++ EYM N SLD FL ++L LG+
Sbjct: 113 IRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGY 172
Query: 624 QLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYG-----YMSPEYALE 678
R + D ++ K+SDFG++R+ D T T G + +PE
Sbjct: 173 VHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTT----TGGKIPIRWTAPEAIAF 228
Query: 679 GVFSVKSDVFSFGVLMLEILS 699
FS SDV+SFGV+M E+L+
Sbjct: 229 RTFSSASDVWSFGVVMWEVLA 249
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 95/214 (44%), Gaps = 43/214 (20%)
Query: 526 NFSIQSKLGEGGFGPVYKGRLLN-GQE-----VAVKRLSNQSGQGLKE-FKNEMMLIAKL 578
N LG G FG V + G+E VAVK L + + KE +E+ +++ L
Sbjct: 47 NLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHL 106
Query: 579 -QHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLL---GWQLRVR------ 628
QH N+V LLG C G ++I EY L FL + L G L +R
Sbjct: 107 GQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFS 166
Query: 629 --IIDGIAQDQHMN------------------PKISDFGMARMFGGDE---LQGNTKRIV 665
+ G+A N KI DFG+AR D ++GN + V
Sbjct: 167 SQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 226
Query: 666 GTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS 699
+M+PE + V++V+SDV+S+G+L+ EI S
Sbjct: 227 K---WMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 104/213 (48%), Gaps = 33/213 (15%)
Query: 533 LGEGGFGPVYKGRLLNGQE-----VAVKRLSNQSG-QGLKEFKNEMMLIAKLQHRNLVRL 586
LG G FG VYKG + E VA+K L+ +G + EF +E +++A + H +LVRL
Sbjct: 46 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 105
Query: 587 LGCCIEQGEKILIYEYMVNKSLDVFLFDPT----KKHLLGWQLRV----------RIIDG 632
LG C+ + L+ + M + L ++ + + LL W +++ R++
Sbjct: 106 LGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHR 164
Query: 633 --------IAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVK 684
+ H+ KI+DFG+AR+ GDE + N +M+ E F+ +
Sbjct: 165 DLAARNVLVKSPNHV--KITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQ 222
Query: 685 SDVFSFGVLMLEILS--SKKNTGVYNTDSFNLL 715
SDV+S+GV + E+++ K G+ + +LL
Sbjct: 223 SDVWSYGVTIWELMTFGGKPYDGIPTREIPDLL 255
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 107/211 (50%), Gaps = 29/211 (13%)
Query: 533 LGEGGFGPVYKGRLLNGQE-----VAVKRLSNQSG-QGLKEFKNEMMLIAKLQHRNLVRL 586
LG G FG VYKG + E VA+K L+ +G + EF +E +++A + H +LVRL
Sbjct: 23 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 82
Query: 587 LGCCIEQGEKILIYEYMVNKSLDVFLFDPT----KKHLLGWQLRV----------RII-- 630
LG C+ + L+ + M + L ++ + + LL W +++ R++
Sbjct: 83 LGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHR 141
Query: 631 DGIAQDQHM----NPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSD 686
D A++ + + KI+DFG+AR+ GDE + N +M+ E F+ +SD
Sbjct: 142 DLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSD 201
Query: 687 VFSFGVLMLEILS--SKKNTGVYNTDSFNLL 715
V+S+GV + E+++ K G+ + +LL
Sbjct: 202 VWSYGVTIWELMTFGGKPYDGIPTREIPDLL 232
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 93/201 (46%), Gaps = 34/201 (16%)
Query: 529 IQSKLGEGGFGPVYKGRL-LNGQE---VAVKRL-SNQSGQGLKEFKNEMMLIAKLQHRNL 583
I+ +G G G V GRL + GQ VA+K L + + + ++F +E ++ + H N+
Sbjct: 53 IEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNI 112
Query: 584 VRLLGCCIEQGEKILIYEYMVNKSLDVFL------------------FDPTKKHL--LGW 623
+RL G +++ EYM N SLD FL ++L LG+
Sbjct: 113 IRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGY 172
Query: 624 QLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYG-----YMSPEYALE 678
R + D ++ K+SDFG++R+ D T T G + +PE
Sbjct: 173 VHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTT----TGGKIPIRWTAPEAIAF 228
Query: 679 GVFSVKSDVFSFGVLMLEILS 699
FS SDV+SFGV+M E+L+
Sbjct: 229 RTFSSASDVWSFGVVMWEVLA 249
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 125/300 (41%), Gaps = 76/300 (25%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRL--LNGQE----VAVKRL-SNQSGQGLKEFKNEMMLIAK 577
+N + LGEG FG V K L G+ VAVK L N S L++ +E ++ +
Sbjct: 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQ 82
Query: 578 LQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFD----------------------P 615
+ H ++++L G C + G +LI EY SL FL + P
Sbjct: 83 VNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHP 142
Query: 616 TKKHL-------LGWQL--------RVRIIDG--------IAQDQHMNPKISDFGMARMF 652
++ L WQ+ ++++ +A+ + M KISDFG++R
Sbjct: 143 DERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKM--KISDFGLSRDV 200
Query: 653 GGDELQGNTKRIVGT--YGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKN--TGVYN 708
E KR G +M+ E + +++ +SDV+SFGVL+ EI++ N G+
Sbjct: 201 Y--EEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP 258
Query: 709 TDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDV 768
FNLL + + D E M + L C ++ + RP +D+
Sbjct: 259 ERLFNLLKTGHRMERPDNCSEEM----------------YRLMLQCWKQEPDKRPVFADI 302
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 125/300 (41%), Gaps = 76/300 (25%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRL--LNGQE----VAVKRL-SNQSGQGLKEFKNEMMLIAK 577
+N + LGEG FG V K L G+ VAVK L N S L++ +E ++ +
Sbjct: 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQ 82
Query: 578 LQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFD----------------------P 615
+ H ++++L G C + G +LI EY SL FL + P
Sbjct: 83 VNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHP 142
Query: 616 TKKHL-------LGWQL--------RVRIIDG--------IAQDQHMNPKISDFGMARMF 652
++ L WQ+ ++++ +A+ + M KISDFG++R
Sbjct: 143 DERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKM--KISDFGLSRDV 200
Query: 653 GGDELQGNTKRIVGT--YGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKN--TGVYN 708
E KR G +M+ E + +++ +SDV+SFGVL+ EI++ N G+
Sbjct: 201 Y--EEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP 258
Query: 709 TDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDV 768
FNLL + + D E M + L C ++ + RP +D+
Sbjct: 259 ERLFNLLKTGHRMERPDNCSEEM----------------YRLMLQCWKQEPDKRPVFADI 302
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 120/278 (43%), Gaps = 45/278 (16%)
Query: 533 LGEGGFG--------PVYKGRLLNGQEVAVKRLSNQSGQGLKE-FKNEMMLIAKLQHRNL 583
LGEG FG P G G+ VAVK L G L+ ++ E+ ++ L H ++
Sbjct: 17 LGEGHFGKVSLYCYDPTNDG---TGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHI 73
Query: 584 VRLLGCCIEQGEKI--LIYEYMVNKSLDVFLFDPTKKHLLGW-QLRV---RIIDGIA--Q 635
V+ GCC +QGEK L+ EY+ SL +L +H +G QL + +I +G+A
Sbjct: 74 VKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL----PRHCVGLAQLLLFAQQICEGMAYLH 129
Query: 636 DQHMNP----------------KISDFGMARMF-GGDELQGNTKRIVGTYGYMSPEYALE 678
QH KI DFG+A+ G E + + +PE E
Sbjct: 130 AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKE 189
Query: 679 GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMD--PVLQ 736
F SDV+SFGV + E+L+ + +T L+GH R EL++ L
Sbjct: 190 CKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQMTVLRLTELLERGERLP 249
Query: 737 NEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774
P + ++ C + A RPT ++V ++
Sbjct: 250 RPDRCPCEIYHLMKN--CWETEASFRPTFQNLVPILQT 285
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 120/278 (43%), Gaps = 45/278 (16%)
Query: 533 LGEGGFG--------PVYKGRLLNGQEVAVKRLSNQSGQGLKE-FKNEMMLIAKLQHRNL 583
LGEG FG P G G+ VAVK L G L+ ++ E+ ++ L H ++
Sbjct: 16 LGEGHFGKVSLYCYDPTNDG---TGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHI 72
Query: 584 VRLLGCCIEQGEKI--LIYEYMVNKSLDVFLFDPTKKHLLGW-QLRV---RIIDGIA--Q 635
V+ GCC +QGEK L+ EY+ SL +L +H +G QL + +I +G+A
Sbjct: 73 VKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL----PRHCVGLAQLLLFAQQICEGMAYLH 128
Query: 636 DQHMNP----------------KISDFGMARMF-GGDELQGNTKRIVGTYGYMSPEYALE 678
QH KI DFG+A+ G E + + +PE E
Sbjct: 129 AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKE 188
Query: 679 GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMD--PVLQ 736
F SDV+SFGV + E+L+ + +T L+GH R EL++ L
Sbjct: 189 CKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQMTVLRLTELLERGERLP 248
Query: 737 NEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774
P + ++ C + A RPT ++V ++
Sbjct: 249 RPDRCPCEIYHLMKN--CWETEASFRPTFQNLVPILQT 284
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 119/298 (39%), Gaps = 72/298 (24%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRL--LNGQE----VAVKRL-SNQSGQGLKEFKNEMMLIAK 577
+N + LGEG FG V K L G+ VAVK L N S L++ +E ++ +
Sbjct: 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQ 82
Query: 578 LQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFD----------------------P 615
+ H ++++L G C + G +LI EY SL FL + P
Sbjct: 83 VNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHP 142
Query: 616 TKKHL-------LGWQL--------------RVRIIDGIAQDQHMNPKISDFGMARMFGG 654
++ L WQ+ R I + KISDFG++R
Sbjct: 143 DERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVY- 201
Query: 655 DELQGNTKRIVGT--YGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKN--TGVYNTD 710
E KR G +M+ E + +++ +SDV+SFGVL+ EI++ N G+
Sbjct: 202 -EEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPER 260
Query: 711 SFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDV 768
FNLL + + D E M + L C ++ + RP +D+
Sbjct: 261 LFNLLKTGHRMERPDNCSEEM----------------YRLMLQCWKQEPDKRPVFADI 302
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 96/220 (43%), Gaps = 51/220 (23%)
Query: 526 NFSIQSKLGEGGFGPVYKGRLLN-GQE-----VAVKRLSNQSGQGLKE-FKNEMMLIAKL 578
N LG G FG V + G+E VAVK L + + KE +E+ +++ L
Sbjct: 47 NLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHL 106
Query: 579 -QHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFL--------FDP---------TKKHL 620
QH N+V LLG C G ++I EY L FL DP + + L
Sbjct: 107 GQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDL 166
Query: 621 LGWQLRVRIIDGIAQDQHMN------------------PKISDFGMARMFGGDE---LQG 659
L ++ G+A N KI DFG+AR D ++G
Sbjct: 167 L--HFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKG 224
Query: 660 NTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS 699
N + V +M+PE + V++V+SDV+S+G+L+ EI S
Sbjct: 225 NARLPVK---WMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 96/220 (43%), Gaps = 51/220 (23%)
Query: 526 NFSIQSKLGEGGFGPVYKGRLLN-GQE-----VAVKRLSNQSGQGLKE-FKNEMMLIAKL 578
N LG G FG V + G+E VAVK L + + KE +E+ +++ L
Sbjct: 47 NLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHL 106
Query: 579 -QHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFL--------FDP---------TKKHL 620
QH N+V LLG C G ++I EY L FL DP + + L
Sbjct: 107 GQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDL 166
Query: 621 LGWQLRVRIIDGIAQDQHMN------------------PKISDFGMARMFGGDE---LQG 659
L ++ G+A N KI DFG+AR D ++G
Sbjct: 167 L--HFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKG 224
Query: 660 NTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS 699
N + V +M+PE + V++V+SDV+S+G+L+ EI S
Sbjct: 225 NARLPVK---WMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 88/197 (44%), Gaps = 30/197 (15%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
+ + +G+G FG V G G +VAVK + N + + F E ++ +L+H NLV
Sbjct: 12 KELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLV 68
Query: 585 RLLGCCIEQ-GEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQDQHMN--- 640
+LLG +E+ G ++ EYM SL +L + L G L +D +++
Sbjct: 69 QLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN 128
Query: 641 ------------------PKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFS 682
K+SDFG+ + + G + +PE E FS
Sbjct: 129 FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL-----PVKWTAPEALREAAFS 183
Query: 683 VKSDVFSFGVLMLEILS 699
KSDV+SFG+L+ EI S
Sbjct: 184 TKSDVWSFGILLWEIYS 200
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 127/299 (42%), Gaps = 73/299 (24%)
Query: 526 NFSIQSKLGEGGFGPVYKGRLLNG---QEVAVKRLSN-QSGQGLKEFKNEMMLIAKL-QH 580
+ Q +GEG FG V K R+ + A+KR+ S ++F E+ ++ KL H
Sbjct: 16 DIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHH 75
Query: 581 RNLVRLLGCCIEQGEKILIYEYMVNKSLDVFL-------FDP------------TKKHLL 621
N++ LLG C +G L EY + +L FL DP + + LL
Sbjct: 76 PNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLL 135
Query: 622 GWQLRV-RIIDGIAQDQHMN---------------PKISDFGMARMFGGDELQGNTKRIV 665
+ V R +D ++Q Q ++ KI+DFG++R G E+ K+ +
Sbjct: 136 HFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR---GQEVY--VKKTM 190
Query: 666 GTY--GYMSPEYALEGVFSVKSDVFSFGVLMLEILS--SKKNTGVYNTDSFNLLGHAWSL 721
G +M+ E V++ SDV+S+GVL+ EI+S G+ + + L + L
Sbjct: 191 GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRL 250
Query: 722 CK----NDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNEL 776
K +D ++LM C +E +RP+ + ++ +N L
Sbjct: 251 EKPLNCDDEVYDLMRQ--------------------CWREKPYERPSFAQILVSLNRML 289
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 127/299 (42%), Gaps = 73/299 (24%)
Query: 526 NFSIQSKLGEGGFGPVYKGRLLNG---QEVAVKRLSN-QSGQGLKEFKNEMMLIAKL-QH 580
+ Q +GEG FG V K R+ + A+KR+ S ++F E+ ++ KL H
Sbjct: 23 DIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHH 82
Query: 581 RNLVRLLGCCIEQGEKILIYEYMVNKSLDVFL-------FDP------------TKKHLL 621
N++ LLG C +G L EY + +L FL DP + + LL
Sbjct: 83 PNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLL 142
Query: 622 GWQLRV-RIIDGIAQDQ--HMN-------------PKISDFGMARMFGGDELQGNTKRIV 665
+ V R +D ++Q Q H N KI+DFG++R G E+ K+ +
Sbjct: 143 HFAADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSR---GQEVY--VKKTM 197
Query: 666 GTY--GYMSPEYALEGVFSVKSDVFSFGVLMLEILS--SKKNTGVYNTDSFNLLGHAWSL 721
G +M+ E V++ SDV+S+GVL+ EI+S G+ + + L + L
Sbjct: 198 GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRL 257
Query: 722 CK----NDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNEL 776
K +D ++LM C +E +RP+ + ++ +N L
Sbjct: 258 EKPLNCDDEVYDLMRQ--------------------CWREKPYERPSFAQILVSLNRML 296
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 128/288 (44%), Gaps = 58/288 (20%)
Query: 533 LGEGGFGPVYKGRLLNGQ----EVAVK--RLSNQSGQGLKEFKNEMMLIAKLQHRNLVRL 586
LGEG FG V +G L +VAVK +L N S + ++EF +E + H N++RL
Sbjct: 42 LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRL 101
Query: 587 LGCCIE---QG--EKILIYEYMVNKSLDVFL----FDPTKKHLLGWQLRVRIIDGIAQDQ 637
LG CIE QG + ++I +M L +L + KH+ L ++D +
Sbjct: 102 LGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGME 161
Query: 638 HMNPK---------------------ISDFGMA-RMFGGDEL-QGNTKRIVGTYGYMSPE 674
+++ + ++DFG++ +++ GD QG ++ +++ E
Sbjct: 162 YLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKM--PVKWIAIE 219
Query: 675 YALEGVFSVKSDVFSFGVLMLEILSSKKN--TGVYNTDSFNLLGHAWSLCKNDRAHELMD 732
+ V++ KSDV++FGV M EI + GV N + ++ L H H L
Sbjct: 220 SLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLH---------GHRLKQ 270
Query: 733 PVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFNLP 780
P E L L + C + + DRPT S + + L +LP
Sbjct: 271 P----EDCLDELY---EIMYSCWRTDPLDRPTFSVLRLQLEKLLESLP 311
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 97/222 (43%), Gaps = 53/222 (23%)
Query: 526 NFSIQSKLGEGGFGPVYKGRLLN-GQE-----VAVKRLSNQSGQGLKE-FKNEMMLIAKL 578
N LG G FG V + G+E VAVK L + + KE +E+ +++ L
Sbjct: 47 NLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHL 106
Query: 579 -QHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFL-----------FDPTKKHLLGWQLR 626
QH N+V LLG C G ++I EY L FL ++P+ H QL
Sbjct: 107 GQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPS--HNPEEQLS 164
Query: 627 VR--------IIDGIAQDQHMN------------------PKISDFGMARMFGGDE---L 657
R + G+A N KI DFG+AR D +
Sbjct: 165 SRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 224
Query: 658 QGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS 699
+GN + V +M+PE + V++V+SDV+S+G+L+ EI S
Sbjct: 225 KGNARLPVK---WMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 127/299 (42%), Gaps = 73/299 (24%)
Query: 526 NFSIQSKLGEGGFGPVYKGRLLNG---QEVAVKRLSN-QSGQGLKEFKNEMMLIAKL-QH 580
+ Q +GEG FG V K R+ + A+KR+ S ++F E+ ++ KL H
Sbjct: 26 DIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHH 85
Query: 581 RNLVRLLGCCIEQGEKILIYEYMVNKSLDVFL-------FDP------------TKKHLL 621
N++ LLG C +G L EY + +L FL DP + + LL
Sbjct: 86 PNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLL 145
Query: 622 GWQLRV-RIIDGIAQDQHMN---------------PKISDFGMARMFGGDELQGNTKRIV 665
+ V R +D ++Q Q ++ KI+DFG++R G E+ K+ +
Sbjct: 146 HFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR---GQEVY--VKKTM 200
Query: 666 GTY--GYMSPEYALEGVFSVKSDVFSFGVLMLEILS--SKKNTGVYNTDSFNLLGHAWSL 721
G +M+ E V++ SDV+S+GVL+ EI+S G+ + + L + L
Sbjct: 201 GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRL 260
Query: 722 CK----NDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNEL 776
K +D ++LM C +E +RP+ + ++ +N L
Sbjct: 261 EKPLNCDDEVYDLMRQ--------------------CWREKPYERPSFAQILVSLNRML 299
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 96/201 (47%), Gaps = 26/201 (12%)
Query: 525 ENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVK--RLSNQSGQGLKEFKNEMMLIAKLQHR 581
ENF K+GEG +G VYK R L G+ VA+K RL ++ E+ L+ +L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 582 NLVRLLGCCIEQGEKILIYEYM---VNKSLDV-------------FLFDPTKKHLLGWQL 625
N+V+LL + + L++E++ + K +D +LF +
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 626 RVRIIDGIAQDQHMNP----KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYAL-EGV 680
RV D Q+ +N K++DFG+AR FG ++ T +V T Y +PE L
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAPEILLGXKY 180
Query: 681 FSVKSDVFSFGVLMLEILSSK 701
+S D++S G + E+++ +
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRR 201
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 97/204 (47%), Gaps = 26/204 (12%)
Query: 522 AATENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVK--RLSNQSGQGLKEFKNEMMLIAKL 578
+ ENF K+GEG +G VYK R L G+ VA+K RL ++ E+ L+ +L
Sbjct: 1 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 579 QHRNLVRLLGCCIEQGEKILIYEYM---VNKSLDV-------------FLFDPTKKHLLG 622
H N+V+LL + + L++E++ + K +D +LF +
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 623 WQLRVRIIDGIAQDQHMNP----KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALE 678
RV D Q+ +N K++DFG+AR FG ++ T +V T Y +PE L
Sbjct: 121 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAPEILLG 178
Query: 679 -GVFSVKSDVFSFGVLMLEILSSK 701
+S D++S G + E+++ +
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 88/197 (44%), Gaps = 30/197 (15%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
+ + +G+G FG V G G +VAVK + N + + F E ++ +L+H NLV
Sbjct: 193 KELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLV 249
Query: 585 RLLGCCIEQ-GEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQDQHMN--- 640
+LLG +E+ G ++ EYM SL +L + L G L +D +++
Sbjct: 250 QLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN 309
Query: 641 ------------------PKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFS 682
K+SDFG+ + + G + +PE E FS
Sbjct: 310 FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL-----PVKWTAPEALREKKFS 364
Query: 683 VKSDVFSFGVLMLEILS 699
KSDV+SFG+L+ EI S
Sbjct: 365 TKSDVWSFGILLWEIYS 381
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 96/201 (47%), Gaps = 26/201 (12%)
Query: 525 ENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVK--RLSNQSGQGLKEFKNEMMLIAKLQHR 581
ENF K+GEG +G VYK R L G+ VA+K RL ++ E+ L+ +L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 582 NLVRLLGCCIEQGEKILIYEYM---VNKSLDV-------------FLFDPTKKHLLGWQL 625
N+V+LL + + L++E++ + K +D +LF +
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 626 RVRIIDGIAQDQHMNP----KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALE-GV 680
RV D Q+ +N K++DFG+AR FG ++ T +V T Y +PE L
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAPEILLGCKY 180
Query: 681 FSVKSDVFSFGVLMLEILSSK 701
+S D++S G + E+++ +
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRR 201
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 96/201 (47%), Gaps = 26/201 (12%)
Query: 525 ENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVK--RLSNQSGQGLKEFKNEMMLIAKLQHR 581
ENF K+GEG +G VYK R L G+ VA+K RL ++ E+ L+ +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 582 NLVRLLGCCIEQGEKILIYEYM---VNKSLDV-------------FLFDPTKKHLLGWQL 625
N+V+LL + + L++E++ + K +D +LF +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 626 RVRIIDGIAQDQHMNP----KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALE-GV 680
RV D Q+ +N K++DFG+AR FG ++ T +V T Y +PE L
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAPEILLGCKY 179
Query: 681 FSVKSDVFSFGVLMLEILSSK 701
+S D++S G + E+++ +
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRR 200
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 96/201 (47%), Gaps = 26/201 (12%)
Query: 525 ENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVK--RLSNQSGQGLKEFKNEMMLIAKLQHR 581
ENF K+GEG +G VYK R L G+ VA+K RL ++ E+ L+ +L H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 582 NLVRLLGCCIEQGEKILIYEYM---VNKSLDV-------------FLFDPTKKHLLGWQL 625
N+V+LL + + L++E++ + K +D +LF +
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 129
Query: 626 RVRIIDGIAQDQHMNP----KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYAL-EGV 680
RV D Q+ +N K++DFG+AR FG ++ T +V T Y +PE L
Sbjct: 130 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAPEILLGXKY 187
Query: 681 FSVKSDVFSFGVLMLEILSSK 701
+S D++S G + E+++ +
Sbjct: 188 YSTAVDIWSLGCIFAEMVTRR 208
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 108/243 (44%), Gaps = 51/243 (20%)
Query: 525 ENFSIQSKLGEGGFGPVY--------KGRLLNGQEVAVKRLSNQSGQ-GLKEFKNEMMLI 575
+ ++ LGEG FG V K + VAVK L + + + L + +EM ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 576 AKL-QHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFL-----------FDPTK------ 617
+ +H+N++ LLG C + G +I EY +L +L +D +
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 618 --KHLLG--WQLRVRIIDGIAQDQHMNP---------------KISDFGMARMFGGDELQ 658
K L+ +QL R ++ +A + ++ KI+DFG+AR +
Sbjct: 155 TFKDLVSCTYQL-ARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYY 213
Query: 659 GNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEI--LSSKKNTGVYNTDSFNLL- 715
NT +M+PE + V++ +SDV+SFGVLM EI L G+ + F LL
Sbjct: 214 KNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLK 273
Query: 716 -GH 717
GH
Sbjct: 274 EGH 276
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 96/201 (47%), Gaps = 26/201 (12%)
Query: 525 ENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVK--RLSNQSGQGLKEFKNEMMLIAKLQHR 581
ENF K+GEG +G VYK R L G+ VA+K RL ++ E+ L+ +L H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 582 NLVRLLGCCIEQGEKILIYEYM---VNKSLDV-------------FLFDPTKKHLLGWQL 625
N+V+LL + + L++E++ + K +D +LF +
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 126
Query: 626 RVRIIDGIAQDQHMNP----KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALE-GV 680
RV D Q+ +N K++DFG+AR FG ++ T +V T Y +PE L
Sbjct: 127 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAPEILLGCKY 184
Query: 681 FSVKSDVFSFGVLMLEILSSK 701
+S D++S G + E+++ +
Sbjct: 185 YSTAVDIWSLGCIFAEMVTRR 205
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 96/201 (47%), Gaps = 26/201 (12%)
Query: 525 ENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVK--RLSNQSGQGLKEFKNEMMLIAKLQHR 581
ENF K+GEG +G VYK R L G+ VA+K RL ++ E+ L+ +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 582 NLVRLLGCCIEQGEKILIYEYM---VNKSLDV-------------FLFDPTKKHLLGWQL 625
N+V+LL + + L++E++ + K +D +LF +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 626 RVRIIDGIAQDQHMNP----KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALE-GV 680
RV D Q+ +N K++DFG+AR FG ++ T +V T Y +PE L
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAPEILLGCKY 179
Query: 681 FSVKSDVFSFGVLMLEILSSK 701
+S D++S G + E+++ +
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRR 200
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 96/201 (47%), Gaps = 26/201 (12%)
Query: 525 ENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVK--RLSNQSGQGLKEFKNEMMLIAKLQHR 581
ENF K+GEG +G VYK R L G+ VA+K RL ++ E+ L+ +L H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 582 NLVRLLGCCIEQGEKILIYEYM---VNKSLDV-------------FLFDPTKKHLLGWQL 625
N+V+LL + + L++E++ + K +D +LF +
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 129
Query: 626 RVRIIDGIAQDQHMNP----KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALE-GV 680
RV D Q+ +N K++DFG+AR FG ++ T +V T Y +PE L
Sbjct: 130 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAPEILLGCKY 187
Query: 681 FSVKSDVFSFGVLMLEILSSK 701
+S D++S G + E+++ +
Sbjct: 188 YSTAVDIWSLGCIFAEMVTRR 208
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 96/201 (47%), Gaps = 26/201 (12%)
Query: 525 ENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVK--RLSNQSGQGLKEFKNEMMLIAKLQHR 581
ENF K+GEG +G VYK R L G+ VA+K RL ++ E+ L+ +L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 582 NLVRLLGCCIEQGEKILIYEYM---VNKSLDV-------------FLFDPTKKHLLGWQL 625
N+V+LL + + L++E++ + K +D +LF +
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 626 RVRIIDGIAQDQHMNP----KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALE-GV 680
RV D Q+ +N K++DFG+AR FG ++ T +V T Y +PE L
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAPEILLGCKY 180
Query: 681 FSVKSDVFSFGVLMLEILSSK 701
+S D++S G + E+++ +
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRR 201
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 88/197 (44%), Gaps = 30/197 (15%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
+ + +G+G FG V G G +VAVK + N + + F E ++ +L+H NLV
Sbjct: 6 KELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLV 62
Query: 585 RLLGCCIEQ-GEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQDQHMN--- 640
+LLG +E+ G ++ EYM SL +L + L G L +D +++
Sbjct: 63 QLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN 122
Query: 641 ------------------PKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFS 682
K+SDFG+ + + G + +PE E FS
Sbjct: 123 FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL-----PVKWTAPEALREKKFS 177
Query: 683 VKSDVFSFGVLMLEILS 699
KSDV+SFG+L+ EI S
Sbjct: 178 TKSDVWSFGILLWEIYS 194
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 99/205 (48%), Gaps = 34/205 (16%)
Query: 525 ENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVK--RLSNQSGQGLKEFKNEMMLIAKLQHR 581
ENF K+GEG +G VYK R L G+ VA+K RL ++ E+ L+ +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 582 NLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRV------RIIDGIA- 634
N+V+LL + + L++E+ V++ L F+ L G L + +++ G+A
Sbjct: 62 NIVKLLDVIHTENKLYLVFEH-VHQDLKTFM---DASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 635 ------QDQHMNP-----------KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYAL 677
+ + P K++DFG+AR FG ++ T +V T Y +PE L
Sbjct: 118 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAPEILL 175
Query: 678 E-GVFSVKSDVFSFGVLMLEILSSK 701
+S D++S G + E+++ +
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 96/201 (47%), Gaps = 26/201 (12%)
Query: 525 ENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVK--RLSNQSGQGLKEFKNEMMLIAKLQHR 581
ENF K+GEG +G VYK R L G+ VA+K RL ++ E+ L+ +L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 582 NLVRLLGCCIEQGEKILIYEYM---VNKSLDV-------------FLFDPTKKHLLGWQL 625
N+V+LL + + L++E++ + K +D +LF +
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSH 122
Query: 626 RVRIIDGIAQDQHMNP----KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALE-GV 680
RV D Q+ +N K++DFG+AR FG ++ T +V T Y +PE L
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAPEILLGCKY 180
Query: 681 FSVKSDVFSFGVLMLEILSSK 701
+S D++S G + E+++ +
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRR 201
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 108/221 (48%), Gaps = 33/221 (14%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLS-NQSGQGLKEFK-NEMMLIAKLQHRN 582
E + K+GEG +G VYK + G+ VA+KR+ + +G+ E+ L+ +L H N
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 583 LVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRV---RIIDGIAQ-DQH 638
+V L+ + L++E+M K L L D K L Q+++ +++ G+A QH
Sbjct: 81 IVSLIDVIHSERCLTLVFEFM-EKDLKKVL-DENKTGLQDSQIKIYLYQLLRGVAHCHQH 138
Query: 639 ------MNP-----------KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYAL-EGV 680
+ P K++DFG+AR F G ++ T +V T Y +P+ +
Sbjct: 139 RILHRDLKPQNLLINSDGALKLADFGLARAF-GIPVRSYTHEVV-TLWYRAPDVLMGSKK 196
Query: 681 FSVKSDVFSFGVLMLEILSSKK-NTGVYNTDS----FNLLG 716
+S D++S G + E+++ K GV + D F++LG
Sbjct: 197 YSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILG 237
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 108/221 (48%), Gaps = 33/221 (14%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLS-NQSGQGLKEFK-NEMMLIAKLQHRN 582
E + K+GEG +G VYK + G+ VA+KR+ + +G+ E+ L+ +L H N
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 583 LVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRV---RIIDGIAQ-DQH 638
+V L+ + L++E+M K L L D K L Q+++ +++ G+A QH
Sbjct: 81 IVSLIDVIHSERCLTLVFEFM-EKDLKKVL-DENKTGLQDSQIKIYLYQLLRGVAHCHQH 138
Query: 639 ------MNP-----------KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYAL-EGV 680
+ P K++DFG+AR F G ++ T +V T Y +P+ +
Sbjct: 139 RILHRDLKPQNLLINSDGALKLADFGLARAF-GIPVRSYTHEVV-TLWYRAPDVLMGSKK 196
Query: 681 FSVKSDVFSFGVLMLEILSSKK-NTGVYNTDS----FNLLG 716
+S D++S G + E+++ K GV + D F++LG
Sbjct: 197 YSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILG 237
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 119/278 (42%), Gaps = 45/278 (16%)
Query: 533 LGEGGFG--------PVYKGRLLNGQEVAVKRLSNQSG-QGLKEFKNEMMLIAKLQHRNL 583
LGEG FG P G G+ VAVK L G Q +K E+ ++ L H ++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDG---TGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHI 78
Query: 584 VRLLGCCIEQGEKI--LIYEYMVNKSLDVFLFDPTKKHLLGW-QLRV---RIIDGIA--Q 635
++ GCC +QGEK L+ EY+ SL +L +H +G QL + +I +G+A
Sbjct: 79 IKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL----PRHSIGLAQLLLFAQQICEGMAYLH 134
Query: 636 DQHMNP----------------KISDFGMARMFG-GDELQGNTKRIVGTYGYMSPEYALE 678
QH KI DFG+A+ G E + + +PE E
Sbjct: 135 SQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKE 194
Query: 679 GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMD--PVLQ 736
F SDV+SFGV + E+L+ ++ T L+G A R EL++ L
Sbjct: 195 YKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLP 254
Query: 737 NEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774
P V ++ C + A RPT +++ ++
Sbjct: 255 RPDKCPCEVYHLMKN--CWETEASFRPTFENLIPILKT 290
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 88/197 (44%), Gaps = 30/197 (15%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
+ + +G+G FG V G G +VAVK + N + + F E ++ +L+H NLV
Sbjct: 21 KELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLV 77
Query: 585 RLLGCCIEQ-GEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQDQHMN--- 640
+LLG +E+ G ++ EYM SL +L + L G L +D +++
Sbjct: 78 QLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN 137
Query: 641 ------------------PKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFS 682
K+SDFG+ + + G + +PE E FS
Sbjct: 138 FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL-----PVKWTAPEALREKKFS 192
Query: 683 VKSDVFSFGVLMLEILS 699
KSDV+SFG+L+ EI S
Sbjct: 193 TKSDVWSFGILLWEIYS 209
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 118/280 (42%), Gaps = 46/280 (16%)
Query: 529 IQSKLGEGGFGPVYKGRL-LNGQE---VAVKRL-SNQSGQGLKEFKNEMMLIAKLQHRNL 583
I+ +G G FG V G L L G+ VA+K L S + + ++F +E ++ + H N+
Sbjct: 11 IEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNV 70
Query: 584 VRLLGCCIEQGEKILIYEYMVNKSLDVFL------------------FDPTKKHL--LGW 623
+ L G + ++I E+M N SLD FL K+L + +
Sbjct: 71 IHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNY 130
Query: 624 QLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVG---TYGYMSPEYALEGV 680
R I + ++ K+SDFG++R D +G + +PE
Sbjct: 131 VHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRK 190
Query: 681 FSVKSDVFSFGVLMLEILS--SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNE 738
F+ SDV+S+G++M E++S + + N D N + + L P +
Sbjct: 191 FTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRL----------PPPMDCP 240
Query: 739 VSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFN 778
+L L+ L C Q++ RP +V+ ++ + N
Sbjct: 241 SALHQLM------LDCWQKDRNHRPKFGQIVNTLDKMIRN 274
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 119/278 (42%), Gaps = 45/278 (16%)
Query: 533 LGEGGFG--------PVYKGRLLNGQEVAVKRLSNQSG-QGLKEFKNEMMLIAKLQHRNL 583
LGEG FG P G G+ VAVK L G Q +K E+ ++ L H ++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDG---TGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHI 78
Query: 584 VRLLGCCIEQGEKI--LIYEYMVNKSLDVFLFDPTKKHLLGW-QLRV---RIIDGIA--Q 635
++ GCC +QGEK L+ EY+ SL +L +H +G QL + +I +G+A
Sbjct: 79 IKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL----PRHSIGLAQLLLFAQQICEGMAYLH 134
Query: 636 DQHMNP----------------KISDFGMARMFG-GDELQGNTKRIVGTYGYMSPEYALE 678
QH KI DFG+A+ G E + + +PE E
Sbjct: 135 AQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKE 194
Query: 679 GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMD--PVLQ 736
F SDV+SFGV + E+L+ ++ T L+G A R EL++ L
Sbjct: 195 YKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLP 254
Query: 737 NEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774
P V ++ C + A RPT +++ ++
Sbjct: 255 RPDKCPCEVYHLMKN--CWETEASFRPTFENLIPILKT 290
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 103/212 (48%), Gaps = 31/212 (14%)
Query: 533 LGEGGFGPVYKGRLLNGQE-----VAVKRLSNQ-SGQGLKEFKNEMMLIAKLQHRNLVRL 586
LG G FG VYKG + E VA+K L S + KE +E ++A + + ++ RL
Sbjct: 24 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 83
Query: 587 LGCCIEQGEKILIYEYMVNKSLDVFLFDPT---KKHLLGWQLRV----------RIIDG- 632
LG C+ ++++ LD ++LL W +++ R++
Sbjct: 84 LGICLTSTVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRD 143
Query: 633 -------IAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKS 685
+ QH+ KI+DFG+A++ G +E + + + +M+ E L +++ +S
Sbjct: 144 LAARNVLVKTPQHV--KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 201
Query: 686 DVFSFGVLMLEILS--SKKNTGVYNTDSFNLL 715
DV+S+GV + E+++ SK G+ ++ ++L
Sbjct: 202 DVWSYGVTVWELMTFGSKPYDGIPASEISSIL 233
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 106/219 (48%), Gaps = 45/219 (20%)
Query: 533 LGEGGFGPVYKGRLLNGQE-----VAVKRLSNQ-SGQGLKEFKNEMMLIAKLQHRNLVRL 586
LG G FG VYKG + E VA+K L S + KE +E ++A + + ++ RL
Sbjct: 27 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 86
Query: 587 LGCCIEQGEKILIYEYMVNKSLDVF--LFDPTKKH--------LLGWQLRV--------- 627
LG C+ ++++ L F L D ++H LL W +++
Sbjct: 87 LGICLTSTVQLIM-------QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 139
Query: 628 -RIIDG--------IAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALE 678
R++ + QH+ KI+DFG+A++ G +E + + + +M+ E L
Sbjct: 140 RRLVHRDLAARNVLVKTPQHV--KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 197
Query: 679 GVFSVKSDVFSFGVLMLEILS--SKKNTGVYNTDSFNLL 715
+++ +SDV+S+GV + E+++ SK G+ ++ ++L
Sbjct: 198 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 236
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 106/219 (48%), Gaps = 45/219 (20%)
Query: 533 LGEGGFGPVYKGRLLNGQE-----VAVKRLSNQ-SGQGLKEFKNEMMLIAKLQHRNLVRL 586
LG G FG VYKG + E VA+K L S + KE +E ++A + + ++ RL
Sbjct: 24 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 83
Query: 587 LGCCIEQGEKILIYEYMVNKSLDVF--LFDPTKKH--------LLGWQLRV--------- 627
LG C+ ++++ L F L D ++H LL W +++
Sbjct: 84 LGICLTSTVQLIM-------QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 136
Query: 628 -RIIDG--------IAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALE 678
R++ + QH+ KI+DFG+A++ G +E + + + +M+ E L
Sbjct: 137 RRLVHRDLAARNVLVKTPQHV--KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 194
Query: 679 GVFSVKSDVFSFGVLMLEILS--SKKNTGVYNTDSFNLL 715
+++ +SDV+S+GV + E+++ SK G+ ++ ++L
Sbjct: 195 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 233
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 106/219 (48%), Gaps = 45/219 (20%)
Query: 533 LGEGGFGPVYKGRLLNGQE-----VAVKRLSNQ-SGQGLKEFKNEMMLIAKLQHRNLVRL 586
LG G FG VYKG + E VA+K L S + KE +E ++A + + ++ RL
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 587 LGCCIEQGEKILIYEYMVNKSLDVF--LFDPTKKH--------LLGWQLRV--------- 627
LG C+ ++++ L F L D ++H LL W +++
Sbjct: 83 LGICLTSTVQLIM-------QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 135
Query: 628 -RIIDG--------IAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALE 678
R++ + QH+ KI+DFG+A++ G +E + + + +M+ E L
Sbjct: 136 RRLVHRDLAARNVLVKTPQHV--KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 193
Query: 679 GVFSVKSDVFSFGVLMLEILS--SKKNTGVYNTDSFNLL 715
+++ +SDV+S+GV + E+++ SK G+ ++ ++L
Sbjct: 194 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 232
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 105/217 (48%), Gaps = 41/217 (18%)
Query: 533 LGEGGFGPVYKGRLLNGQE-----VAVKRLSNQ-SGQGLKEFKNEMMLIAKLQHRNLVRL 586
LG G FG VYKG + E VA+K L S + KE +E ++A + + ++ RL
Sbjct: 17 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 76
Query: 587 LGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKH--------LLGWQLRV----------R 628
LG C+ + LI + M L D ++H LL W +++ R
Sbjct: 77 LGICLTSTVQ-LITQLMPFGCL----LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 131
Query: 629 IIDG--------IAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGV 680
++ + QH+ KI+DFG+A++ G +E + + + +M+ E L +
Sbjct: 132 LVHRDLAARNVLVKTPQHV--KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 189
Query: 681 FSVKSDVFSFGVLMLEILS--SKKNTGVYNTDSFNLL 715
++ +SDV+S+GV + E+++ SK G+ ++ ++L
Sbjct: 190 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 226
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 124/303 (40%), Gaps = 55/303 (18%)
Query: 515 FSFASVTAATENFS---------IQSKLGEGGFGPVYKGRL-LNGQE---VAVKRL-SNQ 560
F+F A F+ I+ +G G FG V G L L G+ VA+K L S
Sbjct: 14 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 73
Query: 561 SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFL-------- 612
+ + ++F +E ++ + H N++ L G + ++I E+M N SLD FL
Sbjct: 74 TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFT 133
Query: 613 ----------FDPTKKHL--LGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGN 660
K+L + + R I + ++ K+SDFG++R D
Sbjct: 134 VIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPT 193
Query: 661 TKRIVG---TYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNT--GVYNTDSFNLL 715
+G + +PE F+ SDV+S+G++M E++S + + N D N +
Sbjct: 194 YTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAI 253
Query: 716 GHAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775
+ L P + +L L+ L C Q++ RP +V+ ++
Sbjct: 254 EQDYRL----------PPPMDCPSALHQLM------LDCWQKDRNHRPKFGQIVNTLDKM 297
Query: 776 LFN 778
+ N
Sbjct: 298 IRN 300
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 107/243 (44%), Gaps = 51/243 (20%)
Query: 525 ENFSIQSKLGEGGFGPVY--------KGRLLNGQEVAVKRLSNQSGQ-GLKEFKNEMMLI 575
+ ++ LGEG FG V K + VAVK L + + + L + +EM ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 576 AKL-QHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFL-----------FDPTK------ 617
+ +H+N++ LLG C + G +I EY +L +L +D +
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 618 --KHLLG--WQLRVRIIDGIAQDQHMNP---------------KISDFGMARMFGGDELQ 658
K L+ +QL R ++ +A + ++ KI+DFG+AR +
Sbjct: 155 TFKDLVSCTYQL-ARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXX 213
Query: 659 GNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEI--LSSKKNTGVYNTDSFNLL- 715
T +M+PE + V++ +SDV+SFGVLM EI L G+ + F LL
Sbjct: 214 KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLK 273
Query: 716 -GH 717
GH
Sbjct: 274 EGH 276
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 90/205 (43%), Gaps = 38/205 (18%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQSGQGLK-EFKNEMMLIAKLQHRN 582
E+ + ++G G FG V+ GRL + VAVK LK +F E ++ + H N
Sbjct: 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPN 173
Query: 583 LVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRII-----DGIAQDQ 637
+VRL+G C ++ ++ E + FL G +LRV+ + D A +
Sbjct: 174 IVRLIGVCTQKQPIYIVMELVQGGDFLTFL------RTEGARLRVKTLLQMVGDAAAGME 227
Query: 638 HMNP---------------------KISDFGMAR--MFGGDELQGNTKRIVGTYGYMSPE 674
++ KISDFGM+R G G +++ + +PE
Sbjct: 228 YLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQV--PVKWTAPE 285
Query: 675 YALEGVFSVKSDVFSFGVLMLEILS 699
G +S +SDV+SFG+L+ E S
Sbjct: 286 ALNYGRYSSESDVWSFGILLWETFS 310
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 107/243 (44%), Gaps = 51/243 (20%)
Query: 525 ENFSIQSKLGEGGFGPVY--------KGRLLNGQEVAVKRLSNQSGQ-GLKEFKNEMMLI 575
+ ++ LGEG FG V K + VAVK L + + + L + +EM ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 576 AKL-QHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFL-----------FDPTK------ 617
+ +H+N++ LLG C + G +I EY +L +L +D +
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQM 154
Query: 618 --KHLLG--WQLRVRIIDGIAQDQHMNP---------------KISDFGMARMFGGDELQ 658
K L+ +QL R ++ +A + ++ KI+DFG+AR +
Sbjct: 155 TFKDLVSCTYQL-ARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXX 213
Query: 659 GNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEI--LSSKKNTGVYNTDSFNLL- 715
T +M+PE + V++ +SDV+SFGVLM EI L G+ + F LL
Sbjct: 214 KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLK 273
Query: 716 -GH 717
GH
Sbjct: 274 EGH 276
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 106/234 (45%), Gaps = 49/234 (20%)
Query: 533 LGEGGFGPVY--------KGRLLNGQEVAVKRL-SNQSGQGLKEFKNEMMLIAKL-QHRN 582
LGEG FG V K + +VAVK L S+ + + L + +EM ++ + +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 583 LVRLLGCCIEQGEKILIYEYMVNKSLDVFL-----------FDPTK--------KHLLGW 623
++ LLG C + G +I EY +L +L F+P+ K L+
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 624 QLRV-RIIDGIAQDQHMNP---------------KISDFGMARMFGGDELQGNTKRIVGT 667
+V R ++ +A + ++ KI+DFG+AR + T
Sbjct: 156 AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRLP 215
Query: 668 YGYMSPEYALEGVFSVKSDVFSFGVLMLEI--LSSKKNTGVYNTDSFNLL--GH 717
+M+PE + +++ +SDV+SFGVL+ EI L GV + F LL GH
Sbjct: 216 VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGH 269
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 106/219 (48%), Gaps = 45/219 (20%)
Query: 533 LGEGGFGPVYKGRLLNGQE-----VAVKRLSNQ-SGQGLKEFKNEMMLIAKLQHRNLVRL 586
LG G FG VYKG + E VA+K L S + KE +E ++A + + ++ RL
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 587 LGCCIEQGEKILIYEYMVNKSLDVF--LFDPTKKH--------LLGWQLRV--------- 627
LG C+ ++++ L F L D ++H LL W +++
Sbjct: 85 LGICLTSTVQLIM-------QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 137
Query: 628 -RIIDG--------IAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALE 678
R++ + QH+ KI+DFG+A++ G +E + + + +M+ E L
Sbjct: 138 RRLVHRDLAARNVLVKTPQHV--KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 195
Query: 679 GVFSVKSDVFSFGVLMLEILS--SKKNTGVYNTDSFNLL 715
+++ +SDV+S+GV + E+++ SK G+ ++ ++L
Sbjct: 196 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 234
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 107/243 (44%), Gaps = 51/243 (20%)
Query: 525 ENFSIQSKLGEGGFGPVY--------KGRLLNGQEVAVKRLSNQSGQ-GLKEFKNEMMLI 575
+ ++ LGEG FG V K + VAVK L + + + L + +EM ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 576 AKL-QHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFL-----------FDPTK------ 617
+ +H+N++ LLG C + G +I EY +L +L +D +
Sbjct: 95 KMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 618 --KHLLG--WQLRVRIIDGIAQDQHMNP---------------KISDFGMARMFGGDELQ 658
K L+ +QL R ++ +A + ++ KI+DFG+AR +
Sbjct: 155 TFKDLVSCTYQL-ARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYY 213
Query: 659 GNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEI--LSSKKNTGVYNTDSFNLL- 715
T +M+PE + V++ +SDV+SFGVLM EI L G+ + F LL
Sbjct: 214 KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLK 273
Query: 716 -GH 717
GH
Sbjct: 274 EGH 276
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 96/203 (47%), Gaps = 26/203 (12%)
Query: 523 ATENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVK--RLSNQSGQGLKEFKNEMMLIAKLQ 579
+ ENF K+GEG +G VYK R L G+ VA+K RL ++ E+ L+ +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 580 HRNLVRLLGCCIEQGEKILIYEYM---VNKSLDV-------------FLFDPTKKHLLGW 623
H N+V+LL + + L++E++ + K +D +LF +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 624 QLRVRIIDGIAQDQHMNP----KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALE- 678
RV D Q+ +N K++DFG+AR FG ++ +V T Y +PE L
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPEILLGC 178
Query: 679 GVFSVKSDVFSFGVLMLEILSSK 701
+S D++S G + E+++ +
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 52/225 (23%)
Query: 526 NFSIQSKLGEGGFGPVYKGR---LLNGQE---VAVKRLSNQSGQGLK-EFKNEMMLIAKL 578
N +GEG FG V++ R LL + VAVK L ++ ++ +F+ E L+A+
Sbjct: 48 NIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEF 107
Query: 579 QHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHL-------LGWQLRV---- 627
+ N+V+LLG C L++EYM L+ FL + + L + RV
Sbjct: 108 DNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPG 167
Query: 628 --------------RIIDGIAQ------------------DQHMNPKISDFGMAR-MFGG 654
++ G+A ++M KI+DFG++R ++
Sbjct: 168 PPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSA 227
Query: 655 DELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS 699
D + + + +M PE ++ +SDV+++GV++ EI S
Sbjct: 228 DYYKADGNDAIPI-RWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 96/203 (47%), Gaps = 26/203 (12%)
Query: 523 ATENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVK--RLSNQSGQGLKEFKNEMMLIAKLQ 579
+ ENF K+GEG +G VYK R L G+ VA+K RL ++ E+ L+ +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 580 HRNLVRLLGCCIEQGEKILIYEYM---VNKSLDV-------------FLFDPTKKHLLGW 623
H N+V+LL + + L++E++ + K +D +LF +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 624 QLRVRIIDGIAQDQHMNP----KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALE- 678
RV D Q+ +N K++DFG+AR FG ++ +V T Y +PE L
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPEILLGC 178
Query: 679 GVFSVKSDVFSFGVLMLEILSSK 701
+S D++S G + E+++ +
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 106/219 (48%), Gaps = 45/219 (20%)
Query: 533 LGEGGFGPVYKGRLLNGQE-----VAVKRLSNQ-SGQGLKEFKNEMMLIAKLQHRNLVRL 586
LG G FG VYKG + E VA+K L S + KE +E ++A + + ++ RL
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 587 LGCCIEQGEKILIYEYMVNKSLDVF--LFDPTKKH--------LLGWQLRV--------- 627
LG C+ ++++ L F L D ++H LL W +++
Sbjct: 86 LGICLTSTVQLIM-------QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 138
Query: 628 -RIIDG--------IAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALE 678
R++ + QH+ KI+DFG+A++ G +E + + + +M+ E L
Sbjct: 139 RRLVHRDLAARNVLVKTPQHV--KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 196
Query: 679 GVFSVKSDVFSFGVLMLEILS--SKKNTGVYNTDSFNLL 715
+++ +SDV+S+GV + E+++ SK G+ ++ ++L
Sbjct: 197 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 235
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 105/217 (48%), Gaps = 41/217 (18%)
Query: 533 LGEGGFGPVYKGRLLNGQE-----VAVKRLSNQ-SGQGLKEFKNEMMLIAKLQHRNLVRL 586
LG G FG VYKG + E VA+K L S + KE +E ++A + + ++ RL
Sbjct: 29 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 88
Query: 587 LGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKH--------LLGWQLRV----------R 628
LG C+ + LI + M L D ++H LL W +++ R
Sbjct: 89 LGICLTSTVQ-LITQLMPFGCL----LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 143
Query: 629 IIDG--------IAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGV 680
++ + QH+ KI+DFG+A++ G +E + + + +M+ E L +
Sbjct: 144 LVHRDLAARNVLVKTPQHV--KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 201
Query: 681 FSVKSDVFSFGVLMLEILS--SKKNTGVYNTDSFNLL 715
++ +SDV+S+GV + E+++ SK G+ ++ ++L
Sbjct: 202 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 238
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 96/203 (47%), Gaps = 26/203 (12%)
Query: 523 ATENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVK--RLSNQSGQGLKEFKNEMMLIAKLQ 579
+ ENF K+GEG +G VYK R L G+ VA+K RL ++ E+ L+ +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 580 HRNLVRLLGCCIEQGEKILIYEYM---VNKSLDV-------------FLFDPTKKHLLGW 623
H N+V+LL + + L++E++ + K +D +LF +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 624 QLRVRIIDGIAQDQHMNP----KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALE- 678
RV D Q+ +N K++DFG+AR FG ++ +V T Y +PE L
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPEILLGC 178
Query: 679 GVFSVKSDVFSFGVLMLEILSSK 701
+S D++S G + E+++ +
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 136/299 (45%), Gaps = 63/299 (21%)
Query: 533 LGEGGFGPVYKGRLLNGQE-----VAVKRLSNQ-SGQGLKEFKNEMMLIAKLQHRNLVRL 586
LG G FG VYKG + E VA+K L S + KE +E ++A + + ++ RL
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 587 LGCCIEQGEKILIYEYMVNKSLDVFLFDPT----KKHLLGWQLRV----------RIIDG 632
LG C+ + LI + M L ++ + ++LL W +++ R++
Sbjct: 86 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHR 144
Query: 633 --------IAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVK 684
+ QH+ KI+DFG+A++ G +E + + + +M+ E L +++ +
Sbjct: 145 DLAARNVLVKTPQHV--KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQ 202
Query: 685 SDVFSFGVLMLEILS--SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLP 742
SDV+S+GV + E+++ SK G+ ++ ++L ++ L P + + +
Sbjct: 203 SDVWSYGVTVWELMTFGSKPYDGIPASEISSIL---------EKGERLPQPPICT-IDVY 252
Query: 743 MLVRYINVALLCVQENAEDRPTMSDVV--------------SMINNELFNLPSPKEPPF 787
M++R C +A+ RP +++ + +E +LPSP + F
Sbjct: 253 MIMRK------CWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDERMHLPSPTDSNF 305
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 96/204 (47%), Gaps = 26/204 (12%)
Query: 522 AATENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVK--RLSNQSGQGLKEFKNEMMLIAKL 578
+ ENF K+GEG +G VYK R L G+ VA+K RL ++ E+ L+ +L
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 579 QHRNLVRLLGCCIEQGEKILIYEYM---VNKSLDV-------------FLFDPTKKHLLG 622
H N+V+LL + + L++E++ + K +D +LF +
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 623 WQLRVRIIDGIAQDQHMNP----KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALE 678
RV D Q+ +N K++DFG+AR FG ++ +V T Y +PE L
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPEILLG 180
Query: 679 -GVFSVKSDVFSFGVLMLEILSSK 701
+S D++S G + E+++ +
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 96/204 (47%), Gaps = 26/204 (12%)
Query: 522 AATENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVK--RLSNQSGQGLKEFKNEMMLIAKL 578
+ ENF K+GEG +G VYK R L G+ VA+K RL ++ E+ L+ +L
Sbjct: 2 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 579 QHRNLVRLLGCCIEQGEKILIYEYM---VNKSLDV-------------FLFDPTKKHLLG 622
H N+V+LL + + L++E++ + K +D +LF +
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 623 WQLRVRIIDGIAQDQHMNP----KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALE 678
RV D Q+ +N K++DFG+AR FG ++ +V T Y +PE L
Sbjct: 122 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPEILLG 179
Query: 679 -GVFSVKSDVFSFGVLMLEILSSK 701
+S D++S G + E+++ +
Sbjct: 180 CKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 95/201 (47%), Gaps = 26/201 (12%)
Query: 525 ENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVK--RLSNQSGQGLKEFKNEMMLIAKLQHR 581
ENF K+GEG +G VYK R L G+ VA+K RL ++ E+ L+ +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 582 NLVRLLGCCIEQGEKILIYEYM---VNKSLDV-------------FLFDPTKKHLLGWQL 625
N+V+LL + + L++E++ + K +D +LF +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 626 RVRIIDGIAQDQHMNP----KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALE-GV 680
RV D Q+ +N K++DFG+AR FG ++ +V T Y +PE L
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPEILLGCKY 179
Query: 681 FSVKSDVFSFGVLMLEILSSK 701
+S D++S G + E+++ +
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRR 200
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 135/303 (44%), Gaps = 71/303 (23%)
Query: 533 LGEGGFGPVYKGRLLNGQE-----VAVKRLSNQ-SGQGLKEFKNEMMLIAKLQHRNLVRL 586
LG G FG VYKG + E VA+K L S + KE +E ++A + + ++ RL
Sbjct: 33 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 92
Query: 587 LGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKH--------LLGWQLRV----------R 628
LG C+ + LI + M L D ++H LL W +++ R
Sbjct: 93 LGICLTSTVQ-LITQLMPFGCL----LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 147
Query: 629 IIDG--------IAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGV 680
++ + QH+ KI+DFG+A++ G +E + + + +M+ E L +
Sbjct: 148 LVHRDLAARNVLVKTPQHV--KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 205
Query: 681 FSVKSDVFSFGVLMLEILS--SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNE 738
++ +SDV+S+GV + E+++ SK G+ ++ ++L ++ L P +
Sbjct: 206 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL---------EKGERLPQPPICT- 255
Query: 739 VSLPMLVRYINVALLCVQENAEDRPTMSDVV--------------SMINNELFNLPSPKE 784
+ + M++R C +A+ RP +++ + +E +LPSP +
Sbjct: 256 IDVYMIMRK------CWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDERMHLPSPTD 309
Query: 785 PPF 787
F
Sbjct: 310 SNF 312
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 105/217 (48%), Gaps = 41/217 (18%)
Query: 533 LGEGGFGPVYKGRLLNGQE-----VAVKRLSNQ-SGQGLKEFKNEMMLIAKLQHRNLVRL 586
LG G FG VYKG + E VA+K L S + KE +E ++A + + ++ RL
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 587 LGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKH--------LLGWQLRV----------R 628
LG C+ + LI + M L D ++H LL W +++ R
Sbjct: 83 LGICLTSTVQ-LITQLMPFGXL----LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 137
Query: 629 IIDG--------IAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGV 680
++ + QH+ KI+DFG+A++ G +E + + + +M+ E L +
Sbjct: 138 LVHRDLAARNVLVKTPQHV--KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 195
Query: 681 FSVKSDVFSFGVLMLEILS--SKKNTGVYNTDSFNLL 715
++ +SDV+S+GV + E+++ SK G+ ++ ++L
Sbjct: 196 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 232
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 105/217 (48%), Gaps = 41/217 (18%)
Query: 533 LGEGGFGPVYKGRLLNGQE-----VAVKRLSNQ-SGQGLKEFKNEMMLIAKLQHRNLVRL 586
LG G FG VYKG + E VA+K L S + KE +E ++A + + ++ RL
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 587 LGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKH--------LLGWQLRV----------R 628
LG C+ + LI + M L D ++H LL W +++ R
Sbjct: 83 LGICLTSTVQ-LITQLMPFGCL----LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 137
Query: 629 IIDG--------IAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGV 680
++ + QH+ KI+DFG+A++ G +E + + + +M+ E L +
Sbjct: 138 LVHRDLAARNVLVKTPQHV--KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 195
Query: 681 FSVKSDVFSFGVLMLEILS--SKKNTGVYNTDSFNLL 715
++ +SDV+S+GV + E+++ SK G+ ++ ++L
Sbjct: 196 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 232
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 96/203 (47%), Gaps = 26/203 (12%)
Query: 523 ATENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVK--RLSNQSGQGLKEFKNEMMLIAKLQ 579
+ ENF K+GEG +G VYK R L G+ VA+K RL ++ E+ L+ +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 580 HRNLVRLLGCCIEQGEKILIYEYM---VNKSLDV-------------FLFDPTKKHLLGW 623
H N+V+LL + + L++E++ + K +D +LF +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 624 QLRVRIIDGIAQDQHMNP----KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALE- 678
RV D Q+ +N K++DFG+AR FG ++ +V T Y +PE L
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPEILLGC 178
Query: 679 GVFSVKSDVFSFGVLMLEILSSK 701
+S D++S G + E+++ +
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 96/204 (47%), Gaps = 26/204 (12%)
Query: 522 AATENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVK--RLSNQSGQGLKEFKNEMMLIAKL 578
+ ENF K+GEG +G VYK R L G+ VA+K RL ++ E+ L+ +L
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 579 QHRNLVRLLGCCIEQGEKILIYEYM---VNKSLDV-------------FLFDPTKKHLLG 622
H N+V+LL + + L++E++ + K +D +LF +
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 623 WQLRVRIIDGIAQDQHMNP----KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALE 678
RV D Q+ +N K++DFG+AR FG ++ +V T Y +PE L
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPEILLG 180
Query: 679 -GVFSVKSDVFSFGVLMLEILSSK 701
+S D++S G + E+++ +
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 96/204 (47%), Gaps = 26/204 (12%)
Query: 522 AATENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVK--RLSNQSGQGLKEFKNEMMLIAKL 578
+ ENF K+GEG +G VYK R L G+ VA+K RL ++ E+ L+ +L
Sbjct: 2 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 579 QHRNLVRLLGCCIEQGEKILIYEYM---VNKSLDV-------------FLFDPTKKHLLG 622
H N+V+LL + + L++E++ + K +D +LF +
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 623 WQLRVRIIDGIAQDQHMNP----KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALE 678
RV D Q+ +N K++DFG+AR FG ++ +V T Y +PE L
Sbjct: 122 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPEILLG 179
Query: 679 -GVFSVKSDVFSFGVLMLEILSSK 701
+S D++S G + E+++ +
Sbjct: 180 CKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 95/227 (41%), Gaps = 56/227 (24%)
Query: 526 NFSIQSKLGEGGFGPVYKGRLLN-GQE-----VAVKRLSNQSGQGLKE-FKNEMMLIAKL 578
N LG G FG V + G+E VAVK L + + KE +E+ +++ L
Sbjct: 32 NLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHL 91
Query: 579 -QHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLL---------------- 621
QH N+V LLG C G ++I EY L FL + L
Sbjct: 92 GQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKED 151
Query: 622 GWQLRVR--------IIDGIAQDQHMN------------------PKISDFGMARMFGGD 655
G L +R + G+A N KI DFG+AR D
Sbjct: 152 GRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND 211
Query: 656 E---LQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS 699
++GN + V +M+PE + V++V+SDV+S+G+L+ EI S
Sbjct: 212 SNYIVKGNARLPVK---WMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 95/201 (47%), Gaps = 26/201 (12%)
Query: 525 ENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVK--RLSNQSGQGLKEFKNEMMLIAKLQHR 581
ENF K+GEG +G VYK R L G+ VA+ RL ++ E+ L+ +L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 582 NLVRLLGCCIEQGEKILIYEYM---VNKSLDV-------------FLFDPTKKHLLGWQL 625
N+V+LL + + L++E++ + K +D +LF +
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 626 RVRIIDGIAQDQHMNP----KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALE-GV 680
RV D Q+ +N K++DFG+AR FG ++ T +V T Y +PE L
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAPEILLGCKY 180
Query: 681 FSVKSDVFSFGVLMLEILSSK 701
+S D++S G + E+++ +
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRR 201
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 105/217 (48%), Gaps = 41/217 (18%)
Query: 533 LGEGGFGPVYKGRLLNGQE-----VAVKRLSNQ-SGQGLKEFKNEMMLIAKLQHRNLVRL 586
LG G FG VYKG + E VA+K L S + KE +E ++A + + ++ RL
Sbjct: 48 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 107
Query: 587 LGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKH--------LLGWQLRV----------R 628
LG C+ + LI + M L D ++H LL W +++ R
Sbjct: 108 LGICLTSTVQ-LITQLMPFGCL----LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 162
Query: 629 IIDG--------IAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGV 680
++ + QH+ KI+DFG+A++ G +E + + + +M+ E L +
Sbjct: 163 LVHRDLAARNVLVKTPQHV--KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 220
Query: 681 FSVKSDVFSFGVLMLEILS--SKKNTGVYNTDSFNLL 715
++ +SDV+S+GV + E+++ SK G+ ++ ++L
Sbjct: 221 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 257
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 95/201 (47%), Gaps = 26/201 (12%)
Query: 525 ENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVK--RLSNQSGQGLKEFKNEMMLIAKLQHR 581
ENF K+GEG +G VYK R L G+ VA+ RL ++ E+ L+ +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 582 NLVRLLGCCIEQGEKILIYEYM---VNKSLDV-------------FLFDPTKKHLLGWQL 625
N+V+LL + + L++E++ + K +D +LF +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 626 RVRIIDGIAQDQHMNP----KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALE-GV 680
RV D Q+ +N K++DFG+AR FG ++ T +V T Y +PE L
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAPEILLGCKY 179
Query: 681 FSVKSDVFSFGVLMLEILSSK 701
+S D++S G + E+++ +
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRR 200
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 107/243 (44%), Gaps = 51/243 (20%)
Query: 525 ENFSIQSKLGEGGFGPVY--------KGRLLNGQEVAVKRLSNQSGQ-GLKEFKNEMMLI 575
+ ++ LGEG FG V K + VAVK L + + + L + +EM ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMM 94
Query: 576 AKL-QHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFL-----------FDPTK------ 617
+ +H+N++ LLG C + G +I EY +L +L +D +
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 618 --KHLLG--WQLRVRIIDGIAQDQHMNP---------------KISDFGMARMFGGDELQ 658
K L+ +QL R ++ +A + ++ KI+DFG+AR +
Sbjct: 155 TFKDLVSCTYQL-ARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYY 213
Query: 659 GNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEI--LSSKKNTGVYNTDSFNLL- 715
T +M+PE + V++ +SDV+SFGVLM EI L G+ + F LL
Sbjct: 214 KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLK 273
Query: 716 -GH 717
GH
Sbjct: 274 EGH 276
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 105/217 (48%), Gaps = 41/217 (18%)
Query: 533 LGEGGFGPVYKGRLLNGQE-----VAVKRLSNQ-SGQGLKEFKNEMMLIAKLQHRNLVRL 586
LG G FG VYKG + E VA+K L S + KE +E ++A + + ++ RL
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 587 LGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKH--------LLGWQLRV----------R 628
LG C+ + LI + M L D ++H LL W +++ R
Sbjct: 86 LGICLTSTVQ-LITQLMPFGCL----LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 140
Query: 629 IIDG--------IAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGV 680
++ + QH+ KI+DFG+A++ G +E + + + +M+ E L +
Sbjct: 141 LVHRDLAARNVLVKTPQHV--KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 198
Query: 681 FSVKSDVFSFGVLMLEILS--SKKNTGVYNTDSFNLL 715
++ +SDV+S+GV + E+++ SK G+ ++ ++L
Sbjct: 199 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 235
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 105/217 (48%), Gaps = 41/217 (18%)
Query: 533 LGEGGFGPVYKGRLLNGQE-----VAVKRLSNQ-SGQGLKEFKNEMMLIAKLQHRNLVRL 586
LG G FG VYKG + E VA+K L S + KE +E ++A + + ++ RL
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 587 LGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKH--------LLGWQLRV----------R 628
LG C+ + LI + M L D ++H LL W +++ R
Sbjct: 85 LGICLTSTVQ-LITQLMPFGCL----LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 139
Query: 629 IIDG--------IAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGV 680
++ + QH+ KI+DFG+A++ G +E + + + +M+ E L +
Sbjct: 140 LVHRDLAARNVLVKTPQHV--KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 197
Query: 681 FSVKSDVFSFGVLMLEILS--SKKNTGVYNTDSFNLL 715
++ +SDV+S+GV + E+++ SK G+ ++ ++L
Sbjct: 198 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 234
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 95/201 (47%), Gaps = 26/201 (12%)
Query: 525 ENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVK--RLSNQSGQGLKEFKNEMMLIAKLQHR 581
ENF K+GEG +G VYK R L G+ VA+K RL ++ E+ L+ +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 582 NLVRLLGCCIEQGEKILIYEYM---VNKSLDV-------------FLFDPTKKHLLGWQL 625
N+V+LL + + L++E++ + K +D +LF +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 626 RVRIIDGIAQDQHMNP----KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALE-GV 680
RV D Q+ +N K++DFG+AR FG ++ +V T Y +PE L
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPEILLGCKY 179
Query: 681 FSVKSDVFSFGVLMLEILSSK 701
+S D++S G + E+++ +
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRR 200
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 95/201 (47%), Gaps = 26/201 (12%)
Query: 525 ENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVK--RLSNQSGQGLKEFKNEMMLIAKLQHR 581
ENF K+GEG +G VYK R L G+ VA+K RL ++ E+ L+ +L H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 582 NLVRLLGCCIEQGEKILIYEYM---VNKSLDV-------------FLFDPTKKHLLGWQL 625
N+V+LL + + L++E++ + K +D +LF +
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 626 RVRIIDGIAQDQHMNP----KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALE-GV 680
RV D Q+ +N K++DFG+AR FG ++ +V T Y +PE L
Sbjct: 124 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPEILLGCKY 181
Query: 681 FSVKSDVFSFGVLMLEILSSK 701
+S D++S G + E+++ +
Sbjct: 182 YSTAVDIWSLGCIFAEMVTRR 202
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 105/217 (48%), Gaps = 41/217 (18%)
Query: 533 LGEGGFGPVYKGRLLNGQE-----VAVKRLSNQ-SGQGLKEFKNEMMLIAKLQHRNLVRL 586
LG G FG VYKG + E VA+K L S + KE +E ++A + + ++ RL
Sbjct: 20 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 79
Query: 587 LGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKH--------LLGWQLRV----------R 628
LG C+ + LI + M L D ++H LL W +++ R
Sbjct: 80 LGICLTSTVQ-LITQLMPFGCL----LDYVREHKDNIGSQYLLNWCVQIAEGMNYLEDRR 134
Query: 629 IIDG--------IAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGV 680
++ + QH+ KI+DFG+A++ G +E + + + +M+ E L +
Sbjct: 135 LVHRDLAARNVLVKTPQHV--KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 192
Query: 681 FSVKSDVFSFGVLMLEILS--SKKNTGVYNTDSFNLL 715
++ +SDV+S+GV + E+++ SK G+ ++ ++L
Sbjct: 193 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 229
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 96/204 (47%), Gaps = 26/204 (12%)
Query: 522 AATENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVK--RLSNQSGQGLKEFKNEMMLIAKL 578
+ ENF K+GEG +G VYK R L G+ VA+K RL ++ E+ L+ +L
Sbjct: 1 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 579 QHRNLVRLLGCCIEQGEKILIYEYM---VNKSLDV-------------FLFDPTKKHLLG 622
H N+V+LL + + L++E++ + K +D +LF +
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 623 WQLRVRIIDGIAQDQHMNP----KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALE 678
RV D Q+ +N K++DFG+AR FG ++ +V T Y +PE L
Sbjct: 121 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPEILLG 178
Query: 679 -GVFSVKSDVFSFGVLMLEILSSK 701
+S D++S G + E+++ +
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 105/217 (48%), Gaps = 41/217 (18%)
Query: 533 LGEGGFGPVYKGRLLNGQE-----VAVKRLSNQ-SGQGLKEFKNEMMLIAKLQHRNLVRL 586
LG G FG VYKG + E VA+K L S + KE +E ++A + + ++ RL
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 587 LGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKH--------LLGWQLRV----------R 628
LG C+ + LI + M L D ++H LL W +++ R
Sbjct: 86 LGICLTSTVQ-LITQLMPFGCL----LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 140
Query: 629 IIDG--------IAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGV 680
++ + QH+ KI+DFG+A++ G +E + + + +M+ E L +
Sbjct: 141 LVHRDLAARNVLVKTPQHV--KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 198
Query: 681 FSVKSDVFSFGVLMLEILS--SKKNTGVYNTDSFNLL 715
++ +SDV+S+GV + E+++ SK G+ ++ ++L
Sbjct: 199 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 235
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 105/217 (48%), Gaps = 41/217 (18%)
Query: 533 LGEGGFGPVYKGRLLNGQE-----VAVKRLSNQ-SGQGLKEFKNEMMLIAKLQHRNLVRL 586
LG G FG VYKG + E VA+K L S + KE +E ++A + + ++ RL
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 587 LGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKH--------LLGWQLRV----------R 628
LG C+ + LI + M L D ++H LL W +++ R
Sbjct: 83 LGICLTSTVQ-LITQLMPFGCL----LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 137
Query: 629 IIDG--------IAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGV 680
++ + QH+ KI+DFG+A++ G +E + + + +M+ E L +
Sbjct: 138 LVHRDLAARNVLVKTPQHV--KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 195
Query: 681 FSVKSDVFSFGVLMLEILS--SKKNTGVYNTDSFNLL 715
++ +SDV+S+GV + E+++ SK G+ ++ ++L
Sbjct: 196 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 232
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 107/243 (44%), Gaps = 51/243 (20%)
Query: 525 ENFSIQSKLGEGGFGPVY--------KGRLLNGQEVAVKRLSNQSGQ-GLKEFKNEMMLI 575
+ ++ LGEG FG V K + VAVK L + + + L + +EM ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 576 AKL-QHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFL-----------FDPTK------ 617
+ +H+N++ LLG C + G +I EY +L +L +D +
Sbjct: 95 KMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 618 --KHLLG--WQLRVRIIDGIAQDQHMNP---------------KISDFGMARMFGGDELQ 658
K L+ +QL R ++ +A + ++ KI+DFG+AR +
Sbjct: 155 TFKDLVSCTYQL-ARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYY 213
Query: 659 GNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEI--LSSKKNTGVYNTDSFNLL- 715
T +M+PE + V++ +SDV+SFGVLM EI L G+ + F LL
Sbjct: 214 KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLK 273
Query: 716 -GH 717
GH
Sbjct: 274 EGH 276
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 96/204 (47%), Gaps = 26/204 (12%)
Query: 522 AATENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVK--RLSNQSGQGLKEFKNEMMLIAKL 578
+ ENF K+GEG +G VYK R L G+ VA+K RL ++ E+ L+ +L
Sbjct: 4 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 63
Query: 579 QHRNLVRLLGCCIEQGEKILIYEYM---VNKSLDV-------------FLFDPTKKHLLG 622
H N+V+LL + + L++E++ + K +D +LF +
Sbjct: 64 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 123
Query: 623 WQLRVRIIDGIAQDQHMNP----KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALE 678
RV D Q+ +N K++DFG+AR FG ++ +V T Y +PE L
Sbjct: 124 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPEILLG 181
Query: 679 -GVFSVKSDVFSFGVLMLEILSSK 701
+S D++S G + E+++ +
Sbjct: 182 CKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 107/243 (44%), Gaps = 51/243 (20%)
Query: 525 ENFSIQSKLGEGGFGPVY--------KGRLLNGQEVAVKRLSNQSGQ-GLKEFKNEMMLI 575
+ ++ LGEG FG V K + VAVK L + + + L + +EM ++
Sbjct: 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 140
Query: 576 AKL-QHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFL-----------FDPTK------ 617
+ +H+N++ LLG C + G +I EY +L +L +D +
Sbjct: 141 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 200
Query: 618 --KHLLG--WQLRVRIIDGIAQDQHMNP---------------KISDFGMARMFGGDELQ 658
K L+ +QL R ++ +A + ++ KI+DFG+AR +
Sbjct: 201 TFKDLVSCTYQL-ARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYY 259
Query: 659 GNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEI--LSSKKNTGVYNTDSFNLL- 715
T +M+PE + V++ +SDV+SFGVLM EI L G+ + F LL
Sbjct: 260 KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLK 319
Query: 716 -GH 717
GH
Sbjct: 320 EGH 322
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 105/217 (48%), Gaps = 41/217 (18%)
Query: 533 LGEGGFGPVYKGRLLNGQE-----VAVKRLSNQ-SGQGLKEFKNEMMLIAKLQHRNLVRL 586
LG G FG VYKG + E VA+K L S + KE +E ++A + + ++ RL
Sbjct: 30 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 587 LGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKH--------LLGWQLRV----------R 628
LG C+ + LI + M L D ++H LL W +++ R
Sbjct: 90 LGICLTSTVQ-LITQLMPFGCL----LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 144
Query: 629 IIDG--------IAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGV 680
++ + QH+ KI+DFG+A++ G +E + + + +M+ E L +
Sbjct: 145 LVHRDLAARNVLVKTPQHV--KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 202
Query: 681 FSVKSDVFSFGVLMLEILS--SKKNTGVYNTDSFNLL 715
++ +SDV+S+GV + E+++ SK G+ ++ ++L
Sbjct: 203 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 239
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 90/205 (43%), Gaps = 38/205 (18%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQSGQGLK-EFKNEMMLIAKLQHRN 582
E+ + ++G G FG V+ GRL + VAVK LK +F E ++ + H N
Sbjct: 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPN 173
Query: 583 LVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRII-----DGIAQDQ 637
+VRL+G C ++ ++ E + FL G +LRV+ + D A +
Sbjct: 174 IVRLIGVCTQKQPIYIVMELVQGGDFLTFL------RTEGARLRVKTLLQMVGDAAAGME 227
Query: 638 HMNP---------------------KISDFGMAR--MFGGDELQGNTKRIVGTYGYMSPE 674
++ KISDFGM+R G G +++ + +PE
Sbjct: 228 YLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQV--PVKWTAPE 285
Query: 675 YALEGVFSVKSDVFSFGVLMLEILS 699
G +S +SDV+SFG+L+ E S
Sbjct: 286 ALNYGRYSSESDVWSFGILLWETFS 310
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 105/219 (47%), Gaps = 45/219 (20%)
Query: 533 LGEGGFGPVYKGRLLNGQE-----VAVKRLSNQ-SGQGLKEFKNEMMLIAKLQHRNLVRL 586
LG G FG VYKG + E VA+K L S + KE +E ++A + + ++ RL
Sbjct: 27 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 86
Query: 587 LGCCIEQGEKILIYEYMVNKSLDVF--LFDPTKKH--------LLGWQLRV--------- 627
LG C+ ++++ L F L D ++H LL W +++
Sbjct: 87 LGICLTSTVQLIM-------QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 139
Query: 628 -RIIDG--------IAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALE 678
R++ + QH+ KI+DFG A++ G +E + + + +M+ E L
Sbjct: 140 RRLVHRDLAARNVLVKTPQHV--KITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILH 197
Query: 679 GVFSVKSDVFSFGVLMLEILS--SKKNTGVYNTDSFNLL 715
+++ +SDV+S+GV + E+++ SK G+ ++ ++L
Sbjct: 198 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 236
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 106/234 (45%), Gaps = 49/234 (20%)
Query: 533 LGEGGFGPVY--------KGRLLNGQEVAVKRL-SNQSGQGLKEFKNEMMLIAKL-QHRN 582
LGEG FG V K + +VAVK L S+ + + L + +EM ++ + +H+N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 583 LVRLLGCCIEQGEKILIYEYMVNKSLDVFL-----------FDPTK--------KHLLGW 623
++ LLG C + G +I EY +L +L ++P+ K L+
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 624 QLRV-RIIDGIAQDQHMNP---------------KISDFGMARMFGGDELQGNTKRIVGT 667
+V R ++ +A + ++ KI+DFG+AR + T
Sbjct: 141 AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLP 200
Query: 668 YGYMSPEYALEGVFSVKSDVFSFGVLMLEI--LSSKKNTGVYNTDSFNLL--GH 717
+M+PE + +++ +SDV+SFGVL+ EI L GV + F LL GH
Sbjct: 201 VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGH 254
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 135/305 (44%), Gaps = 75/305 (24%)
Query: 533 LGEGGFGPVYKGRLLNGQE-----VAVKRLSNQ-SGQGLKEFKNEMMLIAKLQHRNLVRL 586
LG G FG VYKG + E VA+K L S + KE +E ++A + + ++ RL
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 587 LGCCIEQGEKILIYEYMVNKSLDVF--LFDPTKKH--------LLGWQLRV--------- 627
LG C+ ++++ L F L D ++H LL W +++
Sbjct: 85 LGICLTSTVQLIM-------QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 137
Query: 628 -RIIDG--------IAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALE 678
R++ + QH+ KI+DFG A++ G +E + + + +M+ E L
Sbjct: 138 RRLVHRDLAARNVLVKTPQHV--KITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILH 195
Query: 679 GVFSVKSDVFSFGVLMLEILS--SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQ 736
+++ +SDV+S+GV + E+++ SK G+ ++ ++L ++ L P +
Sbjct: 196 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL---------EKGERLPQPPIC 246
Query: 737 NEVSLPMLVRYINVALLCVQENAEDRPTMSDVV--------------SMINNELFNLPSP 782
+ + M++R C +A+ RP +++ + +E +LPSP
Sbjct: 247 T-IDVYMIMRK------CWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDERMHLPSP 299
Query: 783 KEPPF 787
+ F
Sbjct: 300 TDSNF 304
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 99/208 (47%), Gaps = 34/208 (16%)
Query: 522 AATENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVK--RLSNQSGQGLKEFKNEMMLIAKL 578
+ ENF K+GEG +G VYK R L G+ VA+K RL ++ E+ L+ +L
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 579 QHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRV------RIIDG 632
H N+V+LL + + L++E++ ++ L F+ L G L + +++ G
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKTFM---DASALTGIPLPLIKSYLFQLLQG 118
Query: 633 IA-------QDQHMNP-----------KISDFGMARMFGGDELQGNTKRIVGTYGYMSPE 674
+A + + P K++DFG+AR FG ++ +V T Y +PE
Sbjct: 119 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPE 176
Query: 675 YALE-GVFSVKSDVFSFGVLMLEILSSK 701
L +S D++S G + E+++ +
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 105/219 (47%), Gaps = 45/219 (20%)
Query: 533 LGEGGFGPVYKGRLLNGQE-----VAVKRLSNQ-SGQGLKEFKNEMMLIAKLQHRNLVRL 586
LG G FG VYKG + E VA+K L S + KE +E ++A + + ++ RL
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 587 LGCCIEQGEKILIYEYMVNKSLDVF--LFDPTKKH--------LLGWQLRV--------- 627
LG C+ ++++ L F L D ++H LL W +++
Sbjct: 85 LGICLTSTVQLIM-------QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 137
Query: 628 -RIIDG--------IAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALE 678
R++ + QH+ KI+DFG A++ G +E + + + +M+ E L
Sbjct: 138 RRLVHRDLAARNVLVKTPQHV--KITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILH 195
Query: 679 GVFSVKSDVFSFGVLMLEILS--SKKNTGVYNTDSFNLL 715
+++ +SDV+S+GV + E+++ SK G+ ++ ++L
Sbjct: 196 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 234
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 135/299 (45%), Gaps = 63/299 (21%)
Query: 533 LGEGGFGPVYKGRLLNGQE-----VAVKRLSNQ-SGQGLKEFKNEMMLIAKLQHRNLVRL 586
LG G FG VYKG + E VA+K L S + KE +E ++A + + ++ RL
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 587 LGCCIEQGEKILIYEYMVNKSLDVFLFDPT----KKHLLGWQLRV----------RIIDG 632
LG C+ + LI + M L ++ + ++LL W +++ R++
Sbjct: 85 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHR 143
Query: 633 --------IAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVK 684
+ QH+ KI+DFG A++ G +E + + + +M+ E L +++ +
Sbjct: 144 DLAARNVLVKTPQHV--KITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQ 201
Query: 685 SDVFSFGVLMLEILS--SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLP 742
SDV+S+GV + E+++ SK G+ ++ ++L ++ L P + + +
Sbjct: 202 SDVWSYGVTVWELMTFGSKPYDGIPASEISSIL---------EKGERLPQPPICT-IDVY 251
Query: 743 MLVRYINVALLCVQENAEDRPTMSDVV--------------SMINNELFNLPSPKEPPF 787
M++R C +A+ RP +++ + +E +LPSP + F
Sbjct: 252 MIMRK------CWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDERMHLPSPTDSNF 304
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 106/234 (45%), Gaps = 49/234 (20%)
Query: 533 LGEGGFGPVY--------KGRLLNGQEVAVKRL-SNQSGQGLKEFKNEMMLIAKL-QHRN 582
LGEG FG V K + +VAVK L S+ + + L + +EM ++ + +H+N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 583 LVRLLGCCIEQGEKILIYEYMVNKSLDVFL-----------FDPTK--------KHLLGW 623
++ LLG C + G +I EY +L +L ++P+ K L+
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 624 QLRV-RIIDGIAQDQHMNP---------------KISDFGMARMFGGDELQGNTKRIVGT 667
+V R ++ +A + ++ KI+DFG+AR + T
Sbjct: 145 AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLP 204
Query: 668 YGYMSPEYALEGVFSVKSDVFSFGVLMLEI--LSSKKNTGVYNTDSFNLL--GH 717
+M+PE + +++ +SDV+SFGVL+ EI L GV + F LL GH
Sbjct: 205 VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGH 258
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 107/243 (44%), Gaps = 51/243 (20%)
Query: 525 ENFSIQSKLGEGGFGPVY--------KGRLLNGQEVAVKRLSNQSGQ-GLKEFKNEMMLI 575
+ ++ LGEG FG V K + VAVK L + + + L + +EM ++
Sbjct: 22 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 81
Query: 576 AKL-QHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFL-----------FDPTK------ 617
+ +H+N++ LLG C + G +I EY +L +L +D +
Sbjct: 82 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 141
Query: 618 --KHLLG--WQLRVRIIDGIAQDQHMNP---------------KISDFGMARMFGGDELQ 658
K L+ +QL R ++ +A + ++ KI+DFG+AR +
Sbjct: 142 TFKDLVSCTYQL-ARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYY 200
Query: 659 GNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEI--LSSKKNTGVYNTDSFNLL- 715
T +M+PE + V++ +SDV+SFGVLM EI L G+ + F LL
Sbjct: 201 KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLK 260
Query: 716 -GH 717
GH
Sbjct: 261 EGH 263
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 106/234 (45%), Gaps = 49/234 (20%)
Query: 533 LGEGGFGPVY--------KGRLLNGQEVAVKRL-SNQSGQGLKEFKNEMMLIAKL-QHRN 582
LGEG FG V K + +VAVK L S+ + + L + +EM ++ + +H+N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 583 LVRLLGCCIEQGEKILIYEYMVNKSLDVFL-----------FDPTK--------KHLLGW 623
++ LLG C + G +I EY +L +L ++P+ K L+
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 624 QLRV-RIIDGIAQDQHMNP---------------KISDFGMARMFGGDELQGNTKRIVGT 667
+V R ++ +A + ++ KI+DFG+AR + T
Sbjct: 149 AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLP 208
Query: 668 YGYMSPEYALEGVFSVKSDVFSFGVLMLEI--LSSKKNTGVYNTDSFNLL--GH 717
+M+PE + +++ +SDV+SFGVL+ EI L GV + F LL GH
Sbjct: 209 VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGH 262
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 107/243 (44%), Gaps = 51/243 (20%)
Query: 525 ENFSIQSKLGEGGFGPVY--------KGRLLNGQEVAVKRLSNQSGQ-GLKEFKNEMMLI 575
+ ++ LGEG FG V K + VAVK L + + + L + +EM ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 576 AKL-QHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFL-----------FDPTK------ 617
+ +H+N++ LLG C + G +I EY +L +L +D +
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 618 --KHLLG--WQLRVRIIDGIAQDQHMNP---------------KISDFGMARMFGGDELQ 658
K L+ +QL R ++ +A + ++ +I+DFG+AR +
Sbjct: 155 TFKDLVSCTYQL-ARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYY 213
Query: 659 GNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEI--LSSKKNTGVYNTDSFNLL- 715
T +M+PE + V++ +SDV+SFGVLM EI L G+ + F LL
Sbjct: 214 KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLK 273
Query: 716 -GH 717
GH
Sbjct: 274 EGH 276
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 96/204 (47%), Gaps = 26/204 (12%)
Query: 522 AATENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVK--RLSNQSGQGLKEFKNEMMLIAKL 578
+ ENF K+GEG +G VYK R L G+ VA+K RL ++ E+ L+ +L
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 579 QHRNLVRLLGCCIEQGEKILIYEYM---VNKSLDV-------------FLFDPTKKHLLG 622
H N+V+LL + + L++E++ + K +D +LF +
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 623 WQLRVRIIDGIAQDQHMNP----KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALE 678
RV D Q+ +N K++DFG+AR FG ++ +V T Y +PE L
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPEILLG 180
Query: 679 -GVFSVKSDVFSFGVLMLEILSSK 701
+S D++S G + E+++ +
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 107/243 (44%), Gaps = 51/243 (20%)
Query: 525 ENFSIQSKLGEGGFGPVY--------KGRLLNGQEVAVKRLSNQSGQ-GLKEFKNEMMLI 575
+ ++ LGEG FG V K + VAVK L + + + L + +EM ++
Sbjct: 27 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 86
Query: 576 AKL-QHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFL-----------FDPTK------ 617
+ +H+N++ LLG C + G +I EY +L +L +D +
Sbjct: 87 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 146
Query: 618 --KHLLG--WQLRVRIIDGIAQDQHMNP---------------KISDFGMARMFGGDELQ 658
K L+ +QL R ++ +A + ++ KI+DFG+AR +
Sbjct: 147 TFKDLVSCTYQL-ARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYY 205
Query: 659 GNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEI--LSSKKNTGVYNTDSFNLL- 715
T +M+PE + V++ +SDV+SFGVLM EI L G+ + F LL
Sbjct: 206 KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLK 265
Query: 716 -GH 717
GH
Sbjct: 266 EGH 268
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 106/234 (45%), Gaps = 49/234 (20%)
Query: 533 LGEGGFGPVY--------KGRLLNGQEVAVKRL-SNQSGQGLKEFKNEMMLIAKL-QHRN 582
LGEG FG V K + +VAVK L S+ + + L + +EM ++ + +H+N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 583 LVRLLGCCIEQGEKILIYEYMVNKSLDVFL-----------FDPTK--------KHLLGW 623
++ LLG C + G +I EY +L +L ++P+ K L+
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 624 QLRV-RIIDGIAQDQHMNP---------------KISDFGMARMFGGDELQGNTKRIVGT 667
+V R ++ +A + ++ KI+DFG+AR + T
Sbjct: 148 AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLP 207
Query: 668 YGYMSPEYALEGVFSVKSDVFSFGVLMLEI--LSSKKNTGVYNTDSFNLL--GH 717
+M+PE + +++ +SDV+SFGVL+ EI L GV + F LL GH
Sbjct: 208 VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGH 261
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 107/243 (44%), Gaps = 51/243 (20%)
Query: 525 ENFSIQSKLGEGGFGPVY--------KGRLLNGQEVAVKRLSNQSGQ-GLKEFKNEMMLI 575
+ ++ LGEG FG V K + VAVK L + + + L + +EM ++
Sbjct: 24 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 83
Query: 576 AKL-QHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFL-----------FDPTK------ 617
+ +H+N++ LLG C + G +I EY +L +L +D +
Sbjct: 84 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 143
Query: 618 --KHLLG--WQLRVRIIDGIAQDQHMNP---------------KISDFGMARMFGGDELQ 658
K L+ +QL R ++ +A + ++ KI+DFG+AR +
Sbjct: 144 TFKDLVSCTYQL-ARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYY 202
Query: 659 GNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEI--LSSKKNTGVYNTDSFNLL- 715
T +M+PE + V++ +SDV+SFGVLM EI L G+ + F LL
Sbjct: 203 KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLK 262
Query: 716 -GH 717
GH
Sbjct: 263 EGH 265
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 106/234 (45%), Gaps = 49/234 (20%)
Query: 533 LGEGGFGPVY--------KGRLLNGQEVAVKRL-SNQSGQGLKEFKNEMMLIAKL-QHRN 582
LGEG FG V K + +VAVK L S+ + + L + +EM ++ + +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 583 LVRLLGCCIEQGEKILIYEYMVNKSLDVFL-----------FDPTK--------KHLLGW 623
++ LLG C + G +I EY +L +L ++P+ K L+
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 624 QLRV-RIIDGIAQDQHMNP---------------KISDFGMARMFGGDELQGNTKRIVGT 667
+V R ++ +A + ++ KI+DFG+AR + T
Sbjct: 156 AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLP 215
Query: 668 YGYMSPEYALEGVFSVKSDVFSFGVLMLEI--LSSKKNTGVYNTDSFNLL--GH 717
+M+PE + +++ +SDV+SFGVL+ EI L GV + F LL GH
Sbjct: 216 VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGH 269
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 97/205 (47%), Gaps = 28/205 (13%)
Query: 522 AATENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVK--RLSNQSGQGLKEFKNEMMLIAKL 578
+ ENF K+GEG +G VYK R L G+ VA+K RL ++ E+ L+ +L
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 579 QHRNLVRLLGCCIEQGEKILIYEYM---VNKSLDVFLFDPTKKHLLGWQLRVRIIDGIA- 634
H N+V+LL + + L++E++ + K +D L+ L +++ G+A
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYL-FQLLQGLAF 121
Query: 635 ------QDQHMNP-----------KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYAL 677
+ + P K++DFG+AR FG ++ +V T Y +PE L
Sbjct: 122 CHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPEILL 179
Query: 678 E-GVFSVKSDVFSFGVLMLEILSSK 701
+S D++S G + E+++ +
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 106/234 (45%), Gaps = 49/234 (20%)
Query: 533 LGEGGFGPVY--------KGRLLNGQEVAVKRL-SNQSGQGLKEFKNEMMLIAKL-QHRN 582
LGEG FG V K + +VAVK L S+ + + L + +EM ++ + +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 583 LVRLLGCCIEQGEKILIYEYMVNKSLDVFL-----------FDPTK--------KHLLGW 623
++ LLG C + G +I EY +L +L ++P+ K L+
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 624 QLRV-RIIDGIAQDQHMNP---------------KISDFGMARMFGGDELQGNTKRIVGT 667
+V R ++ +A + ++ KI+DFG+AR + T
Sbjct: 156 AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLP 215
Query: 668 YGYMSPEYALEGVFSVKSDVFSFGVLMLEI--LSSKKNTGVYNTDSFNLL--GH 717
+M+PE + +++ +SDV+SFGVL+ EI L GV + F LL GH
Sbjct: 216 VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGH 269
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 106/234 (45%), Gaps = 49/234 (20%)
Query: 533 LGEGGFGPVY--------KGRLLNGQEVAVKRL-SNQSGQGLKEFKNEMMLIAKL-QHRN 582
LGEG FG V K + +VAVK L S+ + + L + +EM ++ + +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 583 LVRLLGCCIEQGEKILIYEYMVNKSLDVFL-----------FDPTK--------KHLLGW 623
++ LLG C + G +I EY +L +L ++P+ K L+
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 624 QLRV-RIIDGIAQDQHMNP---------------KISDFGMARMFGGDELQGNTKRIVGT 667
+V R ++ +A + ++ KI+DFG+AR + T
Sbjct: 156 AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLP 215
Query: 668 YGYMSPEYALEGVFSVKSDVFSFGVLMLEI--LSSKKNTGVYNTDSFNLL--GH 717
+M+PE + +++ +SDV+SFGVL+ EI L GV + F LL GH
Sbjct: 216 VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGH 269
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 105/213 (49%), Gaps = 33/213 (15%)
Query: 533 LGEGGFGPVYKGRLLNGQE-----VAVKRLSNQ-SGQGLKEFKNEMMLIAKLQHRNLVRL 586
LG G FG VYKG + E VA+K L S + KE +E ++A + + ++ RL
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 587 LGCCIEQGEKILIYEYMVNKSLDVFLFDPT----KKHLLGWQLRV----------RIIDG 632
LG C+ + LI + M L ++ + ++LL W +++ R++
Sbjct: 83 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHR 141
Query: 633 --------IAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVK 684
+ QH+ KI+DFG A++ G +E + + + +M+ E L +++ +
Sbjct: 142 DLAARNVLVKTPQHV--KITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQ 199
Query: 685 SDVFSFGVLMLEILS--SKKNTGVYNTDSFNLL 715
SDV+S+GV + E+++ SK G+ ++ ++L
Sbjct: 200 SDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 232
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 101/212 (47%), Gaps = 37/212 (17%)
Query: 523 ATENFSIQSKLGEGGFGPVYKGRLLN--GQEVAVKRLSNQSGQ---GLKEFKNEMML--I 575
A + + +++GEG +G V+K R L G+ VA+KR+ Q+G+ L + +L +
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 576 AKLQHRNLVRLLGCCI-----EQGEKILIYEYMVNKSLDVFLFD------PTK--KHLLG 622
+H N+VRL C + + L++E+ V++ L +L PT+ K ++
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEH-VDQDLTTYLDKVPEPGVPTETIKDMMF 127
Query: 623 WQLR-------VRIIDGIAQDQHM------NPKISDFGMARMFGGDELQGNTKRIVGTYG 669
LR R++ + Q++ K++DFG+AR++ Q +V T
Sbjct: 128 QLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYS---FQMALTSVVVTLW 184
Query: 670 YMSPEYALEGVFSVKSDVFSFGVLMLEILSSK 701
Y +PE L+ ++ D++S G + E+ K
Sbjct: 185 YRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 97/205 (47%), Gaps = 28/205 (13%)
Query: 522 AATENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVK--RLSNQSGQGLKEFKNEMMLIAKL 578
+ ENF K+GEG +G VYK R L G+ VA+K RL ++ E+ L+ +L
Sbjct: 1 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 579 QHRNLVRLLGCCIEQGEKILIYEYM---VNKSLDVFLFDPTKKHLLGWQLRVRIIDGIA- 634
H N+V+LL + + L++E++ + K +D L+ L +++ G+A
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYL-FQLLQGLAF 119
Query: 635 ------QDQHMNP-----------KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYAL 677
+ + P K++DFG+AR FG ++ +V T Y +PE L
Sbjct: 120 CHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPEILL 177
Query: 678 E-GVFSVKSDVFSFGVLMLEILSSK 701
+S D++S G + E+++ +
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 93/196 (47%), Gaps = 30/196 (15%)
Query: 533 LGEGGFGPVYKGRLLNGQ-EVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCI 591
LG+G +G VY GR L+ Q +A+K + + + + E+ L L+H+N+V+ LG
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 89
Query: 592 EQGEKILIYEYMVNKSLDVFL---FDPTK--KHLLGWQLRVRIIDGIA-----QDQHMNP 641
E G + E + SL L + P K + +G+ + +I++G+ Q H +
Sbjct: 90 ENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTK-QILEGLKYLHDNQIVHRDI 148
Query: 642 --------------KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGV--FSVKS 685
KISDFG ++ G + T+ GT YM+PE +G + +
Sbjct: 149 KGDNVLINTYSGVLKISDFGTSKRLAG--INPCTETFTGTLQYMAPEIIDKGPRGYGKAA 206
Query: 686 DVFSFGVLMLEILSSK 701
D++S G ++E+ + K
Sbjct: 207 DIWSLGCTIIEMATGK 222
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 97/205 (47%), Gaps = 28/205 (13%)
Query: 522 AATENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVK--RLSNQSGQGLKEFKNEMMLIAKL 578
+ ENF K+GEG +G VYK R L G+ VA+K RL ++ E+ L+ +L
Sbjct: 2 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 579 QHRNLVRLLGCCIEQGEKILIYEYM---VNKSLDVFLFDPTKKHLLGWQLRVRIIDGIA- 634
H N+V+LL + + L++E++ + K +D L+ L +++ G+A
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL-FQLLQGLAF 120
Query: 635 ------QDQHMNP-----------KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYAL 677
+ + P K++DFG+AR FG ++ +V T Y +PE L
Sbjct: 121 CHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPEILL 178
Query: 678 E-GVFSVKSDVFSFGVLMLEILSSK 701
+S D++S G + E+++ +
Sbjct: 179 GCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 96/204 (47%), Gaps = 26/204 (12%)
Query: 522 AATENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVK--RLSNQSGQGLKEFKNEMMLIAKL 578
+ ENF K+GEG +G VYK R L G+ VA+K RL ++ E+ L+ +L
Sbjct: 1 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 579 QHRNLVRLLGCCIEQGEKILIYEYM---VNKSLDV-------------FLFDPTKKHLLG 622
H N+V+LL + + L++E++ + K +D +LF +
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 623 WQLRVRIIDGIAQDQHMNP----KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALE 678
RV D ++ +N K++DFG+AR FG ++ +V T Y +PE L
Sbjct: 121 HSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPEILLG 178
Query: 679 -GVFSVKSDVFSFGVLMLEILSSK 701
+S D++S G + E+++ +
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 121/287 (42%), Gaps = 50/287 (17%)
Query: 529 IQSKLGEGGFGPVYKGRL-LNGQE---VAVKRLSN-QSGQGLKEFKNEMMLIAKLQHRNL 583
I+ +G G FG V +GRL G++ VA+K L + + +EF +E ++ + +H N+
Sbjct: 18 IEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNI 77
Query: 584 VRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ-------- 635
+RL G +++ E+M N +LD FL QL V ++ GIA
Sbjct: 78 IRLEGVVTNSMPVMILTEFMENGALDSFL-RLNDGQFTVIQL-VGMLRGIASGMRYLAEM 135
Query: 636 --------------DQHMNPKISDFGMARMFGGDELQGNTKRIVG---TYGYMSPEYALE 678
+ ++ K+SDFG++R + +G + +PE
Sbjct: 136 SYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAF 195
Query: 679 GVFSVKSDVFSFGVLMLEILS--SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQ 736
F+ SD +S+G++M E++S + + N D N + + L P
Sbjct: 196 RKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYRL----------PPPPD 245
Query: 737 NEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFNLPSPK 783
SL L+ L C Q++ RP VVS ++ + N S K
Sbjct: 246 CPTSLHQLM------LDCWQKDRNARPRFPQVVSALDKMIRNPASLK 286
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 106/234 (45%), Gaps = 49/234 (20%)
Query: 533 LGEGGFGPVY--------KGRLLNGQEVAVKRL-SNQSGQGLKEFKNEMMLIAKL-QHRN 582
LGEG FG V K + +VAVK L S+ + + L + +EM ++ + +H+N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 583 LVRLLGCCIEQGEKILIYEYMVNKSLDVFL-----------FDPTK--------KHLLGW 623
++ LLG C + G +I EY +L +L ++P+ K L+
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 624 QLRV-RIIDGIAQDQHMNP---------------KISDFGMARMFGGDELQGNTKRIVGT 667
+V R ++ +A + ++ KI+DFG+AR + T
Sbjct: 197 AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLP 256
Query: 668 YGYMSPEYALEGVFSVKSDVFSFGVLMLEI--LSSKKNTGVYNTDSFNLL--GH 717
+M+PE + +++ +SDV+SFGVL+ EI L GV + F LL GH
Sbjct: 257 VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGH 310
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 96/207 (46%), Gaps = 32/207 (15%)
Query: 522 AATENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVK--RLSNQSGQGLKEFKNEMMLIAKL 578
+ ENF K+GEG +G VYK R L G+ VA+K RL ++ E+ L+ +L
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 579 QHRNLVRLLGCCIEQGEKILIYEYMVNKSLDV-------------------FLFDPTKKH 619
H N+V+LL + + L++E++ S+D+ +LF +
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 620 LLGWQLRVRIIDGIAQDQHMNP----KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEY 675
RV D Q+ +N K++DFG+AR FG ++ +V T Y +PE
Sbjct: 120 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPEI 177
Query: 676 ALE-GVFSVKSDVFSFGVLMLEILSSK 701
L +S D++S G + E+++ +
Sbjct: 178 LLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 105/213 (49%), Gaps = 33/213 (15%)
Query: 533 LGEGGFGPVYKGRLLNGQE-----VAVKRLSNQ-SGQGLKEFKNEMMLIAKLQHRNLVRL 586
LG G FG VYKG + E VA+K L S + KE +E ++A + + ++ RL
Sbjct: 30 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 587 LGCCIEQGEKILIYEYMVNKSLDVFLFDPT----KKHLLGWQLRV----------RIIDG 632
LG C+ + LI + M L ++ + ++LL W +++ R++
Sbjct: 90 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHR 148
Query: 633 --------IAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVK 684
+ QH+ KI+DFG A++ G +E + + + +M+ E L +++ +
Sbjct: 149 DLAARNVLVKTPQHV--KITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQ 206
Query: 685 SDVFSFGVLMLEILS--SKKNTGVYNTDSFNLL 715
SDV+S+GV + E+++ SK G+ ++ ++L
Sbjct: 207 SDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 239
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 121/287 (42%), Gaps = 50/287 (17%)
Query: 529 IQSKLGEGGFGPVYKGRL-LNGQE---VAVKRLSN-QSGQGLKEFKNEMMLIAKLQHRNL 583
I+ +G G FG V +GRL G++ VA+K L + + +EF +E ++ + +H N+
Sbjct: 20 IEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNI 79
Query: 584 VRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ-------- 635
+RL G +++ E+M N +LD FL QL V ++ GIA
Sbjct: 80 IRLEGVVTNSMPVMILTEFMENGALDSFL-RLNDGQFTVIQL-VGMLRGIASGMRYLAEM 137
Query: 636 --------------DQHMNPKISDFGMARMFGGDELQGNTKRIVG---TYGYMSPEYALE 678
+ ++ K+SDFG++R + +G + +PE
Sbjct: 138 SYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAF 197
Query: 679 GVFSVKSDVFSFGVLMLEILS--SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQ 736
F+ SD +S+G++M E++S + + N D N + + L P
Sbjct: 198 RKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYRL----------PPPPD 247
Query: 737 NEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFNLPSPK 783
SL L+ L C Q++ RP VVS ++ + N S K
Sbjct: 248 CPTSLHQLM------LDCWQKDRNARPRFPQVVSALDKMIRNPASLK 288
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 96/207 (46%), Gaps = 32/207 (15%)
Query: 522 AATENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVK--RLSNQSGQGLKEFKNEMMLIAKL 578
+ ENF K+GEG +G VYK R L G+ VA+K RL ++ E+ L+ +L
Sbjct: 2 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 579 QHRNLVRLLGCCIEQGEKILIYEYMVNKSLDV-------------------FLFDPTKKH 619
H N+V+LL + + L++E++ S+D+ +LF +
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPLIKSYLFQLLQGL 118
Query: 620 LLGWQLRVRIIDGIAQDQHMNP----KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEY 675
RV D Q+ +N K++DFG+AR FG ++ +V T Y +PE
Sbjct: 119 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPEI 176
Query: 676 ALE-GVFSVKSDVFSFGVLMLEILSSK 701
L +S D++S G + E+++ +
Sbjct: 177 LLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 93/196 (47%), Gaps = 30/196 (15%)
Query: 533 LGEGGFGPVYKGRLLNGQ-EVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCI 591
LG+G +G VY GR L+ Q +A+K + + + + E+ L L+H+N+V+ LG
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 75
Query: 592 EQGEKILIYEYMVNKSLDVFL---FDPTK--KHLLGWQLRVRIIDGIA-----QDQHMNP 641
E G + E + SL L + P K + +G+ + +I++G+ Q H +
Sbjct: 76 ENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTK-QILEGLKYLHDNQIVHRDI 134
Query: 642 --------------KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGV--FSVKS 685
KISDFG ++ G + T+ GT YM+PE +G + +
Sbjct: 135 KGDNVLINTYSGVLKISDFGTSKRLAG--INPCTETFTGTLQYMAPEIIDKGPRGYGKAA 192
Query: 686 DVFSFGVLMLEILSSK 701
D++S G ++E+ + K
Sbjct: 193 DIWSLGCTIIEMATGK 208
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 101/212 (47%), Gaps = 37/212 (17%)
Query: 523 ATENFSIQSKLGEGGFGPVYKGRLLN--GQEVAVKRLSNQSGQG---LKEFKNEMML--I 575
A + + +++GEG +G V+K R L G+ VA+KR+ Q+G+ L + +L +
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 576 AKLQHRNLVRLLGCCI-----EQGEKILIYEYMVNKSLDVFLFD------PTK--KHLLG 622
+H N+VRL C + + L++E+ V++ L +L PT+ K ++
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEH-VDQDLTTYLDKVPEPGVPTETIKDMMF 127
Query: 623 WQLR-------VRIIDGIAQDQHM------NPKISDFGMARMFGGDELQGNTKRIVGTYG 669
LR R++ + Q++ K++DFG+AR++ Q +V T
Sbjct: 128 QLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYS---FQMALTSVVVTLW 184
Query: 670 YMSPEYALEGVFSVKSDVFSFGVLMLEILSSK 701
Y +PE L+ ++ D++S G + E+ K
Sbjct: 185 YRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 101/212 (47%), Gaps = 37/212 (17%)
Query: 523 ATENFSIQSKLGEGGFGPVYKGRLLN--GQEVAVKRLSNQSGQG---LKEFKNEMML--I 575
A + + +++GEG +G V+K R L G+ VA+KR+ Q+G+ L + +L +
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 576 AKLQHRNLVRLLGCCI-----EQGEKILIYEYMVNKSLDVFLFD------PTK--KHLLG 622
+H N+VRL C + + L++E+ V++ L +L PT+ K ++
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEH-VDQDLTTYLDKVPEPGVPTETIKDMMF 127
Query: 623 WQLR-------VRIIDGIAQDQHM------NPKISDFGMARMFGGDELQGNTKRIVGTYG 669
LR R++ + Q++ K++DFG+AR++ Q +V T
Sbjct: 128 QLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYS---FQMALTSVVVTLW 184
Query: 670 YMSPEYALEGVFSVKSDVFSFGVLMLEILSSK 701
Y +PE L+ ++ D++S G + E+ K
Sbjct: 185 YRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 104/216 (48%), Gaps = 41/216 (18%)
Query: 533 LGEGGFGPVYKGRLL----NGQEVAVKRLSNQSG-QGLKEFKNEMMLIAKLQHRNLVRLL 587
+G+G FG VY G + N + A+K LS + Q ++ F E +L+ L H N++ L+
Sbjct: 29 IGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALI 88
Query: 588 GCCIE-QGEKILIYEYMVNKSLDVFLF----DPTKKHLLGWQLRV-RIIDGIAQ------ 635
G + +G ++ YM + L F+ +PT K L+ + L+V R ++ +A+
Sbjct: 89 GIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHR 148
Query: 636 ---------DQHMNPKISDFGMARMFGGDEL----QGNTKRIVGTYGYMSPEYALEGV-- 680
D+ K++DFG+AR E Q R+ + ALE +
Sbjct: 149 DLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWT------ALESLQT 202
Query: 681 --FSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNL 714
F+ KSDV+SFGVL+ E+L ++ + D F+L
Sbjct: 203 YRFTTKSDVWSFGVLLWELL-TRGAPPYRHIDPFDL 237
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 104/217 (47%), Gaps = 41/217 (18%)
Query: 533 LGEGGFGPVYKGRLLNGQE-----VAVKRLSNQ-SGQGLKEFKNEMMLIAKLQHRNLVRL 586
L G FG VYKG + E VA+K L S + KE +E ++A + + ++ RL
Sbjct: 23 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 587 LGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKH--------LLGWQLRV----------R 628
LG C+ + LI + M L D ++H LL W +++ R
Sbjct: 83 LGICLTSTVQ-LITQLMPFGCL----LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 137
Query: 629 IIDG--------IAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGV 680
++ + QH+ KI+DFG+A++ G +E + + + +M+ E L +
Sbjct: 138 LVHRDLAARNVLVKTPQHV--KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 195
Query: 681 FSVKSDVFSFGVLMLEILS--SKKNTGVYNTDSFNLL 715
++ +SDV+S+GV + E+++ SK G+ ++ ++L
Sbjct: 196 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 232
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 99/207 (47%), Gaps = 34/207 (16%)
Query: 523 ATENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVK--RLSNQSGQGLKEFKNEMMLIAKLQ 579
+ ENF K+GEG +G VYK R L G+ VA+K RL ++ E+ L+ +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 580 HRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRV------RIIDGI 633
H N+V+LL + + L++E++ ++ L F+ L G L + +++ G+
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKDFM---DASALTGIPLPLIKSYLFQLLQGL 116
Query: 634 A-------QDQHMNP-----------KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEY 675
A + + P K++DFG+AR FG ++ +V T Y +PE
Sbjct: 117 AFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPEI 174
Query: 676 ALE-GVFSVKSDVFSFGVLMLEILSSK 701
L +S D++S G + E+++ +
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 105/219 (47%), Gaps = 45/219 (20%)
Query: 533 LGEGGFGPVYKGRLLNGQE-----VAVKRLSNQ-SGQGLKEFKNEMMLIAKLQHRNLVRL 586
L G FG VYKG + E VA+K L S + KE +E ++A + + ++ RL
Sbjct: 30 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 587 LGCCIEQGEKILIYEYMVNKSLDVF--LFDPTKKH--------LLGWQLRV--------- 627
LG C+ ++++ L F L D ++H LL W +++
Sbjct: 90 LGICLTSTVQLIM-------QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 142
Query: 628 -RIIDG--------IAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALE 678
R++ + QH+ KI+DFG+A++ G +E + + + +M+ E L
Sbjct: 143 RRLVHRDLAARNVLVKTPQHV--KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 200
Query: 679 GVFSVKSDVFSFGVLMLEILS--SKKNTGVYNTDSFNLL 715
+++ +SDV+S+GV + E+++ SK G+ ++ ++L
Sbjct: 201 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 239
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 104/217 (47%), Gaps = 41/217 (18%)
Query: 533 LGEGGFGPVYKGRLLNGQE-----VAVKRLSNQ-SGQGLKEFKNEMMLIAKLQHRNLVRL 586
LG G FG VYKG + E VA+ L S + KE +E ++A + + ++ RL
Sbjct: 57 LGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVCRL 116
Query: 587 LGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKH--------LLGWQLRV----------R 628
LG C+ + LI + M L D ++H LL W +++ R
Sbjct: 117 LGICLTSTVQ-LITQLMPFGCL----LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 171
Query: 629 IIDG--------IAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGV 680
++ + QH+ KI+DFG+A++ G +E + + + +M+ E L +
Sbjct: 172 LVHRDLAARNVLVKTPQHV--KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 229
Query: 681 FSVKSDVFSFGVLMLEILS--SKKNTGVYNTDSFNLL 715
++ +SDV+S+GV + E+++ SK G+ ++ ++L
Sbjct: 230 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 266
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 106/243 (43%), Gaps = 51/243 (20%)
Query: 525 ENFSIQSKLGEGGFGPVY--------KGRLLNGQEVAVKRLSNQSGQ-GLKEFKNEMMLI 575
+ ++ LGEG FG V K + VAVK L + + + L + +EM ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 576 AKL-QHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFL-----------FDPTK------ 617
+ +H+N++ LLG C + G +I Y +L +L +D +
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 618 --KHLLG--WQLRVRIIDGIAQDQHMNP---------------KISDFGMARMFGGDELQ 658
K L+ +QL R ++ +A + ++ KI+DFG+AR +
Sbjct: 155 TFKDLVSCTYQL-ARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYY 213
Query: 659 GNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEI--LSSKKNTGVYNTDSFNLL- 715
T +M+PE + V++ +SDV+SFGVLM EI L G+ + F LL
Sbjct: 214 KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLK 273
Query: 716 -GH 717
GH
Sbjct: 274 EGH 276
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 104/217 (47%), Gaps = 41/217 (18%)
Query: 533 LGEGGFGPVYKGRLLNGQE-----VAVKRLSNQ-SGQGLKEFKNEMMLIAKLQHRNLVRL 586
L G FG VYKG + E VA+K L S + KE +E ++A + + ++ RL
Sbjct: 30 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 587 LGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKH--------LLGWQLRV----------R 628
LG C+ + LI + M L D ++H LL W +++ R
Sbjct: 90 LGICLTSTVQ-LITQLMPFGCL----LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 144
Query: 629 IIDG--------IAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGV 680
++ + QH+ KI+DFG+A++ G +E + + + +M+ E L +
Sbjct: 145 LVHRDLAARNVLVKTPQHV--KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 202
Query: 681 FSVKSDVFSFGVLMLEILS--SKKNTGVYNTDSFNLL 715
++ +SDV+S+GV + E+++ SK G+ ++ ++L
Sbjct: 203 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 239
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 88/198 (44%), Gaps = 26/198 (13%)
Query: 525 ENFSIQSKLGEGGFGPVY--KGRLLNGQEVAVKRL---SNQSGQGLKEFKNEMMLIAKLQ 579
E + I KLG GG VY + +LN + VA+K + + + LK F+ E+ ++L
Sbjct: 11 ERYKIVDKLGGGGMSTVYLAEDTILNIK-VAIKAIFIPPREKEETLKRFEREVHNSSQLS 69
Query: 580 HRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHL-LGWQLRVRIIDGIAQ--- 635
H+N+V ++ E L+ EY+ +L ++ + +I+DGI
Sbjct: 70 HQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHD 129
Query: 636 ---------------DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGV 680
D + KI DFG+A+ L T ++GT Y SPE A
Sbjct: 130 MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLT-QTNHVLGTVQYFSPEQAKGEA 188
Query: 681 FSVKSDVFSFGVLMLEIL 698
+D++S G+++ E+L
Sbjct: 189 TDECTDIYSIGIVLYEML 206
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 91/198 (45%), Gaps = 26/198 (13%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQS---GQGLKEFKNEMMLIAKLQH 580
E+F + + LG+G F VY+ ++ G EVA+K + ++ ++ +NE+ + +L+H
Sbjct: 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKH 70
Query: 581 RNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTK-------KHLL------------ 621
+++ L + L+ E N ++ +L + K +H +
Sbjct: 71 PSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHS 130
Query: 622 -GWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGV 680
G R + + ++MN KI+DFG+A + T + GT Y+SPE A
Sbjct: 131 HGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT--LCGTPNYISPEIATRSA 188
Query: 681 FSVKSDVFSFGVLMLEIL 698
++SDV+S G + +L
Sbjct: 189 HGLESDVWSLGCMFYTLL 206
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 106/243 (43%), Gaps = 51/243 (20%)
Query: 525 ENFSIQSKLGEGGFGPVY--------KGRLLNGQEVAVKRLSNQSGQ-GLKEFKNEMMLI 575
+ ++ LGEG FG V K + VAVK L + + + L + +EM ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 576 AKL-QHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFL-----------FDPTK------ 617
+ +H+N++ LLG C + G +I Y +L +L +D +
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 618 --KHLLG--WQLRVRIIDGIAQDQHMNP---------------KISDFGMARMFGGDELQ 658
K L+ +QL R ++ +A + ++ KI+DFG+AR +
Sbjct: 155 TFKDLVSCTYQL-ARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYY 213
Query: 659 GNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEI--LSSKKNTGVYNTDSFNLL- 715
T +M+PE + V++ +SDV+SFGVLM EI L G+ + F LL
Sbjct: 214 KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLK 273
Query: 716 -GH 717
GH
Sbjct: 274 EGH 276
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 95/198 (47%), Gaps = 22/198 (11%)
Query: 526 NFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVR 585
++ ++G G FG VYKG+ V + ++ + Q L+ FKNE+ ++ K +H N++
Sbjct: 14 QITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 73
Query: 586 LLGCCIE----------QGEKILIYEYMVNKSLDVF-LFDPTKKHLLGWQ-LRVRII--- 630
+G + +G + + +++ ++ L D ++ G L + I
Sbjct: 74 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHR 133
Query: 631 ----DGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYAL---EGVFSV 683
+ I + + KI DFG+A + +++ G+ +M+PE + +S
Sbjct: 134 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 193
Query: 684 KSDVFSFGVLMLEILSSK 701
+SDV++FG+++ E+++ +
Sbjct: 194 QSDVYAFGIVLYELMTGQ 211
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 95/198 (47%), Gaps = 22/198 (11%)
Query: 526 NFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVR 585
++ ++G G FG VYKG+ V + ++ + Q L+ FKNE+ ++ K +H N++
Sbjct: 11 QITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 70
Query: 586 LLGCCIE----------QGEKILIYEYMVNKSLDVF-LFDPTKKHLLGWQ-LRVRII--- 630
+G + +G + + +++ ++ L D ++ G L + I
Sbjct: 71 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHR 130
Query: 631 ----DGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYAL---EGVFSV 683
+ I + + KI DFG+A + +++ G+ +M+PE + +S
Sbjct: 131 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 190
Query: 684 KSDVFSFGVLMLEILSSK 701
+SDV++FG+++ E+++ +
Sbjct: 191 QSDVYAFGIVLYELMTGQ 208
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 95/198 (47%), Gaps = 22/198 (11%)
Query: 526 NFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVR 585
++ ++G G FG VYKG+ V + ++ + Q L+ FKNE+ ++ K +H N++
Sbjct: 9 QITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 68
Query: 586 LLGCCIE----------QGEKILIYEYMVNKSLDVF-LFDPTKKHLLGWQ-LRVRII--- 630
+G + +G + + +++ ++ L D ++ G L + I
Sbjct: 69 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHR 128
Query: 631 ----DGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYAL---EGVFSV 683
+ I + + KI DFG+A + +++ G+ +M+PE + +S
Sbjct: 129 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 188
Query: 684 KSDVFSFGVLMLEILSSK 701
+SDV++FG+++ E+++ +
Sbjct: 189 QSDVYAFGIVLYELMTGQ 206
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 95/198 (47%), Gaps = 22/198 (11%)
Query: 526 NFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVR 585
++ ++G G FG VYKG+ V + ++ + Q L+ FKNE+ ++ K +H N++
Sbjct: 14 QITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 73
Query: 586 LLGCCIE----------QGEKILIYEYMVNKSLDVF-LFDPTKKHLLGWQ-LRVRII--- 630
+G + +G + + +++ ++ L D ++ G L + I
Sbjct: 74 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHR 133
Query: 631 ----DGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYAL---EGVFSV 683
+ I + + KI DFG+A + +++ G+ +M+PE + +S
Sbjct: 134 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 193
Query: 684 KSDVFSFGVLMLEILSSK 701
+SDV++FG+++ E+++ +
Sbjct: 194 QSDVYAFGIVLYELMTGQ 211
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 120/294 (40%), Gaps = 72/294 (24%)
Query: 527 FSIQSKLGEGGFGPVYKGRL-LNGQE---VAVKRLS-NQSGQGLKEFKNEMMLIAKLQHR 581
I+ +G G FG V GRL L G+ VA+K L + + ++F E ++ + H
Sbjct: 45 IKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHP 104
Query: 582 NLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKH---------------------- 619
N+V L G +++ E+M N +LD FL +KH
Sbjct: 105 NVVHLEGVVTRGKPVMIVIEFMENGALDAFL----RKHDGQFTVIQLVGMLRGIAAGMRY 160
Query: 620 --LLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYG------YM 671
+G+ R I + ++ K+SDFG++R+ ++ + + + T G +
Sbjct: 161 LADMGYVHRDLAARNILVNSNLVCKVSDFGLSRV-----IEDDPEAVYTTTGGKIPVRWT 215
Query: 672 SPEYALEGVFSVKSDVFSFGVLMLEILSSKKNT--GVYNTDSFNLLGHAWSL-----CKN 724
+PE F+ SDV+S+G++M E++S + + N D + + L C
Sbjct: 216 APEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPAPMDCPA 275
Query: 725 DRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFN 778
H+LM L C Q+ +RP +V +++ + N
Sbjct: 276 G-LHQLM--------------------LDCWQKERAERPKFEQIVGILDKMIRN 308
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 97/202 (48%), Gaps = 30/202 (14%)
Query: 526 NFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVR 585
++ ++G G FG VYKG+ V + ++ + Q L+ FKNE+ ++ K +H N++
Sbjct: 29 QITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 88
Query: 586 LLGCCIE----------QGEKILIYEYMVNKSLDVF-LFDPTKKHLLGWQ-LRVRII--- 630
+G + +G + + +++ ++ L D ++ G L + I
Sbjct: 89 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHR 148
Query: 631 ----DGIAQDQHMNPKISDFGMA----RMFGGDELQGNTKRIVGTYGYMSPEYAL---EG 679
+ I + + KI DFG+A R G + + ++ G+ +M+PE +
Sbjct: 149 DLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFE----QLSGSILWMAPEVIRMQDKN 204
Query: 680 VFSVKSDVFSFGVLMLEILSSK 701
+S +SDV++FG+++ E+++ +
Sbjct: 205 PYSFQSDVYAFGIVLYELMTGQ 226
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 95/198 (47%), Gaps = 22/198 (11%)
Query: 526 NFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVR 585
++ ++G G FG VYKG+ V + ++ + Q L+ FKNE+ ++ K +H N++
Sbjct: 37 QITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 96
Query: 586 LLGCCIE----------QGEKILIYEYMVNKSLDVF-LFDPTKKHLLGWQ-LRVRII--- 630
+G + +G + + +++ ++ L D ++ G L + I
Sbjct: 97 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHR 156
Query: 631 ----DGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYAL---EGVFSV 683
+ I + + KI DFG+A + +++ G+ +M+PE + +S
Sbjct: 157 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 216
Query: 684 KSDVFSFGVLMLEILSSK 701
+SDV++FG+++ E+++ +
Sbjct: 217 QSDVYAFGIVLYELMTGQ 234
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 95/198 (47%), Gaps = 22/198 (11%)
Query: 526 NFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVR 585
++ ++G G FG VYKG+ V + ++ + Q L+ FKNE+ ++ K +H N++
Sbjct: 36 QITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 95
Query: 586 LLGCCIE----------QGEKILIYEYMVNKSLDVF-LFDPTKKHLLGWQ-LRVRII--- 630
+G + +G + + +++ ++ L D ++ G L + I
Sbjct: 96 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHR 155
Query: 631 ----DGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYAL---EGVFSV 683
+ I + + KI DFG+A + +++ G+ +M+PE + +S
Sbjct: 156 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 215
Query: 684 KSDVFSFGVLMLEILSSK 701
+SDV++FG+++ E+++ +
Sbjct: 216 QSDVYAFGIVLYELMTGQ 233
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 94/198 (47%), Gaps = 22/198 (11%)
Query: 526 NFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVR 585
++ ++G G FG VYKG+ V + ++ + Q L+ FKNE+ ++ K +H N++
Sbjct: 9 QITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 68
Query: 586 LLGCCIE----------QGEKILIYEYMVNKSLDVF-LFDPTKKHLLGWQ-LRVRII--- 630
+G +G + + +++ ++ L D ++ G L + I
Sbjct: 69 FMGYSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHR 128
Query: 631 ----DGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYAL---EGVFSV 683
+ I + + KI DFG+A + +++ G+ +M+PE + +S
Sbjct: 129 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 188
Query: 684 KSDVFSFGVLMLEILSSK 701
+SDV++FG+++ E+++ +
Sbjct: 189 QSDVYAFGIVLYELMTGQ 206
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 97/202 (48%), Gaps = 30/202 (14%)
Query: 526 NFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVR 585
++ ++G G FG VYKG+ V + ++ + Q L+ FKNE+ ++ K +H N++
Sbjct: 9 QITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 68
Query: 586 LLGCCIE----------QGEKILIYEYMVNKSLDVF-LFDPTKKHLLGWQ-LRVRII--- 630
+G + +G + + +++ ++ L D ++ G L + I
Sbjct: 69 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHR 128
Query: 631 ----DGIAQDQHMNPKISDFGMA----RMFGGDELQGNTKRIVGTYGYMSPEYAL---EG 679
+ I + + KI DFG+A R G + + ++ G+ +M+PE +
Sbjct: 129 DLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFE----QLSGSILWMAPEVIRMQDKN 184
Query: 680 VFSVKSDVFSFGVLMLEILSSK 701
+S +SDV++FG+++ E+++ +
Sbjct: 185 PYSFQSDVYAFGIVLYELMTGQ 206
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 97/202 (48%), Gaps = 30/202 (14%)
Query: 526 NFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVR 585
++ ++G G FG VYKG+ V + ++ + Q L+ FKNE+ ++ K +H N++
Sbjct: 37 QITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 96
Query: 586 LLGCCIE----------QGEKILIYEYMVNKSLDVF-LFDPTKKHLLGWQ-LRVRII--- 630
+G + +G + + +++ ++ L D ++ G L + I
Sbjct: 97 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHR 156
Query: 631 ----DGIAQDQHMNPKISDFGMA----RMFGGDELQGNTKRIVGTYGYMSPEYAL---EG 679
+ I + + KI DFG+A R G + + ++ G+ +M+PE +
Sbjct: 157 DLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFE----QLSGSILWMAPEVIRMQDKN 212
Query: 680 VFSVKSDVFSFGVLMLEILSSK 701
+S +SDV++FG+++ E+++ +
Sbjct: 213 PYSFQSDVYAFGIVLYELMTGQ 234
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 114/279 (40%), Gaps = 45/279 (16%)
Query: 523 ATENFSIQSKLGEGGFGPVYKGRLLNGQ----EVAVKRLSNQSGQGLKE-FKNEMMLIAK 577
A E+ + LGEG FG VY+G N + VAVK KE F +E +++
Sbjct: 6 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 65
Query: 578 LQHRNLVRLLGCCIEQGEKILIYEYMVNK----------SLDVFLFDPTKKHLLGWQLRV 627
L H ++V+L+G E+ I++ Y + SL V + +
Sbjct: 66 LDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYL 125
Query: 628 RIIDGIAQDQHMN---------PKISDFGMARMF-GGDELQGNTKRIVGTYGYMSPEYAL 677
I+ + +D + K+ DFG++R D + + R+ +MSPE
Sbjct: 126 ESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL--PIKWMSPESIN 183
Query: 678 EGVFSVKSDVFSFGVLMLEILSSKKNTGVY--NTDSFNLLGHAWSLCKNDRAHELMDPVL 735
F+ SDV+ F V M EILS K + N D +L L K D L PVL
Sbjct: 184 FRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPD----LCPPVL 239
Query: 736 QNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774
++ R C + DRP +++V +++
Sbjct: 240 YT-----LMTR-------CWDYDPSDRPRFTELVCSLSD 266
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 114/279 (40%), Gaps = 45/279 (16%)
Query: 523 ATENFSIQSKLGEGGFGPVYKGRLLNGQ----EVAVKRLSNQSGQGLKE-FKNEMMLIAK 577
A E+ + LGEG FG VY+G N + VAVK KE F +E +++
Sbjct: 22 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 81
Query: 578 LQHRNLVRLLGCCIEQGEKILIYEYMVNK----------SLDVFLFDPTKKHLLGWQLRV 627
L H ++V+L+G E+ I++ Y + SL V + +
Sbjct: 82 LDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYL 141
Query: 628 RIIDGIAQDQHMN---------PKISDFGMARMF-GGDELQGNTKRIVGTYGYMSPEYAL 677
I+ + +D + K+ DFG++R D + + R+ +MSPE
Sbjct: 142 ESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL--PIKWMSPESIN 199
Query: 678 EGVFSVKSDVFSFGVLMLEILSSKKNTGVY--NTDSFNLLGHAWSLCKNDRAHELMDPVL 735
F+ SDV+ F V M EILS K + N D +L L K D L PVL
Sbjct: 200 FRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPD----LCPPVL 255
Query: 736 QNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774
++ R C + DRP +++V +++
Sbjct: 256 YT-----LMTR-------CWDYDPSDRPRFTELVCSLSD 282
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 127/283 (44%), Gaps = 46/283 (16%)
Query: 529 IQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLG 588
+ +++G G FG VYKG+ V + ++ + + + + F+NE+ ++ K +H N++ +G
Sbjct: 40 LSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMG 99
Query: 589 CCIE----------QGEKILIYEYMVNKSLDVF-LFDPTKKHLLGWQ-LRVRII------ 630
+ +G + + ++ +F L D ++ G L + I
Sbjct: 100 YMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMK 159
Query: 631 -DGIAQDQHMNPKISDFGMA----RMFGGDELQGNTKRIVGTYGYMSPEYAL---EGVFS 682
+ I + + KI DFG+A R G +++ T G+ +M+PE FS
Sbjct: 160 SNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPT----GSVLWMAPEVIRMQDNNPFS 215
Query: 683 VKSDVFSFGVLMLEILSSK-KNTGVYNTDSFN-LLGHAWSLCKNDRAHELMDPVLQNEVS 740
+SDV+S+G+++ E+++ + + + N D ++G ++ + ++ ++ V+
Sbjct: 216 FQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVA 275
Query: 741 LPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFNLPSPK 783
CV++ E+RP ++S I EL PK
Sbjct: 276 ------------DCVKKVKEERPLFPQILSSI--ELLQHSLPK 304
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 114/279 (40%), Gaps = 45/279 (16%)
Query: 523 ATENFSIQSKLGEGGFGPVYKGRLLNGQ----EVAVKRLSNQSGQGLKE-FKNEMMLIAK 577
A E+ + LGEG FG VY+G N + VAVK KE F +E +++
Sbjct: 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 69
Query: 578 LQHRNLVRLLGCCIEQGEKILIYEYMVNK----------SLDVFLFDPTKKHLLGWQLRV 627
L H ++V+L+G E+ I++ Y + SL V + +
Sbjct: 70 LDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYL 129
Query: 628 RIIDGIAQDQHMN---------PKISDFGMARMF-GGDELQGNTKRIVGTYGYMSPEYAL 677
I+ + +D + K+ DFG++R D + + R+ +MSPE
Sbjct: 130 ESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL--PIKWMSPESIN 187
Query: 678 EGVFSVKSDVFSFGVLMLEILSSKKNTGVY--NTDSFNLLGHAWSLCKNDRAHELMDPVL 735
F+ SDV+ F V M EILS K + N D +L L K D L PVL
Sbjct: 188 FRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPD----LCPPVL 243
Query: 736 QNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774
++ R C + DRP +++V +++
Sbjct: 244 YT-----LMTR-------CWDYDPSDRPRFTELVCSLSD 270
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 89/235 (37%), Gaps = 70/235 (29%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLN------GQEVAVKRLSNQSGQGLKE-FKNEMMLIAK 577
EN LG G FG V +VAVK L ++ +E +E+ ++ +
Sbjct: 45 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQ 104
Query: 578 L-QHRNLVRLLGCCIEQG------------------------------------------ 594
L H N+V LLG C G
Sbjct: 105 LGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEE 164
Query: 595 -------EKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQDQHMNPKISDFG 647
E +L + Y V K ++ F L + V + G KI DFG
Sbjct: 165 DLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAAR-NVLVTHGKV------VKICDFG 217
Query: 648 MARMFGGDE---LQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS 699
+AR D ++GN + V +M+PE EG++++KSDV+S+G+L+ EI S
Sbjct: 218 LARDIMSDSNYVVRGNARLPVK---WMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 119/282 (42%), Gaps = 53/282 (18%)
Query: 533 LGEGGFG--------PVYKGRLLNGQEVAVKRLSNQSG-QGLKEFKNEMMLIAKLQHRNL 583
LGEG FG P G G+ VAVK L +G Q +K E+ ++ L H ++
Sbjct: 39 LGEGHFGKVSLYCYDPTNDG---TGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHI 95
Query: 584 VRLLGCCIEQGEKIL--IYEYMVNKSLDVFLFDPTKKHLLGW-QLRV---RIIDGIA--Q 635
++ GCC + G L + EY+ SL +L +H +G QL + +I +G+A
Sbjct: 96 IKYKGCCEDAGAASLQLVMEYVPLGSLRDYL----PRHSIGLAQLLLFAQQICEGMAYLH 151
Query: 636 DQHMNP----------------KISDFGMARMFGGDELQGNTKRIVGTYG-----YMSPE 674
QH KI DFG+A+ +G+ V G + +PE
Sbjct: 152 AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVP----EGHEXYRVREDGDSPVFWYAPE 207
Query: 675 YALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMD-- 732
E F SDV+SFGV + E+L+ ++ T L+G A R EL++
Sbjct: 208 CLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERG 267
Query: 733 PVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINN 774
L P V ++ C + A RPT +++ ++
Sbjct: 268 ERLPRPDKCPAEVYHLMKN--CWETEASFRPTFENLIPILKT 307
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 88/200 (44%), Gaps = 22/200 (11%)
Query: 524 TENFSIQSKLGEGGFGPVYKG-RLLNGQEVAVKRLSNQSGQGLKE-FKNEMMLIAKLQHR 581
E++ + LGEG +G V + + VAVK + + E K E+ + A L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHE 65
Query: 582 NLVRLLGCCIEQGEKILIYEYMVNKSL------DVFLFDPTKK-------------HLLG 622
N+V+ G E + L EY L D+ + +P + H +G
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 623 WQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFS 682
R + + D+ N KISDFG+A +F + + ++ GT Y++PE F
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 683 VKS-DVFSFGVLMLEILSSK 701
+ DV+S G+++ +L+ +
Sbjct: 186 AEPVDVWSCGIVLTAMLAGE 205
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 93/219 (42%), Gaps = 46/219 (21%)
Query: 525 ENFSIQSKLGEGGFGPVYKG------RLLNGQEVAVKRLSNQSGQGLKEFKNEM----ML 574
+ + LG G FG V + + + VAVK L + G E + M +L
Sbjct: 29 DRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKML--KEGATHSEHRALMSELKIL 86
Query: 575 IAKLQHRNLVRLLGCCIEQGEKILIY------------------EYMVNKSLDVFLFDPT 616
I H N+V LLG C + G +++ E++ K D++ T
Sbjct: 87 IHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLT 146
Query: 617 KKHLLGWQLRV-RIIDGIAQDQHMNP---------------KISDFGMARMFGGDELQGN 660
+HL+ + +V + ++ +A + ++ KI DFG+AR D
Sbjct: 147 LEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 206
Query: 661 TKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS 699
+M+PE + V++++SDV+SFGVL+ EI S
Sbjct: 207 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 89/212 (41%), Gaps = 34/212 (16%)
Query: 519 SVTAATENFSIQ-----SKLGEGGFGPVYKG-RLLNGQEVAVKRLS-NQSGQGLKEFK-N 570
SV+AA SI +KLGEG +G VYK + + VA+KR+ +G+
Sbjct: 23 SVSAAPSATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIR 82
Query: 571 EMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRII 630
E+ L+ +LQHRN++ L LI+EY N +P + ++I
Sbjct: 83 EVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAENDLKKYMDKNPDVSMRVIKSFLYQLI 142
Query: 631 DGI---------------------AQDQHMNP--KISDFGMARMFGGDELQGNTKRIVGT 667
+G+ D P KI DFG+AR F G ++ T I+ T
Sbjct: 143 NGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAF-GIPIRQFTHEII-T 200
Query: 668 YGYMSPEYALEGV-FSVKSDVFSFGVLMLEIL 698
Y PE L +S D++S + E+L
Sbjct: 201 LWYRPPEILLGSRHYSTSVDIWSIACIWAEML 232
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 97/202 (48%), Gaps = 34/202 (16%)
Query: 525 ENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNL 583
E + I +LG+G FG VYK + G A K + +S + L+++ E+ ++A H +
Sbjct: 11 EVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYI 70
Query: 584 VRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRV---------------R 628
V+LLG G+ ++ E+ ++D + + + L Q++V R
Sbjct: 71 VKLLGAYYHDGKLWIMIEFCPGGAVDAIMLE-LDRGLTEPQIQVVCRQMLEALNFLHSKR 129
Query: 629 II--DGIAQDQHM----NPKISDFGMARMFGGDELQGNTKR--IVGTYGYMSPEYAL--- 677
II D A + M + +++DFG++ L+ KR +GT +M+PE +
Sbjct: 130 IIHRDLKAGNVLMTLEGDIRLADFGVS----AKNLKTLQKRDSFIGTPYWMAPEVVMCET 185
Query: 678 --EGVFSVKSDVFSFGVLMLEI 697
+ + K+D++S G+ ++E+
Sbjct: 186 MKDTPYDYKADIWSLGITLIEM 207
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 95/217 (43%), Gaps = 44/217 (20%)
Query: 525 ENFSIQSKLGEGGFGPVYKG------RLLNGQEVAVKRLSNQSGQGLKEFKNEM----ML 574
+ ++ LG G FG V + + + VAVK L + G E + M +L
Sbjct: 27 DRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKML--KEGATHSEHRALMSELKIL 84
Query: 575 IAKLQHRNLVRLLGCCIEQGEKIL-IYEYMVNKSLDVFL------FDPTK---------K 618
I H N+V LLG C + G ++ I E+ +L +L F P K +
Sbjct: 85 IHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLE 144
Query: 619 HLLGWQLRV-RIIDGIAQDQHMNP---------------KISDFGMARMFGGDELQGNTK 662
HL+ + +V + ++ +A + ++ KI DFG+AR D
Sbjct: 145 HLICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 204
Query: 663 RIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS 699
+M+PE + V++++SDV+SFGVL+ EI S
Sbjct: 205 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 95/217 (43%), Gaps = 44/217 (20%)
Query: 525 ENFSIQSKLGEGGFGPVYKG------RLLNGQEVAVKRLSNQSGQGLKEFKNEM----ML 574
+ ++ LG G FG V + + + VAVK L + G E + M +L
Sbjct: 27 DRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKML--KEGATHSEHRALMSELKIL 84
Query: 575 IAKLQHRNLVRLLGCCIEQGEKIL-IYEYMVNKSLDVFL------FDPTK---------K 618
I H N+V LLG C + G ++ I E+ +L +L F P K +
Sbjct: 85 IHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLE 144
Query: 619 HLLGWQLRV-RIIDGIAQDQHMNP---------------KISDFGMARMFGGDELQGNTK 662
HL+ + +V + ++ +A + ++ KI DFG+AR D
Sbjct: 145 HLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKG 204
Query: 663 RIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS 699
+M+PE + V++++SDV+SFGVL+ EI S
Sbjct: 205 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 97/202 (48%), Gaps = 34/202 (16%)
Query: 525 ENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNL 583
E + I +LG+G FG VYK + G A K + +S + L+++ E+ ++A H +
Sbjct: 19 EVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYI 78
Query: 584 VRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRV---------------R 628
V+LLG G+ ++ E+ ++D + + + L Q++V R
Sbjct: 79 VKLLGAYYHDGKLWIMIEFCPGGAVDAIMLE-LDRGLTEPQIQVVCRQMLEALNFLHSKR 137
Query: 629 II--DGIAQDQHM----NPKISDFGMARMFGGDELQGNTKR--IVGTYGYMSPEYAL--- 677
II D A + M + +++DFG++ L+ KR +GT +M+PE +
Sbjct: 138 IIHRDLKAGNVLMTLEGDIRLADFGVS----AKNLKTLQKRDSFIGTPYWMAPEVVMCET 193
Query: 678 --EGVFSVKSDVFSFGVLMLEI 697
+ + K+D++S G+ ++E+
Sbjct: 194 MKDTPYDYKADIWSLGITLIEM 215
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 96/210 (45%), Gaps = 35/210 (16%)
Query: 522 AATENFSIQSKLGEGGFGPVYKGRLLN---GQEVAVKRLSNQSGQGLKEFK-NEMMLIAK 577
+++ F KLG G + VYKG LN G VA+K + S +G E+ L+ +
Sbjct: 2 SSSSQFKQLEKLGNGTYATVYKG--LNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKE 59
Query: 578 LQHRNLVRLLGCCIEQGEKILIYEYMVN---KSLDVFLFDPTKKHL-------LGWQL-- 625
L+H N+VRL + + L++E+M N K +D T + L WQL
Sbjct: 60 LKHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQ 119
Query: 626 --------RVRIIDGIAQDQHMNP----KISDFGMARMFGGDELQGNT-KRIVGTYGYMS 672
++ D Q+ +N K+ DFG+AR FG + NT V T Y +
Sbjct: 120 GLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFG---IPVNTFSSEVVTLWYRA 176
Query: 673 PEYAL-EGVFSVKSDVFSFGVLMLEILSSK 701
P+ + +S D++S G ++ E+++ K
Sbjct: 177 PDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 98/227 (43%), Gaps = 41/227 (18%)
Query: 531 SKLGEGGFGPVYKGRLL-----NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVR 585
S+LG+G FG V R G VAVK+L + ++F+ E+ ++ L +V+
Sbjct: 13 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 72
Query: 586 LLGCCIEQG--EKILIYEYMVNKSLDVFL------FDPTKKHLLGWQL------------ 625
G G E L+ EY+ + L FL D ++ L Q+
Sbjct: 73 YRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRC 132
Query: 626 --RVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYG-----YMSPEYALE 678
R I + + KI+DFG+A++ D+ +V G + +PE +
Sbjct: 133 VHRDLAARNILVESEAHVKIADFGLAKLLPLDK----DXXVVREPGQSPIFWYAPESLSD 188
Query: 679 GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKND 725
+FS +SDV+SFGV++ E+ + + + + ++G C+ D
Sbjct: 189 NIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMG-----CERD 230
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 87/200 (43%), Gaps = 22/200 (11%)
Query: 524 TENFSIQSKLGEGGFGPVYKG-RLLNGQEVAVKRLSNQSGQGLKE-FKNEMMLIAKLQHR 581
E++ + LGEG +G V + + VAVK + + E K E+ + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 582 NLVRLLGCCIEQGEKILIYEYMVNKSL------DVFLFDPTKK-------------HLLG 622
N+V+ G E + L EY L D+ + +P + H +G
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 623 WQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFS 682
R + + D+ N KISDFG+A +F + + ++ GT Y++PE F
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 683 VKS-DVFSFGVLMLEILSSK 701
+ DV+S G+++ +L+ +
Sbjct: 186 AEPVDVWSCGIVLTAMLAGE 205
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 97/215 (45%), Gaps = 34/215 (15%)
Query: 515 FSFASVTA---ATENFSIQSK---LGEGGFGPVYK-GRLLNGQEVAVKRLSNQSGQGLKE 567
F VTA A +F SK LG G FG V+K G ++A K + + + +E
Sbjct: 73 FDHRIVTAKQGAVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEE 132
Query: 568 FKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEY---------MVNKS-----LDVFLF 613
KNE+ ++ +L H NL++L + + +L+ EY ++++S LD LF
Sbjct: 133 VKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILF 192
Query: 614 ---------DPTKKHLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRI 664
+ ++L L+ I + +D KI DFG+AR + E K
Sbjct: 193 MKQICEGIRHMHQMYILHLDLKPENILCVNRDAK-QIKIIDFGLARRYKPRE---KLKVN 248
Query: 665 VGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS 699
GT +++PE S +D++S GV+ +LS
Sbjct: 249 FGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLS 283
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 87/200 (43%), Gaps = 22/200 (11%)
Query: 524 TENFSIQSKLGEGGFGPVYKG-RLLNGQEVAVKRLSNQSGQGLKE-FKNEMMLIAKLQHR 581
E++ + LGEG +G V + + VAVK + + E K E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 582 NLVRLLGCCIEQGEKILIYEYMVNKSL------DVFLFDPTKK-------------HLLG 622
N+V+ G E + L EY L D+ + +P + H +G
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 623 WQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFS 682
R + + D+ N KISDFG+A +F + + ++ GT Y++PE F
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 683 VKS-DVFSFGVLMLEILSSK 701
+ DV+S G+++ +L+ +
Sbjct: 185 AEPVDVWSCGIVLTAMLAGE 204
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 87/200 (43%), Gaps = 22/200 (11%)
Query: 524 TENFSIQSKLGEGGFGPVYKG-RLLNGQEVAVKRLSNQSGQGLKE-FKNEMMLIAKLQHR 581
E++ + LGEG +G V + + VAVK + + E K E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 582 NLVRLLGCCIEQGEKILIYEYMVNKSL------DVFLFDPTKK-------------HLLG 622
N+V+ G E + L EY L D+ + +P + H +G
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 623 WQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFS 682
R + + D+ N KISDFG+A +F + + ++ GT Y++PE F
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 683 VKS-DVFSFGVLMLEILSSK 701
+ DV+S G+++ +L+ +
Sbjct: 185 AEPVDVWSCGIVLTAMLAGE 204
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 92/207 (44%), Gaps = 21/207 (10%)
Query: 514 LFSFASVTAATENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFKNEM 572
L S SV + ++ K+G+G G VY + GQEVA+++++ Q + NE+
Sbjct: 9 LRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEI 68
Query: 573 MLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDP----------------T 616
+++ + ++ N+V L + E ++ EY+ SL + +
Sbjct: 69 LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQA 128
Query: 617 KKHLLGWQLRVRII--DGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPE 674
+ L Q+ R I D I + K++DFG + Q +VGT +M+PE
Sbjct: 129 LEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE--QSKRSEMVGTPYWMAPE 186
Query: 675 YALEGVFSVKSDVFSFGVLMLEILSSK 701
+ K D++S G++ +E++ +
Sbjct: 187 VVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 87/200 (43%), Gaps = 22/200 (11%)
Query: 524 TENFSIQSKLGEGGFGPVYKG-RLLNGQEVAVKRLSNQSGQGLKE-FKNEMMLIAKLQHR 581
E++ + LGEG +G V + + VAVK + + E K E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 582 NLVRLLGCCIEQGEKILIYEYMVNKSL------DVFLFDPTKK-------------HLLG 622
N+V+ G E + L EY L D+ + +P + H +G
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 623 WQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFS 682
R + + D+ N KISDFG+A +F + + ++ GT Y++PE F
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 683 VKS-DVFSFGVLMLEILSSK 701
+ DV+S G+++ +L+ +
Sbjct: 185 AEPVDVWSCGIVLTAMLAGE 204
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 87/200 (43%), Gaps = 22/200 (11%)
Query: 524 TENFSIQSKLGEGGFGPVYKG-RLLNGQEVAVKRLSNQSGQGLKE-FKNEMMLIAKLQHR 581
E++ + LGEG +G V + + VAVK + + E K E+ + L H
Sbjct: 4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 63
Query: 582 NLVRLLGCCIEQGEKILIYEYMVNKSL------DVFLFDPTKK-------------HLLG 622
N+V+ G E + L EY L D+ + +P + H +G
Sbjct: 64 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 123
Query: 623 WQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFS 682
R + + D+ N KISDFG+A +F + + ++ GT Y++PE F
Sbjct: 124 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 183
Query: 683 VKS-DVFSFGVLMLEILSSK 701
+ DV+S G+++ +L+ +
Sbjct: 184 AEPVDVWSCGIVLTAMLAGE 203
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 87/200 (43%), Gaps = 22/200 (11%)
Query: 524 TENFSIQSKLGEGGFGPVYKG-RLLNGQEVAVKRLSNQSGQGLKE-FKNEMMLIAKLQHR 581
E++ + LGEG +G V + + VAVK + + E K E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 582 NLVRLLGCCIEQGEKILIYEYMVNKSL------DVFLFDPTKK-------------HLLG 622
N+V+ G E + L EY L D+ + +P + H +G
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 623 WQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFS 682
R + + D+ N KISDFG+A +F + + ++ GT Y++PE F
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 683 VKS-DVFSFGVLMLEILSSK 701
+ DV+S G+++ +L+ +
Sbjct: 185 AEPVDVWSCGIVLTAMLAGE 204
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 87/200 (43%), Gaps = 22/200 (11%)
Query: 524 TENFSIQSKLGEGGFGPVYKG-RLLNGQEVAVKRLSNQSGQGLKE-FKNEMMLIAKLQHR 581
E++ + LGEG +G V + + VAVK + + E K E+ + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 582 NLVRLLGCCIEQGEKILIYEYMVNKSL------DVFLFDPTKK-------------HLLG 622
N+V+ G E + L EY L D+ + +P + H +G
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 623 WQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFS 682
R + + D+ N KISDFG+A +F + + ++ GT Y++PE F
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 683 VKS-DVFSFGVLMLEILSSK 701
+ DV+S G+++ +L+ +
Sbjct: 186 AEPVDVWSCGIVLTAMLAGE 205
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 87/200 (43%), Gaps = 22/200 (11%)
Query: 524 TENFSIQSKLGEGGFGPVYKG-RLLNGQEVAVKRLSNQSGQGLKE-FKNEMMLIAKLQHR 581
E++ + LGEG +G V + + VAVK + + E K E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 582 NLVRLLGCCIEQGEKILIYEYMVNKSL------DVFLFDPTKK-------------HLLG 622
N+V+ G E + L EY L D+ + +P + H +G
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 623 WQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFS 682
R + + D+ N KISDFG+A +F + + ++ GT Y++PE F
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 683 VKS-DVFSFGVLMLEILSSK 701
+ DV+S G+++ +L+ +
Sbjct: 185 AEPVDVWSCGIVLTAMLAGE 204
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 95/207 (45%), Gaps = 21/207 (10%)
Query: 514 LFSFASVTAATENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFKNEM 572
L S SV + ++ K+G+G G VY + GQEVA+++++ Q + NE+
Sbjct: 9 LRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEI 68
Query: 573 MLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDP----------------T 616
+++ + ++ N+V L + E ++ EY+ SL + +
Sbjct: 69 LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQA 128
Query: 617 KKHLLGWQLRVRII--DGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPE 674
+ L Q+ R I D I + K++DFG ++ + +T +VGT +M+PE
Sbjct: 129 LEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST--MVGTPYWMAPE 186
Query: 675 YALEGVFSVKSDVFSFGVLMLEILSSK 701
+ K D++S G++ +E++ +
Sbjct: 187 VVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 99/202 (49%), Gaps = 34/202 (16%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLS-NQSGQGLKEFK-NEMMLIAKLQHRN 582
E + K+GEG +G VYK + G+ A+K++ + +G+ E+ ++ +L+H N
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 583 LVRLLGCCIEQGEKILIYEYM---VNKSLDVF---LFDPTKKHLLGWQLRVRIIDGIAQ- 635
+V+L + +L++E++ + K LDV L T K L +++++GIA
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFL-----LQLLNGIAYC 116
Query: 636 ------DQHMNP-----------KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYAL- 677
+ + P KI+DFG+AR F G ++ T IV T Y +P+ +
Sbjct: 117 HDRRVLHRDLKPQNLLINREGELKIADFGLARAF-GIPVRKYTHEIV-TLWYRAPDVLMG 174
Query: 678 EGVFSVKSDVFSFGVLMLEILS 699
+S D++S G + E+++
Sbjct: 175 SKKYSTTIDIWSVGCIFAEMVN 196
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 95/220 (43%), Gaps = 47/220 (21%)
Query: 525 ENFSIQSKLGEGGFGPVYKG------RLLNGQEVAVKRLSNQSGQGLKEFKNEM----ML 574
+ ++ LG G FG V + + + VAVK L + G E + M +L
Sbjct: 28 DRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKML--KEGATHSEHRALMSELKIL 85
Query: 575 IAKLQHRNLVRLLGCCIEQGEKIL-IYEYMVNKSLDVFL------FDPTK---------- 617
I H N+V LLG C + G ++ I E+ +L +L F P K
Sbjct: 86 IHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFL 145
Query: 618 --KHLLGWQLRV-RIIDGIAQDQHMNP---------------KISDFGMARMFGGDELQG 659
+HL+ + +V + ++ +A + ++ KI DFG+AR D
Sbjct: 146 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXV 205
Query: 660 NTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS 699
+M+PE + V++++SDV+SFGVL+ EI S
Sbjct: 206 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 124/304 (40%), Gaps = 42/304 (13%)
Query: 531 SKLGEGGFGPVYKGRLL-----NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVR 585
S+LG+G FG V R G VAVK+L + ++F+ E+ ++ L +V+
Sbjct: 17 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 76
Query: 586 LLGCCIEQGEKIL--IYEYMVNKSLDVFL------FDPTKKHLLGWQL------------ 625
G G + L + EY+ + L FL D ++ L Q+
Sbjct: 77 YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRC 136
Query: 626 --RVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYG-----YMSPEYALE 678
R I + + KI+DFG+A++ D+ +V G + +PE +
Sbjct: 137 VHRDLAARNILVESEAHVKIADFGLAKLLPLDK----DYYVVREPGQSPIFWYAPESLSD 192
Query: 679 GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLG---HAWSLCKNDRAHELMDPVL 735
+FS +SDV+SFGV++ E+ + + + + ++G +LC+ L
Sbjct: 193 NIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALCRLLEL-LEEGQRL 251
Query: 736 QNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNELFNLPSPKEPPFTTFTKGKN 795
+ P V + LC + +DRP+ S + ++ + FT +GK+
Sbjct: 252 PAPPACPAEVH--ELMKLCWAPSPQDRPSFSALGPQLDMLWSGSRGCETHAFTAHPEGKH 309
Query: 796 MKYS 799
S
Sbjct: 310 HSLS 313
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 87/200 (43%), Gaps = 22/200 (11%)
Query: 524 TENFSIQSKLGEGGFGPVYKG-RLLNGQEVAVKRLSNQSGQGLKE-FKNEMMLIAKLQHR 581
E++ + LGEG +G V + + VAVK + + E K E+ + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 582 NLVRLLGCCIEQGEKILIYEYMVNKSL------DVFLFDPTKK-------------HLLG 622
N+V+ G E + L EY L D+ + +P + H +G
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 623 WQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFS 682
R + + D+ N KISDFG+A +F + + ++ GT Y++PE F
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 683 VKS-DVFSFGVLMLEILSSK 701
+ DV+S G+++ +L+ +
Sbjct: 186 AEPVDVWSCGIVLTAMLAGE 205
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 87/200 (43%), Gaps = 22/200 (11%)
Query: 524 TENFSIQSKLGEGGFGPVYKG-RLLNGQEVAVKRLSNQSGQGLKE-FKNEMMLIAKLQHR 581
E++ + LGEG +G V + + VAVK + + E K E+ + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 582 NLVRLLGCCIEQGEKILIYEYMVNKSL------DVFLFDPTKK-------------HLLG 622
N+V+ G E + L EY L D+ + +P + H +G
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 623 WQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFS 682
R + + D+ N KISDFG+A +F + + ++ GT Y++PE F
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 683 VKS-DVFSFGVLMLEILSSK 701
+ DV+S G+++ +L+ +
Sbjct: 186 AEPVDVWSCGIVLTAMLAGE 205
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 87/200 (43%), Gaps = 22/200 (11%)
Query: 524 TENFSIQSKLGEGGFGPVYKG-RLLNGQEVAVKRLSNQSGQGLKE-FKNEMMLIAKLQHR 581
E++ + LGEG +G V + + VAVK + + E K E+ + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 582 NLVRLLGCCIEQGEKILIYEYMVNKSL------DVFLFDPTKK-------------HLLG 622
N+V+ G E + L EY L D+ + +P + H +G
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 623 WQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFS 682
R + + D+ N KISDFG+A +F + + ++ GT Y++PE F
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 683 VKS-DVFSFGVLMLEILSSK 701
+ DV+S G+++ +L+ +
Sbjct: 186 AEPVDVWSCGIVLTAMLAGE 205
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 99/210 (47%), Gaps = 27/210 (12%)
Query: 533 LGEGGFGPVYKGRLLNGQE-----VAVKRL-SNQSGQGLKEFKNEMMLIAKLQHRNLVRL 586
LG G FG VYKG + E VA+K L N S + KE +E ++A + + RL
Sbjct: 25 LGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRL 84
Query: 587 LGCCIEQGEKILIYEYMVNKSLDVFLFDPTK---KHLLGWQLR----------VRII--D 631
LG C+ +++ LD + + + LL W ++ VR++ D
Sbjct: 85 LGICLTSTVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYLEDVRLVHRD 144
Query: 632 GIAQDQHMNP----KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDV 687
A++ + KI+DFG+AR+ DE + + +M+ E L F+ +SDV
Sbjct: 145 LAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILRRRFTHQSDV 204
Query: 688 FSFGVLMLEILS--SKKNTGVYNTDSFNLL 715
+S+GV + E+++ +K G+ + +LL
Sbjct: 205 WSYGVTVWELMTFGAKPYDGIPAREIPDLL 234
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 87/200 (43%), Gaps = 22/200 (11%)
Query: 524 TENFSIQSKLGEGGFGPVYKG-RLLNGQEVAVKRLSNQSGQGLKE-FKNEMMLIAKLQHR 581
E++ + LGEG +G V + + VAVK + + E K E+ + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 582 NLVRLLGCCIEQGEKILIYEYMVNKSL------DVFLFDPTKK-------------HLLG 622
N+V+ G E + L EY L D+ + +P + H +G
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 623 WQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFS 682
R + + D+ N KISDFG+A +F + + ++ GT Y++PE F
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 683 VKS-DVFSFGVLMLEILSSK 701
+ DV+S G+++ +L+ +
Sbjct: 186 AEPVDVWSCGIVLTAMLAGE 205
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 87/200 (43%), Gaps = 22/200 (11%)
Query: 524 TENFSIQSKLGEGGFGPVYKG-RLLNGQEVAVKRLSNQSGQGLKE-FKNEMMLIAKLQHR 581
E++ + LGEG +G V + + VAVK + + E K E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 582 NLVRLLGCCIEQGEKILIYEYMVNKSL------DVFLFDPTKK-------------HLLG 622
N+V+ G E + L EY L D+ + +P + H +G
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 623 WQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFS 682
R + + D+ N KISDFG+A +F + + ++ GT Y++PE F
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 683 VKS-DVFSFGVLMLEILSSK 701
+ DV+S G+++ +L+ +
Sbjct: 185 AEPVDVWSCGIVLTAMLAGE 204
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 87/200 (43%), Gaps = 22/200 (11%)
Query: 524 TENFSIQSKLGEGGFGPVYKG-RLLNGQEVAVKRLSNQSGQGLKE-FKNEMMLIAKLQHR 581
E++ + LGEG +G V + + VAVK + + E K E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 582 NLVRLLGCCIEQGEKILIYEYMVNKSL------DVFLFDPTKK-------------HLLG 622
N+V+ G E + L EY L D+ + +P + H +G
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 623 WQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFS 682
R + + D+ N KISDFG+A +F + + ++ GT Y++PE F
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 683 VKS-DVFSFGVLMLEILSSK 701
+ DV+S G+++ +L+ +
Sbjct: 185 AEPVDVWSCGIVLTAMLAGE 204
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 93/198 (46%), Gaps = 37/198 (18%)
Query: 533 LGEGGFGPVYKGRLLNGQE-----VAVKRLSNQSG-QGLKEFKNEMMLIAKLQHRNLVRL 586
LG G FG V+KG + E V +K + ++SG Q + + M+ I L H ++VRL
Sbjct: 39 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 98
Query: 587 LGCCIEQGEKI-LIYEYMVNKSLDVFLFDPTKKH--LLGWQLR----VRIIDGIAQDQ-- 637
LG C G + L+ +Y+ S L D ++H LG QL V+I G+ +
Sbjct: 99 LGLC--PGSSLQLVTQYLPLGS----LLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEH 152
Query: 638 ---HMN-------------PKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVF 681
H N +++DFG+A + D+ Q +M+ E G +
Sbjct: 153 GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKY 212
Query: 682 SVKSDVFSFGVLMLEILS 699
+ +SDV+S+GV + E+++
Sbjct: 213 THQSDVWSYGVTVWELMT 230
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 87/200 (43%), Gaps = 22/200 (11%)
Query: 524 TENFSIQSKLGEGGFGPVYKG-RLLNGQEVAVKRLSNQSGQGLKE-FKNEMMLIAKLQHR 581
E++ + LGEG +G V + + VAVK + + E K E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 582 NLVRLLGCCIEQGEKILIYEYMVNKSL------DVFLFDPTKK-------------HLLG 622
N+V+ G E + L EY L D+ + +P + H +G
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 623 WQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFS 682
R + + D+ N KISDFG+A +F + + ++ GT Y++PE F
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 683 VKS-DVFSFGVLMLEILSSK 701
+ DV+S G+++ +L+ +
Sbjct: 185 AEPVDVWSCGIVLTAMLAGE 204
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/301 (21%), Positives = 114/301 (37%), Gaps = 70/301 (23%)
Query: 527 FSIQSKLGEGGFGPVYKGRLLN------GQEVAVKRLSNQSGQGLKE-FKNEMMLIAKL- 578
S LG G FG V + VAVK L + +E +E+ +++ L
Sbjct: 48 LSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLG 107
Query: 579 QHRNLVRLLGCCIEQGEKILIYEY--------MVNKSLDVFLFDPTKKHLLGW------- 623
H N+V LLG C G ++I EY + + D F+ T ++
Sbjct: 108 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 167
Query: 624 ----QLRVRIIDGIAQDQHMN------------------PKISDFGMARMFGGDE---LQ 658
++ G+A N KI DFG+AR D ++
Sbjct: 168 EDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVK 227
Query: 659 GNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS--SKKNTGV-YNTDSFNLL 715
GN + V +M+PE V++ +SDV+S+G+ + E+ S S G+ ++ + ++
Sbjct: 228 GNARLPVK---WMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMI 284
Query: 716 GHAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775
+ + + A M +++ C + RPT +V +I +
Sbjct: 285 KEGFRMLSPEHAPAEMYDIMKT----------------CWDADPLKRPTFKQIVQLIEKQ 328
Query: 776 L 776
+
Sbjct: 329 I 329
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 87/200 (43%), Gaps = 22/200 (11%)
Query: 524 TENFSIQSKLGEGGFGPVYKG-RLLNGQEVAVKRLSNQSGQGLKE-FKNEMMLIAKLQHR 581
E++ + LGEG +G V + + VAVK + + E K E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 582 NLVRLLGCCIEQGEKILIYEYMVNKSL------DVFLFDPTKK-------------HLLG 622
N+V+ G E + L EY L D+ + +P + H +G
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 623 WQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFS 682
R + + D+ N KISDFG+A +F + + ++ GT Y++PE F
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 683 VKS-DVFSFGVLMLEILSSK 701
+ DV+S G+++ +L+ +
Sbjct: 185 AEPVDVWSCGIVLTAMLAGE 204
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 87/200 (43%), Gaps = 22/200 (11%)
Query: 524 TENFSIQSKLGEGGFGPVYKG-RLLNGQEVAVKRLSNQSGQGLKE-FKNEMMLIAKLQHR 581
E++ + LGEG +G V + + VAVK + + E K E+ + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 65
Query: 582 NLVRLLGCCIEQGEKILIYEYMVNKSL------DVFLFDPTKK-------------HLLG 622
N+V+ G E + L EY L D+ + +P + H +G
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 623 WQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFS 682
R + + D+ N KISDFG+A +F + + ++ GT Y++PE F
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 185
Query: 683 VKS-DVFSFGVLMLEILSSK 701
+ DV+S G+++ +L+ +
Sbjct: 186 AEPVDVWSCGIVLTAMLAGE 205
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 87/200 (43%), Gaps = 22/200 (11%)
Query: 524 TENFSIQSKLGEGGFGPVYKG-RLLNGQEVAVKRLSNQSGQGLKE-FKNEMMLIAKLQHR 581
E++ + LGEG +G V + + VAVK + + E K E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 582 NLVRLLGCCIEQGEKILIYEYMVNKSL------DVFLFDPTKK-------------HLLG 622
N+V+ G E + L EY L D+ + +P + H +G
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 623 WQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFS 682
R + + D+ N KISDFG+A +F + + ++ GT Y++PE F
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 683 VKS-DVFSFGVLMLEILSSK 701
+ DV+S G+++ +L+ +
Sbjct: 185 AEPVDVWSCGIVLTAMLAGE 204
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 92/207 (44%), Gaps = 21/207 (10%)
Query: 514 LFSFASVTAATENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFKNEM 572
L S SV + ++ K+G+G G VY + GQEVA+++++ Q + NE+
Sbjct: 9 LRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEI 68
Query: 573 MLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDP----------------T 616
+++ + ++ N+V L + E ++ EY+ SL + +
Sbjct: 69 LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQA 128
Query: 617 KKHLLGWQLRVRII--DGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPE 674
+ L Q+ R I D I + K++DFG + Q +VGT +M+PE
Sbjct: 129 LEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE--QSKRSXMVGTPYWMAPE 186
Query: 675 YALEGVFSVKSDVFSFGVLMLEILSSK 701
+ K D++S G++ +E++ +
Sbjct: 187 VVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 91/212 (42%), Gaps = 41/212 (19%)
Query: 522 AATENFSIQSKLGEGGFGPVYK------GRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLI 575
+ E++ + +G G +G K G++L +E+ ++ Q L +E+ L+
Sbjct: 3 SRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLV---SEVNLL 59
Query: 576 AKLQHRNLVRLLGCCIEQGEKIL--IYEYMVNKSLDVFLFDPTK-KHLLGWQLRVRII-- 630
+L+H N+VR I++ L + EY L + TK + L + +R++
Sbjct: 60 RELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQ 119
Query: 631 ------------DG-------------IAQDQHMNPKISDFGMARMFGGDELQGNTKRIV 665
DG + D N K+ DFG+AR+ DE K V
Sbjct: 120 LTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDE--DFAKEFV 177
Query: 666 GTYGYMSPEYALEGVFSVKSDVFSFGVLMLEI 697
GT YMSPE ++ KSD++S G L+ E+
Sbjct: 178 GTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 99/202 (49%), Gaps = 34/202 (16%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLS-NQSGQGLKEFK-NEMMLIAKLQHRN 582
E + K+GEG +G VYK + G+ A+K++ + +G+ E+ ++ +L+H N
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 583 LVRLLGCCIEQGEKILIYEYM---VNKSLDVF---LFDPTKKHLLGWQLRVRIIDGIAQ- 635
+V+L + +L++E++ + K LDV L T K L +++++GIA
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFL-----LQLLNGIAYC 116
Query: 636 ------DQHMNP-----------KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYAL- 677
+ + P KI+DFG+AR F G ++ T +V T Y +P+ +
Sbjct: 117 HDRRVLHRDLKPQNLLINREGELKIADFGLARAF-GIPVRKYTHEVV-TLWYRAPDVLMG 174
Query: 678 EGVFSVKSDVFSFGVLMLEILS 699
+S D++S G + E+++
Sbjct: 175 SKKYSTTIDIWSVGCIFAEMVN 196
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 93/198 (46%), Gaps = 37/198 (18%)
Query: 533 LGEGGFGPVYKGRLLNGQE-----VAVKRLSNQSG-QGLKEFKNEMMLIAKLQHRNLVRL 586
LG G FG V+KG + E V +K + ++SG Q + + M+ I L H ++VRL
Sbjct: 21 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 80
Query: 587 LGCCIEQGEKI-LIYEYMVNKSLDVFLFDPTKKH--LLGWQLR----VRIIDGIAQDQ-- 637
LG C G + L+ +Y+ S L D ++H LG QL V+I G+ +
Sbjct: 81 LGLC--PGSSLQLVTQYLPLGS----LLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEH 134
Query: 638 ---HMN-------------PKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVF 681
H N +++DFG+A + D+ Q +M+ E G +
Sbjct: 135 GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKY 194
Query: 682 SVKSDVFSFGVLMLEILS 699
+ +SDV+S+GV + E+++
Sbjct: 195 THQSDVWSYGVTVWELMT 212
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 92/207 (44%), Gaps = 21/207 (10%)
Query: 514 LFSFASVTAATENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFKNEM 572
L S SV + ++ K+G+G G VY + GQEVA+++++ Q + NE+
Sbjct: 10 LRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEI 69
Query: 573 MLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDP----------------T 616
+++ + ++ N+V L + E ++ EY+ SL + +
Sbjct: 70 LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQA 129
Query: 617 KKHLLGWQLRVRII--DGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPE 674
+ L Q+ R I D I + K++DFG + Q +VGT +M+PE
Sbjct: 130 LEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE--QSKRSXMVGTPYWMAPE 187
Query: 675 YALEGVFSVKSDVFSFGVLMLEILSSK 701
+ K D++S G++ +E++ +
Sbjct: 188 VVTRKAYGPKVDIWSLGIMAIEMIEGE 214
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 99/202 (49%), Gaps = 34/202 (16%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLS-NQSGQGLKEFK-NEMMLIAKLQHRN 582
E + K+GEG +G VYK + G+ A+K++ + +G+ E+ ++ +L+H N
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 583 LVRLLGCCIEQGEKILIYEYM---VNKSLDVF---LFDPTKKHLLGWQLRVRIIDGIAQ- 635
+V+L + +L++E++ + K LDV L T K L +++++GIA
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFL-----LQLLNGIAYC 116
Query: 636 ------DQHMNP-----------KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYAL- 677
+ + P KI+DFG+AR F G ++ T +V T Y +P+ +
Sbjct: 117 HDRRVLHRDLKPQNLLINREGELKIADFGLARAF-GIPVRKYTHEVV-TLWYRAPDVLMG 174
Query: 678 EGVFSVKSDVFSFGVLMLEILS 699
+S D++S G + E+++
Sbjct: 175 SKKYSTTIDIWSVGCIFAEMVN 196
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 87/200 (43%), Gaps = 22/200 (11%)
Query: 524 TENFSIQSKLGEGGFGPVYKG-RLLNGQEVAVKRLSNQSGQGLKE-FKNEMMLIAKLQHR 581
E++ + LGEG +G V + + VAVK + + E K E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 582 NLVRLLGCCIEQGEKILIYEYMVNKSL------DVFLFDPTKK-------------HLLG 622
N+V+ G E + L EY L D+ + +P + H +G
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 623 WQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFS 682
R + + D+ N KISDFG+A +F + + ++ GT Y++PE F
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 683 VKS-DVFSFGVLMLEILSSK 701
+ DV+S G+++ +L+ +
Sbjct: 185 AEPVDVWSCGIVLTAMLAGE 204
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 98/227 (43%), Gaps = 41/227 (18%)
Query: 531 SKLGEGGFGPVYKGRLL-----NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVR 585
S+LG+G FG V R G VAVK+L + ++F+ E+ ++ L +V+
Sbjct: 29 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 88
Query: 586 LLGCCIEQGEKIL--IYEYMVNKSLDVFL------FDPTKKHLLGWQL------------ 625
G G + L + EY+ + L FL D ++ L Q+
Sbjct: 89 YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRC 148
Query: 626 --RVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYG-----YMSPEYALE 678
R I + + KI+DFG+A++ D+ +V G + +PE +
Sbjct: 149 VHRDLAARNILVESEAHVKIADFGLAKLLPLDK----DYYVVREPGQSPIFWYAPESLSD 204
Query: 679 GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKND 725
+FS +SDV+SFGV++ E+ + + + + ++G C+ D
Sbjct: 205 NIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMG-----CERD 246
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 95/218 (43%), Gaps = 36/218 (16%)
Query: 531 SKLGEGGFGPVYKGRLL-----NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVR 585
S+LG+G FG V R G VAVK+L + ++F+ E+ ++ L +V+
Sbjct: 16 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 75
Query: 586 LLGCCIEQGEKIL--IYEYMVNKSLDVFL------FDPTKKHLLGWQL------------ 625
G G + L + EY+ + L FL D ++ L Q+
Sbjct: 76 YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRC 135
Query: 626 --RVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYG-----YMSPEYALE 678
R I + + KI+DFG+A++ D+ +V G + +PE +
Sbjct: 136 VHRDLAARNILVESEAHVKIADFGLAKLLPLDK----DYYVVREPGQSPIFWYAPESLSD 191
Query: 679 GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLG 716
+FS +SDV+SFGV++ E+ + + + + ++G
Sbjct: 192 NIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMG 229
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 125/294 (42%), Gaps = 64/294 (21%)
Query: 524 TENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQG--LKEFKNEMMLIAKLQH 580
E ++I LG+G FG V K + + QE AVK ++ S + E+ L+ KL H
Sbjct: 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH 80
Query: 581 RNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPT-KKHLLGWQLRVRIIDGI------ 633
N+++L + ++ E L FD K+ RII +
Sbjct: 81 PNIMKLFEILEDSSSFYIVGELYTGGEL----FDEIIKRKRFSEHDAARIIKQVFSGITY 136
Query: 634 -------------------AQDQHMNPKISDFGMARMFGGDELQGNTKRI--VGTYGYMS 672
++++ + KI DFG++ F Q NTK +GT Y++
Sbjct: 137 MHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF-----QQNTKMKDRIGTAYYIA 191
Query: 673 PEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLL------GHAWSLCK--- 723
PE L G + K DV+S GV++ +LS Y + +++L +A+ L +
Sbjct: 192 PE-VLRGTYDEKCDVWSAGVILYILLSG--TPPFYGKNEYDILKRVETGKYAFDLPQWRT 248
Query: 724 -NDRAHELMDPVLQNEVSLPMLVRYINVALLC-----VQENAEDRPTMSDVVSM 771
+D A +L+ +L SL + A C +Q+ + + PT+SD+ S+
Sbjct: 249 ISDDAKDLIRKMLTFHPSLRI------TATQCLEHPWIQKYSSETPTISDLPSL 296
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 94/221 (42%), Gaps = 48/221 (21%)
Query: 525 ENFSIQSKLGEGGFGPVYKG------RLLNGQEVAVKRLSNQSGQGLKEFKNEM----ML 574
+ + LG G FG V + + + VAVK L + G E + M +L
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKML--KEGATHSEHRALMSELKIL 84
Query: 575 IAKLQHRNLVRLLGCCIEQGEKIL-IYEYMVNKSLDVFL------FDPTK---------- 617
I H N+V LLG C + G ++ I E+ +L +L F P K
Sbjct: 85 IHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF 144
Query: 618 ---KHLLGWQLRV-RIIDGIAQDQHMNP---------------KISDFGMARMFGGDELQ 658
+HL+ + +V + ++ +A + ++ KI DFG+AR D
Sbjct: 145 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDX 204
Query: 659 GNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS 699
+M+PE + V++++SDV+SFGVL+ EI S
Sbjct: 205 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 121/300 (40%), Gaps = 65/300 (21%)
Query: 525 ENFSIQSKLGEGGFGPVYKG------RLLNGQEVAVKRLSNQSGQGLKEFKNEM----ML 574
+ + LG G FG V + + + VAVK L + G E + M +L
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKML--KEGATHSEHRALMSELKIL 75
Query: 575 IAKLQHRNLVRLLGCCIEQGEKIL-IYEYMVNKSLDVFL------FDPTK---------- 617
I H N+V LLG C + G ++ I E+ +L +L F P K
Sbjct: 76 IHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF 135
Query: 618 ---KHLLGWQLRV-RIIDGIAQDQHMNP---------------KISDFGMARMFGGDELQ 658
+HL+ + +V + ++ +A + ++ KI DFG+AR D
Sbjct: 136 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDX 195
Query: 659 GNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS--SKKNTGVYNTDSFNLLG 716
+M+PE + V++++SDV+SFGVL+ EI S + GV + F
Sbjct: 196 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF---- 251
Query: 717 HAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNEL 776
C+ + M + + P + + + L C RPT S++V + N L
Sbjct: 252 -----CRRLKEGTRMR---APDYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHLGNLL 300
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/301 (21%), Positives = 114/301 (37%), Gaps = 70/301 (23%)
Query: 527 FSIQSKLGEGGFGPVYKGRLLN------GQEVAVKRLSNQSGQGLKE-FKNEMMLIAKL- 578
S LG G FG V + VAVK L + +E +E+ +++ L
Sbjct: 48 LSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLG 107
Query: 579 QHRNLVRLLGCCIEQGEKILIYEY--------MVNKSLDVFLFDPTKKHLLGW------- 623
H N+V LLG C G ++I EY + + D F+ T ++
Sbjct: 108 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 167
Query: 624 ----QLRVRIIDGIAQDQHMN------------------PKISDFGMARMFGGDE---LQ 658
++ G+A N KI DFG+AR D ++
Sbjct: 168 EDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 227
Query: 659 GNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS--SKKNTGV-YNTDSFNLL 715
GN + V +M+PE V++ +SDV+S+G+ + E+ S S G+ ++ + ++
Sbjct: 228 GNARLPVK---WMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMI 284
Query: 716 GHAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775
+ + + A M +++ C + RPT +V +I +
Sbjct: 285 KEGFRMLSPEHAPAEMYDIMKT----------------CWDADPLKRPTFKQIVQLIEKQ 328
Query: 776 L 776
+
Sbjct: 329 I 329
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 121/300 (40%), Gaps = 65/300 (21%)
Query: 525 ENFSIQSKLGEGGFGPVYKG------RLLNGQEVAVKRLSNQSGQGLKEFKNEM----ML 574
+ + LG G FG V + + + VAVK L + G E + M +L
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKML--KEGATHSEHRALMSELKIL 75
Query: 575 IAKLQHRNLVRLLGCCIEQGEKIL-IYEYMVNKSLDVFL------FDPTK---------- 617
I H N+V LLG C + G ++ I E+ +L +L F P K
Sbjct: 76 IHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF 135
Query: 618 ---KHLLGWQLRV-RIIDGIAQDQHMNP---------------KISDFGMARMFGGDELQ 658
+HL+ + +V + ++ +A + ++ KI DFG+AR D
Sbjct: 136 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDX 195
Query: 659 GNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS--SKKNTGVYNTDSFNLLG 716
+M+PE + V++++SDV+SFGVL+ EI S + GV + F
Sbjct: 196 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF---- 251
Query: 717 HAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNEL 776
C+ + M + + P + + + L C RPT S++V + N L
Sbjct: 252 -----CRRLKEGTRMR---APDYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHLGNLL 300
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 98/223 (43%), Gaps = 52/223 (23%)
Query: 525 ENFSIQSKLGEGGFGPVYKG------RLLNGQEVAVKRLSNQSGQGLKEFKNEM----ML 574
+ + LG G FG V + + + VAVK L + G E + M +L
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKML--KEGATHSEHRALMSELKIL 84
Query: 575 IAKLQHRNLVRLLGCCIEQGEKIL-IYEYMVNKSLDVFL------FDPTK---------- 617
I H N+V LLG C + G ++ I E+ +L +L F P K
Sbjct: 85 IHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF 144
Query: 618 ---KHLLGWQLRV-RIIDGIAQDQHMNP---------------KISDFGMARMF--GGDE 656
+HL+ + +V + ++ +A + ++ KI DFG+AR D
Sbjct: 145 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDX 204
Query: 657 LQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS 699
++ R+ +M+PE + V++++SDV+SFGVL+ EI S
Sbjct: 205 VRKGDARL--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 92/208 (44%), Gaps = 38/208 (18%)
Query: 521 TAATENFSIQSKLGEGGFGPVYKG-RLLNGQEVAVKRLSNQ--SGQGLKEFKNEMMLIAK 577
T ++N+ ++ +LG+G F V + G E A K ++ + S + ++ + E + K
Sbjct: 1 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRK 60
Query: 578 LQHRNLVRLLGCCIEQGEKILIYEYMVNKSL--DV----FLFDPTKKHLLGWQLRVRIID 631
LQH N+VRL E+ L+++ + L D+ F + H + +I++
Sbjct: 61 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ-----QILE 115
Query: 632 GIAQ-------DQHMNP--------------KISDFGMARMFGGDELQGNTKRIVGTYGY 670
IA +++ P K++DFG+A E GT GY
Sbjct: 116 SIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHG---FAGTPGY 172
Query: 671 MSPEYALEGVFSVKSDVFSFGVLMLEIL 698
+SPE + +S D+++ GV++ +L
Sbjct: 173 LSPEVLKKDPYSKPVDIWACGVILYILL 200
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 64/301 (21%), Positives = 114/301 (37%), Gaps = 70/301 (23%)
Query: 527 FSIQSKLGEGGFGPVYKGRLLN------GQEVAVKRLSNQSGQGLKE-FKNEMMLIAKL- 578
S LG G FG V + VAVK L + +E +E+ +++ L
Sbjct: 25 LSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLG 84
Query: 579 QHRNLVRLLGCCIEQGEKILIYEY--------MVNKSLDVFLFDPTKKHLLGW------- 623
H N+V LLG C G ++I EY + + D F+ T ++
Sbjct: 85 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 144
Query: 624 ----QLRVRIIDGIAQDQHMN------------------PKISDFGMARMFGGDE---LQ 658
++ G+A N KI DFG+AR D ++
Sbjct: 145 EDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 204
Query: 659 GNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS--SKKNTGV-YNTDSFNLL 715
GN + V +M+PE V++ +SDV+S+G+ + E+ S S G+ ++ + ++
Sbjct: 205 GNARLPVK---WMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMI 261
Query: 716 GHAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775
+ + + A M +++ C + RPT +V +I +
Sbjct: 262 KEGFRMLSPEHAPAEMYDIMKT----------------CWDADPLKRPTFKQIVQLIEKQ 305
Query: 776 L 776
+
Sbjct: 306 I 306
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 98/211 (46%), Gaps = 36/211 (17%)
Query: 523 ATENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQ-GLK-EFKNEMMLIAKLQ 579
AT + +++G G +G VYK R +G VA+K + +G+ GL E+ L+ +L+
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 580 ---HRNLVRLLGCCI-----EQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLR----- 626
H N+VRL+ C + + L++E+ V++ L +L L ++
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEH-VDQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 627 -VRIIDGIAQD----QHMNP-----------KISDFGMARMFGGDELQGNTKRIVGTYGY 670
+R +D + + + + P K++DFG+AR++ Q +V T Y
Sbjct: 121 FLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYS---YQMALAPVVVTLWY 177
Query: 671 MSPEYALEGVFSVKSDVFSFGVLMLEILSSK 701
+PE L+ ++ D++S G + E+ K
Sbjct: 178 RAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 64/301 (21%), Positives = 114/301 (37%), Gaps = 70/301 (23%)
Query: 527 FSIQSKLGEGGFGPVYKGRLLN------GQEVAVKRLSNQSGQGLKE-FKNEMMLIAKL- 578
S LG G FG V + VAVK L + +E +E+ +++ L
Sbjct: 41 LSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLG 100
Query: 579 QHRNLVRLLGCCIEQGEKILIYEY--------MVNKSLDVFLFDPTKKHLLGW------- 623
H N+V LLG C G ++I EY + + D F+ T ++
Sbjct: 101 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 160
Query: 624 ----QLRVRIIDGIAQDQHMN------------------PKISDFGMARMFGGDE---LQ 658
++ G+A N KI DFG+AR D ++
Sbjct: 161 EDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 220
Query: 659 GNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS--SKKNTGV-YNTDSFNLL 715
GN + V +M+PE V++ +SDV+S+G+ + E+ S S G+ ++ + ++
Sbjct: 221 GNARLPVK---WMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMI 277
Query: 716 GHAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775
+ + + A M +++ C + RPT +V +I +
Sbjct: 278 KEGFRMLSPEHAPAEMYDIMKT----------------CWDADPLKRPTFKQIVQLIEKQ 321
Query: 776 L 776
+
Sbjct: 322 I 322
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 92/208 (44%), Gaps = 38/208 (18%)
Query: 521 TAATENFSIQSKLGEGGFGPVYKG-RLLNGQEVAVKRLSNQ--SGQGLKEFKNEMMLIAK 577
T ++N+ ++ +LG+G F V + G E A K ++ + S + ++ + E + K
Sbjct: 2 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRK 61
Query: 578 LQHRNLVRLLGCCIEQGEKILIYEYMVNKSL--DV----FLFDPTKKHLLGWQLRVRIID 631
LQH N+VRL E+ L+++ + L D+ F + H + +I++
Sbjct: 62 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ-----QILE 116
Query: 632 GIAQ-------DQHMNP--------------KISDFGMARMFGGDELQGNTKRIVGTYGY 670
IA +++ P K++DFG+A E GT GY
Sbjct: 117 SIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHG---FAGTPGY 173
Query: 671 MSPEYALEGVFSVKSDVFSFGVLMLEIL 698
+SPE + +S D+++ GV++ +L
Sbjct: 174 LSPEVLKKDPYSKPVDIWACGVILYILL 201
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 64/301 (21%), Positives = 114/301 (37%), Gaps = 70/301 (23%)
Query: 527 FSIQSKLGEGGFGPVYKGRLLN------GQEVAVKRLSNQSGQGLKE-FKNEMMLIAKL- 578
S LG G FG V + VAVK L + +E +E+ +++ L
Sbjct: 43 LSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLG 102
Query: 579 QHRNLVRLLGCCIEQGEKILIYEY--------MVNKSLDVFLFDPTKKHLLGW------- 623
H N+V LLG C G ++I EY + + D F+ T ++
Sbjct: 103 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 162
Query: 624 ----QLRVRIIDGIAQDQHMN------------------PKISDFGMARMFGGDE---LQ 658
++ G+A N KI DFG+AR D ++
Sbjct: 163 EDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 222
Query: 659 GNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS--SKKNTGV-YNTDSFNLL 715
GN + V +M+PE V++ +SDV+S+G+ + E+ S S G+ ++ + ++
Sbjct: 223 GNARLPVK---WMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMI 279
Query: 716 GHAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNE 775
+ + + A M +++ C + RPT +V +I +
Sbjct: 280 KEGFRMLSPEHAPAEMYDIMKT----------------CWDADPLKRPTFKQIVQLIEKQ 323
Query: 776 L 776
+
Sbjct: 324 I 324
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 98/211 (46%), Gaps = 36/211 (17%)
Query: 523 ATENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQ-GLK-EFKNEMMLIAKLQ 579
AT + +++G G +G VYK R +G VA+K + +G+ GL E+ L+ +L+
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 580 ---HRNLVRLLGCCI-----EQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLR----- 626
H N+VRL+ C + + L++E+ V++ L +L L ++
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEH-VDQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 627 -VRIIDGIAQD----QHMNP-----------KISDFGMARMFGGDELQGNTKRIVGTYGY 670
+R +D + + + + P K++DFG+AR++ Q +V T Y
Sbjct: 121 FLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYS---YQMALDPVVVTLWY 177
Query: 671 MSPEYALEGVFSVKSDVFSFGVLMLEILSSK 701
+PE L+ ++ D++S G + E+ K
Sbjct: 178 RAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 93/199 (46%), Gaps = 24/199 (12%)
Query: 526 NFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVR 585
++ ++G G FG VYKG+ V + ++ + Q L+ FKNE+ ++ K +H N++
Sbjct: 13 QITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 72
Query: 586 LLGCCIEQGEKIL--------IYEYMVNKSLDVF----LFDPTKKHLLGWQ-LRVRII-- 630
+G + I+ +Y ++ + S F L D ++ G L + I
Sbjct: 73 FMGYSTKPQLAIVTQWCEGSSLYHHL-HASETKFEMKKLIDIARQTARGMDYLHAKSIIH 131
Query: 631 -----DGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYAL---EGVFS 682
+ I + KI DFG+A + +++ G+ +M+PE +S
Sbjct: 132 RDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYS 191
Query: 683 VKSDVFSFGVLMLEILSSK 701
+SDV++FG+++ E+++ +
Sbjct: 192 FQSDVYAFGIVLYELMTGQ 210
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 94/221 (42%), Gaps = 48/221 (21%)
Query: 525 ENFSIQSKLGEGGFGPVYKG------RLLNGQEVAVKRLSNQSGQGLKEFKNEM----ML 574
+ + LG G FG V + + + VAVK L + G E + M +L
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKML--KEGATHSEHRALMSELKIL 84
Query: 575 IAKLQHRNLVRLLGCCIEQGEKIL-IYEYMVNKSLDVFL------FDPTK---------- 617
I H N+V LLG C + G ++ I E+ +L +L F P K
Sbjct: 85 IHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF 144
Query: 618 ---KHLLGWQLRV-RIIDGIAQDQHMNP---------------KISDFGMARMFGGDELQ 658
+HL+ + +V + ++ +A + ++ KI DFG+AR D
Sbjct: 145 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 204
Query: 659 GNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS 699
+M+PE + V++++SDV+SFGVL+ EI S
Sbjct: 205 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 94/214 (43%), Gaps = 38/214 (17%)
Query: 515 FSFASVTAATENFSIQSKLGEGGFGPVYKG-RLLNGQEVAVKRLSNQ--SGQGLKEFKNE 571
F + T ++N+ ++ +LG+G F V + G E A K ++ + S + ++ + E
Sbjct: 19 FMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLERE 78
Query: 572 MMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSL--DV----FLFDPTKKHLLGWQL 625
+ KLQH N+VRL E+ L+++ + L D+ F + H +
Sbjct: 79 ARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ--- 135
Query: 626 RVRIIDGIAQ-------DQHMNP--------------KISDFGMARMFGGDELQGNTKRI 664
+I++ IA +++ P K++DFG+A E
Sbjct: 136 --QILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHG---F 190
Query: 665 VGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEIL 698
GT GY+SPE + +S D+++ GV++ +L
Sbjct: 191 AGTPGYLSPEVLKKDPYSKPVDIWACGVILYILL 224
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 102/237 (43%), Gaps = 43/237 (18%)
Query: 520 VTAATENFSIQSKLGEGGFGPVYKGRLLNGQ----EVAVKRLSNQ--SGQGLKEFKNEMM 573
V + F++ LG+G FG V + +L +VAVK L + ++EF E
Sbjct: 18 VLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAA 77
Query: 574 LIAKLQHRNLVRLLGCCIEQGEK------ILIYEYMVNKSLDVFLFDP---TKKHLLGWQ 624
+ + H ++ +L+G + K ++I +M + L FL L Q
Sbjct: 78 CMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQ 137
Query: 625 LRVRIIDGIA----------------------QDQHMNPKISDFGMAR-MFGGDEL-QGN 660
VR + IA + M ++DFG++R ++ GD QG
Sbjct: 138 TLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGC 197
Query: 661 TKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKN--TGVYNTDSFNLL 715
++ +++ E + +++V SDV++FGV M EI++ + G+ N + +N L
Sbjct: 198 ASKL--PVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYL 252
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 92/208 (44%), Gaps = 38/208 (18%)
Query: 521 TAATENFSIQSKLGEGGFGPVYKG-RLLNGQEVAVKRLSNQ--SGQGLKEFKNEMMLIAK 577
T ++N+ ++ +LG+G F V + G E A K ++ + S + ++ + E + K
Sbjct: 2 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRK 61
Query: 578 LQHRNLVRLLGCCIEQGEKILIYEYMVNKSL--DV----FLFDPTKKHLLGWQLRVRIID 631
LQH N+VRL E+ L+++ + L D+ F + H + +I++
Sbjct: 62 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ-----QILE 116
Query: 632 GIAQ-------DQHMNP--------------KISDFGMARMFGGDELQGNTKRIVGTYGY 670
IA +++ P K++DFG+A E GT GY
Sbjct: 117 SIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHG---FAGTPGY 173
Query: 671 MSPEYALEGVFSVKSDVFSFGVLMLEIL 698
+SPE + +S D+++ GV++ +L
Sbjct: 174 LSPEVLKKDPYSKPVDIWACGVILYILL 201
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 121/300 (40%), Gaps = 65/300 (21%)
Query: 525 ENFSIQSKLGEGGFGPVYKG------RLLNGQEVAVKRLSNQSGQGLKEFKNEM----ML 574
+ + LG G FG V + + + VAVK L + G E + M +L
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKML--KEGATHSEHRALMSELKIL 75
Query: 575 IAKLQHRNLVRLLGCCIEQGEKIL-IYEYMVNKSLDVFL------FDPTK---------- 617
I H N+V LLG C + G ++ I E+ +L +L F P K
Sbjct: 76 IHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF 135
Query: 618 ---KHLLGWQLRV-RIIDGIAQDQHMNP---------------KISDFGMARMFGGDELQ 658
+HL+ + +V + ++ +A + ++ KI DFG+AR D
Sbjct: 136 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 195
Query: 659 GNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS--SKKNTGVYNTDSFNLLG 716
+M+PE + V++++SDV+SFGVL+ EI S + GV + F
Sbjct: 196 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF---- 251
Query: 717 HAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNEL 776
C+ + M + + P + + + L C RPT S++V + N L
Sbjct: 252 -----CRRLKEGTRMR---APDYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHLGNLL 300
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 121/300 (40%), Gaps = 65/300 (21%)
Query: 525 ENFSIQSKLGEGGFGPVYKG------RLLNGQEVAVKRLSNQSGQGLKEFKNEM----ML 574
+ + LG G FG V + + + VAVK L + G E + M +L
Sbjct: 29 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKML--KEGATHSEHRALMSELKIL 86
Query: 575 IAKLQHRNLVRLLGCCIEQGEKIL-IYEYMVNKSLDVFL------FDPTKK--------- 618
I H N+V LLG C + G ++ I E+ +L +L F P K+
Sbjct: 87 IHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDF 146
Query: 619 ----HLLGWQLRV-RIIDGIAQDQHMNP---------------KISDFGMARMFGGDELQ 658
HL+ + +V + ++ +A + ++ KI DFG+AR D
Sbjct: 147 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 206
Query: 659 GNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS--SKKNTGVYNTDSFNLLG 716
+M+PE + V++++SDV+SFGVL+ EI S + GV + F
Sbjct: 207 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF---- 262
Query: 717 HAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNEL 776
C+ + M + + P + + + L C RPT S++V + N L
Sbjct: 263 -----CRRLKEGTRMR---APDYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHLGNLL 311
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 86/200 (43%), Gaps = 22/200 (11%)
Query: 524 TENFSIQSKLGEGGFGPVYKG-RLLNGQEVAVKRLSNQSGQGLKE-FKNEMMLIAKLQHR 581
E++ + LGEG G V + + VAVK + + E K E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 582 NLVRLLGCCIEQGEKILIYEYMVNKSL------DVFLFDPTKK-------------HLLG 622
N+V+ G E + L EY L D+ + +P + H +G
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 623 WQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFS 682
R + + D+ N KISDFG+A +F + + ++ GT Y++PE F
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 683 VKS-DVFSFGVLMLEILSSK 701
+ DV+S G+++ +L+ +
Sbjct: 185 AEPVDVWSCGIVLTAMLAGE 204
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 91/199 (45%), Gaps = 27/199 (13%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKR-LSNQSGQGLKEFK-NEMMLIAKLQHR 581
E + K+GEG +G V+K R + GQ VA+K+ L ++ +K+ E+ ++ +L+H
Sbjct: 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHP 62
Query: 582 NLVRLLGCCIEQGEKILIYEY---MVNKSLDVFLFDPTKKHL---LGWQL---------- 625
NLV LL + L++EY V LD + +HL + WQ
Sbjct: 63 NLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRG-VPEHLVKSITWQTLQAVNFCHKH 121
Query: 626 ----RVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYAL-EGV 680
R + I +H K+ DFG AR+ G + + V T Y SPE + +
Sbjct: 122 NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDE--VATRWYRSPELLVGDTQ 179
Query: 681 FSVKSDVFSFGVLMLEILS 699
+ DV++ G + E+LS
Sbjct: 180 YGPPVDVWAIGCVFAELLS 198
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 121/300 (40%), Gaps = 65/300 (21%)
Query: 525 ENFSIQSKLGEGGFGPVYKG------RLLNGQEVAVKRLSNQSGQGLKEFKNEM----ML 574
+ + LG G FG V + + + VAVK L + G E + M +L
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKML--KEGATHSEHRALMSELKIL 75
Query: 575 IAKLQHRNLVRLLGCCIEQGEKIL-IYEYMVNKSLDVFL------FDPTK---------- 617
I H N+V LLG C + G ++ I E+ +L +L F P K
Sbjct: 76 IHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF 135
Query: 618 ---KHLLGWQLRV-RIIDGIAQDQHMNP---------------KISDFGMARMFGGDELQ 658
+HL+ + +V + ++ +A + ++ KI DFG+AR D
Sbjct: 136 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 195
Query: 659 GNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS--SKKNTGVYNTDSFNLLG 716
+M+PE + V++++SDV+SFGVL+ EI S + GV + F
Sbjct: 196 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF---- 251
Query: 717 HAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNEL 776
C+ + M + + P + + + L C RPT S++V + N L
Sbjct: 252 -----CRRLKEGTRMR---APDYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHLGNLL 300
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 89/198 (44%), Gaps = 25/198 (12%)
Query: 525 ENFSIQSKLGEGGFGPVYKG-RLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNL 583
E F + KLGEG +G VYK GQ VA+K++ +S L+E E+ ++ + ++
Sbjct: 29 EVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHV 86
Query: 584 VRLLGCCIEQGEKILIYEY-----------MVNKSLD----VFLFDPTKKHLLGWQLRVR 628
V+ G + + ++ EY + NK+L + T K L +
Sbjct: 87 VKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRK 146
Query: 629 IIDGIAQ-----DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSV 683
I I + + K++DFG+A + N ++GT +M+PE E ++
Sbjct: 147 IHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNX--VIGTPFWMAPEVIQEIGYNC 204
Query: 684 KSDVFSFGVLMLEILSSK 701
+D++S G+ +E+ K
Sbjct: 205 VADIWSLGITAIEMAEGK 222
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 95/203 (46%), Gaps = 32/203 (15%)
Query: 526 NFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVR 585
++ ++G G FG VYKG+ V + ++ + Q L+ FKNE+ ++ K +H N++
Sbjct: 25 QITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 84
Query: 586 LLGCCIEQGEKIL--------IYEYMVNKSLDVF----LFDPTKKHLLGWQ-LRVRII-- 630
+G + I+ +Y ++ + S F L D ++ G L + I
Sbjct: 85 FMGYSTKPQLAIVTQWCEGSSLYHHL-HASETKFEMKKLIDIARQTARGMDYLHAKSIIH 143
Query: 631 -----DGIAQDQHMNPKISDFGMA----RMFGGDELQGNTKRIVGTYGYMSPEYAL---E 678
+ I + KI DFG+A R G + + ++ G+ +M+PE
Sbjct: 144 RDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFE----QLSGSILWMAPEVIRMQDS 199
Query: 679 GVFSVKSDVFSFGVLMLEILSSK 701
+S +SDV++FG+++ E+++ +
Sbjct: 200 NPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 121/300 (40%), Gaps = 65/300 (21%)
Query: 525 ENFSIQSKLGEGGFGPVYKG------RLLNGQEVAVKRLSNQSGQGLKEFKNEM----ML 574
+ + LG G FG V + + + VAVK L + G E + M +L
Sbjct: 64 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKML--KEGATHSEHRALMSELKIL 121
Query: 575 IAKLQHRNLVRLLGCCIEQGEKIL-IYEYMVNKSLDVFL------FDPTK---------- 617
I H N+V LLG C + G ++ I E+ +L +L F P K
Sbjct: 122 IHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF 181
Query: 618 ---KHLLGWQLRV-RIIDGIAQDQHMNP---------------KISDFGMARMFGGDELQ 658
+HL+ + +V + ++ +A + ++ KI DFG+AR D
Sbjct: 182 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 241
Query: 659 GNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS--SKKNTGVYNTDSFNLLG 716
+M+PE + V++++SDV+SFGVL+ EI S + GV + F
Sbjct: 242 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF---- 297
Query: 717 HAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVVSMINNEL 776
C+ + M + + P + + + L C RPT S++V + N L
Sbjct: 298 -----CRRLKEGTRMR---APDYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHLGNLL 346
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 95/194 (48%), Gaps = 24/194 (12%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSN--QSGQGLKEFKNEMMLIAKLQHRN 582
E F+ ++G+G FG VYKG + +EV ++ + ++ +++ + E+ ++++
Sbjct: 19 ELFTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 78
Query: 583 LVRLLGCCIEQGEKILIYEYMVNKS-LDVFLFDPTKKHLLGWQLRVRIIDG--------- 632
+ R G ++ + +I EY+ S LD+ P ++ + LR I+ G
Sbjct: 79 ITRYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIATILR-EILKGLDYLHSERK 137
Query: 633 IAQD---------QHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSV 683
I +D + + K++DFG+A +++ N VGT +M+PE + +
Sbjct: 138 IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNX--FVGTPFWMAPEVIKQSAYDF 195
Query: 684 KSDVFSFGVLMLEI 697
K+D++S G+ +E+
Sbjct: 196 KADIWSLGITAIEL 209
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 88/207 (42%), Gaps = 41/207 (19%)
Query: 524 TENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQG--LKEFKNEMMLIAKLQH 580
E ++I LG+G FG V K + + QE AVK ++ S + E+ L+ KL H
Sbjct: 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH 80
Query: 581 RNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPT-KKHLLGWQLRVRIIDGI------ 633
N+++L + ++ E L FD K+ RII +
Sbjct: 81 PNIMKLFEILEDSSSFYIVGELYTGGEL----FDEIIKRKRFSEHDAARIIKQVFSGITY 136
Query: 634 -------------------AQDQHMNPKISDFGMARMFGGDELQGNTKRI--VGTYGYMS 672
++++ + KI DFG++ F Q NTK +GT Y++
Sbjct: 137 MHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF-----QQNTKMKDRIGTAYYIA 191
Query: 673 PEYALEGVFSVKSDVFSFGVLMLEILS 699
PE L G + K DV+S GV++ +LS
Sbjct: 192 PE-VLRGTYDEKCDVWSAGVILYILLS 217
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 98/211 (46%), Gaps = 36/211 (17%)
Query: 523 ATENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQ-GLK-EFKNEMMLIAKLQ 579
AT + +++G G +G VYK R +G VA+K + +G+ GL E+ L+ +L+
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 580 ---HRNLVRLLGCCI-----EQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLR----- 626
H N+VRL+ C + + L++E+ V++ L +L L ++
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEH-VDQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 627 -VRIIDGIAQD----QHMNP-----------KISDFGMARMFGGDELQGNTKRIVGTYGY 670
+R +D + + + + P K++DFG+AR++ Q +V T Y
Sbjct: 121 FLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYS---YQMALFPVVVTLWY 177
Query: 671 MSPEYALEGVFSVKSDVFSFGVLMLEILSSK 701
+PE L+ ++ D++S G + E+ K
Sbjct: 178 RAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 88/207 (42%), Gaps = 41/207 (19%)
Query: 524 TENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQG--LKEFKNEMMLIAKLQH 580
E ++I LG+G FG V K + + QE AVK ++ S + E+ L+ KL H
Sbjct: 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH 80
Query: 581 RNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPT-KKHLLGWQLRVRIIDGI------ 633
N+++L + ++ E L FD K+ RII +
Sbjct: 81 PNIMKLFEILEDSSSFYIVGELYTGGEL----FDEIIKRKRFSEHDAARIIKQVFSGITY 136
Query: 634 -------------------AQDQHMNPKISDFGMARMFGGDELQGNTKRI--VGTYGYMS 672
++++ + KI DFG++ F Q NTK +GT Y++
Sbjct: 137 MHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF-----QQNTKMKDRIGTAYYIA 191
Query: 673 PEYALEGVFSVKSDVFSFGVLMLEILS 699
PE L G + K DV+S GV++ +LS
Sbjct: 192 PE-VLRGTYDEKCDVWSAGVILYILLS 217
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 97/223 (43%), Gaps = 36/223 (16%)
Query: 522 AATENFSIQSK-------LGEGGFGPVYKGRLLNGQ----EVAVKRLSNQSGQGLKE-FK 569
A+T ++ IQ + +GEG FG V++G ++ + VA+K N + ++E F
Sbjct: 2 ASTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFL 61
Query: 570 NEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFL------FDPTKKHLLGW 623
E + + + H ++V+L+G I + +I E L FL D L +
Sbjct: 62 QEALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAY 120
Query: 624 QLRVRII----------DGIAQDQHMNP----KISDFGMARMFGGDELQGNTKRIVGTYG 669
QL + D A++ ++ K+ DFG++R + D +
Sbjct: 121 QLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIK 179
Query: 670 YMSPEYALEGVFSVKSDVFSFGVLMLEIL--SSKKNTGVYNTD 710
+M+PE F+ SDV+ FGV M EIL K GV N D
Sbjct: 180 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND 222
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 94/203 (46%), Gaps = 32/203 (15%)
Query: 526 NFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVR 585
++ ++G G FG VYKG+ V + ++ + Q L+ FKNE+ ++ K +H N++
Sbjct: 25 QITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 84
Query: 586 LLGCCIEQGEKIL--------IYEYMVNKSLDVF----LFDPTKKHLLGWQ-LRVRII-- 630
+G I+ +Y ++ + S F L D ++ G L + I
Sbjct: 85 FMGYSTAPQLAIVTQWCEGSSLYHHL-HASETKFEMKKLIDIARQTARGMDYLHAKSIIH 143
Query: 631 -----DGIAQDQHMNPKISDFGMA----RMFGGDELQGNTKRIVGTYGYMSPEYAL---E 678
+ I + KI DFG+A R G + + ++ G+ +M+PE
Sbjct: 144 RDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFE----QLSGSILWMAPEVIRMQDS 199
Query: 679 GVFSVKSDVFSFGVLMLEILSSK 701
+S +SDV++FG+++ E+++ +
Sbjct: 200 NPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 93/219 (42%), Gaps = 45/219 (20%)
Query: 527 FSIQSKLGEGGFGPVYKG-RLLNGQEVAVKRLSN---QSGQGLKEFKNEMMLIAKLQHRN 582
+ + KLG+G +G V+K G+ VAVK++ + S + F+ M+L H N
Sbjct: 11 YELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHEN 70
Query: 583 LVRLLGCCIEQGEK--ILIYEYM---VNKSLDVFLFDPTKKHLLGWQLRVRIID----GI 633
+V LL ++ L+++YM ++ + + +P K + +QL +++I G
Sbjct: 71 IVNLLNVLRADNDRDVYLVFDYMETDLHAVIRANILEPVHKQYVVYQL-IKVIKYLHSGG 129
Query: 634 AQDQHMNP-----------KISDFGMARMFGG-------------------DELQGNTKR 663
+ M P K++DFG++R F D+ Q
Sbjct: 130 LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTD 189
Query: 664 IVGTYGYMSPEYALEGVFSVKS-DVFSFGVLMLEILSSK 701
V T Y +PE L K D++S G ++ EIL K
Sbjct: 190 YVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 90/212 (42%), Gaps = 41/212 (19%)
Query: 522 AATENFSIQSKLGEGGFGPVYK------GRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLI 575
+ E++ + +G G +G K G++L +E+ ++ Q L +E+ L+
Sbjct: 3 SRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLV---SEVNLL 59
Query: 576 AKLQHRNLVRLLGCCIEQGEKIL--IYEYMVNKSLDVFLFDPTK-KHLLGWQLRVRII-- 630
+L+H N+VR I++ L + EY L + TK + L + +R++
Sbjct: 60 RELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQ 119
Query: 631 ------------DG-------------IAQDQHMNPKISDFGMARMFGGDELQGNTKRIV 665
DG + D N K+ DFG+AR+ D K V
Sbjct: 120 LTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD--TSFAKTFV 177
Query: 666 GTYGYMSPEYALEGVFSVKSDVFSFGVLMLEI 697
GT YMSPE ++ KSD++S G L+ E+
Sbjct: 178 GTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 96/198 (48%), Gaps = 36/198 (18%)
Query: 532 KLGEGGFGPVYKG--RLLNGQ-EVAVKRLSNQSGQG-LKEFKNEMMLIAKLQHRNLVRLL 587
+LG G FG V +G R+ Q +VA+K L + + +E E ++ +L + +VRL+
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 402
Query: 588 GCCIEQGEKILI----------YEYMVNKSLDVFLFDPTK--------------KHLLGW 623
G C Q E +++ ++++V K ++ + + + K+ +
Sbjct: 403 GVC--QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHR 460
Query: 624 QLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTY--GYMSPEYALEGVF 681
L R + + ++H KISDFG+++ G D+ T R G + + +PE F
Sbjct: 461 NLAARNV--LLVNRHYA-KISDFGLSKALGADD-SYYTARSAGKWPLKWYAPECINFRKF 516
Query: 682 SVKSDVFSFGVLMLEILS 699
S +SDV+S+GV M E LS
Sbjct: 517 SSRSDVWSYGVTMWEALS 534
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 90/212 (42%), Gaps = 41/212 (19%)
Query: 522 AATENFSIQSKLGEGGFGPVYK------GRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLI 575
+ E++ + +G G +G K G++L +E+ ++ Q L +E+ L+
Sbjct: 3 SRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLV---SEVNLL 59
Query: 576 AKLQHRNLVRLLGCCIEQGEKIL--IYEYMVNKSLDVFLFDPTK-KHLLGWQLRVRII-- 630
+L+H N+VR I++ L + EY L + TK + L + +R++
Sbjct: 60 RELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQ 119
Query: 631 ------------DG-------------IAQDQHMNPKISDFGMARMFGGDELQGNTKRIV 665
DG + D N K+ DFG+AR+ D K V
Sbjct: 120 LTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD--TSFAKAFV 177
Query: 666 GTYGYMSPEYALEGVFSVKSDVFSFGVLMLEI 697
GT YMSPE ++ KSD++S G L+ E+
Sbjct: 178 GTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 93/204 (45%), Gaps = 21/204 (10%)
Query: 517 FASVTAATENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFKNEMMLI 575
SV + ++ K+G+G G VY + GQEVA+++++ Q + NE++++
Sbjct: 13 IVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVM 72
Query: 576 AKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDP----------------TKKH 619
+ ++ N+V L + E ++ EY+ SL + + +
Sbjct: 73 RENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEF 132
Query: 620 LLGWQLRVRII--DGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYAL 677
L Q+ R I D I + K++DFG ++ + +T +VGT +M+PE
Sbjct: 133 LHSNQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST--MVGTPYWMAPEVVT 190
Query: 678 EGVFSVKSDVFSFGVLMLEILSSK 701
+ K D++S G++ +E++ +
Sbjct: 191 RKAYGPKVDIWSLGIMAIEMIEGE 214
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 101/231 (43%), Gaps = 36/231 (15%)
Query: 514 LFSFASVTAATENFSIQSK-------LGEGGFGPVYKGRLLNGQ----EVAVKRLSNQSG 562
L+ ++ ++T ++ IQ + +GEG FG V++G ++ + VA+K N +
Sbjct: 20 LYFQGAMGSSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTS 79
Query: 563 QGLKE-FKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFL------FDP 615
++E F E + + + H ++V+L+G I + +I E L FL D
Sbjct: 80 DSVREKFLQEALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKYSLDL 138
Query: 616 TKKHLLGWQLRVRII----------DGIAQDQHMNP----KISDFGMARMFGGDELQGNT 661
L +QL + D A++ ++ K+ DFG++R + D
Sbjct: 139 ASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKA 197
Query: 662 KRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEIL--SSKKNTGVYNTD 710
+ +M+PE F+ SDV+ FGV M EIL K GV N D
Sbjct: 198 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND 248
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 95/222 (42%), Gaps = 36/222 (16%)
Query: 523 ATENFSIQSK-------LGEGGFGPVYKGRLLN----GQEVAVKRLSNQSGQGLKE-FKN 570
+T ++ IQ + +GEG FG V++G ++ VA+K N + ++E F
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 60
Query: 571 EMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFL------FDPTKKHLLGWQ 624
E + + + H ++V+L+G I + +I E L FL D L +Q
Sbjct: 61 EALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQ 119
Query: 625 LRVRII----------DGIAQDQHMNP----KISDFGMARMFGGDELQGNTKRIVGTYGY 670
L + D A++ ++ K+ DFG++R + D + +
Sbjct: 120 LSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTXXKASKGKLPIKW 178
Query: 671 MSPEYALEGVFSVKSDVFSFGVLMLEIL--SSKKNTGVYNTD 710
M+PE F+ SDV+ FGV M EIL K GV N D
Sbjct: 179 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND 220
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 96/212 (45%), Gaps = 30/212 (14%)
Query: 514 LFSFASVTAATENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFKN-- 570
+F S ++ + Q LG+G FG V + + GQE AVK +S + + + ++
Sbjct: 21 MFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLL 80
Query: 571 -EMMLIAKLQHRNLVRLLGCCIEQGEKILIYE-YMVNKSLDVFLFDPTKKHLLGWQLRVR 628
E+ L+ +L H N+++L ++G L+ E Y + D + + ++ +
Sbjct: 81 REVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQ 140
Query: 629 IIDGI---------------------AQDQHMNPKISDFGMARMFGGDELQGNTKRIVGT 667
++ GI ++ + N +I DFG++ F E K +GT
Sbjct: 141 VLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKKMKDKIGT 197
Query: 668 YGYMSPEYALEGVFSVKSDVFSFGVLMLEILS 699
Y++PE L G + K DV+S GV++ +LS
Sbjct: 198 AYYIAPE-VLHGTYDEKCDVWSTGVILYILLS 228
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 90/201 (44%), Gaps = 29/201 (14%)
Query: 525 ENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFK-----NEMMLIAKL 578
E+F LGEG F V R L +E A+K L + +KE K E ++++L
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRL 94
Query: 579 QHRNLVRLLGCCIEQGEKILI-YEYMVNKSLDVFL-----FDPT------------KKHL 620
H V+L C + EK+ Y N L ++ FD T ++L
Sbjct: 95 DHPFFVKLY-FCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 153
Query: 621 LGWQLRVRII--DGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALE 678
G + R + + I ++ M+ +I+DFG A++ + Q VGT Y+SPE E
Sbjct: 154 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 213
Query: 679 GVFSVKSDVFSFGVLMLEILS 699
SD+++ G ++ ++++
Sbjct: 214 KSACKSSDLWALGCIIYQLVA 234
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 94/194 (48%), Gaps = 24/194 (12%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSN--QSGQGLKEFKNEMMLIAKLQHRN 582
E F+ K+G+G FG V+KG Q+V ++ + ++ +++ + E+ ++++
Sbjct: 7 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 66
Query: 583 LVRLLGCCIEQGEKILIYEYMVNKS-LDVFLFDPTKKHLLGWQLRVRIIDG--------- 632
+ + G ++ + +I EY+ S LD+ P + + LR I+ G
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILR-EILKGLDYLHSEKK 125
Query: 633 IAQD---------QHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSV 683
I +D +H K++DFG+A +++ NT VGT +M+PE + +
Sbjct: 126 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT--FVGTPFWMAPEVIKQSAYDS 183
Query: 684 KSDVFSFGVLMLEI 697
K+D++S G+ +E+
Sbjct: 184 KADIWSLGITAIEL 197
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 92/220 (41%), Gaps = 49/220 (22%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
+N + +G G +G VYKG L+ + VAVK S + Q KN + + ++H N+
Sbjct: 13 DNLKLLELIGRGRYGAVYKGS-LDERPVAVKVFSFANRQNFINEKN-IYRVPLMEHDNIA 70
Query: 585 RLL-----GCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIA----- 634
R + + E +L+ EY N SL +L T + +L + G+A
Sbjct: 71 RFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSSCRLAHSVTRGLAYLHTE 130
Query: 635 --QDQHMNPK--------------------ISDFGMARMFGGDEL----QGNTKRI--VG 666
+ H P ISDFG++ G+ L + + I VG
Sbjct: 131 LPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVG 190
Query: 667 TYGYMSPEYALEGVFSVKS--------DVFSFGVLMLEIL 698
T YM+PE LEG +++ D+++ G++ EI
Sbjct: 191 TIRYMAPE-VLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 96/212 (45%), Gaps = 30/212 (14%)
Query: 514 LFSFASVTAATENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFKN-- 570
+F S ++ + Q LG+G FG V + + GQE AVK +S + + + ++
Sbjct: 15 MFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLL 74
Query: 571 -EMMLIAKLQHRNLVRLLGCCIEQGEKILIYE-YMVNKSLDVFLFDPTKKHLLGWQLRVR 628
E+ L+ +L H N+++L ++G L+ E Y + D + + ++ +
Sbjct: 75 REVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQ 134
Query: 629 IIDGI---------------------AQDQHMNPKISDFGMARMFGGDELQGNTKRIVGT 667
++ GI ++ + N +I DFG++ F E K +GT
Sbjct: 135 VLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKKMKDKIGT 191
Query: 668 YGYMSPEYALEGVFSVKSDVFSFGVLMLEILS 699
Y++PE L G + K DV+S GV++ +LS
Sbjct: 192 AYYIAPE-VLHGTYDEKCDVWSTGVILYILLS 222
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 98/209 (46%), Gaps = 47/209 (22%)
Query: 525 ENF-SIQSKLGEGGFGPVYKGRLLNGQE---VAVKRLSNQSGQGLKEFKNEMMLIAKLQH 580
E+F I +LG+G FG VYK + N + A K + +S + L+++ E+ ++A H
Sbjct: 36 EDFWEIIGELGDGAFGKVYKAQ--NKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDH 93
Query: 581 RNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRV---RIIDGI--AQ 635
N+V+LL + ++ E+ ++D + + ++ L Q++V + +D +
Sbjct: 94 PNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE-LERPLTESQIQVVCKQTLDALNYLH 152
Query: 636 DQHM----------------NPKISDFGMARMFGGDELQGNTKRI------VGTYGYMSP 673
D + + K++DFG++ NT+ I +GT +M+P
Sbjct: 153 DNKIIHRDLKAGNILFTLDGDIKLADFGVS--------AKNTRXIQRRDSFIGTPYWMAP 204
Query: 674 EYAL-----EGVFSVKSDVFSFGVLMLEI 697
E + + + K+DV+S G+ ++E+
Sbjct: 205 EVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 99/227 (43%), Gaps = 36/227 (15%)
Query: 518 ASVTAATENFSIQSK-------LGEGGFGPVYKGRLLNGQ----EVAVKRLSNQSGQGLK 566
++ ++T ++ IQ + +GEG FG V++G ++ + VA+K N + ++
Sbjct: 1 GAMGSSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVR 60
Query: 567 E-FKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFL------FDPTKKH 619
E F E + + + H ++V+L+G I + +I E L FL D
Sbjct: 61 EKFLQEALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLI 119
Query: 620 LLGWQLRVRII----------DGIAQDQHMNP----KISDFGMARMFGGDELQGNTKRIV 665
L +QL + D A++ ++ K+ DFG++R + D +
Sbjct: 120 LYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGK 178
Query: 666 GTYGYMSPEYALEGVFSVKSDVFSFGVLMLEIL--SSKKNTGVYNTD 710
+M+PE F+ SDV+ FGV M EIL K GV N D
Sbjct: 179 LPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND 225
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 94/194 (48%), Gaps = 24/194 (12%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSN--QSGQGLKEFKNEMMLIAKLQHRN 582
E F+ K+G+G FG V+KG Q+V ++ + ++ +++ + E+ ++++
Sbjct: 27 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 86
Query: 583 LVRLLGCCIEQGEKILIYEYMVNKS-LDVFLFDPTKKHLLGWQLRVRIIDG--------- 632
+ + G ++ + +I EY+ S LD+ P + + LR I+ G
Sbjct: 87 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILR-EILKGLDYLHSEKK 145
Query: 633 IAQD---------QHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSV 683
I +D +H K++DFG+A +++ NT VGT +M+PE + +
Sbjct: 146 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT--FVGTPFWMAPEVIKQSAYDS 203
Query: 684 KSDVFSFGVLMLEI 697
K+D++S G+ +E+
Sbjct: 204 KADIWSLGITAIEL 217
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 98/209 (46%), Gaps = 47/209 (22%)
Query: 525 ENF-SIQSKLGEGGFGPVYKGRLLNGQE---VAVKRLSNQSGQGLKEFKNEMMLIAKLQH 580
E+F I +LG+G FG VYK + N + A K + +S + L+++ E+ ++A H
Sbjct: 36 EDFWEIIGELGDGAFGKVYKAQ--NKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDH 93
Query: 581 RNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRV---RIIDGI--AQ 635
N+V+LL + ++ E+ ++D + + ++ L Q++V + +D +
Sbjct: 94 PNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE-LERPLTESQIQVVCKQTLDALNYLH 152
Query: 636 DQHM----------------NPKISDFGMARMFGGDELQGNTKRI------VGTYGYMSP 673
D + + K++DFG++ NT+ I +GT +M+P
Sbjct: 153 DNKIIHRDLKAGNILFTLDGDIKLADFGVS--------AKNTRTIQRRDSFIGTPYWMAP 204
Query: 674 EYAL-----EGVFSVKSDVFSFGVLMLEI 697
E + + + K+DV+S G+ ++E+
Sbjct: 205 EVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 96/206 (46%), Gaps = 46/206 (22%)
Query: 527 FSIQSKLGEGGFGPVYKGRLLNGQE---VAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNL 583
+ I +LG+G FG VYK + N + A K + +S + L+++ E+ ++A H N+
Sbjct: 39 WEIIGELGDGAFGKVYKAQ--NKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNI 96
Query: 584 VRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRV---RIIDGI--AQDQH 638
V+LL + ++ E+ ++D + + ++ L Q++V + +D + D
Sbjct: 97 VKLLDAFYYENNLWILIEFCAGGAVDAVMLE-LERPLTESQIQVVCKQTLDALNYLHDNK 155
Query: 639 M----------------NPKISDFGMARMFGGDELQGNTKRI------VGTYGYMSPEYA 676
+ + K++DFG++ NT+ I +GT +M+PE
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVS--------AKNTRXIQRRDXFIGTPYWMAPEVV 207
Query: 677 L-----EGVFSVKSDVFSFGVLMLEI 697
+ + + K+DV+S G+ ++E+
Sbjct: 208 MCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 91/213 (42%), Gaps = 43/213 (20%)
Query: 519 SVTAATENFSIQSKLGEGGFGPVYKG-RLLNGQEVAV-----KRLSNQSGQGLKEFKNEM 572
+ T TE + + +LG+G F V + ++L GQE A K+LS + Q L+ E
Sbjct: 5 TCTRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLE---REA 61
Query: 573 MLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSL--DV----FLFDPTKKHLLGWQLR 626
+ L+H N+VRL E+G LI++ + L D+ + + H +
Sbjct: 62 RICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQ---- 117
Query: 627 VRIIDGIAQDQHMN---------------------PKISDFGMARMFGGDELQGNTKRIV 665
+I++ + M K++DFG+A G+ Q
Sbjct: 118 -QILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGE--QQAWFGFA 174
Query: 666 GTYGYMSPEYALEGVFSVKSDVFSFGVLMLEIL 698
GT GY+SPE + + D+++ GV++ +L
Sbjct: 175 GTPGYLSPEVLRKDPYGKPVDLWACGVILYILL 207
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 95/222 (42%), Gaps = 36/222 (16%)
Query: 523 ATENFSIQSK-------LGEGGFGPVYKGRLLN----GQEVAVKRLSNQSGQGLKE-FKN 570
+T ++ IQ + +GEG FG V++G ++ VA+K N + ++E F
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 60
Query: 571 EMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFL------FDPTKKHLLGWQ 624
E + + + H ++V+L+G I + +I E L FL D L +Q
Sbjct: 61 EALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQ 119
Query: 625 LRVRII----------DGIAQDQHMNP----KISDFGMARMFGGDELQGNTKRIVGTYGY 670
L + D A++ ++ K+ DFG++R + D + +
Sbjct: 120 LSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKW 178
Query: 671 MSPEYALEGVFSVKSDVFSFGVLMLEIL--SSKKNTGVYNTD 710
M+PE F+ SDV+ FGV M EIL K GV N D
Sbjct: 179 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND 220
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 96/212 (45%), Gaps = 30/212 (14%)
Query: 514 LFSFASVTAATENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFKN-- 570
+F S ++ + Q LG+G FG V + + GQE AVK +S + + + ++
Sbjct: 38 MFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLL 97
Query: 571 -EMMLIAKLQHRNLVRLLGCCIEQGEKILIYE-YMVNKSLDVFLFDPTKKHLLGWQLRVR 628
E+ L+ +L H N+++L ++G L+ E Y + D + + ++ +
Sbjct: 98 REVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQ 157
Query: 629 IIDGI---------------------AQDQHMNPKISDFGMARMFGGDELQGNTKRIVGT 667
++ GI ++ + N +I DFG++ F E K +GT
Sbjct: 158 VLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKKMKDKIGT 214
Query: 668 YGYMSPEYALEGVFSVKSDVFSFGVLMLEILS 699
Y++PE L G + K DV+S GV++ +LS
Sbjct: 215 AYYIAPE-VLHGTYDEKCDVWSTGVILYILLS 245
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 95/222 (42%), Gaps = 36/222 (16%)
Query: 523 ATENFSIQSK-------LGEGGFGPVYKGRLLN----GQEVAVKRLSNQSGQGLKE-FKN 570
+T ++ IQ + +GEG FG V++G ++ VA+K N + ++E F
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 60
Query: 571 EMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFL------FDPTKKHLLGWQ 624
E + + + H ++V+L+G I + +I E L FL D L +Q
Sbjct: 61 EALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQ 119
Query: 625 LRVRII----------DGIAQDQHMNP----KISDFGMARMFGGDELQGNTKRIVGTYGY 670
L + D A++ ++ K+ DFG++R + D + +
Sbjct: 120 LSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKW 178
Query: 671 MSPEYALEGVFSVKSDVFSFGVLMLEIL--SSKKNTGVYNTD 710
M+PE F+ SDV+ FGV M EIL K GV N D
Sbjct: 179 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND 220
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 88/206 (42%), Gaps = 32/206 (15%)
Query: 522 AATENFSIQSKLGEGGFGPVYKG-RLLNGQEVAVK-----RLSNQSGQGLKEFKNEMMLI 575
A N+ I LGEG FG V GQ+VA+K L+ QG + E+ +
Sbjct: 10 AHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG--RIEREISYL 67
Query: 576 AKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ 635
L+H ++++L + E I++ EY N+ D + + +II +
Sbjct: 68 RLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEY 127
Query: 636 ------------------DQHMNPKISDFGMARMFGGDELQGN-TKRIVGTYGYMSPEYA 676
D+H+N KI+DFG++ + GN K G+ Y +PE
Sbjct: 128 CHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMT----DGNFLKTSCGSPNYAAPEVI 183
Query: 677 LEGVFS-VKSDVFSFGVLMLEILSSK 701
+++ + DV+S GV++ +L +
Sbjct: 184 SGKLYAGPEVDVWSCGVILYVMLCRR 209
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 97/232 (41%), Gaps = 58/232 (25%)
Query: 518 ASVTAATENFSIQSK-------LGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKN 570
+ V TEN QS G FG V+K +LLN + VAVK Q Q + +
Sbjct: 10 SGVDLGTENLYFQSMPLQLLEVKARGRFGCVWKAQLLN-EYVAVKIFPIQDKQSWQN-EY 67
Query: 571 EMMLIAKLQHRNLVRLLGCCIEQGEKI-----LIYEYMVNKSLDVFLFDPTKKHLLGWQL 625
E+ + ++H N+++ +G ++G + LI + SL FL K +++ W
Sbjct: 68 EVYSLPGMKHENILQFIGA-EKRGTSVDVDLWLITAFHEKGSLSDFL----KANVVSWNE 122
Query: 626 RVRIIDGIA-------------QDQH-------------------MNPKISDFGMARMFG 653
I + +A +D H + I+DFG+A F
Sbjct: 123 LCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFE 182
Query: 654 GDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVF------SFGVLMLEILS 699
+ G+T VGT YM+PE LEG + + D F + G+++ E+ S
Sbjct: 183 AGKSAGDTHGQVGTRRYMAPE-VLEGAINFQRDAFLRIDMYAMGLVLWELAS 233
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 96/222 (43%), Gaps = 36/222 (16%)
Query: 523 ATENFSIQSK-------LGEGGFGPVYKGRLLNGQ----EVAVKRLSNQSGQGLKE-FKN 570
+T ++ IQ + +GEG FG V++G ++ + VA+K N + ++E F
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 60
Query: 571 EMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFL------FDPTKKHLLGWQ 624
E + + + H ++V+L+G I + +I E L FL D L +Q
Sbjct: 61 EALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQ 119
Query: 625 LRVRII----------DGIAQDQHMNP----KISDFGMARMFGGDELQGNTKRIVGTYGY 670
L + D A++ ++ K+ DFG++R + D + +
Sbjct: 120 LSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKW 178
Query: 671 MSPEYALEGVFSVKSDVFSFGVLMLEIL--SSKKNTGVYNTD 710
M+PE F+ SDV+ FGV M EIL K GV N D
Sbjct: 179 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND 220
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 97/224 (43%), Gaps = 36/224 (16%)
Query: 521 TAATENFSIQSK-------LGEGGFGPVYKGRLLNGQ----EVAVKRLSNQSGQGLKE-F 568
+ +T ++ IQ + +GEG FG V++G ++ + VA+K N + ++E F
Sbjct: 2 SGSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKF 61
Query: 569 KNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFL------FDPTKKHLLG 622
E + + + H ++V+L+G I + +I E L FL D L
Sbjct: 62 LQEALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYA 120
Query: 623 WQLRVRII----------DGIAQDQHMNP----KISDFGMARMFGGDELQGNTKRIVGTY 668
+QL + D A++ ++ K+ DFG++R + D +
Sbjct: 121 YQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPI 179
Query: 669 GYMSPEYALEGVFSVKSDVFSFGVLMLEIL--SSKKNTGVYNTD 710
+M+PE F+ SDV+ FGV M EIL K GV N D
Sbjct: 180 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND 223
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 96/198 (48%), Gaps = 36/198 (18%)
Query: 532 KLGEGGFGPVYKG--RLLNGQ-EVAVKRLSNQSGQG-LKEFKNEMMLIAKLQHRNLVRLL 587
+LG G FG V +G R+ Q +VA+K L + + +E E ++ +L + +VRL+
Sbjct: 17 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 76
Query: 588 GCCIEQGEKILI----------YEYMVNKSLDVFLFDPTK--------------KHLLGW 623
G C Q E +++ ++++V K ++ + + + K+ +
Sbjct: 77 GVC--QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHR 134
Query: 624 QLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTY--GYMSPEYALEGVF 681
L R + + ++H KISDFG+++ G D+ T R G + + +PE F
Sbjct: 135 DLAARNV--LLVNRHY-AKISDFGLSKALGADD-SYYTARSAGKWPLKWYAPECINFRKF 190
Query: 682 SVKSDVFSFGVLMLEILS 699
S +SDV+S+GV M E LS
Sbjct: 191 SSRSDVWSYGVTMWEALS 208
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 96/212 (45%), Gaps = 30/212 (14%)
Query: 514 LFSFASVTAATENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFKN-- 570
+F S ++ + Q LG+G FG V + + GQE AVK +S + + + ++
Sbjct: 39 MFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLL 98
Query: 571 -EMMLIAKLQHRNLVRLLGCCIEQGEKILIYE-YMVNKSLDVFLFDPTKKHLLGWQLRVR 628
E+ L+ +L H N+++L ++G L+ E Y + D + + ++ +
Sbjct: 99 REVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQ 158
Query: 629 IIDGI---------------------AQDQHMNPKISDFGMARMFGGDELQGNTKRIVGT 667
++ GI ++ + N +I DFG++ F E K +GT
Sbjct: 159 VLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKKMKDKIGT 215
Query: 668 YGYMSPEYALEGVFSVKSDVFSFGVLMLEILS 699
Y++PE L G + K DV+S GV++ +LS
Sbjct: 216 AYYIAPE-VLHGTYDEKCDVWSTGVILYILLS 246
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 88/206 (42%), Gaps = 32/206 (15%)
Query: 522 AATENFSIQSKLGEGGFGPVYKG-RLLNGQEVAVK-----RLSNQSGQGLKEFKNEMMLI 575
A N+ I LGEG FG V GQ+VA+K L+ QG + E+ +
Sbjct: 11 AHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG--RIEREISYL 68
Query: 576 AKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ 635
L+H ++++L + E I++ EY N+ D + + +II +
Sbjct: 69 RLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEY 128
Query: 636 ------------------DQHMNPKISDFGMARMFGGDELQGN-TKRIVGTYGYMSPEYA 676
D+H+N KI+DFG++ + GN K G+ Y +PE
Sbjct: 129 CHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMT----DGNFLKTSCGSPNYAAPEVI 184
Query: 677 LEGVFS-VKSDVFSFGVLMLEILSSK 701
+++ + DV+S GV++ +L +
Sbjct: 185 SGKLYAGPEVDVWSCGVILYVMLCRR 210
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 94/211 (44%), Gaps = 30/211 (14%)
Query: 515 FSFASVTAATENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFKN--- 570
F S ++ + Q LG+G FG V + + GQE AVK +S + + + ++
Sbjct: 16 FVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLR 75
Query: 571 EMMLIAKLQHRNLVRLLGCCIEQGEKILIYE-YMVNKSLDVFLFDPTKKHLLGWQLRVRI 629
E+ L+ +L H N+ +L ++G L+ E Y + D + + ++ ++
Sbjct: 76 EVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQV 135
Query: 630 IDGI---------------------AQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTY 668
+ GI ++ + N +I DFG++ F E K +GT
Sbjct: 136 LSGITYXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKKXKDKIGTA 192
Query: 669 GYMSPEYALEGVFSVKSDVFSFGVLMLEILS 699
Y++PE L G + K DV+S GV++ +LS
Sbjct: 193 YYIAPE-VLHGTYDEKCDVWSTGVILYILLS 222
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 128/296 (43%), Gaps = 49/296 (16%)
Query: 523 ATENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFK---NEMMLIAKL 578
+ ++F I LG G FG V+ R NG+ A+K L + LK+ + +E ++++ +
Sbjct: 4 SLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIV 63
Query: 579 QHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLF------DPTKK-----------HLL 621
H ++R+ G + + +I +Y+ L L +P K +L
Sbjct: 64 THPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLH 123
Query: 622 GWQLRVRII--DGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEG 679
+ R + + I D++ + KI+DFG A+ + T + GT Y++PE
Sbjct: 124 SKDIIYRDLKPENILLDKNGHIKITDFGFAKY-----VPDVTYXLCGTPDYIAPEVVSTK 178
Query: 680 VFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEV 739
++ D +SFG+L+ E+L+ T Y++++ + EL P NE
Sbjct: 179 PYNKSIDWWSFGILIYEMLAG--YTPFYDSNTMKTYEKILNA-------ELRFPPFFNED 229
Query: 740 SLPMLVRYINVALLC----VQENAED---RPTMSDVV--SMINNELFNLPSPKEPP 786
+L R I L +Q ED P +VV +++ N+ +P EPP
Sbjct: 230 VKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEVVWEKLLSR---NIETPYEPP 282
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 98/213 (46%), Gaps = 35/213 (16%)
Query: 518 ASVTAATENFSIQSK--------LGEGGFGPVYKGRLLN-GQEVAVKR-LSNQSGQGLKE 567
+ V TEN QS +GEG +G V K R + G+ VA+K+ L + + +K+
Sbjct: 10 SGVDLGTENLYFQSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKK 69
Query: 568 FK-NEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSL-DVFLFDPTKKHLLGWQL 625
E+ L+ +L+H NLV LL C ++ L++E++ + L D+ LF + + +
Sbjct: 70 IAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKY 129
Query: 626 RVRIIDGIA-------QDQHMNP-----------KISDFGMARMFGG-DELQGNTKRIVG 666
+II+GI + + P K+ DFG AR E+ + V
Sbjct: 130 LFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDE---VA 186
Query: 667 TYGYMSPEYALEGV-FSVKSDVFSFGVLMLEIL 698
T Y +PE + V + DV++ G L+ E+
Sbjct: 187 TRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMF 219
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 90/206 (43%), Gaps = 32/206 (15%)
Query: 522 AATENFSIQSKLGEGGFGPVYKG-RLLNGQEVAVK-----RLSNQSGQGLKEFKNEMMLI 575
A N+ I LGEG FG V GQ+VA+K L+ QG + E+ +
Sbjct: 1 AHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG--RIEREISYL 58
Query: 576 AKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ 635
L+H ++++L + E I++ EY N+ D + + +II +
Sbjct: 59 RLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEY 118
Query: 636 ------------------DQHMNPKISDFGMAR-MFGGDELQGNTKRIVGTYGYMSPEYA 676
D+H+N KI+DFG++ M G+ L+ + G+ Y +PE
Sbjct: 119 CHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC----GSPNYAAPEVI 174
Query: 677 LEGVFS-VKSDVFSFGVLMLEILSSK 701
+++ + DV+S GV++ +L +
Sbjct: 175 SGKLYAGPEVDVWSCGVILYVMLCRR 200
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 88/206 (42%), Gaps = 32/206 (15%)
Query: 522 AATENFSIQSKLGEGGFGPVYKG-RLLNGQEVAVK-----RLSNQSGQGLKEFKNEMMLI 575
A N+ I LGEG FG V GQ+VA+K L+ QG + E+ +
Sbjct: 5 AHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG--RIEREISYL 62
Query: 576 AKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ 635
L+H ++++L + E I++ EY N+ D + + +II +
Sbjct: 63 RLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEY 122
Query: 636 ------------------DQHMNPKISDFGMARMFGGDELQGN-TKRIVGTYGYMSPEYA 676
D+H+N KI+DFG++ + GN K G+ Y +PE
Sbjct: 123 CHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMT----DGNFLKTSCGSPNYAAPEVI 178
Query: 677 LEGVFS-VKSDVFSFGVLMLEILSSK 701
+++ + DV+S GV++ +L +
Sbjct: 179 SGKLYAGPEVDVWSCGVILYVMLCRR 204
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 89/197 (45%), Gaps = 27/197 (13%)
Query: 526 NFSIQSKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQSGQGLK---EFKNEMMLIAKLQHR 581
++ + LG G FG V G+ L G +VAVK L+ Q + L + + E+ + +H
Sbjct: 17 HYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHP 76
Query: 582 NLVRLLGCCIEQGEKILIYEYMVNKSLDVFL-----FDPTKKHLLGWQL--------RVR 628
++++L + ++ EY+ L ++ D + L Q+ R
Sbjct: 77 HIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHM 136
Query: 629 II------DGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFS 682
++ + + D HMN KI+DFG++ M E + G+ Y +PE +++
Sbjct: 137 VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF---LRXSCGSPNYAAPEVISGRLYA 193
Query: 683 -VKSDVFSFGVLMLEIL 698
+ D++S GV++ +L
Sbjct: 194 GPEVDIWSSGVILYALL 210
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 95/214 (44%), Gaps = 37/214 (17%)
Query: 518 ASVTAATENFSIQS------KLGEGGFGPVYKG-RLLNGQEVAVKRLSNQ--SGQGLKEF 568
+ V TEN QS +LG+G F V + ++L GQE A K ++ + S + ++
Sbjct: 9 SGVDLGTENLYFQSMYQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKL 68
Query: 569 KNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSL--DV----FLFDPTKKH--- 619
+ E + L+H N+VRL E+G LI++ + L D+ + + H
Sbjct: 69 EREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQ 128
Query: 620 -LLGWQLRVRIIDGIAQDQHMNP--------------KISDFGMARMFGGDELQGNTKRI 664
+L L + + +D + P K++DFG+A G+ Q
Sbjct: 129 QILEAVLHCHQMGVVHRD--LKPENLLLASKLKGAAVKLADFGLAIEVEGE--QQAWFGF 184
Query: 665 VGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEIL 698
GT GY+SPE + + D+++ GV++ +L
Sbjct: 185 AGTPGYLSPEVLRKDPYGKPVDLWACGVILYILL 218
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 82/201 (40%), Gaps = 37/201 (18%)
Query: 533 LGEGGFGPVYK-GRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCI 591
LG+G FG K G+ + +K L + + F E+ ++ L+H N+++ +G
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLY 77
Query: 592 EQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQD--------------- 636
+ I EY+ +L + ++ W RV IA
Sbjct: 78 KDKRLNFITEYIKGGTLRGIIKSMDSQY--PWSQRVSFAKDIASGMAYLHSMNIIHRDLN 135
Query: 637 -------QHMNPKISDFGMARMFGGDELQGNTKR------------IVGTYGYMSPEYAL 677
++ N ++DFG+AR+ ++ Q R +VG +M+PE
Sbjct: 136 SHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMIN 195
Query: 678 EGVFSVKSDVFSFGVLMLEIL 698
+ K DVFSFG+++ EI+
Sbjct: 196 GRSYDEKVDVFSFGIVLCEII 216
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 91/213 (42%), Gaps = 29/213 (13%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQ----EVAVKRLSNQSGQGLKE-FKNEMMLIAKLQ 579
E + +GEG FG V++G ++ + VA+K N + ++E F E + + +
Sbjct: 7 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 66
Query: 580 HRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFL------FDPTKKHLLGWQLRVRII--- 630
H ++V+L+G I + +I E L FL D L +QL +
Sbjct: 67 HPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE 125
Query: 631 -------DGIAQDQHMNP----KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEG 679
D A++ ++ K+ DFG++R + D + +M+PE
Sbjct: 126 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFR 184
Query: 680 VFSVKSDVFSFGVLMLEIL--SSKKNTGVYNTD 710
F+ SDV+ FGV M EIL K GV N D
Sbjct: 185 RFTSASDVWMFGVCMWEILMHGVKPFQGVKNND 217
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 98/223 (43%), Gaps = 48/223 (21%)
Query: 518 ASVTAATENFSIQS--------KLGEGGFGPVY------KGRLLNGQEVAVKRLSNQSGQ 563
+ V TEN QS K+GEG FG GR +E+ + R+S++ +
Sbjct: 9 SGVDLGTENLYFQSMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKERE 68
Query: 564 GLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEY--------MVNKSLDVFLFDP 615
E + E+ ++A ++H N+V+ E G ++ +Y +N V
Sbjct: 69 ---ESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLF--- 122
Query: 616 TKKHLLGWQLRV----------RIIDGIAQDQHM------NPKISDFGMARMFGGD-ELQ 658
+ +L W +++ +I+ + Q++ ++ DFG+AR+ EL
Sbjct: 123 QEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVEL- 181
Query: 659 GNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSK 701
+ +GT Y+SPE ++ KSD+++ G ++ E+ + K
Sbjct: 182 --ARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLK 222
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 85/200 (42%), Gaps = 27/200 (13%)
Query: 525 ENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFK-----NEMMLIAKL 578
E+F LGEG F V R L +E A+K L + +KE K E ++++L
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRL 89
Query: 579 QHRNLVRLL------------------GCCIEQGEKILIYEYMVNKSLDVFLFDPTKK-H 619
H V+L GC ++ KI ++ + + + H
Sbjct: 90 DHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLH 149
Query: 620 LLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEG 679
G R + I ++ M+ +I+DFG A++ + Q VGT Y+SPE E
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEK 209
Query: 680 VFSVKSDVFSFGVLMLEILS 699
S SD+++ G ++ ++++
Sbjct: 210 SASKSSDLWALGCIIYQLVA 229
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 109/273 (39%), Gaps = 52/273 (19%)
Query: 525 ENFSIQSKLGEGGFGPVYKGR--LLNGQ--EVAVKRLSNQ---SGQGLKEFKNEMMLIAK 577
++ + KLG+G FG V +G +G+ VAVK L + + +F E+ +
Sbjct: 12 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 71
Query: 578 LQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKH----LLGWQLR--VRIID 631
L HRNL+RL G + K++ + L D +KH LLG R V++ +
Sbjct: 72 LDHRNLIRLYGVVLTPPMKMVTELAPLGS-----LLDRLRKHQGHFLLGTLSRYAVQVAE 126
Query: 632 GIAQDQ-----HMN-------------PKISDFGMARMF--GGDELQGNTKRIVGTYGYM 671
G+ + H + KI DFG+ R D R V + +
Sbjct: 127 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV-PFAWC 185
Query: 672 SPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELM 731
+PE FS SD + FGV + E+ + Y + + L + L K D+ E
Sbjct: 186 APESLKTRTFSHASDTWMFGVTLWEMFT-------YGQEPWIGLNGSQILHKIDKEGER- 237
Query: 732 DPVLQNEVSLPMLVRYINVALLCVQENAEDRPT 764
L P + NV + C EDRPT
Sbjct: 238 ---LPRPEDCPQDI--YNVMVQCWAHKPEDRPT 265
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 87/201 (43%), Gaps = 35/201 (17%)
Query: 526 NFSIQSKLGEGGFGPVYKG-RLLNGQEVAVKRLSNQSGQGLK---EFKNEMMLIAKLQHR 581
++ + LG G FG V G L G +VAVK L+ Q + L + K E+ + +H
Sbjct: 12 HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHP 71
Query: 582 NLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRII----------- 630
++++L + ++ EY+ L FD KH ++ R +
Sbjct: 72 HIIKLYQVISTPTDFFMVMEYVSGGEL----FDYICKHGRVEEMEARRLFQQILSAVDYC 127
Query: 631 ------------DGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALE 678
+ + D HMN KI+DFG++ M E ++ G+ Y +PE
Sbjct: 128 HRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDS---CGSPNYAAPEVISG 184
Query: 679 GVFS-VKSDVFSFGVLMLEIL 698
+++ + D++S GV++ +L
Sbjct: 185 RLYAGPEVDIWSCGVILYALL 205
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 93/194 (47%), Gaps = 24/194 (12%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSN--QSGQGLKEFKNEMMLIAKLQHRN 582
E F+ K+G+G FG V+KG Q+V ++ + ++ +++ + E+ ++++
Sbjct: 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 81
Query: 583 LVRLLGCCIEQGEKILIYEYMVNKS-LDVFLFDPTKKHLLGWQLRVRIIDG--------- 632
+ + G ++ + +I EY+ S LD+ P + + LR I+ G
Sbjct: 82 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILR-EILKGLDYLHSEKK 140
Query: 633 IAQD---------QHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSV 683
I +D +H K++DFG+A +++ N VGT +M+PE + +
Sbjct: 141 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNX--FVGTPFWMAPEVIKQSAYDS 198
Query: 684 KSDVFSFGVLMLEI 697
K+D++S G+ +E+
Sbjct: 199 KADIWSLGITAIEL 212
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 98/216 (45%), Gaps = 39/216 (18%)
Query: 521 TAATENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVK--RLSNQSGQGLK---EFKNEMML 574
+ AT + +++G G +G VYK R +G VA+K R+ N G G E+ L
Sbjct: 5 SMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVAL 64
Query: 575 IAKLQ---HRNLVRLLGCCI-----EQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLR 626
+ +L+ H N+VRL+ C + + L++E+ V++ L +L L ++
Sbjct: 65 LRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEH-VDQDLRTYLDKAPPPGLPAETIK 123
Query: 627 ------VRIIDGIAQD----QHMNP-----------KISDFGMARMFGGDELQGNTKRIV 665
+R +D + + + + P K++DFG+AR++ Q +V
Sbjct: 124 DLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYS---YQMALTPVV 180
Query: 666 GTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSK 701
T Y +PE L+ ++ D++S G + E+ K
Sbjct: 181 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 216
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 95/222 (42%), Gaps = 36/222 (16%)
Query: 523 ATENFSIQSK-------LGEGGFGPVYKGRLLN----GQEVAVKRLSNQSGQGLKE-FKN 570
+T ++ IQ + +GEG FG V++G ++ VA+K N + ++E F
Sbjct: 381 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 440
Query: 571 EMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFL------FDPTKKHLLGWQ 624
E + + + H ++V+L+G I + +I E L FL D L +Q
Sbjct: 441 EALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQ 499
Query: 625 LRVRII----------DGIAQDQHMNP----KISDFGMARMFGGDELQGNTKRIVGTYGY 670
L + D A++ ++ K+ DFG++R + D + +
Sbjct: 500 LSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKW 558
Query: 671 MSPEYALEGVFSVKSDVFSFGVLMLEIL--SSKKNTGVYNTD 710
M+PE F+ SDV+ FGV M EIL K GV N D
Sbjct: 559 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND 600
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 94/194 (48%), Gaps = 24/194 (12%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSN--QSGQGLKEFKNEMMLIAKLQHRN 582
E F+ ++G+G FG V+KG Q+V ++ + ++ +++ + E+ ++++
Sbjct: 23 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSY 82
Query: 583 LVRLLGCCIEQGEKILIYEYMVNKS-LDVFLFDPTKKHLLGWQLRVRIIDG--------- 632
+ + G ++ + +I EY+ S LD+ P + + L+ I+ G
Sbjct: 83 VTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLK-EILKGLDYLHSEKK 141
Query: 633 IAQD---------QHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSV 683
I +D + + K++DFG+A +++ NT VGT +M+PE + +
Sbjct: 142 IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNT--FVGTPFWMAPEVIQQSAYDS 199
Query: 684 KSDVFSFGVLMLEI 697
K+D++S G+ +E+
Sbjct: 200 KADIWSLGITAIEL 213
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 93/194 (47%), Gaps = 24/194 (12%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSN--QSGQGLKEFKNEMMLIAKLQHRN 582
E F+ K+G+G FG V+KG Q+V ++ + ++ +++ + E+ ++++
Sbjct: 7 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 66
Query: 583 LVRLLGCCIEQGEKILIYEYMVNKS-LDVFLFDPTKKHLLGWQLRVRIIDG--------- 632
+ + G ++ + +I EY+ S LD+ P + + LR I+ G
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILR-EILKGLDYLHSEKK 125
Query: 633 IAQD---------QHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSV 683
I +D +H K++DFG+A +++ N VGT +M+PE + +
Sbjct: 126 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNX--FVGTPFWMAPEVIKQSAYDS 183
Query: 684 KSDVFSFGVLMLEI 697
K+D++S G+ +E+
Sbjct: 184 KADIWSLGITAIEL 197
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 89/202 (44%), Gaps = 31/202 (15%)
Query: 524 TENFSIQSKLGEGGFGPVYKG-RLLNGQEVAVKRLSNQ--SGQGLKEFKNEMMLIAKLQH 580
T+ + + +G+G F V + +L G E A K ++ + S + ++ + E + L+H
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 581 RNLVRLLGCCIEQGEKILIYEYMVNKSL--DV----FLFDPTKKH----LLGWQLRVRII 630
N+VRL E+G L+++ + L D+ + + H +L L +
Sbjct: 63 SNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQM 122
Query: 631 DGIAQDQHMNP--------------KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYA 676
+ +D + P K++DFG+A GD Q GT GY+SPE
Sbjct: 123 GVVHRD--LKPENLLLASKCKGAAVKLADFGLAIEVQGD--QQAWFGFAGTPGYLSPEVL 178
Query: 677 LEGVFSVKSDVFSFGVLMLEIL 698
+ + D+++ GV++ +L
Sbjct: 179 RKEAYGKPVDIWACGVILYILL 200
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 95/222 (42%), Gaps = 36/222 (16%)
Query: 523 ATENFSIQSK-------LGEGGFGPVYKGRLLN----GQEVAVKRLSNQSGQGLKE-FKN 570
+T ++ IQ + +GEG FG V++G ++ VA+K N + ++E F
Sbjct: 381 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 440
Query: 571 EMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFL------FDPTKKHLLGWQ 624
E + + + H ++V+L+G I + +I E L FL D L +Q
Sbjct: 441 EALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQ 499
Query: 625 LRVRII----------DGIAQDQHMNP----KISDFGMARMFGGDELQGNTKRIVGTYGY 670
L + D A++ ++ K+ DFG++R + D + +
Sbjct: 500 LSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKW 558
Query: 671 MSPEYALEGVFSVKSDVFSFGVLMLEIL--SSKKNTGVYNTD 710
M+PE F+ SDV+ FGV M EIL K GV N D
Sbjct: 559 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND 600
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 86/201 (42%), Gaps = 35/201 (17%)
Query: 526 NFSIQSKLGEGGFGPVYKG-RLLNGQEVAVKRLSNQSGQGLK---EFKNEMMLIAKLQHR 581
++ + LG G FG V G L G +VAVK L+ Q + L + K E+ + +H
Sbjct: 12 HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHP 71
Query: 582 NLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRII----------- 630
++++L + ++ EY+ L FD KH ++ R +
Sbjct: 72 HIIKLYQVISTPTDFFMVMEYVSGGEL----FDYICKHGRVEEMEARRLFQQILSAVDYC 127
Query: 631 ------------DGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALE 678
+ + D HMN KI+DFG++ M E + G+ Y +PE
Sbjct: 128 HRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTS---CGSPNYAAPEVISG 184
Query: 679 GVFS-VKSDVFSFGVLMLEIL 698
+++ + D++S GV++ +L
Sbjct: 185 RLYAGPEVDIWSCGVILYALL 205
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 98/225 (43%), Gaps = 58/225 (25%)
Query: 526 NFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
+F + LG+G FG V K R L+ + A+K++ + + L +E+ML+A L H+ +V
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVMLLASLNHQYVV 65
Query: 585 RLLGCCIEQGEKI-------------LIYEYMVNKSLDVFLFDPTKKHLLG------WQL 625
R +E+ + + EY N++L +D L W+L
Sbjct: 66 RYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTL----YDLIHSENLNQQRDEYWRL 121
Query: 626 RVRIIDGIAQ------------------DQHMNPKISDFGMAR---------MFGGDELQ 658
+I++ ++ D+ N KI DFG+A+ L
Sbjct: 122 FRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLP 181
Query: 659 GNTKRI---VGTYGYMSPEYALEGV--FSVKSDVFSFGVLMLEIL 698
G++ + +GT Y++ E L+G ++ K D++S G++ E++
Sbjct: 182 GSSDNLTSAIGTAMYVATE-VLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 109/273 (39%), Gaps = 52/273 (19%)
Query: 525 ENFSIQSKLGEGGFGPVYKGR--LLNGQ--EVAVKRLSNQ---SGQGLKEFKNEMMLIAK 577
++ + KLG+G FG V +G +G+ VAVK L + + +F E+ +
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67
Query: 578 LQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKH----LLGWQLR--VRIID 631
L HRNL+RL G + K++ + L D +KH LLG R V++ +
Sbjct: 68 LDHRNLIRLYGVVLTPPMKMVTELAPLGS-----LLDRLRKHQGHFLLGTLSRYAVQVAE 122
Query: 632 GIAQDQ-----HMN-------------PKISDFGMARMF--GGDELQGNTKRIVGTYGYM 671
G+ + H + KI DFG+ R D R V + +
Sbjct: 123 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKV-PFAWC 181
Query: 672 SPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELM 731
+PE FS SD + FGV + E+ + Y + + L + L K D+ E
Sbjct: 182 APESLKTRTFSHASDTWMFGVTLWEMFT-------YGQEPWIGLNGSQILHKIDKEGE-- 232
Query: 732 DPVLQNEVSLPMLVRYINVALLCVQENAEDRPT 764
L P + NV + C EDRPT
Sbjct: 233 --RLPRPEDCPQDI--YNVMVQCWAHKPEDRPT 261
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 87/205 (42%), Gaps = 37/205 (18%)
Query: 527 FSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKL-QHRNLVR 585
F + +G G +G VYKGR + ++A ++ + +G +E K E+ ++ K HRN+
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIAT 85
Query: 586 LLGCCIEQG------EKILIYEYMVNKSLDVFLFDPTK--------------------KH 619
G I++ + L+ E+ S+ L TK H
Sbjct: 86 YYGAFIKKNPPGMDDQLWLVMEFCGAGSV-TDLIKNTKGNTLKEEWIAYICREILRGLSH 144
Query: 620 LLGWQLRVRIIDG--IAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYAL 677
L ++ R I G + ++ K+ DFG++ D G +GT +M+PE
Sbjct: 145 LHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL--DRTVGRRNTFIGTPYWMAPEVIA 202
Query: 678 -----EGVFSVKSDVFSFGVLMLEI 697
+ + KSD++S G+ +E+
Sbjct: 203 CDENPDATYDFKSDLWSLGITAIEM 227
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 109/273 (39%), Gaps = 52/273 (19%)
Query: 525 ENFSIQSKLGEGGFGPVYKGR--LLNGQ--EVAVKRLSNQ---SGQGLKEFKNEMMLIAK 577
++ + KLG+G FG V +G +G+ VAVK L + + +F E+ +
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67
Query: 578 LQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKH----LLGWQLR--VRIID 631
L HRNL+RL G + K++ + L D +KH LLG R V++ +
Sbjct: 68 LDHRNLIRLYGVVLTPPMKMVTELAPLGS-----LLDRLRKHQGHFLLGTLSRYAVQVAE 122
Query: 632 GIAQDQ-----HMN-------------PKISDFGMARMF--GGDELQGNTKRIVGTYGYM 671
G+ + H + KI DFG+ R D R V + +
Sbjct: 123 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV-PFAWC 181
Query: 672 SPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELM 731
+PE FS SD + FGV + E+ + Y + + L + L K D+ E
Sbjct: 182 APESLKTRTFSHASDTWMFGVTLWEMFT-------YGQEPWIGLNGSQILHKIDKEGE-- 232
Query: 732 DPVLQNEVSLPMLVRYINVALLCVQENAEDRPT 764
L P + NV + C EDRPT
Sbjct: 233 --RLPRPEDCPQDI--YNVMVQCWAHKPEDRPT 261
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 93/211 (44%), Gaps = 34/211 (16%)
Query: 519 SVTAATE------NFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRL--SNQSGQGLKEFK 569
S+T+AT+ N+ +Q +G+G F V R +L G+EVAVK + + + L++
Sbjct: 3 SITSATDEQPHIGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLF 62
Query: 570 NEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRI 629
E+ ++ L H N+V+L + L+ EY + +L + + + R
Sbjct: 63 REVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQ 122
Query: 630 IDGIAQ-------------------DQHMNPKISDFGMARMFG-GDELQGNTKRIVGTYG 669
I Q D MN KI+DFG + F G++L G+
Sbjct: 123 IVSAVQYCHQKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLD----TFCGSPP 178
Query: 670 YMSPE-YALEGVFSVKSDVFSFGVLMLEILS 699
Y +PE + + + DV+S GV++ ++S
Sbjct: 179 YAAPELFQGKKYDGPEVDVWSLGVILYTLVS 209
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 82/189 (43%), Gaps = 21/189 (11%)
Query: 532 KLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCC 590
K+GEG G V R + G++VAVK + + Q + NE++++ QH N+V +
Sbjct: 52 KIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSY 111
Query: 591 IEQGEKILIYEYMVNKSL------------------DVFLFDPTKKHLLGWQLRVRIIDG 632
+ E ++ E++ +L + L H G R D
Sbjct: 112 LVGEELWVLMEFLQGGALTDIVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDS 171
Query: 633 IAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGV 692
I K+SDFG D K +VGT +M+PE +++ + D++S G+
Sbjct: 172 ILLTLDGRVKLSDFGFCAQISKD--VPKRKXLVGTPYWMAPEVISRSLYATEVDIWSLGI 229
Query: 693 LMLEILSSK 701
+++E++ +
Sbjct: 230 MVIEMVDGE 238
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 91/193 (47%), Gaps = 30/193 (15%)
Query: 533 LGEGGFGPVYKGRLLN-GQEVAVKRLS----NQSGQGL-KEFKNEMMLIAKLQHRNLVRL 586
LGEG F VYK R N Q VA+K++ +++ G+ + E+ L+ +L H N++ L
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGL 77
Query: 587 LGCCIEQGEKILIYEYMVNKSLDVFLFDP----TKKHLLGWQL----------------R 626
L + L++++M L+V + D T H+ + L R
Sbjct: 78 LDAFGHKSNISLVFDFM-ETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHR 136
Query: 627 VRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEG-VFSVKS 685
+ + D++ K++DFG+A+ FG + ++V T Y +PE ++ V
Sbjct: 137 DLKPNNLLLDENGVLKLADFGLAKSFGSPN-RAYXHQVV-TRWYRAPELLFGARMYGVGV 194
Query: 686 DVFSFGVLMLEIL 698
D+++ G ++ E+L
Sbjct: 195 DMWAVGCILAELL 207
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 113/285 (39%), Gaps = 53/285 (18%)
Query: 513 PLFSFASVTAATENFSIQSKLGEGGFGPVYKGR--LLNGQ--EVAVKRLSNQ---SGQGL 565
PL S + ++ + KLG+G FG V +G +G+ VAVK L + +
Sbjct: 7 PLQSLTCLIG-EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAM 65
Query: 566 KEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKH----LL 621
+F E+ + L HRNL+RL G + K++ + L D +KH LL
Sbjct: 66 DDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGS-----LLDRLRKHQGHFLL 120
Query: 622 GWQLR--VRIIDGIAQDQ-----HMN-------------PKISDFGMARMF--GGDELQG 659
G R V++ +G+ + H + KI DFG+ R D
Sbjct: 121 GTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVM 180
Query: 660 NTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAW 719
R V + + +PE FS SD + FGV + E+ + Y + + L +
Sbjct: 181 QEHRKV-PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT-------YGQEPWIGLNGSQ 232
Query: 720 SLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPT 764
L K D+ E L P + NV + C EDRPT
Sbjct: 233 ILHKIDKEGE----RLPRPEDCPQDI--YNVMVQCWAHKPEDRPT 271
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 109/273 (39%), Gaps = 52/273 (19%)
Query: 525 ENFSIQSKLGEGGFGPVYKGR--LLNGQ--EVAVKRLSNQ---SGQGLKEFKNEMMLIAK 577
++ + KLG+G FG V +G +G+ VAVK L + + +F E+ +
Sbjct: 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 77
Query: 578 LQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKH----LLGWQLR--VRIID 631
L HRNL+RL G + K++ + L D +KH LLG R V++ +
Sbjct: 78 LDHRNLIRLYGVVLTPPMKMVTELAPLGS-----LLDRLRKHQGHFLLGTLSRYAVQVAE 132
Query: 632 GIAQDQ-----HMN-------------PKISDFGMARMF--GGDELQGNTKRIVGTYGYM 671
G+ + H + KI DFG+ R D R V + +
Sbjct: 133 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV-PFAWC 191
Query: 672 SPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELM 731
+PE FS SD + FGV + E+ + Y + + L + L K D+ E
Sbjct: 192 APESLKTRTFSHASDTWMFGVTLWEMFT-------YGQEPWIGLNGSQILHKIDKEGE-- 242
Query: 732 DPVLQNEVSLPMLVRYINVALLCVQENAEDRPT 764
L P + NV + C EDRPT
Sbjct: 243 --RLPRPEDCPQDI--YNVMVQCWAHKPEDRPT 271
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 109/273 (39%), Gaps = 52/273 (19%)
Query: 525 ENFSIQSKLGEGGFGPVYKGR--LLNGQ--EVAVKRLSNQ---SGQGLKEFKNEMMLIAK 577
++ + KLG+G FG V +G +G+ VAVK L + + +F E+ +
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67
Query: 578 LQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKH----LLGWQLR--VRIID 631
L HRNL+RL G + K++ + L D +KH LLG R V++ +
Sbjct: 68 LDHRNLIRLYGVVLTPPMKMVTELAPLGS-----LLDRLRKHQGHFLLGTLSRYAVQVAE 122
Query: 632 GIAQDQ-----HMN-------------PKISDFGMARMF--GGDELQGNTKRIVGTYGYM 671
G+ + H + KI DFG+ R D R V + +
Sbjct: 123 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV-PFAWC 181
Query: 672 SPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELM 731
+PE FS SD + FGV + E+ + Y + + L + L K D+ E
Sbjct: 182 APESLKTRTFSHASDTWMFGVTLWEMFT-------YGQEPWIGLNGSQILHKIDKEGE-- 232
Query: 732 DPVLQNEVSLPMLVRYINVALLCVQENAEDRPT 764
L P + NV + C EDRPT
Sbjct: 233 --RLPRPEDCPQDI--YNVMVQCWAHKPEDRPT 261
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 91/201 (45%), Gaps = 29/201 (14%)
Query: 524 TENFSIQSKLGEGGFGPVYK-GRLLNGQEVAVKRLSNQ--SGQGLKEFKNEMMLIAKLQH 580
T+ + + +LG+G F V + ++ GQE A K ++ + S + ++ + E + L+H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 581 RNLVRLLGCCIEQGEKILIYEYMVNKSL--DV----FLFDPTKKHLLGWQLRVR---IID 631
N+VRL E+G L+++ + L D+ + + H + L ++
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLN 122
Query: 632 GIAQDQHMNP--------------KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYAL 677
GI + + P K++DFG+A GD Q GT GY+SPE
Sbjct: 123 GIVH-RDLKPENLLLASKSKGAAVKLADFGLAIEVQGD--QQAWFGFAGTPGYLSPEVLR 179
Query: 678 EGVFSVKSDVFSFGVLMLEIL 698
+ + D+++ GV++ +L
Sbjct: 180 KDPYGKPVDMWACGVILYILL 200
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 109/273 (39%), Gaps = 52/273 (19%)
Query: 525 ENFSIQSKLGEGGFGPVYKGR--LLNGQ--EVAVKRLSNQ---SGQGLKEFKNEMMLIAK 577
++ + KLG+G FG V +G +G+ VAVK L + + +F E+ +
Sbjct: 12 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 71
Query: 578 LQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKH----LLGWQLR--VRIID 631
L HRNL+RL G + K++ + L D +KH LLG R V++ +
Sbjct: 72 LDHRNLIRLYGVVLTPPMKMVTELAPLGS-----LLDRLRKHQGHFLLGTLSRYAVQVAE 126
Query: 632 GIAQDQ-----HMN-------------PKISDFGMARMF--GGDELQGNTKRIVGTYGYM 671
G+ + H + KI DFG+ R D R V + +
Sbjct: 127 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV-PFAWC 185
Query: 672 SPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELM 731
+PE FS SD + FGV + E+ + Y + + L + L K D+ E
Sbjct: 186 APESLKTRTFSHASDTWMFGVTLWEMFT-------YGQEPWIGLNGSQILHKIDKEGE-- 236
Query: 732 DPVLQNEVSLPMLVRYINVALLCVQENAEDRPT 764
L P + NV + C EDRPT
Sbjct: 237 --RLPRPEDCPQDI--YNVMVQCWAHKPEDRPT 265
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 91/201 (45%), Gaps = 29/201 (14%)
Query: 524 TENFSIQSKLGEGGFGPVYK-GRLLNGQEVAVKRLSNQ--SGQGLKEFKNEMMLIAKLQH 580
T+ + + +LG+G F V + ++ GQE A K ++ + S + ++ + E + L+H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 581 RNLVRLLGCCIEQGEKILIYEYMVNKSL--DV----FLFDPTKKHLLGWQLRVR---IID 631
N+VRL E+G L+++ + L D+ + + H + L ++
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLN 122
Query: 632 GIAQDQHMNP--------------KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYAL 677
GI + + P K++DFG+A GD Q GT GY+SPE
Sbjct: 123 GIVH-RDLKPENLLLASKSKGAAVKLADFGLAIEVQGD--QQAWFGFAGTPGYLSPEVLR 179
Query: 678 EGVFSVKSDVFSFGVLMLEIL 698
+ + D+++ GV++ +L
Sbjct: 180 KDPYGKPVDMWACGVILYILL 200
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 83/211 (39%), Gaps = 59/211 (27%)
Query: 533 LGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGC-- 589
+G GGFG V+K + ++G+ +KR+ + + +E K +AKL H N+V GC
Sbjct: 19 IGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVK----ALAKLDHVNIVHYNGCWD 74
Query: 590 -------------------CI---------------------EQGEKILIYEYM--VNKS 607
C+ E+ +K+L E + K
Sbjct: 75 GFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKG 134
Query: 608 LDVFLFDPTKKHLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGT 667
+D K L+ L+ I + Q KI DFG+ D G R GT
Sbjct: 135 VDYI----HSKKLINRDLKPSNIFLVDTKQ---VKIGDFGLVTSLKND---GKRXRSKGT 184
Query: 668 YGYMSPEYALEGVFSVKSDVFSFGVLMLEIL 698
YMSPE + + D+++ G+++ E+L
Sbjct: 185 LRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 89/201 (44%), Gaps = 29/201 (14%)
Query: 525 ENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFK-----NEMMLIAKL 578
E+F LGEG F V R L +E A+K L + +KE K E ++++L
Sbjct: 7 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRL 64
Query: 579 QHRNLVRLLGCCIEQGEKILI-YEYMVNKSLDVFL-----FDPT------------KKHL 620
H V+L + EK+ Y N L ++ FD T ++L
Sbjct: 65 DHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 123
Query: 621 LGWQLRVRII--DGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALE 678
G + R + + I ++ M+ +I+DFG A++ + Q VGT Y+SPE E
Sbjct: 124 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 183
Query: 679 GVFSVKSDVFSFGVLMLEILS 699
SD+++ G ++ ++++
Sbjct: 184 KSACKSSDLWALGCIIYQLVA 204
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 89/201 (44%), Gaps = 29/201 (14%)
Query: 525 ENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFK-----NEMMLIAKL 578
E+F LGEG F V R L +E A+K L + +KE K E ++++L
Sbjct: 10 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRL 67
Query: 579 QHRNLVRLLGCCIEQGEKILI-YEYMVNKSLDVFL-----FDPT------------KKHL 620
H V+L + EK+ Y N L ++ FD T ++L
Sbjct: 68 DHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 126
Query: 621 LGWQLRVRII--DGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALE 678
G + R + + I ++ M+ +I+DFG A++ + Q VGT Y+SPE E
Sbjct: 127 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 186
Query: 679 GVFSVKSDVFSFGVLMLEILS 699
SD+++ G ++ ++++
Sbjct: 187 KSACKSSDLWALGCIIYQLVA 207
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 89/201 (44%), Gaps = 29/201 (14%)
Query: 525 ENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFK-----NEMMLIAKL 578
E+F LGEG F V R L +E A+K L + +KE K E ++++L
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRL 87
Query: 579 QHRNLVRLLGCCIEQGEKILI-YEYMVNKSLDVFL-----FDPT------------KKHL 620
H V+L + EK+ Y N L ++ FD T ++L
Sbjct: 88 DHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 146
Query: 621 LGWQLRVRII--DGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALE 678
G + R + + I ++ M+ +I+DFG A++ + Q VGT Y+SPE E
Sbjct: 147 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 206
Query: 679 GVFSVKSDVFSFGVLMLEILS 699
SD+++ G ++ ++++
Sbjct: 207 KSACKSSDLWALGCIIYQLVA 227
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 89/201 (44%), Gaps = 29/201 (14%)
Query: 525 ENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFK-----NEMMLIAKL 578
E+F LGEG F V R L +E A+K L + +KE K E ++++L
Sbjct: 9 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRL 66
Query: 579 QHRNLVRLLGCCIEQGEKILI-YEYMVNKSLDVFL-----FDPT------------KKHL 620
H V+L + EK+ Y N L ++ FD T ++L
Sbjct: 67 DHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 125
Query: 621 LGWQLRVRII--DGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALE 678
G + R + + I ++ M+ +I+DFG A++ + Q VGT Y+SPE E
Sbjct: 126 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 185
Query: 679 GVFSVKSDVFSFGVLMLEILS 699
SD+++ G ++ ++++
Sbjct: 186 KSACKSSDLWALGCIIYQLVA 206
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 89/201 (44%), Gaps = 29/201 (14%)
Query: 525 ENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFK-----NEMMLIAKL 578
E+F LGEG F V R L +E A+K L + +KE K E ++++L
Sbjct: 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRL 65
Query: 579 QHRNLVRLLGCCIEQGEKILI-YEYMVNKSLDVFL-----FDPT------------KKHL 620
H V+L + EK+ Y N L ++ FD T ++L
Sbjct: 66 DHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 124
Query: 621 LGWQLRVRII--DGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALE 678
G + R + + I ++ M+ +I+DFG A++ + Q VGT Y+SPE E
Sbjct: 125 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 184
Query: 679 GVFSVKSDVFSFGVLMLEILS 699
SD+++ G ++ ++++
Sbjct: 185 KSACKSSDLWALGCIIYQLVA 205
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 89/201 (44%), Gaps = 29/201 (14%)
Query: 525 ENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFK-----NEMMLIAKL 578
E+F LGEG F V R L +E A+K L + +KE K E ++++L
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRL 89
Query: 579 QHRNLVRLLGCCIEQGEKILI-YEYMVNKSLDVFL-----FDPT------------KKHL 620
H V+L + EK+ Y N L ++ FD T ++L
Sbjct: 90 DHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 148
Query: 621 LGWQLRVRII--DGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALE 678
G + R + + I ++ M+ +I+DFG A++ + Q VGT Y+SPE E
Sbjct: 149 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 679 GVFSVKSDVFSFGVLMLEILS 699
SD+++ G ++ ++++
Sbjct: 209 KSACKSSDLWALGCIIYQLVA 229
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 89/201 (44%), Gaps = 29/201 (14%)
Query: 525 ENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFK-----NEMMLIAKL 578
E+F LGEG F V R L +E A+K L + +KE K E ++++L
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRL 90
Query: 579 QHRNLVRLLGCCIEQGEKILI-YEYMVNKSLDVFL-----FDPT------------KKHL 620
H V+L + EK+ Y N L ++ FD T ++L
Sbjct: 91 DHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 149
Query: 621 LGWQLRVRII--DGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALE 678
G + R + + I ++ M+ +I+DFG A++ + Q VGT Y+SPE E
Sbjct: 150 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTE 209
Query: 679 GVFSVKSDVFSFGVLMLEILS 699
SD+++ G ++ ++++
Sbjct: 210 KSACKSSDLWALGCIIYQLVA 230
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 89/201 (44%), Gaps = 29/201 (14%)
Query: 525 ENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFK-----NEMMLIAKL 578
E+F LGEG F V R L +E A+K L + +KE K E ++++L
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRL 87
Query: 579 QHRNLVRLLGCCIEQGEKILI-YEYMVNKSLDVFL-----FDPT------------KKHL 620
H V+L + EK+ Y N L ++ FD T ++L
Sbjct: 88 DHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 146
Query: 621 LGWQLRVRII--DGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALE 678
G + R + + I ++ M+ +I+DFG A++ + Q VGT Y+SPE E
Sbjct: 147 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 206
Query: 679 GVFSVKSDVFSFGVLMLEILS 699
SD+++ G ++ ++++
Sbjct: 207 KSACKSSDLWALGCIIYQLVA 227
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 89/201 (44%), Gaps = 29/201 (14%)
Query: 525 ENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFK-----NEMMLIAKL 578
E+F LGEG F V R L +E A+K L + +KE K E ++++L
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRL 90
Query: 579 QHRNLVRLLGCCIEQGEKILI-YEYMVNKSLDVFL-----FDPT------------KKHL 620
H V+L + EK+ Y N L ++ FD T ++L
Sbjct: 91 DHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 149
Query: 621 LGWQLRVRII--DGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALE 678
G + R + + I ++ M+ +I+DFG A++ + Q VGT Y+SPE E
Sbjct: 150 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 209
Query: 679 GVFSVKSDVFSFGVLMLEILS 699
SD+++ G ++ ++++
Sbjct: 210 KSACKSSDLWALGCIIYQLVA 230
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 89/201 (44%), Gaps = 29/201 (14%)
Query: 525 ENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFK-----NEMMLIAKL 578
E+F LGEG F V R L +E A+K L + +KE K E ++++L
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRL 87
Query: 579 QHRNLVRLLGCCIEQGEKILI-YEYMVNKSLDVFL-----FDPT------------KKHL 620
H V+L + EK+ Y N L ++ FD T ++L
Sbjct: 88 DHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 146
Query: 621 LGWQLRVRII--DGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALE 678
G + R + + I ++ M+ +I+DFG A++ + Q VGT Y+SPE E
Sbjct: 147 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTE 206
Query: 679 GVFSVKSDVFSFGVLMLEILS 699
SD+++ G ++ ++++
Sbjct: 207 KSACKSSDLWALGCIIYQLVA 227
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 89/201 (44%), Gaps = 29/201 (14%)
Query: 525 ENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFK-----NEMMLIAKL 578
E+F LGEG F V R L +E A+K L + +KE K E ++++L
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRL 71
Query: 579 QHRNLVRLLGCCIEQGEKILI-YEYMVNKSLDVFL-----FDPT------------KKHL 620
H V+L + EK+ Y N L ++ FD T ++L
Sbjct: 72 DHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 130
Query: 621 LGWQLRVRII--DGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALE 678
G + R + + I ++ M+ +I+DFG A++ + Q VGT Y+SPE E
Sbjct: 131 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 190
Query: 679 GVFSVKSDVFSFGVLMLEILS 699
SD+++ G ++ ++++
Sbjct: 191 KSACKSSDLWALGCIIYQLVA 211
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 89/201 (44%), Gaps = 29/201 (14%)
Query: 525 ENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFK-----NEMMLIAKL 578
E+F LGEG F V R L +E A+K L + +KE K E ++++L
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRL 89
Query: 579 QHRNLVRLLGCCIEQGEKILI-YEYMVNKSLDVFL-----FDPT------------KKHL 620
H V+L + EK+ Y N L ++ FD T ++L
Sbjct: 90 DHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 148
Query: 621 LGWQLRVRII--DGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALE 678
G + R + + I ++ M+ +I+DFG A++ + Q VGT Y+SPE E
Sbjct: 149 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 679 GVFSVKSDVFSFGVLMLEILS 699
SD+++ G ++ ++++
Sbjct: 209 KSACKSSDLWALGCIIYQLVA 229
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 89/201 (44%), Gaps = 29/201 (14%)
Query: 525 ENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFK-----NEMMLIAKL 578
E+F LGEG F V R L +E A+K L + +KE K E ++++L
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRL 89
Query: 579 QHRNLVRLLGCCIEQGEKILI-YEYMVNKSLDVFL-----FDPT------------KKHL 620
H V+L + EK+ Y N L ++ FD T ++L
Sbjct: 90 DHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 148
Query: 621 LGWQLRVRII--DGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALE 678
G + R + + I ++ M+ +I+DFG A++ + Q VGT Y+SPE E
Sbjct: 149 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 679 GVFSVKSDVFSFGVLMLEILS 699
SD+++ G ++ ++++
Sbjct: 209 KSACKSSDLWALGCIIYQLVA 229
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 89/201 (44%), Gaps = 29/201 (14%)
Query: 525 ENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFK-----NEMMLIAKL 578
E+F LGEG F V R L +E A+K L + +KE K E ++++L
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRL 89
Query: 579 QHRNLVRLLGCCIEQGEKILI-YEYMVNKSLDVFL-----FDPT------------KKHL 620
H V+L + EK+ Y N L ++ FD T ++L
Sbjct: 90 DHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 148
Query: 621 LGWQLRVRII--DGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALE 678
G + R + + I ++ M+ +I+DFG A++ + Q VGT Y+SPE E
Sbjct: 149 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 679 GVFSVKSDVFSFGVLMLEILS 699
SD+++ G ++ ++++
Sbjct: 209 KSAXKSSDLWALGCIIYQLVA 229
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 89/201 (44%), Gaps = 29/201 (14%)
Query: 525 ENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFK-----NEMMLIAKL 578
E+F LGEG F V R L +E A+K L + +KE K E ++++L
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRL 86
Query: 579 QHRNLVRLLGCCIEQGEKILI-YEYMVNKSLDVFL-----FDPT------------KKHL 620
H V+L + EK+ Y N L ++ FD T ++L
Sbjct: 87 DHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 145
Query: 621 LGWQLRVRII--DGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALE 678
G + R + + I ++ M+ +I+DFG A++ + Q VGT Y+SPE E
Sbjct: 146 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 205
Query: 679 GVFSVKSDVFSFGVLMLEILS 699
SD+++ G ++ ++++
Sbjct: 206 KSACKSSDLWALGCIIYQLVA 226
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 89/201 (44%), Gaps = 29/201 (14%)
Query: 525 ENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFK-----NEMMLIAKL 578
E+F LGEG F V R L +E A+K L + +KE K E ++++L
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRL 86
Query: 579 QHRNLVRLLGCCIEQGEKILI-YEYMVNKSLDVFL-----FDPT------------KKHL 620
H V+L + EK+ Y N L ++ FD T ++L
Sbjct: 87 DHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 145
Query: 621 LGWQLRVRII--DGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALE 678
G + R + + I ++ M+ +I+DFG A++ + Q VGT Y+SPE E
Sbjct: 146 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTE 205
Query: 679 GVFSVKSDVFSFGVLMLEILS 699
SD+++ G ++ ++++
Sbjct: 206 KSACKSSDLWALGCIIYQLVA 226
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 89/201 (44%), Gaps = 29/201 (14%)
Query: 525 ENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFK-----NEMMLIAKL 578
E+F LGEG F V R L +E A+K L + +KE K E ++++L
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRL 92
Query: 579 QHRNLVRLLGCCIEQGEKILI-YEYMVNKSLDVFL-----FDPT------------KKHL 620
H V+L + EK+ Y N L ++ FD T ++L
Sbjct: 93 DHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 151
Query: 621 LGWQLRVRII--DGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALE 678
G + R + + I ++ M+ +I+DFG A++ + Q VGT Y+SPE E
Sbjct: 152 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 211
Query: 679 GVFSVKSDVFSFGVLMLEILS 699
SD+++ G ++ ++++
Sbjct: 212 KSACKSSDLWALGCIIYQLVA 232
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 89/201 (44%), Gaps = 29/201 (14%)
Query: 525 ENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFK-----NEMMLIAKL 578
E+F LGEG F V R L +E A+K L + +KE K E ++++L
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRL 89
Query: 579 QHRNLVRLLGCCIEQGEKILI-YEYMVNKSLDVFL-----FDPT------------KKHL 620
H V+L + EK+ Y N L ++ FD T ++L
Sbjct: 90 DHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 148
Query: 621 LGWQLRVRII--DGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALE 678
G + R + + I ++ M+ +I+DFG A++ + Q VGT Y+SPE E
Sbjct: 149 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 679 GVFSVKSDVFSFGVLMLEILS 699
SD+++ G ++ ++++
Sbjct: 209 KSACKSSDLWALGCIIYQLVA 229
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 95/212 (44%), Gaps = 37/212 (17%)
Query: 517 FASVTAATENFSIQSKLGEGGFGPVYKG-RLLNGQEVAVKRLSNQ--SGQGLKEFKNEMM 573
A+ T T+++ + +LG+G F V + + QE A K ++ + S + ++ + E
Sbjct: 23 MATCTRFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREAR 82
Query: 574 LIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSL--DV----FLFDPTKKHLLGWQL-- 625
+ L+H N+VRL E+G L+++ + L D+ + + H + L
Sbjct: 83 ICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILES 142
Query: 626 --RVRIIDGIAQDQHMNP--------------KISDFGMARMFGGDELQGNTKR---IVG 666
+ D + +D + P K++DFG+A E+QG + G
Sbjct: 143 VNHIHQHDIVHRD--LKPENLLLASKCKGAAVKLADFGLA-----IEVQGEQQAWFGFAG 195
Query: 667 TYGYMSPEYALEGVFSVKSDVFSFGVLMLEIL 698
T GY+SPE + + D+++ GV++ +L
Sbjct: 196 TPGYLSPEVLRKDPYGKPVDIWACGVILYILL 227
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Query: 642 KISDFGMARMFG--GDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS 699
K+ DFG+AR G+ + T ++GT Y+SPE A +SDV+S G ++ E+L+
Sbjct: 156 KVVDFGIARAIADSGNSVX-QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT 214
Query: 700 SK 701
+
Sbjct: 215 GE 216
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 7/64 (10%)
Query: 642 KISDFGMARMFGGDELQGN----TKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEI 697
K+ DFG+AR GN T ++GT Y+SPE A +SDV+S G ++ E+
Sbjct: 156 KVMDFGIARAIAD---SGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEV 212
Query: 698 LSSK 701
L+ +
Sbjct: 213 LTGE 216
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 90/207 (43%), Gaps = 27/207 (13%)
Query: 518 ASVTAATENFSIQSKLGEGGFGPVYKGRLL----NGQEVAVKRLSNQSGQGLKEFKNEMM 573
S A +F + LG+G FG V+ R + +G A+K L + + + +M
Sbjct: 21 GSEKADPSHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKME 80
Query: 574 --LIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSL------DVFLFDPTKK------- 618
++A + H +V+L +G+ LI +++ L +V + K
Sbjct: 81 RDILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELA 140
Query: 619 ------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMS 672
H LG R + I D+ + K++DFG+++ E + + GT YM+
Sbjct: 141 LGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYS--FCGTVEYMA 198
Query: 673 PEYALEGVFSVKSDVFSFGVLMLEILS 699
PE S +D +S+GVLM E+L+
Sbjct: 199 PEVVNRQGHSHSADWWSYGVLMFEMLT 225
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 7/64 (10%)
Query: 642 KISDFGMARMFGGDELQGN----TKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEI 697
K+ DFG+AR GN T ++GT Y+SPE A +SDV+S G ++ E+
Sbjct: 156 KVMDFGIARAIAD---SGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEV 212
Query: 698 LSSK 701
L+ +
Sbjct: 213 LTGE 216
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Query: 642 KISDFGMARMFG--GDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS 699
K+ DFG+AR G+ + T ++GT Y+SPE A +SDV+S G ++ E+L+
Sbjct: 156 KVMDFGIARAIADSGNSVT-QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT 214
Query: 700 SK 701
+
Sbjct: 215 GE 216
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Query: 642 KISDFGMARMFG--GDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS 699
K+ DFG+AR G+ + T ++GT Y+SPE A +SDV+S G ++ E+L+
Sbjct: 156 KVMDFGIARAIADSGNSVT-QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT 214
Query: 700 SK 701
+
Sbjct: 215 GE 216
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 94/203 (46%), Gaps = 29/203 (14%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQE-VAVKRLS-NQSGQGLKEFK-NEMMLIAKLQHR 581
+ + K+GEG +G V+K + E VA+KR+ + +G+ E+ L+ +L+H+
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61
Query: 582 NLVRLLGCCIEQGEKILIYEYM----------VNKSLD-----VFLFDPTKKHLLGWQLR 626
N+VRL + L++E+ N LD FLF K LG+
Sbjct: 62 NIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKG--LGFCHS 119
Query: 627 VRIIDGIAQDQHM------NPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEG- 679
++ + Q++ K++DFG+AR FG ++ + +V T Y P+
Sbjct: 120 RNVLHRDLKPQNLLINRNGELKLADFGLARAFGI-PVRCYSAEVV-TLWYRPPDVLFGAK 177
Query: 680 VFSVKSDVFSFGVLMLEILSSKK 702
++S D++S G + E+ ++ +
Sbjct: 178 LYSTSIDMWSAGCIFAELANAAR 200
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 86/206 (41%), Gaps = 42/206 (20%)
Query: 527 FSIQSKLGEGGFGPVY-KGRLLNGQEVAVKRLSNQSGQ-GLKEFKNEMMLIAKLQHRNLV 584
F + KLG G FG V+ +G E +K ++ Q +++ + E+ ++ L H N++
Sbjct: 24 FIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNII 83
Query: 585 RLL-------------------------------GCCIEQGEKILIYEYMVNKSLDVFLF 613
++ G + +G + + M+N +L F
Sbjct: 84 KIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMN-ALAYF-- 140
Query: 614 DPTKKHLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSP 673
+H++ L+ I H KI DFG+A +F DE N GT YM+P
Sbjct: 141 --HSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNA---AGTALYMAP 195
Query: 674 EYALEGVFSVKSDVFSFGVLMLEILS 699
E V + K D++S GV+M +L+
Sbjct: 196 EVFKRDV-TFKCDIWSAGVVMYFLLT 220
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 97/225 (43%), Gaps = 58/225 (25%)
Query: 526 NFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
+F + LG+G FG V K R L+ + A+K++ + + L +E+ML+A L H+ +V
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVMLLASLNHQYVV 65
Query: 585 RLLGCCIEQGEKI-------------LIYEYMVNKSLDVFLFDPTKKHLLG------WQL 625
R +E+ + + EY N +L +D L W+L
Sbjct: 66 RYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTL----YDLIHSENLNQQRDEYWRL 121
Query: 626 RVRIIDGIAQ------------------DQHMNPKISDFGMAR---------MFGGDELQ 658
+I++ ++ D+ N KI DFG+A+ L
Sbjct: 122 FRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLP 181
Query: 659 GNTKRI---VGTYGYMSPEYALEGV--FSVKSDVFSFGVLMLEIL 698
G++ + +GT Y++ E L+G ++ K D++S G++ E++
Sbjct: 182 GSSDNLTSAIGTAMYVATE-VLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Query: 642 KISDFGMARMFG--GDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS 699
K+ DFG+AR G+ + T ++GT Y+SPE A +SDV+S G ++ E+L+
Sbjct: 173 KVMDFGIARAIADSGNSVT-QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT 231
Query: 700 SK 701
+
Sbjct: 232 GE 233
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 93/213 (43%), Gaps = 42/213 (19%)
Query: 533 LGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCI- 591
+G+G +G V++G L +G+ VAVK S++ Q + E+ L+H N++ + +
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKIFSSRDEQSWFR-ETEIYNTVLLRHDNILGFIASDMT 73
Query: 592 ---EQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQDQ----------- 637
+ LI Y + SL FL T + L +L V G+A
Sbjct: 74 SRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLALRLAVSAACGLAHLHVEIFGTQGKPA 133
Query: 638 --HMNPK-------------ISDFGMARMF--GGDELQ-GNTKRIVGTYGYMSPEYALEG 679
H + K I+D G+A M G D L GN R VGT YM+PE E
Sbjct: 134 IAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPR-VGTKRYMAPEVLDEQ 192
Query: 680 VF-----SVK-SDVFSFGVLMLEILSSKKNTGV 706
+ S K +D+++FG+++ EI G+
Sbjct: 193 IRTDCFESYKWTDIWAFGLVLWEIARRTIVNGI 225
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 62/144 (43%), Gaps = 35/144 (24%)
Query: 633 IAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGV-FSVKSDVFSFG 691
I D+H + +ISD G+A F + + VGT+GYM+PE +GV + +D FS G
Sbjct: 322 ILLDEHGHVRISDLGLACDFSKKKPHAS----VGTHGYMAPEVLQKGVAYDSSADWFSLG 377
Query: 692 VLMLEILSSKKNTGVYNTDSFNLLGHA-WSLCKNDRAHELMDPVLQNEVSLP-------- 742
++ ++L GH+ + K HE+ L V LP
Sbjct: 378 CMLFKLLR----------------GHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELR 421
Query: 743 -----MLVRYINVALLCVQENAED 761
+L R +N L C+ A++
Sbjct: 422 SLLEGLLQRDVNRRLGCLGRGAQE 445
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 88/201 (43%), Gaps = 29/201 (14%)
Query: 525 ENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFK-----NEMMLIAKL 578
E+F LGEG F R L +E A+K L + +KE K E ++++L
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRL 87
Query: 579 QHRNLVRLLGCCIEQGEKILI-YEYMVNKSLDVFL-----FDPT------------KKHL 620
H V+L + EK+ Y N L ++ FD T ++L
Sbjct: 88 DHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 146
Query: 621 LGWQLRVRII--DGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALE 678
G + R + + I ++ M+ +I+DFG A++ + Q VGT Y+SPE E
Sbjct: 147 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 206
Query: 679 GVFSVKSDVFSFGVLMLEILS 699
SD+++ G ++ ++++
Sbjct: 207 KSACKSSDLWALGCIIYQLVA 227
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 62/144 (43%), Gaps = 35/144 (24%)
Query: 633 IAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGV-FSVKSDVFSFG 691
I D+H + +ISD G+A F + + VGT+GYM+PE +GV + +D FS G
Sbjct: 323 ILLDEHGHVRISDLGLACDFSKKKPHAS----VGTHGYMAPEVLQKGVAYDSSADWFSLG 378
Query: 692 VLMLEILSSKKNTGVYNTDSFNLLGHA-WSLCKNDRAHELMDPVLQNEVSLP-------- 742
++ ++L GH+ + K HE+ L V LP
Sbjct: 379 CMLFKLLR----------------GHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELR 422
Query: 743 -----MLVRYINVALLCVQENAED 761
+L R +N L C+ A++
Sbjct: 423 SLLEGLLQRDVNRRLGCLGRGAQE 446
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 62/144 (43%), Gaps = 35/144 (24%)
Query: 633 IAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGV-FSVKSDVFSFG 691
I D+H + +ISD G+A F + + VGT+GYM+PE +GV + +D FS G
Sbjct: 323 ILLDEHGHVRISDLGLACDFSKKKPHAS----VGTHGYMAPEVLQKGVAYDSSADWFSLG 378
Query: 692 VLMLEILSSKKNTGVYNTDSFNLLGHA-WSLCKNDRAHELMDPVLQNEVSLP-------- 742
++ ++L GH+ + K HE+ L V LP
Sbjct: 379 CMLFKLLR----------------GHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELR 422
Query: 743 -----MLVRYINVALLCVQENAED 761
+L R +N L C+ A++
Sbjct: 423 SLLEGLLQRDVNRRLGCLGRGAQE 446
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 62/144 (43%), Gaps = 35/144 (24%)
Query: 633 IAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGV-FSVKSDVFSFG 691
I D+H + +ISD G+A F + + VGT+GYM+PE +GV + +D FS G
Sbjct: 323 ILLDEHGHVRISDLGLACDFSKKKPHAS----VGTHGYMAPEVLQKGVAYDSSADWFSLG 378
Query: 692 VLMLEILSSKKNTGVYNTDSFNLLGHA-WSLCKNDRAHELMDPVLQNEVSLP-------- 742
++ ++L GH+ + K HE+ L V LP
Sbjct: 379 CMLFKLLR----------------GHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELR 422
Query: 743 -----MLVRYINVALLCVQENAED 761
+L R +N L C+ A++
Sbjct: 423 SLLEGLLQRDVNRRLGCLGRGAQE 446
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 85/207 (41%), Gaps = 32/207 (15%)
Query: 519 SVTAATENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKNEMM---- 573
+ E+F + LG+G FG V+ Q A+K L + + M+
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 71
Query: 574 LIAKLQHRNLVRLLGCCIEQGEKIL-IYEYMVNKSLDVFL-----FDPTK------KHLL 621
L +H L + C + E + + EY+ L + FD ++ + +L
Sbjct: 72 LSLAWEHPFLTHMF-CTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIIL 130
Query: 622 GWQL--------RVRIIDGIAQDQHMNPKISDFGMAR--MFGGDELQGNTKRIVGTYGYM 671
G Q R +D I D+ + KI+DFGM + M G T GT Y+
Sbjct: 131 GLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLG----DAKTNEFCGTPDYI 186
Query: 672 SPEYALEGVFSVKSDVFSFGVLMLEIL 698
+PE L ++ D +SFGVL+ E+L
Sbjct: 187 APEILLGQKYNHSVDWWSFGVLLYEML 213
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 33/67 (49%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
E I +G+G FG VY GR + + + + LK FK E+M + +H N+V
Sbjct: 33 EQLEIGELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVV 92
Query: 585 RLLGCCI 591
+G C+
Sbjct: 93 LFMGACM 99
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 89/210 (42%), Gaps = 33/210 (15%)
Query: 519 SVTAATE-----NFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRL--SNQSGQGLKEFKN 570
S T+A E N+ + +G+G F V R +L G+EVAVK + + + L++
Sbjct: 3 SATSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR 62
Query: 571 EMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRII 630
E+ ++ L H N+V+L + L+ EY + +L + + + R I
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQI 122
Query: 631 DGIAQ-------------------DQHMNPKISDFGMARMFG-GDELQGNTKRIVGTYGY 670
Q D MN KI+DFG + F G++L G Y
Sbjct: 123 VSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDA----FCGAPPY 178
Query: 671 MSPE-YALEGVFSVKSDVFSFGVLMLEILS 699
+PE + + + DV+S GV++ ++S
Sbjct: 179 AAPELFQGKKYDGPEVDVWSLGVILYTLVS 208
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 89/205 (43%), Gaps = 33/205 (16%)
Query: 523 ATENFSIQSKLGEGGFGPVYKGRLLNGQEV-AVKRL--SNQSGQGLK-EFKNEMMLIAKL 578
A E+F I LG+G FG VY R + + A+K L + G++ + + E+ + + L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 579 QHRNLVRLLGCCIEQGEKILIYEYM----VNKSLDVF-LFDPTK--------KHLLGWQL 625
+H N++RL G + LI EY V K L FD + + L +
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCH 130
Query: 626 RVRIIDGIAQDQHM------NPKISDFGMARMFGGDELQGNTKR---IVGTYGYMSPEYA 676
R+I + +++ KI+DFG + + + R + GT Y+ PE
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTTLCGTLDYLPPEMI 183
Query: 677 LEGVFSVKSDVFSFGVLMLEILSSK 701
+ K D++S GVL E L K
Sbjct: 184 EGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 89/203 (43%), Gaps = 27/203 (13%)
Query: 522 AATENFSIQSKLGEGGFGPVYKGRLLNG----QEVAVKRLSNQSGQGLKEFKNEMM--LI 575
A F + LG+G FG V+ + ++G Q A+K L + + + +M ++
Sbjct: 21 ADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDIL 80
Query: 576 AKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSL------DVFLFDPTKK----------- 618
++ H +V+L +G+ LI +++ L +V + K
Sbjct: 81 VEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALD 140
Query: 619 --HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYA 676
H LG R + I D+ + K++DFG+++ E + + GT YM+PE
Sbjct: 141 HLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--FCGTVEYMAPEVV 198
Query: 677 LEGVFSVKSDVFSFGVLMLEILS 699
+ +D +SFGVLM E+L+
Sbjct: 199 NRRGHTQSADWWSFGVLMFEMLT 221
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 95/225 (42%), Gaps = 58/225 (25%)
Query: 526 NFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
+F + LG+G FG V K R L+ + A+K++ + + L +E+ L+A L H+ +V
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVXLLASLNHQYVV 65
Query: 585 RLLGCCIEQGEKI-------------LIYEYMVNKSLDVFLFDPTKKHLLG------WQL 625
R +E+ + + EY N++L +D L W+L
Sbjct: 66 RYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTL----YDLIHSENLNQQRDEYWRL 121
Query: 626 RVRIIDGIAQ------------------DQHMNPKISDFGMAR---------MFGGDELQ 658
+I++ ++ D+ N KI DFG+A+ L
Sbjct: 122 FRQILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLP 181
Query: 659 GNTKRI---VGTYGYMSPEYALEGV--FSVKSDVFSFGVLMLEIL 698
G++ + +GT Y++ E L+G ++ K D +S G++ E +
Sbjct: 182 GSSDNLTSAIGTAXYVATE-VLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 33/58 (56%)
Query: 642 KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS 699
KI DFG+AR D +M+PE + V++++SDV+SFGVL+ EI S
Sbjct: 238 KICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 83/207 (40%), Gaps = 42/207 (20%)
Query: 567 EFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSL-----DVFLFDPTKKHLL 621
+FKNE+ +I +++ + G E +IYEYM N S+ F+ D +
Sbjct: 89 DFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFI 148
Query: 622 GWQLRVRIIDG-----------------------IAQDQHMNPKISDFGMARMFGGDELQ 658
Q+ II I D++ K+SDFG + +++
Sbjct: 149 PIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIK 208
Query: 659 GNTKRIVGTYGYMSPE-YALEGVFS-VKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLG 716
G+ GTY +M PE ++ E ++ K D++S G+ + + YN F+L
Sbjct: 209 GSR----GTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMF--------YNVVPFSLKI 256
Query: 717 HAWSLCKNDRAHELMDPVLQNEVSLPM 743
L N R + P+ +N P+
Sbjct: 257 SLVELFNNIRTKNIEYPLDRNHFLYPL 283
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 87/202 (43%), Gaps = 27/202 (13%)
Query: 523 ATENFSIQSKLGEGGFGPVYKGRLLNGQEV-AVKRL--SNQSGQGLK-EFKNEMMLIAKL 578
A E+F I LG+G FG VY R N + + A+K L + G++ + + E+ + + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 579 QHRNLVRLLGCCIEQGEKILIYEYM----VNKSLDVF-LFDPTK--------KHLLGWQL 625
+H N++RL G + LI EY V + L FD + + L +
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 626 RVRIIDGIAQDQHM------NPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEG 679
++I + +++ KI+DFG + + GT Y+ PE
Sbjct: 126 SKKVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRAALCGTLDYLPPEMIEGR 181
Query: 680 VFSVKSDVFSFGVLMLEILSSK 701
+ K D++S GVL E L K
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 33/58 (56%)
Query: 642 KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS 699
KI DFG+AR D +M+PE + V++++SDV+SFGVL+ EI S
Sbjct: 233 KICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 86/202 (42%), Gaps = 27/202 (13%)
Query: 523 ATENFSIQSKLGEGGFGPVYKGRLLNGQEV-AVKRL--SNQSGQGLK-EFKNEMMLIAKL 578
A E+F I LG+G FG VY R + + A+K L + G++ + + E+ + + L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 579 QHRNLVRLLGCCIEQGEKILIYEYM----VNKSLDVF-LFDPTK--------KHLLGWQL 625
+H N++RL G + LI EY V K L FD + + L +
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCH 130
Query: 626 RVRIIDGIAQDQHM------NPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEG 679
R+I + +++ KI+DFG + + GT Y+ PE
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLXGTLDYLPPEMIEGR 186
Query: 680 VFSVKSDVFSFGVLMLEILSSK 701
+ K D++S GVL E L K
Sbjct: 187 MHDEKVDLWSLGVLCYEFLVGK 208
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 33/58 (56%)
Query: 642 KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS 699
KI DFG+AR D +M+PE + V++++SDV+SFGVL+ EI S
Sbjct: 240 KICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 63/139 (45%), Gaps = 21/139 (15%)
Query: 642 KISDFGMARMF--GGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS 699
KI DFG+AR D ++ R+ +M+PE + ++S KSDV+S+GVL+ EI S
Sbjct: 239 KICDFGLARDIYKNPDYVRKGDTRL--PLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
Query: 700 --SKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQE 757
GV + F C R M E S P + + + L C
Sbjct: 297 LGGSPYPGVQMDEDF---------CSRLREGMRMR---APEYSTPEIYQ---IMLDCWHR 341
Query: 758 NAEDRPTMSDVVSMINNEL 776
+ ++RP +++V + + L
Sbjct: 342 DPKERPRFAELVEKLGDLL 360
Score = 36.2 bits (82), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 41/91 (45%), Gaps = 13/91 (14%)
Query: 523 ATENFSIQSKLGEGGFGPVYKGRLLNGQE------VAVKRLSNQSGQGLKEFKNEMMLIA 576
A E + LG G FG V + ++ VAVK L + G E+K M +
Sbjct: 25 ARERLKLGKSLGRGAFGKVVQASAFGIKKSPTCRTVAVKML--KEGATASEYKALMTELK 82
Query: 577 KL----QHRNLVRLLGCCIEQGEKIL-IYEY 602
L H N+V LLG C +QG ++ I EY
Sbjct: 83 ILTHIGHHLNVVNLLGACTKQGGPLMVIVEY 113
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 86/202 (42%), Gaps = 27/202 (13%)
Query: 523 ATENFSIQSKLGEGGFGPVYKGRLLNGQEV-AVKRL--SNQSGQGLK-EFKNEMMLIAKL 578
A E+F I LG+G FG VY R + + A+K L + G++ + + E+ + + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 579 QHRNLVRLLGCCIEQGEKILIYEYM----VNKSLDVF-LFDPTK--------KHLLGWQL 625
+H N++RL G + LI EY V + L FD + + L +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 626 RVRIIDGIAQDQHM------NPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEG 679
R+I + +++ KI+DFG + + GT Y+ PE
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTELCGTLDYLPPEMIEGR 181
Query: 680 VFSVKSDVFSFGVLMLEILSSK 701
+ K D++S GVL E L K
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 89/205 (43%), Gaps = 33/205 (16%)
Query: 523 ATENFSIQSKLGEGGFGPVYKGRLLNGQEV-AVKRL--SNQSGQGLK-EFKNEMMLIAKL 578
A E+F I LG+G FG VY R + + A+K L + G++ + + E+ + + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 579 QHRNLVRLLGCCIEQGEKILIYEYM----VNKSLDVF-LFDPTK--------KHLLGWQL 625
+H N++RL G + LI EY V + L FD + + L +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 626 RVRIIDGIAQDQHM------NPKISDFGMARMFGGDELQGNTKR---IVGTYGYMSPEYA 676
R+I + +++ KI+DFG + + + R + GT Y+ PE
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTTLCGTLDYLPPEMI 178
Query: 677 LEGVFSVKSDVFSFGVLMLEILSSK 701
+ K D++S GVL E L K
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 33/58 (56%)
Query: 642 KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS 699
KI DFG+AR D +M+PE + V++++SDV+SFGVL+ EI S
Sbjct: 231 KICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 90/210 (42%), Gaps = 33/210 (15%)
Query: 519 SVTAATE-----NFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRL--SNQSGQGLKEFKN 570
S T+A E N+ + +G+G F V R +L G+EVAVK + + + L++
Sbjct: 3 SATSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR 62
Query: 571 EMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRII 630
E+ ++ L H N+V+L + L+ EY + +L + + + R I
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQI 122
Query: 631 DGIAQ-------------------DQHMNPKISDFGMARMFG-GDELQGNTKRIVGTYGY 670
Q D MN KI+DFG + F G++L G+ Y
Sbjct: 123 VSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT----FCGSPPY 178
Query: 671 MSPE-YALEGVFSVKSDVFSFGVLMLEILS 699
+PE + + + DV+S GV++ ++S
Sbjct: 179 AAPELFQGKKYDGPEVDVWSLGVILYTLVS 208
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 90/210 (42%), Gaps = 33/210 (15%)
Query: 519 SVTAATE-----NFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRL--SNQSGQGLKEFKN 570
S T+A E N+ + +G+G F V R +L G+EVAVK + + + L++
Sbjct: 3 SATSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR 62
Query: 571 EMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRII 630
E+ ++ L H N+V+L + L+ EY + +L + + + R I
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQI 122
Query: 631 DGIAQ-------------------DQHMNPKISDFGMARMFG-GDELQGNTKRIVGTYGY 670
Q D MN KI+DFG + F G++L G+ Y
Sbjct: 123 VSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT----FCGSPPY 178
Query: 671 MSPE-YALEGVFSVKSDVFSFGVLMLEILS 699
+PE + + + DV+S GV++ ++S
Sbjct: 179 AAPELFQGKKYDGPEVDVWSLGVILYTLVS 208
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 89/205 (43%), Gaps = 33/205 (16%)
Query: 523 ATENFSIQSKLGEGGFGPVYKGRLLNGQEV-AVKRL--SNQSGQGLK-EFKNEMMLIAKL 578
A E+F I LG+G FG VY R + + A+K L + G++ + + E+ + + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 579 QHRNLVRLLGCCIEQGEKILIYEYM----VNKSLDVF-LFDPTK--------KHLLGWQL 625
+H N++RL G + LI EY V + L FD + + L +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 626 RVRIIDGIAQDQHM------NPKISDFGMARMFGGDELQGNTKR---IVGTYGYMSPEYA 676
R+I + +++ KI+DFG + + + R + GT Y+ PE
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTDLCGTLDYLPPEMI 178
Query: 677 LEGVFSVKSDVFSFGVLMLEILSSK 701
+ K D++S GVL E L K
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 89/205 (43%), Gaps = 33/205 (16%)
Query: 523 ATENFSIQSKLGEGGFGPVYKGRLLNGQEV-AVKRL--SNQSGQGLK-EFKNEMMLIAKL 578
A E+F I LG+G FG VY R + + A+K L + G++ + + E+ + + L
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 579 QHRNLVRLLGCCIEQGEKILIYEYM----VNKSLDVF-LFDPTK--------KHLLGWQL 625
+H N++RL G + LI EY V + L FD + + L +
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 151
Query: 626 RVRIIDGIAQDQHM------NPKISDFGMARMFGGDELQGNTKR---IVGTYGYMSPEYA 676
R+I + +++ KI+DFG + + + R + GT Y+ PE
Sbjct: 152 SKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRDDLCGTLDYLPPEMI 204
Query: 677 LEGVFSVKSDVFSFGVLMLEILSSK 701
+ K D++S GVL E L K
Sbjct: 205 EGRMHDEKVDLWSLGVLCYEFLVGK 229
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 89/205 (43%), Gaps = 33/205 (16%)
Query: 523 ATENFSIQSKLGEGGFGPVYKGRLLNGQEV-AVKRL--SNQSGQGLK-EFKNEMMLIAKL 578
A E+F I LG+G FG VY R + + A+K L + G++ + + E+ + + L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 579 QHRNLVRLLGCCIEQGEKILIYEYM----VNKSLDVF-LFDPTK--------KHLLGWQL 625
+H N++RL G + LI EY V + L FD + + L +
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 126
Query: 626 RVRIIDGIAQDQHM------NPKISDFGMARMFGGDELQGNTKR---IVGTYGYMSPEYA 676
R+I + +++ KI+DFG + + + R + GT Y+ PE
Sbjct: 127 SKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRDTLCGTLDYLPPEMI 179
Query: 677 LEGVFSVKSDVFSFGVLMLEILSSK 701
+ K D++S GVL E L K
Sbjct: 180 EGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 89/205 (43%), Gaps = 33/205 (16%)
Query: 523 ATENFSIQSKLGEGGFGPVYKGRLLNGQEV-AVKRL--SNQSGQGLK-EFKNEMMLIAKL 578
A E+F I LG+G FG VY R + + A+K L + G++ + + E+ + + L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 579 QHRNLVRLLGCCIEQGEKILIYEYM----VNKSLDVF-LFDPTK--------KHLLGWQL 625
+H N++RL G + LI EY V + L FD + + L +
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 126
Query: 626 RVRIIDGIAQDQHM------NPKISDFGMARMFGGDELQGNTKR---IVGTYGYMSPEYA 676
R+I + +++ KI+DFG + + + R + GT Y+ PE
Sbjct: 127 SKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTDLCGTLDYLPPEMI 179
Query: 677 LEGVFSVKSDVFSFGVLMLEILSSK 701
+ K D++S GVL E L K
Sbjct: 180 EGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 50/111 (45%), Gaps = 8/111 (7%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRL--------LNGQEVAVKRLSNQSGQGLKEFKNEMMLIA 576
E+ LG+G F ++KG L+ EV +K L + F +++
Sbjct: 8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMS 67
Query: 577 KLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRV 627
KL H++LV G C+ E IL+ E++ SLD +L + W+L V
Sbjct: 68 KLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEV 118
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 86/202 (42%), Gaps = 27/202 (13%)
Query: 523 ATENFSIQSKLGEGGFGPVYKGRLLNGQEV-AVKRL--SNQSGQGLK-EFKNEMMLIAKL 578
A E+F I LG+G FG VY R + + A+K L + G++ + + E+ + + L
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 579 QHRNLVRLLGCCIEQGEKILIYEYM----VNKSLDVF-LFDPTK--------KHLLGWQL 625
+H N++RL G + LI EY V + L FD + + L +
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 127
Query: 626 RVRIIDGIAQDQHM------NPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEG 679
R+I + +++ KI+DFG + + GT Y+ PE
Sbjct: 128 SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLCGTLDYLPPEMIEGR 183
Query: 680 VFSVKSDVFSFGVLMLEILSSK 701
+ K D++S GVL E L K
Sbjct: 184 MHDEKVDLWSLGVLCYEFLVGK 205
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 89/205 (43%), Gaps = 33/205 (16%)
Query: 523 ATENFSIQSKLGEGGFGPVYKGRLLNGQEV-AVKRL--SNQSGQGLK-EFKNEMMLIAKL 578
A E+F I LG+G FG VY R + + A+K L + G++ + + E+ + + L
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 579 QHRNLVRLLGCCIEQGEKILIYEYM----VNKSLDVF-LFDPTK--------KHLLGWQL 625
+H N++RL G + LI EY V + L FD + + L +
Sbjct: 83 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 142
Query: 626 RVRIIDGIAQDQHM------NPKISDFGMARMFGGDELQGNTKR---IVGTYGYMSPEYA 676
R+I + +++ KI+DFG + + + R + GT Y+ PE
Sbjct: 143 SKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTTLCGTLDYLPPEMI 195
Query: 677 LEGVFSVKSDVFSFGVLMLEILSSK 701
+ K D++S GVL E L K
Sbjct: 196 EGRMHDEKVDLWSLGVLCYEFLVGK 220
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 89/205 (43%), Gaps = 33/205 (16%)
Query: 523 ATENFSIQSKLGEGGFGPVYKGRLLNGQEV-AVKRL--SNQSGQGLK-EFKNEMMLIAKL 578
A E+F I LG+G FG VY R + + A+K L + G++ + + E+ + + L
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 579 QHRNLVRLLGCCIEQGEKILIYEYM----VNKSLDVF-LFDPTK--------KHLLGWQL 625
+H N++RL G + LI EY V + L FD + + L +
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 151
Query: 626 RVRIIDGIAQDQHM------NPKISDFGMARMFGGDELQGNTKR---IVGTYGYMSPEYA 676
R+I + +++ KI+DFG + + + R + GT Y+ PE
Sbjct: 152 SKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTTLCGTLDYLPPEMI 204
Query: 677 LEGVFSVKSDVFSFGVLMLEILSSK 701
+ K D++S GVL E L K
Sbjct: 205 EGRMHDEKVDLWSLGVLCYEFLVGK 229
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 89/205 (43%), Gaps = 33/205 (16%)
Query: 523 ATENFSIQSKLGEGGFGPVYKGRLLNGQEV-AVKRL--SNQSGQGLK-EFKNEMMLIAKL 578
A E+F I LG+G FG VY R + + A+K L + G++ + + E+ + + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 579 QHRNLVRLLGCCIEQGEKILIYEYM----VNKSLDVF-LFDPTK--------KHLLGWQL 625
+H N++RL G + LI EY V + L FD + + L +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 626 RVRIIDGIAQDQHM------NPKISDFGMARMFGGDELQGNTKR---IVGTYGYMSPEYA 676
R+I + +++ KI+DFG + + + R + GT Y+ PE
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTDLCGTLDYLPPEMI 178
Query: 677 LEGVFSVKSDVFSFGVLMLEILSSK 701
+ K D++S GVL E L K
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 85/199 (42%), Gaps = 33/199 (16%)
Query: 527 FSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKE-FKNEMMLIAKLQHRNLV 584
F + LG G F V G+ AVK + ++ +G + +NE+ ++ K++H N+V
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIV 83
Query: 585 ----------------------RLLGCCIEQG---EKILIYEYMVNKSLDVFLFDPTKKH 619
L +E+G EK ++ + LD + +
Sbjct: 84 ALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDA--STLIRQVLDAVYY-LHRMG 140
Query: 620 LLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEG 679
++ L+ + +QD+ ISDFG+++M G ++ GT GY++PE +
Sbjct: 141 IVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTA---CGTPGYVAPEVLAQK 197
Query: 680 VFSVKSDVFSFGVLMLEIL 698
+S D +S GV+ +L
Sbjct: 198 PYSKAVDCWSIGVIAYILL 216
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 93/244 (38%), Gaps = 44/244 (18%)
Query: 523 ATENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQ---SGQGLKEFKNEMMLIAKL 578
+NF LG+G FG V R+ G AVK L ++ E +++
Sbjct: 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLA 80
Query: 579 QHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKK-------------------- 618
++ + L CC + +++ VN +F +++
Sbjct: 81 RNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFL 140
Query: 619 HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALE 678
H G R +D + D + K++DFGM + G T GT Y++PE E
Sbjct: 141 HDKGIIYRDLKLDNVLLDHEGHCKLADFGMCK--EGICNGVTTATFCGTPDYIAPEILQE 198
Query: 679 GVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNE 738
++ D ++ GVL+ E+L GHA +N+ +L + +L +E
Sbjct: 199 MLYGPAVDWWAMGVLLYEMLC----------------GHAPFEAENE--DDLFEAILNDE 240
Query: 739 VSLP 742
V P
Sbjct: 241 VVYP 244
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 85/207 (41%), Gaps = 32/207 (15%)
Query: 519 SVTAATENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKNEMM---- 573
+ E+F + LG+G FG V+ Q A+K L + + M+
Sbjct: 11 QIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 70
Query: 574 LIAKLQHRNLVRLLGCCIEQGEKIL-IYEYMVNKSLDVFL-----FDPTK------KHLL 621
L +H L + C + E + + EY+ L + FD ++ + +L
Sbjct: 71 LSLAWEHPFLTHMF-CTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIIL 129
Query: 622 GWQL--------RVRIIDGIAQDQHMNPKISDFGMAR--MFGGDELQGNTKRIVGTYGYM 671
G Q R +D I D+ + KI+DFGM + M G T GT Y+
Sbjct: 130 GLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLG----DAKTNXFCGTPDYI 185
Query: 672 SPEYALEGVFSVKSDVFSFGVLMLEIL 698
+PE L ++ D +SFGVL+ E+L
Sbjct: 186 APEILLGQKYNHSVDWWSFGVLLYEML 212
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 89/205 (43%), Gaps = 33/205 (16%)
Query: 523 ATENFSIQSKLGEGGFGPVYKGRLLNGQEV-AVKRL--SNQSGQGLK-EFKNEMMLIAKL 578
A E+F I LG+G FG VY R + + A+K L + G++ + + E+ + + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 579 QHRNLVRLLGCCIEQGEKILIYEYM----VNKSLDVF-LFDPTK--------KHLLGWQL 625
+H N++RL G + LI EY V + L FD + + L +
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 626 RVRIIDGIAQDQHM------NPKISDFGMARMFGGDELQGNTKR---IVGTYGYMSPEYA 676
R+I + +++ KI+DFG + + + R + GT Y+ PE
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTTLCGTLDYLPPEMI 181
Query: 677 LEGVFSVKSDVFSFGVLMLEILSSK 701
+ K D++S GVL E L K
Sbjct: 182 EGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 89/205 (43%), Gaps = 33/205 (16%)
Query: 523 ATENFSIQSKLGEGGFGPVYKGRLLNGQEV-AVKRL--SNQSGQGLK-EFKNEMMLIAKL 578
A E+F I LG+G FG VY R + + A+K L + G++ + + E+ + + L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 579 QHRNLVRLLGCCIEQGEKILIYEYM----VNKSLDVF-LFDPTK--------KHLLGWQL 625
+H N++RL G + LI EY V + L FD + + L +
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 130
Query: 626 RVRIIDGIAQDQHM------NPKISDFGMARMFGGDELQGNTKR---IVGTYGYMSPEYA 676
R+I + +++ KI+DFG + + + R + GT Y+ PE
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTDLCGTLDYLPPEMI 183
Query: 677 LEGVFSVKSDVFSFGVLMLEILSSK 701
+ K D++S GVL E L K
Sbjct: 184 EGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 89/205 (43%), Gaps = 33/205 (16%)
Query: 523 ATENFSIQSKLGEGGFGPVYKGRLLNGQEV-AVKRL--SNQSGQGLK-EFKNEMMLIAKL 578
A E+F I LG+G FG VY R + + A+K L + G++ + + E+ + + L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 579 QHRNLVRLLGCCIEQGEKILIYEYM----VNKSLDVF-LFDPTK--------KHLLGWQL 625
+H N++RL G + LI EY V + L FD + + L +
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 130
Query: 626 RVRIIDGIAQDQHM------NPKISDFGMARMFGGDELQGNTKR---IVGTYGYMSPEYA 676
R+I + +++ KI+DFG + + + R + GT Y+ PE
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTTLCGTLDYLPPEMI 183
Query: 677 LEGVFSVKSDVFSFGVLMLEILSSK 701
+ K D++S GVL E L K
Sbjct: 184 EGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 84/200 (42%), Gaps = 31/200 (15%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
E + I LG G FG V++ + ++ + + G K E+ ++ +HRN++
Sbjct: 5 EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNIL 64
Query: 585 RLLGCCIEQGEKILIYEYMVNKSLDVF------LFDPTKKHLLGW--------------- 623
L E ++I+E++ LD+F F+ ++ ++ +
Sbjct: 65 HLHESFESMEELVMIFEFI--SGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHN 122
Query: 624 --QLRVRIIDGIAQDQHMNP-KISDFGMARMFG-GDELQGNTKRIVGTYGYMSPEYALEG 679
+R + I Q + + KI +FG AR GD N + + Y +PE
Sbjct: 123 IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD----NFRLLFTAPEYYAPEVHQHD 178
Query: 680 VFSVKSDVFSFGVLMLEILS 699
V S +D++S G L+ +LS
Sbjct: 179 VVSTATDMWSLGTLVYVLLS 198
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 89/203 (43%), Gaps = 27/203 (13%)
Query: 522 AATENFSIQSKLGEGGFGPVYKGRLLNG----QEVAVKRLSNQSGQGLKEFKNEMM--LI 575
A F + LG+G FG V+ + ++G Q A+K L + + + +M ++
Sbjct: 22 ADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDIL 81
Query: 576 AKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSL------DVFLFDPTKK----------- 618
++ H +V+L +G+ LI +++ L +V + K
Sbjct: 82 VEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALD 141
Query: 619 --HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYA 676
H LG R + I D+ + K++DFG+++ E + + GT YM+PE
Sbjct: 142 HLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--FCGTVEYMAPEVV 199
Query: 677 LEGVFSVKSDVFSFGVLMLEILS 699
+ +D +SFGVLM E+L+
Sbjct: 200 NRRGHTQSADWWSFGVLMFEMLT 222
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 85/209 (40%), Gaps = 50/209 (23%)
Query: 526 NFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRL--SNQSGQGLKEFKNEMMLIAKLQHRN 582
N+ + +G+G F V R +L G+EVAVK + + + L++ E+ ++ L H N
Sbjct: 8 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 67
Query: 583 LVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGW------QLRVRIIDGIAQ- 635
+V+L + L+ EY +FD H GW + + R I Q
Sbjct: 68 IVKLFEVIETEKTLYLVMEYASGGE----VFDYLVAH--GWMKEKEARAKFRQIVSAVQY 121
Query: 636 ------------------DQHMNPKISDFGMARMFG-GDELQGNTKRIVGTYGYMSPEYA 676
D MN KI+DFG + F G++L SP YA
Sbjct: 122 CHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCG---------SPPYA 172
Query: 677 LEGVFSVKS------DVFSFGVLMLEILS 699
+F K DV+S GV++ ++S
Sbjct: 173 APELFQGKKYDGPEVDVWSLGVILYTLVS 201
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 89/205 (43%), Gaps = 33/205 (16%)
Query: 523 ATENFSIQSKLGEGGFGPVYKGRLLNGQEV-AVKRL--SNQSGQGLK-EFKNEMMLIAKL 578
A E+F I LG+G FG VY R + + A+K L + G++ + + E+ + + L
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 579 QHRNLVRLLGCCIEQGEKILIYEYM----VNKSLDVF-LFDPTK--------KHLLGWQL 625
+H N++RL G + LI EY V + L FD + + L +
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 124
Query: 626 RVRIIDGIAQDQHM------NPKISDFGMARMFGGDELQGNTKR---IVGTYGYMSPEYA 676
R+I + +++ KI+DFG + + + R + GT Y+ PE
Sbjct: 125 SKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTTLCGTLDYLPPEMI 177
Query: 677 LEGVFSVKSDVFSFGVLMLEILSSK 701
+ K D++S GVL E L K
Sbjct: 178 EGRMHDEKVDLWSLGVLCYEFLVGK 202
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 88/218 (40%), Gaps = 49/218 (22%)
Query: 519 SVTAATE-----NFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRL--SNQSGQGLKEFKN 570
S T+A E N+ + +G+G F V R +L G+EVAV+ + + + L++
Sbjct: 3 SATSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFR 62
Query: 571 EMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRII 630
E+ ++ L H N+V+L + L+ EY + +L + + + R I
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQI 122
Query: 631 DGIAQ-------------------DQHMNPKISDFGMAR--MFGG--DELQGNTKRIVGT 667
Q D MN KI+DFG + FG DE G
Sbjct: 123 VSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFCG-------- 174
Query: 668 YGYMSPEYALEGVFSVKS------DVFSFGVLMLEILS 699
SP YA +F K DV+S GV++ ++S
Sbjct: 175 ----SPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS 208
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 98/208 (47%), Gaps = 39/208 (18%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVK-----RLSN-QSGQGLKEFKNEMMLIAK 577
+++ + +LG G F V K R G+E A K RLS+ + G +E + E+ ++ +
Sbjct: 12 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 71
Query: 578 LQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLL---GWQLRVRIIDGIA 634
++H N++ L + + +LI E + L F F K+ L Q +I+DG+
Sbjct: 72 IRHPNIITLHDIFENKTDVVLILELVSGGEL--FDFLAEKESLTEDEATQFLKQILDGVH 129
Query: 635 Q-------------------DQHM-NPKIS--DFGMA-RMFGGDELQGNTKRIVGTYGYM 671
D+++ NP+I DFG+A ++ G+E K I GT ++
Sbjct: 130 YLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF----KNIFGTPEFV 185
Query: 672 SPEYALEGVFSVKSDVFSFGVLMLEILS 699
+PE +++D++S GV+ +LS
Sbjct: 186 APEIVNYEPLGLEADMWSIGVITYILLS 213
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 89/203 (43%), Gaps = 27/203 (13%)
Query: 522 AATENFSIQSKLGEGGFGPVYKGRLLNG----QEVAVKRLSNQSGQGLKEFKNEMM--LI 575
A F + LG+G FG V+ + ++G Q A+K L + + + +M ++
Sbjct: 21 ADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDIL 80
Query: 576 AKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSL------DVFLFDPTKK----------- 618
++ H +V+L +G+ LI +++ L +V + K
Sbjct: 81 VEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALD 140
Query: 619 --HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYA 676
H LG R + I D+ + K++DFG+++ E + + GT YM+PE
Sbjct: 141 HLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--FCGTVEYMAPEVV 198
Query: 677 LEGVFSVKSDVFSFGVLMLEILS 699
+ +D +SFGVLM E+L+
Sbjct: 199 NRRGHTQSADWWSFGVLMFEMLT 221
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 89/205 (43%), Gaps = 33/205 (16%)
Query: 523 ATENFSIQSKLGEGGFGPVYKGRLLNGQEV-AVKRL--SNQSGQGLK-EFKNEMMLIAKL 578
A E+F I LG+G FG VY R + + A+K L + G++ + + E+ + + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 579 QHRNLVRLLGCCIEQGEKILIYEYM----VNKSLDVF-LFDPTK--------KHLLGWQL 625
+H N++RL G + LI EY V + L FD + + L +
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 626 RVRIIDGIAQDQHM------NPKISDFGMARMFGGDELQGNTKR---IVGTYGYMSPEYA 676
R+I + +++ KI+DFG + + + R + GT Y+ PE
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRAALCGTLDYLPPEMI 181
Query: 677 LEGVFSVKSDVFSFGVLMLEILSSK 701
+ K D++S GVL E L K
Sbjct: 182 EGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 87/216 (40%), Gaps = 54/216 (25%)
Query: 533 LGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKE-FKNEMMLIAKLQHRNLVRLLGCC 590
LG GGFG V++ + ++ A+KR+ + + +E E+ +AKL+H +VR
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAW 72
Query: 591 IEQGEKILIYEYMVNKSLDVFLFDPT----KKHLLGW----------------QLRVRII 630
+E+ E + S V+L+ K++L W + ++I
Sbjct: 73 LEKNTT----EKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIA 128
Query: 631 DGIA-------QDQHMNP-----------KISDFGMARMFGGDELQ----------GNTK 662
+ + + + P K+ DFG+ DE +
Sbjct: 129 EAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHT 188
Query: 663 RIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEIL 698
VGT YMSPE +S K D+FS G+++ E+L
Sbjct: 189 GQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 100/222 (45%), Gaps = 29/222 (13%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEV-AVKRLSNQSGQGLKEFKN---EMMLIAKLQH 580
++F I +G+G FG V + + +++ A+K ++ Q E +N E+ ++ L+H
Sbjct: 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEH 74
Query: 581 RNLVRLLGCCIEQGEKILIYEYMVNKSL------DVFLFDPTKKHL-------LGWQLRV 627
LV L ++ + ++ + ++ L +V + T K L +
Sbjct: 75 PFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQ 134
Query: 628 RII------DGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEY--ALEG 679
RII D I D+H + I+DF +A M E Q T + GT YM+PE + +G
Sbjct: 135 RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPR-ETQITT--MAGTKPYMAPEMFSSRKG 191
Query: 680 V-FSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWS 720
+S D +S GV E+L ++ + ++ S + H +
Sbjct: 192 AGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFE 233
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 98/208 (47%), Gaps = 39/208 (18%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVK-----RLSN-QSGQGLKEFKNEMMLIAK 577
+++ + +LG G F V K R G+E A K RLS+ + G +E + E+ ++ +
Sbjct: 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 64
Query: 578 LQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLL---GWQLRVRIIDGIA 634
++H N++ L + + +LI E + L F F K+ L Q +I+DG+
Sbjct: 65 IRHPNIITLHDIFENKTDVVLILELVSGGEL--FDFLAEKESLTEDEATQFLKQILDGVH 122
Query: 635 Q-------------------DQHM-NPKIS--DFGMA-RMFGGDELQGNTKRIVGTYGYM 671
D+++ NP+I DFG+A ++ G+E K I GT ++
Sbjct: 123 YLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF----KNIFGTPEFV 178
Query: 672 SPEYALEGVFSVKSDVFSFGVLMLEILS 699
+PE +++D++S GV+ +LS
Sbjct: 179 APEIVNYEPLGLEADMWSIGVITYILLS 206
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 88/202 (43%), Gaps = 29/202 (14%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNG--------QEVAVKRLSNQSGQGLKEFKNEMMLIA 576
E F + LG+GG+G V++ R + G +V K + ++ + K E ++
Sbjct: 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILE 76
Query: 577 KLQHRNLVRLLGCCIEQGEKILIYEYMVNKSL-------DVFLFDPTKKHL------LGW 623
+++H +V L+ G+ LI EY+ L +F+ D +L LG
Sbjct: 77 EVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGH 136
Query: 624 QLRVRII------DGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYAL 677
+ II + I + + K++DFG+ + D +T GT YM+PE +
Sbjct: 137 LHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHT--FCGTIEYMAPEILM 194
Query: 678 EGVFSVKSDVFSFGVLMLEILS 699
+ D +S G LM ++L+
Sbjct: 195 RSGHNRAVDWWSLGALMYDMLT 216
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 101/225 (44%), Gaps = 49/225 (21%)
Query: 518 ASVTAATENFSIQS----------KLGEGGFGPVYKGRLL-NGQEVAVK-----RL-SNQ 560
+ V TEN QS +LG G F V K R G+E A K RL S++
Sbjct: 9 SGVDLGTENLYFQSMVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSR 68
Query: 561 SGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHL 620
G +E + E+ ++ +++H N++ L + + +LI E + L F F K+ L
Sbjct: 69 RGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGEL--FDFLAEKESL 126
Query: 621 L---GWQLRVRIIDGIAQ-------------------DQHM-NPKIS--DFGMA-RMFGG 654
Q +I+DG+ D+++ NP+I DFG+A ++ G
Sbjct: 127 TEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAG 186
Query: 655 DELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS 699
+E K I GT +++PE +++D++S GV+ +LS
Sbjct: 187 NEF----KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 227
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 86/200 (43%), Gaps = 39/200 (19%)
Query: 533 LGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKN-EMMLIAKLQHRNLVRLLGCCI 591
+G G FG V++ +L+ EVA+K++ K FKN E+ ++ ++H N+V L
Sbjct: 48 IGNGSFGVVFQAKLVESDEVAIKKVLQD-----KRFKNRELQIMRIVKHPNVVDLKAFFY 102
Query: 592 EQGEKI------LIYEYM-------------VNKSLDVFLFDPTKKHLLGWQLRVRII-- 630
G+K L+ EY+ + +++ + L LL + I
Sbjct: 103 SNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGI 162
Query: 631 ---DGIAQDQHMNP-----KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGV-F 681
D Q+ ++P K+ DFG A++ E N I Y Y +PE +
Sbjct: 163 CHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGE--PNVSXICSRY-YRAPELIFGATNY 219
Query: 682 SVKSDVFSFGVLMLEILSSK 701
+ D++S G +M E++ +
Sbjct: 220 TTNIDIWSTGCVMAELMQGQ 239
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 86/206 (41%), Gaps = 35/206 (16%)
Query: 523 ATENFSIQSKLGEGGFGPVYKGR-----LLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAK 577
A E+F I LG+G FG VY R + +V K ++G + + E+ + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSH 67
Query: 578 LQHRNLVRLLGCCIEQGEKILIYEYM----VNKSLDVF-LFDPTK--------KHLLGWQ 624
L+H N++RL G + LI EY V + L FD + + L +
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 127
Query: 625 LRVRIIDGIAQDQHM------NPKISDFGMARMFGGDELQGNTKR---IVGTYGYMSPEY 675
R+I + +++ KI+DFG + + + R + GT Y+ PE
Sbjct: 128 HSKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRDDLCGTLDYLPPEM 180
Query: 676 ALEGVFSVKSDVFSFGVLMLEILSSK 701
+ K D++S GVL E L K
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 83/198 (41%), Gaps = 40/198 (20%)
Query: 533 LGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKN-EMMLIAKLQHRNLVRLLGCC 590
+G G FG VY+ +L + G+ VA+K++ K FKN E+ ++ KL H N+VRL
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 116
Query: 591 IEQGEKI------LIYEYMVNKSLDVFLFDPTKKHLLG--------WQLRVRII------ 630
GEK L+ +Y+ V K L +QL +
Sbjct: 117 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 176
Query: 631 ----DGIAQDQHMNP-----KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGV- 680
D Q+ ++P K+ DFG A+ E N I Y Y +PE
Sbjct: 177 ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSRY-YRAPELIFGATD 233
Query: 681 FSVKSDVFSFGVLMLEIL 698
++ DV+S G ++ E+L
Sbjct: 234 YTSSIDVWSAGCVLAELL 251
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 83/198 (41%), Gaps = 40/198 (20%)
Query: 533 LGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKN-EMMLIAKLQHRNLVRLLGCC 590
+G G FG VY+ +L + G+ VA+K++ K FKN E+ ++ KL H N+VRL
Sbjct: 56 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 110
Query: 591 IEQGEKI------LIYEYMVNKSLDVFLFDPTKKHLLG--------WQLRVRII------ 630
GEK L+ +Y+ V K L +QL +
Sbjct: 111 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 170
Query: 631 ----DGIAQDQHMNP-----KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGV- 680
D Q+ ++P K+ DFG A+ E N I Y Y +PE
Sbjct: 171 ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSRY-YRAPELIFGATD 227
Query: 681 FSVKSDVFSFGVLMLEIL 698
++ DV+S G ++ E+L
Sbjct: 228 YTSSIDVWSAGCVLAELL 245
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 88/205 (42%), Gaps = 33/205 (16%)
Query: 523 ATENFSIQSKLGEGGFGPVYKGRLLNGQEV-AVKRL--SNQSGQGLK-EFKNEMMLIAKL 578
A E+F I LG+G FG VY R + + A+K L + G++ + + E+ + + L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 579 QHRNLVRLLGCCIEQGEKILIYEYM----VNKSLDVF-LFDPTK--------KHLLGWQL 625
+H N++RL G + LI EY V + L FD + + L +
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 130
Query: 626 RVRIIDGIAQDQHM------NPKISDFGMARMFGGDELQGNTKR---IVGTYGYMSPEYA 676
R+I + +++ KI+DFG + + + R + GT Y+ PE
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTTLCGTLDYLPPEXI 183
Query: 677 LEGVFSVKSDVFSFGVLMLEILSSK 701
K D++S GVL E L K
Sbjct: 184 EGRXHDEKVDLWSLGVLCYEFLVGK 208
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 86/206 (41%), Gaps = 35/206 (16%)
Query: 523 ATENFSIQSKLGEGGFGPVYKGR-----LLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAK 577
A E+F I LG+G FG VY R + +V K ++G + + E+ + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSH 64
Query: 578 LQHRNLVRLLGCCIEQGEKILIYEYM----VNKSLDVF-LFDPTK--------KHLLGWQ 624
L+H N++RL G + LI EY V + L FD + + L +
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 124
Query: 625 LRVRIIDGIAQDQHM------NPKISDFGMARMFGGDELQGNTKR---IVGTYGYMSPEY 675
R+I + +++ KI+DFG + + + R + GT Y+ PE
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTXLCGTLDYLPPEM 177
Query: 676 ALEGVFSVKSDVFSFGVLMLEILSSK 701
+ K D++S GVL E L K
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 86/206 (41%), Gaps = 35/206 (16%)
Query: 523 ATENFSIQSKLGEGGFGPVYKGR-----LLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAK 577
A E+F I LG+G FG VY R + +V K ++G + + E+ + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSH 67
Query: 578 LQHRNLVRLLGCCIEQGEKILIYEYM----VNKSLDVF-LFDPTK--------KHLLGWQ 624
L+H N++RL G + LI EY V + L FD + + L +
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 127
Query: 625 LRVRIIDGIAQDQHM------NPKISDFGMARMFGGDELQGNTKR---IVGTYGYMSPEY 675
R+I + +++ KI+DFG + + + R + GT Y+ PE
Sbjct: 128 HSKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTTLCGTLDYLPPEM 180
Query: 676 ALEGVFSVKSDVFSFGVLMLEILSSK 701
+ K D++S GVL E L K
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 94/203 (46%), Gaps = 29/203 (14%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQE-VAVKRLS-NQSGQGLKEFK-NEMMLIAKLQHR 581
+ + K+GEG +G V+K + E VA+KR+ + +G+ E+ L+ +L+H+
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61
Query: 582 NLVRLLGCCIEQGEKILIYEYM----------VNKSLD-----VFLFDPTKKHLLGWQLR 626
N+VRL + L++E+ N LD FLF K LG+
Sbjct: 62 NIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKG--LGFCHS 119
Query: 627 VRIIDGIAQDQHM------NPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEG- 679
++ + Q++ K+++FG+AR FG ++ + +V T Y P+
Sbjct: 120 RNVLHRDLKPQNLLINRNGELKLANFGLARAFGI-PVRCYSAEVV-TLWYRPPDVLFGAK 177
Query: 680 VFSVKSDVFSFGVLMLEILSSKK 702
++S D++S G + E+ ++ +
Sbjct: 178 LYSTSIDMWSAGCIFAELANAGR 200
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 83/203 (40%), Gaps = 29/203 (14%)
Query: 523 ATENFSIQSKLGEGGFGPVYKGR-----LLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAK 577
A E+F I LG+G FG VY R + +V K ++G + + E+ + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSH 64
Query: 578 LQHRNLVRLLGCCIEQGEKILIYEYM----VNKSLDVF-LFDPTK--------KHLLGWQ 624
L+H N++RL G + LI EY V + L FD + + L +
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 124
Query: 625 LRVRIIDGIAQDQHM------NPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALE 678
R+I + +++ KI+DFG + + GT Y+ PE
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLCGTLDYLPPEMIEG 180
Query: 679 GVFSVKSDVFSFGVLMLEILSSK 701
+ K D++S GVL E L K
Sbjct: 181 RMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 89/205 (43%), Gaps = 33/205 (16%)
Query: 523 ATENFSIQSKLGEGGFGPVYKGRLLNGQEV-AVKRL--SNQSGQGLK-EFKNEMMLIAKL 578
A E+F I LG+G FG VY R + + A+K L + G++ + + E+ + + L
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 579 QHRNLVRLLGCCIEQGEKILIYEYM----VNKSLDVF-LFDPTK--------KHLLGWQL 625
+H N++RL G + LI EY V + L FD + + L +
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 129
Query: 626 RVRIIDGIAQDQHM------NPKISDFGMARMFGGDELQGNTKR---IVGTYGYMSPEYA 676
R+I + +++ KI+DFG + + + R + GT Y+ PE
Sbjct: 130 SKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTTLCGTLDYLPPEMI 182
Query: 677 LEGVFSVKSDVFSFGVLMLEILSSK 701
+ K D++S GVL E L K
Sbjct: 183 EGRMHDEKVDLWSLGVLCYEFLVGK 207
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 90/210 (42%), Gaps = 33/210 (15%)
Query: 519 SVTAATE-----NFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRL--SNQSGQGLKEFKN 570
S T+A E N+ + +G+G F V R +L G+EVAV+ + + + L++
Sbjct: 3 SATSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFR 62
Query: 571 EMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRII 630
E+ ++ L H N+V+L + L+ EY + +L + + + R I
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQI 122
Query: 631 DGIAQ-------------------DQHMNPKISDFGMARMFG-GDELQGNTKRIVGTYGY 670
Q D MN KI+DFG + F G++L G+ Y
Sbjct: 123 VSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT----FCGSPPY 178
Query: 671 MSPE-YALEGVFSVKSDVFSFGVLMLEILS 699
+PE + + + DV+S GV++ ++S
Sbjct: 179 AAPELFQGKKYDGPEVDVWSLGVILYTLVS 208
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 86/202 (42%), Gaps = 27/202 (13%)
Query: 523 ATENFSIQSKLGEGGFGPVYKGRLLNGQEV-AVKRL--SNQSGQGLK-EFKNEMMLIAKL 578
A E+F I LG+G FG VY R + + A+K L + G++ + + E+ + + L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 579 QHRNLVRLLGCCIEQGEKILIYEYM----VNKSLDVF-LFDPTK--------KHLLGWQL 625
+H N++RL G + LI EY V + L FD + + L +
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 126
Query: 626 RVRIIDGIAQDQHM------NPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEG 679
R+I + +++ KI+DFG + + GT Y+ PE
Sbjct: 127 SKRVIHRDIKPENLLLGSAGELKIADFG----WSCHAPSSRRTTLSGTLDYLPPEMIEGR 182
Query: 680 VFSVKSDVFSFGVLMLEILSSK 701
+ K D++S GVL E L K
Sbjct: 183 MHDEKVDLWSLGVLCYEFLVGK 204
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 83/203 (40%), Gaps = 29/203 (14%)
Query: 523 ATENFSIQSKLGEGGFGPVYKGR-----LLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAK 577
A E+F I LG+G FG VY R + +V K ++G + + E+ + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSH 67
Query: 578 LQHRNLVRLLGCCIEQGEKILIYEYM----VNKSLDVF-LFDPTK--------KHLLGWQ 624
L+H N++RL G + LI EY V + L FD + + L +
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 127
Query: 625 LRVRIIDGIAQDQHM------NPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALE 678
R+I + +++ KI+DFG + + GT Y+ PE
Sbjct: 128 HSKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLCGTLDYLPPEMIEG 183
Query: 679 GVFSVKSDVFSFGVLMLEILSSK 701
+ K D++S GVL E L K
Sbjct: 184 RMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 83/198 (41%), Gaps = 40/198 (20%)
Query: 533 LGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKN-EMMLIAKLQHRNLVRLLGCC 590
+G G FG VY+ +L + G+ VA+K++ K FKN E+ ++ KL H N+VRL
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 116
Query: 591 IEQGEKI------LIYEYMVNKSLDVFLFDPTKKHLLG--------WQLRVRII------ 630
GEK L+ +Y+ V K L +QL +
Sbjct: 117 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 176
Query: 631 ----DGIAQDQHMNP-----KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGV- 680
D Q+ ++P K+ DFG A+ E N I Y Y +PE
Sbjct: 177 ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSRY-YRAPELIFGATD 233
Query: 681 FSVKSDVFSFGVLMLEIL 698
++ DV+S G ++ E+L
Sbjct: 234 YTSSIDVWSAGCVLAELL 251
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 8/96 (8%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRL--------LNGQEVAVKRLSNQSGQGLKEFKNEMMLIA 576
E+ LG+G F ++KG L+ EV +K L + F +++
Sbjct: 8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMS 67
Query: 577 KLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFL 612
KL H++LV G C E IL+ E++ SLD +L
Sbjct: 68 KLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYL 103
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 83/198 (41%), Gaps = 40/198 (20%)
Query: 533 LGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKN-EMMLIAKLQHRNLVRLLGCC 590
+G G FG VY+ +L + G+ VA+K++ K FKN E+ ++ KL H N+VRL
Sbjct: 36 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 90
Query: 591 IEQGEKI------LIYEYMVNKSLDVFLFDPTKKHLLG--------WQLRVRII------ 630
GEK L+ +Y+ V K L +QL +
Sbjct: 91 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 150
Query: 631 ----DGIAQDQHMNP-----KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGV- 680
D Q+ ++P K+ DFG A+ E N I Y Y +PE
Sbjct: 151 ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSRY-YRAPELIFGATD 207
Query: 681 FSVKSDVFSFGVLMLEIL 698
++ DV+S G ++ E+L
Sbjct: 208 YTSSIDVWSAGCVLAELL 225
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 83/198 (41%), Gaps = 40/198 (20%)
Query: 533 LGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKN-EMMLIAKLQHRNLVRLLGCC 590
+G G FG VY+ +L + G+ VA+K++ K FKN E+ ++ KL H N+VRL
Sbjct: 64 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 118
Query: 591 IEQGEKI------LIYEYMVNKSLDVFLFDPTKKHLLG--------WQLRVRII------ 630
GEK L+ +Y+ V K L +QL +
Sbjct: 119 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 178
Query: 631 ----DGIAQDQHMNP-----KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGV- 680
D Q+ ++P K+ DFG A+ E N I Y Y +PE
Sbjct: 179 ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSRY-YRAPELIFGATD 235
Query: 681 FSVKSDVFSFGVLMLEIL 698
++ DV+S G ++ E+L
Sbjct: 236 YTSSIDVWSAGCVLAELL 253
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 38/66 (57%), Gaps = 7/66 (10%)
Query: 533 LGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKN-EMMLIAKLQHRNLVRLLGCC 590
+G G FG VY+ +L + G+ VA+K++ K FKN E+ ++ KL H N+VRL
Sbjct: 33 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 87
Query: 591 IEQGEK 596
GEK
Sbjct: 88 YSSGEK 93
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 70/150 (46%), Gaps = 27/150 (18%)
Query: 525 ENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVK--RLSNQSGQGLKEFKNEMMLIAKLQHR 581
E + KLGEG + VYKG+ L VA+K RL ++ G + E+ L+ L+H
Sbjct: 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIR-EVSLLKDLKHA 60
Query: 582 NLVRLLGCCIEQGEKILIYEYM---VNKSLD------------VFLFDPTKKHLLGWQLR 626
N+V L + L++EY+ + + LD +FLF + L + R
Sbjct: 61 NIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRG--LAYCHR 118
Query: 627 VRIIDGIAQDQHM------NPKISDFGMAR 650
+++ + Q++ K++DFG+AR
Sbjct: 119 QKVLHRDLKPQNLLINERGELKLADFGLAR 148
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 87/202 (43%), Gaps = 29/202 (14%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNG--------QEVAVKRLSNQSGQGLKEFKNEMMLIA 576
E F + LG+GG+G V++ R + G +V K + ++ + K E ++
Sbjct: 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILE 76
Query: 577 KLQHRNLVRLLGCCIEQGEKILIYEYMVNKSL-------DVFLFDPTKKHL------LGW 623
+++H +V L+ G+ LI EY+ L +F+ D +L LG
Sbjct: 77 EVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGH 136
Query: 624 QLRVRII------DGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYAL 677
+ II + I + + K++DFG+ + D T GT YM+PE +
Sbjct: 137 LHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTV--THXFCGTIEYMAPEILM 194
Query: 678 EGVFSVKSDVFSFGVLMLEILS 699
+ D +S G LM ++L+
Sbjct: 195 RSGHNRAVDWWSLGALMYDMLT 216
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 83/198 (41%), Gaps = 40/198 (20%)
Query: 533 LGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKN-EMMLIAKLQHRNLVRLLGCC 590
+G G FG VY+ +L + G+ VA+K++ K FKN E+ ++ KL H N+VRL
Sbjct: 66 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 120
Query: 591 IEQGEKI------LIYEYMVNKSLDVFLFDPTKKHLLG--------WQLRVRII------ 630
GEK L+ +Y+ V K L +QL +
Sbjct: 121 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 180
Query: 631 ----DGIAQDQHMNP-----KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGV- 680
D Q+ ++P K+ DFG A+ E N I Y Y +PE
Sbjct: 181 ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSRY-YRAPELIFGATD 237
Query: 681 FSVKSDVFSFGVLMLEIL 698
++ DV+S G ++ E+L
Sbjct: 238 YTSSIDVWSAGCVLAELL 255
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 90/196 (45%), Gaps = 28/196 (14%)
Query: 525 ENFSIQSKLGEGGFGPVYK-GRLLNGQEVAVKRLSNQSGQGLK-EFKNEMMLIAKLQHRN 582
++F S+LG G G V+K +G +A K + + ++ + E+ ++ +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 583 LVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTK--KHLLGWQLRVRIIDGIA--QDQH 638
+V G GE + E+M SLD L + + +LG ++ + +I G+ +++H
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-KVSIAVIKGLTYLREKH 124
Query: 639 ------MNP-----------KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVF 681
+ P K+ DFG++ G + VGT YMSPE +
Sbjct: 125 KIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSPERLQGTHY 180
Query: 682 SVKSDVFSFGVLMLEI 697
SV+SD++S G+ ++E+
Sbjct: 181 SVQSDIWSMGLSLVEM 196
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 40/66 (60%), Gaps = 7/66 (10%)
Query: 533 LGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKN-EMMLIAKLQHRNLVRLLGCC 590
+G G FG VY+ +L + G+ VA+K++ QG K FKN E+ ++ KL H N+VRL
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVL----QG-KAFKNRELQIMRKLDHCNIVRLRYFF 82
Query: 591 IEQGEK 596
GEK
Sbjct: 83 YSSGEK 88
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 38/66 (57%), Gaps = 7/66 (10%)
Query: 533 LGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKN-EMMLIAKLQHRNLVRLLGCC 590
+G G FG VY+ +L + G+ VA+K++ K FKN E+ ++ KL H N+VRL
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 82
Query: 591 IEQGEK 596
GEK
Sbjct: 83 YSSGEK 88
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 38/66 (57%), Gaps = 7/66 (10%)
Query: 533 LGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKN-EMMLIAKLQHRNLVRLLGCC 590
+G G FG VY+ +L + G+ VA+K++ K FKN E+ ++ KL H N+VRL
Sbjct: 41 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 95
Query: 591 IEQGEK 596
GEK
Sbjct: 96 YSSGEK 101
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 38/66 (57%), Gaps = 7/66 (10%)
Query: 533 LGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKN-EMMLIAKLQHRNLVRLLGCC 590
+G G FG VY+ +L + G+ VA+K++ K FKN E+ ++ KL H N+VRL
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 94
Query: 591 IEQGEK 596
GEK
Sbjct: 95 YSSGEK 100
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 40/66 (60%), Gaps = 7/66 (10%)
Query: 533 LGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKN-EMMLIAKLQHRNLVRLLGCC 590
+G G FG VY+ +L + G+ VA+K++ QG K FKN E+ ++ KL H N+VRL
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVL----QG-KAFKNRELQIMRKLDHCNIVRLRYFF 82
Query: 591 IEQGEK 596
GEK
Sbjct: 83 YSSGEK 88
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 38/66 (57%), Gaps = 7/66 (10%)
Query: 533 LGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKN-EMMLIAKLQHRNLVRLLGCC 590
+G G FG VY+ +L + G+ VA+K++ K FKN E+ ++ KL H N+VRL
Sbjct: 47 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 101
Query: 591 IEQGEK 596
GEK
Sbjct: 102 YSSGEK 107
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 38/66 (57%), Gaps = 7/66 (10%)
Query: 533 LGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKN-EMMLIAKLQHRNLVRLLGCC 590
+G G FG VY+ +L + G+ VA+K++ K FKN E+ ++ KL H N+VRL
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 82
Query: 591 IEQGEK 596
GEK
Sbjct: 83 YSSGEK 88
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 38/66 (57%), Gaps = 7/66 (10%)
Query: 533 LGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKN-EMMLIAKLQHRNLVRLLGCC 590
+G G FG VY+ +L + G+ VA+K++ K FKN E+ ++ KL H N+VRL
Sbjct: 107 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 161
Query: 591 IEQGEK 596
GEK
Sbjct: 162 YSSGEK 167
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 38/66 (57%), Gaps = 7/66 (10%)
Query: 533 LGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKN-EMMLIAKLQHRNLVRLLGCC 590
+G G FG VY+ +L + G+ VA+K++ K FKN E+ ++ KL H N+VRL
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 82
Query: 591 IEQGEK 596
GEK
Sbjct: 83 YSSGEK 88
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 40/66 (60%), Gaps = 7/66 (10%)
Query: 533 LGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKN-EMMLIAKLQHRNLVRLLGCC 590
+G G FG VY+ +L + G+ VA+K++ QG K FKN E+ ++ KL H N+VRL
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVL----QG-KAFKNRELQIMRKLDHCNIVRLRYFF 82
Query: 591 IEQGEK 596
GEK
Sbjct: 83 YSSGEK 88
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 38/66 (57%), Gaps = 7/66 (10%)
Query: 533 LGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKN-EMMLIAKLQHRNLVRLLGCC 590
+G G FG VY+ +L + G+ VA+K++ K FKN E+ ++ KL H N+VRL
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 82
Query: 591 IEQGEK 596
GEK
Sbjct: 83 YSSGEK 88
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 83/198 (41%), Gaps = 40/198 (20%)
Query: 533 LGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKN-EMMLIAKLQHRNLVRLLGCC 590
+G G FG VY+ +L + G+ VA+K++ K FKN E+ ++ KL H N+VRL
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 94
Query: 591 IEQGEKI------LIYEYMVNKSLDVFLFDPTKKHLLG--------WQLRVRII------ 630
GEK L+ +Y+ V K L +QL +
Sbjct: 95 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG 154
Query: 631 ----DGIAQDQHMNP-----KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGV- 680
D Q+ ++P K+ DFG A+ E N I Y Y +PE
Sbjct: 155 ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSRY-YRAPELIFGATD 211
Query: 681 FSVKSDVFSFGVLMLEIL 698
++ DV+S G ++ E+L
Sbjct: 212 YTSSIDVWSAGCVLAELL 229
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 38/66 (57%), Gaps = 7/66 (10%)
Query: 533 LGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKN-EMMLIAKLQHRNLVRLLGCC 590
+G G FG VY+ +L + G+ VA+K++ K FKN E+ ++ KL H N+VRL
Sbjct: 29 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 83
Query: 591 IEQGEK 596
GEK
Sbjct: 84 YSSGEK 89
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 38/66 (57%), Gaps = 7/66 (10%)
Query: 533 LGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKN-EMMLIAKLQHRNLVRLLGCC 590
+G G FG VY+ +L + G+ VA+K++ K FKN E+ ++ KL H N+VRL
Sbjct: 32 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 86
Query: 591 IEQGEK 596
GEK
Sbjct: 87 YSSGEK 92
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 90/196 (45%), Gaps = 28/196 (14%)
Query: 525 ENFSIQSKLGEGGFGPVYK-GRLLNGQEVAVKRLSNQSGQGLK-EFKNEMMLIAKLQHRN 582
++F S+LG G G V+K +G +A K + + ++ + E+ ++ +
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 127
Query: 583 LVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTK--KHLLGWQLRVRIIDGIA--QDQH 638
+V G GE + E+M SLD L + + +LG ++ + +I G+ +++H
Sbjct: 128 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-KVSIAVIKGLTYLREKH 186
Query: 639 ------MNP-----------KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVF 681
+ P K+ DFG++ G + VGT YMSPE +
Sbjct: 187 KIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSPERLQGTHY 242
Query: 682 SVKSDVFSFGVLMLEI 697
SV+SD++S G+ ++E+
Sbjct: 243 SVQSDIWSMGLSLVEM 258
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 90/196 (45%), Gaps = 28/196 (14%)
Query: 525 ENFSIQSKLGEGGFGPVYK-GRLLNGQEVAVKRLSNQSGQGLK-EFKNEMMLIAKLQHRN 582
++F S+LG G G V+K +G +A K + + ++ + E+ ++ +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 583 LVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTK--KHLLGWQLRVRIIDGIA--QDQH 638
+V G GE + E+M SLD L + + +LG ++ + +I G+ +++H
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-KVSIAVIKGLTYLREKH 124
Query: 639 ------MNP-----------KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVF 681
+ P K+ DFG++ G + VGT YMSPE +
Sbjct: 125 KIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSPERLQGTHY 180
Query: 682 SVKSDVFSFGVLMLEI 697
SV+SD++S G+ ++E+
Sbjct: 181 SVQSDIWSMGLSLVEM 196
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 40.4 bits (93), Expect = 0.004, Method: Composition-based stats.
Identities = 54/205 (26%), Positives = 90/205 (43%), Gaps = 33/205 (16%)
Query: 523 ATENFSIQSKLGEGGFGPVYKGRLLNGQEV-AVKRL--SNQSGQGLK-EFKNEMMLIAKL 578
A E+F I LG+G FG VY R + + A+K L + G++ + + E+ + + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 579 QHRNLVRLLGCCIEQGEKILIYEY----MVNKSLD-VFLFDPTKK--------HLLGWQL 625
+H N++RL G + LI EY V + L + FD + + L +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 626 RVRIIDGIAQDQHM------NPKISDFGMARMFGGDELQGNTKR---IVGTYGYMSPEYA 676
R+I + +++ KI+DFG + + + R + GT Y+ PE
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRAALCGTLDYLPPEMI 178
Query: 677 LEGVFSVKSDVFSFGVLMLEILSSK 701
+ K D++S GVL E L K
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 82/197 (41%), Gaps = 26/197 (13%)
Query: 526 NFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRL--SNQSGQGLKEFKNEMMLIAKLQHRN 582
N+ + +G+G F V R +L G+EVA+K + + + L++ E+ ++ L H N
Sbjct: 16 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75
Query: 583 LVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ------- 635
+V+L + LI EY + +L + + + R I Q
Sbjct: 76 IVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRI 135
Query: 636 ------------DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPE-YALEGVFS 682
D MN KI+DFG + F + G G Y +PE + +
Sbjct: 136 VHRDLKAENLLLDADMNIKIADFGFSNEF---TVGGKLDAFCGAPPYAAPELFQGKKYDG 192
Query: 683 VKSDVFSFGVLMLEILS 699
+ DV+S GV++ ++S
Sbjct: 193 PEVDVWSLGVILYTLVS 209
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 87/210 (41%), Gaps = 33/210 (15%)
Query: 519 SVTAATE-----NFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRL--SNQSGQGLKEFKN 570
S T+A E N+ + +G+G F V R +L G+EVAVK + + + L++
Sbjct: 3 SATSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR 62
Query: 571 EMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRII 630
E+ + L H N+V+L + L+ EY + +L + + + R I
Sbjct: 63 EVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQI 122
Query: 631 DGIAQ-------------------DQHMNPKISDFGMARMFG-GDELQGNTKRIVGTYGY 670
Q D N KI+DFG + F G++L G Y
Sbjct: 123 VSAVQYCHQKFIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDA----FCGAPPY 178
Query: 671 MSPE-YALEGVFSVKSDVFSFGVLMLEILS 699
+PE + + + DV+S GV++ ++S
Sbjct: 179 AAPELFQGKKYDGPEVDVWSLGVILYTLVS 208
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 90/196 (45%), Gaps = 28/196 (14%)
Query: 525 ENFSIQSKLGEGGFGPVYK-GRLLNGQEVAVKRLSNQSGQGLK-EFKNEMMLIAKLQHRN 582
++F S+LG G G V+K +G +A K + + ++ + E+ ++ +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 583 LVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTK--KHLLGWQLRVRIIDGIA--QDQH 638
+V G GE + E+M SLD L + + +LG ++ + +I G+ +++H
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-KVSIAVIKGLTYLREKH 124
Query: 639 ------MNP-----------KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVF 681
+ P K+ DFG++ G + VGT YMSPE +
Sbjct: 125 KIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSPERLQGTHY 180
Query: 682 SVKSDVFSFGVLMLEI 697
SV+SD++S G+ ++E+
Sbjct: 181 SVQSDIWSMGLSLVEM 196
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 73/153 (47%), Gaps = 25/153 (16%)
Query: 642 KISDFGMARMF--GGDELQGNTKR-IVGTYGYMSPEYALEGV--FSVKSDVFSFGVLMLE 696
+I+DFG++ GGD + ++ VGT +M+PE +E V + K+D++SFG+ +E
Sbjct: 161 QIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPE-VMEQVRGYDFKADIWSFGITAIE 219
Query: 697 ILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVS-LPMLVRY----INVA 751
+ TG + + +ND P L+ V ML +Y +
Sbjct: 220 L-----ATGAAPYHKYPPMKVLMLTLQND------PPSLETGVQDKEMLKKYGKSFRKMI 268
Query: 752 LLCVQENAEDRPTMSDVVSMINNELFNLPSPKE 784
LC+Q++ E RPT ++ ++ ++ F KE
Sbjct: 269 SLCLQKDPEKRPTAAE---LLRHKFFQKAKNKE 298
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 83/197 (42%), Gaps = 26/197 (13%)
Query: 526 NFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRL--SNQSGQGLKEFKNEMMLIAKLQHRN 582
N+ + +G+G F V R +L G+EVA+K + + + L++ E+ ++ L H N
Sbjct: 13 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 72
Query: 583 LVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ------- 635
+V+L + LI EY + +L + + + R I Q
Sbjct: 73 IVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRI 132
Query: 636 ------------DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPE-YALEGVFS 682
D MN KI+DFG + F + G G+ Y +PE + +
Sbjct: 133 VHRDLKAENLLLDADMNIKIADFGFSNEF---TVGGKLDTFCGSPPYAAPELFQGKKYDG 189
Query: 683 VKSDVFSFGVLMLEILS 699
+ DV+S GV++ ++S
Sbjct: 190 PEVDVWSLGVILYTLVS 206
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 85/205 (41%), Gaps = 28/205 (13%)
Query: 518 ASVTAATENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFK---NEMM 573
A TA + F LG G FG V + + G A+K L Q LKE + NE
Sbjct: 34 AQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKR 93
Query: 574 LIAKLQHRNLVRLLGCCIEQGEKILIYEY-----MVNKSLDVFLF-DPTKK--------- 618
++ + LV+L + ++ EY M + + F +P +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT 153
Query: 619 ----HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPE 674
H L R + + DQ K++DFG+A+ ++G T + GT Y++PE
Sbjct: 154 FEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGLAK-----RVKGRTWXLCGTPEYLAPE 208
Query: 675 YALEGVFSVKSDVFSFGVLMLEILS 699
L ++ D ++ GVL+ E+ +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAA 233
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 90/196 (45%), Gaps = 28/196 (14%)
Query: 525 ENFSIQSKLGEGGFGPVYK-GRLLNGQEVAVKRLSNQSGQGLK-EFKNEMMLIAKLQHRN 582
++F S+LG G G V+K +G +A K + + ++ + E+ ++ +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 583 LVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTK--KHLLGWQLRVRIIDGIA--QDQH 638
+V G GE + E+M SLD L + + +LG ++ + +I G+ +++H
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-KVSIAVIKGLTYLREKH 124
Query: 639 ------MNP-----------KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVF 681
+ P K+ DFG++ G + VGT YMSPE +
Sbjct: 125 KIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSPERLQGTHY 180
Query: 682 SVKSDVFSFGVLMLEI 697
SV+SD++S G+ ++E+
Sbjct: 181 SVQSDIWSMGLSLVEM 196
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 90/196 (45%), Gaps = 28/196 (14%)
Query: 525 ENFSIQSKLGEGGFGPVYK-GRLLNGQEVAVKRLSNQSGQGLK-EFKNEMMLIAKLQHRN 582
++F S+LG G G V+K +G +A K + + ++ + E+ ++ +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 583 LVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTK--KHLLGWQLRVRIIDGIA--QDQH 638
+V G GE + E+M SLD L + + +LG ++ + +I G+ +++H
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-KVSIAVIKGLTYLREKH 124
Query: 639 ------MNP-----------KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVF 681
+ P K+ DFG++ G + VGT YMSPE +
Sbjct: 125 KIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSPERLQGTHY 180
Query: 682 SVKSDVFSFGVLMLEI 697
SV+SD++S G+ ++E+
Sbjct: 181 SVQSDIWSMGLSLVEM 196
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 89/205 (43%), Gaps = 33/205 (16%)
Query: 523 ATENFSIQSKLGEGGFGPVYKGRLLNGQEV-AVKRL--SNQSGQGLK-EFKNEMMLIAKL 578
A E+F I LG+G FG VY R + + A+K L + G++ + + E+ + + L
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 579 QHRNLVRLLGCCIEQGEKILIYEYM----VNKSLDVF-LFDPTK--------KHLLGWQL 625
+H N++RL G + LI EY V + L FD + + L +
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 127
Query: 626 RVRIIDGIAQDQHM------NPKISDFGMARMFGGDELQGNTKR---IVGTYGYMSPEYA 676
R+I + +++ KI++FG + + + R + GT Y+ PE
Sbjct: 128 SKRVIHRDIKPENLLLGSAGELKIANFGWS-------VHAPSSRRTTLCGTLDYLPPEMI 180
Query: 677 LEGVFSVKSDVFSFGVLMLEILSSK 701
+ K D++S GVL E L K
Sbjct: 181 EGRMHDEKVDLWSLGVLCYEFLVGK 205
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 82/192 (42%), Gaps = 27/192 (14%)
Query: 527 FSIQSKLGEGGFGPVYKG-RLLNGQEVAVKRL-SNQSGQGLKEFKNEMMLIAKLQHRNLV 584
+ + +G GGF V +L G+ VA+K + N G L K E+ + L+H+++
Sbjct: 12 YELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHIC 71
Query: 585 RLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRV---RIIDGIAQ------ 635
+L + ++ EY L F + ++ L + RV +I+ +A
Sbjct: 72 QLYHVLETANKIFMVLEYCPGGEL--FDYIISQDRLSEEETRVVFRQIVSAVAYVHSQGY 129
Query: 636 ------------DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYAL-EGVFS 682
D++ K+ DFG+ G++ + + G+ Y +PE +
Sbjct: 130 AHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNK-DYHLQTCCGSLAYAAPELIQGKSYLG 188
Query: 683 VKSDVFSFGVLM 694
++DV+S G+L+
Sbjct: 189 SEADVWSMGILL 200
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 40.0 bits (92), Expect = 0.005, Method: Composition-based stats.
Identities = 53/206 (25%), Positives = 87/206 (42%), Gaps = 35/206 (16%)
Query: 523 ATENFSIQSKLGEGGFGPVYKGR-----LLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAK 577
A E+F I LG+G FG VY R + +V K ++G + + E+ + +
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVE-HQLRREVEIQSH 61
Query: 578 LQHRNLVRLLGCCIEQGEKILIYEY----MVNKSLD-VFLFDPTKK--------HLLGWQ 624
L+H N++RL G + LI EY V + L + FD + + L +
Sbjct: 62 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 121
Query: 625 LRVRIIDGIAQDQHM------NPKISDFGMARMFGGDELQGNTKR---IVGTYGYMSPEY 675
R+I + +++ KI+DFG + + + R + GT Y+ PE
Sbjct: 122 HSKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTTLCGTLDYLPPEM 174
Query: 676 ALEGVFSVKSDVFSFGVLMLEILSSK 701
+ K D++S GVL E L K
Sbjct: 175 IEGRMHDEKVDLWSLGVLCYEFLVGK 200
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 68/138 (49%), Gaps = 22/138 (15%)
Query: 642 KISDFGMARMF--GGDELQGNTKR-IVGTYGYMSPEYALEGV--FSVKSDVFSFGVLMLE 696
+I+DFG++ GGD + ++ VGT +M+PE +E V + K+D++SFG+ +E
Sbjct: 156 QIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPE-VMEQVRGYDFKADIWSFGITAIE 214
Query: 697 ILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVS-LPMLVRY----INVA 751
+ TG + + +ND P L+ V ML +Y +
Sbjct: 215 L-----ATGAAPYHKYPPMKVLMLTLQND------PPSLETGVQDKEMLKKYGKSFRKMI 263
Query: 752 LLCVQENAEDRPTMSDVV 769
LC+Q++ E RPT ++++
Sbjct: 264 SLCLQKDPEKRPTAAELL 281
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 636 DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLML 695
D N +ISD G+A Q TK GT G+M+PE L + D F+ GV +
Sbjct: 323 DDDGNVRISDLGLAVELKAG--QTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLY 380
Query: 696 EILSSK 701
E+++++
Sbjct: 381 EMIAAR 386
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 80/209 (38%), Gaps = 26/209 (12%)
Query: 525 ENFSIQSKLGEGGFGPVYK-GRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNL 583
+++ I +LG G FG V++ G A K + + + E+ ++ L+H L
Sbjct: 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 216
Query: 584 VRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKK--HLLGWQLRVRIIDGIAQDQHMN- 640
V L + E ++IYE+M L + D K + ++ G+ N
Sbjct: 217 VNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNY 276
Query: 641 ------P-------------KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVF 681
P K+ DFG+ + + + K GT + +PE A
Sbjct: 277 VHLDLKPENIMFTTKRSNELKLIDFGLTAHL---DPKQSVKVTTGTAEFAAPEVAEGKPV 333
Query: 682 SVKSDVFSFGVLMLEILSSKKNTGVYNTD 710
+D++S GVL +LS G N D
Sbjct: 334 GYYTDMWSVGVLSYILLSGLSPFGGENDD 362
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 636 DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLML 695
D N +ISD G+A Q TK GT G+M+PE L + D F+ GV +
Sbjct: 323 DDDGNVRISDLGLAVELKAG--QTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLY 380
Query: 696 EILSSK 701
E+++++
Sbjct: 381 EMIAAR 386
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 636 DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLML 695
D N +ISD G+A Q TK GT G+M+PE L + D F+ GV +
Sbjct: 323 DDDGNVRISDLGLAVELKAG--QTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLY 380
Query: 696 EILSSK 701
E+++++
Sbjct: 381 EMIAAR 386
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 90/196 (45%), Gaps = 28/196 (14%)
Query: 525 ENFSIQSKLGEGGFGPVYK-GRLLNGQEVAVKRLSNQSGQGLK-EFKNEMMLIAKLQHRN 582
++F S+LG G G V+K +G +A K + + ++ + E+ ++ +
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 68
Query: 583 LVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTK--KHLLGWQLRVRIIDGIA--QDQH 638
+V G GE + E+M SLD L + + +LG ++ + +I G+ +++H
Sbjct: 69 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-KVSIAVIKGLTYLREKH 127
Query: 639 ------MNP-----------KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVF 681
+ P K+ DFG++ G + VGT YMSPE +
Sbjct: 128 KIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDEMANEFVGTRSYMSPERLQGTHY 183
Query: 682 SVKSDVFSFGVLMLEI 697
SV+SD++S G+ ++E+
Sbjct: 184 SVQSDIWSMGLSLVEM 199
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 636 DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLML 695
D N +ISD G+A Q TK GT G+M+PE L + D F+ GV +
Sbjct: 323 DDDGNVRISDLGLAVELKAG--QTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLY 380
Query: 696 EILSSK 701
E+++++
Sbjct: 381 EMIAAR 386
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 85/197 (43%), Gaps = 31/197 (15%)
Query: 531 SKLGEGGFGPVYKG-RLLNGQEVAVKRLSN--QSGQGLKEFKNEMMLIAKLQHRNLVRLL 587
+ +G G +G V +G++VA+K+LS QS K E++L+ +QH N++ LL
Sbjct: 30 THVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLL 89
Query: 588 GCCIEQGEKILIYE-YMVNKSLDVFL-------FDPTKKHLLGWQL-------------- 625
Y+ Y+V + L F K L +Q+
Sbjct: 90 DVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAGVVH 149
Query: 626 RVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGV-FSVK 684
R +A ++ KI DFG+AR E+ G V T Y +PE L + ++
Sbjct: 150 RDLKPGNLAVNEDCELKILDFGLAR-HADAEMTG----YVVTRWYRAPEVILSWMHYNQT 204
Query: 685 SDVFSFGVLMLEILSSK 701
D++S G +M E+L+ K
Sbjct: 205 VDIWSVGCIMAEMLTGK 221
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 81/189 (42%), Gaps = 21/189 (11%)
Query: 532 KLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCC 590
K+GEG G V + + G+ VAVK++ + Q + NE++++ QH N+V +
Sbjct: 36 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 95
Query: 591 IEQGEKILIYEYMVNKSL-DVFLFDPTKK-----------------HLLGWQLRVRIIDG 632
+ E ++ E++ +L D+ + H G R D
Sbjct: 96 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDS 155
Query: 633 IAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGV 692
I K+SDFG + K +VGT +M+PE + + D++S G+
Sbjct: 156 ILLTHDGRVKLSDFGFCAQVSKE--VPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGI 213
Query: 693 LMLEILSSK 701
+++E++ +
Sbjct: 214 MVIEMVDGE 222
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 80/189 (42%), Gaps = 21/189 (11%)
Query: 532 KLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCC 590
K+GEG G V + + G+ VAVK++ + Q + NE++++ QH N+V +
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 86
Query: 591 IEQGEKILIYEYMVNKSLD------------------VFLFDPTKKHLLGWQLRVRIIDG 632
+ E ++ E++ +L L + H G R D
Sbjct: 87 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDS 146
Query: 633 IAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGV 692
I K+SDFG + K +VGT +M+PE + + D++S G+
Sbjct: 147 ILLTHDGRVKLSDFGFCAQVSKE--VPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGI 204
Query: 693 LMLEILSSK 701
+++E++ +
Sbjct: 205 MVIEMVDGE 213
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 86/196 (43%), Gaps = 29/196 (14%)
Query: 527 FSIQSKLGEGGFGPVYKGRLLNGQEV--AVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
+++++ +G G +G V K + G + A K++ + + FK E+ ++ L H N++
Sbjct: 11 YTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNII 69
Query: 585 RLLGCCIEQGEKILIYEYMVNKSL-DVFLFDPTKKHLLGWQLRVRIIDGIAQDQHMNP-- 641
RL + + L+ E L + + + ++ ++ +A +N
Sbjct: 70 RLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAH 129
Query: 642 -------------------KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFS 682
K+ DFG+A F ++ TK VGT Y+SP+ LEG++
Sbjct: 130 RDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMM-RTK--VGTPYYVSPQ-VLEGLYG 185
Query: 683 VKSDVFSFGVLMLEIL 698
+ D +S GV+M +L
Sbjct: 186 PECDEWSAGVMMYVLL 201
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 80/189 (42%), Gaps = 21/189 (11%)
Query: 532 KLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCC 590
K+GEG G V + + G+ VAVK++ + Q + NE++++ QH N+V +
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 90
Query: 591 IEQGEKILIYEYMVNKSLD------------------VFLFDPTKKHLLGWQLRVRIIDG 632
+ E ++ E++ +L L + H G R D
Sbjct: 91 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDS 150
Query: 633 IAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGV 692
I K+SDFG + K +VGT +M+PE + + D++S G+
Sbjct: 151 ILLTHDGRVKLSDFGFCAQVSKE--VPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGI 208
Query: 693 LMLEILSSK 701
+++E++ +
Sbjct: 209 MVIEMVDGE 217
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 80/209 (38%), Gaps = 26/209 (12%)
Query: 525 ENFSIQSKLGEGGFGPVYK-GRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNL 583
+++ I +LG G FG V++ G A K + + + E+ ++ L+H L
Sbjct: 51 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 110
Query: 584 VRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKK--HLLGWQLRVRIIDGIAQDQHMN- 640
V L + E ++IYE+M L + D K + ++ G+ N
Sbjct: 111 VNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNY 170
Query: 641 ------P-------------KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVF 681
P K+ DFG+ + + + K GT + +PE A
Sbjct: 171 VHLDLKPENIMFTTKRSNELKLIDFGLTAHL---DPKQSVKVTTGTAEFAAPEVAEGKPV 227
Query: 682 SVKSDVFSFGVLMLEILSSKKNTGVYNTD 710
+D++S GVL +LS G N D
Sbjct: 228 GYYTDMWSVGVLSYILLSGLSPFGGENDD 256
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 86/196 (43%), Gaps = 29/196 (14%)
Query: 527 FSIQSKLGEGGFGPVYKGRLLNGQEV--AVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
+++++ +G G +G V K + G + A K++ + + FK E+ ++ L H N++
Sbjct: 28 YTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNII 86
Query: 585 RLLGCCIEQGEKILIYEYMVNKSL-DVFLFDPTKKHLLGWQLRVRIIDGIAQDQHMNP-- 641
RL + + L+ E L + + + ++ ++ +A +N
Sbjct: 87 RLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAH 146
Query: 642 -------------------KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFS 682
K+ DFG+A F ++ TK VGT Y+SP+ LEG++
Sbjct: 147 RDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMM-RTK--VGTPYYVSPQ-VLEGLYG 202
Query: 683 VKSDVFSFGVLMLEIL 698
+ D +S GV+M +L
Sbjct: 203 PECDEWSAGVMMYVLL 218
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 90/196 (45%), Gaps = 28/196 (14%)
Query: 525 ENFSIQSKLGEGGFGPVYK-GRLLNGQEVAVKRLSNQSGQGLK-EFKNEMMLIAKLQHRN 582
++F S+LG G G V+K +G +A K + + ++ + E+ ++ +
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 92
Query: 583 LVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTK--KHLLGWQLRVRIIDGIA--QDQH 638
+V G GE + E+M SLD L + + +LG ++ + +I G+ +++H
Sbjct: 93 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-KVSIAVIKGLTYLREKH 151
Query: 639 ------MNP-----------KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVF 681
+ P K+ DFG++ G + VGT YMSPE +
Sbjct: 152 KIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSPERLQGTHY 207
Query: 682 SVKSDVFSFGVLMLEI 697
SV+SD++S G+ ++E+
Sbjct: 208 SVQSDIWSMGLSLVEM 223
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 81/189 (42%), Gaps = 21/189 (11%)
Query: 532 KLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCC 590
K+GEG G V + + G+ VAVK++ + Q + NE++++ QH N+V +
Sbjct: 38 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 97
Query: 591 IEQGEKILIYEYMVNKSL-DVFLFDPTKK-----------------HLLGWQLRVRIIDG 632
+ E ++ E++ +L D+ + H G R D
Sbjct: 98 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDS 157
Query: 633 IAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGV 692
I K+SDFG + K +VGT +M+PE + + D++S G+
Sbjct: 158 ILLTHDGRVKLSDFGFCAQVSKE--VPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGI 215
Query: 693 LMLEILSSK 701
+++E++ +
Sbjct: 216 MVIEMVDGE 224
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 80/186 (43%), Gaps = 21/186 (11%)
Query: 532 KLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCC 590
K+GEG G V + + G+ VAVK++ + Q + NE++++ QH N+V +
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 217
Query: 591 IEQGEKILIYEYMVNKSL-DVFLFDPTKK-----------------HLLGWQLRVRIIDG 632
+ E ++ E++ +L D+ + H G R D
Sbjct: 218 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDS 277
Query: 633 IAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGV 692
I K+SDFG + K +VGT +M+PE + + D++S G+
Sbjct: 278 ILLTHDGRVKLSDFGFCAQVSKE--VPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGI 335
Query: 693 LMLEIL 698
+++E++
Sbjct: 336 MVIEMV 341
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 114/281 (40%), Gaps = 52/281 (18%)
Query: 524 TENFSIQSKLGEGGFGPVYKG-RLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRN 582
E+ ++G G +G V K +GQ +AVKR+ + + KE K +M + + +
Sbjct: 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDE--KEQKQLLMDLDVVMRSS 78
Query: 583 ----LVRLLGCCIEQGEKILIYEYMVNKSLDVF-------LFDPTKKHLLG--------- 622
+V+ G +G+ + E M + S D F L D + +LG
Sbjct: 79 DCPYIVQFYGALFREGDCWICMELM-STSFDKFYKYVYSVLDDVIPEEILGKITLATVKA 137
Query: 623 ---WQLRVRII------DGIAQDQHMNPKISDFGMARMFGGDELQGNTK-RIVGTYGYMS 672
+ ++II I D+ N K+ DFG++ G + K R G YM+
Sbjct: 138 LNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGIS----GQLVDSIAKTRDAGCRPYMA 193
Query: 673 PEY----ALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAH 728
PE A + V+SDV+S G+ + E+ + + +N+ + + K D
Sbjct: 194 PERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNS----VFDQLTQVVKGD--- 246
Query: 729 ELMDPVLQNEVSLPMLVRYINVALLCVQENAEDRPTMSDVV 769
P L N +IN LC+ ++ RP +++
Sbjct: 247 ---PPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELL 284
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 89/205 (43%), Gaps = 33/205 (16%)
Query: 523 ATENFSIQSKLGEGGFGPVYKGRLLNGQEV-AVKRL--SNQSGQGLK-EFKNEMMLIAKL 578
A E+F I LG+G FG VY R + + A+K L + G++ + + E+ + + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 579 QHRNLVRLLGCCIEQGEKILIYEYM----VNKSLDVF-LFDPTK--------KHLLGWQL 625
+H N++RL G + LI EY V + L FD + + L +
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 626 RVRIIDGIAQDQHM------NPKISDFGMARMFGGDELQGNTKR---IVGTYGYMSPEYA 676
R+I + +++ KI++FG + + + R + GT Y+ PE
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIANFGWS-------VHAPSSRRTTLCGTLDYLPPEMI 181
Query: 677 LEGVFSVKSDVFSFGVLMLEILSSK 701
+ K D++S GVL E L K
Sbjct: 182 EGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 85/197 (43%), Gaps = 31/197 (15%)
Query: 531 SKLGEGGFGPVYKG-RLLNGQEVAVKRLSN--QSGQGLKEFKNEMMLIAKLQHRNLVRLL 587
+ +G G +G V +G++VA+K+LS QS K E++L+ +QH N++ LL
Sbjct: 48 THVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLL 107
Query: 588 GCCIEQGEKILIYE-YMVNKSLDVFL-------FDPTKKHLLGWQL-------------- 625
Y+ Y+V + L F K L +Q+
Sbjct: 108 DVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAGVVH 167
Query: 626 RVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGV-FSVK 684
R +A ++ KI DFG+AR E+ G V T Y +PE L + ++
Sbjct: 168 RDLKPGNLAVNEDCELKILDFGLAR-HADAEMTG----YVVTRWYRAPEVILSWMHYNQT 222
Query: 685 SDVFSFGVLMLEILSSK 701
D++S G +M E+L+ K
Sbjct: 223 VDIWSVGCIMAEMLTGK 239
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 83/205 (40%), Gaps = 28/205 (13%)
Query: 518 ASVTAATENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFK---NEMM 573
A TA + F +G G FG V + + G A+K L Q LK+ + NE
Sbjct: 34 AQNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 574 LIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLF------DPTKK--------- 618
++ + LV+L + ++ EYM + L +P +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLT 153
Query: 619 ----HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPE 674
H L R + + DQ K++DFG A+ ++G T + GT Y++PE
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGTPEYLAPE 208
Query: 675 YALEGVFSVKSDVFSFGVLMLEILS 699
L ++ D ++ GVL+ E+ +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAA 233
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 116/273 (42%), Gaps = 52/273 (19%)
Query: 533 LGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMM-----LIAKLQHRNLVRLL 587
LG+GGF ++ + +EV ++ +S LK + E M + L H+++V
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLL-LKPHQREKMSMEISIHRSLAHQHVVGFH 107
Query: 588 GCCIEQGEKILIYEYMVNKSLDVF------LFDPTKKH-----LLGWQL--RVRIID--- 631
G + ++ E +SL L +P ++ +LG Q R R+I
Sbjct: 108 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 167
Query: 632 ---GIAQDQHMNPKISDFGMARMFGGDELQGNTKRIV-GTYGYMSPEYALEGVFSVKSDV 687
+ ++ + KI DFG+A E G K+++ GT Y++PE + S + DV
Sbjct: 168 KLGNLFLNEDLEVKIGDFGLATKV---EYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDV 224
Query: 688 FSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVRY 747
+S G +M +L K + T E + +NE S+P +
Sbjct: 225 WSIGCIMYTLLVGKPP---FETSCLK---------------ETYLRIKKNEYSIPKHINP 266
Query: 748 INVALL--CVQENAEDRPTMSDVVSMINNELFN 778
+ +L+ +Q + RPT+++ ++N+E F
Sbjct: 267 VAASLIQKMLQTDPTARPTINE---LLNDEFFT 296
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 34/62 (54%), Gaps = 7/62 (11%)
Query: 642 KISDFGMARMFGGDE----LQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEI 697
KISDFG+++ DE Q + K V Y +PE FS KSDV+SFGVLM E
Sbjct: 167 KISDFGLSKALRADENYYKAQTHGKWPVKWY---APECINYYKFSSKSDVWSFGVLMWEA 223
Query: 698 LS 699
S
Sbjct: 224 FS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 34/62 (54%), Gaps = 7/62 (11%)
Query: 642 KISDFGMARMFGGDE----LQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEI 697
KISDFG+++ DE Q + K V Y +PE FS KSDV+SFGVLM E
Sbjct: 167 KISDFGLSKALRADENYYKAQTHGKWPVKWY---APECINYYKFSSKSDVWSFGVLMWEA 223
Query: 698 LS 699
S
Sbjct: 224 FS 225
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 92/204 (45%), Gaps = 28/204 (13%)
Query: 525 ENFSIQSKLGEGGFGPVYK-GRLLNGQEVAVKRLSNQSGQGLK-EFKNEMMLIAKLQHRN 582
++F S+LG G G V+K +G +A K + + ++ + E+ ++ +
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 84
Query: 583 LVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTK--KHLLGWQLRVRIIDGIA--QDQH 638
+V G GE + E+M SLD L + + +LG ++ + +I G+ +++H
Sbjct: 85 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-KVSIAVIKGLTYLREKH 143
Query: 639 ------MNP-----------KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVF 681
+ P K+ DFG++ G + VGT YMSPE +
Sbjct: 144 KIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSPERLQGTHY 199
Query: 682 SVKSDVFSFGVLMLEILSSKKNTG 705
SV+SD++S G+ ++E+ + G
Sbjct: 200 SVQSDIWSMGLSLVEMAVGRYPIG 223
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
Query: 631 DGIAQDQHMNPKISDFGMA-RMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFS 689
+ I D H + +ISD G+A + G ++G VGT GYM+PE ++ D ++
Sbjct: 315 ENILLDDHGHIRISDLGLAVHVPEGQTIKGR----VGTVGYMAPEVVKNERYTFSPDWWA 370
Query: 690 FGVLMLEILSSK 701
G L+ E+++ +
Sbjct: 371 LGCLLYEMIAGQ 382
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 83/205 (40%), Gaps = 28/205 (13%)
Query: 518 ASVTAATENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFK---NEMM 573
A TA + F +G G FG V + + G A+K L Q LK+ + NE
Sbjct: 34 AQNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 574 LIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLF------DPTKK--------- 618
++ + LV+L + ++ EYM + L +P +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLT 153
Query: 619 ----HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPE 674
H L R + + DQ K++DFG A+ ++G T + GT Y++PE
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGTPEYLAPE 208
Query: 675 YALEGVFSVKSDVFSFGVLMLEILS 699
L ++ D ++ GVL+ E+ +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAA 233
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 87/200 (43%), Gaps = 33/200 (16%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEV-AVKRL--SNQSGQGLK-EFKNEMMLIAKLQH 580
E+F I LG+G FG VY R + + A+K L + G++ + + E+ + + L+H
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 581 RNLVRLLGCCIEQGEKILIYEYM----VNKSLDVF-LFDPTK--------KHLLGWQLRV 627
N++RL G + LI EY V + L FD + + L +
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSK 131
Query: 628 RIIDGIAQDQHM------NPKISDFGMARMFGGDELQGNTKR---IVGTYGYMSPEYALE 678
R+I + +++ KI+DFG + + + R + GT Y+ PE
Sbjct: 132 RVIHRDIKPENLLLGSNGELKIADFGWS-------VHAPSSRRDTLCGTLDYLPPEMIEG 184
Query: 679 GVFSVKSDVFSFGVLMLEIL 698
+ K D++S GVL E L
Sbjct: 185 RMHDEKVDLWSLGVLCYEFL 204
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 34/62 (54%), Gaps = 7/62 (11%)
Query: 642 KISDFGMARMFGGDE----LQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEI 697
KISDFG+++ DE Q + K V Y +PE FS KSDV+SFGVLM E
Sbjct: 165 KISDFGLSKALRADENYYKAQTHGKWPVKWY---APECINYYKFSSKSDVWSFGVLMWEA 221
Query: 698 LS 699
S
Sbjct: 222 FS 223
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 36/67 (53%), Gaps = 8/67 (11%)
Query: 637 QHMNPKISDFGMARMFGGDE----LQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGV 692
QH KISDFG+++ DE Q + K V Y +PE FS KSDV+SFGV
Sbjct: 143 QHY-AKISDFGLSKALRADENYYKAQTHGKWPVKWY---APECINYYKFSSKSDVWSFGV 198
Query: 693 LMLEILS 699
LM E S
Sbjct: 199 LMWEAFS 205
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 36/67 (53%), Gaps = 8/67 (11%)
Query: 637 QHMNPKISDFGMARMFGGDE----LQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGV 692
QH KISDFG+++ DE Q + K V Y +PE FS KSDV+SFGV
Sbjct: 147 QHY-AKISDFGLSKALRADENYYKAQTHGKWPVKWY---APECINYYKFSSKSDVWSFGV 202
Query: 693 LMLEILS 699
LM E S
Sbjct: 203 LMWEAFS 209
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 87/200 (43%), Gaps = 33/200 (16%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEV-AVKRL--SNQSGQGLK-EFKNEMMLIAKLQH 580
E+F I LG+G FG VY R + + A+K L + G++ + + E+ + + L+H
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 581 RNLVRLLGCCIEQGEKILIYEYM----VNKSLDVF-LFDPTK--------KHLLGWQLRV 627
N++RL G + LI EY V + L FD + + L +
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSK 131
Query: 628 RIIDGIAQDQHM------NPKISDFGMARMFGGDELQGNTKR---IVGTYGYMSPEYALE 678
R+I + +++ KI+DFG + + + R + GT Y+ PE
Sbjct: 132 RVIHRDIKPENLLLGSNGELKIADFGWS-------VHAPSSRRTTLCGTLDYLPPEMIEG 184
Query: 679 GVFSVKSDVFSFGVLMLEIL 698
+ K D++S GVL E L
Sbjct: 185 RMHDEKVDLWSLGVLCYEFL 204
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 36/67 (53%), Gaps = 8/67 (11%)
Query: 637 QHMNPKISDFGMARMFGGDE----LQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGV 692
QH KISDFG+++ DE Q + K V Y +PE FS KSDV+SFGV
Sbjct: 141 QHY-AKISDFGLSKALRADENYYKAQTHGKWPVKWY---APECINYYKFSSKSDVWSFGV 196
Query: 693 LMLEILS 699
LM E S
Sbjct: 197 LMWEAFS 203
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 36/67 (53%), Gaps = 8/67 (11%)
Query: 637 QHMNPKISDFGMARMFGGDE----LQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGV 692
QH KISDFG+++ DE Q + K V Y +PE FS KSDV+SFGV
Sbjct: 147 QHY-AKISDFGLSKALRADENXYKAQTHGKWPVKWY---APECINYYKFSSKSDVWSFGV 202
Query: 693 LMLEILS 699
LM E S
Sbjct: 203 LMWEAFS 209
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 134/324 (41%), Gaps = 72/324 (22%)
Query: 514 LFSFASVTAATENFSIQS-------KLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGL 565
L S A ++ +NF +++ +LG G +G V K R + +GQ +AVKR+
Sbjct: 33 LDSKACISIGNQNFEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNS-- 90
Query: 566 KEFKNEMMLIAKLQHRNL-----VRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKK-- 618
+ + +++ + R + V G +G+ + E M + SLD F K
Sbjct: 91 -QEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELM-DTSLDKFYKQVIDKGQ 148
Query: 619 ----HLLGWQLRVRIIDGIAQDQHMNPKIS--------------DFGMARM--FG--GDE 656
+LG ++ V I+ + +H++ K+S G +M FG G
Sbjct: 149 TIPEDILG-KIAVSIVKAL---EHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYL 204
Query: 657 LQGNTKRI-VGTYGYMSPEYALEGV----FSVKSDVFSFGVLMLEILSSKKNTGVYNTDS 711
+ K I G YM+PE + +SVKSD++S G+ M+E+ + + DS
Sbjct: 205 VDSVAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILR-----FPYDS 259
Query: 712 FNLLGHAWSLCKNDRAHELMDPVLQNEVSLP---MLVRYINVALLCVQENAEDRPTMSDV 768
W + +P Q LP +++ C+++N+++RPT +
Sbjct: 260 -------WGTPFQQLKQVVEEPSPQ----LPADKFSAEFVDFTSQCLKKNSKERPTYPE- 307
Query: 769 VSMINNELFNLPSPKEPPFTTFTK 792
++ + F L K +F K
Sbjct: 308 --LMQHPFFTLHESKGTDVASFVK 329
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
Query: 631 DGIAQDQHMNPKISDFGMA-RMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFS 689
+ I D H + +ISD G+A + G ++G VGT GYM+PE ++ D ++
Sbjct: 315 ENILLDDHGHIRISDLGLAVHVPEGQTIKGR----VGTVGYMAPEVVKNERYTFSPDWWA 370
Query: 690 FGVLMLEILSSK 701
G L+ E+++ +
Sbjct: 371 LGCLLYEMIAGQ 382
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 86/202 (42%), Gaps = 29/202 (14%)
Query: 521 TAATENFSIQSKLGEGGFGPVY--KGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKL 578
T + F LG G F V+ K RL G+ A+K + +NE+ ++ K+
Sbjct: 5 TNIRKTFIFMEVLGSGAFSEVFLVKQRL-TGKLFALKCIKKSPAFRDSSLENEIAVLKKI 63
Query: 579 QHRNLVRLLGCCIEQGEKILIYEY-----MVNKSLDVFLFDPTKKHLLGWQL--RVRII- 630
+H N+V L L+ + + ++ L+ ++ L+ Q+ V+ +
Sbjct: 64 KHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLH 123
Query: 631 -DGIAQDQ-------HMNPK------ISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYA 676
+GI ++ P+ I+DFG+++M E G GT GY++PE
Sbjct: 124 ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKM----EQNGIMSTACGTPGYVAPEVL 179
Query: 677 LEGVFSVKSDVFSFGVLMLEIL 698
+ +S D +S GV+ +L
Sbjct: 180 AQKPYSKAVDCWSIGVITYILL 201
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 36/67 (53%), Gaps = 8/67 (11%)
Query: 637 QHMNPKISDFGMARMFGGDE----LQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGV 692
QH KISDFG+++ DE Q + K V Y +PE FS KSDV+SFGV
Sbjct: 153 QHY-AKISDFGLSKALRADENYYKAQTHGKWPVKWY---APECINYYKFSSKSDVWSFGV 208
Query: 693 LMLEILS 699
LM E S
Sbjct: 209 LMWEAFS 215
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 116/273 (42%), Gaps = 52/273 (19%)
Query: 533 LGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMM-----LIAKLQHRNLVRLL 587
LG+GGF ++ + +EV ++ +S LK + E M + L H+++V
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLL-LKPHQREKMSMEISIHRSLAHQHVVGFH 105
Query: 588 GCCIEQGEKILIYEYMVNKSLDVF------LFDPTKKH-----LLGWQL--RVRIID--- 631
G + ++ E +SL L +P ++ +LG Q R R+I
Sbjct: 106 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 165
Query: 632 ---GIAQDQHMNPKISDFGMARMFGGDELQGNTKRIV-GTYGYMSPEYALEGVFSVKSDV 687
+ ++ + KI DFG+A E G K+++ GT Y++PE + S + DV
Sbjct: 166 KLGNLFLNEDLEVKIGDFGLATKV---EYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDV 222
Query: 688 FSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVRY 747
+S G +M +L K + T E + +NE S+P +
Sbjct: 223 WSIGCIMYTLLVGKPP---FETSCLK---------------ETYLRIKKNEYSIPKHINP 264
Query: 748 INVALL--CVQENAEDRPTMSDVVSMINNELFN 778
+ +L+ +Q + RPT+++ ++N+E F
Sbjct: 265 VAASLIQKMLQTDPTARPTINE---LLNDEFFT 294
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 116/273 (42%), Gaps = 52/273 (19%)
Query: 533 LGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMM-----LIAKLQHRNLVRLL 587
LG+GGF ++ + +EV ++ +S LK + E M + L H+++V
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLL-LKPHQREKMSMEISIHRSLAHQHVVGFH 81
Query: 588 GCCIEQGEKILIYEYMVNKSLDVF------LFDPTKKH-----LLGWQL--RVRIID--- 631
G + ++ E +SL L +P ++ +LG Q R R+I
Sbjct: 82 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 141
Query: 632 ---GIAQDQHMNPKISDFGMARMFGGDELQGNTKRIV-GTYGYMSPEYALEGVFSVKSDV 687
+ ++ + KI DFG+A E G K+++ GT Y++PE + S + DV
Sbjct: 142 KLGNLFLNEDLEVKIGDFGLATKV---EYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDV 198
Query: 688 FSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVRY 747
+S G +M +L K + T E + +NE S+P +
Sbjct: 199 WSIGCIMYTLLVGKPP---FETSCLK---------------ETYLRIKKNEYSIPKHINP 240
Query: 748 INVALL--CVQENAEDRPTMSDVVSMINNELFN 778
+ +L+ +Q + RPT+++ ++N+E F
Sbjct: 241 VAASLIQKMLQTDPTARPTINE---LLNDEFFT 270
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 34/62 (54%), Gaps = 7/62 (11%)
Query: 642 KISDFGMARMFGGDE----LQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEI 697
KISDFG+++ DE Q + K V Y +PE FS KSDV+SFGVLM E
Sbjct: 509 KISDFGLSKALRADENYYKAQTHGKWPVKWY---APECINYYKFSSKSDVWSFGVLMWEA 565
Query: 698 LS 699
S
Sbjct: 566 FS 567
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 87/209 (41%), Gaps = 44/209 (21%)
Query: 534 GEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCCIEQ 593
G FG V+K +L+N VAVK Q Q + + E+ ++H NL++ + ++
Sbjct: 24 ARGRFGCVWKAQLMN-DFVAVKIFPLQDKQSWQS-EREIFSTPGMKHENLLQFIAA-EKR 80
Query: 594 GEKILIYEYMVNKSLDV-FLFDPTKKHLLGWQLRVRIIDGIAQ----------------- 635
G + + +++ D L D K +++ W + + +++
Sbjct: 81 GSNLEVELWLITAFHDKGSLTDYLKGNIITWNELCHVAETMSRGLSYLHEDVPWCRGEGH 140
Query: 636 ----------------DQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEG 679
+ ++DFG+A F + G+T VGT YM+PE LEG
Sbjct: 141 KPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPE-VLEG 199
Query: 680 VFSVKSDVF------SFGVLMLEILSSKK 702
+ + D F + G+++ E++S K
Sbjct: 200 AINFQRDAFLRIDMYAMGLVLWELVSRCK 228
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 34/62 (54%), Gaps = 7/62 (11%)
Query: 642 KISDFGMARMFGGDE----LQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEI 697
KISDFG+++ DE Q + K V Y +PE FS KSDV+SFGVLM E
Sbjct: 510 KISDFGLSKALRADENYYKAQTHGKWPVKWY---APECINYYKFSSKSDVWSFGVLMWEA 566
Query: 698 LS 699
S
Sbjct: 567 FS 568
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 86/199 (43%), Gaps = 31/199 (15%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQ-EVAVKRL--SNQSGQGLK-EFKNEMMLIAKLQH 580
++F I LG+G FG VY R VA+K L S +G++ + + E+ + A L H
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 581 RNLVRLLGCCIEQGEKILIYEYMVNKSLDVFL-----FDPTKKHLLGWQLRVRII----- 630
N++RL ++ LI EY L L FD + + +L ++
Sbjct: 83 PNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCHGK 142
Query: 631 DGIAQDQHMNPK-----------ISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEG 679
I +D + P+ I+DFG + L+ T + GT Y+ PE
Sbjct: 143 KVIHRD--IKPENLLLGLKGELKIADFGWS--VHAPSLRRKT--MCGTLDYLPPEMIEGR 196
Query: 680 VFSVKSDVFSFGVLMLEIL 698
+ + K D++ GVL E+L
Sbjct: 197 MHNEKVDLWCIGVLCYELL 215
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 85/205 (41%), Gaps = 28/205 (13%)
Query: 518 ASVTAATENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFK---NEMM 573
A TA + F LG G FG V + + G A+K L Q LKE + NE
Sbjct: 34 AQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKR 93
Query: 574 LIAKLQHRNLVRLLGCCIEQGEKILIYEY-----MVNKSLDVFLF-DPTKK--------- 618
++ + LV+L + ++ EY M + + F +P +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT 153
Query: 619 ----HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPE 674
H L R + + DQ +++DFG+A+ ++G T + GT Y++PE
Sbjct: 154 FEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGLAK-----RVKGRTWXLCGTPEYLAPE 208
Query: 675 YALEGVFSVKSDVFSFGVLMLEILS 699
L ++ D ++ GVL+ E+ +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAA 233
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 81/189 (42%), Gaps = 21/189 (11%)
Query: 532 KLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCC 590
K+GEG G V + + G+ VAVK++ + Q + NE++++ QH N+V +
Sbjct: 81 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 140
Query: 591 IEQGEKILIYEYMVNKSL-DVFLFDPTKK-----------------HLLGWQLRVRIIDG 632
+ E ++ E++ +L D+ + H G R D
Sbjct: 141 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDS 200
Query: 633 IAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGV 692
I K+SDFG + K +VGT +M+PE + + D++S G+
Sbjct: 201 ILLTHDGRVKLSDFGFCAQVSKE--VPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGI 258
Query: 693 LMLEILSSK 701
+++E++ +
Sbjct: 259 MVIEMVDGE 267
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 84/204 (41%), Gaps = 44/204 (21%)
Query: 533 LGEGGFGPVYKGRLLN---GQEVAVK-----RLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
+G+G F V R +N GQ+ AVK + ++ G ++ K E + L+H ++V
Sbjct: 32 IGKGAFSVVR--RCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV 89
Query: 585 RLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGW--------QLRVRIIDG---- 632
LL G +++E+M L F+ K+ G+ +I++
Sbjct: 90 ELLETYSSDGMLYMVFEFMDGADL---CFEIVKRADAGFVYSEAVASHYMRQILEALRYC 146
Query: 633 ----------------IAQDQHMNP-KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEY 675
+A ++ P K+ DFG+A G L + VGT +M+PE
Sbjct: 147 HDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGR--VGTPHFMAPEV 204
Query: 676 ALEGVFSVKSDVFSFGVLMLEILS 699
+ DV+ GV++ +LS
Sbjct: 205 VKREPYGKPVDVWGCGVILFILLS 228
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 95/217 (43%), Gaps = 40/217 (18%)
Query: 516 SFASVTAATENFSIQSK------LGEGGFGPV---YKGRLLNGQEVAVKRLSN--QSGQG 564
+F SV F++ + +G G G V Y L + VA+K+LS Q+
Sbjct: 9 NFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTH 66
Query: 565 LKEFKNEMMLIAKLQHRNLVRLLGC-----CIEQGEKILIYEYMVNKSLDVFL---FDPT 616
K E++L+ + H+N++ LL +E+ + + I +++ +L + D
Sbjct: 67 AKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHE 126
Query: 617 KKHLLGWQLRVRIID----GIAQDQHMNP-----------KISDFGMARMFGGDELQGNT 661
+ L +Q+ V I GI + + P KI DFG+AR G + T
Sbjct: 127 RMSYLLYQMLVGIKHLHSAGIIH-RDLKPSNIVVKSDATLKILDFGLARTAGTSFMM--T 183
Query: 662 KRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEIL 698
+V Y Y +PE L + D++S GV+M E++
Sbjct: 184 PYVVTRY-YRAPEVILGMGYKENVDIWSVGVIMGEMI 219
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 94/215 (43%), Gaps = 36/215 (16%)
Query: 516 SFASVTAATENFSIQSK------LGEGGFGPVYKG-RLLNGQEVAVKRLSN--QSGQGLK 566
+F SV F++ + +G G G V + + VA+K+LS Q+ K
Sbjct: 9 NFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAK 68
Query: 567 EFKNEMMLIAKLQHRNLVRLLGC-----CIEQGEKILIYEYMVNKSLDVFL---FDPTKK 618
E++L+ + H+N++ LL +E+ + + I +++ +L + D +
Sbjct: 69 RAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERM 128
Query: 619 HLLGWQLRVRIID----GIAQDQHMNP-----------KISDFGMARMFGGDELQGNTKR 663
L +Q+ V I GI + + P KI DFG+AR G + T
Sbjct: 129 SYLLYQMLVGIKHLHSAGIIH-RDLKPSNIVVKSDATLKILDFGLARTAGTSFMM--TPY 185
Query: 664 IVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEIL 698
+V Y Y +PE L + D++S GV+M E++
Sbjct: 186 VVTRY-YRAPEVILGMGYKENVDIWSVGVIMGEMI 219
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 82/205 (40%), Gaps = 28/205 (13%)
Query: 518 ASVTAATENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFK---NEMM 573
A TA + F LG G FG V + + G A+K L Q LK+ + NE
Sbjct: 34 AQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 574 LIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFL------FDPTKK--------- 618
++ + LV+L + ++ EY + L +P +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLT 153
Query: 619 ----HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPE 674
H L R + + DQ K++DFG A+ ++G T + GT Y++PE
Sbjct: 154 FEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAPE 208
Query: 675 YALEGVFSVKSDVFSFGVLMLEILS 699
L ++ D ++ GVL+ E+ +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAA 233
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 91/196 (46%), Gaps = 28/196 (14%)
Query: 525 ENFSIQSKLGEGGFGPVYK-GRLLNGQEVAVKRLSNQSGQGLK-EFKNEMMLIAKLQHRN 582
++F S+LG G G V K +G +A K + + ++ + E+ ++ +
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 75
Query: 583 LVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTK--KHLLGWQLRVRIIDGIA--QDQH 638
+V G GE + E+M SLD L + + + +LG ++ + ++ G+A +++H
Sbjct: 76 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILG-KVSIAVLRGLAYLREKH 134
Query: 639 ------MNP-----------KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVF 681
+ P K+ DFG++ G + VGT YM+PE +
Sbjct: 135 QIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMAPERLQGTHY 190
Query: 682 SVKSDVFSFGVLMLEI 697
SV+SD++S G+ ++E+
Sbjct: 191 SVQSDIWSMGLSLVEL 206
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 75/159 (47%), Gaps = 37/159 (23%)
Query: 565 LKEFKNEMMLIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLD--VFLFDPTKKHLLG 622
+++ E+ ++ KL H N+V+L+ + E L YMV + ++ + PT K L
Sbjct: 80 IEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHL---YMVFELVNQGPVMEVPTLKPLSE 136
Query: 623 WQLRV---RIIDGI--------------------AQDQHMNPKISDFGMARMF-GGDELQ 658
Q R +I GI +D H+ KI+DFG++ F G D L
Sbjct: 137 DQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHI--KIADFGVSNEFKGSDALL 194
Query: 659 GNTKRIVGTYGYMSPEYALE--GVFSVKS-DVFSFGVLM 694
NT VGT +M+PE E +FS K+ DV++ GV +
Sbjct: 195 SNT---VGTPAFMAPESLSETRKIFSGKALDVWAMGVTL 230
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 84/205 (40%), Gaps = 28/205 (13%)
Query: 518 ASVTAATENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFK---NEMM 573
A TA + F LG G FG V + + G A+K L Q LK+ + NE
Sbjct: 34 AQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 574 LIAKLQHRNLVRLLGCCIEQGEKILIYEY-----MVNKSLDVFLF-DPTKK--------- 618
++ + LV+L + ++ EY M + + F +P +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT 153
Query: 619 ----HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPE 674
H L R + + DQ K++DFG A+ ++G T + GT Y++PE
Sbjct: 154 FEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAPE 208
Query: 675 YALEGVFSVKSDVFSFGVLMLEILS 699
L ++ D ++ GVL+ E+ +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAA 233
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 88/201 (43%), Gaps = 39/201 (19%)
Query: 532 KLGEGGFGPVYKGR-----LLNGQEVAVKRLSNQSGQGL--KEFKNEMMLIAKLQHRNLV 584
+LG G F V K R L + KR + S +G+ ++ + E+ ++ ++QH N++
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 585 RLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLL---GWQLRVRIIDGI-----AQD 636
L + + ILI E + L F F K+ L + +I++G+ Q
Sbjct: 78 TLHEVYENKTDVILILELVAGGEL--FDFLAEKESLTEEEATEFLKQILNGVYYLHSLQI 135
Query: 637 QH--MNP---------------KISDFGMARMFG-GDELQGNTKRIVGTYGYMSPEYALE 678
H + P KI DFG+A G+E K I GT +++PE
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF----KNIFGTPAFVAPEIVNY 191
Query: 679 GVFSVKSDVFSFGVLMLEILS 699
+++D++S GV+ +LS
Sbjct: 192 EPLGLEADMWSIGVITYILLS 212
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 630 IDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFS 689
+D + D + KI+DFGM + D + TK GT Y++PE + D ++
Sbjct: 470 LDNVMLDSEGHIKIADFGMCKENIWDGV--TTKXFCGTPDYIAPEIIAYQPYGKSVDWWA 527
Query: 690 FGVLMLEILSSK 701
FGVL+ E+L+ +
Sbjct: 528 FGVLLYEMLAGQ 539
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 115/273 (42%), Gaps = 52/273 (19%)
Query: 533 LGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMM-----LIAKLQHRNLVRLL 587
LG+GGF ++ + +EV ++ +S LK + E M + L H+++V
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLL-LKPHQREKMSMEISIHRSLAHQHVVGFH 87
Query: 588 GCCIEQGEKILIYEYMVNKSLDVF------LFDPTKKH-----LLGWQL--RVRIID--- 631
G + ++ E +SL L +P ++ +LG Q R R+I
Sbjct: 88 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 147
Query: 632 ---GIAQDQHMNPKISDFGMARMFGGDELQGNTKR-IVGTYGYMSPEYALEGVFSVKSDV 687
+ ++ + KI DFG+A E G K+ + GT Y++PE + S + DV
Sbjct: 148 KLGNLFLNEDLEVKIGDFGLATKV---EYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDV 204
Query: 688 FSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVRY 747
+S G +M +L K + T E + +NE S+P +
Sbjct: 205 WSIGCIMYTLLVGKPP---FETSCLK---------------ETYLRIKKNEYSIPKHINP 246
Query: 748 INVALL--CVQENAEDRPTMSDVVSMINNELFN 778
+ +L+ +Q + RPT+++ ++N+E F
Sbjct: 247 VAASLIQKMLQTDPTARPTINE---LLNDEFFT 276
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 83/205 (40%), Gaps = 31/205 (15%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEV----AVKRLSN----QSGQGLKEFKNEMMLIA 576
ENF + LG G +G V+ R ++G + A+K L Q + + + E ++
Sbjct: 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 113
Query: 577 KLQHRNLVRLLGCCIEQGEKI-LIYEYMVNKSLDVFLFDPTK------------------ 617
++ + L + K+ LI +Y+ L L +
Sbjct: 114 HIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALE 173
Query: 618 -KHLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYA 676
H LG R ++ I D + + ++DFG+++ F DE + GT YM+P+
Sbjct: 174 HLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETE-RAYDFCGTIEYMAPDIV 232
Query: 677 LEG--VFSVKSDVFSFGVLMLEILS 699
G D +S GVLM E+L+
Sbjct: 233 RGGDSGHDKAVDWWSLGVLMYELLT 257
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 96/207 (46%), Gaps = 47/207 (22%)
Query: 531 SKLGEGGFGPVYKGR-LLNGQEVAVKRL---SNQSGQGLKEFKNEMMLIAKLQHRNLVRL 586
+K+G+G FG V+K R GQ+VA+K++ + + G + + E+ ++ L+H N+V L
Sbjct: 24 AKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR-EIKILQLLKHENVVNL 82
Query: 587 LGCCIE--------QGEKILIYEY-------MVNKSLDVFLFDPTKKHL------LGWQL 625
+ C +G L++++ +++ L F K+ + L +
Sbjct: 83 IEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH 142
Query: 626 RVRIIDG--------IAQDQHMNPKISDFGMARMFGGDELQGNTK------RIVGTYGYM 671
R +I+ I +D + K++DFG+AR F L N++ R+V T Y
Sbjct: 143 RNKILHRDMKAANVLITRDGVL--KLADFGLARAFS---LAKNSQPNRYXNRVV-TLWYR 196
Query: 672 SPEYAL-EGVFSVKSDVFSFGVLMLEI 697
PE L E + D++ G +M E+
Sbjct: 197 PPELLLGERDYGPPIDLWGAGCIMAEM 223
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 115/273 (42%), Gaps = 52/273 (19%)
Query: 533 LGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMM-----LIAKLQHRNLVRLL 587
LG+GGF ++ + +EV ++ +S LK + E M + L H+++V
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLL-LKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 588 GCCIEQGEKILIYEYMVNKSLDVF------LFDPTKKH-----LLGWQL--RVRIID--- 631
G + ++ E +SL L +P ++ +LG Q R R+I
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 143
Query: 632 ---GIAQDQHMNPKISDFGMARMFGGDELQGNTKR-IVGTYGYMSPEYALEGVFSVKSDV 687
+ ++ + KI DFG+A E G K+ + GT Y++PE + S + DV
Sbjct: 144 KLGNLFLNEDLEVKIGDFGLATKV---EYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDV 200
Query: 688 FSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVRY 747
+S G +M +L K + T E + +NE S+P +
Sbjct: 201 WSIGCIMYTLLVGKPP---FETSCLK---------------ETYLRIKKNEYSIPKHINP 242
Query: 748 INVALL--CVQENAEDRPTMSDVVSMINNELFN 778
+ +L+ +Q + RPT+++ ++N+E F
Sbjct: 243 VAASLIQKMLQTDPTARPTINE---LLNDEFFT 272
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 38.1 bits (87), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 115/273 (42%), Gaps = 52/273 (19%)
Query: 533 LGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMM-----LIAKLQHRNLVRLL 587
LG+GGF ++ + +EV ++ +S LK + E M + L H+++V
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLL-LKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 588 GCCIEQGEKILIYEYMVNKSLDVF------LFDPTKKH-----LLGWQL--RVRIID--- 631
G + ++ E +SL L +P ++ +LG Q R R+I
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 143
Query: 632 ---GIAQDQHMNPKISDFGMARMFGGDELQGNTKR-IVGTYGYMSPEYALEGVFSVKSDV 687
+ ++ + KI DFG+A E G K+ + GT Y++PE + S + DV
Sbjct: 144 KLGNLFLNEDLEVKIGDFGLATKV---EYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDV 200
Query: 688 FSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVRY 747
+S G +M +L K + T E + +NE S+P +
Sbjct: 201 WSIGCIMYTLLVGKPP---FETSCLK---------------ETYLRIKKNEYSIPKHINP 242
Query: 748 INVALL--CVQENAEDRPTMSDVVSMINNELFN 778
+ +L+ +Q + RPT+++ ++N+E F
Sbjct: 243 VAASLIQKMLQTDPTARPTINE---LLNDEFFT 272
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 38.1 bits (87), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 83/205 (40%), Gaps = 28/205 (13%)
Query: 518 ASVTAATENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFK---NEMM 573
A TA + F LG G FG V + + G A+K L Q LK+ + NE
Sbjct: 34 AQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 574 LIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLF------DPTKK--------- 618
++ + LV+L + ++ EY+ + L +P +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT 153
Query: 619 ----HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPE 674
H L R + + DQ +++DFG A+ ++G T + GT Y++PE
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPE 208
Query: 675 YALEGVFSVKSDVFSFGVLMLEILS 699
L ++ D ++ GVL+ E+ +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAA 233
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 97/235 (41%), Gaps = 50/235 (21%)
Query: 532 KLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFK-NEMMLIAKLQHRNLVRLLGCC 590
K+G G +G VYK + +G++ L G G+ E+ L+ +L+H N++ L
Sbjct: 28 KVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVF 87
Query: 591 IEQGEKI--LIYEYMVNKSLDVFLFDPTKK---------HLLGWQLRVRIIDGI------ 633
+ ++ L+++Y + + F K + L +I+DGI
Sbjct: 88 LSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN 147
Query: 634 -AQDQHMNP---------------KISDFGMARMFGGD-ELQGNTKRIVGTYGYMSPEYA 676
+ + P KI+D G AR+F + + +V T+ Y +PE
Sbjct: 148 WVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELL 207
Query: 677 LEGVFSVKS-DVFSFGVLMLEILSSK----------KNTGVYNTDS----FNLLG 716
L K+ D+++ G + E+L+S+ K + Y+ D FN++G
Sbjct: 208 LGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMG 262
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 85/206 (41%), Gaps = 36/206 (17%)
Query: 527 FSIQSKLGEGGFGPVYKG-RLLNGQEVAVKRLSNQ-SGQGLKEFKNEMMLIAKLQHRNLV 584
+ ++ +LG GGFG V + G++VA+K+ + S + + + E+ ++ KL H N+V
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 75
Query: 585 RL------LGCCIEQGEKILIYEYMVNKSLDVFL--FD--------PTKKHLLGWQLRVR 628
L +L EY L +L F+ P + L +R
Sbjct: 76 SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALR 135
Query: 629 IIDG---IAQD------------QHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSP 673
+ I +D Q + KI D G A+ EL VGT Y++P
Sbjct: 136 YLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL---CTEFVGTLQYLAP 192
Query: 674 EYALEGVFSVKSDVFSFGVLMLEILS 699
E + ++V D +SFG L E ++
Sbjct: 193 ELLEQKKYTVTVDYWSFGTLAFECIT 218
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 85/206 (41%), Gaps = 36/206 (17%)
Query: 527 FSIQSKLGEGGFGPVYKG-RLLNGQEVAVKRLSNQ-SGQGLKEFKNEMMLIAKLQHRNLV 584
+ ++ +LG GGFG V + G++VA+K+ + S + + + E+ ++ KL H N+V
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 76
Query: 585 RL------LGCCIEQGEKILIYEYMVNKSLDVFL--FD--------PTKKHLLGWQLRVR 628
L +L EY L +L F+ P + L +R
Sbjct: 77 SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALR 136
Query: 629 IIDG---IAQD------------QHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSP 673
+ I +D Q + KI D G A+ EL VGT Y++P
Sbjct: 137 YLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL---CTEFVGTLQYLAP 193
Query: 674 EYALEGVFSVKSDVFSFGVLMLEILS 699
E + ++V D +SFG L E ++
Sbjct: 194 ELLEQKKYTVTVDYWSFGTLAFECIT 219
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Query: 619 HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALE 678
H G R +D + D + KI+DFGM + D + T+ GT Y++PE
Sbjct: 137 HKRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGV--TTREFCGTPDYIAPEIIAY 194
Query: 679 GVFSVKSDVFSFGVLMLEILSSK 701
+ D +++GVL+ E+L+ +
Sbjct: 195 QPYGKSVDWWAYGVLLYEMLAGQ 217
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 37.7 bits (86), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 83/205 (40%), Gaps = 28/205 (13%)
Query: 518 ASVTAATENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFK---NEMM 573
A TA + F LG G FG V + + G A+K L Q LK+ + NE
Sbjct: 34 AQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 574 LIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFL------FDPTKK--------- 618
++ + LV+L + ++ EY+ + L +P +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLT 153
Query: 619 ----HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPE 674
H L R + + DQ +++DFG A+ ++G T + GT Y++PE
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPE 208
Query: 675 YALEGVFSVKSDVFSFGVLMLEILS 699
L ++ D ++ GVL+ E+ +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAA 233
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 37.7 bits (86), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 83/205 (40%), Gaps = 28/205 (13%)
Query: 518 ASVTAATENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFK---NEMM 573
A TA + F LG G FG V + + G A+K L Q LK+ + NE
Sbjct: 34 AQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 574 LIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFL------FDPTKK--------- 618
++ + LV+L + ++ EY+ + L +P +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLT 153
Query: 619 ----HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPE 674
H L R + + DQ +++DFG A+ ++G T + GT Y++PE
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPE 208
Query: 675 YALEGVFSVKSDVFSFGVLMLEILS 699
L ++ D ++ GVL+ E+ +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAA 233
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 37.7 bits (86), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 96/207 (46%), Gaps = 47/207 (22%)
Query: 531 SKLGEGGFGPVYKGRLLN-GQEVAVKRL---SNQSGQGLKEFKNEMMLIAKLQHRNLVRL 586
+K+G+G FG V+K R GQ+VA+K++ + + G + + E+ ++ L+H N+V L
Sbjct: 23 AKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR-EIKILQLLKHENVVNL 81
Query: 587 LGCCIE--------QGEKILIYEY-------MVNKSLDVFLFDPTKKHL------LGWQL 625
+ C +G L++++ +++ L F K+ + L +
Sbjct: 82 IEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH 141
Query: 626 RVRIIDG--------IAQDQHMNPKISDFGMARMFGGDELQGNTK------RIVGTYGYM 671
R +I+ I +D + K++DFG+AR F L N++ R+V T Y
Sbjct: 142 RNKILHRDMKAANVLITRDGVL--KLADFGLARAFS---LAKNSQPNRYXNRVV-TLWYR 195
Query: 672 SPEYAL-EGVFSVKSDVFSFGVLMLEI 697
PE L E + D++ G +M E+
Sbjct: 196 PPELLLGERDYGPPIDLWGAGCIMAEM 222
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 37.7 bits (86), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 83/205 (40%), Gaps = 28/205 (13%)
Query: 518 ASVTAATENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFK---NEMM 573
A TA + F LG G FG V + + G A+K L Q LK+ + NE
Sbjct: 35 AQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 94
Query: 574 LIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFL------FDPTKK--------- 618
++ + LV+L + ++ EY+ + L +P +
Sbjct: 95 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLT 154
Query: 619 ----HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPE 674
H L R + + DQ +++DFG A+ ++G T + GT Y++PE
Sbjct: 155 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPE 209
Query: 675 YALEGVFSVKSDVFSFGVLMLEILS 699
L ++ D ++ GVL+ E+ +
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAA 234
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 10/69 (14%)
Query: 642 KISDFGMARMFGGDELQ----------GNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFG 691
K+ DFG+ DE + VGT YMSPE +S K D+FS G
Sbjct: 204 KVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLG 263
Query: 692 VLMLEILSS 700
+++ E+L S
Sbjct: 264 LILFELLYS 272
Score = 31.2 bits (69), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 533 LGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKE-FKNEMMLIAKLQHRNLVRLLGCC 590
+G GGFG V++ + ++ A+KR+ + + +E E+ +AKL+H +VR
Sbjct: 14 MGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAW 73
Query: 591 IE 592
+E
Sbjct: 74 LE 75
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 37.4 bits (85), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 83/205 (40%), Gaps = 28/205 (13%)
Query: 518 ASVTAATENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFK---NEMM 573
A TA + F +G G FG V + + G A+K L Q LK+ + NE
Sbjct: 34 AQNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 574 LIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLF------DPTKK--------- 618
++ + LV+L + ++ EY+ + L +P +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT 153
Query: 619 ----HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPE 674
H L R + + DQ K++DFG A+ ++G T + GT Y++PE
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGTPEYLAPE 208
Query: 675 YALEGVFSVKSDVFSFGVLMLEILS 699
L ++ D ++ GVL+ E+ +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAA 233
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 37.4 bits (85), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 96/207 (46%), Gaps = 47/207 (22%)
Query: 531 SKLGEGGFGPVYKGRLLN-GQEVAVKRL---SNQSGQGLKEFKNEMMLIAKLQHRNLVRL 586
+K+G+G FG V+K R GQ+VA+K++ + + G + + E+ ++ L+H N+V L
Sbjct: 24 AKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR-EIKILQLLKHENVVNL 82
Query: 587 LGCCIE--------QGEKILIYEY-------MVNKSLDVFLFDPTKKHL------LGWQL 625
+ C +G L++++ +++ L F K+ + L +
Sbjct: 83 IEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH 142
Query: 626 RVRIIDG--------IAQDQHMNPKISDFGMARMFGGDELQGNTK------RIVGTYGYM 671
R +I+ I +D + K++DFG+AR F L N++ R+V T Y
Sbjct: 143 RNKILHRDMKAANVLITRDGVL--KLADFGLARAFS---LAKNSQPNRYXNRVV-TLWYR 196
Query: 672 SPEYAL-EGVFSVKSDVFSFGVLMLEI 697
PE L E + D++ G +M E+
Sbjct: 197 PPELLLGERDYGPPIDLWGAGCIMAEM 223
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 37.4 bits (85), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 80/189 (42%), Gaps = 21/189 (11%)
Query: 532 KLGEGGFGPV-YKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGCC 590
K+GEG G V G++VAVK++ + Q + NE++++ H N+V +
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSY 111
Query: 591 IEQGEKILIYEYMVNKSL-DVF-----------------LFDPTKKHLLGWQLRVRIIDG 632
+ E ++ E++ +L D+ L + H G R D
Sbjct: 112 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDS 171
Query: 633 IAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGV 692
I K+SDFG + K +VGT +M+PE + + D++S G+
Sbjct: 172 ILLTSDGRIKLSDFGFCAQVSKE--VPKRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGI 229
Query: 693 LMLEILSSK 701
+++E++ +
Sbjct: 230 MVIEMIDGE 238
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 37.4 bits (85), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 630 IDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFS 689
+D + D + KI+DFGM + D + TK GT Y++PE + D ++
Sbjct: 149 LDNVMLDSEGHIKIADFGMCKENIWDGV--TTKXFCGTPDYIAPEIIAYQPYGKSVDWWA 206
Query: 690 FGVLMLEILSSK 701
FGVL+ E+L+ +
Sbjct: 207 FGVLLYEMLAGQ 218
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 37.4 bits (85), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 83/205 (40%), Gaps = 28/205 (13%)
Query: 518 ASVTAATENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFK---NEMM 573
A TA + F LG G FG V + + G A+K L Q LK+ + NE
Sbjct: 20 AQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 79
Query: 574 LIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLF------DPTKK--------- 618
++ + LV+L + ++ EY+ + L +P +
Sbjct: 80 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT 139
Query: 619 ----HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPE 674
H L R + + DQ +++DFG A+ ++G T + GT Y++PE
Sbjct: 140 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWTLCGTPEYLAPE 194
Query: 675 YALEGVFSVKSDVFSFGVLMLEILS 699
L ++ D ++ GVL+ E+ +
Sbjct: 195 IILSKGYNKAVDWWALGVLIYEMAA 219
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 37.4 bits (85), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 88/201 (43%), Gaps = 39/201 (19%)
Query: 532 KLGEGGFGPVYKGR-----LLNGQEVAVKRLSNQSGQGL--KEFKNEMMLIAKLQHRNLV 584
+LG G F V K R L + KR + S +G+ ++ + E+ ++ ++QH N++
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 585 RLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLL---GWQLRVRIIDGI-----AQD 636
L + + ILI E + L F F K+ L + +I++G+ Q
Sbjct: 78 TLHEVYENKTDVILILELVAGGEL--FDFLAEKESLTEEEATEFLKQILNGVYYLHSLQI 135
Query: 637 QH--MNP---------------KISDFGMARMFG-GDELQGNTKRIVGTYGYMSPEYALE 678
H + P KI DFG+A G+E K I GT +++PE
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF----KNIFGTPEFVAPEIVNY 191
Query: 679 GVFSVKSDVFSFGVLMLEILS 699
+++D++S GV+ +LS
Sbjct: 192 EPLGLEADMWSIGVITYILLS 212
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 20/103 (19%)
Query: 597 ILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDE 656
+L +EY+ SLD+ D ++LL DQ K++DFG A+
Sbjct: 152 VLTFEYL--HSLDLIYRDLKPENLL-------------IDQQGYIKVADFGFAK-----R 191
Query: 657 LQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS 699
++G T + GT Y++PE L ++ D ++ GVL+ E+ +
Sbjct: 192 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 234
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 83/205 (40%), Gaps = 28/205 (13%)
Query: 518 ASVTAATENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFK---NEMM 573
A TA + F LG G FG V + + G A+K L Q LK+ + NE
Sbjct: 34 AQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 574 LIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLF------DPTKK--------- 618
++ + LV+L + ++ EY+ + L +P +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT 153
Query: 619 ----HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPE 674
H L R + + DQ +++DFG A+ ++G T + GT Y++PE
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPE 208
Query: 675 YALEGVFSVKSDVFSFGVLMLEILS 699
L ++ D ++ GVL+ E+ +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAA 233
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 88/202 (43%), Gaps = 39/202 (19%)
Query: 531 SKLGEGGFGPVYKGR-----LLNGQEVAVKRLSNQSGQGL--KEFKNEMMLIAKLQHRNL 583
+LG G F V K R L + KR + S +G+ ++ + E+ ++ ++QH N+
Sbjct: 17 EELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 584 VRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLL---GWQLRVRIIDGI-----AQ 635
+ L + + ILI E + L F F K+ L + +I++G+ Q
Sbjct: 77 ITLHEVYENKTDVILILELVAGGEL--FDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ 134
Query: 636 DQH--MNP---------------KISDFGMARMFG-GDELQGNTKRIVGTYGYMSPEYAL 677
H + P KI DFG+A G+E K I GT +++PE
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF----KNIFGTPEFVAPEIVN 190
Query: 678 EGVFSVKSDVFSFGVLMLEILS 699
+++D++S GV+ +LS
Sbjct: 191 YEPLGLEADMWSIGVITYILLS 212
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 37.0 bits (84), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 88/202 (43%), Gaps = 39/202 (19%)
Query: 531 SKLGEGGFGPVYKGR-----LLNGQEVAVKRLSNQSGQGL--KEFKNEMMLIAKLQHRNL 583
+LG G F V K R L + KR + S +G+ ++ + E+ ++ ++QH N+
Sbjct: 16 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 75
Query: 584 VRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLL---GWQLRVRIIDGI-----AQ 635
+ L + + ILI E + L F F K+ L + +I++G+ Q
Sbjct: 76 ITLHEVYENKTDVILILELVAGGEL--FDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ 133
Query: 636 DQH--MNP---------------KISDFGMARMFG-GDELQGNTKRIVGTYGYMSPEYAL 677
H + P KI DFG+A G+E K I GT +++PE
Sbjct: 134 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF----KNIFGTPEFVAPEIVN 189
Query: 678 EGVFSVKSDVFSFGVLMLEILS 699
+++D++S GV+ +LS
Sbjct: 190 YEPLGLEADMWSIGVITYILLS 211
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 37.0 bits (84), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 85/206 (41%), Gaps = 40/206 (19%)
Query: 522 AATENFSIQSKLGEGGFGPVYKGRLLNGQE-VAVKRLSNQSGQGLKEFKNEMMLIAKLQH 580
A ++ F ++S+LG G VY+ + Q+ A+K L + K + E+ ++ +L H
Sbjct: 50 ALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDK--KIVRTEIGVLLRLSH 107
Query: 581 RNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQ----- 635
N+++L E L+ E + L FD + G+ D + Q
Sbjct: 108 PNIIKLKEIFETPTEISLVLELVTGGEL----FDRIVEK--GYYSERDAADAVKQILEAV 161
Query: 636 ---------DQHMNP--------------KISDFGMARMFGGDELQGNTKRIVGTYGYMS 672
+ + P KI+DFG++++ E Q K + GT GY +
Sbjct: 162 AYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIV---EHQVLMKTVCGTPGYCA 218
Query: 673 PEYALEGVFSVKSDVFSFGVLMLEIL 698
PE + + D++S G++ +L
Sbjct: 219 PEILRGCAYGPEVDMWSVGIITYILL 244
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 37.0 bits (84), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 83/205 (40%), Gaps = 28/205 (13%)
Query: 518 ASVTAATENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFK---NEMM 573
A TA + F LG G FG V + + G A+K L Q LK+ + NE
Sbjct: 35 AQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 94
Query: 574 LIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLF------DPTKK--------- 618
++ + LV+L + ++ EY+ + L +P +
Sbjct: 95 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT 154
Query: 619 ----HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPE 674
H L R + + DQ +++DFG A+ ++G T + GT Y++PE
Sbjct: 155 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPE 209
Query: 675 YALEGVFSVKSDVFSFGVLMLEILS 699
L ++ D ++ GVL+ E+ +
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAA 234
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 37.0 bits (84), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 88/202 (43%), Gaps = 39/202 (19%)
Query: 531 SKLGEGGFGPVYKGR-----LLNGQEVAVKRLSNQSGQGL--KEFKNEMMLIAKLQHRNL 583
+LG G F V K R L + KR + S +G+ ++ + E+ ++ ++QH N+
Sbjct: 16 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 75
Query: 584 VRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLL---GWQLRVRIIDGI-----AQ 635
+ L + + ILI E + L F F K+ L + +I++G+ Q
Sbjct: 76 ITLHEVYENKTDVILILELVAGGEL--FDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ 133
Query: 636 DQH--MNP---------------KISDFGMARMFG-GDELQGNTKRIVGTYGYMSPEYAL 677
H + P KI DFG+A G+E K I GT +++PE
Sbjct: 134 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF----KNIFGTPEFVAPEIVN 189
Query: 678 EGVFSVKSDVFSFGVLMLEILS 699
+++D++S GV+ +LS
Sbjct: 190 YEPLGLEADMWSIGVITYILLS 211
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 37.0 bits (84), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 83/205 (40%), Gaps = 28/205 (13%)
Query: 518 ASVTAATENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFK---NEMM 573
A TA + F LG G FG V + + G A+K L Q LK+ + NE
Sbjct: 34 AQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 574 LIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLF------DPTKK--------- 618
++ + LV+L + ++ EY+ + L +P +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT 153
Query: 619 ----HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPE 674
H L R + + DQ +++DFG A+ ++G T + GT Y++PE
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPE 208
Query: 675 YALEGVFSVKSDVFSFGVLMLEILS 699
L ++ D ++ GVL+ E+ +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAA 233
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 37.0 bits (84), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 83/205 (40%), Gaps = 28/205 (13%)
Query: 518 ASVTAATENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFK---NEMM 573
A TA + F LG G FG V + + G A+K L Q LK+ + NE
Sbjct: 34 AQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 574 LIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLF------DPTKK--------- 618
++ + LV+L + ++ EY+ + L +P +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT 153
Query: 619 ----HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPE 674
H L R + + DQ +++DFG A+ ++G T + GT Y++PE
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPE 208
Query: 675 YALEGVFSVKSDVFSFGVLMLEILS 699
L ++ D ++ GVL+ E+ +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAA 233
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 37.0 bits (84), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 84/206 (40%), Gaps = 43/206 (20%)
Query: 524 TENFSIQSKLGEGGFGPVYKGRLLNGQE----VAVKRLSNQSGQGLKE-FKNEMMLIAKL 578
++ + + +G G FG RL+ ++ VAVK + + G+ + E K E++ L
Sbjct: 18 SDRYELVKDIGAGNFG---VARLMRDKQANELVAVKYI--ERGEKIDENVKREIINHRSL 72
Query: 579 QHRNLVRLLGCCIEQGEKILIYEY-----MVNKSLDVFLFDPTKKHLLGWQLRVRIIDGI 633
+H N+VR + ++ EY + + + F + QL I G+
Sbjct: 73 RHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL----ISGV 128
Query: 634 AQDQHMNP--------------------KISDFGMARMFGGDELQGNTKRIVGTYGYMSP 673
+ M KI+DFG ++ L K VGT Y++P
Sbjct: 129 SYAHAMQVAHRDLKLENTLLDGSPAPRLKIADFGYSK---ASVLHSQPKSAVGTPAYIAP 185
Query: 674 EYALEGVFSVK-SDVFSFGVLMLEIL 698
E L+ + K +DV+S GV + +L
Sbjct: 186 EVLLKKEYDGKVADVWSCGVTLYVML 211
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 37.0 bits (84), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 5/58 (8%)
Query: 533 LGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLGC 589
+G GGFG V+K + ++G+ ++R+ + + +E K +AKL H N+V GC
Sbjct: 20 IGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAEREVK----ALAKLDHVNIVHYNGC 73
Score = 36.6 bits (83), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 642 KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEIL 698
KI DFG+ D G R GT YMSPE + + D+++ G+++ E+L
Sbjct: 176 KIGDFGLVTSLKND---GKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 37.0 bits (84), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 88/202 (43%), Gaps = 39/202 (19%)
Query: 531 SKLGEGGFGPVYKGR-----LLNGQEVAVKRLSNQSGQGL--KEFKNEMMLIAKLQHRNL 583
+LG G F V K R L + KR + S +G+ ++ + E+ ++ ++QH N+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 584 VRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLL---GWQLRVRIIDGI-----AQ 635
+ L + + ILI E + L F F K+ L + +I++G+ Q
Sbjct: 77 ITLHEVYENKTDVILILELVAGGEL--FDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ 134
Query: 636 DQH--MNP---------------KISDFGMARMFG-GDELQGNTKRIVGTYGYMSPEYAL 677
H + P KI DFG+A G+E K I GT +++PE
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF----KNIFGTPEFVAPEIVN 190
Query: 678 EGVFSVKSDVFSFGVLMLEILS 699
+++D++S GV+ +LS
Sbjct: 191 YEPLGLEADMWSIGVITYILLS 212
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 37.0 bits (84), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 83/205 (40%), Gaps = 28/205 (13%)
Query: 518 ASVTAATENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFK---NEMM 573
A TA + F LG G FG V + + G A+K L Q LK+ + NE
Sbjct: 35 AQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 94
Query: 574 LIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLF------DPTKK--------- 618
++ + LV+L + ++ EY+ + L +P +
Sbjct: 95 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT 154
Query: 619 ----HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPE 674
H L R + + DQ +++DFG A+ ++G T + GT Y++PE
Sbjct: 155 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWTLCGTPEYLAPE 209
Query: 675 YALEGVFSVKSDVFSFGVLMLEILS 699
L ++ D ++ GVL+ E+ +
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAA 234
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 37.0 bits (84), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 84/205 (40%), Gaps = 28/205 (13%)
Query: 518 ASVTAATENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFK---NEMM 573
A TA + F LG G FG V + + G A+K L Q LK+ + NE
Sbjct: 34 AQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 574 LIAKLQHRNLVRLLGCCIEQGEKILIYEY-----MVNKSLDVFLF-DPTKK--------- 618
++ + LV+L + ++ EY M + + F +P +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT 153
Query: 619 ----HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPE 674
H L R + + DQ +++DFG A+ ++G T + GT Y++PE
Sbjct: 154 FEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPE 208
Query: 675 YALEGVFSVKSDVFSFGVLMLEILS 699
L ++ D ++ GVL+ E+ +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAA 233
>pdb|2D04|B Chain B, Crystal Structure Of Neoculin, A Sweet Protein With
Taste-Modifying Activity.
pdb|2D04|D Chain D, Crystal Structure Of Neoculin, A Sweet Protein With
Taste-Modifying Activity.
pdb|2D04|F Chain F, Crystal Structure Of Neoculin, A Sweet Protein With
Taste-Modifying Activity.
pdb|2D04|H Chain H, Crystal Structure Of Neoculin, A Sweet Protein With
Taste-Modifying Activity
Length = 114
Score = 37.0 bits (84), Expect = 0.047, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 106 LTVSNRGNLVLLNQSNGTIWSSNVSREVKNPVAQLLDNGNLVIRDNSGSNSTESYLW 162
LT+ N+ NLV Q+ IW+SN R LL +GNLVI D++ ++ S W
Sbjct: 23 LTIQNKCNLVKY-QNGRQIWASNTDRRGSGCRLTLLSDGNLVIYDHNNNDVWGSACW 78
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 37.0 bits (84), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 81/205 (39%), Gaps = 28/205 (13%)
Query: 518 ASVTAATENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFK---NEMM 573
A TA + F LG G FG V + + G A+K L Q LK+ + NE
Sbjct: 35 AQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 94
Query: 574 LIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFL------FDPTKK--------- 618
++ + L +L + ++ EY + L +P +
Sbjct: 95 ILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLT 154
Query: 619 ----HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPE 674
H L R + + DQ K++DFG A+ ++G T + GT Y++PE
Sbjct: 155 FEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAPE 209
Query: 675 YALEGVFSVKSDVFSFGVLMLEILS 699
L ++ D ++ GVL+ E+ +
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAA 234
>pdb|2DPF|A Chain A, Crystal Structure Of Curculin1 Homodimer
pdb|2DPF|B Chain B, Crystal Structure Of Curculin1 Homodimer
pdb|2DPF|C Chain C, Crystal Structure Of Curculin1 Homodimer
pdb|2DPF|D Chain D, Crystal Structure Of Curculin1 Homodimer
Length = 115
Score = 37.0 bits (84), Expect = 0.048, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 106 LTVSNRGNLVLLNQSNGTIWSSNVSREVKNPVAQLLDNGNLVIRDNSGSNSTESYLW 162
LT+ N+ NLV Q+ IW+SN R LL +GNLVI D++ ++ S W
Sbjct: 24 LTIQNKCNLVKY-QNGRQIWASNTDRRGSGCRLTLLSDGNLVIYDHNNNDVWGSACW 79
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 37.0 bits (84), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 82/202 (40%), Gaps = 28/202 (13%)
Query: 521 TAATENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFK---NEMMLIA 576
TA + F LG G FG V + +G A+K L Q LK+ + NE ++
Sbjct: 37 TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 577 KLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFL------FDPTKK------------ 618
+ LV+L + ++ EY+ + L +P +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEY 156
Query: 619 -HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYAL 677
H L R + + DQ +++DFG A+ ++G T + GT Y++PE L
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIIL 211
Query: 678 EGVFSVKSDVFSFGVLMLEILS 699
++ D ++ GVL+ E+ +
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAA 233
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 36.6 bits (83), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 87/208 (41%), Gaps = 30/208 (14%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQSG--QGLKEFKNEMMLIAKLQHR 581
+ + I +G G +G V R L GQ+VA+K++ N K E+ ++ +H
Sbjct: 55 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHD 114
Query: 582 NLVR---LLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLR---VRIIDGI-- 633
N++ +L + GE +Y + D+ + + L +R +++ G+
Sbjct: 115 NIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKY 174
Query: 634 ---AQDQH--MNP-----------KISDFGMARMF--GGDELQGNTKRIVGTYGYMSPEY 675
AQ H + P KI DFGMAR E Q V T Y +PE
Sbjct: 175 MHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPEL 234
Query: 676 ALE-GVFSVKSDVFSFGVLMLEILSSKK 702
L ++ D++S G + E+L+ ++
Sbjct: 235 MLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 36.6 bits (83), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 83/205 (40%), Gaps = 28/205 (13%)
Query: 518 ASVTAATENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFK---NEMM 573
A TA + F LG G FG V + + G A+K L Q LK+ + NE
Sbjct: 35 AQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 94
Query: 574 LIAKLQHRNLVRLLGCCIEQGEKILIYEY-----MVNKSLDVFLF-DPTKK--------- 618
++ + L +L + ++ EY M + + F +P +
Sbjct: 95 ILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT 154
Query: 619 ----HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPE 674
H L R + + DQ K++DFG A+ ++G T + GT Y++PE
Sbjct: 155 FEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAPE 209
Query: 675 YALEGVFSVKSDVFSFGVLMLEILS 699
L ++ D ++ GVL+ E+ +
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAA 234
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 36.6 bits (83), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 88/202 (43%), Gaps = 39/202 (19%)
Query: 531 SKLGEGGFGPVYKGR-----LLNGQEVAVKRLSNQSGQGL--KEFKNEMMLIAKLQHRNL 583
+LG G F V K R L + KR + S +G+ ++ + E+ ++ ++QH N+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 584 VRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLL---GWQLRVRIIDGI-----AQ 635
+ L + + ILI E + L F F K+ L + +I++G+ Q
Sbjct: 77 ITLHEVYENKTDVILILELVAGGEL--FDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ 134
Query: 636 DQH--MNP---------------KISDFGMARMFG-GDELQGNTKRIVGTYGYMSPEYAL 677
H + P KI DFG+A G+E K I GT +++PE
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF----KNIFGTPEFVAPEIVN 190
Query: 678 EGVFSVKSDVFSFGVLMLEILS 699
+++D++S GV+ +LS
Sbjct: 191 YEPLGLEADMWSIGVITYILLS 212
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 36.6 bits (83), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 86/197 (43%), Gaps = 29/197 (14%)
Query: 527 FSIQSKLGEGGFGPVYKGRLLNGQE-VAVKRLSNQSGQGLK-EFKNEMMLIAKLQHRNLV 584
+ + LG G F V Q+ VA+K ++ ++ +G + +NE+ ++ K++H N+V
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 585 RLLGCCIEQGEKILI---------YEYMVNKS---------LDVFLFDPTKK-HLLGW-- 623
L G LI ++ +V K L + D K H LG
Sbjct: 80 ALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVH 139
Query: 624 -QLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNT-KRIVGTYGYMSPEYALEGVF 681
L+ + + D+ ISDFG+++M E G+ GT GY++PE + +
Sbjct: 140 RDLKPENLLYYSLDEDSKIMISDFGLSKM----EDPGSVLSTACGTPGYVAPEVLAQKPY 195
Query: 682 SVKSDVFSFGVLMLEIL 698
S D +S GV+ +L
Sbjct: 196 SKAVDCWSIGVIAYILL 212
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 36.6 bits (83), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 82/202 (40%), Gaps = 28/202 (13%)
Query: 521 TAATENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFK---NEMMLIA 576
TA + F LG G FG V + +G A+K L Q LK+ + NE ++
Sbjct: 37 TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 577 KLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFL------FDPTKK------------ 618
+ LV+L + ++ EY+ + L +P +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEY 156
Query: 619 -HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYAL 677
H L R + + DQ +++DFG A+ ++G T + GT Y++PE L
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIIL 211
Query: 678 EGVFSVKSDVFSFGVLMLEILS 699
++ D ++ GVL+ E+ +
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAA 233
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 36.6 bits (83), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 82/202 (40%), Gaps = 28/202 (13%)
Query: 521 TAATENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFK---NEMMLIA 576
TA + F LG G FG V + +G A+K L Q LK+ + NE ++
Sbjct: 32 TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 91
Query: 577 KLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFL------FDPTKK------------ 618
+ LV+L + ++ EY+ + L +P +
Sbjct: 92 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEY 151
Query: 619 -HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYAL 677
H L R + + DQ +++DFG A+ ++G T + GT Y++PE L
Sbjct: 152 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIIL 206
Query: 678 EGVFSVKSDVFSFGVLMLEILS 699
++ D ++ GVL+ E+ +
Sbjct: 207 SKGYNKAVDWWALGVLIYEMAA 228
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 36.6 bits (83), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 82/202 (40%), Gaps = 28/202 (13%)
Query: 521 TAATENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFK---NEMMLIA 576
TA + F LG G FG V + +G A+K L Q LK+ + NE ++
Sbjct: 37 TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 577 KLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLF------DPTKK------------ 618
+ LV+L + ++ EY+ + L +P +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 619 -HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYAL 677
H L R + + DQ +++DFG A+ ++G T + GT Y++PE L
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLAGTPEYLAPEIIL 211
Query: 678 EGVFSVKSDVFSFGVLMLEILS 699
++ D ++ GVL+ E+ +
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAA 233
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 36.6 bits (83), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 83/205 (40%), Gaps = 28/205 (13%)
Query: 518 ASVTAATENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFK---NEMM 573
A TA + F LG G FG V + + G A+K L Q LK+ + NE
Sbjct: 35 AQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 94
Query: 574 LIAKLQHRNLVRLLGCCIEQGEKILIYEY-----MVNKSLDVFLF-DPTKK--------- 618
++ + L +L + ++ EY M + + F +P +
Sbjct: 95 ILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT 154
Query: 619 ----HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPE 674
H L R + + DQ K++DFG A+ ++G T + GT Y++PE
Sbjct: 155 FEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAPE 209
Query: 675 YALEGVFSVKSDVFSFGVLMLEILS 699
L ++ D ++ GVL+ E+ +
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAA 234
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 36.6 bits (83), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 82/202 (40%), Gaps = 28/202 (13%)
Query: 521 TAATENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFK---NEMMLIA 576
TA + F LG G FG V + +G A+K L Q LK+ + NE ++
Sbjct: 37 TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 577 KLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFL------FDPTKK------------ 618
+ LV+L + ++ EY+ + L +P +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEY 156
Query: 619 -HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYAL 677
H L R + + DQ +++DFG A+ ++G T + GT Y++PE L
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIIL 211
Query: 678 EGVFSVKSDVFSFGVLMLEILS 699
++ D ++ GVL+ E+ +
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAA 233
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 36.6 bits (83), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 88/202 (43%), Gaps = 39/202 (19%)
Query: 531 SKLGEGGFGPVYKGR-----LLNGQEVAVKRLSNQSGQGL--KEFKNEMMLIAKLQHRNL 583
+LG G F V K R L + KR + S +G+ ++ + E+ ++ ++QH N+
Sbjct: 17 EELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 584 VRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLL---GWQLRVRIIDGI-----AQ 635
+ L + + ILI E + L F F K+ L + +I++G+ Q
Sbjct: 77 ITLHEVYENKTDVILILELVAGGEL--FDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ 134
Query: 636 DQH--MNP---------------KISDFGMARMFG-GDELQGNTKRIVGTYGYMSPEYAL 677
H + P KI DFG+A G+E K I GT +++PE
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF----KNIFGTPEFVAPEIVN 190
Query: 678 EGVFSVKSDVFSFGVLMLEILS 699
+++D++S GV+ +LS
Sbjct: 191 YEPLGLEADMWSIGVITYILLS 212
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 36.6 bits (83), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 83/205 (40%), Gaps = 28/205 (13%)
Query: 518 ASVTAATENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFK---NEMM 573
A TA + F LG G FG V + G A+K L Q LK+ + NE
Sbjct: 35 AQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKR 94
Query: 574 LIAKLQHRNLVRLLGCCIEQGEKILIYEY-----MVNKSLDVFLF-DPTKK--------- 618
++ + LV+L + ++ EY M + + F +P +
Sbjct: 95 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT 154
Query: 619 ----HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPE 674
H L R + + DQ K++DFG A+ ++G T + GT Y++PE
Sbjct: 155 FEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAPE 209
Query: 675 YALEGVFSVKSDVFSFGVLMLEILS 699
L ++ D ++ GVL+ E+ +
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAA 234
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 36.6 bits (83), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 88/202 (43%), Gaps = 39/202 (19%)
Query: 531 SKLGEGGFGPVYKGR-----LLNGQEVAVKRLSNQSGQGL--KEFKNEMMLIAKLQHRNL 583
+LG G F V K R L + KR + S +G+ ++ + E+ ++ ++QH N+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 584 VRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLL---GWQLRVRIIDGI-----AQ 635
+ L + + ILI E + L F F K+ L + +I++G+ Q
Sbjct: 77 ITLHEVYENKTDVILILELVAGGEL--FDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ 134
Query: 636 DQH--MNP---------------KISDFGMARMFG-GDELQGNTKRIVGTYGYMSPEYAL 677
H + P KI DFG+A G+E K I GT +++PE
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF----KNIFGTPEFVAPEIVN 190
Query: 678 EGVFSVKSDVFSFGVLMLEILS 699
+++D++S GV+ +LS
Sbjct: 191 YEPLGLEADMWSIGVITYILLS 212
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 36.6 bits (83), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 82/202 (40%), Gaps = 28/202 (13%)
Query: 521 TAATENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFK---NEMMLIA 576
TA + F LG G FG V + +G A+K L Q LK+ + NE ++
Sbjct: 58 TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 117
Query: 577 KLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFL------FDPTKK------------ 618
+ LV+L + ++ EY+ + L +P +
Sbjct: 118 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEY 177
Query: 619 -HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYAL 677
H L R + + DQ +++DFG A+ ++G T + GT Y++PE L
Sbjct: 178 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIIL 232
Query: 678 EGVFSVKSDVFSFGVLMLEILS 699
++ D ++ GVL+ E+ +
Sbjct: 233 SKGYNKAVDWWALGVLIYEMAA 254
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 36.2 bits (82), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 88/202 (43%), Gaps = 39/202 (19%)
Query: 531 SKLGEGGFGPVYKGR-----LLNGQEVAVKRLSNQSGQGL--KEFKNEMMLIAKLQHRNL 583
+LG G F V K R L + KR + S +G+ ++ + E+ ++ ++QH N+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 584 VRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLL---GWQLRVRIIDGI-----AQ 635
+ L + + ILI E + L F F K+ L + +I++G+ Q
Sbjct: 77 ITLHEVYENKTDVILILELVAGGEL--FDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ 134
Query: 636 DQH--MNP---------------KISDFGMARMFG-GDELQGNTKRIVGTYGYMSPEYAL 677
H + P KI DFG+A G+E K I GT +++PE
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF----KNIFGTPEFVAPEIVN 190
Query: 678 EGVFSVKSDVFSFGVLMLEILS 699
+++D++S GV+ +LS
Sbjct: 191 YEPLGLEADMWSIGVITYILLS 212
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 36.2 bits (82), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 86/197 (43%), Gaps = 29/197 (14%)
Query: 527 FSIQSKLGEGGFGPVYKGRLLNGQE-VAVKRLSNQSGQGLK-EFKNEMMLIAKLQHRNLV 584
+ + LG G F V Q+ VA+K ++ ++ +G + +NE+ ++ K++H N+V
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 585 RLLGCCIEQGEKILI---------YEYMVNKS---------LDVFLFDPTKK-HLLGW-- 623
L G LI ++ +V K L + D K H LG
Sbjct: 80 ALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVH 139
Query: 624 -QLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNT-KRIVGTYGYMSPEYALEGVF 681
L+ + + D+ ISDFG+++M E G+ GT GY++PE + +
Sbjct: 140 RDLKPENLLYYSLDEDSKIMISDFGLSKM----EDPGSVLSTACGTPGYVAPEVLAQKPY 195
Query: 682 SVKSDVFSFGVLMLEIL 698
S D +S GV+ +L
Sbjct: 196 SKAVDCWSIGVIAYILL 212
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 36.2 bits (82), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 88/202 (43%), Gaps = 39/202 (19%)
Query: 531 SKLGEGGFGPVYKGR-----LLNGQEVAVKRLSNQSGQGL--KEFKNEMMLIAKLQHRNL 583
+LG G F V K R L + KR + S +G+ ++ + E+ ++ ++QH N+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 584 VRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLL---GWQLRVRIIDGI-----AQ 635
+ L + + ILI E + L F F K+ L + +I++G+ Q
Sbjct: 77 ITLHEVYENKTDVILILELVAGGEL--FDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ 134
Query: 636 DQH--MNP---------------KISDFGMARMFG-GDELQGNTKRIVGTYGYMSPEYAL 677
H + P KI DFG+A G+E K I GT +++PE
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF----KNIFGTPEFVAPEIVN 190
Query: 678 EGVFSVKSDVFSFGVLMLEILS 699
+++D++S GV+ +LS
Sbjct: 191 YEPLGLEADMWSIGVITYILLS 212
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 36.2 bits (82), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 86/197 (43%), Gaps = 29/197 (14%)
Query: 527 FSIQSKLGEGGFGPVYKGRLLNGQE-VAVKRLSNQSGQGLK-EFKNEMMLIAKLQHRNLV 584
+ + LG G F V Q+ VA+K ++ ++ +G + +NE+ ++ K++H N+V
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 585 RLLGCCIEQGEKILI---------YEYMVNKS---------LDVFLFDPTKK-HLLGW-- 623
L G LI ++ +V K L + D K H LG
Sbjct: 80 ALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVH 139
Query: 624 -QLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNT-KRIVGTYGYMSPEYALEGVF 681
L+ + + D+ ISDFG+++M E G+ GT GY++PE + +
Sbjct: 140 RDLKPENLLYYSLDEDSKIMISDFGLSKM----EDPGSVLSTACGTPGYVAPEVLAQKPY 195
Query: 682 SVKSDVFSFGVLMLEIL 698
S D +S GV+ +L
Sbjct: 196 SKAVDCWSIGVIAYILL 212
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 36.2 bits (82), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 95/207 (45%), Gaps = 47/207 (22%)
Query: 531 SKLGEGGFGPVYKGR-LLNGQEVAVKRL---SNQSGQGLKEFKNEMMLIAKLQHRNLVRL 586
+K+G+G FG V+K R GQ+VA+K++ + + G + + E+ ++ L+H N+V L
Sbjct: 24 AKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR-EIKILQLLKHENVVNL 82
Query: 587 LGCCIEQGEK--------ILIYEY-------MVNKSLDVFLFDPTKKHL------LGWQL 625
+ C + L++++ +++ L F K+ + L +
Sbjct: 83 IEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH 142
Query: 626 RVRIIDG--------IAQDQHMNPKISDFGMARMFGGDELQGNTK------RIVGTYGYM 671
R +I+ I +D + K++DFG+AR F L N++ R+V T Y
Sbjct: 143 RNKILHRDMKAANVLITRDGVL--KLADFGLARAFS---LAKNSQPNRYXNRVV-TLWYR 196
Query: 672 SPEYAL-EGVFSVKSDVFSFGVLMLEI 697
PE L E + D++ G +M E+
Sbjct: 197 PPELLLGERDYGPPIDLWGAGCIMAEM 223
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 36.2 bits (82), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 82/205 (40%), Gaps = 28/205 (13%)
Query: 518 ASVTAATENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFK---NEMM 573
A TA + F LG G FG V + G A+K L Q LK+ + NE
Sbjct: 27 AQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKR 86
Query: 574 LIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFL------FDPTKK--------- 618
++ + LV+L + ++ EY+ + L +P +
Sbjct: 87 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLT 146
Query: 619 ----HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPE 674
H L R + + DQ +++DFG A+ ++G T + GT Y++PE
Sbjct: 147 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPE 201
Query: 675 YALEGVFSVKSDVFSFGVLMLEILS 699
L ++ D ++ GVL+ E+ +
Sbjct: 202 IILSKGYNKAVDWWALGVLIYEMAA 226
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 36.2 bits (82), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 88/202 (43%), Gaps = 39/202 (19%)
Query: 531 SKLGEGGFGPVYKGR-----LLNGQEVAVKRLSNQSGQGL--KEFKNEMMLIAKLQHRNL 583
+LG G F V K R L + KR + S +G+ ++ + E+ ++ ++QH N+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 584 VRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLL---GWQLRVRIIDGI-----AQ 635
+ L + + ILI E + L F F K+ L + +I++G+ Q
Sbjct: 77 ITLHEVYENKTDVILILELVAGGEL--FDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ 134
Query: 636 DQH--MNP---------------KISDFGMARMFG-GDELQGNTKRIVGTYGYMSPEYAL 677
H + P KI DFG+A G+E K I GT +++PE
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF----KNIFGTPEFVAPEIVN 190
Query: 678 EGVFSVKSDVFSFGVLMLEILS 699
+++D++S GV+ +LS
Sbjct: 191 YEPLGLEADMWSIGVITYILLS 212
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 36.2 bits (82), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 82/202 (40%), Gaps = 28/202 (13%)
Query: 521 TAATENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFK---NEMMLIA 576
TA + F LG G FG V + +G A+K L Q LK+ + NE ++
Sbjct: 37 TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 577 KLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFL------FDPTKK------------ 618
+ LV+L + ++ EY+ + L +P +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFEY 156
Query: 619 -HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYAL 677
H L R + + DQ +++DFG A+ ++G T + GT Y++PE L
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIIL 211
Query: 678 EGVFSVKSDVFSFGVLMLEILS 699
++ D ++ GVL+ E+ +
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAA 233
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 36.2 bits (82), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 82/202 (40%), Gaps = 28/202 (13%)
Query: 521 TAATENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFK---NEMMLIA 576
TA + F LG G FG V + +G A+K L Q LK+ + NE ++
Sbjct: 37 TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 577 KLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLF------DPTKK------------ 618
+ LV+L + ++ EY+ + L +P +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 619 -HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYAL 677
H L R + + DQ +++DFG A+ ++G T + GT Y++PE L
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIIL 211
Query: 678 EGVFSVKSDVFSFGVLMLEILS 699
++ D ++ GVL+ E+ +
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAA 233
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 36.2 bits (82), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 88/202 (43%), Gaps = 39/202 (19%)
Query: 531 SKLGEGGFGPVYKGR-----LLNGQEVAVKRLSNQSGQGL--KEFKNEMMLIAKLQHRNL 583
+LG G F V K R L + KR + S +G+ ++ + E+ ++ ++QH N+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 584 VRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLL---GWQLRVRIIDGI-----AQ 635
+ L + + ILI E + L F F K+ L + +I++G+ Q
Sbjct: 77 ITLHEVYENKTDVILILELVAGGEL--FDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ 134
Query: 636 DQH--MNP---------------KISDFGMARMFG-GDELQGNTKRIVGTYGYMSPEYAL 677
H + P KI DFG+A G+E K I GT +++PE
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF----KNIFGTPEFVAPEIVN 190
Query: 678 EGVFSVKSDVFSFGVLMLEILS 699
+++D++S GV+ +LS
Sbjct: 191 YEPLGLEADMWSIGVITYILLS 212
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 36.2 bits (82), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 82/202 (40%), Gaps = 28/202 (13%)
Query: 521 TAATENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFK---NEMMLIA 576
TA + F LG G FG V + +G A+K L Q LK+ + NE ++
Sbjct: 37 TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 577 KLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLF------DPTKK------------ 618
+ LV+L + ++ EY+ + L +P +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 619 -HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYAL 677
H L R + + DQ +++DFG A+ ++G T + GT Y++PE L
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLXGTPEYLAPEIIL 211
Query: 678 EGVFSVKSDVFSFGVLMLEILS 699
++ D ++ GVL+ E+ +
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAA 233
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 36.2 bits (82), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 82/202 (40%), Gaps = 28/202 (13%)
Query: 521 TAATENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFK---NEMMLIA 576
TA + F LG G FG V + +G A+K L Q LK+ + NE ++
Sbjct: 37 TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 577 KLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLF------DPTKK------------ 618
+ LV+L + ++ EY+ + L +P +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 619 -HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYAL 677
H L R + + DQ +++DFG A+ ++G T + GT Y++PE L
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIIL 211
Query: 678 EGVFSVKSDVFSFGVLMLEILS 699
++ D ++ GVL+ E+ +
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAA 233
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 36.2 bits (82), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 87/208 (41%), Gaps = 30/208 (14%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRL-LNGQEVAVKRLSNQSG--QGLKEFKNEMMLIAKLQHR 581
+ + I +G G +G V R L GQ+VA+K++ N K E+ ++ +H
Sbjct: 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHD 113
Query: 582 NLVR---LLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLR---VRIIDGI-- 633
N++ +L + GE +Y + D+ + + L +R +++ G+
Sbjct: 114 NIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKY 173
Query: 634 ---AQDQH--MNP-----------KISDFGMARMF--GGDELQGNTKRIVGTYGYMSPEY 675
AQ H + P KI DFGMAR E Q V T Y +PE
Sbjct: 174 MHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPEL 233
Query: 676 ALE-GVFSVKSDVFSFGVLMLEILSSKK 702
L ++ D++S G + E+L+ ++
Sbjct: 234 MLSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 36.2 bits (82), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 82/202 (40%), Gaps = 28/202 (13%)
Query: 521 TAATENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFK---NEMMLIA 576
TA + F LG G FG V + +G A+K L Q LK+ + NE ++
Sbjct: 37 TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 577 KLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLF------DPTKK------------ 618
+ LV+L + ++ EY+ + L +P +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 619 -HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYAL 677
H L R + + DQ +++DFG A+ ++G T + GT Y++PE L
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIIL 211
Query: 678 EGVFSVKSDVFSFGVLMLEILS 699
++ D ++ GVL+ E+ +
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAA 233
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 36.2 bits (82), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 81/202 (40%), Gaps = 49/202 (24%)
Query: 533 LGEGGFGPVYKGRLLN-GQEVAVKRLSNQS-----GQGLKEFKNEMMLIAKLQHRNLVRL 586
LG+G V++GR G A+K +N S ++EF+ ++ KL H+N+V+L
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFE----VLKKLNHKNIVKL 72
Query: 587 LGCCIEQG--EKILIYEYMVNKSLDVFLFDPTKKH-------------LLGWQLRVR--- 628
E K+LI E+ SL L +P+ + ++G +R
Sbjct: 73 FAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG 132
Query: 629 ----------IIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALE 678
I+ I +D K++DFG AR DE + GT Y+ P+
Sbjct: 133 IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE---QFVSLYGTEEYLHPDMYER 189
Query: 679 GV--------FSVKSDVFSFGV 692
V + D++S GV
Sbjct: 190 AVLRKDHQKKYGATVDLWSIGV 211
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 36.2 bits (82), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 86/197 (43%), Gaps = 29/197 (14%)
Query: 527 FSIQSKLGEGGFGPVYKGRLLNGQE-VAVKRLSNQSGQGLK-EFKNEMMLIAKLQHRNLV 584
+ + LG G F V Q+ VA+K ++ ++ +G + +NE+ ++ K++H N+V
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 585 RLLGCCIEQGEKILI---------YEYMVNKS---------LDVFLFDPTKK-HLLGW-- 623
L G LI ++ +V K L + D K H LG
Sbjct: 80 ALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVH 139
Query: 624 -QLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNT-KRIVGTYGYMSPEYALEGVF 681
L+ + + D+ ISDFG+++M E G+ GT GY++PE + +
Sbjct: 140 RDLKPENLLYYSLDEDSKIMISDFGLSKM----EDPGSVLSTACGTPGYVAPEVLAQKPY 195
Query: 682 SVKSDVFSFGVLMLEIL 698
S D +S GV+ +L
Sbjct: 196 SKAVDCWSIGVIAYILL 212
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 36.2 bits (82), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 82/202 (40%), Gaps = 28/202 (13%)
Query: 521 TAATENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFK---NEMMLIA 576
TA + F LG G FG V + +G A+K L Q LK+ + NE ++
Sbjct: 37 TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 577 KLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLF------DPTKK------------ 618
+ LV+L + ++ EY+ + L +P +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 619 -HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYAL 677
H L R + + DQ +++DFG A+ ++G T + GT Y++PE L
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIIL 211
Query: 678 EGVFSVKSDVFSFGVLMLEILS 699
++ D ++ GVL+ E+ +
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAA 233
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 36.2 bits (82), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 82/202 (40%), Gaps = 28/202 (13%)
Query: 521 TAATENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFK---NEMMLIA 576
TA + F LG G FG V + +G A+K L Q LK+ + NE ++
Sbjct: 37 TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 577 KLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLF------DPTKK------------ 618
+ LV+L + ++ EY+ + L +P +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 619 -HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYAL 677
H L R + + DQ +++DFG A+ ++G T + GT Y++PE L
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIIL 211
Query: 678 EGVFSVKSDVFSFGVLMLEILS 699
++ D ++ GVL+ E+ +
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAA 233
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 36.2 bits (82), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 82/202 (40%), Gaps = 28/202 (13%)
Query: 521 TAATENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFK---NEMMLIA 576
TA + F LG G FG V + +G A+K L Q LK+ + NE ++
Sbjct: 38 TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 97
Query: 577 KLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLF------DPTKK------------ 618
+ LV+L + ++ EY+ + L +P +
Sbjct: 98 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 157
Query: 619 -HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYAL 677
H L R + + DQ +++DFG A+ ++G T + GT Y++PE L
Sbjct: 158 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIIL 212
Query: 678 EGVFSVKSDVFSFGVLMLEILS 699
++ D ++ GVL+ E+ +
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAA 234
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 35.8 bits (81), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 88/202 (43%), Gaps = 39/202 (19%)
Query: 531 SKLGEGGFGPVYKGR-----LLNGQEVAVKRLSNQSGQGL--KEFKNEMMLIAKLQHRNL 583
+LG G F V K R L + KR + S +G+ ++ + E+ ++ ++QH N+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 584 VRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLL---GWQLRVRIIDGI-----AQ 635
+ L + + ILI E + L F F K+ L + +I++G+ Q
Sbjct: 77 ITLHEVYENKTDVILIGELVAGGEL--FDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ 134
Query: 636 DQH--MNP---------------KISDFGMARMFG-GDELQGNTKRIVGTYGYMSPEYAL 677
H + P KI DFG+A G+E K I GT +++PE
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF----KNIFGTPEFVAPEIVN 190
Query: 678 EGVFSVKSDVFSFGVLMLEILS 699
+++D++S GV+ +LS
Sbjct: 191 YEPLGLEADMWSIGVITYILLS 212
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 81/202 (40%), Gaps = 49/202 (24%)
Query: 533 LGEGGFGPVYKGRLLN-GQEVAVKRLSNQS-----GQGLKEFKNEMMLIAKLQHRNLVRL 586
LG+G V++GR G A+K +N S ++EF+ ++ KL H+N+V+L
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFE----VLKKLNHKNIVKL 72
Query: 587 LGCCIEQG--EKILIYEYMVNKSLDVFLFDPTK-------------KHLLGWQLRVR--- 628
E K+LI E+ SL L +P+ + ++G +R
Sbjct: 73 FAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG 132
Query: 629 ----------IIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALE 678
I+ I +D K++DFG AR DE + GT Y+ P+
Sbjct: 133 IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE---QFVXLYGTEEYLHPDMYER 189
Query: 679 GV--------FSVKSDVFSFGV 692
V + D++S GV
Sbjct: 190 AVLRKDHQKKYGATVDLWSIGV 211
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 82/205 (40%), Gaps = 28/205 (13%)
Query: 518 ASVTAATENFSIQSKLGEGGFGPVYKGRLLN-GQEVAVKRLSNQSGQGLKEFK---NEMM 573
A TA + F LG G FG V + G A+K L Q LK+ + NE
Sbjct: 27 AQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKR 86
Query: 574 LIAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLF------DPTKK--------- 618
++ + LV+L + ++ EY+ + L +P +
Sbjct: 87 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT 146
Query: 619 ----HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPE 674
H L R + + DQ +++DFG A+ ++G T + GT Y++PE
Sbjct: 147 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPE 201
Query: 675 YALEGVFSVKSDVFSFGVLMLEILS 699
L ++ D ++ GVL+ E+ +
Sbjct: 202 IILSKGYNKAVDWWALGVLIYEMAA 226
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 50/103 (48%), Gaps = 20/103 (19%)
Query: 597 ILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDE 656
+L +EY+ SLD+ D ++LL DQ +++DFG A+
Sbjct: 151 VLTFEYL--HSLDLIYRDLKPENLL-------------IDQQGYIQVTDFGFAK-----R 190
Query: 657 LQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS 699
++G T + GT Y++PE L ++ D ++ GVL+ E+ +
Sbjct: 191 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 50/103 (48%), Gaps = 20/103 (19%)
Query: 597 ILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDE 656
+L +EY+ SLD+ D ++LL DQ +++DFG A+
Sbjct: 151 VLTFEYL--HSLDLIYRDLKPENLL-------------IDQQGYIQVTDFGFAK-----R 190
Query: 657 LQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS 699
++G T + GT Y++PE L ++ D ++ GVL+ E+ +
Sbjct: 191 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 50/103 (48%), Gaps = 20/103 (19%)
Query: 597 ILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDE 656
+L +EY+ SLD+ D ++LL DQ +++DFG A+
Sbjct: 172 VLTFEYL--HSLDLIYRDLKPENLL-------------IDQQGYIQVTDFGFAK-----R 211
Query: 657 LQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS 699
++G T + GT Y++PE L ++ D ++ GVL+ E+ +
Sbjct: 212 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 254
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 50/103 (48%), Gaps = 20/103 (19%)
Query: 597 ILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDE 656
+L +EY+ SLD+ D ++LL DQ +++DFG A+
Sbjct: 152 VLTFEYL--HSLDLIYRDLKPENLL-------------IDQQGYIQVTDFGFAK-----R 191
Query: 657 LQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS 699
++G T + GT Y++PE L ++ D ++ GVL+ E+ +
Sbjct: 192 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 234
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 50/103 (48%), Gaps = 20/103 (19%)
Query: 597 ILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDE 656
+L +EY+ SLD+ D ++LL DQ +++DFG A+
Sbjct: 152 VLTFEYL--HSLDLIYRDLKPENLL-------------IDQQGYIQVTDFGFAK-----R 191
Query: 657 LQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS 699
++G T + GT Y++PE L ++ D ++ GVL+ E+ +
Sbjct: 192 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 234
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 50/103 (48%), Gaps = 20/103 (19%)
Query: 597 ILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDE 656
+L +EY+ SLD+ D ++LL DQ +++DFG A+
Sbjct: 152 VLTFEYL--HSLDLIYRDLKPENLL-------------IDQQGYIQVTDFGFAK-----R 191
Query: 657 LQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS 699
++G T + GT Y++PE L ++ D ++ GVL+ E+ +
Sbjct: 192 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 234
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 50/103 (48%), Gaps = 20/103 (19%)
Query: 597 ILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDE 656
+L +EY+ SLD+ D ++LL DQ +++DFG A+
Sbjct: 151 VLTFEYL--HSLDLIYRDLKPENLL-------------IDQQGYIQVTDFGFAK-----R 190
Query: 657 LQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS 699
++G T + GT Y++PE L ++ D ++ GVL+ E+ +
Sbjct: 191 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 127/312 (40%), Gaps = 65/312 (20%)
Query: 519 SVTAATENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFKNEMMLIAK 577
S+ ++ +LG G +G V K R + +GQ +AVKR+ + + +++
Sbjct: 1 SMEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNS---QEQKRLLMDLD 57
Query: 578 LQHRNL-----VRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKK------HLLGWQLR 626
+ R + V G +G+ + E M + SLD F K +LG ++
Sbjct: 58 ISMRTVDCPFTVTFYGALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILG-KIA 115
Query: 627 VRIIDGIAQDQHMNPKIS--------------DFGMARM--FG--GDELQGNTKRI-VGT 667
V I+ + +H++ K+S G +M FG G + K I G
Sbjct: 116 VSIVKAL---EHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGC 172
Query: 668 YGYMSPEYALEGV----FSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCK 723
YM+PE + +SVKSD++S G+ M+E+ + + DS W
Sbjct: 173 KPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILR-----FPYDS-------WGTPF 220
Query: 724 NDRAHELMDPVLQNEVSLP---MLVRYINVALLCVQENAEDRPTMSDVVSMINNELFNLP 780
+ +P Q LP +++ C+++N+++RPT + ++ + F L
Sbjct: 221 QQLKQVVEEPSPQ----LPADKFSAEFVDFTSQCLKKNSKERPTYPE---LMQHPFFTLH 273
Query: 781 SPKEPPFTTFTK 792
K +F K
Sbjct: 274 ESKGTDVASFVK 285
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 95/232 (40%), Gaps = 45/232 (19%)
Query: 533 LGEGGFGPVYKG-RLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQ-HRNLVRLLGCC 590
LGEG V L+ QE AVK + Q G E+ ++ + Q HRN++ L+
Sbjct: 21 LGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFF 80
Query: 591 IEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIID-----------GIAQD--- 636
E+ L++E M S+ + ++H + V + D GIA
Sbjct: 81 EEEDRFYLVFEKMRGGSILSHIH--KRRHFNELEASVVVQDVASALDFLHNKGIAHRDLK 138
Query: 637 ------QHMNP----KISDFGMARMFGGDELQGNTKRI--------VGTYGYMSPE---- 674
+H N KI DFG+ G +L G+ I G+ YM+PE
Sbjct: 139 PENILCEHPNQVSPVKICDFGLG---SGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEA 195
Query: 675 YALEG-VFSVKSDVFSFGVLMLEILSSKKN-TGVYNTDSFNLLGHAWSLCKN 724
++ E ++ + D++S GV++ +LS G +D G A C+N
Sbjct: 196 FSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQN 247
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 99/253 (39%), Gaps = 43/253 (16%)
Query: 518 ASVTAATENFSIQSKLGEGGFGPVYKGRL-----LNGQEVAVKRLSNQSGQGLKEFKNEM 572
AS + ++F + +G G + V RL + +V K L N + + + E
Sbjct: 13 ASSSLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDD-EDIDWVQTEK 71
Query: 573 MLIAKLQ-HRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKK------------- 618
+ + H LV L C + + EY VN +F +K
Sbjct: 72 HVFEQASNHPFLVGLHSCFQTESRLFFVIEY-VNGGDLMFHMQRQRKLPEEHARFYSAEI 130
Query: 619 -------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMAR--MFGGDELQGNTKRIVGTYG 669
H G R +D + D + K++D+GM + + GD T GT
Sbjct: 131 SLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD----TTSXFCGTPN 186
Query: 670 YMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHE 729
Y++PE + D ++ GVLM E+++ + F+++G + + +N +
Sbjct: 187 YIAPEILRGEDYGFSVDWWALGVLMFEMMAGRS--------PFDIVGSSDNPDQNTEDY- 237
Query: 730 LMDPVLQNEVSLP 742
L +L+ ++ +P
Sbjct: 238 LFQVILEKQIRIP 250
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 90/204 (44%), Gaps = 38/204 (18%)
Query: 527 FSIQSKLGEGGFGPV-----YKGRLLNGQEVAVKRLSNQ----SGQGLKEFKNEMMLIAK 577
+ I+ LGEG FG V YK + Q+VA+K +S Q S ++ + E+ +
Sbjct: 11 YIIRETLGEGSFGKVKLATHYKTQ----QKVALKFISRQLLKKSDMHMR-VEREISYLKL 65
Query: 578 LQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRII------- 630
L+H ++++L + +++ EY + D + G + +II
Sbjct: 66 LRHPHIIKLYDVITTPTDIVMVIEYAGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCH 125
Query: 631 -----------DGIAQDQHMNPKISDFGMARMFGGDELQGN-TKRIVGTYGYMSPEYALE 678
+ + D ++N KI+DFG++ + GN K G+ Y +PE
Sbjct: 126 RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMT----DGNFLKTSCGSPNYAAPEVING 181
Query: 679 GVFS-VKSDVFSFGVLMLEILSSK 701
+++ + DV+S G+++ +L +
Sbjct: 182 KLYAGPEVDVWSCGIVLYVMLVGR 205
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 83/206 (40%), Gaps = 43/206 (20%)
Query: 524 TENFSIQSKLGEGGFGPVYKGRLLNGQE----VAVKRLSNQSGQGLKE-FKNEMMLIAKL 578
++ + + +G G FG RL+ ++ VAVK + + G+ + E K E++ L
Sbjct: 17 SDRYELVKDIGSGNFG---VARLMRDKQSNELVAVKYI--ERGEKIDENVKREIINHRSL 71
Query: 579 QHRNLVRLLGCCIEQGEKILIYEY-----MVNKSLDVFLFDPTKKHLLGWQLRVRIIDGI 633
+H N+VR + ++ EY + + + F + QL I G+
Sbjct: 72 RHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL----ISGV 127
Query: 634 AQDQHMNP--------------------KISDFGMARMFGGDELQGNTKRIVGTYGYMSP 673
+ M KI DFG ++ L K VGT Y++P
Sbjct: 128 SYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSK---SSVLHSQPKSTVGTPAYIAP 184
Query: 674 EYALEGVFSVK-SDVFSFGVLMLEIL 698
E L+ + K +DV+S GV + +L
Sbjct: 185 EVLLKKEYDGKVADVWSCGVTLYVML 210
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 82/202 (40%), Gaps = 28/202 (13%)
Query: 521 TAATENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFK---NEMMLIA 576
TA + F LG G FG V + +G A+K L Q LK+ + NE ++
Sbjct: 37 TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 577 KLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLF------DPTKK------------ 618
+ LV+L + ++ EY+ + L +P +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 619 -HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYAL 677
H L R + + DQ +++DFG A+ ++G T + GT Y++PE +
Sbjct: 157 LHSLDLIYRDLKPENLIIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIII 211
Query: 678 EGVFSVKSDVFSFGVLMLEILS 699
++ D ++ GVL+ E+ +
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAA 233
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 82/202 (40%), Gaps = 28/202 (13%)
Query: 521 TAATENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFK---NEMMLIA 576
TA + F LG G FG V + +G A+K L Q LK+ + NE ++
Sbjct: 58 TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 117
Query: 577 KLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLF------DPTKK------------ 618
+ LV+L + ++ EY+ + L +P +
Sbjct: 118 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 177
Query: 619 -HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYAL 677
H L R + + DQ +++DFG A+ ++G T + GT Y++PE L
Sbjct: 178 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGATWTLCGTPEYLAPEIIL 232
Query: 678 EGVFSVKSDVFSFGVLMLEILS 699
++ D ++ GVL+ E+ +
Sbjct: 233 SKGYNKAVDWWALGVLIYEMAA 254
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 98/253 (38%), Gaps = 43/253 (16%)
Query: 518 ASVTAATENFSIQSKLGEGGFGPVYKGRL-----LNGQEVAVKRLSNQSGQGLKEFKNEM 572
AS + ++F + +G G + V RL + V K L N + + + E
Sbjct: 45 ASSSLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDD-EDIDWVQTEK 103
Query: 573 MLIAKLQ-HRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKK------------- 618
+ + H LV L C + + EY VN +F +K
Sbjct: 104 HVFEQASNHPFLVGLHSCFQTESRLFFVIEY-VNGGDLMFHMQRQRKLPEEHARFYSAEI 162
Query: 619 -------HLLGWQLRVRIIDGIAQDQHMNPKISDFGMAR--MFGGDELQGNTKRIVGTYG 669
H G R +D + D + K++D+GM + + GD T GT
Sbjct: 163 SLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD----TTSTFCGTPN 218
Query: 670 YMSPEYALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHE 729
Y++PE + D ++ GVLM E+++ + F+++G + + +N +
Sbjct: 219 YIAPEILRGEDYGFSVDWWALGVLMFEMMAGRS--------PFDIVGSSDNPDQNTEDY- 269
Query: 730 LMDPVLQNEVSLP 742
L +L+ ++ +P
Sbjct: 270 LFQVILEKQIRIP 282
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 78/171 (45%), Gaps = 22/171 (12%)
Query: 642 KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFSFGVLMLEILS-S 700
KI DFGM+R G + I+GT Y++PE + +D+++ G++ +L+ +
Sbjct: 174 KIVDFGMSRKIGH---ACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHT 230
Query: 701 KKNTGVYNTDSF-NLLGHAWSLCKNDRAHELMDPVLQNEVSLPMLVRYINVALLCVQENA 759
G N +++ N+ S D + E V Q + +I L+ +N
Sbjct: 231 SPFVGEDNQETYLNI-----SQVNVDYSEETFSSVSQ------LATDFIQSLLV---KNP 276
Query: 760 EDRPTMSDVVS---MINNELFNLPSPKEPPFTTFTKGKNMKYSSNSTSGTS 807
E RPT +S + + NL P+E ++ T+ +++ S + TS +S
Sbjct: 277 EKRPTAEICLSHSWLQQWDFENLFHPEETSSSSQTQDHSVRSSEDKTSKSS 327
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 82/202 (40%), Gaps = 28/202 (13%)
Query: 521 TAATENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFK---NEMMLIA 576
TA + F LG G FG V + +G A+K L Q LK+ + NE ++
Sbjct: 24 TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 83
Query: 577 KLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLF------DPTKK------------ 618
+ LV+L + ++ EY+ + L +P +
Sbjct: 84 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 143
Query: 619 -HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYAL 677
H L R + + D+ +++DFG A+ ++G T + GT Y++PE L
Sbjct: 144 LHSLDLIYRDLKPENLLIDEQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIIL 198
Query: 678 EGVFSVKSDVFSFGVLMLEILS 699
++ D ++ GVL+ E+ +
Sbjct: 199 SKGYNKAVDWWALGVLIYEMAA 220
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 82/202 (40%), Gaps = 28/202 (13%)
Query: 521 TAATENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFK---NEMMLIA 576
TA + F LG G FG V + +G A+K L Q LK+ + NE ++
Sbjct: 37 TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 577 KLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLF------DPTKK------------ 618
+ LV+L + ++ EY+ + L +P +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 619 -HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYAL 677
H L R + + DQ +++DFG A+ ++G T + GT Y++PE L
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIIL 211
Query: 678 EGVFSVKSDVFSFGVLMLEILS 699
++ D ++ GVL+ ++ +
Sbjct: 212 SKGYNKAVDWWALGVLIYQMAA 233
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 83/204 (40%), Gaps = 44/204 (21%)
Query: 533 LGEGGFGPVYKGRLLN---GQEVAVK-----RLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
+G+G F V R +N GQ+ AVK + ++ G ++ K E + L+H ++V
Sbjct: 32 IGKGPFSVVR--RCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV 89
Query: 585 RLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGW--------QLRVRIIDG---- 632
LL G +++E+M L F+ K+ G+ +I++
Sbjct: 90 ELLETYSSDGMLYMVFEFMDGADL---CFEIVKRADAGFVYSEAVASHYMRQILEALRYC 146
Query: 633 ----------------IAQDQHMNP-KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEY 675
+A ++ P K+ FG+A G L + VGT +M+PE
Sbjct: 147 HDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGR--VGTPHFMAPEV 204
Query: 676 ALEGVFSVKSDVFSFGVLMLEILS 699
+ DV+ GV++ +LS
Sbjct: 205 VKREPYGKPVDVWGCGVILFILLS 228
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 83/204 (40%), Gaps = 44/204 (21%)
Query: 533 LGEGGFGPVYKGRLLN---GQEVAVK-----RLSNQSGQGLKEFKNEMMLIAKLQHRNLV 584
+G+G F V R +N GQ+ AVK + ++ G ++ K E + L+H ++V
Sbjct: 34 IGKGPFSVVR--RCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV 91
Query: 585 RLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGW--------QLRVRIIDG---- 632
LL G +++E+M L F+ K+ G+ +I++
Sbjct: 92 ELLETYSSDGMLYMVFEFMDGADL---CFEIVKRADAGFVYSEAVASHYMRQILEALRYC 148
Query: 633 ----------------IAQDQHMNP-KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEY 675
+A ++ P K+ FG+A G L + VGT +M+PE
Sbjct: 149 HDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGR--VGTPHFMAPEV 206
Query: 676 ALEGVFSVKSDVFSFGVLMLEILS 699
+ DV+ GV++ +LS
Sbjct: 207 VKREPYGKPVDVWGCGVILFILLS 230
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 58/126 (46%), Gaps = 15/126 (11%)
Query: 619 HLLGWQLRVRIIDGIAQDQHMNPKISDFGMAR--MFGGDELQGNTKRIVGTYGYMSPEYA 676
H G R +D + D + K++D+GM + + GD T GT Y++PE
Sbjct: 123 HERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD----TTSXFCGTPNYIAPEIL 178
Query: 677 LEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQ 736
+ D ++ GVLM E+++ + F+++G + + +N + L +L+
Sbjct: 179 RGEDYGFSVDWWALGVLMFEMMAGRS--------PFDIVGSSDNPDQNTEDY-LFQVILE 229
Query: 737 NEVSLP 742
++ +P
Sbjct: 230 KQIRIP 235
>pdb|1XD5|A Chain A, Crystal Structures Of Novel Monomeric Monocot Mannose-
Binding Lectins From Gastrodia Elata
pdb|1XD5|B Chain B, Crystal Structures Of Novel Monomeric Monocot Mannose-
Binding Lectins From Gastrodia Elata
pdb|1XD5|C Chain C, Crystal Structures Of Novel Monomeric Monocot Mannose-
Binding Lectins From Gastrodia Elata
pdb|1XD5|D Chain D, Crystal Structures Of Novel Monomeric Monocot Mannose-
Binding Lectins From Gastrodia Elata
Length = 112
Score = 34.7 bits (78), Expect = 0.21, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 90 VWVANRNSPIVDKNGVLTVSNRGNLVLLNQSNGTIWSSNVSREVKNPVAQLLDNGNLVIR 149
VW + N VL + N GNLV+ + S IW+SN +R+ N L + N+VI
Sbjct: 40 VWASGTNGKA--SGCVLKMQNDGNLVIYSGSRA-IWASNTNRQNGNYYLILQRDRNVVIY 96
Query: 150 DNSGS 154
DNS +
Sbjct: 97 DNSNN 101
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 34.7 bits (78), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Query: 515 FSFASVTAATENFSIQSKLGEGGFGPV--YKGRLLNGQEVAVKRLSNQSGQGLKEFKNEM 572
F V +++ KLGEGGF V +G L +G A+KR+ Q +E + E
Sbjct: 19 FQGHMVIIDNKHYLFIQKLGEGGFSYVDLVEG-LHDGHFYALKRILCHEQQDREEAQREA 77
Query: 573 MLIAKLQHRNLVRLLGCCI-EQGEK 596
+ H N++RL+ C+ E+G K
Sbjct: 78 DMHRLFNHPNILRLVAYCLRERGAK 102
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 34.7 bits (78), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 58/126 (46%), Gaps = 15/126 (11%)
Query: 619 HLLGWQLRVRIIDGIAQDQHMNPKISDFGMAR--MFGGDELQGNTKRIVGTYGYMSPEYA 676
H G R +D + D + K++D+GM + + GD T GT Y++PE
Sbjct: 127 HERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD----TTSXFCGTPNYIAPEIL 182
Query: 677 LEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSFNLLGHAWSLCKNDRAHELMDPVLQ 736
+ D ++ GVLM E+++ + F+++G + + +N + L +L+
Sbjct: 183 RGEDYGFSVDWWALGVLMFEMMAGRS--------PFDIVGSSDNPDQNTEDY-LFQVILE 233
Query: 737 NEVSLP 742
++ +P
Sbjct: 234 KQIRIP 239
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 34.7 bits (78), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 84/211 (39%), Gaps = 57/211 (27%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNL 583
++F S+LG G +G V+K R +G+ AVKR S + K+ +A++
Sbjct: 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKR----SMSPFRGPKDRARKLAEVGSHEK 112
Query: 584 VRLLGCCI------EQGEKILIYEYMVNKSLDVFLFDPTKKHLLGW-------QLRVRII 630
V CC+ E+G + + + SL ++H W Q+ +
Sbjct: 113 VGQHPCCVRLEQAWEEGGILYLQTELCGPSL--------QQHCEAWGASLPEAQVWGYLR 164
Query: 631 DGIAQDQHMNP---------------------KISDFGMARMFG---GDELQGNTKRIVG 666
D + H++ K+ DFG+ G E+Q R
Sbjct: 165 DTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDPR--- 221
Query: 667 TYGYMSPEYALEGVFSVKSDVFSFGVLMLEI 697
YM+PE L+G + +DVFS G+ +LE+
Sbjct: 222 ---YMAPEL-LQGSYGTAADVFSLGLTILEV 248
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 34.7 bits (78), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 79/202 (39%), Gaps = 38/202 (18%)
Query: 527 FSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEF--KNEMMLIAKLQHRNLV 584
+ I +LG G FG V++ V V + N + L ++ KNE+ ++ +L H L+
Sbjct: 53 YDILEELGSGAFGVVHRCVEKATGRVFVAKFIN-TPYPLDKYTVKNEISIMNQLHHPKLI 111
Query: 585 RLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIIDGIAQD----QHMN 640
L ++ E +LI E++ LFD +I+ + Q +HM+
Sbjct: 112 NLHDAFEDKYEMVLILEFLSGGE----LFDRIAAEDYKMS-EAEVINYMRQACEGLKHMH 166
Query: 641 P-----------------------KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYAL 677
KI DFG+A DE+ K T + +PE
Sbjct: 167 EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEI---VKVTTATAEFAAPEIVD 223
Query: 678 EGVFSVKSDVFSFGVLMLEILS 699
+D+++ GVL +LS
Sbjct: 224 REPVGFYTDMWAIGVLGYVLLS 245
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 34.7 bits (78), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 96/234 (41%), Gaps = 43/234 (18%)
Query: 524 TENFSIQSKLGEGGFGPVYKGRLLNGQEV-AVKRLS-----NQSGQGLKEFKNEMMLIAK 577
E++ + +G G FG V R Q+V A+K LS +S F E ++A
Sbjct: 74 AEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAF--FWEERDIMAF 131
Query: 578 LQHRNLVRLLGCCIEQGEKIL--IYEYMVNKSLDVFL--FDPTKK--------------- 618
+V+L C Q +K L + EYM L + +D +K
Sbjct: 132 ANSPWVVQLF--CAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDA 189
Query: 619 -HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEY-- 675
H +G R D + D+H + K++DFG M + + VGT Y+SPE
Sbjct: 190 IHSMGLIHRDVKPDNMLLDKHGHLKLADFGTC-MKMDETGMVHCDTAVGTPDYISPEVLK 248
Query: 676 --ALEGVFSVKSDVFSFGVLMLEILSSKKNTGVYNTDSF-----NLLGHAWSLC 722
+G + + D +S GV + E+L +T Y DS ++ H SLC
Sbjct: 249 SQGGDGYYGRECDWWSVGVFLFEMLVG--DTPFY-ADSLVGTYSKIMDHKNSLC 299
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 34.7 bits (78), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 82/205 (40%), Gaps = 34/205 (16%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKE-----FKNEMMLIAKLQ 579
E+F I +G G FG V +L N +V ++ N+ + LK F+ E ++
Sbjct: 74 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNK-WEMLKRAETACFREERDVLVNGD 132
Query: 580 HRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKK--------------------H 619
+ + L + L+ +Y V L L + H
Sbjct: 133 SKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVH 192
Query: 620 LLGWQLRVRIIDGIAQDQHMNPKISDFGMA-RMFGGDELQGNTKRIVGTYGYMSPEY--A 676
L + R D I D + + +++DFG ++ +Q + VGT Y+SPE A
Sbjct: 193 QLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVA--VGTPDYISPEILQA 250
Query: 677 LE---GVFSVKSDVFSFGVLMLEIL 698
+E G + + D +S GV M E+L
Sbjct: 251 MEGGKGRYGPECDWWSLGVCMYEML 275
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 33.9 bits (76), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 78/199 (39%), Gaps = 29/199 (14%)
Query: 524 TENFSIQSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKE-FKNEMMLIAKLQHR 581
++ + +G G FG R L + VAVK + + G + E + E++ L+H
Sbjct: 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYI--ERGAAIDENVQREIINHRSLRHP 76
Query: 582 NLVRLLGCCIEQGEKILIYEY-----MVNKSLDVFLFDPTKKHLLGWQL----------- 625
N+VR + +I EY + + + F + QL
Sbjct: 77 NIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQ 136
Query: 626 ---RVRIIDGIAQDQHMNP--KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGV 680
R ++ D P KI DFG ++ L K VGT Y++PE L
Sbjct: 137 ICHRDLKLENTLLDGSPAPRLKICDFGYSK---SSVLHSQPKSTVGTPAYIAPEVLLRQE 193
Query: 681 FSVK-SDVFSFGVLMLEIL 698
+ K +DV+S GV + +L
Sbjct: 194 YDGKIADVWSCGVTLYVML 212
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 33.9 bits (76), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 81/202 (40%), Gaps = 28/202 (13%)
Query: 521 TAATENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFK---NEMMLIA 576
TA + F LG G FG V + +G A+K L Q LK+ + NE ++
Sbjct: 37 TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 577 KLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLF------DPTKK------------ 618
+ LV+L + ++ EY+ + L +P +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 619 -HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYAL 677
H L R + + DQ +++DFG A+ ++G T + GT Y++P L
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPAIIL 211
Query: 678 EGVFSVKSDVFSFGVLMLEILS 699
++ D ++ GVL+ E+ +
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAA 233
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 33.5 bits (75), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 85/197 (43%), Gaps = 37/197 (18%)
Query: 530 QSKLGEGGFGPVYKGR-LLNGQEVAVKRLSNQSGQGLKEFK-NEMMLIAKLQHRNLVRLL 587
Q +LG G FG V++ G + AVK++ L+ F+ E+M A L +V L
Sbjct: 79 QLRLGRGSFGEVHRMEDKQTGFQCAVKKVR------LEVFRAEELMACAGLTSPRIVPLY 132
Query: 588 GCCIEQGEKILIY-EYMVNKSLDVFLFD----PTKKHL--LGWQLR-------VRIIDGI 633
G + +G + I+ E + SL + + P + L LG L RI+ G
Sbjct: 133 GA-VREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGD 191
Query: 634 AQDQHM-------NPKISDFGMARMF-----GGDELQGNTKRIVGTYGYMSPEYALEGVF 681
+ ++ + + DFG A G D L G+ I GT +M+PE L
Sbjct: 192 VKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDY--IPGTETHMAPEVVLGRSC 249
Query: 682 SVKSDVFSFGVLMLEIL 698
K DV+S +ML +L
Sbjct: 250 DAKVDVWSSCCMMLHML 266
>pdb|1MSA|A Chain A, Mannose-Specific Agglutinin (Lectin) From Snowdrop
(Galanthus Nivalis) Bulbs Complexed With Methyl-Alpha-D-
Mannoside
pdb|1MSA|B Chain B, Mannose-Specific Agglutinin (Lectin) From Snowdrop
(Galanthus Nivalis) Bulbs Complexed With Methyl-Alpha-D-
Mannoside
pdb|1MSA|C Chain C, Mannose-Specific Agglutinin (Lectin) From Snowdrop
(Galanthus Nivalis) Bulbs Complexed With Methyl-Alpha-D-
Mannoside
pdb|1MSA|D Chain D, Mannose-Specific Agglutinin (Lectin) From Snowdrop
(Galanthus Nivalis) Bulbs Complexed With Methyl-Alpha-D-
Mannoside
pdb|1NIV|A Chain A, Mannose-Specific Agglutinin (Lectin) From Snowdrop
(Galanthus Nivalis) Bulbs In Complex With Mannose-Alpha
1, 3-Methyl-D-Mannose
pdb|1NIV|C Chain C, Mannose-Specific Agglutinin (Lectin) From Snowdrop
(Galanthus Nivalis) Bulbs In Complex With Mannose-Alpha
1, 3-Methyl-D-Mannose
pdb|1JPC|A Chain A, Mannose-Specific Agglutinin (Lectin) From Snowdrop
(Galanthus Nivalis) Bulbs In Complex With
Mannose-Alpha1,6-(Mannose-Alpha1,3)-Mannose-
Alpha1,6-(Mannose-Alpha1,3)-Mannose
Length = 109
Score = 33.5 bits (75), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 87 DTVVWVANRNSPIVDKNGVLTVSNRGNLVLLNQSNGTIWSSNVSREVKNPVAQLLDNGNL 146
D +W N + ++ L++ GNLV+ N SN IW+SN + N V L + N+
Sbjct: 37 DKPIWATNTGG--LSRSCFLSMQTDGNLVVYNPSNKPIWASNTGGQNGNYVCILQKDRNV 94
Query: 147 VI 148
VI
Sbjct: 95 VI 96
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 33.5 bits (75), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 74/197 (37%), Gaps = 25/197 (12%)
Query: 524 TENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQHRNL 583
++ + + +G G FG R E+ + + + K E++ L+H N+
Sbjct: 18 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKREIINHRSLRHPNI 77
Query: 584 VRLLGCCIEQGEKILIYEY-----MVNKSLDVFLFDPTKKHLLGWQL------------- 625
VR + ++ EY + + + F + QL
Sbjct: 78 VRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVC 137
Query: 626 -RVRIIDGIAQDQHMNP--KISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFS 682
R ++ D P KI DFG ++ L K VGT Y++PE L+ +
Sbjct: 138 HRDLKLENTLLDGSPAPRLKICDFGYSK---SSVLHSQPKSTVGTPAYIAPEVLLKKEYD 194
Query: 683 VK-SDVFSFGVLMLEIL 698
K +DV+S GV + +L
Sbjct: 195 GKVADVWSCGVTLYVML 211
>pdb|1NPL|A Chain A, Mannose-Specific Agglutinin (Lectin) From Daffodil
(Narcissus Pseudonarcissus) Bulbs In Complex With
Mannose-Alpha1,3-Mannose
pdb|3DZW|A Chain A, Structure Of Narcissus Pseudonarcissus Lectin Complex With
Mannobiose At 1.7 A Resolution, Form Ii
pdb|3DZW|B Chain B, Structure Of Narcissus Pseudonarcissus Lectin Complex With
Mannobiose At 1.7 A Resolution, Form Ii
Length = 109
Score = 33.1 bits (74), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 42/89 (47%), Gaps = 10/89 (11%)
Query: 68 FSPGKSQN--RYVGIWYQQIP------DTVVWVANRNSPIVDKNGVLTVSNRGNLVLLNQ 119
SPG+ N RYV I + D +W N +D+ L++ + GNLV+ +
Sbjct: 10 LSPGEFLNNGRYVFIMQEDCNLVLYDVDKPIWATNTGG--LDRRCHLSMQSDGNLVVYSP 67
Query: 120 SNGTIWSSNVSREVKNPVAQLLDNGNLVI 148
N IW+SN E N V L + N+VI
Sbjct: 68 RNNPIWASNTGGENGNYVCVLQKDRNVVI 96
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 33.1 bits (74), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 94/232 (40%), Gaps = 45/232 (19%)
Query: 533 LGEGGFGPVYKG-RLLNGQEVAVKRLSNQSGQGLKEFKNEMMLIAKLQ-HRNLVRLLGCC 590
LGEG V L+ QE AVK + Q G E+ ++ + Q HRN++ L+
Sbjct: 21 LGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFF 80
Query: 591 IEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRVRIID-----------GIAQD--- 636
E+ L++E M S+ + ++H + V + D GIA
Sbjct: 81 EEEDRFYLVFEKMRGGSILSHIH--KRRHFNELEASVVVQDVASALDFLHNKGIAHRDLK 138
Query: 637 ------QHMNP----KISDFGMARMFGGDELQGNTKRI--------VGTYGYMSPE---- 674
+H N KI DF + G +L G+ I G+ YM+PE
Sbjct: 139 PENILCEHPNQVSPVKICDFDLG---SGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEA 195
Query: 675 YALEG-VFSVKSDVFSFGVLMLEILSSKKN-TGVYNTDSFNLLGHAWSLCKN 724
++ E ++ + D++S GV++ +LS G +D G A C+N
Sbjct: 196 FSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQN 247
>pdb|1XD6|A Chain A, Crystal Structures Of Novel Monomeric Monocot Mannose-
Binding Lectins From Gastrodia Elata
Length = 112
Score = 33.1 bits (74), Expect = 0.70, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 90 VWVANRNSPIVDKNGVLTVSNRGNLVLLNQSNGTIWSSNVSREVKNPVAQLLDNGNLVIR 149
VW + N N +L + GNLV+ + S +W+SN +R+ N L + N+VI
Sbjct: 40 VWASGTNGKA--SNCILKMQRDGNLVIYSGSRA-MWASNTNRQDGNYYLILQRDRNVVIY 96
Query: 150 DNSGS 154
DNS +
Sbjct: 97 DNSNN 101
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 33.1 bits (74), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 91/207 (43%), Gaps = 41/207 (19%)
Query: 527 FSIQSKLGEGGFGPVYKGRLLN-GQEVAVK----RLSNQSGQGL--KEFKNEMMLIAKLQ 579
+ I +LG G F V K R + G E A K R S S +G+ +E + E+ ++ ++
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVL 73
Query: 580 HRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRV----RIIDGI-- 633
H N++ L + + +LI E + L FL +K L + +I+DG+
Sbjct: 74 HPNIITLHDVYENRTDVVLILELVSGGELFDFL---AQKESLSEEEATSFIKQILDGVNY 130
Query: 634 ---AQDQH--MNP---------------KISDFGMA-RMFGGDELQGNTKRIVGTYGYMS 672
+ H + P K+ DFG+A + G E K I GT +++
Sbjct: 131 LHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF----KNIFGTPEFVA 186
Query: 673 PEYALEGVFSVKSDVFSFGVLMLEILS 699
PE +++D++S GV+ +LS
Sbjct: 187 PEIVNYEPLGLEADMWSIGVITYILLS 213
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 32.7 bits (73), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 91/207 (43%), Gaps = 41/207 (19%)
Query: 527 FSIQSKLGEGGFGPVYKGRLLN-GQEVAVK----RLSNQSGQGL--KEFKNEMMLIAKLQ 579
+ I +LG G F V K R + G E A K R S S +G+ +E + E+ ++ ++
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 580 HRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRV----RIIDGI-- 633
H N++ L + + +LI E + L FL +K L + +I+DG+
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFL---AQKESLSEEEATSFIKQILDGVNY 130
Query: 634 ---AQDQH--MNP---------------KISDFGMAR-MFGGDELQGNTKRIVGTYGYMS 672
+ H + P K+ DFG+A + G E K I GT +++
Sbjct: 131 LHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF----KNIFGTPEFVA 186
Query: 673 PEYALEGVFSVKSDVFSFGVLMLEILS 699
PE +++D++S GV+ +LS
Sbjct: 187 PEIVNYEPLGLEADMWSIGVITYILLS 213
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 32.7 bits (73), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 81/202 (40%), Gaps = 28/202 (13%)
Query: 521 TAATENFSIQSKLGEGGFGPVYKGRLL-NGQEVAVKRLSNQSGQGLKEFK---NEMMLIA 576
TA + F LG G FG V + +G A+K L Q LK+ + NE ++
Sbjct: 37 TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 577 KLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLF------DPTKK------------ 618
+ LV+L + ++ EY+ + L +P +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 619 -HLLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYAL 677
H L R + + DQ +++DFG A+ ++G T + GT ++PE L
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEALAPEIIL 211
Query: 678 EGVFSVKSDVFSFGVLMLEILS 699
++ D ++ GVL+ E+ +
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAA 233
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 32.7 bits (73), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 91/207 (43%), Gaps = 41/207 (19%)
Query: 527 FSIQSKLGEGGFGPVYKGRLLN-GQEVAVK----RLSNQSGQGL--KEFKNEMMLIAKLQ 579
+ I +LG G F V K R + G E A K R S S +G+ +E + E+ ++ ++
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 580 HRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRV----RIIDGI-- 633
H N++ L + + +LI E + L FL +K L + +I+DG+
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFL---AQKESLSEEEATSFIKQILDGVNY 130
Query: 634 ---AQDQH--MNP---------------KISDFGMAR-MFGGDELQGNTKRIVGTYGYMS 672
+ H + P K+ DFG+A + G E K I GT +++
Sbjct: 131 LHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF----KNIFGTPEFVA 186
Query: 673 PEYALEGVFSVKSDVFSFGVLMLEILS 699
PE +++D++S GV+ +LS
Sbjct: 187 PEIVNYEPLGLEADMWSIGVITYILLS 213
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 32.7 bits (73), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 91/207 (43%), Gaps = 41/207 (19%)
Query: 527 FSIQSKLGEGGFGPVYKGRLLN-GQEVAVK----RLSNQSGQGL--KEFKNEMMLIAKLQ 579
+ I +LG G F V K R + G E A K R S S +G+ +E + E+ ++ ++
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 580 HRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRV----RIIDGI-- 633
H N++ L + + +LI E + L FL +K L + +I+DG+
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFL---AQKESLSEEEATSFIKQILDGVNY 130
Query: 634 ---AQDQH--MNP---------------KISDFGMAR-MFGGDELQGNTKRIVGTYGYMS 672
+ H + P K+ DFG+A + G E K I GT +++
Sbjct: 131 LHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF----KNIFGTPEFVA 186
Query: 673 PEYALEGVFSVKSDVFSFGVLMLEILS 699
PE +++D++S GV+ +LS
Sbjct: 187 PEIVNYEPLGLEADMWSIGVITYILLS 213
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 32.7 bits (73), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 91/207 (43%), Gaps = 41/207 (19%)
Query: 527 FSIQSKLGEGGFGPVYKGRLLN-GQEVAVK----RLSNQSGQGL--KEFKNEMMLIAKLQ 579
+ I +LG G F V K R + G E A K R S S +G+ +E + E+ ++ ++
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 580 HRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRV----RIIDGI-- 633
H N++ L + + +LI E + L FL +K L + +I+DG+
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFL---AQKESLSEEEATSFIKQILDGVNY 130
Query: 634 ---AQDQH--MNP---------------KISDFGMAR-MFGGDELQGNTKRIVGTYGYMS 672
+ H + P K+ DFG+A + G E K I GT +++
Sbjct: 131 LHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF----KNIFGTPEFVA 186
Query: 673 PEYALEGVFSVKSDVFSFGVLMLEILS 699
PE +++D++S GV+ +LS
Sbjct: 187 PEIVNYEPLGLEADMWSIGVITYILLS 213
>pdb|4H3O|A Chain A, Crystal Structure Of A New Form Of Lectin From Allium
Sativum At 2.17 A Resolution
pdb|4H3O|B Chain B, Crystal Structure Of A New Form Of Lectin From Allium
Sativum At 2.17 A Resolution
Length = 105
Score = 32.3 bits (72), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 88 TVVWVANRNSPIVDKNGVLTV-SNRGNLVLLNQSNGTIWSSNVSREVKNPVAQLLDNGNL 146
T W +N + I K+G V + GN V+ + S ++W+S+ +R N + L D+GN+
Sbjct: 38 TSTWASN--TEIGGKSGCSAVLQSDGNFVVYDSSGRSLWASHSTRGSGNYILILQDDGNV 95
Query: 147 VI 148
+I
Sbjct: 96 II 97
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 32.3 bits (72), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 91/208 (43%), Gaps = 43/208 (20%)
Query: 527 FSIQSKLGEGGFGPVYKGRLLN-GQEVAVK----RLSNQSGQGL--KEFKNEMMLIAKLQ 579
+ I +LG G F V K R + G E A K R S S +G+ +E + E+ ++ ++
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 580 HRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKKHLLGWQLRV----RIIDGI-- 633
H N++ L + + +LI E + L FL +K L + +I+DG+
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFL---AQKESLSEEEATSFIKQILDGVNY 130
Query: 634 ---AQDQH--MNP---------------KISDFGMARMFGGDELQGNT--KRIVGTYGYM 671
+ H + P K+ DFG+A E++ K I GT ++
Sbjct: 131 LHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH-----EIEDGVEFKNIFGTPEFV 185
Query: 672 SPEYALEGVFSVKSDVFSFGVLMLEILS 699
+PE +++D++S GV+ +LS
Sbjct: 186 APEIVNYEPLGLEADMWSIGVITYILLS 213
>pdb|2QN5|B Chain B, Crystal Structure And Functional Study Of The Bowman-Birk
Inhibitor From Rice Bran In Complex With Bovine Trypsin
Length = 133
Score = 32.3 bits (72), Expect = 1.0, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 10/62 (16%)
Query: 300 PDPFCH---YGDCGPNSICSVDQTSHCECLEGFKFKSQQNQTCVRSHSSD-----CKSGD 351
P PFC +GDC + C+ C C++ K + + C R SS+ CK D
Sbjct: 63 PGPFCTPRPWGDCCDKAFCNKMNPPTCRCMDEVKECADACKDCQRVESSEPPRYVCK--D 120
Query: 352 RF 353
RF
Sbjct: 121 RF 122
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Query: 512 LPLFSFASVTAATENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKN- 570
LPL ++ +Q +G+G FG V++G+ G+EVAVK S++ + F+
Sbjct: 19 LPLLVQRTIA---RTIVLQESIGKGRFGEVWRGK-WRGEEVAVKIFSSREERSW--FREA 72
Query: 571 EMMLIAKLQHRNLVRLLGC 589
E+ L+H N++ +
Sbjct: 73 EIYQTVMLRHENILGFIAA 91
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Query: 512 LPLFSFASVTAATENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKN- 570
LPL ++ +Q +G+G FG V++G+ G+EVAVK S++ + F+
Sbjct: 32 LPLLVQRTIA---RTIVLQESIGKGRFGEVWRGK-WRGEEVAVKIFSSREERSW--FREA 85
Query: 571 EMMLIAKLQHRNLVRLLGC 589
E+ L+H N++ +
Sbjct: 86 EIYQTVMLRHENILGFIAA 104
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 529 IQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKN-EMMLIAKLQHRNLVRLL 587
+Q +G+G FG V++G+ G+EVAVK S++ + F+ E+ L+H N++ +
Sbjct: 8 LQESIGKGRFGEVWRGK-WRGEEVAVKIFSSREERSW--FREAEIYQTVMLRHENILGFI 64
Query: 588 GC 589
Sbjct: 65 AA 66
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 529 IQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKN-EMMLIAKLQHRNLVRLL 587
+Q +G+G FG V++G+ G+EVAVK S++ + F+ E+ L+H N++ +
Sbjct: 7 LQESIGKGRFGEVWRGK-WRGEEVAVKIFSSREERSW--FREAEIYQTVMLRHENILGFI 63
Query: 588 GC 589
Sbjct: 64 AA 65
>pdb|3CFB|H Chain H, High-Resolution Structure Of Blue Fluorescent Antibody
Ep2-19g2 In Complex With Stilbene Hapten At 100k
pdb|3CFB|B Chain B, High-Resolution Structure Of Blue Fluorescent Antibody
Ep2-19g2 In Complex With Stilbene Hapten At 100k
Length = 213
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 49 LIRDGETLVSPSQRFELGFFSPGKSQNRYVGIWYQQIPDTVV-WVANRNS 97
L+ G LV P +L + G + +RY+ W +QIP+ + WVA+ +S
Sbjct: 4 LVESGGGLVKPGGSLKLSCTASGITFSRYIMSWVRQIPEKRLEWVASISS 53
>pdb|3CFC|H Chain H, High-Resolution Structure Of Blue Fluorescent Antibody
Ep2-19g2
Length = 213
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 49 LIRDGETLVSPSQRFELGFFSPGKSQNRYVGIWYQQIPDTVV-WVANRNS 97
L+ G LV P +L + G + +RY+ W +QIP+ + WVA+ +S
Sbjct: 4 LVESGGGLVKPGGSLKLSCTASGITFSRYIMSWVRQIPEKRLEWVASISS 53
>pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1EH4|B Chain B, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Mgatp
Length = 298
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Query: 526 NFSIQSKLGEGGFGPVYKG-RLLNGQEVAVK 555
++ + ++GEG FG +++G LLN Q+VA+K
Sbjct: 11 HYKVGRRIGEGSFGVIFEGTNLLNNQQVAIK 41
>pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7
Length = 297
Score = 32.0 bits (71), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Query: 526 NFSIQSKLGEGGFGPVYKG-RLLNGQEVAVK 555
++ + ++GEG FG +++G LLN Q+VA+K
Sbjct: 10 HYKVGRRIGEGSFGVIFEGTNLLNNQQVAIK 40
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 32.0 bits (71), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 529 IQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKN-EMMLIAKLQHRNLVRLL 587
+Q +G+G FG V++G+ G+EVAVK S++ + F+ E+ L+H N++ +
Sbjct: 10 LQESIGKGRFGEVWRGK-WRGEEVAVKIFSSREERSW--FREAEIYQTVMLRHENILGFI 66
Query: 588 GC 589
Sbjct: 67 AA 68
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 529 IQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKEFKN-EMMLIAKLQHRNLVRLL 587
+Q +G+G FG V++G+ G+EVAVK S++ + F+ E+ L+H N++ +
Sbjct: 13 LQESIGKGRFGEVWRGK-WRGEEVAVKIFSSREERSW--FREAEIYQTVMLRHENILGFI 69
Query: 588 GC 589
Sbjct: 70 AA 71
>pdb|1UB6|H Chain H, Crystal Structure Of Antibody 19g2 With Sera Ligand
pdb|1UB6|A Chain A, Crystal Structure Of Antibody 19g2 With Sera Ligand
Length = 208
Score = 31.6 bits (70), Expect = 1.7, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 49 LIRDGETLVSPSQRFELGFFSPGKSQNRYVGIWYQQIPDT-VVWVANRNS 97
L+ G LV P +L + G + +RY+ W +QIP+ + WVA+ +S
Sbjct: 3 LLESGGGLVKPGGSLKLSCTASGITFSRYIMSWVRQIPEKRLEWVASISS 52
>pdb|1FL3|H Chain H, Crystal Structure Of The Blue Fluorescent Antibody
(19g2) In Complex With Stilbene Hapten At 277k
pdb|1FL3|A Chain A, Crystal Structure Of The Blue Fluorescent Antibody
(19g2) In Complex With Stilbene Hapten At 277k
Length = 208
Score = 31.6 bits (70), Expect = 1.9, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 49 LIRDGETLVSPSQRFELGFFSPGKSQNRYVGIWYQQIPDT-VVWVANRNS 97
L+ G LV P +L + G + +RY+ W +QIP+ + WVA+ +S
Sbjct: 3 LLESGGGLVKPGGSLKLSCTASGITFSRYIMSWVRQIPEKRLEWVASISS 52
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 4/86 (4%)
Query: 630 IDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFS 689
++ + D+ + KI+DFG+ + G + K GT Y++PE + + D +
Sbjct: 277 LENLMLDKDGHIKITDFGLCK--EGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWG 334
Query: 690 FGVLMLEILSSKKNTGVYNTDSFNLL 715
GV+M E++ + YN D L
Sbjct: 335 LGVVMYEMMCGR--LPFYNQDHEKLF 358
>pdb|1UB5|H Chain H, Crystal Structure Of Antibody 19g2 With Hapten At 100k
pdb|1UB5|A Chain A, Crystal Structure Of Antibody 19g2 With Hapten At 100k
Length = 209
Score = 31.6 bits (70), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 49 LIRDGETLVSPSQRFELGFFSPGKSQNRYVGIWYQQIPDTVV-WVANRNS 97
L+ G LV P +L + G + +RY+ W +QIP+ + WVA+ +S
Sbjct: 4 LLESGGGLVKPGGSLKLSCTASGITFSRYIMSWVRQIPEKRLEWVASISS 53
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 31.6 bits (70), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 4/86 (4%)
Query: 630 IDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFS 689
++ + D+ + KI+DFG+ + G + K GT Y++PE + + D +
Sbjct: 280 LENLMLDKDGHIKITDFGLCK--EGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWG 337
Query: 690 FGVLMLEILSSKKNTGVYNTDSFNLL 715
GV+M E++ + YN D L
Sbjct: 338 LGVVMYEMMCGR--LPFYNQDHEKLF 361
>pdb|1BWU|Q Chain Q, Mannose-Specific Agglutinin (Lectin) From Garlic (Allium
Sativum) Bulbs Complexed With Alpha-D-Mannose
Length = 109
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 88 TVVWVANRNSPIVDKNGVLTV-SNRGNLVLLNQSNGTIWSSNVSREVKNPVAQLLDNGNL 146
T VW +N + P K G V + GN V+ + ++W+S+ R N V L ++GN+
Sbjct: 38 TAVWSSNTDIP--GKKGCKAVLQSDGNFVVYDAEGASLWASHSVRGNGNYVLVLQEDGNV 95
Query: 147 VI 148
VI
Sbjct: 96 VI 97
>pdb|1BWU|D Chain D, Mannose-Specific Agglutinin (Lectin) From Garlic (Allium
Sativum) Bulbs Complexed With Alpha-D-Mannose
Length = 109
Score = 31.2 bits (69), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 88 TVVWVANRNSPIVDKNGVLTV-SNRGNLVLLNQSNGTIWSSNVSREVKNPVAQLLDNGNL 146
T VW +N + P K G V + GN V+ + ++W+S+ R N V L ++GN+
Sbjct: 38 TAVWSSNTDIP--GKKGCKAVLQSDGNFVVYDAEGASLWASHSVRGNGNYVLVLQEDGNV 95
Query: 147 VI 148
VI
Sbjct: 96 VI 97
>pdb|1KJ1|A Chain A, Mannose-Specific Agglutinin (Lectin) From Garlic (Allium
Sativum) Bulbs Complexed With Alpha-D-Mannose
pdb|1KJ1|P Chain P, Mannose-Specific Agglutinin (Lectin) From Garlic (Allium
Sativum) Bulbs Complexed With Alpha-D-Mannose
Length = 109
Score = 31.2 bits (69), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Query: 88 TVVWVANRNSPIVDKNGVLTV-SNRGNLVLLNQSNGTIWSSNVSREVKNPVAQLLDNGNL 146
T VW +N + I+ K G V + GN V+ + ++W+S+ R N V L ++GN+
Sbjct: 38 TSVWASN--TGILGKKGCKAVLQSDGNFVVYDAEGRSLWASHSVRGNGNYVLVLQEDGNV 95
Query: 147 VI 148
VI
Sbjct: 96 VI 97
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 31.2 bits (69), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 9/76 (11%)
Query: 628 RIIDG----IAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSV 683
R+ DG I + + K+ DFG A F D G+ I+ T Y +PE L + V
Sbjct: 184 RVTDGKKIQIYRTKSTGIKLIDFGCA-TFKSD-YHGS---IINTRQYRAPEVILNLGWDV 238
Query: 684 KSDVFSFGVLMLEILS 699
SD++SFG ++ E+ +
Sbjct: 239 SSDMWSFGCVLAELYT 254
>pdb|3LS4|H Chain H, Crystal Structure Of Anti-Tetrahydrocannabinol Fab
Fragment With Thc
pdb|3LS5|H Chain H, Anti-Tetrahydrocannabinol Fab Fragment, Free Form
Length = 219
Score = 31.2 bits (69), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 49 LIRDGETLVSPSQRFELGFFSPGKSQNRYVGIWYQQIPDTVV-WVAN 94
L+ G LV P +L + G + N YV +W +Q P+ + WVA+
Sbjct: 4 LVESGGGLVKPGGSLKLSCAASGFTFNNYVMVWLRQTPEKRLEWVAS 50
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 531 SKLGEGGFGPVYKGRLLNGQEVAVK--RLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLG 588
+KL E G ++KGR G ++ VK ++ + S + ++F E + H N++ +LG
Sbjct: 16 TKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLG 74
Query: 589 CC 590
C
Sbjct: 75 AC 76
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 82/204 (40%), Gaps = 32/204 (15%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKE-----FKNEMMLIAKLQ 579
E+F I +G G FG V ++ N + + ++ N+ + LK F+ E ++
Sbjct: 74 EDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNK-WEMLKRAETACFREERDVLVNGD 132
Query: 580 HRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKK--------------------H 619
+ + L ++ L+ +Y V L L K H
Sbjct: 133 CQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIH 192
Query: 620 LLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEY--AL 677
L + R D + D + + +++DFG + D+ + VGT Y+SPE A+
Sbjct: 193 QLHYVHRDIKPDNVLLDVNGHIRLADFGSC-LKMNDDGTVQSSVAVGTPDYISPEILQAM 251
Query: 678 E---GVFSVKSDVFSFGVLMLEIL 698
E G + + D +S GV M E+L
Sbjct: 252 EDGMGKYGPECDWWSLGVCMYEML 275
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 30.8 bits (68), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 4/86 (4%)
Query: 630 IDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFS 689
++ + D+ + KI+DFG+ + G + K GT Y++PE + + D +
Sbjct: 137 LENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWG 194
Query: 690 FGVLMLEILSSKKNTGVYNTDSFNLL 715
GV+M E++ + YN D L
Sbjct: 195 LGVVMYEMMCGR--LPFYNQDHEKLF 218
>pdb|2YYE|A Chain A, Crystal Structure Of Selenophosphate Synthetase From
Aquifex Aeolicus Complexed With Ampcpp
pdb|2YYE|B Chain B, Crystal Structure Of Selenophosphate Synthetase From
Aquifex Aeolicus Complexed With Ampcpp
pdb|2ZOD|A Chain A, Crystal Structure Of Selenophosphate Synthetase From
Aquifex Aeolicus
pdb|2ZOD|B Chain B, Crystal Structure Of Selenophosphate Synthetase From
Aquifex Aeolicus
Length = 345
Score = 30.8 bits (68), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 17/28 (60%)
Query: 697 ILSSKKNTGVYNTDSFNLLGHAWSLCKN 724
++ S T + F LLGHAW++CKN
Sbjct: 217 LMLSLDATACTDVTGFGLLGHAWNICKN 244
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 30.8 bits (68), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 82/204 (40%), Gaps = 32/204 (15%)
Query: 525 ENFSIQSKLGEGGFGPVYKGRLLNGQEVAVKRLSNQSGQGLKE-----FKNEMMLIAKLQ 579
E+F I +G G FG V ++ N + + ++ N+ + LK F+ E ++
Sbjct: 90 EDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNK-WEMLKRAETACFREERDVLVNGD 148
Query: 580 HRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLFDPTKK--------------------H 619
+ + L ++ L+ +Y V L L K H
Sbjct: 149 CQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIH 208
Query: 620 LLGWQLRVRIIDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEY--AL 677
L + R D + D + + +++DFG + D+ + VGT Y+SPE A+
Sbjct: 209 QLHYVHRDIKPDNVLLDVNGHIRLADFGSC-LKMNDDGTVQSSVAVGTPDYISPEILQAM 267
Query: 678 E---GVFSVKSDVFSFGVLMLEIL 698
E G + + D +S GV M E+L
Sbjct: 268 EDGMGKYGPECDWWSLGVCMYEML 291
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 30.8 bits (68), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 4/86 (4%)
Query: 630 IDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFS 689
++ + D+ + KI+DFG+ + G + K GT Y++PE + + D +
Sbjct: 139 LENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWG 196
Query: 690 FGVLMLEILSSKKNTGVYNTDSFNLL 715
GV+M E++ + YN D L
Sbjct: 197 LGVVMYEMMCGR--LPFYNQDHEKLF 220
>pdb|1KJ1|D Chain D, Mannose-Specific Agglutinin (Lectin) From Garlic (Allium
Sativum) Bulbs Complexed With Alpha-D-Mannose
pdb|1KJ1|Q Chain Q, Mannose-Specific Agglutinin (Lectin) From Garlic (Allium
Sativum) Bulbs Complexed With Alpha-D-Mannose
Length = 109
Score = 30.8 bits (68), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query: 88 TVVWVANRNSPIVDKNGVLTV-SNRGNLVLLNQSNGTIWSSNVSREVKNPVAQLLDNGNL 146
T VW N + P K G V + GN V+ + ++W+S+ R N V L ++GN+
Sbjct: 38 TAVWTTNTDIP--GKKGCKAVLQSDGNFVVYDAEGRSLWASHSVRGNGNYVLVLQEDGNV 95
Query: 147 VI 148
VI
Sbjct: 96 VI 97
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 30.8 bits (68), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 4/86 (4%)
Query: 630 IDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFS 689
++ + D+ + KI+DFG+ + G + K GT Y++PE + + D +
Sbjct: 138 LENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWG 195
Query: 690 FGVLMLEILSSKKNTGVYNTDSFNLL 715
GV+M E++ + YN D L
Sbjct: 196 LGVVMYEMMCGR--LPFYNQDHEKLF 219
>pdb|3A0C|A Chain A, Crystal Structure Of An Anti-Hiv Mannose-Binding Lectin
From Polygonatum Cyrtonema Hua
pdb|3A0C|B Chain B, Crystal Structure Of An Anti-Hiv Mannose-Binding Lectin
From Polygonatum Cyrtonema Hua
pdb|3A0C|C Chain C, Crystal Structure Of An Anti-Hiv Mannose-Binding Lectin
From Polygonatum Cyrtonema Hua
pdb|3A0C|D Chain D, Crystal Structure Of An Anti-Hiv Mannose-Binding Lectin
From Polygonatum Cyrtonema Hua
pdb|3A0D|A Chain A, Crystal Structure Of Polygonatum Cyrtonema Lectin (Pcl)
Complexed With Monomannoside
pdb|3A0E|A Chain A, Crystal Structure Of Polygonatum Cyrtonema Lectin (Pcl)
Complexed With Dimannoside
Length = 110
Score = 30.8 bits (68), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 26/43 (60%)
Query: 106 LTVSNRGNLVLLNQSNGTIWSSNVSREVKNPVAQLLDNGNLVI 148
LT+ N GNLV+ +QSN IW + + + + V L + N+VI
Sbjct: 55 LTLHNNGNLVIYDQSNRVIWQTKTNGKEDHYVLVLQQDRNVVI 97
>pdb|2ZAU|A Chain A, Crystal Structure Of An N-Terminally Truncated
Selenophosphate Synthetase From Aquifex Aeolicus
pdb|2ZAU|B Chain B, Crystal Structure Of An N-Terminally Truncated
Selenophosphate Synthetase From Aquifex Aeolicus
pdb|2ZAU|C Chain C, Crystal Structure Of An N-Terminally Truncated
Selenophosphate Synthetase From Aquifex Aeolicus
Length = 311
Score = 30.8 bits (68), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 17/28 (60%)
Query: 697 ILSSKKNTGVYNTDSFNLLGHAWSLCKN 724
++ S T + F LLGHAW++CKN
Sbjct: 183 LMLSLDATACTDVTGFGLLGHAWNICKN 210
>pdb|1BWU|A Chain A, Mannose-Specific Agglutinin (Lectin) From Garlic (Allium
Sativum) Bulbs Complexed With Alpha-D-Mannose
Length = 106
Score = 30.4 bits (67), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Query: 88 TVVWVANRNSPIVDKNGVLTV-SNRGNLVLLNQSNGTIWSSNVSREVKNPVAQLLDNGNL 146
T VW +N + I+ K G V + GN V+ + ++W+S+ R N V L ++GN+
Sbjct: 38 TSVWASN--TGILGKKGCRAVLQSDGNFVVYDAEGRSLWASHSVRGNGNYVLVLQEDGNV 95
Query: 147 VI 148
VI
Sbjct: 96 VI 97
>pdb|3K1K|C Chain C, Green Fluorescent Protein Bound To Minimizer Nanobody
pdb|3K1K|D Chain D, Green Fluorescent Protein Bound To Minimizer Nanobody
Length = 123
Score = 30.4 bits (67), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Query: 44 LTPTTLIRDGETLVSPSQRFELGFFSPGKSQNRYVGIWYQQIP-DTVVWVANRNS 97
+ L+ G LV P L + G NRY WY+Q P WVA +S
Sbjct: 1 MAQVQLVESGGALVQPGGSLRLSCAASGFPVNRYSMRWYRQAPGKEREWVAGMSS 55
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 30.4 bits (67), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 4/86 (4%)
Query: 630 IDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFS 689
++ + D+ + KI+DFG+ + D K GT Y++PE + + D +
Sbjct: 133 LENLMLDKDGHIKITDFGLCKEGISD--GATMKXFCGTPEYLAPEVLEDNDYGRAVDWWG 190
Query: 690 FGVLMLEILSSKKNTGVYNTDSFNLL 715
GV+M E++ + YN D L
Sbjct: 191 LGVVMYEMMCGR--LPFYNQDHERLF 214
>pdb|1TX6|I Chain I, Trypsin:bbi Complex
pdb|1TX6|J Chain J, Trypsin:bbi Complex
pdb|2FJ8|A Chain A, High Resolution Structure Of Barley Bowman-Birk Inhibitor
Length = 125
Score = 30.4 bits (67), Expect = 4.6, Method: Composition-based stats.
Identities = 13/45 (28%), Positives = 21/45 (46%)
Query: 300 PDPFCHYGDCGPNSICSVDQTSHCECLEGFKFKSQQNQTCVRSHS 344
P P C +C +IC+ C C++ K + +TC+ S S
Sbjct: 59 PGPICRPWECCDKAICTRSNPPTCRCVDEVKKCAPTCKTCLPSRS 103
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 30.4 bits (67), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 4/86 (4%)
Query: 630 IDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFS 689
++ + D+ + KI+DFG+ + D K GT Y++PE + + D +
Sbjct: 138 LENLMLDKDGHIKITDFGLCKEGISD--GATMKXFCGTPEYLAPEVLEDNDYGRAVDWWG 195
Query: 690 FGVLMLEILSSKKNTGVYNTDSFNLL 715
GV+M E++ + YN D L
Sbjct: 196 LGVVMYEMMCGR--LPFYNQDHERLF 219
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 30.0 bits (66), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 46/99 (46%), Gaps = 10/99 (10%)
Query: 524 TENFSIQSKLGEGGFGPVYKG-RLLNGQEVAVKRLSNQ--------SGQGLKEFKNEMML 574
++ +S S LG G FG V+ +EV VK + + L + E+ +
Sbjct: 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAI 82
Query: 575 IAKLQHRNLVRLLGCCIEQGEKILIYEYMVNKSLDVFLF 613
+++++H N++++L QG L+ E LD+F F
Sbjct: 83 LSRVEHANIIKVLDIFENQGFFQLVMEKH-GSGLDLFAF 120
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 30.0 bits (66), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 4/86 (4%)
Query: 630 IDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFS 689
++ + D+ + KI+DFG+ + D K GT Y++PE + + D +
Sbjct: 133 LENLMLDKDGHIKITDFGLCKEGISD--GATMKXFCGTPEYLAPEVLEDNDYGRAVDWWG 190
Query: 690 FGVLMLEILSSKKNTGVYNTDSFNLL 715
GV+M E++ + YN D L
Sbjct: 191 LGVVMYEMMCGR--LPFYNQDHERLF 214
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 30.0 bits (66), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 4/86 (4%)
Query: 630 IDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFS 689
++ + D+ + KI+DFG+ + D K GT Y++PE + + D +
Sbjct: 133 LENLMLDKDGHIKITDFGLCKEGISD--GATMKXFCGTPEYLAPEVLEDNDYGRAVDWWG 190
Query: 690 FGVLMLEILSSKKNTGVYNTDSFNLL 715
GV+M E++ + YN D L
Sbjct: 191 LGVVMYEMMCGR--LPFYNQDHERLF 214
>pdb|1C2A|A Chain A, Crystal Structure Of Barley Bbi
Length = 120
Score = 30.0 bits (66), Expect = 5.0, Method: Composition-based stats.
Identities = 13/45 (28%), Positives = 21/45 (46%)
Query: 300 PDPFCHYGDCGPNSICSVDQTSHCECLEGFKFKSQQNQTCVRSHS 344
P P C +C +IC+ C C++ K + +TC+ S S
Sbjct: 56 PGPICRPWECCDKAICTRSNPPTCRCVDEVKKCAPTCKTCLPSRS 100
>pdb|3OGO|E Chain E, Structure Of The Gfp:gfp-Nanobody Complex At 2.8 A
Resolution In Spacegroup P21212
pdb|3OGO|F Chain F, Structure Of The Gfp:gfp-Nanobody Complex At 2.8 A
Resolution In Spacegroup P21212
pdb|3OGO|G Chain G, Structure Of The Gfp:gfp-Nanobody Complex At 2.8 A
Resolution In Spacegroup P21212
pdb|3OGO|H Chain H, Structure Of The Gfp:gfp-Nanobody Complex At 2.8 A
Resolution In Spacegroup P21212
Length = 123
Score = 30.0 bits (66), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Query: 49 LIRDGETLVSPSQRFELGFFSPGKSQNRYVGIWYQQIP-DTVVWVANRNS 97
L+ G LV P L + G NRY WY+Q P WVA +S
Sbjct: 5 LVESGGALVQPGGSLRLSCAASGFPVNRYSMRWYRQAPGKEREWVAGMSS 54
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 30.0 bits (66), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 4/86 (4%)
Query: 630 IDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFS 689
++ + D+ + KI+DFG+ + D K GT Y++PE + + D +
Sbjct: 133 LENLMLDKDGHIKITDFGLCKEGISD--GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWG 190
Query: 690 FGVLMLEILSSKKNTGVYNTDSFNLL 715
GV+M E++ + YN D L
Sbjct: 191 LGVVMYEMMCGR--LPFYNQDHERLF 214
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 30.0 bits (66), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 4/86 (4%)
Query: 630 IDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFS 689
++ + D+ + KI+DFG+ + D K GT Y++PE + + D +
Sbjct: 136 LENLMLDKDGHIKITDFGLCKEGISD--GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWG 193
Query: 690 FGVLMLEILSSKKNTGVYNTDSFNLL 715
GV+M E++ + YN D L
Sbjct: 194 LGVVMYEMMCGR--LPFYNQDHERLF 217
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 30.0 bits (66), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 4/86 (4%)
Query: 630 IDGIAQDQHMNPKISDFGMARMFGGDELQGNTKRIVGTYGYMSPEYALEGVFSVKSDVFS 689
++ + D+ + KI+DFG+ + D K GT Y++PE + + D +
Sbjct: 133 LENLMLDKDGHIKITDFGLCKEGISD--GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWG 190
Query: 690 FGVLMLEILSSKKNTGVYNTDSFNLL 715
GV+M E++ + YN D L
Sbjct: 191 LGVVMYEMMCGR--LPFYNQDHERLF 214
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 29.6 bits (65), Expect = 6.3, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 531 SKLGEGGFGPVYKGRLLNGQEVAVK--RLSNQSGQGLKEFKNEMMLIAKLQHRNLVRLLG 588
+KL E G ++KGR G ++ VK ++ + S + ++F E + H N++ +LG
Sbjct: 16 TKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLG 74
Query: 589 CC 590
C
Sbjct: 75 AC 76
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 29.6 bits (65), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 9/87 (10%)
Query: 526 NFSIQSKLGEGGFGPVYKG-RLLNGQEVAVKRLSNQSGQGLKEFKN------EMMLIAKL 578
+ + LG GGFG VY G R+ + VA+K + E N E++L+ K+
Sbjct: 9 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 68
Query: 579 Q--HRNLVRLLGCCIEQGEKILIYEYM 603
++RLL +LI E M
Sbjct: 69 SSGFSGVIRLLDWFERPDSFVLILERM 95
>pdb|3GHE|H Chain H, Crystal Structure Of Anti-Hiv-1 Fab 537-10d In Complex
With V3 Peptide Mn
Length = 233
Score = 29.6 bits (65), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Query: 49 LIRDGETLVSPSQRFELGFFSPGKSQNRYVGIWYQQIPDT-VVWVANRNSPIVDKNGVLT 107
L++ G LV P L + G + N Y W +Q P + WVAN DK V +
Sbjct: 4 LVQSGGGLVQPGGSLRLSCVASGFTFNNYWMSWVRQAPGKGLEWVANIKQDGNDKYYVDS 63
Query: 108 VSNRGNLVLLNQSN 121
V R + N N
Sbjct: 64 VKGRFTISRDNAKN 77
>pdb|1BWU|P Chain P, Mannose-Specific Agglutinin (Lectin) From Garlic (Allium
Sativum) Bulbs Complexed With Alpha-D-Mannose
Length = 106
Score = 29.6 bits (65), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 88 TVVWVANRNSPIVDKNGVLTV-SNRGNLVLLNQSNGTIWSSNVSREVKNPVAQLLDNGNL 146
T VW +N + I+ K G V GN V+ + ++W+S+ R N V L ++GN+
Sbjct: 38 TSVWASN--TGILGKKGCKAVLQADGNFVVYDAEGRSLWASHSVRGNGNYVLVLQEDGNV 95
Query: 147 VI 148
VI
Sbjct: 96 VI 97
>pdb|3GNZ|P Chain P, Toxin Fold For Microbial Attack And Plant Defense
Length = 213
Score = 29.3 bits (64), Expect = 8.3, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 19/45 (42%)
Query: 199 PSPGNFTHRLDIHVLPQVCVYNGSAKYTCTGPWNGVAFGSAPSNT 243
P P + T L + PQ+ V NG Y P + G PS +
Sbjct: 14 PEPADATQALAVRFKPQLDVVNGCQPYPAVDPQGNTSGGLKPSGS 58
>pdb|3GNU|P Chain P, Toxin Fold As Basis For Microbial Attack And Plant Defense
Length = 213
Score = 29.3 bits (64), Expect = 8.3, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 19/45 (42%)
Query: 199 PSPGNFTHRLDIHVLPQVCVYNGSAKYTCTGPWNGVAFGSAPSNT 243
P P + T L + PQ+ V NG Y P + G PS +
Sbjct: 14 PEPADATQALAVRFKPQLDVVNGCQPYPAVDPQGNTSGGLKPSGS 58
>pdb|3THM|H Chain H, Crystal Structure Of Fas Receptor Extracellular Domain In
Complex With Fab Ep6b_b01
Length = 245
Score = 29.3 bits (64), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 50/133 (37%), Gaps = 31/133 (23%)
Query: 49 LIRDGETLVSPSQRFELGFFSPGKS--QNRYVGIWYQQIP-------DTVVWVANRNS-- 97
L G LV PS+ L G S N Y G+W +Q P ++ + N NS
Sbjct: 4 LQESGPGLVKPSETLSLTCTVSGASISANSYYGVWVRQSPGKGLEWVGSIAYRGNSNSGS 63
Query: 98 ----PIVDKNGVLTVSNRGNLVLLNQSNGTIWSSNVSREVKNPVAQLLDNGNLVIRDNSG 153
P + ++V + N V L ++ T + + + QLLD+G
Sbjct: 64 TYYNPSLKSRATVSVDSSKNQVSLRLTSVTAADTALYYCARR---QLLDDGT-------- 112
Query: 154 SNSTESYLWQSFD 166
Y W +FD
Sbjct: 113 -----GYQWAAFD 120
>pdb|2BS7|1 Chain 1, Crystal Structure Of F17b-G In Complex With Chitobiose
Length = 176
Score = 29.3 bits (64), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 11/66 (16%)
Query: 200 SPGNF--THRLDIHVLPQVCVYNGSAKY----TCTG-----PWNGVAFGSAPSNTTFIFQ 248
S GN+ T L +HV P + N SA+Y T G P+NG + GS + F
Sbjct: 110 SVGNYLSTQGLSVHVRPVILKRNSSAQYSVQKTSIGSIRMRPYNGSSAGSVQTTVNFSLN 169
Query: 249 PIVVQN 254
P + +
Sbjct: 170 PFTLND 175
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.135 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,237,374
Number of Sequences: 62578
Number of extensions: 1025159
Number of successful extensions: 4480
Number of sequences better than 100.0: 856
Number of HSP's better than 100.0 without gapping: 410
Number of HSP's successfully gapped in prelim test: 446
Number of HSP's that attempted gapping in prelim test: 2898
Number of HSP's gapped (non-prelim): 1189
length of query: 823
length of database: 14,973,337
effective HSP length: 107
effective length of query: 716
effective length of database: 8,277,491
effective search space: 5926683556
effective search space used: 5926683556
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)