BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>003403
MAAITRADSTTKALWRRRLGSALRTALACSIVGFTTLYSPEHLRHMPAFPAFSYVTTILI
LSDATLGDTLRGCWHALYATIQIMIPSILCLWLVGPDRFTADVAAVVVTLMSFVVALPES
TALMAKRIAFGQIVIVCVGTVVHGAKTGIVMHPIHVASSTALGALASVVAMLLPYPRLAY
HEVKKSSKLYAENASEMLNHFVKAFCAQDNTAALDSISEAKSLFKAGAKQLLSIKDKQEG
MLWERPQIRFLKPNYKDPREKLQELEIPIRGMELALTSCPSFPVGMIDEDLRDVLQSLKA
EIGLKLEQAKCYASFDATTAPETQKNCKDESLWSLKAISSTEDVPASFFFYCIKLLQDGL
PVAPNAEFVVNETRETHTEGSSESQNQNKFKCKLKWISSSLFLLPSLESLVFALKCSLSL
GLAVILGLMYNKENGYWSGLTIAISFATNRQATFKVANARAQGTAMGSVYGVICSFLLQK
SVNFRFLPLLPWIIFSSFLRHSRMYEEAGAISAVIGALLILGRKNYGTPSEFAIARITEA
SLGLICFIIVEILFQPARAATLAKAQLAQSLQALQDGIKDIVLFADQKGKATPTALRDKQ
KRLKSHINELDKFIAEAEMEPNFWFLPFHGSCYENILASLSRMADLLLFVAYKTEFLSQL
SERFGVSWKQIQEPINDDLELFKEKVGHSLKCFEEVILIKSLAVLAPERQNRNISHDVES
GRLPNEDVPRTLSPDEEEIEEILSSFLQHSKEVANSINGYDGEEKHLSQTVLVLNGLGFC
ISSLMKETTKIEKEIKELIKWENPTRNINLYEISCKLNATYPK

High Scoring Gene Products

Symbol, full name Information P value
AT2G28780 protein from Arabidopsis thaliana 1.7e-84

The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  003403
        (823 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2074889 - symbol:AT3G09450 species:3702 "Arabi...   849  1.0e-156  2
TAIR|locus:2053200 - symbol:AT2G28780 species:3702 "Arabi...   846  1.7e-84   1


>TAIR|locus:2074889 [details] [associations]
            symbol:AT3G09450 species:3702 "Arabidopsis thaliana"
            [GO:0005886 "plasma membrane" evidence=IEA] [GO:0006810 "transport"
            evidence=IEA] InterPro:IPR006726 Pfam:PF04632 GO:GO:0005886
            EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006810 EMBL:AC016661
            EMBL:AC011436 HOGENOM:HOG000239132 IPI:IPI00536522
            RefSeq:NP_187556.1 UniGene:At.53235 PRIDE:Q9S710
            EnsemblPlants:AT3G09450.1 GeneID:820103 KEGG:ath:AT3G09450
            TAIR:At3g09450 eggNOG:NOG128078 InParanoid:Q9S710 OMA:WDNITHE
            PhylomeDB:Q9S710 ProtClustDB:CLSN2915683 Genevestigator:Q9S710
            Uniprot:Q9S710
        Length = 775

 Score = 849 (303.9 bits), Expect = 1.0e-156, Sum P(2) = 1.0e-156
 Identities = 196/473 (41%), Positives = 267/473 (56%)

Query:   320 APETQKNCKDE-SL-WSLKAIS-STEDVPASFFFYCIKLLQ-DGLPVAPNAEFVVNETRE 375
             AP ++   K + SL W  +A S ST  +P  FF YC++L + D L +  +++ V   T E
Sbjct:   300 APRSESTLKSQDSLGWHHEAESLSTAALPVCFFRYCVELFRGDFLSLRQDSKSVNGRTTE 359

Query:   376 THTEGSSESQNQ-NKFKCKLKWIXXXXXXXXXXXXXVFALKCSLSLGLAVILGLMYNKEN 434
                  ++E  +   KF     W              VFA KCS+SLGLAV+ G++YNK N
Sbjct:   360 EEIHPANEGLSMARKF-----W--DILCVWMARERFVFAFKCSISLGLAVLFGILYNKNN 412

Query:   435 GYWSGLTIAISFATNRQATFKVANARAQGTAMGSVYGVICSFLLQKSVNFRFLPLLPWII 494
             GYWSGLT+AIS  + RQAT  VAN+R QGTAMGSVYG+IC  + Q+   FRFLPLLPWII
Sbjct:   413 GYWSGLTVAISLVSGRQATLTVANSRLQGTAMGSVYGLICCSVFQRLEEFRFLPLLPWII 472

Query:   495 FSSFLRHSRMYEEAGAISAVIGALLILGRKNYGTPSEFAIARITEASLGLICFIIVEILF 554
              + F+RHS++Y + G ++A I ALLILGR+NYG P+EFAIARI EAS+GL+CF+  EIL 
Sbjct:   473 LAVFMRHSKVYGQPGGVTAAIAALLILGRRNYGAPTEFAIARIVEASIGLLCFVFGEILV 532

Query:   555 QPXXXXXXXXXXXXXXXXXXXDGIKDIVLFADQKGKATPTALRDKQKRLKSHINELDKFI 614
              P                   D I+ +VL ++QK +     LR  Q +LKSH+  L++F 
Sbjct:   533 TPARAATLARTEISHCLDALLDCIQSLVLCSEQKNQKVVADLRKSQVKLKSHVEALERFA 592

Query:   615 AEAEMEPNFWFLP-FHGSCYENILASLSRMADLLLFVAYKTEFLSQLSERFGVSWKQIQE 673
             AEA  EP   FL   +   Y  +L S S+++DL L+V    + LS +       W    +
Sbjct:   593 AEALTEPKIPFLRRLNTDSYNRLLGSFSKISDLCLYVCDGLKNLSGVQPTLAFPW----D 648

Query:   674 PINDDLELFKEKVGHSLKCFEEVILIKSLAVLAPERQNRNISHDVESGRLPNEDVP-RTL 732
              I  +L  F+EK+  S+KC +E+   KS A L  E Q R I HDVE+G   N++     L
Sbjct:   649 NITHELRAFQEKLHPSVKCLKEISQTKSQARLQKELQKRKICHDVEAGTTSNDNYSYMEL 708

Query:   733 SPDXXXXXXXLSSFLQHSKEVANSINGYDGEEKHLSQTVLVLNGLGFCISSLM 785
              P          SF+   KE  + I+    ++   S+T L L+ LGFCIS LM
Sbjct:   709 GPSQADVERFSVSFVMLLKEATDKISCNTADDAFKSETALCLSSLGFCISRLM 761

 Score = 700 (251.5 bits), Expect = 1.0e-156, Sum P(2) = 1.0e-156
 Identities = 175/387 (45%), Positives = 229/387 (59%)

Query:    15 WRRRLGSALRTALACSIVGFTTLYSPEHLRHMPAFPAFSYVTTILI-LSDA--TLGDTLR 71
             W  RLG ALRTA+AC IV  TTLY P+ LRH   FPAFSY+TTILI LSDA  T G+ L+
Sbjct:     6 WLERLGLALRTAMACLIVSLTTLYGPKPLRHFTTFPAFSYLTTILIWLSDAEPTYGEVLK 65

Query:    72 GCWHALYATIQIMIPSILCLWLVGPDRF-TADVAAVVVTLMSFVVALPESTALMAKRIAF 130
              C    YAT Q +  +++ + +VGP       VA V V L SF+VA P ST+L+ KRIAF
Sbjct:    66 CCLDVSYATFQTIAIALVSVLVVGPASLGNGLVAPVAVALASFIVAFPVSTSLLTKRIAF 125

Query:   131 GQIVIVCVGTVV-HGAKTGIVMHPIHVASSTALGALASVVAMLLPYPRLAYHEVKKSSKL 189
             GQIV+V V  VV +G    + M P+HVA STALGA+AS++A+LLP+PRLA+ ++ K  KL
Sbjct:   126 GQIVVVYVTFVVFNGEVAHVFMLPVHVAGSTALGAIASLIAVLLPFPRLAHSQMSKGCKL 185

Query:   190 YAENASEMLNHFVKAFCAQDNTAALDSISEAKSLFKAGAKQLLSIKDKQEGMLWERPQIR 249
             YAENA E LN FV+   A+DNT A   I+ A SL  A    L +IK   E + WERP  R
Sbjct:   186 YAENALERLNMFVEIMMARDNTTAQVLIARAASLSAAAKNTLKNIKIHHERISWERPDTR 245

Query:   250 FLKPNYK-DPREKLQELEIPIRGMELALTSCPSFPVGMIDEDLRDVLQSLKAEIGLKLEQ 308
             FL    K DP EKL   +  +RG+ELAL SC SFP GM  ++L  +L+  +  I      
Sbjct:   246 FLSRKQKLDPAEKLHATDFLLRGLELALGSCSSFPQGMSRDELTRLLEGPRTHI------ 299

Query:   309 AKCYASFDATTAPETQKNCKDE-SL-WSLKAIS-STEDVPASFFFYCIKLLQ-DGLPVAP 364
                        AP ++   K + SL W  +A S ST  +P  FF YC++L + D L +  
Sbjct:   300 -----------APRSESTLKSQDSLGWHHEAESLSTAALPVCFFRYCVELFRGDFLSLRQ 348

Query:   365 NAEFVVNETRETHTEGSSESQNQ-NKF 390
             +++ V   T E     ++E  +   KF
Sbjct:   349 DSKSVNGRTTEEEIHPANEGLSMARKF 375


>TAIR|locus:2053200 [details] [associations]
            symbol:AT2G28780 species:3702 "Arabidopsis thaliana"
            [GO:0005886 "plasma membrane" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] [GO:0009734 "auxin mediated
            signaling pathway" evidence=RCA] EMBL:CP002685
            GenomeReviews:CT485783_GR EMBL:BT004090 EMBL:BT008605
            IPI:IPI00533863 RefSeq:NP_180444.2 UniGene:At.27789
            ProteinModelPortal:Q84W96 PaxDb:Q84W96 PRIDE:Q84W96
            EnsemblPlants:AT2G28780.1 GeneID:817427 KEGG:ath:AT2G28780
            TAIR:At2g28780 eggNOG:NOG289418 HOGENOM:HOG000239132
            InParanoid:Q84W96 OMA:CSIMVEL PhylomeDB:Q84W96
            ProtClustDB:CLSN2918120 Genevestigator:Q84W96 Uniprot:Q84W96
        Length = 796

 Score = 846 (302.9 bits), Expect = 1.7e-84, P = 1.7e-84
 Identities = 213/560 (38%), Positives = 305/560 (54%)

Query:   287 IDEDLRDVLQSLKAEI-GLKL---EQAKCYASFDATTAPETQKNCKDESLWSLKAISSTE 342
             ++++  + LQS++  + G+++    ++   +S  A    E  KN ++  + S+K ++++ 
Sbjct:   253 VNDNKGEKLQSMEIALRGMEMVVASKSPIPSSLLAGEVKEDLKNIQERVILSIKRVNNSS 312

Query:   343 D---VPASFFFY---CIKLLQD--GLPVAPNAEFVVNETR--ETHTEGSSESQN----QN 388
                  P S       C++ LQ+  G P      F +   R  ET      E       +N
Sbjct:   313 QPSVTPESDPKNPDECLQTLQEIPGTPQDLPFYFFLFCIRLLETIIIAKPEENKVKVLEN 372

Query:   389 KFKCKLKWIXXXXXXXXXXXXXVFALKCSLSLGLAVILGLMYNKENGYWSGLTIAISFAT 448
             KFK +  WI               ALK SLSLGLA++LG M++K NGYW+GL +A+SFA 
Sbjct:   373 KFKTR-SWISDWDSKKIMP-----ALKLSLSLGLAILLGSMFSKPNGYWAGLPVAVSFAA 426

Query:   449 NRQATFKVANARAQGTAMGSVYGVICSFLLQKSVNFRFLPLLPWIIFSSFLRHSRMYEEA 508
              R+ATFKV N +AQGT +G+VYGV+  F+ QK +  RFL LLPW +FSSFL  S+MY +A
Sbjct:   427 AREATFKVTNVKAQGTVIGTVYGVMGCFVFQKFLTVRFLSLLPWFLFSSFLSRSKMYGQA 486

Query:   509 GAISAVIGALLILGRKNYGTPSEFAIARITEASLGLICFIIVEILFQPXXXXXXXXXXXX 568
             G ISA IGA+LILGRKN+G PSEFAI RI E  +GL C I+VE++FQP            
Sbjct:   487 GGISAAIGAVLILGRKNFGPPSEFAIERIIETFIGLSCSIMVELVFQPTRAANIAKLELS 546

Query:   569 XXXXXXXDGIKDIVLFADQKGKATPTALRDKQKRLKSHINELDKFIAEAEMEPNFWFLPF 628
                    +      LF     KA+   + + QK+L+SH+NEL KF AEA  EP+FWF PF
Sbjct:   547 RSFHALYECAS---LFG---AKASKADIMESQKKLRSHLNELKKFTAEAHAEPSFWFSPF 600

Query:   629 HGSCYENILASLSRMADLLLFVAYKTEFLSQLSERFGVSWKQIQEPINDDLELFKEKVGH 688
             + SCYE +  SLS+MADLL F  Y   FL +  +      K+I   ++ DL+   E +G 
Sbjct:   601 NFSCYEKLFKSLSKMADLLQFSGYAIGFLGEQGKTKSPQCKEILSNVDKDLKSLTESIGL 660

Query:   689 SLKCFEEVILIKSLAVLAPE-RQNRNISHDVESGRLPNEDVPRTLS-PDXXXXXXXLSSF 746
               K FEE+ L+KSL  L     ++ N S D+E G+ PN      +S P+       L ++
Sbjct:   661 LAKSFEEITLLKSLDALEKALAKSDNTSWDIELGKTPNPSFSTAVSEPEKI-----LETY 715

Query:   747 LQHSKEVANSINGY--DGEEK---HLSQTVLVLNGLGFCISSLMXXXXXXXXXXXXXXXX 801
             LQH + VA+ +     DGEE+     S+ VL L  LGFC+  +                 
Sbjct:   716 LQHCRSVADGLFRVEEDGEEEVEVDKSEVVLSLCALGFCVERIGKETREIEEMVKEVVQS 775

Query:   802 XNPTRNINLYEISCKLNATY 821
              NP+ ++NL+EISCK+ + Y
Sbjct:   776 ENPSSHVNLHEISCKIRSLY 795

 Score = 737 (264.5 bits), Expect = 5.9e-73, P = 5.9e-73
 Identities = 158/350 (45%), Positives = 228/350 (65%)

Query:    12 KALWRRRLGSALRTALACSIVGFTTLYSPEHLRHMPAFPAFSYVTTILILSDATLGDTLR 71
             +A+WR  L SA RTALAC+IVG  TLY PE +    AFPAFSYVT ILI++DATLGDTLR
Sbjct:     8 RAMWRTCLASAFRTALACTIVGSATLYGPEWINRHVAFPAFSYVTVILIITDATLGDTLR 67

Query:    72 GCWHALYATIQIMIPSILCLWLVGPDRFTADVAAVVVTLMSFVVALPES-TALMAKRIAF 130
             GCW ALYAT Q + P+I+ L L+ P R TA+  A+   L +FVV LP S T L+AKRIA 
Sbjct:    68 GCWLALYATCQSVGPAIVTLKLIRPARLTAETTALAAALAAFVVVLPNSSTHLVAKRIAL 127

Query:   131 GQIVIVCVGTVVHGAKTGIVMHPIHVASSTALGALASVVAMLLPYPRLAYHEVKKSSKLY 190
             GQIV++ V   + GAKT  VMHP+ VA+STALG +A V+A+L+P PRLA  EVK+S K  
Sbjct:   128 GQIVLIYVIGYIKGAKTDPVMHPLQVAASTALGVVACVLALLVPLPRLATCEVKQSCKEL 187

Query:   191 AENASEMLNHFVKAFCAQDNTAALDSISEAKSLFKAGAKQLLSIKDKQEGMLWERPQIRF 250
              +N +  +  ++KAFC+ D+ +A  S+S+A+ L ++ +K   ++K  Q  M WER   + 
Sbjct:   188 GQNVTTRVKLYMKAFCSDDSMSATASVSQARVLARSSSKLYQTLKRYQPSMTWERLPFKI 247

Query:   251 LK-PNYKDPR-EKLQELEIPIRGMELALTSCPSFPVGMIDEDLRDVLQSLKAEIGLKLEQ 308
              +  N  D + EKLQ +EI +RGME+ + S    P  ++  ++++ L++++  + L +++
Sbjct:   248 WRWQNVNDNKGEKLQSMEIALRGMEMVVASKSPIPSSLLAGEVKEDLKNIQERVILSIKR 307

Query:   309 AKCYASFDATTAPETQKNCKDESLWSLKAISST-EDVPASFFFYCIKLLQ 357
                  S   +  PE+     DE L +L+ I  T +D+P  FF +CI+LL+
Sbjct:   308 VN--NSSQPSVTPESDPKNPDECLQTLQEIPGTPQDLPFYFFLFCIRLLE 355


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.135   0.398    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      823       767   0.00092  121 3  11 22  0.50    33
                                                     37  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  622 (66 KB)
  Total size of DFA:  377 KB (2186 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  68.80u 0.11s 68.91t   Elapsed:  00:00:05
  Total cpu time:  68.80u 0.11s 68.91t   Elapsed:  00:00:05
  Start:  Tue May 21 04:13:35 2013   End:  Tue May 21 04:13:40 2013

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