BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003403
(823 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|B1JKI3|AAEB_YERPY p-hydroxybenzoic acid efflux pump subunit AaeB OS=Yersinia
pseudotuberculosis serotype O:3 (strain YPIII) GN=aaeB
PE=3 SV=1
Length = 651
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 75/167 (44%), Gaps = 18/167 (10%)
Query: 405 PSLESLVFALKCSLSLGLAVILGLMYNKENGYWSGLTIAI-----SFATNRQ----ATFK 455
PS L FA K S ++ A+ LG E WS LT AI +FA + A
Sbjct: 4 PSFIRLRFAFKLSFAIVAALFLGFHLQLETPRWSVLTAAIVSAGPAFAAGGEPFSGAIRH 63
Query: 456 VANARAQGTAMGSVYGVICSFLLQKSVNFRFLPLLPW----IIFSSFLR--HSRMYEEAG 509
R GT +G + G++ L ++ + W SS +R +S + AG
Sbjct: 64 RGWLRIIGTFIGCIGGLVIIVLTIRAPVLTLMLCCLWAGICTWISSLVRVENSYAFGLAG 123
Query: 510 AISAVIGALLILGRKNYGTPSEFAIARITEASLGLICFIIVEILFQP 556
+ +I ++ G TP +FA+ R +E LG++C ++ ++LF P
Sbjct: 124 YTALII--IVTTGETPLLTP-QFAVERCSEIVLGIVCAVMADLLFSP 167
>sp|Q665H2|AAEB_YERPS p-hydroxybenzoic acid efflux pump subunit AaeB OS=Yersinia
pseudotuberculosis serotype I (strain IP32953) GN=aaeB
PE=3 SV=1
Length = 651
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 75/167 (44%), Gaps = 18/167 (10%)
Query: 405 PSLESLVFALKCSLSLGLAVILGLMYNKENGYWSGLTIAI-----SFATNRQ----ATFK 455
PS L FA K S ++ A+ LG E WS LT AI +FA + A
Sbjct: 4 PSFIRLRFAFKLSFAIVAALFLGFHLQLETPRWSVLTAAIVSAGPAFAAGGEPFSGAIRH 63
Query: 456 VANARAQGTAMGSVYGVICSFLLQKSVNFRFLPLLPW----IIFSSFLR--HSRMYEEAG 509
R GT +G + G++ L ++ + W SS +R +S + AG
Sbjct: 64 RGWLRIIGTFIGCIGGLVIIVLTIRAPVLTLMLCCLWAGICTWISSLVRVENSYAFGLAG 123
Query: 510 AISAVIGALLILGRKNYGTPSEFAIARITEASLGLICFIIVEILFQP 556
+ +I ++ G TP +FA+ R +E LG++C ++ ++LF P
Sbjct: 124 YTALII--IVTTGETPLLTP-QFAVERCSEIVLGIVCAVMADLLFSP 167
>sp|A4THF0|AAEB_YERPP p-hydroxybenzoic acid efflux pump subunit AaeB OS=Yersinia pestis
(strain Pestoides F) GN=aaeB PE=3 SV=1
Length = 651
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 75/167 (44%), Gaps = 18/167 (10%)
Query: 405 PSLESLVFALKCSLSLGLAVILGLMYNKENGYWSGLTIAI-----SFATNRQ----ATFK 455
PS L FA K S ++ A+ LG E WS LT AI +FA + A
Sbjct: 4 PSFIRLRFAFKLSFAIVAALFLGFHLQLETPRWSVLTAAIVSAGPAFAAGGEPFSGAIRH 63
Query: 456 VANARAQGTAMGSVYGVICSFLLQKSVNFRFLPLLPW----IIFSSFLR--HSRMYEEAG 509
R GT +G + G++ L ++ + W SS +R +S + AG
Sbjct: 64 RGWLRIIGTFIGCIGGLVIIVLTIRAPVLTLMLCCLWAGICTWISSLVRVENSYAFGLAG 123
Query: 510 AISAVIGALLILGRKNYGTPSEFAIARITEASLGLICFIIVEILFQP 556
+ +I ++ G TP +FA+ R +E LG++C ++ ++LF P
Sbjct: 124 YTALII--IVTTGETPLLTP-QFAVERCSEIVLGIVCAVMADLLFSP 167
>sp|Q1CDW7|AAEB_YERPN p-hydroxybenzoic acid efflux pump subunit AaeB OS=Yersinia pestis
bv. Antiqua (strain Nepal516) GN=aaeB PE=3 SV=1
Length = 651
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 75/167 (44%), Gaps = 18/167 (10%)
Query: 405 PSLESLVFALKCSLSLGLAVILGLMYNKENGYWSGLTIAI-----SFATNRQ----ATFK 455
PS L FA K S ++ A+ LG E WS LT AI +FA + A
Sbjct: 4 PSFIRLRFAFKLSFAIVAALFLGFHLQLETPRWSVLTAAIVSAGPAFAAGGEPFSGAIRH 63
Query: 456 VANARAQGTAMGSVYGVICSFLLQKSVNFRFLPLLPW----IIFSSFLR--HSRMYEEAG 509
R GT +G + G++ L ++ + W SS +R +S + AG
Sbjct: 64 RGWLRIIGTFIGCIGGLVIIVLTIRAPVLTLMLCCLWAGICTWISSLVRVENSYAFGLAG 123
Query: 510 AISAVIGALLILGRKNYGTPSEFAIARITEASLGLICFIIVEILFQP 556
+ +I ++ G TP +FA+ R +E LG++C ++ ++LF P
Sbjct: 124 YTALII--IVTTGETPLLTP-QFAVERCSEIVLGIVCAVMADLLFSP 167
>sp|A9R1V8|AAEB_YERPG p-hydroxybenzoic acid efflux pump subunit AaeB OS=Yersinia pestis
bv. Antiqua (strain Angola) GN=aaeB PE=3 SV=1
Length = 651
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 75/167 (44%), Gaps = 18/167 (10%)
Query: 405 PSLESLVFALKCSLSLGLAVILGLMYNKENGYWSGLTIAI-----SFATNRQ----ATFK 455
PS L FA K S ++ A+ LG E WS LT AI +FA + A
Sbjct: 4 PSFIRLRFAFKLSFAIVAALFLGFHLQLETPRWSVLTAAIVSAGPAFAAGGEPFSGAIRH 63
Query: 456 VANARAQGTAMGSVYGVICSFLLQKSVNFRFLPLLPW----IIFSSFLR--HSRMYEEAG 509
R GT +G + G++ L ++ + W SS +R +S + AG
Sbjct: 64 RGWLRIIGTFIGCIGGLVIIVLTIRAPVLTLMLCCLWAGICTWISSLVRVENSYAFGLAG 123
Query: 510 AISAVIGALLILGRKNYGTPSEFAIARITEASLGLICFIIVEILFQP 556
+ +I ++ G TP +FA+ R +E LG++C ++ ++LF P
Sbjct: 124 YTALII--IVTTGETPLLTP-QFAVERCSEIVLGIVCAVMADLLFSP 167
>sp|Q8ZAU8|AAEB_YERPE p-hydroxybenzoic acid efflux pump subunit AaeB OS=Yersinia pestis
GN=aaeB PE=3 SV=1
Length = 651
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 75/167 (44%), Gaps = 18/167 (10%)
Query: 405 PSLESLVFALKCSLSLGLAVILGLMYNKENGYWSGLTIAI-----SFATNRQ----ATFK 455
PS L FA K S ++ A+ LG E WS LT AI +FA + A
Sbjct: 4 PSFIRLRFAFKLSFAIVAALFLGFHLQLETPRWSVLTAAIVSAGPAFAAGGEPFSGAIRH 63
Query: 456 VANARAQGTAMGSVYGVICSFLLQKSVNFRFLPLLPW----IIFSSFLR--HSRMYEEAG 509
R GT +G + G++ L ++ + W SS +R +S + AG
Sbjct: 64 RGWLRIIGTFIGCIGGLVIIVLTIRAPVLTLMLCCLWAGICTWISSLVRVENSYAFGLAG 123
Query: 510 AISAVIGALLILGRKNYGTPSEFAIARITEASLGLICFIIVEILFQP 556
+ +I ++ G TP +FA+ R +E LG++C ++ ++LF P
Sbjct: 124 YTALII--IVTTGETPLLTP-QFAVERCSEIVLGIVCAVMADLLFSP 167
>sp|B2K436|AAEB_YERPB p-hydroxybenzoic acid efflux pump subunit AaeB OS=Yersinia
pseudotuberculosis serotype IB (strain PB1/+) GN=aaeB
PE=3 SV=1
Length = 651
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 75/167 (44%), Gaps = 18/167 (10%)
Query: 405 PSLESLVFALKCSLSLGLAVILGLMYNKENGYWSGLTIAI-----SFATNRQ----ATFK 455
PS L FA K S ++ A+ LG E WS LT AI +FA + A
Sbjct: 4 PSFIRLRFAFKLSFAIVAALFLGFHLQLETPRWSVLTAAIVSAGPAFAAGGEPFSGAIRH 63
Query: 456 VANARAQGTAMGSVYGVICSFLLQKSVNFRFLPLLPW----IIFSSFLR--HSRMYEEAG 509
R GT +G + G++ L ++ + W SS +R +S + AG
Sbjct: 64 RGWLRIIGTFIGCIGGLVIIVLTIRAPVLTLMLCCLWAGICTWISSLVRVENSYAFGLAG 123
Query: 510 AISAVIGALLILGRKNYGTPSEFAIARITEASLGLICFIIVEILFQP 556
+ +I ++ G TP +FA+ R +E LG++C ++ ++LF P
Sbjct: 124 YTALII--IVTTGETPLLTP-QFAVERCSEIVLGIVCAVMADLLFSP 167
>sp|Q1C1L1|AAEB_YERPA p-hydroxybenzoic acid efflux pump subunit AaeB OS=Yersinia pestis
bv. Antiqua (strain Antiqua) GN=aaeB PE=3 SV=1
Length = 651
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 75/167 (44%), Gaps = 18/167 (10%)
Query: 405 PSLESLVFALKCSLSLGLAVILGLMYNKENGYWSGLTIAI-----SFATNRQ----ATFK 455
PS L FA K S ++ A+ LG E WS LT AI +FA + A
Sbjct: 4 PSFIRLRFAFKLSFAIVAALFLGFHLQLETPRWSVLTAAIVSAGPAFAAGGEPFSGAIRH 63
Query: 456 VANARAQGTAMGSVYGVICSFLLQKSVNFRFLPLLPW----IIFSSFLR--HSRMYEEAG 509
R GT +G + G++ L ++ + W SS +R +S + AG
Sbjct: 64 RGWLRIIGTFIGCIGGLVIIVLTIRAPVLTLMLCCLWAGICTWISSLVRVENSYAFGLAG 123
Query: 510 AISAVIGALLILGRKNYGTPSEFAIARITEASLGLICFIIVEILFQP 556
+ +I ++ G TP +FA+ R +E LG++C ++ ++LF P
Sbjct: 124 YTALII--IVTTGETPLLTP-QFAVERCSEIVLGIVCAVMADLLFSP 167
>sp|A7FDT6|AAEB_YERP3 p-hydroxybenzoic acid efflux pump subunit AaeB OS=Yersinia
pseudotuberculosis serotype O:1b (strain IP 31758)
GN=aaeB PE=3 SV=1
Length = 651
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 75/167 (44%), Gaps = 18/167 (10%)
Query: 405 PSLESLVFALKCSLSLGLAVILGLMYNKENGYWSGLTIAI-----SFATNRQ----ATFK 455
PS L FA K S ++ A+ LG E WS LT AI +FA + A
Sbjct: 4 PSFIRLRFAFKLSFAIVAALFLGFHLQLETPRWSVLTAAIVSAGPAFAAGGEPFSGAIRH 63
Query: 456 VANARAQGTAMGSVYGVICSFLLQKSVNFRFLPLLPW----IIFSSFLR--HSRMYEEAG 509
R GT +G + G++ L ++ + W SS +R +S + AG
Sbjct: 64 RGWLRIIGTFIGCIGGLVIIVLTIRAPVLTLMLCCLWAGICTWISSLVRVENSYAFGLAG 123
Query: 510 AISAVIGALLILGRKNYGTPSEFAIARITEASLGLICFIIVEILFQP 556
+ +I ++ G TP +FA+ R +E LG++C ++ ++LF P
Sbjct: 124 YTALII--IVTTGETPLLTP-QFAVERCSEIVLGIVCAVMADLLFSP 167
>sp|C6DIM3|AAEB_PECCP p-hydroxybenzoic acid efflux pump subunit AaeB OS=Pectobacterium
carotovorum subsp. carotovorum (strain PC1) GN=aaeB PE=3
SV=1
Length = 662
Score = 44.7 bits (104), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 67/172 (38%), Gaps = 22/172 (12%)
Query: 402 FLLPSLESLVFALKCSLSLGLAVILGLMYNKENGYWSGLTIAI--------------SFA 447
F P L FA K S ++ L++ LG E WS LT AI S A
Sbjct: 12 FTTPKFARLRFAFKLSFAIVLSLFLGFHLQLETPRWSVLTAAIVAAGPAFAAGGEPFSGA 71
Query: 448 TNRQATFKVANARAQGTAMGSVYGVICSFLLQKSVNFRFLPLLPWIIFSSFLRHSRMYEE 507
+ +V GT +G + +I ++ + W +++ E
Sbjct: 72 IRHRGMLRVV-----GTFIGCIGALIIIIATVRAPVVMLMLCCIWAGLCTWVSSLVKVEN 126
Query: 508 AGAISAVIGALLILGRKNYGTP---SEFAIARITEASLGLICFIIVEILFQP 556
A LI+ GTP +FA+ R +E LG++C I+ ++LF P
Sbjct: 127 AYVFGLAGYTTLIIIVSTQGTPLLTPQFAVERCSEIVLGIVCAILADLLFSP 178
>sp|Q6DAH4|AAEB_ERWCT p-hydroxybenzoic acid efflux pump subunit AaeB OS=Erwinia
carotovora subsp. atroseptica (strain SCRI 1043 / ATCC
BAA-672) GN=aaeB PE=3 SV=1
Length = 662
Score = 42.7 bits (99), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 66/171 (38%), Gaps = 12/171 (7%)
Query: 398 SSSLFLLPSLESLVFALKCSLSLGLAVILGLMYNKENGYWSGLTIAISFATNRQ------ 451
S F P L FA K S ++ L++ LG E WS LT AI A
Sbjct: 8 GSLFFTTPKFARLRFAFKLSFAIVLSLFLGFHLQLETPRWSVLTAAIVAAGPAFAAGGEP 67
Query: 452 ---ATFKVANARAQGTAMGSVYGVICSFLLQKSVNFRFLPLLPWIIFSSFLRHSRMYEEA 508
A R GT +G + ++ ++ + W +++ E A
Sbjct: 68 FSGAIRHRGMLRIIGTFIGCIGALVIIIATVRAPVVMLMLCCIWAGLCTWVSSLVKVENA 127
Query: 509 GAISAVIGALLILGRKNYGTP---SEFAIARITEASLGLICFIIVEILFQP 556
LI+ GTP +FA+ R +E LG++C I+ ++LF P
Sbjct: 128 YIFGLAGYTALIIIVSTQGTPLLTPQFAVERCSEIVLGIVCAILADLLFSP 178
>sp|Q31WA8|AAEB_SHIBS p-hydroxybenzoic acid efflux pump subunit AaeB OS=Shigella boydii
serotype 4 (strain Sb227) GN=aaeB PE=3 SV=1
Length = 655
Score = 41.2 bits (95), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 71/162 (43%), Gaps = 14/162 (8%)
Query: 408 ESLVFALKCSLSLGLAVILGLMYNKENGYWSGLTIAISFATNRQ---------ATFKVAN 458
+ + FA+K + ++ LA+ +G + E W+ LT AI A A
Sbjct: 9 QHIRFAVKLATAIVLALFVGFHFQLETPRWAVLTAAIVAAGPAFAAGGEPYSGAIRYRGF 68
Query: 459 ARAQGTAMGSVYGVICSFLLQKSVNFRFLPLLPWIIF----SSFLRHSRMYEEAGAISAV 514
R GT +G + G++ + ++ L W F SS +R Y A
Sbjct: 69 LRIIGTFIGCIAGLVIIIAMIRAPLLMILVCCIWAGFCTWISSLVRIENSYAWGLAGYTA 128
Query: 515 IGALLILGRKNYGTPSEFAIARITEASLGLICFIIVEILFQP 556
+ ++ + + TP +FA+ R +E +G++C II ++LF P
Sbjct: 129 LIIVITIQPEPLLTP-QFAVERCSEIVIGIVCAIIADLLFSP 169
>sp|B5YSW6|AAEB_ECO5E p-hydroxybenzoic acid efflux pump subunit AaeB OS=Escherichia coli
O157:H7 (strain EC4115 / EHEC) GN=aaeB PE=3 SV=1
Length = 655
Score = 40.4 bits (93), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 71/162 (43%), Gaps = 14/162 (8%)
Query: 408 ESLVFALKCSLSLGLAVILGLMYNKENGYWSGLTIAISFATNRQ---------ATFKVAN 458
+ + FA+K + ++ LA+ +G + E W+ LT AI A A
Sbjct: 9 QHIRFAVKLATAIVLALFVGFHFQLETPRWAVLTAAIVAAGPAFAAGGEPYSGAIRYRGF 68
Query: 459 ARAQGTAMGSVYGVICSFLLQKSVNFRFLPLLPWIIF----SSFLRHSRMYEEAGAISAV 514
R GT +G + G++ + ++ L W F SS +R Y A
Sbjct: 69 LRIIGTFIGCIAGLVIIIAMIRAPLLMILVCCIWAGFCTWISSLVRIENSYAWGLAGYTA 128
Query: 515 IGALLILGRKNYGTPSEFAIARITEASLGLICFIIVEILFQP 556
+ ++ + + TP +FA+ R +E +G++C I+ ++LF P
Sbjct: 129 LIIVITIQPEPLLTP-QFAVERCSEIVIGIVCAIMADLLFSP 169
>sp|Q8X9E6|AAEB_ECO57 p-hydroxybenzoic acid efflux pump subunit AaeB OS=Escherichia coli
O157:H7 GN=aaeB PE=3 SV=1
Length = 655
Score = 40.4 bits (93), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 71/162 (43%), Gaps = 14/162 (8%)
Query: 408 ESLVFALKCSLSLGLAVILGLMYNKENGYWSGLTIAISFATNRQ---------ATFKVAN 458
+ + FA+K + ++ LA+ +G + E W+ LT AI A A
Sbjct: 9 QHIRFAVKLATAIVLALFVGFHFQLETPRWAVLTAAIVAAGPAFAAGGEPYSGAIRYRGF 68
Query: 459 ARAQGTAMGSVYGVICSFLLQKSVNFRFLPLLPWIIF----SSFLRHSRMYEEAGAISAV 514
R GT +G + G++ + ++ L W F SS +R Y A
Sbjct: 69 LRIIGTFIGCIAGLVIIIAMIRAPLLMILVCCIWAGFCTWISSLVRIENSYAWGLAGYTA 128
Query: 515 IGALLILGRKNYGTPSEFAIARITEASLGLICFIIVEILFQP 556
+ ++ + + TP +FA+ R +E +G++C I+ ++LF P
Sbjct: 129 LIIVITIQPEPLLTP-QFAVERCSEIVIGIVCAIMADLLFSP 169
>sp|Q8FD51|AAEB_ECOL6 p-hydroxybenzoic acid efflux pump subunit AaeB OS=Escherichia coli
O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=aaeB PE=3
SV=1
Length = 655
Score = 40.0 bits (92), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 71/162 (43%), Gaps = 14/162 (8%)
Query: 408 ESLVFALKCSLSLGLAVILGLMYNKENGYWSGLTIAISFATNRQ---------ATFKVAN 458
+ + FA+K + ++ LA+ +G + E W+ LT AI A A
Sbjct: 9 QHIRFAVKLATAIVLALFVGFHFQLETPRWAVLTAAIVAAGPAFAAGGEPYSGAIRYRGF 68
Query: 459 ARAQGTAMGSVYGVICSFLLQKSVNFRFLPLLPWIIF----SSFLRHSRMYEEAGAISAV 514
R GT +G + G++ + ++ L W F SS +R Y A
Sbjct: 69 LRIIGTFIGCIAGLVIIIAMIRAPLLMILVCCIWAGFCTWISSLVRIENSYAWGLAGYTA 128
Query: 515 IGALLILGRKNYGTPSEFAIARITEASLGLICFIIVEILFQP 556
+ ++ + + TP +FA+ R +E +G++C I+ ++LF P
Sbjct: 129 LIIVITIQPEPLLTP-QFAVERCSEIVIGIVCAIMADLLFSP 169
>sp|Q3YX07|AAEB_SHISS p-hydroxybenzoic acid efflux pump subunit AaeB OS=Shigella sonnei
(strain Ss046) GN=aaeB PE=3 SV=1
Length = 655
Score = 40.0 bits (92), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 71/162 (43%), Gaps = 14/162 (8%)
Query: 408 ESLVFALKCSLSLGLAVILGLMYNKENGYWSGLTIAISFATNRQ---------ATFKVAN 458
+ + FA+K + ++ LA+ +G + E W+ LT AI A A
Sbjct: 9 QHIRFAVKLATAIVLALFVGFHFQLETPRWAVLTAAIVAAGPAFAAGGEPYSGAIRYRGF 68
Query: 459 ARAQGTAMGSVYGVICSFLLQKSVNFRFLPLLPWIIF----SSFLRHSRMYEEAGAISAV 514
R GT +G + G++ + ++ L W F SS +R Y A
Sbjct: 69 LRIIGTFIGCIAGLVIIIAMIRAPLLMILVCCIWAGFCTWISSLVRIENSYAWGLAGYTA 128
Query: 515 IGALLILGRKNYGTPSEFAIARITEASLGLICFIIVEILFQP 556
+ ++ + + TP +FA+ R +E +G++C I+ ++LF P
Sbjct: 129 LIIVITIQPEPLLTP-QFAVERCSEIVIGIVCAIMADLLFSP 169
>sp|Q83JE2|AAEB_SHIFL p-hydroxybenzoic acid efflux pump subunit AaeB OS=Shigella flexneri
GN=aaeB PE=3 SV=1
Length = 655
Score = 40.0 bits (92), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 71/162 (43%), Gaps = 14/162 (8%)
Query: 408 ESLVFALKCSLSLGLAVILGLMYNKENGYWSGLTIAISFATNRQ---------ATFKVAN 458
+ + FA+K + ++ LA+ +G + E W+ LT AI A A
Sbjct: 9 QHIRFAVKLATAIVLALFVGFHFQLETPRWAVLTAAIVAAGPAFAAGGEPYSGAIRYRGF 68
Query: 459 ARAQGTAMGSVYGVICSFLLQKSVNFRFLPLLPWIIF----SSFLRHSRMYEEAGAISAV 514
R GT +G + G++ + ++ L W F SS +R Y A
Sbjct: 69 LRIIGTFIGCIAGLVIIIAMIRAPLLMILVCCIWAGFCTWISSLVRIENSYAWGLAGYTA 128
Query: 515 IGALLILGRKNYGTPSEFAIARITEASLGLICFIIVEILFQP 556
+ ++ + + TP +FA+ R +E +G++C I+ ++LF P
Sbjct: 129 LIIVITIQPEPLLTP-QFAVERCSEIVIGIVCAIMADLLFSP 169
>sp|Q0T048|AAEB_SHIF8 p-hydroxybenzoic acid efflux pump subunit AaeB OS=Shigella flexneri
serotype 5b (strain 8401) GN=aaeB PE=3 SV=1
Length = 655
Score = 40.0 bits (92), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 71/162 (43%), Gaps = 14/162 (8%)
Query: 408 ESLVFALKCSLSLGLAVILGLMYNKENGYWSGLTIAISFATNRQ---------ATFKVAN 458
+ + FA+K + ++ LA+ +G + E W+ LT AI A A
Sbjct: 9 QHIRFAVKLATAIVLALFVGFHFQLETPRWAVLTAAIVAAGPAFAAGGEPYSGAIRYRGF 68
Query: 459 ARAQGTAMGSVYGVICSFLLQKSVNFRFLPLLPWIIF----SSFLRHSRMYEEAGAISAV 514
R GT +G + G++ + ++ L W F SS +R Y A
Sbjct: 69 LRIIGTFIGCIAGLVIIIAMIRAPLLMILVCCIWAGFCTWISSLVRIENSYAWGLAGYTA 128
Query: 515 IGALLILGRKNYGTPSEFAIARITEASLGLICFIIVEILFQP 556
+ ++ + + TP +FA+ R +E +G++C I+ ++LF P
Sbjct: 129 LIIVITIQPEPLLTP-QFAVERCSEIVIGIVCAIMADLLFSP 169
>sp|B6I1V8|AAEB_ECOSE p-hydroxybenzoic acid efflux pump subunit AaeB OS=Escherichia coli
(strain SE11) GN=aaeB PE=3 SV=1
Length = 655
Score = 40.0 bits (92), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 71/162 (43%), Gaps = 14/162 (8%)
Query: 408 ESLVFALKCSLSLGLAVILGLMYNKENGYWSGLTIAISFATNRQ---------ATFKVAN 458
+ + FA+K + ++ LA+ +G + E W+ LT AI A A
Sbjct: 9 QHIRFAVKLATAIVLALFVGFHFQLETPRWAVLTAAIVAAGPAFAAGGEPYSGAIRYRGF 68
Query: 459 ARAQGTAMGSVYGVICSFLLQKSVNFRFLPLLPWIIF----SSFLRHSRMYEEAGAISAV 514
R GT +G + G++ + ++ L W F SS +R Y A
Sbjct: 69 LRIIGTFIGCIAGLVIIIAMIRAPLLMILVCCIWAGFCTWISSLVRIENSYAWGLAGYTA 128
Query: 515 IGALLILGRKNYGTPSEFAIARITEASLGLICFIIVEILFQP 556
+ ++ + + TP +FA+ R +E +G++C I+ ++LF P
Sbjct: 129 LIIVITIQPEPLLTP-QFAVERCSEIVIGIVCAIMADLLFSP 169
>sp|B7NDL8|AAEB_ECOLU p-hydroxybenzoic acid efflux pump subunit AaeB OS=Escherichia coli
O17:K52:H18 (strain UMN026 / ExPEC) GN=aaeB PE=3 SV=1
Length = 655
Score = 40.0 bits (92), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 71/162 (43%), Gaps = 14/162 (8%)
Query: 408 ESLVFALKCSLSLGLAVILGLMYNKENGYWSGLTIAISFATNRQ---------ATFKVAN 458
+ + FA+K + ++ LA+ +G + E W+ LT AI A A
Sbjct: 9 QHIRFAVKLATAIVLALFVGFHFQLETPRWAVLTAAIVAAGPAFAAGGEPYSGAIRYRGF 68
Query: 459 ARAQGTAMGSVYGVICSFLLQKSVNFRFLPLLPWIIF----SSFLRHSRMYEEAGAISAV 514
R GT +G + G++ + ++ L W F SS +R Y A
Sbjct: 69 LRIIGTFIGCIAGLVIIIAMIRAPLLMILVCCIWAGFCTWISSLVRIENSYAWGLAGYTA 128
Query: 515 IGALLILGRKNYGTPSEFAIARITEASLGLICFIIVEILFQP 556
+ ++ + + TP +FA+ R +E +G++C I+ ++LF P
Sbjct: 129 LIIVITIQPEPLLTP-QFAVERCSEIVIGIVCAIMADLLFSP 169
>sp|B1IQN9|AAEB_ECOLC p-hydroxybenzoic acid efflux pump subunit AaeB OS=Escherichia coli
(strain ATCC 8739 / DSM 1576 / Crooks) GN=aaeB PE=3 SV=1
Length = 655
Score = 40.0 bits (92), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 71/162 (43%), Gaps = 14/162 (8%)
Query: 408 ESLVFALKCSLSLGLAVILGLMYNKENGYWSGLTIAISFATNRQ---------ATFKVAN 458
+ + FA+K + ++ LA+ +G + E W+ LT AI A A
Sbjct: 9 QHIRFAVKLATAIVLALFVGFHFQLETPRWAVLTAAIVAAGPAFAAGGEPYSGAIRYRGF 68
Query: 459 ARAQGTAMGSVYGVICSFLLQKSVNFRFLPLLPWIIF----SSFLRHSRMYEEAGAISAV 514
R GT +G + G++ + ++ L W F SS +R Y A
Sbjct: 69 LRIIGTFIGCIAGLVIIIAMIRAPLLMILVCCIWAGFCTWISSLVRIENSYAWGLAGYTA 128
Query: 515 IGALLILGRKNYGTPSEFAIARITEASLGLICFIIVEILFQP 556
+ ++ + + TP +FA+ R +E +G++C I+ ++LF P
Sbjct: 129 LIIVITIQPEPLLTP-QFAVERCSEIVIGIVCAIMADLLFSP 169
>sp|B7M0V2|AAEB_ECO8A p-hydroxybenzoic acid efflux pump subunit AaeB OS=Escherichia coli
O8 (strain IAI1) GN=aaeB PE=3 SV=1
Length = 655
Score = 40.0 bits (92), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 71/162 (43%), Gaps = 14/162 (8%)
Query: 408 ESLVFALKCSLSLGLAVILGLMYNKENGYWSGLTIAISFATNRQ---------ATFKVAN 458
+ + FA+K + ++ LA+ +G + E W+ LT AI A A
Sbjct: 9 QHIRFAVKLATAIVLALFVGFHFQLETPRWAVLTAAIVAAGPAFAAGGEPYSGAIRYRGF 68
Query: 459 ARAQGTAMGSVYGVICSFLLQKSVNFRFLPLLPWIIF----SSFLRHSRMYEEAGAISAV 514
R GT +G + G++ + ++ L W F SS +R Y A
Sbjct: 69 LRIIGTFIGCIAGLVIIIAMIRAPLLMILVCCIWAGFCTWISSLVRIENSYAWGLAGYTA 128
Query: 515 IGALLILGRKNYGTPSEFAIARITEASLGLICFIIVEILFQP 556
+ ++ + + TP +FA+ R +E +G++C I+ ++LF P
Sbjct: 129 LIIVITIQPEPLLTP-QFAVERCSEIVIGIVCAIMADLLFSP 169
>sp|B7LHU8|AAEB_ECO55 p-hydroxybenzoic acid efflux pump subunit AaeB OS=Escherichia coli
(strain 55989 / EAEC) GN=aaeB PE=3 SV=1
Length = 655
Score = 40.0 bits (92), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 71/162 (43%), Gaps = 14/162 (8%)
Query: 408 ESLVFALKCSLSLGLAVILGLMYNKENGYWSGLTIAISFATNRQ---------ATFKVAN 458
+ + FA+K + ++ LA+ +G + E W+ LT AI A A
Sbjct: 9 QHIRFAVKLATAIVLALFVGFHFQLETPRWAVLTAAIVAAGPAFAAGGEPYSGAIRYRGF 68
Query: 459 ARAQGTAMGSVYGVICSFLLQKSVNFRFLPLLPWIIF----SSFLRHSRMYEEAGAISAV 514
R GT +G + G++ + ++ L W F SS +R Y A
Sbjct: 69 LRIIGTFIGCIAGLVIIIAMIRAPLLMILVCCIWAGFCTWISSLVRIENSYAWGLAGYTA 128
Query: 515 IGALLILGRKNYGTPSEFAIARITEASLGLICFIIVEILFQP 556
+ ++ + + TP +FA+ R +E +G++C I+ ++LF P
Sbjct: 129 LIIVITIQPEPLLTP-QFAVERCSEIVIGIVCAIMADLLFSP 169
>sp|A7ZSD4|AAEB_ECO24 p-hydroxybenzoic acid efflux pump subunit AaeB OS=Escherichia coli
O139:H28 (strain E24377A / ETEC) GN=aaeB PE=3 SV=1
Length = 655
Score = 40.0 bits (92), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 71/162 (43%), Gaps = 14/162 (8%)
Query: 408 ESLVFALKCSLSLGLAVILGLMYNKENGYWSGLTIAISFATNRQ---------ATFKVAN 458
+ + FA+K + ++ LA+ +G + E W+ LT AI A A
Sbjct: 9 QHIRFAVKLATAIVLALFVGFHFQLETPRWAVLTAAIVAAGPAFAAGGEPYSGAIRYRGF 68
Query: 459 ARAQGTAMGSVYGVICSFLLQKSVNFRFLPLLPWIIF----SSFLRHSRMYEEAGAISAV 514
R GT +G + G++ + ++ L W F SS +R Y A
Sbjct: 69 LRIIGTFIGCIAGLVIIIAMIRAPLLMILVCCIWAGFCTWISSLVRIENSYAWGLAGYTA 128
Query: 515 IGALLILGRKNYGTPSEFAIARITEASLGLICFIIVEILFQP 556
+ ++ + + TP +FA+ R +E +G++C I+ ++LF P
Sbjct: 129 LIIVITIQPEPLLTP-QFAVERCSEIVIGIVCAIMADLLFSP 169
>sp|Q32B99|AAEB_SHIDS p-hydroxybenzoic acid efflux pump subunit AaeB OS=Shigella
dysenteriae serotype 1 (strain Sd197) GN=aaeB PE=3 SV=1
Length = 655
Score = 40.0 bits (92), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 71/162 (43%), Gaps = 14/162 (8%)
Query: 408 ESLVFALKCSLSLGLAVILGLMYNKENGYWSGLTIAISFATNRQ---------ATFKVAN 458
+ + FA+K + ++ LA+ +G + E W+ LT AI A A
Sbjct: 9 QHIRFAVKLATAIVLALFVGFHFQLETPRWAVLTAAIVAAGPAFAAGGEPYSGAIRYRGF 68
Query: 459 ARAQGTAMGSVYGVICSFLLQKSVNFRFLPLLPWIIF----SSFLRHSRMYEEAGAISAV 514
R GT +G + G++ + ++ L W F SS +R Y A
Sbjct: 69 LRIIGTFIGCIAGLVIIIAMIRAPLLMILVCCIWAGFCTWISSLVRIENSYAWGLAGYTA 128
Query: 515 IGALLILGRKNYGTPSEFAIARITEASLGLICFIIVEILFQP 556
+ ++ + + TP +FA+ R +E +G++C I+ ++LF P
Sbjct: 129 LIIVITIQPEPLLTP-QFAVERCSEIVIGIVCAIMADLLFSP 169
>sp|B2U1U5|AAEB_SHIB3 p-hydroxybenzoic acid efflux pump subunit AaeB OS=Shigella boydii
serotype 18 (strain CDC 3083-94 / BS512) GN=aaeB PE=3
SV=1
Length = 655
Score = 40.0 bits (92), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 71/162 (43%), Gaps = 14/162 (8%)
Query: 408 ESLVFALKCSLSLGLAVILGLMYNKENGYWSGLTIAISFATNRQ---------ATFKVAN 458
+ + FA+K + ++ LA+ +G + E W+ LT AI A A
Sbjct: 9 QHIRFAVKLATAIVLALFVGFHFQLETPRWAVLTAAIVAAGPAFAAGGEPYSGAIRYRGF 68
Query: 459 ARAQGTAMGSVYGVICSFLLQKSVNFRFLPLLPWIIF----SSFLRHSRMYEEAGAISAV 514
R GT +G + G++ + ++ L W F SS +R Y A
Sbjct: 69 LRIIGTFIGCIAGLVIIIAMIRAPLLMILVCCIWAGFCTWISSLVRIENSYAWGLAGYTA 128
Query: 515 IGALLILGRKNYGTPSEFAIARITEASLGLICFIIVEILFQP 556
+ ++ + + TP +FA+ R +E +G++C I+ ++LF P
Sbjct: 129 LIIVITIQPEPLLTP-QFAVERCSEIVIGIVCAIMADLLFSP 169
>sp|P46481|AAEB_ECOLI p-hydroxybenzoic acid efflux pump subunit AaeB OS=Escherichia coli
(strain K12) GN=aaeB PE=1 SV=1
Length = 655
Score = 40.0 bits (92), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 71/162 (43%), Gaps = 14/162 (8%)
Query: 408 ESLVFALKCSLSLGLAVILGLMYNKENGYWSGLTIAISFATNRQ---------ATFKVAN 458
+ + FA+K + ++ LA+ +G + E W+ LT AI A A
Sbjct: 9 QHIRFAVKLATAIVLALFVGFHFQLETPRWAVLTAAIVAAGTAFAAGGEPYSGAIRYRGF 68
Query: 459 ARAQGTAMGSVYGVICSFLLQKSVNFRFLPLLPWIIF----SSFLRHSRMYEEAGAISAV 514
R GT +G + G++ + ++ L W F SS +R Y A
Sbjct: 69 LRIIGTFIGCIAGLVIIIAMIRAPLLMILVCCIWAGFCTWISSLVRIENSYAWGLAGYTA 128
Query: 515 IGALLILGRKNYGTPSEFAIARITEASLGLICFIIVEILFQP 556
+ ++ + + TP +FA+ R +E +G++C I+ ++LF P
Sbjct: 129 LIIVITIQPEPLLTP-QFAVERCSEIVIGIVCAIMADLLFSP 169
>sp|C4ZSX8|AAEB_ECOBW p-hydroxybenzoic acid efflux pump subunit AaeB OS=Escherichia coli
(strain K12 / MC4100 / BW2952) GN=aaeB PE=3 SV=1
Length = 655
Score = 40.0 bits (92), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 71/162 (43%), Gaps = 14/162 (8%)
Query: 408 ESLVFALKCSLSLGLAVILGLMYNKENGYWSGLTIAISFATNRQ---------ATFKVAN 458
+ + FA+K + ++ LA+ +G + E W+ LT AI A A
Sbjct: 9 QHIRFAVKLATAIVLALFVGFHFQLETPRWAVLTAAIVAAGPAFAAGGEPYSGAIRYRGF 68
Query: 459 ARAQGTAMGSVYGVICSFLLQKSVNFRFLPLLPWIIF----SSFLRHSRMYEEAGAISAV 514
R GT +G + G++ + ++ L W F SS +R Y A
Sbjct: 69 LRIIGTFIGCIAGLVIIIAMIRAPLLMILVCCIWAGFCTWISSLVRIENSYAWGLAGYTA 128
Query: 515 IGALLILGRKNYGTPSEFAIARITEASLGLICFIIVEILFQP 556
+ ++ + + TP +FA+ R +E +G++C I+ ++LF P
Sbjct: 129 LIIVITIQPEPLLTP-QFAVERCSEIVIGIVCAIMADLLFSP 169
>sp|Q1R699|AAEB_ECOUT p-hydroxybenzoic acid efflux pump subunit AaeB OS=Escherichia coli
(strain UTI89 / UPEC) GN=aaeB PE=3 SV=1
Length = 655
Score = 40.0 bits (92), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 71/162 (43%), Gaps = 14/162 (8%)
Query: 408 ESLVFALKCSLSLGLAVILGLMYNKENGYWSGLTIAISFATNRQ---------ATFKVAN 458
+ + FA+K + ++ LA+ +G + E W+ LT AI A A
Sbjct: 9 QHIRFAVKLATAIVLALFVGFHFQLETPRWAVLTAAIVAAGPAFAAGGEPYSGAIRYRGF 68
Query: 459 ARAQGTAMGSVYGVICSFLLQKSVNFRFLPLLPWIIF----SSFLRHSRMYEEAGAISAV 514
R GT +G + G++ + ++ L W F SS +R Y A
Sbjct: 69 LRIIGTFIGCIAGLVIIIAMIRAPLLMILVCCIWAGFCTWISSLVRIENSYAWGLAGYTA 128
Query: 515 IGALLILGRKNYGTPSEFAIARITEASLGLICFIIVEILFQP 556
+ ++ + + TP +FA+ R +E +G++C I+ ++LF P
Sbjct: 129 LIIVITIQPEPLLTP-QFAVERCSEIVIGIVCAIMADLLFSP 169
>sp|B1LGK6|AAEB_ECOSM p-hydroxybenzoic acid efflux pump subunit AaeB OS=Escherichia coli
(strain SMS-3-5 / SECEC) GN=aaeB PE=3 SV=1
Length = 655
Score = 40.0 bits (92), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 71/162 (43%), Gaps = 14/162 (8%)
Query: 408 ESLVFALKCSLSLGLAVILGLMYNKENGYWSGLTIAISFATNRQ---------ATFKVAN 458
+ + FA+K + ++ LA+ +G + E W+ LT AI A A
Sbjct: 9 QHIRFAVKLATAIVLALFVGFHFQLETPRWAVLTAAIVAAGPAFAAGGEPYSGAIRYRGF 68
Query: 459 ARAQGTAMGSVYGVICSFLLQKSVNFRFLPLLPWIIF----SSFLRHSRMYEEAGAISAV 514
R GT +G + G++ + ++ L W F SS +R Y A
Sbjct: 69 LRIIGTFIGCIAGLVIIIAMIRAPLLMILVCCIWAGFCTWISSLVRIENSYAWGLAGYTA 128
Query: 515 IGALLILGRKNYGTPSEFAIARITEASLGLICFIIVEILFQP 556
+ ++ + + TP +FA+ R +E +G++C I+ ++LF P
Sbjct: 129 LIIVITIQPEPLLTP-QFAVERCSEIVIGIVCAIMADLLFSP 169
>sp|A1AGD3|AAEB_ECOK1 p-hydroxybenzoic acid efflux pump subunit AaeB OS=Escherichia coli
O1:K1 / APEC GN=aaeB PE=3 SV=1
Length = 655
Score = 40.0 bits (92), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 71/162 (43%), Gaps = 14/162 (8%)
Query: 408 ESLVFALKCSLSLGLAVILGLMYNKENGYWSGLTIAISFATNRQ---------ATFKVAN 458
+ + FA+K + ++ LA+ +G + E W+ LT AI A A
Sbjct: 9 QHIRFAVKLATAIVLALFVGFHFQLETPRWAVLTAAIVAAGPAFAAGGEPYSGAIRYRGF 68
Query: 459 ARAQGTAMGSVYGVICSFLLQKSVNFRFLPLLPWIIF----SSFLRHSRMYEEAGAISAV 514
R GT +G + G++ + ++ L W F SS +R Y A
Sbjct: 69 LRIIGTFIGCIAGLVIIIAMIRAPLLMILVCCIWAGFCTWISSLVRIENSYAWGLAGYTA 128
Query: 515 IGALLILGRKNYGTPSEFAIARITEASLGLICFIIVEILFQP 556
+ ++ + + TP +FA+ R +E +G++C I+ ++LF P
Sbjct: 129 LIIVITIQPEPLLTP-QFAVERCSEIVIGIVCAIMADLLFSP 169
>sp|B7N112|AAEB_ECO81 p-hydroxybenzoic acid efflux pump subunit AaeB OS=Escherichia coli
O81 (strain ED1a) GN=aaeB PE=3 SV=1
Length = 655
Score = 40.0 bits (92), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 71/162 (43%), Gaps = 14/162 (8%)
Query: 408 ESLVFALKCSLSLGLAVILGLMYNKENGYWSGLTIAISFATNRQ---------ATFKVAN 458
+ + FA+K + ++ LA+ +G + E W+ LT AI A A
Sbjct: 9 QHIRFAVKLATAIVLALFVGFHFQLETPRWAVLTAAIVAAGPAFAAGGEPYSGAIRYRGF 68
Query: 459 ARAQGTAMGSVYGVICSFLLQKSVNFRFLPLLPWIIF----SSFLRHSRMYEEAGAISAV 514
R GT +G + G++ + ++ L W F SS +R Y A
Sbjct: 69 LRIIGTFIGCIAGLVIIIAMIRAPLLMILVCCIWAGFCTWISSLVRIENSYAWGLAGYTA 128
Query: 515 IGALLILGRKNYGTPSEFAIARITEASLGLICFIIVEILFQP 556
+ ++ + + TP +FA+ R +E +G++C I+ ++LF P
Sbjct: 129 LIIVITIQPEPLLTP-QFAVERCSEIVIGIVCAIMADLLFSP 169
>sp|B7MC01|AAEB_ECO45 p-hydroxybenzoic acid efflux pump subunit AaeB OS=Escherichia coli
O45:K1 (strain S88 / ExPEC) GN=aaeB PE=3 SV=1
Length = 655
Score = 40.0 bits (92), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 71/162 (43%), Gaps = 14/162 (8%)
Query: 408 ESLVFALKCSLSLGLAVILGLMYNKENGYWSGLTIAISFATNRQ---------ATFKVAN 458
+ + FA+K + ++ LA+ +G + E W+ LT AI A A
Sbjct: 9 QHIRFAVKLATAIVLALFVGFHFQLETPRWAVLTAAIVAAGPAFAAGGEPYSGAIRYRGF 68
Query: 459 ARAQGTAMGSVYGVICSFLLQKSVNFRFLPLLPWIIF----SSFLRHSRMYEEAGAISAV 514
R GT +G + G++ + ++ L W F SS +R Y A
Sbjct: 69 LRIIGTFIGCIAGLVIIIAMIRAPLLMILVCCIWAGFCTWISSLVRIENSYAWGLAGYTA 128
Query: 515 IGALLILGRKNYGTPSEFAIARITEASLGLICFIIVEILFQP 556
+ ++ + + TP +FA+ R +E +G++C I+ ++LF P
Sbjct: 129 LIIVITIQPEPLLTP-QFAVERCSEIVIGIVCAIMADLLFSP 169
>sp|B7UJX2|AAEB_ECO27 p-hydroxybenzoic acid efflux pump subunit AaeB OS=Escherichia coli
O127:H6 (strain E2348/69 / EPEC) GN=aaeB PE=3 SV=1
Length = 655
Score = 40.0 bits (92), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 71/162 (43%), Gaps = 14/162 (8%)
Query: 408 ESLVFALKCSLSLGLAVILGLMYNKENGYWSGLTIAISFATNRQ---------ATFKVAN 458
+ + FA+K + ++ LA+ +G + E W+ LT AI A A
Sbjct: 9 QHIRFAVKLATAIVLALFVGFHFQLETPRWAVLTAAIVAAGPAFAAGGEPYSGAIRYRGF 68
Query: 459 ARAQGTAMGSVYGVICSFLLQKSVNFRFLPLLPWIIF----SSFLRHSRMYEEAGAISAV 514
R GT +G + G++ + ++ L W F SS +R Y A
Sbjct: 69 LRIIGTFIGCIAGLVIIIAMIRAPLLMILVCCIWAGFCTWISSLVRIENSYAWGLAGYTA 128
Query: 515 IGALLILGRKNYGTPSEFAIARITEASLGLICFIIVEILFQP 556
+ ++ + + TP +FA+ R +E +G++C I+ ++LF P
Sbjct: 129 LIIVITIQPEPLLTP-QFAVERCSEIVIGIVCAIMADLLFSP 169
>sp|Q0TCM5|AAEB_ECOL5 p-hydroxybenzoic acid efflux pump subunit AaeB OS=Escherichia coli
O6:K15:H31 (strain 536 / UPEC) GN=aaeB PE=3 SV=1
Length = 655
Score = 40.0 bits (92), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 71/162 (43%), Gaps = 14/162 (8%)
Query: 408 ESLVFALKCSLSLGLAVILGLMYNKENGYWSGLTIAISFATNRQ---------ATFKVAN 458
+ + FA+K + ++ LA+ +G + E W+ LT AI A A
Sbjct: 9 QHIRFAVKLATAIVLALFVGFHFQLETPRWAVLTAAIVAAGPAFAAGGEPYSGAIRYRGF 68
Query: 459 ARAQGTAMGSVYGVICSFLLQKSVNFRFLPLLPWIIF----SSFLRHSRMYEEAGAISAV 514
R GT +G + G++ + ++ L W F SS +R Y A
Sbjct: 69 LRIIGTFIGCIAGLVIIIAMIRAPLLMILVCCIWAGFCTWISSLVRIENSYAWGLAGYTA 128
Query: 515 IGALLILGRKNYGTPSEFAIARITEASLGLICFIIVEILFQP 556
+ ++ + + TP +FA+ R +E +G++C I+ ++LF P
Sbjct: 129 LIIVITIQPEPLLTP-QFAVERCSEIVIGIVCAIMADLLFSP 169
>sp|B7NLF8|AAEB_ECO7I p-hydroxybenzoic acid efflux pump subunit AaeB OS=Escherichia coli
O7:K1 (strain IAI39 / ExPEC) GN=aaeB PE=3 SV=1
Length = 655
Score = 40.0 bits (92), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 71/162 (43%), Gaps = 14/162 (8%)
Query: 408 ESLVFALKCSLSLGLAVILGLMYNKENGYWSGLTIAISFATNRQ---------ATFKVAN 458
+ + FA+K + ++ LA+ +G + E W+ LT AI A A
Sbjct: 9 QHIRFAVKLATAIVLALFVGFHFQLETPRWAVLTAAIVAAGPAFAAGGEPYSGAIRYRGF 68
Query: 459 ARAQGTAMGSVYGVICSFLLQKSVNFRFLPLLPWIIF----SSFLRHSRMYEEAGAISAV 514
R GT +G + G++ + ++ L W F SS +R Y A
Sbjct: 69 LRIIGTFIGCIAGLVIIIAMIRAPLLMILVCCIWAGFCTWISSLVRIENSYAWGLAGYTA 128
Query: 515 IGALLILGRKNYGTPSEFAIARITEASLGLICFIIVEILFQP 556
+ ++ + + TP +FA+ R +E +G++C I+ ++LF P
Sbjct: 129 LIIVITIQPEPLLTP-QFAVERCSEIVIGIVCAIMADLLFSP 169
>sp|A8A549|AAEB_ECOHS p-hydroxybenzoic acid efflux pump subunit AaeB OS=Escherichia coli
O9:H4 (strain HS) GN=aaeB PE=3 SV=1
Length = 655
Score = 38.9 bits (89), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 70/162 (43%), Gaps = 14/162 (8%)
Query: 408 ESLVFALKCSLSLGLAVILGLMYNKENGYWSGLTIAISFATNRQ---------ATFKVAN 458
+ + FA+K + ++ LA+ +G + E W+ LT AI A A
Sbjct: 9 QHIRFAVKLATAIVLALFVGFHFQLETPRWAVLTAAIVAAGPAFAAGGEPYSGAIRYRGF 68
Query: 459 ARAQGTAMGSVYGVICSFLLQKSVNFRFLPLLPWIIF----SSFLRHSRMYEEAGAISAV 514
R GT +G + G++ + + L W F SS +R Y A
Sbjct: 69 LRIIGTFIGCIAGLVIIIAMIHAPLLMILVCCIWAGFCTWISSLVRIENSYAWGLAGYTA 128
Query: 515 IGALLILGRKNYGTPSEFAIARITEASLGLICFIIVEILFQP 556
+ ++ + + TP +FA+ R +E +G++C I+ ++LF P
Sbjct: 129 LIIVITIQPEPLLTP-QFAVERCSEIVIGIVCAIMADLLFSP 169
>sp|O23086|ALMTA_ARATH Aluminum-activated malate transporter 10 OS=Arabidopsis thaliana
GN=ALMT10 PE=3 SV=2
Length = 497
Score = 38.9 bits (89), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 64/296 (21%), Positives = 116/296 (39%), Gaps = 41/296 (13%)
Query: 410 LVFALKCSLSLGLAVILGLM---YNK--ENGYWSGLTIAISFATNRQATFKVANARAQGT 464
+V LK L+L L I M Y+ N W+ +T+ + F +N ATF R T
Sbjct: 67 VVHCLKVGLALSLVSIFYYMRPLYDGVGGNAMWAIMTVVVVFESNVGATFCKCVNRVVAT 126
Query: 465 AMGSVYGVICSFLLQKSVNFR-FLPLLPWIIFSSFLRHSRM-------YEEAGAISAVIG 516
+ G+ ++ +S F+ +F+ +SR ++ I +
Sbjct: 127 ILAGSLGIAVHWVATQSGKAEVFVIGCSVFLFAFAATYSRFVPSFKARFDYGAMIFILTF 186
Query: 517 ALLILGRKNYGTPSEFAIARITEASLGLICFIIVEILFQPARAATLAKAQLAQSLQALQD 576
+L+ +G E A R++ ++G II+ + F P A + + ++L+ L D
Sbjct: 187 SLVSVGGYRVDKLVELAQQRVSTIAIGTSICIIITVFFCPIWAGSQLHRLIERNLEKLAD 246
Query: 577 GIKDIVLFADQKGKATPTALRDKQKRLKSH-----INE--------LDKFIAEAEMEPNF 623
+ V ++ + + D+ +K +N L +F + + N
Sbjct: 247 SLDGCVAEYFKENEVSTNRNEDENTNMKLQGFKCVLNSKGTEEAMPLIRFSGFSFSQANL 306
Query: 624 --WFLPFHGS--------CYENILASLSRMA----DLLLFVAYKTEFLSQLSERFG 665
W P HGS Y I A++ R A +L + + Y+TE Q+ FG
Sbjct: 307 ARW-EPAHGSFNFRHPWKLYVKIGAAMRRCAYCLENLSICINYETEAPDQVKNHFG 361
>sp|B7LRL5|AAEB_ESCF3 p-hydroxybenzoic acid efflux pump subunit AaeB OS=Escherichia
fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73)
GN=aaeB PE=3 SV=1
Length = 655
Score = 37.4 bits (85), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 71/162 (43%), Gaps = 14/162 (8%)
Query: 408 ESLVFALKCSLSLGLAVILGLMYNKENGYWSGLTIAISFATNRQATFKVANA-------- 459
+ + FA+K + ++ L + +G + E W+ LT AI A A A
Sbjct: 9 QHIRFAVKLASAIVLTLFVGFHFQLETPRWAVLTAAIVAAGPAFAAGGEPYAGAIRYRGM 68
Query: 460 -RAQGTAMGSVYGVICSFLLQKSVNFRFLPLLPWIIF----SSFLRHSRMYEEAGAISAV 514
R GT +G + G++ + ++ L W F SS +R Y A
Sbjct: 69 LRIIGTFIGCIAGLVIIIAMIRAPLLMILVCCIWAGFCTWISSLVRVENSYAWGLAGYTA 128
Query: 515 IGALLILGRKNYGTPSEFAIARITEASLGLICFIIVEILFQP 556
+ ++ + + TP +FA+ R +E +G++C I+ +++F P
Sbjct: 129 LIIVITIQPEPLLTP-QFALERCSEIVVGIVCAIVADLIFSP 169
>sp|D5CDA0|AAEB_ENTCC p-hydroxybenzoic acid efflux pump subunit AaeB OS=Enterobacter
cloacae subsp. cloacae (strain ATCC 13047 / DSM 30054 /
NBRC 13535 / NCDC 279-56) GN=aaeB PE=3 SV=1
Length = 655
Score = 37.4 bits (85), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 71/160 (44%), Gaps = 18/160 (11%)
Query: 412 FALKCSLSLGLAVILGLMYNKENGYWSGLTIAISFATNRQ---------ATFKVANARAQ 462
FA+K + ++ LA+ +G + E W+ LT AI A A R
Sbjct: 13 FAVKLASAIVLALFVGFHFQLETPRWAVLTAAIVAAGPAFAAGGEPYSGAIRYRGMLRII 72
Query: 463 GTAMGSVYGVICSFLLQKSVNFRFLPLLPWIIFSSFL------RHSRMYEEAGAISAVIG 516
GT +G + + L+ ++ L W F ++L +S + AG + +I
Sbjct: 73 GTFIGCIAALTIIILMIRTPLLMVLVCCIWAGFCTWLSSLVKVENSYAWGLAGYTALII- 131
Query: 517 ALLILGRKNYGTPSEFAIARITEASLGLICFIIVEILFQP 556
++ + + P +FA+ R +E +G++C I+ ++LF P
Sbjct: 132 -VITIQTEPLLAP-QFAVERCSEIVIGIVCAIVADLLFSP 169
>sp|Q10495|YDG8_SCHPO Uncharacterized protein C26F1.08c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC26F1.08c PE=4 SV=1
Length = 977
Score = 36.6 bits (83), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 56/270 (20%), Positives = 111/270 (41%), Gaps = 28/270 (10%)
Query: 412 FALKCSLSLGLAVILGLM------YNKENGYWSGLTIAISFATNRQATFKVANARAQGTA 465
+ LK ++ +GL I+ Y NG WS ++ T +V R GT
Sbjct: 583 YGLKMAIGIGLLSIVAFQKSTAARYTLWNGQWSLISTLFVLEVTVSTTLRVGLFRTLGTL 642
Query: 466 MGSVYGVICSFLLQKSVNFRFLPL---LPWIIFSSFLRHSRMYEEAGAISAVIGALLILG 522
G+VY ++ + + ++ L + W+ S +++++ Y + + ++ G
Sbjct: 643 SGAVYAY-AAWEVSQGWSYAIATLTFAISWV--SCYVKYNTEYSGIATVFNITFPPILYG 699
Query: 523 ---RKNYGTPSEFAIARITEASLGLICFIIVEILFQPARAATLAKAQLAQ-SLQALQD-- 576
+ + +P A R ++G+ I+V I+ P A + K +L Q SL +L+
Sbjct: 700 SYLKTSTISPFHLACIRFIVVNVGIGMAIVVNIVVFPYLARRVLKYKLGQASLLSLKQYT 759
Query: 577 GIKDIVLFADQKGKATPTALRDKQKRLKSHINELDKFIAEAEMEPNFWFLPFHGSCYENI 636
+ D +L + T +K++ S + K + ME N PF Y ++
Sbjct: 760 TLSDYLL--SRNLYTNLTICEGYKKQISSLLVTARKLLQLVNMEFNLKG-PFPVGIYNDL 816
Query: 637 LASLSRMADLLLFVAYKTEFLSQLSERFGV 666
+ L + L+ L+++ RFG+
Sbjct: 817 IIKLENLGIRLV-------VLNRVRSRFGL 839
>sp|B5BGR8|AAEB_SALPK p-hydroxybenzoic acid efflux pump subunit AaeB OS=Salmonella
paratyphi A (strain AKU_12601) GN=aaeB PE=3 SV=1
Length = 655
Score = 36.6 bits (83), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 70/160 (43%), Gaps = 18/160 (11%)
Query: 412 FALKCSLSLGLAVILGLMYNKENGYWSGLTIAISFATNRQ---------ATFKVANARAQ 462
FA+K + ++ LA+ +G + E W+ LT AI A A R
Sbjct: 13 FAVKLACAIVLALFIGFHFQLETPRWAVLTAAIVAAGPAFAAGGEPYSGAIRYRGMLRII 72
Query: 463 GTAMGSVYGVICSFLLQKSVNFRFLPLLPWIIF----SSFLRHSRMYEEAGAISAVIGAL 518
GT +G + +I + ++ L W+ F SS +R Y A +S +
Sbjct: 73 GTFIGCIAALIIIISMIRAPLLMILVCCVWVGFCTWISSLVRIENSY--AWGLSGYTALI 130
Query: 519 LILGRKN--YGTPSEFAIARITEASLGLICFIIVEILFQP 556
+++ + TP +FA+ R +E +G+ C I+ ++LF P
Sbjct: 131 IVITIQTEPLLTP-QFALERCSEIVIGIGCAILADLLFSP 169
>sp|Q5PJT9|AAEB_SALPA p-hydroxybenzoic acid efflux pump subunit AaeB OS=Salmonella
paratyphi A (strain ATCC 9150 / SARB42) GN=aaeB PE=3
SV=1
Length = 655
Score = 36.6 bits (83), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 70/160 (43%), Gaps = 18/160 (11%)
Query: 412 FALKCSLSLGLAVILGLMYNKENGYWSGLTIAISFATNRQ---------ATFKVANARAQ 462
FA+K + ++ LA+ +G + E W+ LT AI A A R
Sbjct: 13 FAVKLACAIVLALFIGFHFQLETPRWAVLTAAIVAAGPAFAAGGEPYSGAIRYRGMLRII 72
Query: 463 GTAMGSVYGVICSFLLQKSVNFRFLPLLPWIIF----SSFLRHSRMYEEAGAISAVIGAL 518
GT +G + +I + ++ L W+ F SS +R Y A +S +
Sbjct: 73 GTFIGCIAALIIIISMIRAPLLMILVCCVWVGFCTWISSLVRIENSY--AWGLSGYTALI 130
Query: 519 LILGRKN--YGTPSEFAIARITEASLGLICFIIVEILFQP 556
+++ + TP +FA+ R +E +G+ C I+ ++LF P
Sbjct: 131 IVITIQTEPLLTP-QFALERCSEIVIGIGCAILADLLFSP 169
>sp|A9CPT4|TDRD1_ORYLA Tudor domain-containing protein 1 OS=Oryzias latipes GN=tdrd1 PE=2
SV=1
Length = 1133
Score = 36.6 bits (83), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 68/165 (41%), Gaps = 37/165 (22%)
Query: 661 SERFGVSWK-QIQEPINDDLELFKEKVGHSLKCFEEVILIKSLAVLAPERQNRNISHDV- 718
+E F V W Q+Q+ +L V +++ F+ + SLA L PER RN++ +
Sbjct: 974 NEHFPVEWPPQVQQVFRSELL----NVMATVQSFDGSANVLSLA-LPPERGGRNLAAVIQ 1028
Query: 719 -------------ESGRLPNEDVPR---------TLSPDEEEIEEILSSFLQHSKEVANS 756
++ + P D T SPDE E + + V N+
Sbjct: 1029 EMLHVHRKGSPLPDASQTPGSDATEPSCIKLGSTTASPDEPE------DAAEPADAVTNT 1082
Query: 757 INGYDGEEKHLSQTVLV--LNGLGFCISSLMKETTKIEKEIKELI 799
E+K + Q V L G G C SL K+ ++EK ++ L+
Sbjct: 1083 QESTPQEQKEMDQATSVHDLQGPGCCCQSLKKQMDRLEKMVQLLL 1127
>sp|Q73S87|Y4189_MYCPA Putative S-adenosyl-L-methionine-dependent methyltransferase
MAP_4189c OS=Mycobacterium paratuberculosis (strain ATCC
BAA-968 / K-10) GN=MAP_4189c PE=3 SV=1
Length = 304
Score = 36.2 bits (82), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 7/89 (7%)
Query: 702 LAVLAPERQNR---NISHDVESGR-LPNEDVPRTLSPDEEEIEEILSSFLQHSKEVANSI 757
L L PE Q+R NI+ G + E VP + D E + E+ SF QH ++ +
Sbjct: 187 LIYLPPEAQDRLFDNITALSAPGSTIATEFVPGIVDFDAERVREMSGSFRQHGVDIDMAS 246
Query: 758 NGYDGEEKHLSQTVLVLNGLGFCISSLMK 786
Y GE H+ + LNGLG+ + +
Sbjct: 247 LVYAGERNHV---IDYLNGLGWRAEGVTR 272
>sp|A8AQD4|AAEB_CITK8 p-hydroxybenzoic acid efflux pump subunit AaeB OS=Citrobacter
koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696)
GN=aaeB PE=3 SV=1
Length = 655
Score = 35.4 bits (80), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 69/162 (42%), Gaps = 14/162 (8%)
Query: 408 ESLVFALKCSLSLGLAVILGLMYNKENGYWSGLTIAISFATNRQ---------ATFKVAN 458
+ + FA+K + ++ LA+ +G + E W+ LT AI A A
Sbjct: 9 QHIRFAVKLACAIVLALFVGFHFQLETPRWAVLTAAIVAAGPAFAAGGEPYSGAIRYRGM 68
Query: 459 ARAQGTAMGSVYGVICSFLLQKSVNFRFLPLLPWIIF----SSFLRHSRMYEEAGAISAV 514
R GT +G + + + ++ L W F SS +R Y +
Sbjct: 69 LRIIGTFIGCIAALTIIITMIRAPLLMILVCCIWAGFCTWISSLVRVENSYAWGLSGYTA 128
Query: 515 IGALLILGRKNYGTPSEFAIARITEASLGLICFIIVEILFQP 556
+ ++ + + TP +FA+ R +E +G++C I+ ++LF P
Sbjct: 129 LIIVITIQAEPLLTP-QFAVERCSEIVIGIVCAIMADLLFSP 169
>sp|Q2SWB9|RIMO_BURTA Ribosomal protein S12 methylthiotransferase RimO OS=Burkholderia
thailandensis (strain E264 / ATCC 700388 / DSM 13276 /
CIP 106301) GN=rimO PE=3 SV=1
Length = 463
Score = 35.4 bits (80), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 84/185 (45%), Gaps = 26/185 (14%)
Query: 72 GCWHALYATIQIMIPSILCLWLVGPDRFTADVAAVVVTLMSFV-VALPESTALMAKRIAF 130
GC AL + QI+ + + AD+ VVV F+ A+ ES + + +A
Sbjct: 23 GCPKALVDSEQIITQLRAEGYEISGTYDGADL--VVVNTCGFIDEAVQESLDAIGEALAE 80
Query: 131 GQIVIV--CVGTVVHGAKTGIV--MHP--IHVASSTALGALASVVAMLLPYPRLAYHE-- 182
VIV C+G + +G++ +HP + V A+G + VV LP P + +
Sbjct: 81 NGKVIVTGCLGAKKSASGSGLIEEVHPKVLAVTGPHAVGEVMQVVHSHLPKPHDPFVDLV 140
Query: 183 ----VKKSSKLYAE-NASEMLNHFVKAFCAQDNTAALDSIS--------EAKSLFKAGAK 229
+K + + YA SE NH +FC + D +S EA++LFKAG K
Sbjct: 141 PAAGIKLTPRHYAYLKISEGCNHRC-SFCIIPSMRG-DLVSRPVAEVMLEAENLFKAGVK 198
Query: 230 QLLSI 234
+LL I
Sbjct: 199 ELLVI 203
>sp|Q13Z56|RIMO_BURXL Ribosomal protein S12 methylthiotransferase RimO OS=Burkholderia
xenovorans (strain LB400) GN=rimO PE=3 SV=1
Length = 461
Score = 35.4 bits (80), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 55/120 (45%), Gaps = 19/120 (15%)
Query: 133 IVIVCVGTVVHGAKTGIV--MHP--IHVASSTALGALASVVAMLLPYPRLAYHE------ 182
IV C+G + +G++ +HP + V ALG + V M LP P + +
Sbjct: 83 IVTGCLGAKKSASGSGLIEEVHPKVLAVTGPHALGEVMQHVHMHLPKPHDPFVDLVPAAG 142
Query: 183 VKKSSKLYAE-NASEMLNHFVKAFCAQDNTAA-------LDSISEAKSLFKAGAKQLLSI 234
VK + + YA SE NH FC + D + EA++LFK+G K+LL I
Sbjct: 143 VKLTPRHYAYLKISEGCNHRC-TFCIIPSMRGDLVSRPVADVMLEAENLFKSGVKELLVI 201
>sp|B3R4X7|RIMO_CUPTR Ribosomal protein S12 methylthiotransferase RimO OS=Cupriavidus
taiwanensis (strain R1 / LMG 19424) GN=rimO PE=3 SV=1
Length = 470
Score = 35.0 bits (79), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 80/185 (43%), Gaps = 26/185 (14%)
Query: 72 GCWHALYATIQIMIPSILCLWLVGPDRFTADVAAVVVTLMSFV-VALPESTALMAKRIAF 130
GC AL + QI+ + + AD+ VVV F+ A+ ES + + +
Sbjct: 34 GCPKALVDSEQIITQLRAEGYAISGTYDGADL--VVVNTCGFIDEAVQESLDAIGEALTE 91
Query: 131 GQIVIV--CVGTVVHGAKTGIV--MHP--IHVASSTALGALASVVAMLLPYPRLAYHE-- 182
VIV C+G A IV +HP + V ALG + V LP P + +
Sbjct: 92 NGKVIVTGCLGAKKDAAGHDIVSSVHPKVLAVTGPHALGEVMQAVHTHLPKPHDPFTDLV 151
Query: 183 ----VKKSSKLYAE-NASEMLNHFVKAFCAQDNTAALDSIS--------EAKSLFKAGAK 229
+K + K YA SE NH +FC + D +S EA++LFKAG K
Sbjct: 152 PAAGIKLTPKHYAYLKISEGCNHRC-SFCIIPSMRG-DLVSRPVAEVMLEAENLFKAGVK 209
Query: 230 QLLSI 234
+LL I
Sbjct: 210 ELLVI 214
>sp|Q472G1|RIMO_CUPPJ Ribosomal protein S12 methylthiotransferase RimO OS=Cupriavidus
pinatubonensis (strain JMP134 / LMG 1197) GN=rimO PE=3
SV=1
Length = 452
Score = 35.0 bits (79), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 80/185 (43%), Gaps = 26/185 (14%)
Query: 72 GCWHALYATIQIMIPSILCLWLVGPDRFTADVAAVVVTLMSFV-VALPESTALMAKRIAF 130
GC AL + QI+ + + AD+ VVV F+ A+ ES + + +
Sbjct: 16 GCPKALVDSEQIITQLRAEGYAISGTYDGADL--VVVNTCGFIDEAVQESLDAIGEALTE 73
Query: 131 GQIVIV--CVGTVVHGAKTGIV--MHP--IHVASSTALGALASVVAMLLPYPRLAYHE-- 182
VIV C+G A IV +HP + V ALG + V LP P + +
Sbjct: 74 NGKVIVTGCLGAKKDAAGHDIVSSVHPKVLAVTGPHALGEVMQAVHTHLPKPHDPFTDLV 133
Query: 183 ----VKKSSKLYAE-NASEMLNHFVKAFCAQDNTAALDSIS--------EAKSLFKAGAK 229
+K + K YA SE NH +FC + D +S EA++LFKAG K
Sbjct: 134 PAAGIKLTPKHYAYLKISEGCNHRC-SFCIIPSMRG-DLVSRPVAEVMLEAENLFKAGVK 191
Query: 230 QLLSI 234
+LL I
Sbjct: 192 ELLVI 196
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.134 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 282,062,541
Number of Sequences: 539616
Number of extensions: 11317586
Number of successful extensions: 32774
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 92
Number of HSP's that attempted gapping in prelim test: 32732
Number of HSP's gapped (non-prelim): 114
length of query: 823
length of database: 191,569,459
effective HSP length: 126
effective length of query: 697
effective length of database: 123,577,843
effective search space: 86133756571
effective search space used: 86133756571
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 66 (30.0 bits)