Your job contains 1 sequence.
>003405
MVHNAFDSLELISNCSPKIDAVASYGLKILLGCSDGSLKIYSPGSSESDRSPPSDYQSLR
KESYELERTISGFSKKPILSMEVLASRQLLLSLSESIAFHRLPNLETIAVLTKAKGANVY
SWDDRRGFLCFARQKRVCIFRHDGGRGFVEVKDFGVPDTVKSMSWCGENICIAIRKGYMI
LNATNGALSEVFPSGRIGPPLVVSLLSGELLLGKENIGVFVDQNGKLLQADRICWSEAPI
AVIIQKPYAIALLPRRVEVRSLRVPYALIQTIVLQNVRHLIPSSNAVVVALENSIFGLFP
VPLGAQIVQLTASGDFEEALALCKLLPPEDASLRAAKEGSIHIRFAHYLFDTGSYEEAME
HFLASQVDITYALSLYPSIVLPKTTVVPEPERLLDISSDAPSLSRGSSGMSDDMESSPPA
QLSELDENATLKSKKMSHNTLMALIKFLQKKRSSIIEKATAEGTEEVVLDAVGDNFTSHD
STRFKKSSKGRGTIPMYSGAREMAAILDTALLQALLLTGQSSAALELLKGLNYCDVKICE
EILQKKNHYTALLELYKSNARHREALKLLHELVEESKSNQSQDEHTQKFNPESIIEYLKP
LCGTDPMLVLEFSMLVLESCPTQTIELFLSGNIPADLVNSYLKQYSPSMQGRYLELMLAM
NENSISGNLQNEMVQIYLSEVLDWYSDLSAQQKWDEKAYSPTRKKLLSALESISGYNPEV
LLKRLPADALYEERAILLGKMNQHELALSLYVHKVFLINQPVFLLIRRMAMDIKPLVTEH
EIKHINWRVLQATIIKLFFSSLLRLMPSRSYIWKGFFVGTSHP
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 003405
(823 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2115355 - symbol:EMB2754 "EMBRYO DEFECTIVE 275... 2689 8.3e-280 1
MGI|MGI:2443189 - symbol:Vps39 "vacuolar protein sorting ... 431 3.2e-57 3
UNIPROTKB|Q96JC1 - symbol:VPS39 "Vam6/Vps39-like protein"... 428 1.5e-56 3
ZFIN|ZDB-GENE-080530-2 - symbol:vps39 "vacuolar protein s... 390 2.2e-56 3
UNIPROTKB|E9PT04 - symbol:Vps39 "Protein Vps39" species:1... 414 3.5e-56 3
UNIPROTKB|E2RRH8 - symbol:VPS39 "Uncharacterized protein"... 425 4.4e-56 3
UNIPROTKB|F1SFK5 - symbol:VPS39 "Uncharacterized protein"... 412 3.3e-55 3
UNIPROTKB|F1NID0 - symbol:VPS39 "Uncharacterized protein"... 396 1.1e-54 3
UNIPROTKB|E1BM41 - symbol:VPS39 "Uncharacterized protein"... 410 1.2e-54 3
UNIPROTKB|E2RG39 - symbol:VPS39 "Uncharacterized protein"... 411 1.8e-54 3
UNIPROTKB|E1BX81 - symbol:VPS39 "Uncharacterized protein"... 385 2.1e-53 3
DICTYBASE|DDB_G0279169 - symbol:vps39 "citron-like domain... 290 2.2e-42 2
RGD|1304858 - symbol:Vps39 "vacuolar protein sorting 39 h... 414 3.5e-40 2
FB|FBgn0038593 - symbol:CG7146 species:7227 "Drosophila m... 230 5.7e-31 3
ASPGD|ASPL0000003032 - symbol:avaB species:162425 "Emeric... 235 3.2e-29 4
ZFIN|ZDB-GENE-070410-66 - symbol:tgfbrap1 "transforming g... 229 6.6e-24 2
UNIPROTKB|Q8WUH2 - symbol:TGFBRAP1 "Transforming growth f... 200 4.7e-23 2
UNIPROTKB|I3LIP2 - symbol:TGFBRAP1 "Uncharacterized prote... 190 1.4e-22 2
UNIPROTKB|F1MWF9 - symbol:TGFBRAP1 "Transforming growth f... 199 1.1e-21 2
MGI|MGI:2447427 - symbol:Tgfbrap1 "transforming growth fa... 207 3.3e-21 2
UNIPROTKB|A7MB11 - symbol:TGFBRAP1 "Transforming growth f... 191 8.0e-21 2
UNIPROTKB|F1P4R5 - symbol:TGFBRAP1 "Uncharacterized prote... 190 2.1e-20 2
UNIPROTKB|E2RKZ9 - symbol:TGFBRAP1 "Uncharacterized prote... 197 3.2e-20 2
RGD|1310772 - symbol:Tgfbrap1 "transforming growth factor... 199 4.0e-20 2
WB|WBGene00011625 - symbol:vps-39 species:6239 "Caenorhab... 162 4.4e-18 3
DICTYBASE|DDB_G0277663 - symbol:DDB_G0277663 "Transformin... 187 5.7e-16 4
POMBASE|SPAC23H4.14 - symbol:vam6 "guanyl-nucleotide exch... 164 2.4e-15 2
SGD|S000002235 - symbol:VAM6 "Vacuolar protein involved i... 127 0.00040 1
>TAIR|locus:2115355 [details] [associations]
symbol:EMB2754 "EMBRYO DEFECTIVE 2754" species:3702
"Arabidopsis thaliana" [GO:0005083 "small GTPase regulator
activity" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0009793 "embryo development ending in
seed dormancy" evidence=NAS] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0009506 "plasmodesma" evidence=IDA]
[GO:0006486 "protein glycosylation" evidence=RCA] [GO:0006487
"protein N-linked glycosylation" evidence=RCA] [GO:0006623 "protein
targeting to vacuole" evidence=RCA] [GO:0007033 "vacuole
organization" evidence=RCA] [GO:0042732 "D-xylose metabolic
process" evidence=RCA] InterPro:IPR000547 InterPro:IPR001180
Pfam:PF00637 Pfam:PF00780 PROSITE:PS50219 GO:GO:0009506
GO:GO:0006886 EMBL:CP002687 GO:GO:0016192 GO:GO:0005622
GO:GO:0005083 InterPro:IPR019453 Pfam:PF10367 InterPro:IPR019452
Pfam:PF10366 OMA:CLGPIKM EMBL:AY099879 IPI:IPI00546737
RefSeq:NP_195381.6 UniGene:At.44832 ProteinModelPortal:Q8L5Y0
PRIDE:Q8L5Y0 EnsemblPlants:AT4G36630.1 GeneID:829815
KEGG:ath:AT4G36630 TAIR:At4g36630 HOGENOM:HOG000083666
PhylomeDB:Q8L5Y0 ProtClustDB:CLSN2694231 Genevestigator:Q8L5Y0
Uniprot:Q8L5Y0
Length = 1000
Score = 2689 (951.6 bits), Expect = 8.3e-280, P = 8.3e-280
Identities = 516/755 (68%), Positives = 615/755 (81%)
Query: 1 MVHNAFDSLELISNCSPKIDAVASYGLKILLGCSDGSLKIYSPGSSESDRSPPSDYQSLR 60
MVHNA+DS +L+ +C +IDAV SYG K+ GC DGSL+IYSP ES S PS+ L
Sbjct: 1 MVHNAYDSFQLLKDCPARIDAVESYGSKLFAGCYDGSLRIYSP--PESSASDPSE---LH 55
Query: 61 KESYELERTISGFSKKPILSMEVLASRQLLLSLSESIAFHRLPNLETIAVLTKAKGANVY 120
+E+Y LE+T++GFSKKPI++MEVLASR+LLLSLSESIAFH LPNLET+AV+TKAKGAN Y
Sbjct: 56 QETYVLEKTVAGFSKKPIVAMEVLASRELLLSLSESIAFHGLPNLETVAVITKAKGANAY 115
Query: 121 SWDDRRGFLCFARQKRVCIFRHDGGRGFVEVKDFGVPDTVKSMSWCGENICIAIRKGYMI 180
SWDDRRGFLCF+RQKRVC+F+HDGG GFVEV+D+GVPDTVKS+SWCGENIC+ I+K Y+I
Sbjct: 116 SWDDRRGFLCFSRQKRVCVFKHDGGGGFVEVRDYGVPDTVKSISWCGENICLGIKKEYVI 175
Query: 181 LNATNGALSEVFPSGRIGXXXXXXXXXXXXXXXXXNIGVFVDQNGKLLQADRICWSEAPI 240
LN NG LSEVFPSGR+ NIGVFVDQNGKLLQ +RICWSEAP
Sbjct: 176 LNTANGTLSEVFPSGRVAPPLVISLPSGELILGKENIGVFVDQNGKLLQTERICWSEAPT 235
Query: 241 AVIIQKPYAIALLPRRVEVRSLRVPYALIQTIVLQNVRHLIPSSNAVVVALENSIFGLFP 300
+++IQ PYAIALLPRRVEVR LR PY LIQTIVLQN+R L+ S+NAV+V L+NS++ LFP
Sbjct: 236 SIVIQNPYAIALLPRRVEVRLLRSPYPLIQTIVLQNIRRLVKSNNAVIVGLDNSVYVLFP 295
Query: 301 VPLGAQIVQLTASGDFEEALALCKLLPPEDASLRAAKEGSIHIRFAHYLFDTGSYEEAME 360
V +GAQIVQLTASG+FEEALALCK+LPP+++SLRAAKE SIH RFAHYLF+ GSYEEAME
Sbjct: 296 VSIGAQIVQLTASGNFEEALALCKVLPPDESSLRAAKESSIHTRFAHYLFENGSYEEAME 355
Query: 361 HFLASQVDITYALSLYPSIVLPKTTVVPEPERLLDISSDAPXXXXXXXXXXXXXXXXPPA 420
HFLASQVDIT+ LS+YPSI+LPKTT++P+P++++DIS D P
Sbjct: 356 HFLASQVDITHVLSMYPSIILPKTTIIPQPDKMVDISGDEASLSRGSSGISDDMESSSPR 415
Query: 421 QLSELDENATLKSKKMSHNTLMALIKFLQKKRSSIIEKATAEGTEEVVLDAVGDNFTSHD 480
E ++NA L+SKKMSHNTLMALIK+L K+R ++IEKAT+EGTEEV+ DAVG + ++D
Sbjct: 416 YFLESEDNADLESKKMSHNTLMALIKYLLKRRPAVIEKATSEGTEEVISDAVGKTYGAND 475
Query: 481 STRFKKSSKGRGTIPMYSGAREMXXXXXXXXXXXXXXXXXXXXXXELLKGLNYCDVKICE 540
S++ KKSSKGRG IP+ SGAREM ELLKG+NY DVKICE
Sbjct: 476 SSKSKKSSKGRGMIPLNSGAREMAAILDTALLQALLHTGQSGAAIELLKGVNYSDVKICE 535
Query: 541 EILQKKNHYTALLELYKSNARHREALKLLHELVEESKSNQSQDEHTQKFNPESIIEYLKP 600
EIL K +Y+ALLEL+KSN+ H EALKLL++L +ESK+NQSQ + TQ F+PE IIEYLKP
Sbjct: 536 EILMKSKNYSALLELFKSNSMHHEALKLLNQLADESKTNQSQTDVTQIFSPELIIEYLKP 595
Query: 601 LCGTDPMLVLEFSMLVLESCPTQTIELFLSGNIPADLVNSYLKQYSPSMQGRYLELMLAM 660
LC TDPMLVLE+SMLVLESCPTQTI+LFLSGNI ADLVNSYLKQ++P+MQGRYLELM+AM
Sbjct: 596 LCRTDPMLVLEYSMLVLESCPTQTIDLFLSGNISADLVNSYLKQHAPNMQGRYLELMMAM 655
Query: 661 NENSISGNLQNEMVQIYLSEVLDWYSDLSAQQKWDEKAYSPTRKKLLSALESISGYNPEV 720
N+ ++SGNLQNEMVQIYLSEVLD Y+ SAQQKWDEK + P RKKLLSALESISGY+P+
Sbjct: 656 NDTAVSGNLQNEMVQIYLSEVLDLYAAKSAQQKWDEKDHPPERKKLLSALESISGYSPQP 715
Query: 721 LLKRLPADALYEERAILLGKMNQHELALSLYVHKV 755
LLKRLP DALYEERA++LGKMNQHELALS+YVHK+
Sbjct: 716 LLKRLPRDALYEERAVILGKMNQHELALSIYVHKL 750
>MGI|MGI:2443189 [details] [associations]
symbol:Vps39 "vacuolar protein sorting 39 (yeast)"
species:10090 "Mus musculus" [GO:0005083 "small GTPase regulator
activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005764 "lysosome"
evidence=IEA] [GO:0005768 "endosome" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0030897 "HOPS
complex" evidence=ISO] InterPro:IPR000547 InterPro:IPR001180
Pfam:PF00637 Pfam:PF00780 PROSITE:PS50219 MGI:MGI:2443189
GO:GO:0006886 GO:GO:0016192 GO:GO:0031902 GO:GO:0005765
GO:GO:0030897 GO:GO:0005083 CleanEx:MM_PLDN InterPro:IPR019453
Pfam:PF10367 InterPro:IPR019452 Pfam:PF10366
GeneTree:ENSGT00530000063596 eggNOG:NOG241434 CTD:23339
HOGENOM:HOG000046531 HOVERGEN:HBG056493 OMA:CLGPIKM EMBL:AF281050
EMBL:AF281051 EMBL:BC007479 IPI:IPI00154020 IPI:IPI00227698
RefSeq:NP_671495.1 RefSeq:NP_849182.1 UniGene:Mm.246131
ProteinModelPortal:Q8R5L3 IntAct:Q8R5L3 STRING:Q8R5L3
PhosphoSite:Q8R5L3 PaxDb:Q8R5L3 PRIDE:Q8R5L3
Ensembl:ENSMUST00000028752 Ensembl:ENSMUST00000102501 GeneID:269338
KEGG:mmu:269338 InParanoid:Q8R5L3 OrthoDB:EOG4CRKZD NextBio:392787
Bgee:Q8R5L3 CleanEx:MM_VPS39 Genevestigator:Q8R5L3
GermOnline:ENSMUSG00000027291 Uniprot:Q8R5L3
Length = 886
Score = 431 (156.8 bits), Expect = 3.2e-57, Sum P(3) = 3.2e-57
Identities = 123/398 (30%), Positives = 208/398 (52%)
Query: 2 VHNAFDSLELISNCSPKIDAVASYGLKILLGCSDGSLKIYSPGSS--ESDRSPPSDYQSL 59
+H+AF+ + ++ +ID +A++ +L+G G L +Y +D + P
Sbjct: 1 MHDAFEPVPILEKLPLQIDCLAAWEEWLLVGTKQGHLLLYRIRKDVVPADVASPESGSCN 60
Query: 60 RKESYELERTISGFSKKPILSMEVLASRQLLLSLSES-IAFHRLPNLETIAVLTKAKGAN 118
R E LE++ FSKK I + V++ ++L+SL E+ I H L + I ++KAKGA+
Sbjct: 61 RFE-VTLEKSNKNFSKK-IQQIHVVSQFKILVSLLENNIYVHDLLTFQQITTVSKAKGAS 118
Query: 119 VYSWD---DRRGF----LCFARQKRVCI-FRHDGGRGFVEVK-DFGVPDTVKSMSWCGEN 169
+++ D G +C A +K++ + F D R F E++ DF VPD KSM+WC +
Sbjct: 119 LFTCDLQHTETGEEVLRMCVAVRKKLQLYFWKD--REFHELQGDFSVPDVPKSMAWCENS 176
Query: 170 ICIAIRKGYMILNATN-GALSEVFPSGRIGXXXXXXXXXXXXXXXXXNIGVFVDQNGKLL 228
IC+ ++ Y ++ G++ E+FP+G+ ++ V +++ G
Sbjct: 177 ICVGFKRDYYLIRVDGKGSIKELFPTGKQLEPLVAPLADGKVAVGQDDLTVVLNEEGICT 236
Query: 229 QADRICWSEAPIAVIIQKPYAIALLPRRVEVRSLRVPYALIQTIVLQNVRHLIPS-SNAV 287
Q + W++ P+A+ Q PY +A+LPR VE+R+L P L+Q+I LQ R + SN +
Sbjct: 237 QKCALNWTDIPVAMEHQPPYIVAVLPRYVEIRTLE-PRLLVQSIELQRPRFITSGGSNII 295
Query: 288 VVALENSIFGLFPVPLGAQIVQLTASGDFEEALALCKLLPPEDASLRAAKEGSIH-IR-- 344
VA + ++ L PVP+ QI QL FE AL L ++ D+ K+ IH I+
Sbjct: 296 YVASNHFVWRLIPVPMATQIQQLLQDKQFELALQLAEMKDDSDSE----KQQQIHHIKNL 351
Query: 345 FAHYLFDTGSYEEAMEHFLASQVDITYALSLYPSIVLP 382
+A LF ++E+M+ F D T+ + LYP + LP
Sbjct: 352 YAFNLFCQKRFDESMQVFAKLGTDPTHVMGLYPDL-LP 388
Score = 233 (87.1 bits), Expect = 3.2e-57, Sum P(3) = 3.2e-57
Identities = 72/237 (30%), Positives = 121/237 (51%)
Query: 532 NYCDVKICEEILQKKNHYTALLELYKSNARHREALKLLHELVEESKSNQSQDEHTQKFNP 591
N+C ++ E +L+K + Y+ L+ LY+ H +AL++L + + K+N H
Sbjct: 485 NHCHIEESEHVLKKAHKYSELIILYEKKGLHEKALQVLVD--QSKKANSPLKGH------ 536
Query: 592 ESIIEYLKPLCGTDPM-LVLEFSMLVLESCPTQTIELFLSG-----NIPADLVNSYLKQY 645
E ++YL+ L GT+ + L+ +S+ VL P +++F ++P D V ++L +
Sbjct: 537 ERTVQYLQHL-GTENLHLIFSYSVWVLRDFPEDGLKIFTEDLPEVESLPRDRVLNFLIEN 595
Query: 646 SPSMQGRYLELMLAMNENSISGNLQNEMVQIYLSEVLDWYSDL--------SAQQKWDEK 697
++ YLE ++ + E + S N ++Q+Y +V D S +E
Sbjct: 596 FKALAIPYLEHIIHVWEETGS-QFHNCLIQLYCEKVQSLMKDYLLSLPTGKSPVPAGEEG 654
Query: 698 A-YSPTRKKLLSALESISGYNPEVLLKRLPADALYEERAILLGKMNQHELALSLYVH 753
R+KLL LE S Y+P L+ P D L EERA+LLG+M +HE AL +YVH
Sbjct: 655 GELGEYRQKLLMFLEISSHYDPGRLICDFPFDGLLEERALLLGRMGKHEQALFIYVH 711
Score = 45 (20.9 bits), Expect = 3.2e-57, Sum P(3) = 3.2e-57
Identities = 8/17 (47%), Positives = 14/17 (82%)
Query: 442 MALIKFLQKKRSSIIEK 458
+ALI +L +KRS +++K
Sbjct: 414 LALIDYLTQKRSQLVKK 430
Score = 45 (20.9 bits), Expect = 1.3e-37, Sum P(3) = 1.3e-37
Identities = 12/32 (37%), Positives = 15/32 (46%)
Query: 731 YEERAILLGKMNQHELALSLYVHKVFLINQPV 762
Y E IL K HE AL + V + N P+
Sbjct: 502 YSELIILYEKKGLHEKALQVLVDQSKKANSPL 533
Score = 41 (19.5 bits), Expect = 3.4e-37, Sum P(3) = 3.4e-37
Identities = 11/38 (28%), Positives = 18/38 (47%)
Query: 537 KICEEILQKKNHYTALLELYKSNARHREALKLLHELVE 574
K+ EE QKK L L + + ++LH+ V+
Sbjct: 806 KVLEENAQKKRFNQVLKNLLHAEFLRVQEERILHQQVK 843
Score = 39 (18.8 bits), Expect = 5.5e-37, Sum P(3) = 5.5e-37
Identities = 22/93 (23%), Positives = 43/93 (46%)
Query: 663 NSISGNLQNEMVQIYLSEVLDWYSDLSAQQKWDEKAYSPTRKKLLSALESISGYNPEVLL 722
N + N Q ++I+L +VL+ +AQ+K ++ K LL A E + +L
Sbjct: 789 NLLPANTQINDIRIFLEKVLEE----NAQKK----RFNQVLKNLLHA-EFLRVQEERILH 839
Query: 723 KRLPADALYEERAILLGKMNQHELALSLYVHKV 755
+++ + EE+ ++ K A + Y + V
Sbjct: 840 QQVKC-IITEEKVCMVCKKKIGNSAFARYPNGV 871
>UNIPROTKB|Q96JC1 [details] [associations]
symbol:VPS39 "Vam6/Vps39-like protein" species:9606 "Homo
sapiens" [GO:0005083 "small GTPase regulator activity"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005765 "lysosomal membrane" evidence=IEA] [GO:0031902 "late
endosome membrane" evidence=IEA] [GO:0030897 "HOPS complex"
evidence=IDA] InterPro:IPR001180 Pfam:PF00780 PROSITE:PS50219
GO:GO:0031902 GO:GO:0005765 GO:GO:0015031 GO:GO:0030897
GO:GO:0005083 EMBL:CH471125 EMBL:AC036103 InterPro:IPR019453
Pfam:PF10367 InterPro:IPR019452 Pfam:PF10366 eggNOG:NOG241434
EMBL:AF280814 EMBL:AF334400 EMBL:AF281052 EMBL:AB018313
EMBL:BX537404 EMBL:BC015817 EMBL:BC068559 IPI:IPI00328236
IPI:IPI00332744 RefSeq:NP_056104.2 UniGene:Hs.88025
ProteinModelPortal:Q96JC1 IntAct:Q96JC1 STRING:Q96JC1
PhosphoSite:Q96JC1 DMDM:66774218 PaxDb:Q96JC1 PRIDE:Q96JC1
DNASU:23339 Ensembl:ENST00000318006 Ensembl:ENST00000348544
GeneID:23339 KEGG:hsa:23339 UCSC:uc001zpc.3 UCSC:uc001zpd.3
CTD:23339 GeneCards:GC15M042450 H-InvDB:HIX0038106 HGNC:HGNC:20593
MIM:612188 neXtProt:NX_Q96JC1 PharmGKB:PA134945163
HOGENOM:HOG000046531 HOVERGEN:HBG056493 InParanoid:Q96JC1
OMA:CLGPIKM PhylomeDB:Q96JC1 ChiTaRS:VPS39 GenomeRNAi:23339
NextBio:45293 Bgee:Q96JC1 CleanEx:HS_VPS39 Genevestigator:Q96JC1
GermOnline:ENSG00000166887 Uniprot:Q96JC1
Length = 886
Score = 428 (155.7 bits), Expect = 1.5e-56, Sum P(3) = 1.5e-56
Identities = 123/398 (30%), Positives = 207/398 (52%)
Query: 2 VHNAFDSLELISNCSPKIDAVASYGLKILLGCSDGSLKIYSPGSS--ESDRSPPSDYQSL 59
+H+AF+ + ++ +ID +A++ +L+G G L +Y +D + P
Sbjct: 1 MHDAFEPVPILEKLPLQIDCLAAWEEWLLVGTKQGHLLLYRIRKDVVPADVASPESGSCN 60
Query: 60 RKESYELERTISGFSKKPILSMEVLASRQLLLSLSES-IAFHRLPNLETIAVLTKAKGAN 118
R E LE++ FSKK I + V++ ++L+SL E+ I H L + I ++KAKGA+
Sbjct: 61 RFE-VTLEKSNKNFSKK-IQQIHVVSQFKILVSLLENNIYVHDLLTFQQITTVSKAKGAS 118
Query: 119 VYSWD---DRRGF----LCFARQKRVCI-FRHDGGRGFVEVK-DFGVPDTVKSMSWCGEN 169
+++ D G +C A +K++ + F D R F E++ DF VPD KSM+WC +
Sbjct: 119 LFTCDLQHTETGEEVLRMCVAVKKKLQLYFWKD--REFHELQGDFSVPDVPKSMAWCENS 176
Query: 170 ICIAIRKGYMILNATN-GALSEVFPSGRIGXXXXXXXXXXXXXXXXXNIGVFVDQNGKLL 228
IC+ ++ Y ++ G++ E+FP+G+ ++ V +++ G
Sbjct: 177 ICVGFKRDYYLIRVDGKGSIKELFPTGKQLEPLVAPLADGKVAVGQDDLTVVLNEEGICT 236
Query: 229 QADRICWSEAPIAVIIQKPYAIALLPRRVEVRSLRVPYALIQTIVLQNVRHLIPS-SNAV 287
Q + W++ P+A+ Q PY IA+LPR VE+R+ P L+Q+I LQ R + SN +
Sbjct: 237 QKCALNWTDIPVAMEHQPPYIIAVLPRYVEIRTFE-PRLLVQSIELQRPRFITSGGSNII 295
Query: 288 VVALENSIFGLFPVPLGAQIVQLTASGDFEEALALCKLLPPEDASLRAAKEGSIH-IR-- 344
VA + ++ L PVP+ QI QL FE AL L ++ D+ K+ IH I+
Sbjct: 296 YVASNHFVWRLIPVPMATQIQQLLQDKQFELALQLAEMKDDSDSE----KQQQIHHIKNL 351
Query: 345 FAHYLFDTGSYEEAMEHFLASQVDITYALSLYPSIVLP 382
+A LF ++E+M+ F D T+ + LYP + LP
Sbjct: 352 YAFNLFCQKRFDESMQVFAKLGTDPTHVMGLYPDL-LP 388
Score = 230 (86.0 bits), Expect = 1.5e-56, Sum P(3) = 1.5e-56
Identities = 71/237 (29%), Positives = 122/237 (51%)
Query: 532 NYCDVKICEEILQKKNHYTALLELYKSNARHREALKLLHELVEESKSNQSQDEHTQKFNP 591
N+C ++ E +L+K + Y+ L+ LY+ H +AL++L + + K+N H
Sbjct: 485 NHCHIEESEHVLKKAHKYSELIILYEKKGLHEKALQVLVD--QSKKANSPLKGH------ 536
Query: 592 ESIIEYLKPLCGTDPM-LVLEFSMLVLESCPTQTIELFLSG-----NIPADLVNSYLKQY 645
E ++YL+ L GT+ + L+ +S+ VL P +++F ++P D V +L +
Sbjct: 537 ERTVQYLQHL-GTENLHLIFSYSVWVLRDFPEDGLKIFTEDLPEVESLPRDRVLGFLIEN 595
Query: 646 SPSMQGRYLELMLAMNENSISGNLQNEMVQIYLSEV--------LDWYSDLSAQQKWDEK 697
+ YLE ++ + E + S N ++Q+Y +V L + + + +E+
Sbjct: 596 FKGLAIPYLEHIIHVWEETGS-RFHNCLIQLYCEKVQGLMKEYLLSFPAGKTPVPAGEEE 654
Query: 698 A-YSPTRKKLLSALESISGYNPEVLLKRLPADALYEERAILLGKMNQHELALSLYVH 753
R+KLL LE S Y+P L+ P D L EERA+LLG+M +HE AL +YVH
Sbjct: 655 GELGEYRQKLLMFLEISSYYDPGRLICDFPFDGLLEERALLLGRMGKHEQALFIYVH 711
Score = 45 (20.9 bits), Expect = 1.5e-56, Sum P(3) = 1.5e-56
Identities = 8/17 (47%), Positives = 14/17 (82%)
Query: 442 MALIKFLQKKRSSIIEK 458
+ALI +L +KRS +++K
Sbjct: 414 LALIDYLTQKRSQLVKK 430
Score = 45 (20.9 bits), Expect = 3.0e-37, Sum P(3) = 3.0e-37
Identities = 12/32 (37%), Positives = 15/32 (46%)
Query: 731 YEERAILLGKMNQHELALSLYVHKVFLINQPV 762
Y E IL K HE AL + V + N P+
Sbjct: 502 YSELIILYEKKGLHEKALQVLVDQSKKANSPL 533
Score = 41 (19.5 bits), Expect = 7.7e-37, Sum P(3) = 7.7e-37
Identities = 11/38 (28%), Positives = 18/38 (47%)
Query: 537 KICEEILQKKNHYTALLELYKSNARHREALKLLHELVE 574
K+ EE QKK L L + + ++LH+ V+
Sbjct: 806 KVLEENAQKKRFNQVLKNLLHAEFLRVQEERILHQQVK 843
Score = 39 (18.8 bits), Expect = 1.2e-36, Sum P(3) = 1.2e-36
Identities = 22/93 (23%), Positives = 43/93 (46%)
Query: 663 NSISGNLQNEMVQIYLSEVLDWYSDLSAQQKWDEKAYSPTRKKLLSALESISGYNPEVLL 722
N + N Q ++I+L +VL+ +AQ+K ++ K LL A E + +L
Sbjct: 789 NLLPANTQINDIRIFLEKVLEE----NAQKK----RFNQVLKNLLHA-EFLRVQEERILH 839
Query: 723 KRLPADALYEERAILLGKMNQHELALSLYVHKV 755
+++ + EE+ ++ K A + Y + V
Sbjct: 840 QQVKC-IITEEKVCMVCKKKIGNSAFARYPNGV 871
>ZFIN|ZDB-GENE-080530-2 [details] [associations]
symbol:vps39 "vacuolar protein sorting 39 homolog (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0016192
"vesicle-mediated transport" evidence=IEA;IMP] [GO:0005083 "small
GTPase regulator activity" evidence=IEA] [GO:0006886 "intracellular
protein transport" evidence=IEA] [GO:0001654 "eye development"
evidence=IMP] [GO:0048066 "developmental pigmentation"
evidence=IMP] InterPro:IPR000547 InterPro:IPR001180 Pfam:PF00637
Pfam:PF00780 PROSITE:PS50219 ZFIN:ZDB-GENE-080530-2 GO:GO:0006886
GO:GO:0016192 GO:GO:0005622 GO:GO:0005083 GO:GO:0048066
GO:GO:0001654 InterPro:IPR019453 Pfam:PF10367 InterPro:IPR019452
Pfam:PF10366 GeneTree:ENSGT00530000063596 EMBL:CU929354
EMBL:CU655820 EMBL:CU928140 IPI:IPI00884691
Ensembl:ENSDART00000113644 ArrayExpress:F1RCV6 Bgee:F1RCV6
Uniprot:F1RCV6
Length = 875
Score = 390 (142.3 bits), Expect = 2.2e-56, Sum P(3) = 2.2e-56
Identities = 114/392 (29%), Positives = 200/392 (51%)
Query: 2 VHNAFDSLELISNCSPKIDAVASYGLKILLGCSDGSLKIYSPGSSESDRSPPSDYQSLRK 61
+H+A++ + ++ +ID +A++ +L+G G L Y D + R
Sbjct: 1 MHDAYEPVPILEKLPLQIDCLAAWDDWLLVGTKPGHLLQYRI---------KKDAGTNRF 51
Query: 62 ESYELERTISGFSKKPILSMEVLASRQLLLSLSES-IAFHRLPNLETIAVLTKAKGANVY 120
E LE++ FSKK I + V++ ++L+SL E+ I H L + I V++KAKGA ++
Sbjct: 52 E-VTLEKSNKNFSKK-IQQLFVVSQYKILVSLLENNIHVHDLLTFQQITVVSKAKGATLF 109
Query: 121 SWD-------DRRGFLCFARQKRVCIFRHDGGRGFVEVK-DFGVPDTVKSMSWCGENICI 172
+ D + + +C A ++++ ++ + R F E++ D PD KSM+WC +IC+
Sbjct: 110 ACDLQQSESGEAKLRMCVAVKRKIQLY-YWKDREFHELQGDVTAPDIPKSMAWCENSICV 168
Query: 173 AIRKGYMILNATN-GALSEVFPSGRIGXXXXXXXXXXXXXXXXXNIGVFVDQNGKLLQAD 231
++ Y ++ G++ E+FP+G+ ++ V +++ G Q
Sbjct: 169 GFKRDYYLIRMDGRGSIKELFPTGKQLEPLVAPLADGKVAVGQDDLTVVLNEEGVCTQKC 228
Query: 232 RICWSEAPIAVIIQKPYAIALLPRRVEVRSLRVPYALIQTIVLQNVRHLIPS-SNAVVVA 290
+ W++ P+A+ Q PY IA+LPR VE+R++ P L+Q++ LQ R + + SN V VA
Sbjct: 229 ALNWTDIPVAMEHQPPYIIAVLPRYVEIRTVE-PRLLVQSVELQRPRFITSAGSNVVYVA 287
Query: 291 LENSIFGLFPVPLGAQIVQLTASGDFEEALALCKLLPPEDASLRAAKEGSIHIRFAHYLF 350
+ ++ L PV + +QI QL FE AL L K+ D R I FA LF
Sbjct: 288 SNHFVWRLVPVSIASQIRQLLQDKQFELALQLAKMKDDSDTDKRQQIH-HIQNLFAFNLF 346
Query: 351 DTGSYEEAMEHFLASQVDITYALSLYPSIVLP 382
++++M+ F D T+ + LYP + LP
Sbjct: 347 CQKRFDDSMQGFAKLGTDPTHVIGLYPDL-LP 377
Score = 276 (102.2 bits), Expect = 2.2e-56, Sum P(3) = 2.2e-56
Identities = 78/237 (32%), Positives = 127/237 (53%)
Query: 532 NYCDVKICEEILQKKNHYTALLELYKSNARHREALKLLHELVEESKSNQSQDEHTQKFNP 591
N+C ++ E +L+K + Y+ L+ LY+ H++AL++L L + +K+N H
Sbjct: 473 NHCHIEESEYVLKKAHKYSELIILYEKKGLHQKALQVL--LDQSTKANSPLKGH------ 524
Query: 592 ESIIEYLKPLCGTDPM-LVLEFSMLVLESCPTQTIELFLSG-----NIPADLVNSYLKQY 645
E ++YL+ L G + + ++ EFS VL+ CP +++F +P D V ++LK+
Sbjct: 525 ERTVQYLQRL-GLENLGIIFEFSPWVLKICPEDGLKIFTEDLTEVETLPRDQVLNFLKEG 583
Query: 646 SPSMQGRYLELMLAMNENSISGNLQNEMVQIYLSEV---LDWYSD-----LSAQQKWDEK 697
+ YLE ++ M + + N ++Q+YL +V + Y + + A EK
Sbjct: 584 FKELAIPYLEHIIHMWDET-RPEFHNVLIQLYLEKVQGLMKAYLNTLPEGIPAVAAGKEK 642
Query: 698 A-YSPTRKKLLSALESISGYNPEVLLKRLPADALYEERAILLGKMNQHELALSLYVH 753
R KLLS LE S Y PE+L+ P D L EERA+LLG+M +HE AL +YVH
Sbjct: 643 GELGEFRNKLLSFLEVSSSYEPEILISDFPFDGLLEERALLLGRMGKHEQALFIYVH 699
Score = 41 (19.5 bits), Expect = 6.7e-32, Sum P(3) = 6.7e-32
Identities = 11/49 (22%), Positives = 25/49 (51%)
Query: 663 NSISGNLQNEMVQIYLSEVLDWYSDLSAQQKWDEKAYSPTRKKLLSALE 711
N + N Q +Q++L VL+ + + ++++D+ S + + L E
Sbjct: 777 NLLPANTQIREIQVFLESVLE---EKAGRKRFDQVLKSLLQAEFLRVQE 822
Score = 40 (19.1 bits), Expect = 2.2e-56, Sum P(3) = 2.2e-56
Identities = 7/17 (41%), Positives = 14/17 (82%)
Query: 442 MALIKFLQKKRSSIIEK 458
+ALI +L +KRS ++++
Sbjct: 403 LALIDYLTQKRSHLVKQ 419
Score = 40 (19.1 bits), Expect = 8.5e-32, Sum P(3) = 8.5e-32
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 731 YEERAILLGKMNQHELALSLYVHKVFLINQPV 762
Y E IL K H+ AL + + + N P+
Sbjct: 490 YSELIILYEKKGLHQKALQVLLDQSTKANSPL 521
Score = 39 (18.8 bits), Expect = 1.1e-31, Sum P(3) = 1.1e-31
Identities = 10/44 (22%), Positives = 20/44 (45%)
Query: 541 EILQKKNHYTALLELYKSNARHREALKLLHELVEESKSNQSQDE 584
++ K + T + L +N + RE L ++EE + D+
Sbjct: 764 QLHHSKLNTTKAINLLPANTQIREIQVFLESVLEEKAGRKRFDQ 807
>UNIPROTKB|E9PT04 [details] [associations]
symbol:Vps39 "Protein Vps39" species:10116 "Rattus
norvegicus" [GO:0005083 "small GTPase regulator activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030897 "HOPS complex" evidence=IEA]
InterPro:IPR000547 InterPro:IPR001180 Pfam:PF00637 Pfam:PF00780
PROSITE:PS50219 RGD:1304858 GO:GO:0006886 GO:GO:0016192
GO:GO:0005622 GO:GO:0005083 InterPro:IPR019453 Pfam:PF10367
InterPro:IPR019452 Pfam:PF10366 GeneTree:ENSGT00530000063596
CTD:23339 IPI:IPI00357904 RefSeq:NP_001012186.2 UniGene:Rn.1508
Ensembl:ENSRNOT00000011155 GeneID:362199 KEGG:rno:362199
NextBio:678996 ArrayExpress:E9PT04 Uniprot:E9PT04
Length = 875
Score = 414 (150.8 bits), Expect = 3.5e-56, Sum P(3) = 3.5e-56
Identities = 122/396 (30%), Positives = 205/396 (51%)
Query: 2 VHNAFDSLELISNCSPKIDAVASYGLKILLGCSDGSLKIYSPGSSESDRSPPSDYQSLRK 61
+H+AF+ + ++ +ID +A++ +L+G G L +Y D R
Sbjct: 1 MHDAFEPVPILEKLPLQIDCLAAWEEWLLVGTKQGHLLLYRIRK---------DVGCNRF 51
Query: 62 ESYELERTISGFSKKPILSMEVLASRQLLLSLSES-IAFHRLPNLETIAVLTKAKGANVY 120
E LE++ FSKK I + V++ ++L+SL E+ I H L + I ++KAKGA+++
Sbjct: 52 E-VTLEKSNKNFSKK-IQQIHVVSQFKILVSLLENNIYVHDLLTFQQITTVSKAKGASLF 109
Query: 121 SWD---DRRGF----LCFARQKRVCI-FRHDGGRGFVEVK-DFGVPDTVKSMSWCGENIC 171
+ D G +C A +K++ + F D R F E++ DF VPD KSM+WC +IC
Sbjct: 110 TCDLQHTETGEEVLRMCVAVRKKLQLYFWKD--REFHELQGDFSVPDVPKSMAWCENSIC 167
Query: 172 IAIRKGYMILNA-TNGALSEVFPSGRIGXXXXXXXXXXXXXXXXXNIGVFVDQNGKLLQA 230
+ ++ Y ++ G++ E+FP+G+ ++ V +++ G Q
Sbjct: 168 VGFKRDYYLIRVDAKGSIKELFPTGKQLEPLVAPLADGKVAVGQDDLTVVLNEEGICTQK 227
Query: 231 DRICWSEAPIAVIIQKPYAIALLPRRVEVRSLRVPYALIQTIVLQNVRHLIPS-SNAVVV 289
+ W++ P+A+ Q PY +A+LPR VE+R+L P L+Q+I LQ R + SN + V
Sbjct: 228 CALNWTDIPVAMEHQPPYIVAVLPRYVEIRTLE-PRLLVQSIELQRPRFITSGGSNIIYV 286
Query: 290 ALENSIFGLFPVPLGAQIVQLTASGDFEEALALCKLLPPEDASLRAAKEGSIH-IR--FA 346
A + ++ L PVP+ QI QL FE AL L ++ D+ K+ IH I+ +A
Sbjct: 287 ASNHFVWRLIPVPMATQIQQLLQDKQFELALQLAEMKDDSDSE----KQQQIHHIKNLYA 342
Query: 347 HYLFDTGSYEEAMEHFLASQVDITYALSLYPSIVLP 382
LF ++E+M+ F D T+ + LYP + LP
Sbjct: 343 FNLFCQKRFDESMQVFAKLGTDPTHVMGLYPDL-LP 377
Score = 242 (90.2 bits), Expect = 3.5e-56, Sum P(3) = 3.5e-56
Identities = 73/237 (30%), Positives = 126/237 (53%)
Query: 532 NYCDVKICEEILQKKNHYTALLELYKSNARHREALKLLHELVEESKSNQSQDEHTQKFNP 591
N+C ++ E +L+K + Y+ L+ LY+ H +AL++L + + K+N H
Sbjct: 474 NHCHIEESEHVLKKAHKYSELIILYEKKGLHEKALQVLVD--QSKKANSPLKGH------ 525
Query: 592 ESIIEYLKPLCGTDPM-LVLEFSMLVLESCPTQTIELFLSG-----NIPADLVNSYLKQY 645
E ++YL+ L GT+ + L+ +S+ VL P +++F ++P D V ++L +
Sbjct: 526 ERTVQYLQHL-GTENLHLIFSYSIWVLRDFPEDGLKIFTEDLPEVESLPRDRVLNFLIEN 584
Query: 646 SPSMQGRYLELMLAMNENSISGNLQNEMVQIYLSEVLDWYSD--LS-----AQQKWDEKA 698
++ YLE ++ + E + N ++Q+Y +V + D LS + E+A
Sbjct: 585 FKALAIPYLEHIIHVWEET-GTRFHNCLIQLYCEKVQNLMKDYLLSLPTGKSPVPAGEEA 643
Query: 699 --YSPTRKKLLSALESISGYNPEVLLKRLPADALYEERAILLGKMNQHELALSLYVH 753
+R+KLL+ LE S Y+P L+ P D L EERA+LLG+M +HE AL +YVH
Sbjct: 644 GELGESRQKLLTFLEISSSYDPGRLICDFPFDGLLEERALLLGRMGKHEQALFIYVH 700
Score = 45 (20.9 bits), Expect = 3.5e-56, Sum P(3) = 3.5e-56
Identities = 8/17 (47%), Positives = 14/17 (82%)
Query: 442 MALIKFLQKKRSSIIEK 458
+ALI +L +KRS +++K
Sbjct: 403 LALIDYLTQKRSQLVKK 419
Score = 45 (20.9 bits), Expect = 1.2e-35, Sum P(3) = 1.2e-35
Identities = 12/32 (37%), Positives = 15/32 (46%)
Query: 731 YEERAILLGKMNQHELALSLYVHKVFLINQPV 762
Y E IL K HE AL + V + N P+
Sbjct: 491 YSELIILYEKKGLHEKALQVLVDQSKKANSPL 522
Score = 41 (19.5 bits), Expect = 3.1e-35, Sum P(3) = 3.1e-35
Identities = 11/38 (28%), Positives = 18/38 (47%)
Query: 537 KICEEILQKKNHYTALLELYKSNARHREALKLLHELVE 574
K+ EE QKK L L + + ++LH+ V+
Sbjct: 795 KVLEENAQKKRFNQVLKNLLHAEFLRVQEERILHQQVK 832
Score = 39 (18.8 bits), Expect = 5.1e-35, Sum P(3) = 5.1e-35
Identities = 22/93 (23%), Positives = 43/93 (46%)
Query: 663 NSISGNLQNEMVQIYLSEVLDWYSDLSAQQKWDEKAYSPTRKKLLSALESISGYNPEVLL 722
N + N Q ++I+L +VL+ +AQ+K ++ K LL A E + +L
Sbjct: 778 NLLPANTQINDIRIFLEKVLEE----NAQKK----RFNQVLKNLLHA-EFLRVQEERILH 828
Query: 723 KRLPADALYEERAILLGKMNQHELALSLYVHKV 755
+++ + EE+ ++ K A + Y + V
Sbjct: 829 QQVKC-IITEEKVCMVCKKKIGNSAFARYPNGV 860
>UNIPROTKB|E2RRH8 [details] [associations]
symbol:VPS39 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030897 "HOPS complex" evidence=IEA]
[GO:0005083 "small GTPase regulator activity" evidence=IEA]
InterPro:IPR001180 Pfam:PF00780 PROSITE:PS50219 GO:GO:0030897
GO:GO:0005083 InterPro:IPR019453 Pfam:PF10367 InterPro:IPR019452
Pfam:PF10366 GeneTree:ENSGT00530000063596 OMA:CLGPIKM
EMBL:AAEX03016084 Ensembl:ENSCAFT00000037504 Uniprot:E2RRH8
Length = 887
Score = 425 (154.7 bits), Expect = 4.4e-56, Sum P(3) = 4.4e-56
Identities = 122/398 (30%), Positives = 210/398 (52%)
Query: 2 VHNAFDSLELISNCSPKIDAVASYGLKILLGCSDGSLKIYSPGSSESDRSPPSDYQSLRK 61
+H+AF+ + ++ +ID +A++ +L+G G L +Y + + + +S
Sbjct: 1 MHDAFEPVPILEKLPLQIDCLAAWEEWLLVGTKQGHLLLYRIRKDAAVLTGVASPESGSC 60
Query: 62 ESYE--LERTISGFSKKPILSMEVLASRQLLLSLSES-IAFHRLPNLETIAVLTKAKGAN 118
+E LE++ FSKK I + V++ ++L+SL E+ I H L + I ++KAKGA+
Sbjct: 61 NRFEVTLEKSNKNFSKK-IQQIHVVSQFKILVSLLENNIYVHDLLTFQQITTVSKAKGAS 119
Query: 119 VYSWD---DRRGF----LCFARQKRVCI-FRHDGGRGFVEVK-DFGVPDTVKSMSWCGEN 169
+++ D G +C A +K++ + F D R F E++ DF VPD KSM+WC +
Sbjct: 120 LFTCDLQHTETGEEVLRMCVAVKKKLQLYFWKD--REFHELQGDFSVPDVPKSMAWCENS 177
Query: 170 ICIAIRKGYMILNATN-GALSEVFPSGRIGXXXXXXXXXXXXXXXXXNIGVFVDQNGKLL 228
IC+ ++ Y ++ G++ E+FP+G+ ++ V +++ G
Sbjct: 178 ICVGFKRDYYLIRVDGKGSIKELFPTGKQLEPLVAPLADGKVAVGQDDLTVVLNEEGICT 237
Query: 229 QADRICWSEAPIAVIIQKPYAIALLPRRVEVRSLRVPYALIQTIVLQNVRHLIPS-SNAV 287
Q + W++ P+A+ Q PY IA+LPR VE+R+ P L+Q+I LQ R + SN +
Sbjct: 238 QKCALNWTDIPVAMEHQPPYIIAVLPRYVEIRTFE-PRLLVQSIELQRPRFITSGGSNII 296
Query: 288 VVALENSIFGLFPVPLGAQIVQLTASGDFEEALALCKLLPPEDASLRAAKEGSIH-IR-- 344
VA + ++ L PVP+ QI QL FE AL L ++ ED+ + K+ IH I+
Sbjct: 297 YVASNHFVWRLIPVPMATQIQQLLQDKQFELALQLAEM--KEDSD--SEKQQQIHHIKNL 352
Query: 345 FAHYLFDTGSYEEAMEHFLASQVDITYALSLYPSIVLP 382
+A LF ++E+M+ F D T+ + LYP + LP
Sbjct: 353 YAFNLFCQKRFDESMQVFAKLGTDPTHVMGLYPDL-LP 389
Score = 229 (85.7 bits), Expect = 4.4e-56, Sum P(3) = 4.4e-56
Identities = 73/238 (30%), Positives = 124/238 (52%)
Query: 532 NYCDVKICEEILQKKNHYTALLELYKSNARHREALKLLHELVEESKSNQSQDEHTQKFNP 591
N+C ++ E +L+K + Y+ L+ LY+ H +AL++L + + K+N H
Sbjct: 486 NHCHIEESEHVLKKAHKYSELIILYEKKGLHEKALQVLVD--QSKKANSPLKGH------ 537
Query: 592 ESIIEYLKPLCGTDPM-LVLEFSMLVLESCPTQTIELFLSG-----NIPADLVNSYLKQY 645
E ++YL+ L GT+ + L+ +S+ VL P +++F ++P D V +L +
Sbjct: 538 ERTVQYLQHL-GTENLHLIFSYSVWVLRDFPEDGLKIFTEDLPEVESLPRDRVLCFLVEN 596
Query: 646 SPSMQGRYLELMLAMNENSISGNLQNEMVQIYLSEV--------LDWYSDLSAQQKWDEK 697
+ YLE ++ + E + S N ++Q+Y +V L + + + +E+
Sbjct: 597 FKGLAIPYLEHVIHVWEETGS-RFHNCLIQLYCEKVQGLMKEYLLSFPAGKTPVPAGEEE 655
Query: 698 A-YSPTRKKLLSALESISGY-NPEVLLKRLPADALYEERAILLGKMNQHELALSLYVH 753
R+KLL LE ISGY +P L+ P D L EERA+LLG+M +HE AL +YVH
Sbjct: 656 GELGEYRRKLLIFLE-ISGYYDPGRLICDFPFDGLLEERALLLGRMGKHEQALFIYVH 712
Score = 45 (20.9 bits), Expect = 4.4e-56, Sum P(3) = 4.4e-56
Identities = 8/17 (47%), Positives = 14/17 (82%)
Query: 442 MALIKFLQKKRSSIIEK 458
+ALI +L +KRS +++K
Sbjct: 415 LALIDYLTQKRSQLVKK 431
Score = 45 (20.9 bits), Expect = 6.8e-37, Sum P(3) = 6.8e-37
Identities = 12/32 (37%), Positives = 15/32 (46%)
Query: 731 YEERAILLGKMNQHELALSLYVHKVFLINQPV 762
Y E IL K HE AL + V + N P+
Sbjct: 503 YSELIILYEKKGLHEKALQVLVDQSKKANSPL 534
Score = 41 (19.5 bits), Expect = 1.8e-36, Sum P(3) = 1.8e-36
Identities = 11/38 (28%), Positives = 18/38 (47%)
Query: 537 KICEEILQKKNHYTALLELYKSNARHREALKLLHELVE 574
K+ EE QKK L L + + ++LH+ V+
Sbjct: 807 KVLEENAQKKRFNQVLKNLLHAEFLRVQEERILHQQVK 844
Score = 39 (18.8 bits), Expect = 2.8e-36, Sum P(3) = 2.8e-36
Identities = 22/93 (23%), Positives = 43/93 (46%)
Query: 663 NSISGNLQNEMVQIYLSEVLDWYSDLSAQQKWDEKAYSPTRKKLLSALESISGYNPEVLL 722
N + N Q ++I+L +VL+ +AQ+K ++ K LL A E + +L
Sbjct: 790 NLLPANTQINDIRIFLEKVLEE----NAQKK----RFNQVLKNLLHA-EFLRVQEERILH 840
Query: 723 KRLPADALYEERAILLGKMNQHELALSLYVHKV 755
+++ + EE+ ++ K A + Y + V
Sbjct: 841 QQVKC-IITEEKVCMVCKKKIGNSAFARYPNGV 872
>UNIPROTKB|F1SFK5 [details] [associations]
symbol:VPS39 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030897 "HOPS complex" evidence=IEA] [GO:0005083 "small
GTPase regulator activity" evidence=IEA] InterPro:IPR001180
Pfam:PF00780 PROSITE:PS50219 GO:GO:0030897 GO:GO:0005083
InterPro:IPR019453 Pfam:PF10367 InterPro:IPR019452 Pfam:PF10366
GeneTree:ENSGT00530000063596 OMA:CLGPIKM EMBL:CU041383
Ensembl:ENSSSCT00000005227 Uniprot:F1SFK5
Length = 875
Score = 412 (150.1 bits), Expect = 3.3e-55, Sum P(3) = 3.3e-55
Identities = 122/396 (30%), Positives = 204/396 (51%)
Query: 2 VHNAFDSLELISNCSPKIDAVASYGLKILLGCSDGSLKIYSPGSSESDRSPPSDYQSLRK 61
+H+AF+ + ++ +ID +A++ +L+G G L +Y D R
Sbjct: 1 MHDAFEPVPILEKLPLQIDCLAAWEEWLLVGTKQGHLLLYRIRK---------DVGCNRF 51
Query: 62 ESYELERTISGFSKKPILSMEVLASRQLLLSLSES-IAFHRLPNLETIAVLTKAKGANVY 120
E LE++ FSKK I + V++ ++L+SL E+ I H L + I ++KAKGA+++
Sbjct: 52 E-VTLEKSNKNFSKK-IQQIHVVSQFKILVSLLENNIYVHDLLTFQQITTVSKAKGASLF 109
Query: 121 SWD-------DRRGFLCFARQKRVCI-FRHDGGRGFVEVK-DFGVPDTVKSMSWCGENIC 171
+ D D +C A +K++ + F D R F E++ DF VPD KSM+WC +IC
Sbjct: 110 TCDLQHTETGDEVLRMCVAVKKKLQLYFWKD--REFHELQGDFSVPDVPKSMAWCENSIC 167
Query: 172 IAIRKGYMILNATN-GALSEVFPSGRIGXXXXXXXXXXXXXXXXXNIGVFVDQNGKLLQA 230
+ ++ Y ++ G++ E+FP+G+ ++ V +++ G Q
Sbjct: 168 VGFKRDYYLIRVDGKGSIKELFPTGKQLEPLVAPLADGKVAVGQDDLTVVLNEEGICTQK 227
Query: 231 DRICWSEAPIAVIIQKPYAIALLPRRVEVRSLRVPYALIQTIVLQNVRHLIPS-SNAVVV 289
+ W++ P+A+ Q PY IA+LPR VE+R+ P L+Q+I LQ R + SN + V
Sbjct: 228 CALNWTDIPVAMEHQPPYIIAVLPRYVEIRTFE-PRLLVQSIELQRPRFITSGGSNIIYV 286
Query: 290 ALENSIFGLFPVPLGAQIVQLTASGDFEEALALCKLLPPEDASLRAAKEGSIH-IR--FA 346
A + ++ L PVP+ QI QL FE AL L ++ D+ K+ IH I+ +A
Sbjct: 287 ASNHFVWRLIPVPMATQIQQLLQDKQFELALQLAEMKDDSDSE----KQQQIHHIKNLYA 342
Query: 347 HYLFDTGSYEEAMEHFLASQVDITYALSLYPSIVLP 382
LF ++E+M+ F D T+ + LYP + LP
Sbjct: 343 FNLFCQKRFDESMQVFAKLGTDPTHVMGLYPDL-LP 377
Score = 235 (87.8 bits), Expect = 3.3e-55, Sum P(3) = 3.3e-55
Identities = 74/238 (31%), Positives = 125/238 (52%)
Query: 532 NYCDVKICEEILQKKNHYTALLELYKSNARHREALKLLHELVEESKSNQSQDEHTQKFNP 591
N+C ++ E +L+K + Y+ L+ LY+ H +AL++L + + K+N H
Sbjct: 474 NHCHIEESEHVLKKAHKYSELIILYEKKGLHEKALQVLVD--QSKKANSPLKGH------ 525
Query: 592 ESIIEYLKPLCGTDPM-LVLEFSMLVLESCPTQTIELFLSG-----NIPADLVNSYLKQY 645
E ++YL+ L GT+ + L+ +S+ VL P +++F ++P D V +L +
Sbjct: 526 ERTVQYLQHL-GTENLHLIFSYSVWVLRDFPEDGLKIFTEDLPEVESLPRDRVLGFLIEN 584
Query: 646 SPSMQGRYLELMLAMNENSISGNLQNEMVQIYLSEV--------LDWYSDLSAQQKWDEK 697
S+ YLE ++ + E + S N ++Q+Y +V L + + + +E+
Sbjct: 585 FKSLAIPYLEHVIHVWEETGS-RFHNCLIQLYCEKVQGLMKEYLLSFPAGTAPVPAGEEE 643
Query: 698 A-YSPTRKKLLSALESISGY-NPEVLLKRLPADALYEERAILLGKMNQHELALSLYVH 753
R+KLL LE ISGY +P L+ P D L EERA+LLG+M +HE AL +YVH
Sbjct: 644 GELGEYRRKLLLFLE-ISGYYDPARLICDFPFDGLLEERALLLGRMGKHEQALFIYVH 700
Score = 45 (20.9 bits), Expect = 3.3e-55, Sum P(3) = 3.3e-55
Identities = 8/17 (47%), Positives = 14/17 (82%)
Query: 442 MALIKFLQKKRSSIIEK 458
+ALI +L +KRS +++K
Sbjct: 403 LALIDYLTQKRSQLVKK 419
Score = 45 (20.9 bits), Expect = 2.1e-35, Sum P(3) = 2.1e-35
Identities = 12/32 (37%), Positives = 15/32 (46%)
Query: 731 YEERAILLGKMNQHELALSLYVHKVFLINQPV 762
Y E IL K HE AL + V + N P+
Sbjct: 491 YSELIILYEKKGLHEKALQVLVDQSKKANSPL 522
Score = 41 (19.5 bits), Expect = 5.4e-35, Sum P(3) = 5.4e-35
Identities = 11/38 (28%), Positives = 18/38 (47%)
Query: 537 KICEEILQKKNHYTALLELYKSNARHREALKLLHELVE 574
K+ EE QKK L L + + ++LH+ V+
Sbjct: 795 KVLEENAQKKRFNQVLKNLLHAEFLRVQEERILHQQVK 832
Score = 39 (18.8 bits), Expect = 8.8e-35, Sum P(3) = 8.8e-35
Identities = 22/93 (23%), Positives = 43/93 (46%)
Query: 663 NSISGNLQNEMVQIYLSEVLDWYSDLSAQQKWDEKAYSPTRKKLLSALESISGYNPEVLL 722
N + N Q ++I+L +VL+ +AQ+K ++ K LL A E + +L
Sbjct: 778 NLLPANTQINDIRIFLEKVLEE----NAQKK----RFNQVLKNLLHA-EFLRVQEERILH 828
Query: 723 KRLPADALYEERAILLGKMNQHELALSLYVHKV 755
+++ + EE+ ++ K A + Y + V
Sbjct: 829 QQVKC-IITEEKVCMVCKKKIGNSAFAKYPNGV 860
>UNIPROTKB|F1NID0 [details] [associations]
symbol:VPS39 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005083 "small GTPase regulator activity" evidence=IEA]
[GO:0030897 "HOPS complex" evidence=IEA] InterPro:IPR001180
Pfam:PF00780 PROSITE:PS50219 GO:GO:0030897 GO:GO:0005083
InterPro:IPR019453 Pfam:PF10367 InterPro:IPR019452 Pfam:PF10366
GeneTree:ENSGT00530000063596 OMA:CLGPIKM EMBL:AADN02033558
EMBL:AADN02033559 IPI:IPI00595572 Ensembl:ENSGALT00000014624
ArrayExpress:F1NID0 Uniprot:F1NID0
Length = 876
Score = 396 (144.5 bits), Expect = 1.1e-54, Sum P(3) = 1.1e-54
Identities = 120/396 (30%), Positives = 201/396 (50%)
Query: 2 VHNAFDSLELISNCSPKIDAVASYGLKILLGCSDGSLKIYSPGSSESDRSPPSDYQSLRK 61
+H+AF+ + ++ +ID +A++ +L+G G L +Y D R
Sbjct: 1 MHDAFEHVPILEKLPLQIDCLAAWEEWLLVGTKQGHLLLYRI---------KKDIGCNRF 51
Query: 62 ESYELERTISGFSKKPILSMEVLASRQLLLSLSES-IAFHRLPNLETIAVLTKAKGANVY 120
E LE++ FSKK I + V++ ++L+SL E+ I H L + I ++KAKGA+++
Sbjct: 52 E-VTLEKSNKNFSKK-IQQIHVVSQFKILVSLLENNIYVHDLLTFQQITTVSKAKGASLF 109
Query: 121 SWDDRRGF-------LCFARQKRVCI-FRHDGGRGFVEVK-DFGVPDTVKSMSWCGENIC 171
+ D + +C A +K++ + F D R F E++ DF VPD KSM+WC +IC
Sbjct: 110 TCDLQHSDNGEEVLRMCVAVRKKLQLYFWKD--REFHELQGDFSVPDVPKSMAWCENSIC 167
Query: 172 IAIRKGYMILNATN-GALSEVFPSGRIGXXXXXXXXXXXXXXXXXNIGVFVDQNGKLLQA 230
+ ++ Y ++ G++ E+FP+G+ ++ V +++ G Q
Sbjct: 168 VGFKRDYYLIRVDGKGSIKELFPTGKQLEPLVAPVADGKVAVGQDDLTVVLNEEGVCTQK 227
Query: 231 DRICWSEAPIAVIIQKPYAIALLPRRVEVRSLRVPYALIQTIVLQNVRHLIPS-SNAVVV 289
+ W++ PIA+ Q PY IA+LPR VE+R+ P L+Q+I LQ R + +N + V
Sbjct: 228 CALNWTDIPIAMEHQPPYIIAVLPRYVEIRTFE-PRLLVQSIELQRPRFITSGGTNIIYV 286
Query: 290 ALENSIFGLFPVP-LGAQIVQLTASGDFEEALALCKLLPPEDASLRAAKEGSIHIR--FA 346
A + ++ L PV + QI QL FE AL L ++ D+ R HI+ FA
Sbjct: 287 ASNHFVWRLIPVSTIATQIQQLLQDKQFELALQLAEMKDDSDSEKRQQIH---HIKNLFA 343
Query: 347 HYLFDTGSYEEAMEHFLASQVDITYALSLYPSIVLP 382
LF ++E+M+ F D T+ + LYP + LP
Sbjct: 344 FNLFCQKRFDESMQVFAKLGTDPTHVMGLYPDL-LP 378
Score = 248 (92.4 bits), Expect = 1.1e-54, Sum P(3) = 1.1e-54
Identities = 74/236 (31%), Positives = 120/236 (50%)
Query: 532 NYCDVKICEEILQKKNHYTALLELYKSNARHREALKLLHELVEESKSNQSQDEHTQKFNP 591
N+C ++ E +L+K + Y+ L+ LY+ H +AL++L + + K+N H
Sbjct: 475 NHCHIEESEHVLKKAHKYSELIILYEKKGLHEKALQVLVD--QSKKANSPLKGH------ 526
Query: 592 ESIIEYLKPLCGTDPMLVLEFSMLVLESCPTQTIELFLSG-----NIPADLVNSYLKQYS 646
E ++YL+ L + LV +S+ VL P +++F +P D V S+L +
Sbjct: 527 ERTVQYLQHLGAENLHLVFSYSVWVLRDFPEDGLKIFTEDLPEVEALPRDKVLSFLIENF 586
Query: 647 PSMQGRYLELMLAMNENSISGNLQNEMVQIY-------LSEVLDWY-SDLSAQQKWDEKA 698
S+ YLE ++ + E + + N ++Q+Y + E L+ + +D S +E
Sbjct: 587 KSLAIPYLEHIIHVWEET-GAHFHNCLIQLYCEKVQGLMKEYLNSFPADKSPVPAGEEGG 645
Query: 699 -YSPTRKKLLSALESISGYNPEVLLKRLPADALYEERAILLGKMNQHELALSLYVH 753
RKKLL LE S Y P L+ P D L EERA+LLG+M +HE AL +YVH
Sbjct: 646 DLGDYRKKLLLFLEKSSCYEPSRLISDFPFDGLLEERALLLGRMGKHEQALFIYVH 701
Score = 45 (20.9 bits), Expect = 1.1e-54, Sum P(3) = 1.1e-54
Identities = 8/17 (47%), Positives = 14/17 (82%)
Query: 442 MALIKFLQKKRSSIIEK 458
+ALI +L +KRS +++K
Sbjct: 404 LALIDYLTQKRSQLVKK 420
Score = 45 (20.9 bits), Expect = 1.6e-33, Sum P(3) = 1.6e-33
Identities = 12/32 (37%), Positives = 15/32 (46%)
Query: 731 YEERAILLGKMNQHELALSLYVHKVFLINQPV 762
Y E IL K HE AL + V + N P+
Sbjct: 492 YSELIILYEKKGLHEKALQVLVDQSKKANSPL 523
Score = 41 (19.5 bits), Expect = 4.1e-33, Sum P(3) = 4.1e-33
Identities = 11/38 (28%), Positives = 18/38 (47%)
Query: 537 KICEEILQKKNHYTALLELYKSNARHREALKLLHELVE 574
K+ EE QKK L L + + ++LH+ V+
Sbjct: 796 KVLEENAQKKRFNQVLKNLLHAEFLRVQEERILHQQVK 833
Score = 37 (18.1 bits), Expect = 1.1e-32, Sum P(3) = 1.1e-32
Identities = 21/93 (22%), Positives = 42/93 (45%)
Query: 663 NSISGNLQNEMVQIYLSEVLDWYSDLSAQQKWDEKAYSPTRKKLLSALESISGYNPEVLL 722
N + N Q ++I+L +VL+ +AQ+K ++ K LL A E + +L
Sbjct: 779 NLLPANTQISEIRIFLEKVLEE----NAQKK----RFNQVLKNLLHA-EFLRVQEERILH 829
Query: 723 KRLPADALYEERAILLGKMNQHELALSLYVHKV 755
+++ + EE+ + K A + Y + +
Sbjct: 830 QQVKC-IITEEKVCTVCKKKIGNSAFARYPNAI 861
>UNIPROTKB|E1BM41 [details] [associations]
symbol:VPS39 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0030897 "HOPS complex" evidence=IEA] [GO:0005083 "small
GTPase regulator activity" evidence=IEA] InterPro:IPR001180
Pfam:PF00780 PROSITE:PS50219 GO:GO:0030897 GO:GO:0005083
InterPro:IPR019453 Pfam:PF10367 InterPro:IPR019452 Pfam:PF10366
GeneTree:ENSGT00530000063596 CTD:23339 OMA:CLGPIKM
EMBL:DAAA02028571 EMBL:DAAA02028570 IPI:IPI00708365
RefSeq:NP_001193173.1 UniGene:Bt.26861 Ensembl:ENSBTAT00000006949
GeneID:520990 KEGG:bta:520990 NextBio:20873215 Uniprot:E1BM41
Length = 875
Score = 410 (149.4 bits), Expect = 1.2e-54, Sum P(3) = 1.2e-54
Identities = 123/396 (31%), Positives = 203/396 (51%)
Query: 2 VHNAFDSLELISNCSPKIDAVASYGLKILLGCSDGSLKIYSPGSSESDRSPPSDYQSLRK 61
+H+AF+ + ++ +ID +A++ +L+G G L +Y D R
Sbjct: 1 MHDAFEPVPILEKLPLQIDCLAAWEEWLLVGTKQGHLLLYRIRK---------DVGCNRF 51
Query: 62 ESYELERTISGFSKKPILSMEVLASRQLLLSLSES-IAFHRLPNLETIAVLTKAKGANVY 120
E LE++ FSKK I + V++ ++L+SL E+ I H L + I ++KAKGA+++
Sbjct: 52 E-VTLEKSNKNFSKK-IQQIHVVSQFKILVSLLENNIYVHDLLTFQQITTVSKAKGASLF 109
Query: 121 SWD-------DRRGFLCFARQKRVCI-FRHDGGRGFVEVK-DFGVPDTVKSMSWCGENIC 171
+ D D +C A +K++ + F D R F E++ DF VPD KSM+WC +IC
Sbjct: 110 TCDLQHAETGDEVLRMCVAVKKKLQLYFWKD--REFHELQGDFSVPDVPKSMAWCENSIC 167
Query: 172 IAIRKGYMILNATN-GALSEVFPSGRIGXXXXXXXXXXXXXXXXXNIGVFVDQNGKLLQA 230
+ ++ Y ++ GA E+FP+G+ ++ V +++ G Q
Sbjct: 168 VGFKRDYYLIRVDGKGANKELFPTGKQLEPLVAPLADGKVAVGQDDLTVVLNEEGICTQK 227
Query: 231 DRICWSEAPIAVIIQKPYAIALLPRRVEVRSLRVPYALIQTIVLQNVRHLIPS-SNAVVV 289
+ W++ P+A+ Q PY IA+LPR VE+R+ P L+Q+I LQ R + SN + V
Sbjct: 228 CALNWTDIPVAMEHQPPYIIAVLPRYVEIRTFE-PRLLVQSIELQRPRFITSGGSNIIYV 286
Query: 290 ALENSIFGLFPVPLGAQIVQLTASGDFEEALALCKLLPPEDASLRAAKEGSIH-IR--FA 346
A + ++ L PVP+ QI QL FE AL L ++ D+ K+ IH I+ +A
Sbjct: 287 ASNHFVWRLIPVPMATQIQQLLQDKQFELALQLAEMKDDSDSE----KQQQIHHIKNLYA 342
Query: 347 HYLFDTGSYEEAMEHFLASQVDITYALSLYPSIVLP 382
LF ++E+M+ F D T+ + LYP + LP
Sbjct: 343 FNLFCQKRFDESMQVFAKLGTDPTHVMGLYPDL-LP 377
Score = 232 (86.7 bits), Expect = 1.2e-54, Sum P(3) = 1.2e-54
Identities = 71/237 (29%), Positives = 122/237 (51%)
Query: 532 NYCDVKICEEILQKKNHYTALLELYKSNARHREALKLLHELVEESKSNQSQDEHTQKFNP 591
N+C ++ E +L+K + Y+ L+ LY+ H +AL++L + + K+N H
Sbjct: 474 NHCHIEESEHVLKKAHKYSELIILYEKKGLHEKALQVLVD--QSKKANSPLKGH------ 525
Query: 592 ESIIEYLKPLCGTDPM-LVLEFSMLVLESCPTQTIELFLSG-----NIPADLVNSYLKQY 645
E ++YL+ L GT+ + L+ +S+ VL P +++F ++P D V +L +
Sbjct: 526 ERTVQYLQHL-GTENLHLIFSYSVWVLRDFPEDGLKIFTEDLPEVESLPRDRVLGFLVEN 584
Query: 646 SPSMQGRYLELMLAMNENSISGNLQNEMVQIYLSEV--------LDWYSDLSAQQKWDEK 697
+ YLE ++ + E + S N ++Q+Y +V L + + + +E+
Sbjct: 585 FKGLAIPYLEHVIHVWEETGS-RFHNCLIQLYCEKVQGLMKEYLLSFPAGKAPVPAGEEE 643
Query: 698 A-YSPTRKKLLSALESISGYNPEVLLKRLPADALYEERAILLGKMNQHELALSLYVH 753
R+KLL LE S Y+P L+ P D L EERA+LLG+M +HE AL +YVH
Sbjct: 644 GELGEYRRKLLMFLEISSYYDPGRLICDFPFDGLLEERALLLGRMGKHEQALFIYVH 700
Score = 45 (20.9 bits), Expect = 1.2e-54, Sum P(3) = 1.2e-54
Identities = 8/17 (47%), Positives = 14/17 (82%)
Query: 442 MALIKFLQKKRSSIIEK 458
+ALI +L +KRS +++K
Sbjct: 403 LALIDYLTQKRSQLVKK 419
Score = 45 (20.9 bits), Expect = 3.6e-35, Sum P(3) = 3.6e-35
Identities = 12/32 (37%), Positives = 15/32 (46%)
Query: 731 YEERAILLGKMNQHELALSLYVHKVFLINQPV 762
Y E IL K HE AL + V + N P+
Sbjct: 491 YSELIILYEKKGLHEKALQVLVDQSKKANSPL 522
Score = 41 (19.5 bits), Expect = 9.4e-35, Sum P(3) = 9.4e-35
Identities = 11/38 (28%), Positives = 18/38 (47%)
Query: 537 KICEEILQKKNHYTALLELYKSNARHREALKLLHELVE 574
K+ EE QKK L L + + ++LH+ V+
Sbjct: 795 KVLEENAQKKRFNQVLKNLLHAEFLRVQEERILHQQVK 832
Score = 39 (18.8 bits), Expect = 1.5e-34, Sum P(3) = 1.5e-34
Identities = 22/93 (23%), Positives = 43/93 (46%)
Query: 663 NSISGNLQNEMVQIYLSEVLDWYSDLSAQQKWDEKAYSPTRKKLLSALESISGYNPEVLL 722
N + N Q ++I+L +VL+ +AQ+K ++ K LL A E + +L
Sbjct: 778 NLLPANTQINDIRIFLEKVLEE----NAQKK----RFNQVLKNLLHA-EFLRVQEERILH 828
Query: 723 KRLPADALYEERAILLGKMNQHELALSLYVHKV 755
+++ + EE+ ++ K A + Y + V
Sbjct: 829 QQVKC-IITEEKVCMVCKKKIGNSAFARYPNGV 860
>UNIPROTKB|E2RG39 [details] [associations]
symbol:VPS39 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005083 "small GTPase regulator activity"
evidence=IEA] InterPro:IPR001180 Pfam:PF00780 PROSITE:PS50219
GO:GO:0005083 InterPro:IPR019453 Pfam:PF10367 InterPro:IPR019452
Pfam:PF10366 GeneTree:ENSGT00530000063596 CTD:23339
EMBL:AAEX03016084 RefSeq:XP_544640.2 Ensembl:ENSCAFT00000015964
GeneID:487516 KEGG:cfa:487516 NextBio:20861099 Uniprot:E2RG39
Length = 875
Score = 411 (149.7 bits), Expect = 1.8e-54, Sum P(3) = 1.8e-54
Identities = 121/396 (30%), Positives = 205/396 (51%)
Query: 2 VHNAFDSLELISNCSPKIDAVASYGLKILLGCSDGSLKIYSPGSSESDRSPPSDYQSLRK 61
+H+AF+ + ++ +ID +A++ +L+G G L +Y D +
Sbjct: 1 MHDAFEPVPILEKLPLQIDCLAAWEEWLLVGTKQGHLLLYR---IRKDAG-------CNR 50
Query: 62 ESYELERTISGFSKKPILSMEVLASRQLLLSLSES-IAFHRLPNLETIAVLTKAKGANVY 120
LE++ FSKK I + V++ ++L+SL E+ I H L + I ++KAKGA+++
Sbjct: 51 FEVTLEKSNKNFSKK-IQQIHVVSQFKILVSLLENNIYVHDLLTFQQITTVSKAKGASLF 109
Query: 121 SWD---DRRGF----LCFARQKRVCI-FRHDGGRGFVEVK-DFGVPDTVKSMSWCGENIC 171
+ D G +C A +K++ + F D R F E++ DF VPD KSM+WC +IC
Sbjct: 110 TCDLQHTETGEEVLRMCVAVKKKLQLYFWKD--REFHELQGDFSVPDVPKSMAWCENSIC 167
Query: 172 IAIRKGYMILNATN-GALSEVFPSGRIGXXXXXXXXXXXXXXXXXNIGVFVDQNGKLLQA 230
+ ++ Y ++ G++ E+FP+G+ ++ V +++ G Q
Sbjct: 168 VGFKRDYYLIRVDGKGSIKELFPTGKQLEPLVAPLADGKVAVGQDDLTVVLNEEGICTQK 227
Query: 231 DRICWSEAPIAVIIQKPYAIALLPRRVEVRSLRVPYALIQTIVLQNVRHLIPS-SNAVVV 289
+ W++ P+A+ Q PY IA+LPR VE+R+ P L+Q+I LQ R + SN + V
Sbjct: 228 CALNWTDIPVAMEHQPPYIIAVLPRYVEIRTFE-PRLLVQSIELQRPRFITSGGSNIIYV 286
Query: 290 ALENSIFGLFPVPLGAQIVQLTASGDFEEALALCKLLPPEDASLRAAKEGSIH-IR--FA 346
A + ++ L PVP+ QI QL FE AL L ++ ED+ + K+ IH I+ +A
Sbjct: 287 ASNHFVWRLIPVPMATQIQQLLQDKQFELALQLAEM--KEDSD--SEKQQQIHHIKNLYA 342
Query: 347 HYLFDTGSYEEAMEHFLASQVDITYALSLYPSIVLP 382
LF ++E+M+ F D T+ + LYP + LP
Sbjct: 343 FNLFCQKRFDESMQVFAKLGTDPTHVMGLYPDL-LP 377
Score = 229 (85.7 bits), Expect = 1.8e-54, Sum P(3) = 1.8e-54
Identities = 73/238 (30%), Positives = 124/238 (52%)
Query: 532 NYCDVKICEEILQKKNHYTALLELYKSNARHREALKLLHELVEESKSNQSQDEHTQKFNP 591
N+C ++ E +L+K + Y+ L+ LY+ H +AL++L + + K+N H
Sbjct: 474 NHCHIEESEHVLKKAHKYSELIILYEKKGLHEKALQVLVD--QSKKANSPLKGH------ 525
Query: 592 ESIIEYLKPLCGTDPM-LVLEFSMLVLESCPTQTIELFLSG-----NIPADLVNSYLKQY 645
E ++YL+ L GT+ + L+ +S+ VL P +++F ++P D V +L +
Sbjct: 526 ERTVQYLQHL-GTENLHLIFSYSVWVLRDFPEDGLKIFTEDLPEVESLPRDRVLCFLVEN 584
Query: 646 SPSMQGRYLELMLAMNENSISGNLQNEMVQIYLSEV--------LDWYSDLSAQQKWDEK 697
+ YLE ++ + E + S N ++Q+Y +V L + + + +E+
Sbjct: 585 FKGLAIPYLEHVIHVWEETGS-RFHNCLIQLYCEKVQGLMKEYLLSFPAGKTPVPAGEEE 643
Query: 698 A-YSPTRKKLLSALESISGY-NPEVLLKRLPADALYEERAILLGKMNQHELALSLYVH 753
R+KLL LE ISGY +P L+ P D L EERA+LLG+M +HE AL +YVH
Sbjct: 644 GELGEYRRKLLIFLE-ISGYYDPGRLICDFPFDGLLEERALLLGRMGKHEQALFIYVH 700
Score = 45 (20.9 bits), Expect = 1.8e-54, Sum P(3) = 1.8e-54
Identities = 8/17 (47%), Positives = 14/17 (82%)
Query: 442 MALIKFLQKKRSSIIEK 458
+ALI +L +KRS +++K
Sbjct: 403 LALIDYLTQKRSQLVKK 419
Score = 45 (20.9 bits), Expect = 2.7e-35, Sum P(3) = 2.7e-35
Identities = 12/32 (37%), Positives = 15/32 (46%)
Query: 731 YEERAILLGKMNQHELALSLYVHKVFLINQPV 762
Y E IL K HE AL + V + N P+
Sbjct: 491 YSELIILYEKKGLHEKALQVLVDQSKKANSPL 522
Score = 41 (19.5 bits), Expect = 7.1e-35, Sum P(3) = 7.1e-35
Identities = 11/38 (28%), Positives = 18/38 (47%)
Query: 537 KICEEILQKKNHYTALLELYKSNARHREALKLLHELVE 574
K+ EE QKK L L + + ++LH+ V+
Sbjct: 795 KVLEENAQKKRFNQVLKNLLHAEFLRVQEERILHQQVK 832
Score = 39 (18.8 bits), Expect = 1.1e-34, Sum P(3) = 1.1e-34
Identities = 22/93 (23%), Positives = 43/93 (46%)
Query: 663 NSISGNLQNEMVQIYLSEVLDWYSDLSAQQKWDEKAYSPTRKKLLSALESISGYNPEVLL 722
N + N Q ++I+L +VL+ +AQ+K ++ K LL A E + +L
Sbjct: 778 NLLPANTQINDIRIFLEKVLEE----NAQKK----RFNQVLKNLLHA-EFLRVQEERILH 828
Query: 723 KRLPADALYEERAILLGKMNQHELALSLYVHKV 755
+++ + EE+ ++ K A + Y + V
Sbjct: 829 QQVKC-IITEEKVCMVCKKKIGNSAFARYPNGV 860
>UNIPROTKB|E1BX81 [details] [associations]
symbol:VPS39 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005083 "small GTPase regulator activity" evidence=IEA]
InterPro:IPR001180 Pfam:PF00780 PROSITE:PS50219 GO:GO:0005083
InterPro:IPR019453 Pfam:PF10367 InterPro:IPR019452 Pfam:PF10366
GeneTree:ENSGT00530000063596 EMBL:AADN02033558 EMBL:AADN02033559
IPI:IPI00581963 Ensembl:ENSGALT00000021328 ArrayExpress:E1BX81
Uniprot:E1BX81
Length = 871
Score = 385 (140.6 bits), Expect = 2.1e-53, Sum P(3) = 2.1e-53
Identities = 119/395 (30%), Positives = 199/395 (50%)
Query: 2 VHNAFDSLELISNCSPKIDAVASYGLKILLGCSDGSLKIYSPGSSESDRSPPSDYQSLRK 61
+H+AF+ + ++ +ID +A++ +L+G G L +Y D R
Sbjct: 1 MHDAFEHVPILEKLPLQIDCLAAWEEWLLVGTKQGHLLLYRI---------KKDIGCNRF 51
Query: 62 ESYELERTISGFSKKPILSMEVLASRQLLLSLSES-IAFHRLPNLETIAVLTKAKGANVY 120
E LE++ FSKK I + V++ ++L+SL E+ I H L + I ++KAKGA+++
Sbjct: 52 E-VTLEKSNKNFSKK-IQQIHVVSQFKILVSLLENNIYVHDLLTFQQITTVSKAKGASLF 109
Query: 121 SWDDRRGF-------LCFARQKRVCI-FRHDGGRGFVEVK-DFGVPDTVKSMSWCGENIC 171
+ D + +C A +K++ + F D R F E++ DF VPD KSM+WC +IC
Sbjct: 110 TCDLQHSDNGEEVLRMCVAVRKKLQLYFWKD--REFHELQGDFSVPDVPKSMAWCENSIC 167
Query: 172 IAIRKGYMILNATN-GALSEVFPSGRIGXXXXXXXXXXXXXXXXXNIGVFVDQNGKLLQA 230
+ ++ Y ++ G++ E+FP+G+ ++ V +++ G Q
Sbjct: 168 VGFKRDYYLIRVDGKGSIKELFPTGKQLEPLVAPVADGKVAVGQDDLTVVLNEEGVCTQK 227
Query: 231 DRICWSEAPIAVIIQKPYAIALLPRRVEVRSLRVPYALIQTIVLQNVRHLIPS-SNAVVV 289
+ W++ PIA+ Q PY IA+LPR VE+R+ P L+Q+I LQ R + +N + V
Sbjct: 228 CALNWTDIPIAMEHQPPYIIAVLPRYVEIRTFE-PRLLVQSIELQRPRFITSGGTNIIYV 286
Query: 290 ALENSIFGLFPVPLGAQIVQLTASGDFEEALALCKLLPPEDASLRAAKEGSIHIR--FAH 347
A + ++ L P QI QL FE AL L ++ D+ R HI+ FA
Sbjct: 287 ASNHFVWRLIPT----QIQQLLQDKQFELALQLAEMKDDSDSEKRQQIH---HIKNLFAF 339
Query: 348 YLFDTGSYEEAMEHFLASQVDITYALSLYPSIVLP 382
LF ++E+M+ F D T+ + LYP + LP
Sbjct: 340 NLFCQKRFDESMQVFAKLGTDPTHVMGLYPDL-LP 373
Score = 248 (92.4 bits), Expect = 2.1e-53, Sum P(3) = 2.1e-53
Identities = 74/236 (31%), Positives = 120/236 (50%)
Query: 532 NYCDVKICEEILQKKNHYTALLELYKSNARHREALKLLHELVEESKSNQSQDEHTQKFNP 591
N+C ++ E +L+K + Y+ L+ LY+ H +AL++L + + K+N H
Sbjct: 470 NHCHIEESEHVLKKAHKYSELIILYEKKGLHEKALQVLVD--QSKKANSPLKGH------ 521
Query: 592 ESIIEYLKPLCGTDPMLVLEFSMLVLESCPTQTIELFLSG-----NIPADLVNSYLKQYS 646
E ++YL+ L + LV +S+ VL P +++F +P D V S+L +
Sbjct: 522 ERTVQYLQHLGAENLHLVFSYSVWVLRDFPEDGLKIFTEDLPEVEALPRDKVLSFLIENF 581
Query: 647 PSMQGRYLELMLAMNENSISGNLQNEMVQIY-------LSEVLDWY-SDLSAQQKWDEKA 698
S+ YLE ++ + E + + N ++Q+Y + E L+ + +D S +E
Sbjct: 582 KSLAIPYLEHIIHVWEET-GAHFHNCLIQLYCEKVQGLMKEYLNSFPADKSPVPAGEEGG 640
Query: 699 -YSPTRKKLLSALESISGYNPEVLLKRLPADALYEERAILLGKMNQHELALSLYVH 753
RKKLL LE S Y P L+ P D L EERA+LLG+M +HE AL +YVH
Sbjct: 641 DLGDYRKKLLLFLEKSSCYEPSRLISDFPFDGLLEERALLLGRMGKHEQALFIYVH 696
Score = 45 (20.9 bits), Expect = 2.1e-53, Sum P(3) = 2.1e-53
Identities = 8/17 (47%), Positives = 14/17 (82%)
Query: 442 MALIKFLQKKRSSIIEK 458
+ALI +L +KRS +++K
Sbjct: 399 LALIDYLTQKRSQLVKK 415
Score = 45 (20.9 bits), Expect = 2.9e-32, Sum P(3) = 2.9e-32
Identities = 12/32 (37%), Positives = 15/32 (46%)
Query: 731 YEERAILLGKMNQHELALSLYVHKVFLINQPV 762
Y E IL K HE AL + V + N P+
Sbjct: 487 YSELIILYEKKGLHEKALQVLVDQSKKANSPL 518
Score = 41 (19.5 bits), Expect = 7.5e-32, Sum P(3) = 7.5e-32
Identities = 11/38 (28%), Positives = 18/38 (47%)
Query: 537 KICEEILQKKNHYTALLELYKSNARHREALKLLHELVE 574
K+ EE QKK L L + + ++LH+ V+
Sbjct: 791 KVLEENAQKKRFNQVLKNLLHAEFLRVQEERILHQQVK 828
Score = 37 (18.1 bits), Expect = 1.9e-31, Sum P(3) = 1.9e-31
Identities = 21/93 (22%), Positives = 42/93 (45%)
Query: 663 NSISGNLQNEMVQIYLSEVLDWYSDLSAQQKWDEKAYSPTRKKLLSALESISGYNPEVLL 722
N + N Q ++I+L +VL+ +AQ+K ++ K LL A E + +L
Sbjct: 774 NLLPANTQISEIRIFLEKVLEE----NAQKK----RFNQVLKNLLHA-EFLRVQEERILH 824
Query: 723 KRLPADALYEERAILLGKMNQHELALSLYVHKV 755
+++ + EE+ + K A + Y + +
Sbjct: 825 QQVKC-IITEEKVCTVCKKKIGNSAFARYPNAI 856
>DICTYBASE|DDB_G0279169 [details] [associations]
symbol:vps39 "citron-like domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005083 "small
GTPase regulator activity" evidence=IEA] [GO:0042144 "vacuole
fusion, non-autophagic" evidence=ISS] [GO:0030897 "HOPS complex"
evidence=ISS] [GO:0017112 "Rab guanyl-nucleotide exchange factor
activity" evidence=ISS] [GO:0007033 "vacuole organization"
evidence=ISS] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR000547 InterPro:IPR001180
Pfam:PF00637 Pfam:PF00780 PROSITE:PS50219 dictyBase:DDB_G0279169
GO:GO:0006886 GO:GO:0016192 SUPFAM:SSF50978
GenomeReviews:CM000152_GR GO:GO:0030897 GO:GO:0017112
EMBL:AAFI02000029 GO:GO:0042144 InterPro:IPR019453 Pfam:PF10367
InterPro:IPR019452 Pfam:PF10366 eggNOG:NOG241434 OMA:CLGPIKM
RefSeq:XP_001732990.1 PRIDE:B0G127 EnsemblProtists:DDB0234136
GeneID:8621905 KEGG:ddi:DDB_G0279169 ProtClustDB:CLSZ2501702
Uniprot:B0G127
Length = 851
Score = 290 (107.1 bits), Expect = 2.2e-42, Sum P(2) = 2.2e-42
Identities = 100/393 (25%), Positives = 184/393 (46%)
Query: 4 NAFDSLELISNCSPKIDAVASYGLK----ILLGCSDGSLKIYSPGSSESDRSPPSDYQSL 59
NAF S L +I+ + + K + +G ++G + +Y E+
Sbjct: 7 NAFVSQNLFDKFPQRIECIEQWEYKGKKHLFIGTTEGHVLVYDVIEKENQHG-------- 58
Query: 60 RKESYELERTISGFSKKPILSMEVLASRQLLLSLSES-IAFHRLPNLETIAVLT--KAKG 116
+ + R SKKPI M + LL L++ + + L + +T KAKG
Sbjct: 59 NIQVSVIIRDTKLVSKKPITQMSIFDDYNKLLVLTDGDLKVYDLIQFDVTTGITLMKAKG 118
Query: 117 ANVYSWDDRRGFLCF--ARQKRVCIFRHDGGRGFVEVKDFGVPDTVKSMSWCGENICIAI 174
+ Y+ + G L A +K++ ++ DG F E+K+F +PD K + + G I +
Sbjct: 119 CSTYAVSYQPGSLSLVAAVKKKLVLYGWDGS-DFYELKEFNMPDIAKHIDYRGNFIIVCF 177
Query: 175 RKGYMILNATNGALSEVFPSGRIGXXXXXXXXXXXXXXXXXNIGVFVDQNGKLLQADRIC 234
+K Y I+N +G++ V + ++ ++ F++ G ++ I
Sbjct: 178 KKVYNIINTQDGSVINV-DADKL--TFTTFLQENEFLMVKGSMSFFINTAGNPVRRHSIT 234
Query: 235 WSEAPIAVIIQKPYAIALLPRRVEVRSL---RVPYALIQTIVLQNVRHLIPSSNAVVVAL 291
W +AP ++ I +P+AI++ PR VEV+ L P + Q++ L + I + + V+
Sbjct: 235 WQDAPSSMSIYQPFAISIEPRLVEVQILPDPNDPKTISQSLFLPACKS-ISAKRDIYVSS 293
Query: 292 ENSIFGLFPVPLGAQIVQLTASGDFEEALALCKLLPPEDASLRAAKEGSIHIRF--AHYL 349
SI+ L P+P+ + Q+ ++E A+ L L +D + KE I I+ A++L
Sbjct: 294 ATSIWRLQPLPILDLVDQMVTKQEYETAINL--LQTSKDI-IPGIKERLIKIKTSAAYHL 350
Query: 350 FDTGSYEEAMEHFLASQVDITYALSLYPSIVLP 382
F ++ AM +F+++QVD +SLYP + LP
Sbjct: 351 FSKEQFQAAMGYFISAQVDPLKIISLYPGL-LP 382
Score = 245 (91.3 bits), Expect = 2.2e-42, Sum P(2) = 2.2e-42
Identities = 75/239 (31%), Positives = 116/239 (48%)
Query: 532 NYCDVKICEEILQKKNHYTALLELYKSNARHREALKLLHELVEESKSNQSQDEHTQKFNP 591
N+C ++ E +L ++ T L+ YKS HR+AL LL +KS+ +P
Sbjct: 463 NHCHIEESERVLLEEKKLTELILFYKSKDLHRKALTLL------AKSSN--------ISP 508
Query: 592 ESIIEYLKPLCGTDPMLVLEFSMLVLESCPTQTIELFLSGN---IPADLVNSYLKQYSPS 648
I YL L ++LE S VL+ CP +++F + D V +LKQ +PS
Sbjct: 509 NDTISYLSQLGEKHIGIILEHSKWVLQKCPEDALKIFTVDRKDPLSPDDVIPHLKQCAPS 568
Query: 649 MQGRYLELML--AMNENSISGNLQNEMVQIYLSEVLDWYSDLSAQQKWDEKAYSPT---- 702
+ YLE ++ ++ N + N++V YL +L+ E P
Sbjct: 569 LLRPYLEHIINDPISPNK-NPEYHNQLVFEYLGSILELIKQTPNSAIVREPGLIPAGKES 627
Query: 703 ------RKKLLSALESISGYNPEVLLKRLPADALYEERAILLGKMNQHELALSLYVHKV 755
R K++ LE+ Y PE +L R P++ LYEERAILL K+ +HE AL++Y HK+
Sbjct: 628 GELGELRTKIIQFLENSKYYLPEKMLSRFPSNDLYEERAILLSKIGRHEQALAIYAHKL 686
Score = 39 (18.8 bits), Expect = 3.9e-20, Sum P(3) = 3.9e-20
Identities = 10/37 (27%), Positives = 19/37 (51%)
Query: 424 ELDENATLKSKKMSHNTLMALIKFLQKKRSSIIEKAT 460
E E L+ KK++ L K L +K +++ K++
Sbjct: 468 EESERVLLEEKKLTELILFYKSKDLHRKALTLLAKSS 504
Score = 37 (18.1 bits), Expect = 3.9e-20, Sum P(3) = 3.9e-20
Identities = 7/24 (29%), Positives = 14/24 (58%)
Query: 533 YCDVKICEEILQKKNHYTALLELY 556
YCD ++ + ++ Y +LL +Y
Sbjct: 695 YCDRHYNKDSEESRDVYLSLLNVY 718
>RGD|1304858 [details] [associations]
symbol:Vps39 "vacuolar protein sorting 39 homolog (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0005515 "protein
binding" evidence=IPI] [GO:0030897 "HOPS complex" evidence=ISO]
InterPro:IPR001180 Pfam:PF00780 PROSITE:PS50219 RGD:1304858
GO:GO:0005083 eggNOG:NOG241434 HOGENOM:HOG000046531
HOVERGEN:HBG056493 UniGene:Rn.1508 EMBL:BC087048 IPI:IPI00957852
STRING:Q5PQS9 UCSC:RGD:1304858 Genevestigator:Q5PQS9 Uniprot:Q5PQS9
Length = 492
Score = 414 (150.8 bits), Expect = 3.5e-40, Sum P(2) = 3.5e-40
Identities = 122/396 (30%), Positives = 205/396 (51%)
Query: 2 VHNAFDSLELISNCSPKIDAVASYGLKILLGCSDGSLKIYSPGSSESDRSPPSDYQSLRK 61
+H+AF+ + ++ +ID +A++ +L+G G L +Y D R
Sbjct: 1 MHDAFEPVPILEKLPLQIDCLAAWEEWLLVGTKQGHLLLYRIRK---------DVGCNRF 51
Query: 62 ESYELERTISGFSKKPILSMEVLASRQLLLSLSES-IAFHRLPNLETIAVLTKAKGANVY 120
E LE++ FSKK I + V++ ++L+SL E+ I H L + I ++KAKGA+++
Sbjct: 52 E-VTLEKSNKNFSKK-IQQIHVVSQFKILVSLLENNIYVHDLLTFQQITTVSKAKGASLF 109
Query: 121 SWD---DRRGF----LCFARQKRVCI-FRHDGGRGFVEVK-DFGVPDTVKSMSWCGENIC 171
+ D G +C A +K++ + F D R F E++ DF VPD KSM+WC +IC
Sbjct: 110 TCDLQHTETGEEVLRMCVAVRKKLQLYFWKD--REFHELQGDFSVPDVPKSMAWCENSIC 167
Query: 172 IAIRKGYMILNA-TNGALSEVFPSGRIGXXXXXXXXXXXXXXXXXNIGVFVDQNGKLLQA 230
+ ++ Y ++ G++ E+FP+G+ ++ V +++ G Q
Sbjct: 168 VGFKRDYYLIRVDAKGSIKELFPTGKQLEPLVAPLADGKVAVGQDDLTVVLNEEGICTQK 227
Query: 231 DRICWSEAPIAVIIQKPYAIALLPRRVEVRSLRVPYALIQTIVLQNVRHLIPS-SNAVVV 289
+ W++ P+A+ Q PY +A+LPR VE+R+L P L+Q+I LQ R + SN + V
Sbjct: 228 CALNWTDIPVAMEHQPPYIVAVLPRYVEIRTLE-PRLLVQSIELQRPRFITSGGSNIIYV 286
Query: 290 ALENSIFGLFPVPLGAQIVQLTASGDFEEALALCKLLPPEDASLRAAKEGSIH-IR--FA 346
A + ++ L PVP+ QI QL FE AL L ++ D+ K+ IH I+ +A
Sbjct: 287 ASNHFVWRLIPVPMATQIQQLLQDKQFELALQLAEMKDDSDSE----KQQQIHHIKNLYA 342
Query: 347 HYLFDTGSYEEAMEHFLASQVDITYALSLYPSIVLP 382
LF ++E+M+ F D T+ + LYP + LP
Sbjct: 343 FNLFCQKRFDESMQVFAKLGTDPTHVMGLYPDL-LP 377
Score = 45 (20.9 bits), Expect = 3.5e-40, Sum P(2) = 3.5e-40
Identities = 8/17 (47%), Positives = 14/17 (82%)
Query: 442 MALIKFLQKKRSSIIEK 458
+ALI +L +KRS +++K
Sbjct: 403 LALIDYLTQKRSQLVKK 419
>FB|FBgn0038593 [details] [associations]
symbol:CG7146 species:7227 "Drosophila melanogaster"
[GO:0005083 "small GTPase regulator activity" evidence=IEA]
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
InterPro:IPR001180 Pfam:PF00780 PROSITE:PS50219 EMBL:AE014297
GO:GO:0005083 InterPro:IPR019453 Pfam:PF10367 InterPro:IPR019452
Pfam:PF10366 GeneTree:ENSGT00530000063596 eggNOG:NOG241434
OMA:CLGPIKM EMBL:AY060674 RefSeq:NP_650702.1 UniGene:Dm.1238
MINT:MINT-294241 EnsemblMetazoa:FBtr0083601 GeneID:42192
KEGG:dme:Dmel_CG7146 UCSC:CG7146-RA FlyBase:FBgn0038593
InParanoid:Q9VEA2 OrthoDB:EOG4GB5N4 GenomeRNAi:42192 NextBio:827606
Uniprot:Q9VEA2
Length = 876
Score = 230 (86.0 bits), Expect = 5.7e-31, Sum P(3) = 5.7e-31
Identities = 72/236 (30%), Positives = 126/236 (53%)
Query: 527 LLKGLNYCDVKICEEILQKKNHYTALLELYKSNARHREALKLLHELVEESKSNQSQDEHT 586
LL+ LN C ++ E+ L+K N + L+ LY+ +H+EALKLL E Q+ E +
Sbjct: 483 LLR-LNQCHLEESEKTLKKHNKISELIILYQMKGKHKEALKLLRE--------QASIEGS 533
Query: 587 QKFNPESIIEYLKPLCGTDPMLVLEFSMLVLESCPTQTIELFLSG-----NIP-ADLVNS 640
+ I YL+ L G L+ EF+ VL P + + +F ++P A +++
Sbjct: 534 VLQGRKRTIRYLQELGGDHLPLIFEFADWVLNDNPEEGLTIFTDELIEVESLPRAKVLDF 593
Query: 641 YLKQYSPSMQGRYLELMLAMNENSISGN--LQNEMVQIYLSEVLDWYSDLSAQQKWDE-K 697
++ ++ ++ YLE ++ ++ GN L N +++ Y +V L+ Q+K +E
Sbjct: 594 FISKHK-ALVIPYLEHVITEWKD---GNTLLHNVLLKQYREKVQRL---LAQQEKGEEVP 646
Query: 698 AYSPTRKKLLSALESISGYNPEVLLKRLPADALYEERAILLGKMNQHELALSLYVH 753
P R KL LE + Y+P+ LL+ P + L EERA++LG++ +H+ LS+Y+H
Sbjct: 647 ELIPMRAKLYKMLEESNDYSPDRLLEEFPTNILLEERALILGRLKKHDNVLSIYIH 702
Score = 143 (55.4 bits), Expect = 5.7e-31, Sum P(3) = 5.7e-31
Identities = 44/162 (27%), Positives = 78/162 (48%)
Query: 221 VDQNGKLLQADRICWSEAPIAVIIQKPYAIALLPRRVEVRSLRVPYALIQTIV-LQNVRH 279
+D N L + WS + ++ +P+A+ + +EVRSL L+QTI LQ +
Sbjct: 246 MDSNSSLTP---LLWSSPLLDLVWDEPFAVGRVNNAIEVRSLVGKDTLVQTIPELQKTKF 302
Query: 280 LIPSSNAVVVALENS-IFGLFPVPLGAQIVQLTASGDFEEALALCKLLPPEDASLRAAKE 338
L+ + + A S ++ + V + Q QL F+ A+ L ++ E A+ RA
Sbjct: 303 LVHADKGTIFAAATSELWCIRMVEIPIQRQQLLQQKKFQLAIELTQI-SDEPAADRAQTI 361
Query: 339 GSIHIRFAHYLFDTGSYEEAMEHFLASQVDITYALSLYPSIV 380
IH+ +A LF + AM+ F + +D + L+P++V
Sbjct: 362 RQIHMLYAKELFTNKEFSAAMKEFEKAAIDPYDVIRLFPNLV 403
Score = 103 (41.3 bits), Expect = 5.7e-31, Sum P(3) = 5.7e-31
Identities = 47/202 (23%), Positives = 87/202 (43%)
Query: 2 VHNAFDSLELISNCSPKIDAVASYGLKILLGCSDGSLKIYSPGSSESDRSPPSDYQSLRK 61
+H A+ S+ I +I+++A+YG ++LG G L +YS D D + K
Sbjct: 1 MHQAY-SVHSILKQGVQIESIAAYGNHVILGTRSGQLIMYSV-----DEETGVDMRMFNK 54
Query: 62 ESYELERTISGFSKKPILSMEVLASRQLLLSLSE-SIAFHRLPNLET-IAVLTKA---KG 116
FS+KPI MEV+AS LL L++ + + +E+ A + A KG
Sbjct: 55 N----------FSRKPITQMEVIASENLLFVLTDLQVQVCDIRRIESNFAFMHSAPDTKG 104
Query: 117 ANVYSWD-----DRRGFL------CFARQKRVCIFRHDGGRGFVEVKDFGVPDTVKSMSW 165
+++ D G + C A ++R+ F + + D +++ W
Sbjct: 105 CTLFTMDVDTPKSTTGRVATVIRVCCAIRRRLVFFFWKEDKLNSLELIIELSDVPRTLCW 164
Query: 166 CGENICIAIRKGYMILNATNGA 187
G +C+ + Y++ + + A
Sbjct: 165 VGHAVCVGFKDEYVVYDISGKA 186
Score = 37 (18.1 bits), Expect = 1.2e-10, Sum P(3) = 1.2e-10
Identities = 15/54 (27%), Positives = 22/54 (40%)
Query: 697 KAYSPTRKKLLSALESISGYNPEVLLKRLPADALYEERAILLGKMNQHELALSL 750
K Y T L++ L ++ + E K L E IL +H+ AL L
Sbjct: 470 KCYLQTNDSLVAPLLRLNQCHLEESEKTLKKHNKISELIILYQMKGKHKEALKL 523
>ASPGD|ASPL0000003032 [details] [associations]
symbol:avaB species:162425 "Emericella nidulans"
[GO:0007033 "vacuole organization" evidence=IMP] [GO:0005083 "small
GTPase regulator activity" evidence=IEA] [GO:0006886 "intracellular
protein transport" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0006995 "cellular response
to nitrogen starvation" evidence=IEA] [GO:0070314 "G1 to G0
transition" evidence=IEA] InterPro:IPR000547 InterPro:IPR001180
InterPro:IPR015943 Pfam:PF00637 Pfam:PF00780 PROSITE:PS50219
GO:GO:0006886 GO:GO:0016192 Gene3D:2.130.10.10 GO:GO:0005622
EMBL:BN001301 GO:GO:0005083 InterPro:IPR019453 Pfam:PF10367
InterPro:IPR019452 Pfam:PF10366 EnsemblFungi:CADANIAT00007510
OMA:YFRGRIR Uniprot:C8V1V7
Length = 1124
Score = 235 (87.8 bits), Expect = 3.2e-29, Sum P(4) = 3.2e-29
Identities = 66/236 (27%), Positives = 114/236 (48%)
Query: 527 LLKGLNYCDVKICEEILQKKNHYTALLELYKSNARHREALKLLHELVEESKSNQSQDEHT 586
L + N+CD ++ E L++ + L++ HR+AL+LL + +S ++
Sbjct: 644 LFRIANFCDPEVVMEKLEETGRHNDLIDFLYGKKMHRQALELLRKF---GQSESEEETAP 700
Query: 587 QKFNPESIIEYLKPLCGTDPMLVLEFSMLVLESCPTQTIELFLSGN-----IPADLVNSY 641
Q P+ ++ YL+ L L+LEFS + P +E+FL+ +P V +
Sbjct: 701 QLHGPKRMVAYLQHLPPEHIDLILEFSEWPIREDPDLGMEIFLADTENAETLPRQKVLDF 760
Query: 642 LKQYSPSMQGRYLELMLAMNENSISGNLQNEMVQIYLSEVLDWYSDLSAQQKWDEKAYSP 701
L+ + RYLE ++ N ++ +L + +YL+ + + DE Y
Sbjct: 761 LQGIDDKLAVRYLEHVIG-ELNDLTPDLHQRLAVLYLNRLQKHQNSKDGFATEDE--YKF 817
Query: 702 TRKKLLSALESISGYNPEVLLKRLPAD--ALYEERAILLGKMNQHELALSLYVHKV 755
R+KL++ L++ Y+P +L RL D +E RAIL KM QH AL +YV K+
Sbjct: 818 WREKLITMLKTSDQYSPSKILARLDRDDPEFFEARAILFSKMGQHRQALEIYVFKL 873
Score = 130 (50.8 bits), Expect = 3.2e-29, Sum P(4) = 3.2e-29
Identities = 54/188 (28%), Positives = 85/188 (45%)
Query: 220 FVDQNGKLLQADRICWSEAPIAVIIQKPYAIALLPRRVEVRSLRVP--YALIQTIVLQNV 277
F D +G L +I WS AP + P+ +AL + +R P +L+Q+I L +
Sbjct: 296 FTDIDGNSLGRRQIPWSSAPADIGYSYPFLLALHDSMKGILEVRNPETLSLLQSISLPSA 355
Query: 278 R--HLI-PS------SNAVVVALENSIFGLFPVPLGAQIVQLTASGDFEEALALCKLLPP 328
H+ P+ +VA + I+ + + +QI L G +EA++L +L
Sbjct: 356 STMHIAQPTISLAHAGKGFLVASDRIIWRMEALGYDSQIDSLVEKGYLDEAISLAGML-- 413
Query: 329 EDASLRAAKEGSIH-IRF--AHYLFDTGSYEEAMEHFLASQVDITYALSLYPSIVLPKTT 385
EDA L+ KEG I I+ A +F Y E+ME F + LYP I+ T
Sbjct: 414 EDALLKN-KEGRIREIKLEKAEGMFRLRRYLESMELFTEVSAPPETVIQLYPRIIAGDLT 472
Query: 386 VVPEPERL 393
+ E + L
Sbjct: 473 SISEEDEL 480
Score = 73 (30.8 bits), Expect = 3.2e-29, Sum P(4) = 3.2e-29
Identities = 16/49 (32%), Positives = 29/49 (59%)
Query: 9 LELISNCSPKIDAVASYGLKILLGCSDGSLKIYSPGS----SESDRSPP 53
+EL +I+AV +YG ++L+G ++G+L++Y +E D PP
Sbjct: 11 VELKPRDKSRIEAVLAYGDRVLVGLNNGNLRVYRVNEVEIEAEHDADPP 59
Score = 69 (29.3 bits), Expect = 3.2e-29, Sum P(4) = 3.2e-29
Identities = 18/58 (31%), Positives = 31/58 (53%)
Query: 65 ELERTISGFSKKPILSMEVLASRQLLLSLSES-IAFHRLPNLETIAVLTKAKGANVYS 121
+L R + FS+ I + ++ +LL+SLS ++ H L E LT+ KGA ++
Sbjct: 99 DLLRELEKFSRYKIEQLAIIKEAKLLVSLSGGYVSIHDLQTYELQEQLTRTKGAVAFA 156
>ZFIN|ZDB-GENE-070410-66 [details] [associations]
symbol:tgfbrap1 "transforming growth factor, beta
receptor associated protein 1" species:7955 "Danio rerio"
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0005083
"small GTPase regulator activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR000547 InterPro:IPR001180
Pfam:PF00637 Pfam:PF00780 PROSITE:PS50219 ZFIN:ZDB-GENE-070410-66
GO:GO:0006886 GO:GO:0016192 GO:GO:0005622 GO:GO:0005083
InterPro:IPR019453 Pfam:PF10367 InterPro:IPR019452 Pfam:PF10366
OMA:VQLWVNI GeneTree:ENSGT00530000063596 EMBL:CR936426
IPI:IPI00845960 Ensembl:ENSDART00000087797 Bgee:F1QP13
Uniprot:F1QP13
Length = 863
Score = 229 (85.7 bits), Expect = 6.6e-24, Sum P(2) = 6.6e-24
Identities = 91/330 (27%), Positives = 149/330 (45%)
Query: 75 KKPILSMEVLASRQLLLSLSES-IAFHRLPNLETIAVL-TKAKGANVYSWDDR--RG-FL 129
KKP++ ++ ++ + L+ L +S I + LE + K KG + ++ G
Sbjct: 75 KKPVVELKAASALERLIVLCDSAITVVDMVTLEPVPTGGAKLKGVTAFCINENPVTGDAF 134
Query: 130 C------FARQK--RVCIFRHDGGRGFVEVKDFGVPDTVKSMSWCGENICIAIRKGYMIL 181
C AR++ ++C D + EV P+ ++S G NIC+A+ YMIL
Sbjct: 135 CVEMAVVLARRRAVQICTVHEDRVQMLKEVT---TPEQPCALSLDGYNICLALSTQYMIL 191
Query: 182 NATNGALSEVFPSG--RIGXXXXXXXXXXXXXXXXXNIGVFVDQNGKLLQADRICWSEAP 239
N + GA ++FP +G+F + G + Q + WSE
Sbjct: 192 NYSTGASQDLFPYDCEERKPIVKRIGREEFLLAAPGGLGMFANAEG-ISQRAPVSWSENV 250
Query: 240 IAVIIQKPYAIALLPRRVEVRSLRVPYALIQTIVLQNVRHLIPSSNAVVVALENSIFGLF 299
IA + PY +AL V V S+ + L QT+ ++ + L VVVA +++ L
Sbjct: 251 IAAAVCFPYVVALDEGFVTVHSM-LDQQLKQTLSFRDGQLLQDFEGKVVVASSKAVYMLV 309
Query: 300 PVPLGAQIVQLTASGDFEEALALCKLLPPEDASLRAAKEGSIHIRF---AHYL-FDTGSY 355
P+PL QI L S EEAL L + ++ K +H R A ++ F +
Sbjct: 310 PLPLERQIQDLLTSHRVEEALTLTEAA---QRNIPKEKYQILHRRILQQAGFIQFGQLQF 366
Query: 356 EEAMEHFLASQVDITYALSLYPSIVLPKTT 385
EA EHF Q+D+ +SLYP ++LP ++
Sbjct: 367 LEAKEHFRKGQLDVRELISLYP-LLLPASS 395
Score = 133 (51.9 bits), Expect = 6.6e-24, Sum P(2) = 6.6e-24
Identities = 59/239 (24%), Positives = 110/239 (46%)
Query: 526 ELLKGLNYCDVKICEEILQKKNHYTALLELYKSNARHREALKLLHELVEESKSNQSQDEH 585
+LL N C + L+K + Y AL LY N + AL++ ++V N +
Sbjct: 466 DLLASENACLLADSAPWLEKHHKYYALGLLYHYNGQDAAALQMWVKIV-----NGDLQDS 520
Query: 586 TQKFNPESIIEYLKPLCGTDPMLVLEFSMLVLESCPTQTIELFLS--------GNIPADL 637
T+ E ++++L D LV ++ L+ +++F G + AD
Sbjct: 521 TRPDLFEYVVDFLSFCSNLD--LVWRYADWALQKDQKIGVQIFTKRPTSEERRGQLNADD 578
Query: 638 VNSYLKQYSPSMQGRYLELMLAMNENSISGNLQNEMVQIYLSEVLDWYSDLSAQQKWDEK 697
V +YL+++S ++ +LE L + + + +Y VL L ++ E+
Sbjct: 579 VITYLQKHSQALL-LFLE-HLVLEKKLQKEKYHTNLAVLYAERVLG----LISRPSTSEE 632
Query: 698 AYSPTRKKLLSALESISGYNPEVLLKRLP-ADALYEERAILLGKMNQHELALSLYVHKV 755
S R+KL L+ + Y ++LL ++ ++ L ERA L GK+ +H+ AL + VH++
Sbjct: 633 QLSAARQKLQRLLKESNLYRVQLLLGKIQDSELLLLERATLHGKLEEHDKALHVLVHQL 691
Score = 48 (22.0 bits), Expect = 9.2e-05, Sum P(2) = 9.2e-05
Identities = 13/45 (28%), Positives = 24/45 (53%)
Query: 425 LDENATLKSKKMSHNTLMALIKFLQKKRSSIIEKATAEGTEEVVL 469
L+E+ T K K ++ N L K+L K+ ++E A E +++
Sbjct: 50 LEEHTTAKGK-LAFNAQKLLHKYLGLKKP-VVELKAASALERLIV 92
Score = 45 (20.9 bits), Expect = 9.7e-15, Sum P(2) = 9.7e-15
Identities = 11/37 (29%), Positives = 17/37 (45%)
Query: 569 LHELVEESKSNQSQDEHTQKFNPESIIEYLKPLCGTD 605
LHE + + Q E Q+F +I YL + +D
Sbjct: 404 LHEFADLNHLTQGDQEKVQRFK-RFLISYLHEVRSSD 439
Score = 44 (20.5 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 31/142 (21%), Positives = 61/142 (42%)
Query: 538 ICEEILQKKNHYTALLELYKSNARHREALKLLHELVEESKSNQSQDEHTQKFNPESIIEY 597
+ E+ LQK+ ++T L LY L L+ + + + Q+ ES +
Sbjct: 598 VLEKKLQKEKYHTNLAVLYAERV-----LGLISRPSTSEEQLSAARQKLQRLLKESNLYR 652
Query: 598 LKPLCGTDPMLVLEFSMLVLESCPTQTIELFLSGNIPA-DLVNSYLKQYSPSMQGRYLEL 656
++ L G + + +L+LE T+ L + A ++ LK S + + Y
Sbjct: 653 VQLLLGK----IQDSELLLLERA---TLHGKLEEHDKALHVLVHQLKDSSAAEE--YCSW 703
Query: 657 MLAMNENSISGNLQNEMVQIYL 678
A ++S NL ++++ +YL
Sbjct: 704 ASASQDSSYRQNLFHQLLSVYL 725
Score = 43 (20.2 bits), Expect = 1.6e-14, Sum P(2) = 1.6e-14
Identities = 17/59 (28%), Positives = 27/59 (45%)
Query: 527 LLKGLNYCDVKICEEILQKKNHYTALLELYKSNARHREALKLLHELVEESKSNQSQDEH 585
LLK N V++ +Q LLE + + E K LH LV + K + + +E+
Sbjct: 644 LLKESNLYRVQLLLGKIQDSE--LLLLERATLHGKLEEHDKALHVLVHQLKDSSAAEEY 700
>UNIPROTKB|Q8WUH2 [details] [associations]
symbol:TGFBRAP1 "Transforming growth factor-beta
receptor-associated protein 1" species:9606 "Homo sapiens"
[GO:0005083 "small GTPase regulator activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005160 "transforming growth factor
beta receptor binding" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0007165 "signal transduction"
evidence=IDA] [GO:0046332 "SMAD binding" evidence=IDA] [GO:0007179
"transforming growth factor beta receptor signaling pathway"
evidence=TAS] [GO:0016020 "membrane" evidence=IDA]
InterPro:IPR000547 InterPro:IPR001180 Pfam:PF00637 Pfam:PF00780
PROSITE:PS50219 GO:GO:0005737 GO:GO:0006886 GO:GO:0016020
GO:GO:0006355 GO:GO:0016192 GO:GO:0005160 EMBL:CH471127
GO:GO:0046332 GO:GO:0007179 GO:GO:0005083 EMBL:AC012360
InterPro:IPR019453 Pfam:PF10367 CTD:9392 eggNOG:NOG254275
HOGENOM:HOG000007291 HOVERGEN:HBG108563 OrthoDB:EOG4GTKC8
InterPro:IPR019452 Pfam:PF10366 EMBL:AF022795 EMBL:AK291382
EMBL:BC020548 IPI:IPI00550891 PIR:T08622 RefSeq:NP_001136093.1
RefSeq:NP_004248.2 UniGene:Hs.446350 ProteinModelPortal:Q8WUH2
IntAct:Q8WUH2 STRING:Q8WUH2 PhosphoSite:Q8WUH2 DMDM:74730711
PaxDb:Q8WUH2 PRIDE:Q8WUH2 DNASU:9392 Ensembl:ENST00000258449
Ensembl:ENST00000393359 GeneID:9392 KEGG:hsa:9392 UCSC:uc002tcq.3
GeneCards:GC02M105880 HGNC:HGNC:16836 HPA:HPA038397 MIM:606237
neXtProt:NX_Q8WUH2 PharmGKB:PA134963946 InParanoid:Q8WUH2
OMA:VQLWVNI PhylomeDB:Q8WUH2 GenomeRNAi:9392 NextBio:35191
ArrayExpress:Q8WUH2 Bgee:Q8WUH2 CleanEx:HS_TGFBRAP1
Genevestigator:Q8WUH2 Uniprot:Q8WUH2
Length = 860
Score = 200 (75.5 bits), Expect = 4.7e-23, Sum P(2) = 4.7e-23
Identities = 92/338 (27%), Positives = 148/338 (43%)
Query: 65 ELERTISGFSKKPILSMEVLASRQLLLSLSE-SIAFHRLPNLETIAVLTKAKGANVYSWD 123
+L+R + GF KKP+ + ++ LL L + SI+ + NLE + + KGA ++ +
Sbjct: 68 QLQRHL-GF-KKPVNELRAASALNRLLVLCDNSISLVNMLNLEPVPSGARIKGAATFALN 125
Query: 124 DR--RG--F---LCFARQKRVCIFRHDGGRGFVE-VKDFGVPDTVKSMSWCGENICIAIR 175
+ G F +C KR I V+ VK+ + +++ G +C+A+
Sbjct: 126 ENPVSGDPFCVEVCIISVKRRTIQMFLVYEDRVQIVKEVSTAEQPLAVAVDGHFLCLALT 185
Query: 176 KGYMILNATNGALSEVFP--SGRIGXXXXXXXXXXXXXXXXXNIGVFVDQNGKLLQADRI 233
Y+I N + G ++FP S +G+F G + Q +
Sbjct: 186 TQYIIHNYSTGVSQDLFPYCSEERPPIVKRIGRQEFLLAGPGGLGMFATVAG-ISQRAPV 244
Query: 234 CWSEAPIAVIIQKPYAIALLPRRVEVRSLRVPYALIQTIVLQNVRHLIPSSNAVVVALEN 293
WSE I + PY IAL + V S+ + QT+ + L V+VA
Sbjct: 245 HWSENVIGAAVSFPYVIALDDEFITVHSM-LDQQQKQTLPFKEGHILQDFEGRVIVATSK 303
Query: 294 SIFGLFPVPLGAQIVQLTASGDFEEALALCK----LLPPEDASL--RAAKEGSIHIRFAH 347
++ L P+PL QI L AS EEAL L K +P E + R + + I+FA
Sbjct: 304 GVYILVPLPLEKQIQDLLASRRVEEALVLAKGARRNIPKEKFQVMYRRILQQAGFIQFAQ 363
Query: 348 YLFDTGSYEEAMEHFLASQVDITYALSLYPSIVLPKTT 385
F EA E F + Q+D+ +SLYP +LP ++
Sbjct: 364 LQF-----LEAKELFRSGQLDVRELISLYP-FLLPTSS 395
Score = 155 (59.6 bits), Expect = 4.7e-23, Sum P(2) = 4.7e-23
Identities = 69/239 (28%), Positives = 107/239 (44%)
Query: 526 ELLKGLNYCDVKICEEILQKKNHYTALLELYKSNARHREALKLLHELVEESKSNQSQDEH 585
+LL N+C + L+K Y AL LY N + A++L +V N +
Sbjct: 466 DLLVTENFCLLTDSAAWLEKHKKYFALGLLYHYNNQDAAAVQLWVNIV-----NGDVQDS 520
Query: 586 TQKFNPESIIEYLKPLCGTDPMLVLEFSMLVLESCPTQTIELFLSGNI---------PAD 636
T+ E I+++L C D LV ++ VL+ +++F + P D
Sbjct: 521 TRSDLYEYIVDFLT-YC-LDEELVWAYADWVLQKSEEVGVQVFTKRPLDEQQKNSFNPDD 578
Query: 637 LVNSYLKQYSPSMQGRYLELMLAMNENSISGNLQNEMVQIYLSEVLDWYSDLSAQQKWDE 696
++N LK+Y P +YLE L +++ + +YL EVL SA K E
Sbjct: 579 IINC-LKKY-PKALVKYLE-HLVIDKRLQKEEYHTHLAVLYLEEVL--LQRASASGKGAE 633
Query: 697 KAYSPTRKKLLSALESISGYNPEVLLKRLPADALYEERAILLGKMNQHELALSLYVHKV 755
+ T+ KL L+ Y LL+RL L E AIL GK+ +HE AL + VH++
Sbjct: 634 A--TETQAKLRRLLQKSDLYRVHFLLERLQGAGLPMESAILHGKLGEHEKALHILVHEL 690
Score = 40 (19.1 bits), Expect = 4.3e-11, Sum P(2) = 4.3e-11
Identities = 15/62 (24%), Positives = 32/62 (51%)
Query: 685 YSDLSAQQKWDEKAYSPTRKKLLSALESI------SGYNPEV--LLKRLPADALYEERAI 736
Y+DL+ + D++ + ++ L+S L + +GY ++ L +L A+A ++
Sbjct: 407 YADLNQLTQGDQEKMAKCKRFLMSYLNEVRSTEVANGYKEDIDTALLKLYAEADHDSLLD 466
Query: 737 LL 738
LL
Sbjct: 467 LL 468
>UNIPROTKB|I3LIP2 [details] [associations]
symbol:TGFBRAP1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046332 "SMAD binding" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005160 "transforming growth
factor beta receptor binding" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005083 "small
GTPase regulator activity" evidence=IEA] InterPro:IPR000547
InterPro:IPR001180 Pfam:PF00637 Pfam:PF00780 PROSITE:PS50219
GO:GO:0007165 GO:GO:0006886 GO:GO:0016020 GO:GO:0006355
GO:GO:0016192 GO:GO:0005622 GO:GO:0005083 InterPro:IPR019453
Pfam:PF10367 InterPro:IPR019452 Pfam:PF10366 OMA:VQLWVNI
GeneTree:ENSGT00530000063596 EMBL:FP326708 RefSeq:XP_003354755.2
Ensembl:ENSSSCT00000024727 GeneID:100625522 KEGG:ssc:100625522
Uniprot:I3LIP2
Length = 859
Score = 190 (71.9 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 90/339 (26%), Positives = 149/339 (43%)
Query: 65 ELERTISGFSKKPILSMEVLASRQLLLSLSES-IAFHRLPNLETIAVLTKAKGANVYSWD 123
+L R + GF KK + + ++ LL L + I+ + +LE + + KGA ++ +
Sbjct: 68 QLHRHL-GF-KKAVNELRAASALSRLLVLCDGCISLVHMLSLEPVPSGARIKGAAAFALN 125
Query: 124 DR--RG--F---LCFARQKR--VCIFRHDGGRGFVEVKDFGVPDTVKSMSWCGENICIAI 174
+ G F +C KR + +F R + V++ P+ +++ G +C+A+
Sbjct: 126 ENPVSGDPFCVEVCIISVKRRTIQVFLVYEDRVQI-VREVSTPEQPLAVAVDGHFLCLAL 184
Query: 175 RKGYMILNATNGALSEVFP--SGRIGXXXXXXXXXXXXXXXXXNIGVFVDQNGKLLQADR 232
Y+ILN + GA ++FP S +G+F G + Q
Sbjct: 185 STQYIILNYSTGASQDLFPYCSEEKRPIVKRIGRQEFLLAGPGGLGMFATVAG-ISQRAP 243
Query: 233 ICWSEAPIAVIIQKPYAIALLPRRVEVRSLRVPYALIQTIVLQNVRHLIPSSNAVVVALE 292
+ WSE I + PY IAL + V S+ + QT+ + L V+VA
Sbjct: 244 VHWSENVIGAAVCFPYVIALDDEFITVHSM-LDQQQKQTLPFKEGHILQDFEGRVIVATN 302
Query: 293 NSIFGLFPVPLGAQIVQLTASGDFEEALALCK----LLPPEDASL--RAAKEGSIHIRFA 346
++ L P PL Q+ L AS EEAL L K +P E + R + + I+FA
Sbjct: 303 KGVYILVPRPLEEQVQGLLASHRVEEALVLAKGARRNIPKEKFQVMYRRVLQQAGFIQFA 362
Query: 347 HYLFDTGSYEEAMEHFLASQVDITYALSLYPSIVLPKTT 385
F EA E F + Q+D+ +SLYP +LP ++
Sbjct: 363 QLQF-----LEAKELFRSGQLDVRELISLYP-FLLPTSS 395
Score = 161 (61.7 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 67/237 (28%), Positives = 103/237 (43%)
Query: 526 ELLKGLNYCDVKICEEILQKKNHYTALLELYKSNARHREALKLLHELVEESKSNQSQDEH 585
+LL N+C + L+K Y AL LY N + A++L +V N +
Sbjct: 466 DLLVTENFCLLTDSAAWLEKHKKYFALGLLYHYNKQDAAAVQLWVNIV-----NGDVQDA 520
Query: 586 TQKFNPESIIEYLKPLCGTDPMLVLEFSMLVLESCPTQTIELFLS-------GNIPADLV 638
T+ E ++++L DP LV ++ VL+ +++F G+ D +
Sbjct: 521 TRSDLYEYVVDFLT--YSLDPDLVWTYADWVLQKSQEVGVQVFTKRPLDDQQGSFNPDDI 578
Query: 639 NSYLKQYSPSMQGRYLELMLAMNENSISGNLQNEMVQIYLSEVLDWYSDLSAQQKWDEKA 698
+ LK+Y P +YLE L M+ + +YL EVL +A A
Sbjct: 579 ITCLKKY-PRALVKYLE-HLVMDRRLQREEYHTHLAMLYLDEVLQQKPGANATGA----A 632
Query: 699 YSPTRKKLLSALESISGYNPEVLLKRLPADALYEERAILLGKMNQHELALSLYVHKV 755
+ TR KL L+ Y LL R+ L E AIL GK+ QHE AL + VH++
Sbjct: 633 VTETRAKLRHLLQKSDSYRVHFLLDRIRGAGLPMESAILHGKLEQHEDALRILVHEL 689
Score = 40 (19.1 bits), Expect = 5.1e-10, Sum P(2) = 5.1e-10
Identities = 16/62 (25%), Positives = 32/62 (51%)
Query: 685 YSDLSAQQKWDEKAYSPTRKKLLSALESI------SGYNPEV--LLKRLPADALYEERAI 736
Y+DL+ + D++ + ++ L+S L + +GY +V L +L A+A ++
Sbjct: 407 YADLNQLTQGDQEKVTRCKRFLMSYLNEVRSTEMANGYKEDVDTALLKLYAEADHDSLLD 466
Query: 737 LL 738
LL
Sbjct: 467 LL 468
>UNIPROTKB|F1MWF9 [details] [associations]
symbol:TGFBRAP1 "Transforming growth factor-beta
receptor-associated protein 1" species:9913 "Bos taurus"
[GO:0046332 "SMAD binding" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005160 "transforming growth factor beta receptor
binding" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0005083 "small GTPase regulator activity"
evidence=IEA] InterPro:IPR000547 InterPro:IPR001180 Pfam:PF00637
Pfam:PF00780 PROSITE:PS50219 GO:GO:0007165 GO:GO:0006886
GO:GO:0016020 GO:GO:0006355 GO:GO:0016192 GO:GO:0005622
GO:GO:0005083 InterPro:IPR019453 Pfam:PF10367 IPI:IPI00866966
UniGene:Bt.5257 InterPro:IPR019452 Pfam:PF10366 OMA:VQLWVNI
GeneTree:ENSGT00530000063596 EMBL:DAAA02030310
Ensembl:ENSBTAT00000028967 Uniprot:F1MWF9
Length = 859
Score = 199 (75.1 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
Identities = 87/337 (25%), Positives = 149/337 (44%)
Query: 65 ELERTISGFSKKPILSMEVLASRQLLLSLSES-IAFHRLPNLETIAVLTKAKGANVYSWD 123
+L R + GF KK + + ++ LL L + I+ + +LE + + KGA ++ +
Sbjct: 68 QLHRHL-GF-KKAVSELRAASALSRLLVLCDGCISLVHMLSLEPVPSGARIKGATAFALN 125
Query: 124 DR--RG--F---LCFARQKR--VCIFRHDGGRGFVEVKDFGVPDTVKSMSWCGENICIAI 174
+ G F +C KR + +F R + V++ P+ +++ G +C+A+
Sbjct: 126 ENPVSGDPFCVEVCIISVKRRTIQVFLVYEDRVQI-VREVSTPEQPLAVAVDGHFLCLAL 184
Query: 175 RKGYMILNATNGALSEVFP--SGRIGXXXXXXXXXXXXXXXXXNIGVFVDQNGKLLQADR 232
Y+ILN + GA ++FP S +G+F G + Q
Sbjct: 185 TTQYIILNYSTGAAQDLFPFCSEERRPIVKRIGRQEFLLAGPGGLGMFATVAG-ISQRAP 243
Query: 233 ICWSEAPIAVIIQKPYAIALLPRRVEVRSLRVPYALIQTIVLQNVRHLIPSSNAVVVALE 292
+ WSE I + PY +AL + V S+ + QT+ + L V+VA
Sbjct: 244 VRWSENVIGAAVCFPYVVALDDEFITVHSM-LDQQQKQTLPFKEGHILQDFEGRVIVATS 302
Query: 293 NSIFGLFPVPLGAQIVQLTASGDFEEALALCK----LLPPEDASLRAAKEGSIHIRFAHY 348
++ L P+PL QI L AS EEAL L K +P E + + I ++
Sbjct: 303 KGVYILVPLPLEKQIQDLLASHRVEEALVLAKGARRNIPKEKFQVMYRR---ILLQAGFI 359
Query: 349 LFDTGSYEEAMEHFLASQVDITYALSLYPSIVLPKTT 385
F + EA E F + Q+D+ +SLYP ++LP ++
Sbjct: 360 QFAQLQFLEAKELFRSGQLDVRELISLYP-LLLPTSS 395
Score = 143 (55.4 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
Identities = 69/238 (28%), Positives = 102/238 (42%)
Query: 526 ELLKGLNYCDVKICEEILQKKNHYTALLELYKSNARHREALKLLHELVEESKSNQSQDEH 585
+LL N+C + L+K Y AL LY N + A++L +V + QD
Sbjct: 466 DLLVTENFCLLPDSAAWLEKHKKYFALGLLYHYNHQDAAAVQLWVSIV----NGDIQDS- 520
Query: 586 TQKFNPESIIEYLKPLCGTDPMLVLEFSMLVLESCPTQTIELFL--------SGNIPADL 637
T+ E I+++L TDP LV + VL+ +++F SG P D+
Sbjct: 521 TRSDLYEYIVDFLT--YSTDPDLVWRHADWVLQRSQEVGVQVFTKRPLDEQQSGFNPDDI 578
Query: 638 VNSYLKQYSPSMQGRYLELMLAMNENSISGNLQNEMVQIYLSEVLDWYSDLSAQQKWDEK 697
+ S LK+Y P +YLE L + +YL EVL K +
Sbjct: 579 I-SCLKKY-PQALVKYLE-HLVTERRLQKEEYHTHLAVLYLDEVLQQRP--CTPDK--DA 631
Query: 698 AYSPTRKKLLSALESISGYNPEVLLKRLPADALYEERAILLGKMNQHELALSLYVHKV 755
+ T+ KL L+ Y L+ R L E AIL GK+ QHE AL + VH++
Sbjct: 632 EVTETQAKLRRLLQESDLYRVHFLMDRTRGAGLPLESAILHGKLEQHEEALHILVHEL 689
>MGI|MGI:2447427 [details] [associations]
symbol:Tgfbrap1 "transforming growth factor, beta receptor
associated protein 1" species:10090 "Mus musculus" [GO:0005083
"small GTPase regulator activity" evidence=IEA] [GO:0005160
"transforming growth factor beta receptor binding" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0007165 "signal
transduction" evidence=ISO] [GO:0016020 "membrane" evidence=ISO]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0046332
"SMAD binding" evidence=ISO] InterPro:IPR000547 InterPro:IPR001180
Pfam:PF00637 Pfam:PF00780 PROSITE:PS50219 MGI:MGI:2447427
GO:GO:0005737 GO:GO:0007165 GO:GO:0006886 GO:GO:0016020
GO:GO:0006355 GO:GO:0016192 GO:GO:0005083 EMBL:CH466589
InterPro:IPR019453 Pfam:PF10367 CTD:9392 eggNOG:NOG254275
HOGENOM:HOG000007291 HOVERGEN:HBG108563 OrthoDB:EOG4GTKC8
InterPro:IPR019452 Pfam:PF10366 OMA:VQLWVNI EMBL:AK051333
EMBL:AK141742 EMBL:AK159332 EMBL:BC138866 EMBL:BC138867
IPI:IPI00222627 IPI:IPI00754904 RefSeq:NP_001013043.1
UniGene:Mm.246069 ProteinModelPortal:Q3UR70 STRING:Q3UR70
PhosphoSite:Q3UR70 PaxDb:Q3UR70 PRIDE:Q3UR70
Ensembl:ENSMUST00000095014 GeneID:73122 KEGG:mmu:73122
UCSC:uc007ave.1 UCSC:uc007avh.1 GeneTree:ENSGT00530000063596
InParanoid:Q3UR70 ChiTaRS:TGFBRAP1 NextBio:337509 Bgee:Q3UR70
Genevestigator:Q3UR70 Uniprot:Q3UR70
Length = 860
Score = 207 (77.9 bits), Expect = 3.3e-21, Sum P(2) = 3.3e-21
Identities = 95/339 (28%), Positives = 150/339 (44%)
Query: 65 ELERTISGFSKKPILSM-EVLASRQLLLSLSESIAFHRLPNLETIAVLTKAKGANVYSWD 123
+L R + GF KKP+ + A +LL+ SI + NLE + + KGA ++ +
Sbjct: 68 QLHRHL-GF-KKPVNELCAASALNRLLVLCDNSITLVNMLNLEPVPSGARIKGATTFAVN 125
Query: 124 DR--RG--F---LCFARQKR--VCIFRHDGGRGFVEVKDFGVPDTVKSMSWCGENICIAI 174
+ G F +C KR V +F R + VK+ P+ +++ G +C+A+
Sbjct: 126 ESPVNGDPFCVEVCIISVKRRTVQMFLVYEDRVQI-VKEVSTPEQPLAVAVDGYFLCLAL 184
Query: 175 RKGYMILNATNGALSEVFP--SGRIGXXXXXXXXXXXXXXXXXNIGVFVDQNGKLLQADR 232
Y+ILN + G ++FP S +G+F G + Q
Sbjct: 185 TTQYIILNYSTGLSQDLFPYCSEEKPPIVKRIGRQEFLLAGPGGLGMFATVAG-ISQRAP 243
Query: 233 ICWSEAPIAVIIQKPYAIALLPRRVEVRSLRVPYALIQTIVLQNVRHLIPSSNAVVVALE 292
+ WSE I + PY IAL + V S+ + QT+ + L V+VA
Sbjct: 244 VHWSENVIGAAVCFPYVIALDDEFITVHSM-LDQQQKQTLPFKEGHILQDFEGRVIVATS 302
Query: 293 NSIFGLFPVPLGAQIVQLTASGDFEEALALCK----LLPPEDASL--RAAKEGSIHIRFA 346
++ L P+PL QI L A+ EEAL L K +P E + R + + I+FA
Sbjct: 303 KGVYILVPLPLEKQIQDLLANRRVEEALVLAKGARRNIPKEKFQVMYRRILQQAGFIQFA 362
Query: 347 HYLFDTGSYEEAMEHFLASQVDITYALSLYPSIVLPKTT 385
F EA E F +SQ+D+ +SLYP +LP ++
Sbjct: 363 QLQF-----LEAKELFRSSQLDVRELISLYP-FLLPTSS 395
Score = 130 (50.8 bits), Expect = 3.3e-21, Sum P(2) = 3.3e-21
Identities = 65/239 (27%), Positives = 109/239 (45%)
Query: 526 ELLKGLNYCDVKICEEILQKKNHYTALLELYKSNARHREALKLLHELVEESKSNQSQDEH 585
+LL N+C + L+K Y AL LY N + A++L +V + QD
Sbjct: 466 DLLVTENFCLLTDSAAWLEKHKKYFALGLLYHYNKQDASAVQLWVNIV----NGDIQDS- 520
Query: 586 TQKFNPESIIEYLKPLCGTDPMLVLEFSMLVLESCPTQTIELFLSGNI---------PAD 636
T+ E I+++L C D LV + +L+ +++F + P +
Sbjct: 521 TRSDLYEYIVDFLT-YC-LDQELVWTHADWLLQKSEEIGVQIFTKRPLDEQQQTSFNPDN 578
Query: 637 LVNSYLKQYSPSMQGRYLELMLAMNENSISGNLQNEMVQIYLSEVLDWYSDLSAQQKWDE 696
+++S LK+Y P +YLE L ++ + +YL EVL +S K D
Sbjct: 579 IISS-LKKY-PKALVKYLE-HLVIDRRLQKEEYHTHLAILYLEEVLR--QRVSTGGK-DV 632
Query: 697 KAYSPTRKKLLSALESISGYNPEVLLKRLPADALYEERAILLGKMNQHELALSLYVHKV 755
+A + T+ KL L+ Y +L +++ L E AIL GK+ +HE AL + VH++
Sbjct: 633 EA-TETQAKLRRLLQKSDLYRVHLLKEKVQGAGLPMESAILHGKLGEHEKALHILVHEM 690
Score = 41 (19.5 bits), Expect = 6.0e-12, Sum P(2) = 6.0e-12
Identities = 16/62 (25%), Positives = 32/62 (51%)
Query: 685 YSDLSAQQKWDEKAYSPTRKKLLSALESI------SGYNPEV--LLKRLPADALYEERAI 736
Y+DL+ + D++ + ++ L+S L I +GY ++ L +L A+A ++
Sbjct: 407 YADLNQLTQGDQEKMAKCKRFLMSYLNEIRSTEVANGYKEDIDTALLKLYAEADHDSLLD 466
Query: 737 LL 738
LL
Sbjct: 467 LL 468
>UNIPROTKB|A7MB11 [details] [associations]
symbol:TGFBRAP1 "Transforming growth factor-beta
receptor-associated protein 1" species:9913 "Bos taurus"
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005083 "small GTPase regulator
activity" evidence=IEA] InterPro:IPR000547 InterPro:IPR001180
Pfam:PF00637 Pfam:PF00780 PROSITE:PS50219 GO:GO:0005737
GO:GO:0006886 GO:GO:0016192 GO:GO:0005083 InterPro:IPR019453
Pfam:PF10367 EMBL:BC151278 IPI:IPI00866966 RefSeq:NP_001095478.1
UniGene:Bt.5257 STRING:A7MB11 GeneID:514660 KEGG:bta:514660
CTD:9392 eggNOG:NOG254275 HOGENOM:HOG000007291 HOVERGEN:HBG108563
InParanoid:A7MB11 OrthoDB:EOG4GTKC8 NextBio:20871450
InterPro:IPR019452 Pfam:PF10366 Uniprot:A7MB11
Length = 859
Score = 191 (72.3 bits), Expect = 8.0e-21, Sum P(2) = 8.0e-21
Identities = 85/337 (25%), Positives = 149/337 (44%)
Query: 65 ELERTISGFSKKPILSMEVLASRQLLLSLSES-IAFHRLPNLETIAVLTKAKGANVYSWD 123
+L R + GF KK + + ++ LL L + I+ + +LE + + KGA ++ +
Sbjct: 68 QLHRHL-GF-KKAVSELRAASALSRLLVLCDGCISLVHMLSLEPVPSGARIKGATAFALN 125
Query: 124 DR--RG--F---LCFARQKR--VCIFRHDGGRGFVEVKDFGVPDTVKSMSWCGENICIAI 174
+ G F +C KR + +F R + V++ P+ +++ G +C+A+
Sbjct: 126 ENPVSGDPFCVEVCIISVKRRTIQVFLVYEDRVQI-VREVSTPEQPLAVAVDGHFLCLAL 184
Query: 175 RKGYMILNATNGALSEVFP--SGRIGXXXXXXXXXXXXXXXXXNIGVFVDQNGKLLQADR 232
Y+ILN + GA ++FP S +G+F G + Q
Sbjct: 185 TTQYIILNYSTGAAQDLFPFCSEERRPIVKRIGRQEFLLAGPGGLGMFATVAG-ISQRAP 243
Query: 233 ICWSEAPIAVIIQKPYAIALLPRRVEVRSLRVPYALIQTIVLQNVRHLIPSSNAVVVALE 292
+ WSE I + PY +AL + V S+ + QT+ + L V+VA
Sbjct: 244 VRWSENVIGAAVCFPYVVALDDEFITVHSM-LDQQQKQTLPFKEGHILQDFEGRVIVATS 302
Query: 293 NSIFGLFPVPLGAQIVQLTASGDFEEALALCK----LLPPEDASLRAAKEGSIHIRFAHY 348
++ L P+PL +I L AS EEAL L K +P E + + I ++
Sbjct: 303 KGVYILVPLPLEKRIQDLLASHRVEEALVLAKGARRNIPKEKFQVMYRR---ILLQAGFI 359
Query: 349 LFDTGSYEEAMEHFLASQVDITYALSLYPSIVLPKTT 385
F + +A E F + Q+D+ +SLYP ++LP ++
Sbjct: 360 QFAQLQFLKAKELFRSGQLDVRELISLYP-LLLPTSS 395
Score = 143 (55.4 bits), Expect = 8.0e-21, Sum P(2) = 8.0e-21
Identities = 69/238 (28%), Positives = 102/238 (42%)
Query: 526 ELLKGLNYCDVKICEEILQKKNHYTALLELYKSNARHREALKLLHELVEESKSNQSQDEH 585
+LL N+C + L+K Y AL LY N + A++L +V + QD
Sbjct: 466 DLLVTENFCLLPDSAAWLEKHKKYFALGLLYHYNHQDAAAVQLWVSIV----NGDIQDS- 520
Query: 586 TQKFNPESIIEYLKPLCGTDPMLVLEFSMLVLESCPTQTIELFL--------SGNIPADL 637
T+ E I+++L TDP LV + VL+ +++F SG P D+
Sbjct: 521 TRSDLYEYIVDFLT--YSTDPDLVWRHADWVLQRSQEVGVQVFTKRPLDEQQSGFNPDDI 578
Query: 638 VNSYLKQYSPSMQGRYLELMLAMNENSISGNLQNEMVQIYLSEVLDWYSDLSAQQKWDEK 697
+ S LK+Y P +YLE L + +YL EVL K +
Sbjct: 579 I-SCLKKY-PQALVKYLE-HLVTERRLQKEEYHTHLAVLYLDEVLQQRP--CTPDK--DA 631
Query: 698 AYSPTRKKLLSALESISGYNPEVLLKRLPADALYEERAILLGKMNQHELALSLYVHKV 755
+ T+ KL L+ Y L+ R L E AIL GK+ QHE AL + VH++
Sbjct: 632 EVTETQAKLRRLLQESDLYRVHFLMDRTRGAGLPLESAILHGKLEQHEEALHILVHEL 689
>UNIPROTKB|F1P4R5 [details] [associations]
symbol:TGFBRAP1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005083 "small GTPase regulator activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0005160 "transforming growth factor beta receptor
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0046332
"SMAD binding" evidence=IEA] InterPro:IPR000547 InterPro:IPR001180
Pfam:PF00637 Pfam:PF00780 PROSITE:PS50219 GO:GO:0007165
GO:GO:0006886 GO:GO:0016020 GO:GO:0006355 GO:GO:0016192
GO:GO:0005622 GO:GO:0005083 InterPro:IPR019453 Pfam:PF10367
InterPro:IPR019452 Pfam:PF10366 OMA:VQLWVNI
GeneTree:ENSGT00530000063596 EMBL:AADN02017859 EMBL:AADN02017857
EMBL:AADN02017858 IPI:IPI00571976 Ensembl:ENSGALT00000027116
Uniprot:F1P4R5
Length = 865
Score = 190 (71.9 bits), Expect = 2.1e-20, Sum P(2) = 2.1e-20
Identities = 90/333 (27%), Positives = 145/333 (43%)
Query: 72 GFSKKPILSMEVLASRQLLLSLSES-IAFHRLPNLETIAVLTKAKGANVYSWDDR--RG- 127
GF KKP+ ++ ++ LL L ++ I + NLE + + KGA ++ ++ G
Sbjct: 74 GF-KKPVSELKAASALTRLLVLCDNTITLVNMMNLEPVPSGARIKGAVTFTLNENPVSGD 132
Query: 128 -F---LCFARQKRVCIFRHDGGRGFVE-VKDFGVPDTVKSMSWCGENICIAIRKGYMILN 182
F +C KR I V+ VK+ P+ +++ G +C+A+ Y+ILN
Sbjct: 133 PFCVEVCIISVKRRTIQMFMVFEDRVQIVKEVVTPEQPCAVAVDGYYLCLALTTQYIILN 192
Query: 183 ATNGALSEVFP--SGRIGXXXXXXXXXXXXXXXXXNI-GVFVDQNGKLLQADRICWSEAP 239
G ++FP S + G+F +G + Q + WSE
Sbjct: 193 YNTGISQDLFPYCSDEKRPIVKRIGRQEFLLAGPGGLAGMFATVDG-ISQRAPVHWSENV 251
Query: 240 IAVIIQKPYAIALLPRRVEVRSLRVPYALIQTIVLQNVRHLIPSSNAVVVALENSIFGLF 299
I + PY +AL + V S+ + QT+ + L V+VA ++ L
Sbjct: 252 IGAALCFPYVVALDEEFITVHSM-LDQQQKQTLPFKEGHILQDFEGKVIVATNKGVYILV 310
Query: 300 PVPLGAQIVQLTASGDFEEALALCK----LLPPEDASL---RAAKEGSIHIRFAHYLFDT 352
P+PL QI L AS EEAL L K +P E + R ++ I+FA F
Sbjct: 311 PLPLEKQIQDLLASHRVEEALVLAKGARRNIPKEKFQVMYKRILQQAGF-IQFAQLQF-- 367
Query: 353 GSYEEAMEHFLASQVDITYALSLYPSIVLPKTT 385
EA E F + Q+D+ +SLYP +LP ++
Sbjct: 368 ---LEAKELFRSGQLDVRELISLYP-FLLPTSS 396
Score = 140 (54.3 bits), Expect = 2.1e-20, Sum P(2) = 2.1e-20
Identities = 86/348 (24%), Positives = 142/348 (40%)
Query: 420 AQLSELDENATLKSKKMSHNTLMALIKFLQKKRSSIIEKATAEGTEEVVLDAV--GDNFT 477
AQL L+ +S ++ L++L FL SS I ++ E L+ + GD
Sbjct: 363 AQLQFLEAKELFRSGQLDVRELISLYPFLLPTSSSFI-RSHPPLHEYADLNQLTQGDQEK 421
Query: 478 SHDSTRFKKS--SKGRGTIPMYSGAREMXXXXXXXXXXXXXXXXXXXXXXELLKGLNYCD 535
RF S ++ R T + +G +E +LL N+C
Sbjct: 422 MIKCKRFLMSYLNEVRST-EVANGYKE----DIDTALLKLYAEANHESLLDLLVSENFCL 476
Query: 536 VKICEEILQKKNHYTALLELYKSNARHREALKLLHELVEESKSNQSQDEHTQKFNPESII 595
+ L+K Y AL LY N + AL+L ++V+ +D T+ E ++
Sbjct: 477 LTDSAAWLEKHKKYFALGLLYHYNGQDAAALQLWVQIVD----GDIEDS-TRSDLYEYVV 531
Query: 596 EYLKPLCGTDPMLVLEFSMLVLESCPTQTIELFLS--------GNIPADLVNSYLKQYSP 647
++L C +D LV ++S VL+ +++F N+ D V S L +Y P
Sbjct: 532 DFLT-FC-SDQDLVWKYSEWVLQKNEEVGVQIFTKRPLEEQEKNNMNPDDVISCLNKY-P 588
Query: 648 SMQGRYLELMLAMNENSISGNLQNEMVQIYLSEVLDWYSDLSAQQKWDEKAYSPTRKKLL 707
+ +YLE L + + +YL +L S + E KL
Sbjct: 589 KARIKYLE-HLVLERKIEKEKYHTHLAALYLEAILQLKSGTT--DNCMETI--ELLLKLR 643
Query: 708 SALESISGYNPEVLLKRLPADALYEERAILLGKMNQHELALSLYVHKV 755
S L+ Y +L ++ L+ E AIL GK+ +HE AL + VH++
Sbjct: 644 SLLQKSDLYRIHFILDKIRGTDLHMESAILYGKLEEHEKALHILVHEL 691
Score = 37 (18.1 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 555 LYKSNARHREALKLLHELVEESKSNQSQDEH 585
LY H +AL H LV E K ++ +E+
Sbjct: 673 LYGKLEEHEKAL---HILVHELKDFRAAEEY 700
>UNIPROTKB|E2RKZ9 [details] [associations]
symbol:TGFBRAP1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0046332 "SMAD binding" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005160
"transforming growth factor beta receptor binding" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005083 "small
GTPase regulator activity" evidence=IEA] InterPro:IPR000547
InterPro:IPR001180 Pfam:PF00637 Pfam:PF00780 PROSITE:PS50219
GO:GO:0007165 GO:GO:0006886 GO:GO:0016020 GO:GO:0006355
GO:GO:0016192 GO:GO:0005622 GO:GO:0005083 InterPro:IPR019453
Pfam:PF10367 CTD:9392 InterPro:IPR019452 Pfam:PF10366 OMA:VQLWVNI
GeneTree:ENSGT00530000063596 EMBL:AAEX03007417 RefSeq:XP_538441.3
ProteinModelPortal:E2RKZ9 Ensembl:ENSCAFT00000003341 GeneID:481320
KEGG:cfa:481320 NextBio:20856154 Uniprot:E2RKZ9
Length = 859
Score = 197 (74.4 bits), Expect = 3.2e-20, Sum P(2) = 3.2e-20
Identities = 93/339 (27%), Positives = 146/339 (43%)
Query: 65 ELERTISGFSKKPILSMEVLASRQLLLSLSE-SIAFHRLPNLETIAVLTKAKGA------ 117
+L R + GF +KP+ + ++ LL L + SI + +LE + + KGA
Sbjct: 68 QLHRHL-GF-RKPVSELRAASALNRLLVLCDNSITLLNMMSLEPVPSGARIKGAVALALN 125
Query: 118 -NVYSWDDRRGFLCFARQKR--VCIFRHDGGRGFVEVKDFGVPDTVKSMSWCGENICIAI 174
N S D +C KR + +F R + V++ P+ +++ G +C+A+
Sbjct: 126 ENPVSGDPFCVEVCIISVKRRTIQLFLVYEDRVQI-VREVSTPEQPLAVAVDGHFLCLAL 184
Query: 175 RKGYMILNATNGALSEVFP--SGRIGXXXXXXXXXXXXXXXXXNIGVFVDQNGKLLQADR 232
Y+ILN G ++FP S +G+F G + Q
Sbjct: 185 TTQYIILNYNTGFSQDLFPYCSEEKRPIVKRIGRQEFLLAGPGGLGMFATVAG-ISQRAP 243
Query: 233 ICWSEAPIAVIIQKPYAIALLPRRVEVRSLRVPYALIQTIVLQNVRHLIPSSNAVVVALE 292
+ WSE I I PY IAL + V S+ + QT+ + L V+VA
Sbjct: 244 VHWSENVIGAAICFPYVIALDDEFITVHSM-LDQQQKQTLPFKEGHILQDFEGRVIVATS 302
Query: 293 NSIFGLFPVPLGAQIVQLTASGDFEEALALCK----LLPPEDASL--RAAKEGSIHIRFA 346
++ L P+PL QI L AS EEAL L K +P E + R + + I+FA
Sbjct: 303 KGVYILVPLPLEKQIQDLLASHRVEEALVLAKGARRNIPKEKFQVMYRRILQQAGFIQFA 362
Query: 347 HYLFDTGSYEEAMEHFLASQVDITYALSLYPSIVLPKTT 385
F EA E F + Q+D+ +SLYP +LP ++
Sbjct: 363 QLQF-----LEAKELFRSGQLDVRELISLYP-FLLPTSS 395
Score = 131 (51.2 bits), Expect = 3.2e-20, Sum P(2) = 3.2e-20
Identities = 62/237 (26%), Positives = 103/237 (43%)
Query: 526 ELLKGLNYCDVKICEEILQKKNHYTALLELYKSNARHREALKLLHELVEESKSNQSQDEH 585
+LL N C + L+K Y AL LY N + A++L +V N +
Sbjct: 466 DLLVTENSCLLTDSAAWLEKHKKYFALGLLYHYNNQDAAAVQLWVNIV-----NGDIHDS 520
Query: 586 TQKFNPESIIEYLKPLCGTDPMLVLEFSMLVLESCPTQTIELFLS-------GNIPADLV 638
T+ E ++++L D LV +++ VL+ +++F + D +
Sbjct: 521 TRSDLYEYVVDFLT--YSLDQELVWKYADWVLQKSEEVGVQVFTKRPLDEQQNSFNPDSI 578
Query: 639 NSYLKQYSPSMQGRYLELMLAMNENSISGNLQNEMVQIYLSEVLDWYSDLSAQQKWDEKA 698
+ LK+Y P +YLE L ++ + +YL +VL S A K E
Sbjct: 579 ITCLKKY-PKALVKYLE-HLVIDRRLQKEEYHTHLALLYLDKVLQERS--GANSKGVEA- 633
Query: 699 YSPTRKKLLSALESISGYNPEVLLKRLPADALYEERAILLGKMNQHELALSLYVHKV 755
+ T+ KL L+ Y +L+ R+ L E AIL GK+ +HE AL + VH++
Sbjct: 634 -TETQVKLQHLLQKSDLYRVHILIDRIRGAGLPMESAILHGKLEEHEEALRILVHEL 689
Score = 40 (19.1 bits), Expect = 9.0e-11, Sum P(2) = 9.0e-11
Identities = 15/62 (24%), Positives = 32/62 (51%)
Query: 685 YSDLSAQQKWDEKAYSPTRKKLLSALESI------SGYNPEV--LLKRLPADALYEERAI 736
Y+DL+ + D++ + ++ L+S L + +GY ++ L +L A+A ++
Sbjct: 407 YADLNQLTQGDQEKMAKCKRFLMSYLNEVRSTEVANGYKEDIDTALLKLYAEADHDSLLD 466
Query: 737 LL 738
LL
Sbjct: 467 LL 468
>RGD|1310772 [details] [associations]
symbol:Tgfbrap1 "transforming growth factor, beta receptor
associated protein 1" species:10116 "Rattus norvegicus" [GO:0005083
"small GTPase regulator activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] InterPro:IPR000547
InterPro:IPR001180 Pfam:PF00637 Pfam:PF00780 PROSITE:PS50219
RGD:1310772 GO:GO:0007165 GO:GO:0006886 GO:GO:0016020 GO:GO:0006355
GO:GO:0016192 GO:GO:0005622 GO:GO:0005083 InterPro:IPR019453
Pfam:PF10367 OrthoDB:EOG4GTKC8 InterPro:IPR019452 Pfam:PF10366
OMA:VQLWVNI GeneTree:ENSGT00530000063596 IPI:IPI00362404
Ensembl:ENSRNOT00000037094 UCSC:RGD:1310772 Uniprot:D3ZXT8
Length = 860
Score = 199 (75.1 bits), Expect = 4.0e-20, Sum P(2) = 4.0e-20
Identities = 94/339 (27%), Positives = 149/339 (43%)
Query: 65 ELERTISGFSKKPILSM-EVLASRQLLLSLSESIAFHRLPNLETIAVLTKAKGANVYSWD 123
+L R + GF KKP+ + A +LL+ SI + NLE + + KGA ++ +
Sbjct: 68 QLHRHL-GF-KKPVNELCAASALNRLLVLCDNSITLVNMLNLEPVPSGARIKGATTFAVN 125
Query: 124 DR--RG--F---LCFARQKR--VCIFRHDGGRGFVEVKDFGVPDTVKSMSWCGENICIAI 174
+ G F +C KR V +F R + VK+ + +++ G +C+A+
Sbjct: 126 ENPVNGDPFCVEVCIISVKRRTVQMFLVYEDRVQI-VKEVSTTEQPLAVAVDGYFLCLAL 184
Query: 175 RKGYMILNATNGALSEVFP--SGRIGXXXXXXXXXXXXXXXXXNIGVFVDQNGKLLQADR 232
Y+ILN + G ++FP S +G+F G + Q
Sbjct: 185 TTQYIILNYSTGFSQDLFPYCSEEKPPIVKRIGRQEFLLAGPGGLGMFATVAG-ISQRAP 243
Query: 233 ICWSEAPIAVIIQKPYAIALLPRRVEVRSLRVPYALIQTIVLQNVRHLIPSSNAVVVALE 292
+ WSE I + PY IAL + V S+ + QT+ + L V+VA
Sbjct: 244 VHWSENVIGAAVCFPYVIALDDEFITVHSM-LDQQQKQTLPFKEGHILQDFEGRVIVATS 302
Query: 293 NSIFGLFPVPLGAQIVQLTASGDFEEALALCK----LLPPEDASL--RAAKEGSIHIRFA 346
++ L P+PL QI L A+ EEAL L K +P E + R + + I+FA
Sbjct: 303 KGVYILVPLPLEKQIQDLLANRRVEEALVLAKGARRNIPKEKFQVMYRRILQQAGFIQFA 362
Query: 347 HYLFDTGSYEEAMEHFLASQVDITYALSLYPSIVLPKTT 385
F EA E F +SQ+D+ +SLYP +LP ++
Sbjct: 363 QLQF-----LEAKELFRSSQLDVRELISLYP-FLLPTSS 395
Score = 128 (50.1 bits), Expect = 4.0e-20, Sum P(2) = 4.0e-20
Identities = 64/239 (26%), Positives = 106/239 (44%)
Query: 526 ELLKGLNYCDVKICEEILQKKNHYTALLELYKSNARHREALKLLHELVEESKSNQSQDEH 585
+LL N C + L+K Y AL LY N + A++L +V + QD
Sbjct: 466 DLLVTENSCLLTDSAAWLEKHKKYFALGLLYHYNKQDASAVQLWVNIV----NGDIQDS- 520
Query: 586 TQKFNPESIIEYLKPLCGTDPMLVLEFSMLVLESCPTQTIELFLSGNI---------PAD 636
T+ E I+++L C D LV + +L+ +++F + P D
Sbjct: 521 TRSDLYEYIVDFLT-YC-LDQELVWTHADWLLQKSQEVGVQVFTKRPLDEQQQTSFNPDD 578
Query: 637 LVNSYLKQYSPSMQGRYLELMLAMNENSISGNLQNEMVQIYLSEVLDWYSDLSAQQKWDE 696
++ S LK+Y P +YLE L ++ + +YL EVL + + D
Sbjct: 579 II-SCLKKY-PKALVKYLE-HLVIDRRLQKEEYHTHLALLYLEEVLRQRAPTGGK---DV 632
Query: 697 KAYSPTRKKLLSALESISGYNPEVLLKRLPADALYEERAILLGKMNQHELALSLYVHKV 755
+A + T+ KL L+ Y +L +++ L E AIL GK+ +HE AL + VH++
Sbjct: 633 EA-TETQAKLRRLLQKSDLYRVHLLKEKIQGAGLPMESAILHGKLGEHEKALHILVHEM 690
Score = 41 (19.5 bits), Expect = 4.4e-11, Sum P(2) = 4.4e-11
Identities = 16/62 (25%), Positives = 32/62 (51%)
Query: 685 YSDLSAQQKWDEKAYSPTRKKLLSALESI------SGYNPEV--LLKRLPADALYEERAI 736
Y+DL+ + D++ + ++ L+S L I +GY ++ L +L A+A ++
Sbjct: 407 YADLNQLTQGDQEKMAKCKRFLMSYLNEIRSTEVANGYKEDIDTALLKLYAEADHDSLLD 466
Query: 737 LL 738
LL
Sbjct: 467 LL 468
>WB|WBGene00011625 [details] [associations]
symbol:vps-39 species:6239 "Caenorhabditis elegans"
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0005083
"small GTPase regulator activity" evidence=IEA] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0008219 "cell death" evidence=IMP] InterPro:IPR000547
InterPro:IPR001180 InterPro:IPR015943 Pfam:PF00637 Pfam:PF00780
PROSITE:PS50219 GO:GO:0009792 GO:GO:0002009 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 GO:GO:0008219 GO:GO:0005622
GO:GO:0005083 EMBL:Z81589 InterPro:IPR019453 Pfam:PF10367
InterPro:IPR019452 Pfam:PF10366 GeneTree:ENSGT00530000063596
OMA:CLGPIKM GeneID:179902 KEGG:cel:CELE_T08G5.5 UCSC:T08G5.5b
CTD:179902 HOGENOM:HOG000012854 NextBio:907334
RefSeq:NP_001041164.1 ProteinModelPortal:Q1ZXS5 STRING:Q1ZXS5
EnsemblMetazoa:T08G5.5b WormBase:T08G5.5b InParanoid:Q1ZXS5
ArrayExpress:Q1ZXS5 Uniprot:Q1ZXS5
Length = 926
Score = 162 (62.1 bits), Expect = 4.4e-18, Sum P(3) = 4.4e-18
Identities = 63/244 (25%), Positives = 110/244 (45%)
Query: 532 NYCDVKICEEILQKKNHYTALLELYKSNARHREALKLLHELVEESKSNQSQDEHTQKF-- 589
N C + ++IL+ + +L LY++ +H AL L + ++ D+ Q+
Sbjct: 496 NACTFEDAKKILESEGRLRSLFILYETRKKHEMALDLFIDQSSRPDADPFFDDAIQQIVE 555
Query: 590 --------NPESIIEYLKPLCGTDPMLVLEFSMLVLESCPTQTIELFLSGNIPADLVNSY 641
N I++Y K + + LE + + S T+ ++ N+ V +
Sbjct: 556 YLQSLGNSNLPLILKYAKWVLAKN----LEAGVQIFTSDETE-----MARNLNRKAVVEF 606
Query: 642 LKQYSPSMQGRYLELMLAMNENSISGNLQNEMVQIYLSEVL-----------DWYSDLSA 690
LK P YLE ++ E S +++ Y++ V D +SD +
Sbjct: 607 LKSECPDALIPYLEHVIFKWEEP-SSYFHETLLEFYVARVNTLFKDYVHAFPDAFSDENI 665
Query: 691 QQKWDEKA-YSPTRKKLLSALESISGYNPEVLLKRLPADALYEERAILLGKMNQHELALS 749
+ DE RK+LL LE Y+P+ +L +L A YEERA++LG++ QHE AL+
Sbjct: 666 TRAGDEDGELGLYRKRLLKFLEVSHSYSPQTVLLQLAPHAFYEERALILGRLKQHEQALA 725
Query: 750 LYVH 753
+YV+
Sbjct: 726 IYVN 729
Score = 100 (40.3 bits), Expect = 4.4e-18, Sum P(3) = 4.4e-18
Identities = 47/177 (26%), Positives = 84/177 (47%)
Query: 230 ADRICWSEAPIAVIIQKPYAIALLPR-RVEVRSLRVPYALIQTIVLQNVRHLIPSSNA-V 287
+D +SE P+ ++ PY + +L + RVEVRS+ L+QT+ L L + V
Sbjct: 249 SDEYKFSEVPMQIVYDSPYLVGMLSKGRVEVRSI-FDGQLVQTMSLPKAMTLCSGARGQV 307
Query: 288 VVALENSIFGLFPVP-LGAQIVQLTASGDFEEALALCKLLPPEDASLRAAKEG-SIHIRF 345
VA + I+ L L + L FE A+ L E+++L A ++ I +
Sbjct: 308 FVAALSDIWILDTSQNLRKNVSHLIQERHFELAIQLA-----ENSNLFAEEQKLEIKKKA 362
Query: 346 AHYLFDTGSYEEAMEHFLASQVDITYALSLYPSIVLPKTTVVPEP-ERLLDISSDAP 401
A LF+ ++E+ F + DI+ LS+ + P+ ++P+ + + + SD P
Sbjct: 363 ALNLFNQKKFDESFALFGEIKTDISEVLSIIR--MFPE--LLPDGFQSMTGVVSDMP 415
Score = 94 (38.1 bits), Expect = 4.4e-18, Sum P(3) = 4.4e-18
Identities = 31/134 (23%), Positives = 63/134 (47%)
Query: 58 SLRKESYELERTISGFSKKPILSMEVLASRQLLLSLSES-IAFHRL--PNLETIAVLTKA 114
S + +EL F KK ++ ++V LLL +S+ + H+L P + ++ K
Sbjct: 45 SANRRGFELTNICKSFHKKAVMELKVCQREDLLLCVSDGQLMAHKLSDPEYKVETLIHKV 104
Query: 115 KGANVYS-WDDRRG---FLCFARQKRVCIFR---HDGGRGFVEVK-DFGVP--DTVKSMS 164
K ++ + + ++ + +K++ +F+ DG + F+EV D+ DT S+
Sbjct: 105 KPVQTFARFSPKTSGDLYVIVSSRKKLYLFKWGEKDGHKEFIEVALDYNPVFLDTPTSIR 164
Query: 165 WCGENICIAIRKGY 178
GE + ++R Y
Sbjct: 165 CVGEMVFFSVRNEY 178
>DICTYBASE|DDB_G0277663 [details] [associations]
symbol:DDB_G0277663 "Transforming growth factor-beta
receptor-associated protein 1" species:44689 "Dictyostelium
discoideum" [GO:0016192 "vesicle-mediated transport" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0005083 "small GTPase regulator activity" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR000547
InterPro:IPR001180 Pfam:PF00637 Pfam:PF00780 PROSITE:PS50219
dictyBase:DDB_G0277663 GO:GO:0006886 GO:GO:0016192 GO:GO:0005622
EMBL:AAFI02000020 GO:GO:0005083 InterPro:IPR019453 Pfam:PF10367
InterPro:IPR019452 Pfam:PF10366 eggNOG:NOG241434 RefSeq:XP_642561.1
PRIDE:Q54ZD6 EnsemblProtists:DDB0218004 GeneID:8621123
KEGG:ddi:DDB_G0277663 InParanoid:Q54ZD6 OMA:VILYLRI Uniprot:Q54ZD6
Length = 1068
Score = 187 (70.9 bits), Expect = 5.7e-16, Sum P(4) = 5.7e-16
Identities = 67/302 (22%), Positives = 133/302 (44%)
Query: 4 NAFDSLELISNCSPKIDAVASYGLKILLGCSDGSLKIYSPGSSESDRSPPSDYQSLRKES 63
N F+ + +I N KI+++ + I LG +DG + +Y E+++ ++S + S
Sbjct: 3 NPFELIPIIKNAPCKIESIEIWQNNIYLGTNDGQILLYIIEKVENNKK--ITFKSRMENS 60
Query: 64 YELERTISGFSKKPILSMEVLASRQLLLSLSES----IAFHRLPNLETIAVLTKAKGANV 119
L G+ KKP+ + ++A LL+L + + + L T ++ KG
Sbjct: 61 KSL-----GYGKKPVDKLLLIADIGKLLTLCDGNLDVFSMYNLDGPNTQNGISTNKGVIT 115
Query: 120 Y-SWDDRRGF-LCFARQKRVCIFRHDGGRGFVEVKDFGVPDTVKSMSWCGENICIAIRKG 177
+ S + F +C ++++ ++ G F ++ +P+ ++ WC ++C+ RK
Sbjct: 116 FCSKKKSQEFKICVVTKRKLTLYEFIGV--FDMYREIALPELALTVEWCKTSLCVGSRKE 173
Query: 178 YMILNATNGALSEVFPSGRI--GXXXXXXXXXXXXXXXXXNIGVFVDQNGKLLQADRICW 235
Y I++A +G + + G ++ V VD G ++Q I W
Sbjct: 174 YAIVDADSGLYKSLLELDKNVPGPRTKLILDQEKFLLTTVDLSVLVDLQGDIVQGS-IIW 232
Query: 236 SEAPIAVIIQKPYAIALLPRR-VEVRSLRVPYALIQTIVLQNVRHLIPSSNAVVVALENS 294
P+++ +PY I +L R + + ++ LIQ L N H +S++ V
Sbjct: 233 DSNPMSMSYLEPYLITILHNRCINIHDMK-NQKLIQE--LNNSSHNKGASSSSSVISFQQ 289
Query: 295 IF 296
IF
Sbjct: 290 IF 291
Score = 116 (45.9 bits), Expect = 5.7e-16, Sum P(4) = 5.7e-16
Identities = 31/104 (29%), Positives = 54/104 (51%)
Query: 653 YLELMLAMNENSISGNLQNEMVQIYLSEVLDWYSDL-SAQQKWDEKAYSPTRKKLLSALE 711
YLE ++ EN + L ++ Y+ ++ +L S+Q + D + R+KL++ LE
Sbjct: 674 YLEYLIYQEENRVD-YLHTKLATSYIEQIFKNCPELQSSQGRTDIPIANSDRQKLINLLE 732
Query: 712 SISGYNPEVLLKRLPADALYEERAILLGKMNQHELALSLYVHKV 755
+ YN LL R+ LYEE IL ++ Q+E ++ V K+
Sbjct: 733 LSNCYNASTLLHRVRNSLLYEELVILYLRIGQYEKMFNIIVWKL 776
Score = 50 (22.7 bits), Expect = 2.1e-09, Sum P(4) = 2.1e-09
Identities = 22/81 (27%), Positives = 39/81 (48%)
Query: 606 PMLVLEFSMLVLESC-PTQTIELFLSGNIPADLVNSYLKQ---YSPSMQGRYLELMLAMN 661
P ++EF E P + + L L +IP +L+ SYL YS S Q E + N
Sbjct: 934 PRYIIEFLNHYYEEMDPIKVLAL-LPNSIPINLLESYLSNSFNYSISQQR---ESKIVKN 989
Query: 662 -ENSISGNLQNEMVQIYLSEV 681
+ S++ + ++E + + + V
Sbjct: 990 LQKSLNLSTKSEYMMVCSASV 1010
Score = 39 (18.8 bits), Expect = 5.7e-16, Sum P(4) = 5.7e-16
Identities = 28/117 (23%), Positives = 46/117 (39%)
Query: 293 NSIFGLFPVPLGAQIVQLTASGDFEEALALCKLL-PPEDASLRAA----KEGSIH-IRFA 346
NS++ L + + QL G+ EEA+ L ++ E A L +E IH R
Sbjct: 309 NSVYCLHVGNIDDLVHQLINRGEHEEAIRLFEIFFKRERAELEDGYDPNREKQIHQARLC 368
Query: 347 HYL-------FDTGSYEEAMEHFLASQVDITYALSLYPSIVLPKTTVVPEPERLLDI 396
F + A ++ S++D +S +P+ +P T P DI
Sbjct: 369 KVYELVAMSEFYRFKFSSAFKYLQLSKLDHRAIISFFPTY-MPYQTNYRSPFDQSDI 424
Score = 37 (18.1 bits), Expect = 5.7e-16, Sum P(4) = 5.7e-16
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 558 SNARHREALKLLHELVEESKS 578
SNA + LK + L+++SKS
Sbjct: 434 SNAPNTIELKDVDSLIDDSKS 454
>POMBASE|SPAC23H4.14 [details] [associations]
symbol:vam6 "guanyl-nucleotide exchange factor, HOPS
complex subunit Vam6 (predicted)" species:4896 "Schizosaccharomyces
pombe" [GO:0000324 "fungal-type vacuole" evidence=ISO] [GO:0000329
"fungal-type vacuole membrane" evidence=ISO] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0006995
"cellular response to nitrogen starvation" evidence=IMP]
[GO:0017112 "Rab guanyl-nucleotide exchange factor activity"
evidence=ISO] [GO:0030897 "HOPS complex" evidence=ISO] [GO:0042144
"vacuole fusion, non-autophagic" evidence=ISO] [GO:0048278 "vesicle
docking" evidence=ISS] [GO:0070314 "G1 to G0 transition"
evidence=IMP] InterPro:IPR017986 InterPro:IPR000547
InterPro:IPR001180 InterPro:IPR015943 Pfam:PF00637 Pfam:PF00780
PROSITE:PS50219 PomBase:SPAC23H4.14 GO:GO:0005829 GO:GO:0005634
GO:GO:0006886 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0000329 GO:GO:0030897
GO:GO:0017112 GO:GO:0006995 GO:GO:0070314 GO:GO:0042144
GO:GO:0048278 InterPro:IPR019453 Pfam:PF10367 InterPro:IPR019452
Pfam:PF10366 PIR:T38314 RefSeq:NP_593392.1
ProteinModelPortal:O13955 EnsemblFungi:SPAC23H4.14.1 GeneID:2541859
KEGG:spo:SPAC23H4.14 eggNOG:NOG241434 OMA:HITRISD OrthoDB:EOG405W8J
NextBio:20802946 Uniprot:O13955
Length = 905
Score = 164 (62.8 bits), Expect = 2.4e-15, Sum P(2) = 2.4e-15
Identities = 58/237 (24%), Positives = 111/237 (46%)
Query: 527 LLKGLNYCDVKICEEILQKKNHYTALLELYKSNARHREALKLLHELVEE---SKSNQSQD 583
LL+ N C+ + E L Y L+E Y + H AL LL +L +E + S + +
Sbjct: 511 LLRLPNRCETSVVETNLLSAKMYRELVEYYYGKSLHEAALDLLTKLCDEPTDTLSLKGKS 570
Query: 584 EHTQKFNPESIIEYLKPLCGTDPMLVLEFSMLVLESCPTQTIELFLSGNIPADLVNS--- 640
T K+ P I+ YL+ L L+ ++S + L P +I +F+ N A ++
Sbjct: 571 NTTSKYEP--ILSYLEKLSPELDHLIFKYSRVPLSEDPQNSIVIFIDENSEASTISKGVV 628
Query: 641 --YLKQYSPSMQGRYLELMLAMNENSISGNL-QNEMVQIYLSEVLDWYSDLSAQQKWDEK 697
YL+ S + YLE +L +N + + + +YL +L+ + +++
Sbjct: 629 LKYLETISYKVSIIYLEKLLL--DNKFNDTVFPTRLALLYLKRILELEETTDFK---NQE 683
Query: 698 AYSPTRKKLLSALESISGYNPEVLLKRLPA-DALYEERAILL-GKMNQHELALSLYV 752
+ T +KL L + Y+ V+L+ + + D +I+L ++++H+ AL +Y+
Sbjct: 684 VFKQTIEKLEDYLTNSKQYDANVVLQEINSQDEFLSTVSIILYRRLSRHQDALDVYL 740
Score = 119 (46.9 bits), Expect = 2.4e-15, Sum P(2) = 2.4e-15
Identities = 76/399 (19%), Positives = 147/399 (36%)
Query: 2 VHNAFDSLELISNCSPKIDAVASYGLKILLGCSDGSLKIYSPGSSESDRSPPSDYQSLRK 61
+H AF ++ +++ V G + + S+G L Y ++E + + +D+
Sbjct: 1 MHRAFSLYRVLELSKARVECVFELGGLVYVSNSNGDLDSYKIYNNEEEEA--ADFVMEHV 58
Query: 62 ESYELERTISGFSKKPILSMEVLASRQLLLSLSESIAFHRLPNLETIAVLTK--AKGANV 119
+ Y F+KKPI + A++ + +LS+S + + + T L A N+
Sbjct: 59 DVYP------NFTKKPITKVVSCATQDIFYALSDSQVY--VYQISTFKKLFSFGAHCQNM 110
Query: 120 YSWDDRRGFLCFARQKRVCIFRHDGGRGFVEVKDFGVPDTVKSMSWCGEN-ICIAIRKGY 178
+ D + + +K + I+ K + D +S++W I +++ +
Sbjct: 111 CLYGDE--LIVLSSKKNLEIYEIQKNSKPNLTKTISLNDRPRSLAWVSPTMILVSLSNDF 168
Query: 179 MILNATNGALSEVF----PSGRIGXXXXXXXXXXXXXX------XXXNIGVFVDQNG--- 225
+N +S + S +G + + D G
Sbjct: 169 CAVNTETSRISSLNLAWQQSSSLGLGISYIGMSIKSNKLHITRISDDEVLLSKDSQGLLV 228
Query: 226 --KLLQADR--ICWSEAPIAVIIQKPYAIALLPRRVEVRSLRVPYALIQTIVLQNVRHLI 281
K LQ R + W P AVI PY I L + + + + + YA+IQ I + N+
Sbjct: 229 NLKSLQVSRNPLRWPTVPQAVIYNSPYIITLHNQYIYIWN-KETYAMIQQIGISNIYSTF 287
Query: 282 PSSNAVVVALENSIFGLFPVPLGAQIVQLTASGDFEEALALCKLLPPEDASLRAAKEGSI 341
+ ++ L P QI L + + EA+++ + R
Sbjct: 288 SCHKNTFFTSNSYVWILTPEDFSNQIEALLNTENLNEAISVLSQITVSQFPKRDYYLRIT 347
Query: 342 HIRFAHYLFDTGSYEEAMEHFLASQVDITYALSLYPSIV 380
A F +G Y+ AM F + L L+P ++
Sbjct: 348 KREKALRSFSSGDYDLAMRLFSEISESPSTVLGLFPGLL 386
Score = 38 (18.4 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 13/44 (29%), Positives = 19/44 (43%)
Query: 101 RLPNLETIAVLTKAKGANVYSWDDRRGFLCFARQKRVCIFRHDG 144
RL +L T ++ K S+D+ FL QK+ DG
Sbjct: 438 RLRSLSTYLTDSRRKANRFLSYDEEHYFL----QKKNLFLNADG 477
>SGD|S000002235 [details] [associations]
symbol:VAM6 "Vacuolar protein involved in vacuolar membrane
fusion tethering" species:4932 "Saccharomyces cerevisiae"
[GO:0006810 "transport" evidence=IEA] [GO:0035542 "regulation of
SNARE complex assembly" evidence=IDA] [GO:0035091
"phosphatidylinositol binding" evidence=IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0000329 "fungal-type vacuole membrane"
evidence=IDA] [GO:0034727 "piecemeal microautophagy of nucleus"
evidence=IMP] [GO:0017112 "Rab guanyl-nucleotide exchange factor
activity" evidence=IDA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005773 "vacuole" evidence=IEA] [GO:0030897 "HOPS
complex" evidence=IPI] [GO:0007033 "vacuole organization"
evidence=IMP] [GO:0016192 "vesicle-mediated transport"
evidence=IMP] [GO:0032889 "regulation of vacuole fusion,
non-autophagic" evidence=IDA] [GO:0000324 "fungal-type vacuole"
evidence=IDA] [GO:0042144 "vacuole fusion, non-autophagic"
evidence=IMP;IDA] [GO:0005774 "vacuolar membrane" evidence=IEA]
SGD:S000002235 GO:GO:0016192 GO:GO:0015031 EMBL:BK006938
GO:GO:0000329 GO:GO:0030897 GO:GO:0017112 GO:GO:0032889
GO:GO:0034727 GO:GO:0042144 InterPro:IPR019453 Pfam:PF10367
GO:GO:0035542 InterPro:IPR019452 Pfam:PF10366
GeneTree:ENSGT00530000063596 OrthoDB:EOG405W8J EMBL:Z74125
EMBL:D83058 PIR:S67613 RefSeq:NP_010206.1 ProteinModelPortal:Q07468
DIP:DIP-1002N IntAct:Q07468 MINT:MINT-423868 STRING:Q07468
PaxDb:Q07468 PeptideAtlas:Q07468 EnsemblFungi:YDL077C GeneID:851482
KEGG:sce:YDL077C CYGD:YDL077c eggNOG:NOG270269 HOGENOM:HOG000154806
OMA:WAPPQLV NextBio:968798 Genevestigator:Q07468 GermOnline:YDL077C
Uniprot:Q07468
Length = 1049
Score = 127 (49.8 bits), Expect = 0.00040, P = 0.00040
Identities = 58/213 (27%), Positives = 97/213 (45%)
Query: 532 NYCDVKICEEILQKKNHYTALLELYKSNARHREALKLLHELVEESKSNQSQDEHTQKFNP 591
N+CD + L+ ++ + L++ Y H EALK L +LV+E +++ + + QK +
Sbjct: 627 NHCDSHVIVTELKIRHMFKDLIDFYYKRGNHEEALKFLTDLVDELENDNTDQKQRQKIDH 686
Query: 592 ES---IIEYLKPLCGTDPMLVLEFSMLVLESCPTQTIELFLSGNIPADL----------V 638
+I YLK L ++ ++ +L +I+ LS D V
Sbjct: 687 GVKILVIYYLKKLSNPQLDVIFTYTDWLLNR-HNDSIKEILSSIFFYDSQACSSRDHLKV 745
Query: 639 NSYLKQYSPSMQGRYLELMLAMNENSISGN-LQNEMVQIYLSEVLDWYSDLSAQQKWDEK 697
Y+K++ + +YLE A++ + GN L ++++YL E LD S
Sbjct: 746 YGYIKKFDKLLAIQYLEF--AISTFRLEGNKLHTVLIKLYL-ENLDIPS----------- 791
Query: 698 AYSPTRKKLLSALESISGYNPEVLLKRLPADAL 730
TR KL S LE+ S Y P +LK L DA+
Sbjct: 792 ----TRIKLKSLLETTSVYEPRTILKLLN-DAI 819
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.135 0.388 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 823 768 0.00092 121 3 11 22 0.39 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 28
No. of states in DFA: 620 (66 KB)
Total size of DFA: 368 KB (2183 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 65.47u 0.17s 65.64t Elapsed: 00:00:03
Total cpu time: 65.48u 0.17s 65.65t Elapsed: 00:00:03
Start: Tue May 21 04:18:28 2013 End: Tue May 21 04:18:31 2013