Your job contains 1 sequence.
>003406
MDPAPITSPNANAPFNPQPDVSITTKTNEKRAAENGEDPEMKSKKRARIGAAGKEGKRVA
EIVLVLSAMWRMRGGGGKGPTEVERRLMAEAREKLVDMCEGLAPKDIVARDAIVGLIEDL
GLNGRVKEQKLGFRGQRLSIKEKVELSKRKMEEPKKFSTQPTAYTSNSLQTSFGTAPENR
GTSHTVRMFPLDKVGSSPTLSSGGFSTSSPPVHVHATTSASLPYQLLNNDARPPTVSTGL
PSSHLGRDSSSLALPRVEKPQVKLDGGSNGSSYVSQVQANASANHPLVNAPTWSVQPQSA
SSAKAVLENKVPNHIPVKLEGPADMSRTAPQAVRDQSFRPFISQTGNMPNVHQPLQGTNI
VQAPQFGSNHGEIAKIVQKLLHPKLPQHPTWTPPSREYMSKAFTCQICKLTANEVETVVL
CDACEKGFHLKCLQMNNQKGIPRGGEWHCMSCLKLSNGKPLPPKYGRVMRSINTTKMPSN
TSVIQSPSDKKFISVDQKVNNQQKITVNGSSGGSGALGSNSNDCDLKIHNIRATQGGNLV
SSTKSKDQETSSGTYPSNVTKPLGVVPPPGDSHGPIQSTQVCESSTQLEKLASESKSEHP
AISSETVSNHSAASQPSHNSQVVRTDLANSAEVSLKNSHDSSSTIKQDEEVVGRLNPVGN
SVISSDALHNVQWIGDVLQIVDGKKFYQSCRIGGVTYKVKDHVLLHSSNNKLMPSKLQTM
WEDTGTGSKWVMVNRCFFPGDLPEAVGCPCAPESNELYESNNESSVMAGLIRGPCEVLPP
GKFKEENERLNHLGNEANKGRHPVFLCQWFYDELKGVFRPVSG
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 003406
(823 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2008051 - symbol:AT1G50620 "AT1G50620" species... 580 3.9e-89 2
TAIR|locus:2092414 - symbol:AT3G20280 "AT3G20280" species... 486 8.0e-44 1
FB|FBgn0033636 - symbol:tou "toutatis" species:7227 "Dros... 118 0.00011 3
TAIR|locus:2096672 - symbol:MBD9 "methyl-CPG-binding doma... 104 0.00036 2
FB|FBgn0029861 - symbol:CG3815 species:7227 "Drosophila m... 112 0.00040 2
TAIR|locus:2169779 - symbol:ATXR6 "AT5G24330" species:370... 116 0.00063 2
>TAIR|locus:2008051 [details] [associations]
symbol:AT1G50620 "AT1G50620" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628
PROSITE:PS50016 SMART:SM00249 EMBL:CP002684 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 EMBL:AC079279 HSSP:Q13263 IPI:IPI00525631
PIR:G96542 RefSeq:NP_175477.1 UniGene:At.15785
ProteinModelPortal:Q9C6P8 SMR:Q9C6P8 PRIDE:Q9C6P8
EnsemblPlants:AT1G50620.1 GeneID:841484 KEGG:ath:AT1G50620
TAIR:At1g50620 InParanoid:Q9C6P8 OMA:AMNPIVE PhylomeDB:Q9C6P8
ProtClustDB:CLSN2912810 ArrayExpress:Q9C6P8 Genevestigator:Q9C6P8
Uniprot:Q9C6P8
Length = 629
Score = 580 (209.2 bits), Expect = 3.9e-89, Sum P(2) = 3.9e-89
Identities = 153/444 (34%), Positives = 224/444 (50%)
Query: 216 ATTSASLPYQLLNNDARPPTVSTGLPSSHLGRDSSSLALPRVEKPQVKLDGGSNGSSYVS 275
A + S+ +Q N++ + S SH R++S + R+E+PQ K D + S
Sbjct: 151 AVNNVSMAHQWPNSEMKASASSVNASGSHYVREASGITQARMERPQFKSDLHTG----TS 206
Query: 276 QVQANASANHPLVNAPTWSVQPQSASSAKAVLENKVPNHIPVKLEGPADMSRTAPQAVRD 335
Q A + N+ N TWS QP S++S + + +PV P+ SR + D
Sbjct: 207 QGPAVPAGNY-FGNTTTWSAQPHSSTSTIS-FGTASDSKVPV----PSS-SR-----ISD 254
Query: 336 QSFRPFISQTGNMPNVHQPLQGTNIVQAPQ-FGSN-HGEIAKIVQKLLHPKLPQHPTWTP 393
SFRPF+SQT P ++G Q FG+N H EIAK++ K+L P+ Q+ W P
Sbjct: 255 PSFRPFMSQTP--PGAFPGMKGATYGQTSSPFGNNNHAEIAKLIHKVLQPRAKQNLLWNP 312
Query: 394 PSREYMSKAFTCQICKLTANEVETVVLCDACEKGFHLKCLQMNNQKGIPRGGEWHCMSCL 453
PSREYMSKA TCQIC+ T NE+ETV++CDACEKG+HLKCL +N KG+P+ EWHC C+
Sbjct: 313 PSREYMSKAMTCQICQGTINEIETVLICDACEKGYHLKCLHAHNIKGVPKS-EWHCSRCV 371
Query: 454 KLSNGKPLPPKYGRVMRSINTTKMPSNTSVIQSPSDKKFISVDQKVNNQQKITVXXXXXX 513
+L NGK PPKYGRVMRS T KM S+T+ +Q P++K +DQKV+ + +
Sbjct: 372 QLYNGKSFPPKYGRVMRSATTAKMSSSTAEVQLPAEKGVGKMDQKVSQEGMPHLETAKPT 431
Query: 514 XXXXXXXXXDC-DLKIHNIRATQGGNLVSSTKSKDQ---ETSSGTYPSNVTKPLGVVPPP 569
+ D+ ++ I +V + + E G V K + +
Sbjct: 432 KDSAMEQTVEAEDVAMNPIVEKAMSEMVEAEGAAINPIVEAEDGAMNPIVEKAMSQIVEA 491
Query: 570 GDSHGPIQSTQVCESSTQLEKLASESKSEHPAISSETVSNHSAASQPS-HNSQVVRTDLA 628
D+ I TQ +++S+ P SE VS+ + P +V+R D
Sbjct: 492 EDA--AINQAVDANFQTQAPTGNDDAESDDP---SEPVSHSETLNPPELEKKEVMRKDAT 546
Query: 629 N---SAEVSLKNSHDSSSTIKQDE 649
SA+ KNS + + Q+E
Sbjct: 547 ERSVSADCQDKNSKIIAESSLQEE 570
Score = 329 (120.9 bits), Expect = 3.9e-89, Sum P(2) = 3.9e-89
Identities = 77/148 (52%), Positives = 99/148 (66%)
Query: 20 DVSITTKT-NEKRAAENGEDPEMKSKKRARIGAAGKEGKRVAEIVLVLSAMWRMRGGGGK 78
DV + ++ EKR E E+ +K KK+ R +E RVAEIVLVLSA+ ++RGG K
Sbjct: 8 DVPVNLESVEEKRDEETVEESPVK-KKKPRFD---EEVNRVAEIVLVLSALRKIRGG--K 61
Query: 79 GPTEVERRLMAEAREKLVDMCEGLAPKDIVARDAIVGLIEDLGLNGRVKEQKLGFRGQRL 138
PTE+E LM EA+ KLVDMC+ PKDI+ DAI +IEDLG NG++K+Q+LGFR +L
Sbjct: 62 PPTELEIDLMVEAKSKLVDMCQEFTPKDIIGVDAIGAVIEDLGFNGKLKDQRLGFRAPKL 121
Query: 139 SIKEKVELSKRKMEEPKKFSTQPTAYTS 166
+I EK+ L KRKMEE KK T TS
Sbjct: 122 TISEKLSLGKRKMEELKKNPVVSTTSTS 149
Score = 49 (22.3 bits), Expect = 9.3e-27, Sum P(2) = 9.3e-27
Identities = 17/64 (26%), Positives = 33/64 (51%)
Query: 581 VCESSTQLEKLASESKSEHPAISSETVSNHSAASQPSHNSQVVRTDLANSAEVSLKNSHD 640
+ ESS Q E AS++++ S++ ++HS + + N + ++ A+ AE S
Sbjct: 562 IAESSLQEEISASQTENSPTQPPSQSDTDHSQQQKTTPNVEEEKS--ASQAENSPTQPPS 619
Query: 641 SSST 644
S+T
Sbjct: 620 QSNT 623
Score = 37 (18.1 bits), Expect = 1.7e-25, Sum P(2) = 1.7e-25
Identities = 10/43 (23%), Positives = 20/43 (46%)
Query: 568 PPGDSHGPIQSTQVCESSTQLEKLASESKSEHPAISSETVSNH 610
PP S Q + + EK AS++++ S++ ++H
Sbjct: 583 PPSQSDTDHSQQQKTTPNVEEEKSASQAENSPTQPPSQSNTDH 625
>TAIR|locus:2092414 [details] [associations]
symbol:AT3G20280 "AT3G20280" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628
PROSITE:PS50016 SMART:SM00249 EMBL:CP002686 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 EMBL:AB024036 IPI:IPI00548743 RefSeq:NP_851007.1
UniGene:At.26379 ProteinModelPortal:A8MQI3 SMR:A8MQI3
EnsemblPlants:AT3G20280.1 GeneID:821572 KEGG:ath:AT3G20280
ProtClustDB:CLSN2680002 Genevestigator:A8MQI3 Uniprot:A8MQI3
Length = 743
Score = 486 (176.1 bits), Expect = 8.0e-44, P = 8.0e-44
Identities = 118/331 (35%), Positives = 173/331 (52%)
Query: 191 LDKVGSSPTLSSGGFSTSSPPVHVHATTSASLPYQLLNNDARPPTVSTGLPSSHLGRDSS 250
++ +G + L +P V + + SL + + + PT ST L + +
Sbjct: 98 IEDLGFNGKLKDQRLGFRAPTVTI--SEKLSLGKRKMEEAEKYPTTSTVSTGYTLSQPNG 155
Query: 251 SLALPR--VEKPQVK--------LDGGSNGSSYV---SQVQANASANHPLVNAPTWSVQP 297
SLA P K V ++GS + Q+ N ++ V++ + +P
Sbjct: 156 SLASPGGLANKASVAHQWPSSEVATANTSGSHFKLDRPQMVLNGASQGTPVSSANYYAEP 215
Query: 298 QSASSAKAVLENKVPNH-IPVKLEGPADMSRTAPQAVRDQSFRPFISQTGNMPNVHQPLQ 356
SA + + P+ +P++ RTA D SFRPF + G +QP+
Sbjct: 216 WSAQLPSTISFSTAPDKKVPIQ-----SSVRTA-----DPSFRPF--RHGTFTGTNQPMH 263
Query: 357 GTNIVQAPQFGSNHGEIAKIVQKLLHPKLPQHPTWTPPSREYMSKAFTCQICKLTANEVE 416
+ Q FG NH EIAKI+ K L P++ Q+P W PPSREYMS+A CQIC++T NE++
Sbjct: 264 YS---QTSSFGGNHTEIAKIIHKFLQPRVKQYPLWNPPSREYMSRAMACQICEVTINEMD 320
Query: 417 TVVLCDACEKGFHLKCLQMNNQKGIPRGGEWHCMSCLKLSNGKPLPPKYGRVMRSINTT- 475
T+++CDACEK +HLKCLQ NN KG+P+ EWHC C++ NGKP PP YGR R++ TT
Sbjct: 321 TLLICDACEKAYHLKCLQGNNMKGVPKS-EWHCSRCVQAFNGKPFPPTYGRATRAVATTT 379
Query: 476 -KMPSNTSVIQSPSDKKFISVDQKVNNQQKI 505
KMP + + S S KK +D K N Q+ I
Sbjct: 380 AKMPFRAAGVLSSSAKKIGPMDIKANQQKPI 410
Score = 324 (119.1 bits), Expect = 1.6e-28, Sum P(2) = 1.6e-28
Identities = 83/212 (39%), Positives = 116/212 (54%)
Query: 35 NGEDPEMKSKKRARIGAAGKEGKRVAEIVLVLSAMWRMRGGGGKGPTEVERRLMAEAREK 94
NG +P K+ R +E RVAEIVLVLSA+ RMRGG + PT +E LM EAR K
Sbjct: 21 NGAEPVSPPAKKPRFD---EEMNRVAEIVLVLSALGRMRGG--ETPTALELELMFEARSK 75
Query: 95 LVDMCEGLAPKDIVARDAIVGLIEDLGLNGRVKEQKLGFRGQRLSIKEKVELSKRKMEEP 154
L MC PKDI+ +D + +IEDLG NG++K+Q+LGFR ++I EK+ L KRKMEE
Sbjct: 76 LAGMCLEFDPKDIIRKDDVKSVIEDLGFNGKLKDQRLGFRAPTVTISEKLSLGKRKMEEA 135
Query: 155 KKFSTQPTAYTSNSLQTSFGTAPENRGTSH---TVRMFPLDKVGSSPTLSSGGFSTSSPP 211
+K+ T T T +L G+ G ++ +P +V ++ T S F P
Sbjct: 136 EKYPTTSTVSTGYTLSQPNGSLASPGGLANKASVAHQWPSSEVATANT-SGSHFKLDRPQ 194
Query: 212 VHVHATTSASLPYQLLNNDARPPTVSTGLPSS 243
+ ++ + + P N A P S LPS+
Sbjct: 195 MVLNGASQGT-PVSSANYYAEP--WSAQLPST 223
Score = 75 (31.5 bits), Expect = 1.6e-28, Sum P(2) = 1.6e-28
Identities = 54/226 (23%), Positives = 82/226 (36%)
Query: 455 LSNG---KPLPPKYGRVMRSIN----TTKMPSNTSVIQSPSDKKFIS-VDQKVNNQQKIT 506
++NG KPL P G M S + ++P N + SPS S V Q Q
Sbjct: 488 INNGLISKPLTP-VG-TMSSTSPLPVVNQLPVNATSNASPSTPITASLVAQAPTVTQNGD 545
Query: 507 VXXXXXXXXXXXXXXXDCDLKIHNIRATQGGNLVSSTKSKD--QETSSGTYPSNVT---K 561
D ++H + T N + + + T NV+ K
Sbjct: 546 GSSTASGTADHSILNADITTQVHTLTVTSSSNSQQAVSHSEVAKATEDAAPLENVSECEK 605
Query: 562 PLGVVPPPGDSHGPIQSTQVCESSTQLEKLASESKSEHPAISSETV-----SNHSAASQP 616
P P + S V ESS K+ SE+ HP S TV S +AA
Sbjct: 606 PSESTSHPDSLNDKTISENVQESSKDA-KVDSEACQNHPTASPATVVPDQDSTITAAPSV 664
Query: 617 SHNSQVVRTDLANSAEVSLKNSHDSSSTIKQDEEVVGRLNPV-GNS 661
+ T+ +S+ +++DS T K+ V ++ V G+S
Sbjct: 665 TQEDSAFNTEKTPPQPLSVSSNYDSQ-TEKETPNVQDSVHNVPGDS 709
Score = 37 (18.1 bits), Expect = 1.6e-24, Sum P(2) = 1.6e-24
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 524 CDL--KIHNIRATQGGNLVSSTKSK 546
CD K ++++ QG N+ KS+
Sbjct: 325 CDACEKAYHLKCLQGNNMKGVPKSE 349
>FB|FBgn0033636 [details] [associations]
symbol:tou "toutatis" species:7227 "Drosophila melanogaster"
[GO:0006338 "chromatin remodeling" evidence=NAS] [GO:0003682
"chromatin binding" evidence=NAS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007399 "nervous system development" evidence=IMP] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0008134 "transcription factor binding"
evidence=IPI] InterPro:IPR001487 InterPro:IPR001739
InterPro:IPR001876 InterPro:IPR001965 InterPro:IPR016177
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF01429
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50982
SMART:SM00249 SMART:SM00297 SMART:SM00547 EMBL:AE013599
GO:GO:0005634 GO:GO:0007399 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0045944 SUPFAM:SSF54171 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR004022 InterPro:IPR018501
Pfam:PF02791 PROSITE:PS50827 GeneTree:ENSGT00660000095335
Gene3D:3.30.890.10 UniGene:Dm.2658 GeneID:36241
KEGG:dme:Dmel_CG10897 CTD:36241 FlyBase:FBgn0033636
GenomeRNAi:36241 NextBio:797507 RefSeq:NP_001097270.1
ProteinModelPortal:A8DYA3 SMR:A8DYA3 STRING:A8DYA3
EnsemblMetazoa:FBtr0113066 UCSC:CG10897-RE OMA:GRHTTLL
PhylomeDB:A8DYA3 Bgee:A8DYA3 Uniprot:A8DYA3
Length = 3131
Score = 118 (46.6 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 395 SREYMSKAFTCQICKLTANEVETVVLCDACEKGFHLKCLQMNNQKGIPRGGEWHCMSCL- 453
S +Y + CQ C NE + ++LCD C+KG+H C + IP G+W+C C+
Sbjct: 2631 SSKYSNSLQNCQFCTSGENE-DKLLLCDGCDKGYHTYCFKPK-MDNIP-DGDWYCYECVN 2687
Query: 454 KLSN 457
K +N
Sbjct: 2688 KATN 2691
Score = 85 (35.0 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 48/165 (29%), Positives = 70/165 (42%)
Query: 158 STQPTAYTSNSLQTSFGTAPENRGTSHTVRMFPLDKVGSSPTLSSGG-FSTSSPPVHVH- 215
ST PT TS+S S G+ N+ S V + L PT++S G ++ SS VH
Sbjct: 660 STAPTTSTSSS---SAGSNLLNQSNSDRVEVIKLP-----PTITSNGAYNLSSKGKEVHD 711
Query: 216 -----ATTSASLPYQLLNN---DARPPTVSTGLPSSHLGRDSSSLALPRVEKPQVKLDGG 267
AT S + L +N A P+ + G S+ + D L KP K +
Sbjct: 712 LTTDMATNSGGVNLSLKSNAGSSALTPSGAVGSASNPITIDDFDAPLNLSMKPSDKSNSS 771
Query: 268 SN-----GSSYVSQVQANASANHPLVNAPTWSVQPQSASSAKAVL 307
S+ GSS S AN ++++ ++ QS SS A L
Sbjct: 772 SSNAAAGGSSSSSAALANLASDYQAASSGQSGNSLQSLSSITAAL 816
Score = 40 (19.1 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 6/18 (33%), Positives = 12/18 (66%)
Query: 472 INTTKMPSNTSVIQSPSD 489
+NT + P+ +I++P D
Sbjct: 3051 VNTKQFPTYRKIIKTPMD 3068
>TAIR|locus:2096672 [details] [associations]
symbol:MBD9 "methyl-CPG-binding domain 9" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;IDA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008327 "methyl-CpG binding"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0010223 "secondary shoot
formation" evidence=IMP] [GO:0043966 "histone H3 acetylation"
evidence=IMP] [GO:0043967 "histone H4 acetylation" evidence=IMP]
[GO:0048573 "photoperiodism, flowering" evidence=IMP] [GO:0004402
"histone acetyltransferase activity" evidence=IDA] [GO:0016573
"histone acetylation" evidence=IDA] [GO:0042393 "histone binding"
evidence=IPI] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0007155
"cell adhesion" evidence=RCA] [GO:0009793 "embryo development
ending in seed dormancy" evidence=RCA] [GO:0010090 "trichome
morphogenesis" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0045010 "actin nucleation" evidence=RCA] [GO:0048765 "root hair
cell differentiation" evidence=RCA] [GO:0071555 "cell wall
organization" evidence=RCA] InterPro:IPR001841 InterPro:IPR001739
InterPro:IPR001965 InterPro:IPR003888 InterPro:IPR003889
InterPro:IPR016177 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01429
Pfam:PF05964 Pfam:PF05965 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS50302 PROSITE:PS50982 PROSITE:PS51542
PROSITE:PS51543 SMART:SM00184 SMART:SM00249 Prosite:PS00518
GO:GO:0009506 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0006355 GO:GO:0046872 GO:GO:0008270 GO:GO:0006351
SUPFAM:SSF54171 GO:GO:0043967 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0048573 EMBL:AC009325 PROSITE:PS00633
GO:GO:0010223 GO:GO:0043966 GO:GO:0004402 GO:GO:0008327
EMBL:AC010870 eggNOG:NOG79337 UniGene:At.41275 UniGene:At.47815
HSSP:Q14839 IPI:IPI00538023 RefSeq:NP_186795.1
ProteinModelPortal:Q9SGH2 SMR:Q9SGH2 PaxDb:Q9SGH2 PRIDE:Q9SGH2
EnsemblPlants:AT3G01460.1 GeneID:821132 KEGG:ath:AT3G01460
TAIR:At3g01460 HOGENOM:HOG000153462 InParanoid:Q9SGH2 OMA:GTRIRKC
PhylomeDB:Q9SGH2 ProtClustDB:CLSN2684998 Genevestigator:Q9SGH2
Uniprot:Q9SGH2
Length = 2176
Score = 104 (41.7 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 34/125 (27%), Positives = 52/125 (41%)
Query: 328 TAPQAVRDQSFRPFISQTGNMPNVHQPLQGTNIVQAPQFGSNHGEIAKIVQKLLHPKLPQ 387
T AV+++S R F+ N L G A Q E ++V+ + H P
Sbjct: 14 TKTAAVKEES-RSFLGIDLNEIPTGATLGGG--CTAGQDDDGEYEPVEVVRSI-HDN-PD 68
Query: 388 HPTWTPPSREYMSKAFTCQICKLTANEVETVVLCDACEKGFHLKCLQMNNQKGIPRGGEW 447
P + +C C +E VV+CDACE+GFH+ C+ + + P +W
Sbjct: 69 PAPGAPAEVPEPDRDASCGACG-RPESIELVVVCDACERGFHMSCVN-DGVEAAP-SADW 125
Query: 448 HCMSC 452
C C
Sbjct: 126 MCSDC 130
Score = 81 (33.6 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 38/127 (29%), Positives = 59/127 (46%)
Query: 545 SKDQETSSGTYPS-NVTK-PLGVVPPPGDSHGPIQSTQVCESSTQLEKLASESKSEHP-A 601
++D ETSS Y + N K PL PG+SH +++ SS E ++S + E P A
Sbjct: 1486 TRDDETSSTAYLNKNQGKSPLETDTQPGESHVNFGESKI--SSP--ETISSPGRHELPIA 1541
Query: 602 ISSETVSNHSAASQPSHN--SQVVR---TDLANSAEVSLKNSHDSSSTIKQDEEVVGR-L 655
+S V+++ S V R T NS V L +HD+SS Q+ + + L
Sbjct: 1542 DTSPLVTDNLPEKDTSETLLKSVGRNHETHSPNSNAVELPTAHDASSQASQELQACQQDL 1601
Query: 656 NPVGNSV 662
+ N +
Sbjct: 1602 SATSNEI 1608
>FB|FBgn0029861 [details] [associations]
symbol:CG3815 species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0070822 "Sin3-type complex" evidence=IDA]
InterPro:IPR000253 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50006 PROSITE:PS50016 SMART:SM00249
GO:GO:0046872 EMBL:AE014298 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0070822 HSSP:Q14839
eggNOG:NOG145066 GeneTree:ENSGT00440000033777 EMBL:AY069054
RefSeq:NP_572311.1 UniGene:Dm.2312 SMR:Q9W410 IntAct:Q9W410
MINT:MINT-921456 STRING:Q9W410 EnsemblMetazoa:FBtr0070899
GeneID:31571 KEGG:dme:Dmel_CG3815 UCSC:CG3815-RA
FlyBase:FBgn0029861 InParanoid:Q9W410 OMA:SEFGTEV OrthoDB:EOG45HQC9
GenomeRNAi:31571 NextBio:774240 Uniprot:Q9W410
Length = 878
Score = 112 (44.5 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 38/136 (27%), Positives = 58/136 (42%)
Query: 372 EIAKIVQKLLHPKLPQHPTWTPPSREYMSKAFTCQICKLTANEVETVVLCDACEKGFHLK 431
E K++Q+ + K HP + P R + C C+ N ++ CD C FHL+
Sbjct: 28 EDEKMMQRSTNTK---HPYYRRPGRGHNHDY--CDACEEGGN----LLCCDRCPSSFHLQ 78
Query: 432 CLQMN-NQKGIPRGGEWHCMSCL--KLSNGKPLPPKYGRVMRSINTTKMPSNTSVIQSPS 488
C +++ IP G+W C SC KLS PP S+ + S +PS
Sbjct: 79 CHDPPLSEEDIP-SGQWLCHSCRMSKLSQ----PPASSSKASSVERVPSAGSGSRANTPS 133
Query: 489 DKKFISVDQKVNNQQK 504
S+ K+ N +K
Sbjct: 134 SGDLESIPLKIRNLRK 149
Score = 64 (27.6 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 29/101 (28%), Positives = 46/101 (45%)
Query: 570 GDSHG-PIQSTQVCESSTQLEKLASESKSEHPAISSETVSNHSAASQPSHNSQVVRTDLA 628
GDS P + E++T +K+ E +E+P T SN A+ QPS VV+ +
Sbjct: 445 GDSDSDPSPEEKRTETNTPADKVNGEVDTENP----NTESNAQASEQPS----VVKVESK 496
Query: 629 NSAEVSLKNSHDSSSTIKQDEEVVGRLNPVGNSVISSDALH 669
S EV ++ ++DEE + +I +D LH
Sbjct: 497 TSLEVE--------ASFEEDEEDSKK----STGIIDADLLH 525
>TAIR|locus:2169779 [details] [associations]
symbol:ATXR6 "AT5G24330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009901 "anther dehiscence" evidence=IMP] [GO:0051726
"regulation of cell cycle" evidence=IEP] [GO:0046976 "histone
methyltransferase activity (H3-K27 specific)" evidence=IDA]
[GO:0070734 "histone H3-K27 methylation" evidence=IDA] [GO:0006275
"regulation of DNA replication" evidence=IGI;RCA] [GO:0000280
"nuclear division" evidence=RCA] [GO:0000911 "cytokinesis by cell
plate formation" evidence=RCA] [GO:0006261 "DNA-dependent DNA
replication" evidence=RCA] [GO:0010389 "regulation of G2/M
transition of mitotic cell cycle" evidence=RCA] [GO:0042023 "DNA
endoreduplication" evidence=RCA] [GO:0051225 "spindle assembly"
evidence=RCA] Pfam:PF00856 InterPro:IPR001214 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50280
SMART:SM00249 SMART:SM00317 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006275 GO:GO:0046872 EMBL:AB016884
GO:GO:0008270 EMBL:AB006701 GO:GO:0051726 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0009901
InterPro:IPR019786 PROSITE:PS01359 EMBL:BT012223 EMBL:BT012421
IPI:IPI00543408 RefSeq:NP_197821.1 UniGene:At.30965
ProteinModelPortal:Q9FNE9 SMR:Q9FNE9 DIP:DIP-48530N STRING:Q9FNE9
PRIDE:Q9FNE9 EnsemblPlants:AT5G24330.1 GeneID:832503
KEGG:ath:AT5G24330 TAIR:At5g24330 eggNOG:NOG305320
HOGENOM:HOG000238747 InParanoid:Q9FNE9 OMA:VICPDRR PhylomeDB:Q9FNE9
ProtClustDB:CLSN2686326 Genevestigator:Q9FNE9 GermOnline:AT5G24330
GO:GO:0046976 Uniprot:Q9FNE9
Length = 349
Score = 116 (45.9 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 28/85 (32%), Positives = 43/85 (50%)
Query: 405 CQICKLTANEVETVVLCDACEKGFHLKCLQMNNQKGIPRGGEWHCMSCLKLSNGKPLPPK 464
C+ C + + ++LCD C+KGFHL CL+ +P+G W C SC K K P
Sbjct: 35 CEECS-SGKQPAKLLLCDKCDKGFHLFCLRPI-LVSVPKGS-WFCPSCSKHQIPKSFPLI 91
Query: 465 YGRVMRSINTTKMPSNTSVIQSPSD 489
+++ + P ++S I S SD
Sbjct: 92 QTKIIDFFRIKRSP-DSSQISSSSD 115
Score = 47 (21.6 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 607 VSNHSAASQPSHNSQVVRTDLANSAEVSLKNSHDSS 642
++NHS + N + VR ++ A V L + D S
Sbjct: 292 INNHSPEGRKKQNLKCVRFNINGEARVLLVANRDIS 327
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.312 0.129 0.379 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 823 795 0.00096 121 3 11 23 0.47 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 6
No. of states in DFA: 623 (66 KB)
Total size of DFA: 399 KB (2193 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 91.15u 0.11s 91.26t Elapsed: 00:00:05
Total cpu time: 91.15u 0.11s 91.26t Elapsed: 00:00:05
Start: Tue May 21 04:22:49 2013 End: Tue May 21 04:22:54 2013