BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003408
(822 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q922D4|PP6R3_MOUSE Serine/threonine-protein phosphatase 6 regulatory subunit 3 OS=Mus
musculus GN=Ppp6r3 PE=1 SV=1
Length = 844
Score = 257 bits (657), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 170/564 (30%), Positives = 301/564 (53%), Gaps = 59/564 (10%)
Query: 1 MFWRMAGLSTASPVETILDKENFTLEELLDEDDIIQECKALNGRLINFLRERAQVEQLIQ 60
MFW+ L ++S ++T+L++E+ TL+EL+DE+D++QECKA N +LI FL + +E L+
Sbjct: 1 MFWKF-DLHSSSHIDTLLEREDVTLKELMDEEDVLQECKAQNRKLIEFLLKAECLEDLVS 59
Query: 61 YIVVEAPEDAEKRRTFKFPFVACEIFTCEVDIILKTLVEDEELMNLLFSFLEPKDSHSTL 120
+I+ E P+D +++ +K+P ++CE+ T +V + L EDE L+ L+SFL + + L
Sbjct: 60 FIIEEPPQDMDEKIRYKYPNISCELLTSDVSQMNDRLGEDESLLMKLYSFLLNESPLNPL 119
Query: 121 LAGYFSKVVICLLLRKTVPLMHYIKAHQEIMARLVDLIGITSIMEVLIRLIGADEHMYTN 180
LA +FSKV+ L+ RK ++ ++K ++ + ++ IG ++IM++L+RL+ E
Sbjct: 120 LASFFSKVLSILISRKPEQIVDFLKKKRDFVDLIIKHIGTSAIMDLLLRLLTCIEPPQPR 179
Query: 181 FTESMQWIEDTNVLEMIVDKFSSSDSPEVHANAAETLCSITR------------SAPPAL 228
+ + W+ + +++ +V+ S + H+NA+++LC I R + P L
Sbjct: 180 -QDVLNWLNEERIIQRLVEIVHPSQEEDRHSNASQSLCEIVRLSRDQMLQVQNSTEPDPL 238
Query: 229 AAKISSPNFIGRLFRHALENSRPKSVLVNSLSICISLLDPKRLTL-GTYYMFNRQLTHGS 287
A + I +L + + +S +V+++ I ++LL+ +R T G + ++H S
Sbjct: 239 LATLEKQEIIEQLLSNIFHKEKNESAIVSAIQILLTLLETRRPTFEGHIEICPPGMSH-S 297
Query: 288 TVTVNPETVEGMLGRLGDLLKLLDVSSEESSLLTTYGKLQPPLGKHRLKIVEFISVLLTV 347
+VN +E + GRLG +LL ++S + TT+G L PP+G RL ++ IS LL
Sbjct: 298 ACSVNKSVLEAIRGRLGSFHELLLEPPKKSVMKTTWGILDPPVGNTRLNVIRLISSLLQT 357
Query: 348 GSEAAEKELIRHGAVRRILDLFFEYPYNNFLHHHVENIILSCLEC--KNAP--------- 396
+ + +L+ ++ ILD+FF+Y +NNFLH VE I L +NA
Sbjct: 358 NTSSINGDLMELNSIGVILDMFFKYTWNNFLHTQVEICIALILASPFENAENGTITDQDS 417
Query: 397 -----LIEHLLHECNLVGKILEAEKNFTLKDSNKPTVPAEGRLPPRIGNIGHLTRISNKL 451
L++HL +C L+ +ILEA D+N+ GR R G +GHLTRI+N +
Sbjct: 418 TGDNLLLKHLFQKCQLIERILEA------WDTNEKKQAEGGR---RHGYMGHLTRIANCI 468
Query: 452 IQ---LGNNNSEIHAYLQE-----NSEWNDWQINVL---SKRNTLE---NIYQWACGRPT 497
+ G N++ + +++ W + N L +KRNT++ + YQ
Sbjct: 469 VHSTDKGPNSALVQQLIKDLPDEVRERWETFCTNSLGETNKRNTVDLAFSDYQMQQMTSN 528
Query: 498 ALHDRG----RDSDDDDYQNRDYD 517
+ G + +D DD N +D
Sbjct: 529 FIDQFGFNDEKFADQDDIGNVSFD 552
>sp|Q5F471|PP6R3_CHICK Serine/threonine-protein phosphatase 6 regulatory subunit 3
OS=Gallus gallus GN=PPP6R3 PE=2 SV=1
Length = 873
Score = 255 bits (651), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 171/568 (30%), Positives = 300/568 (52%), Gaps = 61/568 (10%)
Query: 1 MFWRMAGLSTASPVETILDKENFTLEELLDEDDIIQECKALNGRLINFLRERAQVEQLIQ 60
MFW+ L ++S ++T+L++E+ TL+EL+DE+D++QECKA N +LI FL + +E L+
Sbjct: 1 MFWKF-DLHSSSHIDTLLEREDVTLKELMDEEDVLQECKAQNRKLIEFLLKSECLEDLVS 59
Query: 61 YIVVEAPEDAEKRRTFKFPFVACEIFTCEVDIILKTLVEDEELMNLLFSFLEPKDSHSTL 120
+I+ E P+D +++ +K+P ++CE+ T +V I L E+E L+ L+SFL + + L
Sbjct: 60 FIIEEPPQDMDEKIRYKYPNISCELLTSDVSQINDRLGEEESLLMKLYSFLLNESPLNPL 119
Query: 121 LAGYFSKVVICLLLRKTVPLMHYIKAHQEIMARLVDLIGITSIMEVLIRLIGADEHMYTN 180
LA +FSKV+ L+ RK ++ ++K + + ++ IG ++IM++L+RL+ E
Sbjct: 120 LASFFSKVLSILISRKPEQIVDFLKKKHDFVDLVIKHIGTSAIMDLLLRLLTCIEPPQPR 179
Query: 181 FTESMQWIEDTNVLEMIVDKFSSSDSPEVHANAAETLCSITR------------SAPPAL 228
E + W+ + +++ +V+ S + H+NA+++LC I R S P L
Sbjct: 180 -QEVLNWLNEERIIQRLVEIVHPSQDEDRHSNASQSLCEIIRLSRDQMLQVQNSSEPDPL 238
Query: 229 AAKISSPNFIGRLFRHALENSRPKSVLVNSLSICISLLDPKRLTLGTYYMFNRQLTHGST 288
A + I +L + + +S +V+++ I ++LL+ +R T + ST
Sbjct: 239 LASLEKREIIEQLLSNIFHKEKNESAIVSAIQILLTLLETRRQTFEGHIEICPPGMSNST 298
Query: 289 VTVNPETVEGMLGRLGDLLKLLDVSSEESSLLTTYGKLQPPLGKHRLKIVEFISVLLTVG 348
+VN +E + RL +LL ++S + TT+G L PP+G RL ++ IS LL
Sbjct: 299 YSVNKSVLEAIKARLSSFHELLLEPPKKSVMKTTWGVLDPPVGNTRLNVIRLISSLLQTN 358
Query: 349 SEAAEKELIRHGAVRRILDLFFEYPYNNFLHHHVEN----IILSCLECK----------- 393
+ + +ELI ++ ILD+FF+Y +NNFLH VE I+ S LE
Sbjct: 359 TSSVNQELIELNSIGVILDMFFKYTWNNFLHTQVEICIALILASPLESTENGTITDQDST 418
Query: 394 -NAPLIEHLLHECNLVGKILEAEKNFTLKDSNKPTVPAEGRLPPRIGNIGHLTRISNKLI 452
+ L++HL +C L+ +ILEA + N+ GR R G +GHLTRI+N ++
Sbjct: 419 GDNLLLKHLFLKCQLIERILEA------WEMNEKKQAEGGR---RHGYMGHLTRIANCIV 469
Query: 453 Q---LGNNNSEIHAYLQENSE-----WNDWQINVL---SKRNTLENIYQWACGRPTALHD 501
G N++ + ++E E W + + L +KRNT++ + T H
Sbjct: 470 HSTDKGPNSTLVQQLIKELPEEVRERWETFCTSSLGETNKRNTVDLV--------TTCHI 521
Query: 502 RGRDSDDDDYQNRDYDVAALANNLSQAF 529
D+ D++ + + ++L QAF
Sbjct: 522 HSSSDDEIDFKETGF---SQDSSLQQAF 546
>sp|Q8R3Q2|PP6R2_MOUSE Serine/threonine-protein phosphatase 6 regulatory subunit 2 OS=Mus
musculus GN=Ppp6r2 PE=1 SV=1
Length = 923
Score = 254 bits (649), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 160/504 (31%), Positives = 269/504 (53%), Gaps = 64/504 (12%)
Query: 1 MFWRMAGLSTASPVETILDKENFTLEELLDEDDIIQECKALNGRLINFLRERAQVEQLIQ 60
MFW+ L+T S V+ +LDKE+ TL+EL+DEDDI+QECKA N +L++FL + +E+L+
Sbjct: 1 MFWKF-DLNTTSHVDKLLDKEHVTLQELMDEDDILQECKAQNQKLLDFLCRQQCMEELVN 59
Query: 61 YIVVEAPEDAEKRRTFKFPFVACEIFTCEVDIILKTLVEDEELMNLLFSFLEPKDSHSTL 120
I + P+D E++ FK+P ACE+ TC+V I L EDE L+NLL+ FL+ + + L
Sbjct: 60 LITQDPPQDMEEKVRFKYPNTACELLTCDVPQISDRLGEDESLLNLLYDFLDQEPPLNPL 119
Query: 121 LAGYFSKVVICLLLRKTVPLMHYIKAHQEIMARLVDLIGITSIMEVLIRLIGADEHMYTN 180
LA +FSK + L+ RKT ++ ++K ++ +++L+ IG +++M++L+RL+ E +
Sbjct: 120 LASFFSKTIGNLIARKTEQVIMFLKKKEKFISQLLKHIGTSALMDLLLRLVSCVEPVGLR 179
Query: 181 FTESMQWIEDTNVLEMIVDKFSSSDSPEVHANAAETLCSITRSA------------PPAL 228
E + W+ + +++ +V + +NA++ LC I R P L
Sbjct: 180 -QEVLHWLNEEKIIQRLVALIHPHQDEDRQSNASQALCDIIRLGRDQGSQLQETVEPDPL 238
Query: 229 AAKISSPNFIGRLFRHALENSRPKSVLVNSLSICISLLDPKRL-TLGTYYMFNRQLTHGS 287
+ S + + +L ++ + + +S LV+ + + ++LL+P+R+ T G F++ L
Sbjct: 239 LITLESQDCVEQLLKNMFDGDQTESCLVSGMQVLLALLEPRRVGTEGLVDSFSQGLERSH 298
Query: 288 TVTVNPETVEGMLGRLGDLLKLLDVSSEESSLLTTYGKLQPPLGKHRLKIVEFISVLLTV 347
+V+ + + G+ L + +LL ++ ++LTT G L+ PLG RL ++ LL
Sbjct: 299 SVSSS--ILRGIEPWLKNFHQLLLNPPKKKAILTTIGVLEEPLGNARLHGARLMAALLHT 356
Query: 348 GSEAAEKELIRHGAVRRILDLFFEYPYNNFLHHHVENIILSCL--------------ECK 393
+ +EL R + +LDLFF+Y +NNFLH VE I + L + K
Sbjct: 357 NTPGINQELCRLNTMDLLLDLFFKYTWNNFLHLQVELCIAAILSHAAREEQAEASGSDGK 416
Query: 394 NAPL------------------------IEHLLHECNLVGKILEAEKNFTLKDSNKPTVP 429
PL + HL +C LV +ILEA ++N T
Sbjct: 417 VEPLQGSGDGNGKLETTPSITSPPENTMVTHLFQKCCLVQRILEA------WEANDHTQA 470
Query: 430 AEGRLPPRIGNIGHLTRISNKLIQ 453
A G R GN+GHLTRI+N ++Q
Sbjct: 471 AGGM---RRGNMGHLTRIANAVVQ 491
>sp|Q5H9R7|PP6R3_HUMAN Serine/threonine-protein phosphatase 6 regulatory subunit 3 OS=Homo
sapiens GN=PPP6R3 PE=1 SV=2
Length = 873
Score = 253 bits (645), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 167/569 (29%), Positives = 301/569 (52%), Gaps = 63/569 (11%)
Query: 1 MFWRMAGLSTASPVETILDKENFTLEELLDEDDIIQECKALNGRLINFLRERAQVEQLIQ 60
MFW+ L ++S ++T+L++E+ TL+EL+DE+D++QECKA N +LI FL + +E L+
Sbjct: 1 MFWKF-DLHSSSHIDTLLEREDVTLKELMDEEDVLQECKAQNRKLIEFLLKAECLEDLVS 59
Query: 61 YIVVEAPEDAEKRRTFKFPFVACEIFTCEVDIILKTLVEDEELMNLLFSFLEPKDSHSTL 120
+I+ E P+D +++ +K+P ++CE+ T +V + L EDE L+ L+SFL + L
Sbjct: 60 FIIEEPPQDMDEKIRYKYPNISCELLTSDVSQMNDRLGEDESLLMKLYSFLLNDSPLNPL 119
Query: 121 LAGYFSKVVICLLLRKTVPLMHYIKAHQEIMARLVDLIGITSIMEVLIRLIGADEHMYTN 180
LA +FSKV+ L+ RK ++ ++K + + ++ IG ++IM++L+RL+ E
Sbjct: 120 LASFFSKVLSILISRKPEQIVDFLKKKHDFVDLIIKHIGTSAIMDLLLRLLTCIEPPQPR 179
Query: 181 FTESMQWIEDTNVLEMIVDKFSSSDSPEVHANAAETLCSITR------------SAPPAL 228
+ + W+ + +++ +V+ S + H+NA+++LC I R + P L
Sbjct: 180 -QDVLNWLNEEKIIQRLVEIVHPSQEEDRHSNASQSLCEIVRLSRDQMLQIQNSTEPDPL 238
Query: 229 AAKISSPNFIGRLFRHALENSRPKSVLVNSLSICISLLDPKRLTL-GTYYMFNRQLTHGS 287
A + I +L + + +S +V+++ I ++LL+ +R T G + ++H S
Sbjct: 239 LATLEKQEIIEQLLSNIFHKEKNESAIVSAIQILLTLLETRRPTFEGHIEICPPGMSH-S 297
Query: 288 TVTVNPETVEGMLGRLGDLLKLLDVSSEESSLLTTYGKLQPPLGKHRLKIVEFISVLLTV 347
+VN +E + GRLG +LL ++S + TT+G L PP+G RL ++ IS LL
Sbjct: 298 ACSVNKSVLEAIRGRLGSFHELLLEPPKKSVMKTTWGVLDPPVGNTRLNVIRLISSLLQT 357
Query: 348 GSEAAEKELIRHGAVRRILDLFFEYPYNNFLHHHVENIILSCL-----ECKNAP------ 396
+ + +L+ ++ IL++FF+Y +NNFLH VE I L +NA
Sbjct: 358 NTSSINGDLMELNSIGVILNMFFKYTWNNFLHTQVEICIALILASPFENTENATITDQDS 417
Query: 397 -----LIEHLLHECNLVGKILEAEKNFTLKDSNKPTVPAEGRLPPRIGNIGHLTRISNKL 451
L++HL +C L+ +ILEA + N+ GR R G +GHLTRI+N +
Sbjct: 418 TGDNLLLKHLFQKCQLIERILEA------WEMNEKKQAEGGR---RHGYMGHLTRIANCI 468
Query: 452 IQ---LGNNNSEIHAYLQE-----NSEWNDWQINVL---SKRNTLENIYQWACGRPTALH 500
+ G N++ + +++ W + + L +KRNT++ + T H
Sbjct: 469 VHSTDKGPNSALVQQLIKDLPDEVRERWETFCTSSLGETNKRNTVDLV--------TTCH 520
Query: 501 DRGRDSDDDDYQNRDYDVAALANNLSQAF 529
D+ D++ + + ++L QAF
Sbjct: 521 IHSSSDDEIDFKETGF---SQDSSLQQAF 546
>sp|O75170|PP6R2_HUMAN Serine/threonine-protein phosphatase 6 regulatory subunit 2 OS=Homo
sapiens GN=PPP6R2 PE=1 SV=2
Length = 966
Score = 251 bits (641), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 160/502 (31%), Positives = 266/502 (52%), Gaps = 62/502 (12%)
Query: 1 MFWRMAGLSTASPVETILDKENFTLEELLDEDDIIQECKALNGRLINFLRERAQVEQLIQ 60
MFW+ L+T S V+ +LDKE+ TL+EL+DEDDI+QECKA N +L++FL + +E+L+
Sbjct: 1 MFWKF-DLNTTSHVDKLLDKEHVTLQELMDEDDILQECKAQNQKLLDFLCRQQCMEELVS 59
Query: 61 YIVVEAPEDAEKRRTFKFPFVACEIFTCEVDIILKTLVEDEELMNLLFSFLEPKDSHSTL 120
I + P D E++ FK+P ACE+ TC+V I L DE L++LL+ FL+ + + L
Sbjct: 60 LITQDPPLDMEEKVRFKYPNTACELLTCDVPQISDRLGGDESLLSLLYDFLDHEPPLNPL 119
Query: 121 LAGYFSKVVICLLLRKTVPLMHYIKAHQEIMARLVDLIGITSIMEVLIRLIGADEHMYTN 180
LA +FSK + L+ RKT ++ ++K + ++ ++ IG +++M++L+RL+ E
Sbjct: 120 LASFFSKTIGNLIARKTEQVITFLKKKDKFISLVLKHIGTSALMDLLLRLVSCVEPAGLR 179
Query: 181 FTESMQWIEDTNVLEMIVDKFSSSDSPEVHANAAETLCSITRSA------------PPAL 228
+ + W+ + V++ +V+ S + +NA++TLC I R P L
Sbjct: 180 -QDVLHWLNEEKVIQRLVELIHPSQDEDRQSNASQTLCDIVRLGRDQGSQLQEALEPDPL 238
Query: 229 AAKISSPNFIGRLFRHALENSRPKSVLVNSLSICISLLDPKRL-TLGTYYMFNRQLTHGS 287
+ S + + +L ++ + R +S LV+ + ++LL+ +R+ T G F++ L
Sbjct: 239 LTALESQDCVEQLLKNMFDGDRTESCLVSGTQVLLTLLETRRVGTEGLVDSFSQGLER-- 296
Query: 288 TVTVNPETVEGMLGRLGDLLKLLDVSSEESSLLTTYGKLQPPLGKHRLKIVEFISVLLTV 347
+ V+ + G+ RL D +LL ++ ++LTT G L+ PLG RL ++ LL
Sbjct: 297 SYAVSSSVLHGIEPRLKDFHQLLLNPPKKKAILTTIGVLEEPLGNARLHGARLMAALLHT 356
Query: 348 GSEAAEKELIRHGAVRRILDLFFEYPYNNFLHHHVENIILSCL--------------ECK 393
+ + +EL R + +LDLFF+Y +NNFLH VE I + L E +
Sbjct: 357 NTPSINQELCRLNTMDLLLDLFFKYTWNNFLHFQVELCIAAILSHAAREERTEASGSESR 416
Query: 394 NAP----------------------LIEHLLHECNLVGKILEAEKNFTLKDSNKPTVPAE 431
P ++ HL +C LV +ILEA ++N T A
Sbjct: 417 VEPPHENGNRSLETPQPAASLPDNTMVTHLFQKCCLVQRILEA------WEANDHTQAAG 470
Query: 432 GRLPPRIGNIGHLTRISNKLIQ 453
G R GN+GHLTRI+N ++Q
Sbjct: 471 GM---RRGNMGHLTRIANAVVQ 489
>sp|Q9UPN7|PP6R1_HUMAN Serine/threonine-protein phosphatase 6 regulatory subunit 1 OS=Homo
sapiens GN=PPP6R1 PE=1 SV=5
Length = 881
Score = 249 bits (635), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 166/573 (28%), Positives = 292/573 (50%), Gaps = 64/573 (11%)
Query: 1 MFWRMAGLSTASPVETILDKENFTLEELLDEDDIIQECKALNGRLINFLRERAQVEQLIQ 60
MFW+ L T+S ++T+L++E+ +L ELLDE+D++QECK +N +L++FL + ++ ++
Sbjct: 1 MFWKF-DLHTSSHLDTLLEREDLSLPELLDEEDVLQECKVVNRKLLDFLLQPPHLQAMVA 59
Query: 61 YIVVEAPEDAEKRRTFKFPFVACEIFTCEVDIILKTLVEDEELMNLLFSFLEPKDSHSTL 120
++ E P+ E+R +K+P VACEI T +V I L DE L+N L+ FL+ S + L
Sbjct: 60 WVTQEPPDSGEERLRYKYPSVACEILTSDVPQINDALGADESLLNRLYGFLQSTGSLNPL 119
Query: 121 LAGYFSKVVICLLLRKTVPLMHYIKAHQEIMARLVDLIGITSIMEVLIRLIGADEHMYTN 180
LA +FSKV+ L+ RKT L+ +++ + + L+ IG ++IM++L+RL+ E
Sbjct: 120 LASFFSKVMGILINRKTDQLVSFLRKKDDFVDLLLQHIGTSAIMDLLLRLLTCVERPQLR 179
Query: 181 FTESMQWIEDTNVLEMIVDKFSSSDSPEVHANAAETLCSITRSA------------PPAL 228
+ + W+ + +++ ++++ S H+NA+++LC I R + P L
Sbjct: 180 -QDVVNWLNEEKIVQRLIEQIHPSKDENQHSNASQSLCDIIRLSREQMIQVQDSPEPDQL 238
Query: 229 AAKISSPNFIGRLFRHALENSRPKSVLVNSLSICISLLDPKR-----LTLGTYY------ 277
A + I +L + E + +SV+V+ + + ++LL+P+R +T+ +++
Sbjct: 239 LATLEKQETIEQLLSNMFEGEQSQSVIVSGIQVLLTLLEPRRPRSESVTVNSFFSSVDGQ 298
Query: 278 --MFNRQLTHGSTVTVNPETVEGMLGRLGDLLKLLDVSSEESSLLTTYGKLQPPLGKHRL 335
+ + + +V + + RL +LL + L T+G L PPLG RL
Sbjct: 299 LELLAQGALESTVSSVG--ALHALRPRLSCFHQLLLEPPKLEPLQMTWGMLAPPLGNTRL 356
Query: 336 KIVEFISVLLTVGSEAAEKELIRHGAVRRILDLFFEYPYNNFLHHHVENIILSCLECK-- 393
+V+ ++ L+ A EL+ +LDLFF Y +NNFLH VE + + L
Sbjct: 357 HVVKLLASALSANDAALTHELLALDVPNTMLDLFFHYVFNNFLHAQVEGCVSTMLSLGPP 416
Query: 394 ---------NAPLIEHLLHECNLVGKILEAEKNFTLKDSNKPTVPAEGRLPPRIGNIGHL 444
P+++HLL +C LV +IL T + N A G PR G +GHL
Sbjct: 417 PDSSPETPIQNPVVKHLLQQCRLVERIL------TSWEENDRVQCAGG---PRKGYMGHL 467
Query: 445 TRISNKLIQ---LGNNNSEIHAYLQE-----NSEWNDWQINVLSKRNTLENIYQWACGRP 496
TR++ L+Q G N ++ L+E +W + L++ N +N+
Sbjct: 468 TRVAGALVQNTEKGPNAEQLRQLLKELPSEQQEQWEAFVSGPLAETNK-KNMVDL----- 521
Query: 497 TALHDRGRDSDDDDYQNRDYDVAALANNLSQAF 529
H SDD+D + ++++ A L QAF
Sbjct: 522 VNTHHLHSSSDDEDDRLKEFNFPEEA-VLQQAF 553
>sp|Q7TSI3|PP6R1_MOUSE Serine/threonine-protein phosphatase 6 regulatory subunit 1 OS=Mus
musculus GN=Ppp6r1 PE=1 SV=1
Length = 856
Score = 242 bits (617), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 169/575 (29%), Positives = 293/575 (50%), Gaps = 68/575 (11%)
Query: 1 MFWRMAGLSTASPVETILDKENFTLEELLDEDDIIQECKALNGRLINFLRERAQVEQLIQ 60
MFW+ L T+S ++T+L+KE+ +L ELLDE+D++QECK +N +L++FL + + ++ ++
Sbjct: 1 MFWKF-DLHTSSHLDTLLEKEDLSLPELLDEEDVLQECKVVNRKLLDFLLQPSHLQAMVA 59
Query: 61 YIVVEAPEDAEKRRTFKFPFVACEIFTCEVDIILKTLVEDEELMNLLFSFLEPKDSHSTL 120
++ E P E+R +K+P VACEI T +V I L DE L+N L+ FL+ DS + L
Sbjct: 60 WVTQEPPASGEERLRYKYPSVACEILTSDVPQINDALGADESLLNRLYGFLQSGDSLNPL 119
Query: 121 LAGYFSKVVICLLLRKTVPLMHYIKAHQEIMARLVDLIGITSIMEVLIRLIGADEHMYTN 180
LA +FSKV+ L+ RKT L+ +++ + + L+ IG ++IM++L+RL+ E
Sbjct: 120 LASFFSKVMGILINRKTDQLVSFLRKKDDFVDLLLRHIGTSAIMDLLLRLLTCVERPQLR 179
Query: 181 FTESMQWIEDTNVLEMIVDKFSSSDSPEVHANAAETLCSITRSA------------PPAL 228
+ W+ + +++ ++++ S H+NA+++LC I R + P L
Sbjct: 180 -QDVFNWLNEEKIVQRLIEQIHPSKDDNQHSNASQSLCDIIRLSREQMIQGQDSPEPDQL 238
Query: 229 AAKISSPNFIGRLFRHALENSRPKSVLVNSLSICISLLDPKRLTLGTYYMFN-------- 280
A + I +L + E + +SV+V+ + + ++LL+P+R + M N
Sbjct: 239 LATLEKQETIEQLLSNMFEGEQCQSVIVSGIQVLLTLLEPRRPRSDSVTMNNFFSSVDGQ 298
Query: 281 -RQLTHGST--VTVNPETVEGMLGRLGDLLKLLDVSSEESSLLTTYGKLQPPLGKHRLKI 337
L G+ + + + RL +LL + L T+G L PPLG RL +
Sbjct: 299 LELLAQGALDDALSSMGALHALRPRLDRFHQLLLEPPKLEPLQMTWGSLAPPLGNTRLHV 358
Query: 338 VEFISVLLTVGSEAAEKELIRHGAVRRILDLFFEYPYNNFLHHHVENIILSCLECKNA-- 395
V+ ++ L+ + A +EL+ +LDLFF Y +NNFLH VE + + L
Sbjct: 359 VKLLASALSANAAALTQELLVLDVPNTLLDLFFHYVFNNFLHAQVEVCVSAMLSSGPPPD 418
Query: 396 ---------PLIEHLLHECNLVGKILEA-EKNFTLKDSNKPTVPAEGRLPPRIGNIGHLT 445
P+++HLL C LV +IL + E+N ++ PR G +GHLT
Sbjct: 419 SSSETPVPNPIVKHLLQHCRLVERILASWEENDRVQSGGG----------PRKGYMGHLT 468
Query: 446 RISNKLIQ---LGNNNSEIHAYLQE--NSEWNDWQINV------LSKRNTLENIYQWACG 494
R++N ++Q G N ++ L+E + W+ V +K+NT++ +
Sbjct: 469 RVANAVVQNAEQGPNAEQLGQLLKELPEEQQQRWEAFVSGPLAETNKKNTVDLVNT---- 524
Query: 495 RPTALHDRGRDSDDDDYQNRDYDVAALANNLSQAF 529
H SDD+D + ++++ A L QAF
Sbjct: 525 -----HHLHSSSDDEDDRLKEFNFPEEA-VLQQAF 553
>sp|Q6NRF1|P6R3B_XENLA Serine/threonine-protein phosphatase 6 regulatory subunit 3-B
OS=Xenopus laevis GN=ppp6r3-b PE=2 SV=1
Length = 850
Score = 233 bits (595), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 154/525 (29%), Positives = 274/525 (52%), Gaps = 50/525 (9%)
Query: 1 MFWRMAGLSTASPVETILDKENFTLEELLDEDDIIQECKALNGRLINFLRERAQVEQLIQ 60
MFW+ L ++S ++T+L+++ TL+EL+DE+DI+QECKA N +L+ FL + +E L+
Sbjct: 1 MFWKF-DLHSSSHIDTLLERDEVTLKELMDEEDILQECKAQNRKLVEFLLKSECLEDLVT 59
Query: 61 YIVVEAPEDAEKRRTFKFPFVACEIFTCEVDIILKTLVEDEELMNLLFSFLEPKDSHSTL 120
+I E P+D +++ +K+P ++CE+ T +V I L EDE L+ L++FL + L
Sbjct: 60 FITEEPPQDMDEKIRYKYPNLSCELLTSDVSQINDRLGEDETLLKRLYAFLLNDPPLNPL 119
Query: 121 LAGYFSKVVICLLLRKTVPLMHYIKAHQEIMARLVDLIGITSIMEVLIRLIGADEHMYTN 180
LA +FSKV+ L+ RK ++ ++K + + ++ IG ++IM++L+RL+ E
Sbjct: 120 LASFFSKVLSILISRKPEQIVAFLKKKDDFVNLIIKHIGTSAIMDLLLRLLTCIEPPQLR 179
Query: 181 FTESMQWIEDTNVLEMIVDKFSSSDSPEVHANAAETLCSITR------------SAPPAL 228
+ + W+ + +++ +VD S + H+NA+++LC I R S P L
Sbjct: 180 -QDVLNWLNEEKIIQRLVDIVHPSQDEDRHSNASQSLCEIIRLSRDQMLQVQNSSEPDPL 238
Query: 229 AAKISSPNFIGRLFRHALENSRPKSVLVNSLSICISLLDPKRLTLGTYYMFNRQLTHGST 288
A + + + +L + + +S +V+++ I ++LL+ +R + + S
Sbjct: 239 LATLENKEILEQLLSNIFLKEKNESAIVSAIQILLTLLETRRPAFEGHIDLCPPGVNHSV 298
Query: 289 VTVNPETVEGMLGRLGDLLKLLDVSSEESSLLTTYGKLQPPLGKHRLKIVEFISVLLTVG 348
+VN + + RL +LL + + TT+G L PP+G RL ++ I+ LL
Sbjct: 299 FSVNKNVLAAIQERLPSFHQLLLDPPKTGVMKTTWGILDPPVGNTRLNVIRLIASLLQTN 358
Query: 349 SEAAEKELIRHGAVRRILDLFFEYPYNNFLHHHVENIILSCL----------------EC 392
+ +ELI + ILD+FF+Y +NNFLH VE I L
Sbjct: 359 THTINEELIELNTMGVILDMFFKYSWNNFLHTQVEICIALILASPGDSPEHSTISEENSA 418
Query: 393 KNAPLIEHLLHECNLVGKILEAEKNFTLKDSNKPTVPAEGRLPPRIGNIGHLTRISNKL- 451
+ L++HL +C+L+ +ILEA + + + + +EG R G +GHLTRI N +
Sbjct: 419 GDHVLLKHLFLKCHLIDRILEA---WAMNEKRQ----SEG--GQRYGYMGHLTRIVNCIV 469
Query: 452 --IQLGNNNSEIHAYLQE-----NSEWNDWQINVLS---KRNTLE 486
I+ G N+ H +++ W + + LS KRNT++
Sbjct: 470 HSIEKGPNSVLAHQLVKDLPTDAQERWETFCTSSLSETNKRNTVD 514
>sp|Q6NRI0|P6R3A_XENLA Serine/threonine-protein phosphatase 6 regulatory subunit 3-A
OS=Xenopus laevis GN=ppp6r3-a PE=2 SV=1
Length = 852
Score = 232 bits (591), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 154/525 (29%), Positives = 280/525 (53%), Gaps = 50/525 (9%)
Query: 1 MFWRMAGLSTASPVETILDKENFTLEELLDEDDIIQECKALNGRLINFLRERAQVEQLIQ 60
MFW+ L ++S ++T+L+++ TL+EL+DE+DI+QECKA N +L+ FL + +E L+
Sbjct: 1 MFWKF-DLHSSSHIDTLLERDEVTLKELMDEEDILQECKAQNRKLVEFLLKAECLEDLVT 59
Query: 61 YIVVEAPEDAEKRRTFKFPFVACEIFTCEVDIILKTLVEDEELMNLLFSFLEPKDSHSTL 120
+I E P+D +++ +K+P ++CE+ T +V I L EDE L+ L++FL + L
Sbjct: 60 FITEEPPQDMDEKIRYKYPNLSCELLTSDVSQINDRLGEDESLLKRLYAFLLNDPPLNPL 119
Query: 121 LAGYFSKVVICLLLRKTVPLMHYIKAHQEIMARLVDLIGITSIMEVLIRLIGADEHMYTN 180
LA +FSKV+ L+ RK ++ ++K + + ++ IG ++IM++L+RL+ E
Sbjct: 120 LASFFSKVLSILISRKPEQIVAFLKQKDDFVNLIIKHIGTSAIMDLLLRLLTCIEPPQLR 179
Query: 181 FTESMQWIEDTNVLEMIVDKFSSSDSPEVHANAAETLCSITR------------SAPPAL 228
+ + W+ + +++ +V+ S + H+NA+++LC I R S P L
Sbjct: 180 -QDVLNWLNEEKIIQRLVEIVHPSQDEDRHSNASQSLCEIIRLSRDQMLQVQNSSEPDPL 238
Query: 229 AAKISSPNFIGRLFRHALENSRPKSVLVNSLSICISLLDPKRLTLGTYYMFNRQLTHGST 288
A + + +L + + +S +V+++ I ++LL+ +R + + S
Sbjct: 239 LATLEKKEILEQLLSNIFLKEKNESAIVSAIQILLTLLETRRPAFEGHIDLCPPGVNYSA 298
Query: 289 VTVNPETVEGMLGRLGDLLKLLDVSSEESSLLTTYGKLQPPLGKHRLKIVEFISVLLTVG 348
+VN + + RL +LL + + TT+G L PP+G RL ++ I+ LL
Sbjct: 299 FSVNKNVLAAIQERLPSFHQLLLDPPKTGVMKTTWGILDPPVGNTRLNVIRLIASLLQTN 358
Query: 349 SEAAEKELIRHGAVRRILDLFFEYPYNNFLHHHVE---NIIL---------SCLECKNAP 396
+ + +ELI + ILD+FF+Y +NNFLH VE +IL S + +N+
Sbjct: 359 THSINEELIELNTMGVILDMFFKYSWNNFLHTQVEICLALILASPGDSPEHSTISEQNST 418
Query: 397 ----LIEHLLHECNLVGKILEAEKNFTLKDSNKPTVPAEGRLPPRIGNIGHLTRISNKL- 451
L++HL +C+L+ +ILEA + + + + +EG R G +GHLTRI+N +
Sbjct: 419 GDHVLLKHLFLKCHLIDRILEA---WAMNEKRQ----SEG--GQRYGYMGHLTRIANCIV 469
Query: 452 --IQLGNNNSEIHAYLQE-----NSEWNDWQINVL---SKRNTLE 486
I+ G N+ H +++ W + + L +KRNT++
Sbjct: 470 HSIEKGPNSVLAHQLIKDLPTDAQERWETFCTSSLGETNKRNTVD 514
>sp|O74511|EKC1_SCHPO Extragenic suppressor of kinetochore protein 1
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=ekc1 PE=1 SV=2
Length = 838
Score = 111 bits (277), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 99/374 (26%), Positives = 179/374 (47%), Gaps = 32/374 (8%)
Query: 1 MFWRMA---GLSTASPVETILDK--ENFTLEELLDEDDIIQECKALNGRLINFLRERAQV 55
MFWR+ G ++S +E ILDK + L+ELL+E+ ++ ECK+ N +L+ +L + +
Sbjct: 1 MFWRLGQGFGFQSSSAIEAILDKPEDEINLKELLEENGVLDECKSHNPKLLEYLCKPEVL 60
Query: 56 EQLIQYIV----VEAPE---DAEKRRTFKFPFVACEIFTCEVDIILKTLVEDEELMNLLF 108
QLI YI+ E P E+ + ++A EI + +V I + VE++ LM L+
Sbjct: 61 SQLIDYILEVDETEIPSADGGYEEPEHTRLSYIASEILSSDVWSICEACVENKTLMVKLW 120
Query: 109 SFLEPKDSHSTLLAGYFSKVVICLLLRKTVPLMHYIKAHQEIMARLVDLIGITSIMEVLI 168
SFL+ + + L A YF+KV L +KT + +I++ + +++ ++IM++L+
Sbjct: 121 SFLDSEGPLNPLQASYFAKVNEHFLDKKTEETVAFIQSIDNFVEKILRHAETSAIMDLLL 180
Query: 169 RLIGADEHMYTNFTESMQWIEDTNVLEMIVDKFSSSDSPEVHANAAETLCSITRSA---- 224
+ I D W+ +++ ++ S P+V A+ + +I +
Sbjct: 181 KFISMDR--CNTAIGIADWLYSQGLIQSLLRLLSPYVDPDVQFTVADVIKAIIAISANSN 238
Query: 225 ------PPALAAKISSPNFIGRLFRHALENSRPKSV--LVNSLSICISLLDPKRLTLGTY 276
P +L+ ++ S I L + ++ P S L+N +SI I L+
Sbjct: 239 EPGVIGPNSLSRELVSRQTITTLTDYMTDSKAPHSATSLINGVSIVIELIRKNNSDYDVT 298
Query: 277 YMFNRQLTHGSTVTVNPETVEGMLGRLGDLL----KLLDVSSEESSLL-TTYGKLQPPLG 331
+ L T +P + ML + + K+L S ES L+ T++GK++ PLG
Sbjct: 299 PVLQMPLDTHPPTTRDPIYLGTMLRLFAEKIPVFQKILLKPSTESDLMPTSFGKIK-PLG 357
Query: 332 KHRLKIVEFISVLL 345
R +I E + LL
Sbjct: 358 FERFRICELYAELL 371
Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 54/105 (51%), Gaps = 13/105 (12%)
Query: 355 ELIRHGAVRRILDLFFEYPYNNFLHHHVENIILSCLEC-----KNAPLIEHLLHECNLVG 409
E I++ + ILD FF+YP+NNFLH+ V +++ L +N L + + +
Sbjct: 519 EFIQNNVIPTILDHFFDYPWNNFLHNVVYDVVQQVLNAPMDKDQNYALAVDMFKQGKITE 578
Query: 410 KILEAEKNFTLKDSNKPTVPAEGRLPPRIGNIGHLTRISNKLIQL 454
KI+ ++ K KP+ R G +GHLT I++++++
Sbjct: 579 KIVYGQE-LNDKKVAKPS-------GFRAGYMGHLTIIADEVVKF 615
>sp|P40856|SA185_YEAST SIT4-associating protein SAP185 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=SAP185 PE=1 SV=1
Length = 1058
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 74/328 (22%), Positives = 136/328 (41%), Gaps = 40/328 (12%)
Query: 64 VEAPEDAEKRRTFKFPFVACEIFTCEVDIILKTLVEDEELMNLLFSFLEPKDSHSTLLAG 123
V P + E+ + +A EI + +V I L+E+E L+ L+S L S +
Sbjct: 194 VTLPHELEEHDDTRRARIAAEILSADVWPISSALIENEGLLAKLWSILRLPSPLSIEAST 253
Query: 124 YFSKVVICLLLRKTVPLMHYIKAHQEIMARLVDLIGITSIMEVLIRLIGADEHMYTNFTE 183
YF K+ LL ++ +I + I+ + I +M+ L+++I D+ +N
Sbjct: 254 YFMKINERLLDMNMDGIIEFILKKEHIVDDFLAHIDNPPLMDFLLKVISTDKPEISNGV- 312
Query: 184 SMQWIEDTNVLEMIV---DKFSSSDSPEVHANAAETLCSITRSAPPALAAKIS------- 233
+Q + N++ ++ D S + + + L +I+ + P + + I
Sbjct: 313 -IQLFKKQNLVPKLIHLLDPVFDSCTQSAAGDFLKALVTISGNCPNEITSSIGPNELTRQ 371
Query: 234 --SPNFIGRLFRHALENSRPKSVLVNSLSICISLLDPKRLTLGTYYMFNRQLTHGSTVTV 291
SPN + +L L+ L N + I I L+ T T+ +T+
Sbjct: 372 LVSPNMMKQLMDIMLKGGNS---LNNGVGIIIELIRKNNSDYDTIQ------TNYTTIES 422
Query: 292 NPET----------VEGMLGRLGDLLKLLDVSSEESSLLTTYGKLQPPLGKHRLKIVEFI 341
+P T V+ + D K+L + L T+YG ++ PLG R KI E I
Sbjct: 423 HPPTDRDPIYLGYLVKMFSEHMADFNKIL-TEKKIPLLQTSYGTIE-PLGFERFKICELI 480
Query: 342 SVLL-----TVGSEAAEKELIRHGAVRR 364
+ LL T+ +E + +++R R
Sbjct: 481 AELLHCSNMTLLNEPSAYDIVRERDAER 508
Score = 39.3 bits (90), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 50/112 (44%), Gaps = 21/112 (18%)
Query: 361 AVRRILDLFFEYPYNNFLHHHVENIILSCLE-----CKNAPLIEHLLHECNLVGKILEAE 415
+ +L++FF + +NNFLH+ V +++ N L++ LL L I+
Sbjct: 641 VIDTMLEMFFHFQWNNFLHNVVYDVVQQIFNGPLKIGYNRFLLDDLLINIRLTDMII--- 697
Query: 416 KNFTLKDSNKPTVPAEGRLPPRIGNIGHLTRISNKLIQLGNNNSEIHAYLQE 467
+ N + E R+G +GHLT I+ ++ + AY++E
Sbjct: 698 ------NGNNECIEYEKGHDTRLGYMGHLTLIAEEVTKFT-------AYIEE 736
>sp|P43612|SA155_YEAST SIT4-associating protein SAP155 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=SAP155 PE=1 SV=4
Length = 1002
Score = 50.4 bits (119), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 153/317 (48%), Gaps = 45/317 (14%)
Query: 81 VACEIFTCEVDIILKTLVEDEELMNLLFSFL-EPK-DSHSTLLAGYFSKVVICLLLRKTV 138
+ EIF+ ++ +I ++LV+++ +N ++S + +P +S ++ L F K+ LLL +
Sbjct: 284 IISEIFSLDIWLISESLVKNQSYLNKIWSIINQPNFNSENSPLVPIFLKINQNLLLTRQD 343
Query: 139 PLMHYIKAHQEIMARLVDLIGITSIMEVLIRLIGADEHMYTNFTESMQWIEDTNVLEMIV 198
+++I+ + + ++ + I+ +M+ +++I D+ + T ++ + D N++ +
Sbjct: 344 QYLNFIRTERSFVDDMLKHVDISLLMDFFLKIISTDK--IESPTGIIELVYDQNLISKCL 401
Query: 199 DKFSSSDSP-EVHA---NAAETLCSITRSAP--------PALAAKISSPNFIGRLFRHAL 246
++ +SP ++ A + + L +I+ +AP +L +++SP I +L +
Sbjct: 402 SFLNNKESPADIQACVGDFLKALIAISANAPLDDISIGPNSLTRQLASPESIAKLV-DIM 460
Query: 247 ENSRPKSVLVNSLSICISLLDPKRLTLGTYYMFNRQLTHGSTVTVNPETVE-----GMLG 301
N R + L ++SI I L+ R Y N T T+ +P + G L
Sbjct: 461 INQRG-AALNTTVSIVIELI---RKNNSDYDQVNLLTT---TIKTHPPSNRDPIYLGYLL 513
Query: 302 R-----LGDLLKL-LDVSSEESSLL---TTYGKLQPPLGKHRLKIVEFISVLL------T 346
R L D ++ LD+ ++ + L + K +P LG R K+VE I+ LL
Sbjct: 514 RKFSNHLSDFFQIILDIENDANIPLHENQLHEKFKP-LGFERFKVVELIAELLHCSNMGL 572
Query: 347 VGSEAAEKELIRHGAVR 363
+ S+ AE+ R VR
Sbjct: 573 MNSKRAERIARRRDKVR 589
>sp|Q8CQD9|PLS_STAES Accumulation-associated protein OS=Staphylococcus epidermidis (strain
ATCC 12228) GN=SE_0175 PE=4 SV=1
Length = 1469
Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%)
Query: 737 SKPSEPSESGSPSEPAESGTPSEPAESGTPSEPAESGTPSEPSESVDGNHPS 788
KP+EP + P +PAE GTP+EP + P +PAE G P+EP + + P+
Sbjct: 1306 GKPAEPGKPAEPGKPAEPGTPAEPGKPAEPGKPAEPGKPAEPGKPAEPGKPA 1357
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Query: 708 EPSPSSSNTEDANITTTGELSKSIDENPSSKPSEPSESGSPSEP---AESGTPSEPAESG 764
EP + + A T E K + ++P +P+E G P+EP AE GTP+EP +
Sbjct: 1310 EPGKPAEPGKPAEPGTPAEPGKPAEPGKPAEPGKPAEPGKPAEPGKPAEPGTPAEPGKPA 1369
Query: 765 TPSEPAESGTPSEPSESVDGNHPS 788
P +PAE G P+EP + P+
Sbjct: 1370 EPGKPAEPGKPAEPGTPAEPGKPA 1393
Score = 48.1 bits (113), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 726 ELSKSIDENPSSKPSEPSESGSPSEPAESGTPSEPAESGTPSEP---AESGTPSEPSESV 782
E K + ++P P+E G P+EP + P +PAE GTP+EP AE GTP+EP +
Sbjct: 1346 EPGKPAEPGKPAEPGTPAEPGKPAEPGKPAEPGKPAEPGTPAEPGKPAEPGTPAEPGKPA 1405
Query: 783 DGNHPS 788
+ P+
Sbjct: 1406 EPGTPT 1411
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 708 EPSPSSSNTEDANITTTGELSKSIDENPSSKPSEPSESGSPSE---PAESGTPSEPAESG 764
EP + + A T E K + ++P +P+E G+P+E PAE GTP+EP +
Sbjct: 1346 EPGKPAEPGKPAEPGTPAEPGKPAEPGKPAEPGKPAEPGTPAEPGKPAEPGTPAEPGKPA 1405
Query: 765 TPSEPAESGTPSEPSESV 782
P P +SG P +P+ S+
Sbjct: 1406 EPGTPTQSGAPEQPNRSM 1423
>sp|B5VMH6|SA190_YEAS6 SIT4-associating protein SAP190 OS=Saccharomyces cerevisiae (strain
AWRI1631) GN=SAP190 PE=3 SV=1
Length = 1033
Score = 47.0 bits (110), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 82/189 (43%), Gaps = 33/189 (17%)
Query: 365 ILDLFFEYPYNNFLHHHVENIILSCLE-----CKNAPLIEHLLHECNLVGKILEAEKNFT 419
ILD+F E+P+NNFLH+ + +I N L++ L + L KI++A+K
Sbjct: 636 ILDMFTEFPWNNFLHNVIFDIAQQIFNGPLKTGYNRFLLKDYLVDAYLTKKIVDADK--A 693
Query: 420 LKDSNKPTVPAEGRLPPRIGNIGHLTRISNKL---------IQLGNNNSEIHAYLQENSE 470
+D K T R G +GHLT ++ ++ ++L N+ + L+E
Sbjct: 694 CQDYEKKT-------GLRYGYMGHLTLVAEEISKFKEYIDEMKLTFCNTAVSDRLEE-PF 745
Query: 471 WNDWQINVLSKRNTLENIYQWACGRPTALHDRGRDSDDDDYQNRDYDVAALANNLSQAFR 530
W ++ +L+ N T L D G D + DD R+ D + +
Sbjct: 746 WKEYSETILADTREKYN---------TVLGDFGNDQESDDDVIRNSDSEDIIGDTEGNEN 796
Query: 531 YGIYSNDDV 539
YG ND++
Sbjct: 797 YGNGENDEL 805
Score = 42.4 bits (98), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 131/303 (43%), Gaps = 39/303 (12%)
Query: 65 EAPEDAEKRRTFKFPFVACEIFTCEVDIILKTLVEDEELMNLLFSFLEPKDSHSTLLAGY 124
E+ E E RR +A EI + +V I ++++++L+ L+S L+ + Y
Sbjct: 206 ESEEQVETRRAR----IAAEILSADVWPISAAIMQNKDLLGRLWSILDHPAPLPIPASTY 261
Query: 125 FSKVVICLLLRKTVPLMHYIKAHQEIMARLVDLIGITSIMEVLIRLIGADEHMYTNFTES 184
F K+ LL ++ +I + ++AR + + S+M+ L+++I D+ + T
Sbjct: 262 FMKINERLLDMDITGMLEFILSRDSLVARFLTHVDNPSLMDFLLKVISTDKP--DSPTGV 319
Query: 185 MQWIEDTNVLEMIVDKFSSSDSPEVHANAAETLCS-ITRS-----------APPALAAKI 232
++ ++ ++ ++D + + A + + + +T S P L ++
Sbjct: 320 IKILKSQELIPKLLDHLNPEYGISTQSAAGDFIKAFVTLSTNSSNELASGIGPNELTRQL 379
Query: 233 SSPNFIGRLFRHALENSRPKSVLVNSLSICISLLDPKRLTLGTYYMFNRQLTHGSTVTVN 292
S I +L + L+ + L N + I I L+ R Y QL + +T+ +
Sbjct: 380 VSEEMIEKLIKIMLKGG---TSLSNGVGIIIELI---RKNNSDYDFI--QLVY-TTLESH 430
Query: 293 PET----------VEGMLGRLGDLLKLLDVSSEESSLLTTYGKLQPPLGKHRLKIVEFIS 342
P T V+ + D +LD ++ + +G ++ PLG R KI E I+
Sbjct: 431 PPTDRDPIHLIHLVKLFAKHMPDFADMLD-KTKLPLMEMPFGNIE-PLGFERFKICELIA 488
Query: 343 VLL 345
LL
Sbjct: 489 ELL 491
>sp|P36123|SA190_YEAST SIT4-associating protein SAP190 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=SAP190 PE=1 SV=2
Length = 1033
Score = 46.6 bits (109), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 82/189 (43%), Gaps = 33/189 (17%)
Query: 365 ILDLFFEYPYNNFLHHHVENIILSCLE-----CKNAPLIEHLLHECNLVGKILEAEKNFT 419
ILD+F E+P+NNFLH+ + +I N L++ L + L KI++A+K
Sbjct: 636 ILDMFTEFPWNNFLHNVIFDIAQQIFNGPLKTGYNRFLLKDYLVDAYLTKKIVDADK--A 693
Query: 420 LKDSNKPTVPAEGRLPPRIGNIGHLTRISNKL---------IQLGNNNSEIHAYLQENSE 470
+D K T R G +GHLT ++ ++ ++L N+ + L+E
Sbjct: 694 CQDYEKKT-------GLRYGYMGHLTLVAEEISKFKEYIDEMKLTFCNTAVSDRLEE-PF 745
Query: 471 WNDWQINVLSKRNTLENIYQWACGRPTALHDRGRDSDDDDYQNRDYDVAALANNLSQAFR 530
W ++ +L+ N T L D G D + DD R+ D + +
Sbjct: 746 WKEYSETILADTREKYN---------TVLGDFGNDQESDDDVIRNSDSEDIIGDTEGNEN 796
Query: 531 YGIYSNDDV 539
YG ND++
Sbjct: 797 YGNGENDEL 805
Score = 42.4 bits (98), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 131/303 (43%), Gaps = 39/303 (12%)
Query: 65 EAPEDAEKRRTFKFPFVACEIFTCEVDIILKTLVEDEELMNLLFSFLEPKDSHSTLLAGY 124
E+ E E RR +A EI + +V I ++++++L+ L+S L+ + Y
Sbjct: 206 ESEEQVETRRAR----IAAEILSADVWPISAAIMQNKDLLGRLWSILDHPAPLPIPASTY 261
Query: 125 FSKVVICLLLRKTVPLMHYIKAHQEIMARLVDLIGITSIMEVLIRLIGADEHMYTNFTES 184
F K+ LL ++ +I + ++AR + + S+M+ L+++I D+ + T
Sbjct: 262 FMKINERLLDMDITGMLEFILSRDSLVARFLTHVDNPSLMDFLLKVISTDKP--DSPTGV 319
Query: 185 MQWIEDTNVLEMIVDKFSSSDSPEVHANAAETLCS-ITRS-----------APPALAAKI 232
++ ++ ++ ++D + + A + + + +T S P L ++
Sbjct: 320 IKILKSQELIPKLLDHLNPEYGISTQSAAGDFIKAFVTLSTNSSNELASGIGPNELTRQL 379
Query: 233 SSPNFIGRLFRHALENSRPKSVLVNSLSICISLLDPKRLTLGTYYMFNRQLTHGSTVTVN 292
S I +L + L+ + L N + I I L+ R Y QL + +T+ +
Sbjct: 380 VSEEMIEKLIKIMLKGG---TSLSNGVGIIIELI---RKNNSDYDFI--QLVY-TTLESH 430
Query: 293 PET----------VEGMLGRLGDLLKLLDVSSEESSLLTTYGKLQPPLGKHRLKIVEFIS 342
P T V+ + D +LD ++ + +G ++ PLG R KI E I+
Sbjct: 431 PPTDRDPIHLIHLVKLFAKHMPDFADMLD-KTKLPLMEMPFGNIE-PLGFERFKICELIA 488
Query: 343 VLL 345
LL
Sbjct: 489 ELL 491
>sp|C8ZCJ2|SA190_YEAS8 SIT4-associating protein SAP190 OS=Saccharomyces cerevisiae (strain
Lalvin EC1118 / Prise de mousse) GN=SAP190 PE=3 SV=1
Length = 1033
Score = 44.7 bits (104), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 81/189 (42%), Gaps = 33/189 (17%)
Query: 365 ILDLFFEYPYNNFLHHHVENIILSCLE-----CKNAPLIEHLLHECNLVGKILEAEKNFT 419
ILD+F E+P+NNFLH+ + +I N L++ L + L KI++A+K
Sbjct: 636 ILDMFTEFPWNNFLHNVIFDIAQQIFNGPLKTGYNRFLLKDYLVDAYLTKKIVDADK--A 693
Query: 420 LKDSNKPTVPAEGRLPPRIGNIGHLTRISNKL---------IQLGNNNSEIHAYLQENSE 470
+D K T R G +GHLT ++ ++ ++L N+ + +E
Sbjct: 694 CQDYEKKT-------GLRHGYMGHLTLVAEEISKFKEYIDEMKLTFCNTAVSDRFEE-PF 745
Query: 471 WNDWQINVLSKRNTLENIYQWACGRPTALHDRGRDSDDDDYQNRDYDVAALANNLSQAFR 530
W ++ +L+ N T L D G D + DD R+ D + +
Sbjct: 746 WKEYSETILADTREKYN---------TVLGDFGNDQESDDDVIRNSDSEDIIGDTEGNEN 796
Query: 531 YGIYSNDDV 539
YG ND++
Sbjct: 797 YGNGENDEL 805
Score = 42.4 bits (98), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 131/303 (43%), Gaps = 39/303 (12%)
Query: 65 EAPEDAEKRRTFKFPFVACEIFTCEVDIILKTLVEDEELMNLLFSFLEPKDSHSTLLAGY 124
E+ E E RR +A EI + +V I ++++++L+ L+S L+ + Y
Sbjct: 206 ESEEQVETRRAR----IAAEILSADVWPISAAIMQNKDLLGRLWSILDHPAPLPIPASTY 261
Query: 125 FSKVVICLLLRKTVPLMHYIKAHQEIMARLVDLIGITSIMEVLIRLIGADEHMYTNFTES 184
F K+ LL ++ +I + ++AR + + S+M+ L+++I D+ + T
Sbjct: 262 FMKINERLLDMDITGMLEFILSRDSLVARFLTHVDNPSLMDFLLKVISTDKP--DSPTGV 319
Query: 185 MQWIEDTNVLEMIVDKFSSSDSPEVHANAAETLCS-ITRS-----------APPALAAKI 232
++ ++ ++ ++D + + A + + + +T S P L ++
Sbjct: 320 IKILKSQELIPKLLDHLNPEYGISTQSAAGDFIKAFVTLSTNSSNELASGIGPNELTRQL 379
Query: 233 SSPNFIGRLFRHALENSRPKSVLVNSLSICISLLDPKRLTLGTYYMFNRQLTHGSTVTVN 292
S I +L + L+ + L N + I I L+ R Y QL + +T+ +
Sbjct: 380 VSEEMIEKLIKIMLKGG---TSLSNGVGIIIELI---RKNNSDYDFI--QLVY-TTLESH 430
Query: 293 PET----------VEGMLGRLGDLLKLLDVSSEESSLLTTYGKLQPPLGKHRLKIVEFIS 342
P T V+ + D +LD ++ + +G ++ PLG R KI E I+
Sbjct: 431 PPTDRDPIHLIHLVKLFAKHMPDFADMLD-KTKLPLMEMPFGNIE-PLGFERFKICELIA 488
Query: 343 VLL 345
LL
Sbjct: 489 ELL 491
>sp|Q63870|CO7A1_MOUSE Collagen alpha-1(VII) chain OS=Mus musculus GN=Col7a1 PE=2 SV=3
Length = 2944
Score = 42.0 bits (97), Expect = 0.023, Method: Composition-based stats.
Identities = 25/89 (28%), Positives = 32/89 (35%)
Query: 692 NGELQDQGGNGDVDVPEPSPSSSNTEDANITTTGELSKSIDENPSSKPSEPSESGSPSEP 751
+G +QG G +P P + I TG + D P + EP GSP
Sbjct: 1565 SGSKGEQGAPGLALPGDPGPKGDPGDRGPIGLTGRAGPTGDSGPPGEKGEPGRPGSPGPV 1624
Query: 752 AESGTPSEPAESGTPSEPAESGTPSEPSE 780
G E E G P E G P + E
Sbjct: 1625 GPRGRDGEAGEKGDEGIPGEPGLPGKAGE 1653
>sp|Q01443|SSP2_PLAYO Sporozoite surface protein 2 OS=Plasmodium yoelii yoelii GN=SSP2
PE=1 SV=2
Length = 827
Score = 40.0 bits (92), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 734 NPSSKPSEPSESGSPSEPAESGTPSEPAESGTPSEPAESGTPSEPS---ESVDGNHPSS 789
N S P+EPS PS P E P+EP+ PS P + P+EPS E ++ N PS+
Sbjct: 480 NAPSNPNEPSNPNEPSNPNEPSNPNEPSNPNEPSNPKKPSNPNEPSNPNEPLNPNEPSN 538
Score = 40.0 bits (92), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 29/52 (55%)
Query: 737 SKPSEPSESGSPSEPAESGTPSEPAESGTPSEPAESGTPSEPSESVDGNHPS 788
S P+EPS +PS P E P+EP+ PS P E P+EPS ++P+
Sbjct: 471 SNPNEPSNPNAPSNPNEPSNPNEPSNPNEPSNPNEPSNPNEPSNPKKPSNPN 522
Score = 35.4 bits (80), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 23/41 (56%)
Query: 738 KPSEPSESGSPSEPAESGTPSEPAESGTPSEPAESGTPSEP 778
KPS P+E +P+EP PS P E P+EP+ PS P
Sbjct: 517 KPSNPNEPSNPNEPLNPNEPSNPNEPSNPNEPSNPEEPSNP 557
Score = 35.0 bits (79), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Query: 709 PSPSSSNTEDANITTTGELSKSIDENPSSKPSEPSESGSPSEPAESGTPSEP---AESGT 765
P+ S+ E +N ++ + N S P+EPS PS P E P+EP E
Sbjct: 479 PNAPSNPNEPSNPNEPSNPNEPSNPNEPSNPNEPSNPKKPSNPNEPSNPNEPLNPNEPSN 538
Query: 766 PSEPAESGTPSEPSE 780
P+EP+ PS P E
Sbjct: 539 PNEPSNPNEPSNPEE 553
>sp|Q6H236|PEG3_BOVIN Paternally-expressed gene 3 protein OS=Bos taurus GN=PEG3 PE=2 SV=1
Length = 2387
Score = 39.7 bits (91), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 57/121 (47%), Gaps = 7/121 (5%)
Query: 682 SSADEPVSIPNGELQDQGGNGDVDVPEPSPSSSNTEDANITTTGELSK-SIDENPS--SK 738
S A+EP E Q + EP+ +S E A T E ++ S E P+ S
Sbjct: 1446 SYAEEPAQTSYAEEPAQTSYAE----EPAQTSYTQEPAQTNYTEEPAEASYTEEPAQTSY 1501
Query: 739 PSEPSESGSPSEPAESGTPSEPAESGTPSEPAESGTPSEPSESVDGNHPSSDPAATEVVK 798
EP+++ P EPA++ EPA++ EPA++ P EP+++ P+ A E +
Sbjct: 1502 AEEPAQTSYPEEPAQTSYAEEPAQTSYAEEPAQTSYPEEPAQTSYTEEPAQTSYAKEPAQ 1561
Query: 799 T 799
T
Sbjct: 1562 T 1562
Score = 37.7 bits (86), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 708 EPSPSSSNTEDANITTTGELSK-SIDENPS--SKPSEPSESGSPSEPAESGTPSEPAESG 764
EP+ +S E A + E ++ S E P+ S P EP+++ EPA++ EPA++
Sbjct: 1504 EPAQTSYPEEPAQTSYAEEPAQTSYAEEPAQTSYPEEPAQTSYTEEPAQTSYAKEPAQTS 1563
Query: 765 TPSEPAESGTPSEPSESVDGNHPSSDPAATEVVKT 799
P EPA++ EP+++ P+ A E +T
Sbjct: 1564 YPEEPAQTSYAEEPAQTSYAEEPAQTSYAEEPAQT 1598
Score = 37.4 bits (85), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 708 EPSPSSSNTEDANITTTGELSK-SIDENPS--SKPSEPSESGSPSEPAESGTPSEPAESG 764
EP+ +S E A + E ++ S E P+ S EP+++ P EPA++ EPA++
Sbjct: 1495 EPAQTSYAEEPAQTSYPEEPAQTSYAEEPAQTSYAEEPAQTSYPEEPAQTSYTEEPAQTS 1554
Query: 765 TPSEPAESGTPSEPSESVDGNHPSSDPAATEVVKT 799
EPA++ P EP+++ P+ A E +T
Sbjct: 1555 YAKEPAQTSYPEEPAQTSYAEEPAQTSYAEEPAQT 1589
Score = 35.8 bits (81), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 52/109 (47%), Gaps = 8/109 (7%)
Query: 708 EPSPSSSNTEDANITTT---GELSKSIDENPSSKPSEPSESGSPSEPAESGTPSEPAESG 764
EPS +S E A + T E S + + +S EP+++ EPA++ EPA++
Sbjct: 1108 EPSQTSCIEEPAQTSYTDPAAETSYTEEPAQTSYTQEPAQTSCTEEPAQTSCTEEPAQTS 1167
Query: 765 TPSEPAESGTPSEPSESVDGNHPSS-----DPAATEVVKTVAKAEGTPE 808
EPA++ EP+E+ P+ +PA T K AKA T E
Sbjct: 1168 YTQEPAQTSYTKEPAEASYTEEPAQTSCIEEPAQTNYTKESAKASYTEE 1216
>sp|P23253|TCNA_TRYCR Sialidase OS=Trypanosoma cruzi GN=TCNA PE=2 SV=1
Length = 1162
Score = 38.9 bits (89), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 49/88 (55%), Gaps = 13/88 (14%)
Query: 725 GELSKSIDENPSSKPSEPSESG---SPSEPAES---GTPSEPAES---GTPSEPAES--- 772
G S D + S PS P +S +PS PA+S GTPS PA+S TPS PA+S
Sbjct: 1042 GTPSTPADSSAHSTPSTPVDSSAHSTPSTPADSSAHGTPSTPADSSAHSTPSTPADSSAH 1101
Query: 773 GTPSEPSESVDGNHPSSDPAATEVVKTV 800
GTPS P++S + PS+ PA + TV
Sbjct: 1102 GTPSTPADSSAHSTPST-PAGSSANGTV 1128
Score = 38.1 bits (87), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 52/97 (53%), Gaps = 20/97 (20%)
Query: 728 SKSIDENPSSKPSEPSES---GSPSEPAES---GTPSEPAES---GTPSEPAES---GTP 775
S +D + S PS P++S G+PS PA+S TPS P +S TPS PA+S GTP
Sbjct: 1021 STPVDSSAHSTPSTPADSSAHGTPSTPADSSAHSTPSTPVDSSAHSTPSTPADSSAHGTP 1080
Query: 776 SEPSESVDGNHPSSDPAATEVVKTVAKAEGTPEVTKD 812
S P++S + PS+ PA + A GTP D
Sbjct: 1081 STPADSSAHSTPST-PADSS-------AHGTPSTPAD 1109
Score = 36.6 bits (83), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 45/94 (47%), Gaps = 14/94 (14%)
Query: 728 SKSIDENPSSKPSEPSES---GSPSEPAES---GTPSEPAES---GTPSEPAESGTPSEP 778
S +D + PS P++S G+PS P +S GTPS PA+S TPS PA+S S P
Sbjct: 685 STPVDSSAHGAPSTPADSSAHGTPSTPVDSSAHGTPSTPADSSAHSTPSTPADSSAHSTP 744
Query: 779 SESVDGNHPSSDPAATEVVKTVAKAEGTPEVTKD 812
S D S +T + A GTP D
Sbjct: 745 STPAD-----SSAHSTPSTPVDSSAHGTPSTPAD 773
Score = 35.8 bits (81), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 45/94 (47%), Gaps = 14/94 (14%)
Query: 728 SKSIDENPSSKPSEPSESG---SPSEPAES---GTPSEPAES---GTPSEPAESGTPSEP 778
S D + S PS P++S +PS P +S TPS PA+S GTPS PA+S S P
Sbjct: 997 STPADSSAHSTPSTPADSSAHSTPSTPVDSSAHSTPSTPADSSAHGTPSTPADSSAHSTP 1056
Query: 779 SESVDGNHPSSDPAATEVVKTVAKAEGTPEVTKD 812
S VD S +T + A GTP D
Sbjct: 1057 STPVD-----SSAHSTPSTPADSSAHGTPSTPAD 1085
Score = 34.3 bits (77), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 36/68 (52%), Gaps = 9/68 (13%)
Query: 725 GELSKSIDENPSSKPSEPSES---GSPSEPAES---GTPSEPAES---GTPSEPAESGTP 775
G S D + S PS P++S G+PS P +S TPS P +S GTPS P +S
Sbjct: 766 GTPSTPADSSAHSTPSTPADSSAHGTPSTPVDSSAHSTPSTPVDSSAHGTPSTPVDSSAH 825
Query: 776 SEPSESVD 783
S PS VD
Sbjct: 826 STPSTPVD 833
Score = 33.9 bits (76), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 51/101 (50%), Gaps = 16/101 (15%)
Query: 728 SKSIDENPSSKPSEPSESG---SPSEPAES---GTPSEPAES---GTPSEPAES---GTP 775
S +D + PS P +S +PS PA+S TPS PA+S GTPS P +S TP
Sbjct: 829 STPVDSSAHGTPSTPVDSSAHSTPSTPADSSAHSTPSTPADSSAHGTPSTPVDSSAHSTP 888
Query: 776 SEPSESVDGNHPSS--DPAATEVVKTVA--KAEGTPEVTKD 812
S P++S + PS+ D +A T A A GTP D
Sbjct: 889 STPADSSAHSTPSTPVDSSAHSTPSTPADSSAHGTPSTPVD 929
Score = 33.1 bits (74), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 31/53 (58%), Gaps = 6/53 (11%)
Query: 737 SKPSEPSESGSPSEPAES---GTPSEPAES---GTPSEPAESGTPSEPSESVD 783
S P + S G+PS PA+S TPS PA+S TPS PA+S S PS VD
Sbjct: 925 STPVDSSAHGTPSTPADSSAHSTPSTPADSSAHSTPSTPADSSAHSTPSTPVD 977
Score = 33.1 bits (74), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 51/101 (50%), Gaps = 16/101 (15%)
Query: 728 SKSIDENPSSKPSEPSESG---SPSEPAES---GTPSEPAES---GTPSEPAES---GTP 775
S D + S PS P++S +PS P +S TPS PA+S TPS PA+S TP
Sbjct: 949 STPADSSAHSTPSTPADSSAHSTPSTPVDSSAHSTPSTPADSSAHSTPSTPADSSAHSTP 1008
Query: 776 SEPSESVDGNHPSS--DPAATEVVKTVA--KAEGTPEVTKD 812
S P++S + PS+ D +A T A A GTP D
Sbjct: 1009 STPADSSAHSTPSTPVDSSAHSTPSTPADSSAHGTPSTPAD 1049
>sp|Q06852|SLAP1_CLOTH Cell surface glycoprotein 1 OS=Clostridium thermocellum (strain ATCC
27405 / DSM 1237) GN=olpB PE=4 SV=2
Length = 2313
Score = 37.4 bits (85), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 63/132 (47%), Gaps = 15/132 (11%)
Query: 678 SSNPSSADEPVS-------IPNGELQDQGGNGDVDVP--EPSPSSSNTEDANITTTGELS 728
S P+ +DEP IP D+ D P EP+PS T T + E +
Sbjct: 1587 SDEPTPSDEPTPSETPEEPIPTDTPSDEPTPSDEPTPSDEPTPSDEPTPSDEPTPSDEPT 1646
Query: 729 KSIDENPSSKPSEPSESGSPSE---PAESGTPS-EPAESGTPSEPAESGTPSE-PSESVD 783
S + PS P EP + +PS+ P++ TPS EP S P+ P++ TPSE P E +
Sbjct: 1647 PSDEPTPSETPEEPIPTDTPSDEPTPSDEPTPSDEPTPSDEPT-PSDEPTPSETPEEPIP 1705
Query: 784 GNHPSSDPAATE 795
+ PS +P ++
Sbjct: 1706 TDTPSDEPTPSD 1717
Score = 35.8 bits (81), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 61/123 (49%), Gaps = 9/123 (7%)
Query: 678 SSNPSSADEPVSIPNGELQDQGGNGDVDVPEPSPSSSNTEDANITTTGELSKSIDENPSS 737
S P+ +DEP E ++ D EP+PS T T + E + S + PS
Sbjct: 1403 SDEPTPSDEPTP---SETPEEPIPTDTPSDEPTPSDEPTPSDEPTPSDEPTPSDEPTPSE 1459
Query: 738 KPSEPSESGSPSE---PAESGTPS-EPAESGTPSEPAESGTPSE-PSESVDGNHPSSDPA 792
P EP + +PS+ P++ TPS EP S P+ P++ TPSE P E + + PS +P
Sbjct: 1460 TPEEPIPTDTPSDEPTPSDEPTPSDEPTPSDEPT-PSDEPTPSETPEEPIPTDTPSDEPT 1518
Query: 793 ATE 795
++
Sbjct: 1519 PSD 1521
Score = 35.8 bits (81), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 61/123 (49%), Gaps = 9/123 (7%)
Query: 678 SSNPSSADEPVSIPNGELQDQGGNGDVDVPEPSPSSSNTEDANITTTGELSKSIDENPSS 737
S P+ +DEP E ++ D EP+PS T T + E + S + PS
Sbjct: 1446 SDEPTPSDEPTP---SETPEEPIPTDTPSDEPTPSDEPTPSDEPTPSDEPTPSDEPTPSE 1502
Query: 738 KPSEPSESGSPSE---PAESGTPS-EPAESGTPSEPAESGTPSE-PSESVDGNHPSSDPA 792
P EP + +PS+ P++ TPS EP S P+ P++ TPSE P E + + PS +P
Sbjct: 1503 TPEEPIPTDTPSDEPTPSDEPTPSDEPTPSDEPT-PSDEPTPSETPEEPIPTDTPSDEPT 1561
Query: 793 ATE 795
++
Sbjct: 1562 PSD 1564
Score = 35.8 bits (81), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 61/123 (49%), Gaps = 9/123 (7%)
Query: 678 SSNPSSADEPVSIPNGELQDQGGNGDVDVPEPSPSSSNTEDANITTTGELSKSIDENPSS 737
S P+ +DEP E ++ D EP+PS T T + E + S + PS
Sbjct: 1642 SDEPTPSDEPTP---SETPEEPIPTDTPSDEPTPSDEPTPSDEPTPSDEPTPSDEPTPSE 1698
Query: 738 KPSEPSESGSPSE---PAESGTPS-EPAESGTPSEPAESGTPSE-PSESVDGNHPSSDPA 792
P EP + +PS+ P++ TPS EP S P+ P++ TPSE P E + + PS +P
Sbjct: 1699 TPEEPIPTDTPSDEPTPSDEPTPSDEPTPSDEPT-PSDEPTPSETPEEPIPTDTPSDEPT 1757
Query: 793 ATE 795
++
Sbjct: 1758 PSD 1760
Score = 35.8 bits (81), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 61/123 (49%), Gaps = 9/123 (7%)
Query: 678 SSNPSSADEPVSIPNGELQDQGGNGDVDVPEPSPSSSNTEDANITTTGELSKSIDENPSS 737
S P+ +DEP E ++ D EP+PS T T + E + S + PS
Sbjct: 1685 SDEPTPSDEPTP---SETPEEPIPTDTPSDEPTPSDEPTPSDEPTPSDEPTPSDEPTPSE 1741
Query: 738 KPSEPSESGSPSE---PAESGTPS-EPAESGTPSEPAESGTPSE-PSESVDGNHPSSDPA 792
P EP + +PS+ P++ TPS EP S P+ P++ TPSE P E + + PS +P
Sbjct: 1742 TPEEPIPTDTPSDEPTPSDEPTPSDEPTPSDEPT-PSDEPTPSETPEEPIPTDTPSDEPT 1800
Query: 793 ATE 795
++
Sbjct: 1801 PSD 1803
Score = 35.8 bits (81), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 61/123 (49%), Gaps = 9/123 (7%)
Query: 678 SSNPSSADEPVSIPNGELQDQGGNGDVDVPEPSPSSSNTEDANITTTGELSKSIDENPSS 737
S P+ +DEP E ++ D EP+PS T T + E + S + PS
Sbjct: 1728 SDEPTPSDEPTP---SETPEEPIPTDTPSDEPTPSDEPTPSDEPTPSDEPTPSDEPTPSE 1784
Query: 738 KPSEPSESGSPSE---PAESGTPS-EPAESGTPSEPAESGTPSE-PSESVDGNHPSSDPA 792
P EP + +PS+ P++ TPS EP S P+ P++ TPSE P E + + PS +P
Sbjct: 1785 TPEEPIPTDTPSDEPTPSDEPTPSDEPTPSDEPT-PSDEPTPSETPEEPIPTDTPSDEPT 1843
Query: 793 ATE 795
++
Sbjct: 1844 PSD 1846
Score = 35.8 bits (81), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 61/123 (49%), Gaps = 9/123 (7%)
Query: 678 SSNPSSADEPVSIPNGELQDQGGNGDVDVPEPSPSSSNTEDANITTTGELSKSIDENPSS 737
S P+ +DEP E ++ D EP+PS T T + E + S + PS
Sbjct: 1771 SDEPTPSDEPTP---SETPEEPIPTDTPSDEPTPSDEPTPSDEPTPSDEPTPSDEPTPSE 1827
Query: 738 KPSEPSESGSPSE---PAESGTPS-EPAESGTPSEPAESGTPSE-PSESVDGNHPSSDPA 792
P EP + +PS+ P++ TPS EP S P+ P++ TPSE P E + + PS +P
Sbjct: 1828 TPEEPIPTDTPSDEPTPSDEPTPSDEPTPSDEPT-PSDEPTPSETPEEPIPTDTPSDEPT 1886
Query: 793 ATE 795
++
Sbjct: 1887 PSD 1889
Score = 35.8 bits (81), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 61/123 (49%), Gaps = 9/123 (7%)
Query: 678 SSNPSSADEPVSIPNGELQDQGGNGDVDVPEPSPSSSNTEDANITTTGELSKSIDENPSS 737
S P+ +DEP E ++ D EP+PS T T + E + S + PS
Sbjct: 1814 SDEPTPSDEPTP---SETPEEPIPTDTPSDEPTPSDEPTPSDEPTPSDEPTPSDEPTPSE 1870
Query: 738 KPSEPSESGSPSE---PAESGTPS-EPAESGTPSEPAESGTPSE-PSESVDGNHPSSDPA 792
P EP + +PS+ P++ TPS EP S P+ P++ TPSE P E + + PS +P
Sbjct: 1871 TPEEPIPTDTPSDEPTPSDEPTPSDEPTPSDEPT-PSDEPTPSETPEEPIPTDTPSDEPT 1929
Query: 793 ATE 795
++
Sbjct: 1930 PSD 1932
Score = 34.7 bits (78), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 6/93 (6%)
Query: 708 EPSPSSSNTEDANITTTGELSKSIDENPSSKPSEPSESGSPSE---PAESGTPS-EPAES 763
EP+PS T T + E + S + PS P EP + +PS+ P++ TPS EP S
Sbjct: 1387 EPTPSDEPTPSDEPTPSDEPTPSDEPTPSETPEEPIPTDTPSDEPTPSDEPTPSDEPTPS 1446
Query: 764 GTPSEPAESGTPSE-PSESVDGNHPSSDPAATE 795
P+ P++ TPSE P E + + PS +P ++
Sbjct: 1447 DEPT-PSDEPTPSETPEEPIPTDTPSDEPTPSD 1478
Score = 33.1 bits (74), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 60/125 (48%), Gaps = 14/125 (11%)
Query: 678 SSNPSSADEPVSIPNGELQDQGGNGDVDVPEPSPSSSNTEDANITT---TGELSKSIDEN 734
S P+ +DEP D+ D P P+ S T + I T + E + S +
Sbjct: 1514 SDEPTPSDEPTP------SDEPTPSDEPTPSDEPTPSETPEEPIPTDTPSDEPTPSDEPT 1567
Query: 735 PSSKPSEPSESGSPSE---PAESGTPS-EPAESGTPSEPAESGTPSEPSESVDGNHPSSD 790
PS +P+ PS+ +PS+ P++ TPS EP S TP EP + TPS+ D PS +
Sbjct: 1568 PSDEPT-PSDEPTPSDEPTPSDEPTPSDEPTPSETPEEPIPTDTPSDEPTPSDEPTPSDE 1626
Query: 791 PAATE 795
P ++
Sbjct: 1627 PTPSD 1631
Score = 33.1 bits (74), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 60/125 (48%), Gaps = 14/125 (11%)
Query: 678 SSNPSSADEPVSIPNGELQDQGGNGDVDVPEPSPSSSNTEDANITT---TGELSKSIDEN 734
S P+ +DEP D+ D P P+ S T + I T + E + S +
Sbjct: 1882 SDEPTPSDEPTP------SDEPTPSDEPTPSDEPTPSETPEEPIPTDTPSDEPTPSDEPT 1935
Query: 735 PSSKPSEPSESGSPSE---PAESGTPS-EPAESGTPSEPAESGTPSEPSESVDGNHPSSD 790
PS +P+ PS+ +PS+ P++ TPS EP S TP EP + TPS+ D PS +
Sbjct: 1936 PSDEPT-PSDEPTPSDEPTPSDEPTPSDEPTPSETPEEPIPTDTPSDEPTPSDEPTPSDE 1994
Query: 791 PAATE 795
P ++
Sbjct: 1995 PTPSD 1999
>sp|P21979|SPAA_STRDO Cell surface antigen I/II OS=Streptococcus downei GN=spaA PE=3 SV=2
Length = 1528
Score = 36.6 bits (83), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 71/180 (39%), Gaps = 22/180 (12%)
Query: 612 GVTNGGGHDQVTVGEDDLDDTATSAAVPVSKSEDSDVGKLPN---------DSVETGSCT 662
V G ++ +T+G + + A +P +D+ GK PN +V T
Sbjct: 785 AVRMSGPNNYITLGATSATNVLSLAEMPQVPGKDNTAGKKPNIWYSLNGKIRAVNVPKVT 844
Query: 663 TEKPPTWVEWRERPDSSNPSSADEPVSIPNGELQDQGGNGDVDVPEPSPSSSNTEDANIT 722
EKP VE P+ DEP EL D + PEP+P S N + +
Sbjct: 845 KEKPTPPVE---------PTKPDEPTYEVEKELVDLPVEPKYE-PEPTPPSKNPDQSIPE 894
Query: 723 TTGELSKSIDENPSSKPSEPSESGSPSEPAESGTPSEPAESGTPSEPAESGTPSEPSESV 782
E + +++ P EPS P+ P + EP + P EP+ P+ P E V
Sbjct: 895 KPVEPTYEVEKELEPAPVEPSYEKEPTPPQSTPDQEEPEK---PVEPSYQSLPTPPVEPV 951
>sp|Q5R1T0|CAF1A_CHICK Chromatin assembly factor 1 subunit A OS=Gallus gallus GN=CHAF1A
PE=1 SV=1
Length = 937
Score = 34.3 bits (77), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 58/133 (43%), Gaps = 6/133 (4%)
Query: 537 DDVDEAQGSLERDDEDVYFDDESAEVVISSLRLGDDQESGSLFTNSNWFAFEDDRVSHER 596
D VDE+ L D + V FD +++ +++ LG D S NS + DD + +
Sbjct: 112 DSVDESNQRLSDDVDHVSFDSKASSAALTNGMLGKDMNKLSCL-NSTQNSQTDDSMQTDV 170
Query: 597 AAGSLASPSPNIEE-----TGVTNGGGHDQVTVGEDDLDDTATSAAVPVSKSEDSDVGKL 651
++A+ ++ + +G+T + V + +L D +PV ED K
Sbjct: 171 PCEAIANKGEDLVDGIQSCSGLTERNNLENTKVNQSELKDVIFEGKMPVVLLEDIMAAKS 230
Query: 652 PNDSVETGSCTTE 664
P + GS T+E
Sbjct: 231 PQVTSLDGSVTSE 243
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.131 0.374
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 327,006,507
Number of Sequences: 539616
Number of extensions: 15398220
Number of successful extensions: 82810
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 371
Number of HSP's successfully gapped in prelim test: 1603
Number of HSP's that attempted gapping in prelim test: 56845
Number of HSP's gapped (non-prelim): 18154
length of query: 822
length of database: 191,569,459
effective HSP length: 126
effective length of query: 696
effective length of database: 123,577,843
effective search space: 86010178728
effective search space used: 86010178728
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 66 (30.0 bits)