Your job contains 1 sequence.
>003409
MAQPLVKKDDDRDDEAEYSPFLGIEKGAVLQEARVFNDPQLDPRRCSQVITKLLYLLNQG
ETFTKIEATEVFFAVTKLFQSRDIGLRRMVYLMIKELSPSADEVIIVTSSLMKDMTSKTD
MYRANAIRVLCRITDGTLLTQIERYLKQAIVDKNPVVASAALVSGIHLLQTTPEIVKRWS
NEVQEAVQSRAALVQFHALALLHQIRQNDRLAVSKLVTSLTRGTVRSPLAQCLLIRYTTQ
VIREAATTQTGDRPFYDFLESCLRHKAEMVIFEAARAITELNGVTNRELTPAITVLQLFL
SSSKPVLRFAAVRTLNKSLISDQNRSIATLAITTLLKTGNESSVDRLMKQITNFMSDIAD
EFKIVVVEAIRSLCLKFPLKYRSLMNFLSNILREEGGFEYKKAIVDSIVILIRDIPDAKE
NGLLHLCEFIEDCEFTYLSTQILHFLGTEGPKTSDPSKYIRYIYNRVHLENATVRAAAVS
TLAKFGAMVDALKPRVFVLLRRCLYDGDDEEPAEQPFDINSVPKEVKTQPLAEKKAPGKM
PAGLGAPPSGPPSTVDAYEKLLSSIPEFSDFGKLFKSSAPVELTEAETEYAVNVVKHIFD
RHVVFQYNCTNTIPEQLLENVTVIVDASEAEEFAEVASKPLRSLPYDSPGQIFGAFEKPE
GVPAVGKFSNMLRFIVKEVDPTTGDVEDDGVEDEYQLEDLEVVAADYVMKVGVSNFRNAW
ESIGPDFERVDEYGLGPRESLAEAVSAVISLLGMQPCEGTEVVANNSRSHTCLLSGVFIG
NVKVLVRLQFGIDGPKEVAMKLAVRSEDDNVSDMIHEIVASG
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 003409
(822 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2139479 - symbol:AT4G34450 species:3702 "Arabi... 1411 0. 3
UNIPROTKB|E1C7T8 - symbol:COPG2 "Coatomer subunit gamma" ... 1508 1.2e-212 2
ZFIN|ZDB-GENE-000208-8 - symbol:copg2 "coatomer protein c... 1491 2.5e-210 2
UNIPROTKB|A2VE21 - symbol:COPG2 "Coatomer subunit gamma-2... 1477 2.2e-209 2
UNIPROTKB|Q9UBF2 - symbol:COPG2 "Coatomer subunit gamma-2... 1489 2.9e-209 2
MGI|MGI:1858683 - symbol:Copg2 "coatomer protein complex,... 1491 4.2e-208 2
UNIPROTKB|F1SNE9 - symbol:COPG2 "Coatomer subunit gamma" ... 1470 1.1e-207 2
UNIPROTKB|E2RPG9 - symbol:COPG1 "Coatomer subunit gamma" ... 1484 1.4e-207 2
UNIPROTKB|Q9Y678 - symbol:COPG1 "Coatomer subunit gamma-1... 1485 2.9e-207 2
UNIPROTKB|P53620 - symbol:COPG1 "Coatomer subunit gamma-1... 1486 6.1e-207 2
UNIPROTKB|F1NB52 - symbol:COPG "Coatomer subunit gamma" s... 1497 2.6e-206 2
MGI|MGI:1858696 - symbol:Copg1 "coatomer protein complex,... 1480 5.4e-206 2
RGD|1565292 - symbol:Copg1 "coatomer protein complex, sub... 1480 5.4e-206 2
UNIPROTKB|Q4AEF8 - symbol:Copg1 "Coatomer subunit gamma-1... 1480 5.4e-206 2
UNIPROTKB|F1PHS7 - symbol:COPG2 "Coatomer subunit gamma" ... 1478 3.8e-205 2
DICTYBASE|DDB_G0289371 - symbol:copG "adaptin N-terminal ... 1437 1.5e-196 3
FB|FBgn0028968 - symbol:gammaCop "gamma-coatomer protein"... 880 2.0e-188 3
WB|WBGene00011775 - symbol:T14G10.5 species:6239 "Caenorh... 1384 2.3e-181 2
ASPGD|ASPL0000072207 - symbol:AN4547 species:162425 "Emer... 690 3.7e-158 3
RGD|1566215 - symbol:Copg2 "coatomer protein complex, sub... 1367 1.0e-139 1
POMBASE|SPAC57A7.10c - symbol:sec21 "coatomer gamma subun... 636 5.4e-139 3
GENEDB_PFALCIPARUM|PF11_0463 - symbol:PF11_0463 "coat pro... 589 7.7e-125 5
UNIPROTKB|Q8IHR6 - symbol:PF11_0463 "Coatomer subunit gam... 589 7.7e-125 5
CGD|CAL0001871 - symbol:orf19.759 species:5476 "Candida a... 477 4.1e-121 4
UNIPROTKB|D4A113 - symbol:D4A113 "Uncharacterized protein... 998 1.3e-100 1
SGD|S000005231 - symbol:SEC21 "Gamma subunit of coatomer"... 457 8.3e-97 3
UNIPROTKB|F1SPF9 - symbol:COPG1 "Uncharacterized protein"... 545 6.0e-93 2
UNIPROTKB|F6X838 - symbol:COPG2 "Coatomer subunit gamma-2... 691 4.4e-68 1
UNIPROTKB|H0Y8X7 - symbol:COPG1 "Coatomer subunit gamma-1... 306 3.0e-26 1
UNIPROTKB|H7C1T7 - symbol:COPG2 "Coatomer subunit gamma-2... 277 3.9e-23 1
GENEDB_PFALCIPARUM|PFE1400c - symbol:PFE1400c "beta adapt... 132 1.5e-08 2
UNIPROTKB|Q8I3I6 - symbol:PFE1400c "Beta adaptin protein,... 132 1.5e-08 2
UNIPROTKB|G3X7G4 - symbol:AP2B1 "AP-2 complex subunit bet... 131 1.6e-07 2
DICTYBASE|DDB_G0279141 - symbol:ap1b1 "beta adaptin" spec... 127 3.4e-07 2
UNIPROTKB|P63009 - symbol:AP2B1 "AP-2 complex subunit bet... 131 5.2e-07 2
UNIPROTKB|Q08DS7 - symbol:AP2B1 "AP-1 complex subunit bet... 131 5.4e-07 2
UNIPROTKB|F1S182 - symbol:LOC100517121 "Uncharacterized p... 129 6.1e-07 2
UNIPROTKB|P63010 - symbol:AP2B1 "AP-2 complex subunit bet... 130 6.6e-07 2
MGI|MGI:1919020 - symbol:Ap2b1 "adaptor-related protein c... 130 6.6e-07 2
RGD|71048 - symbol:Ap2b1 "adaptor-related protein complex... 130 6.6e-07 2
UNIPROTKB|E1BXC1 - symbol:AP2B1 "Uncharacterized protein"... 130 6.6e-07 2
FB|FBgn0010380 - symbol:AP-1-2beta "Adaptor Protein compl... 122 6.8e-07 2
UNIPROTKB|E2RIV1 - symbol:AP2B1 "Uncharacterized protein"... 130 6.8e-07 2
UNIPROTKB|E1BY12 - symbol:AP2B1 "Uncharacterized protein"... 130 6.9e-07 2
WB|WBGene00000160 - symbol:apb-1 species:6239 "Caenorhabd... 120 7.5e-07 2
ZFIN|ZDB-GENE-030131-6564 - symbol:ap2b1 "adaptor-related... 131 1.4e-06 2
UNIPROTKB|I3L6Y6 - symbol:AP2B1 "Uncharacterized protein"... 123 3.7e-06 2
MGI|MGI:1337130 - symbol:Ap4b1 "adaptor-related protein c... 133 3.8e-06 2
TAIR|locus:2117924 - symbol:AT4G23460 species:3702 "Arabi... 143 6.3e-06 1
ZFIN|ZDB-GENE-040426-1284 - symbol:ap4b1 "adaptor-related... 136 3.0e-05 2
UNIPROTKB|B1ALD2 - symbol:AP4B1 "AP-4 complex subunit bet... 128 3.2e-05 1
RGD|2064 - symbol:Ap1b1 "adaptor-related protein complex ... 109 3.5e-05 2
UNIPROTKB|P52303 - symbol:Ap1b1 "AP-1 complex subunit bet... 109 3.5e-05 2
UNIPROTKB|Q7Z451 - symbol:AP2B1 "AP-2 complex subunit bet... 113 3.6e-05 2
UNIPROTKB|E2RRJ6 - symbol:AP1B1 "Uncharacterized protein"... 135 4.9e-05 1
UNIPROTKB|F1MIF2 - symbol:AP1B1 "Uncharacterized protein"... 135 5.0e-05 1
UNIPROTKB|F1RFI2 - symbol:AP1B1 "Uncharacterized protein"... 135 5.0e-05 1
UNIPROTKB|I3LV02 - symbol:AP1B1 "Uncharacterized protein"... 135 5.0e-05 1
RGD|1310529 - symbol:Ap4b1 "adaptor-related protein compl... 133 5.9e-05 1
ZFIN|ZDB-GENE-061025-1 - symbol:ap1b1 "adaptor-related pr... 134 6.3e-05 1
UNIPROTKB|F1SBR2 - symbol:AP4B1 "Uncharacterized protein"... 131 9.7e-05 1
UNIPROTKB|C9J1E7 - symbol:AP1B1 "AP-1 complex subunit bet... 129 0.00011 1
GENEDB_PFALCIPARUM|MAL7P1.164 - symbol:MAL7P1.164 "adapte... 126 0.00020 2
UNIPROTKB|Q8IBF8 - symbol:MAL7P1.164 "Adapter-related pro... 126 0.00020 2
UNIPROTKB|Q9Y6B7 - symbol:AP4B1 "AP-4 complex subunit bet... 128 0.00021 1
UNIPROTKB|F1PTH0 - symbol:AP4B1 "Uncharacterized protein"... 129 0.00021 1
UNIPROTKB|G4N974 - symbol:MGG_03320 "AP-1 complex subunit... 104 0.00021 2
MGI|MGI:1096368 - symbol:Ap1b1 "adaptor protein complex A... 127 0.00036 1
ASPGD|ASPL0000034670 - symbol:AN3029 species:162425 "Emer... 104 0.00037 2
>TAIR|locus:2139479 [details] [associations]
symbol:AT4G34450 species:3702 "Arabidopsis thaliana"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005798 "Golgi-associated
vesicle" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030126
"COPI vesicle coat" evidence=IEA] [GO:0030276 "clathrin binding"
evidence=ISS] [GO:0016020 "membrane" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006487 "protein N-linked
glycosylation" evidence=RCA] [GO:0007010 "cytoskeleton
organization" evidence=RCA] [GO:0010498 "proteasomal protein
catabolic process" evidence=RCA] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR002553 InterPro:IPR009028
InterPro:IPR013040 InterPro:IPR014863 InterPro:IPR015873
InterPro:IPR016024 Pfam:PF01602 Pfam:PF08752 InterPro:IPR013041
GO:GO:0005829 GO:GO:0005886 GO:GO:0009506 GO:GO:0009507
GO:GO:0006886 EMBL:CP002687 GenomeReviews:CT486007_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0016192 GO:GO:0005198 EMBL:AL161585
SUPFAM:SSF55711 SUPFAM:SSF49348 Gene3D:3.30.310.30 GO:GO:0030126
EMBL:AL023094 eggNOG:COG5240 HOGENOM:HOG000184434
Gene3D:2.60.40.1480 InterPro:IPR017106 PANTHER:PTHR10261
PIRSF:PIRSF037093 EMBL:AK221839 EMBL:AK226533 IPI:IPI00537691
PIR:T05265 RefSeq:NP_195171.2 UniGene:At.25572
ProteinModelPortal:Q0WW26 SMR:Q0WW26 IntAct:Q0WW26 STRING:Q0WW26
PaxDb:Q0WW26 PRIDE:Q0WW26 ProMEX:Q0WW26 EnsemblPlants:AT4G34450.1
GeneID:829596 KEGG:ath:AT4G34450 TAIR:At4g34450 InParanoid:Q0WW26
OMA:DESIFAN PhylomeDB:Q0WW26 ProtClustDB:CLSN2681006
Genevestigator:Q0WW26 Uniprot:Q0WW26
Length = 886
Score = 1411 (501.8 bits), Expect = 0., Sum P(3) = 0.
Identities = 281/318 (88%), Positives = 303/318 (95%)
Query: 1 MAQPLVKKDDDRDDEAEYSPFLGIEKGAVLQEARVFNDPQLDPRRCSQVITKLLYLLNQG 60
MAQPLVKKDDD DDE EYSPF+GIEKGAVLQEARVFNDPQ+DPRRCSQVITKLLYLLNQG
Sbjct: 1 MAQPLVKKDDDHDDELEYSPFMGIEKGAVLQEARVFNDPQVDPRRCSQVITKLLYLLNQG 60
Query: 61 ETFTKIEATEVFFAVTKLFQSRDIGLRRMVYLMIKELSPSADEVIIVTSSLMKDMTSKTD 120
E+FTK+EATEVFF+VTKLFQS+D GLRRMVYL+IKELSPS+DEVIIVTSSLMKDM SK D
Sbjct: 61 ESFTKVEATEVFFSVTKLFQSKDTGLRRMVYLIIKELSPSSDEVIIVTSSLMKDMNSKID 120
Query: 121 MYRANAIRVLCRITDGTLLTQIERYLKQAIVDKNPVVASAALVSGIHLLQTTPEIVKRWS 180
MYRANAIRVLCRI DGTLLTQIERYLKQAIVDKNPVV+SAALVSG+HLL+T PEIVKRWS
Sbjct: 121 MYRANAIRVLCRIIDGTLLTQIERYLKQAIVDKNPVVSSAALVSGLHLLKTNPEIVKRWS 180
Query: 181 NEVQEAVQSRAALVQFHALALLHQIRQNDRLAVSKLVTSLTRGTVRSPLAQCLLIRYTTQ 240
NEVQE +QSR+ALVQFHALALLHQIRQNDRLAVSKLV SLTRG+VRSPLAQCLLIRYT+Q
Sbjct: 181 NEVQEGIQSRSALVQFHALALLHQIRQNDRLAVSKLVGSLTRGSVRSPLAQCLLIRYTSQ 240
Query: 241 VIREAATT-QTGDRPFYDFLESCLRHKAEMVIFEAARAITELNGVTNRELTPAITVLQLF 299
VIR+ A Q+G+RPFY+FLESCLRHKAEMVI EAARAITEL+GVT+RELTPAITVLQLF
Sbjct: 241 VIRDMANHGQSGERPFYEFLESCLRHKAEMVILEAARAITELDGVTSRELTPAITVLQLF 300
Query: 300 LSSSKPVLRFAAVRTLNK 317
LSS +PVLRFAAVRTLNK
Sbjct: 301 LSSPRPVLRFAAVRTLNK 318
Score = 1088 (388.1 bits), Expect = 0., Sum P(3) = 0.
Identities = 217/312 (69%), Positives = 239/312 (76%)
Query: 511 EPAEQPFDINSVPKEVKTQPLAEKKAPGKMXXXXXXXXXXXXXTVDAYEKLLSSIPEFSD 570
EP+E+ FDINSVPKEVK+QPLAEKKA GK D YE+LLSSIPEF+
Sbjct: 575 EPSEEAFDINSVPKEVKSQPLAEKKAQGKKPTGLGAPPAAPASGFDGYERLLSSIPEFAA 634
Query: 571 FGKLFKSSAPVELTEAETEYAVNVVKHIFDRHVVFQYNCTNTIPEQLLENVTVIVDXXXX 630
FGKLFKSS PVELTEAETEYAVNVVKHIFD HVVFQYNCTNTIPEQLLE V VIVD
Sbjct: 635 FGKLFKSSLPVELTEAETEYAVNVVKHIFDSHVVFQYNCTNTIPEQLLERVNVIVDASEA 694
Query: 631 XXXXXXXXKPLRSLPYDSPGQIFGAFEKPEGVPAVGKFSNMLRFIVKEVDPTTXXXXXXX 690
K L SLPYDSPGQ F FEKP GVPAVGKFSN L F+VKEVDP+T
Sbjct: 695 EEFSEVTSKALNSLPYDSPGQAFVVFEKPAGVPAVGKFSNTLTFVVKEVDPSTGEAEDDG 754
Query: 691 XXXXYQLEDLEVVAADYVMKVGVSNFRNAWESIGPDFERVDEYGLGPRESLAEAVSAVIS 750
YQLEDLEVVA DY++KVGVSNFRNAWES+ + ERVDEYGLG RESL EAV AV+
Sbjct: 755 VEDEYQLEDLEVVAGDYMVKVGVSNFRNAWESMDEEDERVDEYGLGQRESLGEAVKAVMD 814
Query: 751 LLGMQPCEGTEVVANNSRSHTCLLSGVFIGNVKVLVRLQFGIDGPKEVAMKLAVRSEDDN 810
LLGMQ CEGTE + N+RSHTCLLSGV+IGNVKVLVR QFG+D K++AMKL VR+ED +
Sbjct: 815 LLGMQTCEGTETIPLNARSHTCLLSGVYIGNVKVLVRAQFGMDSSKDIAMKLTVRAEDVS 874
Query: 811 VSDMIHEIVASG 822
V++ IHEIVASG
Sbjct: 875 VAEAIHEIVASG 886
Score = 851 (304.6 bits), Expect = 0., Sum P(3) = 0.
Identities = 165/194 (85%), Positives = 177/194 (91%)
Query: 317 KSLISDQNRSXXXXXXXXXXKTGNESSVDRLMKQITNFMSDIADEFKIVVVEAIRSLCLK 376
+SLISDQNRS KTGNESSV+RLMKQITNFMSDIADEFKIVVV+AIRSLC+K
Sbjct: 335 ESLISDQNRSIATLAITTLLKTGNESSVERLMKQITNFMSDIADEFKIVVVDAIRSLCVK 394
Query: 377 FPLKYRSLMNFLSNILREEGGFEYKKAIVDSIVILIRDIPDAKENGLLHLCEFIEDCEFT 436
FPLKYRSLM FLSNILREEGGFEYK+AIVDSIV +IRDIPDAKE+GLLHLCEFIEDCEFT
Sbjct: 395 FPLKYRSLMTFLSNILREEGGFEYKRAIVDSIVTIIRDIPDAKESGLLHLCEFIEDCEFT 454
Query: 437 YLSTQILHFLGTEGPKTSDPSKYIRYIYNRVHLENATVRAAAVSTLAKFGAMVDALKPRV 496
YLSTQILHFLG EGP TSDPSKYIRYIYNRVHLENATVRAAAVSTLAKFG MV++LKPR+
Sbjct: 455 YLSTQILHFLGIEGPNTSDPSKYIRYIYNRVHLENATVRAAAVSTLAKFGFMVESLKPRI 514
Query: 497 FVLLRRCLYDGDDE 510
VLL+RC+YD DDE
Sbjct: 515 TVLLKRCIYDSDDE 528
Score = 42 (19.8 bits), Expect = 1.8e-112, Sum P(2) = 1.8e-112
Identities = 12/52 (23%), Positives = 24/52 (46%)
Query: 80 QSRDIGLRRMVYLMIKELSPSADEVIIVTSSLMKDMTSKTDMYRANAIRVLC 131
Q+R I + L+ S + ++ ++ M D+ + + +AIR LC
Sbjct: 341 QNRSIATLAITTLLKTGNESSVERLMKQITNFMSDIADEFKIVVVDAIRSLC 392
Score = 40 (19.1 bits), Expect = 1.2e-114, Sum P(3) = 1.2e-114
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 411 LIRDIPDAKENGLLHLCEFIEDC 433
+IRD+ + ++G EF+E C
Sbjct: 241 VIRDMANHGQSGERPFYEFLESC 263
Score = 37 (18.1 bits), Expect = 1.2e-114, Sum P(3) = 1.2e-114
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 343 SVDRLMKQITNFMSDIADEFKIVVVEAIRSLC 374
S D ++ ++ M D+ + + AIR LC
Sbjct: 100 SSDEVIIVTSSLMKDMNSKIDMYRANAIRVLC 131
>UNIPROTKB|E1C7T8 [details] [associations]
symbol:COPG2 "Coatomer subunit gamma" species:9031 "Gallus
gallus" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] InterPro:IPR002553
InterPro:IPR013040 InterPro:IPR014863 InterPro:IPR015873
InterPro:IPR016024 Pfam:PF01602 Pfam:PF08752 InterPro:IPR013041
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016192 GO:GO:0005198 SUPFAM:SSF49348 Gene3D:3.30.310.30
GO:GO:0030126 GeneTree:ENSGT00390000016313 Gene3D:2.60.40.1480
InterPro:IPR017106 PANTHER:PTHR10261 PIRSF:PIRSF037093 CTD:26958
OMA:SEEGHES EMBL:AADN02039801 IPI:IPI00596855 RefSeq:XP_414981.2
Ensembl:ENSGALT00000013228 GeneID:416685 KEGG:gga:416685
NextBio:20820109 Uniprot:E1C7T8
Length = 871
Score = 1508 (535.9 bits), Expect = 1.2e-212, Sum P(2) = 1.2e-212
Identities = 303/535 (56%), Positives = 396/535 (74%)
Query: 5 LVKKDDDRDDEAEY--SPFLGIEKGAVLQEARVFNDPQLDPRRCSQVITKLLYLLNQGET 62
++KK D +D+E+ +PF +EK AVLQEAR+FN+ ++PRRC ++TK+LYLLNQGE
Sbjct: 1 MIKKFDKKDEESGSGSNPFQNLEKSAVLQEARIFNETPINPRRCLHILTKILYLLNQGEH 60
Query: 63 FTKIEATEVFFAVTKLFQSRDIGLRRMVYLMIKELSPSADEVIIVTSSLMKDMTSKTDMY 122
F EATE FFA+T+LFQS D LRRM YL IKE++ +++VIIVTSSL KDMT K D+Y
Sbjct: 61 FGTTEATEAFFAMTRLFQSNDQTLRRMCYLTIKEMANISEDVIIVTSSLTKDMTGKEDVY 120
Query: 123 RANAIRVLCRITDGTLLTQIERYLKQAIVDKNPVVASAALVSGIHLLQTTPEIVKRWSNE 182
R AIR LCRITDGT+L IERY+KQAIVDK P V+S+ALVS +H+++ + ++VKRW NE
Sbjct: 121 RGPAIRALCRITDGTMLQAIERYMKQAIVDKVPSVSSSALVSSLHMMKISYDVVKRWINE 180
Query: 183 VQEAVQSRAALVQFHALALLHQIRQNDRLAVSKLVTSLTRGTVRSPLAQCLLIRYTTQVI 242
QEA S +VQ+HAL LL+ +R+NDRLAVSK++ T+ ++S A C+LIR ++++
Sbjct: 181 AQEAASSDNIMVQYHALGLLYHLRKNDRLAVSKMLNKFTKSGLKSQFAYCMLIRIASKLL 240
Query: 243 REAATTQTGDRPFYDFLESCLRHKAEMVIFEAARAITELNGVTNRELTPAITVLQLFLSS 302
+E+ + + P +DF+ESCLR+K EMVI+EAA AI L T REL PA++VLQLF SS
Sbjct: 241 KESE--EGHESPLFDFIESCLRNKHEMVIYEAASAIIHLPNCTARELAPAVSVLQLFCSS 298
Query: 303 SKPVLRFAAVRTLNK-----------------SLISDQNRSXXXXXXXXXXKTGNESSVD 345
KPVLR+AAVRTLNK +LI+D NRS KTG+ESSVD
Sbjct: 299 PKPVLRYAAVRTLNKVAMKHPSAVTACNLDLENLITDSNRSIATLAITTLLKTGSESSVD 358
Query: 346 RLMKQITNFMSDIADEFKIVVVEAIRSLCLKFPLKYRSLMNFLSNILREEGGFEYKKAIV 405
RLMKQI++F+S+I+DEFK+VVV+AI +LC K+P K+ +M FLSN+LR++GGFEYK+AIV
Sbjct: 359 RLMKQISSFVSEISDEFKVVVVQAISALCQKYPRKHSVMMTFLSNMLRDDGGFEYKRAIV 418
Query: 406 DSIVILIRDIPDAKENGLLHLCEFIEDCEFTYLSTQILHFLGTEGPKTSDPSKYIRYIYN 465
D I+ +I + P++KE+GL HLCEFIEDCE T L+T+ILH LG EGP+T PSKYIR+I+N
Sbjct: 419 DCIISIIEENPESKESGLAHLCEFIEDCEHTVLATKILHLLGKEGPRTPSPSKYIRFIFN 478
Query: 466 RVHLENATVRAAAVSTLAKFGAMVDALKPRVFVLLRRCLYDGDDEEPAEQPFDIN 520
RV LEN VRAAAVS LAKFGA + L P + VLL+RC+ D DDE F +N
Sbjct: 479 RVVLENEAVRAAAVSALAKFGAQNENLLPSILVLLQRCMMDSDDEVRDRATFYLN 533
Score = 570 (205.7 bits), Expect = 1.2e-212, Sum P(2) = 1.2e-212
Identities = 126/308 (40%), Positives = 181/308 (58%)
Query: 511 EPAEQPFDINSVPKEVKTQPLAEKKAPGKMXXXXXXXXXXXXXTVDAYEKLLSSIPEFSD 570
EP+++PFD+ +VP + T P+ E+KA ++ D +++ L++IPEF
Sbjct: 568 EPSDKPFDMKTVP--LATAPIFEQKA--EISLVTSKPEKVAPSRQDIFQEQLAAIPEFKS 623
Query: 571 FGKLFKSSAPVELTEAETEYAVNVVKHIFDRHVVFQYNCTNTIPEQLLENVTVIVDXXXX 630
G LFKSS PV+LTEAETEY V +KH+F H+VFQ++CTNT+ +QLLE VTV ++
Sbjct: 624 LGPLFKSSEPVQLTEAETEYFVRCIKHVFTNHIVFQFDCTNTLNDQLLERVTVQMEPSDA 683
Query: 631 XXXXXXXXKPLRSLPYDSPGQIFGAFEKPEGVP-AVG-KFSNMLRFIVKEVDPTTXXXXX 688
P SL Y+ PG + + P+ P AV FS ++F V++ DP T
Sbjct: 684 YDVICCIPAP--SLAYNQPGMCYTLVQMPQDDPTAVACTFSCTMKFTVRDCDPNTGVPDE 741
Query: 689 XXXXXXYQLEDLEVVAADYVMKVGVSNFRNAWESIGPDFERVDEYGLGPRESLAEAVSAV 748
Y LEDLEV +D++ KV NF AWE +G DFE+ + + LG ++L EAV+ +
Sbjct: 742 DGYDDEYVLEDLEVTVSDHIQKVLKPNFAAAWEEVGDDFEKEETFALGSIKTLDEAVNNI 801
Query: 749 ISLLGMQPCEGTEVVANNSRSHTCLLSGVFIGNVKVLVRLQFGI-DGPKEVAMKLAVRSE 807
I LGMQPCE ++ V N SHT LSGV+ G VLVR + + DG V M++ VRS+
Sbjct: 802 IKFLGMQPCERSDKVPENKNSHTLYLSGVYRGGCDVLVRSRLALGDG---VTMQVTVRSK 858
Query: 808 DDNVSDMI 815
++ D+I
Sbjct: 859 EEMPVDVI 866
>ZFIN|ZDB-GENE-000208-8 [details] [associations]
symbol:copg2 "coatomer protein complex, subunit gamma
2" species:7955 "Danio rerio" [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0005798
"Golgi-associated vesicle" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] InterPro:IPR002553
InterPro:IPR009028 InterPro:IPR013040 InterPro:IPR014863
InterPro:IPR015873 InterPro:IPR016024 Pfam:PF01602 Pfam:PF08752
InterPro:IPR013041 ZFIN:ZDB-GENE-000208-8 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0016192 GO:GO:0005198 SUPFAM:SSF55711
SUPFAM:SSF49348 Gene3D:3.30.310.30 GO:GO:0030126 eggNOG:COG5240
GeneTree:ENSGT00390000016313 HOGENOM:HOG000184434
HOVERGEN:HBG004368 OrthoDB:EOG4DZ1TM Gene3D:2.60.40.1480
InterPro:IPR017106 PANTHER:PTHR10261 PIRSF:PIRSF037093 CTD:26958
EMBL:AF191561 EMBL:AF191562 EMBL:CR749763 EMBL:BX004864
EMBL:BC045918 EMBL:BC096860 IPI:IPI00495942 IPI:IPI00898490
RefSeq:NP_571069.1 UniGene:Dr.75573 HSSP:Q9Y678
ProteinModelPortal:Q9PUE4 SMR:Q9PUE4 STRING:Q9PUE4 PRIDE:Q9PUE4
Ensembl:ENSDART00000043660 GeneID:30187 KEGG:dre:30187
InParanoid:Q7ZVC5 NextBio:20806653 Bgee:Q9PUE4 Uniprot:Q9PUE4
Length = 873
Score = 1491 (529.9 bits), Expect = 2.5e-210, Sum P(2) = 2.5e-210
Identities = 301/543 (55%), Positives = 398/543 (73%)
Query: 5 LVKKDDDRDDEAEY--SPFLGIEKGAVLQEARVFNDPQLDPRRCSQVITKLLYLLNQGET 62
++KK D +D+E+ +PF +EK AVLQEAR+FN+ ++PRRC ++TK++YLLNQGE
Sbjct: 1 MIKKFDKKDEESGSGSNPFQHLEKSAVLQEARIFNETPINPRRCLHILTKIIYLLNQGEH 60
Query: 63 FTKIEATEVFFAVTKLFQSRDIGLRRMVYLMIKELSPSADEVIIVTSSLMKDMTSKTDMY 122
F EATE FFA+T+LFQS D LRRM YL IKE++ +++VIIVTSSL KDMT K D+Y
Sbjct: 61 FGTTEATEAFFAMTRLFQSNDQTLRRMCYLTIKEMANISEDVIIVTSSLTKDMTGKEDVY 120
Query: 123 RANAIRVLCRITDGTLLTQIERYLKQAIVDKNPVVASAALVSGIHLLQTTPEIVKRWSNE 182
R AIR LCRITD T+L IERY+KQAIVDK P V+S+ALVS +H+++ + ++VKRW NE
Sbjct: 121 RGPAIRALCRITDTTMLQAIERYMKQAIVDKVPSVSSSALVSSLHMVKMSFDVVKRWVNE 180
Query: 183 VQEAVQSRAALVQFHALALLHQIRQNDRLAVSKLVTSLTRGTVRSPLAQCLLIRYTTQVI 242
QEA S +VQ+HAL LL+ +R+NDRLAV+K++ T+ ++SP A C++IR ++++
Sbjct: 181 AQEAASSDNIMVQYHALGLLYHLRKNDRLAVTKMLNKFTKSGLKSPFAYCMMIRIASKLL 240
Query: 243 REAATTQTG-DRPFYDFLESCLRHKAEMVIFEAARAITELNGVTNRELTPAITVLQLFLS 301
E T+ G D P +DF+ESCLR+K EMV++EAA AI + T REL PA++VLQLF S
Sbjct: 241 EE---TEGGHDSPLFDFIESCLRNKHEMVVYEAASAIVHMPNCTARELAPAVSVLQLFCS 297
Query: 302 SSKPVLRFAAVRTLNK-----------------SLISDQNRSXXXXXXXXXXKTGNESSV 344
S K LR+AAVRTLNK +LI+D NRS KTG+ESSV
Sbjct: 298 SPKAALRYAAVRTLNKVAMKHPSAVTACNLDLENLITDSNRSIATLAITTLLKTGSESSV 357
Query: 345 DRLMKQITNFMSDIADEFKIVVVEAIRSLCLKFPLKYRSLMNFLSNILREEGGFEYKKAI 404
DRLMKQI++F+S+I+DEFK+VVV+AI +LC K+P K+ +MNFLSN+LR++GGFEYK+AI
Sbjct: 358 DRLMKQISSFVSEISDEFKVVVVQAISALCQKYPRKHSVMMNFLSNMLRDDGGFEYKRAI 417
Query: 405 VDSIVILIRDIPDAKENGLLHLCEFIEDCEFTYLSTQILHFLGTEGPKTSDPSKYIRYIY 464
VD I+ +I + P++KE GL HLCEFIEDCE T L+T+ILH LG EGP+T PSKYIR+I+
Sbjct: 418 VDCIISIIEENPESKETGLAHLCEFIEDCEHTVLATKILHLLGKEGPRTPTPSKYIRFIF 477
Query: 465 NRVHLENATVRAAAVSTLAKFGAMVDALKPRVFVLLRRCLYDGDDEEPAEQPFDINSVPK 524
NRV LE+ VRAAAVS LAKFGA D L P V VL++RC+ D DDE F +N + +
Sbjct: 478 NRVVLESEAVRAAAVSALAKFGAQNDDLLPSVLVLMQRCMMDSDDEVRDRATFYMNVLQQ 537
Query: 525 EVK 527
+ K
Sbjct: 538 KQK 540
Score = 565 (203.9 bits), Expect = 2.5e-210, Sum P(2) = 2.5e-210
Identities = 124/308 (40%), Positives = 173/308 (56%)
Query: 511 EPAEQPFDINSVPKEVKTQPLAEKKAPGKMXXXXXXXXXXXXXTVDAYEKLLSSIPEFSD 570
EP+E+PFD+ +VP + T P+ E K D Y++ LS+IPEF
Sbjct: 568 EPSEKPFDMKTVP--LATAPITEHKTEIAPVATSKLPEKLAPSRQDIYQEQLSAIPEFQG 625
Query: 571 FGKLFKSSAPVELTEAETEYAVNVVKHIFDRHVVFQYNCTNTIPEQLLENVTVIVDXXXX 630
G LFKSS PV+LTEAETEY V +KH F H++FQ++CTNT+ +QLL+ V V ++
Sbjct: 626 LGPLFKSSEPVQLTEAETEYVVRCIKHTFANHMIFQFDCTNTLNDQLLQKVLVQMEPSES 685
Query: 631 XXXXXXXXKPLRSLPYDSPGQIFGAFEKPEGVP-AVG-KFSNMLRFIVKEVDPTTXXXXX 688
P +LPY PG + PE P AV FS ++++V++ DP T
Sbjct: 686 YEVLHYV--PAANLPYSQPGSCYSLVRLPEDDPTAVSCTFSCTMKYLVRDCDPNTGEPDD 743
Query: 689 XXXXXXYQLEDLEVVAADYVMKVGVSNFRNAWESIGPDFERVDEYGLGPRESLAEAVSAV 748
Y LEDLEV AD++ KV NF AW+ +G + E+ + + L +L EAV+ +
Sbjct: 744 DGYDDEYVLEDLEVTVADHIQKVLKPNFAAAWDEVGDECEKEETFALATVRTLDEAVNNI 803
Query: 749 ISLLGMQPCEGTEVVANNSRSHTCLLSGVFIGNVKVLVRLQFGI-DGPKEVAMKLAVRSE 807
+S LGMQPCE ++ V N SH L+GVF G VLVR + + DG V +++ VRS
Sbjct: 804 VSFLGMQPCERSDKVPENKNSHVLFLAGVFRGGHDVLVRARLALADG---VTIQVTVRST 860
Query: 808 DDNVSDMI 815
DDNV D+I
Sbjct: 861 DDNVVDVI 868
>UNIPROTKB|A2VE21 [details] [associations]
symbol:COPG2 "Coatomer subunit gamma-2" species:9913 "Bos
taurus" [GO:0016192 "vesicle-mediated transport" evidence=IEA]
[GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR002553
InterPro:IPR013040 InterPro:IPR014863 InterPro:IPR015873
InterPro:IPR016024 Pfam:PF01602 Pfam:PF08752 InterPro:IPR013041
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0016192 GO:GO:0005198 SUPFAM:SSF49348
Gene3D:3.30.310.30 GO:GO:0030126 eggNOG:COG5240
GeneTree:ENSGT00390000016313 HOGENOM:HOG000184434
HOVERGEN:HBG004368 OrthoDB:EOG4DZ1TM Gene3D:2.60.40.1480
InterPro:IPR017106 PANTHER:PTHR10261 PIRSF:PIRSF037093
EMBL:BC133529 IPI:IPI00688869 RefSeq:NP_001075917.1
UniGene:Bt.22540 ProteinModelPortal:A2VE21 SMR:A2VE21 STRING:A2VE21
PRIDE:A2VE21 Ensembl:ENSBTAT00000022911 GeneID:536616
KEGG:bta:536616 CTD:26958 InParanoid:A2VE21 OMA:SEEGHES
NextBio:20876980 Uniprot:A2VE21
Length = 871
Score = 1477 (525.0 bits), Expect = 2.2e-209, Sum P(2) = 2.2e-209
Identities = 298/535 (55%), Positives = 392/535 (73%)
Query: 5 LVKKDDDRDDEAEY--SPFLGIEKGAVLQEARVFNDPQLDPRRCSQVITKLLYLLNQGET 62
++KK D +D+E+ +PF +EK AVLQEAR+FN+ ++PRRC ++TK+LYLLNQGE
Sbjct: 1 MIKKFDKKDEESGSGSNPFRHLEKSAVLQEARIFNETPINPRRCLHILTKILYLLNQGEH 60
Query: 63 FTKIEATEVFFAVTKLFQSRDIGLRRMVYLMIKELSPSADEVIIVTSSLMKDMTSKTDMY 122
F EATE FFA+T+LFQS D LRRM YL IKE++ +++VIIVTSSL KDMT K D+Y
Sbjct: 61 FGTTEATEAFFAMTRLFQSNDQTLRRMCYLTIKEMATISEDVIIVTSSLTKDMTGKEDVY 120
Query: 123 RANAIRVLCRITDGTLLTQIERYLKQAIVDKNPVVASAALVSGIHLLQTTPEIVKRWSNE 182
R AIR LCRITDGT+L IERY+KQAIVDK V+S+ALVS +H+++ + ++VKRW NE
Sbjct: 121 RGPAIRALCRITDGTMLQAIERYMKQAIVDKVSSVSSSALVSSLHMMKISYDVVKRWVNE 180
Query: 183 VQEAVQSRAALVQFHALALLHQIRQNDRLAVSKLVTSLTRGTVRSPLAQCLLIRYTTQVI 242
QEA S +VQ+HAL +L+ +++NDRLAVSK++ T+ ++S A C+LIR ++++
Sbjct: 181 AQEAASSDNIMVQYHALGVLYHLKKNDRLAVSKMLNKFTKSGLKSQFAYCMLIRIASRLL 240
Query: 243 REAATTQTGDRPFYDFLESCLRHKAEMVIFEAARAITELNGVTNRELTPAITVLQLFLSS 302
+E + + P +DF+ESCLR+K EMVI+EAA AI L T REL PA++VLQLF SS
Sbjct: 241 KE--NEEGHESPVFDFIESCLRNKHEMVIYEAASAIIHLPNCTARELAPAVSVLQLFCSS 298
Query: 303 SKPVLRFAAVRTLNK-----------------SLISDQNRSXXXXXXXXXXKTGNESSVD 345
KP LR+AAVRTLNK +LI+D NRS KTG+ESSVD
Sbjct: 299 PKPALRYAAVRTLNKVAMKHPSAVTACNLDLENLITDSNRSIATLAITTLLKTGSESSVD 358
Query: 346 RLMKQITNFMSDIADEFKIVVVEAIRSLCLKFPLKYRSLMNFLSNILREEGGFEYKKAIV 405
RLMKQI++F+S+I+DEFK+VVV+AI +LC K+P K+ +M FLSN+LR++GGFEYK+AIV
Sbjct: 359 RLMKQISSFVSEISDEFKVVVVQAISALCQKYPRKHSVMMTFLSNMLRDDGGFEYKRAIV 418
Query: 406 DSIVILIRDIPDAKENGLLHLCEFIEDCEFTYLSTQILHFLGTEGPKTSDPSKYIRYIYN 465
D I+ ++ + P++KE GL HLCEFIEDCE T L+T+ILH LG EGP+T PSKYIR+I+N
Sbjct: 419 DCIIHIVEENPESKEAGLAHLCEFIEDCEHTVLATKILHLLGKEGPRTPVPSKYIRFIFN 478
Query: 466 RVHLENATVRAAAVSTLAKFGAMVDALKPRVFVLLRRCLYDGDDEEPAEQPFDIN 520
RV LEN VRAAAVS LAKFGA + L P + VLL+RC+ D DDE F +N
Sbjct: 479 RVVLENEAVRAAAVSALAKFGAQNENLLPSILVLLQRCMMDTDDEVRDRATFYLN 533
Score = 570 (205.7 bits), Expect = 2.2e-209, Sum P(2) = 2.2e-209
Identities = 125/308 (40%), Positives = 180/308 (58%)
Query: 511 EPAEQPFDINSVPKEVKTQPLAEKKAPGKMXXXXXXXXXXXXXTVDAYEKLLSSIPEFSD 570
EP+E+PFD+ S+P + T P+ E+KA ++ D +++ L++IPEF +
Sbjct: 568 EPSEKPFDMKSIP--LATAPVFEQKA--EITLVSTKPEKLAPSRQDIFQEQLAAIPEFMN 623
Query: 571 FGKLFKSSAPVELTEAETEYAVNVVKHIFDRHVVFQYNCTNTIPEQLLENVTVIVDXXXX 630
G LFKSS PV+LTEAETEY V VKH+F H+VFQ++CTNT+ +QLLE VTV V+
Sbjct: 624 LGPLFKSSEPVQLTEAETEYFVRCVKHMFTNHIVFQFDCTNTLNDQLLEKVTVQVEPSEA 683
Query: 631 XXXXXXXXKPLRSLPYDSPGQIFGAFEKPE--GVPAVGKFSNMLRFIVKEVDPTTXXXXX 688
P SLPY+ PG + PE + A G FS ++F V++ DP T
Sbjct: 684 YEVLCCVPAP--SLPYNQPGVCYTLVRLPEDDSIAAAGTFSCTMKFTVRDCDPDTGVPTE 741
Query: 689 XXXXXXYQLEDLEVVAADYVMKVGVSNFRNAWESIGPDFERVDEYGLGPRESLAEAVSAV 748
Y LEDLEV +D++ KV NF AWE +G FE+ + + L ++L EAV+ +
Sbjct: 742 EGYDDEYVLEDLEVTVSDHIQKVMKPNFAAAWEEVGNTFEKEETFALSSTKTLEEAVNNI 801
Query: 749 ISLLGMQPCEGTEVVANNSRSHTCLLSGVFIGNVKVLVRLQFGI-DGPKEVAMKLAVRSE 807
I+ LGMQPCE ++ V N SH+ L+GV+ G +LVR + + DG V M++ VRS+
Sbjct: 802 ITFLGMQPCERSDKVPENKNSHSLYLAGVYRGGYDLLVRSRLALADG---VTMQVTVRSK 858
Query: 808 DDNVSDMI 815
+ D+I
Sbjct: 859 EGTPVDVI 866
>UNIPROTKB|Q9UBF2 [details] [associations]
symbol:COPG2 "Coatomer subunit gamma-2" species:9606 "Homo
sapiens" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=IDA]
[GO:0030126 "COPI vesicle coat" evidence=IDA] [GO:0006890
"retrograde vesicle-mediated transport, Golgi to ER" evidence=TAS]
InterPro:IPR002553 InterPro:IPR009028 InterPro:IPR013040
InterPro:IPR014863 InterPro:IPR015873 InterPro:IPR016024
Pfam:PF01602 Pfam:PF08752 InterPro:IPR013041 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0005198 GO:GO:0006891 EMBL:CH236950
EMBL:CH471070 SUPFAM:SSF55711 SUPFAM:SSF49348 Gene3D:3.30.310.30
GO:GO:0030126 GO:GO:0006890 EMBL:AC007938 eggNOG:COG5240
HOVERGEN:HBG004368 Gene3D:2.60.40.1480 InterPro:IPR017106
PANTHER:PTHR10261 PIRSF:PIRSF037093 CTD:26958 EMBL:AF207598
EMBL:AF157833 EMBL:AB047847 EMBL:AK291409 EMBL:AC090520
EMBL:AC009274 EMBL:BC017443 IPI:IPI00002557 RefSeq:NP_036265.3
UniGene:Hs.6421 ProteinModelPortal:Q9UBF2 SMR:Q9UBF2 IntAct:Q9UBF2
STRING:Q9UBF2 PhosphoSite:Q9UBF2 DMDM:13124090 PaxDb:Q9UBF2
PeptideAtlas:Q9UBF2 PRIDE:Q9UBF2 GeneID:26958 KEGG:hsa:26958
UCSC:uc003vqh.1 GeneCards:GC07M130146 H-InvDB:HIX0201202
HGNC:HGNC:2237 MIM:604355 neXtProt:NX_Q9UBF2 PharmGKB:PA26753
GenomeRNAi:26958 NextBio:49412 CleanEx:HS_COPG2
Genevestigator:Q9UBF2 Uniprot:Q9UBF2
Length = 871
Score = 1489 (529.2 bits), Expect = 2.9e-209, Sum P(2) = 2.9e-209
Identities = 301/536 (56%), Positives = 395/536 (73%)
Query: 5 LVKKDDDRDDEAEY--SPFLGIEKGAVLQEARVFNDPQLDPRRCSQVITKLLYLLNQGET 62
++KK D +D+E+ +PF +EK AVLQEAR+FN+ ++PRRC ++TK+LYLLNQGE
Sbjct: 1 MIKKFDKKDEESGSGSNPFQHLEKSAVLQEARIFNETPINPRRCLHILTKILYLLNQGEH 60
Query: 63 FTKIEATEVFFAVTKLFQSRDIGLRRMVYLMIKELSPSADEVIIVTSSLMKDMTSKTDMY 122
F EATE FFA+T+LFQS D LRRM YL IKE++ +++VIIVTSSL KDMT K D+Y
Sbjct: 61 FGTTEATEAFFAMTRLFQSNDQTLRRMCYLTIKEMATISEDVIIVTSSLTKDMTGKEDVY 120
Query: 123 RANAIRVLCRITDGTLLTQIERYLKQAIVDKNPVVASAALVSGIHLLQTTPEIVKRWSNE 182
R AIR LCRITDGT+L IERY+KQAIVDK V+S+ALVS +H+++ + ++VKRW NE
Sbjct: 121 RGPAIRALCRITDGTMLQAIERYMKQAIVDKVSSVSSSALVSSLHMMKISYDVVKRWINE 180
Query: 183 VQEAVQSRAALVQFHALALLHQIRQNDRLAVSKLVTSLTRGTVRSPLAQCLLIRYTTQVI 242
QEA S +VQ+HAL +L+ +R+NDRLAVSK++ T+ ++S A C+LIR ++++
Sbjct: 181 AQEAASSDNIMVQYHALGVLYHLRKNDRLAVSKMLNKFTKSGLKSQFAYCMLIRIASRLL 240
Query: 243 REAATTQTG-DRPFYDFLESCLRHKAEMVIFEAARAITELNGVTNRELTPAITVLQLFLS 301
+E T+ G + P +DF+ESCLR+K EMVI+EAA AI L T REL PA++VLQLF S
Sbjct: 241 KE---TEDGHESPLFDFIESCLRNKHEMVIYEAASAIIHLPNCTARELAPAVSVLQLFCS 297
Query: 302 SSKPVLRFAAVRTLNK-----------------SLISDQNRSXXXXXXXXXXKTGNESSV 344
S KP LR+AAVRTLNK +LI+D NRS KTG+ESSV
Sbjct: 298 SPKPALRYAAVRTLNKVAMKHPSAVTACNLDLENLITDSNRSIATLAITTLLKTGSESSV 357
Query: 345 DRLMKQITNFMSDIADEFKIVVVEAIRSLCLKFPLKYRSLMNFLSNILREEGGFEYKKAI 404
DRLMKQI++F+S+I+DEFK+VVV+AI +LC K+P K+ +M FLSN+LR++GGFEYK+AI
Sbjct: 358 DRLMKQISSFVSEISDEFKVVVVQAISALCQKYPRKHSVMMTFLSNMLRDDGGFEYKRAI 417
Query: 405 VDSIVILIRDIPDAKENGLLHLCEFIEDCEFTYLSTQILHFLGTEGPKTSDPSKYIRYIY 464
VD I+ ++ + P++KE GL HLCEFIEDCE T L+T+ILH LG EGP+T PSKYIR+I+
Sbjct: 418 VDCIISIVEENPESKEAGLAHLCEFIEDCEHTVLATKILHLLGKEGPRTPVPSKYIRFIF 477
Query: 465 NRVHLENATVRAAAVSTLAKFGAMVDALKPRVFVLLRRCLYDGDDEEPAEQPFDIN 520
NRV LEN VRAAAVS LAKFGA ++L P + VLL+RC+ D DDE F +N
Sbjct: 478 NRVVLENEAVRAAAVSALAKFGAQNESLLPSILVLLQRCMMDTDDEVRDRATFYLN 533
Score = 557 (201.1 bits), Expect = 2.9e-209, Sum P(2) = 2.9e-209
Identities = 123/308 (39%), Positives = 180/308 (58%)
Query: 511 EPAEQPFDINSVPKEVKTQPLAEKKAPGKMXXXXXXXXXXXXXTVDAYEKLLSSIPEFSD 570
EP+E+PFD+ S+P + P+ E+KA ++ D +++ L++IPEF +
Sbjct: 568 EPSEKPFDMKSIP--LAMAPVFEQKA--EITLVATKPEKLAPSRQDIFQEQLAAIPEFLN 623
Query: 571 FGKLFKSSAPVELTEAETEYAVNVVKHIFDRHVVFQYNCTNTIPEQLLENVTVIVDXXXX 630
G LFKSS PV+LTEAETEY V +KH+F H+VFQ++CTNT+ +QLLE VTV ++
Sbjct: 624 IGPLFKSSEPVQLTEAETEYFVRCIKHMFTNHIVFQFDCTNTLNDQLLEKVTVQMEPSDS 683
Query: 631 XXXXXXXXKPLRSLPYDSPGQIFGAFEKPEGVP-AV-GKFSNMLRFIVKEVDPTTXXXXX 688
P SLPY+ PG + P+ P AV G FS ++F V++ DP T
Sbjct: 684 YEVLSCIPAP--SLPYNQPGICYTLVRLPDDDPTAVAGSFSCTMKFTVRDCDPNTGVPDE 741
Query: 689 XXXXXXYQLEDLEVVAADYVMKVGVSNFRNAWESIGPDFERVDEYGLGPRESLAEAVSAV 748
Y LEDLEV +D++ KV NF AWE +G FE+ + + L ++L EAV+ +
Sbjct: 742 DGYDDEYVLEDLEVTVSDHIQKVLKPNFAAAWEEVGDTFEKEETFALSSTKTLEEAVNNI 801
Query: 749 ISLLGMQPCEGTEVVANNSRSHTCLLSGVFIGNVKVLVRLQFGI-DGPKEVAMKLAVRSE 807
I+ LGMQPCE ++ V N SH+ L+G+F G +LVR + + DG V M++ VRS+
Sbjct: 802 ITFLGMQPCERSDKVPENKNSHSLYLAGIFRGGYDLLVRSRLALADG---VTMQVTVRSK 858
Query: 808 DDNVSDMI 815
+ D+I
Sbjct: 859 ERTPVDVI 866
>MGI|MGI:1858683 [details] [associations]
symbol:Copg2 "coatomer protein complex, subunit gamma 2"
species:10090 "Mus musculus" [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005798
"Golgi-associated vesicle" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006891 "intra-Golgi vesicle-mediated transport"
evidence=ISO] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
[GO:0030126 "COPI vesicle coat" evidence=ISO] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] InterPro:IPR002553
InterPro:IPR009028 InterPro:IPR013040 InterPro:IPR014863
InterPro:IPR015873 InterPro:IPR016024 Pfam:PF01602 Pfam:PF08752
InterPro:IPR013041 MGI:MGI:1858683 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 PROSITE:PS50077 GO:GO:0016192
GO:GO:0005198 SUPFAM:SSF55711 SUPFAM:SSF49348 Gene3D:3.30.310.30
GO:GO:0030126 eggNOG:COG5240 GeneTree:ENSGT00390000016313
HOGENOM:HOG000184434 HOVERGEN:HBG004368 OrthoDB:EOG4DZ1TM
Gene3D:2.60.40.1480 InterPro:IPR017106 PANTHER:PTHR10261
PIRSF:PIRSF037093 CTD:26958 EMBL:AF205065 EMBL:AJ251067
EMBL:AK088492 EMBL:AK149462 EMBL:AK163668 EMBL:BC049178
EMBL:BC145898 EMBL:BC145900 IPI:IPI00316359 IPI:IPI00896643
IPI:IPI00896657 IPI:IPI00896682 RefSeq:NP_059506.1
UniGene:Mm.381860 UniGene:Mm.39896 ProteinModelPortal:Q9QXK3
SMR:Q9QXK3 STRING:Q9QXK3 PhosphoSite:Q9QXK3 PaxDb:Q9QXK3
PRIDE:Q9QXK3 Ensembl:ENSMUST00000048774 Ensembl:ENSMUST00000166192
GeneID:54160 KEGG:mmu:54160 UCSC:uc009bfv.1 UCSC:uc012ejo.1
InParanoid:Q9QXK3 OMA:KETEEGH ChiTaRS:COPG2 NextBio:311000
Bgee:Q9QXK3 CleanEx:MM_COPG2 Genevestigator:Q9QXK3
GermOnline:ENSMUSG00000025607 Uniprot:Q9QXK3
Length = 871
Score = 1491 (529.9 bits), Expect = 4.2e-208, Sum P(2) = 4.2e-208
Identities = 300/535 (56%), Positives = 394/535 (73%)
Query: 5 LVKKDDDRDDEAEY--SPFLGIEKGAVLQEARVFNDPQLDPRRCSQVITKLLYLLNQGET 62
++KK D +D+E+ +PF +EK AVLQEAR+FN+ ++PRRC ++TK+LYLLNQGE
Sbjct: 1 MIKKFDKKDEESGSGSNPFQHLEKSAVLQEARIFNETPINPRRCLHILTKILYLLNQGEH 60
Query: 63 FTKIEATEVFFAVTKLFQSRDIGLRRMVYLMIKELSPSADEVIIVTSSLMKDMTSKTDMY 122
F +EATE FFA+T+LFQS D LRRM YL IKE++ +++VIIVTSSL KDMT K D+Y
Sbjct: 61 FGTMEATEAFFAMTRLFQSNDQTLRRMCYLTIKEMATISEDVIIVTSSLTKDMTGKEDVY 120
Query: 123 RANAIRVLCRITDGTLLTQIERYLKQAIVDKNPVVASAALVSGIHLLQTTPEIVKRWSNE 182
R AIR LCRITDGT+L +ERY+KQAIVDK VAS+ALVS +H+++ + ++VKRW NE
Sbjct: 121 RGPAIRALCRITDGTMLQAVERYMKQAIVDKVSSVASSALVSSLHMMKISYDVVKRWINE 180
Query: 183 VQEAVQSRAALVQFHALALLHQIRQNDRLAVSKLVTSLTRGTVRSPLAQCLLIRYTTQVI 242
QEA S +VQ+HAL +L+ +R+NDRLAVSK++ T+ ++S A C+LIR ++++
Sbjct: 181 AQEAASSDNIMVQYHALGVLYHLRKNDRLAVSKMLNKFTKSGLKSQFAYCMLIRIASRLL 240
Query: 243 REAATTQTGDRPFYDFLESCLRHKAEMVIFEAARAITELNGVTNRELTPAITVLQLFLSS 302
+E+ + P +DF+ESCLR+K EMVI+EAA AI L T REL PA++VLQLF SS
Sbjct: 241 KESEDGH--ESPLFDFIESCLRNKHEMVIYEAASAIIHLPNCTARELAPAVSVLQLFCSS 298
Query: 303 SKPVLRFAAVRTLNK-----------------SLISDQNRSXXXXXXXXXXKTGNESSVD 345
KP LR+AAVRTLNK +LI+D NRS KTG+ESSVD
Sbjct: 299 PKPALRYAAVRTLNKVAMKHPSAVTACNLDLENLITDSNRSIATLAITTLLKTGSESSVD 358
Query: 346 RLMKQITNFMSDIADEFKIVVVEAIRSLCLKFPLKYRSLMNFLSNILREEGGFEYKKAIV 405
RLMKQI++F+S+I+DEFK+VVV+AI +LC K+P K+ +M FLSN+LR++GGFEYKKAIV
Sbjct: 359 RLMKQISSFVSEISDEFKVVVVQAISALCHKYPRKHSVMMTFLSNMLRDDGGFEYKKAIV 418
Query: 406 DSIVILIRDIPDAKENGLLHLCEFIEDCEFTYLSTQILHFLGTEGPKTSDPSKYIRYIYN 465
D I+ ++ + P++KE GL HLCEFIEDCE T L+T+ILH LG EGP+T PSKYIR+I+N
Sbjct: 419 DCIISIVEENPESKEAGLAHLCEFIEDCEHTVLATKILHLLGKEGPRTPVPSKYIRFIFN 478
Query: 466 RVHLENATVRAAAVSTLAKFGAMVDALKPRVFVLLRRCLYDGDDEEPAEQPFDIN 520
RV LEN VRAAAVS LAKFGA ++L P + VLL+RC+ D DDE F +N
Sbjct: 479 RVVLENEAVRAAAVSALAKFGAQNESLLPSILVLLQRCMMDTDDEVRDRATFYLN 533
Score = 544 (196.6 bits), Expect = 4.2e-208, Sum P(2) = 4.2e-208
Identities = 122/308 (39%), Positives = 180/308 (58%)
Query: 511 EPAEQPFDINSVPKEVKTQPLAEKKAPGKMXXXXXXXXXXXXXTVDAYEKLLSSIPEFSD 570
EP+E+PFD+ S+P + P+ E+K+ ++ D +++ L++IPEF +
Sbjct: 568 EPSEKPFDMKSIP--LAMAPVFEQKS--EITLVTPKPEKLAPSRQDIFQEQLAAIPEFMN 623
Query: 571 FGKLFKSSAPVELTEAETEYAVNVVKHIFDRHVVFQYNCTNTIPEQLLENVTVIVDXXXX 630
G LFKSS PV+LTEAETEY V VKH+F H+VFQ++CTNT+ +QLLE VTV ++
Sbjct: 624 LGPLFKSSEPVQLTEAETEYFVRCVKHMFTDHIVFQFDCTNTLNDQLLEKVTVQMEPSDS 683
Query: 631 XXXXXXXXKPLRSLPYDSPGQIFGAFEKPEGVP-AV-GKFSNMLRFIVKEVDPTTXXXXX 688
P SLPY+ PG + P+ P AV G FS ++F V++ DP T
Sbjct: 684 YEVLCCIPAP--SLPYNQPGICYTLVRLPDEDPTAVAGTFSCTMKFTVRDCDPNTGVPDE 741
Query: 689 XXXXXXYQLEDLEVVAADYVMKVGVSNFRNAWESIGPDFERVDEYGLGPRESLAEAVSAV 748
Y LEDLEV +D++ K+ NF AWE +G FE+ + + L ++L EAV+ +
Sbjct: 742 DGYDDEYVLEDLEVTVSDHIQKILKPNFAAAWEEVGDAFEKEETFALSSTKTLEEAVNNI 801
Query: 749 ISLLGMQPCEGTEVVANNSRSHTCLLSGVFIGNVKVLVRLQFGI-DGPKEVAMKLAVRSE 807
I+ LGMQPCE ++ V N SH+ L+GV+ G +LVR + + DG V M++ VRS+
Sbjct: 802 ITFLGMQPCERSDKVPENKNSHSLYLAGVYRGGYDLLVRSRLALADG---VTMQVTVRSK 858
Query: 808 DDNVSDMI 815
+ D+I
Sbjct: 859 ERTPVDVI 866
>UNIPROTKB|F1SNE9 [details] [associations]
symbol:COPG2 "Coatomer subunit gamma" species:9823 "Sus
scrofa" [GO:0016192 "vesicle-mediated transport" evidence=IEA]
[GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR002553
InterPro:IPR013040 InterPro:IPR014863 InterPro:IPR015873
InterPro:IPR016024 Pfam:PF01602 Pfam:PF08752 InterPro:IPR013041
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016192 GO:GO:0005198 SUPFAM:SSF49348 Gene3D:3.30.310.30
GO:GO:0030126 GeneTree:ENSGT00390000016313 Gene3D:2.60.40.1480
InterPro:IPR017106 PANTHER:PTHR10261 PIRSF:PIRSF037093 OMA:SEEGHES
EMBL:CU915599 EMBL:FP236769 Ensembl:ENSSSCT00000018023
Uniprot:F1SNE9
Length = 871
Score = 1470 (522.5 bits), Expect = 1.1e-207, Sum P(2) = 1.1e-207
Identities = 297/535 (55%), Positives = 392/535 (73%)
Query: 5 LVKKDDDRDDEAEY--SPFLGIEKGAVLQEARVFNDPQLDPRRCSQVITKLLYLLNQGET 62
++KK D +D+E+ +PF +EK AVLQEAR+FN+ ++PRRC ++TK+LYLLNQGE
Sbjct: 1 MIKKFDKKDEESGSGSNPFRHLEKSAVLQEARIFNETPINPRRCLHILTKILYLLNQGEY 60
Query: 63 FTKIEATEVFFAVTKLFQSRDIGLRRMVYLMIKELSPSADEVIIVTSSLMKDMTSKTDMY 122
F EATE FFA+T+LFQS D LRRM YL IKE++ +++VIIVTSSL KDMT K D+Y
Sbjct: 61 FGTTEATEAFFAMTRLFQSNDQTLRRMCYLTIKEMATISEDVIIVTSSLTKDMTGKEDVY 120
Query: 123 RANAIRVLCRITDGTLLTQIERYLKQAIVDKNPVVASAALVSGIHLLQTTPEIVKRWSNE 182
R AIR LCRITDGT+L IERY+KQAIVDK V+S+ALVS +H+++ + ++VKRW NE
Sbjct: 121 RGPAIRALCRITDGTMLQAIERYMKQAIVDKVSSVSSSALVSSLHMMKISYDVVKRWVNE 180
Query: 183 VQEAVQSRAALVQFHALALLHQIRQNDRLAVSKLVTSLTRGTVRSPLAQCLLIRYTTQVI 242
QEA S +VQ+HAL +L+ +++NDRLAVSK++ T+ ++S A C+LIR ++++
Sbjct: 181 AQEAASSDNIMVQYHALGVLYHLKKNDRLAVSKMLNKFTKCGLKSQFAYCMLIRIASRLL 240
Query: 243 REAATTQTGDRPFYDFLESCLRHKAEMVIFEAARAITELNGVTNRELTPAITVLQLFLSS 302
+E + + P +DF+ESCLR+K EMVI+EAA AI L + REL PA++VLQLF SS
Sbjct: 241 KE--NEEGHESPVFDFIESCLRNKHEMVIYEAASAIIHLPNCSARELAPAVSVLQLFCSS 298
Query: 303 SKPVLRFAAVRTLNK-----------------SLISDQNRSXXXXXXXXXXKTGNESSVD 345
KP LR+AAVRTLNK +LI+D NRS KTG+ESSVD
Sbjct: 299 PKPALRYAAVRTLNKVAMKHPSAVTACNLDLENLITDSNRSIATLAITTLLKTGSESSVD 358
Query: 346 RLMKQITNFMSDIADEFKIVVVEAIRSLCLKFPLKYRSLMNFLSNILREEGGFEYKKAIV 405
RLMKQI++F+S+I+DEFK+VVV+AI +LC K+P K+ +M FLSN+LR++GGFEYK+AIV
Sbjct: 359 RLMKQISSFVSEISDEFKVVVVQAISALCQKYPRKHSVMMTFLSNMLRDDGGFEYKRAIV 418
Query: 406 DSIVILIRDIPDAKENGLLHLCEFIEDCEFTYLSTQILHFLGTEGPKTSDPSKYIRYIYN 465
D I+ ++ + P++KE GL HLCEFIEDCE T L+T+ILH LG EGP+T PSKYIR+I+N
Sbjct: 419 DCIINIVEENPESKEAGLAHLCEFIEDCEHTVLATKILHLLGKEGPRTPVPSKYIRFIFN 478
Query: 466 RVHLENATVRAAAVSTLAKFGAMVDALKPRVFVLLRRCLYDGDDEEPAEQPFDIN 520
RV LEN VRAAAVS LAKFGA + L P + VLL+RC+ D DDE F +N
Sbjct: 479 RVVLENEAVRAAAVSALAKFGAQNENLLPSILVLLQRCMMDTDDEVRDRATFYLN 533
Score = 561 (202.5 bits), Expect = 1.1e-207, Sum P(2) = 1.1e-207
Identities = 124/308 (40%), Positives = 178/308 (57%)
Query: 511 EPAEQPFDINSVPKEVKTQPLAEKKAPGKMXXXXXXXXXXXXXTVDAYEKLLSSIPEFSD 570
EP+E+PFD+ S+P + P+ E+K+ ++ D +++ L++IPEF +
Sbjct: 568 EPSEKPFDMKSIP--LAMAPVFEQKS--EITLVATKPEKLAPSRQDIFQEQLAAIPEFMN 623
Query: 571 FGKLFKSSAPVELTEAETEYAVNVVKHIFDRHVVFQYNCTNTIPEQLLENVTVIVDXXXX 630
G LFKSS PV+LTEAETEY V VKH+F HVVFQ++CTNT+ +QLLE VTV V+
Sbjct: 624 LGPLFKSSEPVQLTEAETEYFVRCVKHMFTNHVVFQFDCTNTLNDQLLEKVTVQVEPSDS 683
Query: 631 XXXXXXXXKPLRSLPYDSPGQIFGAFEKPE--GVPAVGKFSNMLRFIVKEVDPTTXXXXX 688
P SLPY+ PG + P+ + A G FS ++F V++ DP T
Sbjct: 684 YEVLCCI--PAASLPYNQPGICYTLVRLPDDDSIAAAGTFSCTMKFTVRDCDPDTGVPAE 741
Query: 689 XXXXXXYQLEDLEVVAADYVMKVGVSNFRNAWESIGPDFERVDEYGLGPRESLAEAVSAV 748
Y LEDLEV +D++ KV NF AWE +G FE+ + + L ++L EAVS +
Sbjct: 742 EGYDDEYVLEDLEVTVSDHIQKVLKPNFAAAWEEVGDTFEKEETFALSSTKTLEEAVSNI 801
Query: 749 ISLLGMQPCEGTEVVANNSRSHTCLLSGVFIGNVKVLVRLQFGI-DGPKEVAMKLAVRSE 807
I+ LGMQPCE ++ V N SH L+GV+ G +LVR + + DG V M++ VRS+
Sbjct: 802 ITFLGMQPCERSDKVPENKNSHALYLAGVYRGGCDLLVRSRLALADG---VTMQVTVRSK 858
Query: 808 DDNVSDMI 815
+ D+I
Sbjct: 859 EGTPVDVI 866
>UNIPROTKB|E2RPG9 [details] [associations]
symbol:COPG1 "Coatomer subunit gamma" species:9615 "Canis
lupus familiaris" [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0005198 "structural molecule activity" evidence=IEA]
InterPro:IPR002553 InterPro:IPR009028 InterPro:IPR013040
InterPro:IPR014863 InterPro:IPR015873 InterPro:IPR016024
Pfam:PF01602 Pfam:PF08752 InterPro:IPR013041 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
GO:GO:0005198 SUPFAM:SSF55711 SUPFAM:SSF49348 Gene3D:3.30.310.30
GO:GO:0030126 CTD:22820 GeneTree:ENSGT00390000016313
Gene3D:2.60.40.1480 InterPro:IPR017106 PANTHER:PTHR10261
PIRSF:PIRSF037093 OMA:WDEVGEE EMBL:AAEX03012021 RefSeq:XP_533723.2
Ensembl:ENSCAFT00000006920 GeneID:476517 KEGG:cfa:476517
Uniprot:E2RPG9
Length = 874
Score = 1484 (527.5 bits), Expect = 1.4e-207, Sum P(2) = 1.4e-207
Identities = 300/542 (55%), Positives = 396/542 (73%)
Query: 5 LVKKDDDRDDEAE--YSPFLGIEKGAVLQEARVFNDPQLDPRRCSQVITKLLYLLNQGET 62
++KK D +D+E+ +PF +EK AVLQEARVFN+ ++PR+C+ ++TK+LYL+NQGE
Sbjct: 1 MLKKFDKKDEESGGGSNPFQHLEKSAVLQEARVFNETPINPRKCAHILTKILYLINQGEH 60
Query: 63 FTKIEATEVFFAVTKLFQSRDIGLRRMVYLMIKELSPSADEVIIVTSSLMKDMTSKTDMY 122
EATE FFA+TKLFQS D LRRM YL IKE+S A++VIIVTSSL KDMT K D Y
Sbjct: 61 LGTTEATEAFFAMTKLFQSNDPTLRRMCYLTIKEMSCIAEDVIIVTSSLTKDMTGKEDNY 120
Query: 123 RANAIRVLCRITDGTLLTQIERYLKQAIVDKNPVVASAALVSGIHLLQTTPEIVKRWSNE 182
R A+R LC+ITD T+L IERY+KQAIVDK P V+S+ALVS +HLL+ + ++VKRW NE
Sbjct: 121 RGPAVRALCQITDSTMLQAIERYMKQAIVDKVPSVSSSALVSSLHLLKCSFDVVKRWVNE 180
Query: 183 VQEAVQSRAALVQFHALALLHQIRQNDRLAVSKLVTSLTRGTVRSPLAQCLLIRYTTQVI 242
QEA S +VQ+HAL LL+ +R+NDRLAV+K+++ TR ++SP A C++IR ++ +
Sbjct: 181 AQEAASSDNIMVQYHALGLLYHVRKNDRLAVNKMISKFTRHGLKSPFAYCMMIRVASKQL 240
Query: 243 REAATTQTGDRPFYDFLESCLRHKAEMVIFEAARAITELNGVTNRELTPAITVLQLFLSS 302
E ++ D P +DF+ESCLR+K EMV++EAA AI L G + +EL PA++VLQLF SS
Sbjct: 241 EEEDGSR--DSPLFDFIESCLRNKHEMVVYEAASAIVNLPGCSAKELAPAVSVLQLFCSS 298
Query: 303 SKPVLRFAAVRTLNK-----------------SLISDQNRSXXXXXXXXXXKTGNESSVD 345
K LR+AAVRTLNK +L++D NRS KTG+ESS+D
Sbjct: 299 PKAALRYAAVRTLNKVAMKHPSAVTACNLDLENLVTDSNRSIATLAITTLLKTGSESSID 358
Query: 346 RLMKQITNFMSDIADEFKIVVVEAIRSLCLKFPLKYRSLMNFLSNILREEGGFEYKKAIV 405
RLMKQI++FMS+I+DEFK+VVV+AI +LC K+P K+ LMNFL +LREEGGFEYK+AIV
Sbjct: 359 RLMKQISSFMSEISDEFKVVVVQAISALCQKYPRKHAVLMNFLFTMLREEGGFEYKRAIV 418
Query: 406 DSIVILIRDIPDAKENGLLHLCEFIEDCEFTYLSTQILHFLGTEGPKTSDPSKYIRYIYN 465
D I+ +I + ++KE GL HLCEFIEDCEFT L+T+ILH LG EGPKT++PSKYIR+IYN
Sbjct: 419 DCIISIIEENTESKETGLSHLCEFIEDCEFTVLATRILHLLGQEGPKTNNPSKYIRFIYN 478
Query: 466 RVHLENATVRAAAVSTLAKFGAMVDALKPRVFVLLRRCLYDGDDEEPAEQPFDINSVPKE 525
RV LE+ VRA AVS LAKFGA + + P + VLL+RC+ D D+E F +N + ++
Sbjct: 479 RVVLEHEEVRAGAVSALAKFGAQNEEMLPSILVLLKRCVMDDDNEVRDRATFYLNVLEQK 538
Query: 526 VK 527
K
Sbjct: 539 QK 540
Score = 546 (197.3 bits), Expect = 1.4e-207, Sum P(2) = 1.4e-207
Identities = 119/308 (38%), Positives = 174/308 (56%)
Query: 511 EPAEQPFDINSVPKEVKTQPLAEKKAPGKMXXXXXXXXXXXXXTVDAYEKLLSSIPEFSD 570
EP+E+PFD+ SVP + T P+AE++ + +++ L+++PEF
Sbjct: 568 EPSEKPFDLKSVP--LATTPMAEQRTESTPITAAKQPEKVAATRQEIFQEQLAAVPEFHG 625
Query: 571 FGKLFKSSA-PVELTEAETEYAVNVVKHIFDRHVVFQYNCTNTIPEQLLENVTVIVDXXX 629
G LFKSS PV LTE+ETEY + KH F H+VFQ++CTNT+ +Q LENVTV ++
Sbjct: 626 LGPLFKSSPEPVALTESETEYVIRCTKHTFTDHMVFQFDCTNTLNDQTLENVTVQMEPTE 685
Query: 630 XXXXXXXXXKPLRSLPYDSPGQIFGAFEKPEGVP-AVG-KFSNMLRFIVKEVDPTTXXXX 687
P RSLPY+ PG + P+ P AV FS M++F VK+ DPTT
Sbjct: 686 AYEVVSYV--PARSLPYNQPGTCYTLVSLPKEDPTAVACTFSCMMKFTVKDCDPTTGETD 743
Query: 688 XXXXXXXYQLEDLEVVAADYVMKVGVSNFRNAWESIGPDFERVDEYGLGPRESLAEAVSA 747
Y LEDLE+ AD++ KV NF AW+ +G +FE+ + + L ++L EAV
Sbjct: 744 DEGYEDEYVLEDLEITVADHIQKVMKLNFEAAWDEVGDEFEKEETFTLSTIKTLEEAVGN 803
Query: 748 VISLLGMQPCEGTEVVANNSRSHTCLLSGVFIGNVKVLVRLQFGIDGPKEVAMKLAVRSE 807
++ LGM PCE ++ V +N +HT LL+GVF G +LVR + + V M++ RS
Sbjct: 804 IVKFLGMHPCERSDKVPDNKNTHTLLLAGVFRGGHDILVRSRLLL--LDTVTMQVTARSS 861
Query: 808 DDNVSDMI 815
++ D+I
Sbjct: 862 EELPVDII 869
>UNIPROTKB|Q9Y678 [details] [associations]
symbol:COPG1 "Coatomer subunit gamma-1" species:9606 "Homo
sapiens" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0030126 "COPI vesicle coat" evidence=ISS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=TAS] [GO:0016044 "cellular membrane
organization" evidence=TAS] [GO:0048205 "COPI coating of Golgi
vesicle" evidence=TAS] [GO:0051683 "establishment of Golgi
localization" evidence=ISS] [GO:0072384 "organelle transport along
microtubule" evidence=ISS] [GO:0000139 "Golgi membrane"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] Reactome:REACT_11123 InterPro:IPR002553
InterPro:IPR009028 InterPro:IPR013040 InterPro:IPR014863
InterPro:IPR015873 InterPro:IPR016024 Pfam:PF01602 Pfam:PF08752
InterPro:IPR013041 GO:GO:0005829 GO:GO:0005634 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0005198 EMBL:CH471052 SUPFAM:SSF55711
SUPFAM:SSF49348 Gene3D:3.30.310.30 GO:GO:0030126 GO:GO:0048205
GO:GO:0006890 GO:GO:0051683 GO:GO:0072384 CTD:22820 eggNOG:COG5240
HOGENOM:HOG000184434 HOVERGEN:HBG004368 OrthoDB:EOG4DZ1TM
Gene3D:2.60.40.1480 InterPro:IPR017106 PANTHER:PTHR10261
PIRSF:PIRSF037093 EMBL:AB047846 EMBL:AF100756 EMBL:AK001724
EMBL:AK291693 EMBL:BC066650 IPI:IPI00783982 RefSeq:NP_057212.1
UniGene:Hs.518250 PDB:1R4X PDBsum:1R4X ProteinModelPortal:Q9Y678
SMR:Q9Y678 DIP:DIP-29872N IntAct:Q9Y678 MINT:MINT-4657598
STRING:Q9Y678 PhosphoSite:Q9Y678 DMDM:12229771 PaxDb:Q9Y678
PeptideAtlas:Q9Y678 PRIDE:Q9Y678 Ensembl:ENST00000314797
GeneID:22820 KEGG:hsa:22820 UCSC:uc003els.3 GeneCards:GC03P128969
HGNC:HGNC:2236 HPA:HPA037867 neXtProt:NX_Q9Y678 PharmGKB:PA26752
InParanoid:Q9Y678 OMA:WDEVGEE ChiTaRS:COPG1
EvolutionaryTrace:Q9Y678 GenomeRNAi:22820 NextBio:43212
ArrayExpress:Q9Y678 Bgee:Q9Y678 CleanEx:HS_COPG
Genevestigator:Q9Y678 GermOnline:ENSG00000181789 Uniprot:Q9Y678
Length = 874
Score = 1485 (527.8 bits), Expect = 2.9e-207, Sum P(2) = 2.9e-207
Identities = 300/542 (55%), Positives = 397/542 (73%)
Query: 5 LVKKDDDRDDEAE--YSPFLGIEKGAVLQEARVFNDPQLDPRRCSQVITKLLYLLNQGET 62
++KK D +D+E+ +PF +EK AVLQEARVFN+ ++PR+C+ ++TK+LYL+NQGE
Sbjct: 1 MLKKFDKKDEESGGGSNPFQHLEKSAVLQEARVFNETPINPRKCAHILTKILYLINQGEH 60
Query: 63 FTKIEATEVFFAVTKLFQSRDIGLRRMVYLMIKELSPSADEVIIVTSSLMKDMTSKTDMY 122
EATE FFA+TKLFQS D LRRM YL IKE+S A++VIIVTSSL KDMT K D Y
Sbjct: 61 LGTTEATEAFFAMTKLFQSNDPTLRRMCYLTIKEMSCIAEDVIIVTSSLTKDMTGKEDNY 120
Query: 123 RANAIRVLCRITDGTLLTQIERYLKQAIVDKNPVVASAALVSGIHLLQTTPEIVKRWSNE 182
R A+R LC+ITD T+L IERY+KQAIVDK P V+S+ALVS +HLL+ + ++VKRW NE
Sbjct: 121 RGPAVRALCQITDSTMLQAIERYMKQAIVDKVPSVSSSALVSSLHLLKCSFDVVKRWVNE 180
Query: 183 VQEAVQSRAALVQFHALALLHQIRQNDRLAVSKLVTSLTRGTVRSPLAQCLLIRYTTQVI 242
QEA S +VQ+HAL LL+ +R+NDRLAV+K+++ +TR ++SP A C++IR ++ +
Sbjct: 181 AQEAASSDNIMVQYHALGLLYHVRKNDRLAVNKMISKVTRHGLKSPFAYCMMIRVASKQL 240
Query: 243 REAATTQTGDRPFYDFLESCLRHKAEMVIFEAARAITELNGVTNRELTPAITVLQLFLSS 302
E ++ D P +DF+ESCLR+K EMV++EAA AI L G + +EL PA++VLQLF SS
Sbjct: 241 EEEDGSR--DSPLFDFIESCLRNKHEMVVYEAASAIVNLPGCSAKELAPAVSVLQLFCSS 298
Query: 303 SKPVLRFAAVRTLNK-----------------SLISDQNRSXXXXXXXXXXKTGNESSVD 345
K LR+AAVRTLNK +L++D NRS KTG+ESS+D
Sbjct: 299 PKAALRYAAVRTLNKVAMKHPSAVTACNLDLENLVTDSNRSIATLAITTLLKTGSESSID 358
Query: 346 RLMKQITNFMSDIADEFKIVVVEAIRSLCLKFPLKYRSLMNFLSNILREEGGFEYKKAIV 405
RLMKQI++FMS+I+DEFK+VVV+AI +LC K+P K+ LMNFL +LREEGGFEYK+AIV
Sbjct: 359 RLMKQISSFMSEISDEFKVVVVQAISALCQKYPRKHAVLMNFLFTMLREEGGFEYKRAIV 418
Query: 406 DSIVILIRDIPDAKENGLLHLCEFIEDCEFTYLSTQILHFLGTEGPKTSDPSKYIRYIYN 465
D I+ +I + ++KE GL HLCEFIEDCEFT L+T+ILH LG EGPKT++PSKYIR+IYN
Sbjct: 419 DCIISIIEENSESKETGLSHLCEFIEDCEFTVLATRILHLLGQEGPKTTNPSKYIRFIYN 478
Query: 466 RVHLENATVRAAAVSTLAKFGAMVDALKPRVFVLLRRCLYDGDDEEPAEQPFDINSVPKE 525
RV LE+ VRA AVS LAKFGA + + P + VLL+RC+ D D+E F +N + ++
Sbjct: 479 RVVLEHEEVRAGAVSALAKFGAQNEEMLPSILVLLKRCVMDDDNEVRDRATFYLNVLEQK 538
Query: 526 VK 527
K
Sbjct: 539 QK 540
Score = 542 (195.9 bits), Expect = 2.9e-207, Sum P(2) = 2.9e-207
Identities = 120/308 (38%), Positives = 174/308 (56%)
Query: 511 EPAEQPFDINSVPKEVKTQPLAEKKAPGKMXXXXXXXXXXXXXTVDAYEKLLSSIPEFSD 570
EP+E+PFD+ SVP + T P+AE++ + +++ L+++PEF
Sbjct: 568 EPSEKPFDLKSVP--LATAPMAEQRTESTPITAVKQPEKVAATRQEIFQEQLAAVPEFRG 625
Query: 571 FGKLFKSSA-PVELTEAETEYAVNVVKHIFDRHVVFQYNCTNTIPEQLLENVTVIVDXXX 629
G LFKSS PV LTE+ETEY + KH F H+VFQ++CTNT+ +Q LENVTV ++
Sbjct: 626 LGPLFKSSPEPVALTESETEYVIRCTKHTFTNHMVFQFDCTNTLNDQTLENVTVQMEPTE 685
Query: 630 XXXXXXXXXKPLRSLPYDSPGQIFGAFEKPEGVP-AVG-KFSNMLRFIVKEVDPTTXXXX 687
P RSLPY+ PG + P+ P AV FS M++F VK+ DPTT
Sbjct: 686 AYEVLCYV--PARSLPYNQPGTCYTLVALPKEDPTAVACTFSCMMKFTVKDCDPTTGETD 743
Query: 688 XXXXXXXYQLEDLEVVAADYVMKVGVSNFRNAWESIGPDFERVDEYGLGPRESLAEAVSA 747
Y LEDLEV AD++ KV NF AW+ +G +FE+ + + L ++L EAV
Sbjct: 744 DEGYEDEYVLEDLEVTVADHIQKVMKLNFEAAWDEVGDEFEKEETFTLSTIKTLEEAVGN 803
Query: 748 VISLLGMQPCEGTEVVANNSRSHTCLLSGVFIGNVKVLVRLQFGIDGPKEVAMKLAVRSE 807
++ LGM PCE ++ V +N +HT LL+GVF G +LVR + + V M++ RS
Sbjct: 804 IVKFLGMHPCERSDKVPDNKNTHTLLLAGVFRGGHDILVRSRLLL--LDTVTMQVTARSL 861
Query: 808 DDNVSDMI 815
++ D+I
Sbjct: 862 EELPVDII 869
>UNIPROTKB|P53620 [details] [associations]
symbol:COPG1 "Coatomer subunit gamma-1" species:9913 "Bos
taurus" [GO:0006890 "retrograde vesicle-mediated transport, Golgi
to ER" evidence=TAS] [GO:0006891 "intra-Golgi vesicle-mediated
transport" evidence=TAS] [GO:0030126 "COPI vesicle coat"
evidence=IDA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR002553
InterPro:IPR009028 InterPro:IPR013040 InterPro:IPR014863
InterPro:IPR015873 InterPro:IPR016024 Pfam:PF01602 Pfam:PF08752
InterPro:IPR013041 GO:GO:0005634 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 PROSITE:PS50077 GO:GO:0005198
GO:GO:0006891 SUPFAM:SSF55711 SUPFAM:SSF49348 Gene3D:3.30.310.30
GO:GO:0030126 GO:GO:0006890 PDB:3TJZ PDBsum:3TJZ EMBL:X92987
EMBL:BC111322 EMBL:X70019 IPI:IPI00717350 PIR:S33957
RefSeq:NP_001032904.1 UniGene:Bt.65158 PDB:1PZD PDBsum:1PZD
ProteinModelPortal:P53620 SMR:P53620 DIP:DIP-739N STRING:P53620
Ensembl:ENSBTAT00000017588 GeneID:338055 KEGG:bta:338055 CTD:22820
eggNOG:COG5240 GeneTree:ENSGT00390000016313 HOGENOM:HOG000184434
HOVERGEN:HBG004368 InParanoid:P53620 OrthoDB:EOG4DZ1TM
EvolutionaryTrace:P53620 NextBio:20812506 Gene3D:2.60.40.1480
InterPro:IPR017106 PANTHER:PTHR10261 PIRSF:PIRSF037093
Uniprot:P53620
Length = 874
Score = 1486 (528.2 bits), Expect = 6.1e-207, Sum P(2) = 6.1e-207
Identities = 300/542 (55%), Positives = 397/542 (73%)
Query: 5 LVKKDDDRDDEAE--YSPFLGIEKGAVLQEARVFNDPQLDPRRCSQVITKLLYLLNQGET 62
++KK D +D+E+ +PF +EK AVLQEARVFN+ ++PR+C+ ++TK+LYL+NQGE
Sbjct: 1 MLKKFDKKDEESGGGSNPFQHLEKSAVLQEARVFNETPINPRKCAHILTKILYLINQGEH 60
Query: 63 FTKIEATEVFFAVTKLFQSRDIGLRRMVYLMIKELSPSADEVIIVTSSLMKDMTSKTDMY 122
EATE FFA+TKLFQS D LRRM YL IKE+S A++VIIVTSSL KDMT K D Y
Sbjct: 61 LGTTEATEAFFAMTKLFQSNDPTLRRMCYLTIKEMSCIAEDVIIVTSSLTKDMTGKEDSY 120
Query: 123 RANAIRVLCRITDGTLLTQIERYLKQAIVDKNPVVASAALVSGIHLLQTTPEIVKRWSNE 182
R A+R LC+ITD T+L IERY+KQAIVDK P V+S+ALVS +HLL+ + ++VKRW NE
Sbjct: 121 RGPAVRALCQITDSTMLQAIERYMKQAIVDKVPSVSSSALVSSLHLLKCSFDVVKRWVNE 180
Query: 183 VQEAVQSRAALVQFHALALLHQIRQNDRLAVSKLVTSLTRGTVRSPLAQCLLIRYTTQVI 242
QEA S +VQ+HAL LL+ +R+NDRLAVSK+++ TR ++SP A C++IR ++ +
Sbjct: 181 AQEAASSDNIMVQYHALGLLYHVRKNDRLAVSKMISKFTRHGLKSPFAYCMMIRVASRQL 240
Query: 243 REAATTQTGDRPFYDFLESCLRHKAEMVIFEAARAITELNGVTNRELTPAITVLQLFLSS 302
+ ++ D P +DF+ESCLR+K EMV++EAA AI L G + +EL PA++VLQLF SS
Sbjct: 241 EDEDGSR--DSPLFDFIESCLRNKHEMVVYEAASAIVNLPGCSAKELAPAVSVLQLFCSS 298
Query: 303 SKPVLRFAAVRTLNK-----------------SLISDQNRSXXXXXXXXXXKTGNESSVD 345
K LR+AAVRTLNK +L++D NRS KTG+E S+D
Sbjct: 299 PKAALRYAAVRTLNKVAMKHPSAVTACNLDLENLVTDANRSIATLAITTLLKTGSEGSID 358
Query: 346 RLMKQITNFMSDIADEFKIVVVEAIRSLCLKFPLKYRSLMNFLSNILREEGGFEYKKAIV 405
RLMKQI++FMS+I+DEFK+VVV+AI +LC K+P K+ LMNFL ++LREEGGFEYK+AIV
Sbjct: 359 RLMKQISSFMSEISDEFKVVVVQAISALCQKYPRKHAVLMNFLFSMLREEGGFEYKRAIV 418
Query: 406 DSIVILIRDIPDAKENGLLHLCEFIEDCEFTYLSTQILHFLGTEGPKTSDPSKYIRYIYN 465
D I+ +I + ++KE GL HLCEFIEDCEFT L+T+ILH LG EGP+TS+PSKYIR+IYN
Sbjct: 419 DCIISIIEENAESKETGLSHLCEFIEDCEFTVLATRILHLLGQEGPRTSNPSKYIRFIYN 478
Query: 466 RVHLENATVRAAAVSTLAKFGAMVDALKPRVFVLLRRCLYDGDDEEPAEQPFDINSVPKE 525
RV LE+A VRA AVS LAKFGA + + P + VLL+RC+ D D+E F +N + ++
Sbjct: 479 RVVLEHAEVRAGAVSALAKFGAQNEEMLPSILVLLKRCVMDDDNEVRDRATFYLNVLEQK 538
Query: 526 VK 527
K
Sbjct: 539 QK 540
Score = 538 (194.4 bits), Expect = 6.1e-207, Sum P(2) = 6.1e-207
Identities = 118/308 (38%), Positives = 174/308 (56%)
Query: 511 EPAEQPFDINSVPKEVKTQPLAEKKAPGKMXXXXXXXXXXXXXTVDAYEKLLSSIPEFSD 570
EP+E+PFD+ SVP + T PLAE++ + +++ L+++PEF
Sbjct: 568 EPSEKPFDLKSVP--LATAPLAEQRTESTPVTAAKQPEKVAATRQEIFQEQLAAVPEFQG 625
Query: 571 FGKLFKSSA-PVELTEAETEYAVNVVKHIFDRHVVFQYNCTNTIPEQLLENVTVIVDXXX 629
G LFKSS PV LTE+ETEY + KH F H+VFQ++CTNT+ +Q LENVTV ++
Sbjct: 626 LGPLFKSSPEPVALTESETEYVIRCTKHTFTDHMVFQFDCTNTLNDQTLENVTVQMEPSE 685
Query: 630 XXXXXXXXXKPLRSLPYDSPGQIFGAFEKPEGVP-AVG-KFSNMLRFIVKEVDPTTXXXX 687
P RSLPY+ PG + P+ P AV FS +++F VK+ DPTT
Sbjct: 686 AYEVLCYV--PARSLPYNQPGTCYTLVALPKEDPTAVACTFSCVMKFTVKDCDPTTGEAD 743
Query: 688 XXXXXXXYQLEDLEVVAADYVMKVGVSNFRNAWESIGPDFERVDEYGLGPRESLAEAVSA 747
Y LEDLEV AD++ KV NF AW+ +G +F++ + + L ++L EAV
Sbjct: 744 DEGYEDEYVLEDLEVTIADHIQKVMKLNFEAAWDEVGDEFQKEETFTLSTIKTLEEAVGN 803
Query: 748 VISLLGMQPCEGTEVVANNSRSHTCLLSGVFIGNVKVLVRLQFGIDGPKEVAMKLAVRSE 807
++ LGM PCE ++ V +N +HT LL+GVF G +LVR + + V M++ RS
Sbjct: 804 IVKFLGMHPCERSDKVPDNKNTHTLLLAGVFRGGHDILVRSRLLL--LDTVTMQVTARSS 861
Query: 808 DDNVSDMI 815
++ D++
Sbjct: 862 EELPVDIV 869
>UNIPROTKB|F1NB52 [details] [associations]
symbol:COPG "Coatomer subunit gamma" species:9031 "Gallus
gallus" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR002553 InterPro:IPR009028
InterPro:IPR013040 InterPro:IPR014863 InterPro:IPR015873
InterPro:IPR016024 Pfam:PF01602 Pfam:PF08752 InterPro:IPR013041
GO:GO:0005634 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0016192 GO:GO:0005198 SUPFAM:SSF55711
SUPFAM:SSF49348 Gene3D:3.30.310.30 GO:GO:0030126
GeneTree:ENSGT00390000016313 Gene3D:2.60.40.1480 InterPro:IPR017106
PANTHER:PTHR10261 PIRSF:PIRSF037093 OMA:WDEVGEE EMBL:AADN02014051
EMBL:AADN02014052 IPI:IPI00571269 PRIDE:F1NB52
Ensembl:ENSGALT00000009434 Uniprot:F1NB52
Length = 874
Score = 1497 (532.0 bits), Expect = 2.6e-206, Sum P(2) = 2.6e-206
Identities = 302/542 (55%), Positives = 399/542 (73%)
Query: 5 LVKKDDDRDDEAE--YSPFLGIEKGAVLQEARVFNDPQLDPRRCSQVITKLLYLLNQGET 62
++KK D +D+E+ +PF +EK AVLQEARVFN+ ++PR+C+ ++TK+LYL+NQGE
Sbjct: 1 MLKKFDKKDEESGGGSNPFQHLEKSAVLQEARVFNETPINPRKCAHILTKILYLINQGEH 60
Query: 63 FTKIEATEVFFAVTKLFQSRDIGLRRMVYLMIKELSPSADEVIIVTSSLMKDMTSKTDMY 122
+EATE FFA+TKLFQS D LRRM YL IKE+S A++VIIVTSSL KDMT K D Y
Sbjct: 61 LGVMEATESFFAMTKLFQSNDPTLRRMCYLTIKEMSSIAEDVIIVTSSLTKDMTGKDDNY 120
Query: 123 RANAIRVLCRITDGTLLTQIERYLKQAIVDKNPVVASAALVSGIHLLQTTPEIVKRWSNE 182
R A+R LC+ITD T+L IERY+KQAIVDK P V+S+ALVS +HLL+T+ ++VKRW NE
Sbjct: 121 RGPAVRALCQITDSTMLQAIERYMKQAIVDKVPSVSSSALVSSLHLLKTSFDVVKRWVNE 180
Query: 183 VQEAVQSRAALVQFHALALLHQIRQNDRLAVSKLVTSLTRGTVRSPLAQCLLIRYTTQVI 242
QEA S +VQ+HAL LL+ +R+NDRLAV+K+++ TR ++SP A C++IR ++++
Sbjct: 181 AQEAASSDNIMVQYHALGLLYHVRKNDRLAVNKMLSKFTRHGLKSPFAYCMMIRVASKLL 240
Query: 243 REAATTQTGDRPFYDFLESCLRHKAEMVIFEAARAITELNGVTNRELTPAITVLQLFLSS 302
E A ++ D P +DF+ESCLR+K EMV++EAA AI L T +EL PA++VLQLF SS
Sbjct: 241 EEEAGSR--DSPLFDFIESCLRNKHEMVVYEAASAIVNLPNCTAKELAPAVSVLQLFCSS 298
Query: 303 SKPVLRFAAVRTLNK-----------------SLISDQNRSXXXXXXXXXXKTGNESSVD 345
K LR+AAVRTLNK +L++D NRS KTG+ESS+D
Sbjct: 299 PKAALRYAAVRTLNKVAMKHPSAVTACNLDLENLVTDSNRSIATLAITTLLKTGSESSID 358
Query: 346 RLMKQITNFMSDIADEFKIVVVEAIRSLCLKFPLKYRSLMNFLSNILREEGGFEYKKAIV 405
RLMKQI++FMS+I+DEFK+VVV+AI +LC K+P K+ LMNFL +LREEGGFEYK+AIV
Sbjct: 359 RLMKQISSFMSEISDEFKVVVVQAINALCQKYPRKHAVLMNFLFTMLREEGGFEYKRAIV 418
Query: 406 DSIVILIRDIPDAKENGLLHLCEFIEDCEFTYLSTQILHFLGTEGPKTSDPSKYIRYIYN 465
D I+ +I + ++KE GL HLCEFIEDCEFT L+T+ILH LG EGPKT++PSKYIR+IYN
Sbjct: 419 DCIISIIEENSESKETGLSHLCEFIEDCEFTVLATRILHLLGQEGPKTNNPSKYIRFIYN 478
Query: 466 RVHLENATVRAAAVSTLAKFGAMVDALKPRVFVLLRRCLYDGDDEEPAEQPFDINSVPKE 525
RV LE+ VRA AVS LAKFGA + + P + VLL+RC+ D D+E F +N + ++
Sbjct: 479 RVVLEHEEVRAGAVSALAKFGAQNEEMLPSILVLLKRCVMDDDNEVRDRATFYLNVLEQK 538
Query: 526 VK 527
K
Sbjct: 539 QK 540
Score = 521 (188.5 bits), Expect = 2.6e-206, Sum P(2) = 2.6e-206
Identities = 119/308 (38%), Positives = 171/308 (55%)
Query: 511 EPAEQPFDINSVPKEVKTQPLAEKKAPGKMXXXXXXXXXXXXXTVDAYEKLLSSIPEFSD 570
EP+E+PFD+ SVP + T P+ E++A + +++ L +IPEF
Sbjct: 568 EPSEKPFDLKSVP--LATAPIIEQRAENAPVAVAKQPEKVAATRQEIFQEQLGAIPEFRG 625
Query: 571 FGKLFKSSA-PVELTEAETEYAVNVVKHIFDRHVVFQYNCTNTIPEQLLENVTVIVDXXX 629
G LFKSS PV LTE ETEY V KH F H+VFQ++CTNT+ +Q+LENVTV ++
Sbjct: 626 LGPLFKSSPEPVALTELETEYVVRCTKHTFVSHMVFQFDCTNTLNDQILENVTVQMEPTE 685
Query: 630 XXXXXXXXXKPLRSLPYDSPGQIFGAFEKPEGVP-AVG-KFSNMLRFIVKEVDPTTXXXX 687
P +SL Y+ PG + E P AV FS M++F VK+ DP T
Sbjct: 686 GYEVIGYI--PAKSLVYNQPGTCYTLVALSEEDPTAVACTFSCMMKFTVKDCDPNTGETD 743
Query: 688 XXXXXXXYQLEDLEVVAADYVMKVGVSNFRNAWESIGPDFERVDEYGLGPRESLAEAVSA 747
Y LEDLEV AD++ +V NF AW+ +G ++E+ + + L ++L EAVS
Sbjct: 744 DEGYEDEYVLEDLEVTVADHIQRVLKPNFGAAWDEVGDEYEKEETFTLSAIKTLEEAVSN 803
Query: 748 VISLLGMQPCEGTEVVANNSRSHTCLLSGVFIGNVKVLVRLQFGIDGPKEVAMKLAVRSE 807
++ LGMQPCE ++ V +N SHT L+GVF G VL+R + + V M++ RS
Sbjct: 804 IVKFLGMQPCERSDKVPDNKNSHTLYLAGVFRGGHDVLLRARLLLTDT--VTMQVTARSA 861
Query: 808 DDNVSDMI 815
++ D+I
Sbjct: 862 EELPVDVI 869
>MGI|MGI:1858696 [details] [associations]
symbol:Copg1 "coatomer protein complex, subunit gamma 1"
species:10090 "Mus musculus" [GO:0000139 "Golgi membrane"
evidence=ISO] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005798 "Golgi-associated
vesicle" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030126
"COPI vesicle coat" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] [GO:0051683 "establishment of Golgi localization"
evidence=ISO] [GO:0072384 "organelle transport along microtubule"
evidence=ISO] InterPro:IPR002553 InterPro:IPR009028
InterPro:IPR013040 InterPro:IPR014863 InterPro:IPR015873
InterPro:IPR016024 Pfam:PF01602 Pfam:PF08752 InterPro:IPR013041
MGI:MGI:1858696 GO:GO:0005634 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 PROSITE:PS50077 GO:GO:0016192
GO:GO:0005198 SUPFAM:SSF55711 SUPFAM:SSF49348 Gene3D:3.30.310.30
GO:GO:0030126 eggNOG:COG5240 GeneTree:ENSGT00390000016313
HOGENOM:HOG000184434 HOVERGEN:HBG004368 OrthoDB:EOG4DZ1TM
Gene3D:2.60.40.1480 InterPro:IPR017106 PANTHER:PTHR10261
PIRSF:PIRSF037093 OMA:WDEVGEE ChiTaRS:COPG1 EMBL:AF187079
EMBL:AK049417 EMBL:AK077461 EMBL:AK147895 EMBL:AK151284
EMBL:AK151816 EMBL:AK153142 EMBL:AK164280 EMBL:AK169256
EMBL:AK171950 EMBL:AK172519 EMBL:BC008553 EMBL:BC024686
EMBL:BC024896 IPI:IPI00223437 RefSeq:NP_059505.1 UniGene:Mm.258785
HSSP:P53620 ProteinModelPortal:Q9QZE5 SMR:Q9QZE5 STRING:Q9QZE5
PhosphoSite:Q9QZE5 PaxDb:Q9QZE5 PRIDE:Q9QZE5
Ensembl:ENSMUST00000113607 GeneID:54161 KEGG:mmu:54161
UCSC:uc009cug.1 CTD:54161 InParanoid:Q922C6 NextBio:311004
Bgee:Q9QZE5 CleanEx:MM_COPG Genevestigator:Q9QZE5 Uniprot:Q9QZE5
Length = 874
Score = 1480 (526.0 bits), Expect = 5.4e-206, Sum P(2) = 5.4e-206
Identities = 299/542 (55%), Positives = 395/542 (72%)
Query: 5 LVKKDDDRDDEAE--YSPFLGIEKGAVLQEARVFNDPQLDPRRCSQVITKLLYLLNQGET 62
++KK D +D+E+ +P +EK AVLQEARVFN+ ++PR+C+ ++TK+LYL+NQGE
Sbjct: 1 MLKKFDKKDEESGGGSNPLQHLEKSAVLQEARVFNETPINPRKCAHILTKILYLINQGEH 60
Query: 63 FTKIEATEVFFAVTKLFQSRDIGLRRMVYLMIKELSPSADEVIIVTSSLMKDMTSKTDMY 122
EATE FFA+TKLFQS D LRRM YL IKE+S A++VIIVTSSL KDMT K D Y
Sbjct: 61 LGTTEATEAFFAMTKLFQSNDPTLRRMCYLTIKEMSCIAEDVIIVTSSLTKDMTGKEDNY 120
Query: 123 RANAIRVLCRITDGTLLTQIERYLKQAIVDKNPVVASAALVSGIHLLQTTPEIVKRWSNE 182
R A+R LC+ITD T+L +ERY+KQAIVDK P V+S+ALVS +HLL+ + ++VKRW NE
Sbjct: 121 RGPAVRALCQITDSTMLQAVERYMKQAIVDKVPSVSSSALVSSLHLLKCSFDVVKRWVNE 180
Query: 183 VQEAVQSRAALVQFHALALLHQIRQNDRLAVSKLVTSLTRGTVRSPLAQCLLIRYTTQVI 242
QEA S +VQ+HAL LL+ +R+NDRLAVSK+++ TR ++SP A C++IR ++ +
Sbjct: 181 AQEAASSDNIMVQYHALGLLYHVRKNDRLAVSKMISKFTRHGLKSPFAYCMMIRVASKQL 240
Query: 243 REAATTQTGDRPFYDFLESCLRHKAEMVIFEAARAITELNGVTNRELTPAITVLQLFLSS 302
E ++ D P +DF+ESCLR+K EMV++EAA AI L G + +EL PA++VLQLF SS
Sbjct: 241 EEEDGSR--DSPLFDFIESCLRNKHEMVVYEAASAIVNLPGCSAKELAPAVSVLQLFCSS 298
Query: 303 SKPVLRFAAVRTLNK-----------------SLISDQNRSXXXXXXXXXXKTGNESSVD 345
K LR+AAVRTLNK +L++D NRS KTG+ESS+D
Sbjct: 299 PKAALRYAAVRTLNKVAMKHPSAVTACNLDLENLVTDSNRSIATLAITTLLKTGSESSID 358
Query: 346 RLMKQITNFMSDIADEFKIVVVEAIRSLCLKFPLKYRSLMNFLSNILREEGGFEYKKAIV 405
RLMKQI++FMS+I+DEFK+VVV+AI +LC K+P K+ LMNFL +LREEGGFEYK+AIV
Sbjct: 359 RLMKQISSFMSEISDEFKVVVVQAISALCQKYPRKHAVLMNFLFTMLREEGGFEYKRAIV 418
Query: 406 DSIVILIRDIPDAKENGLLHLCEFIEDCEFTYLSTQILHFLGTEGPKTSDPSKYIRYIYN 465
D I+ +I + ++KE GL HLCEFIEDCEFT L+T+ILH LG EGPKT++PSKYIR+IYN
Sbjct: 419 DCIISIIEENSESKETGLSHLCEFIEDCEFTVLATRILHLLGQEGPKTNNPSKYIRFIYN 478
Query: 466 RVHLENATVRAAAVSTLAKFGAMVDALKPRVFVLLRRCLYDGDDEEPAEQPFDINSVPKE 525
RV LE+ VRA AVS LAKFGA + + P + VLL+RC+ D D+E F +N + ++
Sbjct: 479 RVVLEHEEVRAGAVSALAKFGAQNEEMLPSILVLLKRCVMDDDNEVRDRATFYLNVLEQK 538
Query: 526 VK 527
K
Sbjct: 539 QK 540
Score = 535 (193.4 bits), Expect = 5.4e-206, Sum P(2) = 5.4e-206
Identities = 118/308 (38%), Positives = 171/308 (55%)
Query: 511 EPAEQPFDINSVPKEVKTQPLAEKKAPGKMXXXXXXXXXXXXXTVDAYEKLLSSIPEFSD 570
EP+E+PFD+ SVP + T P+AE++ + +++ L+++PEF
Sbjct: 568 EPSEKPFDLKSVP--LATTPMAEQRPESTATAAVKQPEKVAATRQEIFQEQLAAVPEFQG 625
Query: 571 FGKLFKSSA-PVELTEAETEYAVNVVKHIFDRHVVFQYNCTNTIPEQLLENVTVIVDXXX 629
G LFKSS PV LTE+ETEY + KH F H+VFQ++CTNT+ +Q LENVTV ++
Sbjct: 626 LGPLFKSSPEPVALTESETEYVIRCTKHTFSDHLVFQFDCTNTLNDQTLENVTVQMEPTE 685
Query: 630 XXXXXXXXXKPLRSLPYDSPGQIFGAFEKPEGVP-AVG-KFSNMLRFIVKEVDPTTXXXX 687
P RSLPY+ PG + P P AV FS +++F VK+ DP T
Sbjct: 686 AYEVLSYV--PARSLPYNQPGTCYTLVALPTEDPTAVACTFSCVMKFTVKDCDPNTGEID 743
Query: 688 XXXXXXXYQLEDLEVVAADYVMKVGVSNFRNAWESIGPDFERVDEYGLGPRESLAEAVSA 747
Y LEDLEV AD++ KV NF AW+ +G +FE+ + + L ++L EAV
Sbjct: 744 EEGYEDEYVLEDLEVTVADHIQKVMKVNFEAAWDEVGDEFEKEETFTLSTIKTLEEAVGN 803
Query: 748 VISLLGMQPCEGTEVVANNSRSHTCLLSGVFIGNVKVLVRLQFGIDGPKEVAMKLAVRSE 807
++ LGM PCE ++ V N +HT LL+GVF G +LVR + + V M++ RS
Sbjct: 804 IVKFLGMHPCERSDKVPENKNTHTLLLAGVFRGGHDILVRSRLLL--LDTVTMQVTARSS 861
Query: 808 DDNVSDMI 815
++ D+I
Sbjct: 862 EELPVDII 869
>RGD|1565292 [details] [associations]
symbol:Copg1 "coatomer protein complex, subunit gamma 1"
species:10116 "Rattus norvegicus" [GO:0000139 "Golgi membrane"
evidence=IDA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005794 "Golgi apparatus"
evidence=ISO] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0051683 "establishment of Golgi localization" evidence=IMP]
[GO:0072384 "organelle transport along microtubule" evidence=IMP]
InterPro:IPR002553 InterPro:IPR009028 InterPro:IPR013040
InterPro:IPR014863 InterPro:IPR015873 InterPro:IPR016024
Pfam:PF01602 Pfam:PF08752 InterPro:IPR013041 RGD:1565292
GO:GO:0005634 GO:GO:0006886 GO:GO:0000139 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 PROSITE:PS50077 GO:GO:0016192
GO:GO:0005198 SUPFAM:SSF55711 SUPFAM:SSF49348 Gene3D:3.30.310.30
GO:GO:0030126 GO:GO:0051683 GO:GO:0072384 CTD:22820 eggNOG:COG5240
GeneTree:ENSGT00390000016313 HOGENOM:HOG000184434
HOVERGEN:HBG004368 Gene3D:2.60.40.1480 InterPro:IPR017106
PANTHER:PTHR10261 PIRSF:PIRSF037093 EMBL:AB158425 EMBL:AB158426
EMBL:BC129074 IPI:IPI00364504 RefSeq:NP_001026992.1
UniGene:Rn.50150 ProteinModelPortal:Q4AEF8 SMR:Q4AEF8 IntAct:Q4AEF8
STRING:Q4AEF8 PRIDE:Q4AEF8 Ensembl:ENSRNOT00000016137 GeneID:297428
KEGG:rno:297428 InParanoid:Q4AEF8 NextBio:642245
ArrayExpress:Q4AEF8 Genevestigator:Q4AEF8 Uniprot:Q4AEF8
Length = 874
Score = 1480 (526.0 bits), Expect = 5.4e-206, Sum P(2) = 5.4e-206
Identities = 299/542 (55%), Positives = 395/542 (72%)
Query: 5 LVKKDDDRDDEAE--YSPFLGIEKGAVLQEARVFNDPQLDPRRCSQVITKLLYLLNQGET 62
++KK D +D+E+ +P +EK AVLQEARVFN+ ++PR+C+ ++TK+LYL+NQGE
Sbjct: 1 MLKKFDKKDEESGGGSNPLQHLEKSAVLQEARVFNETPINPRKCAHILTKILYLINQGEH 60
Query: 63 FTKIEATEVFFAVTKLFQSRDIGLRRMVYLMIKELSPSADEVIIVTSSLMKDMTSKTDMY 122
EATE FFA+TKLFQS D LRRM YL IKE+S A++VIIVTSSL KDMT K D Y
Sbjct: 61 LGTTEATEAFFAMTKLFQSNDPTLRRMCYLTIKEMSCIAEDVIIVTSSLTKDMTGKEDNY 120
Query: 123 RANAIRVLCRITDGTLLTQIERYLKQAIVDKNPVVASAALVSGIHLLQTTPEIVKRWSNE 182
R A+R LC+ITD T+L +ERY+KQAIVDK P V+S+ALVS +HLL+ + ++VKRW NE
Sbjct: 121 RGPAVRALCQITDSTMLQAVERYMKQAIVDKVPSVSSSALVSSLHLLKCSFDVVKRWVNE 180
Query: 183 VQEAVQSRAALVQFHALALLHQIRQNDRLAVSKLVTSLTRGTVRSPLAQCLLIRYTTQVI 242
QEA S +VQ+HAL LL+ +R+NDRLAVSK+++ TR ++SP A C++IR ++ +
Sbjct: 181 AQEAASSDNIMVQYHALGLLYHVRKNDRLAVSKMISKFTRHGLKSPFAYCMMIRVASKQL 240
Query: 243 REAATTQTGDRPFYDFLESCLRHKAEMVIFEAARAITELNGVTNRELTPAITVLQLFLSS 302
E ++ D P +DF+ESCLR+K EMV++EAA AI L G + +EL PA++VLQLF SS
Sbjct: 241 EEEDGSR--DSPLFDFIESCLRNKHEMVVYEAASAIVNLPGCSAKELAPAVSVLQLFCSS 298
Query: 303 SKPVLRFAAVRTLNK-----------------SLISDQNRSXXXXXXXXXXKTGNESSVD 345
K LR+AAVRTLNK +L++D NRS KTG+ESS+D
Sbjct: 299 PKAALRYAAVRTLNKVAMKHPSAVTACNLDLENLVTDSNRSIATLAITTLLKTGSESSID 358
Query: 346 RLMKQITNFMSDIADEFKIVVVEAIRSLCLKFPLKYRSLMNFLSNILREEGGFEYKKAIV 405
RLMKQI++FMS+I+DEFK+VVV+AI +LC K+P K+ LMNFL +LREEGGFEYK+AIV
Sbjct: 359 RLMKQISSFMSEISDEFKVVVVQAISALCQKYPRKHAVLMNFLFTMLREEGGFEYKRAIV 418
Query: 406 DSIVILIRDIPDAKENGLLHLCEFIEDCEFTYLSTQILHFLGTEGPKTSDPSKYIRYIYN 465
D I+ +I + ++KE GL HLCEFIEDCEFT L+T+ILH LG EGPKT++PSKYIR+IYN
Sbjct: 419 DCIISIIEENSESKETGLSHLCEFIEDCEFTVLATRILHLLGQEGPKTNNPSKYIRFIYN 478
Query: 466 RVHLENATVRAAAVSTLAKFGAMVDALKPRVFVLLRRCLYDGDDEEPAEQPFDINSVPKE 525
RV LE+ VRA AVS LAKFGA + + P + VLL+RC+ D D+E F +N + ++
Sbjct: 479 RVVLEHEEVRAGAVSALAKFGAQNEEMLPSILVLLKRCVMDDDNEVRDRATFYLNVLEQK 538
Query: 526 VK 527
K
Sbjct: 539 QK 540
Score = 535 (193.4 bits), Expect = 5.4e-206, Sum P(2) = 5.4e-206
Identities = 117/308 (37%), Positives = 172/308 (55%)
Query: 511 EPAEQPFDINSVPKEVKTQPLAEKKAPGKMXXXXXXXXXXXXXTVDAYEKLLSSIPEFSD 570
EP+E+PFD+ SVP + T P+ E++ + +++ L+++PEF
Sbjct: 568 EPSEKPFDLKSVP--LATTPMTEQRPESTSTAAVKQPEKVAATRQEIFQEQLAAVPEFQG 625
Query: 571 FGKLFKSSA-PVELTEAETEYAVNVVKHIFDRHVVFQYNCTNTIPEQLLENVTVIVDXXX 629
G LFKSS PV LTE+ETEY + KH F H+VFQ++CTNT+ +Q LENVTV ++
Sbjct: 626 LGPLFKSSPEPVALTESETEYVIRCTKHTFSDHLVFQFDCTNTLNDQTLENVTVQMEPTE 685
Query: 630 XXXXXXXXXKPLRSLPYDSPGQIFGAFEKPEGVP-AVG-KFSNMLRFIVKEVDPTTXXXX 687
P+RSLPY+ PG + P+ P AV FS +++F VK+ DP T
Sbjct: 686 AYEVLSYV--PVRSLPYNQPGTCYTLVALPKEDPTAVACTFSCVMKFTVKDCDPNTGEID 743
Query: 688 XXXXXXXYQLEDLEVVAADYVMKVGVSNFRNAWESIGPDFERVDEYGLGPRESLAEAVSA 747
Y LEDLEV AD++ KV NF AW+ +G +FE+ + + L ++L EAV
Sbjct: 744 EEGYEDEYVLEDLEVTVADHIQKVMKVNFEAAWDEVGDEFEKEETFTLSTIKTLEEAVGN 803
Query: 748 VISLLGMQPCEGTEVVANNSRSHTCLLSGVFIGNVKVLVRLQFGIDGPKEVAMKLAVRSE 807
++ LGM PCE ++ V N +HT LL+GVF G +LVR + + V M++ RS
Sbjct: 804 IVKFLGMHPCERSDKVPENKNTHTLLLAGVFRGGHDILVRSRLLL--LDTVTMQVTARSS 861
Query: 808 DDNVSDMI 815
++ D+I
Sbjct: 862 EELPVDII 869
>UNIPROTKB|Q4AEF8 [details] [associations]
symbol:Copg1 "Coatomer subunit gamma-1" species:10116
"Rattus norvegicus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
InterPro:IPR002553 InterPro:IPR009028 InterPro:IPR013040
InterPro:IPR014863 InterPro:IPR015873 InterPro:IPR016024
Pfam:PF01602 Pfam:PF08752 InterPro:IPR013041 RGD:1565292
GO:GO:0005634 GO:GO:0006886 GO:GO:0000139 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 PROSITE:PS50077 GO:GO:0016192
GO:GO:0005198 SUPFAM:SSF55711 SUPFAM:SSF49348 Gene3D:3.30.310.30
GO:GO:0030126 GO:GO:0051683 GO:GO:0072384 CTD:22820 eggNOG:COG5240
GeneTree:ENSGT00390000016313 HOGENOM:HOG000184434
HOVERGEN:HBG004368 Gene3D:2.60.40.1480 InterPro:IPR017106
PANTHER:PTHR10261 PIRSF:PIRSF037093 EMBL:AB158425 EMBL:AB158426
EMBL:BC129074 IPI:IPI00364504 RefSeq:NP_001026992.1
UniGene:Rn.50150 ProteinModelPortal:Q4AEF8 SMR:Q4AEF8 IntAct:Q4AEF8
STRING:Q4AEF8 PRIDE:Q4AEF8 Ensembl:ENSRNOT00000016137 GeneID:297428
KEGG:rno:297428 InParanoid:Q4AEF8 NextBio:642245
ArrayExpress:Q4AEF8 Genevestigator:Q4AEF8 Uniprot:Q4AEF8
Length = 874
Score = 1480 (526.0 bits), Expect = 5.4e-206, Sum P(2) = 5.4e-206
Identities = 299/542 (55%), Positives = 395/542 (72%)
Query: 5 LVKKDDDRDDEAE--YSPFLGIEKGAVLQEARVFNDPQLDPRRCSQVITKLLYLLNQGET 62
++KK D +D+E+ +P +EK AVLQEARVFN+ ++PR+C+ ++TK+LYL+NQGE
Sbjct: 1 MLKKFDKKDEESGGGSNPLQHLEKSAVLQEARVFNETPINPRKCAHILTKILYLINQGEH 60
Query: 63 FTKIEATEVFFAVTKLFQSRDIGLRRMVYLMIKELSPSADEVIIVTSSLMKDMTSKTDMY 122
EATE FFA+TKLFQS D LRRM YL IKE+S A++VIIVTSSL KDMT K D Y
Sbjct: 61 LGTTEATEAFFAMTKLFQSNDPTLRRMCYLTIKEMSCIAEDVIIVTSSLTKDMTGKEDNY 120
Query: 123 RANAIRVLCRITDGTLLTQIERYLKQAIVDKNPVVASAALVSGIHLLQTTPEIVKRWSNE 182
R A+R LC+ITD T+L +ERY+KQAIVDK P V+S+ALVS +HLL+ + ++VKRW NE
Sbjct: 121 RGPAVRALCQITDSTMLQAVERYMKQAIVDKVPSVSSSALVSSLHLLKCSFDVVKRWVNE 180
Query: 183 VQEAVQSRAALVQFHALALLHQIRQNDRLAVSKLVTSLTRGTVRSPLAQCLLIRYTTQVI 242
QEA S +VQ+HAL LL+ +R+NDRLAVSK+++ TR ++SP A C++IR ++ +
Sbjct: 181 AQEAASSDNIMVQYHALGLLYHVRKNDRLAVSKMISKFTRHGLKSPFAYCMMIRVASKQL 240
Query: 243 REAATTQTGDRPFYDFLESCLRHKAEMVIFEAARAITELNGVTNRELTPAITVLQLFLSS 302
E ++ D P +DF+ESCLR+K EMV++EAA AI L G + +EL PA++VLQLF SS
Sbjct: 241 EEEDGSR--DSPLFDFIESCLRNKHEMVVYEAASAIVNLPGCSAKELAPAVSVLQLFCSS 298
Query: 303 SKPVLRFAAVRTLNK-----------------SLISDQNRSXXXXXXXXXXKTGNESSVD 345
K LR+AAVRTLNK +L++D NRS KTG+ESS+D
Sbjct: 299 PKAALRYAAVRTLNKVAMKHPSAVTACNLDLENLVTDSNRSIATLAITTLLKTGSESSID 358
Query: 346 RLMKQITNFMSDIADEFKIVVVEAIRSLCLKFPLKYRSLMNFLSNILREEGGFEYKKAIV 405
RLMKQI++FMS+I+DEFK+VVV+AI +LC K+P K+ LMNFL +LREEGGFEYK+AIV
Sbjct: 359 RLMKQISSFMSEISDEFKVVVVQAISALCQKYPRKHAVLMNFLFTMLREEGGFEYKRAIV 418
Query: 406 DSIVILIRDIPDAKENGLLHLCEFIEDCEFTYLSTQILHFLGTEGPKTSDPSKYIRYIYN 465
D I+ +I + ++KE GL HLCEFIEDCEFT L+T+ILH LG EGPKT++PSKYIR+IYN
Sbjct: 419 DCIISIIEENSESKETGLSHLCEFIEDCEFTVLATRILHLLGQEGPKTNNPSKYIRFIYN 478
Query: 466 RVHLENATVRAAAVSTLAKFGAMVDALKPRVFVLLRRCLYDGDDEEPAEQPFDINSVPKE 525
RV LE+ VRA AVS LAKFGA + + P + VLL+RC+ D D+E F +N + ++
Sbjct: 479 RVVLEHEEVRAGAVSALAKFGAQNEEMLPSILVLLKRCVMDDDNEVRDRATFYLNVLEQK 538
Query: 526 VK 527
K
Sbjct: 539 QK 540
Score = 535 (193.4 bits), Expect = 5.4e-206, Sum P(2) = 5.4e-206
Identities = 117/308 (37%), Positives = 172/308 (55%)
Query: 511 EPAEQPFDINSVPKEVKTQPLAEKKAPGKMXXXXXXXXXXXXXTVDAYEKLLSSIPEFSD 570
EP+E+PFD+ SVP + T P+ E++ + +++ L+++PEF
Sbjct: 568 EPSEKPFDLKSVP--LATTPMTEQRPESTSTAAVKQPEKVAATRQEIFQEQLAAVPEFQG 625
Query: 571 FGKLFKSSA-PVELTEAETEYAVNVVKHIFDRHVVFQYNCTNTIPEQLLENVTVIVDXXX 629
G LFKSS PV LTE+ETEY + KH F H+VFQ++CTNT+ +Q LENVTV ++
Sbjct: 626 LGPLFKSSPEPVALTESETEYVIRCTKHTFSDHLVFQFDCTNTLNDQTLENVTVQMEPTE 685
Query: 630 XXXXXXXXXKPLRSLPYDSPGQIFGAFEKPEGVP-AVG-KFSNMLRFIVKEVDPTTXXXX 687
P+RSLPY+ PG + P+ P AV FS +++F VK+ DP T
Sbjct: 686 AYEVLSYV--PVRSLPYNQPGTCYTLVALPKEDPTAVACTFSCVMKFTVKDCDPNTGEID 743
Query: 688 XXXXXXXYQLEDLEVVAADYVMKVGVSNFRNAWESIGPDFERVDEYGLGPRESLAEAVSA 747
Y LEDLEV AD++ KV NF AW+ +G +FE+ + + L ++L EAV
Sbjct: 744 EEGYEDEYVLEDLEVTVADHIQKVMKVNFEAAWDEVGDEFEKEETFTLSTIKTLEEAVGN 803
Query: 748 VISLLGMQPCEGTEVVANNSRSHTCLLSGVFIGNVKVLVRLQFGIDGPKEVAMKLAVRSE 807
++ LGM PCE ++ V N +HT LL+GVF G +LVR + + V M++ RS
Sbjct: 804 IVKFLGMHPCERSDKVPENKNTHTLLLAGVFRGGHDILVRSRLLL--LDTVTMQVTARSS 861
Query: 808 DDNVSDMI 815
++ D+I
Sbjct: 862 EELPVDII 869
>UNIPROTKB|F1PHS7 [details] [associations]
symbol:COPG2 "Coatomer subunit gamma" species:9615 "Canis
lupus familiaris" [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0005198 "structural molecule activity" evidence=IEA]
InterPro:IPR002553 InterPro:IPR013040 InterPro:IPR014863
InterPro:IPR015873 InterPro:IPR016024 Pfam:PF01602 Pfam:PF08752
InterPro:IPR013041 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0016192 GO:GO:0005198 SUPFAM:SSF49348
Gene3D:3.30.310.30 GO:GO:0030126 GeneTree:ENSGT00390000016313
Gene3D:2.60.40.1480 InterPro:IPR017106 PANTHER:PTHR10261
PIRSF:PIRSF037093 OMA:SEEGHES EMBL:AAEX03009252 EMBL:AAEX03009250
EMBL:AAEX03009251 Ensembl:ENSCAFT00000002234 Uniprot:F1PHS7
Length = 1010
Score = 1478 (525.3 bits), Expect = 3.8e-205, Sum P(2) = 3.8e-205
Identities = 298/532 (56%), Positives = 389/532 (73%)
Query: 6 VKKDDDRDDEAEYSPFLGIEKGAVLQEARVFNDPQLDPRRCSQVITKLLYLLNQGETFTK 65
V K D R D + +PF +EK AVLQEAR+FN+ ++PRRC ++TK+LYLLNQGE F
Sbjct: 125 VCKRDMRKDGSGSNPFRHLEKSAVLQEARIFNETPINPRRCLHILTKILYLLNQGEHFGT 184
Query: 66 IEATEVFFAVTKLFQSRDIGLRRMVYLMIKELSPSADEVIIVTSSLMKDMTSKTDMYRAN 125
+EATE FFA+T+LFQS D LRRM YL IKE++ +++VIIVTSSL KDMT K D+YR
Sbjct: 185 MEATEAFFAMTRLFQSNDQTLRRMCYLTIKEMATISEDVIIVTSSLTKDMTGKEDVYRGP 244
Query: 126 AIRVLCRITDGTLLTQIERYLKQAIVDKNPVVASAALVSGIHLLQTTPEIVKRWSNEVQE 185
AIR LCRITDGT+L IERY+KQAIVDK V+S+ALVS +H+++ + ++VKRW NE QE
Sbjct: 245 AIRALCRITDGTMLQAIERYMKQAIVDKVSSVSSSALVSSLHMMKISHDVVKRWVNEAQE 304
Query: 186 AVQSRAALVQFHALALLHQIRQNDRLAVSKLVTSLTRGTVRSPLAQCLLIRYTTQVIREA 245
A S +VQ+HAL +L+ +++NDRLAVSK++ T+ +++S A C+LIR +++++E
Sbjct: 305 AASSDNIMVQYHALGVLYHLKKNDRLAVSKMLNKFTKSSLKSQFAYCMLIRIASRLLKE- 363
Query: 246 ATTQTGDRPFYDFLESCLRHKAEMVIFEAARAITELNGVTNRELTPAITVLQLFLSSSKP 305
+ + P +DF+ESCLR+K EMVI+EAA AI L T REL PA++VLQLF SS KP
Sbjct: 364 -NEEGHESPLFDFIESCLRNKHEMVIYEAASAIIHLPNCTARELAPAVSVLQLFCSSPKP 422
Query: 306 VLRFAAVRTLNK-----------------SLISDQNRSXXXXXXXXXXKTGNESSVDRLM 348
LR+AAVRTLNK +LI+D NRS KTG+ESSVDRLM
Sbjct: 423 ALRYAAVRTLNKVAMKHPSAVTACNLDLENLITDSNRSIATLAITTLLKTGSESSVDRLM 482
Query: 349 KQITNFMSDIADEFKIVVVEAIRSLCLKFPLKYRSLMNFLSNILREEGGFEYKKAIVDSI 408
KQI++F+S+I+DEFK+VVV+AI +LC K+P K+ +M FLSN+LR++GGFEYK+AIVD I
Sbjct: 483 KQISSFVSEISDEFKVVVVQAISALCQKYPRKHSVMMTFLSNMLRDDGGFEYKRAIVDCI 542
Query: 409 VILIRDIPDAKENGLLHLCEFIEDCEFTYLSTQILHFLGTEGPKTSDPSKYIRYIYNRVH 468
+ ++ + P+ KE GL HLCEFIEDCE T L+T+ILH LG EGP+T PSKYIR+I+NRV
Sbjct: 543 ISIVEENPEGKEAGLAHLCEFIEDCEHTVLATKILHLLGKEGPRTPVPSKYIRFIFNRVV 602
Query: 469 LENATVRAAAVSTLAKFGAMVDALKPRVFVLLRRCLYDGDDEEPAEQPFDIN 520
LEN VRAAAVS LAKFGA + L P + VLL+RC+ D DDE F +N
Sbjct: 603 LENEAVRAAAVSALAKFGAQNENLLPSILVLLQRCMMDTDDEVRDRATFYLN 654
Score = 529 (191.3 bits), Expect = 3.8e-205, Sum P(2) = 3.8e-205
Identities = 114/287 (39%), Positives = 164/287 (57%)
Query: 511 EPAEQPFDINSVPKEVKTQPLAEKKAPGKMXXXXXXXXXXXXXTVDAYEKLLSSIPEFSD 570
EP+E+PFD+ S+P + P+ E+KA ++ D +++ L++IPEF D
Sbjct: 689 EPSEKPFDMKSIP--LAMAPVFEQKA--EITLVATKPEKVAPSRQDIFQEQLAAIPEFMD 744
Query: 571 FGKLFKSSAPVELTEAETEYAVNVVKHIFDRHVVFQYNCTNTIPEQLLENVTVIVDXXXX 630
G LFKSS PV+LTEAETEY V +KH+F H+VFQ++CTNT+ +QLLE VTV V+
Sbjct: 745 LGPLFKSSEPVQLTEAETEYFVRCIKHMFTNHIVFQFDCTNTLNDQLLEKVTVQVEPSDS 804
Query: 631 XXXXXXXXKPLRSLPYDSPGQIFGAFEKPE--GVPAVGKFSNMLRFIVKEVDPTTXXXXX 688
P SL Y+ PG + P+ G FS ++F V++ DP T
Sbjct: 805 YEVLCCIPAP--SLSYNQPGICYTLVRLPDDDSTAVAGTFSCTMKFTVRDCDPDTGVPAE 862
Query: 689 XXXXXXYQLEDLEVVAADYVMKVGVSNFRNAWESIGPDFERVDEYGLGPRESLAEAVSAV 748
Y LEDLEV +D++ KV NF AWE +G FE+ + + L ++L EAV+ +
Sbjct: 863 EGYDDEYVLEDLEVTVSDHIQKVLKPNFAAAWEEVGDTFEKEETFALSSTKTLEEAVNNI 922
Query: 749 ISLLGMQPCEGTEVVANNSRSHTCLLSGVFIGNVKVLVRLQFGI-DG 794
I+ LGMQPCE ++ V N SH+ L+GV+ G +LVR + + DG
Sbjct: 923 ITFLGMQPCERSDKVPENKNSHSLYLAGVYRGGYDLLVRSRLALADG 969
>DICTYBASE|DDB_G0289371 [details] [associations]
symbol:copG "adaptin N-terminal domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0030126 "COPI
vesicle coat" evidence=IEA;ISS] [GO:0030117 "membrane coat"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0005798 "Golgi-associated vesicle" evidence=IEA]
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=ISS] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0030663
"COPI-coated vesicle membrane" evidence=IEA] [GO:0000139 "Golgi
membrane" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR002553 InterPro:IPR009028
InterPro:IPR013040 InterPro:IPR014863 InterPro:IPR015873
InterPro:IPR016024 Pfam:PF01602 Pfam:PF08752 InterPro:IPR013041
dictyBase:DDB_G0289371 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 PROSITE:PS50077 GO:GO:0005198
GenomeReviews:CM000154_GR EMBL:AAFI02000139 GO:GO:0006891
SUPFAM:SSF55711 SUPFAM:SSF49348 Gene3D:3.30.310.30 GO:GO:0030126
eggNOG:COG5240 Gene3D:2.60.40.1480 InterPro:IPR017106
PANTHER:PTHR10261 PIRSF:PIRSF037093 HSSP:P53620 RefSeq:XP_636291.1
ProteinModelPortal:Q54HL0 IntAct:Q54HL0 STRING:Q54HL0 PRIDE:Q54HL0
EnsemblProtists:DDB0233801 GeneID:8627109 KEGG:ddi:DDB_G0289371
OMA:EMSSISE ProtClustDB:CLSZ2429791 Uniprot:Q54HL0
Length = 898
Score = 1437 (510.9 bits), Expect = 1.5e-196, Sum P(3) = 1.5e-196
Identities = 290/527 (55%), Positives = 390/527 (74%)
Query: 1 MAQPLVKKDDDRDDEAEYSPFLGIEKGAVLQEARVFNDPQLDPRRCSQVITKLLYLLNQG 60
MA + KKDDD D F ++KG V+QE R FN+ + PR+CS VI++ LYLL++G
Sbjct: 1 MASRVQKKDDDESDFL----FENLDKGQVIQEKRAFNESPIHPRKCSLVISQFLYLLSRG 56
Query: 61 ETFTKIEATEVFFAVTKLFQSRDIGLRRMVYLMIKELSPSADEVIIVTSSLMKDMTSKTD 120
++FTK EAT++FFA TKLFQS+DI LRR++YL++KELS + + IIV SSL KDM+ K +
Sbjct: 57 DSFTKTEATDIFFAATKLFQSKDIPLRRLMYLLLKELSTISQDAIIVISSLTKDMSHKIE 116
Query: 121 MYRANAIRVLCRITDGTLLTQIERYLKQAIVDKNPVVASAALVSGIHLLQTTPEIVKRWS 180
+YRANAIR+LC+ITD ++L QIERY KQ+IV+K+P V+SAALVS IHLL+ PEIVKRW+
Sbjct: 117 LYRANAIRILCKITDSSILPQIERYFKQSIVEKDPHVSSAALVSSIHLLKVCPEIVKRWA 176
Query: 181 NEVQEAVQSRAALVQFHALALLHQIRQNDRLAVSKLVTSLTRGTVRSPLAQCLLIRYTTQ 240
NEVQEA+ +++ +VQ+HALALLH+I+Q+DRLAVSKLV++L + ++RSP AQ LIR +
Sbjct: 177 NEVQEAISNKSNMVQYHALALLHRIKQHDRLAVSKLVSNLIKNSLRSPYAQSYLIRCCVE 236
Query: 241 VIREAATTQTGDRPFYDFLESCLRHKAEMVIFEAARAITELNGVTNRELTPAITVLQLFL 300
VI E T T DR F +++ESCLR K EMV +EAAR+I V+N+E+ A+ VLQ FL
Sbjct: 237 VIEE---TNTEDRIFREYIESCLRSKNEMVAYEAARSICTFKNVSNKEINSAVGVLQNFL 293
Query: 301 SSSKPVLRFAAVRTLNK-----------------SLISDQNRSXXXXXXXXXXKTGNESS 343
+S+KP LRFAAVRTLNK +LI+D NRS K GNES+
Sbjct: 294 NSTKPTLRFAAVRTLNKLAQTNPTAVIPCNLDMENLITDTNRSIATLAITTLLKVGNESN 353
Query: 344 VDRLMKQITNFMSDIADEFKIVVVEAIRSLCLKFPLKYRSLMNFLSNILREEGGFEYKKA 403
V+RL+KQI NF+ DI DEFKIVVV+AI SL KFP KY+ L+ FL+ ILR+EG + K+A
Sbjct: 354 VERLIKQIANFLGDINDEFKIVVVDAITSLSQKFPKKYKHLIIFLNKILRDEGTLQLKQA 413
Query: 404 IVDSIVILIRDIPDAKENGLLHLCEFIEDCEFTYLSTQILHFLGTEGPKTSDPSKYIRYI 463
+D+I+ ++ +IP++KE L LC++IEDC+F LS QILH +G EGP TS P++Y+RYI
Sbjct: 414 TLDAILTVVNNIPESKEIALTELCDYIEDCDFPDLSVQILHLIGQEGPLTSSPAQYMRYI 473
Query: 464 YNRVHLENATVRAAAVSTLAKFGAMVDALKPRVFVLLRRCLYDGDDE 510
YNRV L+ +RAAAV+++AKFG + + +K +V +LL+RCL D DDE
Sbjct: 474 YNRVLLDGGIIRAAAVTSIAKFGLLYEPMKEKVVILLQRCLLDEDDE 520
Score = 461 (167.3 bits), Expect = 1.5e-196, Sum P(3) = 1.5e-196
Identities = 103/263 (39%), Positives = 146/263 (55%)
Query: 556 DAYEKLLSSIPEFSDFGKLFKSSAPVELTEAETEYAVNVVKHIFDRHVVFQYNCTNTIPE 615
+++ LS IP+FS FGKL KSS +ELTE ETEY VN VKHI+ H+VFQ+NCTNT+ E
Sbjct: 630 ESFATKLSQIPQFSTFGKLLKSSEYIELTETETEYVVNCVKHIYREHIVFQFNCTNTLNE 689
Query: 616 QLLENVTVIVDXXXXXXXXXXXXKPLRSLPYDSPGQIFGAFEK-P-EGVPAVGKFSNMLR 673
Q L NV+V + P+ LPY P Q + A P G P FSN L+
Sbjct: 690 QQLSNVSVKMVPSDPKLLKYECSIPIDVLPYGEPQQCYVAIRYIPANGYPLCS-FSNALK 748
Query: 674 FIVKEVDPTTXXXXXXXXXXXYQLEDLEVVAADYVMKVGVSNFRNAWESIGPDFERVDEY 733
F VKEVDP+T Y LE LE+V D++ + V NF W+ + D + V +
Sbjct: 749 FKVKEVDPSTGELDEPGYDDQYSLERLEIVPKDFLNRAFVGNFSEEWKKMSEDTQLVQTF 808
Query: 734 GLGPRESLAEAVSAVISLLGMQPCEGTEVVANNSRSHTCLLSGVFIGNVKVLVRLQFGID 793
L +S+ EAV +I LGM P E +EVV S H L+G + N + VR + +D
Sbjct: 809 SLVGVKSIDEAVKQIIKTLGMAPAEKSEVVTPKSAKHILYLTGKSLNNQLIYVRARMKLD 868
Query: 794 GPK-EVAMKLAVRSEDDNVSDMI 815
+ ++L ++S+D++++D +
Sbjct: 869 QSQTNTDVELTIKSDDESLNDFV 891
Score = 44 (20.5 bits), Expect = 1.5e-196, Sum P(3) = 1.5e-196
Identities = 16/37 (43%), Positives = 20/37 (54%)
Query: 504 LYDGDDEEPAEQPFDINSVPKEVKT--QPL-AEKKAP 537
L+ GD EP FDI SV V+T PL + K+P
Sbjct: 563 LHQGDFSEP----FDIASVSTVVETYQSPLLGDGKSP 595
>FB|FBgn0028968 [details] [associations]
symbol:gammaCop "gamma-coatomer protein" species:7227
"Drosophila melanogaster" [GO:0006890 "retrograde vesicle-mediated
transport, Golgi to ER" evidence=ISS;NAS] [GO:0030126 "COPI vesicle
coat" evidence=ISS;NAS] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0006911
"phagocytosis, engulfment" evidence=IMP] [GO:0048812 "neuron
projection morphogenesis" evidence=IMP] [GO:0007424 "open tracheal
system development" evidence=IMP] [GO:0035149 "lumen formation,
open tracheal system" evidence=IMP] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0035147 "branch fusion, open tracheal system"
evidence=IMP] [GO:0009306 "protein secretion" evidence=IMP]
[GO:0008362 "chitin-based embryonic cuticle biosynthetic process"
evidence=IMP] [GO:0010883 "regulation of lipid storage"
evidence=IDA] [GO:0030198 "extracellular matrix organization"
evidence=IMP] [GO:0035158 "regulation of tube diameter, open
tracheal system" evidence=IMP] [GO:0005783 "endoplasmic reticulum"
evidence=IDA] [GO:0007436 "larval salivary gland morphogenesis"
evidence=IMP] [GO:0005801 "cis-Golgi network" evidence=IDA]
InterPro:IPR002553 InterPro:IPR009028 InterPro:IPR013040
InterPro:IPR014863 InterPro:IPR015873 InterPro:IPR016024
Pfam:PF01602 Pfam:PF08752 InterPro:IPR013041 GO:GO:0005783
EMBL:AE014297 GO:GO:0005794 GO:GO:0006886 GO:GO:0006911
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0005198 GO:GO:0008362 HOGENOM:HOG000250272
GO:GO:0030198 GO:GO:0009306 GO:GO:0000910 SUPFAM:SSF55711
SUPFAM:SSF49348 Gene3D:3.30.310.30 GO:GO:0030126 GO:GO:0010883
GO:GO:0035147 GO:GO:0005801 GO:GO:0035158 GO:GO:0007436
eggNOG:COG5240 GeneTree:ENSGT00390000016313 Gene3D:2.60.40.1480
InterPro:IPR017106 PANTHER:PTHR10261 PIRSF:PIRSF037093 OMA:WDEVGEE
HSSP:P53620 EMBL:AF191563 EMBL:AY113545 EMBL:BT001628
RefSeq:NP_001163784.1 RefSeq:NP_524608.1 RefSeq:NP_733432.1
UniGene:Dm.1895 ProteinModelPortal:Q8I0G5 SMR:Q8I0G5
MINT:MINT-1018880 STRING:Q8I0G5 PaxDb:Q8I0G5 PRIDE:Q8I0G5
EnsemblMetazoa:FBtr0085794 GeneID:43717 KEGG:dme:Dmel_CG1528
UCSC:CG1528-RB CTD:43717 FlyBase:FBgn0028968 InParanoid:Q8MYW4
PhylomeDB:Q8I0G5 GenomeRNAi:43717 NextBio:835406 Bgee:Q8I0G5
GO:GO:0035149 Uniprot:Q8I0G5
Length = 883
Score = 880 (314.8 bits), Expect = 2.0e-188, Sum P(3) = 2.0e-188
Identities = 177/313 (56%), Positives = 225/313 (71%)
Query: 7 KKDDDRDDEAEYSPFLGIEKGAVLQEARVFNDPQLDPRRCSQVITKLLYLLNQGETFTKI 66
KK + + +EK +VLQE R FN+ ++PR+C ++TK+LYL+NQGE
Sbjct: 10 KKHRGHPSAGPSNAYQNLEKTSVLQETRTFNETPVNPRKCIHILTKILYLINQGEQLVAR 69
Query: 67 EATEVFFAVTKLFQSRDIGLRRMVYLMIKELSPSADEVIIVTSSLMKDMTSKTDMYRANA 126
EAT+ FFA+TKLFQS+D+ LRRMVYL IKELS A++VIIVTSSL KDMT K D+YRA A
Sbjct: 70 EATDCFFAMTKLFQSKDVVLRRMVYLGIKELSSIAEDVIIVTSSLTKDMTGKEDLYRAAA 129
Query: 127 IRVLCRITDGTLLTQIERYLKQAIVDKNPVVASAALVSGIHLLQTTPEIVKRWSNEVQEA 186
IR LC ITD T+L +ERY+KQ IVDKN V+ AALVS + L T ++VKRW+NE QEA
Sbjct: 130 IRALCSITDNTMLQAVERYMKQCIVDKNAAVSCAALVSSLRLANTAGDVVKRWANEAQEA 189
Query: 187 VQSRAALVQFHALALLHQIRQNDRLAVSKLVTSLTRGTVRSPLAQCLLIRYTTQVIREA- 245
+ S +VQ+HAL LL+ IR++DRLAVSKLV LTRG+++SP A C+LIR ++I E
Sbjct: 190 LNSDNIMVQYHALGLLYHIRKSDRLAVSKLVNKLTRGSLKSPYAVCMLIRIACKLIEEED 249
Query: 246 -ATTQTGDRPFYDFLESCLRHKAEMVIFEAARAITELNGVTNRELTPAITVLQLFLSSSK 304
+ + D P + F+ESCLRHK+EMVI+EAA AI L R L+PA ++LQLF SS K
Sbjct: 250 IPSEELSDSPLFTFIESCLRHKSEMVIYEAAHAIVNLKNTNPRMLSPAFSILQLFCSSPK 309
Query: 305 PVLRFAAVRTLNK 317
LRFAAVRTLNK
Sbjct: 310 ATLRFAAVRTLNK 322
Score = 583 (210.3 bits), Expect = 2.0e-188, Sum P(3) = 2.0e-188
Identities = 119/204 (58%), Positives = 148/204 (72%)
Query: 310 AAVRTLN---KSLISDQNRSXXXXXXXXXXKTGNESSVDRLMKQITNFMSDIADEFKIVV 366
AAV T N + LI+D NRS KTG ESSV+RLMKQI+ F+++I+DEFK+VV
Sbjct: 329 AAVTTCNLDLEGLITDSNRSVATLAITTLLKTGAESSVERLMKQISTFVAEISDEFKVVV 388
Query: 367 VEAIRSLCLKFPLKYRSLMNFLSNILREEGGFEYKKAIVDSIVILIRDIPDAKENGLLHL 426
V+AI +LC K+P K+ LMNFLS +LREEGG EYK +IVD+I+ +I + DAKE+GL HL
Sbjct: 389 VQAICALCTKYPRKHTVLMNFLSGMLREEGGLEYKTSIVDTIITIIEENADAKESGLSHL 448
Query: 427 CEFIEDCEFTYLSTQILHFLGTEGPKTSDPSKYIRYIYNRVHLENATVRAAAVSTLAKFG 486
CEFIEDCE L+ +ILH LG EGP + PSKYIR+IYNRV LE+ VRAAAV+ +A+FG
Sbjct: 449 CEFIEDCEHVSLAVRILHLLGKEGPFAATPSKYIRFIYNRVILESPIVRAAAVTAMAQFG 508
Query: 487 AMVDALKPRVFVLLRRCLYDGDDE 510
A AL + VLL RC D DDE
Sbjct: 509 ASCPALLSNILVLLGRCQMDPDDE 532
Score = 402 (146.6 bits), Expect = 2.0e-188, Sum P(3) = 2.0e-188
Identities = 96/303 (31%), Positives = 151/303 (49%)
Query: 517 FDINSVPKEVKTQPLAEKKAPGKMXXXXXXXXXXXXXTVDAYEKLLSSIPEFSDFGKLFK 576
FDI+ VPK +P+ A M + L+ +P G + +
Sbjct: 583 FDISIVPKAAIVKPVI---ANDVMLVTSSAPRPPKITREEESAARLAQLPGIQVLGPIHR 639
Query: 577 SSAPVELTEAETEYAVNVVKHIFDRHVVFQYNCTNTIPEQLLENVTVIVDXXXXXXXXXX 636
S+AP++LTE+ETEY V +KHIF +HVVFQ++C NT+ +Q+LENV V +
Sbjct: 640 STAPIQLTESETEYTVQCIKHIFGQHVVFQFDCLNTLSDQILENVRV--ELTLPEGFTTR 697
Query: 637 XXKPLRSLPYDSPGQIFGAFE-KPEGVPAVGKFSNMLRFIVKEVDPTTXX-XXXXXXXXX 694
P LPY+ F E P+ ++ F LRF+VK+ DP T
Sbjct: 698 AVIPCPKLPYNDLQTTFVIVEFPPDAANSIATFGATLRFVVKDCDPNTGEPESEEGYDDE 757
Query: 695 YQLEDLEVVAADYVMKVGVSNFRNAWESIGPD--FERVDEYGLGPRESLAEAVSAVISLL 752
Y LEDLE+ AD + K +NF+ +W++ + + D + L +L +AV+ ++ +L
Sbjct: 758 YMLEDLELTVADQIQKTRKNNFQVSWDAADSEEWLQAEDTFVLSAVTTLQDAVNTIVKIL 817
Query: 753 GMQPCEGTEVVANNSRSHTCLLSGVFIGNVKVLVRLQFGIDGPKEVAMKLAVRSEDDNVS 812
G+ +E V + HT L SG F G ++LVR + + + V + L VRS D +V+
Sbjct: 818 GLGAANLSENVPEGTHLHTLLCSGTFRGGAEILVRAKLALS--EGVTLNLTVRSTDQDVA 875
Query: 813 DMI 815
++I
Sbjct: 876 ELI 878
Score = 53 (23.7 bits), Expect = 1.2e-34, Sum P(2) = 1.2e-34
Identities = 56/229 (24%), Positives = 87/229 (37%)
Query: 267 AEMVIFEAARAITELNGVTNRELTPAITVLQLFLSSSKPVLRFAAVRTLNKSLISDQNRS 326
AE VI + ++ G +L A + L + +L+ AV K I D+N +
Sbjct: 104 AEDVIIVTSSLTKDMTG--KEDLYRAAAIRALCSITDNTMLQ--AVERYMKQCIVDKNAA 159
Query: 327 XXXXXXXXXXKTGNESSVDRLMKQITNFMSDIADEFKIVVVEAIRSLCLKFPLKYRSLMN 386
+ N + D ++K+ N + + I+V L R ++
Sbjct: 160 VSCAALVSSLRLANTAG-D-VVKRWANEAQEALNSDNIMVQYHALGLLYHIRKSDRLAVS 217
Query: 387 FLSNILREEGGFEYKKAIVDSIVI---LIR--DIPDAKENGLLHLCEFIEDC-----EFT 436
L N L G + A+ I I LI DIP ++E L FIE C E
Sbjct: 218 KLVNKLTR-GSLKSPYAVCMLIRIACKLIEEEDIP-SEELSDSPLFTFIESCLRHKSEMV 275
Query: 437 -YLSTQILHFLGTEGPKTSDPSKYIRYIYNRVHLENATVRAAAVSTLAK 484
Y + + L P+ P+ I ++ AT+R AAV TL K
Sbjct: 276 IYEAAHAIVNLKNTNPRMLSPAFSILQLF--CSSPKATLRFAAVRTLNK 322
Score = 51 (23.0 bits), Expect = 9.0e-100, Sum P(3) = 9.0e-100
Identities = 20/82 (24%), Positives = 39/82 (47%)
Query: 133 ITDGTLLTQIERYLKQAIVDKNPVVASAALVSGIHLLQTTPEIVKRWSNEVQEAVQSRAA 192
++D L T IE L+ K+ +V A + ++L T P ++ + +Q S A
Sbjct: 255 LSDSPLFTFIESCLRH----KSEMVIYEAAHAIVNLKNTNPRMLSPAFSILQLFCSSPKA 310
Query: 193 LVQFHALALLHQIRQNDRLAVS 214
++F A+ L+++ AV+
Sbjct: 311 TLRFAAVRTLNKVAMTHPAAVT 332
Score = 40 (19.1 bits), Expect = 3.5e-131, Sum P(3) = 3.5e-131
Identities = 17/60 (28%), Positives = 24/60 (40%)
Query: 423 LLHLCEFIEDCEFTYLSTQILHFLGTEGPKTSDPSKYIRYIYNRVHLENATVRAAAVSTL 482
LL C+ D E +T L L +E P+ Y YI R + A + + V L
Sbjct: 521 LLGRCQMDPDDEVRDRATYYLSILNSERPEL-----YKNYIIERENCSLALLEKSLVEHL 575
>WB|WBGene00011775 [details] [associations]
symbol:T14G10.5 species:6239 "Caenorhabditis elegans"
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0005798 "Golgi-associated vesicle"
evidence=IEA] [GO:0000003 "reproduction" evidence=IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0032940 "secretion by cell"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
InterPro:IPR002553 InterPro:IPR009028 InterPro:IPR013040
InterPro:IPR014863 InterPro:IPR015873 InterPro:IPR016024
Pfam:PF01602 Pfam:PF08752 InterPro:IPR013041 GO:GO:0006898
GO:GO:0040010 GO:GO:0006915 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0002119 GO:GO:0032940
GO:GO:0005198 GO:GO:0040011 GO:GO:0000003 SUPFAM:SSF55711
SUPFAM:SSF49348 Gene3D:3.30.310.30 GO:GO:0030126
GeneTree:ENSGT00390000016313 Gene3D:2.60.40.1480 InterPro:IPR017106
PANTHER:PTHR10261 PIRSF:PIRSF037093 OMA:WDEVGEE EMBL:Z68880
GeneID:177891 KEGG:cel:CELE_T14G10.5 CTD:177891
RefSeq:NP_001255464.1 ProteinModelPortal:F5GUA3 SMR:F5GUA3
EnsemblMetazoa:T14G10.5c WormBase:T14G10.5c Uniprot:F5GUA3
Length = 885
Score = 1384 (492.3 bits), Expect = 2.3e-181, Sum P(2) = 2.3e-181
Identities = 279/520 (53%), Positives = 373/520 (71%)
Query: 8 KDDDRDDEAEYSPFLGIEKGAVLQEARVFNDPQLDPRRCSQVITKLLYLLNQGETFTKIE 67
K + +D+E + + ++K +VLQEAR FN+ ++ R+C +++KL+Y++ QGE+ + E
Sbjct: 15 KTNKKDEETGGNVYAHLDKTSVLQEARAFNETPINARKCCFILSKLIYIIQQGESIGRTE 74
Query: 68 ATEVFFAVTKLFQSRDIGLRRMVYLMIKELSPSADEVIIVTSSLMKDMTSKTDMYRANAI 127
ATE FF VTKL+QS+D+ LRRMVYL +KEL+ +D+VIIVTSSL KDMT + D+YRA AI
Sbjct: 75 ATEAFFGVTKLWQSKDVSLRRMVYLAVKELAEVSDDVIIVTSSLTKDMTGREDLYRAAAI 134
Query: 128 RVLCRITDGTLLTQIERYLKQAIVDKNPVVASAALVSGIHLLQTTPEIVKRWSNEVQEAV 187
R LC+ITD +L IERY+KQAIVD+N ++S+A+VS IHL++ + E+V+RW+NEVQEAV
Sbjct: 135 RALCKITDTGMLQTIERYMKQAIVDRNSAISSSAIVSSIHLMRKSSEVVRRWANEVQEAV 194
Query: 188 QSRAALVQFHALALLHQIRQNDRLAVSKLVTSLTRGTVRSPLAQCLLIRYTTQVIREAAT 247
S +VQ+HALALL+QIR NDRLAV+KLV ++ +RSP A C LIR T+ + +
Sbjct: 195 SSDNHMVQYHALALLYQIRANDRLAVNKLVQKFSKNALRSPYAVCYLIRIATRCLVDDDH 254
Query: 248 TQTGDRPFYDFLESCLRHKAEMVIFEAARAITELNGVTNRELTPAITVLQLFLSSSKPVL 307
+ D + F+ESCLRHK+EMV++EAARAI L T E+ PAIT LQ+ +S K +
Sbjct: 255 CRP-DSSVFTFIESCLRHKSEMVVYEAARAIVSLPQTTPSEIQPAITALQMCCTSPKAAV 313
Query: 308 RFAAVRTLNK-----------------SLISDQNRSXXXXXXXXXXKTGNESSVDRLMKQ 350
RFAAVRTLNK I+D NRS KTG ESSV+RLM+Q
Sbjct: 314 RFAAVRTLNKVAMAHPNAVMSCNVDLEKFITDPNRSIATLAITTLLKTGAESSVERLMQQ 373
Query: 351 ITNFMSDIADEFKIVVVEAIRSLCLKFPLKYRSLMNFLSNILREEGGFEYKKAIVDSIVI 410
I F+++I+DEFKIVVV+AIRSLC ++P K+ +M FL+ +LR +G ++YKKAIV++I+
Sbjct: 374 IAGFVNEISDEFKIVVVDAIRSLCSRYPRKHTVMMPFLAKMLRSDGSYDYKKAIVETIIA 433
Query: 411 LIRDIPDAKENGLLHLCEFIEDCEFTYLSTQILHFLGTEGPKTSDPSKYIRYIYNRVHLE 470
+I + PDAK GL HLCEFIEDCE LST++LH LG E PKT +PS YIR+IYNRV LE
Sbjct: 434 IIEENPDAKVAGLAHLCEFIEDCEHDNLSTRVLHLLGREAPKTPNPSSYIRFIYNRVILE 493
Query: 471 NATVRAAAVSTLAKFGAMVDALKPRVFVLLRRCLYDGDDE 510
+ VRAAAV+ LAKFGA L+P + VLL+RCL D DDE
Sbjct: 494 STKVRAAAVTALAKFGAQCVDLRPSIQVLLKRCLLDSDDE 533
Score = 398 (145.2 bits), Expect = 2.3e-181, Sum P(2) = 2.3e-181
Identities = 98/320 (30%), Positives = 159/320 (49%)
Query: 500 LRRCLYDGDDEEPAEQPFDINSVP--KEVKTQPLAEKKAPGKMXXXXXXXXXXXXXTVDA 557
L R + D PFD+ VP ++ +QP EK+ P + V+
Sbjct: 568 LERSILDYLRSGSYSSPFDLRVVPVTQQALSQP--EKRVPQLVEEEEKPKAPK----VEP 621
Query: 558 YEKLLSSIPEFSDFGKLFKSSAPVELTEAETEYAVNVVKHIFDRHVVFQYNCTNTIPEQL 617
Y L++IP+F+ G +FKSS + LTE+ EY V+++KH F +V Q+ C NT+ +QL
Sbjct: 622 YAAQLAAIPQFAALGPVFKSSTRIALTESIAEYTVHMIKHTFANAMVLQFECKNTMNDQL 681
Query: 618 LENVTVIVDXXXXXXXXXXXXKPLRSLPYDSPGQIFGAFEKPEGVPAVGKFSNMLRFIVK 677
L +V+V ++ + + LPY F E P+ G +L+F V
Sbjct: 682 LLDVSVELEDPDGEWETGNTVQ-IDKLPYGEVHSAFSLLEFPDSGAISGSLGAILKFKVM 740
Query: 678 EVDPTTXX-XXXXXXXXXYQLEDLEVVAADYVMKVGVSNFRNAWESIGPDFERVDEYGLG 736
+VDPT+ Y LE+++V +D V V S+F +AWE++G D R + + L
Sbjct: 741 DVDPTSGEPDSDDTYEQTYVLEEVDVNVSDSVQGVAKSSFGSAWEALGDDATREETFQLS 800
Query: 737 PRESLAEAVSAVISLLGMQPCEGTEVVANNSRSHTCLLSGVFIGNVKVLVRLQFGID-GP 795
E++ +AV + +LG+ PCE ++ V HT LSGVF G VL + +D
Sbjct: 801 TVENIPDAVKKISEILGLVPCERSDRVPEGKTQHTVFLSGVFRGGYDVLSKATVAVDPND 860
Query: 796 KEVAMKLAVRSEDDNVSDMI 815
+AM + ++S + V+D++
Sbjct: 861 NSIAMNIIIKSNEPLVADLV 880
>ASPGD|ASPL0000072207 [details] [associations]
symbol:AN4547 species:162425 "Emericella nidulans"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030126
"COPI vesicle coat" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR002553 InterPro:IPR009028
InterPro:IPR013040 InterPro:IPR014863 InterPro:IPR015873
InterPro:IPR016024 Pfam:PF01602 Pfam:PF08752 InterPro:IPR013041
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016192 GO:GO:0005198 EMBL:BN001303 SUPFAM:SSF55711
SUPFAM:SSF49348 Gene3D:3.30.310.30 GO:GO:0030126
HOGENOM:HOG000184434 Gene3D:2.60.40.1480 InterPro:IPR017106
PANTHER:PTHR10261 PIRSF:PIRSF037093 OMA:WDEVGEE
EnsemblFungi:CADANIAT00005891 Uniprot:C8V880
Length = 917
Score = 690 (248.0 bits), Expect = 3.7e-158, Sum P(3) = 3.7e-158
Identities = 162/344 (47%), Positives = 219/344 (63%)
Query: 186 AVQSRAALVQFHALALLHQIRQNDRLAVSKLVTSL-TRGTVRSPLAQCLLIRYTTQVIRE 244
A+ + Q+HA+ LL+Q+R +DR+A+ K+V G V+SP A LL+R ++ E
Sbjct: 201 AISQSNFMTQYHAIGLLYQMRSHDRMALVKMVQQYGAAGVVKSPAALVLLVRLAAKLAEE 260
Query: 245 AATTQTGDRPFYD-FLE---SCLRHKAEMVIF--------EAARAITELNGVTN--RELT 290
+ + D +L + +A I EA++A+ L + R +T
Sbjct: 261 DSGLRKPMMQMLDGWLRHKHEMVNFEAAKAICDIRDVSDAEASQAVHVLQLFLSSPRAIT 320
Query: 291 P--AITVLQLFLSSSKPVLRFAAVRTLNKSLISDQNRSXXXXXXXXXXKTGNESSVDRLM 348
AI +L F +S KP + + ++LIS+ NRS KTGNE+SVDRLM
Sbjct: 321 KFAAIRILHRF-ASFKPHVVNVCNPDI-EALISNTNRSIATFAITTLLKTGNEASVDRLM 378
Query: 349 KQITNFMSDIADEFKIVVVEAIRSLCLKFPLKYRSLMNFLSNILREEGGFEYKKAIVDSI 408
KQI+ FM+DI DEFKI +VEAIR+LCLKFP K +++FLS ILR+EGG+E+K+++V+S+
Sbjct: 379 KQISGFMADITDEFKITIVEAIRTLCLKFPSKQAGMLSFLSGILRDEGGYEFKRSVVESM 438
Query: 409 VILIRDIPDAKENGLLHLCEFIEDCEFTYLSTQILHFLGTEGPKTSDPSKYIRYIYNRVH 468
LI+ +P++KE+ L HLCEFIEDCEFT LS ++LH LG EGPKTS P+KYIRYIYNRV
Sbjct: 439 FDLIKFVPESKEDALAHLCEFIEDCEFTKLSVRVLHLLGVEGPKTSQPTKYIRYIYNRVV 498
Query: 469 LENATVRAAAVSTLAKFGA-MVDA-LKPRVFVLLRRCLYDGDDE 510
LENA VRAAAV+ LAKFG D +K V VLL RCL D DDE
Sbjct: 499 LENAIVRAAAVTALAKFGVGQKDPEVKSSVSVLLTRCLDDTDDE 542
Score = 451 (163.8 bits), Expect = 3.7e-158, Sum P(3) = 3.7e-158
Identities = 114/329 (34%), Positives = 163/329 (49%)
Query: 509 DEEPAEQPFDINSVPKEVKTQPLAEK------------KAPG----KMXXXXXXXXXXXX 552
D+E FD++++P + Q LAE+ KAP K
Sbjct: 588 DKETFATAFDVSTIPVVSQEQALAEERTKKLTSATPTLKAPSTGPPKGAKANGVAEAATA 647
Query: 553 XTVDAYEKLLSSIPEFSDFGKLFKSSAPVELTEAETEYAVNVVKHIFDRHVVFQYNCTNT 612
Y + L IPE +G L KSS PVEL+E+ETEY V VKHIF H+V QY+ NT
Sbjct: 648 AATQKYAEQLMQIPELKAYGTLLKSSVPVELSESETEYVVTAVKHIFKEHIVLQYDIKNT 707
Query: 613 IPEQLLENVTVIVDXXXXXXXXXXXXKPLRSLPYDSPGQIFGAFEKPEG---VPAVGKFS 669
+P+ +LE+VTV+ P L + PG ++ F+K EG VP V F+
Sbjct: 708 LPDTVLEDVTVVATPSEEDILEEEFIVPAPKLNTNEPGVVYVTFKKLEGEQSVPVVS-FT 766
Query: 670 NMLRFIVKEVDPTTXXXXXXXXXXXYQLEDLEVVAADYVMKVGVSNFRNAWESIGPDFER 729
N L+F KE+DPTT YQ+ DLE+ +DYV+ +F + WE G + E
Sbjct: 767 NNLKFTTKEIDPTTGEPEDSGYEDEYQVNDLELTGSDYVIPTFAGSFDHVWEQAGANGEE 826
Query: 730 VDE-YGLGPRESLAEAVSAVISLLGMQPCEGTEVVANNSRSHTCLLSG--VFIGNVKVLV 786
V E L + +A+A +IS L +QP EGT+V +NS +HT L G V G V L+
Sbjct: 827 VSETLQLSNLKGIADATEQLISTLSLQPLEGTDVALSNS-THTLKLFGKTVLGGRVAALI 885
Query: 787 RLQFGIDGPKEVAMKLAVRSEDDNVSDMI 815
++ + V K+ VR+E+ V+ +
Sbjct: 886 KMAYSTK--TGVTTKITVRAEEGGVAPAV 912
Score = 437 (158.9 bits), Expect = 3.7e-158, Sum P(3) = 3.7e-158
Identities = 93/208 (44%), Positives = 135/208 (64%)
Query: 6 VKKDDDRDDEAEYSPFLGIEKGAVLQEARVFNDPQLDPRRCSQVITKLLYLLNQGETFTK 65
+KKD+D D + +++ +V Q+AR+FN + PR+C ++TK+ L+ GE F
Sbjct: 4 MKKDEDADQT-----MIKLDRTSVFQDARLFNSSPISPRQCRTLLTKIAVLVFTGEQFPT 58
Query: 66 IEATEVFFAVTKLFQSRDIGLRRMVYLMIKELSPSADEVIIVTSSLMKDMTSKTD-MYRA 124
EAT +FF ++KLFQ++D LR+MVYL++KEL+ +A++VI+ TS +MKD +D +YRA
Sbjct: 59 NEATTLFFGISKLFQNKDPSLRQMVYLILKELANTAEDVIMSTSIIMKDTAVGSDVLYRA 118
Query: 125 NAIRVLCRITDGTLLTQIERYLKQAIVDKNPVVASAALVSGIHLLQTTPEIVKRWSNEVQ 184
NAIR LCRI D T + IER +K AIVDK P V+SAALVS HLL ++V+RW +E Q
Sbjct: 119 NAIRALCRIIDATTVQGIERLIKTAIVDKTPSVSSAALVSSYHLLPIARDVVRRWQSETQ 178
Query: 185 EAVQSR---AALVQFHALALLHQIRQND 209
EA S + F + H I Q++
Sbjct: 179 EAASSSKQSTGFLGFGGSSQAHAISQSN 206
Score = 46 (21.3 bits), Expect = 5.0e-40, Sum P(3) = 5.0e-40
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 100 SADEVIIVTSSLMKDMTSKTDMYRANAIRVLC 131
S D ++ S M D+T + + AIR LC
Sbjct: 373 SVDRLMKQISGFMADITDEFKITIVEAIRTLC 404
Score = 46 (21.3 bits), Expect = 5.0e-40, Sum P(3) = 5.0e-40
Identities = 17/63 (26%), Positives = 33/63 (52%)
Query: 140 TQIERYLKQAIVDKNPVVASAAL--VSGIHLLQTTPEI-------VKRWSNEVQEAVQSR 190
T+ RY+ +V +N +V +AA+ ++ + Q PE+ + R ++ + V+ R
Sbjct: 487 TKYIRYIYNRVVLENAIVRAAAVTALAKFGVGQKDPEVKSSVSVLLTRCLDDTDDEVRDR 546
Query: 191 AAL 193
AAL
Sbjct: 547 AAL 549
>RGD|1566215 [details] [associations]
symbol:Copg2 "coatomer protein complex, subunit gamma 2"
species:10116 "Rattus norvegicus" [GO:0006886 "intracellular
protein transport" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
InterPro:IPR002553 InterPro:IPR016024 Pfam:PF01602 RGD:1566215
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0030117 GO:GO:0016192 GeneTree:ENSGT00390000016313
InterPro:IPR017106 PANTHER:PTHR10261 IPI:IPI00767794
Ensembl:ENSRNOT00000033706 UCSC:RGD:1566215 OrthoDB:EOG4CG093
ArrayExpress:D4ABY2 Uniprot:D4ABY2
Length = 490
Score = 1367 (486.3 bits), Expect = 1.0e-139, P = 1.0e-139
Identities = 276/492 (56%), Positives = 364/492 (73%)
Query: 5 LVKKDDDRDDEAEY--SPFLGIEKGAVLQEARVFNDPQLDPRRCSQVITKLLYLLNQGET 62
++KK D +D+E+ +PF +EK AVLQEAR+FN+ ++PRRC ++TK+LYLLNQGE
Sbjct: 1 MIKKFDKKDEESGSGSNPFQHLEKSAVLQEARIFNETPINPRRCLHILTKILYLLNQGEH 60
Query: 63 FTKIEATEVFFAVTKLFQSRDIGLRRMVYLMIKELSPSADEVIIVTSSLMKDMTSKTDMY 122
F +EATE FFA+T+LFQS D LRRM YL IKE++ +++VIIVTSSL KDMT K D+Y
Sbjct: 61 FGTMEATEAFFAMTRLFQSNDQTLRRMCYLTIKEMATISEDVIIVTSSLTKDMTGKEDVY 120
Query: 123 RANAIRVLCRITDGTLLTQIERYLKQAIVDKNPVVASAALVSGIHLLQTTPEIVKRWSNE 182
R AIR LCRITDGT+L IERY+KQAIVDK V+S+ALVS +H+++ + ++VKRW NE
Sbjct: 121 RGPAIRALCRITDGTMLQAIERYMKQAIVDKVSSVSSSALVSSLHMMKISYDVVKRWINE 180
Query: 183 VQEAVQSRAALVQFHALALLHQIRQNDRLAVSKLVTSLTRGTVRSPLAQCLLIRYTTQVI 242
QEA S +VQ+HAL +L+ +R+NDRLAVSK++ T+ ++S A C+LIR ++++
Sbjct: 181 AQEAASSDNIMVQYHALGVLYHLRKNDRLAVSKMLNKFTKSGLKSQFAYCMLIRIASRLL 240
Query: 243 REAATTQTGDRPFYDFLESCLRHKAEMVIFEAARAITELNGVTNRELTPAITVLQLFLSS 302
+E+ + P +DF+ESCLR+K EMVI+EAA AI L T REL PA++VLQLF SS
Sbjct: 241 KESEDGH--ESPLFDFIESCLRNKHEMVIYEAASAIIHLPNCTARELAPAVSVLQLFCSS 298
Query: 303 SKPVLRFAAVRTLNK-----------------SLISDQNRSXXXXXXXXXXKTGNESSVD 345
KP LR+AAVRTLNK +LI+D NRS KTG+ESSVD
Sbjct: 299 PKPALRYAAVRTLNKVAMKHPSAVTACNLDLENLITDSNRSIATLAITTLLKTGSESSVD 358
Query: 346 RLMKQITNFMSDIADEFKIV-VVEAIRSLCLKFPLKYRSLMNFLSNILREEGGFEYKKAI 404
RLMKQI++F+S+I+DEFK+ VV+AI +LC K+P K+ +M FLSN+LR++GGFEYKKAI
Sbjct: 359 RLMKQISSFVSEISDEFKVSGVVQAISALCQKYPRKHSVMMTFLSNMLRDDGGFEYKKAI 418
Query: 405 VDSIVILIRDIPDAKENGLLHLCEFIEDCEFTYLSTQILHFLGTEGPKTSDPSKYIRYIY 464
VD I+ ++ + P++KE GL HLCEFIEDCE T L+T+ILH LG EGP+T PSKYIR+I+
Sbjct: 419 VDCIISIVEENPESKEAGLAHLCEFIEDCEHTVLATKILHLLGKEGPRTPVPSKYIRFIF 478
Query: 465 NRVHLENATVRA 476
NRV LEN VRA
Sbjct: 479 NRVVLENEAVRA 490
>POMBASE|SPAC57A7.10c [details] [associations]
symbol:sec21 "coatomer gamma subunit Sec21 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006886 "intracellular protein transport"
evidence=IC] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=ISO] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=ISO] [GO:0030126 "COPI vesicle coat"
evidence=ISO] InterPro:IPR002553 InterPro:IPR009028
InterPro:IPR013040 InterPro:IPR014863 InterPro:IPR015873
InterPro:IPR016024 Pfam:PF01602 Pfam:PF08752 InterPro:IPR013041
PomBase:SPAC57A7.10c GO:GO:0005829 GO:GO:0006886 EMBL:CU329670
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GenomeReviews:CU329670_GR GO:GO:0005198
GO:GO:0006888 SUPFAM:SSF55711 SUPFAM:SSF49348 Gene3D:3.30.310.30
GO:GO:0030126 GO:GO:0006890 eggNOG:COG5240 HOGENOM:HOG000184434
Gene3D:2.60.40.1480 InterPro:IPR017106 PANTHER:PTHR10261
PIRSF:PIRSF037093 OMA:DESIFAN PIR:T38944 RefSeq:NP_593371.1
ProteinModelPortal:P87140 STRING:P87140 EnsemblFungi:SPAC57A7.10c.1
GeneID:2542247 KEGG:spo:SPAC57A7.10c OrthoDB:EOG4FFH8X
NextBio:20803312 Uniprot:P87140
Length = 905
Score = 636 (228.9 bits), Expect = 5.4e-139, Sum P(3) = 5.4e-139
Identities = 161/371 (43%), Positives = 226/371 (60%)
Query: 191 AALVQFHALALLHQIRQNDRLAVSKLVTSLTR--GTVRSPLAQCLLIRYTTQVIREAATT 248
+ + Q+HAL LL++IR++D +A++KL+ L GTV + A +LIRY + ++ + T
Sbjct: 208 SGISQYHALGLLYRIRRHDSIAMNKLLQLLVSNLGTVSNSHAFVMLIRYISSLMDQ--NT 265
Query: 249 QTGDR--PF-YDFLESC-----LRHKAEMVIF--------EAARAITELNGVTNRELT-- 290
Q D+ PF + +L+S L MV + ++ ++ ++R T
Sbjct: 266 QFRDQMVPFLHGWLKSKGDMVNLEVARNMVRLKNISDDDLQPVVSVLKIFLSSHRSATRF 325
Query: 291 PAITVLQLFLSSSKPVLRFAAVRTLN-KSLISDQNRSXXXXXXXXXXKTGNESSVDRLMK 349
AI L L+ ++P L + LN +SLI+D NRS KTGN+ SVDRLMK
Sbjct: 326 SAIRTLNE-LAMTRPHLVHSC--NLNIESLITDVNRSIATYAITTLLKTGNDESVDRLMK 382
Query: 350 QITNFMSDIADEFKIVVVEAIRSLCLKFPLKYRSLMNFLSNILREEGGFEYKKAIVDSIV 409
QI FMSDI+D FKI+VV+AIRSLCLKFP K S++ FLSNIL +EGG+E+K+A VD+I
Sbjct: 383 QIVTFMSDISDNFKIIVVDAIRSLCLKFPRKQDSMLTFLSNILCDEGGYEFKRAAVDAIS 442
Query: 410 ILIRDIPDAKENGLLHLCEFIEDCEFTYLSTQILHFLGTEGPKTSDPSKYIRYIYNRVHL 469
+I+ IP++KE L LCEFIEDCE+ ++ +IL LG EGPK S+P+++IRYIYNR+ L
Sbjct: 443 DMIKYIPESKERALAELCEFIEDCEYPKIAVRILSILGEEGPKASEPTRFIRYIYNRIML 502
Query: 470 ENATVRAAAVSTLAKFGAMV-DALKPR-VFVLLRRCLYDGDDEEPAEQPFDINSVPKEVK 527
ENA VR+AAVS L KFG D R V V+L RCL D DDE F + ++
Sbjct: 503 ENAIVRSAAVSALTKFGLNAEDKFVQRSVKVILTRCLEDADDEVRDRAAFSVKALEDRDA 562
Query: 528 TQPLAEK-KAP 537
P+ + K P
Sbjct: 563 FLPVVKSDKIP 573
Score = 419 (152.6 bits), Expect = 5.4e-139, Sum P(3) = 5.4e-139
Identities = 89/184 (48%), Positives = 121/184 (65%)
Query: 7 KKDDDRDDEAEYSPFLGIEKGAVLQEARVFNDPQLDPRRCSQVITKLLYLLNQGETFTKI 66
KKDDD D+ S F + + V Q+AR FN + PR+ ++++K+ YL+ GE F +
Sbjct: 5 KKDDDGDE----SIFANVNQVTVTQDARAFNSSSISPRKSRRLLSKIAYLIYTGEHFQEK 60
Query: 67 EATEVFFAVTKLFQSRDIGLRRMVYLMIKELSPSADEVIIVTSSLMKDM-TSKTDMYRAN 125
+ATE+FF +TKLFQ +D LR+ VY++IKELS A++VI++TSS+MKD T + +YR N
Sbjct: 61 QATELFFGITKLFQHKDPSLRQFVYIIIKELSVVAEDVIMITSSIMKDTATGRETIYRPN 120
Query: 126 AIRVLCRITDGTLLTQIERYLKQAIVDKNPVVASAALVSGIHLLQTTPEIVKRWSNEVQE 185
AIR L R+ D + IER L IVD VASAALVS HL +IV RW+NEVQ+
Sbjct: 121 AIRSLIRVIDANTVPAIERILTTGIVDPISAVASAALVSAYHLYPVAKDIVSRWNNEVQD 180
Query: 186 AVQS 189
AV S
Sbjct: 181 AVTS 184
Score = 344 (126.2 bits), Expect = 5.4e-139, Sum P(3) = 5.4e-139
Identities = 102/329 (31%), Positives = 157/329 (47%)
Query: 500 LRRCLYDGDDEEPAEQPFDINSVP----KEVKTQPLAEKKAPGKMXXXXXXXX----XXX 551
L R L E Q FDI SVP +E+ + L KKA ++
Sbjct: 578 LERSLVIYISERKFGQGFDIKSVPVLSQEEIDAENLRIKKATTEVEFTEVTPAEDQNALA 637
Query: 552 XXTVDA-YEKLLSSIPEFSDFGKLFKSS-APVELTEAETEYAVNVVKHIFDRHVVFQYNC 609
++ + L S+ EF+++G + KSS +P+ELTE ETE+ V VVKH+F H+V Q+
Sbjct: 638 SSNIETEFLNALESVSEFNEYGPVLKSSPSPIELTEQETEFVVKVVKHVFKDHLVVQFQL 697
Query: 610 TNTIPEQLLENVTVIVDXXXXXXXXXXXXKPLRSLPYDSPGQIFGAFEKPEGVP-AVGKF 668
NT+ E +LEN V+V P ++ P IF +F+ + VP +
Sbjct: 698 HNTLSEVILENA-VVVSTPSTDDLVEECVVPA-AIVSGEPVSIFVSFKFNDSVPYPLTTL 755
Query: 669 SNMLRFIVKEVDPTTXXXXXXXXXXXYQLEDLEVVAADYVMKVGVSNFRNAWESIGPDFE 728
+N L+F KE+D T Y+++DL+V A D++ SNF ++S+ + E
Sbjct: 756 TNTLQFTTKEIDIHTGEPEEEGYEDEYKIDDLDVSAGDFISPAYESNFDGLFDSL--EHE 813
Query: 729 RVDEYGLGPRESLAEAVSAVISLLGMQPCEGTEVVANNSRSHTCLLSGVFIGNVKVL--V 786
+ Y L +S S V LL MQP EGTE + H LSG + KVL V
Sbjct: 814 ASEVYVLSLLDSFRSTCSRVAELLQMQPLEGTENPTDKP-VHVMKLSGKLVNGEKVLALV 872
Query: 787 RLQFGIDGPKEVAMKLAVRSEDDNVSDMI 815
++ DG + + +K+ R E D+ +++
Sbjct: 873 KMAHSKDG-EGITIKVIARGESDSSVELV 900
Score = 50 (22.7 bits), Expect = 8.6e-28, Sum P(2) = 8.6e-28
Identities = 78/360 (21%), Positives = 145/360 (40%)
Query: 93 MIKELSPSADEVIIVTSSLMKDMTSKTDMYRANAIRVLCRI--TDGTLLTQIERYLKQAI 150
M++ + S D++ V S L ++S R +AIR L + T L+ ++ I
Sbjct: 294 MVRLKNISDDDLQPVVSVLKIFLSSHRSATRFSAIRTLNELAMTRPHLVHSCNLNIESLI 353
Query: 151 VDKNPVVASAALVSGIHLLQT-TPEIVKRWSNEV---QEAVQSRAALVQFHA---LALLH 203
D N +A+ A+ + LL+T E V R ++ + ++ A L L
Sbjct: 354 TDVNRSIATYAITT---LLKTGNDESVDRLMKQIVTFMSDISDNFKIIVVDAIRSLCLKF 410
Query: 204 QIRQNDRLA-VSKLVTSLTRGTVRSPLAQCL--LIRYTTQVIREAATTQTGDRPFYDFLE 260
+Q+ L +S ++ + + +I+Y + +E A + +F+E
Sbjct: 411 PRKQDSMLTFLSNILCDEGGYEFKRAAVDAISDMIKYIPES-KERALAE-----LCEFIE 464
Query: 261 SCLRHKAEMVIFEAARAITELNGVTNRELTPAITVLQLFLSSSKPVLRFAAVRTLNKSLI 320
C K + I +I G E T I + + ++R AAV L K +
Sbjct: 465 DCEYPKIAVRIL----SILGEEGPKASEPTRFIRYIYNRIMLENAIVRSAAVSALTKFGL 520
Query: 321 SDQNRSXXXXXXXXXXKTGNESSVDRLMKQITNFMSDIADE---FKIVVVEAIRSLCLKF 377
+ +++ + E + D + + + + D +V + I SL
Sbjct: 521 NAEDKFVQRSVKVILTRC-LEDADDEVRDRAAFSVKALEDRDAFLPVVKSDKIPSL---- 575
Query: 378 PLKYRSLMNFLSNILREEG-GFEYKKAIVDSIVILIRDIPDAKENGLLHLCEFIEDCEFT 436
P RSL+ ++S R+ G GF+ K S+ +L ++ DA EN L + + + EFT
Sbjct: 576 PALERSLVIYISE--RKFGQGFDIK-----SVPVLSQEEIDA-EN--LRIKKATTEVEFT 625
Score = 45 (20.9 bits), Expect = 2.9e-27, Sum P(2) = 2.9e-27
Identities = 26/113 (23%), Positives = 48/113 (42%)
Query: 81 SRDIGLRRMVYLMIKELSPSADEVIIVTSSLMKDMTSKTDMYRANAIRVLC----RITDG 136
+R I + L+ S D ++ + M D++ + +AIR LC R D
Sbjct: 357 NRSIATYAITTLLKTGNDESVDRLMKQIVTFMSDISDNFKIIVVDAIRSLCLKFPRKQD- 415
Query: 137 TLLTQIERYLKQAIVDKNPVVASAALVSGIH-LLQTTPEIVKRWSNEVQEAVQ 188
++LT +L + D+ A V I +++ PE +R E+ E ++
Sbjct: 416 SMLT----FLSNILCDEGGYEFKRAAVDAISDMIKYIPESKERALAELCEFIE 464
>GENEDB_PFALCIPARUM|PF11_0463 [details] [associations]
symbol:PF11_0463 "coat protein, gamma subunit,
putative" species:5833 "Plasmodium falciparum" [GO:0005829
"cytosol" evidence=ISS] [GO:0016192 "vesicle-mediated transport"
evidence=ISS] InterPro:IPR002553 InterPro:IPR009028
InterPro:IPR013040 InterPro:IPR014863 InterPro:IPR015873
InterPro:IPR016024 Pfam:PF01602 Pfam:PF08752 InterPro:IPR013041
GO:GO:0005829 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0016192 GO:GO:0005198 SUPFAM:SSF55711
SUPFAM:SSF49348 Gene3D:3.30.310.30 GO:GO:0030126 EMBL:AE014186
HOGENOM:HOG000184434 Gene3D:2.60.40.1480 InterPro:IPR017106
PANTHER:PTHR10261 PIRSF:PIRSF037093 RefSeq:XP_001348130.1
ProteinModelPortal:Q8IHR6 PRIDE:Q8IHR6
EnsemblProtists:PF11_0463:mRNA GeneID:811006 KEGG:pfa:PF11_0463
EuPathDB:PlasmoDB:PF3D7_1145100 OMA:EDVEYSP ProtClustDB:CLSZ2433713
Uniprot:Q8IHR6
Length = 1068
Score = 589 (212.4 bits), Expect = 7.7e-125, Sum P(5) = 7.7e-125
Identities = 120/240 (50%), Positives = 171/240 (71%)
Query: 8 KDDDRDDEAEY-SPFLGIEKGAVLQEARVFNDPQLDPRRCSQVITKLLYLLNQGETF-TK 65
K+ DDE + +P G +K ++LQE RVF+ L+ ++C Q++TK+LYL+N+G+ T
Sbjct: 17 KEYKNDDEKNFVNPHEG-DKASILQETRVFSSYPLNTQKCLQILTKILYLINKGDDILTS 75
Query: 66 IEATEVFFAVTKLFQSRDIGLRRMVYLMIKELSPSADEVIIVTSSLMKDMTSKTDMYRAN 125
E T++FF++TKLFQS + LRRM+YL+IK L S E+ IVTSSL KDM S D YRAN
Sbjct: 76 QECTDIFFSITKLFQSNNERLRRMIYLLIKNLPVSEKEIFIVTSSLTKDMNSANDCYRAN 135
Query: 126 AIRVLCRITDGTLLTQIERYLKQAIVDKNPVVASAALVSGIHLLQ-TTPEIVKRWSNEVQ 184
AIRVL +I D +L TQIERYLK A+VD+NP V+++AL+ G++L T+ +IVK+W NEV
Sbjct: 136 AIRVLSKIIDFSLATQIERYLKTAVVDRNPFVSTSALLCGLNLYNNTSSDIVKKWINEVS 195
Query: 185 EAVQSRAALVQFHALALLHQIRQNDRLAVSKLVTSLTRG--TVRSPLAQCLLIRYTTQVI 242
E + S+ ++QFHAL LL I+ D+LA+ K++ S T+ T+ S LA CLLI+Y + +I
Sbjct: 196 ECINSKHPMIQFHALTLLCSIKNQDKLALEKIINSYTKNSHTLSSSLANCLLIKYASYLI 255
Score = 419 (152.6 bits), Expect = 7.7e-125, Sum P(5) = 7.7e-125
Identities = 83/219 (37%), Positives = 132/219 (60%)
Query: 317 KSLISDQNRSXXXXXXXXXXKTGNESSVDRLMKQITNFMSDIADEFKIVVVEAIRSLCLK 376
++L+ D N+S KTGNE+S+D+L+ QI N+M+ FKI ++E +++LC
Sbjct: 444 ENLLYDNNKSICVLAFTTLLKTGNETSIDKLLNQINNYMTADNTTFKIKIIEEVKNLCFI 503
Query: 377 FPLKYRSLMNFLSNILREEGGFEYKKAIVDSIVILIRDIPDAKENGLLHLCEFIEDCEFT 436
+P K ++NFLSN LR++ +++K + +DSI+++I ++P+A+E +L LCEFIEDCE+
Sbjct: 504 YPNKCNIILNFLSNNLRDDESYQFKASTIDSIILIITNLPNAEETAILQLCEFIEDCEYH 563
Query: 437 YLSTQILHFLGTEGPKTSDPSKYIRYIYNRVHLENATVRAAAVSTLAKFGAMVDALKPRV 496
L +++ FL PKT +PSKYIRYIYNR+ LEN+T+R + L +
Sbjct: 564 ALLLKVIRFLLMHIPKTKNPSKYIRYIYNRLLLENSTIRIDGMYALFYIALKCAENSKDI 623
Query: 497 FVLLRRCLYDGDDEEPAEQPFDINSVPKEVKTQPLAEKK 535
VLL L D DDE F + +++K + K+
Sbjct: 624 LVLLNCLLADNDDEVRDRTNFFYYMLKEKIKELDTSNKQ 662
Score = 117 (46.2 bits), Expect = 7.7e-125, Sum P(5) = 7.7e-125
Identities = 31/124 (25%), Positives = 62/124 (50%)
Query: 695 YQLEDLEVVAADYVM-KV-GVSNFRNAWESI-GPDFERVDEYGLGPRESLAEAVSAVISL 751
Y + + D++ K+ F++ W+S+ + E V ++ L +++ +AV +++
Sbjct: 941 YSINPFSIQIVDFINPKILRHGEFKHIWDSMHNYNAEVVSKFSLN-FQNIQQAVVGLLNT 999
Query: 752 LGMQPCEGTEVVANNSRSHTCLLSGVFIGNVKVLVRLQFGIDGPKEVAMKLAVRSEDDNV 811
L M C+ T+ V NNS +H LLS F+ + VL + + +K+ RS + +
Sbjct: 1000 LNMVACDQTDYVENNSNNHNMLLSAQFLNDTYVLCKASLILSQQYGCLLKITCRSTNKFL 1059
Query: 812 SDMI 815
S+ I
Sbjct: 1060 SEHI 1063
Score = 107 (42.7 bits), Expect = 7.7e-125, Sum P(5) = 7.7e-125
Identities = 23/78 (29%), Positives = 43/78 (55%)
Query: 581 VELTEAETEYAVNVVKHIFDRHVVFQYNCTNTIPEQLLENVTVIVDXXXXXXXXXXXXKP 640
+ LTE+E EY V + K I+++H+V ++ NT+ EQ+L N+ V +
Sbjct: 806 IPLTESEAEYTVFLKKFIYNQHLVLEFTIHNTLSEQILSNLNVQMHSSENKWTILEKTT- 864
Query: 641 LRSLPYDSPGQIFGAFEK 658
+ +L Y++P Q++ +K
Sbjct: 865 IDNLYYNTPQQLYVILKK 882
Score = 91 (37.1 bits), Expect = 7.7e-125, Sum P(5) = 7.7e-125
Identities = 28/74 (37%), Positives = 43/74 (58%)
Query: 256 YDFLESCLRH-KAEMVIFEAARAITEL--------NGVT--NRE-LTPAITVLQLFLSSS 303
+D+L++CL++ K +++FE + I EL N T N + L I V QLFL SS
Sbjct: 354 FDYLKNCLKNNKDAIILFECIKCIFELAIYDQEGKNTTTVFNVDILNECIKVCQLFLLSS 413
Query: 304 KPVLRFAAVRTLNK 317
K V +F+ +R +NK
Sbjct: 414 KIVDKFSIIRQINK 427
Score = 45 (20.9 bits), Expect = 8.9e-09, Sum P(3) = 8.9e-09
Identities = 25/109 (22%), Positives = 41/109 (37%)
Query: 267 AEMVIFEAARAIT-ELNGVTNRELTPAITVLQLFLSSSKPVLRFAAVRTLNKSLISDQNR 325
+E IF ++T ++N + AI VL + S L R L K+ + D+N
Sbjct: 110 SEKEIFIVTSSLTKDMNSANDCYRANAIRVLSKIIDFS---LATQIERYL-KTAVVDRNP 165
Query: 326 SXXXXXXXXXXKTGNESSVDRLMKQITNFMSDIADEFKIVVVEAIRSLC 374
N +S D + K I I + ++ A+ LC
Sbjct: 166 FVSTSALLCGLNLYNNTSSDIVKKWINEVSECINSKHPMIQFHALTLLC 214
>UNIPROTKB|Q8IHR6 [details] [associations]
symbol:PF11_0463 "Coatomer subunit gamma" species:36329
"Plasmodium falciparum 3D7" [GO:0005829 "cytosol" evidence=ISS]
[GO:0016192 "vesicle-mediated transport" evidence=ISS]
InterPro:IPR002553 InterPro:IPR009028 InterPro:IPR013040
InterPro:IPR014863 InterPro:IPR015873 InterPro:IPR016024
Pfam:PF01602 Pfam:PF08752 InterPro:IPR013041 GO:GO:0005829
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016192 GO:GO:0005198 SUPFAM:SSF55711 SUPFAM:SSF49348
Gene3D:3.30.310.30 GO:GO:0030126 EMBL:AE014186 HOGENOM:HOG000184434
Gene3D:2.60.40.1480 InterPro:IPR017106 PANTHER:PTHR10261
PIRSF:PIRSF037093 RefSeq:XP_001348130.1 ProteinModelPortal:Q8IHR6
PRIDE:Q8IHR6 EnsemblProtists:PF11_0463:mRNA GeneID:811006
KEGG:pfa:PF11_0463 EuPathDB:PlasmoDB:PF3D7_1145100 OMA:EDVEYSP
ProtClustDB:CLSZ2433713 Uniprot:Q8IHR6
Length = 1068
Score = 589 (212.4 bits), Expect = 7.7e-125, Sum P(5) = 7.7e-125
Identities = 120/240 (50%), Positives = 171/240 (71%)
Query: 8 KDDDRDDEAEY-SPFLGIEKGAVLQEARVFNDPQLDPRRCSQVITKLLYLLNQGETF-TK 65
K+ DDE + +P G +K ++LQE RVF+ L+ ++C Q++TK+LYL+N+G+ T
Sbjct: 17 KEYKNDDEKNFVNPHEG-DKASILQETRVFSSYPLNTQKCLQILTKILYLINKGDDILTS 75
Query: 66 IEATEVFFAVTKLFQSRDIGLRRMVYLMIKELSPSADEVIIVTSSLMKDMTSKTDMYRAN 125
E T++FF++TKLFQS + LRRM+YL+IK L S E+ IVTSSL KDM S D YRAN
Sbjct: 76 QECTDIFFSITKLFQSNNERLRRMIYLLIKNLPVSEKEIFIVTSSLTKDMNSANDCYRAN 135
Query: 126 AIRVLCRITDGTLLTQIERYLKQAIVDKNPVVASAALVSGIHLLQ-TTPEIVKRWSNEVQ 184
AIRVL +I D +L TQIERYLK A+VD+NP V+++AL+ G++L T+ +IVK+W NEV
Sbjct: 136 AIRVLSKIIDFSLATQIERYLKTAVVDRNPFVSTSALLCGLNLYNNTSSDIVKKWINEVS 195
Query: 185 EAVQSRAALVQFHALALLHQIRQNDRLAVSKLVTSLTRG--TVRSPLAQCLLIRYTTQVI 242
E + S+ ++QFHAL LL I+ D+LA+ K++ S T+ T+ S LA CLLI+Y + +I
Sbjct: 196 ECINSKHPMIQFHALTLLCSIKNQDKLALEKIINSYTKNSHTLSSSLANCLLIKYASYLI 255
Score = 419 (152.6 bits), Expect = 7.7e-125, Sum P(5) = 7.7e-125
Identities = 83/219 (37%), Positives = 132/219 (60%)
Query: 317 KSLISDQNRSXXXXXXXXXXKTGNESSVDRLMKQITNFMSDIADEFKIVVVEAIRSLCLK 376
++L+ D N+S KTGNE+S+D+L+ QI N+M+ FKI ++E +++LC
Sbjct: 444 ENLLYDNNKSICVLAFTTLLKTGNETSIDKLLNQINNYMTADNTTFKIKIIEEVKNLCFI 503
Query: 377 FPLKYRSLMNFLSNILREEGGFEYKKAIVDSIVILIRDIPDAKENGLLHLCEFIEDCEFT 436
+P K ++NFLSN LR++ +++K + +DSI+++I ++P+A+E +L LCEFIEDCE+
Sbjct: 504 YPNKCNIILNFLSNNLRDDESYQFKASTIDSIILIITNLPNAEETAILQLCEFIEDCEYH 563
Query: 437 YLSTQILHFLGTEGPKTSDPSKYIRYIYNRVHLENATVRAAAVSTLAKFGAMVDALKPRV 496
L +++ FL PKT +PSKYIRYIYNR+ LEN+T+R + L +
Sbjct: 564 ALLLKVIRFLLMHIPKTKNPSKYIRYIYNRLLLENSTIRIDGMYALFYIALKCAENSKDI 623
Query: 497 FVLLRRCLYDGDDEEPAEQPFDINSVPKEVKTQPLAEKK 535
VLL L D DDE F + +++K + K+
Sbjct: 624 LVLLNCLLADNDDEVRDRTNFFYYMLKEKIKELDTSNKQ 662
Score = 117 (46.2 bits), Expect = 7.7e-125, Sum P(5) = 7.7e-125
Identities = 31/124 (25%), Positives = 62/124 (50%)
Query: 695 YQLEDLEVVAADYVM-KV-GVSNFRNAWESI-GPDFERVDEYGLGPRESLAEAVSAVISL 751
Y + + D++ K+ F++ W+S+ + E V ++ L +++ +AV +++
Sbjct: 941 YSINPFSIQIVDFINPKILRHGEFKHIWDSMHNYNAEVVSKFSLN-FQNIQQAVVGLLNT 999
Query: 752 LGMQPCEGTEVVANNSRSHTCLLSGVFIGNVKVLVRLQFGIDGPKEVAMKLAVRSEDDNV 811
L M C+ T+ V NNS +H LLS F+ + VL + + +K+ RS + +
Sbjct: 1000 LNMVACDQTDYVENNSNNHNMLLSAQFLNDTYVLCKASLILSQQYGCLLKITCRSTNKFL 1059
Query: 812 SDMI 815
S+ I
Sbjct: 1060 SEHI 1063
Score = 107 (42.7 bits), Expect = 7.7e-125, Sum P(5) = 7.7e-125
Identities = 23/78 (29%), Positives = 43/78 (55%)
Query: 581 VELTEAETEYAVNVVKHIFDRHVVFQYNCTNTIPEQLLENVTVIVDXXXXXXXXXXXXKP 640
+ LTE+E EY V + K I+++H+V ++ NT+ EQ+L N+ V +
Sbjct: 806 IPLTESEAEYTVFLKKFIYNQHLVLEFTIHNTLSEQILSNLNVQMHSSENKWTILEKTT- 864
Query: 641 LRSLPYDSPGQIFGAFEK 658
+ +L Y++P Q++ +K
Sbjct: 865 IDNLYYNTPQQLYVILKK 882
Score = 91 (37.1 bits), Expect = 7.7e-125, Sum P(5) = 7.7e-125
Identities = 28/74 (37%), Positives = 43/74 (58%)
Query: 256 YDFLESCLRH-KAEMVIFEAARAITEL--------NGVT--NRE-LTPAITVLQLFLSSS 303
+D+L++CL++ K +++FE + I EL N T N + L I V QLFL SS
Sbjct: 354 FDYLKNCLKNNKDAIILFECIKCIFELAIYDQEGKNTTTVFNVDILNECIKVCQLFLLSS 413
Query: 304 KPVLRFAAVRTLNK 317
K V +F+ +R +NK
Sbjct: 414 KIVDKFSIIRQINK 427
Score = 45 (20.9 bits), Expect = 8.9e-09, Sum P(3) = 8.9e-09
Identities = 25/109 (22%), Positives = 41/109 (37%)
Query: 267 AEMVIFEAARAIT-ELNGVTNRELTPAITVLQLFLSSSKPVLRFAAVRTLNKSLISDQNR 325
+E IF ++T ++N + AI VL + S L R L K+ + D+N
Sbjct: 110 SEKEIFIVTSSLTKDMNSANDCYRANAIRVLSKIIDFS---LATQIERYL-KTAVVDRNP 165
Query: 326 SXXXXXXXXXXKTGNESSVDRLMKQITNFMSDIADEFKIVVVEAIRSLC 374
N +S D + K I I + ++ A+ LC
Sbjct: 166 FVSTSALLCGLNLYNNTSSDIVKKWINEVSECINSKHPMIQFHALTLLC 214
>CGD|CAL0001871 [details] [associations]
symbol:orf19.759 species:5476 "Candida albicans" [GO:0005768
"endosome" evidence=IEA] [GO:0030126 "COPI vesicle coat"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0006888 "ER
to Golgi vesicle-mediated transport" evidence=IEA] [GO:0006890
"retrograde vesicle-mediated transport, Golgi to ER" evidence=IEA]
InterPro:IPR002553 InterPro:IPR013040 InterPro:IPR014863
InterPro:IPR015873 InterPro:IPR016024 Pfam:PF01602 Pfam:PF08752
InterPro:IPR013041 CGD:CAL0001871 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192 GO:GO:0005198
SUPFAM:SSF49348 Gene3D:3.30.310.30 GO:GO:0030126 eggNOG:COG5240
Gene3D:2.60.40.1480 InterPro:IPR017106 PANTHER:PTHR10261
PIRSF:PIRSF037093 EMBL:AACQ01000123 EMBL:AACQ01000122
RefSeq:XP_713569.1 RefSeq:XP_713604.1 ProteinModelPortal:Q59VH4
STRING:Q59VH4 GeneID:3644738 GeneID:3644786 KEGG:cal:CaO19.759
KEGG:cal:CaO19.8379 Uniprot:Q59VH4
Length = 936
Score = 477 (173.0 bits), Expect = 4.1e-121, Sum P(4) = 4.1e-121
Identities = 105/233 (45%), Positives = 150/233 (64%)
Query: 317 KSLISDQNRSXXXXXXXXXXKT-----------GNESSVDRLMKQITNFMSDIADEFKIV 365
+ LI+D NRS KT G ES VDRL+ ++T+ M +I ++FKIV
Sbjct: 353 EGLINDTNRSISTLAITTLLKTMGAGTVDTGSVGGES-VDRLITKMTSLMDEITEDFKIV 411
Query: 366 VVEAIRSLCLKFPLKYRSLMNFLSNILREEGGFEYKKAIVDSIVILIRDIPDA--KENGL 423
++EAI +L LKFP K++ L++FL+++LR++G E K +IVD++ LI+ +PDA K+ L
Sbjct: 412 IIEAIENLALKFPAKHKKLVSFLTDLLRDDGTLELKSSIVDALFDLIKFLPDANAKQLIL 471
Query: 424 LHLCEFIEDCEFTYLSTQILHFLGTEGPKTSDPSKYIRYIYNRVHLENATVRAAAVSTLA 483
++LCEFIEDCEFT LS +ILH LG EGP TS+PS YIR+IYNR+ LEN+ VR++AV LA
Sbjct: 472 MNLCEFIEDCEFTELSVRILHLLGDEGPHTSNPSYYIRHIYNRLVLENSIVRSSAVIALA 531
Query: 484 KFGAMVDA-LKPRVFVLLRRCLYDGDDEEPAEQPFDINSVPKEVKTQPLAEKK 535
KF A+ + + +LL RCL D DDE +N + K +++ K
Sbjct: 532 KFAAVCGGEVSKNIVILLERCLNDVDDEVRDRAAISLNFINNGKKNLIVSDSK 584
Score = 399 (145.5 bits), Expect = 4.1e-121, Sum P(4) = 4.1e-121
Identities = 82/174 (47%), Positives = 121/174 (69%)
Query: 18 YSPFLGI-EKGAVLQEA-RVFNDPQLDPRRCSQVITKLLYLLNQGETFTKIEATEVFFAV 75
YS +GI +K AV QE + FN ++ ++C Q++ KLL L+ GE+F E+T +FF++
Sbjct: 12 YSSNVGIPDKMAVFQECLQQFNASPVNAKKCRQLLAKLLRLIYNGESFPAQESTTLFFSI 71
Query: 76 TKLFQSRDIGLRRMVYLMIKELSPSADEVIIVTSSLMKDMTSKTDMYRANAIRVLCRITD 135
+KLFQ +D LR++VYL IKELS +D++++VTSS+MKD+ +Y+ NAIR L ++ D
Sbjct: 72 SKLFQHKDQSLRQLVYLTIKELSSISDDILMVTSSIMKDIQGNDAVYKPNAIRTLSKVLD 131
Query: 136 GTLLTQIERYLKQAIVDKNPVVASAALVSGIHLLQTTPEIVKRWSNEVQEAVQS 189
T + ER K AIVDKNPV++SAAL+S +LL E+VKR++NE E +QS
Sbjct: 132 PTTVNAAERLFKNAIVDKNPVISSAALISSYNLLPHAKEVVKRFTNETLETIQS 185
Score = 293 (108.2 bits), Expect = 4.1e-121, Sum P(4) = 4.1e-121
Identities = 78/264 (29%), Positives = 137/264 (51%)
Query: 558 YEKLLSSIPEFSDFGKLFKS-SAPVELTEAETEYAVNVVKHIF--DRHVVFQYNCTNTIP 614
Y + L++I EF +GKL KS S P+ LT+ E E V+VVKH+F + +V QYN NT+P
Sbjct: 672 YAQELAAIAEFESYGKLTKSTSVPIYLTDKENEIVVSVVKHLFAESQKLVLQYNINNTLP 731
Query: 615 EQLLENVTVIVDXXXXXXXXXXXXKPLRSLPYDSPGQIFGAFEKP--EGVPAVGKFSNML 672
+L++++VI PL L D G ++ +F P E + F N +
Sbjct: 732 HTVLQDISVIAQPDNELYQEDFIV-PLAELKPDQTGIVYVSFSAPAIEDEELLSAFGNTV 790
Query: 673 RFIVKEVDPT-TXXXXXXXXXXXYQLEDLEVVAADYVMKVGVSNFRNAWESIGPDFERVD 731
+ K++D YQ++DLE++A D+++ + SNF + ++ + P+ +
Sbjct: 791 AYTNKDLDDEGNVDPTDDGWSDEYQIDDLELLAGDFIIPLYNSNFTSIFDQL-PNQDS-G 848
Query: 732 EYGLGPRESLAEAVSAVISLLGMQPCEGTEVVANNSRSHTCLLSGVFIGNVKVLVRLQFG 791
+ +++ AV+ V + L M P +G++ V ++ SHT L G + KV ++
Sbjct: 849 VVNISNVDTIENAVNKVKTALNMMPLDGSDYVPSDITSHTLKLLGKDVWGGKVGASIRLA 908
Query: 792 IDGPKEVAMKLAVRSEDDNVSDMI 815
G K VA K+ ++E +N +++I
Sbjct: 909 STGGKIVA-KVEAKTETENFANVI 931
Score = 183 (69.5 bits), Expect = 4.1e-121, Sum P(4) = 4.1e-121
Identities = 41/131 (31%), Positives = 76/131 (58%)
Query: 189 SRAALVQFHALALLHQIRQNDRLAVSKLVTSLTRGT-VRSPLAQCLLIRYTTQVIREAAT 247
S + + Q+HAL L++Q+R +D++A+ KL++SL+ G+ +++ L+ LIRY +++ +
Sbjct: 209 STSYMYQYHALGLIYQLRNHDKMALMKLISSLSEGSSLKNSLSIIQLIRYINKILND--- 265
Query: 248 TQTGDRPFYDFLESCLRHKAEMVIFEAARAITELNG-VTNRELTPAITVLQLFLSSSKPV 306
Q+ Y L L+HK++MV EA + + L + + + + LQ L +
Sbjct: 266 DQSLISHLYPILAGFLKHKSDMVELEACKTLINLQHLIKDDQFMAIVNTLQKLLGVPRTA 325
Query: 307 LRFAAVRTLNK 317
RFAA+R +NK
Sbjct: 326 TRFAAIRLINK 336
Score = 54 (24.1 bits), Expect = 1.6e-22, Sum P(2) = 1.6e-22
Identities = 16/50 (32%), Positives = 29/50 (58%)
Query: 146 LKQAIVDKNPVVASA--ALVSGIHLLQTTPEIVKRWSNEVQEAVQSRAAL 193
L+ +IV + V+A A A V G + + +++R N+V + V+ RAA+
Sbjct: 517 LENSIVRSSAVIALAKFAAVCGGEVSKNIVILLERCLNDVDDEVRDRAAI 566
Score = 42 (19.8 bits), Expect = 3.6e-59, Sum P(3) = 3.6e-59
Identities = 28/137 (20%), Positives = 45/137 (32%)
Query: 238 TTQVIREAATTQTGDRPFYDFLESCLRHKAEMVIFEAARAITELNGVTNRELTPAITVLQ 297
T Q + TQ +Y S L + M + A I +L L I+ L
Sbjct: 182 TIQSYKSFPPTQFQLHEYYGSSTSNLPSTSYMYQYHALGLIYQLRNHDKMALMKLISSLS 241
Query: 298 LFLSSSKPVLRFAAVRTLNKSLISDQNRSXXXXXXXXXXKTGNESSVD-RLMKQITNFMS 356
S + +R +NK L DQ+ V+ K + N
Sbjct: 242 EGSSLKNSLSIIQLIRYINKILNDDQSLISHLYPILAGFLKHKSDMVELEACKTLINLQH 301
Query: 357 DIADEFKIVVVEAIRSL 373
I D+ + +V ++ L
Sbjct: 302 LIKDDQFMAIVNTLQKL 318
>UNIPROTKB|D4A113 [details] [associations]
symbol:D4A113 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
InterPro:IPR002553 InterPro:IPR016024 Pfam:PF01602 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0030117
GO:GO:0016192 InterPro:IPR017106 PANTHER:PTHR10261 IPI:IPI00951430
PRIDE:D4A113 Ensembl:ENSRNOT00000014734 ArrayExpress:D4A113
Uniprot:D4A113
Length = 382
Score = 998 (356.4 bits), Expect = 1.3e-100, P = 1.3e-100
Identities = 206/382 (53%), Positives = 276/382 (72%)
Query: 5 LVKKDDDRDDEAEY--SPFLGIEKGAVLQEARVFNDPQLDPRRCSQVITKLLYLLNQGET 62
++KK D +D+E+ +PF +EK AVLQEAR+FN+ ++PRRC ++TK+LYLLNQGE
Sbjct: 1 MIKKFDKKDEESGSGSNPFQHLEKSAVLQEARIFNETPINPRRCLHILTKILYLLNQGEH 60
Query: 63 FTKIEATEVFFAVTKLFQSRDIGLRRMVYLMIKELSPSADEVIIVTSSLMKDMTSKTDMY 122
F +EATE FFA+T+LFQS D LRRM YL IKE++ +++VIIVTSSL KDMT K D+Y
Sbjct: 61 FGTMEATEAFFAMTRLFQSNDQTLRRMCYLTIKEMATISEDVIIVTSSLTKDMTGKEDVY 120
Query: 123 RANAIRVLCRITDGTLLTQIERYLKQAIVDKNPVVASAALVSGIHLLQTTPEIVKRWSNE 182
R AIR LCRITDGT+L IERY+KQAIVDK V+S+ALVS +H+++ + ++VKRW NE
Sbjct: 121 RGPAIRALCRITDGTMLQAIERYMKQAIVDKVSSVSSSALVSSLHMMKISYDVVKRWINE 180
Query: 183 VQEAVQSRAALVQFHALALLHQIRQNDRLAVSKLVTSLTRGTVRSPLAQCLLIRYTTQVI 242
QEA S +VQ+HAL +L+ +R+NDRLAVSK++ T+ ++S A C+LIR ++++
Sbjct: 181 AQEAASSDNIMVQYHALGVLYHLRKNDRLAVSKMLNKFTKSGLKSQFAYCMLIRIASRLL 240
Query: 243 REAATTQTGDRPFYDFLESCLRHKAEMVIFEAARAITELNGVTNRELTPAITVLQLFLSS 302
+E+ + P +DF+ESCLR+K EMVI+EAA AI L T REL PA++VLQLF SS
Sbjct: 241 KESEDGH--ESPLFDFIESCLRNKHEMVIYEAASAIIHLPNCTARELAPAVSVLQLFCSS 298
Query: 303 SKPVLRFAAVRTLNK-----------------SLISDQNRSXXXXXXXXXXKTGNESSVD 345
KP LR+AAVRTLNK +LI+D NRS KTG+ESSVD
Sbjct: 299 PKPALRYAAVRTLNKVAMKHPSAVTACNLDLENLITDSNRSIATLAITTLLKTGSESSVD 358
Query: 346 RLMKQITNFMSDIADEFKIVVV 367
RLMKQI++F+S+I+DEFK V++
Sbjct: 359 RLMKQISSFVSEISDEFKKVLI 380
>SGD|S000005231 [details] [associations]
symbol:SEC21 "Gamma subunit of coatomer" species:4932
"Saccharomyces cerevisiae" [GO:0030126 "COPI vesicle coat"
evidence=IEA;IDA] [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=IMP] [GO:0006890 "retrograde vesicle-mediated
transport, Golgi to ER" evidence=IMP] [GO:0003674
"molecular_function" evidence=ND] [GO:0005768 "endosome"
evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] [GO:0005798
"Golgi-associated vesicle" evidence=IEA] [GO:0030663 "COPI-coated
vesicle membrane" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0000139 "Golgi membrane" evidence=IEA]
InterPro:IPR002553 InterPro:IPR009028 InterPro:IPR013040
InterPro:IPR014863 InterPro:IPR015873 InterPro:IPR016024
Pfam:PF01602 Pfam:PF08752 InterPro:IPR013041 SGD:S000005231
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0005198 GO:GO:0005768 EMBL:BK006947
GO:GO:0006888 SUPFAM:SSF55711 SUPFAM:SSF49348 Gene3D:3.30.310.30
GO:GO:0030126 GO:GO:0006890 eggNOG:COG5240
GeneTree:ENSGT00390000016313 HOGENOM:HOG000184434
Gene3D:2.60.40.1480 InterPro:IPR017106 PANTHER:PTHR10261
PIRSF:PIRSF037093 OMA:KETEEGH OrthoDB:EOG4FFH8X EMBL:M59708
EMBL:Z71563 PIR:S63261 RefSeq:NP_014112.1 ProteinModelPortal:P32074
SMR:P32074 DIP:DIP-1611N IntAct:P32074 MINT:MINT-399140
STRING:P32074 PaxDb:P32074 PeptideAtlas:P32074 EnsemblFungi:YNL287W
GeneID:855429 KEGG:sce:YNL287W CYGD:YNL287w NextBio:979304
Genevestigator:P32074 GermOnline:YNL287W Uniprot:P32074
Length = 935
Score = 457 (165.9 bits), Expect = 8.3e-97, Sum P(3) = 8.3e-97
Identities = 85/197 (43%), Positives = 134/197 (68%)
Query: 317 KSLISDQNRSXXXXXXXXXXKTGNESSVDRLMKQITNFMSDIADEFKIVVVEAIRSLCLK 376
+SLI+D NR+ KTG ++ L+ ITNF+ D++D+FKI++++A+R+L L
Sbjct: 348 ESLINDSNRNISTYAITTLLKTGTSKNISSLISTITNFIHDVSDDFKIIIIDAVRTLSLN 407
Query: 377 FPLKYRSLMNFLSNILRE-EGGFEYKKAIVDSIVILIRDIPDAKENGLLHLCEFIEDCEF 435
FP +++S++NFL ++L+ EGGF++K +IV++++ ++ +P +KE L +LC+FIEDCEF
Sbjct: 408 FPQEWKSILNFLIDVLKNSEGGFKFKNSIVEALIDIVSFVPQSKELALENLCDFIEDCEF 467
Query: 436 TYLSTQILHFLGTEGPKTSDPSKYIRYIYNRVHLENATVRAAAVSTLAKFGAMVD--ALK 493
+ +ILH LG EGP +PS Y+R+IYNRV LEN+ +R+AAV L+KF + L
Sbjct: 468 NEILVRILHLLGKEGPSAPNPSLYVRHIYNRVVLENSIIRSAAVVALSKFALTKNDPTLY 527
Query: 494 PRVFVLLRRCLYDGDDE 510
+ LL+R D DDE
Sbjct: 528 ESIISLLKRIANDKDDE 544
Score = 372 (136.0 bits), Expect = 8.3e-97, Sum P(3) = 8.3e-97
Identities = 95/287 (33%), Positives = 159/287 (55%)
Query: 25 EKGAVLQEA-RVFNDPQLDPRRCSQVITKLLYLLNQGETFTKIEATEVFFAVTKLFQSRD 83
+K + Q+ FN+ ++ +RC +I++LL LL QGETF + EAT +FF+++KLFQ ++
Sbjct: 19 DKMTIYQDCMNTFNESPVNSKRCRLLISRLLRLLAQGETFPQNEATALFFSISKLFQHQN 78
Query: 84 IGLRRMVYLMIKELSPSADEVIIVTSSLMKDMTSKTDMYRANAIRVLCRITDGTLLTQIE 143
LR+ VYL IKELS +++V++ TSS+MKD+ + +D+ + +AIR L + D + E
Sbjct: 79 DPLRQAVYLAIKELSGISEDVLMATSSIMKDVQNGSDLIKPDAIRSLTYVLDESTAFSAE 138
Query: 144 RYLKQAIVDKNPVVASAALVSGIHLLQTTPEIVKRWSNEVQEAV---------------- 187
R LK A+V ++P ++SAAL + HLL + ++R++NE QEAV
Sbjct: 139 RLLKSAVVSRHPSISSAALCTSYHLLPISEVTIRRFTNETQEAVLDLKQFPNQHGNSEYY 198
Query: 188 QSRAALVQFHALALLHQIRQNDRLAVSKLVTSLTRGTVRSPLAQCLLIRYTTQVIREAAT 247
+ + Q+HAL LL+Q+++ D++A+ KLV + S Q + +++ +
Sbjct: 199 PNSTYISQYHALGLLYQLKKTDKMALLKLVRHFSENN--SMKNQLAKVELV-KIVNDLIY 255
Query: 248 TQTG-DRPFYDFLESCLRHKAEMVIFEAARAITELNGVTNRELTPAI 293
F L L +K E V E A+ IT +R + P +
Sbjct: 256 RDPQLFSQFRPLLSDWLSNKFESVQLETAKLITSFATRNSRLVAPEL 302
Score = 256 (95.2 bits), Expect = 8.3e-97, Sum P(3) = 8.3e-97
Identities = 86/309 (27%), Positives = 141/309 (45%)
Query: 519 INSVPKEVKTQPLAEKKAPGKMXXXXXXXXXXXXXTVDAYEKLLSSIPEFSDFGKLFKSS 578
+++ P E ++ P EK+A Y L SI + FG+L SS
Sbjct: 635 LDTTP-EAESVP--EKRADANSFAGPNLDDHQEDLLATKYADELLSIEQIKPFGQLVNSS 691
Query: 579 APVELTEAETEYAVNVVKHIFDRHVVFQYNCTNTIPEQLLENVTVIVDXXXXXXXXXXXX 638
+ LTE E E+ V VKH+F +VV Q+N TNT+ + L+NV+V+
Sbjct: 692 RAISLTEPEAEFVVRGVKHLFKDNVVLQFNITNTLTDIALDNVSVVCTPEISDEAELEEL 751
Query: 639 KPL---RSLPYDSPGQIFGAFEKPEGVPAVGKFSNMLRFIVKEVDPTTXX--XXXXXXXX 693
L R LP + + AF+K + + G F N L F KE++P T
Sbjct: 752 FTLQVDRLLPSEEAA-CYVAFKKLDEIVMEG-FLNNLTFTTKEINPDTNEPFDGDEGFQD 809
Query: 694 XYQLEDLEVVAADYVMKVGVSNFRNAWESIGPDFERVDEYGLGPRESLAEAVSAVISLLG 753
Y+++ + + A DYV NF ++ + P E V + + S+ E V +I
Sbjct: 810 EYEIDSIFLNAGDYVKSSFTGNFSATFDEL-P-CEEVAVFNIQEDLSIQEVVDKIILNSS 867
Query: 754 MQPCEGTEVVANNSRSHTCLLSG--VFIGNVKVLVRLQFGIDGPKEVAMKLAVRSEDDNV 811
P E T+ ++S SHT L G G+ KV ++++ I K +A+K+ + ED +
Sbjct: 868 CLPVESTQFAPSDSNSHTLKLFGKSALTGS-KVALQIKM-IKSSKGLALKVHGKGEDSLL 925
Query: 812 -SDMIHEIV 819
SD+++ ++
Sbjct: 926 CSDLVNGLM 934
Score = 142 (55.0 bits), Expect = 1.2e-72, Sum P(3) = 1.2e-72
Identities = 43/136 (31%), Positives = 73/136 (53%)
Query: 195 QFHALALLHQIRQNDRLAVSKLVTSLTRG-TVRSPLAQCLLIRYTTQVIREAATTQTGDR 253
Q+HAL LL+Q+++ D++A+ KLV + ++++ LA+ L++ +I + R
Sbjct: 206 QYHALGLLYQLKKTDKMALLKLVRHFSENNSMKNQLAKVELVKIVNDLIYRDPQLFSQFR 265
Query: 254 PFYDFLESCLRHKAEMVIFEAARAITELNGVTNRELTP-----AITVLQLFLSSSKPVLR 308
P L L +K E V E A+ IT +R + P AI+ LQ L+ + R
Sbjct: 266 PL---LSDWLSNKFESVQLETAKLITSFATRNSRLVAPELYAAAISALQSLLTVPRVSSR 322
Query: 309 FAAVRTLNK-SLISDQ 323
FAA+R LN+ S++S +
Sbjct: 323 FAALRILNRISMVSPE 338
Score = 60 (26.2 bits), Expect = 4.1e-19, Sum P(2) = 4.1e-19
Identities = 22/85 (25%), Positives = 40/85 (47%)
Query: 144 RYLKQAIVDKNPVVASAALV--SGIHLLQTTP-------EIVKRWSNEVQEAVQSRAALV 194
R++ +V +N ++ SAA+V S L + P ++KR +N+ + V+ RA +
Sbjct: 493 RHIYNRVVLENSIIRSAAVVALSKFALTKNDPTLYESIISLLKRIANDKDDEVRDRATI- 551
Query: 195 QFHALALLHQIRQNDRLAVSKLVTS 219
AL + R D + L+ S
Sbjct: 552 ---ALEFIDSARNKDDVIAQNLIES 573
Score = 38 (18.4 bits), Expect = 8.0e-17, Sum P(2) = 8.0e-17
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 343 SVDRLMKQITNFMSDIADEFKIVVVEAIRSL 373
S D LM ++ M D+ + ++ +AIRSL
Sbjct: 96 SEDVLMAT-SSIMKDVQNGSDLIKPDAIRSL 125
Score = 37 (18.1 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
Identities = 14/73 (19%), Positives = 31/73 (42%)
Query: 160 AALVSGIHLLQTTPEIVKRWS-----NEVQEAVQSRAALVQFHALALLHQIRQNDRLAVS 214
AA +S + L T P + R++ N + + + +L++ +N ++
Sbjct: 304 AAAISALQSLLTVPRVSSRFAALRILNRISMVSPEKIVVCNPELESLINDSNRN--ISTY 361
Query: 215 KLVTSLTRGTVRS 227
+ T L GT ++
Sbjct: 362 AITTLLKTGTSKN 374
>UNIPROTKB|F1SPF9 [details] [associations]
symbol:COPG1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0030126 "COPI
vesicle coat" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR002553 InterPro:IPR009028
InterPro:IPR013040 InterPro:IPR014863 InterPro:IPR015873
InterPro:IPR016024 Pfam:PF01602 Pfam:PF08752 InterPro:IPR013041
GO:GO:0005634 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0016192 GO:GO:0005198 SUPFAM:SSF55711
SUPFAM:SSF49348 Gene3D:3.30.310.30 GO:GO:0030126
GeneTree:ENSGT00390000016313 Gene3D:2.60.40.1480 InterPro:IPR017106
PANTHER:PTHR10261 EMBL:CU928115 Ensembl:ENSSSCT00000012713
OMA:LAPAVSX Uniprot:F1SPF9
Length = 467
Score = 545 (196.9 bits), Expect = 6.0e-93, Sum P(2) = 6.0e-93
Identities = 119/308 (38%), Positives = 174/308 (56%)
Query: 511 EPAEQPFDINSVPKEVKTQPLAEKKAPGKMXXXXXXXXXXXXXTVDAYEKLLSSIPEFSD 570
EP+E+PFD+ SVP + T P+AE++ + +++ L+++PEF
Sbjct: 161 EPSEKPFDLKSVP--LATTPMAEQRTESTPITAAKQPEKVAATRQEIFQEQLAAVPEFQG 218
Query: 571 FGKLFKSSA-PVELTEAETEYAVNVVKHIFDRHVVFQYNCTNTIPEQLLENVTVIVDXXX 629
G LFKSS PV LTE+ETEY + KH F H+VFQ++CTNT+ +Q LENVTV ++
Sbjct: 219 LGPLFKSSPEPVALTESETEYVIRCTKHTFTNHMVFQFDCTNTLNDQTLENVTVQMEPTE 278
Query: 630 XXXXXXXXXKPLRSLPYDSPGQIFGAFEKPEGVP-AVG-KFSNMLRFIVKEVDPTTXXXX 687
P RSLPY+ PG + P+ P AV FS M++F VK+ DPTT
Sbjct: 279 AYEVLCYV--PARSLPYNQPGTCYTLVALPKEDPTAVACTFSCMMKFTVKDCDPTTGETD 336
Query: 688 XXXXXXXYQLEDLEVVAADYVMKVGVSNFRNAWESIGPDFERVDEYGLGPRESLAEAVSA 747
Y LEDLEV AD++ KV NF AW+ +G +FE+ + + L ++L EAV
Sbjct: 337 DEGYEDEYVLEDLEVTIADHIQKVMKLNFEAAWDEVGDEFEKEETFTLSTIKTLEEAVGN 396
Query: 748 VISLLGMQPCEGTEVVANNSRSHTCLLSGVFIGNVKVLVRLQFGIDGPKEVAMKLAVRSE 807
++ LGM PCE ++ V +N +HT LL+GVF G +LVR + + V M++ RS
Sbjct: 397 IVKFLGMHPCERSDKVPDNKNTHTLLLAGVFRGGHDILVRSRLLL--LDTVTMQVTARSS 454
Query: 808 DDNVSDMI 815
++ D++
Sbjct: 455 EELPVDIV 462
Score = 401 (146.2 bits), Expect = 6.0e-93, Sum P(2) = 6.0e-93
Identities = 77/133 (57%), Positives = 100/133 (75%)
Query: 395 EGGFEYKKAIVDSIVILIRDIPDAKENGLLHLCEFIEDCEFTYLSTQILHFLGTEGPKTS 454
+GGFEYK+AIVD I+ +I + ++KE GL HLCEFIEDCEFT L+T+ILH LG EGPKT+
Sbjct: 1 QGGFEYKRAIVDCIISIIEENAESKETGLSHLCEFIEDCEFTVLATRILHLLGQEGPKTN 60
Query: 455 DPSKYIRYIYNRVHLENATVRAAAVSTLAKFGAMVDALKPRVFVLLRRCLYDGDDEEPAE 514
+PSKYIR+IYNRV LE+ VRA AVS LAKFGA + + P + VLL+RC+ D D+E
Sbjct: 61 NPSKYIRFIYNRVVLEHEEVRAGAVSALAKFGAQNEEMLPSILVLLKRCVMDDDNEVRDR 120
Query: 515 QPFDINSVPKEVK 527
F +N + ++ K
Sbjct: 121 ATFYLNVLEQKQK 133
Score = 38 (18.4 bits), Expect = 1.1e-54, Sum P(2) = 1.1e-54
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 263 LRHKAEMVIFEAARAITELNGVTNRELTPAITVL 296
L H E V A A+ + G N E+ P+I VL
Sbjct: 75 LEH--EEVRAGAVSALAKF-GAQNEEMLPSILVL 105
>UNIPROTKB|F6X838 [details] [associations]
symbol:COPG2 "Coatomer subunit gamma-2" species:9606 "Homo
sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
InterPro:IPR002553 InterPro:IPR016024 Pfam:PF01602 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0030117
GO:GO:0016192 EMBL:AC007938 InterPro:IPR017106 PANTHER:PTHR10261
EMBL:AC009274 IPI:IPI00002557 HGNC:HGNC:2237 EMBL:AC144863
EMBL:AC145213 EMBL:AC145656 SMR:F6X838 Ensembl:ENST00000330992
Ensembl:ENST00000445977 OMA:RINSAPH Uniprot:F6X838
Length = 246
Score = 691 (248.3 bits), Expect = 4.4e-68, P = 4.4e-68
Identities = 134/242 (55%), Positives = 184/242 (76%)
Query: 5 LVKKDDDRDDEAEY--SPFLGIEKGAVLQEARVFNDPQLDPRRCSQVITKLLYLLNQGET 62
++KK D +D+E+ +PF +EK AVLQEAR+FN+ ++PRRC ++TK+LYLLNQGE
Sbjct: 1 MIKKFDKKDEESGSGSNPFQHLEKSAVLQEARIFNETPINPRRCLHILTKILYLLNQGEH 60
Query: 63 FTKIEATEVFFAVTKLFQSRDIGLRRMVYLMIKELSPSADEVIIVTSSLMKDMTSKTDMY 122
F EATE FFA+T+LFQS D LRRM YL IKE++ +++VIIVTSSL KDMT K D+Y
Sbjct: 61 FGTTEATEAFFAMTRLFQSNDQTLRRMCYLTIKEMATISEDVIIVTSSLTKDMTGKEDVY 120
Query: 123 RANAIRVLCRITDGTLLTQIERYLKQAIVDKNPVVASAALVSGIHLLQTTPEIVKRWSNE 182
R AIR LCRITDGT+L IERY+KQAIVDK V+S+ALVS +H+++ + ++VKRW NE
Sbjct: 121 RGPAIRALCRITDGTMLQAIERYMKQAIVDKVSSVSSSALVSSLHMMKISYDVVKRWINE 180
Query: 183 VQEAVQSRAALVQFHALALLHQIRQNDRLAVSKLVTSLTRGTVRSPLAQCLLIRYTTQVI 242
QEA S +VQ+HAL +L+ +R+NDRLAVSK++ T+ ++S A C+LIR ++++
Sbjct: 181 AQEAASSDNIMVQYHALGVLYHLRKNDRLAVSKMLNKFTKSGLKSQFAYCMLIRIASRLL 240
Query: 243 RE 244
+E
Sbjct: 241 KE 242
>UNIPROTKB|H0Y8X7 [details] [associations]
symbol:COPG1 "Coatomer subunit gamma-1" species:9606 "Homo
sapiens" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030126
"COPI vesicle coat" evidence=IEA] InterPro:IPR009028
InterPro:IPR013040 InterPro:IPR014863 InterPro:IPR015873
Pfam:PF08752 InterPro:IPR013041 GO:GO:0006886 GO:GO:0016192
GO:GO:0005198 SUPFAM:SSF55711 SUPFAM:SSF49348 Gene3D:3.30.310.30
GO:GO:0030126 Gene3D:2.60.40.1480 InterPro:IPR017106
PANTHER:PTHR10261 HGNC:HGNC:2236 ChiTaRS:COPG1 EMBL:AC137695
Ensembl:ENST00000509889 Uniprot:H0Y8X7
Length = 188
Score = 306 (112.8 bits), Expect = 3.0e-26, P = 3.0e-26
Identities = 69/177 (38%), Positives = 101/177 (57%)
Query: 641 LRSLPYDSPGQIFGAFEKPEGVP-AVG-KFSNMLRFIVKEVDPTTXXXXXXXXXXXYQLE 698
+RSLPY+ PG + P+ P AV FS M++F VK+ DPTT Y LE
Sbjct: 9 MRSLPYNQPGTCYTLVALPKEDPTAVACTFSCMMKFTVKDCDPTTGETDDEGYEDEYVLE 68
Query: 699 DLEVVAADYVMKVGVSNFRNAWESIGPDFERVDEYGLGPRESLAEAVSAVISLLGMQPCE 758
DLEV AD++ KV NF AW+ +G +FE+ + + L ++L EAV ++ LGM PCE
Sbjct: 69 DLEVTVADHIQKVMKLNFEAAWDEVGDEFEKEETFTLSTIKTLEEAVGNIVKFLGMHPCE 128
Query: 759 GTEVVANNSRSHTCLLSGVFIGNVKVLVRLQFGIDGPKEVAMKLAVRSEDDNVSDMI 815
++ V +N +HT LL+GVF G +LVR + + V M++ RS ++ D+I
Sbjct: 129 RSDKVPDNKNTHTLLLAGVFRGGHDILVRSRLLL--LDTVTMQVTARSLEELPVDII 183
>UNIPROTKB|H7C1T7 [details] [associations]
symbol:COPG2 "Coatomer subunit gamma-2" species:9606 "Homo
sapiens" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030126
"COPI vesicle coat" evidence=IEA] InterPro:IPR009028
InterPro:IPR013040 InterPro:IPR014863 InterPro:IPR015873
Pfam:PF08752 InterPro:IPR013041 GO:GO:0006886 GO:GO:0016192
GO:GO:0005198 SUPFAM:SSF55711 SUPFAM:SSF49348 Gene3D:3.30.310.30
GO:GO:0030126 EMBL:AC007938 Gene3D:2.60.40.1480 InterPro:IPR017106
PANTHER:PTHR10261 EMBL:AC009274 HGNC:HGNC:2237 EMBL:AC144863
EMBL:AC145213 EMBL:AC145656 ProteinModelPortal:H7C1T7
Ensembl:ENST00000425248 Uniprot:H7C1T7
Length = 155
Score = 277 (102.6 bits), Expect = 3.9e-23, P = 3.9e-23
Identities = 59/151 (39%), Positives = 88/151 (58%)
Query: 666 GKFSNMLRFIVKEVDPTTXXXXXXXXXXXYQLEDLEVVAADYVMKVGVSNFRNAWESIGP 725
G FS ++F V++ DP T Y LEDLEV +D++ KV NF AWE +G
Sbjct: 3 GSFSCTMKFTVRDCDPNTGVPDEDGYDDEYVLEDLEVTVSDHIQKVLKPNFAAAWEEVGD 62
Query: 726 DFERVDEYGLGPRESLAEAVSAVISLLGMQPCEGTEVVANNSRSHTCLLSGVFIGNVKVL 785
FE+ + + L ++L EAV+ +I+ LGMQPCE ++ V N SH+ L+G+F G +L
Sbjct: 63 TFEKEETFALSSTKTLEEAVNNIITFLGMQPCERSDKVPENKNSHSLYLAGIFRGGYDLL 122
Query: 786 VRLQFGI-DGPKEVAMKLAVRSEDDNVSDMI 815
VR + + DG V M++ VRS++ D+I
Sbjct: 123 VRSRLALADG---VTMQVTVRSKERTPVDVI 150
>GENEDB_PFALCIPARUM|PFE1400c [details] [associations]
symbol:PFE1400c "beta adaptin protein, putative"
species:5833 "Plasmodium falciparum" [GO:0016192 "vesicle-mediated
transport" evidence=ISS] InterPro:IPR002553 InterPro:IPR009028
InterPro:IPR013037 InterPro:IPR015151 InterPro:IPR016024
InterPro:IPR016342 InterPro:IPR026739 Pfam:PF01602 Pfam:PF09066
PIRSF:PIRSF002291 SMART:SM01020 InterPro:IPR013041 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
GO:GO:0008565 HOGENOM:HOG000163270 GO:GO:0030131
Gene3D:2.60.40.1150 Gene3D:3.30.310.10 InterPro:IPR012295
PANTHER:PTHR11134 SUPFAM:SSF55711 SUPFAM:SSF49348 EMBL:AL844504
RefSeq:XP_001351835.2 ProteinModelPortal:Q8I3I6 IntAct:Q8I3I6
MINT:MINT-1744951 PRIDE:Q8I3I6 EnsemblProtists:PFE1400c:mRNA
GeneID:813094 KEGG:pfa:PFE1400c EuPathDB:PlasmoDB:PF3D7_0528100
ProtClustDB:CLSZ2433409 Uniprot:Q8I3I6
Length = 929
Score = 132 (51.5 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 56/284 (19%), Positives = 129/284 (45%)
Query: 48 QVITKLLYLLNQGETFTKIEATEVFFAVTKLFQSRDIGLRRMVYLMIKELSPSADEV-II 106
+ I K++ + G+ + + +F V Q+ +I L+++VYL + + E+ I+
Sbjct: 32 EAIKKIIAAMTVGK-----DVSTLFSDVVNCMQTSNIELKKLVYLYVINYAKVQPELAIL 86
Query: 107 VTSSLMKDMTSKTDMYRANAIRVLCRITDGTLLTQIERYLKQAIVDKNPVVASAALVSGI 166
++ KD + + RA AIR + I + + L++ + D++P V A++
Sbjct: 87 AVNTFRKDSSDPNPLIRALAIRTMGCIRLEQITEYLIEPLRRCLKDEDPYVRKTAVICIA 146
Query: 167 HLLQTTPEIVKR--WSNEVQEAVQSRAALVQFHALALLHQIRQNDRLAVSKLVTSLTRGT 224
L +P++V+ + + + + + A+V +A+ L I +N ++ K V +
Sbjct: 147 KLYDISPKLVEEEGFIDTLLDILDDNNAMVVANAVISLTDICENSNKSILKDVINKDENN 206
Query: 225 VR---SPLAQCL----LIRYTTQVIREAATTQTGDRPFYDFLESCLRHKAEMVIFEAARA 277
V + + +C+ + V+ E T++ +R L L H V+ + +
Sbjct: 207 VNKLLNAINECVEWGQVFILDALVLYEPKTSKDAERVLERILPR-LSHANSAVVLSSIKV 265
Query: 278 IT-ELNGVTNRELTPAI----TVLQLFLSSSKPVLRFAAVRTLN 316
I L+ + ++E + + + L S++P +++ A+R +N
Sbjct: 266 ILCLLDKINDKEFIKNVHKKLSPSLVTLLSAEPEIQYIALRNIN 309
Score = 87 (35.7 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 23/108 (21%), Positives = 53/108 (49%)
Query: 340 NESSVDRLMKQITNFMSDIADEFKIVVVEAIRSLCLKFPLKYRSLMNFLSNILREEGGFE 399
++ +VD ++ ++ + +++ EF V AI S +K P +N L +++ + +
Sbjct: 349 SDKNVDLVLYELKEYSTEVDVEFVKKSVRAIGSCAIKLPQSSEKCINILLDLIDTKINYV 408
Query: 400 YKKAIVDSIVILIRDIPDAKENGLLHLCEFIEDCEFTYLSTQILHFLG 447
++ IV I + R P+ E+ + LCE +E + + ++ +G
Sbjct: 409 IQECIV-VIKDIFRKYPNKYESIITILCENLESLDESNAKASLIWIIG 455
Score = 50 (22.7 bits), Expect = 9.0e-05, Sum P(2) = 9.0e-05
Identities = 18/72 (25%), Positives = 32/72 (44%)
Query: 353 NFMSDIAD-EFKIVVVEAI---RSLCLKFPLKYRSLMNFLSNILREEGGFEYKKAIVDSI 408
N + D+ D + V+ E I + + K+P KY S++ L L K +++ I
Sbjct: 395 NILLDLIDTKINYVIQECIVVIKDIFRKYPNKYESIITILCENLESLDESNAKASLIWII 454
Query: 409 VILIRDIPDAKE 420
+ I +A E
Sbjct: 455 GEYVERIDNADE 466
>UNIPROTKB|Q8I3I6 [details] [associations]
symbol:PFE1400c "Beta adaptin protein, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0016192
"vesicle-mediated transport" evidence=ISS] InterPro:IPR002553
InterPro:IPR009028 InterPro:IPR013037 InterPro:IPR015151
InterPro:IPR016024 InterPro:IPR016342 InterPro:IPR026739
Pfam:PF01602 Pfam:PF09066 PIRSF:PIRSF002291 SMART:SM01020
InterPro:IPR013041 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0016192 GO:GO:0008565 HOGENOM:HOG000163270
GO:GO:0030131 Gene3D:2.60.40.1150 Gene3D:3.30.310.10
InterPro:IPR012295 PANTHER:PTHR11134 SUPFAM:SSF55711
SUPFAM:SSF49348 EMBL:AL844504 RefSeq:XP_001351835.2
ProteinModelPortal:Q8I3I6 IntAct:Q8I3I6 MINT:MINT-1744951
PRIDE:Q8I3I6 EnsemblProtists:PFE1400c:mRNA GeneID:813094
KEGG:pfa:PFE1400c EuPathDB:PlasmoDB:PF3D7_0528100
ProtClustDB:CLSZ2433409 Uniprot:Q8I3I6
Length = 929
Score = 132 (51.5 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 56/284 (19%), Positives = 129/284 (45%)
Query: 48 QVITKLLYLLNQGETFTKIEATEVFFAVTKLFQSRDIGLRRMVYLMIKELSPSADEV-II 106
+ I K++ + G+ + + +F V Q+ +I L+++VYL + + E+ I+
Sbjct: 32 EAIKKIIAAMTVGK-----DVSTLFSDVVNCMQTSNIELKKLVYLYVINYAKVQPELAIL 86
Query: 107 VTSSLMKDMTSKTDMYRANAIRVLCRITDGTLLTQIERYLKQAIVDKNPVVASAALVSGI 166
++ KD + + RA AIR + I + + L++ + D++P V A++
Sbjct: 87 AVNTFRKDSSDPNPLIRALAIRTMGCIRLEQITEYLIEPLRRCLKDEDPYVRKTAVICIA 146
Query: 167 HLLQTTPEIVKR--WSNEVQEAVQSRAALVQFHALALLHQIRQNDRLAVSKLVTSLTRGT 224
L +P++V+ + + + + + A+V +A+ L I +N ++ K V +
Sbjct: 147 KLYDISPKLVEEEGFIDTLLDILDDNNAMVVANAVISLTDICENSNKSILKDVINKDENN 206
Query: 225 VR---SPLAQCL----LIRYTTQVIREAATTQTGDRPFYDFLESCLRHKAEMVIFEAARA 277
V + + +C+ + V+ E T++ +R L L H V+ + +
Sbjct: 207 VNKLLNAINECVEWGQVFILDALVLYEPKTSKDAERVLERILPR-LSHANSAVVLSSIKV 265
Query: 278 IT-ELNGVTNRELTPAI----TVLQLFLSSSKPVLRFAAVRTLN 316
I L+ + ++E + + + L S++P +++ A+R +N
Sbjct: 266 ILCLLDKINDKEFIKNVHKKLSPSLVTLLSAEPEIQYIALRNIN 309
Score = 87 (35.7 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 23/108 (21%), Positives = 53/108 (49%)
Query: 340 NESSVDRLMKQITNFMSDIADEFKIVVVEAIRSLCLKFPLKYRSLMNFLSNILREEGGFE 399
++ +VD ++ ++ + +++ EF V AI S +K P +N L +++ + +
Sbjct: 349 SDKNVDLVLYELKEYSTEVDVEFVKKSVRAIGSCAIKLPQSSEKCINILLDLIDTKINYV 408
Query: 400 YKKAIVDSIVILIRDIPDAKENGLLHLCEFIEDCEFTYLSTQILHFLG 447
++ IV I + R P+ E+ + LCE +E + + ++ +G
Sbjct: 409 IQECIV-VIKDIFRKYPNKYESIITILCENLESLDESNAKASLIWIIG 455
Score = 50 (22.7 bits), Expect = 9.0e-05, Sum P(2) = 9.0e-05
Identities = 18/72 (25%), Positives = 32/72 (44%)
Query: 353 NFMSDIAD-EFKIVVVEAI---RSLCLKFPLKYRSLMNFLSNILREEGGFEYKKAIVDSI 408
N + D+ D + V+ E I + + K+P KY S++ L L K +++ I
Sbjct: 395 NILLDLIDTKINYVIQECIVVIKDIFRKYPNKYESIITILCENLESLDESNAKASLIWII 454
Query: 409 VILIRDIPDAKE 420
+ I +A E
Sbjct: 455 GEYVERIDNADE 466
>UNIPROTKB|G3X7G4 [details] [associations]
symbol:AP2B1 "AP-2 complex subunit beta" species:9913 "Bos
taurus" [GO:0030117 "membrane coat" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0008565 "protein
transporter activity" evidence=IEA] [GO:0006886 "intracellular
protein transport" evidence=IEA] InterPro:IPR002553
InterPro:IPR016024 InterPro:IPR016342 InterPro:IPR026739
Pfam:PF01602 PIRSF:PIRSF002291 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0030117 GO:GO:0016192
GO:GO:0008565 PANTHER:PTHR11134 GeneTree:ENSGT00530000063138
OMA:YDISATM EMBL:DAAA02048460 Ensembl:ENSBTAT00000027078
Uniprot:G3X7G4
Length = 598
Score = 131 (51.2 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 63/306 (20%), Positives = 133/306 (43%)
Query: 25 EKGAVLQEARVFNDPQLDPRRCSQVITKLLYLLNQGETFTKIEATEVFFAVTKLFQSRDI 84
+KG + + N+ + + R+ + + K++ + G+ + + +F V Q+ ++
Sbjct: 11 KKGEIFELKAELNNEKKEKRK--EAVKKVIAAMTVGK-----DVSSLFPDVVNCMQTDNL 63
Query: 85 GLRRMVYLMIKELSPSA-DEVIIVTSSLMKDMTSKTDMYRANAIRVLCRITDGTLLTQIE 143
L+++VYL + + S D I+ +S +KD + RA A+R + I + +
Sbjct: 64 ELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLC 123
Query: 144 RYLKQAIVDKNPVVASAALVSGIHLLQTTPEIVKR--WSNEVQEAVQSRAALVQFHALAL 201
L++ + D++P V A V L ++V+ + + +++ + +V +A+A
Sbjct: 124 EPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANAVAA 183
Query: 202 LHQIRQ---NDRLA------VSKLVTSLTRGTVRSPL--AQCLLIRYTTQVIREAATTQT 250
L +I + N L ++KL+T+L T + CL Y + REA +
Sbjct: 184 LSEISESHPNSNLLDLNPQNINKLLTALNECTEWGQIFILDCLS-NYNPKDDREAQSICE 242
Query: 251 GDRPFYDFLESCLRHKAEMVIFEAARAITELNGVTNRELTPAITVLQLFLSSSKPVLRFA 310
P S + A V+ + + + + N L L LS +P +++
Sbjct: 243 RVTPRLSHANSAVVLSAVKVLMKFLELLPKESDYYNMLLKKLAPPLVTLLSG-EPEVQYV 301
Query: 311 AVRTLN 316
A+R +N
Sbjct: 302 ALRNIN 307
Score = 73 (30.8 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 21/148 (14%), Positives = 67/148 (45%)
Query: 337 KTGNESSVDRLMKQITNFMSDIADEFKIVVVEAIRSLCLKFPLKYRSLMNFLSNILREEG 396
+ +++++ +++ ++ + +++ +F V AI +K ++ L ++++ +
Sbjct: 344 RLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKV 403
Query: 397 GFEYKKAIVDSIVILIRDIPDAKENGLLHLCEFIEDCEFTYLSTQILHFLGTEGPKTSDP 456
+ ++AIV I + R P+ E+ + LCE ++ + ++ +G + +
Sbjct: 404 NYVVQEAIV-VIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERIDNA 462
Query: 457 SKYIRYIYNRVHLENATVRAAAVSTLAK 484
+ + H E+ V+ ++ + K
Sbjct: 463 DELLESFLEGFHDESTQVQLTLLTAIVK 490
>DICTYBASE|DDB_G0279141 [details] [associations]
symbol:ap1b1 "beta adaptin" species:44689
"Dictyostelium discoideum" [GO:0030131 "clathrin adaptor complex"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0006897 "endocytosis"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0030665 "clathrin-coated
vesicle membrane" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR002553 InterPro:IPR008152 InterPro:IPR009028
InterPro:IPR013037 InterPro:IPR015151 InterPro:IPR016024
InterPro:IPR016342 InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883
Pfam:PF09066 PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020
InterPro:IPR013041 dictyBase:DDB_G0279141 GO:GO:0005794
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GenomeReviews:CM000152_GR GO:GO:0008565
GO:GO:0006897 EMBL:AAFI02000027 eggNOG:COG5096 GO:GO:0030131
GO:GO:0030665 Gene3D:2.60.40.1150 Gene3D:3.30.310.10
InterPro:IPR012295 PANTHER:PTHR11134 SUPFAM:SSF55711
SUPFAM:SSF49348 KO:K12392 RefSeq:XP_641846.1 HSSP:P63010
ProteinModelPortal:Q54X82 SMR:Q54X82 STRING:Q54X82 PRIDE:Q54X82
EnsemblProtists:DDB0234067 GeneID:8621892 KEGG:ddi:DDB_G0279141
OMA:SDPNPLI ProtClustDB:CLSZ2735785 Uniprot:Q54X82
Length = 942
Score = 127 (49.8 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 56/266 (21%), Positives = 114/266 (42%)
Query: 67 EATEVFFAVTKLFQSRDIGLRRMVYLMIKELSPS-ADEVIIVTSSLMKDMTSKTDMYRAN 125
+ + +F V Q+ ++ L+++VYL + + + D I+ ++ KD + + RA
Sbjct: 46 DVSMLFTHVLNCMQTHNLELKKLVYLYVMNYAKNHPDRAILAVNTFQKDASDPNPLIRAL 105
Query: 126 AIRVLCRITDGTLLTQIERYLKQAIVDKNPVVASAALVSGIHLLQTTPEIVKR--WSNEV 183
A+R + I + + L+ A+ D++P V A V L PE+V+ + N +
Sbjct: 106 AVRTMGCIRVDNITEHLCEPLRHALKDQDPYVRKTAAVCVAKLYDVNPELVENQGFLNIL 165
Query: 184 QEAVQSRAALVQFHALALLHQIRQNDRLAVSKLVTSLTRGTVRSPLAQCL---------- 233
+ + +V +A+A L +I + + V + + S + + L +C
Sbjct: 166 NDLLGDSNPMVVANAVASLTEIDEVSKKEVFR-IHSGNLNKLLAALNECTEWGQVFILNS 224
Query: 234 LIRYTTQVIREAATTQTGDRPFYDFLESCLRHKAEMVIFEAARAITELNGVTN---RELT 290
L +YT + +EA P S + A V+ + +I N V +++
Sbjct: 225 LCKYTPRDSQEAENVCERVAPRLQHANSAVVLSAVKVLMKYMNSIGN-NDVIRLFCKKMA 283
Query: 291 PAITVLQLFLSSSKPVLRFAAVRTLN 316
P + L S +P ++F +R +N
Sbjct: 284 PPLVTLL----SKEPEIQFLGLRNIN 305
Score = 79 (32.9 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 24/145 (16%), Positives = 62/145 (42%)
Query: 340 NESSVDRLMKQITNFMSDIADEFKIVVVEAIRSLCLKFPLKYRSLMNFLSNILREEGGFE 399
NE +++ ++ + + ++I EF V AI +K + L ++++ + +
Sbjct: 345 NEKNIEEVLLEFKEYATEIDVEFVRKAVRAIGRCAIKIDRASERCIQVLLDLIQTKVNYV 404
Query: 400 YKKAIVDSIVILIRDIPDAKENGLLHLCEFIEDCEFTYLSTQILHFLGTEGPKTSDPSKY 459
++AI+ I + R P+ E + LC +E + ++ +G + + +
Sbjct: 405 VQEAII-VIKDIFRKYPNKYEGIIATLCANLESLDEPEAKASMIWIIGEYAERIDNAHEL 463
Query: 460 IRYIYNRVHLENATVRAAAVSTLAK 484
+ EN+ V+ ++++ K
Sbjct: 464 LNSFLEGFKDENSQVQLQLLTSIVK 488
>UNIPROTKB|P63009 [details] [associations]
symbol:AP2B1 "AP-2 complex subunit beta" species:9913 "Bos
taurus" [GO:0005215 "transporter activity" evidence=TAS]
[GO:0005905 "coated pit" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0030131 "clathrin adaptor complex"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] InterPro:IPR002553 InterPro:IPR008152
InterPro:IPR009028 InterPro:IPR013037 InterPro:IPR015151
InterPro:IPR016024 InterPro:IPR016342 InterPro:IPR026739
Pfam:PF01602 Pfam:PF02883 Pfam:PF09066 PIRSF:PIRSF002291
SMART:SM00809 SMART:SM01020 InterPro:IPR013041 GO:GO:0005886
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016192 GO:GO:0008565 GO:GO:0005905 GO:GO:0005215
UniGene:Bt.88309 HOGENOM:HOG000163270 HOVERGEN:HBG050515
GO:GO:0030131 Gene3D:2.60.40.1150 Gene3D:3.30.310.10
InterPro:IPR012295 PANTHER:PTHR11134 SUPFAM:SSF55711
SUPFAM:SSF49348 EMBL:M34177 IPI:IPI00845219 PIR:B35553
ProteinModelPortal:P63009 SMR:P63009 DIP:DIP-44826N STRING:P63009
Uniprot:P63009
Length = 937
Score = 131 (51.2 bits), Expect = 5.2e-07, Sum P(2) = 5.2e-07
Identities = 63/306 (20%), Positives = 133/306 (43%)
Query: 25 EKGAVLQEARVFNDPQLDPRRCSQVITKLLYLLNQGETFTKIEATEVFFAVTKLFQSRDI 84
+KG + + N+ + + R+ + + K++ + G+ + + +F V Q+ ++
Sbjct: 11 KKGEIFELKAELNNEKKEKRK--EAVKKVIAAMTVGK-----DVSSLFPDVVNCMQTDNL 63
Query: 85 GLRRMVYLMIKELSPSA-DEVIIVTSSLMKDMTSKTDMYRANAIRVLCRITDGTLLTQIE 143
L+++VYL + + S D I+ +S +KD + RA A+R + I + +
Sbjct: 64 ELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLC 123
Query: 144 RYLKQAIVDKNPVVASAALVSGIHLLQTTPEIVKR--WSNEVQEAVQSRAALVQFHALAL 201
L++ + D++P V A V L ++V+ + + +++ + +V +A+A
Sbjct: 124 EPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANAVAA 183
Query: 202 LHQIRQ---NDRLA------VSKLVTSLTRGTVRSPL--AQCLLIRYTTQVIREAATTQT 250
L +I + N L ++KL+T+L T + CL Y + REA +
Sbjct: 184 LSEISESHPNSNLLDLNPQNINKLLTALNECTEWGQIFILDCLS-NYNPKDDREAQSICE 242
Query: 251 GDRPFYDFLESCLRHKAEMVIFEAARAITELNGVTNRELTPAITVLQLFLSSSKPVLRFA 310
P S + A V+ + + + + N L L LS +P +++
Sbjct: 243 RVTPRLSHANSAVVLSAVKVLMKFLELLPKESDYYNMLLKKLAPPLVTLLSG-EPEVQYV 301
Query: 311 AVRTLN 316
A+R +N
Sbjct: 302 ALRNIN 307
Score = 73 (30.8 bits), Expect = 5.2e-07, Sum P(2) = 5.2e-07
Identities = 21/148 (14%), Positives = 67/148 (45%)
Query: 337 KTGNESSVDRLMKQITNFMSDIADEFKIVVVEAIRSLCLKFPLKYRSLMNFLSNILREEG 396
+ +++++ +++ ++ + +++ +F V AI +K ++ L ++++ +
Sbjct: 344 RLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKV 403
Query: 397 GFEYKKAIVDSIVILIRDIPDAKENGLLHLCEFIEDCEFTYLSTQILHFLGTEGPKTSDP 456
+ ++AIV I + R P+ E+ + LCE ++ + ++ +G + +
Sbjct: 404 NYVVQEAIV-VIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERIDNA 462
Query: 457 SKYIRYIYNRVHLENATVRAAAVSTLAK 484
+ + H E+ V+ ++ + K
Sbjct: 463 DELLESFLEGFHDESTQVQLTLLTAIVK 490
>UNIPROTKB|Q08DS7 [details] [associations]
symbol:AP2B1 "AP-1 complex subunit beta-1" species:9913
"Bos taurus" [GO:0030665 "clathrin-coated vesicle membrane"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0006897 "endocytosis" evidence=IEA] [GO:0030131 "clathrin
adaptor complex" evidence=IEA] [GO:0008565 "protein transporter
activity" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] InterPro:IPR002553 InterPro:IPR008152
InterPro:IPR009028 InterPro:IPR013037 InterPro:IPR015151
InterPro:IPR016024 InterPro:IPR016342 InterPro:IPR026739
Pfam:PF01602 Pfam:PF02883 Pfam:PF09066 PIRSF:PIRSF002291
SMART:SM00809 SMART:SM01020 InterPro:IPR013041 GO:GO:0005794
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0008565 GO:GO:0006897 EMBL:BC123583 IPI:IPI00696360
RefSeq:NP_001068593.1 UniGene:Bt.88309 ProteinModelPortal:Q08DS7
SMR:Q08DS7 STRING:Q08DS7 PRIDE:Q08DS7 GeneID:282183 KEGG:bta:282183
CTD:163 eggNOG:COG5096 HOGENOM:HOG000163270 HOVERGEN:HBG050515
InParanoid:Q08DS7 KO:K11825 OrthoDB:EOG4PG607 NextBio:20806011
GO:GO:0030131 GO:GO:0030665 Gene3D:2.60.40.1150 Gene3D:3.30.310.10
InterPro:IPR012295 PANTHER:PTHR11134 SUPFAM:SSF55711
SUPFAM:SSF49348 Uniprot:Q08DS7
Length = 951
Score = 131 (51.2 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 63/306 (20%), Positives = 133/306 (43%)
Query: 25 EKGAVLQEARVFNDPQLDPRRCSQVITKLLYLLNQGETFTKIEATEVFFAVTKLFQSRDI 84
+KG + + N+ + + R+ + + K++ + G+ + + +F V Q+ ++
Sbjct: 11 KKGEIFELKAELNNEKKEKRK--EAVKKVIAAMTVGK-----DVSSLFPDVVNCMQTDNL 63
Query: 85 GLRRMVYLMIKELSPSA-DEVIIVTSSLMKDMTSKTDMYRANAIRVLCRITDGTLLTQIE 143
L+++VYL + + S D I+ +S +KD + RA A+R + I + +
Sbjct: 64 ELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLC 123
Query: 144 RYLKQAIVDKNPVVASAALVSGIHLLQTTPEIVKR--WSNEVQEAVQSRAALVQFHALAL 201
L++ + D++P V A V L ++V+ + + +++ + +V +A+A
Sbjct: 124 EPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANAVAA 183
Query: 202 LHQIRQ---NDRLA------VSKLVTSLTRGTVRSPL--AQCLLIRYTTQVIREAATTQT 250
L +I + N L ++KL+T+L T + CL Y + REA +
Sbjct: 184 LSEISESHPNSNLLDLNPQNINKLLTALNECTEWGQIFILDCLS-NYNPKDDREAQSICE 242
Query: 251 GDRPFYDFLESCLRHKAEMVIFEAARAITELNGVTNRELTPAITVLQLFLSSSKPVLRFA 310
P S + A V+ + + + + N L L LS +P +++
Sbjct: 243 RVTPRLSHANSAVVLSAVKVLMKFLELLPKESDYYNMLLKKLAPPLVTLLSG-EPEVQYV 301
Query: 311 AVRTLN 316
A+R +N
Sbjct: 302 ALRNIN 307
Score = 73 (30.8 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 21/148 (14%), Positives = 67/148 (45%)
Query: 337 KTGNESSVDRLMKQITNFMSDIADEFKIVVVEAIRSLCLKFPLKYRSLMNFLSNILREEG 396
+ +++++ +++ ++ + +++ +F V AI +K ++ L ++++ +
Sbjct: 344 RLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKV 403
Query: 397 GFEYKKAIVDSIVILIRDIPDAKENGLLHLCEFIEDCEFTYLSTQILHFLGTEGPKTSDP 456
+ ++AIV I + R P+ E+ + LCE ++ + ++ +G + +
Sbjct: 404 NYVVQEAIV-VIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERIDNA 462
Query: 457 SKYIRYIYNRVHLENATVRAAAVSTLAK 484
+ + H E+ V+ ++ + K
Sbjct: 463 DELLESFLEGFHDESTQVQLTLLTAIVK 490
>UNIPROTKB|F1S182 [details] [associations]
symbol:LOC100517121 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0030131 "clathrin adaptor complex" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR013037 InterPro:IPR016024
InterPro:IPR016342 InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883
PIRSF:PIRSF002291 SMART:SM00809 InterPro:IPR013041 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
GO:GO:0008565 KO:K11825 GO:GO:0030131 Gene3D:2.60.40.1150
PANTHER:PTHR11134 SUPFAM:SSF49348 GeneTree:ENSGT00530000063138
OMA:YDISATM EMBL:CU927946 RefSeq:XP_003131766.3
Ensembl:ENSSSCT00000019278 GeneID:100517121 KEGG:ssc:100517121
Uniprot:F1S182
Length = 819
Score = 129 (50.5 bits), Expect = 6.1e-07, Sum P(2) = 6.1e-07
Identities = 63/306 (20%), Positives = 132/306 (43%)
Query: 25 EKGAVLQEARVFNDPQLDPRRCSQVITKLLYLLNQGETFTKIEATEVFFAVTKLFQSRDI 84
+KG + + N+ + + R+ + + K++ + G+ + + +F V Q+ ++
Sbjct: 11 KKGEIFELKAELNNEKKEKRK--EAVKKVIAAMTVGK-----DVSSLFPDVVNCMQTDNL 63
Query: 85 GLRRMVYLMIKELSPSA-DEVIIVTSSLMKDMTSKTDMYRANAIRVLCRITDGTLLTQIE 143
L+++VYL + + S D I+ +S +KD + RA A+R + I + +
Sbjct: 64 ELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLC 123
Query: 144 RYLKQAIVDKNPVVASAALVSGIHLLQTTPEIVKR--WSNEVQEAVQSRAALVQFHALAL 201
L++ + D++P V A V L ++V+ + + +++ + +V +A+A
Sbjct: 124 EPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANAVAA 183
Query: 202 LHQIRQ---NDRLA------VSKLVTSLTRGTVRSPL--AQCLLIRYTTQVIREAATTQT 250
L +I + N L ++KL+T+L T + CL Y + REA +
Sbjct: 184 LSEISESHPNSNLLDLNPQNINKLLTALNECTEWGQIFILDCLS-NYNPKDDREAQSICE 242
Query: 251 GDRPFYDFLESCLRHKAEMVIFEAARAITELNGVTNRELTPAITVLQLFLSSSKPVLRFA 310
P S + A V+ + + + N L L LS +P +++
Sbjct: 243 RVTPRLSHANSAVVLSAVKVLMKFLELLPNDSDYYNMLLKKLAPPLVTLLSG-EPEVQYV 301
Query: 311 AVRTLN 316
A+R +N
Sbjct: 302 ALRNIN 307
Score = 73 (30.8 bits), Expect = 6.1e-07, Sum P(2) = 6.1e-07
Identities = 21/148 (14%), Positives = 67/148 (45%)
Query: 337 KTGNESSVDRLMKQITNFMSDIADEFKIVVVEAIRSLCLKFPLKYRSLMNFLSNILREEG 396
+ +++++ +++ ++ + +++ +F V AI +K ++ L ++++ +
Sbjct: 344 RLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKV 403
Query: 397 GFEYKKAIVDSIVILIRDIPDAKENGLLHLCEFIEDCEFTYLSTQILHFLGTEGPKTSDP 456
+ ++AIV I + R P+ E+ + LCE ++ + ++ +G + +
Sbjct: 404 NYVVQEAIV-VIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERIDNA 462
Query: 457 SKYIRYIYNRVHLENATVRAAAVSTLAK 484
+ + H E+ V+ ++ + K
Sbjct: 463 DELLESFLEGFHDESTQVQLTLLTAIVK 490
>UNIPROTKB|P63010 [details] [associations]
symbol:AP2B1 "AP-2 complex subunit beta" species:9606 "Homo
sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0030131 "clathrin adaptor complex" evidence=IEA]
[GO:0005802 "trans-Golgi network" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0048268 "clathrin coat
assembly" evidence=IEA] [GO:0005905 "coated pit" evidence=IEA]
[GO:0030276 "clathrin binding" evidence=IPI] [GO:0005829 "cytosol"
evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007173 "epidermal growth factor receptor signaling pathway"
evidence=TAS] [GO:0007268 "synaptic transmission" evidence=TAS]
[GO:0007411 "axon guidance" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0019886 "antigen processing and
presentation of exogenous peptide antigen via MHC class II"
evidence=TAS] [GO:0030666 "endocytic vesicle membrane"
evidence=TAS] [GO:0030669 "clathrin-coated endocytic vesicle
membrane" evidence=TAS] [GO:0042059 "negative regulation of
epidermal growth factor receptor signaling pathway" evidence=TAS]
[GO:0048011 "neurotrophin TRK receptor signaling pathway"
evidence=TAS] [GO:0050690 "regulation of defense response to virus
by virus" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
Reactome:REACT_13685 InterPro:IPR002553 InterPro:IPR008152
InterPro:IPR009028 InterPro:IPR013037 InterPro:IPR015151
InterPro:IPR016024 InterPro:IPR016342 InterPro:IPR026739
Pfam:PF01602 Pfam:PF02883 Pfam:PF09066 PIRSF:PIRSF002291
SMART:SM00809 SMART:SM01020 InterPro:IPR013041 EMBL:M34175
GO:GO:0005829 GO:GO:0005886 Reactome:REACT_111045
Reactome:REACT_111102 Reactome:REACT_116125 Reactome:REACT_6900
GO:GO:0007411 GO:GO:0007173 GO:GO:0048011 GO:GO:0006886
GO:GO:0050690 GO:GO:0016032 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0030669 GO:GO:0019886 GO:GO:0008565
GO:GO:0007268 GO:GO:0005905 GO:GO:0005802 GO:GO:0048488
GO:GO:0007269 GO:GO:0048268 CTD:163 eggNOG:COG5096
HOGENOM:HOG000163270 HOVERGEN:HBG050515 KO:K11825 OrthoDB:EOG4PG607
GO:GO:0030131 Gene3D:2.60.40.1150 Gene3D:3.30.310.10
InterPro:IPR012295 PANTHER:PTHR11134 SUPFAM:SSF55711
SUPFAM:SSF49348 GO:GO:0042059 PDB:2JKR PDB:2JKT PDBsum:2JKR
PDBsum:2JKT PDB:2VGL PDB:2XA7 PDBsum:2VGL PDBsum:2XA7 EMBL:AC006237
EMBL:CH471147 EMBL:BC006201 IPI:IPI00784156 IPI:IPI00784366
PIR:A35553 RefSeq:NP_001025177.1 RefSeq:NP_001273.1
UniGene:Hs.514819 PDB:1E42 PDB:2G30 PDB:2IV8 PDB:2IV9 PDBsum:1E42
PDBsum:2G30 PDBsum:2IV8 PDBsum:2IV9 ProteinModelPortal:P63010
SMR:P63010 DIP:DIP-33098N IntAct:P63010 MINT:MINT-256705
STRING:P63010 PhosphoSite:P63010 DMDM:51702211 PaxDb:P63010
PRIDE:P63010 DNASU:163 Ensembl:ENST00000262325
Ensembl:ENST00000312678 Ensembl:ENST00000537622 GeneID:163
KEGG:hsa:163 UCSC:uc002hjq.3 UCSC:uc002hjr.3 GeneCards:GC17P033914
HGNC:HGNC:563 HPA:CAB017631 MIM:601025 neXtProt:NX_P63010
PharmGKB:PA24854 OMA:DCHLNAD ChiTaRS:AP2B1 EvolutionaryTrace:P63010
GenomeRNAi:163 NextBio:653 ArrayExpress:P63010 Bgee:P63010
CleanEx:HS_AP2B1 Genevestigator:P63010 GermOnline:ENSG00000006125
Uniprot:P63010
Length = 937
Score = 130 (50.8 bits), Expect = 6.6e-07, Sum P(2) = 6.6e-07
Identities = 63/306 (20%), Positives = 133/306 (43%)
Query: 25 EKGAVLQEARVFNDPQLDPRRCSQVITKLLYLLNQGETFTKIEATEVFFAVTKLFQSRDI 84
+KG + + N+ + + R+ + + K++ + G+ + + +F V Q+ ++
Sbjct: 11 KKGEIFELKAELNNEKKEKRK--EAVKKVIAAMTVGK-----DVSSLFPDVVNCMQTDNL 63
Query: 85 GLRRMVYLMIKELSPSA-DEVIIVTSSLMKDMTSKTDMYRANAIRVLCRITDGTLLTQIE 143
L+++VYL + + S D I+ +S +KD + RA A+R + I + +
Sbjct: 64 ELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLC 123
Query: 144 RYLKQAIVDKNPVVASAALVSGIHLLQTTPEIVKR--WSNEVQEAVQSRAALVQFHALAL 201
L++ + D++P V A V L ++V+ + + +++ + +V +A+A
Sbjct: 124 EPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANAVAA 183
Query: 202 LHQIRQ---NDRLA------VSKLVTSLTRGTVRSPL--AQCLLIRYTTQVIREAATTQT 250
L +I + N L ++KL+T+L T + CL Y + REA +
Sbjct: 184 LSEISESHPNSNLLDLNPQNINKLLTALNECTEWGQIFILDCLS-NYNPKDDREAQSICE 242
Query: 251 GDRPFYDFLESCLRHKAEMVIFEAARAITELNGVTNRELTPAITVLQLFLSSSKPVLRFA 310
P S + A V+ + + + + N L L LS +P +++
Sbjct: 243 RVTPRLSHANSAVVLSAVKVLMKFLELLPKDSDYYNMLLKKLAPPLVTLLSG-EPEVQYV 301
Query: 311 AVRTLN 316
A+R +N
Sbjct: 302 ALRNIN 307
Score = 73 (30.8 bits), Expect = 6.6e-07, Sum P(2) = 6.6e-07
Identities = 21/148 (14%), Positives = 67/148 (45%)
Query: 337 KTGNESSVDRLMKQITNFMSDIADEFKIVVVEAIRSLCLKFPLKYRSLMNFLSNILREEG 396
+ +++++ +++ ++ + +++ +F V AI +K ++ L ++++ +
Sbjct: 344 RLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKV 403
Query: 397 GFEYKKAIVDSIVILIRDIPDAKENGLLHLCEFIEDCEFTYLSTQILHFLGTEGPKTSDP 456
+ ++AIV I + R P+ E+ + LCE ++ + ++ +G + +
Sbjct: 404 NYVVQEAIV-VIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERIDNA 462
Query: 457 SKYIRYIYNRVHLENATVRAAAVSTLAK 484
+ + H E+ V+ ++ + K
Sbjct: 463 DELLESFLEGFHDESTQVQLTLLTAIVK 490
>MGI|MGI:1919020 [details] [associations]
symbol:Ap2b1 "adaptor-related protein complex 2, beta 1
subunit" species:10090 "Mus musculus" [GO:0005802 "trans-Golgi
network" evidence=ISO] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005905 "coated pit" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
[GO:0030118 "clathrin coat" evidence=ISO] [GO:0030131 "clathrin
adaptor complex" evidence=ISO] [GO:0030276 "clathrin binding"
evidence=ISO] [GO:0032403 "protein complex binding" evidence=ISO]
[GO:0048268 "clathrin coat assembly" evidence=ISO]
InterPro:IPR002553 InterPro:IPR008152 InterPro:IPR009028
InterPro:IPR013037 InterPro:IPR015151 InterPro:IPR016024
InterPro:IPR016342 InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883
Pfam:PF09066 PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020
InterPro:IPR013041 MGI:MGI:1919020 GO:GO:0005886 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0008565
GO:GO:0005905 GO:GO:0005802 GO:GO:0048488 GO:GO:0007269
GO:GO:0048268 CTD:163 eggNOG:COG5096 HOGENOM:HOG000163270
HOVERGEN:HBG050515 KO:K11825 OrthoDB:EOG4PG607 GO:GO:0030131
Gene3D:2.60.40.1150 Gene3D:3.30.310.10 InterPro:IPR012295
PANTHER:PTHR11134 SUPFAM:SSF55711 SUPFAM:SSF49348
GeneTree:ENSGT00530000063138 OMA:DCHLNAD ChiTaRS:AP2B1
EMBL:AK004975 EMBL:BC046772 IPI:IPI00119689 IPI:IPI00378063
RefSeq:NP_001030931.1 RefSeq:NP_082191.1 UniGene:Mm.39053
ProteinModelPortal:Q9DBG3 SMR:Q9DBG3 IntAct:Q9DBG3
MINT:MINT-1870047 STRING:Q9DBG3 PhosphoSite:Q9DBG3 PaxDb:Q9DBG3
PRIDE:Q9DBG3 Ensembl:ENSMUST00000018875 Ensembl:ENSMUST00000065692
GeneID:71770 KEGG:mmu:71770 UCSC:uc007kou.1 NextBio:334467
Bgee:Q9DBG3 CleanEx:MM_AP2B1 Genevestigator:Q9DBG3
GermOnline:ENSMUSG00000035152 Uniprot:Q9DBG3
Length = 937
Score = 130 (50.8 bits), Expect = 6.6e-07, Sum P(2) = 6.6e-07
Identities = 63/306 (20%), Positives = 133/306 (43%)
Query: 25 EKGAVLQEARVFNDPQLDPRRCSQVITKLLYLLNQGETFTKIEATEVFFAVTKLFQSRDI 84
+KG + + N+ + + R+ + + K++ + G+ + + +F V Q+ ++
Sbjct: 11 KKGEIFELKAELNNEKKEKRK--EAVKKVIAAMTVGK-----DVSSLFPDVVNCMQTDNL 63
Query: 85 GLRRMVYLMIKELSPSA-DEVIIVTSSLMKDMTSKTDMYRANAIRVLCRITDGTLLTQIE 143
L+++VYL + + S D I+ +S +KD + RA A+R + I + +
Sbjct: 64 ELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLC 123
Query: 144 RYLKQAIVDKNPVVASAALVSGIHLLQTTPEIVKR--WSNEVQEAVQSRAALVQFHALAL 201
L++ + D++P V A V L ++V+ + + +++ + +V +A+A
Sbjct: 124 EPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANAVAA 183
Query: 202 LHQIRQ---NDRLA------VSKLVTSLTRGTVRSPL--AQCLLIRYTTQVIREAATTQT 250
L +I + N L ++KL+T+L T + CL Y + REA +
Sbjct: 184 LSEISESHPNSNLLDLNPQNINKLLTALNECTEWGQIFILDCLS-NYNPKDDREAQSICE 242
Query: 251 GDRPFYDFLESCLRHKAEMVIFEAARAITELNGVTNRELTPAITVLQLFLSSSKPVLRFA 310
P S + A V+ + + + + N L L LS +P +++
Sbjct: 243 RVTPRLSHANSAVVLSAVKVLMKFLELLPKDSDYYNMLLKKLAPPLVTLLSG-EPEVQYV 301
Query: 311 AVRTLN 316
A+R +N
Sbjct: 302 ALRNIN 307
Score = 73 (30.8 bits), Expect = 6.6e-07, Sum P(2) = 6.6e-07
Identities = 21/148 (14%), Positives = 67/148 (45%)
Query: 337 KTGNESSVDRLMKQITNFMSDIADEFKIVVVEAIRSLCLKFPLKYRSLMNFLSNILREEG 396
+ +++++ +++ ++ + +++ +F V AI +K ++ L ++++ +
Sbjct: 344 RLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKV 403
Query: 397 GFEYKKAIVDSIVILIRDIPDAKENGLLHLCEFIEDCEFTYLSTQILHFLGTEGPKTSDP 456
+ ++AIV I + R P+ E+ + LCE ++ + ++ +G + +
Sbjct: 404 NYVVQEAIV-VIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERIDNA 462
Query: 457 SKYIRYIYNRVHLENATVRAAAVSTLAK 484
+ + H E+ V+ ++ + K
Sbjct: 463 DELLESFLEGFHDESTQVQLTLLTAIVK 490
>RGD|71048 [details] [associations]
symbol:Ap2b1 "adaptor-related protein complex 2, beta 1 subunit"
species:10116 "Rattus norvegicus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005802 "trans-Golgi network" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005905 "coated pit"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0030118 "clathrin coat" evidence=IDA] [GO:0030119
"AP-type membrane coat adaptor complex" evidence=TAS] [GO:0030131
"clathrin adaptor complex" evidence=IEA] [GO:0030276 "clathrin
binding" evidence=ISO;IDA] [GO:0032403 "protein complex binding"
evidence=IMP;IPI] [GO:0048268 "clathrin coat assembly" evidence=IDA]
InterPro:IPR002553 InterPro:IPR008152 InterPro:IPR009028
InterPro:IPR013037 InterPro:IPR015151 InterPro:IPR016024
InterPro:IPR016342 InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883
Pfam:PF09066 PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020
InterPro:IPR013041 RGD:71048 GO:GO:0005886 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0032403
GO:GO:0008565 GO:GO:0005905 GO:GO:0005802 GO:GO:0030276
GO:GO:0030118 GO:GO:0048268 CTD:163 eggNOG:COG5096
HOGENOM:HOG000163270 HOVERGEN:HBG050515 KO:K11825 GO:GO:0030131
Gene3D:2.60.40.1150 Gene3D:3.30.310.10 InterPro:IPR012295
PANTHER:PTHR11134 SUPFAM:SSF55711 SUPFAM:SSF49348
GeneTree:ENSGT00530000063138 GO:GO:0030119 OMA:DCHLNAD EMBL:M34176
EMBL:M77246 IPI:IPI00231502 IPI:IPI00389753 PIR:C35553
RefSeq:NP_542150.1 RefSeq:XP_003750923.1 UniGene:Rn.56138 PDB:3H1Z
PDB:3HS9 PDBsum:3H1Z PDBsum:3HS9 ProteinModelPortal:P62944
SMR:P62944 MINT:MINT-122517 STRING:P62944 PhosphoSite:P62944
PRIDE:P62944 Ensembl:ENSRNOT00000013363 Ensembl:ENSRNOT00000013629
GeneID:100912146 GeneID:140670 KEGG:rno:100912146 KEGG:rno:140670
EvolutionaryTrace:P62944 NextBio:620655 ArrayExpress:P62944
Genevestigator:P62944 GermOnline:ENSRNOG00000009988 Uniprot:P62944
Length = 937
Score = 130 (50.8 bits), Expect = 6.6e-07, Sum P(2) = 6.6e-07
Identities = 63/306 (20%), Positives = 133/306 (43%)
Query: 25 EKGAVLQEARVFNDPQLDPRRCSQVITKLLYLLNQGETFTKIEATEVFFAVTKLFQSRDI 84
+KG + + N+ + + R+ + + K++ + G+ + + +F V Q+ ++
Sbjct: 11 KKGEIFELKAELNNEKKEKRK--EAVKKVIAAMTVGK-----DVSSLFPDVVNCMQTDNL 63
Query: 85 GLRRMVYLMIKELSPSA-DEVIIVTSSLMKDMTSKTDMYRANAIRVLCRITDGTLLTQIE 143
L+++VYL + + S D I+ +S +KD + RA A+R + I + +
Sbjct: 64 ELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLC 123
Query: 144 RYLKQAIVDKNPVVASAALVSGIHLLQTTPEIVKR--WSNEVQEAVQSRAALVQFHALAL 201
L++ + D++P V A V L ++V+ + + +++ + +V +A+A
Sbjct: 124 EPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANAVAA 183
Query: 202 LHQIRQ---NDRLA------VSKLVTSLTRGTVRSPL--AQCLLIRYTTQVIREAATTQT 250
L +I + N L ++KL+T+L T + CL Y + REA +
Sbjct: 184 LSEISESHPNSNLLDLNPQNINKLLTALNECTEWGQIFILDCLS-NYNPKDDREAQSICE 242
Query: 251 GDRPFYDFLESCLRHKAEMVIFEAARAITELNGVTNRELTPAITVLQLFLSSSKPVLRFA 310
P S + A V+ + + + + N L L LS +P +++
Sbjct: 243 RVTPRLSHANSAVVLSAVKVLMKFLELLPKDSDYYNMLLKKLAPPLVTLLSG-EPEVQYV 301
Query: 311 AVRTLN 316
A+R +N
Sbjct: 302 ALRNIN 307
Score = 73 (30.8 bits), Expect = 6.6e-07, Sum P(2) = 6.6e-07
Identities = 21/148 (14%), Positives = 67/148 (45%)
Query: 337 KTGNESSVDRLMKQITNFMSDIADEFKIVVVEAIRSLCLKFPLKYRSLMNFLSNILREEG 396
+ +++++ +++ ++ + +++ +F V AI +K ++ L ++++ +
Sbjct: 344 RLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKV 403
Query: 397 GFEYKKAIVDSIVILIRDIPDAKENGLLHLCEFIEDCEFTYLSTQILHFLGTEGPKTSDP 456
+ ++AIV I + R P+ E+ + LCE ++ + ++ +G + +
Sbjct: 404 NYVVQEAIV-VIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERIDNA 462
Query: 457 SKYIRYIYNRVHLENATVRAAAVSTLAK 484
+ + H E+ V+ ++ + K
Sbjct: 463 DELLESFLEGFHDESTQVQLTLLTAIVK 490
>UNIPROTKB|E1BXC1 [details] [associations]
symbol:AP2B1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030131
"clathrin adaptor complex" evidence=IEA] InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR009028 InterPro:IPR013037
InterPro:IPR015151 InterPro:IPR016024 InterPro:IPR016342
InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883 Pfam:PF09066
PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020 InterPro:IPR013041
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016192 GO:GO:0008565 GO:GO:0030131 Gene3D:2.60.40.1150
Gene3D:3.30.310.10 InterPro:IPR012295 PANTHER:PTHR11134
SUPFAM:SSF55711 SUPFAM:SSF49348 GeneTree:ENSGT00530000063138
EMBL:AADN02025947 EMBL:AADN02025948 EMBL:AADN02025949
IPI:IPI00821954 Ensembl:ENSGALT00000040164 ArrayExpress:E1BXC1
Uniprot:E1BXC1
Length = 938
Score = 130 (50.8 bits), Expect = 6.6e-07, Sum P(2) = 6.6e-07
Identities = 63/306 (20%), Positives = 133/306 (43%)
Query: 25 EKGAVLQEARVFNDPQLDPRRCSQVITKLLYLLNQGETFTKIEATEVFFAVTKLFQSRDI 84
+KG + + N+ + + R+ + + K++ + G+ + + +F V Q+ ++
Sbjct: 11 KKGEIFELKAELNNEKKEKRK--EAVKKVIAAMTVGK-----DVSSLFPDVVNCMQTDNL 63
Query: 85 GLRRMVYLMIKELSPSA-DEVIIVTSSLMKDMTSKTDMYRANAIRVLCRITDGTLLTQIE 143
L+++VYL + + S D I+ +S +KD + RA A+R + I + +
Sbjct: 64 ELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLC 123
Query: 144 RYLKQAIVDKNPVVASAALVSGIHLLQTTPEIVKR--WSNEVQEAVQSRAALVQFHALAL 201
L++ + D++P V A V L ++V+ + + +++ + +V +A+A
Sbjct: 124 EPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANAVAA 183
Query: 202 LHQIRQ---NDRLA------VSKLVTSLTRGTVRSPL--AQCLLIRYTTQVIREAATTQT 250
L +I + N L ++KL+T+L T + CL Y + REA +
Sbjct: 184 LSEISESHPNSNLLDLNPQNINKLLTALNECTEWGQIFILDCLS-NYNPKDDREAQSICE 242
Query: 251 GDRPFYDFLESCLRHKAEMVIFEAARAITELNGVTNRELTPAITVLQLFLSSSKPVLRFA 310
P S + A V+ + + + + N L L LS +P +++
Sbjct: 243 RVTPRLSHANSAVVLSAVKVLMKFLELLPKDSDYYNMLLKKLAPPLVTLLSG-EPEVQYV 301
Query: 311 AVRTLN 316
A+R +N
Sbjct: 302 ALRNIN 307
Score = 73 (30.8 bits), Expect = 6.6e-07, Sum P(2) = 6.6e-07
Identities = 21/148 (14%), Positives = 67/148 (45%)
Query: 337 KTGNESSVDRLMKQITNFMSDIADEFKIVVVEAIRSLCLKFPLKYRSLMNFLSNILREEG 396
+ +++++ +++ ++ + +++ +F V AI +K ++ L ++++ +
Sbjct: 344 RLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKV 403
Query: 397 GFEYKKAIVDSIVILIRDIPDAKENGLLHLCEFIEDCEFTYLSTQILHFLGTEGPKTSDP 456
+ ++AIV I + R P+ E+ + LCE ++ + ++ +G + +
Sbjct: 404 NYVVQEAIV-VIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERIDNA 462
Query: 457 SKYIRYIYNRVHLENATVRAAAVSTLAK 484
+ + H E+ V+ ++ + K
Sbjct: 463 DELLESFLEGFHDESTQVQLTLLTAIVK 490
>FB|FBgn0010380 [details] [associations]
symbol:AP-1-2beta "Adaptor Protein complex 1/2, beta subunit"
species:7227 "Drosophila melanogaster" [GO:0005905 "coated pit"
evidence=IDA] [GO:0030119 "AP-type membrane coat adaptor complex"
evidence=IDA] [GO:0030121 "AP-1 adaptor complex" evidence=ISS;NAS]
[GO:0007269 "neurotransmitter secretion" evidence=NAS] [GO:0008021
"synaptic vesicle" evidence=TAS] [GO:0016183 "synaptic vesicle
coating" evidence=TAS] [GO:0006901 "vesicle coating" evidence=TAS]
[GO:0030135 "coated vesicle" evidence=TAS] [GO:0008565 "protein
transporter activity" evidence=IEA] [GO:0006886 "intracellular
protein transport" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0030136 "clathrin-coated vesicle"
evidence=IDA] [GO:0048749 "compound eye development" evidence=IMP]
InterPro:IPR002553 InterPro:IPR008152 InterPro:IPR009028
InterPro:IPR013037 InterPro:IPR015151 InterPro:IPR016024
InterPro:IPR016342 InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883
Pfam:PF09066 PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020
InterPro:IPR013041 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0008565 GO:GO:0008021 EMBL:AE014298
GO:GO:0005905 GO:GO:0007269 eggNOG:COG5096 GO:GO:0030131
Gene3D:2.60.40.1150 Gene3D:3.30.310.10 InterPro:IPR012295
PANTHER:PTHR11134 SUPFAM:SSF55711 SUPFAM:SSF49348 KO:K12392
GeneTree:ENSGT00530000063138 OMA:YDISATM GO:GO:0030119
GO:GO:0016183 GO:GO:0048749 EMBL:BT016054 EMBL:X75910 PIR:S39295
RefSeq:NP_523415.1 UniGene:Dm.2885 SMR:Q24253 DIP:DIP-20749N
IntAct:Q24253 MINT:MINT-316769 STRING:Q24253
EnsemblMetazoa:FBtr0074789 GeneID:32987 KEGG:dme:Dmel_CG12532
UCSC:CG12532-RA CTD:32987 FlyBase:FBgn0010380 InParanoid:Q24253
OrthoDB:EOG4GHX41 GenomeRNAi:32987 NextBio:781377 Uniprot:Q24253
Length = 921
Score = 122 (48.0 bits), Expect = 6.8e-07, Sum P(2) = 6.8e-07
Identities = 57/309 (18%), Positives = 136/309 (44%)
Query: 21 FLGIEKGAVLQEARVFNDPQLDPRRCSQVITKLLYLLNQGETFTKIEATEVFFAVTKLFQ 80
F +KG + + N+ + + ++ + + K++ + G+ + + +F V Q
Sbjct: 7 FTTTKKGEIFELKSELNNDKKEKKK--EAVKKVIASMTVGK-----DVSALFPDVVNCMQ 59
Query: 81 SRDIGLRRMVYLMIKELSPSA-DEVIIVTSSLMKDMTSKTDMYRANAIRVLCRITDGTLL 139
+ ++ L+++VYL + + S D I+ ++ +KD + RA A+R + I +
Sbjct: 60 TDNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCEDSNPLIRALAVRTMGCIRVDKIT 119
Query: 140 TQIERYLKQAIVDKNPVVASAALVSGIHLLQTTPEIVKR--WSNEVQEAVQSRAALVQFH 197
+ L++ + D++P V A V L + +V+ + +++++ + +V +
Sbjct: 120 EYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDISATMVEDQGFLDQLKDLLSDSNPMVVAN 179
Query: 198 ALALLHQIRQNDRLAVSKL-VTSLTRGTVRSPLAQCLLIRYTTQVIREAATTQTGDRPFY 256
A+A L +I + + + + S+T + + L +C + A + +R
Sbjct: 180 AVAALSEINEASQSGQPLVEMNSVTINKLLTALNECTEWGQVFILDSLANYSPKDEREAQ 239
Query: 257 DFLESC---LRHKAEMVIFEAARAITELNGVTNRE------LTPAITVLQLFLSSSKPVL 307
E L H V+ A + + +L + + + LT + + L SS+P +
Sbjct: 240 SICERITPRLAHANAAVVLSAVKVLMKLLEMLSSDSDFCATLTKKLAPPLVTLLSSEPEV 299
Query: 308 RFAAVRTLN 316
++ A+R +N
Sbjct: 300 QYVALRNIN 308
Score = 81 (33.6 bits), Expect = 6.8e-07, Sum P(2) = 6.8e-07
Identities = 35/203 (17%), Positives = 88/203 (43%)
Query: 337 KTGNESSVDRLMKQITNFMSDIADEFKIVVVEAIRSLCLKFPLKYRSLMNFLSNILREEG 396
+ N+S++ +++ ++ + +++ +F V AI +K ++ L ++++ +
Sbjct: 345 RLANQSNIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEPSAERCVSTLLDLIQTKV 404
Query: 397 GFEYKKAIVDSIVILIRDIPDAKENGLLHLCEFIEDCEFTYLSTQILHFLGTEGPKTSDP 456
+ ++AIV I + R P+ E+ + LCE ++ + ++ +G + +
Sbjct: 405 NYVVQEAIV-VIKDIFRKYPNKYESIISTLCENLDTLDEPEARASMVWIIGEYAERIDNA 463
Query: 457 SKYIRYIYNRVHLENATVRAAAVSTLAK-FGAMVDALKPRVFVLLRRCLYDGDDEEPAEQ 515
+ + ENA V+ ++ + K F + V +L D D+ + ++
Sbjct: 464 DELLDSFLEGFQDENAQVQLQLLTAVVKLFLKRPSDTQELVQHVLSLATQDSDNPDLRDR 523
Query: 516 PFD----INSVPKEVKTQPLAEK 534
F +++ P K LA+K
Sbjct: 524 GFIYWRLLSTDPAAAKEVVLADK 546
>UNIPROTKB|E2RIV1 [details] [associations]
symbol:AP2B1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030131 "clathrin adaptor complex"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] InterPro:IPR002553 InterPro:IPR008152
InterPro:IPR009028 InterPro:IPR013037 InterPro:IPR015151
InterPro:IPR016024 InterPro:IPR016342 InterPro:IPR026739
Pfam:PF01602 Pfam:PF02883 Pfam:PF09066 PIRSF:PIRSF002291
SMART:SM00809 SMART:SM01020 InterPro:IPR013041 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
GO:GO:0008565 CTD:163 KO:K11825 GO:GO:0030131 Gene3D:2.60.40.1150
Gene3D:3.30.310.10 InterPro:IPR012295 PANTHER:PTHR11134
SUPFAM:SSF55711 SUPFAM:SSF49348 GeneTree:ENSGT00530000063138
OMA:DCHLNAD EMBL:AAEX03006623 RefSeq:XP_853723.1
ProteinModelPortal:E2RIV1 Ensembl:ENSCAFT00000028998 GeneID:480605
KEGG:cfa:480605 Uniprot:E2RIV1
Length = 951
Score = 130 (50.8 bits), Expect = 6.8e-07, Sum P(2) = 6.8e-07
Identities = 63/306 (20%), Positives = 133/306 (43%)
Query: 25 EKGAVLQEARVFNDPQLDPRRCSQVITKLLYLLNQGETFTKIEATEVFFAVTKLFQSRDI 84
+KG + + N+ + + R+ + + K++ + G+ + + +F V Q+ ++
Sbjct: 11 KKGEIFELKAELNNEKKEKRK--EAVKKVIAAMTVGK-----DVSSLFPDVVNCMQTDNL 63
Query: 85 GLRRMVYLMIKELSPSA-DEVIIVTSSLMKDMTSKTDMYRANAIRVLCRITDGTLLTQIE 143
L+++VYL + + S D I+ +S +KD + RA A+R + I + +
Sbjct: 64 ELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLC 123
Query: 144 RYLKQAIVDKNPVVASAALVSGIHLLQTTPEIVKR--WSNEVQEAVQSRAALVQFHALAL 201
L++ + D++P V A V L ++V+ + + +++ + +V +A+A
Sbjct: 124 EPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANAVAA 183
Query: 202 LHQIRQ---NDRLA------VSKLVTSLTRGTVRSPL--AQCLLIRYTTQVIREAATTQT 250
L +I + N L ++KL+T+L T + CL Y + REA +
Sbjct: 184 LSEISESHPNSNLLDLNPQNINKLLTALNECTEWGQIFILDCLS-NYNPKDDREAQSICE 242
Query: 251 GDRPFYDFLESCLRHKAEMVIFEAARAITELNGVTNRELTPAITVLQLFLSSSKPVLRFA 310
P S + A V+ + + + + N L L LS +P +++
Sbjct: 243 RVTPRLSHANSAVVLSAVKVLMKFLELLPKDSDYYNMLLKKLAPPLVTLLSG-EPEVQYV 301
Query: 311 AVRTLN 316
A+R +N
Sbjct: 302 ALRNIN 307
Score = 73 (30.8 bits), Expect = 6.8e-07, Sum P(2) = 6.8e-07
Identities = 21/148 (14%), Positives = 67/148 (45%)
Query: 337 KTGNESSVDRLMKQITNFMSDIADEFKIVVVEAIRSLCLKFPLKYRSLMNFLSNILREEG 396
+ +++++ +++ ++ + +++ +F V AI +K ++ L ++++ +
Sbjct: 344 RLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKV 403
Query: 397 GFEYKKAIVDSIVILIRDIPDAKENGLLHLCEFIEDCEFTYLSTQILHFLGTEGPKTSDP 456
+ ++AIV I + R P+ E+ + LCE ++ + ++ +G + +
Sbjct: 404 NYVVQEAIV-VIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERIDNA 462
Query: 457 SKYIRYIYNRVHLENATVRAAAVSTLAK 484
+ + H E+ V+ ++ + K
Sbjct: 463 DELLESFLEGFHDESTQVQLTLLTAIVK 490
>UNIPROTKB|E1BY12 [details] [associations]
symbol:AP2B1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030131
"clathrin adaptor complex" evidence=IEA] InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR009028 InterPro:IPR013037
InterPro:IPR015151 InterPro:IPR016024 InterPro:IPR016342
InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883 Pfam:PF09066
PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020 InterPro:IPR013041
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016192 GO:GO:0008565 GO:GO:0030131 Gene3D:2.60.40.1150
Gene3D:3.30.310.10 InterPro:IPR012295 PANTHER:PTHR11134
SUPFAM:SSF55711 SUPFAM:SSF49348 GeneTree:ENSGT00530000063138
OMA:DCHLNAD EMBL:AADN02025947 EMBL:AADN02025948 EMBL:AADN02025949
IPI:IPI00591263 Ensembl:ENSGALT00000003347 ArrayExpress:E1BY12
Uniprot:E1BY12
Length = 952
Score = 130 (50.8 bits), Expect = 6.9e-07, Sum P(2) = 6.9e-07
Identities = 63/306 (20%), Positives = 133/306 (43%)
Query: 25 EKGAVLQEARVFNDPQLDPRRCSQVITKLLYLLNQGETFTKIEATEVFFAVTKLFQSRDI 84
+KG + + N+ + + R+ + + K++ + G+ + + +F V Q+ ++
Sbjct: 11 KKGEIFELKAELNNEKKEKRK--EAVKKVIAAMTVGK-----DVSSLFPDVVNCMQTDNL 63
Query: 85 GLRRMVYLMIKELSPSA-DEVIIVTSSLMKDMTSKTDMYRANAIRVLCRITDGTLLTQIE 143
L+++VYL + + S D I+ +S +KD + RA A+R + I + +
Sbjct: 64 ELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLC 123
Query: 144 RYLKQAIVDKNPVVASAALVSGIHLLQTTPEIVKR--WSNEVQEAVQSRAALVQFHALAL 201
L++ + D++P V A V L ++V+ + + +++ + +V +A+A
Sbjct: 124 EPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANAVAA 183
Query: 202 LHQIRQ---NDRLA------VSKLVTSLTRGTVRSPL--AQCLLIRYTTQVIREAATTQT 250
L +I + N L ++KL+T+L T + CL Y + REA +
Sbjct: 184 LSEISESHPNSNLLDLNPQNINKLLTALNECTEWGQIFILDCLS-NYNPKDDREAQSICE 242
Query: 251 GDRPFYDFLESCLRHKAEMVIFEAARAITELNGVTNRELTPAITVLQLFLSSSKPVLRFA 310
P S + A V+ + + + + N L L LS +P +++
Sbjct: 243 RVTPRLSHANSAVVLSAVKVLMKFLELLPKDSDYYNMLLKKLAPPLVTLLSG-EPEVQYV 301
Query: 311 AVRTLN 316
A+R +N
Sbjct: 302 ALRNIN 307
Score = 73 (30.8 bits), Expect = 6.9e-07, Sum P(2) = 6.9e-07
Identities = 21/148 (14%), Positives = 67/148 (45%)
Query: 337 KTGNESSVDRLMKQITNFMSDIADEFKIVVVEAIRSLCLKFPLKYRSLMNFLSNILREEG 396
+ +++++ +++ ++ + +++ +F V AI +K ++ L ++++ +
Sbjct: 344 RLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKV 403
Query: 397 GFEYKKAIVDSIVILIRDIPDAKENGLLHLCEFIEDCEFTYLSTQILHFLGTEGPKTSDP 456
+ ++AIV I + R P+ E+ + LCE ++ + ++ +G + +
Sbjct: 404 NYVVQEAIV-VIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERIDNA 462
Query: 457 SKYIRYIYNRVHLENATVRAAAVSTLAK 484
+ + H E+ V+ ++ + K
Sbjct: 463 DELLESFLEGFHDESTQVQLTLLTAIVK 490
>WB|WBGene00000160 [details] [associations]
symbol:apb-1 species:6239 "Caenorhabditis elegans"
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0030131 "clathrin adaptor
complex" evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
InterPro:IPR002553 InterPro:IPR008152 InterPro:IPR009028
InterPro:IPR013037 InterPro:IPR015151 InterPro:IPR016024
InterPro:IPR016342 InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883
Pfam:PF09066 PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020
InterPro:IPR013041 GO:GO:0009792 GO:GO:0006898 GO:GO:0040007
GO:GO:0006915 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0002119 GO:GO:0008565 GO:GO:0000003
HOGENOM:HOG000163270 KO:K11825 GO:GO:0030131 Gene3D:2.60.40.1150
Gene3D:3.30.310.10 InterPro:IPR012295 PANTHER:PTHR11134
SUPFAM:SSF55711 SUPFAM:SSF49348 OMA:PGNPSCT
GeneTree:ENSGT00530000063138 EMBL:FO081557 UniGene:Cel.22457
GeneID:175376 KEGG:cel:CELE_Y71H2B.10 UCSC:Y71H2B.10a CTD:175376
NextBio:887890 RefSeq:NP_001022937.1 ProteinModelPortal:Q9N4F3
SMR:Q9N4F3 DIP:DIP-27411N IntAct:Q9N4F3 MINT:MINT-116366
STRING:Q9N4F3 PRIDE:Q9N4F3 EnsemblMetazoa:Y71H2B.10a.1
EnsemblMetazoa:Y71H2B.10a.2 WormBase:Y71H2B.10a InParanoid:Q9N4F3
ArrayExpress:Q9N4F3 Uniprot:Q9N4F3
Length = 955
Score = 120 (47.3 bits), Expect = 7.5e-07, Sum P(2) = 7.5e-07
Identities = 62/312 (19%), Positives = 134/312 (42%)
Query: 21 FLGIEKGAVLQEARVFNDPQLDPRRCSQVITKLLYLLNQGETFTKIEATEVFFAVTKLFQ 80
F +KG + + N + + ++ + + K++ + G+ + + +F V Q
Sbjct: 7 FTTTKKGEIFELKNELNSDKKEKKK--EAVKKVIASMTVGK-----DVSALFPDVVNCMQ 59
Query: 81 SRDIGLRRMVYLMIKELSPSA-DEVIIVTSSLMKDMTSKTDMYRANAIRVLCRITDGTLL 139
+ ++ L+++VYL + + S D I+ ++ +KD + RA A+R + I +
Sbjct: 60 TDNVELKKLVYLYLMNYAKSQPDLAIMAVNTFVKDCEDPNPLIRALAVRTMGCIRVEKIT 119
Query: 140 TQIERYLKQAIVDKNPVVASAALVSGIHLLQTTPEIVKR--WSNEVQEAVQSRAALVQFH 197
+ L++ + D++P V A V L P +VK + + + + +V +
Sbjct: 120 EYLCDPLRRCMKDEDPYVRKTAAVCVAKLHDMNPALVKEQGFVELLNDLLSDANPMVVAN 179
Query: 198 ALALLHQIRQNDRLA------VSKLVTSLTRGTVRSPLAQC-LLIRYTTQVIREAATTQT 250
A+A L ++ + + V+KL+T+L T + L YT + RE T
Sbjct: 180 AVAALTEMNEQQTVIEVNSQMVNKLLTALNECTEWGQVFILDALAGYTPRDERE--TQNI 237
Query: 251 GDRPFYDFLESCLRHKAEMVIFEAARAITELNGVTNRE------LTPAITVLQLFLSSSK 304
+R + L H V+ + + +L + + LT + + L S++
Sbjct: 238 CER-----ISPRLAHANAAVVLSTVKVLMKLIDMMPADSDFITQLTKKLAPPMVTLLSAE 292
Query: 305 PVLRFAAVRTLN 316
P +++ A+R +N
Sbjct: 293 PEIQYVALRNIN 304
Score = 83 (34.3 bits), Expect = 7.5e-07, Sum P(2) = 7.5e-07
Identities = 36/206 (17%), Positives = 85/206 (41%)
Query: 337 KTGNESSVDRLMKQITNFMSDIADEFKIVVVEAIRSLCLKFPLKYRSLMNFLSNILREEG 396
+ ++++ +++ ++ + +++ +F V AI +K + L +++ +
Sbjct: 341 RLAQQNNIAQVLSELKEYATEVDVDFVRKSVRAIGRCAIKVEASSERCVQTLLELIQTKV 400
Query: 397 GFEYKKAIVDSIVILIRDIPDAKENGLLHLCEFIEDCEFTYLSTQILHFLGTEGPKTSDP 456
+ ++A+V I + R P+ E+ + LCE ++ + ++ +G + +
Sbjct: 401 NYVVQEAVV-VIKDIFRKYPNRYESIISALCENLDTLDEPEARASMIWIIGEYAERIDNA 459
Query: 457 SKYIRYIYNRVHLENATVR----AAAVSTLAKFGAMVDALKPRVFVLLRRCLYDGDDEEP 512
+ + H EN V+ A V K + AL RV L + D D+ +
Sbjct: 460 DELLESFVEGFHDENTQVQLQLLTAVVKLFLKRPGVAQALVQRVLSLATQ---DSDNPDL 516
Query: 513 AEQPFD----INSVPKEVKTQPLAEK 534
++ F +++ P K L EK
Sbjct: 517 RDRGFIYWRLLSADPAAAKNVVLTEK 542
>ZFIN|ZDB-GENE-030131-6564 [details] [associations]
symbol:ap2b1 "adaptor-related protein complex 2,
beta 1 subunit" species:7955 "Danio rerio" [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0030117 "membrane
coat" evidence=IEA] [GO:0030131 "clathrin adaptor complex"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR009028 InterPro:IPR013037
InterPro:IPR015151 InterPro:IPR016024 InterPro:IPR016342
InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883 Pfam:PF09066
PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020 InterPro:IPR013041
ZFIN:ZDB-GENE-030131-6564 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192 GO:GO:0008565
HOVERGEN:HBG050515 GO:GO:0030131 Gene3D:2.60.40.1150
Gene3D:3.30.310.10 InterPro:IPR012295 PANTHER:PTHR11134
SUPFAM:SSF55711 SUPFAM:SSF49348 EMBL:BC049138 IPI:IPI00511115
UniGene:Dr.150746 ProteinModelPortal:Q7ZUF4 SMR:Q7ZUF4
ArrayExpress:Q7ZUF4 Uniprot:Q7ZUF4
Length = 951
Score = 131 (51.2 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 63/309 (20%), Positives = 137/309 (44%)
Query: 25 EKGAVLQEARVFNDPQLDPRRCSQVITKLLYLLNQGETFTKIEATEVFFAVTKLFQSRDI 84
+KG + + N+ + + R+ + + K++ + G+ + + +F V Q+ ++
Sbjct: 11 KKGEIFELKAELNNEKKEKRK--EAVKKVIAAMTVGK-----DVSSLFPDVVNCMQTDNL 63
Query: 85 GLRRMVYLMIKELSPSA-DEVIIVTSSLMKDMTSKTDMYRANAIRVLCRITDGTLLTQIE 143
L+++VYL + + S D I+ +S +KD + RA A+R + I + +
Sbjct: 64 ELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLC 123
Query: 144 RYLKQAIVDKNPVVASAALVSGIHLLQTTPEIVKR--WSNEVQEAVQSRAALVQFHALAL 201
L++ + D++P V A V L ++V+ + + +++ + +V +A+A
Sbjct: 124 EPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANAVAA 183
Query: 202 LHQIRQ---NDRLA------VSKLVTSLTRGTVRSPL--AQCLLIRYTTQVIREAATTQT 250
L +I + N L ++KL+T+L T + CL Y + REA +
Sbjct: 184 LSEISESHPNSNLLDLNPQNINKLLTALNECTEWGQIFILDCLS-NYNPKDEREAQSICE 242
Query: 251 GDRPFYDFLESCLRHKAEMVIFEAARAITELNGVTN---RELTPAITVLQLFLSSSKPVL 307
P S + A V+ + + + + N ++L+P + L S +P +
Sbjct: 243 RVTPRLSHANSAVVLSAVKVLMKFLELLPKDSDYYNTLLKKLSPPLVTLL----SGEPEV 298
Query: 308 RFAAVRTLN 316
++ A+R +N
Sbjct: 299 QYVALRNIN 307
Score = 69 (29.3 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 21/148 (14%), Positives = 66/148 (44%)
Query: 337 KTGNESSVDRLMKQITNFMSDIADEFKIVVVEAIRSLCLKFPLKYRSLMNFLSNILREEG 396
+ + +++ +++ ++ + +++ +F V AI +K ++ L ++++ +
Sbjct: 344 RLASHANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKV 403
Query: 397 GFEYKKAIVDSIVILIRDIPDAKENGLLHLCEFIEDCEFTYLSTQILHFLGTEGPKTSDP 456
+ ++AIV I + R P+ E+ + LCE ++ + ++ +G + +
Sbjct: 404 NYVVQEAIV-VIRDIFRKYPNKYESIIATLCENLDSLDEPDARGAMIWIVGEYAERIDNA 462
Query: 457 SKYIRYIYNRVHLENATVRAAAVSTLAK 484
+ + H E+ V+ ++ + K
Sbjct: 463 DELLESFLEGFHDESTQVQLTLLTAIVK 490
>UNIPROTKB|I3L6Y6 [details] [associations]
symbol:AP2B1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030131 "clathrin adaptor complex" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR009028 InterPro:IPR013037
InterPro:IPR015151 InterPro:IPR016024 InterPro:IPR016342
InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883 Pfam:PF09066
PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020 InterPro:IPR013041
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016192 GO:GO:0008565 GO:GO:0030131 Gene3D:2.60.40.1150
Gene3D:3.30.310.10 InterPro:IPR012295 PANTHER:PTHR11134
SUPFAM:SSF55711 SUPFAM:SSF49348 GeneTree:ENSGT00530000063138
OMA:DCHLNAD Ensembl:ENSSSCT00000025334 Uniprot:I3L6Y6
Length = 939
Score = 123 (48.4 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 62/304 (20%), Positives = 130/304 (42%)
Query: 27 GAVLQEARVFNDPQLDPRRCSQVITKLLYLLNQGETFTKIEATEVFFAVTKLFQSRDIGL 86
G + + N+ + + R+ + + K++ + G+ + + +F V Q+ ++ L
Sbjct: 1 GEIFELKAELNNEKKEKRK--EAVKKVIAAMTVGK-----DVSSLFPDVVNCMQTDNLEL 53
Query: 87 RRMVYLMIKELSPSA-DEVIIVTSSLMKDMTSKTDMYRANAIRVLCRITDGTLLTQIERY 145
+++VYL + + S D I+ +S +KD + RA A+R + I + +
Sbjct: 54 KKLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLCEP 113
Query: 146 LKQAIVDKNPVVASAALVSGIHLLQTTPEIVKR--WSNEVQEAVQSRAALVQFHALALLH 203
L++ + D++P V A V L ++V+ + + +++ + +V +A+A L
Sbjct: 114 LRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANAVAALS 173
Query: 204 QIRQ---NDRLA------VSKLVTSLTRGTVRSPL--AQCLLIRYTTQVIREAATTQTGD 252
+I + N L ++KL+T+L T + CL Y + REA +
Sbjct: 174 EISESHPNSNLLDLNPQNINKLLTALNECTEWGQIFILDCLS-NYNPKDDREAQSICERV 232
Query: 253 RPFYDFLESCLRHKAEMVIFEAARAITELNGVTNRELTPAITVLQLFLSSSKPVLRFAAV 312
P S + A V+ + + + N L L LS +P +++ A+
Sbjct: 233 TPRLSHANSAVVLSAVKVLMKFLELLPNDSDYYNMLLKKLAPPLVTLLSG-EPEVQYVAL 291
Query: 313 RTLN 316
R +N
Sbjct: 292 RNIN 295
Score = 73 (30.8 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 21/148 (14%), Positives = 67/148 (45%)
Query: 337 KTGNESSVDRLMKQITNFMSDIADEFKIVVVEAIRSLCLKFPLKYRSLMNFLSNILREEG 396
+ +++++ +++ ++ + +++ +F V AI +K ++ L ++++ +
Sbjct: 332 RLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKV 391
Query: 397 GFEYKKAIVDSIVILIRDIPDAKENGLLHLCEFIEDCEFTYLSTQILHFLGTEGPKTSDP 456
+ ++AIV I + R P+ E+ + LCE ++ + ++ +G + +
Sbjct: 392 NYVVQEAIV-VIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERIDNA 450
Query: 457 SKYIRYIYNRVHLENATVRAAAVSTLAK 484
+ + H E+ V+ ++ + K
Sbjct: 451 DELLESFLEGFHDESTQVQLTLLTAIVK 478
>MGI|MGI:1337130 [details] [associations]
symbol:Ap4b1 "adaptor-related protein complex AP-4, beta 1"
species:10090 "Mus musculus" [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005802 "trans-Golgi network" evidence=IDA;TAS]
[GO:0006810 "transport" evidence=IEA] [GO:0006886 "intracellular
protein transport" evidence=TAS] [GO:0008565 "protein transporter
activity" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=TAS] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030131
"clathrin adaptor complex" evidence=IEA] InterPro:IPR002553
InterPro:IPR015151 InterPro:IPR016024 InterPro:IPR016342
InterPro:IPR026739 Pfam:PF01602 Pfam:PF09066 PIRSF:PIRSF002291
SMART:SM01020 MGI:MGI:1337130 GO:GO:0005794 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
GO:GO:0008565 GO:GO:0005802 eggNOG:COG5096 GO:GO:0030131
Gene3D:3.30.310.10 InterPro:IPR012295 PANTHER:PTHR11134
GeneTree:ENSGT00530000063138 CTD:10717 HOGENOM:HOG000294128
HOVERGEN:HBG050521 KO:K12401 OrthoDB:EOG48KR9Z EMBL:AF155157
EMBL:AC124698 EMBL:CU210953 IPI:IPI00125391 RefSeq:NP_001157024.1
RefSeq:NP_080469.2 UniGene:Mm.197568 ProteinModelPortal:Q9WV76
STRING:Q9WV76 PhosphoSite:Q9WV76 PaxDb:Q9WV76 PRIDE:Q9WV76
Ensembl:ENSMUST00000047285 Ensembl:ENSMUST00000076599 GeneID:67489
KEGG:mmu:67489 InParanoid:Q9WV76 OMA:EQFEKTW ChiTaRS:AP4B1
NextBio:324726 CleanEx:MM_AP4B1 Genevestigator:Q9WV76
GermOnline:ENSMUSG00000032952 Uniprot:Q9WV76
Length = 738
Score = 133 (51.9 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 49/206 (23%), Positives = 98/206 (47%)
Query: 20 PFLGIEKGAVLQEARVFNDP--QLDPRRCSQVITKLLYLLNQGETFTKIEATEVFFAVTK 77
P+LG E V + + +P Q D R VI +++ + QG ++ ++VF + K
Sbjct: 2 PYLGSED-VVKELKKALCNPHIQADRLRYRNVIQRVIRHMTQG-----LDMSDVFMEMVK 55
Query: 78 LFQSRDIGLRRMVYLMIKELSP-SADEVIIVTSSLMKDMTSKTDMYRANAIRVLCRITDG 136
+ DI +++VYL + +P D ++ ++L KD + M R A+R +C +
Sbjct: 56 ASATVDIVQKKLVYLYMGTYAPLKPDLALLAINTLCKDCSDPNPMVRGLALRSMCSLR-- 113
Query: 137 TLLTQIERYLKQAIV----DKNPVVASAALV--SGIHLLQTTPEIVKRWSNEVQEAVQSR 190
+ ++ Y++Q +V DK V A++ + +H L E+ NE+ ++ +
Sbjct: 114 --MPGVQEYIQQPVVNGLRDKASYVRRVAVLGCAKMHNLHGDSEVDGALVNELYSLLRDQ 171
Query: 191 AALVQFHALALLHQI-RQNDRLAVSK 215
+V + L L +I +Q + ++K
Sbjct: 172 DPIVVVNCLRSLEEILKQEGGVVINK 197
Score = 60 (26.2 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 34/176 (19%), Positives = 72/176 (40%)
Query: 340 NESSVDRLMKQITNFMSDIADEFKIVVVEAIRSLCLKFPLKYRSLMNFLSNILREEGGFE 399
N+ +V ++++++ + +D+A +F + AI S+ + + ++ L LR+E
Sbjct: 341 NDENVQQVLEELRGYCTDVAADFAQAAIFAIGSIAKTYTDQCVQILTELLG-LRQE---H 396
Query: 400 YKKAIVDSIVILIRDIPDAKENGLLHLCEFIEDCEFTYLSTQ----ILHFLGTEGPKTSD 455
+V + L+ P E +C+ + CE ++ ++ LG G K +
Sbjct: 397 ITTVVVQTFRDLVWLCPQCTEA----VCQALPGCEENIQDSEGKQALIWLLGVHGEKIPN 452
Query: 456 PSKYIRYIYNRVHLENATVRAAAVSTLAKFGAMVDALKPRVFVLLRRCLYDGDDEE 511
+ + V E T A + L +V + +L R L+ +EE
Sbjct: 453 APYVLEDFVDNVKSE--TFPAVKMELLTALMRLVLSRPAECQDMLGRLLHYCIEEE 506
>TAIR|locus:2117924 [details] [associations]
symbol:AT4G23460 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0006886 "intracellular
protein transport" evidence=IEA] [GO:0008565 "protein transporter
activity" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030131
"clathrin adaptor complex" evidence=IEA] [GO:0030276 "clathrin
binding" evidence=ISS] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR009028 InterPro:IPR013037
InterPro:IPR015151 InterPro:IPR016024 InterPro:IPR016342
InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883 Pfam:PF09066
PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020 InterPro:IPR013041
GO:GO:0005886 GO:GO:0009506 GO:GO:0005794 GO:GO:0006886
EMBL:CP002687 GenomeReviews:CT486007_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0008565 GO:GO:0006897
eggNOG:COG5096 HOGENOM:HOG000163270 GO:GO:0030131 GO:GO:0030665
Gene3D:2.60.40.1150 Gene3D:3.30.310.10 InterPro:IPR012295
PANTHER:PTHR11134 SUPFAM:SSF55711 SUPFAM:SSF49348 KO:K12392
OMA:SDPNPLI EMBL:AL031326 EMBL:AL161559 EMBL:AY065000 EMBL:AF216387
IPI:IPI00521980 PIR:T05384 RefSeq:NP_194077.1 UniGene:At.2441
ProteinModelPortal:O81742 SMR:O81742 STRING:O81742 PaxDb:O81742
PRIDE:O81742 EnsemblPlants:AT4G23460.1 GeneID:828445
KEGG:ath:AT4G23460 TAIR:At4g23460 InParanoid:Q8VZF2
PhylomeDB:O81742 ProtClustDB:CLSN2685309 Genevestigator:O81742
Uniprot:O81742
Length = 893
Score = 143 (55.4 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 63/310 (20%), Positives = 130/310 (41%)
Query: 21 FLGIEKGAVLQEARVFNDPQLDPRRCSQVITKLLYLLNQGETFTKIEATEVFFAVTKLFQ 80
F +KG + + N D R+ + K++ + G+ + + +F V Q
Sbjct: 9 FSTTKKGEIPELKEELNSQYKDKRK--DAVKKVIAAMTVGK-----DVSSLFTDVVNCMQ 61
Query: 81 SRDIGLRRMVYL-MIKELSPSADEVIIVTSSLMKDMTSKTDMYRANAIRVLCRITDGTLL 139
+ ++ L+++VYL +I D I+ ++ +KD + RA A+R + I +
Sbjct: 62 TENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRALAVRTMGCIRVDKIT 121
Query: 140 TQIERYLKQAIVDKNPVVASAALVSGIHLLQTTPEIV--KRWSNEVQEAVQSRAALVQFH 197
+ L++ + D +P V A + L E+V + + +++ + +V +
Sbjct: 122 EYLCDPLQKCLKDDDPYVRKTAAICVAKLFDINAELVEDRGFLEALKDLISDNNPMVVAN 181
Query: 198 ALALLHQIRQNDRLAV--------SKLVTSLTRGTVRSPLAQC-LLIRYTTQVIREAATT 248
A+A L +I++N + +KL+T+L T + L RY REA
Sbjct: 182 AVAALAEIQENSTSPIFEINSTILTKLLTALNECTEWGQVFILDALSRYKASDPREAENI 241
Query: 249 QTGDRPFYDFLESCLRHKAEMVIFEAARAITELNGVTN--RELTPAITVLQLFLSSSKPV 306
P + A +I + IT + + N +++ P + L S++P
Sbjct: 242 VERVTPRLQHANCAVVLSAVKMILQQMELITSTDVIRNLCKKMAPPLVTLL----SAEPE 297
Query: 307 LRFAAVRTLN 316
+++ A+R +N
Sbjct: 298 IQYVALRNIN 307
>ZFIN|ZDB-GENE-040426-1284 [details] [associations]
symbol:ap4b1 "adaptor-related protein complex 4,
beta 1 subunit" species:7955 "Danio rerio" [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0030117 "membrane coat"
evidence=IEA] [GO:0030131 "clathrin adaptor complex" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=IEA]
InterPro:IPR002553 InterPro:IPR015151 InterPro:IPR016024
InterPro:IPR016342 InterPro:IPR026739 Pfam:PF01602 Pfam:PF09066
PIRSF:PIRSF002291 SMART:SM01020 ZFIN:ZDB-GENE-040426-1284
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016192 GO:GO:0008565 eggNOG:COG5096 GO:GO:0030131
PANTHER:PTHR11134 CTD:10717 HOGENOM:HOG000294128 HOVERGEN:HBG050521
KO:K12401 OrthoDB:EOG48KR9Z EMBL:BC053128 IPI:IPI00488851
RefSeq:NP_956632.1 UniGene:Dr.80194 ProteinModelPortal:Q7T3G3
STRING:Q7T3G3 PRIDE:Q7T3G3 GeneID:393309 KEGG:dre:393309
NextBio:20814361 ArrayExpress:Q7T3G3 Bgee:Q7T3G3 Uniprot:Q7T3G3
Length = 729
Score = 136 (52.9 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 49/195 (25%), Positives = 88/195 (45%)
Query: 20 PFLGIEKGAVLQEARVFNDP--QLDPRRCSQVITKLLYLLNQGETFTKIEATEVFFAVTK 77
P+ G E+ V + R ++P Q D R ITK++ + QG ++ + +F + K
Sbjct: 2 PYFGSEE-TVKELKRALSNPNVQADRLRYKSYITKVIRYMTQG-----LDVSALFMDMVK 55
Query: 78 LFQSRDIGLRRMVYL-MIKELSPSADEVIIVTSSLMKDMTSKTDMYRANAIRVLCRITDG 136
+ DI +++VYL M S D ++ ++L KD M R A+R +C
Sbjct: 56 ASATVDIVQKKLVYLYMCTYASDKPDLALLAINTLRKDCADPNPMVRGLALRNMCNFRMP 115
Query: 137 TLLTQIERYLKQAIVDKNPVVASAALV--SGIHLLQTTPEIVKRWSNEVQEAVQSRAALV 194
+ IE+ + + DK V A++ + +H LQ EI NE+ ++ +V
Sbjct: 116 GMTEYIEQPIVAGLRDKASYVRRVAVLGCAKMHSLQPRTEIDGSLVNELYALLRDPDPVV 175
Query: 195 QFHALALLHQIRQND 209
+ L L I +++
Sbjct: 176 VVNCLRALEDILKDE 190
Score = 48 (22.0 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 10/38 (26%), Positives = 21/38 (55%)
Query: 378 PLKYRSLMNFLSNILREEGGFEYKKAIVDSIVILIRDI 415
P+ + + L +IL++EGG K I ++ ++D+
Sbjct: 173 PVVVVNCLRALEDILKDEGGVVINKPIAHHLLNRLKDL 210
>UNIPROTKB|B1ALD2 [details] [associations]
symbol:AP4B1 "AP-4 complex subunit beta-1" species:9606
"Homo sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0005802
"trans-Golgi network" evidence=IEA] InterPro:IPR002553
InterPro:IPR016024 InterPro:IPR026739 Pfam:PF01602 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0030117
GO:GO:0016192 GO:GO:0005802 PANTHER:PTHR11134 EMBL:AL137856
UniGene:Hs.515048 HGNC:HGNC:572 HOGENOM:HOG000294128
IPI:IPI00643929 SMR:B1ALD2 STRING:B1ALD2 Ensembl:ENST00000369571
HOVERGEN:HBG091836 Uniprot:B1ALD2
Length = 262
Score = 128 (50.1 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 47/202 (23%), Positives = 94/202 (46%)
Query: 20 PFLGIEKGAVLQEARVFNDP--QLDPRRCSQVITKLLYLLNQGETFTKIEATEVFFAVTK 77
P+LG E V + + +P Q D R VI +++ + QG ++ + VF + K
Sbjct: 2 PYLGSED-VVKELKKALCNPHIQADRLRYRNVIQRVIRYMTQG-----LDMSGVFMEMVK 55
Query: 78 LFQSRDIGLRRMVYLMIKELSP-SADEVIIVTSSLMKDMTSKTDMYRANAIRVLCRITDG 136
+ DI +++VYL + +P D ++ ++L KD + M R A+R +C +
Sbjct: 56 ASATVDIVQKKLVYLYMCTYAPLKPDLALLAINTLCKDCSDPNPMVRGLALRSMCSLRMP 115
Query: 137 TLLTQIERYLKQAIVDKNPVVASAALV--SGIHLLQTTPEIVKRWSNEVQEAVQSRAALV 194
+ I++ + + DK V A++ + +H L E+ NE+ ++ + +V
Sbjct: 116 GVQEYIQQPILNGLRDKASYVRRVAVLGCAKMHNLHGDSEVDGALVNELYSLLRDQDPIV 175
Query: 195 QFHALALLHQI-RQNDRLAVSK 215
+ L L +I +Q + ++K
Sbjct: 176 VVNCLRSLEEILKQEGGVVINK 197
>RGD|2064 [details] [associations]
symbol:Ap1b1 "adaptor-related protein complex 1, beta 1 subunit"
species:10116 "Rattus norvegicus" [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006897 "endocytosis" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0030118 "clathrin
coat" evidence=IC] [GO:0030131 "clathrin adaptor complex"
evidence=IEA] [GO:0030276 "clathrin binding" evidence=IC] [GO:0030665
"clathrin-coated vesicle membrane" evidence=IEA] [GO:0048268
"clathrin coat assembly" evidence=IDA] InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR009028 InterPro:IPR013037
InterPro:IPR015151 InterPro:IPR016024 InterPro:IPR016342
InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883 Pfam:PF09066
PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020 InterPro:IPR013041
RGD:2064 GO:GO:0005794 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0008565 GO:GO:0006897
GO:GO:0030276 GO:GO:0030118 GO:GO:0048268 eggNOG:COG5096
HOGENOM:HOG000163270 HOVERGEN:HBG050515 GO:GO:0030131 GO:GO:0030665
Gene3D:2.60.40.1150 Gene3D:3.30.310.10 InterPro:IPR012295
PANTHER:PTHR11134 SUPFAM:SSF55711 SUPFAM:SSF49348 CTD:162 KO:K12392
EMBL:M77245 IPI:IPI00201713 IPI:IPI00781585 PIR:B32105
RefSeq:NP_058973.1 UniGene:Rn.37383 PDB:1W63 PDBsum:1W63
ProteinModelPortal:P52303 SMR:P52303 IntAct:P52303 MINT:MINT-1344522
STRING:P52303 PhosphoSite:P52303 PRIDE:P52303 GeneID:29663
KEGG:rno:29663 UCSC:RGD:2064 EvolutionaryTrace:P52303 NextBio:609967
ArrayExpress:P52303 Genevestigator:P52303
GermOnline:ENSRNOG00000008786 Uniprot:P52303
Length = 949
Score = 109 (43.4 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 61/316 (19%), Positives = 139/316 (43%)
Query: 21 FLGIEKGAVLQEARVFNDPQLDPRRCSQVITKLLYLLNQGETFTKIEATEVFFAVTKLFQ 80
F +KG + + N + + ++ + + K++ + G+ + + +F V Q
Sbjct: 7 FTTTKKGEIFELKAELNSDKKEKKK--EAVKKVIASMTVGK-----DVSALFPDVVNCMQ 59
Query: 81 SRDIGLRRMVYLMIKELSPSA-DEVIIVTSSLMKDMTSKTDMYRANAIRVLCRITDGTLL 139
+ ++ L+++VYL + + S D I+ ++ +KD + RA A+R + I +
Sbjct: 60 TDNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCEDPNPLIRALAVRTMGCIRVDKIT 119
Query: 140 TQIERYLKQAIVDKNPVVASAALVSGIHLLQTTPEIVKR--WSNEVQEAVQSRAALVQFH 197
+ L++ + D++P V A V L ++V+ + + +++ + +V +
Sbjct: 120 EYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQLVEDQGFLDTLKDLISDSNPMVVAN 179
Query: 198 ALALLHQIRQN-------DRLA--VSKLVTSLTRGTVRSPL--AQCLLIRYTTQVIREAA 246
+A L +I ++ D A ++KL+T+L T + + CL Y + REA
Sbjct: 180 RVAALSEIAESHPSSNLLDLKAQSINKLLTALNECTEWAQIFILDCLG-NYMPKDDREAQ 238
Query: 247 TTQTGDRPFYDFLESCLRHKAEMVIFEAARAITELNGVTNRELTPAITVLQ------LFL 300
+ P L H V+ A + + + + +++L T+L+ + L
Sbjct: 239 SICERVTPR-------LSHANSAVVLSAVKVLMKFMEMLSKDLDYYATLLKKLAPPLVTL 291
Query: 301 SSSKPVLRFAAVRTLN 316
S++P ++ +R +N
Sbjct: 292 LSAEPEPQYVPLRNIN 307
Score = 78 (32.5 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 32/203 (15%), Positives = 89/203 (43%)
Query: 337 KTGNESSVDRLMKQITNFMSDIADEFKIVVVEAIRSLCLKFPLKYRSLMNFLSNILREEG 396
+ +++++ +++ ++ + +++ +F V AI +K ++ L ++++ +
Sbjct: 344 RLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKV 403
Query: 397 GFEYKKAIVDSIVILIRDIPDAKENGLLHLCEFIEDCEFTYLSTQILHFLGTEGPKTSDP 456
+ ++AIV I + R P+ E+ + LCE ++ + ++ +G + +
Sbjct: 404 NYVVQEAIV-VIKDIFRKYPNKYESVIATLCENLDSLDEPEARAAMIWIVGEYAERIDNA 462
Query: 457 SKYIRYIYNRVHLENATVRAAAVSTLAK-FGAMVDALKPRVFVLLRRCLYDGDDEEPAEQ 515
+ + + H E+ V+ ++ + K F + V +L D D+ + ++
Sbjct: 463 DELLESFLDGFHDESTQVQLQLLTAIVKLFLKKPTETQELVQQVLSLATQDSDNPDLRDR 522
Query: 516 PFD----INSVPKEVKTQPLAEK 534
+ +++ P K LAEK
Sbjct: 523 GYIYWRLLSTDPVAAKEVVLAEK 545
>UNIPROTKB|P52303 [details] [associations]
symbol:Ap1b1 "AP-1 complex subunit beta-1" species:10116
"Rattus norvegicus" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0030131 "clathrin adaptor complex" evidence=IEA]
InterPro:IPR002553 InterPro:IPR008152 InterPro:IPR009028
InterPro:IPR013037 InterPro:IPR015151 InterPro:IPR016024
InterPro:IPR016342 InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883
Pfam:PF09066 PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020
InterPro:IPR013041 RGD:2064 GO:GO:0005794 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0008565
GO:GO:0006897 GO:GO:0030276 GO:GO:0030118 GO:GO:0048268
eggNOG:COG5096 HOGENOM:HOG000163270 HOVERGEN:HBG050515
GO:GO:0030131 GO:GO:0030665 Gene3D:2.60.40.1150 Gene3D:3.30.310.10
InterPro:IPR012295 PANTHER:PTHR11134 SUPFAM:SSF55711
SUPFAM:SSF49348 CTD:162 KO:K12392 EMBL:M77245 IPI:IPI00201713
IPI:IPI00781585 PIR:B32105 RefSeq:NP_058973.1 UniGene:Rn.37383
PDB:1W63 PDBsum:1W63 ProteinModelPortal:P52303 SMR:P52303
IntAct:P52303 MINT:MINT-1344522 STRING:P52303 PhosphoSite:P52303
PRIDE:P52303 GeneID:29663 KEGG:rno:29663 UCSC:RGD:2064
EvolutionaryTrace:P52303 NextBio:609967 ArrayExpress:P52303
Genevestigator:P52303 GermOnline:ENSRNOG00000008786 Uniprot:P52303
Length = 949
Score = 109 (43.4 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 61/316 (19%), Positives = 139/316 (43%)
Query: 21 FLGIEKGAVLQEARVFNDPQLDPRRCSQVITKLLYLLNQGETFTKIEATEVFFAVTKLFQ 80
F +KG + + N + + ++ + + K++ + G+ + + +F V Q
Sbjct: 7 FTTTKKGEIFELKAELNSDKKEKKK--EAVKKVIASMTVGK-----DVSALFPDVVNCMQ 59
Query: 81 SRDIGLRRMVYLMIKELSPSA-DEVIIVTSSLMKDMTSKTDMYRANAIRVLCRITDGTLL 139
+ ++ L+++VYL + + S D I+ ++ +KD + RA A+R + I +
Sbjct: 60 TDNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCEDPNPLIRALAVRTMGCIRVDKIT 119
Query: 140 TQIERYLKQAIVDKNPVVASAALVSGIHLLQTTPEIVKR--WSNEVQEAVQSRAALVQFH 197
+ L++ + D++P V A V L ++V+ + + +++ + +V +
Sbjct: 120 EYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQLVEDQGFLDTLKDLISDSNPMVVAN 179
Query: 198 ALALLHQIRQN-------DRLA--VSKLVTSLTRGTVRSPL--AQCLLIRYTTQVIREAA 246
+A L +I ++ D A ++KL+T+L T + + CL Y + REA
Sbjct: 180 RVAALSEIAESHPSSNLLDLKAQSINKLLTALNECTEWAQIFILDCLG-NYMPKDDREAQ 238
Query: 247 TTQTGDRPFYDFLESCLRHKAEMVIFEAARAITELNGVTNRELTPAITVLQ------LFL 300
+ P L H V+ A + + + + +++L T+L+ + L
Sbjct: 239 SICERVTPR-------LSHANSAVVLSAVKVLMKFMEMLSKDLDYYATLLKKLAPPLVTL 291
Query: 301 SSSKPVLRFAAVRTLN 316
S++P ++ +R +N
Sbjct: 292 LSAEPEPQYVPLRNIN 307
Score = 78 (32.5 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 32/203 (15%), Positives = 89/203 (43%)
Query: 337 KTGNESSVDRLMKQITNFMSDIADEFKIVVVEAIRSLCLKFPLKYRSLMNFLSNILREEG 396
+ +++++ +++ ++ + +++ +F V AI +K ++ L ++++ +
Sbjct: 344 RLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKV 403
Query: 397 GFEYKKAIVDSIVILIRDIPDAKENGLLHLCEFIEDCEFTYLSTQILHFLGTEGPKTSDP 456
+ ++AIV I + R P+ E+ + LCE ++ + ++ +G + +
Sbjct: 404 NYVVQEAIV-VIKDIFRKYPNKYESVIATLCENLDSLDEPEARAAMIWIVGEYAERIDNA 462
Query: 457 SKYIRYIYNRVHLENATVRAAAVSTLAK-FGAMVDALKPRVFVLLRRCLYDGDDEEPAEQ 515
+ + + H E+ V+ ++ + K F + V +L D D+ + ++
Sbjct: 463 DELLESFLDGFHDESTQVQLQLLTAIVKLFLKKPTETQELVQQVLSLATQDSDNPDLRDR 522
Query: 516 PFD----INSVPKEVKTQPLAEK 534
+ +++ P K LAEK
Sbjct: 523 GYIYWRLLSTDPVAAKEVVLAEK 545
>UNIPROTKB|Q7Z451 [details] [associations]
symbol:AP2B1 "AP-2 complex subunit beta" species:9606 "Homo
sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030131 "clathrin adaptor complex" evidence=IEA]
InterPro:IPR002553 InterPro:IPR008152 InterPro:IPR009028
InterPro:IPR013037 InterPro:IPR015151 InterPro:IPR016024
InterPro:IPR016342 InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883
Pfam:PF09066 PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020
InterPro:IPR013041 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0016192 GO:GO:0008565 HOVERGEN:HBG050515
GO:GO:0030131 Gene3D:2.60.40.1150 Gene3D:3.30.310.10
InterPro:IPR012295 PANTHER:PTHR11134 SUPFAM:SSF55711
SUPFAM:SSF49348 EMBL:AC006237 EMBL:CH471147 UniGene:Hs.514819
HGNC:HGNC:563 ChiTaRS:AP2B1 EMBL:AC015911 EMBL:AC004134
EMBL:AY341427 IPI:IPI00790702 SMR:Q7Z451 STRING:Q7Z451
Ensembl:ENST00000538556 Uniprot:Q7Z451
Length = 880
Score = 113 (44.8 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 55/251 (21%), Positives = 109/251 (43%)
Query: 80 QSRDIGLRRMVYLMIKELSPSA-DEVIIVTSSLMKDMTSKTDMYRANAIRVLCRITDGTL 138
Q+ ++ L+++VYL + + S D I+ +S +KD + RA A+R + I +
Sbjct: 2 QTDNLELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDPNPLIRALAVRTMGCIRVDKI 61
Query: 139 LTQIERYLKQAIVDKNPVVASAALVSGIHLLQTTPEIVKR--WSNEVQEAVQSRAALVQF 196
+ L++ + D++P V A V L ++V+ + + +++ + +V
Sbjct: 62 TEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVA 121
Query: 197 HALALLHQIRQ---NDRLA------VSKLVTSLTRGTVRSPL--AQCLLIRYTTQVIREA 245
+A+A L +I + N L ++KL+T+L T + CL Y + REA
Sbjct: 122 NAVAALSEISESHPNSNLLDLNPQNINKLLTALNECTEWGQIFILDCLS-NYNPKDDREA 180
Query: 246 ATTQTGDRPFYDFLESCLRHKAEMVIFEAARAITELNGVTNRELTPAITVLQLFLSSSKP 305
+ P S + A V+ + + + + N L L LS +P
Sbjct: 181 QSICERVTPRLSHANSAVVLSAVKVLMKFLELLPKDSDYYNMLLKKLAPPLVTLLSG-EP 239
Query: 306 VLRFAAVRTLN 316
+++ A+R +N
Sbjct: 240 EVQYVALRNIN 250
Score = 73 (30.8 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 21/148 (14%), Positives = 67/148 (45%)
Query: 337 KTGNESSVDRLMKQITNFMSDIADEFKIVVVEAIRSLCLKFPLKYRSLMNFLSNILREEG 396
+ +++++ +++ ++ + +++ +F V AI +K ++ L ++++ +
Sbjct: 287 RLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKV 346
Query: 397 GFEYKKAIVDSIVILIRDIPDAKENGLLHLCEFIEDCEFTYLSTQILHFLGTEGPKTSDP 456
+ ++AIV I + R P+ E+ + LCE ++ + ++ +G + +
Sbjct: 347 NYVVQEAIV-VIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERIDNA 405
Query: 457 SKYIRYIYNRVHLENATVRAAAVSTLAK 484
+ + H E+ V+ ++ + K
Sbjct: 406 DELLESFLEGFHDESTQVQLTLLTAIVK 433
>UNIPROTKB|E2RRJ6 [details] [associations]
symbol:AP1B1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030131 "clathrin adaptor complex"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] InterPro:IPR002553 InterPro:IPR008152
InterPro:IPR009028 InterPro:IPR013037 InterPro:IPR015151
InterPro:IPR016024 InterPro:IPR016342 InterPro:IPR026739
Pfam:PF01602 Pfam:PF02883 Pfam:PF09066 PIRSF:PIRSF002291
SMART:SM00809 SMART:SM01020 InterPro:IPR013041 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
GO:GO:0008565 GO:GO:0030131 Gene3D:2.60.40.1150 Gene3D:3.30.310.10
InterPro:IPR012295 PANTHER:PTHR11134 SUPFAM:SSF55711
SUPFAM:SSF49348 OMA:PGNPSCT GeneTree:ENSGT00530000063138
EMBL:AAEX03014791 EMBL:AAEX03014790 ProteinModelPortal:E2RRJ6
Ensembl:ENSCAFT00000019193 NextBio:20860135 Uniprot:E2RRJ6
Length = 939
Score = 135 (52.6 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 64/313 (20%), Positives = 141/313 (45%)
Query: 21 FLGIEKGAVLQEARVFNDPQLDPRRCSQVITKLLYLLNQGETFTKIEATEVFFAVTKLFQ 80
F +KG + + N + + ++ + + K++ + G+ + + +F V Q
Sbjct: 7 FTTTKKGEIFELKAELNSDKKEKKK--EAVKKVIASMTVGK-----DVSALFPDVVNCMQ 59
Query: 81 SRDIGLRRMVYLMIKELSPSA-DEVIIVTSSLMKDMTSKTDMYRANAIRVLCRITDGTLL 139
+ ++ L+++VYL + + S D I+ ++ +KD + RA A+R + I +
Sbjct: 60 TDNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCEDPNPLIRALAVRTMGCIRVDKIT 119
Query: 140 TQIERYLKQAIVDKNPVVASAALVSGIHLLQTTPEIVKR--WSNEVQEAVQSRAALVQFH 197
+ L++ + D++P V A V L ++V+ + + +++ + +V +
Sbjct: 120 EYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQLVEDQGFLDTLKDLISDSNPMVVAN 179
Query: 198 ALALLHQIRQN---DRL------AVSKLVTSLTRGTVRSPL--AQCLLIRYTTQVIREAA 246
A+A L +I ++ L +++KL+T+L T + CL YT + REA
Sbjct: 180 AVAALSEIAESHPSSNLLDLNPQSINKLLTALNECTEWGQIFILDCLA-NYTPKDDREAQ 238
Query: 247 TTQTGDRPFYDFLESCLRHKAEMVIFEAARAIT-ELN--GVTNRELTPAITVLQLFLSSS 303
+ P S + A V+ + ++ +L+ G ++L P + L S+
Sbjct: 239 SICERVTPRLSHANSAVVLSAVKVLMKFMEMLSKDLDYYGTLLKKLAPPLVTLL----SA 294
Query: 304 KPVLRFAAVRTLN 316
+P L++ A+R +N
Sbjct: 295 EPELQYVALRNIN 307
>UNIPROTKB|F1MIF2 [details] [associations]
symbol:AP1B1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0030131 "clathrin adaptor complex" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR009028 InterPro:IPR013037
InterPro:IPR015151 InterPro:IPR016024 InterPro:IPR016342
InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883 Pfam:PF09066
PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020 InterPro:IPR013041
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016192 GO:GO:0008565 GO:GO:0030131 Gene3D:2.60.40.1150
Gene3D:3.30.310.10 InterPro:IPR012295 PANTHER:PTHR11134
SUPFAM:SSF55711 SUPFAM:SSF49348 GeneTree:ENSGT00530000063138
OMA:KECENAD EMBL:DAAA02045602 IPI:IPI00690120 UniGene:Bt.35586
Ensembl:ENSBTAT00000001576 Uniprot:F1MIF2
Length = 946
Score = 135 (52.6 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 64/313 (20%), Positives = 141/313 (45%)
Query: 21 FLGIEKGAVLQEARVFNDPQLDPRRCSQVITKLLYLLNQGETFTKIEATEVFFAVTKLFQ 80
F +KG + + N + + ++ + + K++ + G+ + + +F V Q
Sbjct: 7 FTTTKKGEIFELKAELNSDKKEKKK--EAVKKVIASMTVGK-----DVSALFPDVVNCMQ 59
Query: 81 SRDIGLRRMVYLMIKELSPSA-DEVIIVTSSLMKDMTSKTDMYRANAIRVLCRITDGTLL 139
+ ++ L+++VYL + + S D I+ ++ +KD + RA A+R + I +
Sbjct: 60 TDNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCEDPNPLIRALAVRTMGCIRVDKIT 119
Query: 140 TQIERYLKQAIVDKNPVVASAALVSGIHLLQTTPEIVKR--WSNEVQEAVQSRAALVQFH 197
+ L++ + D++P V A V L ++V+ + + +++ + +V +
Sbjct: 120 EYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQLVEDQGFLDTLKDLISDSNPMVVAN 179
Query: 198 ALALLHQIRQN---DRL------AVSKLVTSLTRGTVRSPL--AQCLLIRYTTQVIREAA 246
A+A L +I ++ L +++KL+T+L T + CL YT + REA
Sbjct: 180 AVAALSEIAESHPSSNLLDLNPQSINKLLTALNECTEWGQIFILDCLA-NYTPKDDREAQ 238
Query: 247 TTQTGDRPFYDFLESCLRHKAEMVIFEAARAIT-ELN--GVTNRELTPAITVLQLFLSSS 303
+ P S + A V+ + ++ +L+ G ++L P + L S+
Sbjct: 239 SICERVTPRLSHANSAVVLSAVKVLMKFMEMLSKDLDYYGTLLKKLAPPLVTLL----SA 294
Query: 304 KPVLRFAAVRTLN 316
+P L++ A+R +N
Sbjct: 295 EPELQYVALRNIN 307
>UNIPROTKB|F1RFI2 [details] [associations]
symbol:AP1B1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030131 "clathrin adaptor complex" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR009028 InterPro:IPR013037
InterPro:IPR015151 InterPro:IPR016024 InterPro:IPR016342
InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883 Pfam:PF09066
PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020 InterPro:IPR013041
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016192 GO:GO:0008565 GO:GO:0030131 Gene3D:2.60.40.1150
Gene3D:3.30.310.10 InterPro:IPR012295 PANTHER:PTHR11134
SUPFAM:SSF55711 SUPFAM:SSF49348 GeneTree:ENSGT00530000063138
EMBL:CU640468 Ensembl:ENSSSCT00000010934 Uniprot:F1RFI2
Length = 947
Score = 135 (52.6 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 64/313 (20%), Positives = 141/313 (45%)
Query: 21 FLGIEKGAVLQEARVFNDPQLDPRRCSQVITKLLYLLNQGETFTKIEATEVFFAVTKLFQ 80
F +KG + + N + + ++ + + K++ + G+ + + +F V Q
Sbjct: 7 FTTTKKGEIFELKAELNSDKKEKKK--EAVKKVIASMTVGK-----DVSALFPDVVNCMQ 59
Query: 81 SRDIGLRRMVYLMIKELSPSA-DEVIIVTSSLMKDMTSKTDMYRANAIRVLCRITDGTLL 139
+ ++ L+++VYL + + S D I+ ++ +KD + RA A+R + I +
Sbjct: 60 TDNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCEDPNPLIRALAVRTMGCIRVDKIT 119
Query: 140 TQIERYLKQAIVDKNPVVASAALVSGIHLLQTTPEIVKR--WSNEVQEAVQSRAALVQFH 197
+ L++ + D++P V A V L ++V+ + + +++ + +V +
Sbjct: 120 EYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQLVEDQGFLDTLKDLISDSNPMVVAN 179
Query: 198 ALALLHQIRQN---DRL------AVSKLVTSLTRGTVRSPL--AQCLLIRYTTQVIREAA 246
A+A L +I ++ L +++KL+T+L T + CL YT + REA
Sbjct: 180 AVAALSEIAESHPSSNLLDLNPQSINKLLTALNECTEWGQIFILDCLA-NYTPKDDREAQ 238
Query: 247 TTQTGDRPFYDFLESCLRHKAEMVIFEAARAIT-ELN--GVTNRELTPAITVLQLFLSSS 303
+ P S + A V+ + ++ +L+ G ++L P + L S+
Sbjct: 239 SICERVTPRLSHANSAVVLSAVKVLMKFMEMLSKDLDYYGTLLKKLAPPLVTLL----SA 294
Query: 304 KPVLRFAAVRTLN 316
+P L++ A+R +N
Sbjct: 295 EPELQYVALRNIN 307
>UNIPROTKB|I3LV02 [details] [associations]
symbol:AP1B1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030131 "clathrin adaptor complex" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR009028 InterPro:IPR013037
InterPro:IPR015151 InterPro:IPR016024 InterPro:IPR016342
InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883 Pfam:PF09066
PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020 InterPro:IPR013041
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016192 GO:GO:0008565 GO:GO:0030131 Gene3D:2.60.40.1150
Gene3D:3.30.310.10 InterPro:IPR012295 PANTHER:PTHR11134
SUPFAM:SSF55711 SUPFAM:SSF49348 GeneTree:ENSGT00530000063138
OMA:KECENAD EMBL:CU640468 Ensembl:ENSSSCT00000028355 Uniprot:I3LV02
Length = 949
Score = 135 (52.6 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 64/313 (20%), Positives = 141/313 (45%)
Query: 21 FLGIEKGAVLQEARVFNDPQLDPRRCSQVITKLLYLLNQGETFTKIEATEVFFAVTKLFQ 80
F +KG + + N + + ++ + + K++ + G+ + + +F V Q
Sbjct: 7 FTTTKKGEIFELKAELNSDKKEKKK--EAVKKVIASMTVGK-----DVSALFPDVVNCMQ 59
Query: 81 SRDIGLRRMVYLMIKELSPSA-DEVIIVTSSLMKDMTSKTDMYRANAIRVLCRITDGTLL 139
+ ++ L+++VYL + + S D I+ ++ +KD + RA A+R + I +
Sbjct: 60 TDNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCEDPNPLIRALAVRTMGCIRVDKIT 119
Query: 140 TQIERYLKQAIVDKNPVVASAALVSGIHLLQTTPEIVKR--WSNEVQEAVQSRAALVQFH 197
+ L++ + D++P V A V L ++V+ + + +++ + +V +
Sbjct: 120 EYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQLVEDQGFLDTLKDLISDSNPMVVAN 179
Query: 198 ALALLHQIRQN---DRL------AVSKLVTSLTRGTVRSPL--AQCLLIRYTTQVIREAA 246
A+A L +I ++ L +++KL+T+L T + CL YT + REA
Sbjct: 180 AVAALSEIAESHPSSNLLDLNPQSINKLLTALNECTEWGQIFILDCLA-NYTPKDDREAQ 238
Query: 247 TTQTGDRPFYDFLESCLRHKAEMVIFEAARAIT-ELN--GVTNRELTPAITVLQLFLSSS 303
+ P S + A V+ + ++ +L+ G ++L P + L S+
Sbjct: 239 SICERVTPRLSHANSAVVLSAVKVLMKFMEMLSKDLDYYGTLLKKLAPPLVTLL----SA 294
Query: 304 KPVLRFAAVRTLN 316
+P L++ A+R +N
Sbjct: 295 EPELQYVALRNIN 307
>RGD|1310529 [details] [associations]
symbol:Ap4b1 "adaptor-related protein complex 4, beta 1 subunit"
species:10116 "Rattus norvegicus" [GO:0005802 "trans-Golgi network"
evidence=IEA;ISO] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030131 "clathrin adaptor complex" evidence=IEA]
InterPro:IPR002553 InterPro:IPR015151 InterPro:IPR016024
InterPro:IPR016342 InterPro:IPR026739 Pfam:PF01602 Pfam:PF09066
PIRSF:PIRSF002291 SMART:SM01020 RGD:1310529 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
GO:GO:0008565 GO:GO:0005802 GO:GO:0030131 PANTHER:PTHR11134
GeneTree:ENSGT00530000063138 CTD:10717 KO:K12401 OrthoDB:EOG48KR9Z
OMA:EQFEKTW EMBL:CH474015 IPI:IPI00197290 RefSeq:NP_001101179.1
UniGene:Rn.8746 Ensembl:ENSRNOT00000026382 GeneID:310746
KEGG:rno:310746 UCSC:RGD:1310529 NextBio:662544 Uniprot:D4AD35
Length = 739
Score = 133 (51.9 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 49/206 (23%), Positives = 98/206 (47%)
Query: 20 PFLGIEKGAVLQEARVFNDP--QLDPRRCSQVITKLLYLLNQGETFTKIEATEVFFAVTK 77
P+LG E V + + +P Q D R VI +++ + QG ++ ++VF + K
Sbjct: 2 PYLGSED-VVKELKKALCNPHIQADRLRYRNVIQRVIRHMTQG-----LDMSDVFMEMVK 55
Query: 78 LFQSRDIGLRRMVYLMIKELSP-SADEVIIVTSSLMKDMTSKTDMYRANAIRVLCRITDG 136
+ DI +++VYL + +P D ++ ++L KD + M R A+R +C +
Sbjct: 56 ASATVDIVQKKLVYLYMGTYAPLKPDLALLAINTLCKDCSDPNPMVRGLALRSMCSLR-- 113
Query: 137 TLLTQIERYLKQAIV----DKNPVVASAALV--SGIHLLQTTPEIVKRWSNEVQEAVQSR 190
+ ++ Y++Q +V DK V A++ + +H L E+ NE+ ++ +
Sbjct: 114 --MPGVQEYIQQPVVNGLRDKASYVRRVAVLGCAKMHNLHGDSEVDGALVNELYSLLRDQ 171
Query: 191 AALVQFHALALLHQI-RQNDRLAVSK 215
+V + L L +I +Q + ++K
Sbjct: 172 DPIVVVNCLRSLEEILKQEGGVVINK 197
>ZFIN|ZDB-GENE-061025-1 [details] [associations]
symbol:ap1b1 "adaptor-related protein complex 1, beta
1 subunit" species:7955 "Danio rerio" [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
[GO:0030131 "clathrin adaptor complex" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR002553 InterPro:IPR008152 InterPro:IPR009028
InterPro:IPR013037 InterPro:IPR015151 InterPro:IPR016024
InterPro:IPR016342 InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883
Pfam:PF09066 PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020
InterPro:IPR013041 ZFIN:ZDB-GENE-061025-1 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
GO:GO:0008565 eggNOG:COG5096 HOGENOM:HOG000163270
HOVERGEN:HBG050515 OrthoDB:EOG4PG607 GO:GO:0030131
Gene3D:2.60.40.1150 Gene3D:3.30.310.10 InterPro:IPR012295
PANTHER:PTHR11134 SUPFAM:SSF55711 SUPFAM:SSF49348 CTD:162 KO:K12392
OMA:PGNPSCT GeneTree:ENSGT00530000063138 EMBL:BX664747
IPI:IPI00897502 RefSeq:NP_001122002.1 UniGene:Dr.31764 SMR:A5PMS9
Ensembl:ENSDART00000022518 Ensembl:ENSDART00000137128 GeneID:562166
KEGG:dre:562166 NextBio:20884280 Uniprot:A5PMS9
Length = 947
Score = 134 (52.2 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 64/313 (20%), Positives = 139/313 (44%)
Query: 21 FLGIEKGAVLQEARVFNDPQLDPRRCSQVITKLLYLLNQGETFTKIEATEVFFAVTKLFQ 80
F +KG + + N + + ++ + + K++ + G+ + + +F V Q
Sbjct: 7 FTTTKKGEIFELKAELNSDKKEKKK--EAVKKVIASMTVGK-----DVSALFPDVVNCMQ 59
Query: 81 SRDIGLRRMVYLMIKELSPSA-DEVIIVTSSLMKDMTSKTDMYRANAIRVLCRITDGTLL 139
+ ++ L+++VYL + + S D I+ ++ +KD + RA A+R + I +
Sbjct: 60 TDNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCEDPNPLIRALAVRTMGCIRVDKIT 119
Query: 140 TQIERYLKQAIVDKNPVVASAALVSGIHLLQTTPEIVKR--WSNEVQEAVQSRAALVQFH 197
+ L++ + D++P V A V L ++V+ + + +++ + +V +
Sbjct: 120 EYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQLVEDQGFLDTLKDLISDSNPMVVAN 179
Query: 198 ALALLHQIRQ---NDRL------AVSKLVTSLTRGTVRSPL--AQCLLIRYTTQVIREAA 246
A+A L +I + N L ++KL+T+L T + CL YT + RE+
Sbjct: 180 AVAALSEIAESHPNSNLLDLNPQTINKLLTALNECTEWGQIFILDCLA-NYTPRDDRESQ 238
Query: 247 TTQTGDRPFYDFLESCLRHKAEMVIFEAARAIT-ELN--GVTNRELTPAITVLQLFLSSS 303
+ P S + A V+ + + +L+ G ++L P + L S+
Sbjct: 239 SICERVTPRLSHANSAVVLSAVKVLMKFMEMLPKDLDYYGTLLKKLAPPLVTLL----SA 294
Query: 304 KPVLRFAAVRTLN 316
+P L++ A+R +N
Sbjct: 295 EPELQYVALRNIN 307
>UNIPROTKB|F1SBR2 [details] [associations]
symbol:AP4B1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005802 "trans-Golgi network" evidence=IEA] [GO:0030131
"clathrin adaptor complex" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0008565 "protein
transporter activity" evidence=IEA] [GO:0006886 "intracellular
protein transport" evidence=IEA] InterPro:IPR002553
InterPro:IPR015151 InterPro:IPR016024 InterPro:IPR016342
InterPro:IPR026739 Pfam:PF01602 Pfam:PF09066 PIRSF:PIRSF002291
SMART:SM01020 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0016192 GO:GO:0008565 GO:GO:0005802
GO:GO:0030131 PANTHER:PTHR11134 GeneTree:ENSGT00530000063138
CTD:10717 KO:K12401 OMA:EQFEKTW EMBL:CU651648 RefSeq:XP_003125886.1
UniGene:Ssc.38340 Ensembl:ENSSSCT00000007408 GeneID:100516855
KEGG:ssc:100516855 Uniprot:F1SBR2
Length = 737
Score = 131 (51.2 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 48/202 (23%), Positives = 95/202 (47%)
Query: 20 PFLGIEKGAVLQEARVFNDP--QLDPRRCSQVITKLLYLLNQGETFTKIEATEVFFAVTK 77
P+LG E V + + +P Q D R VI +++ + QG ++ + VF + K
Sbjct: 2 PYLGSED-VVKELKKALCNPHIQADRLRYRNVIQRVIRHMTQG-----LDMSGVFMEMVK 55
Query: 78 LFQSRDIGLRRMVYLMIKELSP-SADEVIIVTSSLMKDMTSKTDMYRANAIRVLCRITDG 136
+ DI +++VYL + +P D ++ ++L KD + M R A+R +C +
Sbjct: 56 ASATVDIVQKKLVYLYMCTYAPLKPDLALLAINTLCKDCSDPNPMVRGLALRSMCSLRMP 115
Query: 137 TLLTQIERYLKQAIVDKNPVVASAALV--SGIHLLQTTPEIVKRWSNEVQEAVQSRAALV 194
+ I++ + + DK V A++ + +H LQ E+ NE+ ++ + +V
Sbjct: 116 GVQEYIQQPILNGLRDKASYVRRVAVLGCAKMHNLQGDSEVDGALVNELYSLLRDQDPIV 175
Query: 195 QFHALALLHQI-RQNDRLAVSK 215
+ L L +I +Q + ++K
Sbjct: 176 VVNCLRSLEEILKQEGGVVINK 197
>UNIPROTKB|C9J1E7 [details] [associations]
symbol:AP1B1 "AP-1 complex subunit beta-1" species:9606
"Homo sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
InterPro:IPR002553 InterPro:IPR016024 InterPro:IPR016342
InterPro:IPR026739 Pfam:PF01602 PIRSF:PIRSF002291 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0030117
GO:GO:0016192 GO:GO:0008565 HOGENOM:HOG000163270 PANTHER:PTHR11134
EMBL:AC000041 EMBL:AC002059 HGNC:HGNC:554 ChiTaRS:AP1B1
IPI:IPI00946351 ProteinModelPortal:C9J1E7 SMR:C9J1E7 STRING:C9J1E7
PRIDE:C9J1E7 Ensembl:ENST00000421126 ArrayExpress:C9J1E7
Bgee:C9J1E7 Uniprot:C9J1E7
Length = 578
Score = 129 (50.5 bits), Expect = 0.00011, P = 0.00011
Identities = 63/313 (20%), Positives = 140/313 (44%)
Query: 21 FLGIEKGAVLQEARVFNDPQLDPRRCSQVITKLLYLLNQGETFTKIEATEVFFAVTKLFQ 80
F +KG + + N + + ++ + + K++ + G+ + + +F V Q
Sbjct: 7 FTTTKKGEIFELKAELNSDKKEKKK--EAVKKVIASMTVGK-----DVSALFPDVVNCMQ 59
Query: 81 SRDIGLRRMVYLMIKELSPSA-DEVIIVTSSLMKDMTSKTDMYRANAIRVLCRITDGTLL 139
+ ++ L+++VYL + + S D I+ ++ +KD + RA A+R + I +
Sbjct: 60 TDNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCEDPNPLIRALAVRTMGCIRVDKIT 119
Query: 140 TQIERYLKQAIVDKNPVVASAALVSGIHLLQTTPEIVKR--WSNEVQEAVQSRAALVQFH 197
+ L++ + D++P V A V L ++V+ + + +++ + +V +
Sbjct: 120 EYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQLVEDQGFLDTLKDLISDSNPMVVAN 179
Query: 198 ALALLHQIRQN---DRL------AVSKLVTSLTRGTVRSPL--AQCLLIRYTTQVIREAA 246
A+A L +I ++ L +++KL+T+L T + CL Y + REA
Sbjct: 180 AVAALSEIAESHPSSNLLDLNPQSINKLLTALNECTEWGQIFILDCLA-NYMPKDDREAQ 238
Query: 247 TTQTGDRPFYDFLESCLRHKAEMVIFEAARAIT-ELN--GVTNRELTPAITVLQLFLSSS 303
+ P S + A V+ + ++ +L+ G ++L P + L S+
Sbjct: 239 SICERVTPRLSHANSAVVLSAVKVLMKFMEMLSKDLDYYGTLLKKLAPPLVTLL----SA 294
Query: 304 KPVLRFAAVRTLN 316
+P L++ A+R +N
Sbjct: 295 EPELQYVALRNIN 307
>GENEDB_PFALCIPARUM|MAL7P1.164 [details] [associations]
symbol:MAL7P1.164 "adapter-related protein,
putative" species:5833 "Plasmodium falciparum" [GO:0030130
"clathrin coat of trans-Golgi network vesicle" evidence=ISS]
[GO:0016192 "vesicle-mediated transport" evidence=ISS]
InterPro:IPR002553 InterPro:IPR015151 InterPro:IPR016024
InterPro:IPR016342 InterPro:IPR026739 Pfam:PF01602 Pfam:PF09066
PIRSF:PIRSF002291 SMART:SM01020 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192 GO:GO:0008565
GO:GO:0030131 PANTHER:PTHR11134 GO:GO:0030130 EMBL:AL844506
RefSeq:XP_001349197.2 ProteinModelPortal:Q8IBF8
EnsemblProtists:MAL7P1.164:mRNA GeneID:2654988 KEGG:pfa:MAL7P1.164
EuPathDB:PlasmoDB:PF3D7_0730200 HOGENOM:HOG000283882
ProtClustDB:CLSZ2500660 Uniprot:Q8IBF8
Length = 858
Score = 126 (49.4 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 34/150 (22%), Positives = 77/150 (51%)
Query: 42 DPRRCSQVITKLLYLLNQGETFTKIEATEVFFAVTKLFQSRDIGLRRMVYLMIKELSPSA 101
D +R +V+ K++ + G ++ +++F + + + DI ++M+YL + + +
Sbjct: 25 DKKR--EVLKKVIAYMTLG-----VDVSKLFPDIIMISSTNDIIQKKMIYLYLNNYAETN 77
Query: 102 DEVIIVT-SSLMKDMTSKTDMYRANAIRVLCRITDGTLLTQIERYLKQAIVDKNPVVASA 160
E+ ++T ++L KD + R A+R C + L IE L + DKN V
Sbjct: 78 SELSLLTINTLQKDSKDDDPIIRGLALRTFCNLRINNLFEYIEGPLFNGLNDKNSYVRRI 137
Query: 161 ALVSGIHLLQTTPEIVKRWSNEVQEAVQSR 190
A++S + L++ P++ R N++ + ++++
Sbjct: 138 AIISCVKLIKMNPDLSIR--NDIIKILKNK 165
Score = 52 (23.4 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 13/54 (24%), Positives = 30/54 (55%)
Query: 340 NESSVDRLMKQITNFMSDIADEFKIVVVEAIRSLCLKFPLKYRSLMNF-LSNIL 392
++++V ++ +++ ++SD E +E+I S+ LK P ++ LSN +
Sbjct: 343 SKNNVVLIINELSEYISDANVEIAQKAIESIGSIALKIPKCISRVVELSLSNFM 396
>UNIPROTKB|Q8IBF8 [details] [associations]
symbol:MAL7P1.164 "Adapter-related protein, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0016192
"vesicle-mediated transport" evidence=ISS] [GO:0030130 "clathrin
coat of trans-Golgi network vesicle" evidence=ISS]
InterPro:IPR002553 InterPro:IPR015151 InterPro:IPR016024
InterPro:IPR016342 InterPro:IPR026739 Pfam:PF01602 Pfam:PF09066
PIRSF:PIRSF002291 SMART:SM01020 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192 GO:GO:0008565
GO:GO:0030131 PANTHER:PTHR11134 GO:GO:0030130 EMBL:AL844506
RefSeq:XP_001349197.2 ProteinModelPortal:Q8IBF8
EnsemblProtists:MAL7P1.164:mRNA GeneID:2654988 KEGG:pfa:MAL7P1.164
EuPathDB:PlasmoDB:PF3D7_0730200 HOGENOM:HOG000283882
ProtClustDB:CLSZ2500660 Uniprot:Q8IBF8
Length = 858
Score = 126 (49.4 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 34/150 (22%), Positives = 77/150 (51%)
Query: 42 DPRRCSQVITKLLYLLNQGETFTKIEATEVFFAVTKLFQSRDIGLRRMVYLMIKELSPSA 101
D +R +V+ K++ + G ++ +++F + + + DI ++M+YL + + +
Sbjct: 25 DKKR--EVLKKVIAYMTLG-----VDVSKLFPDIIMISSTNDIIQKKMIYLYLNNYAETN 77
Query: 102 DEVIIVT-SSLMKDMTSKTDMYRANAIRVLCRITDGTLLTQIERYLKQAIVDKNPVVASA 160
E+ ++T ++L KD + R A+R C + L IE L + DKN V
Sbjct: 78 SELSLLTINTLQKDSKDDDPIIRGLALRTFCNLRINNLFEYIEGPLFNGLNDKNSYVRRI 137
Query: 161 ALVSGIHLLQTTPEIVKRWSNEVQEAVQSR 190
A++S + L++ P++ R N++ + ++++
Sbjct: 138 AIISCVKLIKMNPDLSIR--NDIIKILKNK 165
Score = 52 (23.4 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 13/54 (24%), Positives = 30/54 (55%)
Query: 340 NESSVDRLMKQITNFMSDIADEFKIVVVEAIRSLCLKFPLKYRSLMNF-LSNIL 392
++++V ++ +++ ++SD E +E+I S+ LK P ++ LSN +
Sbjct: 343 SKNNVVLIINELSEYISDANVEIAQKAIESIGSIALKIPKCISRVVELSLSNFM 396
>UNIPROTKB|Q9Y6B7 [details] [associations]
symbol:AP4B1 "AP-4 complex subunit beta-1" species:9606
"Homo sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030131 "clathrin adaptor complex" evidence=IEA]
[GO:0005802 "trans-Golgi network" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0005215 "transporter activity"
evidence=TAS] Reactome:REACT_11123 InterPro:IPR002553
InterPro:IPR015151 InterPro:IPR016024 InterPro:IPR016342
InterPro:IPR026739 Pfam:PF01602 Pfam:PF09066 PIRSF:PIRSF002291
SMART:SM01020 GO:GO:0005794 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192 GO:GO:0008565
GO:GO:0005215 GO:GO:0005802 eggNOG:COG5096 GO:GO:0030131
Gene3D:3.30.310.10 InterPro:IPR012295 PANTHER:PTHR11134
EMBL:AF092094 EMBL:AB209817 EMBL:AL137856 EMBL:BC014146
IPI:IPI00002150 RefSeq:NP_001240781.1 RefSeq:NP_001240782.1
RefSeq:NP_006585.2 UniGene:Hs.515048 ProteinModelPortal:Q9Y6B7
SMR:Q9Y6B7 DIP:DIP-24209N IntAct:Q9Y6B7 STRING:Q9Y6B7
PhosphoSite:Q9Y6B7 DMDM:126302520 PaxDb:Q9Y6B7 PRIDE:Q9Y6B7
DNASU:10717 Ensembl:ENST00000256658 Ensembl:ENST00000369569
GeneID:10717 KEGG:hsa:10717 UCSC:uc001eeb.3 CTD:10717
GeneCards:GC01M114437 HGNC:HGNC:572 HPA:HPA028162 HPA:HPA028399
HPA:HPA028652 MIM:607245 MIM:614066 neXtProt:NX_Q9Y6B7
Orphanet:280763 PharmGKB:PA24864 HOGENOM:HOG000294128
HOVERGEN:HBG050521 InParanoid:Q9Y6B7 KO:K12401 OMA:RPWKAYL
OrthoDB:EOG48KR9Z PhylomeDB:Q9Y6B7 GenomeRNAi:10717 NextBio:40689
ArrayExpress:Q9Y6B7 Bgee:Q9Y6B7 CleanEx:HS_AP4B1
Genevestigator:Q9Y6B7 GermOnline:ENSG00000134262 Uniprot:Q9Y6B7
Length = 739
Score = 128 (50.1 bits), Expect = 0.00021, P = 0.00021
Identities = 47/202 (23%), Positives = 94/202 (46%)
Query: 20 PFLGIEKGAVLQEARVFNDP--QLDPRRCSQVITKLLYLLNQGETFTKIEATEVFFAVTK 77
P+LG E V + + +P Q D R VI +++ + QG ++ + VF + K
Sbjct: 2 PYLGSED-VVKELKKALCNPHIQADRLRYRNVIQRVIRYMTQG-----LDMSGVFMEMVK 55
Query: 78 LFQSRDIGLRRMVYLMIKELSP-SADEVIIVTSSLMKDMTSKTDMYRANAIRVLCRITDG 136
+ DI +++VYL + +P D ++ ++L KD + M R A+R +C +
Sbjct: 56 ASATVDIVQKKLVYLYMCTYAPLKPDLALLAINTLCKDCSDPNPMVRGLALRSMCSLRMP 115
Query: 137 TLLTQIERYLKQAIVDKNPVVASAALV--SGIHLLQTTPEIVKRWSNEVQEAVQSRAALV 194
+ I++ + + DK V A++ + +H L E+ NE+ ++ + +V
Sbjct: 116 GVQEYIQQPILNGLRDKASYVRRVAVLGCAKMHNLHGDSEVDGALVNELYSLLRDQDPIV 175
Query: 195 QFHALALLHQI-RQNDRLAVSK 215
+ L L +I +Q + ++K
Sbjct: 176 VVNCLRSLEEILKQEGGVVINK 197
>UNIPROTKB|F1PTH0 [details] [associations]
symbol:AP4B1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030131 "clathrin adaptor complex"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] InterPro:IPR002553 InterPro:IPR015151
InterPro:IPR016024 InterPro:IPR016342 InterPro:IPR026739
Pfam:PF01602 Pfam:PF09066 PIRSF:PIRSF002291 SMART:SM01020
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016192 GO:GO:0008565 GO:GO:0030131 Gene3D:3.30.310.10
InterPro:IPR012295 PANTHER:PTHR11134 GeneTree:ENSGT00530000063138
EMBL:AAEX03010988 EMBL:AAEX03010989 Ensembl:ENSCAFT00000014726
Uniprot:F1PTH0
Length = 903
Score = 129 (50.5 bits), Expect = 0.00021, P = 0.00021
Identities = 48/205 (23%), Positives = 95/205 (46%)
Query: 17 EYSPFLGIEKGAVLQEARVFNDP--QLDPRRCSQVITKLLYLLNQGETFTKIEATEVFFA 74
E P+LG E V + + +P Q D R VI +++ + QG ++ + VF
Sbjct: 164 ETMPYLGSED-VVKELKKALCNPHVQADRLRYRNVIQRVIRHMTQG-----LDVSGVFME 217
Query: 75 VTKLFQSRDIGLRRMVYLMIKELSP-SADEVIIVTSSLMKDMTSKTDMYRANAIRVLCRI 133
+ K + DI +++VYL + +P D ++ ++L KD + M R A+R +C +
Sbjct: 218 MVKASATVDIVQKKLVYLYMCTYAPLKPDLALLAINTLCKDCSDPNPMVRGLALRSMCSL 277
Query: 134 TDGTLLTQIERYLKQAIVDKNPVVASAALV--SGIHLLQTTPEIVKRWSNEVQEAVQSRA 191
+ I++ + + DK V A++ + +H L E+ NE+ ++ +
Sbjct: 278 RMPGVQEYIQQPILNGLRDKASYVRRVAVLGCAKMHNLHGDSEVDGALVNELYSLLRDQD 337
Query: 192 ALVQFHALALLHQI-RQNDRLAVSK 215
+V + L L +I +Q + ++K
Sbjct: 338 PIVVVNCLRSLEEILKQEGGVVINK 362
>UNIPROTKB|G4N974 [details] [associations]
symbol:MGG_03320 "AP-1 complex subunit beta-1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR002553 InterPro:IPR016024
InterPro:IPR016342 InterPro:IPR026739 Pfam:PF01602
PIRSF:PIRSF002291 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0030117 GO:GO:0016192 GO:GO:0008565
GO:GO:0043581 PANTHER:PTHR11134 EMBL:CM001234 RefSeq:XP_003716637.1
ProteinModelPortal:G4N974 SMR:G4N974 EnsemblFungi:MGG_03320T0
GeneID:2676863 KEGG:mgr:MGG_03320 Uniprot:G4N974
Length = 738
Score = 104 (41.7 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 54/266 (20%), Positives = 111/266 (41%)
Query: 67 EATEVFFAVTKLFQSRDIGLRRMVYLMIKELSPS-ADEVIIVTSSLMKDMTSKTDMYRAN 125
+ + +F V K + D+ +++VYL + + S D I+ ++ ++D + RA
Sbjct: 50 DVSALFPDVLKNIATADLDQKKLVYLYLMNYAKSHPDLCILAVNTFVQDSEDPNPLIRAL 109
Query: 126 AIRVLCRITDGTLLTQIERYLKQAIVDKNPVVASAALVSGIHLLQTTPE--IVKRWSNEV 183
AIR + I ++ +E L++ + D++P V A + L P I + +
Sbjct: 110 AIRTMGCIRVDKMVDYMEEPLRKTLRDESPYVRKTAAICVAKLFDLNPTMCIENGFLETL 169
Query: 184 QEAVQSRAALVQFHALALLHQIRQNDRLAVSKLVTSLTRGTVRSPLAQCLLIRYTTQVIR 243
QE + +V +++ L +I + + ++T T + L +C T+ R
Sbjct: 170 QELIGDPNPMVVANSVQALSEIAETAPETRALVITPATLKKLLMALNEC------TEWGR 223
Query: 244 EAATTQTGDRPFYDFLES---CLR------HKAEMVIFEAARAI----TELNGVTNRELT 290
+ D P D ES C R H V+ A + + +N + R+
Sbjct: 224 VTILSTLADYPPSDVKESEHVCERVAPQFQHVNPSVVLAAVKVVFIHMKVINPDSVRQYL 283
Query: 291 PAITVLQLFLSSSKPVLRFAAVRTLN 316
+ + L +S P +++ A+R ++
Sbjct: 284 KKMAPPLVTLVASAPEVQYVALRNID 309
Score = 73 (30.8 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 23/127 (18%), Positives = 58/127 (45%)
Query: 337 KTGNESSVDRLMKQITNFMSDIADEFKIVVVEAIRSLCLKFPLKYRSLMNFLSNILREEG 396
+ N+ + ++L+ ++ + ++ +F V+AI + +K +N L +++ +
Sbjct: 346 RIANDKNFEQLLAELKEYALEVDMDFVRRAVKAIGQVAIKIESASEKCVNALLDLMATKV 405
Query: 397 GFEYKKAIVDSIVILIRDIP---DAKENGLLHLCEFIEDCEFTYLSTQILHFLGTEGPKT 453
+ +V +V++I+DI E + LCE I++ + ++ +G K
Sbjct: 406 NY-----VVQEVVVVIKDILRKYPGYEGVIPTLCEHIDELDEPNARGSLIWIVGEYAEKI 460
Query: 454 SDPSKYI 460
S+ + I
Sbjct: 461 SNADEII 467
>MGI|MGI:1096368 [details] [associations]
symbol:Ap1b1 "adaptor protein complex AP-1, beta 1 subunit"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005802 "trans-Golgi network" evidence=TAS] [GO:0006810
"transport" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=TAS] [GO:0006897 "endocytosis" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=TAS] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030131
"clathrin adaptor complex" evidence=IEA] [GO:0031410 "cytoplasmic
vesicle" evidence=IEA] [GO:0048268 "clathrin coat assembly"
evidence=ISO] InterPro:IPR002553 InterPro:IPR008152
InterPro:IPR009028 InterPro:IPR013037 InterPro:IPR015151
InterPro:IPR016024 InterPro:IPR016342 InterPro:IPR026739
Pfam:PF01602 Pfam:PF02883 Pfam:PF09066 PIRSF:PIRSF002291
SMART:SM00809 SMART:SM01020 InterPro:IPR013041 MGI:MGI:1096368
GO:GO:0005794 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0016192 GO:GO:0008565 EMBL:CH466574
GO:GO:0006897 GO:GO:0005802 eggNOG:COG5096 HOGENOM:HOG000163270
HOVERGEN:HBG050515 GO:GO:0030131 GO:GO:0030665 Gene3D:2.60.40.1150
Gene3D:3.30.310.10 InterPro:IPR012295 PANTHER:PTHR11134
SUPFAM:SSF55711 SUPFAM:SSF49348 CTD:162 KO:K12392 OMA:PGNPSCT
ChiTaRS:AP1B1 EMBL:Y07919 EMBL:AK159273 EMBL:BC008513
IPI:IPI00346965 RefSeq:NP_031480.2 UniGene:Mm.274816
ProteinModelPortal:O35643 SMR:O35643 IntAct:O35643 STRING:O35643
PhosphoSite:O35643 PaxDb:O35643 PRIDE:O35643
Ensembl:ENSMUST00000009234 GeneID:11764 KEGG:mmu:11764
GeneTree:ENSGT00530000063138 NextBio:279521 Bgee:O35643
CleanEx:MM_AP1B1 Genevestigator:O35643 Uniprot:O35643
Length = 943
Score = 127 (49.8 bits), Expect = 0.00036, P = 0.00036
Identities = 63/316 (19%), Positives = 141/316 (44%)
Query: 21 FLGIEKGAVLQEARVFNDPQLDPRRCSQVITKLLYLLNQGETFTKIEATEVFFAVTKLFQ 80
F +KG + + N + + ++ + + K++ + G+ + + +F V Q
Sbjct: 7 FTTTKKGEIFELKAELNSDKKEKKK--EAVKKVIASMTVGK-----DVSALFPDVVNCMQ 59
Query: 81 SRDIGLRRMVYLMIKELSPSA-DEVIIVTSSLMKDMTSKTDMYRANAIRVLCRITDGTLL 139
+ ++ L+++VYL + + S D I+ ++ +KD + RA A+R + I +
Sbjct: 60 TDNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCEDPNPLIRALAVRTMGCIRVDKIT 119
Query: 140 TQIERYLKQAIVDKNPVVASAALVSGIHLLQTTPEIVKR--WSNEVQEAVQSRAALVQFH 197
+ L++ + D++P V A V L ++V+ + + +++ + +V +
Sbjct: 120 EYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQLVEDQGFLDTLKDLISDSNPMVVAN 179
Query: 198 ALALLHQIRQN---DRL------AVSKLVTSLTRGTVRSPL--AQCLLIRYTTQVIREAA 246
A+A L +I ++ L +++KL+T+L T + CL Y + REA
Sbjct: 180 AVAALSEIAESHPSSNLLDLNPQSINKLLTALNECTEWGQIFILDCLA-NYMPKDDREAQ 238
Query: 247 TTQTGDRPFYDFLESCLRHKAEMVIFEAARAITELNGVTNRELTPAITVLQ------LFL 300
+ P L H V+ A + + + + +++L T+L+ + L
Sbjct: 239 SICERVTPR-------LSHANSAVVLSAVKVLMKFMEMLSKDLDYYATLLKKLAPPLVTL 291
Query: 301 SSSKPVLRFAAVRTLN 316
S++P L++ A+R +N
Sbjct: 292 LSAEPELQYVALRNIN 307
>ASPGD|ASPL0000034670 [details] [associations]
symbol:AN3029 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0030117 "membrane
coat" evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] InterPro:IPR002553 InterPro:IPR016024
InterPro:IPR016342 InterPro:IPR026739 Pfam:PF01602
PIRSF:PIRSF002291 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0030117 GO:GO:0016192 GO:GO:0008565
EMBL:BN001306 EMBL:AACD01000051 eggNOG:COG5096 HOGENOM:HOG000163270
PANTHER:PTHR11134 OMA:KECENAD OrthoDB:EOG49GPQW RefSeq:XP_660633.1
ProteinModelPortal:Q5B8V1 SMR:Q5B8V1 STRING:Q5B8V1
EnsemblFungi:CADANIAT00010050 GeneID:2873851 KEGG:ani:AN3029.2
Uniprot:Q5B8V1
Length = 766
Score = 104 (41.7 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 54/264 (20%), Positives = 110/264 (41%)
Query: 67 EATEVFFAVTKLFQSRDIGLRRMVYLMIKELSPS-ADEVIIVTSSLMKDMTSKTDMYRAN 125
+ + +F V K + D+ +++VYL + + S D I+ ++ ++D + RA
Sbjct: 49 DVSALFPDVLKNIATSDLEQKKLVYLYLMNYAKSHPDLCILAVNTFVQDSEDPNPLIRAL 108
Query: 126 AIRVLCRITDGTLLTQIERYLKQAIVDKNPVVASAALVSGIHLLQTTPEIVKR--WSNEV 183
AIR + I ++ +E L++ + D++P V A + L P + + +
Sbjct: 109 AIRTMGCIRVDKMIDYMEEPLRKTLRDESPYVRKTAAICVAKLFDLGPAMCLENGFLEML 168
Query: 184 QEAVQSRAALVQFHALALLHQIR----QNDRLAVS-----KLVTSLTRGTVRSPLA-QCL 233
QE + +V +++ L +I + L V+ KL+ +L T +
Sbjct: 169 QEMIGDPNPMVVANSVTALSEIHHAAPETQALQVTPNTLRKLLMALNECTEWGRVTILTT 228
Query: 234 LIRYTTQVIREAATTQTGDRPFYDFLESCLRHKAEMVIFEAARAIT-ELNGVTNRELTPA 292
L Y T + EA P + + A +F + I EL+ +++ P
Sbjct: 229 LSEYRTSAVNEAEQICERVAPQFQHANPSVVLAAVKTVFLHMKIINAELSKNYLKKMAPP 288
Query: 293 ITVLQLFLSSSKPVLRFAAVRTLN 316
+ L SS P +++ A+R ++
Sbjct: 289 LVTLV----SSAPEVQYVALRNID 308
Score = 71 (30.1 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 23/119 (19%), Positives = 55/119 (46%)
Query: 337 KTGNESSVDRLMKQITNFMSDIADEFKIVVVEAIRSLCLKFPLKYRSLMNFLSNILREEG 396
+ N+ + D+L+ ++ + ++ +F V+AI + +K +N L +++ +
Sbjct: 345 RIANDRNFDQLLAELREYALEVDMDFVRRAVKAIGQVAIKIESACEKCVNTLLDLINTKV 404
Query: 397 GFEYKKAIVDSIVILIRDIPDAKENGLLHLCEFIEDCEFTYLSTQILHFLGTEGPKTSD 455
+ ++AIV I + R P E + LC+ I++ + ++ +G K S+
Sbjct: 405 NYVVQEAIV-VIKDIFRKYP-GYEGIIPTLCKCIDELDEPNARAALIWIVGEYAEKISN 461
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.135 0.379 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 822 776 0.00093 121 3 11 22 0.38 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 69
No. of states in DFA: 611 (65 KB)
Total size of DFA: 339 KB (2172 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 58.93u 0.09s 59.02t Elapsed: 00:00:03
Total cpu time: 58.95u 0.09s 59.04t Elapsed: 00:00:03
Start: Tue May 21 04:31:12 2013 End: Tue May 21 04:31:15 2013