Query 003425
Match_columns 821
No_of_seqs 1085 out of 5442
Neff 9.9
Searched_HMMs 46136
Date Thu Mar 28 23:11:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003425.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/003425hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03192 Voltage-dependent pot 100.0 7E-115 1E-119 1026.7 79.3 751 60-821 48-820 (823)
2 KOG0498 K+-channel ERG and rel 100.0 2E-83 4.3E-88 704.0 45.3 542 61-605 65-642 (727)
3 KOG0500 Cyclic nucleotide-gate 100.0 6.1E-64 1.3E-68 506.1 32.0 417 81-510 4-433 (536)
4 KOG0501 K+-channel KCNQ [Inorg 100.0 7.7E-62 1.7E-66 494.8 29.7 443 59-512 203-670 (971)
5 KOG0499 Cyclic nucleotide-gate 100.0 1E-58 2.2E-63 473.9 34.1 431 55-510 209-651 (815)
6 KOG4412 26S proteasome regulat 100.0 2.1E-36 4.6E-41 265.6 13.6 177 534-711 33-213 (226)
7 KOG4412 26S proteasome regulat 100.0 8.1E-36 1.8E-40 261.9 14.2 197 539-735 3-205 (226)
8 PHA02791 ankyrin-like protein; 100.0 5.1E-34 1.1E-38 290.6 23.0 198 534-735 25-227 (284)
9 PHA02791 ankyrin-like protein; 100.0 8.4E-32 1.8E-36 274.3 22.0 216 503-729 29-247 (284)
10 KOG0509 Ankyrin repeat and DHH 100.0 4.5E-32 9.8E-37 285.4 16.4 208 536-743 41-253 (600)
11 PHA02878 ankyrin repeat protei 100.0 2.2E-31 4.8E-36 299.0 23.2 206 536-743 34-308 (477)
12 PHA02875 ankyrin repeat protei 100.0 4E-31 8.7E-36 292.3 24.2 224 506-731 4-231 (413)
13 PHA02874 ankyrin repeat protei 100.0 9.6E-31 2.1E-35 290.4 25.5 234 506-743 37-296 (434)
14 PHA02875 ankyrin repeat protei 100.0 8.4E-31 1.8E-35 289.8 24.2 199 539-737 2-203 (413)
15 PHA03100 ankyrin repeat protei 100.0 6.1E-31 1.3E-35 297.5 22.9 218 511-730 80-311 (480)
16 PHA03100 ankyrin repeat protei 100.0 6.8E-31 1.5E-35 297.1 22.9 239 503-743 34-291 (480)
17 PHA02946 ankyin-like protein; 100.0 2E-30 4.4E-35 284.7 23.9 206 519-728 54-269 (446)
18 PHA03095 ankyrin-like protein; 100.0 3.1E-30 6.8E-35 291.1 23.5 237 504-742 47-297 (471)
19 KOG0509 Ankyrin repeat and DHH 100.0 4.9E-31 1.1E-35 277.6 15.6 201 511-712 51-255 (600)
20 PHA02946 ankyin-like protein; 100.0 6.8E-30 1.5E-34 280.5 22.2 202 539-742 37-249 (446)
21 PHA02798 ankyrin-like protein; 100.0 8.5E-30 1.8E-34 286.6 23.3 212 517-730 51-319 (489)
22 PHA02716 CPXV016; CPX019; EVM0 100.0 8.2E-30 1.8E-34 286.9 22.3 225 519-745 194-545 (764)
23 KOG3713 Voltage-gated K+ chann 100.0 4.6E-30 9.9E-35 264.0 14.7 236 51-324 168-436 (477)
24 PHA02878 ankyrin repeat protei 100.0 6.3E-29 1.4E-33 279.1 24.2 215 507-725 40-324 (477)
25 PHA02716 CPXV016; CPX019; EVM0 100.0 3.9E-29 8.4E-34 281.5 22.2 209 532-740 169-404 (764)
26 PHA03095 ankyrin-like protein; 100.0 1.1E-28 2.3E-33 278.7 24.0 224 518-743 28-265 (471)
27 PHA02874 ankyrin repeat protei 100.0 1.6E-28 3.4E-33 272.7 24.0 235 507-744 4-263 (434)
28 KOG0510 Ankyrin repeat protein 100.0 5.2E-29 1.1E-33 266.6 19.0 234 506-741 156-416 (929)
29 PHA02876 ankyrin repeat protei 100.0 1.2E-28 2.5E-33 289.3 23.5 213 530-742 264-483 (682)
30 PHA02795 ankyrin-like protein; 100.0 2.9E-28 6.2E-33 256.7 23.1 185 545-731 83-291 (437)
31 PHA02989 ankyrin repeat protei 100.0 2.4E-28 5.1E-33 275.3 23.7 189 539-727 69-314 (494)
32 PHA02859 ankyrin repeat protei 100.0 2.5E-28 5.4E-33 240.6 19.8 175 536-713 18-203 (209)
33 PHA02876 ankyrin repeat protei 100.0 5.2E-28 1.1E-32 283.8 25.1 229 511-741 152-414 (682)
34 PHA02989 ankyrin repeat protei 100.0 4.4E-28 9.6E-33 273.0 22.6 222 518-743 17-297 (494)
35 KOG0510 Ankyrin repeat protein 100.0 2.1E-28 4.6E-33 261.9 18.2 221 518-740 135-382 (929)
36 PHA02798 ankyrin-like protein; 100.0 8.6E-28 1.9E-32 270.3 21.9 200 544-743 43-299 (489)
37 KOG0508 Ankyrin repeat protein 100.0 1.6E-28 3.5E-33 246.7 13.8 190 535-725 38-238 (615)
38 PLN03192 Voltage-dependent pot 100.0 5.8E-26 1.3E-30 269.6 34.9 186 550-739 505-693 (823)
39 PHA02917 ankyrin-like protein; 99.9 1.5E-26 3.3E-31 263.4 21.1 194 533-729 26-257 (661)
40 KOG0508 Ankyrin repeat protein 99.9 5.7E-27 1.2E-31 235.7 13.2 197 545-742 10-222 (615)
41 KOG0502 Integral membrane anky 99.9 6.7E-27 1.5E-31 212.1 11.9 201 534-737 91-293 (296)
42 PHA02730 ankyrin-like protein; 99.9 1E-25 2.2E-30 248.7 20.7 190 534-723 36-258 (672)
43 PHA02859 ankyrin repeat protei 99.9 1.1E-25 2.5E-30 221.7 18.5 173 569-744 18-201 (209)
44 PHA02792 ankyrin-like protein; 99.9 4.3E-25 9.2E-30 241.1 19.9 234 507-742 74-450 (631)
45 KOG4177 Ankyrin [Cell wall/mem 99.9 2.2E-26 4.8E-31 263.2 10.0 196 532-727 433-631 (1143)
46 PHA02917 ankyrin-like protein; 99.9 4.4E-25 9.6E-30 251.4 20.6 192 552-743 12-237 (661)
47 KOG4177 Ankyrin [Cell wall/mem 99.9 2.8E-25 6E-30 254.3 15.1 211 532-742 400-613 (1143)
48 PHA02795 ankyrin-like protein; 99.9 8.2E-25 1.8E-29 230.7 17.0 184 555-743 65-262 (437)
49 PHA02730 ankyrin-like protein; 99.9 4E-24 8.8E-29 236.2 21.1 194 547-740 210-501 (672)
50 KOG1419 Voltage-gated K+ chann 99.9 1.3E-25 2.7E-30 230.6 7.8 273 50-357 70-355 (654)
51 PHA02792 ankyrin-like protein; 99.9 2.2E-23 4.7E-28 227.8 20.0 200 528-729 164-480 (631)
52 KOG1545 Voltage-gated shaker-l 99.9 1.8E-25 4E-30 217.1 -0.9 179 104-320 254-448 (507)
53 TIGR00870 trp transient-recept 99.9 3.7E-23 8.1E-28 244.7 17.5 219 507-729 20-284 (743)
54 KOG0514 Ankyrin repeat protein 99.9 2.5E-23 5.3E-28 203.3 11.6 159 565-724 261-429 (452)
55 KOG0505 Myosin phosphatase, re 99.9 9.6E-23 2.1E-27 210.4 14.1 200 541-740 42-269 (527)
56 KOG0502 Integral membrane anky 99.9 2.6E-23 5.6E-28 188.9 8.1 201 540-740 63-264 (296)
57 KOG0507 CASK-interacting adapt 99.9 5.4E-23 1.2E-27 219.2 11.2 210 530-740 40-259 (854)
58 TIGR00870 trp transient-recept 99.9 3.2E-22 6.9E-27 236.8 16.9 200 537-740 15-262 (743)
59 KOG0505 Myosin phosphatase, re 99.9 3.6E-22 7.7E-27 206.3 11.9 205 515-722 51-283 (527)
60 PHA02743 Viral ankyrin protein 99.9 1.7E-21 3.8E-26 184.5 14.4 148 561-736 9-162 (166)
61 KOG0507 CASK-interacting adapt 99.9 1.2E-21 2.5E-26 209.0 12.4 217 503-722 48-277 (854)
62 PHA02741 hypothetical protein; 99.9 1.2E-20 2.6E-25 179.9 15.7 137 565-728 14-158 (169)
63 KOG0514 Ankyrin repeat protein 99.8 2.1E-21 4.5E-26 189.9 9.8 162 529-691 258-429 (452)
64 PHA02743 Viral ankyrin protein 99.8 1.1E-20 2.4E-25 179.0 14.1 123 594-743 9-136 (166)
65 PHA02884 ankyrin repeat protei 99.8 6.2E-20 1.4E-24 186.8 16.7 153 567-727 27-187 (300)
66 PHA02884 ankyrin repeat protei 99.8 1.5E-19 3.3E-24 183.9 15.0 147 539-693 33-186 (300)
67 PHA02741 hypothetical protein; 99.8 1.3E-19 2.8E-24 172.7 13.7 134 532-695 14-158 (169)
68 PHA02736 Viral ankyrin protein 99.8 9.4E-20 2E-24 171.3 11.7 94 636-729 55-153 (154)
69 KOG0512 Fetal globin-inducing 99.8 2E-19 4.3E-24 157.7 12.5 143 540-713 64-209 (228)
70 PHA02736 Viral ankyrin protein 99.8 2.8E-19 6.1E-24 168.1 10.6 96 601-696 51-153 (154)
71 KOG4390 Voltage-gated A-type K 99.8 1E-21 2.2E-26 192.7 -6.9 227 56-320 166-411 (632)
72 KOG3676 Ca2+-permeable cation 99.8 1.2E-18 2.6E-23 189.3 15.8 237 541-789 103-394 (782)
73 KOG0195 Integrin-linked kinase 99.8 3.9E-19 8.3E-24 168.3 7.4 133 597-729 26-160 (448)
74 KOG4369 RTK signaling protein 99.7 1.8E-18 3.9E-23 189.6 8.0 207 534-740 752-964 (2131)
75 KOG4369 RTK signaling protein 99.7 4.6E-18 9.9E-23 186.6 8.0 202 530-731 781-988 (2131)
76 KOG0195 Integrin-linked kinase 99.7 1.4E-17 3E-22 157.8 7.6 121 523-643 18-140 (448)
77 KOG0512 Fetal globin-inducing 99.7 8E-17 1.7E-21 141.4 11.6 145 505-680 64-209 (228)
78 PF12796 Ank_2: Ankyrin repeat 99.7 1.4E-16 3.1E-21 134.3 10.9 89 543-635 1-89 (89)
79 PF12796 Ank_2: Ankyrin repeat 99.7 2.1E-16 4.5E-21 133.3 11.1 87 610-698 2-88 (89)
80 KOG3676 Ca2+-permeable cation 99.7 9.1E-16 2E-20 167.1 15.2 186 528-713 132-368 (782)
81 cd00204 ANK ankyrin repeats; 99.6 3.7E-15 7.9E-20 135.0 14.8 124 568-722 3-126 (126)
82 cd00204 ANK ankyrin repeats; 99.6 6.2E-15 1.3E-19 133.5 14.6 124 535-689 3-126 (126)
83 PF11834 DUF3354: Domain of un 99.6 4.7E-15 1E-19 112.5 7.6 68 747-817 2-69 (69)
84 PRK09392 ftrB transcriptional 99.6 2.5E-14 5.4E-19 145.1 13.3 126 387-513 7-132 (236)
85 PF00520 Ion_trans: Ion transp 99.6 2.2E-14 4.7E-19 141.9 11.8 187 107-314 1-200 (200)
86 KOG4214 Myotrophin and similar 99.5 1.5E-14 3.3E-19 113.2 7.7 98 609-706 6-104 (117)
87 KOG4214 Myotrophin and similar 99.5 2.9E-14 6.2E-19 111.6 7.9 101 639-740 5-105 (117)
88 cd00038 CAP_ED effector domain 99.5 7.6E-14 1.6E-18 124.1 11.9 114 394-507 1-114 (115)
89 COG0666 Arp FOG: Ankyrin repea 99.5 2.3E-13 5E-18 137.9 16.3 135 565-725 66-203 (235)
90 PRK11753 DNA-binding transcrip 99.5 2.5E-13 5.5E-18 135.4 13.6 118 396-513 6-124 (211)
91 PF00027 cNMP_binding: Cyclic 99.5 1.5E-13 3.4E-18 116.5 9.0 91 412-502 1-91 (91)
92 PRK10402 DNA-binding transcrip 99.5 2.7E-13 5.8E-18 136.1 10.7 112 402-513 23-134 (226)
93 COG0666 Arp FOG: Ankyrin repea 99.4 5.1E-13 1.1E-17 135.3 12.5 131 531-692 65-203 (235)
94 smart00100 cNMP Cyclic nucleot 99.4 1.2E-12 2.7E-17 117.1 12.7 116 394-509 1-118 (120)
95 PF13857 Ank_5: Ankyrin repeat 99.4 1.3E-13 2.8E-18 103.6 4.8 55 655-709 1-56 (56)
96 COG0664 Crp cAMP-binding prote 99.4 2.1E-12 4.5E-17 129.2 12.9 125 390-514 3-127 (214)
97 PRK11161 fumarate/nitrate redu 99.4 2.3E-12 5E-17 130.6 13.3 125 389-514 15-140 (235)
98 PF13857 Ank_5: Ankyrin repeat 99.4 5E-13 1.1E-17 100.4 4.7 55 558-612 1-56 (56)
99 KOG1113 cAMP-dependent protein 99.4 1E-12 2.2E-17 130.1 7.7 126 386-516 121-246 (368)
100 KOG0515 p53-interacting protei 99.4 1.7E-12 3.6E-17 133.4 9.5 115 542-656 553-672 (752)
101 PF13637 Ank_4: Ankyrin repeat 99.4 1.5E-12 3.3E-17 97.4 6.4 54 669-722 1-54 (54)
102 PTZ00322 6-phosphofructo-2-kin 99.4 4.4E-12 9.4E-17 146.6 13.4 103 638-740 84-193 (664)
103 PF07885 Ion_trans_2: Ion chan 99.3 8.7E-12 1.9E-16 101.6 10.4 55 265-319 24-78 (79)
104 KOG1710 MYND Zn-finger and ank 99.3 8.2E-12 1.8E-16 119.1 10.8 59 541-599 14-72 (396)
105 PF13637 Ank_4: Ankyrin repeat 99.3 3.4E-12 7.4E-17 95.5 6.5 54 572-625 1-54 (54)
106 PTZ00322 6-phosphofructo-2-kin 99.3 8.2E-12 1.8E-16 144.3 12.2 102 540-641 83-193 (664)
107 KOG0515 p53-interacting protei 99.3 4.4E-12 9.5E-17 130.4 8.5 95 640-734 554-648 (752)
108 KOG1710 MYND Zn-finger and ank 99.3 1.5E-11 3.2E-16 117.4 11.3 115 511-627 19-134 (396)
109 KOG0614 cGMP-dependent protein 99.3 2.8E-12 6.1E-17 132.4 6.8 123 383-505 268-392 (732)
110 KOG1420 Ca2+-activated K+ chan 99.3 1E-12 2.3E-17 136.0 3.5 181 105-321 164-344 (1103)
111 COG2905 Predicted signal-trans 99.3 6E-11 1.3E-15 124.9 15.3 125 386-514 6-130 (610)
112 TIGR03697 NtcA_cyano global ni 99.3 2.9E-11 6.3E-16 118.6 11.0 96 418-513 1-98 (193)
113 PLN02868 acyl-CoA thioesterase 99.2 3.7E-11 8E-16 131.5 11.7 113 386-501 7-119 (413)
114 PRK09391 fixK transcriptional 99.2 6.1E-11 1.3E-15 119.2 11.1 105 406-513 34-138 (230)
115 KOG0818 GTPase-activating prot 99.2 2.4E-11 5.2E-16 124.1 4.9 159 639-821 136-303 (669)
116 PRK13918 CRP/FNR family transc 99.1 2.1E-10 4.6E-15 113.3 10.4 98 409-513 5-104 (202)
117 KOG0614 cGMP-dependent protein 99.1 4.9E-11 1.1E-15 123.4 5.9 114 383-501 150-263 (732)
118 KOG1113 cAMP-dependent protein 99.0 3.8E-10 8.3E-15 112.1 6.3 118 382-503 235-352 (368)
119 PRK10537 voltage-gated potassi 98.9 3.2E-08 7E-13 105.8 17.0 54 265-318 168-221 (393)
120 KOG0506 Glutaminase (contains 98.8 9.1E-09 2E-13 105.2 7.2 96 533-628 500-596 (622)
121 KOG0818 GTPase-activating prot 98.8 2.5E-08 5.5E-13 102.4 9.8 87 540-626 134-221 (669)
122 KOG0506 Glutaminase (contains 98.8 7.7E-09 1.7E-13 105.7 5.6 90 637-726 507-597 (622)
123 PF13606 Ank_3: Ankyrin repeat 98.7 2E-08 4.4E-13 63.8 3.9 30 668-697 1-30 (30)
124 KOG0705 GTPase-activating prot 98.7 9.2E-08 2E-12 100.3 10.5 90 640-729 628-721 (749)
125 KOG0782 Predicted diacylglycer 98.6 8.1E-08 1.8E-12 100.1 8.1 91 635-725 898-990 (1004)
126 PF13606 Ank_3: Ankyrin repeat 98.6 4.6E-08 9.9E-13 62.2 4.0 29 571-599 1-29 (30)
127 PF00023 Ank: Ankyrin repeat H 98.6 5.2E-08 1.1E-12 64.1 4.2 33 668-700 1-33 (33)
128 KOG2302 T-type voltage-gated C 98.6 2.5E-06 5.4E-11 94.7 18.6 123 62-195 1103-1242(1956)
129 KOG0783 Uncharacterized conser 98.6 4.1E-08 8.9E-13 107.0 3.9 81 598-678 45-128 (1267)
130 PF00023 Ank: Ankyrin repeat H 98.5 1.1E-07 2.4E-12 62.5 4.4 32 571-602 1-32 (33)
131 KOG0705 GTPase-activating prot 98.5 2E-07 4.3E-12 97.9 8.0 98 534-631 619-720 (749)
132 KOG0782 Predicted diacylglycer 98.5 2E-07 4.4E-12 97.2 7.9 97 595-691 889-989 (1004)
133 KOG0522 Ankyrin repeat protein 98.5 2.6E-07 5.7E-12 96.8 8.2 86 639-724 23-110 (560)
134 KOG0783 Uncharacterized conser 98.4 1.5E-07 3.3E-12 102.7 4.5 83 532-614 45-128 (1267)
135 KOG3609 Receptor-activated Ca2 98.4 1.1E-06 2.4E-11 97.7 11.0 133 538-698 24-160 (822)
136 KOG3684 Ca2+-activated K+ chan 98.4 8.1E-06 1.8E-10 84.5 16.4 56 263-318 285-340 (489)
137 KOG0522 Ankyrin repeat protein 98.4 5.9E-07 1.3E-11 94.2 7.7 87 541-627 22-110 (560)
138 KOG2968 Predicted esterase of 98.3 5.1E-07 1.1E-11 99.9 4.4 113 402-514 500-612 (1158)
139 KOG0521 Putative GTPase activa 98.3 4.6E-07 1E-11 104.1 4.2 90 635-724 655-744 (785)
140 KOG2384 Major histocompatibili 98.3 2.6E-06 5.6E-11 77.3 7.3 70 659-728 2-72 (223)
141 PF01007 IRK: Inward rectifier 98.2 7.5E-06 1.6E-10 85.3 11.0 99 210-321 39-142 (336)
142 PF08412 Ion_trans_N: Ion tran 98.1 3.9E-06 8.4E-11 65.8 4.3 40 62-101 35-74 (77)
143 KOG3609 Receptor-activated Ca2 98.1 1.4E-05 3.1E-10 89.2 10.1 134 572-733 25-162 (822)
144 KOG0511 Ankyrin repeat protein 98.0 1.1E-05 2.4E-10 80.9 7.3 75 540-615 37-111 (516)
145 KOG0520 Uncharacterized conser 98.0 7.9E-06 1.7E-10 93.2 6.4 128 566-724 568-702 (975)
146 KOG0520 Uncharacterized conser 98.0 1.1E-05 2.3E-10 92.1 6.8 128 530-658 565-702 (975)
147 KOG0511 Ankyrin repeat protein 98.0 2.8E-05 6.1E-10 78.0 8.5 69 638-706 38-106 (516)
148 KOG0521 Putative GTPase activa 97.9 9.7E-06 2.1E-10 93.5 5.1 91 533-623 650-740 (785)
149 KOG2384 Major histocompatibili 97.9 2.5E-05 5.5E-10 71.0 6.6 67 562-628 2-69 (223)
150 KOG1418 Tandem pore domain K+ 97.8 0.00019 4E-09 80.3 12.7 56 265-320 115-170 (433)
151 KOG4404 Tandem pore domain K+ 97.7 0.00015 3.3E-09 72.0 9.1 56 265-320 186-249 (350)
152 KOG2968 Predicted esterase of 97.6 0.00019 4E-09 80.3 8.6 108 406-513 111-225 (1158)
153 KOG3193 K+ channel subunit [In 97.4 7.4E-05 1.6E-09 78.3 2.4 51 266-316 218-268 (1087)
154 KOG4404 Tandem pore domain K+ 97.2 0.00017 3.7E-09 71.6 1.9 50 265-314 80-129 (350)
155 PF04831 Popeye: Popeye protei 97.2 0.006 1.3E-07 54.3 11.2 105 397-506 14-125 (153)
156 KOG3827 Inward rectifier K+ ch 97.1 0.0033 7.2E-08 64.3 10.0 100 209-321 66-170 (400)
157 KOG2301 Voltage-gated Ca2+ cha 97.0 0.008 1.7E-07 74.5 14.5 105 105-225 475-581 (1592)
158 KOG2505 Ankyrin repeat protein 97.0 0.0013 2.9E-08 68.9 6.2 72 648-722 403-480 (591)
159 PRK11832 putative DNA-binding 96.9 0.0088 1.9E-07 57.2 10.7 98 402-503 14-112 (207)
160 PLN03223 Polycystin cation cha 96.7 0.093 2E-06 62.5 18.8 54 69-122 1171-1232(1634)
161 KOG3614 Ca2+/Mg2+-permeable ca 96.7 0.064 1.4E-06 63.9 17.1 88 70-165 790-877 (1381)
162 KOG2505 Ankyrin repeat protein 96.5 0.0029 6.2E-08 66.5 4.7 65 549-613 401-471 (591)
163 smart00248 ANK ankyrin repeats 96.5 0.0049 1.1E-07 38.2 4.0 27 669-695 2-28 (30)
164 KOG2301 Voltage-gated Ca2+ cha 96.4 0.071 1.5E-06 66.5 16.4 135 77-226 843-983 (1592)
165 smart00248 ANK ankyrin repeats 96.3 0.0072 1.6E-07 37.4 4.0 27 572-598 2-28 (30)
166 KOG3542 cAMP-regulated guanine 95.8 0.025 5.3E-07 61.6 7.5 111 385-500 279-391 (1283)
167 PF03158 DUF249: Multigene fam 95.8 0.049 1.1E-06 50.3 8.3 44 673-722 147-190 (192)
168 PF06128 Shigella_OspC: Shigel 95.8 0.06 1.3E-06 51.1 9.0 45 649-693 230-278 (284)
169 PF06128 Shigella_OspC: Shigel 95.5 0.074 1.6E-06 50.5 8.4 114 609-728 157-280 (284)
170 PF03158 DUF249: Multigene fam 95.2 0.22 4.8E-06 46.1 10.4 137 540-690 47-191 (192)
171 KOG1418 Tandem pore domain K+ 94.4 0.0083 1.8E-07 66.9 -1.0 47 265-311 242-296 (433)
172 KOG3542 cAMP-regulated guanine 93.0 0.12 2.5E-06 56.6 4.6 104 373-489 23-126 (1283)
173 KOG0498 K+-channel ERG and rel 92.0 16 0.00035 42.6 20.1 45 369-413 370-419 (727)
174 KOG2302 T-type voltage-gated C 91.9 4.3 9.4E-05 47.2 15.0 74 76-162 81-161 (1956)
175 PF08016 PKD_channel: Polycyst 90.3 5.4 0.00012 44.2 14.3 18 144-161 236-254 (425)
176 KOG3599 Ca2+-modulated nonsele 90.3 12 0.00027 44.2 17.5 38 283-320 637-677 (798)
177 PF00520 Ion_trans: Ion transp 87.7 4.5 9.8E-05 39.0 10.3 59 175-233 65-124 (200)
178 PLN03223 Polycystin cation cha 87.3 27 0.00057 43.0 17.3 17 145-161 1208-1225(1634)
179 PF11929 DUF3447: Domain of un 82.7 2.3 4.9E-05 33.9 4.4 46 542-594 9-54 (76)
180 cd06537 CIDE_N_B CIDE_N domain 81.1 4.6 9.9E-05 32.1 5.3 50 770-819 18-71 (81)
181 PF00060 Lig_chan: Ligand-gate 81.0 2.3 4.9E-05 39.0 4.5 57 263-320 42-98 (148)
182 PF11929 DUF3447: Domain of un 79.5 2.7 6E-05 33.5 3.9 47 638-691 8-54 (76)
183 KOG4440 NMDA selective glutama 78.7 5.1 0.00011 44.2 6.6 93 215-319 575-667 (993)
184 KOG1053 Glutamate-gated NMDA-t 78.2 37 0.0008 39.7 13.2 47 270-318 616-662 (1258)
185 COG4709 Predicted membrane pro 78.1 13 0.00029 34.8 8.1 74 329-404 5-84 (195)
186 cd01615 CIDE_N CIDE_N domain, 76.6 6.6 0.00014 31.2 5.0 49 771-819 19-72 (78)
187 KOG3713 Voltage-gated K+ chann 74.9 12 0.00026 40.7 8.1 20 104-123 274-293 (477)
188 cd06539 CIDE_N_A CIDE_N domain 74.3 8.6 0.00019 30.4 5.0 49 771-819 19-72 (78)
189 PF08006 DUF1700: Protein of u 69.2 23 0.0005 33.8 8.1 55 328-384 4-64 (181)
190 PF07883 Cupin_2: Cupin domain 69.0 10 0.00022 29.4 4.7 67 413-488 3-70 (71)
191 smart00266 CAD Domains present 66.6 15 0.00033 28.8 4.9 49 771-819 17-70 (74)
192 KOG1545 Voltage-gated shaker-l 66.0 12 0.00026 38.6 5.4 49 177-226 325-373 (507)
193 cd06535 CIDE_N_CAD CIDE_N doma 63.5 17 0.00037 28.7 4.7 49 771-819 19-71 (77)
194 cd06538 CIDE_N_FSP27 CIDE_N do 63.5 19 0.0004 28.7 4.9 49 771-819 19-71 (79)
195 cd06536 CIDE_N_ICAD CIDE_N dom 61.8 20 0.00044 28.6 4.9 49 771-819 19-74 (80)
196 KOG0513 Ca2+-independent phosp 61.3 2 4.4E-05 47.6 -1.0 174 532-733 48-224 (503)
197 smart00835 Cupin_1 Cupin. This 59.7 22 0.00047 32.5 5.8 79 410-491 32-111 (146)
198 PF02017 CIDE-N: CIDE-N domain 55.2 16 0.00034 29.1 3.3 49 771-819 19-72 (78)
199 PF03607 DCX: Doublecortin; I 55.0 15 0.00033 27.6 3.2 47 773-820 9-56 (60)
200 PF14377 DUF4414: Domain of un 54.5 26 0.00056 30.2 4.9 42 342-383 52-105 (108)
201 PLN03081 pentatricopeptide (PP 52.3 3E+02 0.0066 32.7 15.3 169 540-718 263-445 (697)
202 KOG1052 Glutamate-gated kainat 52.2 45 0.00097 39.4 8.2 53 267-320 383-435 (656)
203 PLN03218 maturation of RBCL 1; 52.2 1.1E+02 0.0025 38.1 11.7 87 628-718 609-703 (1060)
204 PF13314 DUF4083: Domain of un 50.1 1E+02 0.0022 22.8 6.6 15 326-340 43-57 (58)
205 PLN03081 pentatricopeptide (PP 49.7 2.8E+02 0.0061 33.0 14.5 13 678-690 506-518 (697)
206 KOG0513 Ca2+-independent phosp 47.7 4.7 0.0001 44.8 -0.9 133 566-715 49-182 (503)
207 PHA01757 hypothetical protein 47.3 87 0.0019 24.6 6.0 47 289-335 4-50 (98)
208 KOG2378 cAMP-regulated guanine 46.4 19 0.00041 38.5 3.2 44 458-501 1-45 (573)
209 PLN03218 maturation of RBCL 1; 45.4 1.6E+02 0.0035 36.8 11.5 25 627-651 748-772 (1060)
210 PF06212 GRIM-19: GRIM-19 prot 45.3 90 0.0019 27.8 6.8 38 336-373 64-101 (130)
211 KOG1054 Glutamate-gated AMPA-t 42.0 24 0.00051 39.1 3.3 52 266-318 596-647 (897)
212 PRK13290 ectC L-ectoine syntha 42.0 65 0.0014 28.6 5.5 68 411-488 38-106 (125)
213 PF08285 DPM3: Dolichol-phosph 41.0 2.1E+02 0.0045 23.7 9.0 42 303-344 45-90 (91)
214 PF08016 PKD_channel: Polycyst 36.0 6.3E+02 0.014 27.8 14.3 20 103-122 242-261 (425)
215 PF04053 Coatomer_WDAD: Coatom 34.4 85 0.0018 34.8 6.2 21 671-691 407-428 (443)
216 TIGR00933 2a38 potassium uptak 31.0 3.9E+02 0.0085 29.1 10.7 47 265-311 128-180 (390)
217 KOG0292 Vesicle coat complex C 30.3 81 0.0018 37.1 5.2 220 472-733 566-787 (1202)
218 PF05899 Cupin_3: Protein of u 30.2 84 0.0018 24.8 4.0 30 429-463 26-55 (74)
219 COG0662 {ManC} Mannose-6-phosp 28.6 96 0.0021 27.5 4.5 47 409-461 37-84 (127)
220 KOG1709 Guanidinoacetate methy 28.1 46 0.001 32.2 2.4 39 656-694 2-40 (271)
221 PF10011 DUF2254: Predicted me 28.0 2.5E+02 0.0053 30.4 8.4 56 263-318 98-153 (371)
222 KOG4390 Voltage-gated A-type K 27.7 30 0.00065 36.0 1.2 17 309-325 404-420 (632)
223 PF02037 SAP: SAP domain; Int 27.6 1.4E+02 0.0031 19.5 4.0 26 330-355 5-35 (35)
224 PF14377 DUF4414: Domain of un 26.9 1.2E+02 0.0026 26.0 4.7 46 342-387 8-68 (108)
225 TIGR00934 2a38euk potassium up 26.8 3.7E+02 0.0081 32.0 9.7 93 205-314 447-546 (800)
226 PLN03077 Protein ECB2; Provisi 26.4 6E+02 0.013 31.1 12.5 113 541-658 328-449 (857)
227 KOG0500 Cyclic nucleotide-gate 26.2 9.4E+02 0.02 26.8 14.3 56 348-415 249-309 (536)
228 COG3718 IolB Uncharacterized e 26.1 2.1E+02 0.0045 28.1 6.3 67 410-490 31-110 (270)
229 PF08475 Baculo_VP91_N: Viral 24.6 1.2E+02 0.0027 28.6 4.5 37 311-347 12-52 (183)
230 PRK09108 type III secretion sy 24.4 8.4E+02 0.018 26.2 11.3 61 293-353 180-241 (353)
231 PRK08156 type III secretion sy 23.6 7.4E+02 0.016 26.6 10.7 22 332-353 213-234 (361)
232 COG1917 Uncharacterized conser 23.2 1.3E+02 0.0027 26.8 4.4 50 410-465 45-95 (131)
233 TIGR03404 bicupin_oxalic bicup 22.8 1.4E+02 0.003 32.3 5.2 52 411-463 70-121 (367)
234 TIGR03404 bicupin_oxalic bicup 22.7 1.4E+02 0.0029 32.3 5.1 51 410-461 247-298 (367)
235 PRK13109 flhB flagellar biosyn 22.7 9.1E+02 0.02 25.9 11.2 57 297-353 191-248 (358)
236 TIGR00328 flhB flagellar biosy 22.6 7.9E+02 0.017 26.3 10.7 23 331-353 217-239 (347)
237 PRK04190 glucose-6-phosphate i 22.5 2.2E+02 0.0047 27.5 5.9 50 412-462 72-130 (191)
238 KOG3300 NADH:ubiquinone oxidor 22.5 2.7E+02 0.0059 24.5 5.7 42 333-374 64-106 (146)
239 PRK13264 3-hydroxyanthranilate 22.2 1.4E+02 0.003 28.2 4.3 60 426-492 52-111 (177)
240 PLN03077 Protein ECB2; Provisi 21.9 1.4E+03 0.029 28.0 14.4 89 623-717 514-607 (857)
241 PF00190 Cupin_1: Cupin; Inte 21.9 1E+02 0.0022 27.9 3.6 52 412-463 38-95 (144)
242 PRK12468 flhB flagellar biosyn 21.1 8.2E+02 0.018 26.6 10.6 23 331-353 224-246 (386)
243 TIGR00769 AAA ADP/ATP carrier 21.0 1.2E+03 0.026 26.2 16.4 51 214-300 121-172 (472)
244 PRK12721 secretion system appa 21.0 8.7E+02 0.019 26.0 10.6 60 294-353 179-239 (349)
245 PF11151 DUF2929: Protein of u 20.8 75 0.0016 23.7 1.9 18 265-282 2-19 (57)
246 PRK05702 flhB flagellar biosyn 20.8 8.9E+02 0.019 26.0 10.7 22 332-353 225-246 (359)
247 COG1226 Kch Kef-type K+ transp 20.6 57 0.0012 31.3 1.7 36 266-301 118-153 (212)
248 KOG3836 HLH transcription fact 20.5 27 0.00059 39.1 -0.7 56 546-601 403-458 (605)
249 PRK02463 OxaA-like protein pre 20.3 1E+03 0.022 25.0 13.4 18 209-226 8-25 (307)
No 1
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=100.00 E-value=6.9e-115 Score=1026.67 Aligned_cols=751 Identities=32% Similarity=0.554 Sum_probs=654.4
Q ss_pred CCcCeEEcCCChhHHHHHHHHHHHHHHHhhhcceeeeeecCC-CcCeehhHHHHHHHHHHhHhheeeEEEEeCCceEEee
Q 003425 60 FSRNLVFHPDNRWYRAWTKFILIWAVYSSIFTPVEFGFFRGL-SKNLYVLDIVGQIAFLFDIVLQFCLAYRDSQTYRLIC 138 (821)
Q Consensus 60 ~~~~~~~~P~s~~~~~w~~~~~~~~~~~~~~~p~~~~f~~~~-~~~~~~~~~~~~~~f~~Di~l~f~t~y~~~~~~~~v~ 138 (821)
+.+.++|+|+++++++|+.+++++++|+++++|+.++|.... ...+.++|++++++|++||+++|+|+|++++++.+|.
T Consensus 48 ~~~~~ii~P~~~~~~~Wd~~~~~~~~y~~~~~p~~~~F~~~~~~~~~~~~d~i~~~~F~iDi~l~f~~ay~d~~~~~lV~ 127 (823)
T PLN03192 48 GSDGWIISPMDSRYRWWETLMVVLVAYSAWVYPFEVAFLNASPKRGLEIADNVVDLFFAVDIVLTFFVAYIDPRTQLLVR 127 (823)
T ss_pred ccCCeEECCCCcHHHHHHHHHHHHHHHHHHHHHHHHHeeCCCCCCCeeeHHHHHHHHHHHHHHhheeEEEEeCCCcEEEe
Confidence 355789999999999999999999999999999999996543 3458899999999999999999999999999989999
Q ss_pred ccHHHHHHHhhhhhHHHHHhhhhHHHHHhhcC----chhHHHHHHHHHHHHHHHHHHHHHhhhhhHhhhHHHHHHHHHHH
Q 003425 139 KRTPIALRYLRSSFIIDLFSCMPWDLIYKASG----RKEAVRYLLWIRLYRVRKVSQFFHKMEKDIRINYMFSRIVKLIA 214 (821)
Q Consensus 139 ~~~~I~~~Ylk~~f~iDlis~lP~~~~~~~~~----~~~~~~~l~llrl~rl~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (821)
||++|+++|+|+||++|++|++|++++..... ....+++++++|++|+.|+.+++.++++..+.++...+++++++
T Consensus 128 d~~~I~~~Yl~~~f~~Dlis~lP~~~i~~~~~~~~~~~~~~~~l~llrl~Rl~ri~~~~~~le~~~~~~~~~~~~~kli~ 207 (823)
T PLN03192 128 DRKKIAVRYLSTWFLMDVASTIPFQALAYLITGTVKLNLSYSLLGLLRFWRLRRVKQLFTRLEKDIRFSYFWIRCARLLS 207 (823)
T ss_pred CHHHHHHHHHHHhHHHHHHHHhHHHHHHHHhcCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 99999999999999999999999987643321 22356788889999999999999999888888777789999999
Q ss_pred HHHHHHHHHHHHHHHHHccCCCCCCCCceeccccCCCCCcccccccchHHHHHHHHHHHHHHhhccccCccccCChhHHH
Q 003425 215 VELYCSHIAACIFYYLATTLPPEQEGYTWIGSLKMGDYSYADFREIGFWKSYITSMYASVVTMTTVGYGDVHAVNLREMV 294 (821)
Q Consensus 215 ~~l~~~h~~ac~~~~i~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~Y~~s~yw~~~t~tTvGyGdi~p~t~~e~~ 294 (821)
.+++++||+||+||+++...+. .+.+|+... +.++.+.+++.+|+.|+||+++|||||||||++|.|..|++
T Consensus 208 ~~l~~~H~~aC~~y~i~~~~~~--~~~~Wi~~~------~~~~~~~s~~~~Yi~slYwai~TmtTVGYGDi~p~t~~E~i 279 (823)
T PLN03192 208 VTLFLVHCAGCLYYLIADRYPH--QGKTWIGAV------IPNFRETSLWIRYISAIYWSITTMTTVGYGDLHAVNTIEMI 279 (823)
T ss_pred HHHHHHHHHHHHHHHHHhhcCC--CCCchHHHh------hhccccCcHHHHHHHHHHHHHHHHhhccCCCcCCCccchHH
Confidence 9999999999999999864332 345888641 23455678899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc-CchhHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhhc-cccHHHHHhhC
Q 003425 295 FIMIYVSFDMILGAYLIGNMTALIVK-GSKTEKFRDKMTDLMKYINRNRLGRDIRDQIIGHLRLQYES-SYTEASVLQDI 372 (821)
Q Consensus 295 ~~~~~~i~g~~~~a~~i~~i~~~~~~-~~~~~~~~~~~~~~~~~m~~~~lp~~l~~ri~~y~~~~~~~-~~~~~~~l~~l 372 (821)
+++++|++|++++||++|++++++.+ ..+..+|+++++.+++||+++++|+.||+||++|++++|+. +.++++++++|
T Consensus 280 ~~i~~ml~g~~~~a~~ig~i~~li~~~~~~~~~f~~~~~~~~~ym~~~~lp~~lq~ri~~y~~~~~~~~~~~~~~~l~~L 359 (823)
T PLN03192 280 FIIFYMLFNLGLTAYLIGNMTNLVVEGTRRTMEFRNSIEAASNFVGRNRLPPRLKDQILAYMCLRFKAESLNQQQLIDQL 359 (823)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhccccHHHHHHHc
Confidence 99999999999999999999999988 66778999999999999999999999999999999999975 57889999999
Q ss_pred cHHHHHHHHHhhhhhhccccccccCCCHHHHHHHHHhcccccccccCeEEccCCccCeEEEEEeeEEEEEeeccCCccce
Q 003425 373 PISIRAKISQTLYLPYIEKVPLFKGCSSEFINQIVIRLHEEFFLPGEVIMEKGNVVDQLYFVCLGKLEEVGIEENGTEDY 452 (821)
Q Consensus 373 p~~L~~~i~~~~~~~~l~~~~~f~~~~~~~l~~l~~~~~~~~~~~~e~I~~~g~~~~~ly~I~~G~v~~~~~~~~g~~~~ 452 (821)
|++||.++..+++.+.++++++|++++++++.+|+..++.+.|+|||.|+.+||.++++|||.+|.|+++. ..++++.+
T Consensus 360 p~~Lr~~i~~~l~~~~l~~~~lF~~~s~~~l~~L~~~~~~~~~~pge~I~~qge~~~~lY~I~~G~V~i~~-~~~~~e~~ 438 (823)
T PLN03192 360 PKSICKSICQHLFLPVVEKVYLFKGVSREILLLLVTKMKAEYIPPREDVIMQNEAPDDVYIVVSGEVEIID-SEGEKERV 438 (823)
T ss_pred CHHHHHHHHHHHHHHHHhhCcchhcCCHHHHHHHHHhhheeeeCCCCEEEECCCCCceEEEEEecEEEEEE-ecCCccee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999985 55678888
Q ss_pred EEEeCCCCccccccccccCCcceEEEEecceEEEEechHhHHHHHHHhhhchHHHHHHHhcCCcchh--hhhhhcccccc
Q 003425 453 VSYLHPNSSFGEVSILCNIPQPYTVQVCELCRLLRIDKQSFTNIIDIYFCDGRKVLTNLLQGKESDL--RLKQLQSDITF 530 (821)
Q Consensus 453 i~~l~~G~~fGe~~~~~~~~~~~~~~a~~~~~~~~i~~~~f~~~l~~~p~~~~~~l~~~l~~~~~~~--~~~~l~~~~~~ 530 (821)
+..+++|++|||.+++.+.|++++++|.++|++++|++++|.++++.+|+++..++++++++..... ....+-.+.
T Consensus 439 l~~l~~Gd~FGE~~~l~~~p~~~t~ra~~~s~ll~l~~~~f~~ll~~~p~d~~~i~~~~l~~~~~l~~l~v~~ll~~~-- 516 (823)
T PLN03192 439 VGTLGCGDIFGEVGALCCRPQSFTFRTKTLSQLLRLKTSTLIEAMQTRQEDNVVILKNFLQHHKELHDLNVGDLLGDN-- 516 (823)
T ss_pred eEEccCCCEecchHHhcCCCCCCeEEEcccEEEEEEEHHHHHHHHHHhhHHHHHHHHHHHHHhhhhccccHHHHHhhc--
Confidence 9999999999999999999999999999999999999999999999999999999999887532211 111110111
Q ss_pred cccchhhhHhhhHHHHhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHH
Q 003425 531 HISKHEAELALKVNSAAYHGDLYQLEGLIRAGADPNRTDYDGRSPLHLAASRGYEEIMTFLIQKGVDINLKDNFGNTPLL 610 (821)
Q Consensus 531 ~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~tpL~ 610 (821)
.....+.++.++||.||..|+.++++.|++.|+|+|..|.+|.||||+||..|+.+++++|+++|+++|.+|.+|.||||
T Consensus 517 ~~~~~~~~~~~~L~~Aa~~g~~~~l~~Ll~~G~d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadin~~d~~G~TpL~ 596 (823)
T PLN03192 517 GGEHDDPNMASNLLTVASTGNAALLEELLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALW 596 (823)
T ss_pred ccccCCccchhHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHhcCCCCCCcCCCCCCHHH
Confidence 11234556789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCChHHHHHHHhcCCCCCcccccchhhHHHhcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHH
Q 003425 611 EAIKYGNDGAASLLVKEGASLNVEEAGSFLCTAVARGDSDLLKRVLSNGIDPNTRDYDLRTPLHVAASEGLYLMAKLLVE 690 (821)
Q Consensus 611 ~A~~~~~~~~v~~Ll~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~ 690 (821)
+|+..|+.+++++|++.++..+..++.++||.|+.+|+.++++.|+++|+|+|.+|.+|+||||+|+..|+.+++++|++
T Consensus 597 ~A~~~g~~~iv~~L~~~~~~~~~~~~~~~L~~Aa~~g~~~~v~~Ll~~Gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~ 676 (823)
T PLN03192 597 NAISAKHHKIFRILYHFASISDPHAAGDLLCTAAKRNDLTAMKELLKQGLNVDSEDHQGATALQVAMAEDHVDMVRLLIM 676 (823)
T ss_pred HHHHhCCHHHHHHHHhcCcccCcccCchHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHHHHHHHH
Confidence 99999999999999999988888889999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCC-CCHHHHHHHcCCHHHHHHH--Hhccccccc--cC-----CCCCCccccccCCCCcccccCCCCCCcc
Q 003425 691 AGASVFPKDRWG-NTPLDEGRMCGNKNLIKLL--EDAKSTQLL--EF-----PHGFQDTADKRNPTRKCTVFPFHPWDAK 760 (821)
Q Consensus 691 ~ga~~~~~d~~g-~t~l~~A~~~~~~~i~~~L--l~~~a~~~~--~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 760 (821)
+|||++..|..| .||++++......+...-+ .+..+.... .. +..............+.++.+.||..++
T Consensus 677 ~GAdv~~~~~~g~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 756 (823)
T PLN03192 677 NGADVDKANTDDDFSPTELRELLQKRELGHSITIVDSVPADEPDLGRDGGSRPGRLQGTSSDNQCRPRVSIYKGHPLLRN 756 (823)
T ss_pred cCCCCCCCCCCCCCCHHHHHHHHHHhhhCceeeeccCCCccccccccccccccccccccccccccCceEEEecCCCcccc
Confidence 999999999888 9999988665443321111 111110000 00 0011111122233456788899998776
Q ss_pred c--cccCceEEEcCccHHHHHHHHHhHcCCCCCc-ccccCCCceeeeeeeeecCCeEEEeecCC
Q 003425 761 E--SRRHGIVLWIPQNIKDLIKTAAEQLDFRGGD-CILSSEGGKILDVDMINDDQKLYLIQETH 821 (821)
Q Consensus 761 ~--~~~~~~~~~lp~~~~~l~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~r~~~~~~~~~~~~ 821 (821)
+ .+..|.+.++|++++|+.+.+++++|++... .+.++||++|++++|+|||||||+|+++|
T Consensus 757 ~~~~~~~g~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 820 (823)
T PLN03192 757 ERCCNEAGKLINLPPSLEELKAIAGEKLGFDARKAMVTNEEGAEIDSIEVIRDNDKLFVVEDED 820 (823)
T ss_pred cccccccCeEEeCCccHHHHHHHHHHHhCCCcccceeecCCCceeeeeEEEecCCEEEEeeccc
Confidence 6 5689999999999999999999999987763 46789999999999999999999999986
No 2
>KOG0498 consensus K+-channel ERG and related proteins, contain PAS/PAC sensor domain [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=2e-83 Score=704.01 Aligned_cols=542 Identities=35% Similarity=0.573 Sum_probs=454.3
Q ss_pred CcCeEEcCCChhHHHHHHHHHHHHHHHhhhcceeeeeecC----------CCcCeehhHHHHHHHHHHhHhheeeEEEEe
Q 003425 61 SRNLVFHPDNRWYRAWTKFILIWAVYSSIFTPVEFGFFRG----------LSKNLYVLDIVGQIAFLFDIVLQFCLAYRD 130 (821)
Q Consensus 61 ~~~~~~~P~s~~~~~w~~~~~~~~~~~~~~~p~~~~f~~~----------~~~~~~~~~~~~~~~f~~Di~l~f~t~y~~ 130 (821)
...++++|+|+++..|+.+++++++|++++.|++++|... ....+.++|.++|++|++||+++|+|+|.+
T Consensus 65 ~~~~Ii~P~s~~~~~W~~~~Ll~~iya~~v~P~~f~f~~~~~~~~~~d~~~~~~l~v~d~ivD~fflvdIvL~Frtayv~ 144 (727)
T KOG0498|consen 65 SRKWILDPYSPFYRVWNKFFLLLVIYAAFVDPLFFYFLLIDDERKCIDGKLAAPLTVLDTIVDIFFLVDIVLNFRTAYVD 144 (727)
T ss_pred ccceeECCCChHHHHHHHHHHHHHHHHHHhccceeeEEecccccccccccccCceeeHHHHHHHHHHHHHHHhheEEEEC
Confidence 3455999999999999999999999999999999999765 557799999999999999999999999999
Q ss_pred CCceEEeeccHHHHHHHhhhhhHHHHHhhhhHHHHHhhcC---------chhHHHHHHHHHHHHHHHHHHHHHhhhhhHh
Q 003425 131 SQTYRLICKRTPIALRYLRSSFIIDLFSCMPWDLIYKASG---------RKEAVRYLLWIRLYRVRKVSQFFHKMEKDIR 201 (821)
Q Consensus 131 ~~~~~~v~~~~~I~~~Ylk~~f~iDlis~lP~~~~~~~~~---------~~~~~~~l~llrl~rl~r~~~~~~~~~~~~~ 201 (821)
+.+.++|.||++||+||+++||+||++|++|++.++.... ......++.+.||+|+.|+.+++.++++...
T Consensus 145 ~~s~elV~dpk~IA~rYl~twFiiDlis~lP~~~i~~~~~~~~~~~~~~~~~l~~il~~~rL~Rl~Rv~~l~~r~~k~~~ 224 (727)
T KOG0498|consen 145 PSSYELVDDPKKIAKRYLKTWFLIDLISTLPFDQIVVLVVIGSTSLALESTILVGILLLQRLPRLRRVIPLFARLEKDTG 224 (727)
T ss_pred CCCceeeeCHHHHHHHHHhhhHHHHHHHhcChhhheeeeeecccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9997899999999999999999999999999998876432 2246678888899999999999999998777
Q ss_pred hhH--HHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCC-ceeccccCCCCCccc----ccccchHHHHHHHHHHHH
Q 003425 202 INY--MFSRIVKLIAVELYCSHIAACIFYYLATTLPPEQEGY-TWIGSLKMGDYSYAD----FREIGFWKSYITSMYASV 274 (821)
Q Consensus 202 ~~~--~~~~~~~~~~~~l~~~h~~ac~~~~i~~~~~~~~~~~-~w~~~~~~~~~~~~~----~~~~~~~~~Y~~s~yw~~ 274 (821)
+.+ ++.-+.++++.+++++||+||+||+++...+...... +|+..... .....+ +...+++.+|++|+||++
T Consensus 225 ~v~~~awa~~a~ll~~~~l~sH~~gc~wYlia~~~~~~~~~~~tw~~~l~~-~~~~~~~~~~fg~~s~~~kY~~aLyw~l 303 (727)
T KOG0498|consen 225 FVYETAWAGAALLLSVYLLASHWAGCIWYLIAIERPASCPRKATWLGSLGR-LLSCYNLSFTFGIYSLALKYVYALYWGL 303 (727)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCcccccccccccc-ccccCcccccccchhHHHHHHHHHHHHh
Confidence 655 3334779999999999999999999998766555555 88875432 222222 566788889999999999
Q ss_pred HHhhccccCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CchhHHHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 003425 275 VTMTTVGYGDVHAVNLREMVFIMIYVSFDMILGAYLIGNMTALIVK-GSKTEKFRDKMTDLMKYINRNRLGRDIRDQIIG 353 (821)
Q Consensus 275 ~t~tTvGyGdi~p~t~~e~~~~~~~~i~g~~~~a~~i~~i~~~~~~-~~~~~~~~~~~~~~~~~m~~~~lp~~l~~ri~~ 353 (821)
+||||||||+.+|++..|++|+|++|++|.++||++||||+++++. .++.++|+.|++++++||++++||++||+||++
T Consensus 304 ~tLstvG~g~~~s~~~~E~iFsi~~mi~GllL~A~lIGNmt~~iqs~tsR~~~~r~k~rd~e~~m~~~~LP~~LRqRi~~ 383 (727)
T KOG0498|consen 304 STLSTVGYGLVHANNMGEKIFSIFIMLFGLLLFAYLIGNMTALLQSLTSRTEEMRDKMRDAEQWMSRRQLPPDLRQRIRR 383 (727)
T ss_pred hHhhhccCCccCCCCcHHHHHHHHHHHHhHHHHHHHHhhHHHhHHHHhHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999988 888999999999999999999999999999999
Q ss_pred HHHHHhhc--cccHHHHHhhCcHHHHHHHHHhhhhhhccccccccCCCHHHHHHHHHhcccccccccCeEEccCCccCeE
Q 003425 354 HLRLQYES--SYTEASVLQDIPISIRAKISQTLYLPYIEKVPLFKGCSSEFINQIVIRLHEEFFLPGEVIMEKGNVVDQL 431 (821)
Q Consensus 354 y~~~~~~~--~~~~~~~l~~lp~~L~~~i~~~~~~~~l~~~~~f~~~~~~~l~~l~~~~~~~~~~~~e~I~~~g~~~~~l 431 (821)
|++|+|.. +.+|++++++||+.||++|++++|.++++++|+|++++++++.+|+.+++...|+|||+|++|||+.++|
T Consensus 384 y~q~kw~~t~Gvdee~lL~~LP~~LR~dI~~hL~~~lv~~vpLF~~md~~~L~al~~rlk~~~f~pge~iireGd~v~~m 463 (727)
T KOG0498|consen 384 YEQYKWLATRGVDEEELLQSLPKDLRRDIKRHLCLDLVRKVPLFAGMDDGLLDALCSRLKPEYFTPGEYIIREGDPVTDM 463 (727)
T ss_pred HHHHHHhhccCcCHHHHHHhCCHHHHHHHHHHHhHHHHhhCchhhcCCHHHHHHHHHHhhhhccCCCCeEEecCCcccee
Confidence 99999965 8999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeeEEEEEeeccCCccceEEEeCCCCccc-ccccccc-CCcceEEEEecceEEEEechHhHHHHHHHhhhchHHHHH
Q 003425 432 YFVCLGKLEEVGIEENGTEDYVSYLHPNSSFG-EVSILCN-IPQPYTVQVCELCRLLRIDKQSFTNIIDIYFCDGRKVLT 509 (821)
Q Consensus 432 y~I~~G~v~~~~~~~~g~~~~i~~l~~G~~fG-e~~~~~~-~~~~~~~~a~~~~~~~~i~~~~f~~~l~~~p~~~~~~l~ 509 (821)
|||++|.+++...+ +|.+.....+++||+|| |+..... .|++.||+|.+.|++++|++++|..+++.+|.++..+++
T Consensus 464 yFI~rG~le~~~~~-~g~~~~~~~L~~Gd~~GeEl~~~~~~~p~t~TVralt~~el~~L~~~dL~~V~~~f~~~~~~~l~ 542 (727)
T KOG0498|consen 464 YFIVRGSLESITTD-GGGFFVVAILGPGDFFGEELLTWCLDLPQTRTVRALTYCELFRLSADDLKEVLQQFRRLGSKFLQ 542 (727)
T ss_pred EEEEeeeEEEEEcc-CCceEEEEEecCCCccchHHHHHHhcCCCCceeehhhhhhHHhccHHHHHHHHHHhHHHHHHHHH
Confidence 99999999988744 45667889999999999 8887777 889999999999999999999999999999999999999
Q ss_pred H---HhcCCcchhhhhhhcccccccccchhhhHhhh--HHHHhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCC
Q 003425 510 N---LLQGKESDLRLKQLQSDITFHISKHEAELALK--VNSAAYHGDLYQLEGLIRAGADPNRTDYDGRSPLHLAASRGY 584 (821)
Q Consensus 510 ~---~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--L~~A~~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~g~ 584 (821)
+ .+..+...-.....+..-.-+...+ .....+ ...++..|+..-.+..+..+..++..+.+|.+++|.++..|.
T Consensus 543 ~~~r~~s~~~r~~aa~~iq~a~r~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~ 621 (727)
T KOG0498|consen 543 HTFRYYSHLWRTWAACFIQAAWRRHIKRK-GEEELALEEEESAIRGDDRGSKSLLRAGILASRFAANGRPPLHTAASRGS 621 (727)
T ss_pred hHHHHhhhhhhhhhhhhHHHHHHHHHHhh-ccchhhhhcchhhhccccccchhhhhcccccccccccCCCccccccccCc
Confidence 5 3333222111111111000000000 000011 112233333334455666777778888888888888888888
Q ss_pred HHHHHHHHHcCCCCCCCCCCC
Q 003425 585 EEIMTFLIQKGVDINLKDNFG 605 (821)
Q Consensus 585 ~~~v~~Ll~~g~~~~~~~~~g 605 (821)
..+...+++++++++..+..+
T Consensus 622 ~~~~~~~~~~~~~p~f~~~~~ 642 (727)
T KOG0498|consen 622 SDCALLLLQKPADPDFSDAEG 642 (727)
T ss_pred cccccccCCCCCCCCcccccc
Confidence 888888888888888777655
No 3
>KOG0500 consensus Cyclic nucleotide-gated cation channel CNGA1-3 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=6.1e-64 Score=506.10 Aligned_cols=417 Identities=23% Similarity=0.432 Sum_probs=366.4
Q ss_pred HHHHHHHhhhcceeeeeecCC---CcCeehhHHHHHHHHHHhHhheeeEEEEeCCceEEeeccHHHHHHHhhh-hhHHHH
Q 003425 81 LIWAVYSSIFTPVEFGFFRGL---SKNLYVLDIVGQIAFLFDIVLQFCLAYRDSQTYRLICKRTPIALRYLRS-SFIIDL 156 (821)
Q Consensus 81 ~~~~~~~~~~~p~~~~f~~~~---~~~~~~~~~~~~~~f~~Di~l~f~t~y~~~~~~~~v~~~~~I~~~Ylk~-~f~iDl 156 (821)
.+.++|+.++++.+.+|.+-. ...|..+|+++|++|++|++++++|+|+++| .+|.+-.+..+||+.+ .|.+|+
T Consensus 4 s~~vLYN~~~li~r~~F~di~~~y~~~wl~ld~~~D~vyllDi~v~~R~gyleqG--llV~~~~Kl~~hY~~s~~f~lD~ 81 (536)
T KOG0500|consen 4 SLGVLYNMIVLIVRAAFDDIQSSYLENWLPLDYLFDFVYLLDIIVRSRTGYLEQG--LLVKDTSKLRKHYVHSTQFKLDV 81 (536)
T ss_pred EEehHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhcC--eeehhhHHHHHHHHHhhhhhhhh
Confidence 456788888888877886532 3458899999999999999999999999999 5999999999999988 789999
Q ss_pred HhhhhHHHHHhhcCchhHHHHHHHHHHHHHHHHHHHHHhhhhhHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCC
Q 003425 157 FSCMPWDLIYKASGRKEAVRYLLWIRLYRVRKVSQFFHKMEKDIRINYMFSRIVKLIAVELYCSHIAACIFYYLATTLPP 236 (821)
Q Consensus 157 is~lP~~~~~~~~~~~~~~~~l~llrl~rl~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~h~~ac~~~~i~~~~~~ 236 (821)
+|++|+++++...+.....| ++|++|+.|+..++.+.+........+ ++.+++.++++++||.||+||+++.....
T Consensus 82 l~liP~D~l~~~~~~~~~~r---~nRllk~yRl~~F~~rTetrT~~Pn~f-ri~~lv~~~~ilfHWNaClYf~iS~~~g~ 157 (536)
T KOG0500|consen 82 LSLIPLDLLLFKDGSASLER---LNRLLKIYRLFEFFDRTETRTTYPNAF-RISKLVHYCLILFHWNACLYFLISKAIGF 157 (536)
T ss_pred hhhcchhHHhhcCCcchHHH---HHHHHHHHHHHHHHHHhccccCCchHH-HHHHHHHHHHHHHHHhhHHHHhhhHhcCc
Confidence 99999999987776655544 667777777778887777666554444 89999999999999999999999976555
Q ss_pred CCCCCceeccccCCCCCcccccccchHHHHHHHHHHHHHHhhccccCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003425 237 EQEGYTWIGSLKMGDYSYADFREIGFWKSYITSMYASVVTMTTVGYGDVHAVNLREMVFIMIYVSFDMILGAYLIGNMTA 316 (821)
Q Consensus 237 ~~~~~~w~~~~~~~~~~~~~~~~~~~~~~Y~~s~yw~~~t~tTvGyGdi~p~t~~e~~~~~~~~i~g~~~~a~~i~~i~~ 316 (821)
..+ +|.... ..+..++.+...++..+|+.|+||+..||||+| --..|.+..|++|.++-.++|+++||.++|++++
T Consensus 158 ~~d--~wvY~~-i~d~~~~~c~~~n~~ReY~~S~YWStLTlTTiG-e~P~P~t~~ey~F~I~d~LiGvliFAtIvG~VGs 233 (536)
T KOG0500|consen 158 TTD--DWVYPK-INDPEFATCDAGNLTREYLYSLYWSTLTLTTIG-EQPPPVTSSEYAFVIVDTLIGVLIFATIVGNVGS 233 (536)
T ss_pred ccc--ccccCC-ccCccccccchhHHHHHHHHHHHHHhhhhhhcc-CCCCCCcCchhhHHHHHHHHHHHHHhhhhccHhH
Confidence 444 366542 333444555556689999999999999999999 5788999999999999999999999999999999
Q ss_pred HHhc-CchhHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhhcc--ccHHHHHhhCcHHHHHHHHHhhhhhhccccc
Q 003425 317 LIVK-GSKTEKFRDKMTDLMKYINRNRLGRDIRDQIIGHLRLQYESS--YTEASVLQDIPISIRAKISQTLYLPYIEKVP 393 (821)
Q Consensus 317 ~~~~-~~~~~~~~~~~~~~~~~m~~~~lp~~l~~ri~~y~~~~~~~~--~~~~~~l~~lp~~L~~~i~~~~~~~~l~~~~ 393 (821)
++++ +....+||.+|+.+++||+.+++|..+|.||.+|+.|.|.++ .+|+++++.||+.|+.+|+.+++.+.|++++
T Consensus 234 mVtnmna~r~EFq~~mDGiK~YM~~RkV~~~lq~rVikwfdYlwa~~~~~DEeevl~~LP~kL~aeIA~nvh~dTLkkV~ 313 (536)
T KOG0500|consen 234 MVTNMNAARTEFQAKMDGIKQYMRYRKVPKALQTRVIKWFDYLWAHKKIVDEEEVLKLLPDKLKAEIAINVHLDTLKKVR 313 (536)
T ss_pred HHHhhhHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHhccccccHHHHHHhCCHHHHhHhHHHHHHHHHHhhh
Confidence 9999 667789999999999999999999999999999999999654 6899999999999999999999999999999
Q ss_pred cccCCCHHHHHHHHHhcccccccccCeEEccCCccCeEEEEEeeEEEEEeeccCCccceEEEeCCCCccccccccc----
Q 003425 394 LFKGCSSEFINQIVIRLHEEFFLPGEVIMEKGNVVDQLYFVCLGKLEEVGIEENGTEDYVSYLHPNSSFGEVSILC---- 469 (821)
Q Consensus 394 ~f~~~~~~~l~~l~~~~~~~~~~~~e~I~~~g~~~~~ly~I~~G~v~~~~~~~~g~~~~i~~l~~G~~fGe~~~~~---- 469 (821)
+|+++.+.++.+|+..++++.|.|||+|+++||.+.+||+|.+|.+++.. ++|. .+...+++|++|||++++.
T Consensus 314 iF~~ce~~lL~elVLklk~qvfSPgDyICrKGdvgkEMyIVk~G~L~Vv~--dDg~-t~~~~L~~G~~FGEisIlni~g~ 390 (536)
T KOG0500|consen 314 IFQDCEAGLLVELVLKLKPQVFSPGDYICRKGDVGKEMYIVKEGKLAVVA--DDGV-TVFVTLKAGSVFGEISILNIKGN 390 (536)
T ss_pred HHHhcchhHHHHHHHHhcceeeCCCCeEEecCcccceEEEEEccEEEEEe--cCCc-EEEEEecCCceeeeeEEEEEcCc
Confidence 99999999999999999999999999999999999999999999999876 4444 3567799999999999874
Q ss_pred --cCCcceEEEEecceEEEEechHhHHHHHHHhhhchHHHHHH
Q 003425 470 --NIPQPYTVQVCELCRLLRIDKQSFTNIIDIYFCDGRKVLTN 510 (821)
Q Consensus 470 --~~~~~~~~~a~~~~~~~~i~~~~f~~~l~~~p~~~~~~l~~ 510 (821)
+..|++++++++++.+++++++|+.+.+++||+....++++
T Consensus 391 ~~gNRRtanvrSvGYSDlfvLskdDl~~aL~eYP~a~~~L~~k 433 (536)
T KOG0500|consen 391 KNGNRRTANVRSVGYSDLFVLSKDDLWEALSEYPDARKRLEEK 433 (536)
T ss_pred ccCCcceeeeeeeccceeeEeeHHHHHHHHHhCCHHHHHHHHH
Confidence 57889999999999999999999999999999988877744
No 4
>KOG0501 consensus K+-channel KCNQ [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.7e-62 Score=494.76 Aligned_cols=443 Identities=22% Similarity=0.395 Sum_probs=380.1
Q ss_pred cCCcCeEEcCCChhHHHHHHHHHHHHHHHhhhcceeeeeecCC--CcCeehhHHHHHHHHHHhHhheeeEEEEeCCceEE
Q 003425 59 HFSRNLVFHPDNRWYRAWTKFILIWAVYSSIFTPVEFGFFRGL--SKNLYVLDIVGQIAFLFDIVLQFCLAYRDSQTYRL 136 (821)
Q Consensus 59 ~~~~~~~~~P~s~~~~~w~~~~~~~~~~~~~~~p~~~~f~~~~--~~~~~~~~~~~~~~f~~Di~l~f~t~y~~~~~~~~ 136 (821)
++....++-.++.|+.+||++++++.+|+++++|+.++|.... ...|.++|.++|++|++||+++|+|.|..+|+ ++
T Consensus 203 PKTpPHIiLHYcaFKt~WDWvIL~LTFYTAimVPyNvaFKnk~~~~vs~lvvDSiVDVIF~vDIvLNFHTTFVGPgG-EV 281 (971)
T KOG0501|consen 203 PKTPPHIILHYCAFKTIWDWVILILTFYTAIMVPYNVAFKNKQRNNVSWLVVDSIVDVIFFVDIVLNFHTTFVGPGG-EV 281 (971)
T ss_pred CCCCCeEEEeeehhhhHHHHHHHHHHHHHHheeeeeeeecccccCceeEEEecchhhhhhhhhhhhhcceeeecCCC-ce
Confidence 4566778889999999999999999999999999999997665 34688999999999999999999999999987 99
Q ss_pred eeccHHHHHHHhhhhhHHHHHhhhhHHHHHhhcCch----hHHHHHHHHHHHHHHHHHHHHHhhhhhHhhhHHHHHHHHH
Q 003425 137 ICKRTPIALRYLRSSFIIDLFSCMPWDLIYKASGRK----EAVRYLLWIRLYRVRKVSQFFHKMEKDIRINYMFSRIVKL 212 (821)
Q Consensus 137 v~~~~~I~~~Ylk~~f~iDlis~lP~~~~~~~~~~~----~~~~~l~llrl~rl~r~~~~~~~~~~~~~~~~~~~~~~~~ 212 (821)
|.||+.|..+|+|+||+||++||+|++++..+.+.. ..+..|+..|++|+-|+.|.+. ..+.+ ....++.+
T Consensus 282 vsdPkvIRmNYlKsWFvIDLLSCLPYDi~naF~~~degI~SLFSaLKVVRLLRLGRVaRKLD---~YlEY--GAA~LvLL 356 (971)
T KOG0501|consen 282 VSDPKVIRMNYLKSWFVIDLLSCLPYDIFNAFERDDEGIGSLFSALKVVRLLRLGRVARKLD---HYLEY--GAAVLVLL 356 (971)
T ss_pred ecChhHHhHHHHHHHHHHHHHhcccHHHHHHhhcccccHHHHHHHHHHHHHHHHHHHHHHHH---HHHHh--hHHHHHHH
Confidence 999999999999999999999999999998765443 3344555556666555555444 33333 34457888
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCCCCC-----CCceeccccCCC---CCccc------ccccchHHHHHHHHHHHHHHhh
Q 003425 213 IAVELYCSHIAACIFYYLATTLPPEQE-----GYTWIGSLKMGD---YSYAD------FREIGFWKSYITSMYASVVTMT 278 (821)
Q Consensus 213 ~~~~l~~~h~~ac~~~~i~~~~~~~~~-----~~~w~~~~~~~~---~~~~~------~~~~~~~~~Y~~s~yw~~~t~t 278 (821)
+..+.+++||+||+||.++.++..... ..+|+....++. |+|.. ....+--+.|+.|+||.++.||
T Consensus 357 lC~y~lvAHWlACiWysIGd~ev~~~~~n~i~~dsWL~kLa~~~~tpY~~~~s~~~~~~gGPSr~S~YissLYfTMt~mt 436 (971)
T KOG0501|consen 357 LCVYGLVAHWLACIWYSIGDYEVRDEMDNTIQPDSWLWKLANDIGTPYNYNLSNKGTLVGGPSRTSAYISSLYFTMTCMT 436 (971)
T ss_pred HHHHHHHHHHHHHhheeccchheecccccccccchHHHHHHhhcCCCceeccCCCceeecCCcccceehhhhhhhhhhhh
Confidence 888999999999999999975433222 236776544322 22221 1223445679999999999999
Q ss_pred ccccCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CchhHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 003425 279 TVGYGDVHAVNLREMVFIMIYVSFDMILGAYLIGNMTALIVK-GSKTEKFRDKMTDLMKYINRNRLGRDIRDQIIGHLRL 357 (821)
Q Consensus 279 TvGyGdi~p~t~~e~~~~~~~~i~g~~~~a~~i~~i~~~~~~-~~~~~~~~~~~~~~~~~m~~~~lp~~l~~ri~~y~~~ 357 (821)
|||+|.+.|.|..|++|++++|++|.++||.++|+++.++++ .+.+.+|++.++.+.+||+-+++|+.|.+||.+|.--
T Consensus 437 tvGFGNiA~~TD~EKiF~v~mMii~aLLYAtIFG~vTTI~QQM~s~T~rYHeMlnnVReFlKL~evPK~LsERVMDYvVS 516 (971)
T KOG0501|consen 437 TVGFGNIAPNTDNEKIFGVCMMIIGALLYATIFGHVTTIIQQMTSNTNRYHEMLNNVREFLKLYEVPKGLSERVMDYVVS 516 (971)
T ss_pred cccccccCCCccHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999998 7888999999999999999999999999999999998
Q ss_pred Hhh--ccccHHHHHhhCcHHHHHHHHHhhhhhhccccccccCCCHHHHHHHHHhcccccccccCeEEccCCccCeEEEEE
Q 003425 358 QYE--SSYTEASVLQDIPISIRAKISQTLYLPYIEKVPLFKGCSSEFINQIVIRLHEEFFLPGEVIMEKGNVVDQLYFVC 435 (821)
Q Consensus 358 ~~~--~~~~~~~~l~~lp~~L~~~i~~~~~~~~l~~~~~f~~~~~~~l~~l~~~~~~~~~~~~e~I~~~g~~~~~ly~I~ 435 (821)
.|. ++.+-+++|...|+++|.+|+.++.++.++.+|.|+-.++.+++.|+..++..+..|||.|++.||..|.++||+
T Consensus 517 TWaMtkGiDTeKVL~~CPKDMkADICVHLNRKVFnEHpaFRLASDGCLRaLAm~f~~~H~APGDLlYHtGESvDaLcFvV 596 (971)
T KOG0501|consen 517 TWAMTKGIDTEKVLGYCPKDMKADICVHLNRKVFNEHPAFRLASDGCLRALAMEFQTNHCAPGDLLYHTGESVDALCFVV 596 (971)
T ss_pred HhhhhcCcCHHHHhhhCccccccceeeecchhhhccCcceeeccchhHHHHHHHHHhccCCCcceeeecCCccceEEEEE
Confidence 884 579999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEEeeccCCccceEEEeCCCCccccccccccC--CcceEEEEecceEEEEechHhHHHHHHHhhhchHHHHHHHh
Q 003425 436 LGKLEEVGIEENGTEDYVSYLHPNSSFGEVSILCNI--PQPYTVQVCELCRLLRIDKQSFTNIIDIYFCDGRKVLTNLL 512 (821)
Q Consensus 436 ~G~v~~~~~~~~g~~~~i~~l~~G~~fGe~~~~~~~--~~~~~~~a~~~~~~~~i~~~~f~~~l~~~p~~~~~~l~~~l 512 (821)
+|.+++.+ .+.++++++.||.||+.-.-.+. .+.++++|+++|.+..|.|+.+.++++.|..++..+-+++.
T Consensus 597 sGSLEVIQ-----DDEVVAILGKGDVFGD~FWK~~t~~qs~ANVRALTYcDLH~IKrd~Ll~VLdFYtAFanSFaRNl~ 670 (971)
T KOG0501|consen 597 SGSLEVIQ-----DDEVVAILGKGDVFGDEFWKENTLGQSAANVRALTYCDLHMIKRDKLLKVLDFYTAFANSFARNLT 670 (971)
T ss_pred ecceEEee-----cCcEEEEeecCccchhHHhhhhhhhhhhhhhhhhhhhhhhHHhHHHHHHHHHHHHHHHHHhhhcee
Confidence 99999998 33478999999999987543332 34679999999999999999999999999998888877654
No 5
>KOG0499 consensus Cyclic nucleotide-gated cation channel CNCG4 [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=1e-58 Score=473.88 Aligned_cols=431 Identities=23% Similarity=0.436 Sum_probs=378.1
Q ss_pred cccccCCcCeEEcCCC-hhHHHHHHHHHHHHHHHhhhcceeeeeecCCCc---CeehhHHHHHHHHHHhHh-heeeEEEE
Q 003425 55 SGFRHFSRNLVFHPDN-RWYRAWTKFILIWAVYSSIFTPVEFGFFRGLSK---NLYVLDIVGQIAFLFDIV-LQFCLAYR 129 (821)
Q Consensus 55 ~~~~~~~~~~~~~P~s-~~~~~w~~~~~~~~~~~~~~~p~~~~f~~~~~~---~~~~~~~~~~~~f~~Di~-l~f~t~y~ 129 (821)
..++.....-.|||++ +++..|-.++.++..+++|++|++.+|..+... .|.+.|++||+++++|++ ++-+..|.
T Consensus 209 ~~c~~~~~~~sidp~~~r~Y~~WL~lVtlaf~~N~w~IPlR~sfPyQT~dN~~~Wli~Dy~cDiIYllDmlf~q~Rl~fv 288 (815)
T KOG0499|consen 209 EYCKRIKLPNSIDPYTDRLYLLWLLLVTLAFNWNCWFIPLRLSFPYQTADNIHYWLIADYICDIIYLLDMLFIQPRLQFV 288 (815)
T ss_pred HHHhhcCCCcccCcccchHHHHHHHHHHHHHhhceeEEeeeccCCccccccchhhhhHHHHhhHHHHHHHhhhhhhheee
Confidence 3344444455799999 999999999999999999999999999877653 488999999999999985 46688888
Q ss_pred eCCceEEeeccHHHHHHHhhh-hhHHHHHhhhhHHHHHhhcCchhHHHHHHHHHHHHHHHHHHHHHhhhhhHhhhHHHHH
Q 003425 130 DSQTYRLICKRTPIALRYLRS-SFIIDLFSCMPWDLIYKASGRKEAVRYLLWIRLYRVRKVSQFFHKMEKDIRINYMFSR 208 (821)
Q Consensus 130 ~~~~~~~v~~~~~I~~~Ylk~-~f~iDlis~lP~~~~~~~~~~~~~~~~l~llrl~rl~r~~~~~~~~~~~~~~~~~~~~ 208 (821)
..| .+|.+.+...+||+++ .|-+|++|++|+++.+...+...++ |+.|.+++-.+..++..++..+. +..+.+
T Consensus 289 rgG--~~ik~kndtrk~Yl~sr~FklDllsiLPldllY~~~G~~p~w---R~~R~lK~~sF~e~~~~Le~i~s-~~y~~R 362 (815)
T KOG0499|consen 289 RGG--DIIKDKNDTRKHYLTSRKFKLDLLSILPLDLLYLFFGFNPMW---RANRMLKYTSFFEFNHHLESIMS-KAYIYR 362 (815)
T ss_pred eCc--eEEEechHHHHHHHHhhhhhhhHHhhhhHHHHHHHhccchhh---hhhhHHHHHHHHHHHHHHHHHhc-chhhhh
Confidence 777 5999999999999998 7999999999999999888877765 45555555555555666655444 344558
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCceeccccCCCCCcccccccchHHHHHHHHHHHHHHhhccccCccccC
Q 003425 209 IVKLIAVELYCSHIAACIFYYLATTLPPEQEGYTWIGSLKMGDYSYADFREIGFWKSYITSMYASVVTMTTVGYGDVHAV 288 (821)
Q Consensus 209 ~~~~~~~~l~~~h~~ac~~~~i~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~Y~~s~yw~~~t~tTvGyGdi~p~ 288 (821)
+++...++++++|+.||+||+.+.....+ .+.|+.+.. ...|+.||||++.|+||+| |...|+
T Consensus 363 V~rT~~YmlyilHinacvYY~~SayqglG--~~rWVydg~--------------Gn~YiRCyyfa~kt~~tiG-~~P~P~ 425 (815)
T KOG0499|consen 363 VIRTTGYLLYILHINACVYYWASAYQGLG--TTRWVYDGE--------------GNEYIRCYYFAVKTLITIG-GLPEPQ 425 (815)
T ss_pred hHHHHHHHHHHHhhhHHHHHHHHhhcccc--cceeEEcCC--------------CCceeeehhhHHHHHHHhc-CCCCcc
Confidence 99999999999999999999988765443 457875532 2369999999999999999 999999
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CchhHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhhcc--ccH
Q 003425 289 NLREMVFIMIYVSFDMILGAYLIGNMTALIVK-GSKTEKFRDKMTDLMKYINRNRLGRDIRDQIIGHLRLQYESS--YTE 365 (821)
Q Consensus 289 t~~e~~~~~~~~i~g~~~~a~~i~~i~~~~~~-~~~~~~~~~~~~~~~~~m~~~~lp~~l~~ri~~y~~~~~~~~--~~~ 365 (821)
|..|++|..+--+.|+++|+.+||.|-.+++. +.+++.|+..|++.-.||++.++|...|+||+.+|+|.|+++ .||
T Consensus 426 ~~~E~Vf~~~~w~mGVFvFslliGQmRDvi~aAt~nq~~fr~~mD~tl~ym~~~~i~kevqnRVr~WyeyTW~sQr~LDE 505 (815)
T KOG0499|consen 426 TLFEIVFQLLNWFMGVFVFSLLIGQMRDVIGAATANQNYFRACMDDTLAYMNNYSIPKEVQNRVRTWYEYTWDSQRMLDE 505 (815)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHhhhhhhccccH
Confidence 99999999999999999999999999999998 777889999999999999999999999999999999999764 899
Q ss_pred HHHHhhCcHHHHHHHHHhhhhhhccccccccCCCHHHHHHHHHhcccccccccCeEEccCCccCeEEEEEeeEEEEEeec
Q 003425 366 ASVLQDIPISIRAKISQTLYLPYIEKVPLFKGCSSEFINQIVIRLHEEFFLPGEVIMEKGNVVDQLYFVCLGKLEEVGIE 445 (821)
Q Consensus 366 ~~~l~~lp~~L~~~i~~~~~~~~l~~~~~f~~~~~~~l~~l~~~~~~~~~~~~e~I~~~g~~~~~ly~I~~G~v~~~~~~ 445 (821)
.++++.||..||.+++..++..++.++.+|++++.+.+.+++.+++.+.|.|||+|+++||.+.+||+|..|.|++.. .
T Consensus 506 s~ll~~LP~klq~dlAi~V~y~~lSKVqLFq~Cdr~mirDmllrLRsV~yLPgDfVCkKGeiGkEMYIIk~GqvQVlG-G 584 (815)
T KOG0499|consen 506 SDLLKTLPTKLQLDLAIDVNYSILSKVQLFQGCDRQMIRDMLLRLRSVLYLPGDFVCKKGEIGKEMYIIKHGQVQVLG-G 584 (815)
T ss_pred HHHHHhcchhheeeeeEEeehhhhhHHHHhhhhHHHHHHHHHHHhhceeecCCceeeecccccceeEEeecceEEEec-C
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999986 3
Q ss_pred cCCccceEEEeCCCCccccccccc---cCCcceEEEEecceEEEEechHhHHHHHHHhhhchHHHHHH
Q 003425 446 ENGTEDYVSYLHPNSSFGEVSILC---NIPQPYTVQVCELCRLLRIDKQSFTNIIDIYFCDGRKVLTN 510 (821)
Q Consensus 446 ~~g~~~~i~~l~~G~~fGe~~~~~---~~~~~~~~~a~~~~~~~~i~~~~f~~~l~~~p~~~~~~l~~ 510 (821)
++| +.++..|++|+.|||++++. +..|+++++|.++|.++.++++++.+++..||+-.+.+.+.
T Consensus 585 p~~-~~Vl~tL~~GsVFGEISLLaigG~nRRTAnV~a~Gf~nLfvL~KkdLneil~~YP~sq~iLrkk 651 (815)
T KOG0499|consen 585 PDG-TKVLVTLKAGSVFGEISLLAIGGGNRRTANVVAHGFANLFVLDKKDLNEILVHYPDSQRILRKK 651 (815)
T ss_pred CCC-CEEEEEecccceeeeeeeeeecCCCccchhhhhcccceeeEecHhHHHHHHHhCccHHHHHHHH
Confidence 333 45788899999999999884 67889999999999999999999999999999865554443
No 6
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.1e-36 Score=265.56 Aligned_cols=177 Identities=32% Similarity=0.390 Sum_probs=150.4
Q ss_pred chhhhHhhhHHHHhhcCCHHHHHHHH-HcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCcHHHH
Q 003425 534 KHEAELALKVNSAAYHGDLYQLEGLI-RAGADPNRTDYDGRSPLHLAASRGYEEIMTFLIQK-GVDINLKDNFGNTPLLE 611 (821)
Q Consensus 534 ~~~~~~~~~L~~A~~~g~~~~v~~Ll-~~g~~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~tpL~~ 611 (821)
..|.+|.||||+||..|+.+++++|+ +.+..+|.+|..||||||.||..|+.++|+.|+.+ |+|+|..++.|.||||+
T Consensus 33 r~dqD~Rt~LHwa~S~g~~eiv~fLlsq~nv~~ddkDdaGWtPlhia~s~g~~evVk~Ll~r~~advna~tn~G~T~LHy 112 (226)
T KOG4412|consen 33 RDDQDGRTPLHWACSFGHVEIVYFLLSQPNVKPDDKDDAGWTPLHIAASNGNDEVVKELLNRSGADVNATTNGGQTCLHY 112 (226)
T ss_pred cccccCCceeeeeeecCchhHHHHHHhcCCCCCCCccccCCchhhhhhhcCcHHHHHHHhcCCCCCcceecCCCcceehh
Confidence 44558888888888888888888888 45777888888888888888888888888888888 88888888888888888
Q ss_pred HHHcCChHHHHHHHhcCCCCCccc--ccchhhHHHhcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHH
Q 003425 612 AIKYGNDGAASLLVKEGASLNVEE--AGSFLCTAVARGDSDLLKRVLSNGIDPNTRDYDLRTPLHVAASEGLYLMAKLLV 689 (821)
Q Consensus 612 A~~~~~~~~v~~Ll~~~~~~~~~~--~~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll 689 (821)
|+..|+.+++++|+++|+.++.++ |.||||.|+.-|+.+++++|+..|+.+|.+|..|+||||.|...|+.+...+|+
T Consensus 113 AagK~r~eIaqlLle~ga~i~~kD~~~qtplHRAAavGklkvie~Li~~~a~~n~qDk~G~TpL~~al~e~~~d~a~lLV 192 (226)
T KOG4412|consen 113 AAGKGRLEIAQLLLEKGALIRIKDKQGQTPLHRAAAVGKLKVIEYLISQGAPLNTQDKYGFTPLHHALAEGHPDVAVLLV 192 (226)
T ss_pred hhcCChhhHHHHHHhcCCCCcccccccCchhHHHHhccchhhHHHHHhcCCCCCcccccCccHHHHHHhccCchHHHHHH
Confidence 888888888888888888887765 778888888888888888888888888888888888888888888888888888
Q ss_pred HcCCCCCCCCCCCCCHHHHHHH
Q 003425 690 EAGASVFPKDRWGNTPLDEGRM 711 (821)
Q Consensus 690 ~~ga~~~~~d~~g~t~l~~A~~ 711 (821)
++|||++..|+.| ||+..|+-
T Consensus 193 ~~gAd~~~edke~-t~~~~a~~ 213 (226)
T KOG4412|consen 193 RAGADTDREDKEG-TALRIACN 213 (226)
T ss_pred HhccceeeccccC-chHHHHHH
Confidence 8888888888877 88776654
No 7
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=8.1e-36 Score=261.93 Aligned_cols=197 Identities=31% Similarity=0.405 Sum_probs=184.4
Q ss_pred HhhhHHHHhhcCCHHHHHHHHHcCC-CCCCCCC-CCCcHHHHHHHcCCHHHHHHHHH-cCCCCCCCCCCCCcHHHHHHHc
Q 003425 539 LALKVNSAAYHGDLYQLEGLIRAGA-DPNRTDY-DGRSPLHLAASRGYEEIMTFLIQ-KGVDINLKDNFGNTPLLEAIKY 615 (821)
Q Consensus 539 ~~~~L~~A~~~g~~~~v~~Ll~~g~-~~n~~d~-~g~t~L~~A~~~g~~~~v~~Ll~-~g~~~~~~~~~g~tpL~~A~~~ 615 (821)
+.++.+.+|...-...++.+++... .+|.++. +|+||||+||+.|+.+++.+|++ .+..+|.+|..|+||||.||..
T Consensus 3 ~~~~~~~~~~~~~~~kveel~~s~~kSL~~r~dqD~Rt~LHwa~S~g~~eiv~fLlsq~nv~~ddkDdaGWtPlhia~s~ 82 (226)
T KOG4412|consen 3 YASLGKAICENCEEFKVEELIQSDPKSLNARDDQDGRTPLHWACSFGHVEIVYFLLSQPNVKPDDKDDAGWTPLHIAASN 82 (226)
T ss_pred ccchHHHHHhhchHHHHHHHHhcChhhhhccccccCCceeeeeeecCchhHHHHHHhcCCCCCCCccccCCchhhhhhhc
Confidence 4567788888888888999998876 5777765 99999999999999999999995 5888999999999999999999
Q ss_pred CChHHHHHHHhc-CCCCCcc--cccchhhHHHhcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHcC
Q 003425 616 GNDGAASLLVKE-GASLNVE--EAGSFLCTAVARGDSDLLKRVLSNGIDPNTRDYDLRTPLHVAASEGLYLMAKLLVEAG 692 (821)
Q Consensus 616 ~~~~~v~~Ll~~-~~~~~~~--~~~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g 692 (821)
|+.++|+.|+.+ |+++|.. .|.|+||+|+..|..+++++|+++|+.++.+|..|.||||.|+..|+.+++++|+..|
T Consensus 83 g~~evVk~Ll~r~~advna~tn~G~T~LHyAagK~r~eIaqlLle~ga~i~~kD~~~qtplHRAAavGklkvie~Li~~~ 162 (226)
T KOG4412|consen 83 GNDEVVKELLNRSGADVNATTNGGQTCLHYAAGKGRLEIAQLLLEKGALIRIKDKQGQTPLHRAAAVGKLKVIEYLISQG 162 (226)
T ss_pred CcHHHHHHHhcCCCCCcceecCCCcceehhhhcCChhhHHHHHHhcCCCCcccccccCchhHHHHhccchhhHHHHHhcC
Confidence 999999999998 9999985 4889999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccCCCC
Q 003425 693 ASVFPKDRWGNTPLDEGRMCGNKNLIKLLEDAKSTQLLEFPHG 735 (821)
Q Consensus 693 a~~~~~d~~g~t~l~~A~~~~~~~i~~~Ll~~~a~~~~~~~~~ 735 (821)
+.+|.+|+.|+||||.|...|+.++..+|+++||+....++.|
T Consensus 163 a~~n~qDk~G~TpL~~al~e~~~d~a~lLV~~gAd~~~edke~ 205 (226)
T KOG4412|consen 163 APLNTQDKYGFTPLHHALAEGHPDVAVLLVRAGADTDREDKEG 205 (226)
T ss_pred CCCCcccccCccHHHHHHhccCchHHHHHHHhccceeeccccC
Confidence 9999999999999999999999999999999999999998876
No 8
>PHA02791 ankyrin-like protein; Provisional
Probab=100.00 E-value=5.1e-34 Score=290.61 Aligned_cols=198 Identities=22% Similarity=0.164 Sum_probs=183.3
Q ss_pred chhhhHhhhHHHHhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHH
Q 003425 534 KHEAELALKVNSAAYHGDLYQLEGLIRAGADPNRTDYDGRSPLHLAASRGYEEIMTFLIQKGVDINLKDNFGNTPLLEAI 613 (821)
Q Consensus 534 ~~~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~tpL~~A~ 613 (821)
..|.+|.||||+|+..|+.++++.|++.|++++..+ |.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+
T Consensus 25 ~~D~~G~TpLh~Aa~~g~~eiv~~Ll~~ga~~n~~d--~~TpLh~Aa~~g~~eiV~lLL~~Gadvn~~d~~G~TpLh~Aa 102 (284)
T PHA02791 25 KADVHGHSALYYAIADNNVRLVCTLLNAGALKNLLE--NEFPLHQAATLEDTKIVKILLFSGMDDSQFDDKGNTALYYAV 102 (284)
T ss_pred CCCCCCCcHHHHHHHcCCHHHHHHHHHCcCCCcCCC--CCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
Confidence 467889999999999999999999999999998764 789999999999999999999999999999999999999999
Q ss_pred HcCChHHHHHHHhcCCCCCccc--c-cchhhHHHhcCCHHHHHHHHHCCCCCCCCC-CCCCcHHHHHHHcCcHHHHHHHH
Q 003425 614 KYGNDGAASLLVKEGASLNVEE--A-GSFLCTAVARGDSDLLKRVLSNGIDPNTRD-YDLRTPLHVAASEGLYLMAKLLV 689 (821)
Q Consensus 614 ~~~~~~~v~~Ll~~~~~~~~~~--~-~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~d-~~g~T~Lh~A~~~g~~~~v~~Ll 689 (821)
..|+.+++++|+++|++++..+ | .||||.|+..|+.+++++|+++|.+. .| ..|.||||+|+..|+.+++++|+
T Consensus 103 ~~g~~eivk~Ll~~gadin~~~~~g~~TpL~~Aa~~g~~eivk~LL~~~~~~--~d~~~g~TpLh~Aa~~g~~eiv~lLL 180 (284)
T PHA02791 103 DSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPST--FDLAILLSCIHITIKNGHVDMMILLL 180 (284)
T ss_pred HcCCHHHHHHHHHCCCCcCccCCCCCcHHHHHHHHcCCHHHHHHHHhcCCcc--cccccCccHHHHHHHcCCHHHHHHHH
Confidence 9999999999999999987654 4 48999999999999999999987654 23 35899999999999999999999
Q ss_pred HcCCCCCCCCCCCCCH-HHHHHHcCCHHHHHHHHhccccccccCCCC
Q 003425 690 EAGASVFPKDRWGNTP-LDEGRMCGNKNLIKLLEDAKSTQLLEFPHG 735 (821)
Q Consensus 690 ~~ga~~~~~d~~g~t~-l~~A~~~~~~~i~~~Ll~~~a~~~~~~~~~ 735 (821)
++||+++.+|..|.|| ||+|+..|+.+++++|+++|++++.++..+
T Consensus 181 ~~gAd~n~~d~~g~t~~L~~Aa~~~~~e~v~lLl~~Ga~in~~~~~~ 227 (284)
T PHA02791 181 DYMTSTNTNNSLLFIPDIKLAIDNKDLEMLQALFKYDINIYSVNLEN 227 (284)
T ss_pred HCCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCccCcccC
Confidence 9999999999999987 999999999999999999999998877643
No 9
>PHA02791 ankyrin-like protein; Provisional
Probab=100.00 E-value=8.4e-32 Score=274.33 Aligned_cols=216 Identities=17% Similarity=0.179 Sum_probs=189.8
Q ss_pred chHHHHHHHhcCCcchhhhhhhcccccccccchhhhHhhhHHHHhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHc
Q 003425 503 DGRKVLTNLLQGKESDLRLKQLQSDITFHISKHEAELALKVNSAAYHGDLYQLEGLIRAGADPNRTDYDGRSPLHLAASR 582 (821)
Q Consensus 503 ~~~~~l~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~ 582 (821)
.+...+..+......+.....++.+.+.+. . ++.||||.|+..|+.++++.|++.|++++.+|..|+||||+|+..
T Consensus 29 ~G~TpLh~Aa~~g~~eiv~~Ll~~ga~~n~--~--d~~TpLh~Aa~~g~~eiV~lLL~~Gadvn~~d~~G~TpLh~Aa~~ 104 (284)
T PHA02791 29 HGHSALYYAIADNNVRLVCTLLNAGALKNL--L--ENEFPLHQAATLEDTKIVKILLFSGMDDSQFDDKGNTALYYAVDS 104 (284)
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHCcCCCcC--C--CCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHc
Confidence 355667777776666655555655544332 2 357999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCCCCCCCCC-cHHHHHHHcCChHHHHHHHhcCCCCCc-ccccchhhHHHhcCCHHHHHHHHHCCC
Q 003425 583 GYEEIMTFLIQKGVDINLKDNFGN-TPLLEAIKYGNDGAASLLVKEGASLNV-EEAGSFLCTAVARGDSDLLKRVLSNGI 660 (821)
Q Consensus 583 g~~~~v~~Ll~~g~~~~~~~~~g~-tpL~~A~~~~~~~~v~~Ll~~~~~~~~-~~~~t~l~~A~~~~~~~~v~~Ll~~g~ 660 (821)
|+.+++++|+++|++++.++..|. ||||+|+..|+.+++++|++++++... ..|.||||.|+..|+.+++++|+++|+
T Consensus 105 g~~eivk~Ll~~gadin~~~~~g~~TpL~~Aa~~g~~eivk~LL~~~~~~~d~~~g~TpLh~Aa~~g~~eiv~lLL~~gA 184 (284)
T PHA02791 105 GNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDLAILLSCIHITIKNGHVDMMILLLDYMT 184 (284)
T ss_pred CCHHHHHHHHHCCCCcCccCCCCCcHHHHHHHHcCCHHHHHHHHhcCCcccccccCccHHHHHHHcCCHHHHHHHHHCCC
Confidence 999999999999999999998885 899999999999999999999865433 358999999999999999999999999
Q ss_pred CCCCCCCCCCcH-HHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcccccc
Q 003425 661 DPNTRDYDLRTP-LHVAASEGLYLMAKLLVEAGASVFPKDRWGNTPLDEGRMCGNKNLIKLLEDAKSTQL 729 (821)
Q Consensus 661 ~~~~~d~~g~T~-Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~i~~~Ll~~~a~~~ 729 (821)
++|.+|..|.|| ||+|+..|+.+++++|+++|++++.+|..| ||| ++.|++++|+++.++-.
T Consensus 185 d~n~~d~~g~t~~L~~Aa~~~~~e~v~lLl~~Ga~in~~~~~~-~~l------~~~e~~~~ll~~~~~~~ 247 (284)
T PHA02791 185 STNTNNSLLFIPDIKLAIDNKDLEMLQALFKYDINIYSVNLEN-VLL------DDAEIAKMIIEKHVEYK 247 (284)
T ss_pred CCCcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCccCcccC-ccC------CCHHHHHHHHHhhhhhc
Confidence 999999999987 999999999999999999999999999854 666 89999999999987753
No 10
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.98 E-value=4.5e-32 Score=285.42 Aligned_cols=208 Identities=30% Similarity=0.384 Sum_probs=194.0
Q ss_pred hhhHhhhHHHHhhcCCHHHHHHHHHc-CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCC-CCCCcHHHHHH
Q 003425 536 EAELALKVNSAAYHGDLYQLEGLIRA-GADPNRTDYDGRSPLHLAASRGYEEIMTFLIQKGVDINLKD-NFGNTPLLEAI 613 (821)
Q Consensus 536 ~~~~~~~L~~A~~~g~~~~v~~Ll~~-g~~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~-~~g~tpL~~A~ 613 (821)
+......++.|++.|+++.|+.|++. |.++|..|.+|.|+||+||.+++.+++++|+++|+++|..+ .-+.||||+|+
T Consensus 41 ~d~~~~~~v~A~q~G~l~~v~~lve~~g~~v~~~D~~g~tlLHWAAiNNrl~v~r~li~~gadvn~~gG~l~stPLHWAa 120 (600)
T KOG0509|consen 41 EDSSLDDIVKATQYGELETVKELVESEGESVNNPDREGVTLLHWAAINNRLDVARYLISHGADVNAIGGVLGSTPLHWAA 120 (600)
T ss_pred cchhhhhhhhHhhcchHHHHHHHHhhcCcCCCCCCcCCccceeHHHHcCcHHHHHHHHHcCCCccccCCCCCCCcchHHH
Confidence 33445678999999999999999999 99999999999999999999999999999999999999998 67889999999
Q ss_pred HcCChHHHHHHHhcCCCCCccc--ccchhhHHHhcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHc
Q 003425 614 KYGNDGAASLLVKEGASLNVEE--AGSFLCTAVARGDSDLLKRVLSNGIDPNTRDYDLRTPLHVAASEGLYLMAKLLVEA 691 (821)
Q Consensus 614 ~~~~~~~v~~Ll~~~~~~~~~~--~~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~ 691 (821)
++|+..+|.+|+++|||++..| |.+|+|.|+..|+.-++-+|+.+|+|+|.+|.+|+||||+|+.+|+...++.|+..
T Consensus 121 r~G~~~vv~lLlqhGAdpt~~D~~G~~~lHla~~~~~~~~vayll~~~~d~d~~D~~grTpLmwAaykg~~~~v~~LL~f 200 (600)
T KOG0509|consen 121 RNGHISVVDLLLQHGADPTLKDKQGLTPLHLAAQFGHTALVAYLLSKGADIDLRDNNGRTPLMWAAYKGFALFVRRLLKF 200 (600)
T ss_pred HcCcHHHHHHHHHcCCCCceecCCCCcHHHHHHHhCchHHHHHHHHhcccCCCcCCCCCCHHHHHHHhcccHHHHHHHHh
Confidence 9999999999999999999876 78999999999999999999999999999999999999999999998889999999
Q ss_pred CCCCCCCC-CCCCCHHHHHHHcCCHHHHHHHHhccccccccCCCCCCcccccc
Q 003425 692 GASVFPKD-RWGNTPLDEGRMCGNKNLIKLLEDAKSTQLLEFPHGFQDTADKR 743 (821)
Q Consensus 692 ga~~~~~d-~~g~t~l~~A~~~~~~~i~~~Ll~~~a~~~~~~~~~~~~~~~~~ 743 (821)
|++++..| ..|+||||+|+..||..++.+|++.|++....+.+|.++.+-..
T Consensus 201 ~a~~~~~d~~~g~TpLHwa~~~gN~~~v~Ll~~g~~~~d~~~~~g~tp~~LA~ 253 (600)
T KOG0509|consen 201 GASLLLTDDNHGNTPLHWAVVGGNLTAVKLLLEGGADLDKTNTNGKTPFDLAQ 253 (600)
T ss_pred cccccccccccCCchHHHHHhcCCcceEehhhhcCCcccccccCCCCHHHHHH
Confidence 99999988 89999999999999999999889999999998888888766443
No 11
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.98 E-value=2.2e-31 Score=299.02 Aligned_cols=206 Identities=27% Similarity=0.326 Sum_probs=188.5
Q ss_pred hhhHhhhHHHHhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCH------------------------------
Q 003425 536 EAELALKVNSAAYHGDLYQLEGLIRAGADPNRTDYDGRSPLHLAASRGYE------------------------------ 585 (821)
Q Consensus 536 ~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~g~~------------------------------ 585 (821)
...+.||||.||..|+.++|+.|++.|+++|.+|..|.||||+||..|+.
T Consensus 34 ~~~~~tPLh~A~~~g~~e~vk~Ll~~gadvn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~l~~a~~~~~ 113 (477)
T PHA02878 34 SLIPFIPLHQAVEARNLDVVKSLLTRGHNVNQPDHRDLTPLHIICKEPNKLGMKEMIRSINKCSVFYTLVAIKDAFNNRN 113 (477)
T ss_pred cccCcchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCccHhHHHHHHHHHhccccccchhhHHHHHHcCC
Confidence 34567899999999999999999999999999999999999999876543
Q ss_pred ----------------------------------HHHHHHHHcCCCCCCCCCC-CCcHHHHHHHcCChHHHHHHHhcCCC
Q 003425 586 ----------------------------------EIMTFLIQKGVDINLKDNF-GNTPLLEAIKYGNDGAASLLVKEGAS 630 (821)
Q Consensus 586 ----------------------------------~~v~~Ll~~g~~~~~~~~~-g~tpL~~A~~~~~~~~v~~Ll~~~~~ 630 (821)
+++++|+++|++++..+.. |.||||+|+..|+.+++++|+++|++
T Consensus 114 ~ei~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~gadin~~~~~~g~tpLh~A~~~~~~~iv~~Ll~~gad 193 (477)
T PHA02878 114 VEIFKIILTNRYKNIQTIDLVYIDKKSKDDIIEAEITKLLLSYGADINMKDRHKGNTALHYATENKDQRLTELLLSYGAN 193 (477)
T ss_pred HHHHHHHHhCcccCcccCcHHHHhhccchhhHHHHHHHHHHHcCCCCCccCCCCCCCHHHHHHhCCCHHHHHHHHHCCCC
Confidence 2677788889999999988 99999999999999999999999999
Q ss_pred CCcc--cccchhhHHHhcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHc-CcHHHHHHHHHcCCCCCCCCC-CCCCHH
Q 003425 631 LNVE--EAGSFLCTAVARGDSDLLKRVLSNGIDPNTRDYDLRTPLHVAASE-GLYLMAKLLVEAGASVFPKDR-WGNTPL 706 (821)
Q Consensus 631 ~~~~--~~~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~T~Lh~A~~~-g~~~~v~~Ll~~ga~~~~~d~-~g~t~l 706 (821)
++.. .|.||||.|+..|+.+++++|+++|++++.+|..|.||||+|+.. ++.+++++|+++|++++.++. .|.|||
T Consensus 194 ~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~gadvn~~~~~~g~TpL 273 (477)
T PHA02878 194 VNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTDARDKCGNTPLHISVGYCKDYDILKLLLEHGVDVNAKSYILGLTAL 273 (477)
T ss_pred CCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCCCHH
Confidence 9875 488999999999999999999999999999999999999999976 789999999999999999986 799999
Q ss_pred HHHHHcCCHHHHHHHHhccccccccCCCCCCcccccc
Q 003425 707 DEGRMCGNKNLIKLLEDAKSTQLLEFPHGFQDTADKR 743 (821)
Q Consensus 707 ~~A~~~~~~~i~~~Ll~~~a~~~~~~~~~~~~~~~~~ 743 (821)
|+| .++.+++++|+++|++++..+..|.+|...+.
T Consensus 274 h~A--~~~~~~v~~Ll~~gadin~~d~~g~TpL~~A~ 308 (477)
T PHA02878 274 HSS--IKSERKLKLLLEYGADINSLNSYKLTPLSSAV 308 (477)
T ss_pred HHH--ccCHHHHHHHHHCCCCCCCcCCCCCCHHHHHH
Confidence 999 57889999999999999999999999987553
No 12
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.98 E-value=4e-31 Score=292.35 Aligned_cols=224 Identities=21% Similarity=0.157 Sum_probs=200.6
Q ss_pred HHHHHHhcCCcchhhhhhhcccccccccchhhhHhhhHHHHhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCH
Q 003425 506 KVLTNLLQGKESDLRLKQLQSDITFHISKHEAELALKVNSAAYHGDLYQLEGLIRAGADPNRTDYDGRSPLHLAASRGYE 585 (821)
Q Consensus 506 ~~l~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~g~~ 585 (821)
.-+..+...+..+.....++++.+ .+..+..|.||||.|+..|+.++++.|++.|++++..+.++.||||.|+..|+.
T Consensus 4 ~~L~~A~~~g~~~iv~~Ll~~g~~--~n~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~t~L~~A~~~g~~ 81 (413)
T PHA02875 4 VALCDAILFGELDIARRLLDIGIN--PNFEIYDGISPIKLAMKFRDSEAIKLLMKHGAIPDVKYPDIESELHDAVEEGDV 81 (413)
T ss_pred hHHHHHHHhCCHHHHHHHHHCCCC--CCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCccccCCCcccHHHHHHHCCCH
Confidence 345566666676666667766554 445566799999999999999999999999999999989999999999999999
Q ss_pred HHHHHHHHcCCCCC-CCCCCCCcHHHHHHHcCChHHHHHHHhcCCCCCcc--cccchhhHHHhcCCHHHHHHHHHCCCCC
Q 003425 586 EIMTFLIQKGVDIN-LKDNFGNTPLLEAIKYGNDGAASLLVKEGASLNVE--EAGSFLCTAVARGDSDLLKRVLSNGIDP 662 (821)
Q Consensus 586 ~~v~~Ll~~g~~~~-~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~--~~~t~l~~A~~~~~~~~v~~Ll~~g~~~ 662 (821)
+++++|++.|++++ ..+..|.||||+|+..|+.+++++|+++|++++.. +|.||||.|+..|+.+++++|+++|+++
T Consensus 82 ~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~gad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~~~ 161 (413)
T PHA02875 82 KAVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACL 161 (413)
T ss_pred HHHHHHHHcCCcccccccCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCC
Confidence 99999999998764 45678999999999999999999999999999875 4889999999999999999999999999
Q ss_pred CCCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCC-CHHHHHHHcCCHHHHHHHHhcccccccc
Q 003425 663 NTRDYDLRTPLHVAASEGLYLMAKLLVEAGASVFPKDRWGN-TPLDEGRMCGNKNLIKLLEDAKSTQLLE 731 (821)
Q Consensus 663 ~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~-t~l~~A~~~~~~~i~~~Ll~~~a~~~~~ 731 (821)
+.+|..|.||||+|+..|+.+++++|+++|++++..+..|. ||+|+|+..|+.+++++|+++|++++..
T Consensus 162 ~~~d~~g~TpL~~A~~~g~~eiv~~Ll~~ga~~n~~~~~~~~t~l~~A~~~~~~~iv~~Ll~~gad~n~~ 231 (413)
T PHA02875 162 DIEDCCGCTPLIIAMAKGDIAICKMLLDSGANIDYFGKNGCVAALCYAIENNKIDIVRLFIKRGADCNIM 231 (413)
T ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHHCCcCcchH
Confidence 99999999999999999999999999999999999998874 8899999999999999999999998765
No 13
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.97 E-value=9.6e-31 Score=290.41 Aligned_cols=234 Identities=24% Similarity=0.255 Sum_probs=149.9
Q ss_pred HHHHHHhcCCcchhhhhhhcccccccccchhhhHhhhHHHHhhcCCHHHHHHHHHcCC----------------------
Q 003425 506 KVLTNLLQGKESDLRLKQLQSDITFHISKHEAELALKVNSAAYHGDLYQLEGLIRAGA---------------------- 563 (821)
Q Consensus 506 ~~l~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~g~---------------------- 563 (821)
..+..+...+..+.....++.+.+ ++..+..|.||||.|+..|+.+++++|++.|+
T Consensus 37 tpL~~A~~~g~~~iv~~Ll~~Ga~--~n~~~~~~~t~L~~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~i~~ll~~g 114 (434)
T PHA02874 37 TPLIDAIRSGDAKIVELFIKHGAD--INHINTKIPHPLLTAIKIGAHDIIKLLIDNGVDTSILPIPCIEKDMIKTILDCG 114 (434)
T ss_pred CHHHHHHHcCCHHHHHHHHHCCCC--CCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcchhccCCHHHHHHHHHCc
Confidence 444555555554444444444433 23344455666666666666666666665443
Q ss_pred -CCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCChHHHHHHHhcCCCCCcc--cccchh
Q 003425 564 -DPNRTDYDGRSPLHLAASRGYEEIMTFLIQKGVDINLKDNFGNTPLLEAIKYGNDGAASLLVKEGASLNVE--EAGSFL 640 (821)
Q Consensus 564 -~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~--~~~t~l 640 (821)
+++.++..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++.. .|.|||
T Consensus 115 ~d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n~~~~~g~tpL 194 (434)
T PHA02874 115 IDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNGESPL 194 (434)
T ss_pred CCCCCCCCCCccHHHHHHHCCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHH
Confidence 33445556666666666666666666666666666666666666666666666666666666666655443 355666
Q ss_pred hHHHhcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC-CHHHHH
Q 003425 641 CTAVARGDSDLLKRVLSNGIDPNTRDYDLRTPLHVAASEGLYLMAKLLVEAGASVFPKDRWGNTPLDEGRMCG-NKNLIK 719 (821)
Q Consensus 641 ~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~-~~~i~~ 719 (821)
|.|+..|+.+++++|+++|++++.++..|.||||.|+..+. +.+++|+ .|++++.+|..|+||||+|+..+ +.++++
T Consensus 195 ~~A~~~g~~~iv~~Ll~~g~~i~~~~~~g~TpL~~A~~~~~-~~i~~Ll-~~~~in~~d~~G~TpLh~A~~~~~~~~iv~ 272 (434)
T PHA02874 195 HNAAEYGDYACIKLLIDHGNHIMNKCKNGFTPLHNAIIHNR-SAIELLI-NNASINDQDIDGSTPLHHAINPPCDIDIID 272 (434)
T ss_pred HHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHCCh-HHHHHHH-cCCCCCCcCCCCCCHHHHHHhcCCcHHHHH
Confidence 66666666666666666666666666666666666665543 3444444 46777788888999999999875 789999
Q ss_pred HHHhccccccccCCCCCCcccccc
Q 003425 720 LLEDAKSTQLLEFPHGFQDTADKR 743 (821)
Q Consensus 720 ~Ll~~~a~~~~~~~~~~~~~~~~~ 743 (821)
+|+++|++.+..+..|.++...+.
T Consensus 273 ~Ll~~gad~n~~d~~g~TpL~~A~ 296 (434)
T PHA02874 273 ILLYHKADISIKDNKGENPIDTAF 296 (434)
T ss_pred HHHHCcCCCCCCCCCCCCHHHHHH
Confidence 999999999999999998876543
No 14
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.97 E-value=8.4e-31 Score=289.80 Aligned_cols=199 Identities=25% Similarity=0.277 Sum_probs=190.4
Q ss_pred HhhhHHHHhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCh
Q 003425 539 LALKVNSAAYHGDLYQLEGLIRAGADPNRTDYDGRSPLHLAASRGYEEIMTFLIQKGVDINLKDNFGNTPLLEAIKYGND 618 (821)
Q Consensus 539 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~tpL~~A~~~~~~ 618 (821)
.+++||.|+..|+.++++.|++.|+++|..+.+|.||||+|+..|+.+++++|+++|++++..+..+.||||.|+..|+.
T Consensus 2 ~~~~L~~A~~~g~~~iv~~Ll~~g~~~n~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~t~L~~A~~~g~~ 81 (413)
T PHA02875 2 DQVALCDAILFGELDIARRLLDIGINPNFEIYDGISPIKLAMKFRDSEAIKLLMKHGAIPDVKYPDIESELHDAVEEGDV 81 (413)
T ss_pred CchHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCccccCCCcccHHHHHHHCCCH
Confidence 36899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCCc---ccccchhhHHHhcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCC
Q 003425 619 GAASLLVKEGASLNV---EEAGSFLCTAVARGDSDLLKRVLSNGIDPNTRDYDLRTPLHVAASEGLYLMAKLLVEAGASV 695 (821)
Q Consensus 619 ~~v~~Ll~~~~~~~~---~~~~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~ga~~ 695 (821)
++++.|++.|++.+. .+|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|+++
T Consensus 82 ~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~gad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~~~ 161 (413)
T PHA02875 82 KAVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACL 161 (413)
T ss_pred HHHHHHHHcCCcccccccCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCC
Confidence 999999999986653 46899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccCCCCCC
Q 003425 696 FPKDRWGNTPLDEGRMCGNKNLIKLLEDAKSTQLLEFPHGFQ 737 (821)
Q Consensus 696 ~~~d~~g~t~l~~A~~~~~~~i~~~Ll~~~a~~~~~~~~~~~ 737 (821)
+.+|..|.||||+|+..|+.+++++|+++|++++.....|..
T Consensus 162 ~~~d~~g~TpL~~A~~~g~~eiv~~Ll~~ga~~n~~~~~~~~ 203 (413)
T PHA02875 162 DIEDCCGCTPLIIAMAKGDIAICKMLLDSGANIDYFGKNGCV 203 (413)
T ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCcCCCCCCc
Confidence 999999999999999999999999999999999988877653
No 15
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.97 E-value=6.1e-31 Score=297.54 Aligned_cols=218 Identities=27% Similarity=0.331 Sum_probs=184.8
Q ss_pred HhcCCcchhhhhhhcccccccccchhhhHhhhHHHHh--hcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcC--CHH
Q 003425 511 LLQGKESDLRLKQLQSDITFHISKHEAELALKVNSAA--YHGDLYQLEGLIRAGADPNRTDYDGRSPLHLAASRG--YEE 586 (821)
Q Consensus 511 ~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~A~--~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~g--~~~ 586 (821)
+......+.....++.+.+. +..+..|.||||.|+ ..|+.++++.|++.|++++..+..|.||||+|+..| +.+
T Consensus 80 a~~~~~~~iv~~Ll~~ga~i--~~~d~~g~tpL~~A~~~~~~~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~ 157 (480)
T PHA03100 80 YNLTDVKEIVKLLLEYGANV--NAPDNNGITPLLYAISKKSNSYSIVEYLLDNGANVNIKNSDGENLLHLYLESNKIDLK 157 (480)
T ss_pred HHhhchHHHHHHHHHCCCCC--CCCCCCCCchhhHHHhcccChHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCChHH
Confidence 33444444444445544443 566778889999999 899999999999999999988889999999999998 899
Q ss_pred HHHHHHHcCCCCCCCCCCCCcHHHHHHHcCChHHHHHHHhcCCCCCccc--c------cchhhHHHhcCC--HHHHHHHH
Q 003425 587 IMTFLIQKGVDINLKDNFGNTPLLEAIKYGNDGAASLLVKEGASLNVEE--A------GSFLCTAVARGD--SDLLKRVL 656 (821)
Q Consensus 587 ~v~~Ll~~g~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~--~------~t~l~~A~~~~~--~~~v~~Ll 656 (821)
++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++..+ + .||+|.|+..|+ .+++++|+
T Consensus 158 iv~~Ll~~g~din~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll 237 (480)
T PHA03100 158 ILKLLIDKGVDINAKNRYGYTPLHIAVEKGNIDVIKFLLDNGADINAGDIETLLFTIFETPLHIAACYNEITLEVVNYLL 237 (480)
T ss_pred HHHHHHHCCCCcccccCCCCCHHHHHHHhCCHHHHHHHHHcCCCccCCCCCCCcHHHHHhHHHHHHHhCcCcHHHHHHHH
Confidence 9999999999999888889999999999999999999999998887653 4 788999999998 89999999
Q ss_pred HCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccccccc
Q 003425 657 SNGIDPNTRDYDLRTPLHVAASEGLYLMAKLLVEAGASVFPKDRWGNTPLDEGRMCGNKNLIKLLEDAKSTQLL 730 (821)
Q Consensus 657 ~~g~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~i~~~Ll~~~a~~~~ 730 (821)
++|+++|.+|..|.||||+|+..|+.+++++|+++|+|++.+|..|.||+++|+..++.+++++|+++|++...
T Consensus 238 ~~g~din~~d~~g~TpL~~A~~~~~~~iv~~Ll~~gad~n~~d~~g~tpl~~A~~~~~~~iv~~Ll~~g~~i~~ 311 (480)
T PHA03100 238 SYGVPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPNLVNKYGDTPLHIAILNNNKEIFKLLLNNGPSIKT 311 (480)
T ss_pred HcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHhCCHHHHHHHHhcCCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999887654
No 16
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.97 E-value=6.8e-31 Score=297.15 Aligned_cols=239 Identities=23% Similarity=0.269 Sum_probs=219.9
Q ss_pred chHHHHHHHhcCCcchhhhhhhcccccccccchhhhHhhhHHH-----HhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHH
Q 003425 503 DGRKVLTNLLQGKESDLRLKQLQSDITFHISKHEAELALKVNS-----AAYHGDLYQLEGLIRAGADPNRTDYDGRSPLH 577 (821)
Q Consensus 503 ~~~~~l~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~-----A~~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~ 577 (821)
.....+..+...+..+.....++++.+ ++..+..+.||||. |+..|+.++++.|++.|++++..|..|.||||
T Consensus 34 ~~~t~L~~A~~~~~~~ivk~Ll~~g~~--~~~~~~~~~t~L~~~~~~~a~~~~~~~iv~~Ll~~ga~i~~~d~~g~tpL~ 111 (480)
T PHA03100 34 KPVLPLYLAKEARNIDVVKILLDNGAD--INSSTKNNSTPLHYLSNIKYNLTDVKEIVKLLLEYGANVNAPDNNGITPLL 111 (480)
T ss_pred ccchhhhhhhccCCHHHHHHHHHcCCC--CCCccccCcCHHHHHHHHHHHhhchHHHHHHHHHCCCCCCCCCCCCCchhh
Confidence 344566777777777777777766654 44566778999999 99999999999999999999999999999999
Q ss_pred HHH--HcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcC--ChHHHHHHHhcCCCCCcc--cccchhhHHHhcCCHHH
Q 003425 578 LAA--SRGYEEIMTFLIQKGVDINLKDNFGNTPLLEAIKYG--NDGAASLLVKEGASLNVE--EAGSFLCTAVARGDSDL 651 (821)
Q Consensus 578 ~A~--~~g~~~~v~~Ll~~g~~~~~~~~~g~tpL~~A~~~~--~~~~v~~Ll~~~~~~~~~--~~~t~l~~A~~~~~~~~ 651 (821)
+|+ ..|+.+++++|+++|++++..+..|.||||+|+..| +.+++++|+++|++++.. .|.||||.|+..|+.++
T Consensus 112 ~A~~~~~~~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~iv~~Ll~~g~din~~d~~g~tpL~~A~~~~~~~i 191 (480)
T PHA03100 112 YAISKKSNSYSIVEYLLDNGANVNIKNSDGENLLHLYLESNKIDLKILKLLIDKGVDINAKNRYGYTPLHIAVEKGNIDV 191 (480)
T ss_pred HHHhcccChHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCChHHHHHHHHHCCCCcccccCCCCCHHHHHHHhCCHHH
Confidence 999 999999999999999999999999999999999999 999999999999998765 48899999999999999
Q ss_pred HHHHHHCCCCCCCCCCCC------CcHHHHHHHcCc--HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHh
Q 003425 652 LKRVLSNGIDPNTRDYDL------RTPLHVAASEGL--YLMAKLLVEAGASVFPKDRWGNTPLDEGRMCGNKNLIKLLED 723 (821)
Q Consensus 652 v~~Ll~~g~~~~~~d~~g------~T~Lh~A~~~g~--~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~i~~~Ll~ 723 (821)
+++|+++|++++..+..| .||||.|+..|+ .+++++|+++|++++.+|..|.||||+|+..|+.+++++|++
T Consensus 192 v~~Ll~~ga~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll~~g~din~~d~~g~TpL~~A~~~~~~~iv~~Ll~ 271 (480)
T PHA03100 192 IKFLLDNGADINAGDIETLLFTIFETPLHIAACYNEITLEVVNYLLSYGVPINIKDVYGFTPLHYAVYNNNPEFVKYLLD 271 (480)
T ss_pred HHHHHHcCCCccCCCCCCCcHHHHHhHHHHHHHhCcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 999999999999999999 999999999999 999999999999999999999999999999999999999999
Q ss_pred ccccccccCCCCCCcccccc
Q 003425 724 AKSTQLLEFPHGFQDTADKR 743 (821)
Q Consensus 724 ~~a~~~~~~~~~~~~~~~~~ 743 (821)
+|++++..+..|.++...+.
T Consensus 272 ~gad~n~~d~~g~tpl~~A~ 291 (480)
T PHA03100 272 LGANPNLVNKYGDTPLHIAI 291 (480)
T ss_pred cCCCCCccCCCCCcHHHHHH
Confidence 99999999999999876443
No 17
>PHA02946 ankyin-like protein; Provisional
Probab=99.97 E-value=2e-30 Score=284.66 Aligned_cols=206 Identities=21% Similarity=0.269 Sum_probs=179.8
Q ss_pred hhhhhhcccccccccchhhhHhhhHHHHhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcC--CHHHHHHHHHcCC
Q 003425 519 LRLKQLQSDITFHISKHEAELALKVNSAAYHGDLYQLEGLIRAGADPNRTDYDGRSPLHLAASRG--YEEIMTFLIQKGV 596 (821)
Q Consensus 519 ~~~~~l~~~~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~g--~~~~v~~Ll~~g~ 596 (821)
.....+.++. +++..+.+|.||||+||..|+.++++.|+++|+++|.+|.+|.||||+|+..+ ..+++++|+++|+
T Consensus 54 iv~~Ll~~Ga--dvn~~d~~G~TpLh~Aa~~g~~eiv~lLL~~GAdin~~d~~g~TpLh~A~~~~~~~~e~v~lLl~~Ga 131 (446)
T PHA02946 54 FVEELLHRGY--SPNETDDDGNYPLHIASKINNNRIVAMLLTHGADPNACDKQHKTPLYYLSGTDDEVIERINLLVQYGA 131 (446)
T ss_pred HHHHHHHCcC--CCCccCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCchHHHHHHHHHcCC
Confidence 3344444443 45677888999999999999999999999999999999999999999998866 4789999999999
Q ss_pred CCCC-CCCCCCcHHHHHHHcCChHHHHHHHhcCCCCCcc--cccchhhHHHhcCC--HHHHHHHHHCCCCCCCCCCCCCc
Q 003425 597 DINL-KDNFGNTPLLEAIKYGNDGAASLLVKEGASLNVE--EAGSFLCTAVARGD--SDLLKRVLSNGIDPNTRDYDLRT 671 (821)
Q Consensus 597 ~~~~-~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~--~~~t~l~~A~~~~~--~~~v~~Ll~~g~~~~~~d~~g~T 671 (821)
+++. .|..|.|||| |+..++.+++++|++.|++++.. .|.||||.|+..++ .+++++|+++|++++.+|.+|+|
T Consensus 132 din~~~d~~g~tpL~-aa~~~~~~vv~~Ll~~gad~~~~d~~G~t~Lh~A~~~~~~~~~~v~~Ll~~Gadin~~d~~G~T 210 (446)
T PHA02946 132 KINNSVDEEGCGPLL-ACTDPSERVFKKIMSIGFEARIVDKFGKNHIHRHLMSDNPKASTISWMMKLGISPSKPDHDGNT 210 (446)
T ss_pred CcccccCCCCCcHHH-HHHCCChHHHHHHHhccccccccCCCCCCHHHHHHHhcCCCHHHHHHHHHcCCCCcccCCCCCC
Confidence 9995 6889999997 66779999999999999988765 48899999887654 68999999999999999999999
Q ss_pred HHHHHHHcC--cHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCC-HHHHHHHHhccccc
Q 003425 672 PLHVAASEG--LYLMAKLLVEAGASVFPKDRWGNTPLDEGRMCGN-KNLIKLLEDAKSTQ 728 (821)
Q Consensus 672 ~Lh~A~~~g--~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~-~~i~~~Ll~~~a~~ 728 (821)
|||+|+..| +.+++++|++ |+++|.+|..|.||||+|+..++ .+++++|+++|+..
T Consensus 211 pLH~Aa~~~~~~~~iv~lLl~-gadin~~d~~G~TpLh~A~~~~~~~~~~~~Ll~~g~~~ 269 (446)
T PHA02946 211 PLHIVCSKTVKNVDIINLLLP-STDVNKQNKFGDSPLTLLIKTLSPAHLINKLLSTSNVI 269 (446)
T ss_pred HHHHHHHcCCCcHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHhCChHHHHHHHHhCCCCC
Confidence 999999876 7899999985 89999999999999999999988 58999999998754
No 18
>PHA03095 ankyrin-like protein; Provisional
Probab=99.97 E-value=3.1e-30 Score=291.13 Aligned_cols=237 Identities=25% Similarity=0.310 Sum_probs=200.4
Q ss_pred hHHHHHHHhcCC---cchhhhhhhcccccccccchhhhHhhhHHHHhhcC-CHHHHHHHHHcCCCCCCCCCCCCcHHHHH
Q 003425 504 GRKVLTNLLQGK---ESDLRLKQLQSDITFHISKHEAELALKVNSAAYHG-DLYQLEGLIRAGADPNRTDYDGRSPLHLA 579 (821)
Q Consensus 504 ~~~~l~~~l~~~---~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~A~~~g-~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A 579 (821)
+...++.++... ..+.....++.+.+ ++..+..|.||||.|+..| +.++++.|++.|+++|.+|..|.||||+|
T Consensus 47 g~t~Lh~a~~~~~~~~~~iv~~Ll~~Gad--in~~~~~g~TpLh~A~~~~~~~~iv~lLl~~ga~in~~~~~g~tpLh~a 124 (471)
T PHA03095 47 GKTPLHLYLHYSSEKVKDIVRLLLEAGAD--VNAPERCGFTPLHLYLYNATTLDVIKLLIKAGADVNAKDKVGRTPLHVY 124 (471)
T ss_pred CCCHHHHHHHhcCCChHHHHHHHHHCCCC--CCCCCCCCCCHHHHHHHcCCcHHHHHHHHHcCCCCCCCCCCCCCHHHHH
Confidence 344555555544 33344445555444 4455668999999999999 59999999999999999999999999999
Q ss_pred H--HcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcC--ChHHHHHHHhcCCCCCcc--cccchhhHHHhc--CCHHH
Q 003425 580 A--SRGYEEIMTFLIQKGVDINLKDNFGNTPLLEAIKYG--NDGAASLLVKEGASLNVE--EAGSFLCTAVAR--GDSDL 651 (821)
Q Consensus 580 ~--~~g~~~~v~~Ll~~g~~~~~~~~~g~tpL~~A~~~~--~~~~v~~Ll~~~~~~~~~--~~~t~l~~A~~~--~~~~~ 651 (821)
+ ..++.+++++|+++|++++.+|..|.||||+|+..+ +.+++++|+++|++++.. .|.||||.|+.. ++.++
T Consensus 125 ~~~~~~~~~iv~~Ll~~gad~~~~d~~g~tpL~~a~~~~~~~~~iv~~Ll~~g~~~~~~d~~g~t~Lh~~~~~~~~~~~i 204 (471)
T PHA03095 125 LSGFNINPKVIRLLLRKGADVNALDLYGMTPLAVLLKSRNANVELLRLLIDAGADVYAVDDRFRSLLHHHLQSFKPRARI 204 (471)
T ss_pred hhCCcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHHCCCcHHH
Confidence 9 556789999999999999999999999999988866 578899999999888765 478999998875 77899
Q ss_pred HHHHHHCCCCCCCCCCCCCcHHHHHHHcCcH--HHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcccccc
Q 003425 652 LKRVLSNGIDPNTRDYDLRTPLHVAASEGLY--LMAKLLVEAGASVFPKDRWGNTPLDEGRMCGNKNLIKLLEDAKSTQL 729 (821)
Q Consensus 652 v~~Ll~~g~~~~~~d~~g~T~Lh~A~~~g~~--~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~i~~~Ll~~~a~~~ 729 (821)
++.|+++|++++.+|..|+||||+|+..|+. .+++.|+++|+++|.+|..|+||||+|+..|+.+++++|+++|++++
T Consensus 205 ~~~Ll~~g~~~~~~d~~g~tpLh~Aa~~~~~~~~~v~~ll~~g~din~~d~~g~TpLh~A~~~~~~~~v~~LL~~gad~n 284 (471)
T PHA03095 205 VRELIRAGCDPAATDMLGNTPLHSMATGSSCKRSLVLPLLIAGISINARNRYGQTPLHYAAVFNNPRACRRLIALGADIN 284 (471)
T ss_pred HHHHHHcCCCCcccCCCCCCHHHHHHhcCCchHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCc
Confidence 9999999999999999999999999999874 68899999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCccccc
Q 003425 730 LEFPHGFQDTADK 742 (821)
Q Consensus 730 ~~~~~~~~~~~~~ 742 (821)
..+..|.+|...+
T Consensus 285 ~~~~~g~tpl~~A 297 (471)
T PHA03095 285 AVSSDGNTPLSLM 297 (471)
T ss_pred ccCCCCCCHHHHH
Confidence 9999999987644
No 19
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.97 E-value=4.9e-31 Score=277.63 Aligned_cols=201 Identities=29% Similarity=0.352 Sum_probs=182.5
Q ss_pred HhcCCcchhhhhhhcccccccccchhhhHhhhHHHHhhcCCHHHHHHHHHcCCCCCCCC-CCCCcHHHHHHHcCCHHHHH
Q 003425 511 LLQGKESDLRLKQLQSDITFHISKHEAELALKVNSAAYHGDLYQLEGLIRAGADPNRTD-YDGRSPLHLAASRGYEEIMT 589 (821)
Q Consensus 511 ~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~n~~d-~~g~t~L~~A~~~g~~~~v~ 589 (821)
+.+.++.+...+..++. ...++..|.+|.++||+||.+++++++++|+++|+|+|..+ .-+.||||+||++|+..+|+
T Consensus 51 A~q~G~l~~v~~lve~~-g~~v~~~D~~g~tlLHWAAiNNrl~v~r~li~~gadvn~~gG~l~stPLHWAar~G~~~vv~ 129 (600)
T KOG0509|consen 51 ATQYGELETVKELVESE-GESVNNPDREGVTLLHWAAINNRLDVARYLISHGADVNAIGGVLGSTPLHWAARNGHISVVD 129 (600)
T ss_pred HhhcchHHHHHHHHhhc-CcCCCCCCcCCccceeHHHHcCcHHHHHHHHHcCCCccccCCCCCCCcchHHHHcCcHHHHH
Confidence 33444444444555554 44567778899999999999999999999999999999998 67899999999999999999
Q ss_pred HHHHcCCCCCCCCCCCCcHHHHHHHcCChHHHHHHHhcCCCCCccc--ccchhhHHHhcCCHHHHHHHHHCCCCCCCCC-
Q 003425 590 FLIQKGVDINLKDNFGNTPLLEAIKYGNDGAASLLVKEGASLNVEE--AGSFLCTAVARGDSDLLKRVLSNGIDPNTRD- 666 (821)
Q Consensus 590 ~Ll~~g~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~--~~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~d- 666 (821)
+|+++||||+.+|.+|.+|||.|+..|+...+.+|+.+|++++.+| |+||||+|+.+|+...+..|++-|++++..|
T Consensus 130 lLlqhGAdpt~~D~~G~~~lHla~~~~~~~~vayll~~~~d~d~~D~~grTpLmwAaykg~~~~v~~LL~f~a~~~~~d~ 209 (600)
T KOG0509|consen 130 LLLQHGADPTLKDKQGLTPLHLAAQFGHTALVAYLLSKGADIDLRDNNGRTPLMWAAYKGFALFVRRLLKFGASLLLTDD 209 (600)
T ss_pred HHHHcCCCCceecCCCCcHHHHHHHhCchHHHHHHHHhcccCCCcCCCCCCHHHHHHHhcccHHHHHHHHhccccccccc
Confidence 9999999999999999999999999999999999999999988764 8999999999999998999999999999888
Q ss_pred CCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc
Q 003425 667 YDLRTPLHVAASEGLYLMAKLLVEAGASVFPKDRWGNTPLDEGRMC 712 (821)
Q Consensus 667 ~~g~T~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~ 712 (821)
..|+||||+|+..|+..++.+|++.|++.+..|.+|.||+++|...
T Consensus 210 ~~g~TpLHwa~~~gN~~~v~Ll~~g~~~~d~~~~~g~tp~~LA~~~ 255 (600)
T KOG0509|consen 210 NHGNTPLHWAVVGGNLTAVKLLLEGGADLDKTNTNGKTPFDLAQER 255 (600)
T ss_pred ccCCchHHHHHhcCCcceEehhhhcCCcccccccCCCCHHHHHHHh
Confidence 8999999999999999999988888899999999999999999887
No 20
>PHA02946 ankyin-like protein; Provisional
Probab=99.97 E-value=6.8e-30 Score=280.54 Aligned_cols=202 Identities=25% Similarity=0.236 Sum_probs=184.8
Q ss_pred HhhhHHHHh--hcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcC
Q 003425 539 LALKVNSAA--YHGDLYQLEGLIRAGADPNRTDYDGRSPLHLAASRGYEEIMTFLIQKGVDINLKDNFGNTPLLEAIKYG 616 (821)
Q Consensus 539 ~~~~L~~A~--~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~tpL~~A~~~~ 616 (821)
+.++||.++ ..++.++++.|+++|+++|.+|.+|.||||+||..|+.+++++|+++|+++|.+|..|.||||+|+..+
T Consensus 37 ~~~~Lh~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~G~TpLh~Aa~~g~~eiv~lLL~~GAdin~~d~~g~TpLh~A~~~~ 116 (446)
T PHA02946 37 NYHILHAYCGIKGLDERFVEELLHRGYSPNETDDDGNYPLHIASKINNNRIVAMLLTHGADPNACDKQHKTPLYYLSGTD 116 (446)
T ss_pred CChHHHHHHHhcCCCHHHHHHHHHCcCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcC
Confidence 368888776 456789999999999999999999999999999999999999999999999999999999999998876
Q ss_pred C--hHHHHHHHhcCCCCCc---ccccchhhHHHhcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcC--cHHHHHHHH
Q 003425 617 N--DGAASLLVKEGASLNV---EEAGSFLCTAVARGDSDLLKRVLSNGIDPNTRDYDLRTPLHVAASEG--LYLMAKLLV 689 (821)
Q Consensus 617 ~--~~~v~~Ll~~~~~~~~---~~~~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~T~Lh~A~~~g--~~~~v~~Ll 689 (821)
+ .+++++|+++|++++. .+|.|||| |+..++.+++++|+++|++++.+|..|+||||.|+..+ +.+++++|+
T Consensus 117 ~~~~e~v~lLl~~Gadin~~~d~~g~tpL~-aa~~~~~~vv~~Ll~~gad~~~~d~~G~t~Lh~A~~~~~~~~~~v~~Ll 195 (446)
T PHA02946 117 DEVIERINLLVQYGAKINNSVDEEGCGPLL-ACTDPSERVFKKIMSIGFEARIVDKFGKNHIHRHLMSDNPKASTISWMM 195 (446)
T ss_pred CchHHHHHHHHHcCCCcccccCCCCCcHHH-HHHCCChHHHHHHHhccccccccCCCCCCHHHHHHHhcCCCHHHHHHHH
Confidence 4 7899999999999984 45889997 67789999999999999999999999999999998765 468999999
Q ss_pred HcCCCCCCCCCCCCCHHHHHHHcC--CHHHHHHHHhccccccccCCCCCCccccc
Q 003425 690 EAGASVFPKDRWGNTPLDEGRMCG--NKNLIKLLEDAKSTQLLEFPHGFQDTADK 742 (821)
Q Consensus 690 ~~ga~~~~~d~~g~t~l~~A~~~~--~~~i~~~Ll~~~a~~~~~~~~~~~~~~~~ 742 (821)
++|++++.+|.+|+||||+|+..| +.+++++|++ |++.+.++..|.+|.+..
T Consensus 196 ~~Gadin~~d~~G~TpLH~Aa~~~~~~~~iv~lLl~-gadin~~d~~G~TpLh~A 249 (446)
T PHA02946 196 KLGISPSKPDHDGNTPLHIVCSKTVKNVDIINLLLP-STDVNKQNKFGDSPLTLL 249 (446)
T ss_pred HcCCCCcccCCCCCCHHHHHHHcCCCcHHHHHHHHc-CCCCCCCCCCCCCHHHHH
Confidence 999999999999999999999986 8899999995 899999999999998743
No 21
>PHA02798 ankyrin-like protein; Provisional
Probab=99.97 E-value=8.5e-30 Score=286.57 Aligned_cols=212 Identities=24% Similarity=0.237 Sum_probs=185.2
Q ss_pred chhhhhhhcccccccccchhhhHhhhHHHHhhc-----CCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcC---CHHHH
Q 003425 517 SDLRLKQLQSDITFHISKHEAELALKVNSAAYH-----GDLYQLEGLIRAGADPNRTDYDGRSPLHLAASRG---YEEIM 588 (821)
Q Consensus 517 ~~~~~~~l~~~~~~~~~~~~~~~~~~L~~A~~~-----g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~g---~~~~v 588 (821)
.+.....++++. +++..+..|.||||.|+.+ +..++++.|+++|+|+|.+|.+|.||||+|+.++ +.+++
T Consensus 51 ~~iv~~Ll~~Ga--dvn~~d~~g~TpL~~~~~n~~~~~~~~~iv~~Ll~~GadiN~~d~~G~TpLh~a~~~~~~~~~~iv 128 (489)
T PHA02798 51 TDIVKLFINLGA--NVNGLDNEYSTPLCTILSNIKDYKHMLDIVKILIENGADINKKNSDGETPLYCLLSNGYINNLEIL 128 (489)
T ss_pred HHHHHHHHHCCC--CCCCCCCCCCChHHHHHHhHHhHHhHHHHHHHHHHCCCCCCCCCCCcCcHHHHHHHcCCcChHHHH
Confidence 344555566655 4556778999999999865 7799999999999999999999999999999976 78999
Q ss_pred HHHHHcCCCCCCCCCCCCcHHHHHHHcCC---hHHHHHHHhcCCCCCcc---cccchhhHHHhc----CCHHHHHHHHHC
Q 003425 589 TFLIQKGVDINLKDNFGNTPLLEAIKYGN---DGAASLLVKEGASLNVE---EAGSFLCTAVAR----GDSDLLKRVLSN 658 (821)
Q Consensus 589 ~~Ll~~g~~~~~~~~~g~tpL~~A~~~~~---~~~v~~Ll~~~~~~~~~---~~~t~l~~A~~~----~~~~~v~~Ll~~ 658 (821)
++|+++|++++.+|..|.||||+|+..++ .+++++|+++|++++.. .+.||+|.++.. ++.+++++|+++
T Consensus 129 ~~Ll~~Gadvn~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~gadin~~~~~~~~t~Lh~~~~~~~~~~~~~ivk~Li~~ 208 (489)
T PHA02798 129 LFMIENGADTTLLDKDGFTMLQVYLQSNHHIDIEIIKLLLEKGVDINTHNNKEKYDTLHCYFKYNIDRIDADILKLFVDN 208 (489)
T ss_pred HHHHHcCCCccccCCCCCcHHHHHHHcCCcchHHHHHHHHHhCCCcccccCcCCCcHHHHHHHhccccCCHHHHHHHHHC
Confidence 99999999999999999999999999998 99999999999999865 367999988764 478889988888
Q ss_pred CCCC---------------------------------------CCCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCC
Q 003425 659 GIDP---------------------------------------NTRDYDLRTPLHVAASEGLYLMAKLLVEAGASVFPKD 699 (821)
Q Consensus 659 g~~~---------------------------------------~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d 699 (821)
|+++ |.+|..|.||||+|+..|+.+++++|+++|||++.+|
T Consensus 209 Ga~i~~~~~~~~~~~~~~l~~l~~~~~~~~~~i~~~l~~~~dvN~~d~~G~TPL~~A~~~~~~~~v~~LL~~GAdin~~d 288 (489)
T PHA02798 209 GFIINKENKSHKKKFMEYLNSLLYDNKRFKKNILDFIFSYIDINQVDELGFNPLYYSVSHNNRKIFEYLLQLGGDINIIT 288 (489)
T ss_pred CCCcccCCccccchHHHHHHHHHhhcccchHHHHHHHHhcCCCCCcCcCCccHHHHHHHcCcHHHHHHHHHcCCcccccC
Confidence 7644 4566779999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHcCCHHHHHHHHhccccccc
Q 003425 700 RWGNTPLDEGRMCGNKNLIKLLEDAKSTQLL 730 (821)
Q Consensus 700 ~~g~t~l~~A~~~~~~~i~~~Ll~~~a~~~~ 730 (821)
..|+||||+|+..++.++++.|+++++++..
T Consensus 289 ~~G~TpL~~A~~~~~~~iv~~lL~~~~~~~~ 319 (489)
T PHA02798 289 ELGNTCLFTAFENESKFIFNSILNKKPNKNT 319 (489)
T ss_pred CCCCcHHHHHHHcCcHHHHHHHHccCCCHHH
Confidence 9999999999999999999999999988764
No 22
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.97 E-value=8.2e-30 Score=286.86 Aligned_cols=225 Identities=18% Similarity=0.157 Sum_probs=190.1
Q ss_pred hhhhhhcccccccccchhhhHhhhHHHHhhcCC--HHHHHHHHHcCCCCCCCCCCCCcHHHHH-----------------
Q 003425 519 LRLKQLQSDITFHISKHEAELALKVNSAAYHGD--LYQLEGLIRAGADPNRTDYDGRSPLHLA----------------- 579 (821)
Q Consensus 519 ~~~~~l~~~~~~~~~~~~~~~~~~L~~A~~~g~--~~~v~~Ll~~g~~~n~~d~~g~t~L~~A----------------- 579 (821)
....+++++ .+++..+..|.||||.|+..|+ .++|+.|+++|+|+|.+|..|.||||+|
T Consensus 194 IVklLLe~G--ADVN~kD~~G~TPLH~Aa~~g~~~~eIVklLLe~GADVN~kD~~G~TPLh~Ai~~a~n~~~EIvkiLie 271 (764)
T PHA02716 194 ILEWLCNNG--VNVNLQNNHLITPLHTYLITGNVCASVIKKIIELGGDMDMKCVNGMSPIMTYIINIDNINPEITNIYIE 271 (764)
T ss_pred HHHHHHHcC--CCCCCCCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhhhccCHHHHHHHHH
Confidence 333444444 3456678899999999999995 5899999999999999999999999975
Q ss_pred --------------------HHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHH--cCChHHHHHHHhcCCCCCccc--
Q 003425 580 --------------------ASRGYEEIMTFLIQKGVDINLKDNFGNTPLLEAIK--YGNDGAASLLVKEGASLNVEE-- 635 (821)
Q Consensus 580 --------------------~~~g~~~~v~~Ll~~g~~~~~~~~~g~tpL~~A~~--~~~~~~v~~Ll~~~~~~~~~~-- 635 (821)
+..|+.+++++|+++|++++.+|..|+||||+|+. .++.+++++|+++|++++..+
T Consensus 272 ~~d~n~~~~~~~~L~~~i~AA~~g~leiVklLLe~GAdIN~kD~~G~TPLH~Aaa~~~~~~eIVklLLe~GADIN~kD~~ 351 (764)
T PHA02716 272 SLDGNKVKNIPMILHSYITLARNIDISVVYSFLQPGVKLHYKDSAGRTCLHQYILRHNISTDIIKLLHEYGNDLNEPDNI 351 (764)
T ss_pred hccccccccchhhhHHHHHHHHcCCHHHHHHHHhCCCceeccCCCCCCHHHHHHHHhCCCchHHHHHHHcCCCCccCCCC
Confidence 44578899999999999999999999999999874 468899999999999998764
Q ss_pred ccchhhHHHh--------------cCCHHHHHHHHHCCCCCCCCCCCCCcHHHHH----HHcCcHHHHHHHHHcCC----
Q 003425 636 AGSFLCTAVA--------------RGDSDLLKRVLSNGIDPNTRDYDLRTPLHVA----ASEGLYLMAKLLVEAGA---- 693 (821)
Q Consensus 636 ~~t~l~~A~~--------------~~~~~~v~~Ll~~g~~~~~~d~~g~T~Lh~A----~~~g~~~~v~~Ll~~ga---- 693 (821)
|.||||.|+. .++.+++++|+++|++++.+|..|.||||.| ...++.+++++|++.|+
T Consensus 352 G~TPLH~A~~~lav~~~ld~~~~~~~~~eVVklLL~~GADIn~kn~~G~TPLh~y~~~a~n~~~~dIvklLis~~~~~~~ 431 (764)
T PHA02716 352 GNTVLHTYLSMLSVVNILDPETDNDIRLDVIQCLISLGADITAVNCLGYTPLTSYICTAQNYMYYDIIDCLISDKVLNMV 431 (764)
T ss_pred CCCHHHHHHHhhhhhccccccccccChHHHHHHHHHCCCCCCCcCCCCCChHHHHHHHHHhcChHHHHHHHHhCcchhhh
Confidence 8899999875 3688999999999999999999999999942 23467888888887643
Q ss_pred ---------------------------------------------------------CCCCCCCCCCCHHHHHHHcCCHH
Q 003425 694 ---------------------------------------------------------SVFPKDRWGNTPLDEGRMCGNKN 716 (821)
Q Consensus 694 ---------------------------------------------------------~~~~~d~~g~t~l~~A~~~~~~~ 716 (821)
++|..|..|+||||+|+..|+.+
T Consensus 432 ~~~~~q~ll~~~d~~~~~lhh~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~ii~~~nvN~~D~~G~TPLh~Aa~~g~~~ 511 (764)
T PHA02716 432 KHRILQDLLIRVDDTPCIIHHIIAKYNIPTDLYTDEYEPYDSTKIHDVYHCAIIERYNNAVCETSGMTPLHVSIISHTNA 511 (764)
T ss_pred hhhhhhhhhhccCcchhhHHHHHHhcCcchhhhhhhhhhccccccchhhHHHHHhhccccccCCCCCCHHHHHHHcCCcc
Confidence 23455778999999999999874
Q ss_pred -----HHHHHHhccccccccCCCCCCccccccCC
Q 003425 717 -----LIKLLEDAKSTQLLEFPHGFQDTADKRNP 745 (821)
Q Consensus 717 -----i~~~Ll~~~a~~~~~~~~~~~~~~~~~~~ 745 (821)
++++|+++|++.+.++..|.+|.+.+...
T Consensus 512 ~v~~e~~k~LL~~GADIN~~d~~G~TPLh~A~~~ 545 (764)
T PHA02716 512 NIVMDSFVYLLSIQYNINIPTKNGVTPLMLTMRN 545 (764)
T ss_pred chhHHHHHHHHhCCCCCcccCCCCCCHHHHHHHc
Confidence 55999999999999999999998865543
No 23
>KOG3713 consensus Voltage-gated K+ channel KCNB/KCNC [Inorganic ion transport and metabolism]
Probab=99.97 E-value=4.6e-30 Score=264.04 Aligned_cols=236 Identities=19% Similarity=0.250 Sum_probs=182.2
Q ss_pred cccccccccCCcCeEEcCCChh-HHHHHHHHHHHHHHHhhhcceee--ee-----------------ecCCCcCeehhHH
Q 003425 51 QSVLSGFRHFSRNLVFHPDNRW-YRAWTKFILIWAVYSSIFTPVEF--GF-----------------FRGLSKNLYVLDI 110 (821)
Q Consensus 51 ~~~~~~~~~~~~~~~~~P~s~~-~~~w~~~~~~~~~~~~~~~p~~~--~f-----------------~~~~~~~~~~~~~ 110 (821)
...++++|+++|.++.+|+|+. .++...+-+++++.+.+..-+.. .| .......+.++|.
T Consensus 168 ~~~~~~~r~rlW~~~E~P~SS~~Ak~fa~~Sv~FVlvSiv~lcL~T~pe~q~~~~~~~~~~~~~~~~~~~~~p~l~~vE~ 247 (477)
T KOG3713|consen 168 GGRCGRLRRRLWALLENPGSSLAAKVFAVLSVLFVLVSIVGLCLGTLPEFQVPDKQGEGLLVNVEKIESEPHPILTYVET 247 (477)
T ss_pred CCChhhHHHHHHHHhcCCCcchHHHHHHHHHHHHHHHHHHHHHHcCCHhhhchhhccccccccccccCCCCCCchHHHHH
Confidence 3455668999999999999654 56666655555555544333321 11 1112345789999
Q ss_pred HHHHHHHHhHhheeeEEEEeCCceEEeeccHHHHHHHhhhhh-HHHHHhhhhHHHHHhhc--C---------chhHHHHH
Q 003425 111 VGQIAFLFDIVLQFCLAYRDSQTYRLICKRTPIALRYLRSSF-IIDLFSCMPWDLIYKAS--G---------RKEAVRYL 178 (821)
Q Consensus 111 ~~~~~f~~Di~l~f~t~y~~~~~~~~v~~~~~I~~~Ylk~~f-~iDlis~lP~~~~~~~~--~---------~~~~~~~l 178 (821)
+|.+||++|+++|| +..|++ .+|+|+.. +||++|++||++-.... . ...+++++
T Consensus 248 vCi~WFT~E~llR~------------~~~P~k--~~F~k~pLNIIDllAIlPFYielll~~~~~~~~~~l~~~~~vvrvl 313 (477)
T KOG3713|consen 248 VCIAWFTFEYLLRF------------LVAPNK--LEFFKSPLNIIDLLAILPFYLELLLTLFGGESLKELENAGLVVRVL 313 (477)
T ss_pred HHHHHHHHHHHHHH------------HcCchH--HHHHhCcchHHHHHHHHHHHHHHHHHHhccchHHHHhhhhhhHHHH
Confidence 99999999999955 677888 99999975 99999999998764322 1 11457888
Q ss_pred HHHHHHHHHHHHHHHHhhhhhHh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCceeccccCCCCCcccc
Q 003425 179 LWIRLYRVRKVSQFFHKMEKDIR-INYMFSRIVKLIAVELYCSHIAACIFYYLATTLPPEQEGYTWIGSLKMGDYSYADF 257 (821)
Q Consensus 179 ~llrl~rl~r~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~h~~ac~~~~i~~~~~~~~~~~~w~~~~~~~~~~~~~~ 257 (821)
|++|++|++|+.|+...++.... ++.....+..+++++.+.+-+||.+.|+++...+...
T Consensus 314 R~lRI~RI~KLaRhS~GLr~lg~Tlr~S~~ElglLllfL~~GI~iFStlvY~~Ek~~~~~~------------------- 374 (477)
T KOG3713|consen 314 RVLRILRIFKLARHSTGLRTLGLTLRRSYRELGLLLLFLAVGIVIFSTLVYFAEKDEPDTK------------------- 374 (477)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCC-------------------
Confidence 88888888888888888876554 4556667788888888888999999999886543322
Q ss_pred cccchHHHHHHHHHHHHHHhhccccCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchh
Q 003425 258 REIGFWKSYITSMYASVVTMTTVGYGDVHAVNLREMVFIMIYVSFDMILGAYLIGNMTALIVKGSKT 324 (821)
Q Consensus 258 ~~~~~~~~Y~~s~yw~~~t~tTvGyGdi~p~t~~e~~~~~~~~i~g~~~~a~~i~~i~~~~~~~~~~ 324 (821)
|.+.+.|+||+++|||||||||++|.|+.|++++..+++.|+++.|++|..|.+.++...+.
T Consensus 375 -----FtSIPa~~WWaiVTMTTVGYGDm~P~T~~Gklvas~cil~GVLvlAlPItiIv~nF~~~y~~ 436 (477)
T KOG3713|consen 375 -----FTSIPAGFWWAVVTMTTVGYGDMVPVTVLGKLVASLCILCGVLVLALPITIIVNNFSMYYSE 436 (477)
T ss_pred -----CccccchhheeeEEEeeecccCccccccchHHHHHHHHHHhHHHhhcchHhHhhhHHHHHHH
Confidence 45788999999999999999999999999999999999999999999999999988774433
No 24
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.96 E-value=6.3e-29 Score=279.14 Aligned_cols=215 Identities=24% Similarity=0.303 Sum_probs=189.2
Q ss_pred HHHHHhcCCcchhhhhhhcccccccccchhhhHhhhHHHHhhcCCHH---------------------------------
Q 003425 507 VLTNLLQGKESDLRLKQLQSDITFHISKHEAELALKVNSAAYHGDLY--------------------------------- 553 (821)
Q Consensus 507 ~l~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~A~~~g~~~--------------------------------- 553 (821)
.++.+...+..+.....++.+. +++..+..|.||||.||..|+.+
T Consensus 40 PLh~A~~~g~~e~vk~Ll~~ga--dvn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~l~~a~~~~~~ei~ 117 (477)
T PHA02878 40 PLHQAVEARNLDVVKSLLTRGH--NVNQPDHRDLTPLHIICKEPNKLGMKEMIRSINKCSVFYTLVAIKDAFNNRNVEIF 117 (477)
T ss_pred hHHHHHHcCCHHHHHHHHHCCC--CCCCCCCCCCCHHHHHHHCccHhHHHHHHHHHhccccccchhhHHHHHHcCCHHHH
Confidence 4677777777776666776654 45567788999999999876542
Q ss_pred -------------------------------HHHHHHHcCCCCCCCCCC-CCcHHHHHHHcCCHHHHHHHHHcCCCCCCC
Q 003425 554 -------------------------------QLEGLIRAGADPNRTDYD-GRSPLHLAASRGYEEIMTFLIQKGVDINLK 601 (821)
Q Consensus 554 -------------------------------~v~~Ll~~g~~~n~~d~~-g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~ 601 (821)
+++.|++.|+++|..+.. |.||||+||..|+.+++++|+++|++++.+
T Consensus 118 ~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~gadin~~~~~~g~tpLh~A~~~~~~~iv~~Ll~~gad~n~~ 197 (477)
T PHA02878 118 KIILTNRYKNIQTIDLVYIDKKSKDDIIEAEITKLLLSYGADINMKDRHKGNTALHYATENKDQRLTELLLSYGANVNIP 197 (477)
T ss_pred HHHHhCcccCcccCcHHHHhhccchhhHHHHHHHHHHHcCCCCCccCCCCCCCHHHHHHhCCCHHHHHHHHHCCCCCCCc
Confidence 667777889999999988 999999999999999999999999999999
Q ss_pred CCCCCcHHHHHHHcCChHHHHHHHhcCCCCCccc--ccchhhHHHhc-CCHHHHHHHHHCCCCCCCCCC-CCCcHHHHHH
Q 003425 602 DNFGNTPLLEAIKYGNDGAASLLVKEGASLNVEE--AGSFLCTAVAR-GDSDLLKRVLSNGIDPNTRDY-DLRTPLHVAA 677 (821)
Q Consensus 602 ~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~--~~t~l~~A~~~-~~~~~v~~Ll~~g~~~~~~d~-~g~T~Lh~A~ 677 (821)
|..|.||||.|+..|+.+++++|++.|++++..+ |.||||+|+.. ++.+++++|+++|+++|.++. .|.||||+|
T Consensus 198 d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~gadvn~~~~~~g~TpLh~A- 276 (477)
T PHA02878 198 DKTNNSPLHHAVKHYNKPIVHILLENGASTDARDKCGNTPLHISVGYCKDYDILKLLLEHGVDVNAKSYILGLTALHSS- 276 (477)
T ss_pred CCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCCCHHHHH-
Confidence 9999999999999999999999999999998764 89999999976 789999999999999999886 799999999
Q ss_pred HcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC-CHHHHHHHHhcc
Q 003425 678 SEGLYLMAKLLVEAGASVFPKDRWGNTPLDEGRMCG-NKNLIKLLEDAK 725 (821)
Q Consensus 678 ~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~-~~~i~~~Ll~~~ 725 (821)
.++.+++++|+++|||+|..|..|.||||+|+..+ ..+++++|+.+.
T Consensus 277 -~~~~~~v~~Ll~~gadin~~d~~g~TpL~~A~~~~~~~~~~~~li~~~ 324 (477)
T PHA02878 277 -IKSERKLKLLLEYGADINSLNSYKLTPLSSAVKQYLCINIGRILISNI 324 (477)
T ss_pred -ccCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHHcCccchHHHHHHHH
Confidence 57889999999999999999999999999999864 567888887664
No 25
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.96 E-value=3.9e-29 Score=281.46 Aligned_cols=209 Identities=20% Similarity=0.135 Sum_probs=182.8
Q ss_pred ccch-hhhHhhhHHHHhh--cCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCC--HHHHHHHHHcCCCCCCCCCCCC
Q 003425 532 ISKH-EAELALKVNSAAY--HGDLYQLEGLIRAGADPNRTDYDGRSPLHLAASRGY--EEIMTFLIQKGVDINLKDNFGN 606 (821)
Q Consensus 532 ~~~~-~~~~~~~L~~A~~--~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~g~--~~~v~~Ll~~g~~~~~~~~~g~ 606 (821)
++.. +..|.||||.|+. .++.+++++|+++|+++|.+|..|.||||+|+..|+ .+++++|+++|+|+|.+|..|.
T Consensus 169 IN~~~d~~G~TpLH~A~~n~~~~~eIVklLLe~GADVN~kD~~G~TPLH~Aa~~g~~~~eIVklLLe~GADVN~kD~~G~ 248 (764)
T PHA02716 169 LNYVCKKTGYGILHAYLGNMYVDIDILEWLCNNGVNVNLQNNHLITPLHTYLITGNVCASVIKKIIELGGDMDMKCVNGM 248 (764)
T ss_pred cccccCCCCCcHHHHHHHhccCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCCCCCCCCC
Confidence 4444 6789999999865 468999999999999999999999999999999995 5899999999999999999999
Q ss_pred cHHHHHH---HcCChHHHHHHHhcCCCCCcccccchhh---HHHhcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHH--
Q 003425 607 TPLLEAI---KYGNDGAASLLVKEGASLNVEEAGSFLC---TAVARGDSDLLKRVLSNGIDPNTRDYDLRTPLHVAAS-- 678 (821)
Q Consensus 607 tpL~~A~---~~~~~~~v~~Ll~~~~~~~~~~~~t~l~---~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~T~Lh~A~~-- 678 (821)
||||+|+ ..++.++++.|++.+......+...+++ .|+..|+.++++.|+++|++++.+|..|+||||+|+.
T Consensus 249 TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~~~i~AA~~g~leiVklLLe~GAdIN~kD~~G~TPLH~Aaa~~ 328 (764)
T PHA02716 249 SPIMTYIINIDNINPEITNIYIESLDGNKVKNIPMILHSYITLARNIDISVVYSFLQPGVKLHYKDSAGRTCLHQYILRH 328 (764)
T ss_pred CHHHHHHHhhhccCHHHHHHHHHhccccccccchhhhHHHHHHHHcCCHHHHHHHHhCCCceeccCCCCCCHHHHHHHHh
Confidence 9999885 5678999999998754332222233343 4789999999999999999999999999999999875
Q ss_pred cCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHH--------------cCCHHHHHHHHhccccccccCCCCCCccc
Q 003425 679 EGLYLMAKLLVEAGASVFPKDRWGNTPLDEGRM--------------CGNKNLIKLLEDAKSTQLLEFPHGFQDTA 740 (821)
Q Consensus 679 ~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~--------------~~~~~i~~~Ll~~~a~~~~~~~~~~~~~~ 740 (821)
.++.+++++|+++|++++.+|..|+||||+|+. .++.+++++|+++|+++...+..|.+|.+
T Consensus 329 ~~~~eIVklLLe~GADIN~kD~~G~TPLH~A~~~lav~~~ld~~~~~~~~~eVVklLL~~GADIn~kn~~G~TPLh 404 (764)
T PHA02716 329 NISTDIIKLLHEYGNDLNEPDNIGNTVLHTYLSMLSVVNILDPETDNDIRLDVIQCLISLGADITAVNCLGYTPLT 404 (764)
T ss_pred CCCchHHHHHHHcCCCCccCCCCCCCHHHHHHHhhhhhccccccccccChHHHHHHHHHCCCCCCCcCCCCCChHH
Confidence 468899999999999999999999999999875 37899999999999999999999999986
No 26
>PHA03095 ankyrin-like protein; Provisional
Probab=99.96 E-value=1.1e-28 Score=278.71 Aligned_cols=224 Identities=23% Similarity=0.213 Sum_probs=202.1
Q ss_pred hhhhhhhcccccccccchhhhHhhhHHHHhhcC---CHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcC-CHHHHHHHHH
Q 003425 518 DLRLKQLQSDITFHISKHEAELALKVNSAAYHG---DLYQLEGLIRAGADPNRTDYDGRSPLHLAASRG-YEEIMTFLIQ 593 (821)
Q Consensus 518 ~~~~~~l~~~~~~~~~~~~~~~~~~L~~A~~~g---~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~g-~~~~v~~Ll~ 593 (821)
+.....++++.+ ++..+..|.||||.|+..| +.++++.|++.|+|+|.++..|.||||+|+..| +.+++++|++
T Consensus 28 ~~v~~Ll~~ga~--vn~~~~~g~t~Lh~a~~~~~~~~~~iv~~Ll~~Gadin~~~~~g~TpLh~A~~~~~~~~iv~lLl~ 105 (471)
T PHA03095 28 EEVRRLLAAGAD--VNFRGEYGKTPLHLYLHYSSEKVKDIVRLLLEAGADVNAPERCGFTPLHLYLYNATTLDVIKLLIK 105 (471)
T ss_pred HHHHHHHHcCCC--cccCCCCCCCHHHHHHHhcCCChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCcHHHHHHHHH
Confidence 344444544443 4567778999999999999 999999999999999999999999999999999 5999999999
Q ss_pred cCCCCCCCCCCCCcHHHHHH--HcCChHHHHHHHhcCCCCCcc--cccchhhHHHhcC--CHHHHHHHHHCCCCCCCCCC
Q 003425 594 KGVDINLKDNFGNTPLLEAI--KYGNDGAASLLVKEGASLNVE--EAGSFLCTAVARG--DSDLLKRVLSNGIDPNTRDY 667 (821)
Q Consensus 594 ~g~~~~~~~~~g~tpL~~A~--~~~~~~~v~~Ll~~~~~~~~~--~~~t~l~~A~~~~--~~~~v~~Ll~~g~~~~~~d~ 667 (821)
+|++++.+|..|.||||+|+ ..++.+++++|+++|++++.. .|.||||.|+..+ +.+++++|+++|++++..|.
T Consensus 106 ~ga~in~~~~~g~tpLh~a~~~~~~~~~iv~~Ll~~gad~~~~d~~g~tpL~~a~~~~~~~~~iv~~Ll~~g~~~~~~d~ 185 (471)
T PHA03095 106 AGADVNAKDKVGRTPLHVYLSGFNINPKVIRLLLRKGADVNALDLYGMTPLAVLLKSRNANVELLRLLIDAGADVYAVDD 185 (471)
T ss_pred cCCCCCCCCCCCCCHHHHHhhCCcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCcccCC
Confidence 99999999999999999999 556889999999999999875 4899999998876 67999999999999999999
Q ss_pred CCCcHHHHHHHc--CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCH--HHHHHHHhccccccccCCCCCCcccccc
Q 003425 668 DLRTPLHVAASE--GLYLMAKLLVEAGASVFPKDRWGNTPLDEGRMCGNK--NLIKLLEDAKSTQLLEFPHGFQDTADKR 743 (821)
Q Consensus 668 ~g~T~Lh~A~~~--g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~--~i~~~Ll~~~a~~~~~~~~~~~~~~~~~ 743 (821)
.|.||||+|+.. ++.++++.|+++|++++.+|..|+||||+|+..|+. .+++.|++.|++.+..+..|.+|.+.+.
T Consensus 186 ~g~t~Lh~~~~~~~~~~~i~~~Ll~~g~~~~~~d~~g~tpLh~Aa~~~~~~~~~v~~ll~~g~din~~d~~g~TpLh~A~ 265 (471)
T PHA03095 186 RFRSLLHHHLQSFKPRARIVRELIRAGCDPAATDMLGNTPLHSMATGSSCKRSLVLPLLIAGISINARNRYGQTPLHYAA 265 (471)
T ss_pred CCCCHHHHHHHHCCCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCchHHHHHHHHHcCCCCCCcCCCCCCHHHHHH
Confidence 999999999975 788999999999999999999999999999999975 6889999999999999999999987543
No 27
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.96 E-value=1.6e-28 Score=272.70 Aligned_cols=235 Identities=28% Similarity=0.298 Sum_probs=206.2
Q ss_pred HHHHHhcCCcchhhhhhhcccccccccchhhhHhhhHHHHhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHH
Q 003425 507 VLTNLLQGKESDLRLKQLQSDITFHISKHEAELALKVNSAAYHGDLYQLEGLIRAGADPNRTDYDGRSPLHLAASRGYEE 586 (821)
Q Consensus 507 ~l~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~g~~~ 586 (821)
.+..+...++.+.....+..+. ..++..+..|.||||.|+..|+.++|++|++.|+++|..+..|.||||.|+..|+.+
T Consensus 4 ~l~~ai~~gd~~~v~~ll~~~~-~~~n~~~~~~~tpL~~A~~~g~~~iv~~Ll~~Ga~~n~~~~~~~t~L~~A~~~~~~~ 82 (434)
T PHA02874 4 DLRMCIYSGDIEAIEKIIKNKG-NCINISVDETTTPLIDAIRSGDAKIVELFIKHGADINHINTKIPHPLLTAIKIGAHD 82 (434)
T ss_pred HHHHHHhcCCHHHHHHHHHcCC-CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHH
Confidence 3455556666655555554332 234455677899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCC-----------------------CCCCCCCCCCcHHHHHHHcCChHHHHHHHhcCCCCCcc--cccchhh
Q 003425 587 IMTFLIQKGV-----------------------DINLKDNFGNTPLLEAIKYGNDGAASLLVKEGASLNVE--EAGSFLC 641 (821)
Q Consensus 587 ~v~~Ll~~g~-----------------------~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~--~~~t~l~ 641 (821)
++++|+++|+ +++.++..|.||||+|+..|+.+++++|+++|++++.. +|.||||
T Consensus 83 iv~~Ll~~g~~~~~~~~~~~~~~~i~~ll~~g~d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad~n~~d~~g~tpLh 162 (434)
T PHA02874 83 IIKLLIDNGVDTSILPIPCIEKDMIKTILDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIH 162 (434)
T ss_pred HHHHHHHCCCCCCcchhccCCHHHHHHHHHCcCCCCCCCCCCccHHHHHHHCCCHHHHHHHHhCCCCCCCcCCCCCCHHH
Confidence 9999998765 46678889999999999999999999999999998875 4889999
Q ss_pred HHHhcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHH
Q 003425 642 TAVARGDSDLLKRVLSNGIDPNTRDYDLRTPLHVAASEGLYLMAKLLVEAGASVFPKDRWGNTPLDEGRMCGNKNLIKLL 721 (821)
Q Consensus 642 ~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~i~~~L 721 (821)
.|+..|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..++ +++++|
T Consensus 163 ~A~~~~~~~iv~~Ll~~g~~~n~~~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~i~~~~~~g~TpL~~A~~~~~-~~i~~L 241 (434)
T PHA02874 163 IAIKHNFFDIIKLLLEKGAYANVKDNNGESPLHNAAEYGDYACIKLLIDHGNHIMNKCKNGFTPLHNAIIHNR-SAIELL 241 (434)
T ss_pred HHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHCCh-HHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999876 566666
Q ss_pred HhccccccccCCCCCCccccccC
Q 003425 722 EDAKSTQLLEFPHGFQDTADKRN 744 (821)
Q Consensus 722 l~~~a~~~~~~~~~~~~~~~~~~ 744 (821)
+ .|++.+..+..|.+|.+.+..
T Consensus 242 l-~~~~in~~d~~G~TpLh~A~~ 263 (434)
T PHA02874 242 I-NNASINDQDIDGSTPLHHAIN 263 (434)
T ss_pred H-cCCCCCCcCCCCCCHHHHHHh
Confidence 6 688999999999999886543
No 28
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.96 E-value=5.2e-29 Score=266.60 Aligned_cols=234 Identities=25% Similarity=0.272 Sum_probs=202.3
Q ss_pred HHHHHHhcCCcchhhhhhhcccccccccchhhhHhhhHHHHhhcCCHHHHHHHHH-----cCCCCCCCCCCCCcHHHHHH
Q 003425 506 KVLTNLLQGKESDLRLKQLQSDITFHISKHEAELALKVNSAAYHGDLYQLEGLIR-----AGADPNRTDYDGRSPLHLAA 580 (821)
Q Consensus 506 ~~l~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~-----~g~~~n~~d~~g~t~L~~A~ 580 (821)
..++.++.....+.+....+ ...+..+.+.+|.+|+|.|++.|..++++..+. ++..+|..+..|.||||.|+
T Consensus 156 TpLh~A~~~~~~E~~k~Li~--~~a~~~K~~~~~~~~iH~aa~s~s~e~mEi~l~~~g~~r~~~in~~~n~~~~pLhlAv 233 (929)
T KOG0510|consen 156 TPLHLAARKNKVEAKKELIN--KGADPCKSDIDGNFPIHEAARSGSKECMEIFLPEHGYERQTHINFDNNEKATPLHLAV 233 (929)
T ss_pred chhhHHHhcChHHHHHHHHh--cCCCCCcccCcCCchHHHHHHhcchhhhhhhhccccchhhcccccccCCCCcchhhhh
Confidence 34555665555443344443 334566788889999999999999999999997 66788999999999999999
Q ss_pred HcCCHHHHHHHHHcCCC---------------CCCCCCCCCcHHHHHHHcCChHHHHHHHhcCCCCCcc--cccchhhHH
Q 003425 581 SRGYEEIMTFLIQKGVD---------------INLKDNFGNTPLLEAIKYGNDGAASLLVKEGASLNVE--EAGSFLCTA 643 (821)
Q Consensus 581 ~~g~~~~v~~Ll~~g~~---------------~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~--~~~t~l~~A 643 (821)
..|+.++++.+|+.|.. +|..|++|.||||+||+.|+.+++..|+..|++++.+ ++.||||.|
T Consensus 234 e~g~~e~lk~~L~n~~~~a~~~~~~~~q~kelv~~~d~dg~tpLH~a~r~G~~~svd~Ll~~Ga~I~~kn~d~~spLH~A 313 (929)
T KOG0510|consen 234 EGGDIEMLKMCLQNGKKIADVQLDAMQQEKELVNDEDNDGCTPLHYAARQGGPESVDNLLGFGASINSKNKDEESPLHFA 313 (929)
T ss_pred hcCCHHHHHHHHhCccccchhhhHHHHHHHHHhhcccccCCchHHHHHHcCChhHHHHHHHcCCcccccCCCCCCchHHH
Confidence 99999999999998653 4567899999999999999999999999999999876 478999999
Q ss_pred HhcCCHHHHHHHHH-CC-CCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCC---CCCCCCCCHHHHHHHcCCHHHH
Q 003425 644 VARGDSDLLKRVLS-NG-IDPNTRDYDLRTPLHVAASEGLYLMAKLLVEAGASVF---PKDRWGNTPLDEGRMCGNKNLI 718 (821)
Q Consensus 644 ~~~~~~~~v~~Ll~-~g-~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~ga~~~---~~d~~g~t~l~~A~~~~~~~i~ 718 (821)
|..|+.+.++.||+ .| ...|..|-.|.||||+|++.|+..++++|++.||+.. ..|.+|.||||.|+..|+..+|
T Consensus 314 A~yg~~ntv~rLL~~~~~rllne~D~~g~tpLHlaa~~gH~~v~qlLl~~GA~~~~~~e~D~dg~TaLH~Aa~~g~~~av 393 (929)
T KOG0510|consen 314 AIYGRINTVERLLQESDTRLLNESDLHGMTPLHLAAKSGHDRVVQLLLNKGALFLNMSEADSDGNTALHLAAKYGNTSAV 393 (929)
T ss_pred HHcccHHHHHHHHhCcCccccccccccCCCchhhhhhcCHHHHHHHHHhcChhhhcccccccCCchhhhHHHHhccHHHH
Confidence 99999999999998 44 4668889999999999999999999999999999987 5699999999999999999999
Q ss_pred HHHHhccccccccCCCCCCcccc
Q 003425 719 KLLEDAKSTQLLEFPHGFQDTAD 741 (821)
Q Consensus 719 ~~Ll~~~a~~~~~~~~~~~~~~~ 741 (821)
++|+.+|++....+..|.+..+.
T Consensus 394 ~~Li~~Ga~I~~~n~~g~SA~~~ 416 (929)
T KOG0510|consen 394 QKLISHGADIGVKNKKGKSAFDT 416 (929)
T ss_pred HHHHHcCCceeeccccccccccc
Confidence 99999999999988888877664
No 29
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.96 E-value=1.2e-28 Score=289.26 Aligned_cols=213 Identities=24% Similarity=0.280 Sum_probs=196.2
Q ss_pred ccccchhhhHhhhHHHHhhcCCH-HHHHHHHHcCCCCCCCCCCCCcHHHHHHHcC-CHHHHHHHHHcCCCCCCCCCCCCc
Q 003425 530 FHISKHEAELALKVNSAAYHGDL-YQLEGLIRAGADPNRTDYDGRSPLHLAASRG-YEEIMTFLIQKGVDINLKDNFGNT 607 (821)
Q Consensus 530 ~~~~~~~~~~~~~L~~A~~~g~~-~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~g-~~~~v~~Ll~~g~~~~~~~~~g~t 607 (821)
..++..+..|.||||.|+..|+. ++++.|++.|++++..|..|.||||+|+..| +.++++.|+..|++++..|..|.|
T Consensus 264 ~~vn~~d~~g~TpLh~Aa~~~~~~~iv~lLl~~gadin~~d~~g~TpLh~Aa~~g~~~~~v~~Ll~~gadin~~d~~g~T 343 (682)
T PHA02876 264 FSVNSIDDCKNTPLHHASQAPSLSRLVPKLLERGADVNAKNIKGETPLYLMAKNGYDTENIRTLIMLGADVNAADRLYIT 343 (682)
T ss_pred CCCCCCCCCCCCHHHHHHhCCCHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCCHHHHHHHHHcCCCCCCcccCCCc
Confidence 34556677899999999999997 5899999999999999999999999999999 599999999999999999999999
Q ss_pred HHHHHHHc-CChHHHHHHHhcCCCCCccc--ccchhhHHHhcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCc-HH
Q 003425 608 PLLEAIKY-GNDGAASLLVKEGASLNVEE--AGSFLCTAVARGDSDLLKRVLSNGIDPNTRDYDLRTPLHVAASEGL-YL 683 (821)
Q Consensus 608 pL~~A~~~-~~~~~v~~Ll~~~~~~~~~~--~~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~T~Lh~A~~~g~-~~ 683 (821)
|||+|+.. ++.++++.|++.|++++..+ |.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..++ ..
T Consensus 344 pLh~A~~~~~~~~iv~lLl~~gadin~~d~~G~TpLh~Aa~~~~~~iv~~Ll~~gad~~~~~~~g~T~Lh~A~~~~~~~~ 423 (682)
T PHA02876 344 PLHQASTLDRNKDIVITLLELGANVNARDYCDKTPIHYAAVRNNVVIINTLLDYGADIEALSQKIGTALHFALCGTNPYM 423 (682)
T ss_pred HHHHHHHhCCcHHHHHHHHHcCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCccccCCCCCchHHHHHHcCCHHH
Confidence 99999985 57889999999999998764 8899999999999999999999999999999999999999998665 56
Q ss_pred HHHHHHHcCCCCCCCCCCCCCHHHHHHHcC-CHHHHHHHHhccccccccCCCCCCccccc
Q 003425 684 MAKLLVEAGASVFPKDRWGNTPLDEGRMCG-NKNLIKLLEDAKSTQLLEFPHGFQDTADK 742 (821)
Q Consensus 684 ~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~-~~~i~~~Ll~~~a~~~~~~~~~~~~~~~~ 742 (821)
++++|+++|+++|.+|..|+||||+|+..| +.+++++|+++|++++..+..|.++....
T Consensus 424 ~vk~Ll~~gadin~~d~~G~TpLh~Aa~~~~~~~iv~lLl~~Gad~n~~d~~g~tpl~~a 483 (682)
T PHA02876 424 SVKTLIDRGANVNSKNKDLSTPLHYACKKNCKLDVIEMLLDNGADVNAINIQNQYPLLIA 483 (682)
T ss_pred HHHHHHhCCCCCCcCCCCCChHHHHHHHhCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHH
Confidence 799999999999999999999999999977 68999999999999999999999887643
No 30
>PHA02795 ankyrin-like protein; Provisional
Probab=99.96 E-value=2.9e-28 Score=256.70 Aligned_cols=185 Identities=17% Similarity=0.041 Sum_probs=171.5
Q ss_pred HHhhcCCHHHHHHHHHcCCCCC------CCCCCCCcHHHHHHH--cCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcC
Q 003425 545 SAAYHGDLYQLEGLIRAGADPN------RTDYDGRSPLHLAAS--RGYEEIMTFLIQKGVDINLKDNFGNTPLLEAIKYG 616 (821)
Q Consensus 545 ~A~~~g~~~~v~~Ll~~g~~~n------~~d~~g~t~L~~A~~--~g~~~~v~~Ll~~g~~~~~~~~~g~tpL~~A~~~~ 616 (821)
.|+..+..++++.|+.+|+++| .++..++|+||+|+. .|+.+++++|+++|||++.. ++.||+|.|+..+
T Consensus 83 ~~~~~~~k~~~~~l~s~~~~~~~~~~~~~~~~~~~~~L~~~~~n~~n~~eiV~~LI~~GADIn~~--~~~t~lh~A~~~~ 160 (437)
T PHA02795 83 LFAYITYKDIISALVSKNYMEDIFSIIIKNCNSVQDLLLYYLSNAYVEIDIVDFMVDHGAVIYKI--ECLNAYFRGICKK 160 (437)
T ss_pred HHhhcchHHHHHHHHhcccccchhhhhhhccccccHHHHHHHHhcCCCHHHHHHHHHCCCCCCCC--CCCCHHHHHHHcC
Confidence 8999999999999999999999 788899999999999 89999999999999999985 4589999999999
Q ss_pred ChHHHHHHHhcCCCCCcc--------cccchhhHHHhcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHH
Q 003425 617 NDGAASLLVKEGASLNVE--------EAGSFLCTAVARGDSDLLKRVLSNGIDPNTRDYDLRTPLHVAASEGLYLMAKLL 688 (821)
Q Consensus 617 ~~~~v~~Ll~~~~~~~~~--------~~~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~T~Lh~A~~~g~~~~v~~L 688 (821)
+.+++++|+++|++.... .+.+++|.|+..++.+++++|+++|+++|.+|..|.||||+|+..|+.+++++|
T Consensus 161 ~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~GADIN~kD~~G~TpLh~Aa~~g~~eiVelL 240 (437)
T PHA02795 161 ESSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPYIEDINQLDAGGRTLLYRAIYAGYIDLVSWL 240 (437)
T ss_pred cHHHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHHHHHhCcCCcCcCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 999999999999854321 256889999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCCCCCCCCCCCHHHHHHHcCC--------HHHHHHHHhcccccccc
Q 003425 689 VEAGASVFPKDRWGNTPLDEGRMCGN--------KNLIKLLEDAKSTQLLE 731 (821)
Q Consensus 689 l~~ga~~~~~d~~g~t~l~~A~~~~~--------~~i~~~Ll~~~a~~~~~ 731 (821)
+++||+++.+|..|+||||+|+..|+ .+++++|+++|++....
T Consensus 241 L~~GAdIN~~d~~G~TpLh~Aa~~g~~~~~~~~~~eIvelLL~~gadI~~~ 291 (437)
T PHA02795 241 LENGANVNAVMSNGYTCLDVAVDRGSVIARRETHLKILEILLREPLSIDCI 291 (437)
T ss_pred HHCCCCCCCcCCCCCCHHHHHHHcCCcccccccHHHHHHHHHhCCCCCCch
Confidence 99999999999999999999999984 69999999999977653
No 31
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.96 E-value=2.4e-28 Score=275.25 Aligned_cols=189 Identities=18% Similarity=0.262 Sum_probs=119.7
Q ss_pred HhhhHHHHhhcC------CHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHc---CCHHHHHHHHHcCCCC-CCCCCCCCcH
Q 003425 539 LALKVNSAAYHG------DLYQLEGLIRAGADPNRTDYDGRSPLHLAASR---GYEEIMTFLIQKGVDI-NLKDNFGNTP 608 (821)
Q Consensus 539 ~~~~L~~A~~~g------~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~---g~~~~v~~Ll~~g~~~-~~~~~~g~tp 608 (821)
+.||||.|+.++ +.++++.|+++|+|+|.+|..|.||||.|+.. |+.+++++|+++|+|+ +.+|..|.||
T Consensus 69 ~~tpL~~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~Gadin~~~d~~g~tp 148 (494)
T PHA02989 69 IETPLCAVLRNREITSNKIKKIVKLLLKFGADINLKTFNGVSPIVCFIYNSNINNCDMLRFLLSKGINVNDVKNSRGYNL 148 (494)
T ss_pred CCCcHHHHHhccCcchhhHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhcccCcHHHHHHHHHCCCCcccccCCCCCCH
Confidence 456666665543 34566666666666666666666666665543 4566666666666666 5666666666
Q ss_pred HHHHHHc--CChHHHHHHHhcCCCCCcc---cccchhhHHHhcC----CHHHHHHHHHCCCCCCC---------------
Q 003425 609 LLEAIKY--GNDGAASLLVKEGASLNVE---EAGSFLCTAVARG----DSDLLKRVLSNGIDPNT--------------- 664 (821)
Q Consensus 609 L~~A~~~--~~~~~v~~Ll~~~~~~~~~---~~~t~l~~A~~~~----~~~~v~~Ll~~g~~~~~--------------- 664 (821)
||+|+.. ++.+++++|+++|++++.. .|.||||.|+..+ +.+++++|+++|++++.
T Consensus 149 Lh~a~~~~~~~~~iv~~Ll~~Gadi~~~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~vn~~~~~~~t~l~~~~~~ 228 (494)
T PHA02989 149 LHMYLESFSVKKDVIKILLSFGVNLFEKTSLYGLTPMNIYLRNDIDVISIKVIKYLIKKGVNIETNNNGSESVLESFLDN 228 (494)
T ss_pred HHHHHHhccCCHHHHHHHHHcCCCccccccccCCChHHHHHhcccccccHHHHHHHHhCCCCccccCCccccHHHHHHHh
Confidence 6666543 4566666666666666542 3566666665443 56666666666665554
Q ss_pred -----------------------CCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHH
Q 003425 665 -----------------------RDYDLRTPLHVAASEGLYLMAKLLVEAGASVFPKDRWGNTPLDEGRMCGNKNLIKLL 721 (821)
Q Consensus 665 -----------------------~d~~g~T~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~i~~~L 721 (821)
+|..|.||||+|+..|+.+++++|+++|||++.+|..|.||||+|+..|+.++++.|
T Consensus 229 ~~~~~~~~~~il~~l~~~advn~~d~~G~TpL~~Aa~~~~~~~v~~LL~~Gadin~~d~~G~TpL~~A~~~~~~~iv~~L 308 (494)
T PHA02989 229 NKILSKKEFKVLNFILKYIKINKKDKKGFNPLLISAKVDNYEAFNYLLKLGDDIYNVSKDGDTVLTYAIKHGNIDMLNRI 308 (494)
T ss_pred chhhcccchHHHHHHHhCCCCCCCCCCCCCHHHHHHHhcCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHH
Confidence 445566666666666666666666666666666666666666666666666666666
Q ss_pred Hhcccc
Q 003425 722 EDAKST 727 (821)
Q Consensus 722 l~~~a~ 727 (821)
++.++.
T Consensus 309 L~~~p~ 314 (494)
T PHA02989 309 LQLKPG 314 (494)
T ss_pred HhcCCC
Confidence 665543
No 32
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.96 E-value=2.5e-28 Score=240.61 Aligned_cols=175 Identities=16% Similarity=0.210 Sum_probs=158.6
Q ss_pred hhhHhhhHHHHhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcC--CHHHHHHHHHcCCCCCCCC-CCCCcHHHHH
Q 003425 536 EAELALKVNSAAYHGDLYQLEGLIRAGADPNRTDYDGRSPLHLAASRG--YEEIMTFLIQKGVDINLKD-NFGNTPLLEA 612 (821)
Q Consensus 536 ~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~g--~~~~v~~Ll~~g~~~~~~~-~~g~tpL~~A 612 (821)
.+.+.+|||.|+..|+.+.|+.|++. +|..|..|.||||+|+..+ +.+++++|+++|+++|.++ ..|.||||+|
T Consensus 18 ~~~~~~pL~~A~~~~~~~~vk~Li~~---~n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~~~~~~g~TpLh~a 94 (209)
T PHA02859 18 FYRYCNPLFYYVEKDDIEGVKKWIKF---VNDCNDLYETPIFSCLEKDKVNVEILKFLIENGADVNFKTRDNNLSALHHY 94 (209)
T ss_pred hhccCcHHHHHHHhCcHHHHHHHHHh---hhccCccCCCHHHHHHHcCCCCHHHHHHHHHCCCCCCccCCCCCCCHHHHH
Confidence 56678999999999999999999975 5677889999999999855 8999999999999999997 4899999998
Q ss_pred HHc---CChHHHHHHHhcCCCCCccc--ccchhhHHHh--cCCHHHHHHHHHCCCCCCCCCCCCCcHHHH-HHHcCcHHH
Q 003425 613 IKY---GNDGAASLLVKEGASLNVEE--AGSFLCTAVA--RGDSDLLKRVLSNGIDPNTRDYDLRTPLHV-AASEGLYLM 684 (821)
Q Consensus 613 ~~~---~~~~~v~~Ll~~~~~~~~~~--~~t~l~~A~~--~~~~~~v~~Ll~~g~~~~~~d~~g~T~Lh~-A~~~g~~~~ 684 (821)
+.. ++.+++++|+++|++++..+ |.||||.|+. .++.+++++|+++|++++.+|..|.||||. |+..++.++
T Consensus 95 ~~~~~~~~~eiv~~Ll~~gadin~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadin~~d~~g~t~Lh~~a~~~~~~~i 174 (209)
T PHA02859 95 LSFNKNVEPEILKILIDSGSSITEEDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFLNKDFDNNNILYSYILFHSDKKI 174 (209)
T ss_pred HHhCccccHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCcccccCCCCcHHHHHHHhcCCHHH
Confidence 764 47999999999999999764 8899999886 468999999999999999999999999996 566889999
Q ss_pred HHHHHHcCCCCCCCCCCCCCHHHHHHHcC
Q 003425 685 AKLLVEAGASVFPKDRWGNTPLDEGRMCG 713 (821)
Q Consensus 685 v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~ 713 (821)
+++|+++|++++.+|..|.||+|+|+.++
T Consensus 175 v~~Ll~~Gadi~~~d~~g~tpl~la~~~~ 203 (209)
T PHA02859 175 FDFLTSLGIDINETNKSGYNCYDLIKFRN 203 (209)
T ss_pred HHHHHHcCCCCCCCCCCCCCHHHHHhhhh
Confidence 99999999999999999999999999765
No 33
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.96 E-value=5.2e-28 Score=283.83 Aligned_cols=229 Identities=23% Similarity=0.205 Sum_probs=177.4
Q ss_pred HhcCCcchhhhhhhcccccccccchhhhHhhhHHHHhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHH
Q 003425 511 LLQGKESDLRLKQLQSDITFHISKHEAELALKVNSAAYHGDLYQLEGLIRAGADPNRTDYDGRSPLHLAASRGYEEIMTF 590 (821)
Q Consensus 511 ~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~g~~~~v~~ 590 (821)
.............++.+.+ ++..+..|.||||.||..|+.++|++|+++|++++..+.+|.||||+|+..|+.+++++
T Consensus 152 ~i~~~~~~i~k~Ll~~Gad--vn~~d~~G~TpLh~Aa~~G~~~iv~~LL~~Gad~n~~~~~g~t~L~~A~~~~~~~ivk~ 229 (682)
T PHA02876 152 RIQQDELLIAEMLLEGGAD--VNAKDIYCITPIHYAAERGNAKMVNLLLSYGADVNIIALDDLSVLECAVDSKNIDTIKA 229 (682)
T ss_pred HHHCCcHHHHHHHHhCCCC--CCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCccCCCCCCHHHHHHHcCCHHHHHH
Confidence 3344444444445555444 45677889999999999999999999999999999888888888888888887776655
Q ss_pred HH-----------------------------HcCCCCCCCCCCCCcHHHHHHHcCCh-HHHHHHHhcCCCCCcc--cccc
Q 003425 591 LI-----------------------------QKGVDINLKDNFGNTPLLEAIKYGND-GAASLLVKEGASLNVE--EAGS 638 (821)
Q Consensus 591 Ll-----------------------------~~g~~~~~~~~~g~tpL~~A~~~~~~-~~v~~Ll~~~~~~~~~--~~~t 638 (821)
|+ +.|++++..|..|.||||+|+..++. +++++|++.|++++.. +|.|
T Consensus 230 Ll~~~~~~~~~~~~L~~ai~~~~~~~~~~Ll~~g~~vn~~d~~g~TpLh~Aa~~~~~~~iv~lLl~~gadin~~d~~g~T 309 (682)
T PHA02876 230 IIDNRSNINKNDLSLLKAIRNEDLETSLLLYDAGFSVNSIDDCKNTPLHHASQAPSLSRLVPKLLERGADVNAKNIKGET 309 (682)
T ss_pred HHhcCCCCCCCcHHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhCCCHHHHHHHHHHCCCCCCCcCCCCCC
Confidence 44 44556777777888888888888875 5788888888887765 4778
Q ss_pred hhhHHHhcC-CHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHH
Q 003425 639 FLCTAVARG-DSDLLKRVLSNGIDPNTRDYDLRTPLHVAASE-GLYLMAKLLVEAGASVFPKDRWGNTPLDEGRMCGNKN 716 (821)
Q Consensus 639 ~l~~A~~~~-~~~~v~~Ll~~g~~~~~~d~~g~T~Lh~A~~~-g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~ 716 (821)
|||.|+..| +.++++.|+..|++++..|..|.||||+|+.. ++.+++++|+++|++++.+|..|.||||+|+..|+.+
T Consensus 310 pLh~Aa~~g~~~~~v~~Ll~~gadin~~d~~g~TpLh~A~~~~~~~~iv~lLl~~gadin~~d~~G~TpLh~Aa~~~~~~ 389 (682)
T PHA02876 310 PLYLMAKNGYDTENIRTLIMLGADVNAADRLYITPLHQASTLDRNKDIVITLLELGANVNARDYCDKTPIHYAAVRNNVV 389 (682)
T ss_pred HHHHHHHhCCCHHHHHHHHHcCCCCCCcccCCCcHHHHHHHhCCcHHHHHHHHHcCCCCccCCCCCCCHHHHHHHcCCHH
Confidence 888888888 57888888888888888888888888888774 4677788888888888888888888888888888888
Q ss_pred HHHHHHhccccccccCCCCCCcccc
Q 003425 717 LIKLLEDAKSTQLLEFPHGFQDTAD 741 (821)
Q Consensus 717 i~~~Ll~~~a~~~~~~~~~~~~~~~ 741 (821)
++++|+++|+++...+..|.++.+.
T Consensus 390 iv~~Ll~~gad~~~~~~~g~T~Lh~ 414 (682)
T PHA02876 390 IINTLLDYGADIEALSQKIGTALHF 414 (682)
T ss_pred HHHHHHHCCCCccccCCCCCchHHH
Confidence 8888888888777777666666553
No 34
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.96 E-value=4.4e-28 Score=273.04 Aligned_cols=222 Identities=19% Similarity=0.169 Sum_probs=187.9
Q ss_pred hhhhhhhcccccccccchhhhHhhhHHHHhhc--CCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcC------CHHHHH
Q 003425 518 DLRLKQLQSDITFHISKHEAELALKVNSAAYH--GDLYQLEGLIRAGADPNRTDYDGRSPLHLAASRG------YEEIMT 589 (821)
Q Consensus 518 ~~~~~~l~~~~~~~~~~~~~~~~~~L~~A~~~--g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~g------~~~~v~ 589 (821)
+....+++++.+.+ .. ..|.||||.++.. ++.++|+.|+++|+|+|.++ .+.||||.|+.++ +.++++
T Consensus 17 ~~v~~LL~~GadvN--~~-~~g~t~l~~~~~~~~~~~~iv~~Ll~~GAdvn~~~-~~~tpL~~a~~~~~~~~~~~~~iv~ 92 (494)
T PHA02989 17 NALEFLLRTGFDVN--EE-YRGNSILLLYLKRKDVKIKIVKLLIDNGADVNYKG-YIETPLCAVLRNREITSNKIKKIVK 92 (494)
T ss_pred HHHHHHHHcCCCcc--cc-cCCCCHHHHHHhcCCCChHHHHHHHHcCCCccCCC-CCCCcHHHHHhccCcchhhHHHHHH
Confidence 34445555555543 33 4577888765543 47999999999999999886 5799999998754 578999
Q ss_pred HHHHcCCCCCCCCCCCCcHHHHHHHc---CChHHHHHHHhcCCCC-Cc--ccccchhhHHHhc--CCHHHHHHHHHCCCC
Q 003425 590 FLIQKGVDINLKDNFGNTPLLEAIKY---GNDGAASLLVKEGASL-NV--EEAGSFLCTAVAR--GDSDLLKRVLSNGID 661 (821)
Q Consensus 590 ~Ll~~g~~~~~~~~~g~tpL~~A~~~---~~~~~v~~Ll~~~~~~-~~--~~~~t~l~~A~~~--~~~~~v~~Ll~~g~~ 661 (821)
+|+++|+|+|.+|..|.||||.|+.. ++.+++++|+++|+++ +. ..|.||||.|+.. ++.+++++|+++|++
T Consensus 93 ~Ll~~Gadin~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~Gadin~~~d~~g~tpLh~a~~~~~~~~~iv~~Ll~~Gad 172 (494)
T PHA02989 93 LLLKFGADINLKTFNGVSPIVCFIYNSNINNCDMLRFLLSKGINVNDVKNSRGYNLLHMYLESFSVKKDVIKILLSFGVN 172 (494)
T ss_pred HHHHCCCCCCCCCCCCCcHHHHHHHhcccCcHHHHHHHHHCCCCcccccCCCCCCHHHHHHHhccCCHHHHHHHHHcCCC
Confidence 99999999999999999999988765 6789999999999999 55 3589999998764 688999999999999
Q ss_pred CCC-CCCCCCcHHHHHHHcC----cHHHHHHHHHcCCCCCC--------------------------------------C
Q 003425 662 PNT-RDYDLRTPLHVAASEG----LYLMAKLLVEAGASVFP--------------------------------------K 698 (821)
Q Consensus 662 ~~~-~d~~g~T~Lh~A~~~g----~~~~v~~Ll~~ga~~~~--------------------------------------~ 698 (821)
++. .+..|.||||.|+..+ +.+++++|+++|++++. +
T Consensus 173 i~~~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~vn~~~~~~~t~l~~~~~~~~~~~~~~~~il~~l~~~advn~~ 252 (494)
T PHA02989 173 LFEKTSLYGLTPMNIYLRNDIDVISIKVIKYLIKKGVNIETNNNGSESVLESFLDNNKILSKKEFKVLNFILKYIKINKK 252 (494)
T ss_pred ccccccccCCChHHHHHhcccccccHHHHHHHHhCCCCccccCCccccHHHHHHHhchhhcccchHHHHHHHhCCCCCCC
Confidence 998 6889999999998764 89999999999887654 4
Q ss_pred CCCCCCHHHHHHHcCCHHHHHHHHhccccccccCCCCCCcccccc
Q 003425 699 DRWGNTPLDEGRMCGNKNLIKLLEDAKSTQLLEFPHGFQDTADKR 743 (821)
Q Consensus 699 d~~g~t~l~~A~~~~~~~i~~~Ll~~~a~~~~~~~~~~~~~~~~~ 743 (821)
|..|+||||+|+..|+.+++++|+++|++++..+..|.+|.+.+.
T Consensus 253 d~~G~TpL~~Aa~~~~~~~v~~LL~~Gadin~~d~~G~TpL~~A~ 297 (494)
T PHA02989 253 DKKGFNPLLISAKVDNYEAFNYLLKLGDDIYNVSKDGDTVLTYAI 297 (494)
T ss_pred CCCCCCHHHHHHHhcCHHHHHHHHHcCCCccccCCCCCCHHHHHH
Confidence 556999999999999999999999999999999999999987543
No 35
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.96 E-value=2.1e-28 Score=261.94 Aligned_cols=221 Identities=24% Similarity=0.302 Sum_probs=196.7
Q ss_pred hhhhhhhcccccccccchhhhHhhhHHHHhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHH----
Q 003425 518 DLRLKQLQSDITFHISKHEAELALKVNSAAYHGDLYQLEGLIRAGADPNRTDYDGRSPLHLAASRGYEEIMTFLIQ---- 593 (821)
Q Consensus 518 ~~~~~~l~~~~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~---- 593 (821)
......++.+ .+++-.|..+.||||.||..++.|..+.|++.|+|+-..|.+|++|+|.|++.|..++.+..+.
T Consensus 135 s~L~~Ll~~~--~dvnl~de~~~TpLh~A~~~~~~E~~k~Li~~~a~~~K~~~~~~~~iH~aa~s~s~e~mEi~l~~~g~ 212 (929)
T KOG0510|consen 135 SCLKLLLDYG--ADVNLEDENGFTPLHLAARKNKVEAKKELINKGADPCKSDIDGNFPIHEAARSGSKECMEIFLPEHGY 212 (929)
T ss_pred HHHHHHHHhc--CCccccccCCCchhhHHHhcChHHHHHHHHhcCCCCCcccCcCCchHHHHHHhcchhhhhhhhccccc
Confidence 3334444444 5677788899999999999999998899999999999999999999999999999999999998
Q ss_pred -cCCCCCCCCCCCCcHHHHHHHcCChHHHHHHHhcCCCCCc-----------------ccccchhhHHHhcCCHHHHHHH
Q 003425 594 -KGVDINLKDNFGNTPLLEAIKYGNDGAASLLVKEGASLNV-----------------EEAGSFLCTAVARGDSDLLKRV 655 (821)
Q Consensus 594 -~g~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~-----------------~~~~t~l~~A~~~~~~~~v~~L 655 (821)
++..+|.-+..|.||||.|+..|+.++++.+++.|+.... .+|.||||+||+.|+.+.++.|
T Consensus 213 ~r~~~in~~~n~~~~pLhlAve~g~~e~lk~~L~n~~~~a~~~~~~~~q~kelv~~~d~dg~tpLH~a~r~G~~~svd~L 292 (929)
T KOG0510|consen 213 ERQTHINFDNNEKATPLHLAVEGGDIEMLKMCLQNGKKIADVQLDAMQQEKELVNDEDNDGCTPLHYAARQGGPESVDNL 292 (929)
T ss_pred hhhcccccccCCCCcchhhhhhcCCHHHHHHHHhCccccchhhhHHHHHHHHHhhcccccCCchHHHHHHcCChhHHHHH
Confidence 6788999999999999999999999999999998764432 3589999999999999999999
Q ss_pred HHCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHH-cC-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccccccc---
Q 003425 656 LSNGIDPNTRDYDLRTPLHVAASEGLYLMAKLLVE-AG-ASVFPKDRWGNTPLDEGRMCGNKNLIKLLEDAKSTQLL--- 730 (821)
Q Consensus 656 l~~g~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~-~g-a~~~~~d~~g~t~l~~A~~~~~~~i~~~Ll~~~a~~~~--- 730 (821)
+..|++++.++.++.||||.||.+|+.++|+-||+ .| ...|..|..|.||||+|+.+||..++++|++.||....
T Consensus 293 l~~Ga~I~~kn~d~~spLH~AA~yg~~ntv~rLL~~~~~rllne~D~~g~tpLHlaa~~gH~~v~qlLl~~GA~~~~~~e 372 (929)
T KOG0510|consen 293 LGFGASINSKNKDEESPLHFAAIYGRINTVERLLQESDTRLLNESDLHGMTPLHLAAKSGHDRVVQLLLNKGALFLNMSE 372 (929)
T ss_pred HHcCCcccccCCCCCCchHHHHHcccHHHHHHHHhCcCccccccccccCCCchhhhhhcCHHHHHHHHHhcChhhhcccc
Confidence 99999999999999999999999999999999999 54 56788999999999999999999999999999999872
Q ss_pred cCCCCCCccc
Q 003425 731 EFPHGFQDTA 740 (821)
Q Consensus 731 ~~~~~~~~~~ 740 (821)
.+..|.++.+
T Consensus 373 ~D~dg~TaLH 382 (929)
T KOG0510|consen 373 ADSDGNTALH 382 (929)
T ss_pred cccCCchhhh
Confidence 3566666655
No 36
>PHA02798 ankyrin-like protein; Provisional
Probab=99.96 E-value=8.6e-28 Score=270.34 Aligned_cols=200 Identities=22% Similarity=0.222 Sum_probs=179.7
Q ss_pred HHHhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHc-----CCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcC--
Q 003425 544 NSAAYHGDLYQLEGLIRAGADPNRTDYDGRSPLHLAASR-----GYEEIMTFLIQKGVDINLKDNFGNTPLLEAIKYG-- 616 (821)
Q Consensus 544 ~~A~~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~-----g~~~~v~~Ll~~g~~~~~~~~~g~tpL~~A~~~~-- 616 (821)
+.+...++.++++.|+++|+|+|..|..|.||||.|+.+ ++.+++++|+++|+|+|.+|..|.||||+|+..+
T Consensus 43 yl~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpL~~~~~n~~~~~~~~~iv~~Ll~~GadiN~~d~~G~TpLh~a~~~~~~ 122 (489)
T PHA02798 43 YLQRDSPSTDIVKLFINLGANVNGLDNEYSTPLCTILSNIKDYKHMLDIVKILIENGADINKKNSDGETPLYCLLSNGYI 122 (489)
T ss_pred HHhCCCCCHHHHHHHHHCCCCCCCCCCCCCChHHHHHHhHHhHHhHHHHHHHHHHCCCCCCCCCCCcCcHHHHHHHcCCc
Confidence 344556789999999999999999999999999999865 6789999999999999999999999999999976
Q ss_pred -ChHHHHHHHhcCCCCCccc--ccchhhHHHhcCC---HHHHHHHHHCCCCCCCCC-CCCCcHHHHHHHc----CcHHHH
Q 003425 617 -NDGAASLLVKEGASLNVEE--AGSFLCTAVARGD---SDLLKRVLSNGIDPNTRD-YDLRTPLHVAASE----GLYLMA 685 (821)
Q Consensus 617 -~~~~v~~Ll~~~~~~~~~~--~~t~l~~A~~~~~---~~~v~~Ll~~g~~~~~~d-~~g~T~Lh~A~~~----g~~~~v 685 (821)
+.+++++|+++|++++..+ |.||||.|+..++ .+++++|+++|++++..+ ..|.||||.++.. ++.+++
T Consensus 123 ~~~~iv~~Ll~~Gadvn~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~gadin~~~~~~~~t~Lh~~~~~~~~~~~~~iv 202 (489)
T PHA02798 123 NNLEILLFMIENGADTTLLDKDGFTMLQVYLQSNHHIDIEIIKLLLEKGVDINTHNNKEKYDTLHCYFKYNIDRIDADIL 202 (489)
T ss_pred ChHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCcchHHHHHHHHHhCCCcccccCcCCCcHHHHHHHhccccCCHHHH
Confidence 7899999999999998764 8899999999998 999999999999999885 5789999998765 478899
Q ss_pred HHHHHcCCC---------------------------------------CCCCCCCCCCHHHHHHHcCCHHHHHHHHhccc
Q 003425 686 KLLVEAGAS---------------------------------------VFPKDRWGNTPLDEGRMCGNKNLIKLLEDAKS 726 (821)
Q Consensus 686 ~~Ll~~ga~---------------------------------------~~~~d~~g~t~l~~A~~~~~~~i~~~Ll~~~a 726 (821)
++|+++|++ +|.+|..|+||||+|+..|+.+++++|+++||
T Consensus 203 k~Li~~Ga~i~~~~~~~~~~~~~~l~~l~~~~~~~~~~i~~~l~~~~dvN~~d~~G~TPL~~A~~~~~~~~v~~LL~~GA 282 (489)
T PHA02798 203 KLFVDNGFIINKENKSHKKKFMEYLNSLLYDNKRFKKNILDFIFSYIDINQVDELGFNPLYYSVSHNNRKIFEYLLQLGG 282 (489)
T ss_pred HHHHHCCCCcccCCccccchHHHHHHHHHhhcccchHHHHHHHHhcCCCCCcCcCCccHHHHHHHcCcHHHHHHHHHcCC
Confidence 999888764 44567789999999999999999999999999
Q ss_pred cccccCCCCCCcccccc
Q 003425 727 TQLLEFPHGFQDTADKR 743 (821)
Q Consensus 727 ~~~~~~~~~~~~~~~~~ 743 (821)
+++..+..|.+|...+.
T Consensus 283 din~~d~~G~TpL~~A~ 299 (489)
T PHA02798 283 DINIITELGNTCLFTAF 299 (489)
T ss_pred cccccCCCCCcHHHHHH
Confidence 99999999999987544
No 37
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.96 E-value=1.6e-28 Score=246.75 Aligned_cols=190 Identities=26% Similarity=0.372 Sum_probs=175.3
Q ss_pred hhhhHhhhHHHHhhcCCHHHHHHHHHc-CCCCCCC--------CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCC
Q 003425 535 HEAELALKVNSAAYHGDLYQLEGLIRA-GADPNRT--------DYDGRSPLHLAASRGYEEIMTFLIQKGVDINLKDNFG 605 (821)
Q Consensus 535 ~~~~~~~~L~~A~~~g~~~~v~~Ll~~-g~~~n~~--------d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g 605 (821)
...+|.|||..||++|+.++|++|+++ ++++... .-+|-+||-.|+..||.++|+.|+++|+++|......
T Consensus 38 ~~~~g~tPL~iaaRnGH~~vVeyLle~~~a~~e~~GsV~FDge~IegappLWaAsaAGHl~vVk~L~~~ga~VN~tT~TN 117 (615)
T KOG0508|consen 38 EVQNGGTPLLIAARNGHADVVEYLLEHCRASPEQGGSVRFDGETIEGAPPLWAASAAGHLEVVKLLLRRGASVNDTTRTN 117 (615)
T ss_pred cccCCCCceeeehhcCcHHHHHHHHHHhcCCccCCceEEeCCcccCCCchhhHHhccCcHHHHHHHHHhcCccccccccC
Confidence 445677999999999999999999984 7776533 3568899999999999999999999999999998888
Q ss_pred CcHHHHHHHcCChHHHHHHHhcCCCCCccc--ccchhhHHHhcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCcHH
Q 003425 606 NTPLLEAIKYGNDGAASLLVKEGASLNVEE--AGSFLCTAVARGDSDLLKRVLSNGIDPNTRDYDLRTPLHVAASEGLYL 683 (821)
Q Consensus 606 ~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~--~~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~T~Lh~A~~~g~~~ 683 (821)
.|||..||.-|+.+++++|+++|+|++..+ |.|.||.||.+|+.+++++|++.|+|+|.++..|+|+||.|+..|+++
T Consensus 118 StPLraACfDG~leivKyLvE~gad~~IanrhGhTcLmIa~ykGh~~I~qyLle~gADvn~ks~kGNTALH~caEsG~vd 197 (615)
T KOG0508|consen 118 STPLRAACFDGHLEIVKYLVEHGADPEIANRHGHTCLMIACYKGHVDIAQYLLEQGADVNAKSYKGNTALHDCAESGSVD 197 (615)
T ss_pred CccHHHHHhcchhHHHHHHHHcCCCCcccccCCCeeEEeeeccCchHHHHHHHHhCCCcchhcccCchHHHhhhhcccHH
Confidence 899999999999999999999999998865 899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcc
Q 003425 684 MAKLLVEAGASVFPKDRWGNTPLDEGRMCGNKNLIKLLEDAK 725 (821)
Q Consensus 684 ~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~i~~~Ll~~~ 725 (821)
++++|+.+|+.++. |..|.|||..|+..|+.++|++|++..
T Consensus 198 ivq~Ll~~ga~i~~-d~~GmtPL~~Aa~tG~~~iVe~L~~~~ 238 (615)
T KOG0508|consen 198 IVQLLLKHGAKIDV-DGHGMTPLLLAAVTGHTDIVERLLQCE 238 (615)
T ss_pred HHHHHHhCCceeee-cCCCCchHHHHhhhcchHHHHHHhcCC
Confidence 99999999998865 566999999999999999999999743
No 38
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.95 E-value=5.8e-26 Score=269.57 Aligned_cols=186 Identities=20% Similarity=0.218 Sum_probs=165.5
Q ss_pred CCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCChHHHHHHHhcCC
Q 003425 550 GDLYQLEGLIRAGADPNRTDYDGRSPLHLAASRGYEEIMTFLIQKGVDINLKDNFGNTPLLEAIKYGNDGAASLLVKEGA 629 (821)
Q Consensus 550 g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~ 629 (821)
.+.++-..+.+.+.. ..+.++.++||.||..|+.++++.|+++|+|+|..|..|.||||+|+..|+.+++++|+++|+
T Consensus 505 ~~l~v~~ll~~~~~~--~~~~~~~~~L~~Aa~~g~~~~l~~Ll~~G~d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ga 582 (823)
T PLN03192 505 HDLNVGDLLGDNGGE--HDDPNMASNLLTVASTGNAALLEELLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHAC 582 (823)
T ss_pred ccccHHHHHhhcccc--cCCccchhHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHhcCC
Confidence 444455555555443 234567899999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcc--cccchhhHHHhcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHH
Q 003425 630 SLNVE--EAGSFLCTAVARGDSDLLKRVLSNGIDPNTRDYDLRTPLHVAASEGLYLMAKLLVEAGASVFPKDRWGNTPLD 707 (821)
Q Consensus 630 ~~~~~--~~~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~ 707 (821)
+++.. +|.||||.|+..|+.+++++|++.++..+. ..|.+|||.||..|+.++++.|+++|+|+|.+|.+|+||||
T Consensus 583 din~~d~~G~TpL~~A~~~g~~~iv~~L~~~~~~~~~--~~~~~~L~~Aa~~g~~~~v~~Ll~~Gadin~~d~~G~TpLh 660 (823)
T PLN03192 583 NVHIRDANGNTALWNAISAKHHKIFRILYHFASISDP--HAAGDLLCTAAKRNDLTAMKELLKQGLNVDSEDHQGATALQ 660 (823)
T ss_pred CCCCcCCCCCCHHHHHHHhCCHHHHHHHHhcCcccCc--ccCchHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHH
Confidence 99875 489999999999999999999998876654 45789999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHhccccccccCCCC-CCcc
Q 003425 708 EGRMCGNKNLIKLLEDAKSTQLLEFPHG-FQDT 739 (821)
Q Consensus 708 ~A~~~~~~~i~~~Ll~~~a~~~~~~~~~-~~~~ 739 (821)
+|+..|+.+++++|+++||+.+..+..| .++.
T Consensus 661 ~A~~~g~~~iv~~Ll~~GAdv~~~~~~g~~t~~ 693 (823)
T PLN03192 661 VAMAEDHVDMVRLLIMNGADVDKANTDDDFSPT 693 (823)
T ss_pred HHHHCCcHHHHHHHHHcCCCCCCCCCCCCCCHH
Confidence 9999999999999999999999988877 5443
No 39
>PHA02917 ankyrin-like protein; Provisional
Probab=99.94 E-value=1.5e-26 Score=263.38 Aligned_cols=194 Identities=17% Similarity=0.122 Sum_probs=167.2
Q ss_pred cchhhhHhhhHHHHhhc---CCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHH----HHHHHHHcCCCCCCCCCCC
Q 003425 533 SKHEAELALKVNSAAYH---GDLYQLEGLIRAGADPNRTDYDGRSPLHLAASRGYEE----IMTFLIQKGVDINLKDNFG 605 (821)
Q Consensus 533 ~~~~~~~~~~L~~A~~~---g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~g~~~----~v~~Ll~~g~~~~~~~~~g 605 (821)
+..|..|.||||+||.. |+.++|+.|++.|++++..+..|.||||+|+..|+.+ +++.|++.+...+..+.
T Consensus 26 ~~~d~~g~t~Lh~a~~~~~~~~~~~v~~Ll~~ga~v~~~~~~g~TpL~~Aa~~g~~~v~~~~~~~Ll~~~~~~n~~~~-- 103 (661)
T PHA02917 26 DTRNQFKNNALHAYLFNEHCNNVEVVKLLLDSGTNPLHKNWRQLTPLEEYTNSRHVKVNKDIAMALLEATGYSNINDF-- 103 (661)
T ss_pred cccCCCCCcHHHHHHHhhhcCcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCChhHHHHHHHHHHhccCCCCCCCc--
Confidence 45688899999997555 8899999999999999999999999999999999854 56788887554555442
Q ss_pred CcHHHHHHHcCChHHHHHHHhcCCCCCcc--cccchhhHHH--hcCCHHHHHHHHHCCCCCCCCCC---CC---------
Q 003425 606 NTPLLEAIKYGNDGAASLLVKEGASLNVE--EAGSFLCTAV--ARGDSDLLKRVLSNGIDPNTRDY---DL--------- 669 (821)
Q Consensus 606 ~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~--~~~t~l~~A~--~~~~~~~v~~Ll~~g~~~~~~d~---~g--------- 669 (821)
.+++|.|+..++.+++++|+++|++++.+ +|.||||.|+ ..|+.+++++|+++|+++|..|. .|
T Consensus 104 ~~~~~~a~~~~~~e~vk~Ll~~Gadin~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn~~d~~~~~g~~~~~~~~~ 183 (661)
T PHA02917 104 NIFSYMKSKNVDVDLIKVLVEHGFDLSVKCENHRSVIENYVMTDDPVPEIIDLFIENGCSVLYEDEDDEYGYAYDDYQPR 183 (661)
T ss_pred chHHHHHhhcCCHHHHHHHHHcCCCCCccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCcccccccccccccccccccc
Confidence 37788899999999999999999999985 5899999654 57899999999999999987653 34
Q ss_pred --CcHHHHHHH-----------cCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCH--HHHHHHHhcccccc
Q 003425 670 --RTPLHVAAS-----------EGLYLMAKLLVEAGASVFPKDRWGNTPLDEGRMCGNK--NLIKLLEDAKSTQL 729 (821)
Q Consensus 670 --~T~Lh~A~~-----------~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~--~i~~~Ll~~~a~~~ 729 (821)
.||||+|+. .++.+++++|+++|||+|.+|.+|.||||+|+.+|+. +++++|++ |++..
T Consensus 184 ~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gadvn~~d~~G~TpLh~A~~~g~~~~eivk~Li~-g~d~~ 257 (661)
T PHA02917 184 NCGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHGIKPSSIDKNYCTALQYYIKSSHIDIDIVKLLMK-GIDNT 257 (661)
T ss_pred ccccHHHHHHhhcccccccccccCcHHHHHHHHHCCCCcccCCCCCCcHHHHHHHcCCCcHHHHHHHHh-CCccc
Confidence 599999986 4689999999999999999999999999999999985 79999985 77654
No 40
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.94 E-value=5.7e-27 Score=235.72 Aligned_cols=197 Identities=26% Similarity=0.332 Sum_probs=173.0
Q ss_pred HHhhcCCHHHHHHHHHcCCC-----CCCCCCCCCcHHHHHHHcCCHHHHHHHHH-cCCCCCCC--------CCCCCcHHH
Q 003425 545 SAAYHGDLYQLEGLIRAGAD-----PNRTDYDGRSPLHLAASRGYEEIMTFLIQ-KGVDINLK--------DNFGNTPLL 610 (821)
Q Consensus 545 ~A~~~g~~~~v~~Ll~~g~~-----~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~-~g~~~~~~--------~~~g~tpL~ 610 (821)
.|++.|.+..+..|+-...+ +-....+|.|||..||++||.++|++|++ .++++... ...|-+||.
T Consensus 10 naa~~g~l~~l~~ll~~~s~~ei~~l~~~~~~g~tPL~iaaRnGH~~vVeyLle~~~a~~e~~GsV~FDge~IegappLW 89 (615)
T KOG0508|consen 10 NAARDGKLQLLAKLLINSSNEEIISLIGEVQNGGTPLLIAARNGHADVVEYLLEHCRASPEQGGSVRFDGETIEGAPPLW 89 (615)
T ss_pred HHhhhhhHHHHHHHHhCCchHHHHHHhccccCCCCceeeehhcCcHHHHHHHHHHhcCCccCCceEEeCCcccCCCchhh
Confidence 67788888887777754322 11234678899999999999999999999 47776543 346889999
Q ss_pred HHHHcCChHHHHHHHhcCCCCCccc--ccchhhHHHhcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHH
Q 003425 611 EAIKYGNDGAASLLVKEGASLNVEE--AGSFLCTAVARGDSDLLKRVLSNGIDPNTRDYDLRTPLHVAASEGLYLMAKLL 688 (821)
Q Consensus 611 ~A~~~~~~~~v~~Ll~~~~~~~~~~--~~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~T~Lh~A~~~g~~~~v~~L 688 (821)
.|+..||.++|+.|+++|+++|... ..|||-.||..|+.+++++|+++|+|++..|..|.|.||+||..|+.+++++|
T Consensus 90 aAsaAGHl~vVk~L~~~ga~VN~tT~TNStPLraACfDG~leivKyLvE~gad~~IanrhGhTcLmIa~ykGh~~I~qyL 169 (615)
T KOG0508|consen 90 AASAAGHLEVVKLLLRRGASVNDTTRTNSTPLRAACFDGHLEIVKYLVEHGADPEIANRHGHTCLMIACYKGHVDIAQYL 169 (615)
T ss_pred HHhccCcHHHHHHHHHhcCccccccccCCccHHHHHhcchhHHHHHHHHcCCCCcccccCCCeeEEeeeccCchHHHHHH
Confidence 9999999999999999999999754 56999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccCCCCCCccccc
Q 003425 689 VEAGASVFPKDRWGNTPLDEGRMCGNKNLIKLLEDAKSTQLLEFPHGFQDTADK 742 (821)
Q Consensus 689 l~~ga~~~~~d~~g~t~l~~A~~~~~~~i~~~Ll~~~a~~~~~~~~~~~~~~~~ 742 (821)
++.|||+|.++..|+||||.|+..|+.+++++|+++|+...... +|.+|...+
T Consensus 170 le~gADvn~ks~kGNTALH~caEsG~vdivq~Ll~~ga~i~~d~-~GmtPL~~A 222 (615)
T KOG0508|consen 170 LEQGADVNAKSYKGNTALHDCAESGSVDIVQLLLKHGAKIDVDG-HGMTPLLLA 222 (615)
T ss_pred HHhCCCcchhcccCchHHHhhhhcccHHHHHHHHhCCceeeecC-CCCchHHHH
Confidence 99999999999999999999999999999999999999876554 488886543
No 41
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.94 E-value=6.7e-27 Score=212.12 Aligned_cols=201 Identities=23% Similarity=0.270 Sum_probs=184.9
Q ss_pred chhhhHhhhHHHHhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHH
Q 003425 534 KHEAELALKVNSAAYHGDLYQLEGLIRAGADPNRTDYDGRSPLHLAASRGYEEIMTFLIQKGVDINLKDNFGNTPLLEAI 613 (821)
Q Consensus 534 ~~~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~tpL~~A~ 613 (821)
..+++|+.+++.|+-+|+...+..++..|+..|..+..+++|+.+++...+.+.+..+.++ .+|..|..|.|||.+|+
T Consensus 91 ~t~p~g~~~~~v~ap~~s~~k~sttltN~~rgnevs~~p~s~~slsVhql~L~~~~~~~~n--~VN~~De~GfTpLiWAa 168 (296)
T KOG0502|consen 91 ETDPEGWSALLVAAPCGSVDKVSTTLTNGARGNEVSLMPWSPLSLSVHQLHLDVVDLLVNN--KVNACDEFGFTPLIWAA 168 (296)
T ss_pred CCCchhhhhhhhcCCCCCcceeeeeecccccCCccccccCChhhHHHHHHHHHHHHHHhhc--cccCccccCchHhHHHH
Confidence 4566699999999999999999999999999999999999999999999999988777765 68899999999999999
Q ss_pred HcCChHHHHHHHhcCCCCCcc--cccchhhHHHhcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHc
Q 003425 614 KYGNDGAASLLVKEGASLNVE--EAGSFLCTAVARGDSDLLKRVLSNGIDPNTRDYDLRTPLHVAASEGLYLMAKLLVEA 691 (821)
Q Consensus 614 ~~~~~~~v~~Ll~~~~~~~~~--~~~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~ 691 (821)
..|++++|++|++.|++++.. ...++|.+|+..|..++|++|+.++.|+|..|.+|.|||-+|++.|+.+|++.|+..
T Consensus 169 a~G~i~vV~fLL~~GAdp~~lgk~resALsLAt~ggytdiV~lLL~r~vdVNvyDwNGgTpLlyAvrgnhvkcve~Ll~s 248 (296)
T KOG0502|consen 169 AKGHIPVVQFLLNSGADPDALGKYRESALSLATRGGYTDIVELLLTREVDVNVYDWNGGTPLLYAVRGNHVKCVESLLNS 248 (296)
T ss_pred hcCchHHHHHHHHcCCChhhhhhhhhhhHhHHhcCChHHHHHHHHhcCCCcceeccCCCceeeeeecCChHHHHHHHHhc
Confidence 999999999999999999874 467999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccCCCCCC
Q 003425 692 GASVFPKDRWGNTPLDEGRMCGNKNLIKLLEDAKSTQLLEFPHGFQ 737 (821)
Q Consensus 692 ga~~~~~d~~g~t~l~~A~~~~~~~i~~~Ll~~~a~~~~~~~~~~~ 737 (821)
|||++..+..|.++++.|+..|+. +|+..++..+....++..-.+
T Consensus 249 GAd~t~e~dsGy~~mdlAValGyr-~Vqqvie~h~lkl~Q~~~~~~ 293 (296)
T KOG0502|consen 249 GADVTQEDDSGYWIMDLAVALGYR-IVQQVIEKHALKLCQDSEKRT 293 (296)
T ss_pred CCCcccccccCCcHHHHHHHhhhH-HHHHHHHHHHHHHhhcccCCC
Confidence 999999999999999999999998 788888877776666544433
No 42
>PHA02730 ankyrin-like protein; Provisional
Probab=99.94 E-value=1e-25 Score=248.75 Aligned_cols=190 Identities=15% Similarity=0.138 Sum_probs=165.2
Q ss_pred chhhhHhhhHHHHhhcC---CHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcC--CHHHHHHHHHcCC--CCCCCCCCCC
Q 003425 534 KHEAELALKVNSAAYHG---DLYQLEGLIRAGADPNRTDYDGRSPLHLAASRG--YEEIMTFLIQKGV--DINLKDNFGN 606 (821)
Q Consensus 534 ~~~~~~~~~L~~A~~~g---~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~g--~~~~v~~Ll~~g~--~~~~~~~~g~ 606 (821)
..|.+|.||||+|+..| +.++|+.|+++|+|++.+|..|+||||+|+..+ +.+++++|+++|+ +++..+..+.
T Consensus 36 ~kd~~G~TaLh~A~~~~~~~~~eivklLLs~GAdin~kD~~G~TPLh~Aa~~~~~~~eIv~~Ll~~~~~~~~~~~~~~~d 115 (672)
T PHA02730 36 HIDRRGNNALHCYVSNKCDTDIKIVRLLLSRGVERLCRNNEGLTPLGVYSKRKYVKSQIVHLLISSYSNASNELTSNIND 115 (672)
T ss_pred hcCCCCCcHHHHHHHcCCcCcHHHHHHHHhCCCCCcccCCCCCChHHHHHHcCCCcHHHHHHHHhcCCCCCcccccccCC
Confidence 66778999999999997 599999999999999999999999999999976 7999999999965 4577787799
Q ss_pred cHHHHHHH--cCChHHHHHHHh-cCCCCCcc-------cccchhhHHHhcCCHHHHHHHHHCCCCCC-------CCCCCC
Q 003425 607 TPLLEAIK--YGNDGAASLLVK-EGASLNVE-------EAGSFLCTAVARGDSDLLKRVLSNGIDPN-------TRDYDL 669 (821)
Q Consensus 607 tpL~~A~~--~~~~~~v~~Ll~-~~~~~~~~-------~~~t~l~~A~~~~~~~~v~~Ll~~g~~~~-------~~d~~g 669 (821)
+|||.++. +++.+++++|++ .+++++.. .|.+|+++|...++.++|++|+++|++++ ..+..+
T Consensus 116 ~~l~~y~~s~n~~~~~vk~Li~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~eIvklLi~~g~~v~g~~~~~~~~~~~~ 195 (672)
T PHA02730 116 FDLYSYMSSDNIDLRLLKYLIVDKRIRPSKNTNYYIHCLGLVDIYVTTPNPRPEVLLWLLKSECYSTGYVFRSCMYDSDR 195 (672)
T ss_pred chHHHHHHhcCCcHHHHHHHHHhcCCChhhhhhhhccccchhhhhHhcCCCchHHHHHHHHcCCcccccccccccccCCc
Confidence 99999998 899999999996 66776654 46799999999999999999999999995 234445
Q ss_pred C-cHHHHH------HHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHH--HHHcCCHHHHHHHHh
Q 003425 670 R-TPLHVA------ASEGLYLMAKLLVEAGASVFPKDRWGNTPLDE--GRMCGNKNLIKLLED 723 (821)
Q Consensus 670 ~-T~Lh~A------~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~--A~~~~~~~i~~~Ll~ 723 (821)
. |.||++ ...++.+++++|+++|||+|.+|.+|.||||+ |...|+.|++++|++
T Consensus 196 c~~~l~~~il~~~~~~~n~~eiv~lLIs~GadIN~kd~~G~TpLh~~~~~~~~~~eiv~~Li~ 258 (672)
T PHA02730 196 CKNSLHYYILSHRESESLSKDVIKCLIDNNVSIHGRDEGGSLPIQYYWSCSTIDIEIVKLLIK 258 (672)
T ss_pred cchhHHHHHHhhhhhhccCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCcccHHHHHHHHh
Confidence 5 445533 45678999999999999999999999999995 555677999999999
No 43
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.94 E-value=1.1e-25 Score=221.74 Aligned_cols=173 Identities=20% Similarity=0.189 Sum_probs=155.6
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcC--ChHHHHHHHhcCCCCCcc---cccchhhHH
Q 003425 569 DYDGRSPLHLAASRGYEEIMTFLIQKGVDINLKDNFGNTPLLEAIKYG--NDGAASLLVKEGASLNVE---EAGSFLCTA 643 (821)
Q Consensus 569 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~tpL~~A~~~~--~~~~v~~Ll~~~~~~~~~---~~~t~l~~A 643 (821)
...+.||||+|+..|+.++++.|++. ++..|..|.||||+|+..+ +.+++++|+++|++++.. .|.||||.|
T Consensus 18 ~~~~~~pL~~A~~~~~~~~vk~Li~~---~n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~~~~~~g~TpLh~a 94 (209)
T PHA02859 18 FYRYCNPLFYYVEKDDIEGVKKWIKF---VNDCNDLYETPIFSCLEKDKVNVEILKFLIENGADVNFKTRDNNLSALHHY 94 (209)
T ss_pred hhccCcHHHHHHHhCcHHHHHHHHHh---hhccCccCCCHHHHHHHcCCCCHHHHHHHHHCCCCCCccCCCCCCCHHHHH
Confidence 35679999999999999999999986 5677889999999999855 899999999999999875 478999998
Q ss_pred Hhc---CCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHH--cCcHHHHHHHHHcCCCCCCCCCCCCCHHHH-HHHcCCHHH
Q 003425 644 VAR---GDSDLLKRVLSNGIDPNTRDYDLRTPLHVAAS--EGLYLMAKLLVEAGASVFPKDRWGNTPLDE-GRMCGNKNL 717 (821)
Q Consensus 644 ~~~---~~~~~v~~Ll~~g~~~~~~d~~g~T~Lh~A~~--~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~-A~~~~~~~i 717 (821)
+.. ++.+++++|+++|+++|.+|..|.||||.|+. .++.+++++|+++|++++.+|..|.||||. |+..++.++
T Consensus 95 ~~~~~~~~~eiv~~Ll~~gadin~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadin~~d~~g~t~Lh~~a~~~~~~~i 174 (209)
T PHA02859 95 LSFNKNVEPEILKILIDSGSSITEEDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFLNKDFDNNNILYSYILFHSDKKI 174 (209)
T ss_pred HHhCccccHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCcccccCCCCcHHHHHHHhcCCHHH
Confidence 764 47999999999999999999999999999986 468999999999999999999999999995 567889999
Q ss_pred HHHHHhccccccccCCCCCCccccccC
Q 003425 718 IKLLEDAKSTQLLEFPHGFQDTADKRN 744 (821)
Q Consensus 718 ~~~Ll~~~a~~~~~~~~~~~~~~~~~~ 744 (821)
+++|+++|+++..++..|.++.+.+..
T Consensus 175 v~~Ll~~Gadi~~~d~~g~tpl~la~~ 201 (209)
T PHA02859 175 FDFLTSLGIDINETNKSGYNCYDLIKF 201 (209)
T ss_pred HHHHHHcCCCCCCCCCCCCCHHHHHhh
Confidence 999999999999999999888765543
No 44
>PHA02792 ankyrin-like protein; Provisional
Probab=99.93 E-value=4.3e-25 Score=241.08 Aligned_cols=234 Identities=15% Similarity=0.088 Sum_probs=189.1
Q ss_pred HHHHHhc-CCcchhhhhhhcccccccccchhhhHhhhHHHHhh-cCCHHHHHHHHHcCCCCC------------------
Q 003425 507 VLTNLLQ-GKESDLRLKQLQSDITFHISKHEAELALKVNSAAY-HGDLYQLEGLIRAGADPN------------------ 566 (821)
Q Consensus 507 ~l~~~l~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~A~~-~g~~~~v~~Ll~~g~~~n------------------ 566 (821)
+++.+.. ..+.+....+..++. +++..+..+.+++|+|+. .|+.+++++|+++|+|++
T Consensus 74 ~~~~~~s~n~~lElvk~LI~~GA--dvN~~~n~~~~~l~ya~~~~~~~eivk~Ll~~Gad~~~~~~~g~~~~~~~~~~~~ 151 (631)
T PHA02792 74 IFEYLCSDNIDIELLKLLISKGL--EINSIKNGINIVEKYATTSNPNVDVFKLLLDKGIPTCSNIQYGYKIIIEQITRAE 151 (631)
T ss_pred HHHHHHHhcccHHHHHHHHHcCC--CcccccCCCCcceeEeecCCCChHHHHHHHHCCCCcccccccCcchhhhhccccc
Confidence 4544444 333445555566555 444556678999999966 699999999999998742
Q ss_pred ------------------CCCCCCCcHHHHHHHcC-------CHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcC--ChH
Q 003425 567 ------------------RTDYDGRSPLHLAASRG-------YEEIMTFLIQKGVDINLKDNFGNTPLLEAIKYG--NDG 619 (821)
Q Consensus 567 ------------------~~d~~g~t~L~~A~~~g-------~~~~v~~Ll~~g~~~~~~~~~g~tpL~~A~~~~--~~~ 619 (821)
..|..|.||||+|+.++ +.++++.|+++|++++..|..|.||||+|+.+. ..+
T Consensus 152 ~~~~~~~~~~~~~~~~i~~~~~~g~t~L~~~i~~~s~~~~~~~~~v~k~Li~~g~~~~~~d~~g~t~l~~~~~~~~i~~e 231 (631)
T PHA02792 152 YYNWDDELDDYDYDYTTDYDDRMGKTVLYYYIITRSQDGYATSLDVINYLISHEKEMRYYTYREHTTLYYYVDKCDIKRE 231 (631)
T ss_pred ccchhhhccccccccccccCCCCCCchHHHHHhhCCcccccCCHHHHHHHHhCCCCcCccCCCCChHHHHHHHcccchHH
Confidence 23456999999999999 899999999999999999999999999999988 666
Q ss_pred HHHHHHhc------------------------------------------------------------------------
Q 003425 620 AASLLVKE------------------------------------------------------------------------ 627 (821)
Q Consensus 620 ~v~~Ll~~------------------------------------------------------------------------ 627 (821)
++++|++.
T Consensus 232 i~~~L~~~~~~~~~~~~~l~~y~~~~~~~~~~~id~~iv~~ll~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~q~~l~ 311 (631)
T PHA02792 232 IFDALFDSNYSGNELMNILSNYLRKQYRNKNHKIDNYIVDKLLSGHDTFYILELCNSLRNNIIISSILKRYTDSIQDLLS 311 (631)
T ss_pred HHHHHHhccccccchHhHHHHHHHHHhccCccCccHHHHHHHHhCCCccchhhhhhhhhhhhHHHHHHHHHhHHHHHHHH
Confidence 77666542
Q ss_pred -------------------CCCCCcccccchhhHHHhcCCHHHHHHHHHCCCCCCCCCCCC--CcHHHHHHHcCcH---H
Q 003425 628 -------------------GASLNVEEAGSFLCTAVARGDSDLLKRVLSNGIDPNTRDYDL--RTPLHVAASEGLY---L 683 (821)
Q Consensus 628 -------------------~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g--~T~Lh~A~~~g~~---~ 683 (821)
|++.........++.|+..|+.+++++|+++|++++.+|..| .||||.|+..+.. +
T Consensus 312 ~Yl~~~~v~ieiIK~LId~Ga~~~r~~~~n~~~~Aa~~gn~eIVelLIs~GADIN~kD~~g~~~TpLh~A~~n~~~~v~~ 391 (631)
T PHA02792 312 EYVSYHTVYINVIKCMIDEGATLYRFKHINKYFQKFDNRDPKVVEYILKNGNVVVEDDDNIINIMPLFPTLSIHESDVLS 391 (631)
T ss_pred HHHhcCCccHHHHHHHHHCCCccccCCcchHHHHHHHcCCHHHHHHHHHcCCchhhhcCCCCChhHHHHHHHhccHhHHH
Confidence 111110112234778899999999999999999999998775 6999998876654 4
Q ss_pred HHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccCCCCCCccccc
Q 003425 684 MAKLLVEAGASVFPKDRWGNTPLDEGRMCGNKNLIKLLEDAKSTQLLEFPHGFQDTADK 742 (821)
Q Consensus 684 ~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~i~~~Ll~~~a~~~~~~~~~~~~~~~~ 742 (821)
++++|+++|||+|.+|..|+||||+|+..++.+++++|+++|++.+..+..|.++...+
T Consensus 392 IlklLIs~GADIN~kD~~G~TPLh~Aa~~~n~eivelLLs~GADIN~kD~~G~TpL~~A 450 (631)
T PHA02792 392 ILKLCKPYIDDINKIDKHGRSILYYCIESHSVSLVEWLIDNGADINITTKYGSTCIGIC 450 (631)
T ss_pred HHHHHHhcCCccccccccCcchHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHH
Confidence 68999999999999999999999999999999999999999999999999998887654
No 45
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.93 E-value=2.2e-26 Score=263.21 Aligned_cols=196 Identities=35% Similarity=0.408 Sum_probs=156.3
Q ss_pred ccchhhhHhhhHHHHhhcC-CHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHH
Q 003425 532 ISKHEAELALKVNSAAYHG-DLYQLEGLIRAGADPNRTDYDGRSPLHLAASRGYEEIMTFLIQKGVDINLKDNFGNTPLL 610 (821)
Q Consensus 532 ~~~~~~~~~~~L~~A~~~g-~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~tpL~ 610 (821)
.+..+..|.|++|.|+..| ..+....+++.|+++|.....|.||||.|+..|+.++++.|++.++..+.....|.+++|
T Consensus 433 ~~~~~~lG~T~lhvaa~~g~~~~~~~~l~~~g~~~n~~s~~G~T~Lhlaaq~Gh~~~~~llle~~~~~~~~~~~~l~~lh 512 (1143)
T KOG4177|consen 433 PNAKAKLGYTPLHVAAKKGRYLQIARLLLQYGADPNAVSKQGFTPLHLAAQEGHTEVVQLLLEGGANDNLDAKKGLTPLH 512 (1143)
T ss_pred hhhHhhcCCChhhhhhhcccHhhhhhhHhhcCCCcchhccccCcchhhhhccCCchHHHHhhhcCCccCccchhccchhh
Confidence 3445556677777777777 667777777777777777777777777777777777777777777777777777777777
Q ss_pred HHHHcCChHHHHHHHhcCCCCCccc--ccchhhHHHhcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHH
Q 003425 611 EAIKYGNDGAASLLVKEGASLNVEE--AGSFLCTAVARGDSDLLKRVLSNGIDPNTRDYDLRTPLHVAASEGLYLMAKLL 688 (821)
Q Consensus 611 ~A~~~~~~~~v~~Ll~~~~~~~~~~--~~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~T~Lh~A~~~g~~~~v~~L 688 (821)
.|...+...+++.++++|++++..+ +.||||.||..|+.++|++|+++|+|++.+|+.|+||||.||..|+.+|+++|
T Consensus 513 la~~~~~v~~~~~l~~~ga~v~~~~~r~~TpLh~A~~~g~v~~VkfLLe~gAdv~ak~~~G~TPLH~Aa~~G~~~i~~LL 592 (1143)
T KOG4177|consen 513 LAADEDTVKVAKILLEHGANVDLRTGRGYTPLHVAVHYGNVDLVKFLLEHGADVNAKDKLGYTPLHQAAQQGHNDIAELL 592 (1143)
T ss_pred hhhhhhhHHHHHHHhhcCCceehhcccccchHHHHHhcCCchHHHHhhhCCccccccCCCCCChhhHHHHcChHHHHHHH
Confidence 7777777777777777777777654 55888888888888888888888888888888888888888888888888888
Q ss_pred HHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcccc
Q 003425 689 VEAGASVFPKDRWGNTPLDEGRMCGNKNLIKLLEDAKST 727 (821)
Q Consensus 689 l~~ga~~~~~d~~g~t~l~~A~~~~~~~i~~~Ll~~~a~ 727 (821)
+++||++|..|.+|.|||++|+..|+.+++++|+..+++
T Consensus 593 lk~GA~vna~d~~g~TpL~iA~~lg~~~~~k~l~~~~~~ 631 (1143)
T KOG4177|consen 593 LKHGASVNAADLDGFTPLHIAVRLGYLSVVKLLKVVTAT 631 (1143)
T ss_pred HHcCCCCCcccccCcchhHHHHHhcccchhhHHHhccCc
Confidence 888888888888888888888888888888888888888
No 46
>PHA02917 ankyrin-like protein; Provisional
Probab=99.93 E-value=4.4e-25 Score=251.41 Aligned_cols=192 Identities=18% Similarity=0.161 Sum_probs=168.5
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCcHHHHHHHc---CCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCChH----HHHHH
Q 003425 552 LYQLEGLIRAGADPNRTDYDGRSPLHLAASR---GYEEIMTFLIQKGVDINLKDNFGNTPLLEAIKYGNDG----AASLL 624 (821)
Q Consensus 552 ~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~---g~~~~v~~Ll~~g~~~~~~~~~g~tpL~~A~~~~~~~----~v~~L 624 (821)
++.++.|+..|..++.+|.+|+||||+||.. |+.+++++|+++|++++..+..|.||||+|+..|+.+ +++.|
T Consensus 12 ~~~~~~l~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~v~~Ll~~ga~v~~~~~~g~TpL~~Aa~~g~~~v~~~~~~~L 91 (661)
T PHA02917 12 LDELKQMLRDRDPNDTRNQFKNNALHAYLFNEHCNNVEVVKLLLDSGTNPLHKNWRQLTPLEEYTNSRHVKVNKDIAMAL 91 (661)
T ss_pred HHHHHHHHhccCcccccCCCCCcHHHHHHHhhhcCcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCChhHHHHHHHHH
Confidence 5778999999999999999999999998655 8899999999999999999999999999999999854 56788
Q ss_pred HhcCCCCCcccccchhhHHHhcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHH--HcCcHHHHHHHHHcCCCCCCCCC--
Q 003425 625 VKEGASLNVEEAGSFLCTAVARGDSDLLKRVLSNGIDPNTRDYDLRTPLHVAA--SEGLYLMAKLLVEAGASVFPKDR-- 700 (821)
Q Consensus 625 l~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~T~Lh~A~--~~g~~~~v~~Ll~~ga~~~~~d~-- 700 (821)
++.+...+..+..++++.|+.+++.+++++|+++|+|+|.+|..|.||||.|+ ..|+.+++++|+++||+++.+|.
T Consensus 92 l~~~~~~n~~~~~~~~~~a~~~~~~e~vk~Ll~~Gadin~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn~~d~~~ 171 (661)
T PHA02917 92 LEATGYSNINDFNIFSYMKSKNVDVDLIKVLVEHGFDLSVKCENHRSVIENYVMTDDPVPEIIDLFIENGCSVLYEDEDD 171 (661)
T ss_pred HhccCCCCCCCcchHHHHHhhcCCHHHHHHHHHcCCCCCccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCcccccccc
Confidence 88754455555567888899999999999999999999999999999999654 57899999999999999987653
Q ss_pred -CC-----------CCHHHHHHH-----------cCCHHHHHHHHhccccccccCCCCCCcccccc
Q 003425 701 -WG-----------NTPLDEGRM-----------CGNKNLIKLLEDAKSTQLLEFPHGFQDTADKR 743 (821)
Q Consensus 701 -~g-----------~t~l~~A~~-----------~~~~~i~~~Ll~~~a~~~~~~~~~~~~~~~~~ 743 (821)
.| .||||+|+. .++.+++++|+++|++.+..+..|.+|.+...
T Consensus 172 ~~g~~~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gadvn~~d~~G~TpLh~A~ 237 (661)
T PHA02917 172 EYGYAYDDYQPRNCGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHGIKPSSIDKNYCTALQYYI 237 (661)
T ss_pred ccccccccccccccccHHHHHHhhcccccccccccCcHHHHHHHHHCCCCcccCCCCCCcHHHHHH
Confidence 34 599999986 46899999999999999999999999887443
No 47
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.92 E-value=2.8e-25 Score=254.30 Aligned_cols=211 Identities=30% Similarity=0.363 Sum_probs=201.8
Q ss_pred ccchhhhHhhhHHHHhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcC-CHHHHHHHHHcCCCCCCCCCCCCcHHH
Q 003425 532 ISKHEAELALKVNSAAYHGDLYQLEGLIRAGADPNRTDYDGRSPLHLAASRG-YEEIMTFLIQKGVDINLKDNFGNTPLL 610 (821)
Q Consensus 532 ~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~g-~~~~v~~Ll~~g~~~~~~~~~g~tpL~ 610 (821)
.+.....|.||||.|+..++.++++.+++.|++++..+..|.||+|.|+..| ..+++..+++.|+++|.....|.||||
T Consensus 400 ~~~~gk~gvTplh~aa~~~~~~~v~l~l~~gA~~~~~~~lG~T~lhvaa~~g~~~~~~~~l~~~g~~~n~~s~~G~T~Lh 479 (1143)
T KOG4177|consen 400 PNSAGKNGVTPLHVAAHYGNPRVVKLLLKRGASPNAKAKLGYTPLHVAAKKGRYLQIARLLLQYGADPNAVSKQGFTPLH 479 (1143)
T ss_pred cccCCCCCcceeeehhhccCcceEEEEeccCCChhhHhhcCCChhhhhhhcccHhhhhhhHhhcCCCcchhccccCcchh
Confidence 6678889999999999999999999999999999999999999999999999 899999999999999999999999999
Q ss_pred HHHHcCChHHHHHHHhcCCCCCc--ccccchhhHHHhcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHH
Q 003425 611 EAIKYGNDGAASLLVKEGASLNV--EEAGSFLCTAVARGDSDLLKRVLSNGIDPNTRDYDLRTPLHVAASEGLYLMAKLL 688 (821)
Q Consensus 611 ~A~~~~~~~~v~~Ll~~~~~~~~--~~~~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~T~Lh~A~~~g~~~~v~~L 688 (821)
.|+..|+.+++..|++.++..+. ..+-+++|.|...+...+++.++++|++++.++..|.||||.||.+|+.++|++|
T Consensus 480 laaq~Gh~~~~~llle~~~~~~~~~~~~l~~lhla~~~~~v~~~~~l~~~ga~v~~~~~r~~TpLh~A~~~g~v~~VkfL 559 (1143)
T KOG4177|consen 480 LAAQEGHTEVVQLLLEGGANDNLDAKKGLTPLHLAADEDTVKVAKILLEHGANVDLRTGRGYTPLHVAVHYGNVDLVKFL 559 (1143)
T ss_pred hhhccCCchHHHHhhhcCCccCccchhccchhhhhhhhhhHHHHHHHhhcCCceehhcccccchHHHHHhcCCchHHHHh
Confidence 99999999999999999865554 4588999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccCCCCCCccccc
Q 003425 689 VEAGASVFPKDRWGNTPLDEGRMCGNKNLIKLLEDAKSTQLLEFPHGFQDTADK 742 (821)
Q Consensus 689 l~~ga~~~~~d~~g~t~l~~A~~~~~~~i~~~Ll~~~a~~~~~~~~~~~~~~~~ 742 (821)
+++|||++.+++.|+||||.|+..|+.+|+.+|+++||+++..+..|.++....
T Consensus 560 Le~gAdv~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~GA~vna~d~~g~TpL~iA 613 (1143)
T KOG4177|consen 560 LEHGADVNAKDKLGYTPLHQAAQQGHNDIAELLLKHGASVNAADLDGFTPLHIA 613 (1143)
T ss_pred hhCCccccccCCCCCChhhHHHHcChHHHHHHHHHcCCCCCcccccCcchhHHH
Confidence 999999999999999999999999999999999999999999999999998744
No 48
>PHA02795 ankyrin-like protein; Provisional
Probab=99.92 E-value=8.2e-25 Score=230.65 Aligned_cols=184 Identities=16% Similarity=0.114 Sum_probs=170.8
Q ss_pred HHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC------CCCCCCCcHHHHHHH--cCChHHHHHHHh
Q 003425 555 LEGLIRAGADPNRTDYDGRSPLHLAASRGYEEIMTFLIQKGVDIN------LKDNFGNTPLLEAIK--YGNDGAASLLVK 626 (821)
Q Consensus 555 v~~Ll~~g~~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~------~~~~~g~tpL~~A~~--~~~~~~v~~Ll~ 626 (821)
-++++.+|+++|..+.+| +|+..+..+++++|+.+|++++ .++..++|+||+|+. .|+.+++++|++
T Consensus 65 ~~~~~~~~~~i~~~~~~~-----~~~~~~~k~~~~~l~s~~~~~~~~~~~~~~~~~~~~~L~~~~~n~~n~~eiV~~LI~ 139 (437)
T PHA02795 65 YDYFRIHRDNIDQYIVDR-----LFAYITYKDIISALVSKNYMEDIFSIIIKNCNSVQDLLLYYLSNAYVEIDIVDFMVD 139 (437)
T ss_pred HHHHHHcCcchhhhhhhh-----HHhhcchHHHHHHHHhcccccchhhhhhhccccccHHHHHHHHhcCCCHHHHHHHHH
Confidence 578889999999988887 8999999999999999999999 788899999999999 899999999999
Q ss_pred cCCCCCcccccchhhHHHhcCCHHHHHHHHHCCCCCCCCC------CCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCC
Q 003425 627 EGASLNVEEAGSFLCTAVARGDSDLLKRVLSNGIDPNTRD------YDLRTPLHVAASEGLYLMAKLLVEAGASVFPKDR 700 (821)
Q Consensus 627 ~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~d------~~g~T~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~ 700 (821)
+||+++..++.||+|.|+..++.+++++|+++|++.+... ..|.||+|.|+..++.+++++|+++|||+|.+|.
T Consensus 140 ~GADIn~~~~~t~lh~A~~~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~GADIN~kD~ 219 (437)
T PHA02795 140 HGAVIYKIECLNAYFRGICKKESSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPYIEDINQLDA 219 (437)
T ss_pred CCCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHHHHHhCcCCcCcCCC
Confidence 9999999888999999999999999999999998543222 3488999999999999999999999999999999
Q ss_pred CCCCHHHHHHHcCCHHHHHHHHhccccccccCCCCCCcccccc
Q 003425 701 WGNTPLDEGRMCGNKNLIKLLEDAKSTQLLEFPHGFQDTADKR 743 (821)
Q Consensus 701 ~g~t~l~~A~~~~~~~i~~~Ll~~~a~~~~~~~~~~~~~~~~~ 743 (821)
.|.||||+|+..|+.+++++|+++||+.+..+..|.++.+.+.
T Consensus 220 ~G~TpLh~Aa~~g~~eiVelLL~~GAdIN~~d~~G~TpLh~Aa 262 (437)
T PHA02795 220 GGRTLLYRAIYAGYIDLVSWLLENGANVNAVMSNGYTCLDVAV 262 (437)
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHH
Confidence 9999999999999999999999999999999999999987554
No 49
>PHA02730 ankyrin-like protein; Provisional
Probab=99.92 E-value=4e-24 Score=236.19 Aligned_cols=194 Identities=15% Similarity=0.091 Sum_probs=128.5
Q ss_pred hhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHH--HHHcCCHHHHHHHHH-------------------------------
Q 003425 547 AYHGDLYQLEGLIRAGADPNRTDYDGRSPLHL--AASRGYEEIMTFLIQ------------------------------- 593 (821)
Q Consensus 547 ~~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~--A~~~g~~~~v~~Ll~------------------------------- 593 (821)
...++.++++.|+++|+|+|.+|.+|.||||+ |+..|+.|++++|++
T Consensus 210 ~~~n~~eiv~lLIs~GadIN~kd~~G~TpLh~~~~~~~~~~eiv~~Li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (672)
T PHA02730 210 SESLSKDVIKCLIDNNVSIHGRDEGGSLPIQYYWSCSTIDIEIVKLLIKDVDTCSVYDDISQPYIRGVLADYLNKRFRVT 289 (672)
T ss_pred hhccCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCcccHHHHHHHHhccccccccccccchhhhhhHHHhhhhhhhcc
Confidence 34567777777777777777777777777774 444556777777777
Q ss_pred -cCCCCCC--------------------CCCCCCc---------------------HHHHHHHcC---ChHHHHHHHhcC
Q 003425 594 -KGVDINL--------------------KDNFGNT---------------------PLLEAIKYG---NDGAASLLVKEG 628 (821)
Q Consensus 594 -~g~~~~~--------------------~~~~g~t---------------------pL~~A~~~~---~~~~v~~Ll~~~ 628 (821)
+|+|... .+..|.+ .||.-...+ +.+++++|+++|
T Consensus 290 ~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~i~~~~~~~~~~~~q~~l~~Y~~~~~~v~ieIvelLIs~G 369 (672)
T PHA02730 290 PYNVDMEIVNLLIEGRHTLIDVMRSITSYDSREYNHYIIDNILKRFRQQDESIVQAMLINYLHYGDMVSIPILRCMLDNG 369 (672)
T ss_pred cCCcchHHHHHHhhccCcchhhhhccccccccccchhHHHHHHHhhhccchhHHHHHHHHHHhcCCcCcHHHHHHHHHCC
Confidence 5666544 3444543 455545544 467777777777
Q ss_pred CCCCcc-cccchhhHHHhcCC----HHHHHHHHHCCC--CCCCCCCCCCcHHHH---HHHcC---------cHHHHHHHH
Q 003425 629 ASLNVE-EAGSFLCTAVARGD----SDLLKRVLSNGI--DPNTRDYDLRTPLHV---AASEG---------LYLMAKLLV 689 (821)
Q Consensus 629 ~~~~~~-~~~t~l~~A~~~~~----~~~v~~Ll~~g~--~~~~~d~~g~T~Lh~---A~~~g---------~~~~v~~Ll 689 (821)
++++.. .|.||||.|+..++ .+++++|+++|+ ++|.+|..|.||||. |...+ ..+++++|+
T Consensus 370 AdIN~k~~G~TpLH~Aa~~nnn~i~~eIvelLIs~Ga~~dIN~kd~~G~T~Lh~~i~a~~~n~~~~~~e~~~~~ivk~LI 449 (672)
T PHA02730 370 ATMDKTTDNNYPLHDYFVNNNNIVDVNVVRFIVENNGHMAINHVSNNGRLCMYGLILSRFNNCGYHCYETILIDVFDILS 449 (672)
T ss_pred CCCCcCCCCCcHHHHHHHHcCCcchHHHHHHHHHcCCCccccccccCCCchHhHHHHHHhccccccccchhHHHHHHHHH
Confidence 777654 36677777776664 677777777776 467777777777763 22221 124577777
Q ss_pred HcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccCC-CCCCccc
Q 003425 690 EAGASVFPKDRWGNTPLDEGRMCGNKNLIKLLEDAKSTQLLEFP-HGFQDTA 740 (821)
Q Consensus 690 ~~ga~~~~~d~~g~t~l~~A~~~~~~~i~~~Ll~~~a~~~~~~~-~~~~~~~ 740 (821)
++|||+|.+|..|+||||+|+..++.+++++|+++||+++..+. .|.++..
T Consensus 450 s~GADINakD~~G~TPLh~Aa~~~~~eive~LI~~GAdIN~~d~~~g~TaL~ 501 (672)
T PHA02730 450 KYMDDIDMIDNENKTLLYYAVDVNNIQFARRLLEYGASVNTTSRSIINTAIQ 501 (672)
T ss_pred hcccchhccCCCCCCHHHHHHHhCCHHHHHHHHHCCCCCCCCCCcCCcCHHH
Confidence 77777777777777777777777777777777777777776665 3555554
No 50
>KOG1419 consensus Voltage-gated K+ channel KCNQ [Inorganic ion transport and metabolism]
Probab=99.92 E-value=1.3e-25 Score=230.63 Aligned_cols=273 Identities=16% Similarity=0.184 Sum_probs=202.3
Q ss_pred CcccccccccCCcCeEEcCCChhHHHHHHHHHHHHHHHhhhcceeeeeecC---CCcCeehhHHHHHHHHHHhHhheeeE
Q 003425 50 RQSVLSGFRHFSRNLVFHPDNRWYRAWTKFILIWAVYSSIFTPVEFGFFRG---LSKNLYVLDIVGQIAFLFDIVLQFCL 126 (821)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~P~s~~~~~w~~~~~~~~~~~~~~~p~~~~f~~~---~~~~~~~~~~~~~~~f~~Di~l~f~t 126 (821)
++.++++.|.+.+++++.|.+.....+..+++++++.++++..+. .+.+. ....++++|+++.++|.+|+++|+|.
T Consensus 70 Rn~r~Rr~q~~vYN~LERPrGWkaf~YH~~VFllVl~CLILsV~S-Ti~e~~~~a~~~L~~LEiv~IV~Fg~EfivRlWS 148 (654)
T KOG1419|consen 70 RNARYRRIQNKVYNFLERPRGWKAFLYHFFVFLLVLSCLILSVLS-TIEEYEKLASGILYILEIVMIVFFGLEFIVRLWS 148 (654)
T ss_pred hhHHHHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHhc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 336677888899999999999877777777666655555544433 33322 23458899999999999999999988
Q ss_pred EEEeC----CceEEeeccHHHHHHHhhhhh-HHHHHhhhhHHHHHhhc--C---chhHHHHHHHHHHHHHHHHHHHHHhh
Q 003425 127 AYRDS----QTYRLICKRTPIALRYLRSSF-IIDLFSCMPWDLIYKAS--G---RKEAVRYLLWIRLYRVRKVSQFFHKM 196 (821)
Q Consensus 127 ~y~~~----~~~~~v~~~~~I~~~Ylk~~f-~iDlis~lP~~~~~~~~--~---~~~~~~~l~llrl~rl~r~~~~~~~~ 196 (821)
+-+.- -.|+ .+|.+..| +||++.++....++... + ....++-||++.++|++|+.+....|
T Consensus 149 AGC~~rYrG~~GR---------LrFarkp~cvIDiivi~Asi~vl~~g~qG~vfatSalrslRFlQILRmlr~DRrggTW 219 (654)
T KOG1419|consen 149 AGCCCRYRGWYGR---------LRFARKPFCVIDIIVIIASIAVLAAGSQGNVFATSALRSLRFLQILRMLRMDRRGGTW 219 (654)
T ss_pred cccccccccceee---------EEeecCCceEEEEeeeeeeeeEEEecCccceeehhhhhhhHHHHHHHHHHhhccCchh
Confidence 74332 1122 56777765 89998766543333222 1 23568899999999999999988888
Q ss_pred hhhHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCceeccccCCCCCcccccccchHHHHHHHHHHHHHH
Q 003425 197 EKDIRINYMFSRIVKLIAVELYCSHIAACIFYYLATTLPPEQEGYTWIGSLKMGDYSYADFREIGFWKSYITSMYASVVT 276 (821)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~l~~~h~~ac~~~~i~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~Y~~s~yw~~~t 276 (821)
+-...+-+...+-+....++.|+..+++..+.|++.....+.+. .+-|..|.+|+||+++|
T Consensus 220 KLLGSvV~aH~~ELiTt~YIGFL~LIfsSflVYLaEKd~~~e~~-------------------n~~F~TyADALWWG~IT 280 (654)
T KOG1419|consen 220 KLLGSVVYAHSKELITTWYIGFLVLIFSSFLVYLAEKDAQGEGT-------------------NDEFPTYADALWWGVIT 280 (654)
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccc-------------------cccchhHHHHHHhhhee
Confidence 77777777887888888899999999998888887654333221 12267899999999999
Q ss_pred hhccccCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 003425 277 MTTVGYGDVHAVNLREMVFIMIYVSFDMILGAYLIGNMTALIVKGSKTEKFRDKMTDLMKYINRNRLGRDIRDQIIGHLR 356 (821)
Q Consensus 277 ~tTvGyGdi~p~t~~e~~~~~~~~i~g~~~~a~~i~~i~~~~~~~~~~~~~~~~~~~~~~~m~~~~lp~~l~~ri~~y~~ 356 (821)
+|||||||.+|+|+.+++++.++.++|+.+||++-|++++-+.-..++++-| ++|-++++.-..|.+-..+||.
T Consensus 281 ltTIGYGDk~P~TWlGr~laa~fsligiSFFALPAGILGSGfALKVQeq~RQ------KHf~rrr~pAA~LIQc~WR~ya 354 (654)
T KOG1419|consen 281 LTTIGYGDKTPQTWLGRLLAACFSLIGISFFALPAGILGSGFALKVQEQHRQ------KHFNRRRNPAASLIQCAWRYYA 354 (654)
T ss_pred EEeeccCCcCcccchhHHHHHHHHHHHHHHHhcccccccchhhhhhHHHHHH------HHHHhhcchHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999988764422222212 3455666666677777777765
Q ss_pred H
Q 003425 357 L 357 (821)
Q Consensus 357 ~ 357 (821)
-
T Consensus 355 a 355 (654)
T KOG1419|consen 355 A 355 (654)
T ss_pred c
Confidence 3
No 51
>PHA02792 ankyrin-like protein; Provisional
Probab=99.91 E-value=2.2e-23 Score=227.81 Aligned_cols=200 Identities=14% Similarity=0.104 Sum_probs=163.9
Q ss_pred ccccccchhhhHhhhHHHHhhcC-------CHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcC--CHHHHHHHHH-----
Q 003425 528 ITFHISKHEAELALKVNSAAYHG-------DLYQLEGLIRAGADPNRTDYDGRSPLHLAASRG--YEEIMTFLIQ----- 593 (821)
Q Consensus 528 ~~~~~~~~~~~~~~~L~~A~~~g-------~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~g--~~~~v~~Ll~----- 593 (821)
.+..++..+..|.||||+|+.++ +.++++.|+++|++++..|..|.||||+|+.+. ..+++++|++
T Consensus 164 ~~~~i~~~~~~g~t~L~~~i~~~s~~~~~~~~~v~k~Li~~g~~~~~~d~~g~t~l~~~~~~~~i~~ei~~~L~~~~~~~ 243 (631)
T PHA02792 164 YDYTTDYDDRMGKTVLYYYIITRSQDGYATSLDVINYLISHEKEMRYYTYREHTTLYYYVDKCDIKREIFDALFDSNYSG 243 (631)
T ss_pred cccccccCCCCCCchHHHHHhhCCcccccCCHHHHHHHHhCCCCcCccCCCCChHHHHHHHcccchHHHHHHHHhccccc
Confidence 34445666777889999999888 789999999999999888888999999988877 5555555543
Q ss_pred --------------------------------------------------------------------------------
Q 003425 594 -------------------------------------------------------------------------------- 593 (821)
Q Consensus 594 -------------------------------------------------------------------------------- 593 (821)
T Consensus 244 ~~~~~~l~~y~~~~~~~~~~~id~~iv~~ll~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~q~~l~~Yl~~~~v~iei 323 (631)
T PHA02792 244 NELMNILSNYLRKQYRNKNHKIDNYIVDKLLSGHDTFYILELCNSLRNNIIISSILKRYTDSIQDLLSEYVSYHTVYINV 323 (631)
T ss_pred cchHhHHHHHHHHHhccCccCccHHHHHHHHhCCCccchhhhhhhhhhhhHHHHHHHHHhHHHHHHHHHHHhcCCccHHH
Confidence
Q ss_pred ------cCCCCCCCCCCCCcHHHHHHHcCChHHHHHHHhcCCCCCccc----ccchhhHHHhcCCHH---HHHHHHHCCC
Q 003425 594 ------KGVDINLKDNFGNTPLLEAIKYGNDGAASLLVKEGASLNVEE----AGSFLCTAVARGDSD---LLKRVLSNGI 660 (821)
Q Consensus 594 ------~g~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~----~~t~l~~A~~~~~~~---~v~~Ll~~g~ 660 (821)
+|++.+ ...+..+++.|+..|+.+++++|+++|++++.++ +.||||.|+..+..+ +++.|+++|+
T Consensus 324 IK~LId~Ga~~~--r~~~~n~~~~Aa~~gn~eIVelLIs~GADIN~kD~~g~~~TpLh~A~~n~~~~v~~IlklLIs~GA 401 (631)
T PHA02792 324 IKCMIDEGATLY--RFKHINKYFQKFDNRDPKVVEYILKNGNVVVEDDDNIINIMPLFPTLSIHESDVLSILKLCKPYID 401 (631)
T ss_pred HHHHHHCCCccc--cCCcchHHHHHHHcCCHHHHHHHHHcCCchhhhcCCCCChhHHHHHHHhccHhHHHHHHHHHhcCC
Confidence 333222 1124567899999999999999999999998765 348999888776654 6888999999
Q ss_pred CCCCCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHH--c-C-------CHHHHHHHHhcccccc
Q 003425 661 DPNTRDYDLRTPLHVAASEGLYLMAKLLVEAGASVFPKDRWGNTPLDEGRM--C-G-------NKNLIKLLEDAKSTQL 729 (821)
Q Consensus 661 ~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~--~-~-------~~~i~~~Ll~~~a~~~ 729 (821)
++|.+|..|.||||+|+..++.+++++|+++|++++.+|..|.||+++|+. . + ..+++++|+++|++..
T Consensus 402 DIN~kD~~G~TPLh~Aa~~~n~eivelLLs~GADIN~kD~~G~TpL~~A~~~~~~~~~~i~~~~~~il~lLLs~~p~i~ 480 (631)
T PHA02792 402 DINKIDKHGRSILYYCIESHSVSLVEWLIDNGADINITTKYGSTCIGICVILAHACIPEIAELYIKILEIILSKLPTIE 480 (631)
T ss_pred ccccccccCcchHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHHHhcccHHHHHHHHHHHHHHHhcCCChh
Confidence 999999999999999999999999999999999999999999999999976 2 2 2567899999987753
No 52
>KOG1545 consensus Voltage-gated shaker-like K+ channel KCNA [Inorganic ion transport and metabolism]
Probab=99.90 E-value=1.8e-25 Score=217.10 Aligned_cols=179 Identities=18% Similarity=0.298 Sum_probs=128.3
Q ss_pred CeehhHHHHHHHHHHhHhheeeEEEEeCCceEEeeccHHHHHHHhhh-hhHHHHHhhhhHHHHHhhc-----------Cc
Q 003425 104 NLYVLDIVGQIAFLFDIVLQFCLAYRDSQTYRLICKRTPIALRYLRS-SFIIDLFSCMPWDLIYKAS-----------GR 171 (821)
Q Consensus 104 ~~~~~~~~~~~~f~~Di~l~f~t~y~~~~~~~~v~~~~~I~~~Ylk~-~f~iDlis~lP~~~~~~~~-----------~~ 171 (821)
.+++++.+|.+||.+++++|| +.+|.+ .-|.++ ..+||++|++|+.+.+... ..
T Consensus 254 PFFiVEt~CIiWFtfEllvRf------------~aCPsK--~~Ff~nimNiIDiVaI~PyFitlgtela~q~g~g~~gqq 319 (507)
T KOG1545|consen 254 PFFIVETLCIIWFTFELLVRF------------FACPSK--ATFFRNIMNIIDIVAIIPYFITLGTELAEQQGGGGQGQQ 319 (507)
T ss_pred chHhHHHHHHHHHhHHHHHHH------------hcCccH--HHHHHHHHHHHHHHHHHHHHHHHhHHHHHhhcCCccchh
Confidence 478999999999999999976 455666 678888 5599999999987654221 11
Q ss_pred h---hHHHHHHHHHHHHHHHHHHHHHhhhhhHhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCceeccc
Q 003425 172 K---EAVRYLLWIRLYRVRKVSQFFHKMEKDIRI-NYMFSRIVKLIAVELYCSHIAACIFYYLATTLPPEQEGYTWIGSL 247 (821)
Q Consensus 172 ~---~~~~~l~llrl~rl~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~h~~ac~~~~i~~~~~~~~~~~~w~~~~ 247 (821)
. ..+|++|+.|++|++|+.|..+.++-..+. ......+..+++++++..-+++...|+.+...+.
T Consensus 320 aMSlAILRViRLVRVFRIFKLSRHSkGLQILGqTl~aSmrElgLLIFFlfIgviLFsSavYFAEade~~----------- 388 (507)
T KOG1545|consen 320 AMSLAILRVIRLVRVFRIFKLSRHSKGLQILGQTLRASMRELGLLIFFLFIGVILFSSAVYFAEADEPE----------- 388 (507)
T ss_pred hhhHHHHHHHHHHHHhhheeeccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhceeeeeecCCCc-----------
Confidence 1 234444444444455555554445443332 3344456666666666666666666655443222
Q ss_pred cCCCCCcccccccchHHHHHHHHHHHHHHhhccccCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 003425 248 KMGDYSYADFREIGFWKSYITSMYASVVTMTTVGYGDVHAVNLREMVFIMIYVSFDMILGAYLIGNMTALIVK 320 (821)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~Y~~s~yw~~~t~tTvGyGdi~p~t~~e~~~~~~~~i~g~~~~a~~i~~i~~~~~~ 320 (821)
+-|.+.++||||+++|||||||||+.|.|..++++..+|.+.|++..|+++..|.+.+.-
T Consensus 389 -------------S~F~SIPdaFWwavVTMTTVGYGDm~P~TvgGKIVGslCAiaGVLTiALPVPVIVsNFny 448 (507)
T KOG1545|consen 389 -------------SHFSSIPDAFWWAVVTMTTVGYGDMVPVTVGGKIVGSLCAIAGVLTIALPVPVIVSNFNY 448 (507)
T ss_pred -------------cCCCcCcccceEEEEEEEeeccccceecccCceehhhHHhhhhheEecccccEEEecccc
Confidence 124578899999999999999999999999999999999999999999999988777655
No 53
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.90 E-value=3.7e-23 Score=244.71 Aligned_cols=219 Identities=20% Similarity=0.111 Sum_probs=174.2
Q ss_pred HHHHHhcCCcchhhhhhhcccccccccchhhhHhhhHH-HHhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcC--
Q 003425 507 VLTNLLQGKESDLRLKQLQSDITFHISKHEAELALKVN-SAAYHGDLYQLEGLIRAGADPNRTDYDGRSPLHLAASRG-- 583 (821)
Q Consensus 507 ~l~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~-~A~~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~g-- 583 (821)
.+..+..+++.......+++....+++..|..|.|||| .|+.+++.++++.|++.|+ .+..|.||||.|+.++
T Consensus 20 ~~l~A~~~g~~~~v~~lL~~~~~~~in~~d~~G~t~Lh~~A~~~~~~eiv~lLl~~g~----~~~~G~T~Lh~A~~~~~~ 95 (743)
T TIGR00870 20 AFLPAAERGDLASVYRDLEEPKKLNINCPDRLGRSALFVAAIENENLELTELLLNLSC----RGAVGDTLLHAISLEYVD 95 (743)
T ss_pred HHHHHHHcCCHHHHHHHhccccccCCCCcCccchhHHHHHHHhcChHHHHHHHHhCCC----CCCcChHHHHHHHhccHH
Confidence 33445555555555555655345667778899999999 8999999999999999987 6678999999998732
Q ss_pred -CHHHHHHHHHcCCC------CC----CCCCCCCcHHHHHHHcCChHHHHHHHhcCCCCCcc----------------cc
Q 003425 584 -YEEIMTFLIQKGVD------IN----LKDNFGNTPLLEAIKYGNDGAASLLVKEGASLNVE----------------EA 636 (821)
Q Consensus 584 -~~~~v~~Ll~~g~~------~~----~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~----------------~~ 636 (821)
...+++.+.+.+.+ ++ ..+..|.||||+|+.+|+.+++++|+++|++++.. .|
T Consensus 96 ~v~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~~~~~~~~~~~~~~~~g 175 (743)
T TIGR00870 96 AVEAILLHLLAAFRKSGPLELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVDSFYHG 175 (743)
T ss_pred HHHHHHHHHhhcccccCchhhhccccccccCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcCCchhhcCCCCCccccc
Confidence 23344444444422 11 12356999999999999999999999999999853 37
Q ss_pred cchhhHHHhcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcC---------cHHHHHHHHHcCCCC-------CCCCC
Q 003425 637 GSFLCTAVARGDSDLLKRVLSNGIDPNTRDYDLRTPLHVAASEG---------LYLMAKLLVEAGASV-------FPKDR 700 (821)
Q Consensus 637 ~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~T~Lh~A~~~g---------~~~~v~~Ll~~ga~~-------~~~d~ 700 (821)
.+|||.|+..|+.+++++|+++|+|+|.+|..|+||||+|+..+ ...+.+++++.+++. +..|.
T Consensus 176 ~tpL~~Aa~~~~~~iv~lLl~~gadin~~d~~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~el~~i~N~ 255 (743)
T TIGR00870 176 ESPLNAAACLGSPSIVALLSEDPADILTADSLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDKLRDSKELEVILNH 255 (743)
T ss_pred ccHHHHHHHhCCHHHHHHHhcCCcchhhHhhhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCChHhhhhhcCC
Confidence 79999999999999999999999999999999999999999987 234667777766554 67799
Q ss_pred CCCCHHHHHHHcCCHHHHHHHHhcccccc
Q 003425 701 WGNTPLDEGRMCGNKNLIKLLEDAKSTQL 729 (821)
Q Consensus 701 ~g~t~l~~A~~~~~~~i~~~Ll~~~a~~~ 729 (821)
+|.||||+|+..|+.+++++|++.+.+..
T Consensus 256 ~g~TPL~~A~~~g~~~l~~lLL~~~~~~k 284 (743)
T TIGR00870 256 QGLTPLKLAAKEGRIVLFRLKLAIKYKQK 284 (743)
T ss_pred CCCCchhhhhhcCCccHHHHHHHHHHhcc
Confidence 99999999999999999999999765543
No 54
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.89 E-value=2.5e-23 Score=203.27 Aligned_cols=159 Identities=28% Similarity=0.390 Sum_probs=145.8
Q ss_pred CCCCCCCCCcHHHHHHHcCCHHHHHHHHHcC-CCCCCCCCCCCcHHHHHHHc-----CChHHHHHHHhcCCCCCcc---c
Q 003425 565 PNRTDYDGRSPLHLAASRGYEEIMTFLIQKG-VDINLKDNFGNTPLLEAIKY-----GNDGAASLLVKEGASLNVE---E 635 (821)
Q Consensus 565 ~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~~~~~~~~g~tpL~~A~~~-----~~~~~v~~Ll~~~~~~~~~---~ 635 (821)
+|..|.+|+|+||||+.+++.++|+.||+.| ++++.+|.-|.||+++|+.. .+..+|.-|...| |+|.+ .
T Consensus 261 VNlaDsNGNTALHYsVSHaNF~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mg-nVNaKAsQ~ 339 (452)
T KOG0514|consen 261 VNLADSNGNTALHYAVSHANFDVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMG-DVNAKASQH 339 (452)
T ss_pred hhhhcCCCCeeeeeeecccchHHHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhcc-Ccchhhhhh
Confidence 6888999999999999999999999999986 78999999999999999864 3567788887765 56654 4
Q ss_pred ccchhhHHHhcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHcCC
Q 003425 636 AGSFLCTAVARGDSDLLKRVLSNGIDPNTRDYDLRTPLHVAASEGLYLMAKLLVEA-GASVFPKDRWGNTPLDEGRMCGN 714 (821)
Q Consensus 636 ~~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~-ga~~~~~d~~g~t~l~~A~~~~~ 714 (821)
|+|+|++|+.+|+.++|+.||..|+|+|.+|.+|.|+|+.||.+||.|++++||.. ++|....|.+|.|+|.+|...||
T Consensus 340 gQTALMLAVSHGr~d~vk~LLacgAdVNiQDdDGSTALMCA~EHGhkEivklLLA~p~cd~sLtD~DgSTAl~IAleagh 419 (452)
T KOG0514|consen 340 GQTALMLAVSHGRVDMVKALLACGADVNIQDDDGSTALMCAAEHGHKEIVKLLLAVPSCDISLTDVDGSTALSIALEAGH 419 (452)
T ss_pred cchhhhhhhhcCcHHHHHHHHHccCCCccccCCccHHHhhhhhhChHHHHHHHhccCcccceeecCCCchhhhhHHhcCc
Confidence 89999999999999999999999999999999999999999999999999999986 79999999999999999999999
Q ss_pred HHHHHHHHhc
Q 003425 715 KNLIKLLEDA 724 (821)
Q Consensus 715 ~~i~~~Ll~~ 724 (821)
.+|.-+|-.+
T Consensus 420 ~eIa~mlYa~ 429 (452)
T KOG0514|consen 420 REIAVMLYAH 429 (452)
T ss_pred hHHHHHHHHH
Confidence 9999888654
No 55
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.89 E-value=9.6e-23 Score=210.44 Aligned_cols=200 Identities=31% Similarity=0.361 Sum_probs=166.7
Q ss_pred hhHHHHhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCChHH
Q 003425 541 LKVNSAAYHGDLYQLEGLIRAGADPNRTDYDGRSPLHLAASRGYEEIMTFLIQKGVDINLKDNFGNTPLLEAIKYGNDGA 620 (821)
Q Consensus 541 ~~L~~A~~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~tpL~~A~~~~~~~~ 620 (821)
-.+..||..|+.+-++.|+..|+++|..+.+|.|+||-||...+.+||++|+++|+++|..|..|+||||.|+.+|+.++
T Consensus 42 a~~l~A~~~~d~~ev~~ll~~ga~~~~~n~DglTalhq~~id~~~e~v~~l~e~ga~Vn~~d~e~wtPlhaaascg~~~i 121 (527)
T KOG0505|consen 42 AVFLEACSRGDLEEVRKLLNRGASPNLCNVDGLTALHQACIDDNLEMVKFLVENGANVNAQDNEGWTPLHAAASCGYLNI 121 (527)
T ss_pred HHHHhccccccHHHHHHHhccCCCccccCCccchhHHHHHhcccHHHHHHHHHhcCCccccccccCCcchhhcccccHHH
Confidence 34667899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCccc--ccchhhH------------HHhcCC--H------------HHHHHHHHCCCCCCCCCCCCCcH
Q 003425 621 ASLLVKEGASLNVEE--AGSFLCT------------AVARGD--S------------DLLKRVLSNGIDPNTRDYDLRTP 672 (821)
Q Consensus 621 v~~Ll~~~~~~~~~~--~~t~l~~------------A~~~~~--~------------~~v~~Ll~~g~~~~~~d~~g~T~ 672 (821)
+++|+++|+++...+ |..|... +..... + +=+...+..|.+.+..+..|.|+
T Consensus 122 ~~~li~~gA~~~avNsdg~~P~dl~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l~~G~~~d~~~~rG~T~ 201 (527)
T KOG0505|consen 122 VEYLIQHGANLLAVNSDGNMPYDLAEDEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQWLNAGAELDARHARGATA 201 (527)
T ss_pred HHHHHHhhhhhhhccCCCCCccccccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHHHhccccccccccccchH
Confidence 999999998775543 2322111 111111 1 12333345788888888889999
Q ss_pred HHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccCCCCCCccc
Q 003425 673 LHVAASEGLYLMAKLLVEAGASVFPKDRWGNTPLDEGRMCGNKNLIKLLEDAKSTQLLEFPHGFQDTA 740 (821)
Q Consensus 673 Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~i~~~Ll~~~a~~~~~~~~~~~~~~ 740 (821)
||.|+..|..++.++|+++|.+++.+|.+||||||.|+.-|+.+++++|+++|++.......|.++..
T Consensus 202 lHvAaa~Gy~e~~~lLl~ag~~~~~~D~dgWtPlHAAA~Wg~~~~~elL~~~ga~~d~~t~~g~~p~d 269 (527)
T KOG0505|consen 202 LHVAAANGYTEVAALLLQAGYSVNIKDYDGWTPLHAAAHWGQEDACELLVEHGADMDAKTKMGETPLD 269 (527)
T ss_pred HHHHHhhhHHHHHHHHHHhccCcccccccCCCcccHHHHhhhHhHHHHHHHhhcccchhhhcCCCCcc
Confidence 99999999999999999999999999999999999999999999999999999998888877777655
No 56
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.89 E-value=2.6e-23 Score=188.91 Aligned_cols=201 Identities=20% Similarity=0.153 Sum_probs=184.1
Q ss_pred hhhHHHHhhcCCHHHHHHHHHcCCC-CCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCh
Q 003425 540 ALKVNSAAYHGDLYQLEGLIRAGAD-PNRTDYDGRSPLHLAASRGYEEIMTFLIQKGVDINLKDNFGNTPLLEAIKYGND 618 (821)
Q Consensus 540 ~~~L~~A~~~g~~~~v~~Ll~~g~~-~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~tpL~~A~~~~~~ 618 (821)
..-+-.|...|+.+.+.......++ +..+|.+|++++|.|+-+++...+..++.+|+..|..+--+++|+.+++...+.
T Consensus 63 e~~~~~~~~s~nsd~~v~s~~~~~~~~~~t~p~g~~~~~v~ap~~s~~k~sttltN~~rgnevs~~p~s~~slsVhql~L 142 (296)
T KOG0502|consen 63 ESLLTVAVRSGNSDVAVQSAQLDPDAIDETDPEGWSALLVAAPCGSVDKVSTTLTNGARGNEVSLMPWSPLSLSVHQLHL 142 (296)
T ss_pred CcccchhhhcCCcHHHHHhhccCCCCCCCCCchhhhhhhhcCCCCCcceeeeeecccccCCccccccCChhhHHHHHHHH
Confidence 3344567788888888888776655 556788899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCCcccccchhhHHHhcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCC
Q 003425 619 GAASLLVKEGASLNVEEAGSFLCTAVARGDSDLLKRVLSNGIDPNTRDYDLRTPLHVAASEGLYLMAKLLVEAGASVFPK 698 (821)
Q Consensus 619 ~~v~~Ll~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~ga~~~~~ 698 (821)
+.+..+.++-.+--.+.|.|||.+|+..|+..+|++|++.|+|++...+...|+|.+|++.|..++|++|+.++.|+|.-
T Consensus 143 ~~~~~~~~n~VN~~De~GfTpLiWAaa~G~i~vV~fLL~~GAdp~~lgk~resALsLAt~ggytdiV~lLL~r~vdVNvy 222 (296)
T KOG0502|consen 143 DVVDLLVNNKVNACDEFGFTPLIWAAAKGHIPVVQFLLNSGADPDALGKYRESALSLATRGGYTDIVELLLTREVDVNVY 222 (296)
T ss_pred HHHHHHhhccccCccccCchHhHHHHhcCchHHHHHHHHcCCChhhhhhhhhhhHhHHhcCChHHHHHHHHhcCCCccee
Confidence 99998888877777778999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHcCCHHHHHHHHhccccccccCCCCCCccc
Q 003425 699 DRWGNTPLDEGRMCGNKNLIKLLEDAKSTQLLEFPHGFQDTA 740 (821)
Q Consensus 699 d~~g~t~l~~A~~~~~~~i~~~Ll~~~a~~~~~~~~~~~~~~ 740 (821)
|-+|-|||-+|++.||.+|++.|++.||++......|.....
T Consensus 223 DwNGgTpLlyAvrgnhvkcve~Ll~sGAd~t~e~dsGy~~md 264 (296)
T KOG0502|consen 223 DWNGGTPLLYAVRGNHVKCVESLLNSGADVTQEDDSGYWIMD 264 (296)
T ss_pred ccCCCceeeeeecCChHHHHHHHHhcCCCcccccccCCcHHH
Confidence 999999999999999999999999999999999988876544
No 57
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.88 E-value=5.4e-23 Score=219.17 Aligned_cols=210 Identities=23% Similarity=0.248 Sum_probs=180.0
Q ss_pred ccccchhhhHhhhHHHHhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHH
Q 003425 530 FHISKHEAELALKVNSAAYHGDLYQLEGLIRAGADPNRTDYDGRSPLHLAASRGYEEIMTFLIQKGVDINLKDNFGNTPL 609 (821)
Q Consensus 530 ~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~tpL 609 (821)
...+..|..|-|+||.||.+|+.++++.|++..+-++..|..|.+|||+|+.+|+.++++.|+.++..+|..+..|.|||
T Consensus 40 ds~n~qd~~gfTalhha~Lng~~~is~llle~ea~ldl~d~kg~~plhlaaw~g~~e~vkmll~q~d~~na~~~e~~tpl 119 (854)
T KOG0507|consen 40 DSHNLQDYSGFTLLHHAVLNGQNQISKLLLDYEALLDLCDTKGILPLHLAAWNGNLEIVKMLLLQTDILNAVNIENETPL 119 (854)
T ss_pred ccccccCccchhHHHHHHhcCchHHHHHHhcchhhhhhhhccCcceEEehhhcCcchHHHHHHhcccCCCcccccCcCcc
Confidence 34566777899999999999999999999998888888888899999999999999999999999988999999999999
Q ss_pred HHHHHcCChHHHHHHHhcCCCCCccc--ccchhhHHHhcCCHHHHHHHHHCCCCC--------CCCCCCCCcHHHHHHHc
Q 003425 610 LEAIKYGNDGAASLLVKEGASLNVEE--AGSFLCTAVARGDSDLLKRVLSNGIDP--------NTRDYDLRTPLHVAASE 679 (821)
Q Consensus 610 ~~A~~~~~~~~v~~Ll~~~~~~~~~~--~~t~l~~A~~~~~~~~v~~Ll~~g~~~--------~~~d~~g~T~Lh~A~~~ 679 (821)
|.|+++||.+++.+|+++|+++-..+ +.|++-.|++-|..++++.|++...++ ..++..+.+|||.|+++
T Consensus 120 hlaaqhgh~dvv~~Ll~~~adp~i~nns~~t~ldlA~qfgr~~Vvq~ll~~~~~~~~~~~~~~~~~~~~~~~plHlaakn 199 (854)
T KOG0507|consen 120 HLAAQHGHLEVVFYLLKKNADPFIRNNSKETVLDLASRFGRAEVVQMLLQKKFPVQSSLRVGDIKRPFPAIYPLHLAAKN 199 (854)
T ss_pred chhhhhcchHHHHHHHhcCCCccccCcccccHHHHHHHhhhhHHHHHHhhhccchhhcccCCCCCCCCCCcCCcchhhhc
Confidence 99999999999999999998877654 678999999999999999998753221 23445678899999999
Q ss_pred CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccCCCCCCccc
Q 003425 680 GLYLMAKLLVEAGASVFPKDRWGNTPLDEGRMCGNKNLIKLLEDAKSTQLLEFPHGFQDTA 740 (821)
Q Consensus 680 g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~i~~~Ll~~~a~~~~~~~~~~~~~~ 740 (821)
|+.++++.|+++|.|+|.....| |+||.|+.+|..+++.+|++.|.+...++.+|.+..+
T Consensus 200 gh~~~~~~ll~ag~din~~t~~g-talheaalcgk~evvr~ll~~gin~h~~n~~~qtald 259 (854)
T KOG0507|consen 200 GHVECMQALLEAGFDINYTTEDG-TALHEAALCGKAEVVRFLLEIGINTHIKNQHGQTALD 259 (854)
T ss_pred chHHHHHHHHhcCCCcccccccc-hhhhhHhhcCcchhhhHHHhhccccccccccchHHHH
Confidence 99999999999999999887765 8999999999999999999999998888888766654
No 58
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.88 E-value=3.2e-22 Score=236.83 Aligned_cols=200 Identities=22% Similarity=0.185 Sum_probs=167.1
Q ss_pred hhHhhhHHHHhhcCCHHHHHHHHHc--CCCCCCCCCCCCcHHH-HHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHH
Q 003425 537 AELALKVNSAAYHGDLYQLEGLIRA--GADPNRTDYDGRSPLH-LAASRGYEEIMTFLIQKGVDINLKDNFGNTPLLEAI 613 (821)
Q Consensus 537 ~~~~~~L~~A~~~g~~~~v~~Ll~~--g~~~n~~d~~g~t~L~-~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~tpL~~A~ 613 (821)
.++..+++.||..|+.+.++.+++. +.++|..|..|+|||| .|+.+++.+++++|+++|+ .+..|.||||.|+
T Consensus 15 ~~~~~~~l~A~~~g~~~~v~~lL~~~~~~~in~~d~~G~t~Lh~~A~~~~~~eiv~lLl~~g~----~~~~G~T~Lh~A~ 90 (743)
T TIGR00870 15 SDEEKAFLPAAERGDLASVYRDLEEPKKLNINCPDRLGRSALFVAAIENENLELTELLLNLSC----RGAVGDTLLHAIS 90 (743)
T ss_pred CHHHHHHHHHHHcCCHHHHHHHhccccccCCCCcCccchhHHHHHHHhcChHHHHHHHHhCCC----CCCcChHHHHHHH
Confidence 4678999999999999999999998 8999999999999999 8889999999999999987 6778999999998
Q ss_pred HcC---ChHHHHHHHhcCCC------CC------cccccchhhHHHhcCCHHHHHHHHHCCCCCCCCC------------
Q 003425 614 KYG---NDGAASLLVKEGAS------LN------VEEAGSFLCTAVARGDSDLLKRVLSNGIDPNTRD------------ 666 (821)
Q Consensus 614 ~~~---~~~~v~~Ll~~~~~------~~------~~~~~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~d------------ 666 (821)
..+ ...++..+...+.+ .+ ...|.||||.||.+|+.+++++|+++|++++.++
T Consensus 91 ~~~~~~v~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~~~~~~~~~~~~ 170 (743)
T TIGR00870 91 LEYVDAVEAILLHLLAAFRKSGPLELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVD 170 (743)
T ss_pred hccHHHHHHHHHHHhhcccccCchhhhccccccccCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcCCchhhcCCCCC
Confidence 732 22334444444422 11 1348899999999999999999999999998653
Q ss_pred --CCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC---------CHHHHHHHHhccccc-------
Q 003425 667 --YDLRTPLHVAASEGLYLMAKLLVEAGASVFPKDRWGNTPLDEGRMCG---------NKNLIKLLEDAKSTQ------- 728 (821)
Q Consensus 667 --~~g~T~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~---------~~~i~~~Ll~~~a~~------- 728 (821)
..|.||||.|+..|+.+++++|+++|+|++.+|..|+||||+|+..+ ...+.+++++.++..
T Consensus 171 ~~~~g~tpL~~Aa~~~~~~iv~lLl~~gadin~~d~~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~el~ 250 (743)
T TIGR00870 171 SFYHGESPLNAAACLGSPSIVALLSEDPADILTADSLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDKLRDSKELE 250 (743)
T ss_pred cccccccHHHHHHHhCCHHHHHHHhcCCcchhhHhhhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCChHhhh
Confidence 25899999999999999999999999999999999999999999987 334667777766654
Q ss_pred cccCCCCCCccc
Q 003425 729 LLEFPHGFQDTA 740 (821)
Q Consensus 729 ~~~~~~~~~~~~ 740 (821)
...+..|.+|.+
T Consensus 251 ~i~N~~g~TPL~ 262 (743)
T TIGR00870 251 VILNHQGLTPLK 262 (743)
T ss_pred hhcCCCCCCchh
Confidence 556777777655
No 59
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.87 E-value=3.6e-22 Score=206.27 Aligned_cols=205 Identities=30% Similarity=0.362 Sum_probs=167.7
Q ss_pred CcchhhhhhhcccccccccchhhhHhhhHHHHhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHc
Q 003425 515 KESDLRLKQLQSDITFHISKHEAELALKVNSAAYHGDLYQLEGLIRAGADPNRTDYDGRSPLHLAASRGYEEIMTFLIQK 594 (821)
Q Consensus 515 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ 594 (821)
.+...+...+..+. ..+..+.+|.|+||.||...+.++|++|++.|+++|..|..||||||.|+..|+..++++|+++
T Consensus 51 ~d~~ev~~ll~~ga--~~~~~n~DglTalhq~~id~~~e~v~~l~e~ga~Vn~~d~e~wtPlhaaascg~~~i~~~li~~ 128 (527)
T KOG0505|consen 51 GDLEEVRKLLNRGA--SPNLCNVDGLTALHQACIDDNLEMVKFLVENGANVNAQDNEGWTPLHAAASCGYLNIVEYLIQH 128 (527)
T ss_pred ccHHHHHHHhccCC--CccccCCccchhHHHHHhcccHHHHHHHHHhcCCccccccccCCcchhhcccccHHHHHHHHHh
Confidence 33333444444432 3367788999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCcHHHHHHHcCChH--------------------------HHHHHHhcCCCCCcc--cccchhhHHHhc
Q 003425 595 GVDINLKDNFGNTPLLEAIKYGNDG--------------------------AASLLVKEGASLNVE--EAGSFLCTAVAR 646 (821)
Q Consensus 595 g~~~~~~~~~g~tpL~~A~~~~~~~--------------------------~v~~Ll~~~~~~~~~--~~~t~l~~A~~~ 646 (821)
|+++...|.+|..|+..|......+ =++..+..|...+.. .|.|+||.|+.+
T Consensus 129 gA~~~avNsdg~~P~dl~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l~~G~~~d~~~~rG~T~lHvAaa~ 208 (527)
T KOG0505|consen 129 GANLLAVNSDGNMPYDLAEDEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQWLNAGAELDARHARGATALHVAAAN 208 (527)
T ss_pred hhhhhhccCCCCCccccccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHHHhccccccccccccchHHHHHHhh
Confidence 9998888888887765442211111 123334456555443 388999999999
Q ss_pred CCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH
Q 003425 647 GDSDLLKRVLSNGIDPNTRDYDLRTPLHVAASEGLYLMAKLLVEAGASVFPKDRWGNTPLDEGRMCGNKNLIKLLE 722 (821)
Q Consensus 647 ~~~~~v~~Ll~~g~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~i~~~Ll 722 (821)
|..++.++|+++|.+++.+|.+|+||||.|+..|..+++++|+++|++.+..+..|.||+++|...-- ...++..
T Consensus 209 Gy~e~~~lLl~ag~~~~~~D~dgWtPlHAAA~Wg~~~~~elL~~~ga~~d~~t~~g~~p~dv~dee~~-~l~eLe~ 283 (527)
T KOG0505|consen 209 GYTEVAALLLQAGYSVNIKDYDGWTPLHAAAHWGQEDACELLVEHGADMDAKTKMGETPLDVADEEEL-YLLELEL 283 (527)
T ss_pred hHHHHHHHHHHhccCcccccccCCCcccHHHHhhhHhHHHHHHHhhcccchhhhcCCCCccchhhhhH-HHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999886333 4344443
No 60
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.87 E-value=1.7e-21 Score=184.54 Aligned_cols=148 Identities=18% Similarity=0.187 Sum_probs=96.0
Q ss_pred cCCCCCCCCCCCCcHHHHHHHcCCH----HHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCChHHHHHHHhcCCCCCcccc
Q 003425 561 AGADPNRTDYDGRSPLHLAASRGYE----EIMTFLIQKGVDINLKDNFGNTPLLEAIKYGNDGAASLLVKEGASLNVEEA 636 (821)
Q Consensus 561 ~g~~~n~~d~~g~t~L~~A~~~g~~----~~v~~Ll~~g~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~ 636 (821)
+|+|++..+.++.++||.||+.|+. +++++|++.|++++.+|..|+||||+|+..|+.+.+
T Consensus 9 ~~~~~~~~~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~~~~d~~g~t~Lh~Aa~~g~~~~~--------------- 73 (166)
T PHA02743 9 NNLGAVEIDEDEQNTFLRICRTGNIYELMEVAPFISGDGHLLHRYDHHGRQCTHMVAWYDRANAV--------------- 73 (166)
T ss_pred cchHHhhhccCCCcHHHHHHHcCCHHHHHHHHHHHhhcchhhhccCCCCCcHHHHHHHhCccCHH---------------
Confidence 4566777777788888888888887 556667777888888888888888888887765542
Q ss_pred cchhhHHHhcCCHHHHHHHHHCCCCCCCCC-CCCCcHHHHHHHcCcHHHHHHHHH-cCCCCCCCCCCCCCHHHHHHHcCC
Q 003425 637 GSFLCTAVARGDSDLLKRVLSNGIDPNTRD-YDLRTPLHVAASEGLYLMAKLLVE-AGASVFPKDRWGNTPLDEGRMCGN 714 (821)
Q Consensus 637 ~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~d-~~g~T~Lh~A~~~g~~~~v~~Ll~-~ga~~~~~d~~g~t~l~~A~~~~~ 714 (821)
+++++|+++|+++|.+| ..|.||||+|+..|+.+++++|++ .|++++.+|..|.||||+|+..++
T Consensus 74 -------------~~i~~Ll~~Gadin~~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~tpL~~A~~~~~ 140 (166)
T PHA02743 74 -------------MKIELLVNMGADINARELGTGNTLLHIAASTKNYELAEWLCRQLGVNLGAINYQHETAYHIAYKMRD 140 (166)
T ss_pred -------------HHHHHHHHcCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhccCCCccCcCCCCCCHHHHHHHcCC
Confidence 12344444555555555 356666666666666666666663 566666666666666666666666
Q ss_pred HHHHHHHHhccccccccCCCCC
Q 003425 715 KNLIKLLEDAKSTQLLEFPHGF 736 (821)
Q Consensus 715 ~~i~~~Ll~~~a~~~~~~~~~~ 736 (821)
.+++++|+++|++...++..|.
T Consensus 141 ~~iv~~Ll~~ga~~~~~~~~~~ 162 (166)
T PHA02743 141 RRMMEILRANGAVCDDPLSIGL 162 (166)
T ss_pred HHHHHHHHHcCCCCCCcccCCc
Confidence 6666666666666555554443
No 61
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.86 E-value=1.2e-21 Score=209.04 Aligned_cols=217 Identities=23% Similarity=0.282 Sum_probs=185.3
Q ss_pred chHHHHHHHhcCCcchhhhhhhcccccccccchhhhHhhhHHHHhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHc
Q 003425 503 DGRKVLTNLLQGKESDLRLKQLQSDITFHISKHEAELALKVNSAAYHGDLYQLEGLIRAGADPNRTDYDGRSPLHLAASR 582 (821)
Q Consensus 503 ~~~~~l~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~ 582 (821)
+.-..++.+..+....+....++.+..+.+.+ ..|.+|||+|++.|+.++++.++.++..+|..+..|.||||.||+.
T Consensus 48 ~gfTalhha~Lng~~~is~llle~ea~ldl~d--~kg~~plhlaaw~g~~e~vkmll~q~d~~na~~~e~~tplhlaaqh 125 (854)
T KOG0507|consen 48 SGFTLLHHAVLNGQNQISKLLLDYEALLDLCD--TKGILPLHLAAWNGNLEIVKMLLLQTDILNAVNIENETPLHLAAQH 125 (854)
T ss_pred cchhHHHHHHhcCchHHHHHHhcchhhhhhhh--ccCcceEEehhhcCcchHHHHHHhcccCCCcccccCcCccchhhhh
Confidence 34455666666665555556666666666654 8899999999999999999999999988999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCChHHHHHHHhcCCCC----------CcccccchhhHHHhcCCHHHH
Q 003425 583 GYEEIMTFLIQKGVDINLKDNFGNTPLLEAIKYGNDGAASLLVKEGASL----------NVEEAGSFLCTAVARGDSDLL 652 (821)
Q Consensus 583 g~~~~v~~Ll~~g~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~----------~~~~~~t~l~~A~~~~~~~~v 652 (821)
|+.+++.+|+++|+|+-.+|+.+.|+|..|++.|..++++.|++..... ..-.+.+|+|.|+++|+.+++
T Consensus 126 gh~dvv~~Ll~~~adp~i~nns~~t~ldlA~qfgr~~Vvq~ll~~~~~~~~~~~~~~~~~~~~~~~plHlaakngh~~~~ 205 (854)
T KOG0507|consen 126 GHLEVVFYLLKKNADPFIRNNSKETVLDLASRFGRAEVVQMLLQKKFPVQSSLRVGDIKRPFPAIYPLHLAAKNGHVECM 205 (854)
T ss_pred cchHHHHHHHhcCCCccccCcccccHHHHHHHhhhhHHHHHHhhhccchhhcccCCCCCCCCCCcCCcchhhhcchHHHH
Confidence 9999999999999999999999999999999999999999999873221 112356789999999999999
Q ss_pred HHHHHCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC---CHHHHHHHH
Q 003425 653 KRVLSNGIDPNTRDYDLRTPLHVAASEGLYLMAKLLVEAGASVFPKDRWGNTPLDEGRMCG---NKNLIKLLE 722 (821)
Q Consensus 653 ~~Ll~~g~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~---~~~i~~~Ll 722 (821)
+.|++.|.++|....+| |+||.|+..|..++|++|++.|.+...+|.+|+|+|++-...- ..+++-.+.
T Consensus 206 ~~ll~ag~din~~t~~g-talheaalcgk~evvr~ll~~gin~h~~n~~~qtaldil~d~~~~~~~ei~ga~~ 277 (854)
T KOG0507|consen 206 QALLEAGFDINYTTEDG-TALHEAALCGKAEVVRFLLEIGINTHIKNQHGQTALDIIIDLQENRRYEIAGAVK 277 (854)
T ss_pred HHHHhcCCCcccccccc-hhhhhHhhcCcchhhhHHHhhccccccccccchHHHHHHHhcchhhhhhhhhhhh
Confidence 99999999999887766 9999999999999999999999999999999999999876543 334444443
No 62
>PHA02741 hypothetical protein; Provisional
Probab=99.85 E-value=1.2e-20 Score=179.87 Aligned_cols=137 Identities=18% Similarity=0.240 Sum_probs=117.2
Q ss_pred CCCCCCCCCcHHHHHHHcCCHHHHHHHHH------cCCCCCCCCCCCCcHHHHHHHcCChHHHHHHHhcCCCCCcccccc
Q 003425 565 PNRTDYDGRSPLHLAASRGYEEIMTFLIQ------KGVDINLKDNFGNTPLLEAIKYGNDGAASLLVKEGASLNVEEAGS 638 (821)
Q Consensus 565 ~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~------~g~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~t 638 (821)
++.+|..|.||||+|+..|+.++++.|+. .|++++.+|..|.||||+|+..|+.+++
T Consensus 14 ~~~~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~----------------- 76 (169)
T PHA02741 14 IAEKNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLA----------------- 76 (169)
T ss_pred hhccccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHH-----------------
Confidence 34567889999999999999999998854 3678888999999999999988775433
Q ss_pred hhhHHHhcCCHHHHHHHHHCCCCCCCCCC-CCCcHHHHHHHcCcHHHHHHHHH-cCCCCCCCCCCCCCHHHHHHHcCCHH
Q 003425 639 FLCTAVARGDSDLLKRVLSNGIDPNTRDY-DLRTPLHVAASEGLYLMAKLLVE-AGASVFPKDRWGNTPLDEGRMCGNKN 716 (821)
Q Consensus 639 ~l~~A~~~~~~~~v~~Ll~~g~~~~~~d~-~g~T~Lh~A~~~g~~~~v~~Ll~-~ga~~~~~d~~g~t~l~~A~~~~~~~ 716 (821)
.+++++|+++|+++|.++. .|+||||+|+..++.+++++|++ .|++++..|..|+||||+|+..++.+
T Consensus 77 ----------~~ii~~Ll~~gadin~~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n~~g~tpL~~A~~~~~~~ 146 (169)
T PHA02741 77 ----------AEIIDHLIELGADINAQEMLEGDTALHLAAHRRDHDLAEWLCCQPGIDLHFCNADNKSPFELAIDNEDVA 146 (169)
T ss_pred ----------HHHHHHHHHcCCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCCHHHHHHHCCCHH
Confidence 2556777778888888885 89999999999999999999997 59999999999999999999999999
Q ss_pred HHHHHHhccccc
Q 003425 717 LIKLLEDAKSTQ 728 (821)
Q Consensus 717 i~~~Ll~~~a~~ 728 (821)
++++|++.++..
T Consensus 147 iv~~L~~~~~~~ 158 (169)
T PHA02741 147 MMQILREIVATS 158 (169)
T ss_pred HHHHHHHHHHHh
Confidence 999999988764
No 63
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.85 E-value=2.1e-21 Score=189.90 Aligned_cols=162 Identities=23% Similarity=0.350 Sum_probs=147.6
Q ss_pred cccccchhhhHhhhHHHHhhcCCHHHHHHHHHcC-CCCCCCCCCCCcHHHHHHHc-----CCHHHHHHHHHcCCCCCCCC
Q 003425 529 TFHISKHEAELALKVNSAAYHGDLYQLEGLIRAG-ADPNRTDYDGRSPLHLAASR-----GYEEIMTFLIQKGVDINLKD 602 (821)
Q Consensus 529 ~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~g-~~~n~~d~~g~t~L~~A~~~-----g~~~~v~~Ll~~g~~~~~~~ 602 (821)
...+|-.|.+|+|+||+|+.+++.++|+.||+.| +|+|.++.-|.||+++|+.. .+.++|..|...| |+|.+-
T Consensus 258 ~yvVNlaDsNGNTALHYsVSHaNF~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mg-nVNaKA 336 (452)
T KOG0514|consen 258 EYVVNLADSNGNTALHYAVSHANFDVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMG-DVNAKA 336 (452)
T ss_pred HHHhhhhcCCCCeeeeeeecccchHHHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhcc-Ccchhh
Confidence 4457788999999999999999999999999997 68999999999999999864 4678999998886 788775
Q ss_pred -CCCCcHHHHHHHcCChHHHHHHHhcCCCCCcc--cccchhhHHHhcCCHHHHHHHHHC-CCCCCCCCCCCCcHHHHHHH
Q 003425 603 -NFGNTPLLEAIKYGNDGAASLLVKEGASLNVE--EAGSFLCTAVARGDSDLLKRVLSN-GIDPNTRDYDLRTPLHVAAS 678 (821)
Q Consensus 603 -~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~--~~~t~l~~A~~~~~~~~v~~Ll~~-g~~~~~~d~~g~T~Lh~A~~ 678 (821)
..|+|+|++|+.+|+.++|+.||..|+|+|.. +|.|+|++||.+|+.+++++||.. ++|+...|.+|.|+|.+|..
T Consensus 337 sQ~gQTALMLAVSHGr~d~vk~LLacgAdVNiQDdDGSTALMCA~EHGhkEivklLLA~p~cd~sLtD~DgSTAl~IAle 416 (452)
T KOG0514|consen 337 SQHGQTALMLAVSHGRVDMVKALLACGADVNIQDDDGSTALMCAAEHGHKEIVKLLLAVPSCDISLTDVDGSTALSIALE 416 (452)
T ss_pred hhhcchhhhhhhhcCcHHHHHHHHHccCCCccccCCccHHHhhhhhhChHHHHHHHhccCcccceeecCCCchhhhhHHh
Confidence 57999999999999999999999999999976 589999999999999999999986 78999999999999999999
Q ss_pred cCcHHHHHHHHHc
Q 003425 679 EGLYLMAKLLVEA 691 (821)
Q Consensus 679 ~g~~~~v~~Ll~~ 691 (821)
.|+.++.-+|..+
T Consensus 417 agh~eIa~mlYa~ 429 (452)
T KOG0514|consen 417 AGHREIAVMLYAH 429 (452)
T ss_pred cCchHHHHHHHHH
Confidence 9999999888765
No 64
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.85 E-value=1.1e-20 Score=179.05 Aligned_cols=123 Identities=17% Similarity=0.012 Sum_probs=99.3
Q ss_pred cCCCCCCCCCCCCcHHHHHHHcCChHHHHHHHhcCCCCCcccccchhhHHHhcCCHHHHHHHHHCCCCCCCCCCCCCcHH
Q 003425 594 KGVDINLKDNFGNTPLLEAIKYGNDGAASLLVKEGASLNVEEAGSFLCTAVARGDSDLLKRVLSNGIDPNTRDYDLRTPL 673 (821)
Q Consensus 594 ~g~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~T~L 673 (821)
+|++++..+..+.+++|.||+.|+.+.+. +++++|.+.|++++.+|..|+|||
T Consensus 9 ~~~~~~~~~~~~~~~l~~a~~~g~~~~l~---------------------------~~~~~l~~~g~~~~~~d~~g~t~L 61 (166)
T PHA02743 9 NNLGAVEIDEDEQNTFLRICRTGNIYELM---------------------------EVAPFISGDGHLLHRYDHHGRQCT 61 (166)
T ss_pred cchHHhhhccCCCcHHHHHHHcCCHHHHH---------------------------HHHHHHhhcchhhhccCCCCCcHH
Confidence 34555556666666666666665553332 345567778888899999999999
Q ss_pred HHHHHcCcHH---HHHHHHHcCCCCCCCC-CCCCCHHHHHHHcCCHHHHHHHHh-ccccccccCCCCCCcccccc
Q 003425 674 HVAASEGLYL---MAKLLVEAGASVFPKD-RWGNTPLDEGRMCGNKNLIKLLED-AKSTQLLEFPHGFQDTADKR 743 (821)
Q Consensus 674 h~A~~~g~~~---~v~~Ll~~ga~~~~~d-~~g~t~l~~A~~~~~~~i~~~Ll~-~~a~~~~~~~~~~~~~~~~~ 743 (821)
|+|+..|+.+ ++++|+++|+++|.+| ..|+||||+|+..|+.+++++|++ .|++....+..|.++.+...
T Consensus 62 h~Aa~~g~~~~~~~i~~Ll~~Gadin~~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~tpL~~A~ 136 (166)
T PHA02743 62 HMVAWYDRANAVMKIELLVNMGADINARELGTGNTLLHIAASTKNYELAEWLCRQLGVNLGAINYQHETAYHIAY 136 (166)
T ss_pred HHHHHhCccCHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhccCCCccCcCCCCCCHHHHHH
Confidence 9999998765 4899999999999998 589999999999999999999995 89999999999999977543
No 65
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.83 E-value=6.2e-20 Score=186.79 Aligned_cols=153 Identities=24% Similarity=0.241 Sum_probs=115.3
Q ss_pred CCCCCCCc-HHHHHHHcCCHHHHHHHHHcCCCCCCCC----CCCCcHHHHHHHcCChHHHHHHHhcCCCCCcc---cccc
Q 003425 567 RTDYDGRS-PLHLAASRGYEEIMTFLIQKGVDINLKD----NFGNTPLLEAIKYGNDGAASLLVKEGASLNVE---EAGS 638 (821)
Q Consensus 567 ~~d~~g~t-~L~~A~~~g~~~~v~~Ll~~g~~~~~~~----~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~---~~~t 638 (821)
.+|..|.| +||.|+..|+.+++++|+++|+++|.++ ..|.||||+|+..++.+++++|+++|++++.. .|.|
T Consensus 27 ~~d~~~~~~lL~~A~~~~~~eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~g~T 106 (300)
T PHA02884 27 KKNKICIANILYSSIKFHYTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAKIT 106 (300)
T ss_pred ccCcCCCCHHHHHHHHcCCHHHHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCCCCC
Confidence 44555554 3455556677777777777777777653 46777777777777777777777777777753 3667
Q ss_pred hhhHHHhcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHH
Q 003425 639 FLCTAVARGDSDLLKRVLSNGIDPNTRDYDLRTPLHVAASEGLYLMAKLLVEAGASVFPKDRWGNTPLDEGRMCGNKNLI 718 (821)
Q Consensus 639 ~l~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~i~ 718 (821)
|||.|+..|+.+++++|+++|++++.+|..|.||||+|+..++.+++..+. |.. .+..+.+|.+++ ++.+++
T Consensus 107 pLh~Aa~~~~~eivklLL~~GAdin~kd~~G~TpL~~A~~~~~~~~~~~~~--~~~---~~~~~~~~~~~~---~n~ei~ 178 (300)
T PHA02884 107 PLYISVLHGCLKCLEILLSYGADINIQTNDMVTPIELALMICNNFLAFMIC--DNE---ISNFYKHPKKIL---INFDIL 178 (300)
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCChhHHHHhc--CCc---ccccccChhhhh---ccHHHH
Confidence 777777788888888888888999999999999999999999988876664 332 456678888875 478999
Q ss_pred HHHHhcccc
Q 003425 719 KLLEDAKST 727 (821)
Q Consensus 719 ~~Ll~~~a~ 727 (821)
++|+.++.-
T Consensus 179 ~~Lish~vl 187 (300)
T PHA02884 179 KILVSHFIL 187 (300)
T ss_pred HHHHHHHHH
Confidence 999999873
No 66
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.82 E-value=1.5e-19 Score=183.95 Aligned_cols=147 Identities=19% Similarity=0.197 Sum_probs=129.5
Q ss_pred HhhhHHHHhhcCCHHHHHHHHHcCCCCCCCC----CCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCC-CCCCCcHHHHHH
Q 003425 539 LALKVNSAAYHGDLYQLEGLIRAGADPNRTD----YDGRSPLHLAASRGYEEIMTFLIQKGVDINLK-DNFGNTPLLEAI 613 (821)
Q Consensus 539 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~n~~d----~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~-~~~g~tpL~~A~ 613 (821)
..++||.|+..|+.++++.|+++|+|+|.++ ..|.||||+|+..|+.+++++|+++|+|+|.+ +..|.||||.|+
T Consensus 33 ~~~lL~~A~~~~~~eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~g~TpLh~Aa 112 (300)
T PHA02884 33 IANILYSSIKFHYTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAKITPLYISV 112 (300)
T ss_pred CCHHHHHHHHcCCHHHHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCCCCCHHHHHH
Confidence 3467888888999999999999999999874 58999999999999999999999999999986 467999999999
Q ss_pred HcCChHHHHHHHhcCCCCCcc--cccchhhHHHhcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHc
Q 003425 614 KYGNDGAASLLVKEGASLNVE--EAGSFLCTAVARGDSDLLKRVLSNGIDPNTRDYDLRTPLHVAASEGLYLMAKLLVEA 691 (821)
Q Consensus 614 ~~~~~~~v~~Ll~~~~~~~~~--~~~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~ 691 (821)
..|+.+++++|+++|++++.. +|.||+|.|+..++.+++..+. |.. .+..+.+|++++ ++.+++++|+++
T Consensus 113 ~~~~~eivklLL~~GAdin~kd~~G~TpL~~A~~~~~~~~~~~~~--~~~---~~~~~~~~~~~~---~n~ei~~~Lish 184 (300)
T PHA02884 113 LHGCLKCLEILLSYGADINIQTNDMVTPIELALMICNNFLAFMIC--DNE---ISNFYKHPKKIL---INFDILKILVSH 184 (300)
T ss_pred HcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCChhHHHHhc--CCc---ccccccChhhhh---ccHHHHHHHHHH
Confidence 999999999999999999875 4889999999999998876664 322 456678899875 478999999999
Q ss_pred CC
Q 003425 692 GA 693 (821)
Q Consensus 692 ga 693 (821)
++
T Consensus 185 ~v 186 (300)
T PHA02884 185 FI 186 (300)
T ss_pred HH
Confidence 87
No 67
>PHA02741 hypothetical protein; Provisional
Probab=99.82 E-value=1.3e-19 Score=172.73 Aligned_cols=134 Identities=28% Similarity=0.297 Sum_probs=114.6
Q ss_pred ccchhhhHhhhHHHHhhcCCHHHHHHHHH------cCCCCCCCCCCCCcHHHHHHHcCC----HHHHHHHHHcCCCCCCC
Q 003425 532 ISKHEAELALKVNSAAYHGDLYQLEGLIR------AGADPNRTDYDGRSPLHLAASRGY----EEIMTFLIQKGVDINLK 601 (821)
Q Consensus 532 ~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~------~g~~~n~~d~~g~t~L~~A~~~g~----~~~v~~Ll~~g~~~~~~ 601 (821)
++..+..|.||||.||..|+.++++.|+. .|++++.+|..|.||||+|+..|+ .+++++|+++|+++|.+
T Consensus 14 ~~~~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin~~ 93 (169)
T PHA02741 14 IAEKNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADINAQ 93 (169)
T ss_pred hhccccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCCCCC
Confidence 45667889999999999999999999864 368899999999999999999999 58999999999999999
Q ss_pred CC-CCCcHHHHHHHcCChHHHHHHHhcCCCCCcccccchhhHHHhcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcC
Q 003425 602 DN-FGNTPLLEAIKYGNDGAASLLVKEGASLNVEEAGSFLCTAVARGDSDLLKRVLSNGIDPNTRDYDLRTPLHVAASEG 680 (821)
Q Consensus 602 ~~-~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~T~Lh~A~~~g 680 (821)
+. .|.||||+|+..++.+++++|++. .|++++..|..|.||||.|+..|
T Consensus 94 ~~~~g~TpLh~A~~~~~~~iv~~Ll~~------------------------------~g~~~~~~n~~g~tpL~~A~~~~ 143 (169)
T PHA02741 94 EMLEGDTALHLAAHRRDHDLAEWLCCQ------------------------------PGIDLHFCNADNKSPFELAIDNE 143 (169)
T ss_pred CcCCCCCHHHHHHHcCCHHHHHHHHhC------------------------------CCCCCCcCCCCCCCHHHHHHHCC
Confidence 85 899999999988888777777652 24566777888899999999999
Q ss_pred cHHHHHHHHHcCCCC
Q 003425 681 LYLMAKLLVEAGASV 695 (821)
Q Consensus 681 ~~~~v~~Ll~~ga~~ 695 (821)
+.+++++|++.++..
T Consensus 144 ~~~iv~~L~~~~~~~ 158 (169)
T PHA02741 144 DVAMMQILREIVATS 158 (169)
T ss_pred CHHHHHHHHHHHHHh
Confidence 999999988876653
No 68
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.81 E-value=9.4e-20 Score=171.34 Aligned_cols=94 Identities=18% Similarity=0.171 Sum_probs=76.5
Q ss_pred ccchhhHHHhcCCH---HHHHHHHHCCCCCCCCC-CCCCcHHHHHHHcCcHHHHHHHHH-cCCCCCCCCCCCCCHHHHHH
Q 003425 636 AGSFLCTAVARGDS---DLLKRVLSNGIDPNTRD-YDLRTPLHVAASEGLYLMAKLLVE-AGASVFPKDRWGNTPLDEGR 710 (821)
Q Consensus 636 ~~t~l~~A~~~~~~---~~v~~Ll~~g~~~~~~d-~~g~T~Lh~A~~~g~~~~v~~Ll~-~ga~~~~~d~~g~t~l~~A~ 710 (821)
|.||||+|+..|+. +++++|+++|++++.+| ..|+||||+|+..|+.+++++|+. .|++++.+|..|.||||+|+
T Consensus 55 g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadin~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g~tpL~~A~ 134 (154)
T PHA02736 55 GKQCVHIVSNPDKADPQEKLKLLMEWGADINGKERVFGNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKTPYYVAC 134 (154)
T ss_pred CCEEEEeecccCchhHHHHHHHHHHcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCccccCCCCCHHHHHH
Confidence 44444444444443 35677888888888887 489999999999999999999997 48999999999999999999
Q ss_pred HcCCHHHHHHHHhcccccc
Q 003425 711 MCGNKNLIKLLEDAKSTQL 729 (821)
Q Consensus 711 ~~~~~~i~~~Ll~~~a~~~ 729 (821)
..|+.+++++|+++|++..
T Consensus 135 ~~~~~~i~~~Ll~~ga~~~ 153 (154)
T PHA02736 135 ERHDAKMMNILRAKGAQCK 153 (154)
T ss_pred HcCCHHHHHHHHHcCCCCC
Confidence 9999999999999998754
No 69
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.81 E-value=2e-19 Score=157.66 Aligned_cols=143 Identities=31% Similarity=0.312 Sum_probs=115.2
Q ss_pred hhhHHHHhhcCCHHHHHHHHHcCCC-CCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCh
Q 003425 540 ALKVNSAAYHGDLYQLEGLIRAGAD-PNRTDYDGRSPLHLAASRGYEEIMTFLIQKGVDINLKDNFGNTPLLEAIKYGND 618 (821)
Q Consensus 540 ~~~L~~A~~~g~~~~v~~Ll~~g~~-~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~tpL~~A~~~~~~ 618 (821)
.-.+.+|+..+.+..|+.||+..++ +|.+|.+|.||||-|+.+|+.++++.|+..|++++.+...|+||||-||..++.
T Consensus 64 ~rl~lwaae~nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~T~~GWTPLhSAckWnN~ 143 (228)
T KOG0512|consen 64 IRLLLWAAEKNRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEAKTNEGWTPLHSACKWNNF 143 (228)
T ss_pred HHHHHHHHhhccHHHHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHccCCcccccccCccchhhhhcccch
Confidence 3457789999999999999998877 899999999999999999999999999999999999999999999999998888
Q ss_pred HHHHHHHhcCCCCCcccccchhhHHHhcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCcH-HHHHHHHH-cCCCCC
Q 003425 619 GAASLLVKEGASLNVEEAGSFLCTAVARGDSDLLKRVLSNGIDPNTRDYDLRTPLHVAASEGLY-LMAKLLVE-AGASVF 696 (821)
Q Consensus 619 ~~v~~Ll~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~T~Lh~A~~~g~~-~~v~~Ll~-~ga~~~ 696 (821)
+++..|+++|+ |+|+......||||+||...+. ..+++|+. .+.++.
T Consensus 144 ~va~~LLqhga-------------------------------DVnA~t~g~ltpLhlaa~~rn~r~t~~~Ll~dryi~pg 192 (228)
T KOG0512|consen 144 EVAGRLLQHGA-------------------------------DVNAQTKGLLTPLHLAAGNRNSRDTLELLLHDRYIHPG 192 (228)
T ss_pred hHHHHHHhccC-------------------------------cccccccccchhhHHhhcccchHHHHHHHhhccccChh
Confidence 77777776655 5555555567777777765543 44555544 467777
Q ss_pred CCCCCCCCHHHHHHHcC
Q 003425 697 PKDRWGNTPLDEGRMCG 713 (821)
Q Consensus 697 ~~d~~g~t~l~~A~~~~ 713 (821)
.++..+.||+.+|.+.+
T Consensus 193 ~~nn~eeta~~iARRT~ 209 (228)
T KOG0512|consen 193 LKNNLEETAFDIARRTS 209 (228)
T ss_pred hhcCccchHHHHHHHhh
Confidence 77777888888777664
No 70
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.79 E-value=2.8e-19 Score=168.10 Aligned_cols=96 Identities=21% Similarity=0.221 Sum_probs=67.7
Q ss_pred CCCCCCcHHHHHHHcCChH---HHHHHHhcCCCCCcc---cccchhhHHHhcCCHHHHHHHHH-CCCCCCCCCCCCCcHH
Q 003425 601 KDNFGNTPLLEAIKYGNDG---AASLLVKEGASLNVE---EAGSFLCTAVARGDSDLLKRVLS-NGIDPNTRDYDLRTPL 673 (821)
Q Consensus 601 ~~~~g~tpL~~A~~~~~~~---~v~~Ll~~~~~~~~~---~~~t~l~~A~~~~~~~~v~~Ll~-~g~~~~~~d~~g~T~L 673 (821)
+|..|.||||+|+..|+.+ ++++|++.|++++.. +|.||||+|+..|+.+++++|++ .|++++.+|..|.|||
T Consensus 51 ~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadin~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g~tpL 130 (154)
T PHA02736 51 YNRHGKQCVHIVSNPDKADPQEKLKLLMEWGADINGKERVFGNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKTPY 130 (154)
T ss_pred hcCCCCEEEEeecccCchhHHHHHHHHHHcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCccccCCCCCHH
Confidence 3555555555555555542 355555555555542 24556666666666666666665 4788899999999999
Q ss_pred HHHHHcCcHHHHHHHHHcCCCCC
Q 003425 674 HVAASEGLYLMAKLLVEAGASVF 696 (821)
Q Consensus 674 h~A~~~g~~~~v~~Ll~~ga~~~ 696 (821)
|+|+..|+.+++++|+++|++.+
T Consensus 131 ~~A~~~~~~~i~~~Ll~~ga~~~ 153 (154)
T PHA02736 131 YVACERHDAKMMNILRAKGAQCK 153 (154)
T ss_pred HHHHHcCCHHHHHHHHHcCCCCC
Confidence 99999999999999999998875
No 71
>KOG4390 consensus Voltage-gated A-type K+ channel KCND [Inorganic ion transport and metabolism]
Probab=99.79 E-value=1e-21 Score=192.68 Aligned_cols=227 Identities=19% Similarity=0.245 Sum_probs=151.5
Q ss_pred ccccCCcCeEEcCCChh-HHHHHHHHHHHHHHHhhhccee---eeeec----------CCCcCeehhHHHHHHHHHHhHh
Q 003425 56 GFRHFSRNLVFHPDNRW-YRAWTKFILIWAVYSSIFTPVE---FGFFR----------GLSKNLYVLDIVGQIAFLFDIV 121 (821)
Q Consensus 56 ~~~~~~~~~~~~P~s~~-~~~w~~~~~~~~~~~~~~~p~~---~~f~~----------~~~~~~~~~~~~~~~~f~~Di~ 121 (821)
.+|.+.|+-..+|..+. ..++-.+.-+++..+++.-.+. -+... -....++.+|..|.++|..+++
T Consensus 166 s~rq~mWrAFENPHTst~ALVFYYVtGFFIAVSVi~NvVETiPCg~~~~~~~e~pCGEry~~aFFclDTACVmIFT~EYl 245 (632)
T KOG4390|consen 166 SLRQRMWRAFENPHTSTAALVFYYVTGFFIAVSVIANVVETIPCGGSPGRSKELPCGERYPVAFFCLDTACVMIFTGEYL 245 (632)
T ss_pred hHHHHHHHHhcCCCcchhhhhhhhhhhhhhhhhhhhceeeecccCCCCCCceecccccccceeeEEecceeEEEeeHHHH
Confidence 45677888889997654 3333333333333333322222 11111 1223478899999999999999
Q ss_pred heeeEEEEeCCceEEeeccHHHHHHHhhhh-hHHHHHhhhhHHHHHhhcCchhHHHHHHHHHHHHHHHHHHHHHhhhhhH
Q 003425 122 LQFCLAYRDSQTYRLICKRTPIALRYLRSS-FIIDLFSCMPWDLIYKASGRKEAVRYLLWIRLYRVRKVSQFFHKMEKDI 200 (821)
Q Consensus 122 l~f~t~y~~~~~~~~v~~~~~I~~~Ylk~~-f~iDlis~lP~~~~~~~~~~~~~~~~l~llrl~rl~r~~~~~~~~~~~~ 200 (821)
+| +...|.+ .+|+++- -+||+++++|+++-+.......+-..+..+|++|++|+.++.++.+...
T Consensus 246 LR------------L~aAPsR--~rF~RSvMSiIDVvAIlPYYigLv~t~N~DVSGaFVTLRVFRVFRIFKFSRHSQGLR 311 (632)
T KOG4390|consen 246 LR------------LFAAPSR--YRFLRSVMSIIDVVAILPYYIGLVMTDNEDVSGAFVTLRVFRVFRIFKFSRHSQGLR 311 (632)
T ss_pred HH------------HHcCchH--HHHHHHHHHHHHHhhhhhhheEEEecCCccccceeEEEEeeeeeeeeeecccccccc
Confidence 95 5566777 7899995 4999999999988766655555444444445555555555444444333
Q ss_pred hhhHHHH----HHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCceeccccCCCCCcccccccchHHHHHHHHHHHHHH
Q 003425 201 RINYMFS----RIVKLIAVELYCSHIAACIFYYLATTLPPEQEGYTWIGSLKMGDYSYADFREIGFWKSYITSMYASVVT 276 (821)
Q Consensus 201 ~~~~~~~----~~~~~~~~~l~~~h~~ac~~~~i~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~Y~~s~yw~~~t 276 (821)
-+.+... .+.-+++.+...+-++|.++||.+... +.+-|.+.+.+||+.++|
T Consensus 312 ILGYTLKSCASELGFLlFSLtMAIIIFATvMfYAEKg~------------------------~at~FTsIPaaFWYTIVT 367 (632)
T KOG4390|consen 312 ILGYTLKSCASELGFLLFSLTMAIIIFATVMFYAEKGS------------------------SATKFTSIPAAFWYTIVT 367 (632)
T ss_pred hhhhhHHHHHHHHhHHHHHHHHHHHHHHHHHHhhhccc------------------------cccccccCcHhHhhheee
Confidence 3333333 344444444555667777777765321 122255788999999999
Q ss_pred hhccccCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 003425 277 MTTVGYGDVHAVNLREMVFIMIYVSFDMILGAYLIGNMTALIVK 320 (821)
Q Consensus 277 ~tTvGyGdi~p~t~~e~~~~~~~~i~g~~~~a~~i~~i~~~~~~ 320 (821)
|||.||||++|.|..+++|..+|.+.|+++.|+++..|.+.++.
T Consensus 368 mTTLGYGDMVp~TIaGKIfGsiCSLSGVLVIALPVPvIVSNFSR 411 (632)
T KOG4390|consen 368 MTTLGYGDMVPSTIAGKIFGSICSLSGVLVIALPVPVIVSNFSR 411 (632)
T ss_pred eeeccccccchHHHHHHHhhhhhcccceEEEeccccEEEechhH
Confidence 99999999999999999999999999999999998777666654
No 72
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.79 E-value=1.2e-18 Score=189.27 Aligned_cols=237 Identities=21% Similarity=0.293 Sum_probs=182.4
Q ss_pred hhHHHHhhcCCHHHHHHHHHcC---------CCCCCCCCCCCcHHHHHHHc---CCHHHHHHHHHcCC----CCCCC-CC
Q 003425 541 LKVNSAAYHGDLYQLEGLIRAG---------ADPNRTDYDGRSPLHLAASR---GYEEIMTFLIQKGV----DINLK-DN 603 (821)
Q Consensus 541 ~~L~~A~~~g~~~~v~~Ll~~g---------~~~n~~d~~g~t~L~~A~~~---g~~~~v~~Ll~~g~----~~~~~-~~ 603 (821)
.++..|...|.++.+..+++.+ .+++.+...|.|+||.|..+ ++.++++.|++.-. |+-.. ..
T Consensus 103 ~~~~~~~~~~~l~~l~~l~~~~~~~k~r~~~w~~~~RGa~GET~Lh~~lL~~~~~~n~la~~LL~~~p~lind~~~~eeY 182 (782)
T KOG3676|consen 103 DALFIADSEGALSDLDGLLKFLRKSKYRLTDWKLNERGATGETLLHKALLNLSDGHNELARVLLEIFPKLINDIYTSEEY 182 (782)
T ss_pred hhhhhccccccHHHHhccchhhhhhhhhhhhhccccccchhhhHHHHHHhcCchhHHHHHHHHHHHhHHHhhhhhhhHhh
Confidence 5677788888888888887665 46777778899999999874 45688888888522 12111 24
Q ss_pred CCCcHHHHHHHcCChHHHHHHHhcCCCCCcc---------c----------------ccchhhHHHhcCCHHHHHHHHHC
Q 003425 604 FGNTPLLEAIKYGNDGAASLLVKEGASLNVE---------E----------------AGSFLCTAVARGDSDLLKRVLSN 658 (821)
Q Consensus 604 ~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~---------~----------------~~t~l~~A~~~~~~~~v~~Ll~~ 658 (821)
.|+||||.|+.+.+.++|++|++.|||++.+ + |..||..||..++.+++++|+++
T Consensus 183 ~GqSaLHiAIv~~~~~~V~lLl~~gADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~~ 262 (782)
T KOG3676|consen 183 YGQSALHIAIVNRDAELVRLLLAAGADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLAH 262 (782)
T ss_pred cCcchHHHHHHhccHHHHHHHHHcCCchhhHhhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHhc
Confidence 6999999999999999999999999998762 1 34699999999999999999999
Q ss_pred CCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHcCCC--CCCCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccCCCCC
Q 003425 659 GIDPNTRDYDLRTPLHVAASEGLYLMAKLLVEAGAS--VFPKDRWGNTPLDEGRMCGNKNLIKLLEDAKSTQLLEFPHGF 736 (821)
Q Consensus 659 g~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~ga~--~~~~d~~g~t~l~~A~~~~~~~i~~~Ll~~~a~~~~~~~~~~ 736 (821)
|+|++.+|..|+|.||..+..-..++..+++++|++ ...+|+.|-|||.+|++-|+.++.+.+++...........
T Consensus 263 gAd~~aqDS~GNTVLH~lVi~~~~~My~~~L~~ga~~l~~v~N~qgLTPLtLAaklGk~emf~~ile~~k~~~W~YGp-- 340 (782)
T KOG3676|consen 263 GADPNAQDSNGNTVLHMLVIHFVTEMYDLALELGANALEHVRNNQGLTPLTLAAKLGKKEMFQHILERRKFTDWAYGP-- 340 (782)
T ss_pred CCCCCccccCCChHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCChHHHHHHhhhHHHHHHHHHhhcccceeecc--
Confidence 999999999999999999999999999999999999 8899999999999999999999999999985333332211
Q ss_pred CccccccCCCCcccccCCCCCCcc-cc----------ccCceEEEcCccHHHHHHHHHhHcCCC
Q 003425 737 QDTADKRNPTRKCTVFPFHPWDAK-ES----------RRHGIVLWIPQNIKDLIKTAAEQLDFR 789 (821)
Q Consensus 737 ~~~~~~~~~~~~~~~~~~~~~~~~-~~----------~~~~~~~~lp~~~~~l~~~~~~~~~~~ 789 (821)
..++.+|+...+.. +. .....+..+.+-+++|++..+++|+-.
T Consensus 341 ----------vtsslYpL~~iDT~~n~~SvLeivvyg~~~eHl~Ll~~~i~~LL~~KW~~f~k~ 394 (782)
T KOG3676|consen 341 ----------VTSSLYPLNSIDTIGNENSVLEIVVYGIKNEHLELLDGPIEELLEDKWKAFGKK 394 (782)
T ss_pred ----------cccccccchhcccccchhhhhhhhhcCCcHHHHHHHhHHHHHHHHHHHHHHhHH
Confidence 12222232222222 00 111122345567899999999988764
No 73
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.77 E-value=3.9e-19 Score=168.28 Aligned_cols=133 Identities=30% Similarity=0.396 Sum_probs=92.0
Q ss_pred CCCCCCCCCCcHHHHHHHcCChHHHHHHHhcCCCCCccc--ccchhhHHHhcCCHHHHHHHHHCCCCCCCCCCCCCcHHH
Q 003425 597 DINLKDNFGNTPLLEAIKYGNDGAASLLVKEGASLNVEE--AGSFLCTAVARGDSDLLKRVLSNGIDPNTRDYDLRTPLH 674 (821)
Q Consensus 597 ~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~--~~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~T~Lh 674 (821)
|.|.-|..|.+|||+||+.|+..+++.|+..|+.+|..+ ..||||+|+.+|+.++|+.|++..+|+|+.+..|+||||
T Consensus 26 dln~gddhgfsplhwaakegh~aivemll~rgarvn~tnmgddtplhlaaahghrdivqkll~~kadvnavnehgntplh 105 (448)
T KOG0195|consen 26 DLNVGDDHGFSPLHWAAKEGHVAIVEMLLSRGARVNSTNMGDDTPLHLAAAHGHRDIVQKLLSRKADVNAVNEHGNTPLH 105 (448)
T ss_pred ccccccccCcchhhhhhhcccHHHHHHHHhcccccccccCCCCcchhhhhhcccHHHHHHHHHHhcccchhhccCCCchh
Confidence 344444444444444444444444444444444444332 234555555555556666666677788999999999999
Q ss_pred HHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcccccc
Q 003425 675 VAASEGLYLMAKLLVEAGASVFPKDRWGNTPLDEGRMCGNKNLIKLLEDAKSTQL 729 (821)
Q Consensus 675 ~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~i~~~Ll~~~a~~~ 729 (821)
+||..|...+++-|+..||.+++.|++|.||++.|.-.-...+.+.-.++|-+++
T Consensus 106 yacfwgydqiaedli~~ga~v~icnk~g~tpldkakp~l~~~l~e~aek~gq~~n 160 (448)
T KOG0195|consen 106 YACFWGYDQIAEDLISCGAAVNICNKKGMTPLDKAKPMLKNTLLEIAEKHGQSPN 160 (448)
T ss_pred hhhhhcHHHHHHHHHhccceeeecccCCCCchhhhchHHHHHHHHHHHHhCCCCC
Confidence 9999999999999999999999999999999998876555555666667777665
No 74
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=99.74 E-value=1.8e-18 Score=189.65 Aligned_cols=207 Identities=23% Similarity=0.264 Sum_probs=170.2
Q ss_pred chhhhHhhhHHHHhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCC-CCCCCcHHHHH
Q 003425 534 KHEAELALKVNSAAYHGDLYQLEGLIRAGADPNRTDYDGRSPLHLAASRGYEEIMTFLIQKGVDINLK-DNFGNTPLLEA 612 (821)
Q Consensus 534 ~~~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~-~~~g~tpL~~A 612 (821)
..+.+..|+|-.||..|+.|.+++|+.+|+++..+|..|.+||.+|+..||..+|+.|+++.++++.+ |..+.|+|.+|
T Consensus 752 ~Te~n~~t~LT~acaggh~e~vellv~rganiehrdkkgf~plImaatagh~tvV~~llk~ha~veaQsdrtkdt~lSla 831 (2131)
T KOG4369|consen 752 LTEPNIKTNLTSACAGGHREEVELLVVRGANIEHRDKKGFVPLIMAATAGHITVVQDLLKAHADVEAQSDRTKDTMLSLA 831 (2131)
T ss_pred ccCccccccccccccCccHHHHHHHHHhcccccccccccchhhhhhcccCchHHHHHHHhhhhhhhhhcccccCceEEEe
Confidence 44566789999999999999999999999999999999999999999999999999999998888765 56788999999
Q ss_pred HHcCChHHHHHHHhcCCCCCccc--ccchhhHHHhcCCHHHHHHHHHCCCCCCCCC--CCCCcHHHHHHHcCcHHHHHHH
Q 003425 613 IKYGNDGAASLLVKEGASLNVEE--AGSFLCTAVARGDSDLLKRVLSNGIDPNTRD--YDLRTPLHVAASEGLYLMAKLL 688 (821)
Q Consensus 613 ~~~~~~~~v~~Ll~~~~~~~~~~--~~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~d--~~g~T~Lh~A~~~g~~~~v~~L 688 (821)
|..|+.++|++|+.+|++-..++ ..|||.+|...|..++++.|+.+|+.+|.+. +.|-.||++|..+|+.+.++.|
T Consensus 832 csggr~~vvelLl~~gankehrnvsDytPlsla~Sggy~~iI~~llS~GseInSrtgSklgisPLmlatmngh~~at~~l 911 (2131)
T KOG4369|consen 832 CSGGRTRVVELLLNAGANKEHRNVSDYTPLSLARSGGYTKIIHALLSSGSEINSRTGSKLGISPLMLATMNGHQAATLSL 911 (2131)
T ss_pred cCCCcchHHHHHHHhhccccccchhhcCchhhhcCcchHHHHHHHhhcccccccccccccCcchhhhhhhccccHHHHHH
Confidence 99999999999999988766554 5688888888888888888888888887654 5678888888888888888888
Q ss_pred HHcCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHhccccccccCCCCCCccc
Q 003425 689 VEAGASVFPK-DRWGNTPLDEGRMCGNKNLIKLLEDAKSTQLLEFPHGFQDTA 740 (821)
Q Consensus 689 l~~ga~~~~~-d~~g~t~l~~A~~~~~~~i~~~Ll~~~a~~~~~~~~~~~~~~ 740 (821)
++.|.|+|.. ..+-+|+|-+|+-.|..+++.+||.+.++...+.+.|.+++.
T Consensus 912 l~~gsdiNaqIeTNrnTaltla~fqgr~evv~lLLa~~anvehRaktgltplm 964 (2131)
T KOG4369|consen 912 LQPGSDINAQIETNRNTALTLALFQGRPEVVFLLLAAQANVEHRAKTGLTPLM 964 (2131)
T ss_pred hcccchhccccccccccceeeccccCcchHHHHHHHHhhhhhhhcccCCcccc
Confidence 8887777754 245567777777777777777777777777766666666654
No 75
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=99.73 E-value=4.6e-18 Score=186.56 Aligned_cols=202 Identities=25% Similarity=0.234 Sum_probs=188.4
Q ss_pred ccccchhhhHhhhHHHHhhcCCHHHHHHHHHcCCCCCCC-CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcH
Q 003425 530 FHISKHEAELALKVNSAAYHGDLYQLEGLIRAGADPNRT-DYDGRSPLHLAASRGYEEIMTFLIQKGVDINLKDNFGNTP 608 (821)
Q Consensus 530 ~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~n~~-d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~tp 608 (821)
.++..+|..|-+||..|+-.||..+|+.|+++.++++.. |..+.|+|.+||..|+.++|++||.+|++-..++-...||
T Consensus 781 aniehrdkkgf~plImaatagh~tvV~~llk~ha~veaQsdrtkdt~lSlacsggr~~vvelLl~~gankehrnvsDytP 860 (2131)
T KOG4369|consen 781 ANIEHRDKKGFVPLIMAATAGHITVVQDLLKAHADVEAQSDRTKDTMLSLACSGGRTRVVELLLNAGANKEHRNVSDYTP 860 (2131)
T ss_pred ccccccccccchhhhhhcccCchHHHHHHHhhhhhhhhhcccccCceEEEecCCCcchHHHHHHHhhccccccchhhcCc
Confidence 345678889999999999999999999999999998865 7789999999999999999999999999998899889999
Q ss_pred HHHHHHcCChHHHHHHHhcCCCCCccc----ccchhhHHHhcCCHHHHHHHHHCCCCCCCCC-CCCCcHHHHHHHcCcHH
Q 003425 609 LLEAIKYGNDGAASLLVKEGASLNVEE----AGSFLCTAVARGDSDLLKRVLSNGIDPNTRD-YDLRTPLHVAASEGLYL 683 (821)
Q Consensus 609 L~~A~~~~~~~~v~~Ll~~~~~~~~~~----~~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~d-~~g~T~Lh~A~~~g~~~ 683 (821)
|.+|...|..++++.|+.+|+.+|.+. |-+||++|..+|+...++.|++.|.|+|..- .+.+|+|-+|+-.|..+
T Consensus 861 lsla~Sggy~~iI~~llS~GseInSrtgSklgisPLmlatmngh~~at~~ll~~gsdiNaqIeTNrnTaltla~fqgr~e 940 (2131)
T KOG4369|consen 861 LSLARSGGYTKIIHALLSSGSEINSRTGSKLGISPLMLATMNGHQAATLSLLQPGSDINAQIETNRNTALTLALFQGRPE 940 (2131)
T ss_pred hhhhcCcchHHHHHHHhhcccccccccccccCcchhhhhhhccccHHHHHHhcccchhccccccccccceeeccccCcch
Confidence 999999999999999999999999865 5589999999999999999999999999653 46789999999999999
Q ss_pred HHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcccccccc
Q 003425 684 MAKLLVEAGASVFPKDRWGNTPLDEGRMCGNKNLIKLLEDAKSTQLLE 731 (821)
Q Consensus 684 ~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~i~~~Ll~~~a~~~~~ 731 (821)
++.+||.+.+++..+-+.|.|||.-++..|..|+-++|+.+|||.+..
T Consensus 941 vv~lLLa~~anvehRaktgltplme~AsgGyvdvg~~li~~gad~nas 988 (2131)
T KOG4369|consen 941 VVFLLLAAQANVEHRAKTGLTPLMEMASGGYVDVGNLLIAAGADTNAS 988 (2131)
T ss_pred HHHHHHHHhhhhhhhcccCCcccchhhcCCccccchhhhhcccccccC
Confidence 999999999999999999999999999999999999999999998754
No 76
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.71 E-value=1.4e-17 Score=157.78 Aligned_cols=121 Identities=30% Similarity=0.379 Sum_probs=85.4
Q ss_pred hhcccccccccchhhhHhhhHHHHhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Q 003425 523 QLQSDITFHISKHEAELALKVNSAAYHGDLYQLEGLIRAGADPNRTDYDGRSPLHLAASRGYEEIMTFLIQKGVDINLKD 602 (821)
Q Consensus 523 ~l~~~~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~ 602 (821)
.+-.+.+-+.+..|..|-+|||+||+.|+..+++.|+.+|+.+|..+....||||+|+..||-++|+.|++..+|+|..+
T Consensus 18 lwld~tehdln~gddhgfsplhwaakegh~aivemll~rgarvn~tnmgddtplhlaaahghrdivqkll~~kadvnavn 97 (448)
T KOG0195|consen 18 LWLDDTEHDLNVGDDHGFSPLHWAAKEGHVAIVEMLLSRGARVNSTNMGDDTPLHLAAAHGHRDIVQKLLSRKADVNAVN 97 (448)
T ss_pred EEecCcccccccccccCcchhhhhhhcccHHHHHHHHhcccccccccCCCCcchhhhhhcccHHHHHHHHHHhcccchhh
Confidence 33334444556677777778888888888888888887787777777777778888888888888888887777788777
Q ss_pred CCCCcHHHHHHHcCChHHHHHHHhcCCCCCc--ccccchhhHH
Q 003425 603 NFGNTPLLEAIKYGNDGAASLLVKEGASLNV--EEAGSFLCTA 643 (821)
Q Consensus 603 ~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~--~~~~t~l~~A 643 (821)
..|+|||||||..|...+++-|++.|+.++. +.|.||+..|
T Consensus 98 ehgntplhyacfwgydqiaedli~~ga~v~icnk~g~tpldka 140 (448)
T KOG0195|consen 98 EHGNTPLHYACFWGYDQIAEDLISCGAAVNICNKKGMTPLDKA 140 (448)
T ss_pred ccCCCchhhhhhhcHHHHHHHHHhccceeeecccCCCCchhhh
Confidence 7778888877777777777777666655443 2344554443
No 77
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.71 E-value=8e-17 Score=141.42 Aligned_cols=145 Identities=23% Similarity=0.275 Sum_probs=113.6
Q ss_pred HHHHHHHhcCCcchhhhhhhcccccccccchhhhHhhhHHHHhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCC
Q 003425 505 RKVLTNLLQGKESDLRLKQLQSDITFHISKHEAELALKVNSAAYHGDLYQLEGLIRAGADPNRTDYDGRSPLHLAASRGY 584 (821)
Q Consensus 505 ~~~l~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~g~ 584 (821)
..++-.+............+.... -+++.+|.++.||||-|+.+|++++|+.|+..|++++++...|+||||-||.-++
T Consensus 64 ~rl~lwaae~nrl~eV~~lL~e~a-n~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~T~~GWTPLhSAckWnN 142 (228)
T KOG0512|consen 64 IRLLLWAAEKNRLTEVQRLLSEKA-NHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEAKTNEGWTPLHSACKWNN 142 (228)
T ss_pred HHHHHHHHhhccHHHHHHHHHhcc-ccccccccccccHHHHHHhcCchHHHHHHHHccCCcccccccCccchhhhhcccc
Confidence 334444444444444555555444 4688999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCChH-HHHHHHhcCCCCCcccccchhhHHHhcCCHHHHHHHHHCCCCCC
Q 003425 585 EEIMTFLIQKGVDINLKDNFGNTPLLEAIKYGNDG-AASLLVKEGASLNVEEAGSFLCTAVARGDSDLLKRVLSNGIDPN 663 (821)
Q Consensus 585 ~~~v~~Ll~~g~~~~~~~~~g~tpL~~A~~~~~~~-~v~~Ll~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~g~~~~ 663 (821)
.+++-.||++|+|+|+......||||.||...+.. .+++|+. ..+.++-
T Consensus 143 ~~va~~LLqhgaDVnA~t~g~ltpLhlaa~~rn~r~t~~~Ll~------------------------------dryi~pg 192 (228)
T KOG0512|consen 143 FEVAGRLLQHGADVNAQTKGLLTPLHLAAGNRNSRDTLELLLH------------------------------DRYIHPG 192 (228)
T ss_pred hhHHHHHHhccCcccccccccchhhHHhhcccchHHHHHHHhh------------------------------ccccChh
Confidence 99999999999999999999999999999876543 3344433 2344555
Q ss_pred CCCCCCCcHHHHHHHcC
Q 003425 664 TRDYDLRTPLHVAASEG 680 (821)
Q Consensus 664 ~~d~~g~T~Lh~A~~~g 680 (821)
..+..+.||+.+|-+.+
T Consensus 193 ~~nn~eeta~~iARRT~ 209 (228)
T KOG0512|consen 193 LKNNLEETAFDIARRTS 209 (228)
T ss_pred hhcCccchHHHHHHHhh
Confidence 56666777777776654
No 78
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.69 E-value=1.4e-16 Score=134.32 Aligned_cols=89 Identities=40% Similarity=0.567 Sum_probs=80.9
Q ss_pred HHHHhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCChHHHH
Q 003425 543 VNSAAYHGDLYQLEGLIRAGADPNRTDYDGRSPLHLAASRGYEEIMTFLIQKGVDINLKDNFGNTPLLEAIKYGNDGAAS 622 (821)
Q Consensus 543 L~~A~~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~tpL~~A~~~~~~~~v~ 622 (821)
||.||..|+.++++.|++.+.+++. |.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.++++
T Consensus 1 L~~A~~~~~~~~~~~ll~~~~~~~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~ 76 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLEKGADINL----GNTALHYAAENGNLEIVKLLLENGADINSQDKNGNTALHYAAENGNLEIVK 76 (89)
T ss_dssp HHHHHHTTTHHHHHHHHHTTSTTTS----SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BSTTSSBHHHHHHHTTHHHHHH
T ss_pred CHHHHHcCCHHHHHHHHHCcCCCCC----CCCHHHHHHHcCCHHHHHHHHHhcccccccCCCCCCHHHHHHHcCCHHHHH
Confidence 7899999999999999999988877 889999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCCccc
Q 003425 623 LLVKEGASLNVEE 635 (821)
Q Consensus 623 ~Ll~~~~~~~~~~ 635 (821)
+|+++|++++.++
T Consensus 77 ~Ll~~g~~~~~~n 89 (89)
T PF12796_consen 77 LLLEHGADVNIRN 89 (89)
T ss_dssp HHHHTTT-TTSS-
T ss_pred HHHHcCCCCCCcC
Confidence 9999999887653
No 79
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.68 E-value=2.1e-16 Score=133.34 Aligned_cols=87 Identities=34% Similarity=0.459 Sum_probs=39.9
Q ss_pred HHHHHcCChHHHHHHHhcCCCCCcccccchhhHHHhcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHH
Q 003425 610 LEAIKYGNDGAASLLVKEGASLNVEEAGSFLCTAVARGDSDLLKRVLSNGIDPNTRDYDLRTPLHVAASEGLYLMAKLLV 689 (821)
Q Consensus 610 ~~A~~~~~~~~v~~Ll~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll 689 (821)
|+|+..|+.+++++|++.+.+++. |.||+|+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+
T Consensus 2 ~~A~~~~~~~~~~~ll~~~~~~~~--~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll 79 (89)
T PF12796_consen 2 HIAAQNGNLEILKFLLEKGADINL--GNTALHYAAENGNLEIVKLLLENGADINSQDKNGNTALHYAAENGNLEIVKLLL 79 (89)
T ss_dssp HHHHHTTTHHHHHHHHHTTSTTTS--SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BSTTSSBHHHHHHHTTHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHCcCCCCC--CCCHHHHHHHcCCHHHHHHHHHhcccccccCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 344444444444444443333333 333444444444444444444444455555555555555555555555555555
Q ss_pred HcCCCCCCC
Q 003425 690 EAGASVFPK 698 (821)
Q Consensus 690 ~~ga~~~~~ 698 (821)
++|++++.+
T Consensus 80 ~~g~~~~~~ 88 (89)
T PF12796_consen 80 EHGADVNIR 88 (89)
T ss_dssp HTTT-TTSS
T ss_pred HcCCCCCCc
Confidence 555555544
No 80
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.66 E-value=9.1e-16 Score=167.10 Aligned_cols=186 Identities=23% Similarity=0.255 Sum_probs=154.9
Q ss_pred ccccccchhhhHhhhHHHHhh---cCCHHHHHHHHHcCCC-CCCC----CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC
Q 003425 528 ITFHISKHEAELALKVNSAAY---HGDLYQLEGLIRAGAD-PNRT----DYDGRSPLHLAASRGYEEIMTFLIQKGVDIN 599 (821)
Q Consensus 528 ~~~~~~~~~~~~~~~L~~A~~---~g~~~~v~~Ll~~g~~-~n~~----d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~ 599 (821)
.+-.++.+...|.|.||.|.. .++.++++.|++.-.. +|.. ...|.||||+|+.+.+.++|++|++.|||++
T Consensus 132 ~~w~~~~RGa~GET~Lh~~lL~~~~~~n~la~~LL~~~p~lind~~~~eeY~GqSaLHiAIv~~~~~~V~lLl~~gADV~ 211 (782)
T KOG3676|consen 132 TDWKLNERGATGETLLHKALLNLSDGHNELARVLLEIFPKLINDIYTSEEYYGQSALHIAIVNRDAELVRLLLAAGADVH 211 (782)
T ss_pred hhhccccccchhhhHHHHHHhcCchhHHHHHHHHHHHhHHHhhhhhhhHhhcCcchHHHHHHhccHHHHHHHHHcCCchh
Confidence 345566778899999999987 4566899999987433 2322 3579999999999999999999999999987
Q ss_pred CC---------CC--------------CCCcHHHHHHHcCChHHHHHHHhcCCCCCccc--ccchhhHHHhcCCHHHHHH
Q 003425 600 LK---------DN--------------FGNTPLLEAIKYGNDGAASLLVKEGASLNVEE--AGSFLCTAVARGDSDLLKR 654 (821)
Q Consensus 600 ~~---------~~--------------~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~--~~t~l~~A~~~~~~~~v~~ 654 (821)
++ |. .|..||-.||..++.+++++|+++|+|++..| |+|.||..+..-..++..+
T Consensus 212 aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~~gAd~~aqDS~GNTVLH~lVi~~~~~My~~ 291 (782)
T KOG3676|consen 212 ARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLAHGADPNAQDSNGNTVLHMLVIHFVTEMYDL 291 (782)
T ss_pred hHhhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHhcCCCCCccccCCChHHHHHHHHHHHHHHHH
Confidence 54 11 37789999999999999999999999999875 8999999999999999999
Q ss_pred HHHCCCC--CCCCCCCCCcHHHHHHHcCcHHHHHHHHHc-C-------------CCCCCCCC--CCCCHHHHHHHcC
Q 003425 655 VLSNGID--PNTRDYDLRTPLHVAASEGLYLMAKLLVEA-G-------------ASVFPKDR--WGNTPLDEGRMCG 713 (821)
Q Consensus 655 Ll~~g~~--~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~-g-------------a~~~~~d~--~g~t~l~~A~~~~ 713 (821)
++++|++ ...+|..|-|||.+||..|+.++.+.+++. + -+.+..|. +-+++|.+.+...
T Consensus 292 ~L~~ga~~l~~v~N~qgLTPLtLAaklGk~emf~~ile~~k~~~W~YGpvtsslYpL~~iDT~~n~~SvLeivvyg~ 368 (782)
T KOG3676|consen 292 ALELGANALEHVRNNQGLTPLTLAAKLGKKEMFQHILERRKFTDWAYGPVTSSLYPLNSIDTIGNENSVLEIVVYGI 368 (782)
T ss_pred HHhcCCCccccccccCCCChHHHHHHhhhHHHHHHHHHhhcccceeecccccccccchhcccccchhhhhhhhhcCC
Confidence 9999999 889999999999999999999999999987 1 23344443 3456777776553
No 81
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.64 E-value=3.7e-15 Score=135.00 Aligned_cols=124 Identities=46% Similarity=0.648 Sum_probs=93.2
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCChHHHHHHHhcCCCCCcccccchhhHHHhcC
Q 003425 568 TDYDGRSPLHLAASRGYEEIMTFLIQKGVDINLKDNFGNTPLLEAIKYGNDGAASLLVKEGASLNVEEAGSFLCTAVARG 647 (821)
Q Consensus 568 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~t~l~~A~~~~ 647 (821)
.|.+|.||||+|+..|+.+++++|++.|.+.+..+..|.||+|.|+..++.+++++|++
T Consensus 3 ~~~~g~t~l~~a~~~~~~~~i~~li~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~--------------------- 61 (126)
T cd00204 3 RDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLE--------------------- 61 (126)
T ss_pred cCcCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHH---------------------
Confidence 34566777777777777777777777776666666666666666666665555555555
Q ss_pred CHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH
Q 003425 648 DSDLLKRVLSNGIDPNTRDYDLRTPLHVAASEGLYLMAKLLVEAGASVFPKDRWGNTPLDEGRMCGNKNLIKLLE 722 (821)
Q Consensus 648 ~~~~v~~Ll~~g~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~i~~~Ll 722 (821)
.|++++..+..|.||+|.|+..++.+++++|+++|.+++..|..|.||+++|...++.+++++|+
T Consensus 62 ----------~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll 126 (126)
T cd00204 62 ----------KGADVNARDKDGNTPLHLAARNGNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNGHLEVVKLLL 126 (126)
T ss_pred ----------cCCCccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCHHHHHHhC
Confidence 45556667777888999998888888999998888888888888889999998888888888874
No 82
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.63 E-value=6.2e-15 Score=133.49 Aligned_cols=124 Identities=45% Similarity=0.638 Sum_probs=107.2
Q ss_pred hhhhHhhhHHHHhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHH
Q 003425 535 HEAELALKVNSAAYHGDLYQLEGLIRAGADPNRTDYDGRSPLHLAASRGYEEIMTFLIQKGVDINLKDNFGNTPLLEAIK 614 (821)
Q Consensus 535 ~~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~tpL~~A~~ 614 (821)
.+..|.||||.|+..|+.++++.|++.|.+.+..+..|.||||.|+..++.+++++|++.|++++..+..|.||+|+|+.
T Consensus 3 ~~~~g~t~l~~a~~~~~~~~i~~li~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~l~~a~~ 82 (126)
T cd00204 3 RDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARDKDGNTPLHLAAR 82 (126)
T ss_pred cCcCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHH
Confidence 34678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCChHHHHHHHhcCCCCCcccccchhhHHHhcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHH
Q 003425 615 YGNDGAASLLVKEGASLNVEEAGSFLCTAVARGDSDLLKRVLSNGIDPNTRDYDLRTPLHVAASEGLYLMAKLLV 689 (821)
Q Consensus 615 ~~~~~~v~~Ll~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll 689 (821)
.++.+++++|++++ .+++..|..|.||++.|+..++.+++++|+
T Consensus 83 ~~~~~~~~~L~~~~-------------------------------~~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll 126 (126)
T cd00204 83 NGNLDVVKLLLKHG-------------------------------ADVNARDKDGRTPLHLAAKNGHLEVVKLLL 126 (126)
T ss_pred cCcHHHHHHHHHcC-------------------------------CCCcccCCCCCCHHHHHHhcCCHHHHHHhC
Confidence 88888888777765 445556666777777777777777777663
No 83
>PF11834 DUF3354: Domain of unknown function (DUF3354); InterPro: IPR021789 Potassium channels take part in important processes of higher plants, including opening and closing of stomatal pores and leaf movement. Inward rectifying potassium (K(+)in) channels play an important role in turgor regulation and ion uptake in higher plants. All of them comprise, from their N-terminal to their C-terminal ends: a short hydrophilic region, a hydrophobic region structurally analogous and partially homologous to the transmembrane domain of voltage-gated animal channels from the Shaker superfamily, a putative cyclic nucleotide-binding domain, and a conserved C-terminal KHA domain. Between these last two regions, some of them (AKT1, AKT2 and SKT1) contain an ankyrin-repeat domain with six repeats homologous to those of human erythrocyte ankyrin. This entry represents the KHA domain which is unique to plant K(+)in channels. The KHA domain contains two high-homology blocks enriched for hydrophobic and acidic residues, respectively. The KHA domain is essential for interaction of plant K(+)in channels. The KHA domain mediates tetramerization and/or stabilisation of the heteromers [, , ].
Probab=99.58 E-value=4.7e-15 Score=112.53 Aligned_cols=68 Identities=38% Similarity=0.851 Sum_probs=62.7
Q ss_pred CcccccCCCCCCccccccCceEEEcCccHHHHHHHHHhHcCCCCCcccccCCCceeeeeeeeecCCeEEEe
Q 003425 747 RKCTVFPFHPWDAKESRRHGIVLWIPQNIKDLIKTAAEQLDFRGGDCILSSEGGKILDVDMINDDQKLYLI 817 (821)
Q Consensus 747 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~r~~~~~~~~ 817 (821)
.++++.++||+.. .+..|+++++|++++||+++++++||+. +++++++||+||+||++|||||+||++
T Consensus 2 ~RVtI~~~~~~~~--~~~~GKvi~lP~SleeLl~ia~~kfg~~-~~~v~~~dgaeIdDI~~IRDgD~L~~~ 69 (69)
T PF11834_consen 2 KRVTIFPNHPPEK--GRRAGKVIWLPDSLEELLKIASEKFGFS-ATKVLNEDGAEIDDIDVIRDGDHLYLV 69 (69)
T ss_pred cEEEEecCCCCcc--cCcCCEEEEcCccHHHHHHHHHHHhCCC-ceEEEcCCCCEEeEEEEEEcCCEEEEC
Confidence 5688888999887 5567999999999999999999999996 799999999999999999999999985
No 84
>PRK09392 ftrB transcriptional activator FtrB; Provisional
Probab=99.56 E-value=2.5e-14 Score=145.08 Aligned_cols=126 Identities=19% Similarity=0.254 Sum_probs=118.6
Q ss_pred hhccccccccCCCHHHHHHHHHhcccccccccCeEEccCCccCeEEEEEeeEEEEEeeccCCccceEEEeCCCCcccccc
Q 003425 387 PYIEKVPLFKGCSSEFINQIVIRLHEEFFLPGEVIMEKGNVVDQLYFVCLGKLEEVGIEENGTEDYVSYLHPNSSFGEVS 466 (821)
Q Consensus 387 ~~l~~~~~f~~~~~~~l~~l~~~~~~~~~~~~e~I~~~g~~~~~ly~I~~G~v~~~~~~~~g~~~~i~~l~~G~~fGe~~ 466 (821)
++++..++|..++++.+..+....+.+.|++|++|+++|+.++.+|+|.+|.++++... +|++.++..+.+|++||+.+
T Consensus 7 ~~l~~~~~f~~L~~~~~~~l~~~~~~~~~~~ge~l~~~g~~~~~~~~v~~G~v~~~~~~-~~~~~~i~~~~~g~~~g~~~ 85 (236)
T PRK09392 7 IRLRNLPLFADMADATFERLMRGAFLQRFPPGTMLITEGEPADFLFVVLDGLVELSASS-QDRETTLAILRPVSTFILAA 85 (236)
T ss_pred HHHhcCccccCCCHHHHHHHHhhcceeecCCCCEEEeCCCccceEEEEEeCEEEEEEcC-CCceEEEEEeCCCchhhhHH
Confidence 57889999999999999999999999999999999999999999999999999999754 66778899999999999999
Q ss_pred ccccCCcceEEEEecceEEEEechHhHHHHHHHhhhchHHHHHHHhc
Q 003425 467 ILCNIPQPYTVQVCELCRLLRIDKQSFTNIIDIYFCDGRKVLTNLLQ 513 (821)
Q Consensus 467 ~~~~~~~~~~~~a~~~~~~~~i~~~~f~~~l~~~p~~~~~~l~~~l~ 513 (821)
++.+.++.++++|.++|+++.|++++|.+++.++|.+...+++.+..
T Consensus 86 ~~~~~~~~~~~~A~~~~~~~~i~~~~~~~l~~~~p~l~~~~~~~l~~ 132 (236)
T PRK09392 86 VVLDAPYLMSARTLTRSRVLMIPAELVREAMSEDPGFMRAVVFELAG 132 (236)
T ss_pred HhCCCCCceEEEEcCceEEEEEeHHHHHHHHHHCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999988877764
No 85
>PF00520 Ion_trans: Ion transport protein calcium channel signature potassium channel signature sodium channel signature; InterPro: IPR005821 This group of proteins is found in sodium, potassium, and calcium ion channels proteins. The proteins have 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some Na channels proteins the domain is repeated four times, whereas in others (e.g. K channels) the protein forms a tetramer in the membrane. A bacterial structure of the protein is known for the last two helices but is not included in the Pfam family due to it lacking the first four helices. ; GO: 0005216 ion channel activity, 0006811 ion transport, 0055085 transmembrane transport, 0016020 membrane; PDB: 3VMX_B 1QG9_A 1UJL_A 2LE7_A 2LCM_A 3A2A_A 3RW0_A 4EKW_A 3RVY_B 3RVZ_B ....
Probab=99.55 E-value=2.2e-14 Score=141.91 Aligned_cols=187 Identities=24% Similarity=0.309 Sum_probs=129.9
Q ss_pred hhHHHHHHHHHHhHhheeeEEEEeCCceEEeeccHHHHHHHhhh-hhHHHHHhhhhHHHHHhhc--Cch---hHHHHHHH
Q 003425 107 VLDIVGQIAFLFDIVLQFCLAYRDSQTYRLICKRTPIALRYLRS-SFIIDLFSCMPWDLIYKAS--GRK---EAVRYLLW 180 (821)
Q Consensus 107 ~~~~~~~~~f~~Di~l~f~t~y~~~~~~~~v~~~~~I~~~Ylk~-~f~iDlis~lP~~~~~~~~--~~~---~~~~~l~l 180 (821)
++|.+++++|++|+++++++.... +++|+++ |.++|+++++|..+..... +.. ..++.+++
T Consensus 1 ~~~~~~~~~f~~e~~l~~~~~~~~-------------~~~y~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 67 (200)
T PF00520_consen 1 ILEIIFDVIFILEIVLRFFALGFK-------------RRRYFRSWWNWFDFISVIPSIVSVILRSYGSASAQSLLRIFRL 67 (200)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCCG--------------GCCCCSHHHHHHHHHHHHHCCHHCCHCSS--HHCHCHHHHHH
T ss_pred CChHHHHHHHHHHHHHHHHHhccH-------------HHHHhcChhhcccccccccccccccccccccccccceEEEEEe
Confidence 478999999999999998655432 4789998 5689999999985544322 111 24556666
Q ss_pred HHHHHHHHHHHHHHhhhhhH-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCceeccccCCCCCcccccc
Q 003425 181 IRLYRVRKVSQFFHKMEKDI-RINYMFSRIVKLIAVELYCSHIAACIFYYLATTLPPEQEGYTWIGSLKMGDYSYADFRE 259 (821)
Q Consensus 181 lrl~rl~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~h~~ac~~~~i~~~~~~~~~~~~w~~~~~~~~~~~~~~~~ 259 (821)
+|++|+.|+.+..+.+.... .......++.+.+..++++.|++||+++.+............ .........
T Consensus 68 l~~~R~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~a~~~~~lf~~~~~~~~~~~--------~~~~~~~~~ 139 (200)
T PF00520_consen 68 LRLLRLLRLLRRFRSLRRLLRALIRSFPDLFKFILLLFIVLLFFACIGYQLFGGSDNSCCDPT--------WDSENDIYG 139 (200)
T ss_dssp HHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTS---------------SS----SST
T ss_pred eccccccccccccccccccccccccccccccccccccccccccccchhheecccccccccccc--------ccccccccc
Confidence 66666666666555554432 234556678899999999999999999988764332211101 001112233
Q ss_pred cchHHHHHHHHHHHHHHhhccccCccccC-----ChhHHHHH-HHHHHHHHHHHHHHHHHH
Q 003425 260 IGFWKSYITSMYASVVTMTTVGYGDVHAV-----NLREMVFI-MIYVSFDMILGAYLIGNM 314 (821)
Q Consensus 260 ~~~~~~Y~~s~yw~~~t~tTvGyGdi~p~-----t~~e~~~~-~~~~i~g~~~~a~~i~~i 314 (821)
.+.+++|..|+||++.++||.||||..|. +..+.++. ++..+.+++++++++|.|
T Consensus 140 ~~~f~~~~~s~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~nlliavi 200 (200)
T PF00520_consen 140 YENFDSFGESLYWLFQTMTGEGWGDVMPSCMSARSWLAVIFFISFIIIVSILLLNLLIAVI 200 (200)
T ss_dssp HHHHSSHHHHHHHHHHHHTTTTCCCCHHHHHHTTSTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccCCccccccccccccchhHhHHhhhhhhhHHHHHHHHHHhcC
Confidence 45577899999999999999999999997 88899988 666777778889998875
No 86
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.55 E-value=1.5e-14 Score=113.16 Aligned_cols=98 Identities=26% Similarity=0.213 Sum_probs=46.5
Q ss_pred HHHHHHcCChHHHHHHHhcCCCCCcc-cccchhhHHHhcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCcHHHHHH
Q 003425 609 LLEAIKYGNDGAASLLVKEGASLNVE-EAGSFLCTAVARGDSDLLKRVLSNGIDPNTRDYDLRTPLHVAASEGLYLMAKL 687 (821)
Q Consensus 609 L~~A~~~~~~~~v~~Ll~~~~~~~~~-~~~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~T~Lh~A~~~g~~~~v~~ 687 (821)
..+++++|..+-|+-.+..|.++|.. .|++|||+|+..|..+++++|+..|++++.+|+.|-|||..|+..||.+||++
T Consensus 6 ~~W~vkNG~~DeVk~~v~~g~nVn~~~ggR~plhyAAD~GQl~ilefli~iGA~i~~kDKygITPLLsAvwEGH~~cVkl 85 (117)
T KOG4214|consen 6 VAWNVKNGEIDEVKQSVNEGLNVNEIYGGRTPLHYAADYGQLSILEFLISIGANIQDKDKYGITPLLSAVWEGHRDCVKL 85 (117)
T ss_pred HhhhhccCcHHHHHHHHHccccHHHHhCCcccchHhhhcchHHHHHHHHHhccccCCccccCCcHHHHHHHHhhHHHHHH
Confidence 34445555555555444444444332 34444444444444444444444444444444444444444444444444444
Q ss_pred HHHcCCCCCCCCCCCCCHH
Q 003425 688 LVEAGASVFPKDRWGNTPL 706 (821)
Q Consensus 688 Ll~~ga~~~~~d~~g~t~l 706 (821)
|+++|||-..+..+|.+.+
T Consensus 86 LL~~GAdrt~~~PdG~~~~ 104 (117)
T KOG4214|consen 86 LLQNGADRTIHAPDGTALI 104 (117)
T ss_pred HHHcCcccceeCCCchhHH
Confidence 4444444444444444433
No 87
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.53 E-value=2.9e-14 Score=111.62 Aligned_cols=101 Identities=29% Similarity=0.419 Sum_probs=92.9
Q ss_pred hhhHHHhcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHH
Q 003425 639 FLCTAVARGDSDLLKRVLSNGIDPNTRDYDLRTPLHVAASEGLYLMAKLLVEAGASVFPKDRWGNTPLDEGRMCGNKNLI 718 (821)
Q Consensus 639 ~l~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~i~ 718 (821)
-..+++++|..+-|+.....|.++|..- .|+||||+|+..|..+++++|+..||+++.+|++|-|||--|+..||.++|
T Consensus 5 ~~~W~vkNG~~DeVk~~v~~g~nVn~~~-ggR~plhyAAD~GQl~ilefli~iGA~i~~kDKygITPLLsAvwEGH~~cV 83 (117)
T KOG4214|consen 5 SVAWNVKNGEIDEVKQSVNEGLNVNEIY-GGRTPLHYAADYGQLSILEFLISIGANIQDKDKYGITPLLSAVWEGHRDCV 83 (117)
T ss_pred hHhhhhccCcHHHHHHHHHccccHHHHh-CCcccchHhhhcchHHHHHHHHHhccccCCccccCCcHHHHHHHHhhHHHH
Confidence 4678899999999999999998888654 799999999999999999999999999999999999999999999999999
Q ss_pred HHHHhccccccccCCCCCCccc
Q 003425 719 KLLEDAKSTQLLEFPHGFQDTA 740 (821)
Q Consensus 719 ~~Ll~~~a~~~~~~~~~~~~~~ 740 (821)
++|++.||+.....++|.+...
T Consensus 84 klLL~~GAdrt~~~PdG~~~~e 105 (117)
T KOG4214|consen 84 KLLLQNGADRTIHAPDGTALIE 105 (117)
T ss_pred HHHHHcCcccceeCCCchhHHh
Confidence 9999999999999998866543
No 88
>cd00038 CAP_ED effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO sensor. In all cases binding of the effector leads to conformational changes and the ability to activate transcription. Cyclic nucleotide-binding domain similar to CAP are also present in cAMP- and cGMP-dependent protein kinases (cAPK and cGPK) and vertebrate cyclic nucleotide-gated ion-channels. Cyclic nucleotide-monophosphate binding domain; proteins that bind cyclic nucleotides (cAMP or cGMP) share a structural domain of about 120 residues; the best studied is the prokaryotic catabolite gene activator, CAP, where such a domain is known to be composed of three alpha-helices and a distinctive eight-stranded, antiparallel beta-barrel structure; three conserved glycine residues are thought to be essential for maintenance of
Probab=99.53 E-value=7.6e-14 Score=124.11 Aligned_cols=114 Identities=32% Similarity=0.550 Sum_probs=108.1
Q ss_pred cccCCCHHHHHHHHHhcccccccccCeEEccCCccCeEEEEEeeEEEEEeeccCCccceEEEeCCCCccccccccccCCc
Q 003425 394 LFKGCSSEFINQIVIRLHEEFFLPGEVIMEKGNVVDQLYFVCLGKLEEVGIEENGTEDYVSYLHPNSSFGEVSILCNIPQ 473 (821)
Q Consensus 394 ~f~~~~~~~l~~l~~~~~~~~~~~~e~I~~~g~~~~~ly~I~~G~v~~~~~~~~g~~~~i~~l~~G~~fGe~~~~~~~~~ 473 (821)
+|..++++.+..+...++...+.+|++|+.+|+..+.+|+|.+|.++++...++|++..+..+.+|++||+..++.+.++
T Consensus 1 ~f~~l~~~~~~~l~~~~~~~~~~~g~~l~~~~~~~~~~~~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~g~~~~~~~~~~ 80 (115)
T cd00038 1 LFSGLDDEELEELADALEERRFPAGEVIIRQGDPADSLYIVLSGSVEVYKLDEDGREQIVGFLGPGDLFGELALLGNGPR 80 (115)
T ss_pred CcccCCHHHHHHHHhhceeeeeCCCCEEEcCCCCCCeEEEEEeCEEEEEEECCCCcEEEEEecCCccCcChHHHhcCCCC
Confidence 47889999999999999999999999999999999999999999999999888899999999999999999998888999
Q ss_pred ceEEEEecceEEEEechHhHHHHHHHhhhchHHH
Q 003425 474 PYTVQVCELCRLLRIDKQSFTNIIDIYFCDGRKV 507 (821)
Q Consensus 474 ~~~~~a~~~~~~~~i~~~~f~~~l~~~p~~~~~~ 507 (821)
..+++|.++|+++.|++++|.+++.++|.+...+
T Consensus 81 ~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 114 (115)
T cd00038 81 SATVRALTDSELLVLPRSDFRRLLQEYPELARRL 114 (115)
T ss_pred CceEEEcCceEEEEEeHHHHHHHHHHCcHhHHhc
Confidence 9999999999999999999999999999887654
No 89
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.52 E-value=2.3e-13 Score=137.86 Aligned_cols=135 Identities=41% Similarity=0.558 Sum_probs=116.4
Q ss_pred CCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCChHHHHHHHhcCCCCCcccccchhhHHH
Q 003425 565 PNRTDYDGRSPLHLAASRGYEEIMTFLIQKGVDINLKDNFGNTPLLEAIKYGNDGAASLLVKEGASLNVEEAGSFLCTAV 644 (821)
Q Consensus 565 ~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~t~l~~A~ 644 (821)
.+..+..+.+++|.|+..+..+++++++..|++++.++..|.||||+|+..++.
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~-------------------------- 119 (235)
T COG0666 66 LAARDLDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNP-------------------------- 119 (235)
T ss_pred cccCCccccCHHHHHHHcCcHHHHHHHHHcCCCcccccCCCCcHHHHHHhcCCc--------------------------
Confidence 345567788999999999999999999999999999999999999999998883
Q ss_pred hcCCHHHHHHHHHCCC---CCCCCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHH
Q 003425 645 ARGDSDLLKRVLSNGI---DPNTRDYDLRTPLHVAASEGLYLMAKLLVEAGASVFPKDRWGNTPLDEGRMCGNKNLIKLL 721 (821)
Q Consensus 645 ~~~~~~~v~~Ll~~g~---~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~i~~~L 721 (821)
..++.++++.|++.|+ +.+.+|..|+||||+|+..|+.+++++|++.|++++.++..|.||++.|+..++.++++.+
T Consensus 120 ~~~~~~~~~~ll~~g~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~l 199 (235)
T COG0666 120 PEGNIEVAKLLLEAGADLDVNNLRDEDGNTPLHWAALNGDADIVELLLEAGADPNSRNSYGVTALDPAAKNGRIELVKLL 199 (235)
T ss_pred ccchHHHHHHHHHcCCCCCCccccCCCCCchhHHHHHcCchHHHHHHHhcCCCCcccccCCCcchhhhcccchHHHHHHH
Confidence 2334455555555555 5566799999999999999999999999999999999999999999999999999999999
Q ss_pred Hhcc
Q 003425 722 EDAK 725 (821)
Q Consensus 722 l~~~ 725 (821)
++.+
T Consensus 200 ~~~~ 203 (235)
T COG0666 200 LDKG 203 (235)
T ss_pred HhcC
Confidence 9987
No 90
>PRK11753 DNA-binding transcriptional dual regulator Crp; Provisional
Probab=99.49 E-value=2.5e-13 Score=135.36 Aligned_cols=118 Identities=16% Similarity=0.265 Sum_probs=110.4
Q ss_pred cCCCHHHHHHHHHhcccccccccCeEEccCCccCeEEEEEeeEEEEEeeccCCccceEEEeCCCCccccccccccC-Ccc
Q 003425 396 KGCSSEFINQIVIRLHEEFFLPGEVIMEKGNVVDQLYFVCLGKLEEVGIEENGTEDYVSYLHPNSSFGEVSILCNI-PQP 474 (821)
Q Consensus 396 ~~~~~~~l~~l~~~~~~~~~~~~e~I~~~g~~~~~ly~I~~G~v~~~~~~~~g~~~~i~~l~~G~~fGe~~~~~~~-~~~ 474 (821)
+.++++.++.++..++.+.|++|++|+.+|++++.+|+|.+|.++++..+.+|++..+..+.+|++||+.+++.+. +++
T Consensus 6 ~~~~~~~~~~l~~~~~~~~~~kg~~l~~~g~~~~~~y~V~~G~v~~~~~~~~g~~~~~~~~~~g~~~g~~~~~~~~~~~~ 85 (211)
T PRK11753 6 KPQTDPTLEWFLSHCHIHKYPAKSTLIHAGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEEGQERS 85 (211)
T ss_pred CCCCHHHHHHHHhhCeEEEeCCCCEEEeCCCCCCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEEeehhhccCCCCce
Confidence 5689999999999999999999999999999999999999999999988889999999999999999999988764 688
Q ss_pred eEEEEecceEEEEechHhHHHHHHHhhhchHHHHHHHhc
Q 003425 475 YTVQVCELCRLLRIDKQSFTNIIDIYFCDGRKVLTNLLQ 513 (821)
Q Consensus 475 ~~~~a~~~~~~~~i~~~~f~~~l~~~p~~~~~~l~~~l~ 513 (821)
++++|.++|.++.|++++|.++++.+|++...+++.+..
T Consensus 86 ~~~~a~~~~~v~~i~~~~~~~l~~~~p~~~~~~~~~~~~ 124 (211)
T PRK11753 86 AWVRAKTACEVAEISYKKFRQLIQVNPDILMALSAQMAR 124 (211)
T ss_pred EEEEEcCcEEEEEEcHHHHHHHHHHCHHHHHHHHHHHHH
Confidence 999999999999999999999999999999888776654
No 91
>PF00027 cNMP_binding: Cyclic nucleotide-binding domain; InterPro: IPR000595 Proteins that bind cyclic nucleotides (cAMP or cGMP) share a structural domain of about 120 residues [, , ]. The best studied of these proteins is the prokaryotic catabolite gene activator (also known as the cAMP receptor protein) (gene crp) where such a domain is known to be composed of three alpha-helices and a distinctive eight-stranded, antiparallel beta-barrel structure. There are six invariant amino acids in this domain, three of which are glycine residues that are thought to be essential for maintenance of the structural integrity of the beta-barrel. cAMP- and cGMP-dependent protein kinases (cAPK and cGPK) contain two tandem copies of the cyclic nucleotide-binding domain. The cAPK's are composed of two different subunits, a catalytic chain and a regulatory chain, which contains both copies of the domain. The cGPK's are single chain enzymes that include the two copies of the domain in their N-terminal section. Vertebrate cyclic nucleotide-gated ion-channels also contain this domain. Two such cations channels have been fully characterised, one is found in rod cells where it plays a role in visual signal transduction.; PDB: 1O7F_A 2BYV_E 3E97_A 3U10_A 2H6B_A 3SHR_A 2OZ6_A 1WGP_A 3LA2_A 3LA3_B ....
Probab=99.47 E-value=1.5e-13 Score=116.45 Aligned_cols=91 Identities=30% Similarity=0.576 Sum_probs=86.7
Q ss_pred cccccccCeEEccCCccCeEEEEEeeEEEEEeeccCCccceEEEeCCCCccccccccccCCcceEEEEecceEEEEechH
Q 003425 412 EEFFLPGEVIMEKGNVVDQLYFVCLGKLEEVGIEENGTEDYVSYLHPNSSFGEVSILCNIPQPYTVQVCELCRLLRIDKQ 491 (821)
Q Consensus 412 ~~~~~~~e~I~~~g~~~~~ly~I~~G~v~~~~~~~~g~~~~i~~l~~G~~fGe~~~~~~~~~~~~~~a~~~~~~~~i~~~ 491 (821)
++.|++|++|+++|+.++.+|||.+|.++++..+.+++..++..+.+|++||+.+++.+.++.++++|.++|+++.|+++
T Consensus 1 ~~~~~~g~~i~~~g~~~~~~~~i~~G~v~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~a~~~~~~~~i~~~ 80 (91)
T PF00027_consen 1 EKTYKKGEVIYRQGDPCDHIYIILSGEVKVSSINEDGKEQIIFFLGPGDIFGEIELLTGKPSPFTVIALTDSEVLRIPRE 80 (91)
T ss_dssp -EEESTTEEEEETTSBESEEEEEEESEEEEEEETTTSEEEEEEEEETTEEESGHHHHHTSBBSSEEEESSSEEEEEEEHH
T ss_pred CeEECCCCEEEeCCCcCCEEEEEEECceEEEeceecceeeeecceeeeccccceeecCCCccEEEEEEccCEEEEEEeHH
Confidence 36799999999999999999999999999999999998888999999999999999999999999999999999999999
Q ss_pred hHHHHHHHhhh
Q 003425 492 SFTNIIDIYFC 502 (821)
Q Consensus 492 ~f~~~l~~~p~ 502 (821)
+|.++++++|+
T Consensus 81 ~~~~~~~~~p~ 91 (91)
T PF00027_consen 81 DFLQLLQQDPE 91 (91)
T ss_dssp HHHHHHHHSHH
T ss_pred HHHHHHHhCcC
Confidence 99999999985
No 92
>PRK10402 DNA-binding transcriptional activator YeiL; Provisional
Probab=99.45 E-value=2.7e-13 Score=136.14 Aligned_cols=112 Identities=18% Similarity=0.225 Sum_probs=105.0
Q ss_pred HHHHHHHhcccccccccCeEEccCCccCeEEEEEeeEEEEEeeccCCccceEEEeCCCCccccccccccCCcceEEEEec
Q 003425 402 FINQIVIRLHEEFFLPGEVIMEKGNVVDQLYFVCLGKLEEVGIEENGTEDYVSYLHPNSSFGEVSILCNIPQPYTVQVCE 481 (821)
Q Consensus 402 ~l~~l~~~~~~~~~~~~e~I~~~g~~~~~ly~I~~G~v~~~~~~~~g~~~~i~~l~~G~~fGe~~~~~~~~~~~~~~a~~ 481 (821)
+..++....+.+.|++|++|+.+|++++.+|+|.+|.|+++..+++|++.++..+.+|++||+.+++.+.+++++++|.+
T Consensus 23 ~~~~i~~~~~~~~~~kge~l~~~G~~~~~~y~V~~G~v~v~~~~~~G~e~~~~~~~~g~~~G~~~~~~~~~~~~~~~A~~ 102 (226)
T PRK10402 23 FSFDVSADTELFHFLAREYIVQEGQQPSYLFYLTRGRAKLYATLANGKVSLIDFFAAPCFIGEIELIDKDHETKAVQAIE 102 (226)
T ss_pred CCHHHHhhhhheeeCCCCEEEcCCCCCceEEEEEeCEEEEEEECCCCCEeeeeecCCCCeEEeehhhcCCCCCccEEEec
Confidence 33468888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEechHhHHHHHHHhhhchHHHHHHHhc
Q 003425 482 LCRLLRIDKQSFTNIIDIYFCDGRKVLTNLLQ 513 (821)
Q Consensus 482 ~~~~~~i~~~~f~~~l~~~p~~~~~~l~~~l~ 513 (821)
+|+++.+++++|.+++..+|.+...++..+..
T Consensus 103 ~~~i~~i~~~~~~~ll~~~p~~~~~~~~~l~~ 134 (226)
T PRK10402 103 ECWCLALPMKDCRPLLLNDALFLRKLCKFLSH 134 (226)
T ss_pred cEEEEEEEHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 99999999999999999999999988877764
No 93
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.45 E-value=5.1e-13 Score=135.27 Aligned_cols=131 Identities=39% Similarity=0.528 Sum_probs=109.5
Q ss_pred cccchhhhHhhhHHHHhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCC-----HHHHHHHHHcCC---CCCCCC
Q 003425 531 HISKHEAELALKVNSAAYHGDLYQLEGLIRAGADPNRTDYDGRSPLHLAASRGY-----EEIMTFLIQKGV---DINLKD 602 (821)
Q Consensus 531 ~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~g~-----~~~v~~Ll~~g~---~~~~~~ 602 (821)
.....+..+.+++|.|+..++.+.++.++..|++++.++..|.||||+|+..++ .++++.|++.|+ +.+.+|
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~ 144 (235)
T COG0666 65 HLAARDLDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRD 144 (235)
T ss_pred ccccCCccccCHHHHHHHcCcHHHHHHHHHcCCCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccC
Confidence 344556668899999999999999999999999999999999999999999999 999999999999 666669
Q ss_pred CCCCcHHHHHHHcCChHHHHHHHhcCCCCCcccccchhhHHHhcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCcH
Q 003425 603 NFGNTPLLEAIKYGNDGAASLLVKEGASLNVEEAGSFLCTAVARGDSDLLKRVLSNGIDPNTRDYDLRTPLHVAASEGLY 682 (821)
Q Consensus 603 ~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~T~Lh~A~~~g~~ 682 (821)
..|.||||+|+..|+.+++++|++.|++ ++..+..|.|+++.|+..++.
T Consensus 145 ~~g~tpl~~A~~~~~~~~~~~ll~~~~~-------------------------------~~~~~~~g~t~l~~a~~~~~~ 193 (235)
T COG0666 145 EDGNTPLHWAALNGDADIVELLLEAGAD-------------------------------PNSRNSYGVTALDPAAKNGRI 193 (235)
T ss_pred CCCCchhHHHHHcCchHHHHHHHhcCCC-------------------------------CcccccCCCcchhhhcccchH
Confidence 9999999999998888888888776554 444566677777777777777
Q ss_pred HHHHHHHHcC
Q 003425 683 LMAKLLVEAG 692 (821)
Q Consensus 683 ~~v~~Ll~~g 692 (821)
++++.+++.+
T Consensus 194 ~~~~~l~~~~ 203 (235)
T COG0666 194 ELVKLLLDKG 203 (235)
T ss_pred HHHHHHHhcC
Confidence 7777776654
No 94
>smart00100 cNMP Cyclic nucleotide-monophosphate binding domain. Catabolite gene activator protein (CAP) is a prokaryotic homologue of eukaryotic cNMP-binding domains, present in ion channels, and cNMP-dependent kinases.
Probab=99.44 E-value=1.2e-12 Score=117.12 Aligned_cols=116 Identities=28% Similarity=0.421 Sum_probs=107.3
Q ss_pred cccCCCHHHHHHHHHhcccccccccCeEEccCCccCeEEEEEeeEEEEEeeccCCccceEEEeCCCCcccccccc--ccC
Q 003425 394 LFKGCSSEFINQIVIRLHEEFFLPGEVIMEKGNVVDQLYFVCLGKLEEVGIEENGTEDYVSYLHPNSSFGEVSIL--CNI 471 (821)
Q Consensus 394 ~f~~~~~~~l~~l~~~~~~~~~~~~e~I~~~g~~~~~ly~I~~G~v~~~~~~~~g~~~~i~~l~~G~~fGe~~~~--~~~ 471 (821)
+|.+++++.+..++..++.+.+++|++|+++|+.++.+|+|.+|.++++..+.+|++..+..+.+|++||+..++ ...
T Consensus 1 ~f~~l~~~~~~~l~~~~~~~~~~~g~~l~~~g~~~~~~y~v~~G~v~~~~~~~~g~~~~~~~~~~g~~~g~~~~~~~~~~ 80 (120)
T smart00100 1 LFKNLDAEELRELADALEPVRYPAGEVIIRQGDVGDSFYIILSGEVRVYKVLEDGREQILGILGPGDFFGELALLTNSRR 80 (120)
T ss_pred CcCCCCHHHHHHHHHhceEEEeCCCCEEEeCCCcCCcEEEEEeeEEEEEEECCCCceEEEEeecCCceechhhhccCCCc
Confidence 478899999999999999999999999999999999999999999999988888999999999999999999988 456
Q ss_pred CcceEEEEecceEEEEechHhHHHHHHHhhhchHHHHH
Q 003425 472 PQPYTVQVCELCRLLRIDKQSFTNIIDIYFCDGRKVLT 509 (821)
Q Consensus 472 ~~~~~~~a~~~~~~~~i~~~~f~~~l~~~p~~~~~~l~ 509 (821)
++..++++.++|.++.++.+++.+.+..++.+...++.
T Consensus 81 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 118 (120)
T smart00100 81 AASATAVALELATLLRIDFRDFLQLLQENPQLLLELLL 118 (120)
T ss_pred ccceEEEEEeeEEEEccCHHHHHHHHHHhHHHHHHHHh
Confidence 78899999999999999999999999999887766554
No 95
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.43 E-value=1.3e-13 Score=103.61 Aligned_cols=55 Identities=40% Similarity=0.500 Sum_probs=33.6
Q ss_pred HHHCC-CCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHH
Q 003425 655 VLSNG-IDPNTRDYDLRTPLHVAASEGLYLMAKLLVEAGASVFPKDRWGNTPLDEG 709 (821)
Q Consensus 655 Ll~~g-~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A 709 (821)
|+++| ++++.+|..|.||||+||..|+.+++++|++.|+|++.+|..|+||+|+|
T Consensus 1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQTPLHYA 56 (56)
T ss_dssp -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence 56777 89999999999999999999999999999999999999999999999997
No 96
>COG0664 Crp cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]
Probab=99.40 E-value=2.1e-12 Score=129.25 Aligned_cols=125 Identities=22% Similarity=0.360 Sum_probs=114.2
Q ss_pred cccccccCCCHHHHHHHHHhcccccccccCeEEccCCccCeEEEEEeeEEEEEeeccCCccceEEEeCCCCccccccccc
Q 003425 390 EKVPLFKGCSSEFINQIVIRLHEEFFLPGEVIMEKGNVVDQLYFVCLGKLEEVGIEENGTEDYVSYLHPNSSFGEVSILC 469 (821)
Q Consensus 390 ~~~~~f~~~~~~~l~~l~~~~~~~~~~~~e~I~~~g~~~~~ly~I~~G~v~~~~~~~~g~~~~i~~l~~G~~fGe~~~~~ 469 (821)
...+.|...+.+....+....+...+++|++|+.+|++++.+|+|.+|.++++...++|++.++..+.+|++||+.+++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~g~~~~~~y~v~~G~v~~~~~~~~G~~~~~~~~~~g~~fg~~~l~~ 82 (214)
T COG0664 3 KENPLLNLLPSELLELLALKLEVRKLPKGEVLFTEGEEADSLYIILSGIVKLYANTEDGREIILGFLGPGDFFGELALLG 82 (214)
T ss_pred ccccccccCCHHHHHHHhhhceeEeeCCCCEEEcCCCcCceEEEEEEeEEEEEEECCCCcEEEEEEecCCchhhhHHHhc
Confidence 34566767788888888888999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcceEEEEecceEEEEechHhHHHHHHHhhhchHHHHHHHhcC
Q 003425 470 NIPQPYTVQVCELCRLLRIDKQSFTNIIDIYFCDGRKVLTNLLQG 514 (821)
Q Consensus 470 ~~~~~~~~~a~~~~~~~~i~~~~f~~~l~~~p~~~~~~l~~~l~~ 514 (821)
+.|++++++|.++|+++.++++.|.+++..+|.+...++..+..+
T Consensus 83 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~~~~~ 127 (214)
T COG0664 83 GDPRSASAVALTDVEVLEIPRKDFLELLAESPKLALALLRLLARR 127 (214)
T ss_pred CCCccceEEEcceEEEEEecHHHHHHHHhhCcHHHHHHHHHHHHH
Confidence 889999999999999999999999998888888888888777654
No 97
>PRK11161 fumarate/nitrate reduction transcriptional regulator; Provisional
Probab=99.40 E-value=2.3e-12 Score=130.64 Aligned_cols=125 Identities=14% Similarity=0.160 Sum_probs=111.2
Q ss_pred ccccccccCCCHHHHHHHHHhccc-ccccccCeEEccCCccCeEEEEEeeEEEEEeeccCCccceEEEeCCCCccccccc
Q 003425 389 IEKVPLFKGCSSEFINQIVIRLHE-EFFLPGEVIMEKGNVVDQLYFVCLGKLEEVGIEENGTEDYVSYLHPNSSFGEVSI 467 (821)
Q Consensus 389 l~~~~~f~~~~~~~l~~l~~~~~~-~~~~~~e~I~~~g~~~~~ly~I~~G~v~~~~~~~~g~~~~i~~l~~G~~fGe~~~ 467 (821)
+.+.+.|..++++.+..|...... ..|++|++|+.+||.++++|+|.+|.++++..+++|++.++.++.+|++||+.++
T Consensus 15 ~~~~~~~~~l~~~~l~~L~~~~~~~~~~~kge~l~~~Gd~~~~ly~v~~G~v~~~~~~~~G~e~i~~~~~~gd~~g~~~~ 94 (235)
T PRK11161 15 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAI 94 (235)
T ss_pred ccccccccCCCHHHHHHHHHhhhhceeecCCCEeECCCCCcceEEEEeeceEEEEEECCCCCEEEEEeccCCceeccccc
Confidence 455556667999999999988864 6899999999999999999999999999999999999999999999999998766
Q ss_pred cccCCcceEEEEecceEEEEechHhHHHHHHHhhhchHHHHHHHhcC
Q 003425 468 LCNIPQPYTVQVCELCRLLRIDKQSFTNIIDIYFCDGRKVLTNLLQG 514 (821)
Q Consensus 468 ~~~~~~~~~~~a~~~~~~~~i~~~~f~~~l~~~p~~~~~~l~~~l~~ 514 (821)
+. .+++.+++|.++|+++.||++.|.+++..+|++...++..+..+
T Consensus 95 ~~-~~~~~~~~a~~~~~i~~ip~~~f~~l~~~~p~~~~~~~~~~~~~ 140 (235)
T PRK11161 95 GS-GQHPSFAQALETSMVCEIPFETLDDLSGKMPKLRQQIMRLMSGE 140 (235)
T ss_pred cC-CCCcceEEEeccEEEEEEEHHHHHHHHHHChHHHHHHHHHHHHH
Confidence 54 45567899999999999999999999999999999988877653
No 98
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.37 E-value=5e-13 Score=100.43 Aligned_cols=55 Identities=47% Similarity=0.662 Sum_probs=33.3
Q ss_pred HHHcC-CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHH
Q 003425 558 LIRAG-ADPNRTDYDGRSPLHLAASRGYEEIMTFLIQKGVDINLKDNFGNTPLLEA 612 (821)
Q Consensus 558 Ll~~g-~~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~tpL~~A 612 (821)
|+++| +++|.+|..|.||||+||..|+.+++++|++.|+|++.+|..|+||||+|
T Consensus 1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQTPLHYA 56 (56)
T ss_dssp -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence 57778 88999999999999999999999999999999999999999999999987
No 99
>KOG1113 consensus cAMP-dependent protein kinase types I and II, regulatory subunit [Signal transduction mechanisms]
Probab=99.37 E-value=1e-12 Score=130.13 Aligned_cols=126 Identities=27% Similarity=0.409 Sum_probs=114.8
Q ss_pred hhhccccccccCCCHHHHHHHHHhcccccccccCeEEccCCccCeEEEEEeeEEEEEeeccCCccceEEEeCCCCccccc
Q 003425 386 LPYIEKVPLFKGCSSEFINQIVIRLHEEFFLPGEVIMEKGNVVDQLYFVCLGKLEEVGIEENGTEDYVSYLHPNSSFGEV 465 (821)
Q Consensus 386 ~~~l~~~~~f~~~~~~~l~~l~~~~~~~~~~~~e~I~~~g~~~~~ly~I~~G~v~~~~~~~~g~~~~i~~l~~G~~fGe~ 465 (821)
.+.+++.-+|.+++++.+.++...|.++.++.|+.|+.+|+.++.+|+|.+|++.+|. + ...+..+.+|.+|||+
T Consensus 121 ~~a~r~~~LF~~Ld~eq~~~v~dam~~~~v~~G~~Vi~qGdeGd~fYvI~kGt~dVyv---~--~~~v~~~~~g~sFGEl 195 (368)
T KOG1113|consen 121 EEAFRKNLLFANLDDEQLSQVLDAMFEKRVKAGETVIKQGDEGDNFYVIDKGTFDVYV---N--GTYVTTYSPGGSFGEL 195 (368)
T ss_pred HHHHHhccccccCCHHHHHHHHHhhceeeecCCcEEEecCCcCCcEEEEecceEEEEE---C--CeEEeeeCCCCchhhh
Confidence 3566777899999999999999999999999999999999999999999999999998 2 3467889999999999
Q ss_pred cccccCCcceEEEEecceEEEEechHhHHHHHHHhhhchHHHHHHHhcCCc
Q 003425 466 SILCNIPQPYTVQVCELCRLLRIDKQSFTNIIDIYFCDGRKVLTNLLQGKE 516 (821)
Q Consensus 466 ~~~~~~~~~~~~~a~~~~~~~~i~~~~f~~~l~~~p~~~~~~l~~~l~~~~ 516 (821)
+++.+.||.+|+.|.+++.+|.+++..|..++-.+..-.++|....+....
T Consensus 196 ALmyn~PRaATv~a~t~~klWgldr~SFrrIi~~s~~kkrkMy~~~l~s~p 246 (368)
T KOG1113|consen 196 ALMYNPPRAATVVAKSLKKLWGLDRTSFRRIIMKSCIKKRKMYEPFLESVP 246 (368)
T ss_pred HhhhCCCcccceeeccccceEEEeeceeEEEeeccchhhhhhhhhhhhcch
Confidence 999999999999999999999999999999998888888888887776544
No 100
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.36 E-value=1.7e-12 Score=133.42 Aligned_cols=115 Identities=27% Similarity=0.343 Sum_probs=95.3
Q ss_pred hHHHHhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCChHHH
Q 003425 542 KVNSAAYHGDLYQLEGLIRAGADPNRTDYDGRSPLHLAASRGYEEIMTFLIQKGVDINLKDNFGNTPLLEAIKYGNDGAA 621 (821)
Q Consensus 542 ~L~~A~~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~tpL~~A~~~~~~~~v 621 (821)
.|..|+..|.+++|+..+..-.|+...+.+|-||||-|+..||.+||++|++.|+|+|..|.+|+||||+|+.+++..++
T Consensus 553 LLLDaaLeGEldlVq~~i~ev~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa~DSdGWTPLHCAASCNnv~~c 632 (752)
T KOG0515|consen 553 LLLDAALEGELDLVQRIIYEVTDPSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNAADSDGWTPLHCAASCNNVPMC 632 (752)
T ss_pred HHHhhhhcchHHHHHHHHHhhcCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccCccCCCCchhhhhhhcCchHHH
Confidence 36679999999999999998889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCc---ccccchhhHH--HhcCCHHHHHHHH
Q 003425 622 SLLVKEGASLNV---EEAGSFLCTA--VARGDSDLLKRVL 656 (821)
Q Consensus 622 ~~Ll~~~~~~~~---~~~~t~l~~A--~~~~~~~~v~~Ll 656 (821)
+.|+++|+.+-. .|+.|+..-+ -..|...|.++|.
T Consensus 633 kqLVe~GaavfAsTlSDmeTa~eKCee~eeGY~~CsqyL~ 672 (752)
T KOG0515|consen 633 KQLVESGAAVFASTLSDMETAAEKCEEMEEGYDQCSQYLY 672 (752)
T ss_pred HHHHhccceEEeeecccccchhhhcchhhhhHHHHHHHHH
Confidence 999999987644 2344443221 1234444555554
No 101
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.36 E-value=1.5e-12 Score=97.38 Aligned_cols=54 Identities=43% Similarity=0.564 Sum_probs=42.2
Q ss_pred CCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH
Q 003425 669 LRTPLHVAASEGLYLMAKLLVEAGASVFPKDRWGNTPLDEGRMCGNKNLIKLLE 722 (821)
Q Consensus 669 g~T~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~i~~~Ll 722 (821)
|.||||+||+.|+.+++++|+++|+|+|.+|.+|.||||+|+..|+.+++++|+
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence 678899999988999999998888888888888899999999999888888885
No 102
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.35 E-value=4.4e-12 Score=146.58 Aligned_cols=103 Identities=33% Similarity=0.478 Sum_probs=92.0
Q ss_pred chhhHHHhcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHH
Q 003425 638 SFLCTAVARGDSDLLKRVLSNGIDPNTRDYDLRTPLHVAASEGLYLMAKLLVEAGASVFPKDRWGNTPLDEGRMCGNKNL 717 (821)
Q Consensus 638 t~l~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~i 717 (821)
..|+.|+..|+.+.++.|+++|+++|.+|..|+||||+||..|+.+++++|+++|+|++.+|..|.||||+|+..|+.++
T Consensus 84 ~~L~~aa~~G~~~~vk~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~i 163 (664)
T PTZ00322 84 VELCQLAASGDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREV 163 (664)
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHH
Confidence 35888999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhc-------cccccccCCCCCCccc
Q 003425 718 IKLLEDA-------KSTQLLEFPHGFQDTA 740 (821)
Q Consensus 718 ~~~Ll~~-------~a~~~~~~~~~~~~~~ 740 (821)
+++|+++ |++.......|..+..
T Consensus 164 v~~Ll~~~~~~~~~ga~~~~~~~~g~~~~~ 193 (664)
T PTZ00322 164 VQLLSRHSQCHFELGANAKPDSFTGKPPSL 193 (664)
T ss_pred HHHHHhCCCcccccCCCCCccccCCCCccc
Confidence 9999998 7777766666654433
No 103
>PF07885 Ion_trans_2: Ion channel; InterPro: IPR013099 This entry includes the two membrane helix type ion channels found in bacteria []. ; PDB: 1KKD_A 2A0L_A 1ORQ_C 3UKM_C 1LNQ_E 3OUS_A 3LDC_A 3LDD_A 3RBZ_A 3LDE_A ....
Probab=99.34 E-value=8.7e-12 Score=101.61 Aligned_cols=55 Identities=33% Similarity=0.617 Sum_probs=49.5
Q ss_pred HHHHHHHHHHHHhhccccCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 003425 265 SYITSMYASVVTMTTVGYGDVHAVNLREMVFIMIYVSFDMILGAYLIGNMTALIV 319 (821)
Q Consensus 265 ~Y~~s~yw~~~t~tTvGyGdi~p~t~~e~~~~~~~~i~g~~~~a~~i~~i~~~~~ 319 (821)
+|.+|+||+++|+|||||||+.|.++.+|+++++.+++|+.++++.++.+++.+.
T Consensus 24 ~~~da~yfs~~t~tTvGyGDi~p~t~~gr~~~~~~~~~G~~~~~~~~~~~~~~l~ 78 (79)
T PF07885_consen 24 SFIDALYFSFVTITTVGYGDIVPQTPAGRIFTIIYMLIGIFLFALFLSVLASVLT 78 (79)
T ss_dssp SHHHHHHHHHHHHTT---SSSSTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcccCCCccCCccchHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 5889999999999999999999999999999999999999999999999988764
No 104
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.32 E-value=8.2e-12 Score=119.11 Aligned_cols=59 Identities=25% Similarity=0.274 Sum_probs=31.6
Q ss_pred hhHHHHhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC
Q 003425 541 LKVNSAAYHGDLYQLEGLIRAGADPNRTDYDGRSPLHLAASRGYEEIMTFLIQKGVDIN 599 (821)
Q Consensus 541 ~~L~~A~~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~ 599 (821)
.+|..|+..|+.+....|++.--++|..|.+|.|+|..|+..|+.+++++|++.|+|+|
T Consensus 14 ~~Lle~i~Kndt~~a~~LLs~vr~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN 72 (396)
T KOG1710|consen 14 SPLLEAIDKNDTEAALALLSTVRQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVN 72 (396)
T ss_pred hHHHHHHccCcHHHHHHHHHHhhhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcC
Confidence 44555555555555555555433455555555555555555555555555555555554
No 105
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.32 E-value=3.4e-12 Score=95.50 Aligned_cols=54 Identities=46% Similarity=0.687 Sum_probs=30.3
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCChHHHHHHH
Q 003425 572 GRSPLHLAASRGYEEIMTFLIQKGVDINLKDNFGNTPLLEAIKYGNDGAASLLV 625 (821)
Q Consensus 572 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll 625 (821)
|+||||+||..|+.+++++|+++|+++|.+|.+|.||||+|+..|+.+++++|+
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence 456666666666666666666666666666666666666666666666666654
No 106
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.31 E-value=8.2e-12 Score=144.31 Aligned_cols=102 Identities=33% Similarity=0.481 Sum_probs=92.3
Q ss_pred hhhHHHHhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCChH
Q 003425 540 ALKVNSAAYHGDLYQLEGLIRAGADPNRTDYDGRSPLHLAASRGYEEIMTFLIQKGVDINLKDNFGNTPLLEAIKYGNDG 619 (821)
Q Consensus 540 ~~~L~~A~~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~tpL~~A~~~~~~~ 619 (821)
...|+.|+..|+.+.++.|++.|+++|.+|..|.||||+||..|+.+++++|+++|++++.+|..|.||||+|+..|+.+
T Consensus 83 ~~~L~~aa~~G~~~~vk~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~ 162 (664)
T PTZ00322 83 TVELCQLAASGDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFRE 162 (664)
T ss_pred HHHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHH
Confidence 35689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhc-------CCCCCcc--cccchhh
Q 003425 620 AASLLVKE-------GASLNVE--EAGSFLC 641 (821)
Q Consensus 620 ~v~~Ll~~-------~~~~~~~--~~~t~l~ 641 (821)
++++|+++ |++.+.. +|.+++.
T Consensus 163 iv~~Ll~~~~~~~~~ga~~~~~~~~g~~~~~ 193 (664)
T PTZ00322 163 VVQLLSRHSQCHFELGANAKPDSFTGKPPSL 193 (664)
T ss_pred HHHHHHhCCCcccccCCCCCccccCCCCccc
Confidence 99999998 6665543 3444433
No 107
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.31 E-value=4.4e-12 Score=130.43 Aligned_cols=95 Identities=31% Similarity=0.405 Sum_probs=87.5
Q ss_pred hhHHHhcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHH
Q 003425 640 LCTAVARGDSDLLKRVLSNGIDPNTRDYDLRTPLHVAASEGLYLMAKLLVEAGASVFPKDRWGNTPLDEGRMCGNKNLIK 719 (821)
Q Consensus 640 l~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~i~~ 719 (821)
|.-|+..|..++|+..+..=-|+...|..|-||||-|+..||+++|++|++.|+|+|..|.+||||||+|+.+++..+++
T Consensus 554 LLDaaLeGEldlVq~~i~ev~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa~DSdGWTPLHCAASCNnv~~ck 633 (752)
T KOG0515|consen 554 LLDAALEGELDLVQRIIYEVTDPSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNAADSDGWTPLHCAASCNNVPMCK 633 (752)
T ss_pred HHhhhhcchHHHHHHHHHhhcCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccCccCCCCchhhhhhhcCchHHHH
Confidence 55688999999999999888888899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhccccccccCCC
Q 003425 720 LLEDAKSTQLLEFPH 734 (821)
Q Consensus 720 ~Ll~~~a~~~~~~~~ 734 (821)
.|++.|+......-.
T Consensus 634 qLVe~GaavfAsTlS 648 (752)
T KOG0515|consen 634 QLVESGAAVFASTLS 648 (752)
T ss_pred HHHhccceEEeeecc
Confidence 999999988765443
No 108
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.31 E-value=1.5e-11 Score=117.42 Aligned_cols=115 Identities=22% Similarity=0.337 Sum_probs=97.3
Q ss_pred HhcCCcchhhhhhhcccccccccchhhhHhhhHHHHhhcCCHHHHHHHHHcCCCCCCC-CCCCCcHHHHHHHcCCHHHHH
Q 003425 511 LLQGKESDLRLKQLQSDITFHISKHEAELALKVNSAAYHGDLYQLEGLIRAGADPNRT-DYDGRSPLHLAASRGYEEIMT 589 (821)
Q Consensus 511 ~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~n~~-d~~g~t~L~~A~~~g~~~~v~ 589 (821)
.+...+......++.. .-+++..|+.|.++|..|+..|+.++++.|++.|+|+|.. +..+.||||.||.+|+.++.+
T Consensus 19 ~i~Kndt~~a~~LLs~--vr~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAALSGn~dvcr 96 (396)
T KOG1710|consen 19 AIDKNDTEAALALLST--VRQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAALSGNQDVCR 96 (396)
T ss_pred HHccCcHHHHHHHHHH--hhhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHHcCCchHHH
Confidence 3333444444444433 2346788999999999999999999999999999999864 678999999999999999999
Q ss_pred HHHHcCCCCCCCCCCCCcHHHHHHHcCChHHHHHHHhc
Q 003425 590 FLIQKGVDINLKDNFGNTPLLEAIKYGNDGAASLLVKE 627 (821)
Q Consensus 590 ~Ll~~g~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ 627 (821)
+|++.|+.+...|.-|+|+-..|+.-|+.++|..+-++
T Consensus 97 llldaGa~~~~vNsvgrTAaqmAAFVG~H~CV~iINN~ 134 (396)
T KOG1710|consen 97 LLLDAGARMYLVNSVGRTAAQMAAFVGHHECVAIINNH 134 (396)
T ss_pred HHHhccCccccccchhhhHHHHHHHhcchHHHHHHhcc
Confidence 99999999999999999999999999999999876543
No 109
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.30 E-value=2.8e-12 Score=132.45 Aligned_cols=123 Identities=22% Similarity=0.373 Sum_probs=112.1
Q ss_pred hhhhhhccccccccCCCHHHHHHHHHhcccccccccCeEEccCCccCeEEEEEeeEEEEEeeccC-CccceEEEeCCCCc
Q 003425 383 TLYLPYIEKVPLFKGCSSEFINQIVIRLHEEFFLPGEVIMEKGNVVDQLYFVCLGKLEEVGIEEN-GTEDYVSYLHPNSS 461 (821)
Q Consensus 383 ~~~~~~l~~~~~f~~~~~~~l~~l~~~~~~~~~~~~e~I~~~g~~~~~ly~I~~G~v~~~~~~~~-g~~~~i~~l~~G~~ 461 (821)
+.+.++|+++|+|+++|++.+..++..++...|..|++|+++|+.++.+|+|.+|.|.+.+.++. +.+..+..+..||+
T Consensus 268 ~~~~~fLrsv~~~q~l~Ee~L~KiaD~le~~~Yd~g~yIirqge~G~~ffii~~G~V~vtq~~e~~~q~~~lr~l~kGd~ 347 (732)
T KOG0614|consen 268 EQYMNFLRSVPLFQNLPEELLLKIADVLEEEYYDAGEYIIRQGEKGDTFFIISKGTVKVTQQDEGSTQPQELRTLNKGDY 347 (732)
T ss_pred HHHHHHHHhhhhhccCCHHHHHHHHHHHHHHhhcCCceEEeecCCCCeEEEEecceEEEeecCCCCCchhHHhhccccch
Confidence 34678899999999999999999999999999999999999999999999999999999987665 66778899999999
Q ss_pred cccccccccCCcceEEEEecc-eEEEEechHhHHHHHHHhhhchH
Q 003425 462 FGEVSILCNIPQPYTVQVCEL-CRLLRIDKQSFTNIIDIYFCDGR 505 (821)
Q Consensus 462 fGe~~~~~~~~~~~~~~a~~~-~~~~~i~~~~f~~~l~~~p~~~~ 505 (821)
|||.+++....|++++.|..+ ++++.|+++.|.+++....++.+
T Consensus 348 FGE~al~~edvRtAniia~~~gv~cl~lDresF~~liG~l~~l~e 392 (732)
T KOG0614|consen 348 FGERALLGEDVRTANIIAQAPGVECLTLDRESFKKLIGDLEELKE 392 (732)
T ss_pred hhHHHhhccCccchhhhccCCCceEEEecHHHHHHhcccHHHhhh
Confidence 999999999999999999988 89999999999998876655543
No 110
>KOG1420 consensus Ca2+-activated K+ channel Slowpoke, alpha subunit [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.30 E-value=1e-12 Score=135.96 Aligned_cols=181 Identities=22% Similarity=0.307 Sum_probs=119.8
Q ss_pred eehhHHHHHHHHHHhHhheeeEEEEeCCceEEeeccHHHHHHHhhhhhHHHHHhhhhHHHHHhhcCchhHHHHHHHHHHH
Q 003425 105 LYVLDIVGQIAFLFDIVLQFCLAYRDSQTYRLICKRTPIALRYLRSSFIIDLFSCMPWDLIYKASGRKEAVRYLLWIRLY 184 (821)
Q Consensus 105 ~~~~~~~~~~~f~~Di~l~f~t~y~~~~~~~~v~~~~~I~~~Ylk~~f~iDlis~lP~~~~~~~~~~~~~~~~l~llrl~ 184 (821)
..-+|+...++|++-+++||..+-. +. +-++.-+-++|++.+-|..+.+....+.-.+|+||.+|+.
T Consensus 164 tqqidlafnifflvyffirfiaasd-----------kl--wf~lemys~vdfftippsfvsiyl~r~wlglrflralrlm 230 (1103)
T KOG1420|consen 164 TQQIDLAFNIFFLVYFFIRFIAASD-----------KL--WFWLEMYSVVDFFTIPPSFVSIYLNRSWLGLRFLRALRLM 230 (1103)
T ss_pred HHHhhhHhhHHHHHHHHHHHhhccc-----------ce--eeeeehhhheeeeecCchheEEEeccchHHHHHHHHHHhc
Confidence 3568999999999999998854421 11 1112223377888777765544444444456666666666
Q ss_pred HHHHHHHHHHhhhhhHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCceeccccCCCCCcccccccchHH
Q 003425 185 RVRKVSQFFHKMEKDIRINYMFSRIVKLIAVELYCSHIAACIFYYLATTLPPEQEGYTWIGSLKMGDYSYADFREIGFWK 264 (821)
Q Consensus 185 rl~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~h~~ac~~~~i~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~ 264 (821)
.+..+.+++..++.. ...++..++.+++-...-.|.+..+++.. +..|-.-.+ .-.-
T Consensus 231 tvpdilqylnilkts-----ssirl~qlvsifisvwltaag~ihllens------gdp~~~f~n------------~hrl 287 (1103)
T KOG1420|consen 231 TVPDILQYLNILKTS-----SSIRLVQLVSIFISVWLTAAGFIHLLENS------GDPWENFQN------------NHRL 287 (1103)
T ss_pred cHHHHHHHHHHHhcc-----chhhHHHHHHHHHHHHHhhcceeehhhcC------CChhHhccC------------cccc
Confidence 666666666554321 22245555554444444444444444432 223321110 1123
Q ss_pred HHHHHHHHHHHHhhccccCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 003425 265 SYITSMYASVVTMTTVGYGDVHAVNLREMVFIMIYVSFDMILGAYLIGNMTALIVKG 321 (821)
Q Consensus 265 ~Y~~s~yw~~~t~tTvGyGdi~p~t~~e~~~~~~~~i~g~~~~a~~i~~i~~~~~~~ 321 (821)
.|..|.|+.++||+||||||+.-.|..+++|.+++++.|..+||--+..|..++.+.
T Consensus 288 tyw~cvyfl~vtmstvgygdvyc~t~lgrlfmvffil~glamfasyvpeiielignr 344 (1103)
T KOG1420|consen 288 TYWECVYFLMVTMSTVGYGDVYCKTTLGRLFMVFFILGGLAMFASYVPEIIELIGNR 344 (1103)
T ss_pred hhhheeeeeEEEeeeccccceeehhhhhHHHHHHHHHHHHHHHHhhhHHHHHHHccc
Confidence 699999999999999999999999999999999999999999999999999998763
No 111
>COG2905 Predicted signal-transduction protein containing cAMP-binding and CBS domains [Signal transduction mechanisms]
Probab=99.28 E-value=6e-11 Score=124.91 Aligned_cols=125 Identities=19% Similarity=0.277 Sum_probs=114.4
Q ss_pred hhhccccccccCCCHHHHHHHHHhcccccccccCeEEccCCccCeEEEEEeeEEEEEeeccCCccceEEEeCCCCccccc
Q 003425 386 LPYIEKVPLFKGCSSEFINQIVIRLHEEFFLPGEVIMEKGNVVDQLYFVCLGKLEEVGIEENGTEDYVSYLHPNSSFGEV 465 (821)
Q Consensus 386 ~~~l~~~~~f~~~~~~~l~~l~~~~~~~~~~~~e~I~~~g~~~~~ly~I~~G~v~~~~~~~~g~~~~i~~l~~G~~fGe~ 465 (821)
.+++.++|.|..++++.+.+|...+....|.+||+|+..|.+..++|+|.+|.|+++. ++|. ++..+..||.||-.
T Consensus 6 ~~Fl~~~pPF~~L~~eel~~L~~~l~v~yy~kge~ii~~~~p~~~l~vi~kG~vev~~--~~g~--v~~~~~~gdlFg~~ 81 (610)
T COG2905 6 DQFLQQHPPFSQLPAEELEQLMGALEVKYYRKGEIIIYAGSPVHYLYVIRKGVVEVRS--DGGE--VLDRLAAGDLFGFS 81 (610)
T ss_pred HHHHhcCCCcccCCHHHHHHHHhhhccccccCCCeeecCCCCcceeEEEEeceeeEEc--CCCe--eeeeeccCccccch
Confidence 4688999999999999999999999999999999999999999999999999999886 2333 78999999999999
Q ss_pred cccccCCcceEEEEecceEEEEechHhHHHHHHHhhhchHHHHHHHhcC
Q 003425 466 SILCNIPQPYTVQVCELCRLLRIDKQSFTNIIDIYFCDGRKVLTNLLQG 514 (821)
Q Consensus 466 ~~~~~~~~~~~~~a~~~~~~~~i~~~~f~~~l~~~p~~~~~~l~~~l~~ 514 (821)
++++..+....+.|.+++.+|.||++.|.++++++|+++..+......+
T Consensus 82 ~l~~~~~~~~~~~aeedsl~y~lp~s~F~ql~~~n~~f~~ff~~~~akR 130 (610)
T COG2905 82 SLFTELNKQRYMAAEEDSLCYLLPKSVFMQLMEENPEFADFFLRSLAKR 130 (610)
T ss_pred hhcccCCCcceeEeeccceEEecCHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 9999888888899999999999999999999999999999988665553
No 112
>TIGR03697 NtcA_cyano global nitrogen regulator NtcA, cyanobacterial. Members of this protein family, found in the cyanobacteria, are the global nitrogen regulator NtcA. This DNA-binding transcriptional regulator is required for expressing many different ammonia-repressible genes. The consensus NtcA-binding site is G T A N(8)T A C.
Probab=99.26 E-value=2.9e-11 Score=118.63 Aligned_cols=96 Identities=23% Similarity=0.294 Sum_probs=89.7
Q ss_pred cCeEEccCCccCeEEEEEeeEEEEEeeccCCccceEEEeCCCCccccccccccCCc--ceEEEEecceEEEEechHhHHH
Q 003425 418 GEVIMEKGNVVDQLYFVCLGKLEEVGIEENGTEDYVSYLHPNSSFGEVSILCNIPQ--PYTVQVCELCRLLRIDKQSFTN 495 (821)
Q Consensus 418 ~e~I~~~g~~~~~ly~I~~G~v~~~~~~~~g~~~~i~~l~~G~~fGe~~~~~~~~~--~~~~~a~~~~~~~~i~~~~f~~ 495 (821)
|+.|+.+|++.+.+|+|.+|.|+++...++|++.++.++.+|++||+.+++.+.+. .++++|.++|+++.+|+++|.+
T Consensus 1 g~~l~~~g~~~~~~~~i~~G~v~~~~~~~~G~e~~l~~~~~g~~~G~~~~~~~~~~~~~~~~~A~~~~~v~~i~~~~~~~ 80 (193)
T TIGR03697 1 GKTIFFPGDPAEKVYFLRRGAVKLSRVYESGEEITVALLRENSVFGVLSLITGHRSDRFYHAVAFTRVELLAVPIEQVEK 80 (193)
T ss_pred CCceecCCCCCCcEEEEEecEEEEEEeCCCCcEeeeEEccCCCEeeeeeeccCCCCccceEEEEecceEEEEeeHHHHHH
Confidence 68999999999999999999999999999999999999999999999999987754 5789999999999999999999
Q ss_pred HHHHhhhchHHHHHHHhc
Q 003425 496 IIDIYFCDGRKVLTNLLQ 513 (821)
Q Consensus 496 ~l~~~p~~~~~~l~~~l~ 513 (821)
++..+|.+...+++.+..
T Consensus 81 l~~~~p~l~~~~~~~l~~ 98 (193)
T TIGR03697 81 AIEEDPDLSMLLLQGLSS 98 (193)
T ss_pred HHHHChHHHHHHHHHHHH
Confidence 999999999999987765
No 113
>PLN02868 acyl-CoA thioesterase family protein
Probab=99.24 E-value=3.7e-11 Score=131.51 Aligned_cols=113 Identities=19% Similarity=0.232 Sum_probs=104.0
Q ss_pred hhhccccccccCCCHHHHHHHHHhcccccccccCeEEccCCccCeEEEEEeeEEEEEeeccCCccceEEEeCCCCccccc
Q 003425 386 LPYIEKVPLFKGCSSEFINQIVIRLHEEFFLPGEVIMEKGNVVDQLYFVCLGKLEEVGIEENGTEDYVSYLHPNSSFGEV 465 (821)
Q Consensus 386 ~~~l~~~~~f~~~~~~~l~~l~~~~~~~~~~~~e~I~~~g~~~~~ly~I~~G~v~~~~~~~~g~~~~i~~l~~G~~fGe~ 465 (821)
.++++++++|++++++.+..++..++.+.|++|++|+++|+..+.+|+|.+|.|+++..+.+| +.++..+++|++||+.
T Consensus 7 ~~~L~~~~~F~~L~~~~l~~l~~~~~~~~~~~Ge~I~~~Gd~~~~lyiI~~G~V~v~~~~~~g-e~~l~~l~~Gd~fG~~ 85 (413)
T PLN02868 7 VEFLGSVPLLQRLPSSSLKKIAEVVVPKRYGKGEYVVREGEPGDGLYFIWKGEAEVSGPAEEE-SRPEFLLKRYDYFGYG 85 (413)
T ss_pred HHHHhcCcccccCCHHHHHHHHHhceEEEECCCCEEEeCCCcCceEEEEEeCEEEEEEECCCC-cEEEEEeCCCCEeehh
Confidence 356788999999999999999999999999999999999999999999999999999888777 6788899999999975
Q ss_pred cccccCCcceEEEEecceEEEEechHhHHHHHHHhh
Q 003425 466 SILCNIPQPYTVQVCELCRLLRIDKQSFTNIIDIYF 501 (821)
Q Consensus 466 ~~~~~~~~~~~~~a~~~~~~~~i~~~~f~~~l~~~p 501 (821)
+.+.+++++++|.++|+++.|+++.|..+...++
T Consensus 86 --l~~~~~~~~~~A~~d~~v~~ip~~~~~~~~~~~~ 119 (413)
T PLN02868 86 --LSGSVHSADVVAVSELTCLVLPHEHCHLLSPKSI 119 (413)
T ss_pred --hCCCCcccEEEECCCEEEEEEcHHHHhhhccccc
Confidence 6888999999999999999999999988876655
No 114
>PRK09391 fixK transcriptional regulator FixK; Provisional
Probab=99.21 E-value=6.1e-11 Score=119.22 Aligned_cols=105 Identities=17% Similarity=0.187 Sum_probs=96.1
Q ss_pred HHHhcccccccccCeEEccCCccCeEEEEEeeEEEEEeeccCCccceEEEeCCCCccccccccccCCcceEEEEecceEE
Q 003425 406 IVIRLHEEFFLPGEVIMEKGNVVDQLYFVCLGKLEEVGIEENGTEDYVSYLHPNSSFGEVSILCNIPQPYTVQVCELCRL 485 (821)
Q Consensus 406 l~~~~~~~~~~~~e~I~~~g~~~~~ly~I~~G~v~~~~~~~~g~~~~i~~l~~G~~fGe~~~~~~~~~~~~~~a~~~~~~ 485 (821)
+....+...|++|++|+.+||.++++|||.+|.|+++..+++|++.++.++.+|++||+. .+.+++++++|.++|++
T Consensus 34 ~~~~~~~~~~~kge~l~~~Gd~~~~ly~I~~G~vkl~~~~~~G~e~i~~~~~~Gd~fG~~---~~~~~~~~~~A~~ds~v 110 (230)
T PRK09391 34 AGLVASEFSYKKGEEIYGEGEPADYVYQVESGAVRTYRLLSDGRRQIGAFHLPGDVFGLE---SGSTHRFTAEAIVDTTV 110 (230)
T ss_pred ccceeeeEEECCCCEEECCCCCCCeEEEEEeCEEEEEEECCCCcEEEEEEecCCceeccc---CCCcCCeEEEEcCceEE
Confidence 345567889999999999999999999999999999999999999999999999999964 46778899999999999
Q ss_pred EEechHhHHHHHHHhhhchHHHHHHHhc
Q 003425 486 LRIDKQSFTNIIDIYFCDGRKVLTNLLQ 513 (821)
Q Consensus 486 ~~i~~~~f~~~l~~~p~~~~~~l~~~l~ 513 (821)
+.|+.++|.+++..+|++...++..+..
T Consensus 111 ~~i~~~~f~~l~~~~p~l~~~l~~~l~~ 138 (230)
T PRK09391 111 RLIKRRSLEQAAATDVDVARALLSLTAG 138 (230)
T ss_pred EEEEHHHHHHHHhhChHHHHHHHHHHHH
Confidence 9999999999999999999998887765
No 115
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=99.16 E-value=2.4e-11 Score=124.10 Aligned_cols=159 Identities=27% Similarity=0.342 Sum_probs=125.2
Q ss_pred hhhHHHhcCCHHHHHHHHHCCCCCCCCCC-CCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHH
Q 003425 639 FLCTAVARGDSDLLKRVLSNGIDPNTRDY-DLRTPLHVAASEGLYLMAKLLVEAGASVFPKDRWGNTPLDEGRMCGNKNL 717 (821)
Q Consensus 639 ~l~~A~~~~~~~~v~~Ll~~g~~~~~~d~-~g~T~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~i 717 (821)
.||..++.|+.+..-.|+..|+++|..+. .|.||||.|++.|+..-+++|+-+|||++..|.+|.||+.+|...||-++
T Consensus 136 QLhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d~~GmtP~~~AR~~gH~~l 215 (669)
T KOG0818|consen 136 QLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGAQDSSGMTPVDYARQGGHHEL 215 (669)
T ss_pred HHHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCCCCCCCCcHHHHHHhcCchHH
Confidence 58999999999999999999999998874 69999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhccccccccCC---CCCCccccccCCCCcccccCCCCCCccccccCceEEEcCc-----cHHHHHHHHHhHcCCC
Q 003425 718 IKLLEDAKSTQLLEFP---HGFQDTADKRNPTRKCTVFPFHPWDAKESRRHGIVLWIPQ-----NIKDLIKTAAEQLDFR 789 (821)
Q Consensus 718 ~~~Ll~~~a~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~-----~~~~l~~~~~~~~~~~ 789 (821)
.+-|++..-+..-+.. -|..+- ...|.-..+|+ .+.|+.+.+..++...
T Consensus 216 aeRl~e~~y~vtDR~~f~lcgrKpD-----------------------HkngqhfiIP~~~~sld~se~~k~ar~klq~l 272 (669)
T KOG0818|consen 216 AERLVEIQYELTDRLAFYLCGRKPD-----------------------HKNGQHFIIPQMADSLDLSELAKAAKKKLQSL 272 (669)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCc-----------------------ccCCcceeccccccchhHHHHHHHHHHHHhhc
Confidence 9999886543321100 011100 01111122222 3677888888888774
Q ss_pred CCcccccCCCceeeeeeeeecCCeEEEeecCC
Q 003425 790 GGDCILSSEGGKILDVDMINDDQKLYLIQETH 821 (821)
Q Consensus 790 ~~~~~~~~~g~~~~~~~~~r~~~~~~~~~~~~ 821 (821)
+ ..++.+-..++.|..+.|++|.+|.++++|
T Consensus 273 ~-n~~FeeL~mD~yDEvdRRE~eavW~~tqnh 303 (669)
T KOG0818|consen 273 S-NHLFEELAMDVYDEVDRRETDAVWLATQNH 303 (669)
T ss_pred c-hhhHHHHHHHHHHHHhhhhhhhHHhhhccc
Confidence 4 677777777888888999999999999877
No 116
>PRK13918 CRP/FNR family transcriptional regulator; Provisional
Probab=99.13 E-value=2.1e-10 Score=113.32 Aligned_cols=98 Identities=20% Similarity=0.318 Sum_probs=85.6
Q ss_pred hcccccccccCeEEccCC--ccCeEEEEEeeEEEEEeeccCCccceEEEeCCCCccccccccccCCcceEEEEecceEEE
Q 003425 409 RLHEEFFLPGEVIMEKGN--VVDQLYFVCLGKLEEVGIEENGTEDYVSYLHPNSSFGEVSILCNIPQPYTVQVCELCRLL 486 (821)
Q Consensus 409 ~~~~~~~~~~e~I~~~g~--~~~~ly~I~~G~v~~~~~~~~g~~~~i~~l~~G~~fGe~~~~~~~~~~~~~~a~~~~~~~ 486 (821)
.++...|++|++|+.+|| .++.+|+|.+|.|+++..+++|++.++..+.+|++||+.+++ +.+++++++|.++|+++
T Consensus 5 ~~~~~~~~kg~~l~~~Gd~~~~~~~y~I~~G~vr~~~~~~~G~e~~l~~~~~Gd~~G~~~~~-~~~~~~~~~A~~~~~v~ 83 (202)
T PRK13918 5 VVDTVTYRPGAVILYPGVPGPSDMLYRVRSGLVRLHTVDDEGNALTLRYVRPGEYFGEEALA-GAERAYFAEAVTDSRID 83 (202)
T ss_pred ccceeEecCCCEEEcCCCCCCCCeEEEEEeeEEEEEEECCCCCEEEEEEecCCCeechHHhc-CCCCCceEEEcCceEEE
Confidence 356789999999999999 779999999999999999999999999999999999997654 57889999999999999
Q ss_pred EechHhHHHHHHHhhhchHHHHHHHhc
Q 003425 487 RIDKQSFTNIIDIYFCDGRKVLTNLLQ 513 (821)
Q Consensus 487 ~i~~~~f~~~l~~~p~~~~~~l~~~l~ 513 (821)
.|+++.| +|.+...++..+..
T Consensus 84 ~i~~~~~------~~~~~~~l~~~l~~ 104 (202)
T PRK13918 84 VLNPALM------SAEDNLVLTQHLVR 104 (202)
T ss_pred EEEHHHc------ChhhHHHHHHHHHH
Confidence 9999987 46666666665553
No 117
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.13 E-value=4.9e-11 Score=123.44 Aligned_cols=114 Identities=23% Similarity=0.301 Sum_probs=104.6
Q ss_pred hhhhhhccccccccCCCHHHHHHHHHhcccccccccCeEEccCCccCeEEEEEeeEEEEEeeccCCccceEEEeCCCCcc
Q 003425 383 TLYLPYIEKVPLFKGCSSEFINQIVIRLHEEFFLPGEVIMEKGNVVDQLYFVCLGKLEEVGIEENGTEDYVSYLHPNSSF 462 (821)
Q Consensus 383 ~~~~~~l~~~~~f~~~~~~~l~~l~~~~~~~~~~~~e~I~~~g~~~~~ly~I~~G~v~~~~~~~~g~~~~i~~l~~G~~f 462 (821)
++..+.+.+..+++++..+.+.+++..|-+..|.+|..|+++||++..+|.+..|++++.+ + ...++.+++|..|
T Consensus 150 ~lI~dAi~~NdFLknLd~~Qi~e~v~~Myp~~~~~gs~IIrege~Gs~~yV~aeG~~~V~~---~--g~ll~~m~~gtvF 224 (732)
T KOG0614|consen 150 QLIRDAIQKNDFLKNLDASQIKELVDCMYPVEYRAGSWIIREGEPGSHLYVSAEGELQVSR---E--GKLLGKMGAGTVF 224 (732)
T ss_pred HHHHHHHHhhHHHHhhhHHHHHHHHHhhCcccccCCcEEEecCCCCceEEEeecceEEEee---C--CeeeeccCCchhh
Confidence 4455677788899999999999999999999999999999999999999999999999987 3 3468999999999
Q ss_pred ccccccccCCcceEEEEecceEEEEechHhHHHHHHHhh
Q 003425 463 GEVSILCNIPQPYTVQVCELCRLLRIDKQSFTNIIDIYF 501 (821)
Q Consensus 463 Ge~~~~~~~~~~~~~~a~~~~~~~~i~~~~f~~~l~~~p 501 (821)
||++++.+.+|+++++|+++|.++.|+|+.|+.++...-
T Consensus 225 GELAILynctRtAsV~alt~~~lWaidR~vFq~IM~~tg 263 (732)
T KOG0614|consen 225 GELAILYNCTRTASVRALTDVRLWAIDREVFQAIMMRTG 263 (732)
T ss_pred hHHHHHhCCcchhhhhhhhhhhHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999987543
No 118
>KOG1113 consensus cAMP-dependent protein kinase types I and II, regulatory subunit [Signal transduction mechanisms]
Probab=99.01 E-value=3.8e-10 Score=112.10 Aligned_cols=118 Identities=21% Similarity=0.378 Sum_probs=107.7
Q ss_pred HhhhhhhccccccccCCCHHHHHHHHHhcccccccccCeEEccCCccCeEEEEEeeEEEEEeeccCCccceEEEeCCCCc
Q 003425 382 QTLYLPYIEKVPLFKGCSSEFINQIVIRLHEEFFLPGEVIMEKGNVVDQLYFVCLGKLEEVGIEENGTEDYVSYLHPNSS 461 (821)
Q Consensus 382 ~~~~~~~l~~~~~f~~~~~~~l~~l~~~~~~~~~~~~e~I~~~g~~~~~ly~I~~G~v~~~~~~~~g~~~~i~~l~~G~~ 461 (821)
..++.++|+++|++..+.......++..+.++.|++|+.|+.+|++++.+|+|.+|+|.+.... +| ..+ .++.|++
T Consensus 235 rkMy~~~l~s~pil~~l~k~er~kv~dal~~k~y~~G~~Vi~qg~~ge~f~~i~eGEvdv~~~~-~~--v~v-kl~~~dy 310 (368)
T KOG1113|consen 235 RKMYEPFLESVPILESLEKLERAKVADALGTKSYKDGERVIVQGDQGEHFYIIEEGEVDVLKKR-DG--VEV-KLKKGDY 310 (368)
T ss_pred hhhhhhhhhcchhhHHHHHHHHHhhhcccceeeccCCceEEeccCCcceEEEecccccchhhcc-CC--eEE-Eechhhh
Confidence 3567889999999999999999999999999999999999999999999999999999988754 33 445 8999999
Q ss_pred cccccccccCCcceEEEEecceEEEEechHhHHHHHHHhhhc
Q 003425 462 FGEVSILCNIPQPYTVQVCELCRLLRIDKQSFTNIIDIYFCD 503 (821)
Q Consensus 462 fGe~~~~~~~~~~~~~~a~~~~~~~~i~~~~f~~~l~~~p~~ 503 (821)
|||.+++.+.||.++|.|.+...|..+++..|+.++....+.
T Consensus 311 fge~al~~~~pr~Atv~a~~~~kc~~~dk~~ferllgpc~di 352 (368)
T KOG1113|consen 311 FGELALLKNLPRAATVVAKGRLKCAKLDKPRFERLLGPCQDI 352 (368)
T ss_pred cchHHHHhhchhhceeeccCCceeeeeChHHHHHHhhHHHHH
Confidence 999999999999999999999999999999999999876543
No 119
>PRK10537 voltage-gated potassium channel; Provisional
Probab=98.92 E-value=3.2e-08 Score=105.81 Aligned_cols=54 Identities=31% Similarity=0.461 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHHhhccccCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003425 265 SYITSMYASVVTMTTVGYGDVHAVNLREMVFIMIYVSFDMILGAYLIGNMTALI 318 (821)
Q Consensus 265 ~Y~~s~yw~~~t~tTvGyGdi~p~t~~e~~~~~~~~i~g~~~~a~~i~~i~~~~ 318 (821)
.+.+|+||+++|+|||||||+.|.+..+++++++++++|+.++++.++.+..-+
T Consensus 168 s~~dA~y~svvt~tTvGyGdi~p~t~~grl~~i~~ii~Gi~vf~~~is~i~~p~ 221 (393)
T PRK10537 168 SLSTAFYFSIVTMSTVGYGDIVPVSESARLFTISVIILGITVFATSISAIFGPV 221 (393)
T ss_pred CHHHHHHhhheeeecccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 578999999999999999999999999999999999999999999999886643
No 120
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=98.79 E-value=9.1e-09 Score=105.22 Aligned_cols=96 Identities=34% Similarity=0.527 Sum_probs=89.9
Q ss_pred cchhhhHhhhHHHHhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCcHHHH
Q 003425 533 SKHEAELALKVNSAAYHGDLYQLEGLIRAGADPNRTDYDGRSPLHLAASRGYEEIMTFLIQK-GVDINLKDNFGNTPLLE 611 (821)
Q Consensus 533 ~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~tpL~~ 611 (821)
...+.++..++.+|++.|++..++.+.-.|.|++..|.+.+|+||.||..|+.+++++|++. +.+++.+|..|+|||.-
T Consensus 500 ~~~~~~~~i~~~~aa~~GD~~alrRf~l~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDd 579 (622)
T KOG0506|consen 500 GPRENDTVINVMYAAKNGDLSALRRFALQGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDD 579 (622)
T ss_pred CcccccchhhhhhhhhcCCHHHHHHHHHhcccccccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchH
Confidence 35567788899999999999999999999999999999999999999999999999999996 89999999999999999
Q ss_pred HHHcCChHHHHHHHhcC
Q 003425 612 AIKYGNDGAASLLVKEG 628 (821)
Q Consensus 612 A~~~~~~~~v~~Ll~~~ 628 (821)
|...+|.+++++|-+.-
T Consensus 580 A~~F~h~~v~k~L~~~~ 596 (622)
T KOG0506|consen 580 AKHFKHKEVVKLLEEAQ 596 (622)
T ss_pred hHhcCcHHHHHHHHHHh
Confidence 99999999999998753
No 121
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.78 E-value=2.5e-08 Score=102.45 Aligned_cols=87 Identities=30% Similarity=0.334 Sum_probs=81.5
Q ss_pred hhhHHHHhhcCCHHHHHHHHHcCCCCCCCC-CCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCh
Q 003425 540 ALKVNSAAYHGDLYQLEGLIRAGADPNRTD-YDGRSPLHLAASRGYEEIMTFLIQKGVDINLKDNFGNTPLLEAIKYGND 618 (821)
Q Consensus 540 ~~~L~~A~~~g~~~~v~~Ll~~g~~~n~~d-~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~tpL~~A~~~~~~ 618 (821)
.--||..++.|+++..-.|+..|+++|..+ ..|.||||.|++.|+..-+++|+-+|+|++..|..|.||+.+|-..||.
T Consensus 134 srQLhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d~~GmtP~~~AR~~gH~ 213 (669)
T KOG0818|consen 134 SKQLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGAQDSSGMTPVDYARQGGHH 213 (669)
T ss_pred HHHHHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCCCCCCCCcHHHHHHhcCch
Confidence 345999999999999999999999999876 5699999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHh
Q 003425 619 GAASLLVK 626 (821)
Q Consensus 619 ~~v~~Ll~ 626 (821)
++.+-|++
T Consensus 214 ~laeRl~e 221 (669)
T KOG0818|consen 214 ELAERLVE 221 (669)
T ss_pred HHHHHHHH
Confidence 99888876
No 122
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=98.77 E-value=7.7e-09 Score=105.73 Aligned_cols=90 Identities=43% Similarity=0.646 Sum_probs=85.3
Q ss_pred cchhhHHHhcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHcCCH
Q 003425 637 GSFLCTAVARGDSDLLKRVLSNGIDPNTRDYDLRTPLHVAASEGLYLMAKLLVEA-GASVFPKDRWGNTPLDEGRMCGNK 715 (821)
Q Consensus 637 ~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~-ga~~~~~d~~g~t~l~~A~~~~~~ 715 (821)
..++++|+..|+...++.+.-.|.|++.+|.+.+|+||.||..|+++++++|++. +.|++.+|..|+|||+-|...+|.
T Consensus 507 ~i~~~~aa~~GD~~alrRf~l~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~~F~h~ 586 (622)
T KOG0506|consen 507 VINVMYAAKNGDLSALRRFALQGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAKHFKHK 586 (622)
T ss_pred hhhhhhhhhcCCHHHHHHHHHhcccccccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhHhcCcH
Confidence 3569999999999999999999999999999999999999999999999999995 899999999999999999999999
Q ss_pred HHHHHHHhccc
Q 003425 716 NLIKLLEDAKS 726 (821)
Q Consensus 716 ~i~~~Ll~~~a 726 (821)
+++++|.++..
T Consensus 587 ~v~k~L~~~~~ 597 (622)
T KOG0506|consen 587 EVVKLLEEAQY 597 (622)
T ss_pred HHHHHHHHHhc
Confidence 99999998754
No 123
>PF13606 Ank_3: Ankyrin repeat
Probab=98.70 E-value=2e-08 Score=63.83 Aligned_cols=30 Identities=47% Similarity=0.584 Sum_probs=24.3
Q ss_pred CCCcHHHHHHHcCcHHHHHHHHHcCCCCCC
Q 003425 668 DLRTPLHVAASEGLYLMAKLLVEAGASVFP 697 (821)
Q Consensus 668 ~g~T~Lh~A~~~g~~~~v~~Ll~~ga~~~~ 697 (821)
+|+||||+||+.|+.+++++|+++|+|+|.
T Consensus 1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn~ 30 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIEIVKYLLEHGADVNA 30 (30)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcCCCCCC
Confidence 478888888888888888888888888763
No 124
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.68 E-value=9.2e-08 Score=100.33 Aligned_cols=90 Identities=31% Similarity=0.365 Sum_probs=80.5
Q ss_pred hhHHHhcCCHHHHHHHHHCCCCC----CCCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCH
Q 003425 640 LCTAVARGDSDLLKRVLSNGIDP----NTRDYDLRTPLHVAASEGLYLMAKLLVEAGASVFPKDRWGNTPLDEGRMCGNK 715 (821)
Q Consensus 640 l~~A~~~~~~~~v~~Ll~~g~~~----~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~ 715 (821)
|..|+...+...+-+||.||... ...+.+|+||||+||+.|++.+.++|+-+|+|+-.+|.+|+|||.||...|..
T Consensus 628 Ll~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~rda~g~t~l~yar~a~sq 707 (749)
T KOG0705|consen 628 LLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMARDAHGRTALFYARQAGSQ 707 (749)
T ss_pred HHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCccceecccCCchhhhhHhhcccH
Confidence 66688888888899999998543 24466789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcccccc
Q 003425 716 NLIKLLEDAKSTQL 729 (821)
Q Consensus 716 ~i~~~Ll~~~a~~~ 729 (821)
+++..|+++|....
T Consensus 708 ec~d~llq~gcp~e 721 (749)
T KOG0705|consen 708 ECIDVLLQYGCPDE 721 (749)
T ss_pred HHHHHHHHcCCCcc
Confidence 99999999997654
No 125
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=98.62 E-value=8.1e-08 Score=100.09 Aligned_cols=91 Identities=31% Similarity=0.435 Sum_probs=76.3
Q ss_pred cccchhhHHHhcCCHHHHHHHHHCCCC--CCCCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc
Q 003425 635 EAGSFLCTAVARGDSDLLKRVLSNGID--PNTRDYDLRTPLHVAASEGLYLMAKLLVEAGASVFPKDRWGNTPLDEGRMC 712 (821)
Q Consensus 635 ~~~t~l~~A~~~~~~~~v~~Ll~~g~~--~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~ 712 (821)
+..+.||+|+..|+-++|++++++|.. ++..|..|.|+||.|+..++..++++|++.||.+-..|..|.||-.-|-+.
T Consensus 898 ~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~r~vc~~lvdagasl~ktd~kg~tp~eraqqa 977 (1004)
T KOG0782|consen 898 DHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRNRAVCQLLVDAGASLRKTDSKGKTPQERAQQA 977 (1004)
T ss_pred chhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcchHHHHHHHhcchhheecccCCCChHHHHHhc
Confidence 345666666666666666666666643 356678899999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhcc
Q 003425 713 GNKNLIKLLEDAK 725 (821)
Q Consensus 713 ~~~~i~~~Ll~~~ 725 (821)
|..++..+|....
T Consensus 978 ~d~dlaayle~rq 990 (1004)
T KOG0782|consen 978 GDPDLAAYLESRQ 990 (1004)
T ss_pred CCchHHHHHhhhh
Confidence 9999999997654
No 126
>PF13606 Ank_3: Ankyrin repeat
Probab=98.62 E-value=4.6e-08 Score=62.18 Aligned_cols=29 Identities=52% Similarity=0.962 Sum_probs=20.3
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCC
Q 003425 571 DGRSPLHLAASRGYEEIMTFLIQKGVDIN 599 (821)
Q Consensus 571 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~ 599 (821)
+|+||||+||..|+.+++++|+++|+|+|
T Consensus 1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn 29 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIEIVKYLLEHGADVN 29 (30)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence 36677777777777777777777777665
No 127
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.61 E-value=5.2e-08 Score=64.07 Aligned_cols=33 Identities=42% Similarity=0.567 Sum_probs=28.1
Q ss_pred CCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCC
Q 003425 668 DLRTPLHVAASEGLYLMAKLLVEAGASVFPKDR 700 (821)
Q Consensus 668 ~g~T~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~ 700 (821)
+|+||||+|+..|+.+++++|+++|++++.+|+
T Consensus 1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~ 33 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLLLKHGADINARDN 33 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHHHHTTSCTTCBCT
T ss_pred CcccHHHHHHHHHHHHHHHHHHHCcCCCCCCCC
Confidence 488899999999999999999998888888764
No 128
>KOG2302 consensus T-type voltage-gated Ca2+ channel, pore-forming alpha1I subunit [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=98.59 E-value=2.5e-06 Score=94.72 Aligned_cols=123 Identities=18% Similarity=0.226 Sum_probs=70.0
Q ss_pred cCeEEcCCChhHH---------HHHHHHHHHHHHHhhhcceeeeeecCCC--cC-eehhHHHHHHHHHHhHhheeeEEEE
Q 003425 62 RNLVFHPDNRWYR---------AWTKFILIWAVYSSIFTPVEFGFFRGLS--KN-LYVLDIVGQIAFLFDIVLQFCLAYR 129 (821)
Q Consensus 62 ~~~~~~P~s~~~~---------~w~~~~~~~~~~~~~~~p~~~~f~~~~~--~~-~~~~~~~~~~~f~~Di~l~f~t~y~ 129 (821)
..++|.|+++|+. .+|.++++++.++++.+...-.-..... .. +.+-++++..+|++++.++...--.
T Consensus 1103 s~ylF~pQ~rFR~lc~~ii~hk~Fd~vVl~~IfLNcVtialerp~i~~~s~EriFltlsnyIFtaIfV~Em~lKVVALGl 1182 (1956)
T KOG2302|consen 1103 SKYLFSPQNRFRVLCQNIIQHKAFDTVVLFFIFLNCVTIALERPAIVEGSTERIFLTLSNYIFTAIFVVEMTLKVVALGL 1182 (1956)
T ss_pred HHHhcCcccHHHHHHHHHHHHhhhhheehhhhhhhhHHHHhcccccccCcceEEEEEecchHHHHHHHHHHHHHHHhhhh
Confidence 3679999999984 4566677777778777765532222221 22 3344589999999999886532211
Q ss_pred eCCceEEeeccHHHHHHHhhh-hhHHHHHhh----hhHHHHHhhcCchhHHHHHHHHHHHHHHHHHHHHHh
Q 003425 130 DSQTYRLICKRTPIALRYLRS-SFIIDLFSC----MPWDLIYKASGRKEAVRYLLWIRLYRVRKVSQFFHK 195 (821)
Q Consensus 130 ~~~~~~~v~~~~~I~~~Ylk~-~f~iDlis~----lP~~~~~~~~~~~~~~~~l~llrl~rl~r~~~~~~~ 195 (821)
-.|. ..|+++ |..+|.+-. +-+.+.....+...++..||.+|++|-+|..|.+.+
T Consensus 1183 ~fge-----------~aYl~ssWN~LDgflv~vsviDilvs~asa~g~kILgVlrvLRlLRtlRpLRviSr 1242 (1956)
T KOG2302|consen 1183 YFGE-----------QAYLRSSWNVLDGFLVAVSVIDILVSQASAGGAKILGVLRVLRLLRTLRPLRVISR 1242 (1956)
T ss_pred ccch-----------HHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHhhHHHHHhh
Confidence 1111 678887 777775433 222222333333444555555555555544444433
No 129
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=98.56 E-value=4.1e-08 Score=106.96 Aligned_cols=81 Identities=25% Similarity=0.347 Sum_probs=57.6
Q ss_pred CCCCCCCCCcHHHHHHHcCChHHHHHHHhcCCCCCccc---ccchhhHHHhcCCHHHHHHHHHCCCCCCCCCCCCCcHHH
Q 003425 598 INLKDNFGNTPLLEAIKYGNDGAASLLVKEGASLNVEE---AGSFLCTAVARGDSDLLKRVLSNGIDPNTRDYDLRTPLH 674 (821)
Q Consensus 598 ~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~---~~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~T~Lh 674 (821)
.|.+|..|+|+||+|+..+...++++|+++|++++.++ |.||||-|+..|+.+++-.||.+|+.+..+|++|.+||.
T Consensus 45 anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~ESG~taLHRaiyyG~idca~lLL~~g~SL~i~Dkeglsplq 124 (1267)
T KOG0783|consen 45 ANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQDEESGYTALHRAIYYGNIDCASLLLSKGRSLRIKDKEGLSPLQ 124 (1267)
T ss_pred hhHHHhhccceeeeeeccchhHHHHHHHhcCceeeeccccccchHhhHhhhhchHHHHHHHHhcCCceEEecccCCCHHH
Confidence 56677777778777777777777777777777766543 666777777777777777777777766667777777776
Q ss_pred HHHH
Q 003425 675 VAAS 678 (821)
Q Consensus 675 ~A~~ 678 (821)
..++
T Consensus 125 ~~~r 128 (1267)
T KOG0783|consen 125 FLSR 128 (1267)
T ss_pred HHhh
Confidence 6555
No 130
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.55 E-value=1.1e-07 Score=62.52 Aligned_cols=32 Identities=50% Similarity=0.926 Sum_probs=25.0
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Q 003425 571 DGRSPLHLAASRGYEEIMTFLIQKGVDINLKD 602 (821)
Q Consensus 571 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~ 602 (821)
+|.||||+|+..|+.+++++|+++|++++.+|
T Consensus 1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d 32 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLLLKHGADINARD 32 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHHHHTTSCTTCBC
T ss_pred CcccHHHHHHHHHHHHHHHHHHHCcCCCCCCC
Confidence 47788888888888888888888888877765
No 131
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.53 E-value=2e-07 Score=97.89 Aligned_cols=98 Identities=31% Similarity=0.375 Sum_probs=85.0
Q ss_pred chhhhHhhhHHHHhhcCCHHHHHHHHHcCCC--CC--CCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHH
Q 003425 534 KHEAELALKVNSAAYHGDLYQLEGLIRAGAD--PN--RTDYDGRSPLHLAASRGYEEIMTFLIQKGVDINLKDNFGNTPL 609 (821)
Q Consensus 534 ~~~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~--~n--~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~tpL 609 (821)
..+..-..-|..|+...|+..+-.||.+|.. +| ..+.+|+||||+||+.|++.+.++|+-+|+|+..+|.+|+|||
T Consensus 619 ~te~~lgqqLl~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~rda~g~t~l 698 (749)
T KOG0705|consen 619 CTEEPLGQQLLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMARDAHGRTAL 698 (749)
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCccceecccCCchhh
Confidence 3333344457789999999999999999854 34 3467889999999999999999999999999999999999999
Q ss_pred HHHHHcCChHHHHHHHhcCCCC
Q 003425 610 LEAIKYGNDGAASLLVKEGASL 631 (821)
Q Consensus 610 ~~A~~~~~~~~v~~Ll~~~~~~ 631 (821)
.||-+.|..+|+..|+++|...
T Consensus 699 ~yar~a~sqec~d~llq~gcp~ 720 (749)
T KOG0705|consen 699 FYARQAGSQECIDVLLQYGCPD 720 (749)
T ss_pred hhHhhcccHHHHHHHHHcCCCc
Confidence 9999999999999999998754
No 132
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=98.53 E-value=2e-07 Score=97.22 Aligned_cols=97 Identities=20% Similarity=0.191 Sum_probs=55.9
Q ss_pred CCCCCCCCCCCCcHHHHHHHcCChHHHHHHHhcCCC----CCcccccchhhHHHhcCCHHHHHHHHHCCCCCCCCCCCCC
Q 003425 595 GVDINLKDNFGNTPLLEAIKYGNDGAASLLVKEGAS----LNVEEAGSFLCTAVARGDSDLLKRVLSNGIDPNTRDYDLR 670 (821)
Q Consensus 595 g~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~----~~~~~~~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~ 670 (821)
|.++-.++.+..+.||+|+..|+-++|++++++|.. .-..+|.|+||.|+..++..+.++|++.|+.+...|..|.
T Consensus 889 gg~ll~~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~r~vc~~lvdagasl~ktd~kg~ 968 (1004)
T KOG0782|consen 889 GGSLLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRNRAVCQLLVDAGASLRKTDSKGK 968 (1004)
T ss_pred CCceEeeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcchHHHHHHHhcchhheecccCCC
Confidence 334444444444444444444444444444444421 1123455566666666666666666666667777777788
Q ss_pred cHHHHHHHcCcHHHHHHHHHc
Q 003425 671 TPLHVAASEGLYLMAKLLVEA 691 (821)
Q Consensus 671 T~Lh~A~~~g~~~~v~~Ll~~ 691 (821)
||-.-|-..|..+++.+|-.+
T Consensus 969 tp~eraqqa~d~dlaayle~r 989 (1004)
T KOG0782|consen 969 TPQERAQQAGDPDLAAYLESR 989 (1004)
T ss_pred ChHHHHHhcCCchHHHHHhhh
Confidence 888887777887777777543
No 133
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.51 E-value=2.6e-07 Score=96.76 Aligned_cols=86 Identities=36% Similarity=0.387 Sum_probs=67.2
Q ss_pred hhhHHHhcCCHHHHHHHH--HCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHH
Q 003425 639 FLCTAVARGDSDLLKRVL--SNGIDPNTRDYDLRTPLHVAASEGLYLMAKLLVEAGASVFPKDRWGNTPLDEGRMCGNKN 716 (821)
Q Consensus 639 ~l~~A~~~~~~~~v~~Ll--~~g~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~ 716 (821)
|+|.++...+.+-+..++ +.+..++..|..|+||||+|+..|+.+.++.|+.+||++..+|+.|++|||.|+..|+.+
T Consensus 23 ~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~~gWs~L~EAv~~g~~q 102 (560)
T KOG0522|consen 23 PLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSIKNNEGWSPLHEAVSTGNEQ 102 (560)
T ss_pred ccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccccccccccHHHHHHHcCCHH
Confidence 466666666655444433 235567888888999999999999999999999999999999999999999999999987
Q ss_pred HHHHHHhc
Q 003425 717 LIKLLEDA 724 (821)
Q Consensus 717 i~~~Ll~~ 724 (821)
++..++.+
T Consensus 103 ~i~~vlr~ 110 (560)
T KOG0522|consen 103 IITEVLRH 110 (560)
T ss_pred HHHHHHHH
Confidence 77665543
No 134
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=98.44 E-value=1.5e-07 Score=102.67 Aligned_cols=83 Identities=23% Similarity=0.231 Sum_probs=78.0
Q ss_pred ccchhhhHhhhHHHHhhcCCHHHHHHHHHcCCCCCCCCC-CCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHH
Q 003425 532 ISKHEAELALKVNSAAYHGDLYQLEGLIRAGADPNRTDY-DGRSPLHLAASRGYEEIMTFLIQKGVDINLKDNFGNTPLL 610 (821)
Q Consensus 532 ~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~n~~d~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~tpL~ 610 (821)
.+-.|.-|.++||.|+..|..+++++|+++|+|++.+|. .|+||||-|...|+.+|+-.||.+|+.+..+|++|.+||.
T Consensus 45 anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~ESG~taLHRaiyyG~idca~lLL~~g~SL~i~Dkeglsplq 124 (1267)
T KOG0783|consen 45 ANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQDEESGYTALHRAIYYGNIDCASLLLSKGRSLRIKDKEGLSPLQ 124 (1267)
T ss_pred hhHHHhhccceeeeeeccchhHHHHHHHhcCceeeeccccccchHhhHhhhhchHHHHHHHHhcCCceEEecccCCCHHH
Confidence 566788899999999999999999999999999999984 6999999999999999999999999999999999999999
Q ss_pred HHHH
Q 003425 611 EAIK 614 (821)
Q Consensus 611 ~A~~ 614 (821)
.-++
T Consensus 125 ~~~r 128 (1267)
T KOG0783|consen 125 FLSR 128 (1267)
T ss_pred HHhh
Confidence 8776
No 135
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=98.43 E-value=1.1e-06 Score=97.74 Aligned_cols=133 Identities=22% Similarity=0.151 Sum_probs=97.6
Q ss_pred hHhhhHHHHhhcCCHHHHHHHHHcC----CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHH
Q 003425 538 ELALKVNSAAYHGDLYQLEGLIRAG----ADPNRTDYDGRSPLHLAASRGYEEIMTFLIQKGVDINLKDNFGNTPLLEAI 613 (821)
Q Consensus 538 ~~~~~L~~A~~~g~~~~v~~Ll~~g----~~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~tpL~~A~ 613 (821)
.+......|+..|+...|+..++.. .++|..|.-|+++|+.|+.+.+.++.++|++++... ..+|.+|+
T Consensus 24 ~~e~~fL~a~E~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~-------gdALL~aI 96 (822)
T KOG3609|consen 24 EGEKGFLLAHENGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSEE-------GDALLLAI 96 (822)
T ss_pred hhhHHHHHHHHcCChHHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCcccc-------chHHHHHH
Confidence 3444567899999999999999753 468899999999999999999999999999986555 35899999
Q ss_pred HcCChHHHHHHHhcCCCCCcccccchhhHHHhcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHcCC
Q 003425 614 KYGNDGAASLLVKEGASLNVEEAGSFLCTAVARGDSDLLKRVLSNGIDPNTRDYDLRTPLHVAASEGLYLMAKLLVEAGA 693 (821)
Q Consensus 614 ~~~~~~~v~~Ll~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~ga 693 (821)
..|..++|+.++.+-........ .+......-..+-|||.+||..++.||++.|+++|+
T Consensus 97 ~~~~v~~VE~ll~~~~~~~~~~~---------------------~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~kg~ 155 (822)
T KOG3609|consen 97 AVGSVPLVELLLVHFVDAPYLER---------------------SGDANSPHFTPDITPLMLAAHLNNFEILQCLLTRGH 155 (822)
T ss_pred HHHHHHHHHHHHhcccccchhcc---------------------ccccCcccCCCCccHHHHHHHhcchHHHHHHHHcCC
Confidence 99999999999987433211110 111111222345677777777777777777777777
Q ss_pred CCCCC
Q 003425 694 SVFPK 698 (821)
Q Consensus 694 ~~~~~ 698 (821)
++...
T Consensus 156 ~i~~P 160 (822)
T KOG3609|consen 156 CIPIP 160 (822)
T ss_pred CCCCC
Confidence 76554
No 136
>KOG3684 consensus Ca2+-activated K+ channel proteins (intermediate/small conductance classes) [Inorganic ion transport and metabolism]
Probab=98.43 E-value=8.1e-06 Score=84.50 Aligned_cols=56 Identities=16% Similarity=0.261 Sum_probs=52.0
Q ss_pred HHHHHHHHHHHHHHhhccccCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003425 263 WKSYITSMYASVVTMTTVGYGDVHAVNLREMVFIMIYVSFDMILGAYLIGNMTALI 318 (821)
Q Consensus 263 ~~~Y~~s~yw~~~t~tTvGyGdi~p~t~~e~~~~~~~~i~g~~~~a~~i~~i~~~~ 318 (821)
-..|+.|+|...+|..++||||++|.|.-|+.+++++-++|.++.|.+++.++--+
T Consensus 285 ~~~~~nsmWli~iTFlsiGYGDiVP~TycGr~v~l~tGivGa~~sallvAvisRKL 340 (489)
T KOG3684|consen 285 TINYLNSMWLIAITFLSIGYGDIVPNTYCGRGVALLTGIVGAGCSSLLVAVIARKL 340 (489)
T ss_pred HHHHHhhHHHHHHHHhhcccCcccCCccccchHHHHhhhhhhhHHHHHHHHHHHHH
Confidence 35799999999999999999999999999999999999999999999999886644
No 137
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.40 E-value=5.9e-07 Score=94.19 Aligned_cols=87 Identities=32% Similarity=0.432 Sum_probs=76.7
Q ss_pred hhHHHHhhcCCHHHHHHHHHc--CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCh
Q 003425 541 LKVNSAAYHGDLYQLEGLIRA--GADPNRTDYDGRSPLHLAASRGYEEIMTFLIQKGVDINLKDNFGNTPLLEAIKYGND 618 (821)
Q Consensus 541 ~~L~~A~~~g~~~~v~~Ll~~--g~~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~tpL~~A~~~~~~ 618 (821)
.|+|+++...+.+-+...+.. +..++..|..|.||||+|+..|+.+.++.|+.+|+++..+|+.|++|||-|+..|+.
T Consensus 22 ~~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~~gWs~L~EAv~~g~~ 101 (560)
T KOG0522|consen 22 KPLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSIKNNEGWSPLHEAVSTGNE 101 (560)
T ss_pred cccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccccccccccHHHHHHHcCCH
Confidence 569999999988887775543 556888999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhc
Q 003425 619 GAASLLVKE 627 (821)
Q Consensus 619 ~~v~~Ll~~ 627 (821)
.++..++.+
T Consensus 102 q~i~~vlr~ 110 (560)
T KOG0522|consen 102 QIITEVLRH 110 (560)
T ss_pred HHHHHHHHH
Confidence 888777654
No 138
>KOG2968 consensus Predicted esterase of the alpha-beta hydrolase superfamily (Neuropathy target esterase), contains cAMP-binding domains [General function prediction only]
Probab=98.29 E-value=5.1e-07 Score=99.89 Aligned_cols=113 Identities=23% Similarity=0.308 Sum_probs=101.8
Q ss_pred HHHHHHHhcccccccccCeEEccCCccCeEEEEEeeEEEEEeeccCCccceEEEeCCCCccccccccccCCcceEEEEec
Q 003425 402 FINQIVIRLHEEFFLPGEVIMEKGNVVDQLYFVCLGKLEEVGIEENGTEDYVSYLHPNSSFGEVSILCNIPQPYTVQVCE 481 (821)
Q Consensus 402 ~l~~l~~~~~~~~~~~~e~I~~~g~~~~~ly~I~~G~v~~~~~~~~g~~~~i~~l~~G~~fGe~~~~~~~~~~~~~~a~~ 481 (821)
++..+-..+....+.||+.++++||..|++|+|..|.++.......|+..++..++.||.+|+...+++++|..|+.|+.
T Consensus 500 ~lr~~D~AldWv~l~~g~alyrqgD~Sd~iyvVl~GRlRsv~~~~~~k~~i~~EygrGd~iG~~E~lt~~~R~tTv~AvR 579 (1158)
T KOG2968|consen 500 FLRKLDFALDWVRLEPGQALYRQGDSSDSIYVVLNGRLRSVIRQSGGKKEIVGEYGRGDLIGEVEMLTKQPRATTVMAVR 579 (1158)
T ss_pred HHhhhhhhcceEEeccccHHHhcCCccCcEEEEecCeehhhhhccCccchhhhhccCcceeehhHHhhcCCccceEEEEe
Confidence 55666677788899999999999999999999999999988766677777889999999999999999999999999999
Q ss_pred ceEEEEechHhHHHHHHHhhhchHHHHHHHhcC
Q 003425 482 LCRLLRIDKQSFTNIIDIYFCDGRKVLTNLLQG 514 (821)
Q Consensus 482 ~~~~~~i~~~~f~~~l~~~p~~~~~~l~~~l~~ 514 (821)
++++.+||..-|..+..+||....++.+.+.+.
T Consensus 580 dSelariPe~l~~~ik~ryP~v~~rl~~ll~~~ 612 (1158)
T KOG2968|consen 580 DSELARIPEGLLNFIKLRYPQVVTRLIKLLAEK 612 (1158)
T ss_pred ehhhhhccHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 999999999999999999999988777766653
No 139
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=98.29 E-value=4.6e-07 Score=104.14 Aligned_cols=90 Identities=38% Similarity=0.430 Sum_probs=84.3
Q ss_pred cccchhhHHHhcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCC
Q 003425 635 EAGSFLCTAVARGDSDLLKRVLSNGIDPNTRDYDLRTPLHVAASEGLYLMAKLLVEAGASVFPKDRWGNTPLDEGRMCGN 714 (821)
Q Consensus 635 ~~~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~ 714 (821)
.|.+++|.|+..+..-+++.|+++|+++|..|..|+||||.+...|+...+..|+++||+.+..|..|.+|+++|....+
T Consensus 655 ~~~s~lh~a~~~~~~~~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a~~~~~~~~l~~a~~~~~ 734 (785)
T KOG0521|consen 655 IGCSLLHVAVGTGDSGAVELLLQNGADVNALDSKGRTPLHHATASGHTSIACLLLKRGADPNAFDPDGKLPLDIAMEAAN 734 (785)
T ss_pred cccchhhhhhccchHHHHHHHHhcCCcchhhhccCCCcchhhhhhcccchhhhhccccccccccCccCcchhhHHhhhcc
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999988888
Q ss_pred HHHHHHHHhc
Q 003425 715 KNLIKLLEDA 724 (821)
Q Consensus 715 ~~i~~~Ll~~ 724 (821)
.+++-+|.-.
T Consensus 735 ~d~~~l~~l~ 744 (785)
T KOG0521|consen 735 ADIVLLLRLA 744 (785)
T ss_pred ccHHHHHhhh
Confidence 7777666544
No 140
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=98.26 E-value=2.6e-06 Score=77.29 Aligned_cols=70 Identities=23% Similarity=0.109 Sum_probs=64.9
Q ss_pred CCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHcC-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccccc
Q 003425 659 GIDPNTRDYDLRTPLHVAASEGLYLMAKLLVEAG-ASVFPKDRWGNTPLDEGRMCGNKNLIKLLEDAKSTQ 728 (821)
Q Consensus 659 g~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g-a~~~~~d~~g~t~l~~A~~~~~~~i~~~Ll~~~a~~ 728 (821)
+.++|.+|..|+|||+.|+..|+.+.+.+|+.+| +++...|..|.+++.+|-+.|+.++++.|.+.-.+.
T Consensus 2 e~~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~~et 72 (223)
T KOG2384|consen 2 EGNINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFENDRET 72 (223)
T ss_pred CCCccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHHhccC
Confidence 4689999999999999999999999999999999 899999999999999999999999999998874443
No 141
>PF01007 IRK: Inward rectifier potassium channel; InterPro: IPR013521 Potassium channels are the most diverse group of the ion channel family [, ]. They are important in shaping the action potential, and in neuronal excitability and plasticity []. The potassium channel family is composed of several functionally distinct isoforms, which can be broadly separated into 2 groups []: the practically non-inactivating 'delayed' group and the rapidly inactivating 'transient' group. These are all highly similar proteins, with only small amino acid changes causing the diversity of the voltage-dependent gating mechanism, channel conductance and toxin binding properties. Each type of K+ channel is activated by different signals and conditions depending on their type of regulation: some open in response to depolarisation of the plasma membrane; others in response to hyperpolarisation or an increase in intracellular calcium concentration; some can be regulated by binding of a transmitter, together with intracellular kinases; while others are regulated by GTP-binding proteins or other second messengers []. In eukaryotic cells, K+ channels are involved in neural signalling and generation of the cardiac rhythm, act as effectors in signal transduction pathways involving G protein-coupled receptors (GPCRs) and may have a role in target cell lysis by cytotoxic T-lymphocytes []. In prokaryotic cells, they play a role in the maintenance of ionic homeostasis []. All K+ channels discovered so far possess a core of alpha subunits, each comprising either one or two copies of a highly conserved pore loop domain (P-domain). The P-domain contains the sequence (T/SxxTxGxG), which has been termed the K+ selectivity sequence. In families that contain one P-domain, four subunits assemble to form a selective pathway for K+ across the membrane. However, it remains unclear how the 2 P-domain subunits assemble to form a selective pore. The functional diversity of these families can arise through homo- or hetero-associations of alpha subunits or association with auxiliary cytoplasmic beta subunits. K+ channel subunits containing one pore domain can be assigned into one of two superfamilies: those that possess six transmembrane (TM) domains and those that possess only two TM domains. The six TM domain superfamily can be further subdivided into conserved gene families: the voltage-gated (Kv) channels; the KCNQ channels (originally known as KvLQT channels); the EAG-like K+ channels; and three types of calcium (Ca)-activated K+ channels (BK, IK and SK) []. The 2TM domain family comprises inward-rectifying K+ channels. In addition, there are K+ channel alpha-subunits that possess two P-domains. These are usually highly regulated K+ selective leak channels. Inwardly-rectifying potassium channels (Kir) are the principal class of two-TM domain potassium channels. They are characterised by the property of inward-rectification, which is described as the ability to allow large inward currents and smaller outward currents. Inwardly rectifying potassium channels (Kir) are responsible for regulating diverse processes including: cellular excitability, vascular tone, heart rate, renal salt flow, and insulin release []. To date, around twenty members of this superfamily have been cloned, which can be grouped into six families by sequence similarity, and these are designated Kir1.x-6.x [, ]. Cloned Kir channel cDNAs encode proteins of between ~370-500 residues, both N- and C-termini are thought to be cytoplasmic, and the N terminus lacks a signal sequence. Kir channel alpha subunits possess only 2TM domains linked with a P-domain. Thus, Kir channels share similarity with the fifth and sixth domains, and P-domain of the other families. It is thought that four Kir subunits assemble to form a tetrameric channel complex, which may be hetero- or homomeric [].; PDB: 3AT9_A 3AUW_D 3SYA_A 3ATE_A 3SYQ_A 3SYO_A 3ATB_A 3SYC_A 3AT8_A 3ATA_A ....
Probab=98.22 E-value=7.5e-06 Score=85.35 Aligned_cols=99 Identities=19% Similarity=0.271 Sum_probs=68.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHccCCCCCC---CCceeccccCCCCCcccccccchHHHHHHHHHHHHHHhhccccCc--
Q 003425 210 VKLIAVELYCSHIAACIFYYLATTLPPEQE---GYTWIGSLKMGDYSYADFREIGFWKSYITSMYASVVTMTTVGYGD-- 284 (821)
Q Consensus 210 ~~~~~~~l~~~h~~ac~~~~i~~~~~~~~~---~~~w~~~~~~~~~~~~~~~~~~~~~~Y~~s~yw~~~t~tTvGyGd-- 284 (821)
+.+++.+++...+||++||.++....+-.. ...|.+ +. .-...+..+|+|++.|+||||||.
T Consensus 39 ~~f~~~y~~~~~~Fa~~y~~i~~~~gdl~~~~~~~~~~~-Cv------------~~~~~f~~aF~FSveT~tTIGYG~~~ 105 (336)
T PF01007_consen 39 LLFVLSYLLSWLFFALLYYLIAYSHGDLEPIHADSNWTP-CV------------SNVNSFTSAFLFSVETQTTIGYGSRY 105 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTSCCTTTSBTTS-T-SE------------CT-TTHHHHHHHHHHHHTT---SSSE
T ss_pred ehhHHHHHHHHHHHHHHHHHHhhhcccchhcccccCCCC-ce------------ecccchhhheeEEEEEEEEeccCCcc
Confidence 344455667777899999988754221111 111110 00 012368899999999999999999
Q ss_pred cccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 003425 285 VHAVNLREMVFIMIYVSFDMILGAYLIGNMTALIVKG 321 (821)
Q Consensus 285 i~p~t~~e~~~~~~~~i~g~~~~a~~i~~i~~~~~~~ 321 (821)
++|..+...++.++-+++|+++.|+++|.+.+-++.-
T Consensus 106 ~~~~c~~a~~l~~~q~~~g~l~~a~~~Glvfar~srP 142 (336)
T PF01007_consen 106 PTPECPYAIFLVTIQSLVGLLLDAFMTGLVFARFSRP 142 (336)
T ss_dssp B-CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSC
T ss_pred cCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 6788899999999999999999999999999988773
No 142
>PF08412 Ion_trans_N: Ion transport protein N-terminal; InterPro: IPR013621 This domain is found to the N terminus of IPR005821 from INTERPRO in voltage- and cyclic nucleotide-gated K/Na ion channels.
Probab=98.09 E-value=3.9e-06 Score=65.78 Aligned_cols=40 Identities=25% Similarity=0.548 Sum_probs=36.6
Q ss_pred cCeEEcCCChhHHHHHHHHHHHHHHHhhhcceeeeeecCC
Q 003425 62 RNLVFHPDNRWYRAWTKFILIWAVYSSIFTPVEFGFFRGL 101 (821)
Q Consensus 62 ~~~~~~P~s~~~~~w~~~~~~~~~~~~~~~p~~~~f~~~~ 101 (821)
..++|||+|.++.+||++++++++++++++|+.++|..+.
T Consensus 35 ~~~IIHP~S~fR~~WD~~m~~~~~~~~~~iP~~isF~~d~ 74 (77)
T PF08412_consen 35 GPWIIHPFSKFRFYWDLIMLILLLYNLIIIPFRISFFSDE 74 (77)
T ss_pred CCeEEcCCccHHHHHHHHHHHHHHHHHHHHhhhheEecCc
Confidence 3569999999999999999999999999999999997654
No 143
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=98.08 E-value=1.4e-05 Score=89.15 Aligned_cols=134 Identities=22% Similarity=0.209 Sum_probs=93.0
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcC----CCCCCCCCCCCcHHHHHHHcCChHHHHHHHhcCCCCCcccccchhhHHHhcC
Q 003425 572 GRSPLHLAASRGYEEIMTFLIQKG----VDINLKDNFGNTPLLEAIKYGNDGAASLLVKEGASLNVEEAGSFLCTAVARG 647 (821)
Q Consensus 572 g~t~L~~A~~~g~~~~v~~Ll~~g----~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~t~l~~A~~~~ 647 (821)
+.-....|+..|+...|+..++.. .++|..|.-|+++|+.|+.+.+.+++++|++++... ..+|.+|+..|
T Consensus 25 ~e~~fL~a~E~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~-----gdALL~aI~~~ 99 (822)
T KOG3609|consen 25 GEKGFLLAHENGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSEE-----GDALLLAIAVG 99 (822)
T ss_pred hhHHHHHHHHcCChHHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCcccc-----chHHHHHHHHH
Confidence 344566788888888888887742 457777888888888888888888888888876543 44566666677
Q ss_pred CHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcccc
Q 003425 648 DSDLLKRVLSNGIDPNTRDYDLRTPLHVAASEGLYLMAKLLVEAGASVFPKDRWGNTPLDEGRMCGNKNLIKLLEDAKST 727 (821)
Q Consensus 648 ~~~~v~~Ll~~g~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~i~~~Ll~~~a~ 727 (821)
...+|+.++.+....... +. .+......-.-+.||+.+||..+|.||++.|++.|++
T Consensus 100 ~v~~VE~ll~~~~~~~~~--------~~---------------~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~kg~~ 156 (822)
T KOG3609|consen 100 SVPLVELLLVHFVDAPYL--------ER---------------SGDANSPHFTPDITPLMLAAHLNNFEILQCLLTRGHC 156 (822)
T ss_pred HHHHHHHHHhcccccchh--------cc---------------ccccCcccCCCCccHHHHHHHhcchHHHHHHHHcCCC
Confidence 777777766653222111 11 1112222334578999999999999999999999998
Q ss_pred ccccCC
Q 003425 728 QLLEFP 733 (821)
Q Consensus 728 ~~~~~~ 733 (821)
...+..
T Consensus 157 i~~PH~ 162 (822)
T KOG3609|consen 157 IPIPHD 162 (822)
T ss_pred CCCCcc
Confidence 755443
No 144
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.04 E-value=1.1e-05 Score=80.89 Aligned_cols=75 Identities=23% Similarity=0.241 Sum_probs=63.9
Q ss_pred hhhHHHHhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHc
Q 003425 540 ALKVNSAAYHGDLYQLEGLIRAGADPNRTDYDGRSPLHLAASRGYEEIMTFLIQKGVDINLKDNFGNTPLLEAIKY 615 (821)
Q Consensus 540 ~~~L~~A~~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~tpL~~A~~~ 615 (821)
.--|+.||+.|+++.|++|++.|.++|+.|.-..+||.+|+..||.++|++|+++||-...-..+|.-+ |+++.+
T Consensus 37 f~elceacR~GD~d~v~~LVetgvnVN~vD~fD~spL~lAsLcGHe~vvklLLenGAiC~rdtf~G~RC-~YgaLn 111 (516)
T KOG0511|consen 37 FGELCEACRAGDVDRVRYLVETGVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGAICSRDTFDGDRC-HYGALN 111 (516)
T ss_pred hHHHHHHhhcccHHHHHHHHHhCCCcchhhcccccHHHHHHHcCcHHHHHHHHHcCCcccccccCcchh-hhhhhh
Confidence 345899999999999999999999999999999999999999999999999999998766544556554 444443
No 145
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=98.00 E-value=7.9e-06 Score=93.17 Aligned_cols=128 Identities=26% Similarity=0.239 Sum_probs=91.6
Q ss_pred CCCCCCCCcHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCcHHHHHHHcCChHHHHHHHhcCCCCCcccccchhhHHH
Q 003425 566 NRTDYDGRSPLHLAASRGYEEIMTFLIQK-GVDINLKDNFGNTPLLEAIKYGNDGAASLLVKEGASLNVEEAGSFLCTAV 644 (821)
Q Consensus 566 n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~t~l~~A~ 644 (821)
......|+|.+|+++..++.-+++.+++- |......|.+|...+|.+ ..++.+.+-+|+
T Consensus 568 ~~~~~r~~lllhL~a~~lyawLie~~~e~~~~~~~eld~d~qgV~hfc-a~lg~ewA~ll~------------------- 627 (975)
T KOG0520|consen 568 SSVNFRDMLLLHLLAELLYAWLIEKVIEWAGSGDLELDRDGQGVIHFC-AALGYEWAFLPI------------------- 627 (975)
T ss_pred ccCCCcchHHHHHHHHHhHHHHHHHHhcccccCchhhcccCCChhhHh-hhcCCceeEEEE-------------------
Confidence 34445677788888888777777777774 555555566666666663 333333333222
Q ss_pred hcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCC------CCCCCCCCCHHHHHHHcCCHHHH
Q 003425 645 ARGDSDLLKRVLSNGIDPNTRDYDLRTPLHVAASEGLYLMAKLLVEAGASV------FPKDRWGNTPLDEGRMCGNKNLI 718 (821)
Q Consensus 645 ~~~~~~~v~~Ll~~g~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~ga~~------~~~d~~g~t~l~~A~~~~~~~i~ 718 (821)
.-+|..++.+|..|+||||+|+..|+..++..|++.|++. +..+..|.|+-..|..+|+..+.
T Consensus 628 -----------~~~~~ai~i~D~~G~tpL~wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia 696 (975)
T KOG0520|consen 628 -----------SADGVAIDIRDRNGWTPLHWAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIA 696 (975)
T ss_pred -----------eecccccccccCCCCcccchHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchH
Confidence 2356788889999999999999999999999999877654 33445699999999999999888
Q ss_pred HHHHhc
Q 003425 719 KLLEDA 724 (821)
Q Consensus 719 ~~Ll~~ 724 (821)
.+|-+.
T Consensus 697 ~~lse~ 702 (975)
T KOG0520|consen 697 GYLSEK 702 (975)
T ss_pred HHHhhh
Confidence 888665
No 146
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=97.97 E-value=1.1e-05 Score=92.10 Aligned_cols=128 Identities=23% Similarity=0.167 Sum_probs=102.0
Q ss_pred ccccchhhhHhhhHHHHhhcCCHHHHHHHHHc-CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHH-HcCCCCCCCCCCCCc
Q 003425 530 FHISKHEAELALKVNSAAYHGDLYQLEGLIRA-GADPNRTDYDGRSPLHLAASRGYEEIMTFLI-QKGVDINLKDNFGNT 607 (821)
Q Consensus 530 ~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~-g~~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll-~~g~~~~~~~~~g~t 607 (821)
.........|++-+|.++..+..-.++.+++. |-..+..|.+|.-.+|.+| .++.+.+-+|+ -+|..++.+|..|+|
T Consensus 565 ~~~~~~~~r~~lllhL~a~~lyawLie~~~e~~~~~~~eld~d~qgV~hfca-~lg~ewA~ll~~~~~~ai~i~D~~G~t 643 (975)
T KOG0520|consen 565 NLSSSVNFRDMLLLHLLAELLYAWLIEKVIEWAGSGDLELDRDGQGVIHFCA-ALGYEWAFLPISADGVAIDIRDRNGWT 643 (975)
T ss_pred hccccCCCcchHHHHHHHHHhHHHHHHHHhcccccCchhhcccCCChhhHhh-hcCCceeEEEEeecccccccccCCCCc
Confidence 34456667889999999999999999999986 6667777788888888844 45555555554 468899999999999
Q ss_pred HHHHHHHcCChHHHHHHHhcCCCCCc--------ccccchhhHHHhcCCHHHHHHHHHC
Q 003425 608 PLLEAIKYGNDGAASLLVKEGASLNV--------EEAGSFLCTAVARGDSDLLKRVLSN 658 (821)
Q Consensus 608 pL~~A~~~~~~~~v~~Ll~~~~~~~~--------~~~~t~l~~A~~~~~~~~v~~Ll~~ 658 (821)
|||+|+..|+..++..|++.|++... ..|.|+...|..+|+..+..+|-+.
T Consensus 644 pL~wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~lse~ 702 (975)
T KOG0520|consen 644 PLHWAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYLSEK 702 (975)
T ss_pred ccchHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchHHHHhhh
Confidence 99999999999999999988765443 2467777788888888777777664
No 147
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.96 E-value=2.8e-05 Score=78.03 Aligned_cols=69 Identities=29% Similarity=0.320 Sum_probs=50.2
Q ss_pred chhhHHHhcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHH
Q 003425 638 SFLCTAVARGDSDLLKRVLSNGIDPNTRDYDLRTPLHVAASEGLYLMAKLLVEAGASVFPKDRWGNTPL 706 (821)
Q Consensus 638 t~l~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l 706 (821)
.-|+.||+.|+.+.|++|++.|.++|..|.-..+||.+|+..||.++|++|+++||-.+.-...|.-++
T Consensus 38 ~elceacR~GD~d~v~~LVetgvnVN~vD~fD~spL~lAsLcGHe~vvklLLenGAiC~rdtf~G~RC~ 106 (516)
T KOG0511|consen 38 GELCEACRAGDVDRVRYLVETGVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGAICSRDTFDGDRCH 106 (516)
T ss_pred HHHHHHhhcccHHHHHHHHHhCCCcchhhcccccHHHHHHHcCcHHHHHHHHHcCCcccccccCcchhh
Confidence 346777777777777777777777777777777788888878888888888887776555445555543
No 148
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=97.91 E-value=9.7e-06 Score=93.47 Aligned_cols=91 Identities=32% Similarity=0.350 Sum_probs=62.5
Q ss_pred cchhhhHhhhHHHHhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHH
Q 003425 533 SKHEAELALKVNSAAYHGDLYQLEGLIRAGADPNRTDYDGRSPLHLAASRGYEEIMTFLIQKGVDINLKDNFGNTPLLEA 612 (821)
Q Consensus 533 ~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~tpL~~A 612 (821)
...-..|.++||.|+..|..-+++.|++.|+++|..|..|+||||.+...|+...+..|+++|++++..+.+|.+|+++|
T Consensus 650 ~~~~~~~~s~lh~a~~~~~~~~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a~~~~~~~~l~~a 729 (785)
T KOG0521|consen 650 PVVLCIGCSLLHVAVGTGDSGAVELLLQNGADVNALDSKGRTPLHHATASGHTSIACLLLKRGADPNAFDPDGKLPLDIA 729 (785)
T ss_pred chhhhcccchhhhhhccchHHHHHHHHhcCCcchhhhccCCCcchhhhhhcccchhhhhccccccccccCccCcchhhHH
Confidence 33444556777777777777777777777777777777777777777777777777777777777777777777777777
Q ss_pred HHcCChHHHHH
Q 003425 613 IKYGNDGAASL 623 (821)
Q Consensus 613 ~~~~~~~~v~~ 623 (821)
....+.+.+-+
T Consensus 730 ~~~~~~d~~~l 740 (785)
T KOG0521|consen 730 MEAANADIVLL 740 (785)
T ss_pred hhhccccHHHH
Confidence 66555554433
No 149
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=97.91 E-value=2.5e-05 Score=71.02 Aligned_cols=67 Identities=22% Similarity=0.241 Sum_probs=59.9
Q ss_pred CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcC-CCCCCCCCCCCcHHHHHHHcCChHHHHHHHhcC
Q 003425 562 GADPNRTDYDGRSPLHLAASRGYEEIMTFLIQKG-VDINLKDNFGNTPLLEAIKYGNDGAASLLVKEG 628 (821)
Q Consensus 562 g~~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~ 628 (821)
+.++|.+|..|||||++|+..|+.+.+.||+.+| +.+...|..|.+++.+|-+.|..+.++.|-+.-
T Consensus 2 e~~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~ 69 (223)
T KOG2384|consen 2 EGNINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFEND 69 (223)
T ss_pred CCCccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHHh
Confidence 4678899999999999999999999999999999 889999999999999999999999999888763
No 150
>KOG1418 consensus Tandem pore domain K+ channel [Inorganic ion transport and metabolism]
Probab=97.78 E-value=0.00019 Score=80.30 Aligned_cols=56 Identities=18% Similarity=0.448 Sum_probs=52.4
Q ss_pred HHHHHHHHHHHHhhccccCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 003425 265 SYITSMYASVVTMTTVGYGDVHAVNLREMVFIMIYVSFDMILGAYLIGNMTALIVK 320 (821)
Q Consensus 265 ~Y~~s~yw~~~t~tTvGyGdi~p~t~~e~~~~~~~~i~g~~~~a~~i~~i~~~~~~ 320 (821)
.+..|+|++++++||+|||++.|.|..|++++++..++|+=++.++++.++..+..
T Consensus 115 ~f~~al~fs~tv~TTIGYG~i~P~T~~Gr~~~i~YaliGIPl~li~l~~~g~~l~~ 170 (433)
T KOG1418|consen 115 SFSSALLFSITVITTIGYGNIAPRTDAGRLFTILYALVGIPLMLLILADIGKFLAD 170 (433)
T ss_pred ecchhHhhhhheeeeccCCcccCCcCcchhHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 47799999999999999999999999999999999999999999999999887754
No 151
>KOG4404 consensus Tandem pore domain K+ channel TASK3/THIK-1 [Inorganic ion transport and metabolism]
Probab=97.72 E-value=0.00015 Score=71.95 Aligned_cols=56 Identities=23% Similarity=0.450 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHHhhccccCccccCC-------hhH-HHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 003425 265 SYITSMYASVVTMTTVGYGDVHAVN-------LRE-MVFIMIYVSFDMILGAYLIGNMTALIVK 320 (821)
Q Consensus 265 ~Y~~s~yw~~~t~tTvGyGdi~p~t-------~~e-~~~~~~~~i~g~~~~a~~i~~i~~~~~~ 320 (821)
.|.+|+||.++|+||+|+||.++-- ..+ +.+..+++++|+.+++-.++.+.-.+.+
T Consensus 186 syfds~YyCFITltTIGFGDyValQ~~~alq~qplYv~~sf~fIL~Gl~vi~a~~NllvLrf~t 249 (350)
T KOG4404|consen 186 SYFDSYYYCFITLTTIGFGDYVALQQDAALQSQPLYVFFSFVFILLGLCVIYALLNLLVLRFMT 249 (350)
T ss_pred chhhhhheeeeeeeeccccchhhhcchhhhhCCCceehHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5999999999999999999998842 233 3567788889999888877766555544
No 152
>KOG2968 consensus Predicted esterase of the alpha-beta hydrolase superfamily (Neuropathy target esterase), contains cAMP-binding domains [General function prediction only]
Probab=97.60 E-value=0.00019 Score=80.31 Aligned_cols=108 Identities=19% Similarity=0.296 Sum_probs=93.3
Q ss_pred HHHhcccccccccCeEEccCCccCeEEEEEeeEEEEEeeccCCccceEEEeCCCCcccccc-c---cccCC---cceEEE
Q 003425 406 IVIRLHEEFFLPGEVIMEKGNVVDQLYFVCLGKLEEVGIEENGTEDYVSYLHPNSSFGEVS-I---LCNIP---QPYTVQ 478 (821)
Q Consensus 406 l~~~~~~~~~~~~e~I~~~g~~~~~ly~I~~G~v~~~~~~~~g~~~~i~~l~~G~~fGe~~-~---~~~~~---~~~~~~ 478 (821)
++.+++...+..|++|++.|++.+.+|.+.+|.+.+...+.+|++..+....+|+.|.... + +.+.| +...++
T Consensus 111 L~rh~~t~~l~~Gd~i~~~~~~dd~i~vv~sg~l~v~~~~~~g~~~llk~V~~G~~~tSllSiLd~l~~~ps~~~~i~ak 190 (1158)
T KOG2968|consen 111 LDRHIETLSLDAGDYIFKPGESDDSIYVVISGELTVHIRNGDGKEYLLKTVPPGGSFTSLLSILDSLPGFPSLSRTIAAK 190 (1158)
T ss_pred echhhhhhcccCCceeccCCCCCceEEEEeccceEEEecCCCCceeeEeeccCCCchHhHHHHHHhccCCCcccceeeee
Confidence 3477888899999999999999999999999999999999999999999999997665442 3 33444 467899
Q ss_pred EecceEEEEechHhHHHHHHHhhhchHHHHHHHhc
Q 003425 479 VCELCRLLRIDKQSFTNIIDIYFCDGRKVLTNLLQ 513 (821)
Q Consensus 479 a~~~~~~~~i~~~~f~~~l~~~p~~~~~~l~~~l~ 513 (821)
|.++|.+.++|...|.+...++|+-...+.+.++.
T Consensus 191 A~t~~tv~~~p~~sF~~~~~k~P~s~iriiQvvmT 225 (1158)
T KOG2968|consen 191 AATDCTVARIPYTSFRESFHKNPESSIRIIQVVMT 225 (1158)
T ss_pred eecCceEEEeccchhhhhhccChHHHHHHHHHHHH
Confidence 99999999999999999999999988887776654
No 153
>KOG3193 consensus K+ channel subunit [Inorganic ion transport and metabolism]
Probab=97.41 E-value=7.4e-05 Score=78.30 Aligned_cols=51 Identities=25% Similarity=0.364 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHhhccccCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003425 266 YITSMYASVVTMTTVGYGDVHAVNLREMVFIMIYVSFDMILGAYLIGNMTA 316 (821)
Q Consensus 266 Y~~s~yw~~~t~tTvGyGdi~p~t~~e~~~~~~~~i~g~~~~a~~i~~i~~ 316 (821)
...|+||.++|.+||||||..|.-|...+..++++-+..++..--+-.++.
T Consensus 218 lf~s~y~v~vtfstvgygd~~pd~w~sql~~vi~icval~~ip~q~~~l~~ 268 (1087)
T KOG3193|consen 218 LFTSFYFVMVTFSTVGYGDWYPDYWASQLCVVILICVALGLIPKQLDELGQ 268 (1087)
T ss_pred eeeeEEEEEEEEeeccccccccccchhhHHHHHHHHHHHhccHHHHHHHHH
Confidence 447899999999999999999999988887776655555555444444443
No 154
>KOG4404 consensus Tandem pore domain K+ channel TASK3/THIK-1 [Inorganic ion transport and metabolism]
Probab=97.17 E-value=0.00017 Score=71.58 Aligned_cols=50 Identities=20% Similarity=0.400 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHHhhccccCccccCChhHHHHHHHHHHHHHHHHHHHHHHH
Q 003425 265 SYITSMYASVVTMTTVGYGDVHAVNLREMVFIMIYVSFDMILGAYLIGNM 314 (821)
Q Consensus 265 ~Y~~s~yw~~~t~tTvGyGdi~p~t~~e~~~~~~~~i~g~~~~a~~i~~i 314 (821)
++.-||||+++.+||+|||--+|.|..|++|+++..++|+-+.-..+..+
T Consensus 80 kF~GaFYFa~TVItTIGyGhstP~T~~GK~Fcm~Yal~Gipl~lvmFqs~ 129 (350)
T KOG4404|consen 80 KFAGAFYFATTVITTIGYGHSTPSTDGGKAFCMFYALVGIPLTLVMFQSI 129 (350)
T ss_pred ccCcceEEEEEEEeeeccCCCCCCCcCceehhhhHHHhcCchHHHHHHHH
Confidence 57789999999999999999999999999999999998887665555444
No 155
>PF04831 Popeye: Popeye protein conserved region; InterPro: IPR006916 The Popeye (POP) family of proteins, is restricted to vertebrates and is preferentially expressed in developing and adult striated muscle. It is represented by a conserved region which includes three potential transmembrane domains []. The strong conservation of POP genes during evolution and their preferential expression in heart and skeletal muscle suggest that these novel proteins may have an important function in these tissues in vertebrates.; GO: 0016020 membrane
Probab=97.17 E-value=0.006 Score=54.32 Aligned_cols=105 Identities=16% Similarity=0.166 Sum_probs=84.7
Q ss_pred CCCHHHHHHHHHh-cccccccccCeEEccC-CccCeEEEEEeeEEEEEeeccCCccceEEEeCCCCcccccccccc----
Q 003425 397 GCSSEFINQIVIR-LHEEFFLPGEVIMEKG-NVVDQLYFVCLGKLEEVGIEENGTEDYVSYLHPNSSFGEVSILCN---- 470 (821)
Q Consensus 397 ~~~~~~l~~l~~~-~~~~~~~~~e~I~~~g-~~~~~ly~I~~G~v~~~~~~~~g~~~~i~~l~~G~~fGe~~~~~~---- 470 (821)
+.|.....+|+.. .+.....+|+.-.-|| .+.|.+-++++|.+++.. +| ..+.++.|.+|.....+...
T Consensus 14 ~Vs~~~Fk~iv~~~~~i~~L~~~~~YAvE~~T~~drLSlLLsGr~~Vs~---~g--~fLH~I~p~qFlDSPEW~s~~~s~ 88 (153)
T PF04831_consen 14 KVSRQQFKKIVGCCCEIRTLKKGETYAVEGKTPIDRLSLLLSGRMRVSC---DG--RFLHYIYPYQFLDSPEWESLRPSE 88 (153)
T ss_pred CCCHHHHHHHHhhhceEEEecCCceeeecCCcccceEeEEEcCcEEEEE---CC--EeeEeecccccccChhhhccccCC
Confidence 4677777888877 6678999999988888 467899999999999987 44 35777788877776665543
Q ss_pred -CCcceEEEEecceEEEEechHhHHHHHHHhhhchHH
Q 003425 471 -IPQPYTVQVCELCRLLRIDKQSFTNIIDIYFCDGRK 506 (821)
Q Consensus 471 -~~~~~~~~a~~~~~~~~i~~~~f~~~l~~~p~~~~~ 506 (821)
.....|+.|.++|..+..+|+.+..++.+.|.+..-
T Consensus 89 ~~~FQVTitA~~~Cryl~W~R~kL~~~l~~~~~L~~v 125 (153)
T PF04831_consen 89 DDKFQVTITAEEDCRYLCWPREKLYLLLAKDPFLAAV 125 (153)
T ss_pred CCeEEEEEEEcCCcEEEEEEHHHHHHHHhhCHHHHHH
Confidence 345789999999999999999999999999876554
No 156
>KOG3827 consensus Inward rectifier K+ channel [Inorganic ion transport and metabolism]
Probab=97.08 E-value=0.0033 Score=64.34 Aligned_cols=100 Identities=15% Similarity=0.226 Sum_probs=68.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCCCCCC---CceeccccCCCCCcccccccchHHHHHHHHHHHHHHhhccccCcc
Q 003425 209 IVKLIAVELYCSHIAACIFYYLATTLPPEQEG---YTWIGSLKMGDYSYADFREIGFWKSYITSMYASVVTMTTVGYGDV 285 (821)
Q Consensus 209 ~~~~~~~~l~~~h~~ac~~~~i~~~~~~~~~~---~~w~~~~~~~~~~~~~~~~~~~~~~Y~~s~yw~~~t~tTvGyGdi 285 (821)
++.+...+++...+||++||.+++...+-... .+|.+=. .-...+..||-|++-|=||+|||--
T Consensus 66 lliF~~sf~~SWl~Fg~iwwlIA~~hGDL~~~~~~~~~tpCV-------------~nV~sf~sAFLFSiETQtTIGYG~R 132 (400)
T KOG3827|consen 66 LLIFSLSFVLSWLFFGVIWWLIAYAHGDLEPDPPGENHTPCV-------------MNVHSFTSAFLFSIETQTTIGYGFR 132 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCCcccCCCCcCCCcce-------------eeccchhhhheeeeeeeeeeecccc
Confidence 33344445555667999999999764432221 1222110 1123677899999999999999987
Q ss_pred ccCC--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 003425 286 HAVN--LREMVFIMIYVSFDMILGAYLIGNMTALIVKG 321 (821)
Q Consensus 286 ~p~t--~~e~~~~~~~~i~g~~~~a~~i~~i~~~~~~~ 321 (821)
.++. +...+..++=+++|+++-|+++|.+.+-+.+-
T Consensus 133 ~vTeeCP~aI~ll~~Q~I~g~ii~afm~G~i~aKiarP 170 (400)
T KOG3827|consen 133 YVTEECPEAIFLLVLQSILGVIINAFMVGAIFAKIARP 170 (400)
T ss_pred ccCccChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 6653 56666677778999999999999998877663
No 157
>KOG2301 consensus Voltage-gated Ca2+ channels, alpha1 subunits [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=97.03 E-value=0.008 Score=74.52 Aligned_cols=105 Identities=19% Similarity=0.198 Sum_probs=68.5
Q ss_pred eehhHHHHHHHHHHhHhheeeEEEEeCCceEEeeccHHHHHHHhhh-hhHHHHHhhhhHHHHHhhcCchhHHHHHHHHHH
Q 003425 105 LYVLDIVGQIAFLFDIVLQFCLAYRDSQTYRLICKRTPIALRYLRS-SFIIDLFSCMPWDLIYKASGRKEAVRYLLWIRL 183 (821)
Q Consensus 105 ~~~~~~~~~~~f~~Di~l~f~t~y~~~~~~~~v~~~~~I~~~Ylk~-~f~iDlis~lP~~~~~~~~~~~~~~~~l~llrl 183 (821)
+++.+.+...+|..|+.+.. .-.+| ..|+.+ |.++|.+-+. +.++.........+.+||.+|+
T Consensus 475 l~~~~~vF~~lF~~Em~~ki-----------~al~~----~~yF~~~~n~fD~~iv~-l~~~~~~~~~~~g~svLr~frl 538 (1592)
T KOG2301|consen 475 LYLGNVVFTGLFTVEMILKI-----------YALGP----RNYFRRGWNIFDLIIVL-LSLLELLLKNVYGLSVLRSFRL 538 (1592)
T ss_pred HHHHHHHHHHHHHHHHHHHH-----------HHcCc----HHHHhhhcchheEEEEe-hhhHHhcccchHHHHHHHHHHH
Confidence 56777888889999998854 23334 557666 6799988777 6555555455566778888888
Q ss_pred HHHHHHHHHHHhhhhhHh-hhHHHHHHHHHHHHHHHHHHHHHH
Q 003425 184 YRVRKVSQFFHKMEKDIR-INYMFSRIVKLIAVELYCSHIAAC 225 (821)
Q Consensus 184 ~rl~r~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~h~~ac 225 (821)
+|++|+.+....++.... +......+..+++++++++.++|.
T Consensus 539 lRIfkl~k~wp~l~~lv~~i~ns~~~l~~L~l~l~i~i~Ifa~ 581 (1592)
T KOG2301|consen 539 LRIFKLIKSWPTLNDLVKSIFNSGKALGNLVLFLFIFIFIFAA 581 (1592)
T ss_pred HHHHHHHHhhHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 888888877766665443 233444455555555555555443
No 158
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=96.98 E-value=0.0013 Score=68.91 Aligned_cols=72 Identities=29% Similarity=0.360 Sum_probs=59.2
Q ss_pred CHHHHHHHHHCCCCCCC------CCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHH
Q 003425 648 DSDLLKRVLSNGIDPNT------RDYDLRTPLHVAASEGLYLMAKLLVEAGASVFPKDRWGNTPLDEGRMCGNKNLIKLL 721 (821)
Q Consensus 648 ~~~~v~~Ll~~g~~~~~------~d~~g~T~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~i~~~L 721 (821)
-.+.+++|.+++++.|. .+..-.|+||+|+..|..++|.+||+.|+|+..+|..|.||..++. +.++-...
T Consensus 403 ~p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~Grtpy~ls~---nkdVk~~F 479 (591)
T KOG2505|consen 403 EPDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKDGAGRTPYSLSA---NKDVKSIF 479 (591)
T ss_pred chhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchhcccCCCCcccccc---cHHHHHHH
Confidence 35678888888776653 3445679999999999999999999999999999999999999887 55655555
Q ss_pred H
Q 003425 722 E 722 (821)
Q Consensus 722 l 722 (821)
+
T Consensus 480 ~ 480 (591)
T KOG2505|consen 480 I 480 (591)
T ss_pred H
Confidence 4
No 159
>PRK11832 putative DNA-binding transcriptional regulator; Provisional
Probab=96.91 E-value=0.0088 Score=57.23 Aligned_cols=98 Identities=9% Similarity=0.024 Sum_probs=77.3
Q ss_pred HHHHHHHhcccccccccCeE-EccCCccCeEEEEEeeEEEEEeeccCCccceEEEeCCCCccccccccccCCcceEEEEe
Q 003425 402 FINQIVIRLHEEFFLPGEVI-MEKGNVVDQLYFVCLGKLEEVGIEENGTEDYVSYLHPNSSFGEVSILCNIPQPYTVQVC 480 (821)
Q Consensus 402 ~l~~l~~~~~~~~~~~~e~I-~~~g~~~~~ly~I~~G~v~~~~~~~~g~~~~i~~l~~G~~fGe~~~~~~~~~~~~~~a~ 480 (821)
....+....++..+++|..+ +.+....+..|++.+|.+.+. ..+ ...+....+...||-...+.+....+..+|.
T Consensus 14 L~~~L~~~g~~~~~~~~~~~i~~~~~~~~~~~ll~~G~vsir--r~d--~ll~~t~~aP~IlGl~~~~~~~~~~~~l~ae 89 (207)
T PRK11832 14 LDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLR--REE--NVLIGITQAPYIMGLADGLMKNDIPYKLISE 89 (207)
T ss_pred HHHHhhccCCeEecCCCcEEeccccCCCceEEEEEeceEEEE--ecC--CeEEEeccCCeEeecccccCCCCceEEEEEc
Confidence 34556666777899999996 555555577999999999983 233 3567778888899977767666667899999
Q ss_pred cceEEEEechHhHHHHHHHhhhc
Q 003425 481 ELCRLLRIDKQSFTNIIDIYFCD 503 (821)
Q Consensus 481 ~~~~~~~i~~~~f~~~l~~~p~~ 503 (821)
++|+++.+|.++|.++++++.-+
T Consensus 90 ~~c~~~~i~~~~~~~iie~~~LW 112 (207)
T PRK11832 90 GNCTGYHLPAKQTITLIEQNQLW 112 (207)
T ss_pred CccEEEEeeHHHHHHHHHHhchH
Confidence 99999999999999999987633
No 160
>PLN03223 Polycystin cation channel protein; Provisional
Probab=96.70 E-value=0.093 Score=62.54 Aligned_cols=54 Identities=20% Similarity=0.229 Sum_probs=29.8
Q ss_pred CChhHHHHHHHHHHHHHHHhhhcceeee--------eecCCCcCeehhHHHHHHHHHHhHhh
Q 003425 69 DNRWYRAWTKFILIWAVYSSIFTPVEFG--------FFRGLSKNLYVLDIVGQIAFLFDIVL 122 (821)
Q Consensus 69 ~s~~~~~w~~~~~~~~~~~~~~~p~~~~--------f~~~~~~~~~~~~~~~~~~f~~Di~l 122 (821)
.+.+....+++++++++|.++--...+. +.......|.++|++..++.+.=|++
T Consensus 1171 ~DyfvLacEIIFVLFILYfIyrEIkEI~k~KK~RG~~laYFKSfWNwLEIl~IlLS~AAIvL 1232 (1634)
T PLN03223 1171 EDWVRFAMEILLAIGAVYSVYEEAMDFGSSKKTRGSYLAYFLSGWNYVDFASIGLHLATIMM 1232 (1634)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhhHhccchHHHHHHHHHHHHHHHHH
Confidence 3445666666666666666554332221 11123456778888776665555554
No 161
>KOG3614 consensus Ca2+/Mg2+-permeable cation channels (LTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=96.65 E-value=0.064 Score=63.85 Aligned_cols=88 Identities=10% Similarity=0.046 Sum_probs=46.4
Q ss_pred ChhHHHHHHHHHHHHHHHhhhcceeeeeecCCCcCeehhHHHHHHHHHHhHhheeeEEEEeCCceEEeeccHHHHHHHhh
Q 003425 70 NRWYRAWTKFILIWAVYSSIFTPVEFGFFRGLSKNLYVLDIVGQIAFLFDIVLQFCLAYRDSQTYRLICKRTPIALRYLR 149 (821)
Q Consensus 70 s~~~~~w~~~~~~~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~~f~~Di~l~f~t~y~~~~~~~~v~~~~~I~~~Ylk 149 (821)
++...+|-.+++.+.++.++...+.+-|....+ .+.++-++-.+.+++|.+=+.... +.. . =+++++..|-.
T Consensus 790 APIvkFw~~~l~yi~FL~lftYvlLv~~~~~Ps-~~Ew~~~~~iftl~~E~vRq~~~s---e~~-~---l~~kv~v~f~d 861 (1381)
T KOG3614|consen 790 APIVKFWLNVLSYIAFLLLFTYVLLVDFQPSPS-MWEWILFAWIFTLFLEEVRQIFIS---ESG-L---LPQKVRVYFAD 861 (1381)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHheeccCCCCC-ccchhHHHHHHHHHHHHHHHHhcC---CCc-c---hhhHHHHHHHH
Confidence 456677777666655555555555555544332 222222222233445544333222 221 1 14555555556
Q ss_pred hhhHHHHHhhhhHHHH
Q 003425 150 SSFIIDLFSCMPWDLI 165 (821)
Q Consensus 150 ~~f~iDlis~lP~~~~ 165 (821)
.|+.+|+++++-|.+-
T Consensus 862 ~wN~~d~~ai~~F~vG 877 (1381)
T KOG3614|consen 862 FWNLIDLLAILLFLVG 877 (1381)
T ss_pred HHHHHHHHHHHHHhhh
Confidence 6899999998876554
No 162
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=96.51 E-value=0.0029 Score=66.51 Aligned_cols=65 Identities=26% Similarity=0.353 Sum_probs=55.7
Q ss_pred cCCHHHHHHHHHcCCCCCC------CCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHH
Q 003425 549 HGDLYQLEGLIRAGADPNR------TDYDGRSPLHLAASRGYEEIMTFLIQKGVDINLKDNFGNTPLLEAI 613 (821)
Q Consensus 549 ~g~~~~v~~Ll~~g~~~n~------~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~tpL~~A~ 613 (821)
..-.+.+++|.+++++.|. .+..-.|+||+|+.+|..++|.+||+.|+|+..+|..|.||..++.
T Consensus 401 ~~~p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~Grtpy~ls~ 471 (591)
T KOG2505|consen 401 KPEPDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKDGAGRTPYSLSA 471 (591)
T ss_pred cCchhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchhcccCCCCcccccc
Confidence 3446778899988877653 3455679999999999999999999999999999999999998886
No 163
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=96.45 E-value=0.0049 Score=38.21 Aligned_cols=27 Identities=48% Similarity=0.722 Sum_probs=17.8
Q ss_pred CCcHHHHHHHcCcHHHHHHHHHcCCCC
Q 003425 669 LRTPLHVAASEGLYLMAKLLVEAGASV 695 (821)
Q Consensus 669 g~T~Lh~A~~~g~~~~v~~Ll~~ga~~ 695 (821)
|.||+|+|+..++.++++.|+++|.++
T Consensus 2 ~~~~l~~~~~~~~~~~~~~ll~~~~~~ 28 (30)
T smart00248 2 GRTPLHLAAENGNLEVVKLLLDKGADI 28 (30)
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 566666666666666666666666654
No 164
>KOG2301 consensus Voltage-gated Ca2+ channels, alpha1 subunits [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=96.41 E-value=0.071 Score=66.47 Aligned_cols=135 Identities=20% Similarity=0.138 Sum_probs=75.9
Q ss_pred HHHHHHHHHHHhhhcceeeeeecC---CCcCeehhHHHHHHHHHHhHhheeeEEEEeCCceEEeeccHHHHHHHhhh-hh
Q 003425 77 TKFILIWAVYSSIFTPVEFGFFRG---LSKNLYVLDIVGQIAFLFDIVLQFCLAYRDSQTYRLICKRTPIALRYLRS-SF 152 (821)
Q Consensus 77 ~~~~~~~~~~~~~~~p~~~~f~~~---~~~~~~~~~~~~~~~f~~Di~l~f~t~y~~~~~~~~v~~~~~I~~~Ylk~-~f 152 (821)
..+++..++.++...+..-....+ ....+.+.|++...+|+++++++. +..-- .-|+++ |.
T Consensus 843 ~~~I~~~illSs~ala~ed~~~~~~~~~~~~L~y~D~~Ft~iFt~Em~lK~------------ia~Gf---~~y~rn~w~ 907 (1592)
T KOG2301|consen 843 EAFILTVILISSLALAFEDVRGENRPTINGILEYADYIFTYIFTFEMLLKW------------IAYGF---FFYFRNAWN 907 (1592)
T ss_pred HHHHHHHHHHhhhcccccCcchhhchhhhhHHHHHHHHHHHHHHHHHHHHH------------HHhHH---HHHHhhHHh
Confidence 444555555555555444333222 234577899999999999999944 22211 228988 77
Q ss_pred HHHHHhhhhHHHHHhhcC-chhHHHHHHHHHHHHHHHHHHHHHhhhhhHh-hhHHHHHHHHHHHHHHHHHHHHHHH
Q 003425 153 IIDLFSCMPWDLIYKASG-RKEAVRYLLWIRLYRVRKVSQFFHKMEKDIR-INYMFSRIVKLIAVELYCSHIAACI 226 (821)
Q Consensus 153 ~iDlis~lP~~~~~~~~~-~~~~~~~l~llrl~rl~r~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~h~~ac~ 226 (821)
++|++...-..+.+.... ....++.||.+|.+|-+|....+..++.... +...+..+....+..+++..++||+
T Consensus 908 ~lDf~Vv~vslisl~~~~~~~~~ik~lr~lRaLRPLR~i~r~~~mr~Vv~~l~~a~~~I~nv~lV~li~~fiFai~ 983 (1592)
T KOG2301|consen 908 WLDFVVVIVSLISLIASLKILSLIKSLRILRALRPLRALSRFPGMRVVVLALFGGLPEIFNVLLVCLIFWFIFAIM 983 (1592)
T ss_pred hhhHHHhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999887665433322221 2445666666666666666666665443332 2233334444444444444455544
No 165
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=96.28 E-value=0.0072 Score=37.38 Aligned_cols=27 Identities=56% Similarity=0.972 Sum_probs=15.2
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCC
Q 003425 572 GRSPLHLAASRGYEEIMTFLIQKGVDI 598 (821)
Q Consensus 572 g~t~L~~A~~~g~~~~v~~Ll~~g~~~ 598 (821)
|.||+|+|+..++.++++.|+++|.++
T Consensus 2 ~~~~l~~~~~~~~~~~~~~ll~~~~~~ 28 (30)
T smart00248 2 GRTPLHLAAENGNLEVVKLLLDKGADI 28 (30)
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 455555555555555555555555443
No 166
>KOG3542 consensus cAMP-regulated guanine nucleotide exchange factor [Signal transduction mechanisms]
Probab=95.82 E-value=0.025 Score=61.59 Aligned_cols=111 Identities=16% Similarity=0.301 Sum_probs=85.3
Q ss_pred hhhhccccccccCCCHHHHHHHHHhcccccc-cccCeEEccCCccCeEEEEEeeEEEEEeeccCCccceEEEeCCCCccc
Q 003425 385 YLPYIEKVPLFKGCSSEFINQIVIRLHEEFF-LPGEVIMEKGNVVDQLYFVCLGKLEEVGIEENGTEDYVSYLHPNSSFG 463 (821)
Q Consensus 385 ~~~~l~~~~~f~~~~~~~l~~l~~~~~~~~~-~~~e~I~~~g~~~~~ly~I~~G~v~~~~~~~~g~~~~i~~l~~G~~fG 463 (821)
..++..+.|-|.+++-+..++|+..|....+ ..|.+|+..|+.-|..+.|+.|.|++.. ++|+. ..+.-|+.||
T Consensus 279 LLeFMhqlpAFAnmtMSvrReLC~vMvFaVVe~AGtivL~dgeeLDSWsVIlNG~VEv~~--PdGk~---e~l~mGnSFG 353 (1283)
T KOG3542|consen 279 LLEFMHQLPAFANMTMSVRRELCLVMVFAVVEDAGTIVLADGEELDSWSVILNGCVEVVK--PDGKR---EELKMGNSFG 353 (1283)
T ss_pred HHHHHHhchHhhcccHHHHHHHHHHHHHHHHhhcCeEEecCCcccceeEEEecceEEEec--CCCce---EEeecccccC
Confidence 3467778899999999999999999876644 6799999999999999999999999987 55654 3467799999
Q ss_pred cccccccCCcceEEE-EecceEEEEechHhHHHHHHHh
Q 003425 464 EVSILCNIPQPYTVQ-VCELCRLLRIDKQSFTNIIDIY 500 (821)
Q Consensus 464 e~~~~~~~~~~~~~~-a~~~~~~~~i~~~~f~~~l~~~ 500 (821)
...-...+-..-.++ -+.+|+..+|...+|-.++...
T Consensus 354 ~~PT~dkqym~G~mRTkVDDCqFVciaqqDycrIln~v 391 (1283)
T KOG3542|consen 354 AEPTPDKQYMIGEMRTKVDDCQFVCIAQQDYCRILNTV 391 (1283)
T ss_pred CCCCcchhhhhhhhheecccceEEEeehhhHHHHHHHH
Confidence 654333222111222 3678999999999998887654
No 167
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=95.80 E-value=0.049 Score=50.27 Aligned_cols=44 Identities=18% Similarity=0.226 Sum_probs=26.5
Q ss_pred HHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH
Q 003425 673 LHVAASEGLYLMAKLLVEAGASVFPKDRWGNTPLDEGRMCGNKNLIKLLE 722 (821)
Q Consensus 673 Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~i~~~Ll 722 (821)
|..|+..|....+.-.+++|.+++. ++|..|+..++..++.+++
T Consensus 147 l~~a~~kgll~F~letlkygg~~~~------~vls~Av~ynhRkIL~yfi 190 (192)
T PF03158_consen 147 LEKAAAKGLLPFVLETLKYGGNVDI------IVLSQAVKYNHRKILDYFI 190 (192)
T ss_pred HHHHHHCCCHHHHHHHHHcCCcccH------HHHHHHHHhhHHHHHHHhh
Confidence 4556666666666666666665542 4666666666666666554
No 168
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=95.79 E-value=0.06 Score=51.08 Aligned_cols=45 Identities=24% Similarity=0.225 Sum_probs=23.4
Q ss_pred HHHHHHHHHCC-CCCCC---CCCCCCcHHHHHHHcCcHHHHHHHHHcCC
Q 003425 649 SDLLKRVLSNG-IDPNT---RDYDLRTPLHVAASEGLYLMAKLLVEAGA 693 (821)
Q Consensus 649 ~~~v~~Ll~~g-~~~~~---~d~~g~T~Lh~A~~~g~~~~v~~Ll~~ga 693 (821)
..++++++++| +++|. +-+.|.|-|.-|+.+++.+++.+|+++||
T Consensus 230 ~kvL~~Fi~~Glv~vN~~F~~~NSGdtMLDNA~Ky~~~emi~~Llk~GA 278 (284)
T PF06128_consen 230 YKVLEYFINRGLVDVNKKFQKVNSGDTMLDNAMKYKNSEMIAFLLKYGA 278 (284)
T ss_pred HHHHHHHHhccccccchhhhccCCcchHHHhHHhcCcHHHHHHHHHcCc
Confidence 34555555555 34442 22345555555555555555555555555
No 169
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=95.47 E-value=0.074 Score=50.46 Aligned_cols=114 Identities=21% Similarity=0.216 Sum_probs=72.8
Q ss_pred HHHHHHcCChHHHHHHHhcCCCCCcccccchhhHHHhcCCHHHHHHHHHCCCCCCCCCC----CCCcHHHHHHH--cCcH
Q 003425 609 LLEAIKYGNDGAASLLVKEGASLNVEEAGSFLCTAVARGDSDLLKRVLSNGIDPNTRDY----DLRTPLHVAAS--EGLY 682 (821)
Q Consensus 609 L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~d~----~g~T~Lh~A~~--~g~~ 682 (821)
|--|+...+.+-+.-++.. ..+..+++-+|+.++..+++.+|+..- +...+|- .+.--+.++.. ..+.
T Consensus 157 ledAV~AsN~~~i~~~Vtd-----KkdA~~Am~~si~~~K~dva~~lls~f-~ft~~dv~~~~~~~ydieY~LS~h~a~~ 230 (284)
T PF06128_consen 157 LEDAVKASNYEEISNLVTD-----KKDAHQAMWLSIGNAKEDVALYLLSKF-NFTKQDVASMEKELYDIEYLLSEHSASY 230 (284)
T ss_pred HHHHHhhcCHHHHHHHhcc-----hHHHHHHHHHHhcccHHHHHHHHHhhc-ceecchhhhcCcchhhHHHHHhhcCCcH
Confidence 4455555555555544432 123445666677667777777776531 1111110 12222333332 3467
Q ss_pred HHHHHHHHcC-CCCCCC---CCCCCCHHHHHHHcCCHHHHHHHHhccccc
Q 003425 683 LMAKLLVEAG-ASVFPK---DRWGNTPLDEGRMCGNKNLIKLLEDAKSTQ 728 (821)
Q Consensus 683 ~~v~~Ll~~g-a~~~~~---d~~g~t~l~~A~~~~~~~i~~~Ll~~~a~~ 728 (821)
.++++.+++| +++|.+ -+.|.|-|+-|.+.++.+++..|+++||-.
T Consensus 231 kvL~~Fi~~Glv~vN~~F~~~NSGdtMLDNA~Ky~~~emi~~Llk~GA~~ 280 (284)
T PF06128_consen 231 KVLEYFINRGLVDVNKKFQKVNSGDTMLDNAMKYKNSEMIAFLLKYGAIS 280 (284)
T ss_pred HHHHHHHhccccccchhhhccCCcchHHHhHHhcCcHHHHHHHHHcCccc
Confidence 8899999998 677753 577999999999999999999999999853
No 170
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=95.22 E-value=0.22 Score=46.11 Aligned_cols=137 Identities=16% Similarity=0.085 Sum_probs=96.5
Q ss_pred hhhHHHHhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCChH
Q 003425 540 ALKVNSAAYHGDLYQLEGLIRAGADPNRTDYDGRSPLHLAASRGYEEIMTFLIQKGVDINLKDNFGNTPLLEAIKYGNDG 619 (821)
Q Consensus 540 ~~~L~~A~~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~tpL~~A~~~~~~~ 619 (821)
..-+..|++.+-+++++..-+...+- -...++..-.||+..+.++|+|+-+. ....+ -.+-...|....+.+
T Consensus 47 ~CLl~HAVk~nmL~ILqkyke~L~~~---~~~~q~LFElAC~~qkydiV~WI~qn---L~i~~--~~~iFdIA~~~kDls 118 (192)
T PF03158_consen 47 WCLLYHAVKYNMLSILQKYKEDLENE---RYLNQELFELACEEQKYDIVKWIGQN---LHIYN--PEDIFDIAFAKKDLS 118 (192)
T ss_pred HHHHHHHHHcCcHHHHHHHHHHhhcc---hhHHHHHHHHHHHHccccHHHHHhhc---cCCCC--chhhhhhhhhccchh
Confidence 45577899999999998886653321 13456788899999999999999433 22222 235567788888777
Q ss_pred HHH----HHHhcCCCCCcccc----cchhhHHHhcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHH
Q 003425 620 AAS----LLVKEGASLNVEEA----GSFLCTAVARGDSDLLKRVLSNGIDPNTRDYDLRTPLHVAASEGLYLMAKLLVE 690 (821)
Q Consensus 620 ~v~----~Ll~~~~~~~~~~~----~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~ 690 (821)
+.. ++.++..+-...+- ..-|..|+..|-...+...+++|.+++. ++|..|+.+++..++.+++.
T Consensus 119 LyslGY~l~~~~~~~~~~~d~~~ll~~hl~~a~~kgll~F~letlkygg~~~~------~vls~Av~ynhRkIL~yfi~ 191 (192)
T PF03158_consen 119 LYSLGYKLLFNRMMSEHNEDPTSLLTQHLEKAAAKGLLPFVLETLKYGGNVDI------IVLSQAVKYNHRKILDYFIR 191 (192)
T ss_pred HHHHHHHHHHhhcccccccCHHHHHHHHHHHHHHCCCHHHHHHHHHcCCcccH------HHHHHHHHhhHHHHHHHhhc
Confidence 632 23333222211111 1347889999999999999999988754 89999999999999998874
No 171
>KOG1418 consensus Tandem pore domain K+ channel [Inorganic ion transport and metabolism]
Probab=94.41 E-value=0.0083 Score=66.93 Aligned_cols=47 Identities=26% Similarity=0.508 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHHhhccccCccccCChhHH--------HHHHHHHHHHHHHHHHHH
Q 003425 265 SYITSMYASVVTMTTVGYGDVHAVNLREM--------VFIMIYVSFDMILGAYLI 311 (821)
Q Consensus 265 ~Y~~s~yw~~~t~tTvGyGdi~p~t~~e~--------~~~~~~~i~g~~~~a~~i 311 (821)
.|+.|+||+++++|||||||++|.+...+ .+..++.++|...++.+.
T Consensus 242 ~f~~~~Yf~fisltTIG~GD~vp~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 296 (433)
T KOG1418|consen 242 SFIEAFYFSFISLTTIGFGDIVPRTLLGRFRREELVDPLASVWILSGLALLALVL 296 (433)
T ss_pred eeEeeeeEEEEEeeeecCCccccCCCcceeeccccccchhHHHHHhhhhHHHHHh
Confidence 47789999999999999999999998866 577778888888887776
No 172
>KOG3542 consensus cAMP-regulated guanine nucleotide exchange factor [Signal transduction mechanisms]
Probab=93.04 E-value=0.12 Score=56.60 Aligned_cols=104 Identities=13% Similarity=0.176 Sum_probs=79.0
Q ss_pred cHHHHHHHHHhhhhhhccccccccCCCHHHHHHHHHhcccccccccCeEEccCCccCeEEEEEeeEEEEEeeccCCccce
Q 003425 373 PISIRAKISQTLYLPYIEKVPLFKGCSSEFINQIVIRLHEEFFLPGEVIMEKGNVVDQLYFVCLGKLEEVGIEENGTEDY 452 (821)
Q Consensus 373 p~~L~~~i~~~~~~~~l~~~~~f~~~~~~~l~~l~~~~~~~~~~~~e~I~~~g~~~~~ly~I~~G~v~~~~~~~~g~~~~ 452 (821)
|+.|+......--...+.+...|+++-...+..++...+...++.+.++|+.|+.+...|++++|.|-+.. .
T Consensus 23 ~~~~~t~~~~rN~~~~lh~ld~~snl~~~~lk~l~~~aryer~~g~~ilf~~~~var~wyillsgsv~v~g-----q--- 94 (1283)
T KOG3542|consen 23 PPHLRTPDDIRNVYEQLHQLDTFSNLFIGPLKALCKTARYERHPGQYILFRDGDVARSWYILLSGSVFVEG-----Q--- 94 (1283)
T ss_pred CcccCChhhhhhHHHHHhhhhhhhhhhhhhHHHhhhhhhhhcCCCceEEecccchhhheeeeeccceEeec-----c---
Confidence 44444433333333456677888899899999999999999999999999999999999999999976542 1
Q ss_pred EEEeCCCCccccccccccCCcceEEEEecceEEEEec
Q 003425 453 VSYLHPNSSFGEVSILCNIPQPYTVQVCELCRLLRID 489 (821)
Q Consensus 453 i~~l~~G~~fGe~~~~~~~~~~~~~~a~~~~~~~~i~ 489 (821)
..-|-.+||-. +|..|..++-.++++++++++
T Consensus 95 --i~mp~~~fgkr---~g~~r~~nclllq~semivid 126 (1283)
T KOG3542|consen 95 --IYMPYGCFGKR---TGQNRTHNCLLLQESEMIVID 126 (1283)
T ss_pred --eecCccccccc---cccccccceeeecccceeeee
Confidence 23455667754 367788888889999988883
No 173
>KOG0498 consensus K+-channel ERG and related proteins, contain PAS/PAC sensor domain [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=91.98 E-value=16 Score=42.58 Aligned_cols=45 Identities=13% Similarity=0.268 Sum_probs=36.2
Q ss_pred HhhCcHHHHHHHHHhhhhhhcc-----ccccccCCCHHHHHHHHHhcccc
Q 003425 369 LQDIPISIRAKISQTLYLPYIE-----KVPLFKGCSSEFINQIVIRLHEE 413 (821)
Q Consensus 369 l~~lp~~L~~~i~~~~~~~~l~-----~~~~f~~~~~~~l~~l~~~~~~~ 413 (821)
..+||+.||+.|..+...++.. .-.+++++|++...+|..++-..
T Consensus 370 ~~~LP~~LRqRi~~y~q~kw~~t~Gvdee~lL~~LP~~LR~dI~~hL~~~ 419 (727)
T KOG0498|consen 370 RRQLPPDLRQRIRRYEQYKWLATRGVDEEELLQSLPKDLRRDIKRHLCLD 419 (727)
T ss_pred hccCCHHHHHHHHHHHHHHHhhccCcCHHHHHHhCCHHHHHHHHHHHhHH
Confidence 3579999999999988777654 34688999999999998887443
No 174
>KOG2302 consensus T-type voltage-gated Ca2+ channel, pore-forming alpha1I subunit [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=91.91 E-value=4.3 Score=47.16 Aligned_cols=74 Identities=15% Similarity=0.067 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHhhhcceeeeee-----cCCCcCeehhHHHHHHHHHHhHhheeeE-EEEeCCceEEeeccHHHHHHHhh
Q 003425 76 WTKFILIWAVYSSIFTPVEFGFF-----RGLSKNLYVLDIVGQIAFLFDIVLQFCL-AYRDSQTYRLICKRTPIALRYLR 149 (821)
Q Consensus 76 w~~~~~~~~~~~~~~~p~~~~f~-----~~~~~~~~~~~~~~~~~f~~Di~l~f~t-~y~~~~~~~~v~~~~~I~~~Ylk 149 (821)
++.+-++.++++++..-.+-.-. ++-...+..+|-++.++|.+++++++.. |.+.+ +-|+-
T Consensus 81 fe~vsmlvillncvtlgmfrpced~~c~s~rc~ilqafddfifaffavemv~kmvalgifgk-------------kcylg 147 (1956)
T KOG2302|consen 81 FECVSMLVILLNCVTLGMFRPCEDMDCLSDRCKILQAFDDFIFAFFAVEMVLKMVALGIFGK-------------KCYLG 147 (1956)
T ss_pred HHHHHHHHHHHhhhhhcccccchhcccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccc-------------ccccc
Confidence 35555556666666554332111 1223447789999999999999997632 22211 45775
Q ss_pred h-hhHHHHHhhhhH
Q 003425 150 S-SFIIDLFSCMPW 162 (821)
Q Consensus 150 ~-~f~iDlis~lP~ 162 (821)
. |.-+|++.++.=
T Consensus 148 dtwnrldffiv~ag 161 (1956)
T KOG2302|consen 148 DTWNRLDFFIVMAG 161 (1956)
T ss_pred Cchhhhhhhheehh
Confidence 4 777887766553
No 175
>PF08016 PKD_channel: Polycystin cation channel; InterPro: IPR013122 Polycystic kidney diseases (PKD) are disorders characterised by large numbers of cysts distributed throughout grossly-enlarged kidneys. Cyst development is associated with impairment of kidney function, and ultimately kidney failure and death []. Most cases of autosomal dominant PKD result from mutations in the PKD1 gene that cause premature protein termination. A second gene for autosomal dominant polycystic kidney disease has been identified by positional cloning []. The predicted 968-amino acid sequence of the PKD2 gene product (polycystin-2) contains 6 transmembrane domains, with intracellular N- and C-termini. Polycystin-2 shares some similarity with the family of voltage-activated calcium (and sodium) channels, and contains a potential calcium-binding domain. Polycystin-2 is strongly expressed in ovary, foetal and adult kidney, testis, and small intestine. Polycystin-1 requires the presence of this protein for stable expression and is believed to interact with it via its C terminus. All mutations between exons 1 and 11 result in a truncated polycystin-2 that lacks a calcium-binding EF-hand domain and the cytoplasmic domains required for the interaction of polycystin-2 with polycystin-1 []. PKD2, although clinically milder than PKD1, has a deleterious impact on life expectancy. This entry contains proteins belonging to the polycystin family including Mucolipin and Polycystin-1 and -2 (PKD1 and PKD2). The domain contains the cation channel region of PKD1 and PKD2 proteins. PKD1 and PKD2 may function through a common signalling pathway that is necessary for normal tubulogenesis. The PKD2 gene product has six transmembrane spans with intracellular amino- and carboxyl-termini []. Mucolipin is a cationic channel which probably plays a role in the endocytic pathway and in the control of membrane trafficking of proteins and lipids. It could play a major role in the calcium ion transport regulating lysosomal exocytosis [, , ].
Probab=90.30 E-value=5.4 Score=44.21 Aligned_cols=18 Identities=17% Similarity=0.248 Sum_probs=13.4
Q ss_pred HHHHhhh-hhHHHHHhhhh
Q 003425 144 ALRYLRS-SFIIDLFSCMP 161 (821)
Q Consensus 144 ~~~Ylk~-~f~iDlis~lP 161 (821)
.++|+++ |.++|++.++-
T Consensus 236 g~~y~~~~WN~~e~~ii~l 254 (425)
T PF08016_consen 236 GRAYFKSFWNWLELLIILL 254 (425)
T ss_pred hhHHhhhcCcHHHHHHHHH
Confidence 3688888 77999877654
No 176
>KOG3599 consensus Ca2+-modulated nonselective cation channel polycystin [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=90.26 E-value=12 Score=44.24 Aligned_cols=38 Identities=13% Similarity=0.208 Sum_probs=20.4
Q ss_pred CccccCC--hhHHHHHHHHHHHHHHHHHHHHHH-HHHHHhc
Q 003425 283 GDVHAVN--LREMVFIMIYVSFDMILGAYLIGN-MTALIVK 320 (821)
Q Consensus 283 Gdi~p~t--~~e~~~~~~~~i~g~~~~a~~i~~-i~~~~~~ 320 (821)
||..|.+ ...+++++++..+-+++.+++.-+ +.+++..
T Consensus 637 G~~~~~~i~~~~r~LG~~~~~~~v~~v~~illnmF~aiI~~ 677 (798)
T KOG3599|consen 637 GDFCPAEIFHANRILGPLLFLTYVFVVSFILLNLFVAIIND 677 (798)
T ss_pred ccCCccccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5666653 345566666555555555544444 4555544
No 177
>PF00520 Ion_trans: Ion transport protein calcium channel signature potassium channel signature sodium channel signature; InterPro: IPR005821 This group of proteins is found in sodium, potassium, and calcium ion channels proteins. The proteins have 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some Na channels proteins the domain is repeated four times, whereas in others (e.g. K channels) the protein forms a tetramer in the membrane. A bacterial structure of the protein is known for the last two helices but is not included in the Pfam family due to it lacking the first four helices. ; GO: 0005216 ion channel activity, 0006811 ion transport, 0055085 transmembrane transport, 0016020 membrane; PDB: 3VMX_B 1QG9_A 1UJL_A 2LE7_A 2LCM_A 3A2A_A 3RW0_A 4EKW_A 3RVY_B 3RVZ_B ....
Probab=87.68 E-value=4.5 Score=38.99 Aligned_cols=59 Identities=15% Similarity=0.148 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHh-hhhhHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Q 003425 175 VRYLLWIRLYRVRKVSQFFHK-MEKDIRINYMFSRIVKLIAVELYCSHIAACIFYYLATT 233 (821)
Q Consensus 175 ~~~l~llrl~rl~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~h~~ac~~~~i~~~ 233 (821)
.+.+|++|++|+.|..+.++. +....+......++..++...++...+.++..+.-...
T Consensus 65 ~~~l~~~R~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~a~~~~~lf~~~~~ 124 (200)
T PF00520_consen 65 FRLLRLLRLLRLLRRFRSLRRLLRALIRSFPDLFKFILLLFIVLLFFACIGYQLFGGSDN 124 (200)
T ss_dssp HHHHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTS-
T ss_pred EEeeccccccccccccccccccccccccccccccccccccccccccccchhheecccccc
Confidence 344444455555444442222 22333444455677778788877778888888776643
No 178
>PLN03223 Polycystin cation channel protein; Provisional
Probab=87.31 E-value=27 Score=43.03 Aligned_cols=17 Identities=29% Similarity=0.176 Sum_probs=13.3
Q ss_pred HHHhhh-hhHHHHHhhhh
Q 003425 145 LRYLRS-SFIIDLFSCMP 161 (821)
Q Consensus 145 ~~Ylk~-~f~iDlis~lP 161 (821)
+.|+++ |-|+|++.++-
T Consensus 1208 laYFKSfWNwLEIl~IlL 1225 (1634)
T PLN03223 1208 LAYFLSGWNYVDFASIGL 1225 (1634)
T ss_pred hhHhccchHHHHHHHHHH
Confidence 689998 88999966443
No 179
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=82.69 E-value=2.3 Score=33.94 Aligned_cols=46 Identities=20% Similarity=0.312 Sum_probs=27.5
Q ss_pred hHHHHhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHc
Q 003425 542 KVNSAAYHGDLYQLEGLIRAGADPNRTDYDGRSPLHLAASRGYEEIMTFLIQK 594 (821)
Q Consensus 542 ~L~~A~~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ 594 (821)
-+..|+..|+.|+++.+++.+ .++ ..++..|+...+-+++++|++.
T Consensus 9 tl~~Ai~GGN~eII~~c~~~~-~~~------~~~l~~AI~~H~n~i~~~l~~~ 54 (76)
T PF11929_consen 9 TLEYAIIGGNFEIINICLKKN-KPD------NDCLEYAIKSHNNEIADWLIEN 54 (76)
T ss_pred HHHHHHhCCCHHHHHHHHHHh-ccH------HHHHHHHHHHhhHHHHHHHHHh
Confidence 355666666666666666543 111 3456666666666666666664
No 180
>cd06537 CIDE_N_B CIDE_N domain of CIDE-B proteins. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins. These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40, ICAD/DFF45 and CIDE nucleases during apoptosis. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, CIDE proteins were initially characterized as mitochondrial activators of apoptosis. However, strong metabolic phenotypes of mice lacking CIDE-A and CIDE-B indicated that this family may play critical roles in energy balance.
Probab=81.14 E-value=4.6 Score=32.09 Aligned_cols=50 Identities=20% Similarity=0.409 Sum_probs=40.4
Q ss_pred EcCccHHHHHHHHHhHcCCCCCcc-cccCCCceeee---eeeeecCCeEEEeec
Q 003425 770 WIPQNIKDLIKTAAEQLDFRGGDC-ILSSEGGKILD---VDMINDDQKLYLIQE 819 (821)
Q Consensus 770 ~lp~~~~~l~~~~~~~~~~~~~~~-~~~~~g~~~~~---~~~~r~~~~~~~~~~ 819 (821)
..-.+++||+..+.+.+..+.+.+ ++.+||-++++ +...-||..+.++..
T Consensus 18 V~A~sL~EL~~K~~~~L~~~~~~~lvLeeDGT~Vd~EeyF~tLpdnT~lm~L~~ 71 (81)
T cd06537 18 LTAASLQELLAKALETLLLSGVLTLVLEEDGTAVDSEDFFELLEDDTCLMVLEQ 71 (81)
T ss_pred EEccCHHHHHHHHHHHhCCCCceEEEEecCCCEEccHHHHhhCCCCCEEEEECC
Confidence 345789999999999999976544 48889999966 778888988888764
No 181
>PF00060 Lig_chan: Ligand-gated ion channel; InterPro: IPR001320 The ability of synapses to modify their synaptic strength in response to activity is a fundamental property of the nervous system and may be an essential component of learning and memory. There are three classes of ionotropic glutamate receptor, namely NMDA (N-methyl-D-aspartate), AMPA (alpha-amino-3-hydroxy-5-methyl-4-isoxazole-4-propionic acid) and kainate receptors. They are believed to play critical roles in synaptic plasticity. At many synapses in the brain, transient activation of NMDA receptors leads to a persistent modification in the strength of synaptic transmission mediated by AMPA receptors and kainate receptors can act as the induction trigger for long-term changes in synaptic transmission [].; GO: 0004970 ionotropic glutamate receptor activity, 0005234 extracellular-glutamate-gated ion channel activity, 0016020 membrane; PDB: 3FAT_A 3KFM_A 3KEI_A 3EN3_A 3EPE_B 3FAS_A 2F34_A 3C34_B 3S2V_A 3GBB_B ....
Probab=81.04 E-value=2.3 Score=39.05 Aligned_cols=57 Identities=16% Similarity=0.204 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHHHHhhccccCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 003425 263 WKSYITSMYASVVTMTTVGYGDVHAVNLREMVFIMIYVSFDMILGAYLIGNMTALIVK 320 (821)
Q Consensus 263 ~~~Y~~s~yw~~~t~tTvGyGdi~p~t~~e~~~~~~~~i~g~~~~a~~i~~i~~~~~~ 320 (821)
......++|+++.+++. +-++..|.+...|++.+++.++++++.+.-.+++++.+..
T Consensus 42 ~~~~~~~~~~~~~~~~~-q~~~~~~~s~s~Ril~~~w~l~~lil~~~Yta~L~s~Lt~ 98 (148)
T PF00060_consen 42 RFSLSNSFWYTFGTLLQ-QGSSIRPRSWSGRILLAFWWLFSLILIASYTANLTSFLTV 98 (148)
T ss_dssp HHHHHHHHHHCCCCCHH-HHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred cccHHHHHHHHHHhhcc-ccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 44677888888888776 4478999999999999999999999999999999998755
No 182
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=79.45 E-value=2.7 Score=33.48 Aligned_cols=47 Identities=21% Similarity=0.270 Sum_probs=32.6
Q ss_pred chhhHHHhcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHc
Q 003425 638 SFLCTAVARGDSDLLKRVLSNGIDPNTRDYDLRTPLHVAASEGLYLMAKLLVEA 691 (821)
Q Consensus 638 t~l~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~ 691 (821)
..+..|+..|+.++++.+++.+ .++ ...+..|+...+.+++++|++.
T Consensus 8 ~tl~~Ai~GGN~eII~~c~~~~-~~~------~~~l~~AI~~H~n~i~~~l~~~ 54 (76)
T PF11929_consen 8 KTLEYAIIGGNFEIINICLKKN-KPD------NDCLEYAIKSHNNEIADWLIEN 54 (76)
T ss_pred HHHHHHHhCCCHHHHHHHHHHh-ccH------HHHHHHHHHHhhHHHHHHHHHh
Confidence 4567777788888887777654 221 3467777777777888877775
No 183
>KOG4440 consensus NMDA selective glutamate-gated ion channel receptor subunit GRIN1 [Inorganic ion transport and metabolism; Amino acid transport and metabolism; Signal transduction mechanisms]
Probab=78.75 E-value=5.1 Score=44.17 Aligned_cols=93 Identities=22% Similarity=0.246 Sum_probs=68.2
Q ss_pred HHHHHHHHHHHHHHHHHccCCCCCCCCceeccccCCCCCcccccccchHHHHHHHHHHHHHHhhccccCccccCChhHHH
Q 003425 215 VELYCSHIAACIFYYLATTLPPEQEGYTWIGSLKMGDYSYADFREIGFWKSYITSMYASVVTMTTVGYGDVHAVNLREMV 294 (821)
Q Consensus 215 ~~l~~~h~~ac~~~~i~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~Y~~s~yw~~~t~tTvGyGdi~p~t~~e~~ 294 (821)
.+++..|+.|.+.|.+-...+.+.... .+ .-++.+-.-..-.++||+...+..-|-|.-+|.+-.-++
T Consensus 575 lv~~SVhvVal~lYlLDrfSPFgRFk~--------~d----s~~~ee~alnlssAmWF~WGVLLNSGigEgtPRSfSARv 642 (993)
T KOG4440|consen 575 LVGLSVHVVALMLYLLDRFSPFGRFKV--------ND----SEEEEEDALNLSSAMWFSWGVLLNSGIGEGTPRSFSARV 642 (993)
T ss_pred HHHHHHHHHHHHHHHHHhcCcccceee--------cc----CccchhhhcchhhhHHHHhHhhhccccCCCCCcchhHHH
Confidence 345668999999999887655433110 00 001111123466899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh
Q 003425 295 FIMIYVSFDMILGAYLIGNMTALIV 319 (821)
Q Consensus 295 ~~~~~~i~g~~~~a~~i~~i~~~~~ 319 (821)
+.+++.=+.+++.|--.+++++.+.
T Consensus 643 LGmVWaGFaMIiVASYTANLAAFLV 667 (993)
T KOG4440|consen 643 LGMVWAGFAMIIVASYTANLAAFLV 667 (993)
T ss_pred HHHHHhhhheeeehhhhhhhhhhee
Confidence 9999998888888888888887654
No 184
>KOG1053 consensus Glutamate-gated NMDA-type ion channel receptor subunit GRIN2A and related subunits [Inorganic ion transport and metabolism; Amino acid transport and metabolism; Signal transduction mechanisms]
Probab=78.24 E-value=37 Score=39.71 Aligned_cols=47 Identities=15% Similarity=0.265 Sum_probs=35.6
Q ss_pred HHHHHHHhhccccCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003425 270 MYASVVTMTTVGYGDVHAVNLREMVFIMIYVSFDMILGAYLIGNMTALI 318 (821)
Q Consensus 270 ~yw~~~t~tTvGyGdi~p~t~~e~~~~~~~~i~g~~~~a~~i~~i~~~~ 318 (821)
+-|+++-=-||- --.|..+..++.+.++.++++++.|.-.+|+++.+
T Consensus 616 llwaLvFnnsVp--v~nPKgtTskiMv~VWAfFavifLAsYTANLAAfM 662 (1258)
T KOG1053|consen 616 LLWALVFNNSVP--VENPKGTTSKIMVLVWAFFAVIFLASYTANLAAFM 662 (1258)
T ss_pred HHHHHHhCCCcC--CCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 346665433432 34567788999999999999999999999997754
No 185
>COG4709 Predicted membrane protein [Function unknown]
Probab=78.12 E-value=13 Score=34.76 Aligned_cols=74 Identities=22% Similarity=0.327 Sum_probs=57.1
Q ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhhc----cccHHHHHhhC--cHHHHHHHHHhhhhhhccccccccCCCHHH
Q 003425 329 DKMTDLMKYINRNRLGRDIRDQIIGHLRLQYES----SYTEASVLQDI--PISIRAKISQTLYLPYIEKVPLFKGCSSEF 402 (821)
Q Consensus 329 ~~~~~~~~~m~~~~lp~~l~~ri~~y~~~~~~~----~~~~~~~l~~l--p~~L~~~i~~~~~~~~l~~~~~f~~~~~~~ 402 (821)
+-++++++|++ ++|+..++.+..||+-++.+ +.+|+++.++| |.++-.|+....-.+..+.-|-+++.+...
T Consensus 5 efL~eL~~yL~--~Lp~~~r~e~m~dyeehF~~a~~~GksE~EI~~~LG~P~eiA~ei~s~~~~k~~~~~~~~~n~~~ai 82 (195)
T COG4709 5 EFLNELEQYLE--GLPREERREIMYDYEEHFREAQEAGKSEEEIAKDLGDPKEIAAEILSERGIKKEEVKPTQKNVRRAI 82 (195)
T ss_pred HHHHHHHHHHH--hCCHHHHHHHHHHHHHHHHhhhhcCCCHHHHHHHhCCHHHHHHHHHHHccchHHhccCcccchHHHH
Confidence 44667777776 59999999999998887754 46799999998 889999988887777777667776665544
Q ss_pred HH
Q 003425 403 IN 404 (821)
Q Consensus 403 l~ 404 (821)
+.
T Consensus 83 i~ 84 (195)
T COG4709 83 IA 84 (195)
T ss_pred HH
Confidence 33
No 186
>cd01615 CIDE_N CIDE_N domain, found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins, as well as CAD nuclease (caspase-activated DNase/DNA fragmentation factor, DFF40) and its inhibitor, ICAD(DFF45). These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of ICAD/DFF45, and the CAD/DFF40 and CIDE nucleases during apoptosis. The CIDE-N domain is also found in the FSP27/CIDE-C protein.
Probab=76.62 E-value=6.6 Score=31.18 Aligned_cols=49 Identities=20% Similarity=0.445 Sum_probs=38.3
Q ss_pred cCccHHHHHHHHHhHcCCCC-C-cccccCCCceeee---eeeeecCCeEEEeec
Q 003425 771 IPQNIKDLIKTAAEQLDFRG-G-DCILSSEGGKILD---VDMINDDQKLYLIQE 819 (821)
Q Consensus 771 lp~~~~~l~~~~~~~~~~~~-~-~~~~~~~g~~~~~---~~~~r~~~~~~~~~~ 819 (821)
.-.+++||+..+.++|+.+. + .-++.+||-++++ +...-||..+.++..
T Consensus 19 ~A~sL~eL~~K~~~~l~l~~~~~~lvL~eDGTeVddEeYF~tLp~nT~l~~l~~ 72 (78)
T cd01615 19 AASSLEELLSKACEKLKLPSAPVTLVLEEDGTEVDDEEYFQTLPDNTVLMLLEP 72 (78)
T ss_pred EcCCHHHHHHHHHHHcCCCCCCeEEEEeCCCcEEccHHHHhcCCCCcEEEEECC
Confidence 45789999999999999932 2 3458899999966 777788887777654
No 187
>KOG3713 consensus Voltage-gated K+ channel KCNB/KCNC [Inorganic ion transport and metabolism]
Probab=74.91 E-value=12 Score=40.67 Aligned_cols=20 Identities=20% Similarity=0.649 Sum_probs=12.9
Q ss_pred CeehhHHHHHHHHHHhHhhe
Q 003425 104 NLYVLDIVGQIAFLFDIVLQ 123 (821)
Q Consensus 104 ~~~~~~~~~~~~f~~Di~l~ 123 (821)
.+.++|++..+-|.+++++.
T Consensus 274 pLNIIDllAIlPFYielll~ 293 (477)
T KOG3713|consen 274 PLNIIDLLAILPFYLELLLT 293 (477)
T ss_pred cchHHHHHHHHHHHHHHHHH
Confidence 35566666666666666664
No 188
>cd06539 CIDE_N_A CIDE_N domain of CIDE-A proteins. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins. These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40, ICAD/DFF45, and CIDE nucleases during apoptosis. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, the CIDE proteins were initially characterized as mitochondrial activators of apoptosis. However, strong metabolic phenotypes of mice lacking CIDE-A and CIDE-B indicated that this family may play critical roles in energy balance.
Probab=74.25 E-value=8.6 Score=30.42 Aligned_cols=49 Identities=12% Similarity=0.355 Sum_probs=39.5
Q ss_pred cCccHHHHHHHHHhHcCCCC--CcccccCCCceeee---eeeeecCCeEEEeec
Q 003425 771 IPQNIKDLIKTAAEQLDFRG--GDCILSSEGGKILD---VDMINDDQKLYLIQE 819 (821)
Q Consensus 771 lp~~~~~l~~~~~~~~~~~~--~~~~~~~~g~~~~~---~~~~r~~~~~~~~~~ 819 (821)
.-.+++||...+.++|+.+. ..-++.+||-++++ +...-||..+.++..
T Consensus 19 ~A~sL~EL~~K~~~~l~~~~~~~~lvL~eDGT~Vd~EeyF~~LpdnT~lm~L~~ 72 (78)
T cd06539 19 MASSLQELISKTLDALVITSGLVTLVLEEDGTVVDTEEFFQTLGDNTHFMVLEK 72 (78)
T ss_pred EecCHHHHHHHHHHHhCCCCCCcEEEEeCCCCEEccHHHHhhCCCCCEEEEECC
Confidence 34789999999999999853 24558899999966 778888888887764
No 189
>PF08006 DUF1700: Protein of unknown function (DUF1700); InterPro: IPR012963 This family contains many hypothetical bacterial proteins and two putative membrane proteins (Q6GFD0 from SWISSPROT and Q6G806 from SWISSPROT).
Probab=69.15 E-value=23 Score=33.83 Aligned_cols=55 Identities=18% Similarity=0.431 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhhc----cccHHHHHhhC--cHHHHHHHHHhh
Q 003425 328 RDKMTDLMKYINRNRLGRDIRDQIIGHLRLQYES----SYTEASVLQDI--PISIRAKISQTL 384 (821)
Q Consensus 328 ~~~~~~~~~~m~~~~lp~~l~~ri~~y~~~~~~~----~~~~~~~l~~l--p~~L~~~i~~~~ 384 (821)
++=+++++++++ ++|++-++.+.+||+-++.. +.+|+++.++| |.++-+++..+.
T Consensus 4 ~efL~~L~~~L~--~lp~~e~~e~l~~Y~e~f~d~~~~G~sEeeii~~LG~P~~iA~~i~~~~ 64 (181)
T PF08006_consen 4 NEFLNELEKYLK--KLPEEEREEILEYYEEYFDDAGEEGKSEEEIIAELGSPKEIAREILAEY 64 (181)
T ss_pred HHHHHHHHHHHH--cCCHHHHHHHHHHHHHHHHHhhhCCCCHHHHHHHcCCHHHHHHHHHHhh
Confidence 344667778886 59999999999999988753 56799999998 777877776554
No 190
>PF07883 Cupin_2: Cupin domain; InterPro: IPR013096 This family represents the conserved barrel domain of the cupin superfamily [] (cupa is the Latin term for a small barrel). ; PDB: 2OPK_C 3BU7_B 2PHD_D 3NVC_A 3NKT_A 3NJZ_A 3NW4_A 3NST_A 3NL1_A 2H0V_A ....
Probab=68.97 E-value=10 Score=29.37 Aligned_cols=67 Identities=18% Similarity=0.201 Sum_probs=39.2
Q ss_pred ccccccCeEEccCCccC-eEEEEEeeEEEEEeeccCCccceEEEeCCCCccccccccccCCcceEEEEecceEEEEe
Q 003425 413 EFFLPGEVIMEKGNVVD-QLYFVCLGKLEEVGIEENGTEDYVSYLHPNSSFGEVSILCNIPQPYTVQVCELCRLLRI 488 (821)
Q Consensus 413 ~~~~~~e~I~~~g~~~~-~ly~I~~G~v~~~~~~~~g~~~~i~~l~~G~~fGe~~~~~~~~~~~~~~a~~~~~~~~i 488 (821)
..++||+..-..-.... .+++|++|++.+.. +|+ ...+++||.+=- =.+.+.......-+++.++.|
T Consensus 3 ~~~~pG~~~~~h~H~~~~e~~~vl~G~~~~~~---~~~---~~~l~~Gd~~~i---~~~~~H~~~n~~~~~~~~l~V 70 (71)
T PF07883_consen 3 VTLPPGGSIPPHRHPGEDEFFYVLSGEGTLTV---DGE---RVELKPGDAIYI---PPGVPHQVRNPGDEPARFLVV 70 (71)
T ss_dssp EEEETTEEEEEEEESSEEEEEEEEESEEEEEE---TTE---EEEEETTEEEEE---ETTSEEEEEEESSSEEEEEEE
T ss_pred EEECCCCCCCCEECCCCCEEEEEEECCEEEEE---ccE---EeEccCCEEEEE---CCCCeEEEEECCCCCEEEEEE
Confidence 45677776554444444 89999999998874 343 345778874321 123444444444445555543
No 191
>smart00266 CAD Domains present in proteins implicated in post-mortem DNA fragmentation.
Probab=66.56 E-value=15 Score=28.80 Aligned_cols=49 Identities=14% Similarity=0.376 Sum_probs=38.7
Q ss_pred cCccHHHHHHHHHhHcCCCC-Ccc-cccCCCceeee---eeeeecCCeEEEeec
Q 003425 771 IPQNIKDLIKTAAEQLDFRG-GDC-ILSSEGGKILD---VDMINDDQKLYLIQE 819 (821)
Q Consensus 771 lp~~~~~l~~~~~~~~~~~~-~~~-~~~~~g~~~~~---~~~~r~~~~~~~~~~ 819 (821)
.-.+++||+..+.++|+.+. +.+ ++.+||-++++ +...-||..+.++..
T Consensus 17 ~A~sL~eL~~K~~~~l~l~~~~~~l~L~eDGT~VddEeyF~tLp~nt~l~~L~~ 70 (74)
T smart00266 17 AASSLEELLSKVCDKLALPDSPVTLVLEEDGTIVDDEEYFQTLPDNTELMALEK 70 (74)
T ss_pred EcCCHHHHHHHHHHHhCCCCCCcEEEEecCCcEEccHHHHhcCCCCcEEEEEcC
Confidence 34789999999999999973 344 48899999976 777778887777654
No 192
>KOG1545 consensus Voltage-gated shaker-like K+ channel KCNA [Inorganic ion transport and metabolism]
Probab=65.97 E-value=12 Score=38.62 Aligned_cols=49 Identities=14% Similarity=0.167 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhHhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 003425 177 YLLWIRLYRVRKVSQFFHKMEKDIRINYMFSRIVKLIAVELYCSHIAACI 226 (821)
Q Consensus 177 ~l~llrl~rl~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~h~~ac~ 226 (821)
+||++||.|++|+.++.++.+..--+...+..-..-+.+++++ .+.+.+
T Consensus 325 ILRViRLVRVFRIFKLSRHSkGLQILGqTl~aSmrElgLLIFF-lfIgvi 373 (507)
T KOG1545|consen 325 ILRVIRLVRVFRIFKLSRHSKGLQILGQTLRASMRELGLLIFF-LFIGVI 373 (507)
T ss_pred HHHHHHHHHHhhheeeccccchHHHHHHHHHHHHHHHHHHHHH-HHHHHH
Confidence 4667777777777776666554444444544444444444443 333433
No 193
>cd06535 CIDE_N_CAD CIDE_N domain of CAD nuclease. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of CAD nuclease (caspase-activated DNase/DNA fragmentation factor, DFF40) and its inhibitor, ICAD(DFF45). These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of CAD/DFF40 and ICAD/DFF45 during apoptosis. In normal cells, DFF exists in the nucleus as a heterodimer composed of CAD/DFF40 as a latent nuclease and its chaperone and inhibitor subunit ICAD/DFF45. Apoptotic activation of caspase-3 results in the cleavage of DFF45/ICAD and the release of active DFF40/CAD nuclease.
Probab=63.55 E-value=17 Score=28.72 Aligned_cols=49 Identities=18% Similarity=0.428 Sum_probs=38.9
Q ss_pred cCccHHHHHHHHHhHcCCCCC-ccc-ccCCCceeee--eeeeecCCeEEEeec
Q 003425 771 IPQNIKDLIKTAAEQLDFRGG-DCI-LSSEGGKILD--VDMINDDQKLYLIQE 819 (821)
Q Consensus 771 lp~~~~~l~~~~~~~~~~~~~-~~~-~~~~g~~~~~--~~~~r~~~~~~~~~~ 819 (821)
.-.+++||+..+.++|..+.+ .++ +.+||-+++| +...-||..+.+++.
T Consensus 19 ~A~sL~eL~~K~~~~l~l~~~~~~l~L~eDGTeVtEeyF~tLp~nT~lmvL~~ 71 (77)
T cd06535 19 AAKNLKELLRKGCRLLQLPCAGSRLCLYEDGTEVTEEYFPTLPDNTELVLLTP 71 (77)
T ss_pred EcCCHHHHHHHHHHHhCCCCCCcEEEEecCCcEehHHHHhcCCCCcEEEEEcC
Confidence 347899999999999999743 344 8999999976 777778887777654
No 194
>cd06538 CIDE_N_FSP27 CIDE_N domain of FSP27 proteins. The CIDE-N (cell death-inducing DFF45-like effector, N-terminal) domain is found in the FSP27/CIDE-C protein, which has been identified as a n adipocyte lipid droplet protein that negatively regulates lipolysis and promotes triglyceride accumulation. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, CIDE proteins were initially characterized as mitochondrial activators of apoptosis. The CIDE-N domain of FSP27 is sufficient to increase apoptosis in vitro when overexpressed.
Probab=63.49 E-value=19 Score=28.70 Aligned_cols=49 Identities=12% Similarity=0.309 Sum_probs=38.5
Q ss_pred cCccHHHHHHHHHhHcCCCCCc-ccccCCCceeee---eeeeecCCeEEEeec
Q 003425 771 IPQNIKDLIKTAAEQLDFRGGD-CILSSEGGKILD---VDMINDDQKLYLIQE 819 (821)
Q Consensus 771 lp~~~~~l~~~~~~~~~~~~~~-~~~~~~g~~~~~---~~~~r~~~~~~~~~~ 819 (821)
.-.+++||+..+.++|+.+.+. -++.+||-++++ +...-||..+.++..
T Consensus 19 ~A~sL~eL~~K~~~~l~l~~~~~lvL~eDGT~Vd~EeyF~tLp~nt~l~vL~~ 71 (79)
T cd06538 19 MADSLEDLLNKVLDALLLDCISSLVLDEDGTGVDTEEFFQALADNTVFMVLGK 71 (79)
T ss_pred EcCCHHHHHHHHHHHcCCCCccEEEEecCCcEEccHHHHhhCCCCcEEEEECC
Confidence 3578999999999999996543 458899999966 677777777766654
No 195
>cd06536 CIDE_N_ICAD CIDE_N domain of ICAD. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CAD nuclease (caspase-activated DNase/DNA fragmentation factor, DFF40) and its inhibitor, ICAD (DFF45). These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40 and ICAD/DFF45 during apoptosis. In normal cells, DFF exists in the nucleus as a heterodimer composed of CAD/DFF40 as a latent nuclease and its chaperone and inhibitor subunit ICAD/DFF45. Apoptotic activation of caspase-3 results in the cleavage of DFF45/ICAD and release of active DFF40/CAD nuclease.
Probab=61.81 E-value=20 Score=28.59 Aligned_cols=49 Identities=22% Similarity=0.343 Sum_probs=38.5
Q ss_pred cCccHHHHHHHHHhHcCCCC---Cc-ccccCCCceeee---eeeeecCCeEEEeec
Q 003425 771 IPQNIKDLIKTAAEQLDFRG---GD-CILSSEGGKILD---VDMINDDQKLYLIQE 819 (821)
Q Consensus 771 lp~~~~~l~~~~~~~~~~~~---~~-~~~~~~g~~~~~---~~~~r~~~~~~~~~~ 819 (821)
.-.+++||+..+.++|+.+. +. -++.+||-++++ +...-||..+.++.+
T Consensus 19 ~A~sL~eL~~K~~~~l~l~~~~~~~~lvL~eDGT~VddEeyF~tLp~nT~l~~L~~ 74 (80)
T cd06536 19 AASSLEELRIKACESLGFDSSSAPITLVLAEDGTIVEDEDYFLCLPPNTKFVLLAE 74 (80)
T ss_pred EcCCHHHHHHHHHHHhCCCCCCCceEEEEecCCcEEccHHHHhhCCCCcEEEEECC
Confidence 34789999999999999972 23 348899999976 777778888777664
No 196
>KOG0513 consensus Ca2+-independent phospholipase A2 [Lipid transport and metabolism]
Probab=61.27 E-value=2 Score=47.64 Aligned_cols=174 Identities=16% Similarity=-0.006 Sum_probs=94.7
Q ss_pred ccchhhhHhhhHHHHhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHc-CCHHHHHHHHHcCCCCCCCCCCCCcHHH
Q 003425 532 ISKHEAELALKVNSAAYHGDLYQLEGLIRAGADPNRTDYDGRSPLHLAASR-GYEEIMTFLIQKGVDINLKDNFGNTPLL 610 (821)
Q Consensus 532 ~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~-g~~~~v~~Ll~~g~~~~~~~~~g~tpL~ 610 (821)
+......+.++.+.+...|+...++..... |+. .....++-++++.. ...++. .-..+.+.+|
T Consensus 48 i~~~~s~~~~~~~l~~~~g~~~~~~~a~~f--Dv~--~~g~~~~gl~~aml~a~~~~~------------~P~~~a~~~~ 111 (503)
T KOG0513|consen 48 INQGVSLAYLELRLQNIDGDPSAARLADYF--DVS--IAGTNTGGLITAMLFAPNDCG------------RPRFGATDIL 111 (503)
T ss_pred hhhhhhhcccHHHHHhccCChHhhHhhhcc--Cce--eeccCCchhhhhhhhcccccc------------Cccccccchh
Confidence 445556667777888888887766555332 221 22233443333322 111111 2234555666
Q ss_pred HHHHcCChHHHHHHHhcCCCCC--cccccchhhHHHhcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHH
Q 003425 611 EAIKYGNDGAASLLVKEGASLN--VEEAGSFLCTAVARGDSDLLKRVLSNGIDPNTRDYDLRTPLHVAASEGLYLMAKLL 688 (821)
Q Consensus 611 ~A~~~~~~~~v~~Ll~~~~~~~--~~~~~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~T~Lh~A~~~g~~~~v~~L 688 (821)
++...++ ...|+....+.+ ..+..++++..+.....+.+..++..+...+..+..|+|+||.+...++. +..+
T Consensus 112 ~~~~~~~---~~~ll~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~~~~~~~~~~~g~t~L~~tl~~~~~--~~~i 186 (503)
T KOG0513|consen 112 WKFNLEK---APKLLEKFDDPNFIKGDLNLALRILVSGDKYSGAEVLLTKYEIADAREVLGNTKLHLTLTKENL--LVVI 186 (503)
T ss_pred hhhhhcC---CCccccccccccccccccccceeeeecCccccceeecccccccchhhhhcCCceeeeeccCCCc--ceEE
Confidence 6544332 233444443333 23355677777777777777777776666667777899999999888776 2222
Q ss_pred HHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccCC
Q 003425 689 VEAGASVFPKDRWGNTPLDEGRMCGNKNLIKLLEDAKSTQLLEFP 733 (821)
Q Consensus 689 l~~ga~~~~~d~~g~t~l~~A~~~~~~~i~~~Ll~~~a~~~~~~~ 733 (821)
. ..|-++.+|+++.+..+..+-+-.++++++.......
T Consensus 187 ~-------~ldl~~~~P~lf~~~~~~~~~~v~~~~~~~~~~c~~t 224 (503)
T KOG0513|consen 187 P-------CLDLKSLTPNLFSIYDALGTKIVPLLDFKAIDICIDT 224 (503)
T ss_pred E-------eeccCcCCceeeeeeccccccchhhhhhhhhhhhhcc
Confidence 2 2233346777776665554433334445544443333
No 197
>smart00835 Cupin_1 Cupin. This family represents the conserved barrel domain of the 'cupin' superfamily ('cupa' is the Latin term for a small barrel). This family contains 11S and 7S plant seed storage proteins, and germins. Plant seed storage proteins provide the major nitrogen source for the developing plant.
Probab=59.74 E-value=22 Score=32.54 Aligned_cols=79 Identities=15% Similarity=0.143 Sum_probs=47.1
Q ss_pred cccccccccCeEEccCC-ccCeEEEEEeeEEEEEeeccCCccceEEEeCCCCccccccccccCCcceEEEEecceEEEEe
Q 003425 410 LHEEFFLPGEVIMEKGN-VVDQLYFVCLGKLEEVGIEENGTEDYVSYLHPNSSFGEVSILCNIPQPYTVQVCELCRLLRI 488 (821)
Q Consensus 410 ~~~~~~~~~e~I~~~g~-~~~~ly~I~~G~v~~~~~~~~g~~~~i~~l~~G~~fGe~~~~~~~~~~~~~~a~~~~~~~~i 488 (821)
+....+.||...-..-- ...++++|++|+..+.....++++.....+.+||.+=-.+ +.++.......+++.++.+
T Consensus 32 ~~~~~i~pg~~~~~h~H~~~~e~~~Vl~G~~~~~~~~~~~~~~~~~~l~~GD~~~ip~---g~~H~~~n~~~~~~~~l~~ 108 (146)
T smart00835 32 AARVNLEPGGMLPPHYHPRATELLYVVRGEGRVGVVDPNGNKVYDARLREGDVFVVPQ---GHPHFQVNSGDENLEFVAF 108 (146)
T ss_pred EEEEEecCCcCcCCeeCCCCCEEEEEEeCeEEEEEEeCCCCeEEEEEecCCCEEEECC---CCEEEEEcCCCCCEEEEEE
Confidence 33456777776544332 2568999999999988755555566677789999654322 2333222222345566655
Q ss_pred chH
Q 003425 489 DKQ 491 (821)
Q Consensus 489 ~~~ 491 (821)
+..
T Consensus 109 ~~~ 111 (146)
T smart00835 109 NTN 111 (146)
T ss_pred ecC
Confidence 443
No 198
>PF02017 CIDE-N: CIDE-N domain; InterPro: IPR003508 This domain consists of caspase-activated (CAD) nucleases, which induce DNA fragmentation and chromatin condensation during apoptosis, and the cell death activator proteins CIDE-A and CIDE-B, which are inhibitors of CAD nuclease. The two proteins interact through the region defined by the method signatures.; GO: 0006915 apoptosis, 0005622 intracellular; PDB: 1IBX_A 2EEL_A 1F2R_I 1C9F_A 1D4B_A.
Probab=55.18 E-value=16 Score=29.14 Aligned_cols=49 Identities=18% Similarity=0.432 Sum_probs=37.8
Q ss_pred cCccHHHHHHHHHhHcCCC-CCc-ccccCCCceeee---eeeeecCCeEEEeec
Q 003425 771 IPQNIKDLIKTAAEQLDFR-GGD-CILSSEGGKILD---VDMINDDQKLYLIQE 819 (821)
Q Consensus 771 lp~~~~~l~~~~~~~~~~~-~~~-~~~~~~g~~~~~---~~~~r~~~~~~~~~~ 819 (821)
.-.+++||+..+.++|+.+ .+. -++.+||-+++| +...-||..+.++..
T Consensus 19 ~A~sL~eL~~K~~~~l~~~~~~~~lvL~eDGT~VddEeyF~tLp~nT~lm~L~~ 72 (78)
T PF02017_consen 19 AASSLEELLEKACDKLQLPEEPVRLVLEEDGTEVDDEEYFQTLPDNTVLMLLEK 72 (78)
T ss_dssp EESSHHHHHHHHHHHHT-SSSTCEEEETTTTCBESSCHHHCCSSSSEEEEEEES
T ss_pred EcCCHHHHHHHHHHHhCCCCcCcEEEEeCCCcEEccHHHHhhCCCCCEEEEECC
Confidence 3489999999999999998 333 457789999995 677778887777664
No 199
>PF03607 DCX: Doublecortin; InterPro: IPR003533 X-linked lissencephaly is a severe brain malformation affecting males. Recently it has been demonstrated that the doublecortin gene is implicated in this disorder []. Doublecortin was found to bind to the microtubule cytoskeleton. In vivo and in vitro assays show that Doublecortin stabilises microtubules and causes bundling []. Doublecortin is a basic protein with an iso-electric point of 10, typical of microtubule-binding proteins. However, its sequence contains no known microtubule-binding domain(s). The detailed sequence analysis of Doublecortin and Doublecortin-like proteins allowed the identification of an evolutionarily conserved Doublecortin (DC) domain. This domain is found in the N terminus of proteins and consists of one or two tandemly repeated copies of an around 80 amino acids region. It has been suggested that the first DC domain of Doublecortin binds tubulin and enhances microtubule polymerisation []. Some proteins known to contain a DC domain are listed below: Doublecortin. It is required for neuronal migration []. A large number of point mutations in the human DCX gene leading to lissencephaly are located within the DC domains []. Human serine/threonine-protein kinase DCAMKL1. It is a probable kinase that may be involved in a calcium-signaling pathway controling neuronal migration in the developing brain []. Retinitis pigmentosa 1 protein. It could play a role in the differentiation of photoreceptor cells. Mutation in the human RP1 gene cause retinitis pigmentosa of type 1 []. ; GO: 0035556 intracellular signal transduction; PDB: 1UF0_A 1MG4_A 1MFW_A 2DNF_A 2XRP_I 2BQQ_A 1MJD_A.
Probab=55.03 E-value=15 Score=27.62 Aligned_cols=47 Identities=15% Similarity=0.427 Sum_probs=36.6
Q ss_pred ccHHHHHHHHHhHcCCCCC-cccccCCCceeeeeeeeecCCeEEEeecC
Q 003425 773 QNIKDLIKTAAEQLDFRGG-DCILSSEGGKILDVDMINDDQKLYLIQET 820 (821)
Q Consensus 773 ~~~~~l~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~r~~~~~~~~~~~ 820 (821)
.+++.+++...++.+.+.+ .++.+.+|.+|.+++-++||+. |++++.
T Consensus 9 ~s~e~lL~~it~~v~l~~gVr~lyt~~G~~V~~l~~l~dg~~-yVa~g~ 56 (60)
T PF03607_consen 9 RSFEQLLDEITEKVQLPSGVRKLYTLDGKRVKSLDELEDGGS-YVASGR 56 (60)
T ss_dssp SSHHHHHHHHHHSSSSTTS-SEEEETTSSEESSGGGS-TTEE-EEEESS
T ss_pred cCHHHHHHHHHhhcCCCcccceEECCCCCEeCCHHHHCCCCE-EEEEcC
Confidence 3688899999998888654 5678899999999999999876 555543
No 200
>PF14377 DUF4414: Domain of unknown function (DUF4414)
Probab=54.48 E-value=26 Score=30.17 Aligned_cols=42 Identities=24% Similarity=0.406 Sum_probs=32.5
Q ss_pred CCCHHHHHHHHHHHHHHhhc------------cccHHHHHhhCcHHHHHHHHHh
Q 003425 342 RLGRDIRDQIIGHLRLQYES------------SYTEASVLQDIPISIRAKISQT 383 (821)
Q Consensus 342 ~lp~~l~~ri~~y~~~~~~~------------~~~~~~~l~~lp~~L~~~i~~~ 383 (821)
-||+++|..|..++...-.. ..+...++..||++||++|...
T Consensus 52 ALP~diR~EVl~qe~~~~~~~~~~~~~~~~~~~~d~asflatl~p~LR~evL~~ 105 (108)
T PF14377_consen 52 ALPPDIREEVLAQERRERRRQERQQNARQHPQEMDNASFLATLPPELRREVLLD 105 (108)
T ss_pred hCCHHHHHHHHHHHHHHHHHhhhccccccCCCCCCHHHHHHhCCHHHHHHHhhc
Confidence 38999999999988754321 1346789999999999998654
No 201
>PLN03081 pentatricopeptide (PPR) repeat-containing protein; Provisional
Probab=52.26 E-value=3e+02 Score=32.73 Aligned_cols=169 Identities=13% Similarity=0.057 Sum_probs=90.4
Q ss_pred hhhHHHHhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHH-HHHHcCCHHHHH----HHHHcCCCCCCCCCCCCcHHHHHHH
Q 003425 540 ALKVNSAAYHGDLYQLEGLIRAGADPNRTDYDGRSPLH-LAASRGYEEIMT----FLIQKGVDINLKDNFGNTPLLEAIK 614 (821)
Q Consensus 540 ~~~L~~A~~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~-~A~~~g~~~~v~----~Ll~~g~~~~~~~~~g~tpL~~A~~ 614 (821)
.+-+..-++.|+.+.+..+.+.-... |...++.|. ..+..|..+-+. .+.+.|..+|.... .+.+...+.
T Consensus 263 n~Li~~y~k~g~~~~A~~vf~~m~~~---~~vt~n~li~~y~~~g~~~eA~~lf~~M~~~g~~pd~~t~--~~ll~a~~~ 337 (697)
T PLN03081 263 CALIDMYSKCGDIEDARCVFDGMPEK---TTVAWNSMLAGYALHGYSEEALCLYYEMRDSGVSIDQFTF--SIMIRIFSR 337 (697)
T ss_pred HHHHHHHHHCCCHHHHHHHHHhCCCC---ChhHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCCHHHH--HHHHHHHHh
Confidence 34455666777777777777653332 223334443 334566554333 33345665554321 133444455
Q ss_pred cCChHHH----HHHHhcCCCCCcccccchhhHHHhcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHH-HHcCcHH----HH
Q 003425 615 YGNDGAA----SLLVKEGASLNVEEAGSFLCTAVARGDSDLLKRVLSNGIDPNTRDYDLRTPLHVA-ASEGLYL----MA 685 (821)
Q Consensus 615 ~~~~~~v----~~Ll~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~T~Lh~A-~~~g~~~----~v 685 (821)
.|..+-+ ..+++.|..++.....+.+..-++.|+.+-+..+++.-... |..-++.|..+ ++.|+.+ +.
T Consensus 338 ~g~~~~a~~i~~~m~~~g~~~d~~~~~~Li~~y~k~G~~~~A~~vf~~m~~~---d~~t~n~lI~~y~~~G~~~~A~~lf 414 (697)
T PLN03081 338 LALLEHAKQAHAGLIRTGFPLDIVANTALVDLYSKWGRMEDARNVFDRMPRK---NLISWNALIAGYGNHGRGTKAVEMF 414 (697)
T ss_pred ccchHHHHHHHHHHHHhCCCCCeeehHHHHHHHHHCCCHHHHHHHHHhCCCC---CeeeHHHHHHHHHHcCCHHHHHHHH
Confidence 5665543 34455677776666777777888888888777777643332 33345555444 4566654 34
Q ss_pred HHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHH
Q 003425 686 KLLVEAGASVFPKDRWGNTPLDEGRMCGNKNLI 718 (821)
Q Consensus 686 ~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~i~ 718 (821)
+.+.+.|..+|.... .+.+...+..|..+-.
T Consensus 415 ~~M~~~g~~Pd~~T~--~~ll~a~~~~g~~~~a 445 (697)
T PLN03081 415 ERMIAEGVAPNHVTF--LAVLSACRYSGLSEQG 445 (697)
T ss_pred HHHHHhCCCCCHHHH--HHHHHHHhcCCcHHHH
Confidence 444456766654331 1233344455655443
No 202
>KOG1052 consensus Glutamate-gated kainate-type ion channel receptor subunit GluR5 and related subunits [Inorganic ion transport and metabolism; Amino acid transport and metabolism; Signal transduction mechanisms]
Probab=52.24 E-value=45 Score=39.44 Aligned_cols=53 Identities=19% Similarity=0.296 Sum_probs=45.6
Q ss_pred HHHHHHHHHHhhccccCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 003425 267 ITSMYASVVTMTTVGYGDVHAVNLREMVFIMIYVSFDMILGAYLIGNMTALIVK 320 (821)
Q Consensus 267 ~~s~yw~~~t~tTvGyGdi~p~t~~e~~~~~~~~i~g~~~~a~~i~~i~~~~~~ 320 (821)
..++|.++.++..-| ++..|.+...+++..++.+++.++.+.-.+++++++..
T Consensus 383 ~~~~~~~~~~~~~q~-~~~~p~~~~~Rll~~~w~~~~lil~ssYTa~L~a~Lt~ 435 (656)
T KOG1052|consen 383 LNCLWLTVGSLLQQG-SDEIPRSLSTRLLLGAWWLFVLILISSYTANLTAFLTV 435 (656)
T ss_pred ccchhhhhHHHhccC-CCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 346787888788877 56999999999999999999999999999999998755
No 203
>PLN03218 maturation of RBCL 1; Provisional
Probab=52.17 E-value=1.1e+02 Score=38.07 Aligned_cols=87 Identities=14% Similarity=0.055 Sum_probs=36.7
Q ss_pred CCCCCcccccchhhHHHhcCCHHHHH----HHHHCCCCCCCCCCCCCcHHHHHHHcCcHHHH----HHHHHcCCCCCCCC
Q 003425 628 GASLNVEEAGSFLCTAVARGDSDLLK----RVLSNGIDPNTRDYDLRTPLHVAASEGLYLMA----KLLVEAGASVFPKD 699 (821)
Q Consensus 628 ~~~~~~~~~~t~l~~A~~~~~~~~v~----~Ll~~g~~~~~~d~~g~T~Lh~A~~~g~~~~v----~~Ll~~ga~~~~~d 699 (821)
|..++...-.+.+...++.|+.+-+. .+.+.|..+|... -.+.+...+..|+.+-+ +.+.+.|..++..-
T Consensus 609 gi~p~~~tynsLI~ay~k~G~~deAl~lf~eM~~~Gv~PD~~T--ynsLI~a~~k~G~~eeA~~l~~eM~k~G~~pd~~t 686 (1060)
T PLN03218 609 NIKGTPEVYTIAVNSCSQKGDWDFALSIYDDMKKKGVKPDEVF--FSALVDVAGHAGDLDKAFEILQDARKQGIKLGTVS 686 (1060)
T ss_pred CCCCChHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCCHHH--HHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCCHHH
Confidence 33333333334455555555543322 2333454443221 12334444555554433 33333454443321
Q ss_pred CCCCCHHHHHHHcCCHHHH
Q 003425 700 RWGNTPLDEGRMCGNKNLI 718 (821)
Q Consensus 700 ~~g~t~l~~A~~~~~~~i~ 718 (821)
-.+.++..++.|..+-+
T Consensus 687 --ynsLI~ay~k~G~~eeA 703 (1060)
T PLN03218 687 --YSSLMGACSNAKNWKKA 703 (1060)
T ss_pred --HHHHHHHHHhCCCHHHH
Confidence 23345555566665543
No 204
>PF13314 DUF4083: Domain of unknown function (DUF4083)
Probab=50.06 E-value=1e+02 Score=22.78 Aligned_cols=15 Identities=7% Similarity=0.481 Sum_probs=10.9
Q ss_pred HHHHHHHHHHHHHHh
Q 003425 326 KFRDKMTDLMKYINR 340 (821)
Q Consensus 326 ~~~~~~~~~~~~m~~ 340 (821)
..++|++.+-+.+.+
T Consensus 43 ~~eqKLDrIIeLLEK 57 (58)
T PF13314_consen 43 SMEQKLDRIIELLEK 57 (58)
T ss_pred HHHHHHHHHHHHHcc
Confidence 577888887776654
No 205
>PLN03081 pentatricopeptide (PPR) repeat-containing protein; Provisional
Probab=49.70 E-value=2.8e+02 Score=33.03 Aligned_cols=13 Identities=15% Similarity=0.110 Sum_probs=7.0
Q ss_pred HcCcHHHHHHHHH
Q 003425 678 SEGLYLMAKLLVE 690 (821)
Q Consensus 678 ~~g~~~~v~~Ll~ 690 (821)
..|+.+..+...+
T Consensus 506 ~~g~~~~a~~~~~ 518 (697)
T PLN03081 506 IHKNLELGRLAAE 518 (697)
T ss_pred HcCCcHHHHHHHH
Confidence 4566665555444
No 206
>KOG0513 consensus Ca2+-independent phospholipase A2 [Lipid transport and metabolism]
Probab=47.65 E-value=4.7 Score=44.81 Aligned_cols=133 Identities=19% Similarity=0.069 Sum_probs=86.0
Q ss_pred CCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcH-HHHHHHcCChHHHHHHHhcCCCCCcccccchhhHHH
Q 003425 566 NRTDYDGRSPLHLAASRGYEEIMTFLIQKGVDINLKDNFGNTP-LLEAIKYGNDGAASLLVKEGASLNVEEAGSFLCTAV 644 (821)
Q Consensus 566 n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~tp-L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~t~l~~A~ 644 (821)
+.....+.++.+++...|....++.....+.. .....++ ++.|......++. ....+.+.++++.
T Consensus 49 ~~~~s~~~~~~~l~~~~g~~~~~~~a~~fDv~----~~g~~~~gl~~aml~a~~~~~----------~P~~~a~~~~~~~ 114 (503)
T KOG0513|consen 49 NQGVSLAYLELRLQNIDGDPSAARLADYFDVS----IAGTNTGGLITAMLFAPNDCG----------RPRFGATDILWKF 114 (503)
T ss_pred hhhhhhcccHHHHHhccCChHhhHhhhccCce----eeccCCchhhhhhhhcccccc----------Cccccccchhhhh
Confidence 44556778899999999988877665544321 2223344 4444332222221 2233445555544
Q ss_pred hcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCH
Q 003425 645 ARGDSDLLKRVLSNGIDPNTRDYDLRTPLHVAASEGLYLMAKLLVEAGASVFPKDRWGNTPLDEGRMCGNK 715 (821)
Q Consensus 645 ~~~~~~~v~~Ll~~g~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~ 715 (821)
..+ ....|+..+.+.|....+..++++.++.....+++..++.++..-...+..|.|+||.+...++.
T Consensus 115 ~~~---~~~~ll~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~~~~~~~~~~~g~t~L~~tl~~~~~ 182 (503)
T KOG0513|consen 115 NLE---KAPKLLEKFDDPNFIKGDLNLALRILVSGDKYSGAEVLLTKYEIADAREVLGNTKLHLTLTKENL 182 (503)
T ss_pred hhc---CCCccccccccccccccccccceeeeecCccccceeecccccccchhhhhcCCceeeeeccCCCc
Confidence 332 23344555555554445678899999999999999888887777777788999999999999887
No 207
>PHA01757 hypothetical protein
Probab=47.34 E-value=87 Score=24.58 Aligned_cols=47 Identities=15% Similarity=0.330 Sum_probs=33.7
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHH
Q 003425 289 NLREMVFIMIYVSFDMILGAYLIGNMTALIVKGSKTEKFRDKMTDLM 335 (821)
Q Consensus 289 t~~e~~~~~~~~i~g~~~~a~~i~~i~~~~~~~~~~~~~~~~~~~~~ 335 (821)
+..|-.+--++...|.+.-.+++|.+.-+.....+.+.|.+-.+++.
T Consensus 4 ~l~e~al~gf~a~~g~l~~~fii~e~~hlynek~~nenf~~AvD~m~ 50 (98)
T PHA01757 4 TLLEGALYGFFAVTGALSASFIIGEIVHLYNEKQRNENFAKAIDQMS 50 (98)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhHhHHHHHHHHH
Confidence 34555566677888999999999999888766666666666655543
No 208
>KOG2378 consensus cAMP-regulated guanine nucleotide exchange factor [Signal transduction mechanisms]
Probab=46.44 E-value=19 Score=38.49 Aligned_cols=44 Identities=27% Similarity=0.569 Sum_probs=38.9
Q ss_pred CCCccccccccccCCcceEEEEecc-eEEEEechHhHHHHHHHhh
Q 003425 458 PNSSFGEVSILCNIPQPYTVQVCEL-CRLLRIDKQSFTNIIDIYF 501 (821)
Q Consensus 458 ~G~~fGe~~~~~~~~~~~~~~a~~~-~~~~~i~~~~f~~~l~~~p 501 (821)
+||-||..++....||.+++...++ |-++++++.+|..+++.--
T Consensus 1 eGddfgklalvnd~praativl~ed~~~fl~vDk~~Fn~I~~~vE 45 (573)
T KOG2378|consen 1 EGDDFGKLALVNDAPRAATIVLREDNCHFLRVDKHDFNRILHDVE 45 (573)
T ss_pred CCcccchhccccccccccceeeecCCCcceeecHHHHHHHHHhhh
Confidence 5899999999999999999887765 9999999999999987653
No 209
>PLN03218 maturation of RBCL 1; Provisional
Probab=45.39 E-value=1.6e+02 Score=36.80 Aligned_cols=25 Identities=20% Similarity=0.243 Sum_probs=11.3
Q ss_pred cCCCCCcccccchhhHHHhcCCHHH
Q 003425 627 EGASLNVEEAGSFLCTAVARGDSDL 651 (821)
Q Consensus 627 ~~~~~~~~~~~t~l~~A~~~~~~~~ 651 (821)
.|..++...-.+.+...+..|..+.
T Consensus 748 ~Gi~Pd~~Ty~sLL~a~~k~G~le~ 772 (1060)
T PLN03218 748 LGLCPNTITYSILLVASERKDDADV 772 (1060)
T ss_pred cCCCCCHHHHHHHHHHHHHCCCHHH
Confidence 3444444333444444445555443
No 210
>PF06212 GRIM-19: GRIM-19 protein; InterPro: IPR009346 This family consists of several eukaryotic gene associated with retinoic-interferon-induced mortality 19 (GRIM-19) proteins. GRIM-19, was reported to encode a small protein primarily distributed in the nucleus and was able to promote cell death induced by IFN-beta and RA. A bovine homologue of GRIM-19 was co-purified with mitochondrial NADH:ubiquinone oxidoreductase (complex I) in bovine heart. Therefore, its exact cellular localisation and function are unclear. It has now been discovered that GRIM-19 is a specific interacting protein which negatively regulates Stat3 activity [].
Probab=45.25 E-value=90 Score=27.82 Aligned_cols=38 Identities=18% Similarity=0.164 Sum_probs=24.6
Q ss_pred HHHHhCCCCHHHHHHHHHHHHHHhhccccHHHHHhhCc
Q 003425 336 KYINRNRLGRDIRDQIIGHLRLQYESSYTEASVLQDIP 373 (821)
Q Consensus 336 ~~m~~~~lp~~l~~ri~~y~~~~~~~~~~~~~~l~~lp 373 (821)
...+..-+|--+-++=++|++....+...|++++++.|
T Consensus 64 ~~ar~al~PlLqAE~DR~~lr~~~~~~~~E~~lMkdVp 101 (130)
T PF06212_consen 64 RWARIALLPLLQAEEDRRYLRRLKANREEEAELMKDVP 101 (130)
T ss_pred HHhHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 33444455666666667777766666667778887765
No 211
>KOG1054 consensus Glutamate-gated AMPA-type ion channel receptor subunit GluR2 and related subunits [Inorganic ion transport and metabolism; Amino acid transport and metabolism; Signal transduction mechanisms]
Probab=41.97 E-value=24 Score=39.06 Aligned_cols=52 Identities=17% Similarity=0.282 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHhhccccCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003425 266 YITSMYASVVTMTTVGYGDVHAVNLREMVFIMIYVSFDMILGAYLIGNMTALI 318 (821)
Q Consensus 266 Y~~s~yw~~~t~tTvGyGdi~p~t~~e~~~~~~~~i~g~~~~a~~i~~i~~~~ 318 (821)
...|+||++.....=| -||.|.+..+++...++-++.+++.+--.+++++.+
T Consensus 596 ifNsLWFsLgAFMQQG-~DI~PRslSGRIvggvWWFFTlIIiSSYTANLAAFL 647 (897)
T KOG1054|consen 596 IFNSLWFSLGAFMQQG-CDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFL 647 (897)
T ss_pred hhHHHHHHHHHHHhcC-CCCCccccccceeccchhhhhhhhhhhhhhHHHHHH
Confidence 3479999999999989 799999999999999998888888877777877765
No 212
>PRK13290 ectC L-ectoine synthase; Reviewed
Probab=41.96 E-value=65 Score=28.58 Aligned_cols=68 Identities=15% Similarity=0.052 Sum_probs=39.7
Q ss_pred ccccccccCeEEccCCccCeEEEEEeeEEEEE-eeccCCccceEEEeCCCCccccccccccCCcceEEEEecceEEEEe
Q 003425 411 HEEFFLPGEVIMEKGNVVDQLYFVCLGKLEEV-GIEENGTEDYVSYLHPNSSFGEVSILCNIPQPYTVQVCELCRLLRI 488 (821)
Q Consensus 411 ~~~~~~~~e~I~~~g~~~~~ly~I~~G~v~~~-~~~~~g~~~~i~~l~~G~~fGe~~~~~~~~~~~~~~a~~~~~~~~i 488 (821)
....++||..+-..-....++++|++|++.+. . .+|++ ..+.+||.+--. .+.+..+.. .++++++.+
T Consensus 38 ~~~~l~pG~~~~~h~h~~~E~~yVL~G~~~~~~i--~~g~~---~~L~aGD~i~~~---~~~~H~~~N--~e~~~~l~v 106 (125)
T PRK13290 38 HETTIYAGTETHLHYKNHLEAVYCIEGEGEVEDL--ATGEV---HPIRPGTMYALD---KHDRHYLRA--GEDMRLVCV 106 (125)
T ss_pred EEEEECCCCcccceeCCCEEEEEEEeCEEEEEEc--CCCEE---EEeCCCeEEEEC---CCCcEEEEc--CCCEEEEEE
Confidence 34577888654322112247999999999876 3 12433 458899965422 244444333 377777665
No 213
>PF08285 DPM3: Dolichol-phosphate mannosyltransferase subunit 3 (DPM3); InterPro: IPR013174 This family corresponds to subunit 3 of dolichol-phosphate mannosyltransferase, an enzyme which generates mannosyl donors for glycosylphosphatidylinositols, N-glycan and protein O- and C-mannosylation. DPM3 is an integral membrane protein and plays a role in stabilising the dolichol-phosphate mannosyl transferase complex [].
Probab=40.97 E-value=2.1e+02 Score=23.74 Aligned_cols=42 Identities=5% Similarity=0.180 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHHHHHhc-C---chhHHHHHHHHHHHHHHHhCCCC
Q 003425 303 DMILGAYLIGNMTALIVK-G---SKTEKFRDKMTDLMKYINRNRLG 344 (821)
Q Consensus 303 g~~~~a~~i~~i~~~~~~-~---~~~~~~~~~~~~~~~~m~~~~lp 344 (821)
=+.+.+|..+.++.-+.. + ...++.++++++.++.++++++.
T Consensus 45 Lv~fG~Ysl~~lgy~v~tFnDcpeA~~eL~~eI~eAK~dLr~kGv~ 90 (91)
T PF08285_consen 45 LVSFGCYSLFTLGYGVATFNDCPEAAKELQKEIKEAKADLRKKGVD 90 (91)
T ss_pred HHHHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 345556666776554433 2 23456778888888899988863
No 214
>PF08016 PKD_channel: Polycystin cation channel; InterPro: IPR013122 Polycystic kidney diseases (PKD) are disorders characterised by large numbers of cysts distributed throughout grossly-enlarged kidneys. Cyst development is associated with impairment of kidney function, and ultimately kidney failure and death []. Most cases of autosomal dominant PKD result from mutations in the PKD1 gene that cause premature protein termination. A second gene for autosomal dominant polycystic kidney disease has been identified by positional cloning []. The predicted 968-amino acid sequence of the PKD2 gene product (polycystin-2) contains 6 transmembrane domains, with intracellular N- and C-termini. Polycystin-2 shares some similarity with the family of voltage-activated calcium (and sodium) channels, and contains a potential calcium-binding domain. Polycystin-2 is strongly expressed in ovary, foetal and adult kidney, testis, and small intestine. Polycystin-1 requires the presence of this protein for stable expression and is believed to interact with it via its C terminus. All mutations between exons 1 and 11 result in a truncated polycystin-2 that lacks a calcium-binding EF-hand domain and the cytoplasmic domains required for the interaction of polycystin-2 with polycystin-1 []. PKD2, although clinically milder than PKD1, has a deleterious impact on life expectancy. This entry contains proteins belonging to the polycystin family including Mucolipin and Polycystin-1 and -2 (PKD1 and PKD2). The domain contains the cation channel region of PKD1 and PKD2 proteins. PKD1 and PKD2 may function through a common signalling pathway that is necessary for normal tubulogenesis. The PKD2 gene product has six transmembrane spans with intracellular amino- and carboxyl-termini []. Mucolipin is a cationic channel which probably plays a role in the endocytic pathway and in the control of membrane trafficking of proteins and lipids. It could play a major role in the calcium ion transport regulating lysosomal exocytosis [, , ].
Probab=35.99 E-value=6.3e+02 Score=27.84 Aligned_cols=20 Identities=25% Similarity=0.106 Sum_probs=11.2
Q ss_pred cCeehhHHHHHHHHHHhHhh
Q 003425 103 KNLYVLDIVGQIAFLFDIVL 122 (821)
Q Consensus 103 ~~~~~~~~~~~~~f~~Di~l 122 (821)
..|.++|++..++.+.=+++
T Consensus 242 ~~WN~~e~~ii~ls~~~i~~ 261 (425)
T PF08016_consen 242 SFWNWLELLIILLSLAVIVL 261 (425)
T ss_pred hcCcHHHHHHHHHHHHHHHH
Confidence 45667777665554444444
No 215
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=34.38 E-value=85 Score=34.81 Aligned_cols=21 Identities=24% Similarity=0.208 Sum_probs=9.5
Q ss_pred cHHHHHHHcCcH-HHHHHHHHc
Q 003425 671 TPLHVAASEGLY-LMAKLLVEA 691 (821)
Q Consensus 671 T~Lh~A~~~g~~-~~v~~Ll~~ 691 (821)
.+++.|...|+. +++++|++.
T Consensus 407 ~af~~~~~lgd~~~cv~lL~~~ 428 (443)
T PF04053_consen 407 IAFQAALLLGDVEECVDLLIET 428 (443)
T ss_dssp HHHHHHHHHT-HHHHHHHHHHT
T ss_pred HHHHHHHHcCCHHHHHHHHHHc
Confidence 344444444443 355555543
No 216
>TIGR00933 2a38 potassium uptake protein, TrkH family. The proteins of the Trk family are derived from Gram-negative and Gram-positive bacteria, yeast and wheat. The proteins of E. coli K12 TrkH and TrkG as well as several yeast proteins have been functionally characterized.The E. coli TrkH and TrkG proteins are complexed to two peripheral membrane proteins, TrkA, an NAD-binding protein, and TrkE, an ATP-binding protein. This complex forms the potassium uptake system.
Probab=30.98 E-value=3.9e+02 Score=29.10 Aligned_cols=47 Identities=6% Similarity=0.094 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHhhccccCcccc------CChhHHHHHHHHHHHHHHHHHHHH
Q 003425 265 SYITSMYASVVTMTTVGYGDVHA------VNLREMVFIMIYVSFDMILGAYLI 311 (821)
Q Consensus 265 ~Y~~s~yw~~~t~tTvGyGdi~p------~t~~e~~~~~~~~i~g~~~~a~~i 311 (821)
.+.+|++-++++++|-|+.-... .++.-.++.++.|++|.+-|+...
T Consensus 128 ~~~~Aif~avSa~~taGFs~~~~~~~~~~~~~~i~~v~~~lm~iGg~gF~v~~ 180 (390)
T TIGR00933 128 PLFDAIFHSISAFNNGGFSTHSDSSIGYFHDPSVNLVIAFLIILGGLGFTVHY 180 (390)
T ss_pred HHHHHHHHHHHHHhcCCcCCCCCcchhhccChHHHHHHHHHHHHHhcCHHHHH
Confidence 57799999999999999744332 123244556666777766665544
No 217
>KOG0292 consensus Vesicle coat complex COPI, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=30.30 E-value=81 Score=37.11 Aligned_cols=220 Identities=15% Similarity=0.119 Sum_probs=111.5
Q ss_pred CcceEEEEecceEEEEechHhHHHHHHHhhhchHHHHHHHhcCCcchhhhhhhcccccccccchhhhHhhhHHHHhhcCC
Q 003425 472 PQPYTVQVCELCRLLRIDKQSFTNIIDIYFCDGRKVLTNLLQGKESDLRLKQLQSDITFHISKHEAELALKVNSAAYHGD 551 (821)
Q Consensus 472 ~~~~~~~a~~~~~~~~i~~~~f~~~l~~~p~~~~~~l~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~A~~~g~ 551 (821)
..+..+.+++.-.+++++|+.=.+++.-.|.. ...+.++.++..+....+.+ ..+--|..++-+--+.|.
T Consensus 566 d~~iyitkv~gn~V~cl~rd~~~~~~~IDptE--y~FKlALi~k~ydeVl~lI~--------ns~LvGqaiIaYLqKkgy 635 (1202)
T KOG0292|consen 566 DKPIYITKVKGNKVFCLNRDGEIECLTIDPTE--YRFKLALLNKKYDEVLHLIK--------NSNLVGQAIIAYLQKKGY 635 (1202)
T ss_pred ccceEEEEeeCCEEEEEecCCCeEEEeechHH--HHHHHHHHhhhhHHHHHHHH--------hcCcccHHHHHHHHhcCC
Confidence 34566777777888888888766665555432 22333443333333333221 222234444433333333
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCChHHHHHHHhcCCCC
Q 003425 552 LYQLEGLIRAGADPNRTDYDGRSPLHLAASRGYEEIMTFLIQKGVDINLKDNFGNTPLLEAIKYGNDGAASLLVKEGASL 631 (821)
Q Consensus 552 ~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~ 631 (821)
.++.-..+ ++..|-.-+|...|+.+++--.....-+.+.-..- -..|...|+.+++++..++-.+.
T Consensus 636 peiAL~FV----------kD~~tRF~LaLe~gnle~ale~akkldd~d~w~rL----ge~Al~qgn~~IaEm~yQ~~knf 701 (1202)
T KOG0292|consen 636 PEIALHFV----------KDERTRFELALECGNLEVALEAAKKLDDKDVWERL----GEEALRQGNHQIAEMCYQRTKNF 701 (1202)
T ss_pred cceeeeee----------cCcchheeeehhcCCHHHHHHHHHhcCcHHHHHHH----HHHHHHhcchHHHHHHHHHhhhh
Confidence 33321111 23456666777888887765554443333322111 23466788888988888764333
Q ss_pred CcccccchhhHHHhcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHH--H
Q 003425 632 NVEEAGSFLCTAVARGDSDLLKRVLSNGIDPNTRDYDLRTPLHVAASEGLYLMAKLLVEAGASVFPKDRWGNTPLDE--G 709 (821)
Q Consensus 632 ~~~~~~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~--A 709 (821)
+. .-++-...|+.+-++.+.+- -..-++-.+-++.|...|..+--.-++++ .|..||.| |
T Consensus 702 ek-----LsfLYliTgn~eKL~Km~~i----ae~r~D~~~~~qnalYl~dv~ervkIl~n---------~g~~~laylta 763 (1202)
T KOG0292|consen 702 EK-----LSFLYLITGNLEKLSKMMKI----AEIRNDATGQFQNALYLGDVKERVKILEN---------GGQLPLAYLTA 763 (1202)
T ss_pred hh-----eeEEEEEeCCHHHHHHHHHH----HHhhhhhHHHHHHHHHhccHHHHHHHHHh---------cCcccHHHHHH
Confidence 21 11122234555544444331 01111223456777777776543333332 35666665 6
Q ss_pred HHcCCHHHHHHHHhccccccccCC
Q 003425 710 RMCGNKNLIKLLEDAKSTQLLEFP 733 (821)
Q Consensus 710 ~~~~~~~i~~~Ll~~~a~~~~~~~ 733 (821)
+.+|..+..+-|.+.-.......+
T Consensus 764 ~~~G~~~~ae~l~ee~~~~~~~lP 787 (1202)
T KOG0292|consen 764 AAHGLEDQAEKLGEELEKQVPSLP 787 (1202)
T ss_pred hhcCcHHHHHHHHHhhccccCCCC
Confidence 667777888777765544333333
No 218
>PF05899 Cupin_3: Protein of unknown function (DUF861); InterPro: IPR008579 The function of the proteins in this entry are unknown. They contain the conserved barrel domain of the 'cupin' superfamily and members are specific to plants and bacteria.; PDB: 1RC6_A 3MYX_A 1O5U_A 2K9Z_A 1LKN_A 3ES4_A 1SFN_B 3BCW_A.
Probab=30.23 E-value=84 Score=24.77 Aligned_cols=30 Identities=20% Similarity=0.452 Sum_probs=22.1
Q ss_pred CeEEEEEeeEEEEEeeccCCccceEEEeCCCCccc
Q 003425 429 DQLYFVCLGKLEEVGIEENGTEDYVSYLHPNSSFG 463 (821)
Q Consensus 429 ~~ly~I~~G~v~~~~~~~~g~~~~i~~l~~G~~fG 463 (821)
+++.+|++|.+.+.. ++|.. ..+++||.|=
T Consensus 26 ~E~~~vleG~v~it~--~~G~~---~~~~aGD~~~ 55 (74)
T PF05899_consen 26 DEFFYVLEGEVTITD--EDGET---VTFKAGDAFF 55 (74)
T ss_dssp EEEEEEEEEEEEEEE--TTTEE---EEEETTEEEE
T ss_pred CEEEEEEEeEEEEEE--CCCCE---EEEcCCcEEE
Confidence 788999999998875 35544 4578888553
No 219
>COG0662 {ManC} Mannose-6-phosphate isomerase [Carbohydrate transport and metabolism]
Probab=28.63 E-value=96 Score=27.52 Aligned_cols=47 Identities=21% Similarity=0.296 Sum_probs=31.7
Q ss_pred hcccccccccCeE-EccCCccCeEEEEEeeEEEEEeeccCCccceEEEeCCCCc
Q 003425 409 RLHEEFFLPGEVI-MEKGNVVDQLYFVCLGKLEEVGIEENGTEDYVSYLHPNSS 461 (821)
Q Consensus 409 ~~~~~~~~~~e~I-~~~g~~~~~ly~I~~G~v~~~~~~~~g~~~~i~~l~~G~~ 461 (821)
..+...++||+-+ .+.-...+++|+|++|+..+.. ++.+ ..+++||+
T Consensus 37 ~~~~~~v~pg~~~~~~~H~~~dE~~~Vl~G~g~v~~---~~~~---~~v~~gd~ 84 (127)
T COG0662 37 SIARILVKPGEEISLHHHHHRDEHWYVLEGTGKVTI---GGEE---VEVKAGDS 84 (127)
T ss_pred EEEEEEECCCcccCcccccCcceEEEEEeeEEEEEE---CCEE---EEecCCCE
Confidence 3455677777774 4444457899999999998876 3333 23667774
No 220
>KOG1709 consensus Guanidinoacetate methyltransferase and related proteins [Amino acid transport and metabolism]
Probab=28.14 E-value=46 Score=32.18 Aligned_cols=39 Identities=31% Similarity=0.296 Sum_probs=20.8
Q ss_pred HHCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHcCCC
Q 003425 656 LSNGIDPNTRDYDLRTPLHVAASEGLYLMAKLLVEAGAS 694 (821)
Q Consensus 656 l~~g~~~~~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~ga~ 694 (821)
+++|+--|..|....||=.+|.+.|+.+..+.|++.|+.
T Consensus 2 le~ga~wn~id~~n~t~gd~a~ern~~rly~~lv~~gv~ 40 (271)
T KOG1709|consen 2 LEYGAGWNFIDYENKTVGDLALERNQSRLYRRLVEAGVP 40 (271)
T ss_pred cccCCCccccChhhCCchHHHHHccHHHHHHHHHHcCCc
Confidence 344555555555555555555555555555555555543
No 221
>PF10011 DUF2254: Predicted membrane protein (DUF2254); InterPro: IPR018723 Members of this family of proteins comprises various hypothetical and putative membrane proteins. Their exact function, has not, as yet, been defined.
Probab=28.03 E-value=2.5e+02 Score=30.43 Aligned_cols=56 Identities=16% Similarity=0.303 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHHHHhhccccCccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003425 263 WKSYITSMYASVVTMTTVGYGDVHAVNLREMVFIMIYVSFDMILGAYLIGNMTALI 318 (821)
Q Consensus 263 ~~~Y~~s~yw~~~t~tTvGyGdi~p~t~~e~~~~~~~~i~g~~~~a~~i~~i~~~~ 318 (821)
.-.|+-+|-|++..+.+++-++..........+++++.+++++.+.+.|..++..+
T Consensus 98 Lg~Figtfvy~l~~l~~i~~~~~~~~p~~~~~~a~~l~i~~v~~li~fI~~i~~~i 153 (371)
T PF10011_consen 98 LGTFIGTFVYSLLVLIAIRSGDYGSVPRLSVFIALALAILSVVLLIYFIHHIARSI 153 (371)
T ss_pred HHHHHHHHHHHHHHHHHccccccccCcchHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 44688999999999999886665333334466777777888888888888877766
No 222
>KOG4390 consensus Voltage-gated A-type K+ channel KCND [Inorganic ion transport and metabolism]
Probab=27.70 E-value=30 Score=36.05 Aligned_cols=17 Identities=6% Similarity=0.387 Sum_probs=9.9
Q ss_pred HHHHHHHHHHhcCchhH
Q 003425 309 YLIGNMTALIVKGSKTE 325 (821)
Q Consensus 309 ~~i~~i~~~~~~~~~~~ 325 (821)
.++++++.+..++.+..
T Consensus 404 vIVSNFSRIYHQNQRAD 420 (632)
T KOG4390|consen 404 VIVSNFSRIYHQNQRAD 420 (632)
T ss_pred EEEechhHHHhhhhhhh
Confidence 35667777766654443
No 223
>PF02037 SAP: SAP domain; InterPro: IPR003034 The SAP (after SAF-A/B, Acinus and PIAS) motif is a putative DNA binding domain found in diverse nuclear proteins involved in chromosomal organisation [], including in apoptosis []. In yeast, SAP is found in the most distal N-terminal region of E3 SUMO-protein ligase SIZ1, where it is involved in nuclear localization [].; GO: 0003676 nucleic acid binding; PDB: 2RNN_A 1JEQ_A 2KW9_A 2KVU_A 2DO1_A 1ZBU_B 1ZBH_A 2DO5_A 2RNO_A 1H1J_S ....
Probab=27.63 E-value=1.4e+02 Score=19.51 Aligned_cols=26 Identities=15% Similarity=0.391 Sum_probs=19.2
Q ss_pred HHHHHHHHHHhCCCC-----HHHHHHHHHHH
Q 003425 330 KMTDLMKYINRNRLG-----RDIRDQIIGHL 355 (821)
Q Consensus 330 ~~~~~~~~m~~~~lp-----~~l~~ri~~y~ 355 (821)
+..++.++++.+++| .+|.+|+.+|+
T Consensus 5 ~v~eLk~~l~~~gL~~~G~K~~Li~Rl~~~l 35 (35)
T PF02037_consen 5 TVAELKEELKERGLSTSGKKAELIERLKEHL 35 (35)
T ss_dssp HHHHHHHHHHHTTS-STSSHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHCCCCCCCCHHHHHHHHHHhC
Confidence 356788899999988 56888888764
No 224
>PF14377 DUF4414: Domain of unknown function (DUF4414)
Probab=26.89 E-value=1.2e+02 Score=26.00 Aligned_cols=46 Identities=20% Similarity=0.319 Sum_probs=30.9
Q ss_pred CCCHHHHHHHHHHHHHHhh-----c----c------ccHHHHHhhCcHHHHHHHHHhhhhh
Q 003425 342 RLGRDIRDQIIGHLRLQYE-----S----S------YTEASVLQDIPISIRAKISQTLYLP 387 (821)
Q Consensus 342 ~lp~~l~~ri~~y~~~~~~-----~----~------~~~~~~l~~lp~~L~~~i~~~~~~~ 387 (821)
-||.++|..|..-+...-. + . .-..++|..||++||.||.......
T Consensus 8 aLPeDiR~Evl~~~~~~~~~~~~~~~~~~~~~~~~~~I~pefL~ALP~diR~EVl~qe~~~ 68 (108)
T PF14377_consen 8 ALPEDIREEVLAQQQRERRAQASQRQSPQSSAPQPSQIDPEFLAALPPDIREEVLAQERRE 68 (108)
T ss_pred HCCHHHHHHHHHHHHhhccchhcccCcccccCCCccccCHHHHHhCCHHHHHHHHHHHHHH
Confidence 3799999988655443211 0 0 1136899999999999987765433
No 225
>TIGR00934 2a38euk potassium uptake protein, Trk family. The proteins of the Trk family are derived from Gram-negative and Gram-positive bacteria, yeast and wheat. The proteins of E. coli K12 TrkH and TrkG as well as several yeast proteins have been functionally characterized.The E. coli TrkH and TrkG proteins are complexed to two peripheral membrane proteins, TrkA, an NAD-binding protein, and TrkE, an ATP-binding protein. This complex forms the potassium uptake system. This family is specific for the eukaryotic Trk system.
Probab=26.82 E-value=3.7e+02 Score=31.97 Aligned_cols=93 Identities=4% Similarity=0.093 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCceeccccCCCCCcccccccchHHHHHHHHHHHHHHhhccccCc
Q 003425 205 MFSRIVKLIAVELYCSHIAACIFYYLATTLPPEQEGYTWIGSLKMGDYSYADFREIGFWKSYITSMYASVVTMTTVGYGD 284 (821)
Q Consensus 205 ~~~~~~~~~~~~l~~~h~~ac~~~~i~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~Y~~s~yw~~~t~tTvGyGd 284 (821)
...-+.+++..+++..|+++++.......... .|.+.-...-......|+|-++.+....|+ +
T Consensus 447 aLk~L~~Iv~~Y~~~~~llG~i~l~~wi~~~~----------------~~~~~l~~~gin~~W~aiFhAVSAFnNAGF-s 509 (800)
T TIGR00934 447 ALKCLCSIVLVYFLGFNILGFVLLLPWINHVK----------------TYSEVVRSKGVSPTWWGFFTAMSAFANLGL-T 509 (800)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc----------------cHHHHHhhcCccHHHHHHHHHHHHHhcCCC-C
Confidence 33346677777888899998876543321110 011110111112455678888888888887 4
Q ss_pred cccCCh-------hHHHHHHHHHHHHHHHHHHHHHHH
Q 003425 285 VHAVNL-------REMVFIMIYVSFDMILGAYLIGNM 314 (821)
Q Consensus 285 i~p~t~-------~e~~~~~~~~i~g~~~~a~~i~~i 314 (821)
..|.+- .-.++.++.+++|-+.|..+.-.+
T Consensus 510 L~~dSM~~F~~~~~vllvm~~LIi~GntGFPVllrli 546 (800)
T TIGR00934 510 LTPESMVSFNKNSYLLLLMIWFIIIGNTGFPIFLRLI 546 (800)
T ss_pred cCCCcchhhccCccHHHHHHHHHHHcccchHHHHHHH
Confidence 444332 223344455555555555544433
No 226
>PLN03077 Protein ECB2; Provisional
Probab=26.41 E-value=6e+02 Score=31.14 Aligned_cols=113 Identities=12% Similarity=0.019 Sum_probs=51.9
Q ss_pred hhHHHHhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHH-HHcCCHHH----HHHHHHcCCCCCCCCCCCCcHHHHHHHc
Q 003425 541 LKVNSAAYHGDLYQLEGLIRAGADPNRTDYDGRSPLHLA-ASRGYEEI----MTFLIQKGVDINLKDNFGNTPLLEAIKY 615 (821)
Q Consensus 541 ~~L~~A~~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A-~~~g~~~~----v~~Ll~~g~~~~~~~~~g~tpL~~A~~~ 615 (821)
+.+..-++.|+.+.+..+.+.-..+ |...++.+..+ ++.|..+- .+.+.+.|..|+.... .+.+...+..
T Consensus 328 ~Li~~y~k~g~~~~A~~vf~~m~~~---d~~s~n~li~~~~~~g~~~~A~~lf~~M~~~g~~Pd~~t~--~~ll~a~~~~ 402 (857)
T PLN03077 328 SLIQMYLSLGSWGEAEKVFSRMETK---DAVSWTAMISGYEKNGLPDKALETYALMEQDNVSPDEITI--ASVLSACACL 402 (857)
T ss_pred HHHHHHHhcCCHHHHHHHHhhCCCC---CeeeHHHHHHHHHhCCCHHHHHHHHHHHHHhCCCCCceeH--HHHHHHHhcc
Confidence 3344445566666666665543222 22233443332 34454432 2223334544443221 1233444445
Q ss_pred CChHHHHH----HHhcCCCCCcccccchhhHHHhcCCHHHHHHHHHC
Q 003425 616 GNDGAASL----LVKEGASLNVEEAGSFLCTAVARGDSDLLKRVLSN 658 (821)
Q Consensus 616 ~~~~~v~~----Ll~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~ 658 (821)
|..+.+.. ..+.|..++..-.++.+...++.|+.+-+..+++.
T Consensus 403 g~~~~a~~l~~~~~~~g~~~~~~~~n~Li~~y~k~g~~~~A~~vf~~ 449 (857)
T PLN03077 403 GDLDVGVKLHELAERKGLISYVVVANALIEMYSKCKCIDKALEVFHN 449 (857)
T ss_pred chHHHHHHHHHHHHHhCCCcchHHHHHHHHHHHHcCCHHHHHHHHHh
Confidence 55444333 33345544444444555566667777666666553
No 227
>KOG0500 consensus Cyclic nucleotide-gated cation channel CNGA1-3 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=26.21 E-value=9.4e+02 Score=26.78 Aligned_cols=56 Identities=14% Similarity=0.288 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHhhccccHHHHHhhCcHHHHHHHHHhh-----hhhhccccccccCCCHHHHHHHHHhcccccc
Q 003425 348 RDQIIGHLRLQYESSYTEASVLQDIPISIRAKISQTL-----YLPYIEKVPLFKGCSSEFINQIVIRLHEEFF 415 (821)
Q Consensus 348 ~~ri~~y~~~~~~~~~~~~~~l~~lp~~L~~~i~~~~-----~~~~l~~~~~f~~~~~~~l~~l~~~~~~~~~ 415 (821)
..-++.|++|+ .+|..|+..+...- ..+........+.+|+....+|+.....-+.
T Consensus 249 mDGiK~YM~~R------------kV~~~lq~rVikwfdYlwa~~~~~DEeevl~~LP~kL~aeIA~nvh~dTL 309 (536)
T KOG0500|consen 249 MDGIKQYMRYR------------KVPKALQTRVIKWFDYLWAHKKIVDEEEVLKLLPDKLKAEIAINVHLDTL 309 (536)
T ss_pred HHHHHHHHHHh------------cccHHHHHHHHHHHHHHHhccccccHHHHHHhCCHHHHhHhHHHHHHHHH
Confidence 35577788766 56777776654431 2233344456667888888888776554433
No 228
>COG3718 IolB Uncharacterized enzyme involved in inositol metabolism [Carbohydrate transport and metabolism]
Probab=26.12 E-value=2.1e+02 Score=28.11 Aligned_cols=67 Identities=16% Similarity=0.191 Sum_probs=41.0
Q ss_pred cccccccccCeEEccCCccCeEEEEEeeEEEEEeeccCCccceEEEeCCCCccccc----cccccC---------CcceE
Q 003425 410 LHEEFFLPGEVIMEKGNVVDQLYFVCLGKLEEVGIEENGTEDYVSYLHPNSSFGEV----SILCNI---------PQPYT 476 (821)
Q Consensus 410 ~~~~~~~~~e~I~~~g~~~~~ly~I~~G~v~~~~~~~~g~~~~i~~l~~G~~fGe~----~~~~~~---------~~~~~ 476 (821)
++...+.+|+..-.+-........++.|++.+.. .|+.||++ +.|.+. .+.++
T Consensus 31 F~~~~L~~Ges~~~~~~~~E~clV~v~Gk~~vs~--------------~g~~f~~iG~R~SvFe~~p~~~vYvp~g~~~~ 96 (270)
T COG3718 31 FRLLRLAAGESATEETGDRERCLVLVTGKATVSA--------------HGSTFGEIGTRMSVFERKPPDSVYVPAGSAFS 96 (270)
T ss_pred EEEEEccCCCcccccCCCceEEEEEEeeeEEEee--------------ccchHhhcccccccccCCCCCeEEecCCceEE
Confidence 3445667787765554445556677889887654 23333333 244443 35688
Q ss_pred EEEecceEEEEech
Q 003425 477 VQVCELCRLLRIDK 490 (821)
Q Consensus 477 ~~a~~~~~~~~i~~ 490 (821)
+.|.+++++...+.
T Consensus 97 vtA~t~~~vAvC~A 110 (270)
T COG3718 97 VTATTDLEVAVCSA 110 (270)
T ss_pred EEeecceEEEEEeC
Confidence 99999988776544
No 229
>PF08475 Baculo_VP91_N: Viral capsid protein 91 N-terminal; InterPro: IPR013682 This domain is found in Baculoviridae including the nucleopolyhedrovirus at the N terminus of the viral capsid protein 91 (VP91) [].
Probab=24.58 E-value=1.2e+02 Score=28.60 Aligned_cols=37 Identities=16% Similarity=0.288 Sum_probs=25.7
Q ss_pred HHHHHHHHhcCchhHHHHHHHHHHHHHHHhCC----CCHHH
Q 003425 311 IGNMTALIVKGSKTEKFRDKMTDLMKYINRNR----LGRDI 347 (821)
Q Consensus 311 i~~i~~~~~~~~~~~~~~~~~~~~~~~m~~~~----lp~~l 347 (821)
+..+--++........|.++++-+.+||++.+ +|+.|
T Consensus 12 f~i~y~~I~~dFde~~F~~rL~Vl~EYlkrtna~~p~P~~L 52 (183)
T PF08475_consen 12 FLIYYLIIYNDFDENEFDNRLQVLTEYLKRTNADHPLPDVL 52 (183)
T ss_pred HHHHHHhhccccchHHHHHHHHHHHHHHHhcCCCCCCCCee
Confidence 33333344556677889999999999999843 55554
No 230
>PRK09108 type III secretion system protein HrcU; Validated
Probab=24.44 E-value=8.4e+02 Score=26.15 Aligned_cols=61 Identities=7% Similarity=0.089 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhc-CchhHHHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 003425 293 MVFIMIYVSFDMILGAYLIGNMTALIVK-GSKTEKFRDKMTDLMKYINRNRLGRDIRDQIIG 353 (821)
Q Consensus 293 ~~~~~~~~i~g~~~~a~~i~~i~~~~~~-~~~~~~~~~~~~~~~~~m~~~~lp~~l~~ri~~ 353 (821)
.+...+..++..++.++++-.+.++..+ ..-.++.+-..+++++-+|...=++.++.|+++
T Consensus 180 ~~~~~~~~l~~~~~~~~~via~~D~~~qr~~~~k~lkMSkqEvK~E~K~~EGdP~iK~rrRq 241 (353)
T PRK09108 180 ILWTVLMKLLAVAAGVFLLVGAADWKIQRWLFIRDNRMSKDEVKREHKESEGDPHIKGERKR 241 (353)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHhccCCHHHHHHHHH
Confidence 3444444445555555555445554433 222222222234566666666667776666654
No 231
>PRK08156 type III secretion system protein SpaS; Validated
Probab=23.62 E-value=7.4e+02 Score=26.61 Aligned_cols=22 Identities=5% Similarity=0.087 Sum_probs=13.7
Q ss_pred HHHHHHHHhCCCCHHHHHHHHH
Q 003425 332 TDLMKYINRNRLGRDIRDQIIG 353 (821)
Q Consensus 332 ~~~~~~m~~~~lp~~l~~ri~~ 353 (821)
+++++-.+...=++.++.|+++
T Consensus 213 qEvKdE~Ke~EGdP~iK~r~R~ 234 (361)
T PRK08156 213 QEVKREYKEQEGNPEIKSKRRE 234 (361)
T ss_pred HHHHHHHHhccCCHHHHHHHHH
Confidence 4556666666666666666654
No 232
>COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain [Function unknown]
Probab=23.24 E-value=1.3e+02 Score=26.80 Aligned_cols=50 Identities=20% Similarity=0.092 Sum_probs=36.5
Q ss_pred cccccccccCeEEccCCc-cCeEEEEEeeEEEEEeeccCCccceEEEeCCCCccccc
Q 003425 410 LHEEFFLPGEVIMEKGNV-VDQLYFVCLGKLEEVGIEENGTEDYVSYLHPNSSFGEV 465 (821)
Q Consensus 410 ~~~~~~~~~e~I~~~g~~-~~~ly~I~~G~v~~~~~~~~g~~~~i~~l~~G~~fGe~ 465 (821)
+....+.||..+-..--+ .+...+|++|.+++.. +|.. ..+.+||++-..
T Consensus 45 ~~~v~~~~G~~~~~H~hp~~~~~~~Vl~G~~~~~~---~g~~---~~l~~Gd~i~ip 95 (131)
T COG1917 45 VVLVTFEPGAVIPWHTHPLGEQTIYVLEGEGTVQL---EGEK---KELKAGDVIIIP 95 (131)
T ss_pred EEEEEECCCcccccccCCCcceEEEEEecEEEEEe---cCCc---eEecCCCEEEEC
Confidence 345678888887776665 6789999999998776 3443 457899977643
No 233
>TIGR03404 bicupin_oxalic bicupin, oxalate decarboxylase family. Members of this protein family are defined as bicupins as they have two copies of the cupin domain (pfam00190). Two different known activities for members of this family are oxalate decarboxylase (EC 4.1.1.2) and oxalate oxidase (EC 1.2.3.4), although the latter activity has more often been found in distantly related monocupin (germin) proteins.
Probab=22.77 E-value=1.4e+02 Score=32.29 Aligned_cols=52 Identities=15% Similarity=0.222 Sum_probs=34.7
Q ss_pred ccccccccCeEEccCCccCeEEEEEeeEEEEEeeccCCccceEEEeCCCCccc
Q 003425 411 HEEFFLPGEVIMEKGNVVDQLYFVCLGKLEEVGIEENGTEDYVSYLHPNSSFG 463 (821)
Q Consensus 411 ~~~~~~~~e~I~~~g~~~~~ly~I~~G~v~~~~~~~~g~~~~i~~l~~G~~fG 463 (821)
....+.||...-..--...++.++++|++++...+.+|+. ....+++||+|=
T Consensus 70 ~~~~l~pG~~~~~HwH~~~E~~yVl~G~~~v~~~d~~g~~-~~~~L~~GD~~~ 121 (367)
T TIGR03404 70 VNMRLEPGAIRELHWHKEAEWAYVLYGSCRITAVDENGRN-YIDDVGAGDLWY 121 (367)
T ss_pred eEEEEcCCCCCCcccCCCceEEEEEeeEEEEEEEcCCCcE-EEeEECCCCEEE
Confidence 3456677765432222446899999999999876655554 334789999653
No 234
>TIGR03404 bicupin_oxalic bicupin, oxalate decarboxylase family. Members of this protein family are defined as bicupins as they have two copies of the cupin domain (pfam00190). Two different known activities for members of this family are oxalate decarboxylase (EC 4.1.1.2) and oxalate oxidase (EC 1.2.3.4), although the latter activity has more often been found in distantly related monocupin (germin) proteins.
Probab=22.73 E-value=1.4e+02 Score=32.30 Aligned_cols=51 Identities=10% Similarity=0.028 Sum_probs=35.3
Q ss_pred cccccccccCeEEcc-CCccCeEEEEEeeEEEEEeeccCCccceEEEeCCCCc
Q 003425 410 LHEEFFLPGEVIMEK-GNVVDQLYFVCLGKLEEVGIEENGTEDYVSYLHPNSS 461 (821)
Q Consensus 410 ~~~~~~~~~e~I~~~-g~~~~~ly~I~~G~v~~~~~~~~g~~~~i~~l~~G~~ 461 (821)
+....+.||...-.. -...+++++|++|++++...+.+|+... ..+++||.
T Consensus 247 ~~~~~l~PG~~~~~H~H~~~~E~~yvl~G~~~~~v~d~~g~~~~-~~l~~GD~ 298 (367)
T TIGR03404 247 AAIVTVEPGAMRELHWHPNADEWQYFIQGQARMTVFAAGGNART-FDYQAGDV 298 (367)
T ss_pred EEEEEECCCCccCCeeCcCCCeEEEEEEEEEEEEEEecCCcEEE-EEECCCCE
Confidence 445677787764332 2346789999999999887666665433 45899984
No 235
>PRK13109 flhB flagellar biosynthesis protein FlhB; Reviewed
Probab=22.68 E-value=9.1e+02 Score=25.92 Aligned_cols=57 Identities=5% Similarity=-0.033 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhc-CchhHHHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 003425 297 MIYVSFDMILGAYLIGNMTALIVK-GSKTEKFRDKMTDLMKYINRNRLGRDIRDQIIG 353 (821)
Q Consensus 297 ~~~~i~g~~~~a~~i~~i~~~~~~-~~~~~~~~~~~~~~~~~m~~~~lp~~l~~ri~~ 353 (821)
.+..+++.++.++++-.+.++..+ ..-.++.+-..+++++-++...=++.++.|+++
T Consensus 191 ~~~~l~~~~~~~~~via~~D~~~q~~~~~k~lkMSkqEVKdE~Ke~EGdP~iK~r~Rq 248 (358)
T PRK13109 191 VAIRLVSAVAIATIVLVALDLVWARFHWRRSLRMTKQEIKDEHKQAEGDPSVKARLRS 248 (358)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHhccCCHHHHHHHHH
Confidence 333344444444444444444322 222222222334566666777777777666664
No 236
>TIGR00328 flhB flagellar biosynthetic protein FlhB. FlhB and its functionally equivalent orthologs, from among a larger superfamily of proteins involved in type III protein export systems, are specifically involved in flagellar protein export. The seed members are restricted and the trusted cutoff is set high such that the proteins gathered by this model play roles specifically related to flagellar structures. Full-length homologs scoring below the trusted cutoff are involved in peptide export but not necessarily in the creation of flagella.
Probab=22.59 E-value=7.9e+02 Score=26.27 Aligned_cols=23 Identities=4% Similarity=0.167 Sum_probs=14.5
Q ss_pred HHHHHHHHHhCCCCHHHHHHHHH
Q 003425 331 MTDLMKYINRNRLGRDIRDQIIG 353 (821)
Q Consensus 331 ~~~~~~~m~~~~lp~~l~~ri~~ 353 (821)
.+++++-++...=++.++.|+++
T Consensus 217 kqEVKdE~K~~EGdP~iK~rrR~ 239 (347)
T TIGR00328 217 KQEVKDELKQSEGDPEVKGRIRQ 239 (347)
T ss_pred HHHHHHHHHhccCCHHHHHHHHH
Confidence 34566666666667776666664
No 237
>PRK04190 glucose-6-phosphate isomerase; Provisional
Probab=22.52 E-value=2.2e+02 Score=27.46 Aligned_cols=50 Identities=16% Similarity=0.180 Sum_probs=31.0
Q ss_pred cccccccCeE---------EccCCccCeEEEEEeeEEEEEeeccCCccceEEEeCCCCcc
Q 003425 412 EEFFLPGEVI---------MEKGNVVDQLYFVCLGKLEEVGIEENGTEDYVSYLHPNSSF 462 (821)
Q Consensus 412 ~~~~~~~e~I---------~~~g~~~~~ly~I~~G~v~~~~~~~~g~~~~i~~l~~G~~f 462 (821)
...+.||.+. +++.....++|++++|+..+...+.+|. .....+.+|+.+
T Consensus 72 ~t~l~PG~~g~e~~mt~gH~H~~~~~~EiyyvlsG~g~~~l~~~~G~-~~~~~v~pGd~v 130 (191)
T PRK04190 72 TTRLYPGKVGDEYFMTKGHFHAKADRAEIYYGLKGKGLMLLQDPEGE-ARWIEMEPGTVV 130 (191)
T ss_pred EEEECCCcEecccccCCCeEcCCCCCCEEEEEEeCEEEEEEecCCCc-EEEEEECCCCEE
Confidence 4456676642 2333334599999999988776444443 234457888853
No 238
>KOG3300 consensus NADH:ubiquinone oxidoreductase, B16.6 subunit/cell death-regulatory protein [Energy production and conversion; Cell cycle control, cell division, chromosome partitioning]
Probab=22.48 E-value=2.7e+02 Score=24.48 Aligned_cols=42 Identities=17% Similarity=0.253 Sum_probs=23.7
Q ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHHhhcc-ccHHHHHhhCcH
Q 003425 333 DLMKYINRNRLGRDIRDQIIGHLRLQYESS-YTEASVLQDIPI 374 (821)
Q Consensus 333 ~~~~~m~~~~lp~~l~~ri~~y~~~~~~~~-~~~~~~l~~lp~ 374 (821)
+++.|--++-+-+-|+..--+++-.++.++ ..|.+++++.|.
T Consensus 64 kiEd~~a~nai~PiL~AErDr~~l~~lrkn~eeEaeiMKdVPg 106 (146)
T KOG3300|consen 64 KIEDYAARNAILPILQAERDRRFLSELRKNLEEEAEIMKDVPG 106 (146)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHccCCC
Confidence 344554555555555555555555555554 456778877764
No 239
>PRK13264 3-hydroxyanthranilate 3,4-dioxygenase; Provisional
Probab=22.20 E-value=1.4e+02 Score=28.19 Aligned_cols=60 Identities=13% Similarity=0.101 Sum_probs=38.8
Q ss_pred CccCeEEEEEeeEEEEEeeccCCccceEEEeCCCCccccccccccCCcceEEEEecceEEEEechHh
Q 003425 426 NVVDQLYFVCLGKLEEVGIEENGTEDYVSYLHPNSSFGEVSILCNIPQPYTVQVCELCRLLRIDKQS 492 (821)
Q Consensus 426 ~~~~~ly~I~~G~v~~~~~~~~g~~~~i~~l~~G~~fGe~~~~~~~~~~~~~~a~~~~~~~~i~~~~ 492 (821)
+..+++|++++|.+.+...+ +|+.. ...+.+||+|=-. .+.|.+- ++.++|..+.|.+..
T Consensus 52 ~~tdE~FyqleG~~~l~v~d-~g~~~-~v~L~eGd~fllP---~gvpHsP--~r~~~tv~LviE~~r 111 (177)
T PRK13264 52 DPGEEFFYQLEGDMYLKVQE-DGKRR-DVPIREGEMFLLP---PHVPHSP--QREAGSIGLVIERKR 111 (177)
T ss_pred CCCceEEEEECCeEEEEEEc-CCcee-eEEECCCCEEEeC---CCCCcCC--ccCCCeEEEEEEeCC
Confidence 45689999999998877644 44322 3458898866422 2444432 446788888886654
No 240
>PLN03077 Protein ECB2; Provisional
Probab=21.91 E-value=1.4e+03 Score=28.04 Aligned_cols=89 Identities=16% Similarity=0.067 Sum_probs=46.7
Q ss_pred HHHhcCCCCCcccccchhhHHHhcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHH-HHcCcHHHH----HHHHHcCCCCCC
Q 003425 623 LLVKEGASLNVEEAGSFLCTAVARGDSDLLKRVLSNGIDPNTRDYDLRTPLHVA-ASEGLYLMA----KLLVEAGASVFP 697 (821)
Q Consensus 623 ~Ll~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~T~Lh~A-~~~g~~~~v----~~Ll~~ga~~~~ 697 (821)
..++.|...+....+..+..-++.|+.+-...+.+.- ..|..-++.|..+ +..|..+-+ +.+.+.|..+|.
T Consensus 514 ~~~~~g~~~~~~~~naLi~~y~k~G~~~~A~~~f~~~----~~d~~s~n~lI~~~~~~G~~~~A~~lf~~M~~~g~~Pd~ 589 (857)
T PLN03077 514 HVLRTGIGFDGFLPNALLDLYVRCGRMNYAWNQFNSH----EKDVVSWNILLTGYVAHGKGSMAVELFNRMVESGVNPDE 589 (857)
T ss_pred HHHHhCCCccceechHHHHHHHHcCCHHHHHHHHHhc----CCChhhHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCCc
Confidence 3344565555555556666667777776665555542 2333344554443 466765443 334456766665
Q ss_pred CCCCCCCHHHHHHHcCCHHH
Q 003425 698 KDRWGNTPLDEGRMCGNKNL 717 (821)
Q Consensus 698 ~d~~g~t~l~~A~~~~~~~i 717 (821)
... .+.+......|..+-
T Consensus 590 ~T~--~~ll~a~~~~g~v~e 607 (857)
T PLN03077 590 VTF--ISLLCACSRSGMVTQ 607 (857)
T ss_pred ccH--HHHHHHHhhcChHHH
Confidence 432 123344445566543
No 241
>PF00190 Cupin_1: Cupin; InterPro: IPR006045 This family represents the conserved barrel domain of the 'cupin' superfamily ('cupa' is the Latin term for a small barrel). This family contains 11S and 7S plant seed storage proteins, and germins. Plant seed storage proteins provide the major nitrogen source for the developing plant. ; GO: 0045735 nutrient reservoir activity; PDB: 2E9Q_A 2EVX_A 1OD5_A 1UCX_A 1UD1_C 1FXZ_C 3KGL_C 3KSC_D 1UIJ_F 1IPK_B ....
Probab=21.87 E-value=1e+02 Score=27.95 Aligned_cols=52 Identities=17% Similarity=0.261 Sum_probs=35.1
Q ss_pred cccccccCeEEccCCccCeEEEEEeeEEEEEeeccCCc----cceEE--EeCCCCccc
Q 003425 412 EEFFLPGEVIMEKGNVVDQLYFVCLGKLEEVGIEENGT----EDYVS--YLHPNSSFG 463 (821)
Q Consensus 412 ~~~~~~~e~I~~~g~~~~~ly~I~~G~v~~~~~~~~g~----~~~i~--~l~~G~~fG 463 (821)
...+.||-...-.-..+..+++|.+|+..+....+++. ..... .+++||.|-
T Consensus 38 ~~~i~pg~~~~Ph~h~a~~i~~V~~G~~~~~~v~~~~~~~~~~~~~~~v~l~~Gdv~~ 95 (144)
T PF00190_consen 38 RVLIEPGGLRAPHYHNADEIVYVIEGRGRVGVVGPGGPQEEFRDFSQKVRLKAGDVFV 95 (144)
T ss_dssp EEEEETTEEEEEEEESSEEEEEEEESEEEEEEEETTCSSSEEEEEEEEEEEETTEEEE
T ss_pred eeehhcCCccceeEeeeeEEeeeeccceEEEEEecCCccccceeeeceeeeeccccee
Confidence 34457777765444477899999999999766666541 22223 489999765
No 242
>PRK12468 flhB flagellar biosynthesis protein FlhB; Reviewed
Probab=21.11 E-value=8.2e+02 Score=26.57 Aligned_cols=23 Identities=9% Similarity=0.127 Sum_probs=14.8
Q ss_pred HHHHHHHHHhCCCCHHHHHHHHH
Q 003425 331 MTDLMKYINRNRLGRDIRDQIIG 353 (821)
Q Consensus 331 ~~~~~~~m~~~~lp~~l~~ri~~ 353 (821)
.+++++-++...=++.++.|+++
T Consensus 224 kqEvKdE~K~~EGdP~iK~r~Rq 246 (386)
T PRK12468 224 KQDIRDEFKNQEGDPHVKGRIRQ 246 (386)
T ss_pred HHHHHHHHHhccCCHHHHHHHHH
Confidence 34566666776777777666664
No 243
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=21.03 E-value=1.2e+03 Score=26.17 Aligned_cols=51 Identities=12% Similarity=0.318 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCCCCCCceeccccCCCCCcccccccchHHHHHHH-HHHHHHHhhccccCccccCChhH
Q 003425 214 AVELYCSHIAACIFYYLATTLPPEQEGYTWIGSLKMGDYSYADFREIGFWKSYITS-MYASVVTMTTVGYGDVHAVNLRE 292 (821)
Q Consensus 214 ~~~l~~~h~~ac~~~~i~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~Y~~s-~yw~~~t~tTvGyGdi~p~t~~e 292 (821)
..+.++.+|..+++|..+. .|....-| ++|+.. .|++......
T Consensus 121 ~~i~~~~~W~~~~FYv~~e-----------------------------lw~~~vvS~lFW~fa-------ndi~t~~qak 164 (472)
T TIGR00769 121 GFIAILRIWSFALFYVMAE-----------------------------LWGSVVLSLLFWGFA-------NQITTIDEAK 164 (472)
T ss_pred HHHHHHhhhhHHHHHHHHH-----------------------------HHHHHHHHHHHHHHH-------HhcCCHHHHH
Confidence 4445777899999887763 36688888 999998 4888888899
Q ss_pred HHHHHHHH
Q 003425 293 MVFIMIYV 300 (821)
Q Consensus 293 ~~~~~~~~ 300 (821)
|.+..+..
T Consensus 165 Rfy~l~~~ 172 (472)
T TIGR00769 165 RFYALFGL 172 (472)
T ss_pred HHHHHHHH
Confidence 98877644
No 244
>PRK12721 secretion system apparatus protein SsaU; Reviewed
Probab=21.03 E-value=8.7e+02 Score=25.99 Aligned_cols=60 Identities=12% Similarity=0.160 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhc-CchhHHHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 003425 294 VFIMIYVSFDMILGAYLIGNMTALIVK-GSKTEKFRDKMTDLMKYINRNRLGRDIRDQIIG 353 (821)
Q Consensus 294 ~~~~~~~i~g~~~~a~~i~~i~~~~~~-~~~~~~~~~~~~~~~~~m~~~~lp~~l~~ri~~ 353 (821)
+...+..+++.++.++++-.+.++..+ ..-.++.+-..+++++-.|...=++.++.|+++
T Consensus 179 ~~~~~~~l~~~~~~~~~via~~D~~~qr~~~~k~lkMskqEvKdE~Ke~EGdP~iK~rrR~ 239 (349)
T PRK12721 179 VSTLIFWLWGGLLACYLVFGILDYSFQRYKIMKQLKMSKDDVKQEYKDSEGDPEIKQKRRE 239 (349)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHhccCCHHHHHHHHH
Confidence 333344444444444444444444422 211222222234566666666667777666664
No 245
>PF11151 DUF2929: Protein of unknown function (DUF2929); InterPro: IPR021324 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=20.84 E-value=75 Score=23.67 Aligned_cols=18 Identities=33% Similarity=0.645 Sum_probs=14.2
Q ss_pred HHHHHHHHHHHHhhcccc
Q 003425 265 SYITSMYASVVTMTTVGY 282 (821)
Q Consensus 265 ~Y~~s~yw~~~t~tTvGy 282 (821)
+|+.+++|++.-.--+||
T Consensus 2 kyivt~fWs~il~~vvgy 19 (57)
T PF11151_consen 2 KYIVTFFWSFILGEVVGY 19 (57)
T ss_pred cEEehhHHHHHHHHHHHH
Confidence 477888998887777776
No 246
>PRK05702 flhB flagellar biosynthesis protein FlhB; Reviewed
Probab=20.79 E-value=8.9e+02 Score=26.02 Aligned_cols=22 Identities=5% Similarity=0.120 Sum_probs=12.9
Q ss_pred HHHHHHHHhCCCCHHHHHHHHH
Q 003425 332 TDLMKYINRNRLGRDIRDQIIG 353 (821)
Q Consensus 332 ~~~~~~m~~~~lp~~l~~ri~~ 353 (821)
+++++-.+...=++.++.|+++
T Consensus 225 qEVKdE~Ke~EGdP~iK~rrR~ 246 (359)
T PRK05702 225 QEVKDEHKQSEGDPEVKGRIRQ 246 (359)
T ss_pred HHHHHHHHhccCCHHHHHHHHH
Confidence 3555555666666666666553
No 247
>COG1226 Kch Kef-type K+ transport systems, predicted NAD-binding component [Inorganic ion transport and metabolism]
Probab=20.62 E-value=57 Score=31.29 Aligned_cols=36 Identities=19% Similarity=0.213 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHhhccccCccccCChhHHHHHHHHHH
Q 003425 266 YITSMYASVVTMTTVGYGDVHAVNLREMVFIMIYVS 301 (821)
Q Consensus 266 Y~~s~yw~~~t~tTvGyGdi~p~t~~e~~~~~~~~i 301 (821)
+..+.||+..+++++|||++.|.+..........++
T Consensus 118 ~~~~~~~~~~~l~~~G~~~vi~~~~~~~~~~~~~~~ 153 (212)
T COG1226 118 RARDLDEAVETLTTVGADEVVPPTFESALLLARAAL 153 (212)
T ss_pred EeccchHHHHHHHHcCCCeeecHHHHHHHHHHHHHh
Confidence 346678999999999999998887665544443333
No 248
>KOG3836 consensus HLH transcription factor EBF/Olf-1 and related DNA binding proteins [Transcription]
Probab=20.48 E-value=27 Score=39.07 Aligned_cols=56 Identities=36% Similarity=0.485 Sum_probs=42.9
Q ss_pred HhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCC
Q 003425 546 AAYHGDLYQLEGLIRAGADPNRTDYDGRSPLHLAASRGYEEIMTFLIQKGVDINLK 601 (821)
Q Consensus 546 A~~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~ 601 (821)
|+.++....+-.|++.|+.++..|..|.+|+|+++..|..++.+.++....+.+..
T Consensus 403 ~~~~~~ss~v~~lik~~~~~~~~d~f~~~p~~~~~~sgdp~~~~~~~~~~~~~~~~ 458 (605)
T KOG3836|consen 403 AALNNSSSLVFTLIKKGAHPNDDDKFGFTPLHIPQISGDPRIIQLLLNCKVAISLK 458 (605)
T ss_pred hhhcCCccceeeeecccCccchhcccccccccccCCCCCHHHhhhhhhhhhhhhcc
Confidence 55666666666777888888888888999999999999998888887765444433
No 249
>PRK02463 OxaA-like protein precursor; Provisional
Probab=20.34 E-value=1e+03 Score=24.98 Aligned_cols=18 Identities=11% Similarity=0.082 Sum_probs=9.5
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 003425 209 IVKLIAVELYCSHIAACI 226 (821)
Q Consensus 209 ~~~~~~~~l~~~h~~ac~ 226 (821)
++.+.+.+.+++...||.
T Consensus 8 ~~~~~~~~~~~~~lsgc~ 25 (307)
T PRK02463 8 ILFSGLALSMLLTLTGCV 25 (307)
T ss_pred HHHHHHHHHHHHHHhccC
Confidence 333444444555566775
Done!