BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003426
(821 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FPT1|UBP12_ARATH Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana
GN=UBP12 PE=1 SV=2
Length = 1116
Score = 1456 bits (3768), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 708/805 (87%), Positives = 752/805 (93%), Gaps = 5/805 (0%)
Query: 1 MTMMTPPPLDQ-EEEEMLVPHSDIVEGP-QPMEVVSQVEPASTVENQQVEDPPTMKFTWT 58
MTMMTPPP+DQ E+EEMLVP+SD+V+GP QPMEV ASTVENQ EDPPT+KFTWT
Sbjct: 1 MTMMTPPPVDQPEDEEMLVPNSDLVDGPAQPMEVTQPETAASTVENQPAEDPPTLKFTWT 60
Query: 59 IENFSRLNTKKHYSDVFVVGGYKWRILIFPKGNNVDHLSMYLDVADSGTLPYGWSRYAQF 118
I NFSR NT+KHYSDVFVVGGYKWRILIFPKGNNVDHLSMYLDV+D+ +LPYGWSRYAQF
Sbjct: 61 IPNFSRQNTRKHYSDVFVVGGYKWRILIFPKGNNVDHLSMYLDVSDAASLPYGWSRYAQF 120
Query: 119 SLAVVNQIHSKYSIRKDTQHQFNARESDWGFTSFMPLGDLYDPSRGYLVNDSVVVEAEVA 178
SLAVVNQIH++Y++RK+TQHQFNARESDWGFTSFMPL +LYDPSRGYLVND+V+VEAEVA
Sbjct: 121 SLAVVNQIHTRYTVRKETQHQFNARESDWGFTSFMPLSELYDPSRGYLVNDTVLVEAEVA 180
Query: 179 VRKVLDYWSYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDLPSG 238
VRKVLDYWSYDSKKETG+VGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTEND P+
Sbjct: 181 VRKVLDYWSYDSKKETGFVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDAPTA 240
Query: 239 SIPLALQSLFYKLQYNDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGT 298
SIPLALQSLFYKLQYNDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGT
Sbjct: 241 SIPLALQSLFYKLQYNDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGT 300
Query: 299 VVEGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERLE 358
VVEGTIQQLFEGHHMNYIECINVD+KSTRKESFYDLQLDVKGC+DVYASFDKYVEVERLE
Sbjct: 301 VVEGTIQQLFEGHHMNYIECINVDFKSTRKESFYDLQLDVKGCKDVYASFDKYVEVERLE 360
Query: 359 GDNKYHAEEHGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDAMVKINDRYEFPLQLDLD 418
GDNKYHAE HGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRD MVKINDRYEFPL+LDLD
Sbjct: 361 GDNKYHAEGHGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLELDLD 420
Query: 419 RENGKYLSPDADRSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKED 478
RE+GKYLSPDADRSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKED
Sbjct: 421 REDGKYLSPDADRSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKED 480
Query: 479 VKRALEEQYGGEEELPPTNPGFNNT-PFKFTKYSNAYMLVYIRESDKDKIICNVDEKDIA 537
+KRALEEQYGGEEELP TNPGFNN PFKFTKYSNAYMLVYIRESDKDKIICNVDEKDIA
Sbjct: 481 LKRALEEQYGGEEELPQTNPGFNNNPPFKFTKYSNAYMLVYIRESDKDKIICNVDEKDIA 540
Query: 538 EHLRIRLKKEQEEKEDKRRYKAQAHLYTIIKVARDEDLAEQIGRDIYFDLVDHDKVRSFR 597
EHLR+RLKKEQEEKEDKRRYKAQAHLYTIIKVARDEDL EQIG+DIYFDLVDHDKVRSFR
Sbjct: 541 EHLRVRLKKEQEEKEDKRRYKAQAHLYTIIKVARDEDLKEQIGKDIYFDLVDHDKVRSFR 600
Query: 598 VQKQTSFMAFKEEIAKEFGIPIQLQRFWIWAKRQNHTYRPNRPLLPQEEAQTVGQLREVS 657
+QKQT F FKEE+AKEFG+P+QLQRFWIWAKRQNHTYRPNRPL PQEE Q VGQ+RE S
Sbjct: 601 IQKQTPFQQFKEEVAKEFGVPVQLQRFWIWAKRQNHTYRPNRPLTPQEELQPVGQIREAS 660
Query: 658 NKTHTAELRLFLEVEFGPDLHPIAPPDKSKDDILLFFKLYDPEKGELRYVGRLFLKSSSK 717
NK +TAEL+LFLEVE DL PI PP+KSK+DILLFFKLYDPEK L Y GRL +KSSSK
Sbjct: 661 NKANTAELKLFLEVEHL-DLRPIPPPEKSKEDILLFFKLYDPEKAVLSYAGRLMVKSSSK 719
Query: 718 PIEILRKLNQMAGFDPDEEIELYEEIKFEPCVMCEHLDKRTSFRLSQIEDGDIICFQKSP 777
P++I KLN+M GF PDEEIEL+EEIKFEPCVMCEHLDK+TSFRL QIEDGDIICFQK P
Sbjct: 720 PMDITGKLNEMVGFAPDEEIELFEEIKFEPCVMCEHLDKKTSFRLCQIEDGDIICFQK-P 778
Query: 778 PLESEQECRYPDVPSFLEYVHNRQV 802
+ E EC YP VPSFLEYV NRQ+
Sbjct: 779 LVNKEIECLYPAVPSFLEYVQNRQL 803
>sp|Q84WU2|UBP13_ARATH Ubiquitin carboxyl-terminal hydrolase 13 OS=Arabidopsis thaliana
GN=UBP13 PE=1 SV=1
Length = 1115
Score = 1431 bits (3703), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 690/804 (85%), Positives = 752/804 (93%), Gaps = 4/804 (0%)
Query: 1 MTMMTPPPLDQEE-EEMLVPHSDIVEGPQPMEVVSQVEPAST-VENQQVEDPPTMKFTWT 58
MTMMTPPPLDQ+E EEMLVP+ D+VEGPQPMEV +Q +PA+T VEN EDPP++KFTWT
Sbjct: 1 MTMMTPPPLDQQEDEEMLVPNPDLVEGPQPMEV-AQTDPAATAVENPPPEDPPSLKFTWT 59
Query: 59 IENFSRLNTKKHYSDVFVVGGYKWRILIFPKGNNVDHLSMYLDVADSGTLPYGWSRYAQF 118
I F+RLNT+KHYSDVFVVGGYKWRILIFPKGNNVDHLSMYLDVAD+ LPYGWSRY+QF
Sbjct: 60 IPMFTRLNTRKHYSDVFVVGGYKWRILIFPKGNNVDHLSMYLDVADAANLPYGWSRYSQF 119
Query: 119 SLAVVNQIHSKYSIRKDTQHQFNARESDWGFTSFMPLGDLYDPSRGYLVNDSVVVEAEVA 178
SLAVVNQ++++YSIRK+TQHQFNARESDWGFTSFMPL +LY+P+RGYLVND+V++EAEVA
Sbjct: 120 SLAVVNQVNNRYSIRKETQHQFNARESDWGFTSFMPLSELYEPTRGYLVNDTVLIEAEVA 179
Query: 179 VRKVLDYWSYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDLPSG 238
VRKVLDYWSYDSKKETG+VGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTEND P+
Sbjct: 180 VRKVLDYWSYDSKKETGFVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDAPTA 239
Query: 239 SIPLALQSLFYKLQYNDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGT 298
SIPLALQSLFYKLQYNDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGT
Sbjct: 240 SIPLALQSLFYKLQYNDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGT 299
Query: 299 VVEGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERLE 358
VVEGTIQ+LFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGC+DVYASFDKYVEVERLE
Sbjct: 300 VVEGTIQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCKDVYASFDKYVEVERLE 359
Query: 359 GDNKYHAEEHGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDAMVKINDRYEFPLQLDLD 418
GDNKYHAE H LQDAKKGVLFIDFPPVLQLQLKRFEYDFMRD MVKINDRYEFPLQLDLD
Sbjct: 360 GDNKYHAEGHDLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLD 419
Query: 419 RENGKYLSPDADRSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKED 478
RE+G+YLSPDAD+SVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKED
Sbjct: 420 REDGRYLSPDADKSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKED 479
Query: 479 VKRALEEQYGGEEELPPTNPGFNNTPFKFTKYSNAYMLVYIRESDKDKIICNVDEKDIAE 538
VKRALEEQYGGEEELP NPGFNN PFKFTKYSNAYMLVYIRESDKDKIICNVDEKDIAE
Sbjct: 480 VKRALEEQYGGEEELPQNNPGFNNPPFKFTKYSNAYMLVYIRESDKDKIICNVDEKDIAE 539
Query: 539 HLRIRLKKEQEEKEDKRRYKAQAHLYTIIKVARDEDLAEQIGRDIYFDLVDHDKVRSFRV 598
HLR+RLKKEQEEKEDKR+YKAQAHL+T IKVARD+D+ EQIG++IYFDLVDH+KVRSFR+
Sbjct: 540 HLRVRLKKEQEEKEDKRKYKAQAHLFTTIKVARDDDITEQIGKNIYFDLVDHEKVRSFRI 599
Query: 599 QKQTSFMAFKEEIAKEFGIPIQLQRFWIWAKRQNHTYRPNRPLLPQEEAQTVGQLREVSN 658
QKQT F FKEE+AKEFG+P+QLQRFWIWAKRQNHTYRPNRPL P EE QTVGQ+RE SN
Sbjct: 600 QKQTPFQQFKEEVAKEFGVPVQLQRFWIWAKRQNHTYRPNRPLSPNEELQTVGQIREASN 659
Query: 659 KTHTAELRLFLEVEFGPDLHPIAPPDKSKDDILLFFKLYDPEKGELRYVGRLFLKSSSKP 718
K + AEL+LFLE+E GPD PI PP+K+ +DILLFFKLYDPE LRYVGRL +KSSSKP
Sbjct: 660 KANNAELKLFLEIERGPDDLPIPPPEKTSEDILLFFKLYDPENAVLRYVGRLMVKSSSKP 719
Query: 719 IEILRKLNQMAGFDPDEEIELYEEIKFEPCVMCEHLDKRTSFRLSQIEDGDIICFQKSPP 778
++I+ +LN+MAGF PDEEIEL+EEIKFEPCVMCE +DK+TSFRL QIEDGDIIC+QK
Sbjct: 720 MDIVGQLNKMAGFAPDEEIELFEEIKFEPCVMCEQIDKKTSFRLCQIEDGDIICYQKPLS 779
Query: 779 LESEQECRYPDVPSFLEYVHNRQV 802
+E E E RYPDVPSFLEYV NR++
Sbjct: 780 IE-ESEFRYPDVPSFLEYVQNREL 802
>sp|Q4VSI4|UBP7_RAT Ubiquitin carboxyl-terminal hydrolase 7 OS=Rattus norvegicus
GN=Usp7 PE=1 SV=1
Length = 1103
Score = 512 bits (1319), Expect = e-144, Method: Compositional matrix adjust.
Identities = 307/751 (40%), Positives = 430/751 (57%), Gaps = 44/751 (5%)
Query: 55 FTWTIENFSRLNTKKHYSDVFVVGGYKWRILIFPK----GNNVDHLSMYLDVADSGTLPY 110
F +T+E FSRL+ FV W+I++ P+ + + +L ++ +
Sbjct: 72 FQFTVERFSRLSESVLSPPCFV-RNLPWKIMVMPRFYPDRPHQKSVGFFLQ-CNAESDST 129
Query: 111 GWSRYAQFSLAVVNQIHSKYSIRKDTQHQFNARESDWGFTSFMPLGDLYDPSRGYLVNDS 170
WS +AQ L ++N S + H F +E+DWGF++FM ++ DP +G++ +D
Sbjct: 130 SWSCHAQAVLKIINYRDDDKSFSRRISHLFFHKENDWGFSNFMAWSEVTDPEKGFIDDDK 189
Query: 171 VVVEAEVAVRKVLDYWSYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPT 230
V E V ++DSKK TGYVGLKNQGATCYMNSLLQTL+ RKAVY MPT
Sbjct: 190 VTFEVFVQADAPHGV-AWDSKKHTGYVGLKNQGATCYMNSLLQTLFFTNQLRKAVYMMPT 248
Query: 231 TENDLPSGSIPLALQSLFYKLQYNDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEK 290
E D S S+PLALQ +FY+LQ++D V TK+LTKSFGW+T DSFMQHDVQEL RVL +
Sbjct: 249 -EGDDSSKSVPLALQRVFYELQHSDKPVGTKKLTKSFGWETLDSFMQHDVQELCRVLLDN 307
Query: 291 LEDKMKGTVVEGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDK 350
+E+KMKGT VEGTI +LF G ++YI+C VDY+S R+E +YD+QL +KG ++++ SF
Sbjct: 308 VENKMKGTCVEGTIPKLFRGKMVSYIQCKEVDYRSDRREDYYDIQLSIKGKKNIFESFVD 367
Query: 351 YVEVERLEGDNKYHAEEHGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDAMVKINDRYE 410
YV VE+L+GDNKY A EHGLQ+A+KGV F+ PPVL LQL RF YD D +KINDR+E
Sbjct: 368 YVAVEQLDGDNKYDAGEHGLQEAEKGVKFLTLPPVLHLQLMRFMYDPQTDQNIKINDRFE 427
Query: 411 FPLQLDLDRENGKYLSPDADRSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFD 470
FP QL LD ++L + N Y LH+VLVHSG HGGHY ++ P +W KFD
Sbjct: 428 FPEQLPLD----EFLQKTDPKDPAN-YILHAVLVHSGDNHGGHYVVYLNPKGDGKWCKFD 482
Query: 471 DERVTKEDVKRALEEQYGGEEELPPTNPGFNNTPFKFTKYSNAYMLVYIRESDKDKIICN 530
D+ V++ + A+E YGG ++ +NAYMLVYIRES +++
Sbjct: 483 DDVVSRCTKEEAIEHNYGGHDD-----------DLSVRHCTNAYMLVYIRESKLSEVLQA 531
Query: 531 VDEKDIAEHLRIRLKKEQEEKEDKRRYKAQAHLYTIIKVARDEDLAEQIGRDIYFDLVDH 590
V + DI + L RL++E+ + KR+ + +AHLY +++ ++ G D+Y D
Sbjct: 532 VTDHDIPQQLVERLQEEKRIEAQKRKERQEAHLYMQVQIVAEDQFCGHQGNDMY----DE 587
Query: 591 DKVR--SFRVQKQTSFMAFKEEIAKEFGIPIQLQRFWIWAKRQNHTYRPNRPLLPQEEAQ 648
+KVR F+V K +S F + +++ G P R W R N T RP + EA
Sbjct: 588 EKVRYTVFKVLKNSSLAEFVQSLSQTMGFPQDQIRLWPMQARSNGT---KRPAMLDNEAD 644
Query: 649 TVGQLREVSNKTHTAELRLFLEVEFGPDLHPIAP--PDKSKD-DILLFFKLYDPEKGELR 705
+ E+S+ + +FLE P+L P KD D++LF K+YDP+ L
Sbjct: 645 GSKTMIELSDNENP--WTIFLET-VDPELAASGATLPKFDKDHDVMLFLKMYDPKTRSLN 701
Query: 706 YVGRLFLKSSSKPIEILRKLNQMAGFDPDEEIELYEEIKFEPCVMCEHLDKRTSFRLSQI 765
Y G ++ S K ++L + AGF D + LYEE+K + D L ++
Sbjct: 702 YCGHIYTPISCKIRDLLPVMCDRAGFIQDTSLILYEEVKPNLTERIQDYDVSLDKALDEL 761
Query: 766 EDGDIICFQKSPPLESEQECRYPDVPSFLEY 796
DGDII FQK P E +P+ EY
Sbjct: 762 MDGDIIVFQKDDPENDNSE-----LPTAKEY 787
>sp|Q6A4J8|UBP7_MOUSE Ubiquitin carboxyl-terminal hydrolase 7 OS=Mus musculus GN=Usp7
PE=1 SV=1
Length = 1103
Score = 511 bits (1317), Expect = e-144, Method: Compositional matrix adjust.
Identities = 307/751 (40%), Positives = 430/751 (57%), Gaps = 44/751 (5%)
Query: 55 FTWTIENFSRLNTKKHYSDVFVVGGYKWRILIFPK----GNNVDHLSMYLDVADSGTLPY 110
F +T+E FSRL+ FV W+I++ P+ + + +L ++ +
Sbjct: 72 FQFTVERFSRLSESVLSPPCFV-RNLPWKIMVMPRFYPDRPHQKSVGFFLQ-CNAESDST 129
Query: 111 GWSRYAQFSLAVVNQIHSKYSIRKDTQHQFNARESDWGFTSFMPLGDLYDPSRGYLVNDS 170
WS +AQ L ++N S + H F E+DWGF++FM ++ DP +G++ +D
Sbjct: 130 SWSCHAQAVLKIINYRDDDKSFSRRISHLFFHEENDWGFSNFMAWSEVTDPEKGFIDDDK 189
Query: 171 VVVEAEVAVRKVLDYWSYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPT 230
V E V ++DSKK TGYVGLKNQGATCYMNSLLQTL+ RKAVY MPT
Sbjct: 190 VTFEVFVQADAPHGV-AWDSKKHTGYVGLKNQGATCYMNSLLQTLFFTNQLRKAVYMMPT 248
Query: 231 TENDLPSGSIPLALQSLFYKLQYNDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEK 290
E D S S+PLALQ +FY+LQ++D V TK+LTKSFGW+T DSFMQHDVQEL RVL +
Sbjct: 249 -EGDDSSKSVPLALQRVFYELQHSDKPVGTKKLTKSFGWETLDSFMQHDVQELCRVLLDN 307
Query: 291 LEDKMKGTVVEGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDK 350
+E+KMKGT VEGTI +LF G ++YI+C +VDY+S R+E +YD+QL +KG ++++ SF
Sbjct: 308 VENKMKGTCVEGTIPKLFRGKMVSYIQCKDVDYRSDRREDYYDIQLSIKGKKNIFESFVD 367
Query: 351 YVEVERLEGDNKYHAEEHGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDAMVKINDRYE 410
YV VE+L+GDNKY A EHGLQ+A+KGV F+ PPVL LQL RF YD D +KINDR+E
Sbjct: 368 YVAVEQLDGDNKYDAGEHGLQEAEKGVKFLTLPPVLHLQLMRFMYDPQTDQNIKINDRFE 427
Query: 411 FPLQLDLDRENGKYLSPDADRSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFD 470
FP QL LD ++L + N Y LH+VLVHSG HGGHY ++ P +W KFD
Sbjct: 428 FPEQLPLD----EFLQKTDPKDPAN-YILHAVLVHSGDNHGGHYVVYLNPKGDGKWCKFD 482
Query: 471 DERVTKEDVKRALEEQYGGEEELPPTNPGFNNTPFKFTKYSNAYMLVYIRESDKDKIICN 530
D+ V++ + A+E YGG ++ +NAYMLVYIRES +++
Sbjct: 483 DDVVSRCTKEEAIEHNYGGHDD-----------DLSVRHCTNAYMLVYIRESKLSEVLQA 531
Query: 531 VDEKDIAEHLRIRLKKEQEEKEDKRRYKAQAHLYTIIKVARDEDLAEQIGRDIYFDLVDH 590
V + DI + L RL++E+ + KR+ + +AHLY +++ ++ G D+Y D
Sbjct: 532 VTDHDIPQQLVERLQEEKRIEAQKRKERQEAHLYMQVQIVAEDQFCGHQGNDMY----DE 587
Query: 591 DKVR--SFRVQKQTSFMAFKEEIAKEFGIPIQLQRFWIWAKRQNHTYRPNRPLLPQEEAQ 648
+KVR F+V K +S F + +++ G P R W R N T RP + EA
Sbjct: 588 EKVRYTVFKVLKNSSLAEFVQSLSQTMGFPQDQIRLWPMQARSNGT---KRPAMLDNEAD 644
Query: 649 TVGQLREVSNKTHTAELRLFLEVEFGPDLHPIAP--PDKSKD-DILLFFKLYDPEKGELR 705
+ E+S+ + +FLE P+L P KD D++LF K+YDP+ L
Sbjct: 645 GNKTMIELSDNENP--WTIFLET-VDPELAASGATLPKFDKDHDVMLFLKMYDPKTRSLN 701
Query: 706 YVGRLFLKSSSKPIEILRKLNQMAGFDPDEEIELYEEIKFEPCVMCEHLDKRTSFRLSQI 765
Y G ++ S K ++L + AGF D + LYEE+K + D L ++
Sbjct: 702 YCGHIYTPISCKIRDLLPVMCDRAGFIQDTSLILYEEVKPNLTERIQDYDVSLDKALDEL 761
Query: 766 EDGDIICFQKSPPLESEQECRYPDVPSFLEY 796
DGDII FQK P E +P+ EY
Sbjct: 762 MDGDIIVFQKDDPENDNSE-----LPTAKEY 787
>sp|Q93009|UBP7_HUMAN Ubiquitin carboxyl-terminal hydrolase 7 OS=Homo sapiens GN=USP7
PE=1 SV=2
Length = 1102
Score = 511 bits (1317), Expect = e-144, Method: Compositional matrix adjust.
Identities = 306/751 (40%), Positives = 431/751 (57%), Gaps = 44/751 (5%)
Query: 55 FTWTIENFSRLNTKKHYSDVFVVGGYKWRILIFPK----GNNVDHLSMYLDVADSGTLPY 110
F +T+E FSRL+ FV W+I++ P+ + + +L ++ +
Sbjct: 71 FQFTVERFSRLSESVLSPPCFV-RNLPWKIMVMPRFYPDRPHQKSVGFFLQ-CNAESDST 128
Query: 111 GWSRYAQFSLAVVNQIHSKYSIRKDTQHQFNARESDWGFTSFMPLGDLYDPSRGYLVNDS 170
WS +AQ L ++N + S + H F +E+DWGF++FM ++ DP +G++ +D
Sbjct: 129 SWSCHAQAVLKIINYRDDEKSFSRRISHLFFHKENDWGFSNFMAWSEVTDPEKGFIDDDK 188
Query: 171 VVVEAEVAVRKVLDYWSYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPT 230
V E V ++DSKK TGYVGLKNQGATCYMNSLLQTL+ RKAVY MPT
Sbjct: 189 VTFEVFVQADAPHGV-AWDSKKHTGYVGLKNQGATCYMNSLLQTLFFTNQLRKAVYMMPT 247
Query: 231 TENDLPSGSIPLALQSLFYKLQYNDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEK 290
E D S S+PLALQ +FY+LQ++D V TK+LTKSFGW+T DSFMQHDVQEL RVL +
Sbjct: 248 -EGDDSSKSVPLALQRVFYELQHSDKPVGTKKLTKSFGWETLDSFMQHDVQELCRVLLDN 306
Query: 291 LEDKMKGTVVEGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDK 350
+E+KMKGT VEGTI +LF G ++YI+C VDY+S R+E +YD+QL +KG ++++ SF
Sbjct: 307 VENKMKGTCVEGTIPKLFRGKMVSYIQCKEVDYRSDRREDYYDIQLSIKGKKNIFESFVD 366
Query: 351 YVEVERLEGDNKYHAEEHGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDAMVKINDRYE 410
YV VE+L+GDNKY A EHGLQ+A+KGV F+ PPVL LQL RF YD D +KINDR+E
Sbjct: 367 YVAVEQLDGDNKYDAGEHGLQEAEKGVKFLTLPPVLHLQLMRFMYDPQTDQNIKINDRFE 426
Query: 411 FPLQLDLDRENGKYLSPDADRSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFD 470
FP QL LD ++L + N Y LH+VLVHSG HGGHY ++ P +W KFD
Sbjct: 427 FPEQLPLD----EFLQKTDPKDPAN-YILHAVLVHSGDNHGGHYVVYLNPKGDGKWCKFD 481
Query: 471 DERVTKEDVKRALEEQYGGEEELPPTNPGFNNTPFKFTKYSNAYMLVYIRESDKDKIICN 530
D+ V++ + A+E YGG ++ +NAYMLVYIRES +++
Sbjct: 482 DDVVSRCTKEEAIEHNYGGHDD-----------DLSVRHCTNAYMLVYIRESKLSEVLQA 530
Query: 531 VDEKDIAEHLRIRLKKEQEEKEDKRRYKAQAHLYTIIKVARDEDLAEQIGRDIYFDLVDH 590
V + DI + L RL++E+ + KR+ + +AHLY +++ ++ G D+Y D
Sbjct: 531 VTDHDIPQQLVERLQEEKRIEAQKRKERQEAHLYMQVQIVAEDQFCGHQGNDMY----DE 586
Query: 591 DKVR--SFRVQKQTSFMAFKEEIAKEFGIPIQLQRFWIWAKRQNHTYRPNRPLLPQEEAQ 648
+KV+ F+V K +S F + +++ G P R W R N T RP + EA
Sbjct: 587 EKVKYTVFKVLKNSSLAEFVQSLSQTMGFPQDQIRLWPMQARSNGT---KRPAMLDNEAD 643
Query: 649 TVGQLREVSNKTHTAELRLFLEVEFGPDLHPIAP--PDKSKD-DILLFFKLYDPEKGELR 705
+ E+S+ + +FLE P+L P KD D++LF K+YDP+ L
Sbjct: 644 GNKTMIELSDNENP--WTIFLET-VDPELAASGATLPKFDKDHDVMLFLKMYDPKTRSLN 700
Query: 706 YVGRLFLKSSSKPIEILRKLNQMAGFDPDEEIELYEEIKFEPCVMCEHLDKRTSFRLSQI 765
Y G ++ S K ++L + AGF D + LYEE+K + D L ++
Sbjct: 701 YCGHIYTPISCKIRDLLPVMCDRAGFIQDTSLILYEEVKPNLTERIQDYDVSLDKALDEL 760
Query: 766 EDGDIICFQKSPPLESEQECRYPDVPSFLEY 796
DGDII FQK P E +P+ EY
Sbjct: 761 MDGDIIVFQKDDPENDNSE-----LPTAKEY 786
>sp|Q6U7I1|UBP7_CHICK Ubiquitin carboxyl-terminal hydrolase 7 OS=Gallus gallus GN=USP7
PE=2 SV=1
Length = 1101
Score = 507 bits (1306), Expect = e-142, Method: Compositional matrix adjust.
Identities = 304/752 (40%), Positives = 432/752 (57%), Gaps = 46/752 (6%)
Query: 55 FTWTIENFSRLNTKKHYSDVFVVGGYKWRILIFPK----GNNVDHLSMYLDV-ADSGTLP 109
F +T+E F+RL+ FV W+I++ P+ + + +L A+S +
Sbjct: 71 FQFTVERFNRLSESVLSPPCFV-RNLPWKIMVMPRLYPDRPHQKSVGFFLQCNAESDST- 128
Query: 110 YGWSRYAQFSLAVVNQIHSKYSIRKDTQHQFNARESDWGFTSFMPLGDLYDPSRGYLVND 169
WS +AQ L ++N + S + H F +E+DWGF++FM ++ DP +G++ D
Sbjct: 129 -SWSCHAQAVLKIINYKDDEKSFSRRISHLFFHKENDWGFSNFMAWSEVTDPEKGFIEED 187
Query: 170 SVVVEAEVAVRKVLDYWSYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMP 229
V E V ++DSKK TGYVGLKNQGATCYMNSLLQTL+ RKAVY MP
Sbjct: 188 KVTFEVYVQADAPHGV-AWDSKKHTGYVGLKNQGATCYMNSLLQTLFFTNQLRKAVYMMP 246
Query: 230 TTENDLPSGSIPLALQSLFYKLQYNDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCE 289
T E D S S+PLALQ +FY+LQ++D V TK+LTKSFGW+T DSFMQHDVQEL RVL +
Sbjct: 247 T-EGDDSSKSVPLALQRVFYELQHSDKPVGTKKLTKSFGWETLDSFMQHDVQELCRVLLD 305
Query: 290 KLEDKMKGTVVEGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFD 349
+E+KMKGT VEGTI +LF G ++YI+C +VDY+S R E +YD+QL +KG ++++ SF
Sbjct: 306 NVENKMKGTCVEGTIPKLFRGKMVSYIQCKHVDYRSERIEDYYDIQLSIKGKKNIFESFI 365
Query: 350 KYVEVERLEGDNKYHAEEHGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDAMVKINDRY 409
YV VE+L+GDNKY A EHGLQ+A+KGV F+ PPVL LQL RF YD D +KINDR+
Sbjct: 366 DYVAVEQLDGDNKYDAGEHGLQEAEKGVKFLTLPPVLHLQLMRFMYDPQTDQNIKINDRF 425
Query: 410 EFPLQLDLDRENGKYLSPDADRSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKF 469
EFP QL LD ++L + N Y LH+VLVHSG HGGHY ++ P +W KF
Sbjct: 426 EFPEQLPLD----EFLQKTDPKDPAN-YILHAVLVHSGDNHGGHYVVYLNPKGDGKWCKF 480
Query: 470 DDERVTKEDVKRALEEQYGGEEELPPTNPGFNNTPFKFTKYSNAYMLVYIRESDKDKIIC 529
DD+ V++ + A+E YGG ++ +NAYMLVYIRES +++
Sbjct: 481 DDDVVSRCTKEEAIEHNYGGHDD-----------DLSVRHCTNAYMLVYIRESKLSEVLQ 529
Query: 530 NVDEKDIAEHLRIRLKKEQEEKEDKRRYKAQAHLYTIIKVARDEDLAEQIGRDIYFDLVD 589
V + DI + L RL++E+ + KR+ + +AHLY +++ ++ G D+Y D
Sbjct: 530 PVTDHDIPQQLVERLQEEKRIEAQKRKERQEAHLYMQVQIVAEDQFCGHQGNDMY----D 585
Query: 590 HDKVR--SFRVQKQTSFMAFKEEIAKEFGIPIQLQRFWIWAKRQNHTYRPNRPLLPQEEA 647
+KV+ F+V K ++ F + +++ G P R W R N T RP + EA
Sbjct: 586 EEKVKYTVFKVLKNSTLTEFVQNLSQTMGFPQDQIRLWPMQARSNGT---KRPAMLDNEA 642
Query: 648 QTVGQLREVSNKTHTAELRLFLEVEFGPDLHPIAP--PDKSKD-DILLFFKLYDPEKGEL 704
+ E+S+ + +FLE P++ P KD D++LF K+YDP+ L
Sbjct: 643 DGNKTMIELSDNENP--WTIFLET-VDPEMAATGATLPKFDKDHDVMLFLKMYDPKTRSL 699
Query: 705 RYVGRLFLKSSSKPIEILRKLNQMAGFDPDEEIELYEEIKFEPCVMCEHLDKRTSFRLSQ 764
Y G ++ S K ++L + + AGF + + LYEE+K + D L +
Sbjct: 700 NYCGHIYTPISCKIRDLLPVMCERAGFPQETNLILYEEVKPNLTERIQDYDVSLDKALDE 759
Query: 765 IEDGDIICFQKSPPLESEQECRYPDVPSFLEY 796
+ DGDII FQK P E +P+ EY
Sbjct: 760 LMDGDIIVFQKDDPENDSSE-----LPTAKEY 786
>sp|Q9UTT1|UBP21_SCHPO Ubiquitin carboxyl-terminal hydrolase 21 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=ubp21 PE=3 SV=2
Length = 1129
Score = 501 bits (1290), Expect = e-141, Method: Compositional matrix adjust.
Identities = 304/782 (38%), Positives = 443/782 (56%), Gaps = 57/782 (7%)
Query: 47 VEDPPTMKFTWTIENFSRLNTKKHYSDVFVVGGYKWRILIFPKG-NNVDHLSMYLDVA-- 103
+E+ ++W ++NFS L K YS +F G WRI++FPKG N ++ S++L+
Sbjct: 46 LEEAAHASYSWVVKNFSTLEDKT-YSPLFKAGHTTWRIVLFPKGCNQTEYASVFLEYLPQ 104
Query: 104 -------------DSGTLPY---------GWSRYAQFSLAVVNQIHSKYSIRKDTQHQFN 141
+G P +S AQF+L++ N + H+F
Sbjct: 105 CKVEAIRKYEAELAAGKTPTIDPEIVNDETYSCCAQFALSLSNVQDPTVMQINTSHHRFR 164
Query: 142 ARESDWGFTSFMPLGDLYDPS----RGYLVNDSVVVEAEVAVRK----VL--DYWSYDSK 191
+ DWGFT F+ L + P+ +L ND + + V V + VL + +Y+SK
Sbjct: 165 SEVKDWGFTRFVDLRKIAVPTPEFPVPFLENDEICISVTVRVLQDPTGVLWHSFVNYNSK 224
Query: 192 KETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDLPSGSIPLALQSLFYKL 251
KETGYVGLKNQGATCYMNSLLQ+L+ FRK VY +PT +ND S+ ALQ +FY L
Sbjct: 225 KETGYVGLKNQGATCYMNSLLQSLFFTNIFRKTVYKIPT-DNDDSRDSVAYALQRVFYNL 283
Query: 252 QYNDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVVEGTIQQLFEGH 311
+ V+T ELT+SFGW+++DSFMQHD+QE NRVL + LE KMKGT VE + +F G
Sbjct: 284 EKQREPVSTTELTRSFGWNSFDSFMQHDIQEFNRVLQDNLEKKMKGTEVENALNDIFVGK 343
Query: 312 HMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERLEGDNKYHAEEHGLQ 371
+Y++CI+V+Y+S+R E F+D+QL+VKG + SF ++VE L GDNKY+AE HGLQ
Sbjct: 344 MKSYVKCIDVNYESSRVEDFWDIQLNVKGMDTLEDSFRDAIQVETLTGDNKYYAEGHGLQ 403
Query: 372 DAKKGVLFIDFPPVLQLQLKRFEYDFMRDAMVKINDRYEFPLQLDLDRENGKYLSPDADR 431
DA KG++F P VLQLQLKRF+YD +RD MVKINDR+EFPL++DL+ YLS AD+
Sbjct: 404 DAHKGIIFESLPNVLQLQLKRFDYDMLRDMMVKINDRHEFPLEIDLE----PYLSETADK 459
Query: 432 SVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKEDVKRALEEQYGGEE 491
S ++Y LH VLVH G +HGGHYYA I+P W+KFDD+RVT+ +K LE+ YGGE
Sbjct: 460 SESHVYVLHGVLVHGGDLHGGHYYALIKPEKDSNWFKFDDDRVTRATIKEVLEDNYGGEP 519
Query: 492 ELPPTNPGFNNTPFKFTKYSNAYMLVYIRESDKDKIICNVDEKDIAEHLRIRLKKEQEEK 551
G+N PFK ++ NAYMLVY R+S D I+ V +D+ H+R L +E
Sbjct: 520 --AGRAKGYNGNPFK--RFMNAYMLVYFRKSRLDHILSPVTAEDVPFHVRNTLDEEHRVV 575
Query: 552 EDKRRYKAQAHLYTIIKVARDEDLAEQIGRDIY-FDLVDHDKVR-SFRVQKQTSFMAFKE 609
E K + + +Y ++V + + G D+ F D D V + ++++ + ++
Sbjct: 576 ERKLLEREEQQIYRRVRVLTTDGFKKYHGFDMTDFSASDDDPVLITTKIKRNANIWDLQK 635
Query: 610 EIAKEFGIPIQLQRFWIWAKRQNHTYRPNRPLLPQEEAQTVGQLREVSNKTHTAELRLFL 669
+A R W+ RQN T R + PL ++ V Q+ ++ + ++R+++
Sbjct: 636 HLAGLLNRDTSGIRIWLMTNRQNRTVRVDLPL--DKKTILVDQICDMHIRK-DMDMRVYV 692
Query: 670 EV--EFGPDLHPIAPPDKSKDDILLFFKLYDPEKGELRYVGRLFLKSSSKPIEILRK-LN 726
E E L D + D +F K++D E ++ + L + S + PI L + +
Sbjct: 693 EFLSEHNQLLADFGATDDNDFDTYIFLKIFDYETQQISGLADLHV-SKNSPISSLSEWIR 751
Query: 727 QMAGFDPDEEIELYEEIKFEPCVMCEHLDKRTSFRLSQIEDGDIICFQKSPPLESEQECR 786
+ + D I YEEIK M + LD SF S+I+ GDIICF+K +S +
Sbjct: 752 EHLKWSSDVPITYYEEIK---TGMVDVLDPNASFEKSEIQVGDIICFEKKLVHDSSSDTS 808
Query: 787 YP 788
+P
Sbjct: 809 HP 810
>sp|Q09879|UBP5_SCHPO Probable ubiquitin carboxyl-terminal hydrolase 5
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=ubp5 PE=3 SV=3
Length = 1108
Score = 485 bits (1249), Expect = e-136, Method: Compositional matrix adjust.
Identities = 294/750 (39%), Positives = 431/750 (57%), Gaps = 37/750 (4%)
Query: 48 EDPPTMKFTWTIENFSRLNTKKHYSDVFVVGGYKWRILIFPKGN--NVDHLSMYLDV--A 103
E+ +FTW I+++ L+ ++ S F VG +++I FP+G + S++L+ +
Sbjct: 51 EESGFQRFTWHIKSWHELD-RRAVSPQFAVGSRQFKITYFPQGTLQSAGFTSIFLEYIPS 109
Query: 104 DSGTLPYGWSRYAQFSLAVVNQIHSKYSIRKDTQHQFNARESDWGFTSFMPLGDLY---D 160
+ L + QF+ + N S+ +F+ DWGFT F L L
Sbjct: 110 EEEKLSNKYGCCCQFAFVISNPRKPSLSVANSAHCRFSPEIVDWGFTQFAELKKLLCRQA 169
Query: 161 PSRGYLVND-SVVVEAEVAVRK----VL--DYWSYDSKKETGYVGLKNQGATCYMNSLLQ 213
P +V D ++++ A V + K VL + YDSK TGYVGLKNQGATCYMNSLLQ
Sbjct: 170 PDVPPIVEDGALLLTAYVRILKDPTGVLWHSFNDYDSKIATGYVGLKNQGATCYMNSLLQ 229
Query: 214 TLYHIPYFRKAVYHMPTTENDLPSG--SIPLALQSLFYKLQYNDTSVATKELTKSFGWDT 271
+LY I FR+ VY +PT D P G SI ALQ FY LQ+ + V+T ELTKSFGWD+
Sbjct: 230 SLYIIHAFRRIVYQIPT---DSPQGKDSIAYALQRCFYNLQFMNEPVSTTELTKSFGWDS 286
Query: 272 YDSFMQHDVQELNRVLCEKLEDKMKGTVVEGTIQQLFEGHHMNYIECINVDYKSTRKESF 331
DSFMQHDVQE NRVL + LE M+ T VE + LF G +YI C+NV+++S R E +
Sbjct: 287 LDSFMQHDVQEFNRVLQDNLERSMRDTKVENALTNLFVGKMKSYIACVNVNFESARSEDY 346
Query: 332 YDLQLDVKGCRDVYASFDKYVEVERLEGDNKYHAEEHGLQDAKKGVLFIDFPPVLQLQLK 391
+D+QL+VKG +++ SF Y++VE LEGDN Y A+ +G Q+AKKGV+F FPP+L LQLK
Sbjct: 347 WDIQLNVKGMKNLEDSFRSYIQVETLEGDNCYFADTYGFQEAKKGVIFESFPPILHLQLK 406
Query: 392 RFEYDFMRDAMVKINDRYEFPLQLDLDRENGKYLSPDADRSVRNLYTLHSVLVHSGGVHG 451
RFEYDF RD M+KINDRYEFPL+ D +LSP+AD+S Y L+ VLVHSG +H
Sbjct: 407 RFEYDFERDMMIKINDRYEFPLEFDAK----AFLSPEADQSQNCEYVLYGVLVHSGDLHN 462
Query: 452 GHYYAFIRPTLSDQWYKFDDERVTKEDVKRALEEQYGGEEELPPTNPGFNNTPFKFTKYS 511
GHYYA ++ WYK+DD RVT+ ++ LEE YGG+ + +P F +P K ++
Sbjct: 463 GHYYALLKTEKDGPWYKYDDTRVTRATLREVLEENYGGDYIM---HPPF-RSPVKLKRFM 518
Query: 512 NAYMLVYIRESDKDKIICNVDEKDIAEHLRIRLKKEQEEKEDKRRYKAQAHLYTIIKVAR 571
+AYML+Y+R+ D+++ V +I EHL+ L + E +R+ + ++HLYT +++
Sbjct: 519 SAYMLLYLRKDKLDELMNPVSADEIPEHLKEALNPSIQLAELRRKERLESHLYTKVQLIT 578
Query: 572 DEDLAEQIGRDI--YFDLVDHDKVRSFRVQKQTSFMAFKEEIAKEFGIPIQLQRFWIWAK 629
E +E DI + + + + FR++K+ F F +A++ G P + RFW K
Sbjct: 579 PEFYSEHHEFDIADFGNAYKEETIPQFRIKKEAKFSEFIPIVAEKLGYPQECMRFWYVVK 638
Query: 630 RQNHTYRPNRPLLPQEEAQTVGQLREVSNKTHTAELRLFLEVEFGPDL-HPIAPPDKSKD 688
R N T R P+ E T+ +++ V N + LRL+LE+ +L + + +
Sbjct: 639 RHNCTVRVESPV--NELNSTMEEVKNVWN-SQGEILRLYLEITPENELSSSLTHQNTGEW 695
Query: 689 DILLFFKLYDPEKGELRYVGRLFLKSSSKPIEILRKLNQMAGFDPDEEIELYEEIKFEPC 748
+ +F K +D + E+ G L + S + I L + A + + +YEEIK P
Sbjct: 696 NAFIFVKYFDRKSQEISGCGTLHVNKSDEIRSICPLLCERANLPKNTPLNIYEEIK--PG 753
Query: 749 VMCEHLDKRTSFRLSQIEDGDIICFQKSPP 778
M + L +F S++ GDIICF+ P
Sbjct: 754 -MVDFLRLEKTFTQSELSTGDIICFEPCRP 782
>sp|Q9VYQ8|UBP7_DROME Ubiquitin carboxyl-terminal hydrolase 7 OS=Drosophila melanogaster
GN=Usp7 PE=1 SV=1
Length = 1129
Score = 464 bits (1195), Expect = e-129, Method: Compositional matrix adjust.
Identities = 281/694 (40%), Positives = 405/694 (58%), Gaps = 44/694 (6%)
Query: 55 FTWTIENFSRLNTKKHYSDVFVVGGYKWRILIFPKGNNVDHLSMYLDVADSGTLPYGWSR 114
F++T+EN +L +++ V+V WRI++ P N L +L P WS
Sbjct: 104 FSFTVENVVQLKSQRLSPPVYV-RMLPWRIMVIP---NDRALGFFLQCNGENDSP-TWSC 158
Query: 115 YAQFSLAV-VNQIHSKYSIRKDTQHQFNARESDWGFTSFMPLGDLYDPSRGYLVNDSVVV 173
A L + ++ ++ R +H F ++E+D+G+++F+ +L D + Y+ N+S+ +
Sbjct: 159 NAIAELRLKCHKPDAQPFTRARIKHLFYSKENDYGYSNFITWQELKDSEKSYVHNNSITL 218
Query: 174 EAEV---AVRKVLDYWSYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPT 230
E V A VL +DSKK TGYVGLKNQGATCYMNSLLQTLY R +VY +PT
Sbjct: 219 EVHVVADAPHGVL----WDSKKHTGYVGLKNQGATCYMNSLLQTLYFTNSLRLSVYRIPT 274
Query: 231 TENDLPSGSIPLALQSLFYKLQYNDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEK 290
E D S S+ L+LQ +F++LQ+ D V TK+LTKSFGW+T DSFMQHDVQE RVL +K
Sbjct: 275 -EADDSSKSVGLSLQRVFHELQFGDRPVGTKKLTKSFGWETLDSFMQHDVQEFLRVLLDK 333
Query: 291 LEDKMKGTVVEGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDK 350
LE KMKGT++EGTI LFEG +YI+C NVDY STR E+FYD+QL++K +++Y SF
Sbjct: 334 LESKMKGTILEGTIPGLFEGKMSSYIKCKNVDYNSTRYETFYDIQLNIKDKKNIYESFQD 393
Query: 351 YVEVERLEGDNKYHAEEHGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDAMVKINDRYE 410
YV E LEGDNKY A HGLQ+A KGV+F FPPVL L L RF+YD + D+ +K NDR+E
Sbjct: 394 YVAPETLEGDNKYDAGVHGLQEASKGVIFTSFPPVLHLHLMRFQYDPVTDSSIKYNDRFE 453
Query: 411 FPLQLDLDRENGKYLSPDADRSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFD 470
F ++LDR + + AD Y LH+VLVHSG HGGHY FI P +W+KFD
Sbjct: 454 FYEHINLDRYLAESENTLAD------YVLHAVLVHSGDNHGGHYVVFINPKADGRWFKFD 507
Query: 471 DERVTKEDVKRALEEQYGGEEELPPTNPGFNNTPFKFTKYSNAYMLVYIRESDKDKIICN 530
D+ V+ + A+E+ YGG ++ F+ K SNAYMLVYIR+S+ D+++ +
Sbjct: 508 DDVVSSCRKQEAIEQNYGGMDD----EISFH------AKCSNAYMLVYIRQSELDRVLGD 557
Query: 531 VDEKDIAEHLRIRLKKEQEEKEDKRRYKAQAHLYTIIKVARDEDLAEQIGRDIYFDLVDH 590
+ E +I+ L RL E+ + +R+ + +A+ Y + V +E+ EQ R ++ D
Sbjct: 558 ITESEISSDLVERLDLEKRIEMARRKERGEANTYVSVHVILEENFEEQHKRRLF----DL 613
Query: 591 DKV--RSFRVQKQTSFMAFKEEIAKEFGIPIQLQRFWIWAKRQNHTYRPNRPLLPQEEAQ 648
+KV R FR+++ + + + FG+ Q R W Q + + E ++
Sbjct: 614 EKVHPRVFRIKQNQTVDELVDLFVRGFGVSRQRMRMWNLCTAQTQKF--SHFDFVAEGSR 671
Query: 649 TVGQLREVSNKTHTAELRLFLEVEFGPDLHPIAPPDKSKDDILLFFKLYDPEKGELRYVG 708
T+ Q+ S K L+L GP PP K + LLF K YDP L Y+G
Sbjct: 672 TIEQI-STSQKPWVIWLQLAWTDVPGP-----LPPFNPKTESLLFLKYYDPRNKRLNYIG 725
Query: 709 RLFLKSSSKPIEILRKLNQMAGFDPDEEIELYEE 742
+ + I+++ +N GF+PD E+ +Y+E
Sbjct: 726 CTQQPHTRRLIDLVPDVNSKLGFEPDTELTIYDE 759
>sp|P50101|UBP15_YEAST Ubiquitin carboxyl-terminal hydrolase 15 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=UBP15 PE=1
SV=1
Length = 1230
Score = 456 bits (1173), Expect = e-127, Method: Compositional matrix adjust.
Identities = 307/879 (34%), Positives = 470/879 (53%), Gaps = 129/879 (14%)
Query: 44 NQQVEDPPTMKFTWTIENFSRLNTKKHYSDVFVVGGYKWRILIFPKGNNVDHLSMYL--- 100
+++VE FTW I +++ L K+ S F +G ++W IL+FP+GN+ +++YL
Sbjct: 31 DEEVETLLEDSFTWNIPDWNELTNPKYNSPRFRIGDFEWDILLFPQGNHNKGVAVYLEPH 90
Query: 101 -----DVADSGTLPYG--WSRYAQFSLAVVNQIHS-KYSIRKDTQHQFNARESDWGFTSF 152
D +P W AQF++ + + ++ + H+FNA ++DWGF +
Sbjct: 91 PEEKLDETTGEMVPVDPDWYCCAQFAIGISRPGNGDTINLINKSHHRFNALDTDWGFANL 150
Query: 153 MPLGDLYDPSRG----YLVNDSVVVEAEVAVRK----VL--DYWSYDSKKETGYVGLKNQ 202
+ L +L PS+G +L ++ + A V + K VL ++ +YDSKK TGYVG +NQ
Sbjct: 151 IDLNNLKHPSKGRPLSFLNEGTLNITAYVRILKDPTGVLWHNFLNYDSKKVTGYVGFRNQ 210
Query: 203 GATCYMNSLLQTLYHIPYFRKAVYHMPTTENDLPSGSIPLALQSLFYKLQYNDTSVATKE 262
GATCY+NSLLQ+ + YFRK VY +PT E++ P+ S+PLALQ FY+LQ +D + T E
Sbjct: 211 GATCYLNSLLQSYFFTKYFRKLVYEIPT-EHESPNNSVPLALQRAFYQLQVSDIPLDTLE 269
Query: 263 LTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVVEGTIQQLFEGHHMNYIECINVD 322
LT+SFGWDT +SF QHDVQELNR+L ++LE+ MKGT VEG + ++F G +YI+CINVD
Sbjct: 270 LTRSFGWDTAESFTQHDVQELNRILMDRLENNMKGTPVEGKLNEIFVGKMKSYIKCINVD 329
Query: 323 YKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERLEGDNKYHAEEHGLQDAKKGVLFIDF 382
Y+S R E F+DLQL+VK +++ SFD Y+E+E + G+N+Y A+++GLQDA+KGV+F F
Sbjct: 330 YESARVEDFWDLQLNVKNFKNLQESFDNYIEMELMNGENQYAAQDYGLQDAQKGVIFESF 389
Query: 383 PPVLQLQLKRFEYDFMRDAMVKINDRYEFPLQLDL----DRENGKYLSPDADRSVRN--L 436
PPVL LQLKRFEYDF D MVK+ND+YEFP +DL D++ K + D++ +N +
Sbjct: 390 PPVLHLQLKRFEYDFNYDQMVKVNDKYEFPETIDLSPFVDKDVLKK-TLDSENKDKNPYV 448
Query: 437 YTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKEDVKRALEEQYGGEEELPP- 495
Y LH VLVHSG + GHYY I+P + DQWY+FDDERV + K+ +E +G + LP
Sbjct: 449 YNLHGVLVHSGDISTGHYYTLIKPGVEDQWYRFDDERVWRVTKKQVFQENFGC-DRLPDE 507
Query: 496 -----TNPGFNNTPFKFTKYSNAYMLVYIRESDKDKIICNVDEKDIAEHLRIRLKKEQEE 550
T + N + ++++AYMLVYIR+ ++ ++ V E D+ +H+ R+++E +E
Sbjct: 508 KVRTMTRGEYQN--YIIQRHTSAYMLVYIRQEQEEDLLRPVLESDVPKHVITRVREEIKE 565
Query: 551 KEDKRRYKAQAHLYTIIKVARDEDLAEQIGRDIYFDLVDHDKVRSF-------------- 596
+E K + +AHLY +++ ++ G FD HD R F
Sbjct: 566 RETKEKEIREAHLYVTLRLHSIKEFIHYEG----FDYFAHDGFRLFAEELNDSGLQQINL 621
Query: 597 RVQKQTSFMAFKEEIAKEFGIPIQLQ-RFWIWAKRQNHTYRPNRPL------------LP 643
+V + T I + IP + ++W R+N T R +P+ L
Sbjct: 622 KVLRTTKLSDIFASIKETMNIPQERDVKYWKMDYRRNSTLRLTQPINFESVNITLQEALK 681
Query: 644 QEEAQTVGQLREVSNKTHTAE-----------LRLF-----LEVEFGPDLHPIAPPDKSK 687
+E+ +T+ T E L LF LE++F L + K++
Sbjct: 682 KEKKRTMQTQYGEEGVASTEEDDKALLETVSFLDLFIEEPYLELQFLNKLKEASLISKAQ 741
Query: 688 -DDIL----------------------------LFFKLYDPEKGELRYVGRLFLKSSSKP 718
DD L LF K YDP +L G
Sbjct: 742 LDDELISTIRTNLPELTKGGIEPVFATDNKSNLLFVKSYDPHTQKLLGFGHF-------A 794
Query: 719 IEILRKLNQMAGFDPD-----EEIELYEEIKFEPCVMCEHLDKRTSFRLSQIEDGDIICF 773
+ L++L+ ++ D E++ YEE+ +P + E K T + + I+ GDI+ F
Sbjct: 795 VNQLQQLSDISAIIEDSISSNEKLTFYEEV--QPGTINEIYMKETIYD-ADIDTGDIVSF 851
Query: 774 QKSPPLESEQECRYPDVPSFLEYVHNRQVQNMWKFSINS 812
+ + + Y + F Y+ R KF +S
Sbjct: 852 EVPGAVLPDTFPVYATIKDFYSYLRYRVKLKFSKFDGSS 890
>sp|Q60MK8|UBP7_CAEBR Ubiquitin carboxyl-terminal hydrolase 7 OS=Caenorhabditis briggsae
GN=usp-7 PE=3 SV=1
Length = 1129
Score = 340 bits (873), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 244/788 (30%), Positives = 383/788 (48%), Gaps = 91/788 (11%)
Query: 51 PTMKFTWTIENFSRLNTK---KHYSDVFVVGGYKWRILIF------------PKGNNVDH 95
P IE FS K + S +V G WRIL + N +
Sbjct: 28 PEGHLALDIERFSSFMNKPDSRIMSKPVIVRGIPWRILAICRHQQNNRQVATSRSRNNYN 87
Query: 96 LSMYLDVADSGTLPYG--WSRYAQFSLAVVNQIHSKYSIRKDTQHQFNARESDWGFTSFM 153
+L + L W Y Q +L V+N + I+K H F+ E DWGF+++
Sbjct: 88 FGFFLQCNNDDLLQKRGMWRCYGQATLEVLNA--NGPPIQKKIHHSFHNTEVDWGFSNYD 145
Query: 154 PLGDLYDPSRGYLVNDSVVVEAE-VAVRKVLDYWSYDSKKETGYVGLKNQGATCYMNSLL 212
L P GY+++D + + A + +DSKK TG +GL+NQGATCYMNS+L
Sbjct: 146 QYDTLTSPKDGYVIDDVIRLRCRFTADVPTGANYMWDSKKHTGCIGLRNQGATCYMNSIL 205
Query: 213 QTLYHIPYFRKAVYHMPT-TENDLPSGSIPLALQSLFYKLQYNDTSVATKELTKSFGWDT 271
Q+ Y FR+AVY+M TE + +I LA+Q +FY+LQ + +V T LT++FGWD
Sbjct: 206 QSFYFTTGFRRAVYNMEVGTEPN--ESNIVLAMQRVFYELQMSSEAVETNSLTRAFGWDK 263
Query: 272 YDSFMQHDVQELNRVLCEKLEDKMKGTVVEGTIQQLFEGHHMNYIECINVDYKSTRKESF 331
D+F QHDVQE RVL + LE KMKGT E +I LF G+ +YI+C++VDY+S+R ESF
Sbjct: 264 LDAFNQHDVQEFCRVLLDNLETKMKGTSEEKSIPNLFRGNMKSYIKCLDVDYESSRTESF 323
Query: 332 YDLQLDVKGCRDVYASFDKYVEVERLEGDNKYHAEEHGLQDAKKGVLFIDFPPVLQLQLK 391
YD+QL+V G + +FD Y E L+ DNKY A +HGLQ A+KGV F++ PPVL +QL
Sbjct: 324 YDVQLNVLGMDSLERAFDAYTTPETLDDDNKYDAGDHGLQRAEKGVKFVELPPVLHVQLM 383
Query: 392 RFEYDFMRDAMVKINDRYEFPLQLDLDRENGKYLSPDADRSVRNLYTLHSVLVHSGGVHG 451
RF+Y + KIN+R+ FP +++L N L P + +Y+LH+VLVHSG HG
Sbjct: 384 RFQYCGVEQ---KINERFSFPEKMNL--SNCCELGPMLNEE-DCVYSLHAVLVHSGEFHG 437
Query: 452 GHYYAFIR---------PTLSDQWYKFDDERVTKEDVKRALEEQYGGEEELPPTNPGFNN 502
GHY +I PT + +W KFDD+ V++ A+ +GGE+ +
Sbjct: 438 GHYVTYINVNLHESAVDPTATAKWCKFDDDVVSRTTTDDAIVSNFGGEKAMN-------- 489
Query: 503 TPFKFTKYSNAYMLVYIRESDKDKIICNVDEKDIAEHLRIRLKKEQEEKEDKRRYKAQAH 562
S+AYMLVY+R++ D+++ + + I + + + E+ + +++ + +
Sbjct: 490 --------SSAYMLVYVRDNAIDQVLAPIPDTQIPQSVSRTFEMERMHRNREKKKQEEEQ 541
Query: 563 LYTIIKVARDEDLAEQIGRDI-----YFDLVDHDKVRSFRVQKQTSFMAFKEEIAKEFGI 617
+ I + + LA D+ D++ H+ V V + + +E++ ++ +
Sbjct: 542 MCMSITLVTPDILATNHSFDLIEPVTITDVLPHETVYKHMVTAEL-YQFVQEKLFEKSTL 600
Query: 618 P---------------------IQLQRFWIWAKRQNHTYRPNRP------LLPQEEAQTV 650
P ++ ++F R +Y ++P L P + +
Sbjct: 601 PKVDMFDSDDETRMKRKEILRRLKTKKFGFRLWRMTDSYTVDKPQKMASRLRPSDFIEYS 660
Query: 651 GQLREVSNKTHTAELRLFLEVEFGPDLHPIAPPDKSKDDILLFFKLYDPEKGELRYVGRL 710
R +H E + VE L P+ ++ DIL F K YD + +G +
Sbjct: 661 IDTRLDHTLSHDTET---IYVEHSQFLQPLNEYLPTR-DILFFLKYYDAITDKFTIIGHV 716
Query: 711 FLKSSSKPIEILRKLNQMAGFDPDEEIELYEEIKFEPCVMCEHLDKRTSFRLSQIEDGDI 770
L S + + G D E++ Y E + ++ T RL +DG I
Sbjct: 717 TLDSHKRLNLYRMTFCDLLGLPKDTELKYYIEHAPNHVEQIDDPNRSTISRLVDDQDGAI 776
Query: 771 ICFQKSPP 778
+ +K+ P
Sbjct: 777 VIVEKADP 784
>sp|Q7JKC3|UBP7_CAEEL Ubiquitin carboxyl-terminal hydrolase 7 OS=Caenorhabditis elegans
GN=usp-7 PE=2 SV=1
Length = 1135
Score = 330 bits (847), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 251/807 (31%), Positives = 386/807 (47%), Gaps = 104/807 (12%)
Query: 49 DP--PTMKFTWTIENFSRLNTK---KHYSDVFVVGGYKWRILIFPKGNNVDHLSMYLDVA 103
DP P + I+ FS+ ++ + S +V G WRIL + SM V
Sbjct: 26 DPFGPEGHLSLDIDCFSKFMSRSDNRIMSKPIIVRGIPWRILAICRNQQGSRHSMNSRVN 85
Query: 104 DSGTLPYG----------------WSRYAQFSLAVVNQIHSKYSIRKDTQHQFNARESDW 147
S +G W Y L V+N SI+K H F+ E DW
Sbjct: 86 RSN-FNFGFFLQCNNDELLQKRGMWRCYGTAVLEVLNA--DGPSIQKKIHHSFHNTEVDW 142
Query: 148 GFTSFMPLGDLYDPSRGYLVNDSVVVEAE-VAVRKVLDYWSYDSKKETGYVGLKNQGATC 206
GF+++ L +P GY+VND++ + A + +DSK+ TG +GL+NQGATC
Sbjct: 143 GFSNYDQYDTLCNPKDGYVVNDTIKLRCRFTADVPTGANYMWDSKRHTGCIGLRNQGATC 202
Query: 207 YMNSLLQTLYHIPYFRKAVYHMPT-TENDLPSGSIPLALQSLFYKLQYNDTSVATKELTK 265
YMNS+LQ+ Y FR+AVY+M TE + +I LA+Q +FY+LQ +V T LT+
Sbjct: 203 YMNSILQSFYFTTGFRRAVYNMDVGTEPN--ESNIVLAMQRVFYELQMASEAVETNSLTR 260
Query: 266 SFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVVEGTIQQLFEGHHMNYIECINVDYKS 325
+FGWD D+F QHDVQE RVL + LE KMKGT E +I LF G+ +YI+C++VDY+S
Sbjct: 261 AFGWDKLDAFNQHDVQEFCRVLLDNLETKMKGTSEEKSIPNLFRGNMKSYIKCLDVDYES 320
Query: 326 TRKESFYDLQLDVKGCRDVYASFDKYVEVERLEGDNKYHAEEHGLQDAKKGVLFIDFPPV 385
+R ESFYD+QL+V G + +F+ Y E L+ +NKY A +HGLQ A+KGV F++ PP+
Sbjct: 321 SRTESFYDVQLNVLGMDSLERAFEAYTTSEILDDENKYDAGDHGLQRAEKGVKFVELPPI 380
Query: 386 LQLQLKRFEYDFMRDAMVKINDRYEFPLQLDLDR--ENGKYLSPDADRSVRNLYTLHSVL 443
L +QL RF+Y + KIN+R+ FP +++L E G L+ + +Y+LH+VL
Sbjct: 381 LHVQLMRFQYCGVEQ---KINERFSFPEKMNLASCCELGPMLTEED-----CVYSLHAVL 432
Query: 444 VHSGGVHGGHYYAFIR---------PTLSDQWYKFDDERVTKEDVKRALEEQYGGEEELP 494
VHSG HGGHY +I PT S +W KFDD+ V++ A+ +GGE+
Sbjct: 433 VHSGEFHGGHYVTYINVNLHESAVDPTSSAKWCKFDDDVVSRTTTDDAIVSNFGGEK--- 489
Query: 495 PTNPGFNNTPFKFTKYSNAYMLVYIRESDKDKIICNVDEKDIAEHLRIRLKKEQ-EEKED 553
T S+AYMLVY+R++ D+ + + + I + + + E+ +
Sbjct: 490 -------------TMNSSAYMLVYVRDNAIDQFLAPIPDSQIPQSVSRTFEMERLHRNRE 536
Query: 554 KRRYKAQAHLYTIIKVARDEDLAEQIGRDIYFDLVD----HDKVRSFRVQKQTSFMAFKE 609
K++ + + I+ V D + + FDLVD HD + V K +
Sbjct: 537 KKKLEEEQLCMGIVLVTPD-----IVASNHSFDLVDQSIVHDSIPHETVWKHMFTAELYQ 591
Query: 610 EIAKEFGIPIQLQRFWIW--------AKRQNHTYRPNRPL------------LPQEEAQT 649
+ +Q+ ++ A+R N ++ L + +
Sbjct: 592 FVHDRLFEKSAMQKIDMFDSDDEARQARRDNLRRIKSKKFNFRLWRMTDSYSLERTTQKL 651
Query: 650 VGQLRE---VSNKTHTAELRLF------LEVEFGPDL-HPIAPPDKSKDDILLFFKLYDP 699
+LR + KT T L + VEF ++ P+ D ++ D+L F K YD
Sbjct: 652 TSRLRPSEFIDCKTDTRLDTLLSQDFETIYVEFSNNIERPLCEYDTAR-DLLFFVKYYDT 710
Query: 700 EKGELRYVGRLFLKSSSKPIEILRKLNQMAGFDPDEEIELYEEIKFEPCVMCEHLDKRTS 759
+ +G + L +M G D E++ Y E + + +
Sbjct: 711 MTDKFTIIGHTMFDCHKRFNLYRSMLCEMIGLPADTELKYYMEHAASYLELVDLTQNYSI 770
Query: 760 FRLSQIEDGDIICFQKSPPLESEQECR 786
RL + +DG I+ +K S Q +
Sbjct: 771 GRLVEEQDGGILVVEKVETSTSTQNAK 797
>sp|Q5U252|UBP47_XENLA Ubiquitin carboxyl-terminal hydrolase 47 OS=Xenopus laevis GN=usp47
PE=2 SV=1
Length = 1350
Score = 224 bits (572), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 141/387 (36%), Positives = 212/387 (54%), Gaps = 71/387 (18%)
Query: 193 ETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDL-PSGSIPLALQSLFYKL 251
+TGYVGL NQ TCY+NSLLQTL+ P FR A+Y E++ P SIP LQ LF L
Sbjct: 169 DTGYVGLVNQAMTCYLNSLLQTLFMTPEFRNALYKWEFEESEEDPVSSIPYQLQRLFVLL 228
Query: 252 QYNDT-SVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVVEGTIQQLFEG 310
Q + ++ T ++T+SFGWD+ +++ QHDVQEL RV+ + LE K K T I QL++G
Sbjct: 229 QTSKKRAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADLINQLYQG 288
Query: 311 HHMNYIECINVDYKSTRKESFYDLQLDVK--GCRDVYASFDK----YVEVERLEGDNKYH 364
+Y++C+ Y+S R ++F D+ L ++ G + S ++ +++ E L+G N+Y
Sbjct: 289 KLKDYVKCLECGYESWRIDTFLDIPLVIRPYGSNTAFGSMEEALHAFIQPETLDGPNQYF 348
Query: 365 AEEHGLQ-DAKKGVLFIDFPPVLQLQLKRFEYDFMRDAMVKINDRYEFPLQLDL------ 417
E + DA+KG+ F+ FP +L LQLKRF++D+ +K+NDR FP +LD+
Sbjct: 349 CERCKRKCDARKGLKFLHFPYLLTLQLKRFDFDYTSMHRIKLNDRMTFPDELDMSPFIDM 408
Query: 418 ------------------------DRENGKYLSPDA----------------DRSV---R 434
D+ + + + DA ++SV
Sbjct: 409 EDEKSPQTDSCTDSGAENEGSCHSDQMSNDFSTDDAVDEGICLETNSNIEKLNKSVAEKN 468
Query: 435 NLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDE---RVTKEDVKRALEEQYGGEE 491
+LY L SV+VHSG GGHYYA I+ QWY F+D+ R+T+ED+K+ YGG
Sbjct: 469 SLYELFSVMVHSGSAAGGHYYACIKSFADGQWYSFNDQHVSRITQEDIKKT----YGG-- 522
Query: 492 ELPPTNPGFNNTPFKFTKYSNAYMLVY 518
N G+ ++ F + +NAYML+Y
Sbjct: 523 --ATGNRGYYSSAFASS--TNAYMLMY 545
>sp|A1A5G2|UBP47_XENTR Ubiquitin carboxyl-terminal hydrolase 47 OS=Xenopus tropicalis
GN=usp47 PE=2 SV=1
Length = 1354
Score = 224 bits (571), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 141/387 (36%), Positives = 212/387 (54%), Gaps = 71/387 (18%)
Query: 193 ETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDL-PSGSIPLALQSLFYKL 251
+TGYVGL NQ TCY+NSLLQTL+ P FR A+Y E++ P SIP LQ LF L
Sbjct: 170 DTGYVGLVNQAMTCYLNSLLQTLFMTPEFRNALYKWEFEESEEDPVSSIPYQLQRLFVLL 229
Query: 252 QYNDT-SVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVVEGTIQQLFEG 310
Q + ++ T ++T+SFGWD+ +++ QHDVQEL RV+ + LE K K T I QL++G
Sbjct: 230 QTSKKRAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADLINQLYQG 289
Query: 311 HHMNYIECINVDYKSTRKESFYDLQLDVK--GCRDVYASFDK----YVEVERLEGDNKYH 364
+Y++C+ Y+S R ++F D+ L ++ G + S ++ +++ E L+G N+Y
Sbjct: 290 KLKDYVKCLECGYESWRIDTFLDIPLVIRPFGSNTAFGSMEEALQAFIQPETLDGPNQYF 349
Query: 365 AEEHGLQ-DAKKGVLFIDFPPVLQLQLKRFEYDFMRDAMVKINDRYEFPLQLDL------ 417
E + DA+KG+ F+ FP +L LQLKRF++D+ +K+NDR FP +LD+
Sbjct: 350 CERCKRKCDARKGLKFLHFPYLLTLQLKRFDFDYTSMHRIKLNDRMTFPDELDMSPFIDV 409
Query: 418 ------------------------DRENGKYLSPDA----------------DRSV---R 434
D+ + + + DA ++SV
Sbjct: 410 EDEKSPQTDSCTDSGAENEGSCHSDQMSNDFSTDDAVDEGICLETNSNIEKLNKSVSEKN 469
Query: 435 NLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDE---RVTKEDVKRALEEQYGGEE 491
+LY L SV+VHSG GGHYYA I+ QWY F+D+ R+T+ED+K+ YGG
Sbjct: 470 SLYELFSVMVHSGSAAGGHYYACIKSFADGQWYSFNDQHVSRITQEDIKKT----YGGS- 524
Query: 492 ELPPTNPGFNNTPFKFTKYSNAYMLVY 518
N G+ ++ F + +NAYML+Y
Sbjct: 525 ---TGNRGYYSSAFASS--TNAYMLMY 546
>sp|Q8BY87|UBP47_MOUSE Ubiquitin carboxyl-terminal hydrolase 47 OS=Mus musculus GN=Usp47
PE=1 SV=2
Length = 1376
Score = 223 bits (568), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 155/465 (33%), Positives = 240/465 (51%), Gaps = 77/465 (16%)
Query: 158 LYDPSRGYLVNDSVVVEAEVAVRKVLDYWSYDSKKETGYVGLKNQGATCYMNSLLQTLYH 217
++D G L + V V + Y S +K ETGYVGL NQ TCY+NSLLQTL+
Sbjct: 149 VHDRFIGPLPREGSVASTNDYVSQNYSYSSILNKSETGYVGLVNQAMTCYLNSLLQTLFM 208
Query: 218 IPYFRKAVY--HMPTTENDLPSGSIPLALQSLFYKLQYNDT-SVATKELTKSFGWDTYDS 274
P FR A+Y +E D P SIP LQ LF LQ + ++ T ++T+SFGWD+ ++
Sbjct: 209 TPEFRNALYKWEFEDSEED-PVTSIPYQLQRLFVLLQTSKKRAIETTDVTRSFGWDSSEA 267
Query: 275 FMQHDVQELNRVLCEKLEDKMKGTVVEGTIQQLFEGHHMNYIECINVDYKSTRKESFYDL 334
+ QHDVQEL RV+ + LE K K T I +L++G +Y+ C+ Y+ R +++ D+
Sbjct: 268 WQQHDVQELCRVMFDALEQKWKQTEQADLINELYQGKLKDYVRCLECGYEGWRIDTYLDI 327
Query: 335 QLDVK--GCRDVYASFDK----YVEVERLEGDNKYHAEEHGLQ-DAKKGVLFIDFPPVLQ 387
L ++ G +AS ++ +++ E L+G N+Y E + DA+KG+ F+ FP +L
Sbjct: 328 PLVIRPYGSSQAFASVEEALHAFIQPEILDGPNQYFCERCKKKCDARKGLRFLHFPYLLT 387
Query: 388 LQLKRFEYDFMRDAMVKINDRYEFPLQLDL------------------------------ 417
LQLKRF++D+ +K+NDR FP +LD+
Sbjct: 388 LQLKRFDFDYTTMHRIKLNDRMSFPEELDMSTFIDIEDEKSPQTESCTDSGAENEGSCHS 447
Query: 418 DRENGKYLSPDA-DRSV-----------------RN--LYTLHSVLVHSGGVHGGHYYAF 457
D+ + + + DA D + +N +Y L SV+VHSG GGHYYA
Sbjct: 448 DQMSNDFSTDDAVDEGICLESSSGSEKISKPGLEKNSLMYELFSVMVHSGSAAGGHYYAC 507
Query: 458 IRPTLSDQWYKFDDE---RVTKEDVKRALEEQYGGEEELPPTNPGFNNTPFKFTKYSNAY 514
I+ DQWY F+D+ R+T+ED+K+ G F +NAY
Sbjct: 508 IKSFSDDQWYSFNDQHVSRITQEDIKKTHGGSSGSRGYYSSA----------FASSTNAY 557
Query: 515 MLVY-IRESDKDKIICNVDEKDIAEHLRIRLKKEQEEKEDKRRYK 558
ML+Y +++ ++ VDE EH++ ++KE+E +E ++R +
Sbjct: 558 MLIYRLKDPTRNAKFLEVDE--YPEHIKNLVQKERELEEQEKRQR 600
>sp|Q96K76|UBP47_HUMAN Ubiquitin carboxyl-terminal hydrolase 47 OS=Homo sapiens GN=USP47
PE=1 SV=3
Length = 1375
Score = 216 bits (549), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 145/432 (33%), Positives = 225/432 (52%), Gaps = 75/432 (17%)
Query: 190 SKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDL-PSGSIPLALQSLF 248
+K ETGYVGL NQ TCY+NSLLQTL+ P FR A+Y E++ P SIP LQ LF
Sbjct: 181 NKSETGYVGLVNQAMTCYLNSLLQTLFMTPEFRNALYKWEFEESEEDPVTSIPYQLQRLF 240
Query: 249 YKLQYNDT-SVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVVEGTIQQL 307
LQ + ++ T ++T+SFGWD+ +++ QHDVQEL RV+ + LE K K T I +L
Sbjct: 241 VLLQTSKKRAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADLINEL 300
Query: 308 FEGHHMNYIECINVDYKSTRKESFYDLQLDVK--GCRDVYASFDK----YVEVERLEGDN 361
++G +Y+ C+ Y+ R +++ D+ L ++ G +AS ++ +++ E L+G N
Sbjct: 301 YQGKLKDYVRCLECGYEGWRIDTYLDIPLVIRPYGSSQAFASVEEALHAFIQPEILDGPN 360
Query: 362 KYHAEEHGLQ-DAKKGVLFIDFPPVLQLQLKRFEYDFMRDAMVKINDRYEFPLQLDL--- 417
+Y E + DA+KG+ F+ FP +L LQLKRF++D+ +K+NDR FP +LD+
Sbjct: 361 QYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEELDMSTF 420
Query: 418 -DRENGKYLSPDA--DRSVRNLYTLH---------------------------------- 440
D E+ K ++ D N + H
Sbjct: 421 IDVEDEKSPQTESCTDSGAENEGSCHSDQMSNDFSNDDGVDEGICLETNSGTEKISKSGL 480
Query: 441 ----------SVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDE---RVTKEDVKRALEEQY 487
SV+VHSG GGHYYA I+ +QWY F+D+ R+T+ED+K+
Sbjct: 481 EKNSLIYELFSVMVHSGSAAGGHYYACIKSFSDEQWYSFNDQHVSRITQEDIKKTHGGSS 540
Query: 488 GGEEELPPTNPGFNNTPFKFTKYSNAYMLVY-IRESDKDKIICNVDEKDIAEHLRIRLKK 546
G F +NAYML+Y +++ ++ VDE EH++ ++K
Sbjct: 541 GSRGYYSSA----------FASSTNAYMLIYRLKDPARNAKFLEVDE--YPEHIKNLVQK 588
Query: 547 EQEEKEDKRRYK 558
E+E +E ++R +
Sbjct: 589 ERELEEQEKRQR 600
>sp|E1C1R4|UBP47_CHICK Ubiquitin carboxyl-terminal hydrolase 47 OS=Gallus gallus GN=USP47
PE=3 SV=1
Length = 1375
Score = 215 bits (548), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 152/476 (31%), Positives = 237/476 (49%), Gaps = 92/476 (19%)
Query: 193 ETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDL-PSGSIPLALQSLFYKL 251
ETGYVGL NQ TCY+NSLLQTL+ P FR A+Y E++ P SIP LQ LF L
Sbjct: 183 ETGYVGLVNQAMTCYLNSLLQTLFMTPEFRNALYKWEFEESEEDPVTSIPYQLQRLFVLL 242
Query: 252 QYNDT-SVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVVEGTIQQLFEG 310
Q + ++ T ++T+SFGWD+ +++ QHDVQEL RV+ + LE K K T I QL++G
Sbjct: 243 QTSKKRAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADLINQLYQG 302
Query: 311 HHMNYIECINVDYKSTRKESFYDLQLDVK--GCRDVYASFDK----YVEVERLEGDNKYH 364
+Y+ C+ Y+ R +++ D+ L ++ G +AS ++ +++ E L+G N+Y
Sbjct: 303 KLKDYVRCLECGYEGWRIDTYLDIPLVIRPYGSNQAFASVEEALHAFIQPEILDGPNQYF 362
Query: 365 AEEHGLQ-DAKKGVLFIDFPPVLQLQLKRFEYDFMRDAMVKINDRYEFPLQLDL----DR 419
E + DA+KG+ F+ FP +L LQLKRF++D+ +K+NDR FP +LD+ D
Sbjct: 363 CERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEELDMSIFIDV 422
Query: 420 ENGKYLSPDA--DRSVRNLYTLH------------------------------------- 440
E+ K ++ D N + H
Sbjct: 423 EDEKSPQTESCTDSGAENEGSCHSDQMSNDFSNDDGVDEGICLESNSAAERIAKVGSEKN 482
Query: 441 -------SVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDE---RVTKEDVKRALEEQYGGE 490
SV+VHSG GGHYYA I+ DQWY F+D+ ++T+ED+K+ G
Sbjct: 483 SLLYELFSVMVHSGSAAGGHYYACIKSFSDDQWYSFNDQHVSKITQEDIKKTYGGSSGSR 542
Query: 491 EELPPTNPGFNNTPFKFTKYSNAYMLVYIRESDKDKIICNVDEKDIAEHLRIRLKKEQEE 550
F +NAYML+Y R D + ++ + +H++ ++KE+E
Sbjct: 543 GYYSSA----------FASSTNAYMLIY-RLKDPARNAKFLESHEYPDHIKQLVQKEREL 591
Query: 551 KEDKRRYK-----------------AQAHLYTIIKVARDEDLAEQIGRDIYFDLVD 589
+E ++R + Q + ++V +D L E +G I + L+D
Sbjct: 592 EEQEKRQREIERNTCKIKLFCMHPTKQIMMENKLEVHKDRTLKEAVG--IAYKLMD 645
>sp|Q24574|UBPE_DROME Ubiquitin carboxyl-terminal hydrolase 64E OS=Drosophila
melanogaster GN=Ubp64E PE=1 SV=2
Length = 1556
Score = 182 bits (463), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 136/459 (29%), Positives = 218/459 (47%), Gaps = 97/459 (21%)
Query: 170 SVVVEAEVAVRKVLDYWSYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMP 229
S E E R+ S GYVGL NQ TCY+NSLLQ L+ P FR A+Y
Sbjct: 376 SATTETEAEARQA-------SLGPRGYVGLVNQAMTCYLNSLLQALFMTPEFRNALYRW- 427
Query: 230 TTENDLPSGSIPLALQSLFYKLQYN-DTSVATKELTKSFGWDTYDSFMQHDVQELNRVLC 288
+ND + +IP LQ LF LQ + +V T +LT+SFGWD+ +++ QHD+QEL RV+
Sbjct: 428 EFDNDNEAKNIPYQLQKLFLNLQTSPKAAVETTDLTRSFGWDSTEAWQQHDIQELCRVMF 487
Query: 289 EKLEDKMKGTVVEGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVK--GCRDVYA 346
+ LE K K T I L+EG +Y++C+ + + TR+++F D+ L V+ G Y
Sbjct: 488 DALEHKFKNTKQANLISNLYEGKMNDYVKCLECNTEKTREDTFLDIPLPVRPFGSSSAYG 547
Query: 347 SFDK----YVEVERLEGDNKYHAEEHGLQ-DAKKGVLF---------------------- 379
S ++ +V+ E L+G+N+Y E+ + DA KG+ F
Sbjct: 548 SIEEALRAFVQPETLDGNNQYLCEKCKKKCDAHKGLHFKSFPYILTLHLKRFDFDYQTMH 607
Query: 380 -------IDFPPVLQLQL----------------------------KRFEYDFMRDAMVK 404
+ FP L L E D + +V
Sbjct: 608 RIKLNDRVTFPQTLNLNTFINRSGNSGEQNSQLNGTVDDCSTADSGSAMEDDNLSSGVVT 667
Query: 405 INDRYEFPLQLDLDRENGKYLSPDADRSVRN-----LYTLHSVLVHSGGVHGGHYYAFIR 459
+ L+ D + G +S +S + LY L ++++HSG GGHYYA+I+
Sbjct: 668 TASSSQHENDLN-DEDEGIDMSSSTSKSAKQGSGPYLYELFAIMIHSGSASGGHYYAYIK 726
Query: 460 PTLSDQWYKFDDERV---TKEDVKRALEEQYGGEEELPPTNPGFNNTPFKFTKYSNAYML 516
+++W+ F+D+ V T+ED++R+ +GG P + +T +NAYML
Sbjct: 727 DFDNNEWFCFNDQNVTSITQEDIQRS----FGG--------PNGSYYSSAYTSSTNAYML 774
Query: 517 VYIR-ESDKDKIICNVDEKDIAEHLRIRLKKEQEEKEDK 554
+Y + ++ +++++ V D EH++ L K E+E +
Sbjct: 775 MYRQVDAKRNELVAKV--ADFPEHIKTLLPKLHSEEETR 811
>sp|Q9NVE5|UBP40_HUMAN Ubiquitin carboxyl-terminal hydrolase 40 OS=Homo sapiens GN=USP40
PE=2 SV=3
Length = 1235
Score = 170 bits (430), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 112/302 (37%), Positives = 157/302 (51%), Gaps = 25/302 (8%)
Query: 194 TGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTE------NDLPSGS---IPLAL 244
T G++NQG TCY+NSLLQTL+ P FR+A++ + E D P IPL L
Sbjct: 38 TNLSGIRNQGGTCYLNSLLQTLHFTPEFREALFSLGPEELGLFEDKDKPDAKVRIIPLQL 97
Query: 245 QSLFYKLQYNDTSVA-TKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVVEGT 303
Q LF +L D A T +LT SFGW + + QHDVQELNR+L LE + GT
Sbjct: 98 QRLFAQLLLLDQEAASTADLTDSFGWTSNEEMRQHDVQELNRILFSALETSLVGTSGHDL 157
Query: 304 IQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVY-ASFDKYVEVERLEGDNK 362
I +L+ G +N I C S R+E F DL + VK + A ++ YVE E + DN
Sbjct: 158 IYRLYHGTIVNQIVCKECKNVSERQEDFLDLTVAVKNVSGLEDALWNMYVEEEVFDCDNL 217
Query: 363 YHAEEHG-LQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDAMVKINDRYEFPLQLDLDREN 421
YH L A K PP L + L RF +DF++ K Y FPL+++
Sbjct: 218 YHCGTCDRLVKAAKSAKLRKLPPFLTVSLLRFNFDFVKCERYKETSCYTFPLRIN----- 272
Query: 422 GKYLSPDADRS----VRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKE 477
L P ++S + +Y L SV++H GG +GGHY+ +I+ ++F +E+ +K
Sbjct: 273 ---LKPFCEQSELDDLEYIYDLFSVIIHKGGCYGGHYHVYIKDVDHLGNWQFQEEK-SKP 328
Query: 478 DV 479
DV
Sbjct: 329 DV 330
>sp|Q8BWR4|UBP40_MOUSE Ubiquitin carboxyl-terminal hydrolase 40 OS=Mus musculus GN=Usp40
PE=1 SV=2
Length = 1235
Score = 163 bits (412), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 105/282 (37%), Positives = 144/282 (51%), Gaps = 24/282 (8%)
Query: 194 TGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTE------NDLPSGS---IPLAL 244
T G++NQG TCY++SLLQTL+ P FR+A++ + E D P IPL L
Sbjct: 38 TNLSGIRNQGGTCYLSSLLQTLHFTPEFREALFSLGPEELGSLEDKDKPDAKVRIIPLQL 97
Query: 245 QSLFYKLQYNDTSVA-TKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVVEGT 303
Q LF +L D A T +LT SFGW + QHDVQELNR+L LE + GT
Sbjct: 98 QRLFAQLLLLDQEAASTIDLTDSFGWTNDEEMRQHDVQELNRILFSALETSLVGTSGHDL 157
Query: 304 IQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASF-DKYVEVERLEGDNK 362
I +L+ G +N I C S R+E F DL + VK + + YVE E + DN
Sbjct: 158 IHRLYHGTIVNQIVCKECKNISERQEDFLDLTVAVKNVSGLEDELCNMYVEEEIFDYDNL 217
Query: 363 YHAEEHG-LQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDAMVKINDRYEFPLQLDLDREN 421
YH L A K PP L + L RF +DF++ K Y FPL+++
Sbjct: 218 YHCGTCDRLVKAAKSAKLRKLPPFLTISLLRFNFDFVKCERYKDTSCYTFPLRIN----- 272
Query: 422 GKYLSPDADRS----VRNLYTLHSVLVHSGGVHGGHYYAFIR 459
L P ++S + +Y L SV++H GG +GGHY+ +I+
Sbjct: 273 ---LKPFCEQSELDDMEYMYDLFSVIIHKGGCYGGHYHVYIK 311
>sp|Q3V0C5|UBP48_MOUSE Ubiquitin carboxyl-terminal hydrolase 48 OS=Mus musculus GN=Usp48
PE=1 SV=2
Length = 1052
Score = 150 bits (378), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 114/350 (32%), Positives = 167/350 (47%), Gaps = 33/350 (9%)
Query: 189 DSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDLPSG---------- 238
+ +K+ +VGL N GATCY+N+ LQ + R+A+Y P+T +D G
Sbjct: 81 ERRKKNSFVGLTNLGATCYVNTFLQVWFLNLELRQALYLCPSTCSDYTKGDGIHGGKDYE 140
Query: 239 --SIPLALQSLFYKLQ-YNDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLED-- 293
+I LQ LF LQ N + K+ G DT Q D QE +++ LED
Sbjct: 141 PQTICEHLQYLFALLQNSNRRYIDPSGFVKALGLDT---GQQQDAQEFSKLFMSLLEDTL 197
Query: 294 -KMKGTVVEGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYV 352
K K V +QQ F G + C +S FY+L+L+++G + + +++
Sbjct: 198 SKQKNPDVRNVVQQQFCGEYAYVTVCNQCGRESKLVSKFYELELNIQGHKQLTDCISEFL 257
Query: 353 EVERLEGDNKYHAEE-HGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDAMVKINDRYEF 411
+ ERLEGDN+Y E Q+A + + + P L LQL RF +D K+N F
Sbjct: 258 KEERLEGDNRYFCENCQSKQNATRKIRLLSLPCTLNLQLMRFVFDRQTGHKKKLNAYIGF 317
Query: 412 PLQLDLDRENGKYLSPDADRSVRNLYTLHSVLVHSG-GVHGGHYYAFIRPTLSDQWYKFD 470
LD++ Y+ V Y L +VL+H G + GHY A ++ S +WYKF+
Sbjct: 318 SESLDME----PYVEHKGGSFV---YELSAVLIHRGVSAYSGHYIAHVKDPQSGEWYKFN 370
Query: 471 DERVTKEDVKRALEEQYGGEEELPPTNPGFNNTPF-KFTKYS-NAYMLVY 518
DE + K + K+ Q G EE+L P+ K T S NAYMLVY
Sbjct: 371 DEDIEKMEGKKL---QLGIEEDLEPSKSQTRKPKCGKGTHCSRNAYMLVY 417
>sp|Q70CQ2|UBP34_HUMAN Ubiquitin carboxyl-terminal hydrolase 34 OS=Homo sapiens GN=USP34
PE=1 SV=2
Length = 3546
Score = 148 bits (374), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 109/366 (29%), Positives = 174/366 (47%), Gaps = 36/366 (9%)
Query: 184 DYWSY-DSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDLPSGSIPL 242
DYW + D + E +VGL N GATCY+ S +Q LY IP R+AV+ +E D+ + L
Sbjct: 1880 DYWPHEDVRAECRFVGLTNLGATCYLASTIQQLYMIPEARQAVFTAKYSE-DMKHKTTLL 1938
Query: 243 ALQSLF-YKLQYNDTSVATKELTKSFGWDT--YDSFMQHDVQELNRVLCEKLEDKMKGTV 299
LQ +F Y ++ + + K++ D ++ Q D+ E L K+E+
Sbjct: 1939 ELQKMFTYLMESECKAYNPRPFCKTYTMDKQPLNTGEQKDMTEFFTDLITKIEE--MSPE 1996
Query: 300 VEGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERLEG 359
++ T++ LF G N + ++ ++ S E FY ++ V +++Y S D+ + LEG
Sbjct: 1997 LKNTVKSLFGGVITNNVVSLDCEHVSQTAEEFYTVRCQVADMKNIYESLDEVTIKDTLEG 2056
Query: 360 DNKYHAEEHGLQ-DAKKGVLFIDFPPVLQLQLKRFEYDFMRDAMVKINDRYEFPLQLDLD 418
DN Y G + A+K F P +L R+ ++ + K+N + FPL+LD+
Sbjct: 2057 DNMYTCSHCGKKVRAEKRACFKKLPRILSFNTMRYTFNMVTMMKEKVNTHFSFPLRLDMT 2116
Query: 419 -------------RENGKYLSPDADRSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTL--- 462
+E K +S + S Y L V VH+G GGHYY+FIR +
Sbjct: 2117 PYTEDFLMGKSERKEGFKEVSDHSKDSESYEYDLIGVTVHTGTADGGHYYSFIRDIVNPH 2176
Query: 463 ---SDQWYKFDDERVTKEDVKRALEEQYGGEEELPPTNPGFNNTP-----FKFTKYSNAY 514
+++WY F+D V D + E +GGE T +++ F F K +AY
Sbjct: 2177 AYKNNKWYLFNDAEVKPFDSAQLASECFGGEM----TTKTYDSVTDKFMDFSFEKTHSAY 2232
Query: 515 MLVYIR 520
ML Y R
Sbjct: 2233 MLFYKR 2238
>sp|Q6ZQ93|UBP34_MOUSE Ubiquitin carboxyl-terminal hydrolase 34 OS=Mus musculus GN=Usp34
PE=1 SV=3
Length = 3582
Score = 148 bits (373), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 108/366 (29%), Positives = 175/366 (47%), Gaps = 36/366 (9%)
Query: 184 DYWSY-DSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDLPSGSIPL 242
DYW + D + E +VGL N GATCY+ S +Q LY IP R+AV+ +E D+ + L
Sbjct: 1917 DYWPHEDVRAECRFVGLTNLGATCYLASTIQQLYMIPEARQAVFTAKYSE-DMKHKTTLL 1975
Query: 243 ALQSLF-YKLQYNDTSVATKELTKSFGWDT--YDSFMQHDVQELNRVLCEKLEDKMKGTV 299
LQ +F Y ++ + + K++ D ++ Q D+ E L K+E+
Sbjct: 1976 ELQKMFTYLMESECKAYNPRPFCKTYTMDKQPLNTGEQKDMTEFFTDLITKVEE--MSPE 2033
Query: 300 VEGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERLEG 359
++ T++ LF G N + ++ ++ S E FY ++ V +++Y S D+ + LEG
Sbjct: 2034 LKNTVKSLFGGVITNNVVSLDCEHVSQTAEEFYTVRCQVADMKNIYESLDEVTIKDTLEG 2093
Query: 360 DNKYHAEEHGLQ-DAKKGVLFIDFPPVLQLQLKRFEYDFMRDAMVKINDRYEFPLQLDLD 418
DN Y G + A+K F P +L R+ ++ + K+N + FPL+LD+
Sbjct: 2094 DNMYTCSHCGKKVRAEKRACFKKLPRILSFNTMRYTFNMVTMMKEKVNTHFSFPLRLDMT 2153
Query: 419 RENGKYLSPDADR--SVRNL-----------YTLHSVLVHSGGVHGGHYYAFIRPTL--- 462
+L +DR +++ Y L V VH+G GGHYY+FIR +
Sbjct: 2154 PYTEDFLMGKSDRKEGFKDVGDRSKDTESYEYDLIGVTVHTGTADGGHYYSFIRDIVNPH 2213
Query: 463 ---SDQWYKFDDERVTKEDVKRALEEQYGGEEELPPTNPGFNNTP-----FKFTKYSNAY 514
+++WY F+D V D + E +GGE T +++ F F K +AY
Sbjct: 2214 AYKNNKWYLFNDAEVKPFDSAQLASECFGGEM----TTKTYDSVTDKFMDFSFEKTHSAY 2269
Query: 515 MLVYIR 520
ML Y R
Sbjct: 2270 MLFYKR 2275
>sp|Q86UV5|UBP48_HUMAN Ubiquitin carboxyl-terminal hydrolase 48 OS=Homo sapiens GN=USP48
PE=1 SV=1
Length = 1035
Score = 146 bits (368), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 113/355 (31%), Positives = 168/355 (47%), Gaps = 42/355 (11%)
Query: 189 DSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDLPSG---------- 238
+ +K+ +VGL N GATCY+N+ LQ + R+A+Y P+T +D G
Sbjct: 81 ERRKKNSFVGLTNLGATCYVNTFLQVWFLNLELRQALYLCPSTCSDYMLGDGIQEEKDYE 140
Query: 239 --SIPLALQSLFYKLQ-YNDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLED-- 293
+I LQ LF LQ N + K+ G DT Q D QE +++ LED
Sbjct: 141 PQTICEHLQYLFALLQNSNRRYIDPSGFVKALGLDT---GQQQDAQEFSKLFMSLLEDTL 197
Query: 294 -KMKGTVVEGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYV 352
K K V +QQ F G + C +S FY+L+L+++G + + +++
Sbjct: 198 SKQKNPDVRNIVQQQFCGEYAYVTVCNQCGRESKLLSKFYELELNIQGHKQLTDCISEFL 257
Query: 353 EVERLEGDNKYHAEE-HGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDAMVKINDRYEF 411
+ E+LEGDN+Y E Q+A + + + P L LQL RF +D K+N F
Sbjct: 258 KEEKLEGDNRYFCENCQSKQNATRKIRLLSLPCTLNLQLMRFVFDRQTGHKKKLNTYIGF 317
Query: 412 PLQLDL----DRENGKYLSPDADRSVRNLYTLHSVLVHSG-GVHGGHYYAFIRPTLSDQW 466
LD+ + + G Y +Y L +VL+H G + GHY A ++ S +W
Sbjct: 318 SEILDMEPYVEHKGGSY-----------VYELSAVLIHRGVSAYSGHYIAHVKDPQSGEW 366
Query: 467 YKFDDERVTKEDVKRALEEQYGGEEELPPTNPGFNNTP--FKFTKYS-NAYMLVY 518
YKF+DE + K + K+ Q G EE+L + P K T S NAYMLVY
Sbjct: 367 YKFNDEDIEKMEGKKL---QLGIEEDLAEPSKSQTRKPKCGKGTHCSRNAYMLVY 418
>sp|Q76LT8|UBP48_RAT Ubiquitin carboxyl-terminal hydrolase 48 OS=Rattus norvegicus
GN=Usp48 PE=1 SV=1
Length = 1036
Score = 145 bits (367), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 113/351 (32%), Positives = 166/351 (47%), Gaps = 34/351 (9%)
Query: 189 DSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDLPSG---------- 238
+ +K+ +VGL N GA+CY+N+ LQ + R+A+Y P+T +D G
Sbjct: 81 ERRKKNSFVGLTNLGASCYVNTFLQVWFLNLELRQALYLCPSTCSDYTKGDGIRGGKDYE 140
Query: 239 --SIPLALQSLFYKLQ-YNDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLED-- 293
+I LQ LF LQ N + K+ G DT Q D QE +++ LED
Sbjct: 141 PQTICEHLQYLFALLQNSNRRYIDPSGFVKALGLDT---GQQQDAQESSKLFMSLLEDTL 197
Query: 294 -KMKGTVVEGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYV 352
K K V +QQ F G + C +S FY+L+L+++G + + +++
Sbjct: 198 SKQKNPDVRNVVQQQFCGEYAYVTVCSQCGRESKLVSKFYELELNIQGHKQLTDCISEFL 257
Query: 353 EVERLEGDNKYHAEE-HGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDAMVKINDRYEF 411
+ ERLEGDN+Y E Q+A + + + P L LQL RF +D K+N F
Sbjct: 258 KEERLEGDNRYFCENCQSKQNATRKIRLLSLPCTLNLQLMRFVFDRQTGHKKKLNAYIGF 317
Query: 412 PLQLDLDRENGKYLSPDADRSVRNLYTLHSVLVHSG-GVHGGHYYAFIRPTLSDQWYKFD 470
LD++ Y+ V Y L +VL+H G + GHY A ++ S WYKF+
Sbjct: 318 SESLDME----PYVEHKGGSFV---YELSAVLIHRGVSAYSGHYIAHVKDPQSGDWYKFN 370
Query: 471 DERVTKEDVKRALEEQYGGEEELPPTNPGFNNTP--FKFTKYS-NAYMLVY 518
DE + K + K+ Q G EE+L + P K T S NAYMLVY
Sbjct: 371 DEDIEKMEGKKL---QLGIEEDLTEPSKSQTRKPKCGKGTHCSRNAYMLVY 418
>sp|Q5ZM45|UBP48_CHICK Ubiquitin carboxyl-terminal hydrolase 48 OS=Gallus gallus GN=USP48
PE=2 SV=1
Length = 1033
Score = 140 bits (352), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 109/353 (30%), Positives = 168/353 (47%), Gaps = 40/353 (11%)
Query: 189 DSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTEN----------DLPSG 238
+ +K+ +VGL N GATCY+N+ LQ + R+A+Y + E+ D
Sbjct: 81 ERRKKNAFVGLTNLGATCYVNTFLQMWFLNLELRQALYLCSSNEHAAGESIPKDKDYEPQ 140
Query: 239 SIPLALQSLFYKLQYNDTS-VATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLED---K 294
+I LQ LF LQ + + K+ G DT Q D QE +++ LED K
Sbjct: 141 TICEHLQYLFALLQNSKRRYIDPSGFVKALGLDT---GQQQDAQEFSKLFMSLLEDTLSK 197
Query: 295 MKGTVVEGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEV 354
K V +Q+ F G + C +S FY+L+L+++G + + ++++
Sbjct: 198 QKNPDVRNIVQKQFCGEYAYVTVCNQCGRESKLVSKFYELELNIQGHKQLTDCITEFLKE 257
Query: 355 ERLEGDNKYHAEE-HGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDAMVKINDRYEFPL 413
E+LEGDN+Y E Q+A + + + P L LQL RF +D K+N F
Sbjct: 258 EKLEGDNRYFCETCQSKQNATRKIRLLSLPCTLNLQLMRFVFDRQTGHKKKLNTYIGFSE 317
Query: 414 QLD----LDRENGKYLSPDADRSVRNLYTLHSVLVHSG-GVHGGHYYAFIRPTLSDQWYK 468
LD ++++NG Y +Y L +VL+H G + GHY A ++ + +WYK
Sbjct: 318 LLDMEPFMEQKNGVY-----------VYELSAVLIHRGVSAYSGHYIAHVKDPQTGEWYK 366
Query: 469 FDDERVTKEDVKRALEEQYGGEEELPPTNPGFNNTP--FKFTKYS-NAYMLVY 518
F+DE + K + K+ Q G EE+L + P K T S NAYMLVY
Sbjct: 367 FNDEDIEKMEGKKL---QLGIEEDLAEPSKSQTRKPKCGKGTHCSRNAYMLVY 416
>sp|B1AY13|UBP24_MOUSE Ubiquitin carboxyl-terminal hydrolase 24 OS=Mus musculus GN=Usp24
PE=1 SV=1
Length = 2617
Score = 139 bits (349), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 113/383 (29%), Positives = 179/383 (46%), Gaps = 40/383 (10%)
Query: 178 AVRKVLDYWS-YDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDLP 236
A+ K DY DS+ +G+VGL+N GATCYMN++ Q LY P +++ + ++
Sbjct: 1666 ALTKEFDYLPPVDSRSSSGFVGLRNGGATCYMNAVFQQLYMQPGLPESLLSVDDDTDNP- 1724
Query: 237 SGSIPLALQSLF-----YKLQYNDTSVATKELTKSFGWDTYDSFM--QHDVQELNRVLCE 289
S+ +QSLF KLQY + K F + ++ Q D E L +
Sbjct: 1725 DDSVFYQVQSLFGHLMESKLQY----YVPENFWKIFKMWNKELYVREQQDAYEFFTSLID 1780
Query: 290 KLEDKMKGTVVEGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFD 349
++++ +K E + F+G + + C + ++ R+E+F L L V C+ + S D
Sbjct: 1781 QMDEYLKKMGREQIFKNTFQGIYSDQKICKDCPHRYEREEAFMALNLGVTSCQSLEISLD 1840
Query: 350 KYVEVERLEGDNKYHAEEHGLQDAK-KGVLFIDFPPVLQLQLKRFEYDFMRDAMVKINDR 408
++V E LEG N Y+ E+ + K P VL + L RF +D+ +K +++
Sbjct: 1841 QFVRGEVLEGSNAYYCEKCKEKRITVKRTCIKSLPSVLVIHLMRFGFDWESGRSIKYDEQ 1900
Query: 409 YEFPLQLDLD----------------RENGKYL------SPDADRSVRNLYTLHSVLVHS 446
FP L+++ ENG+ + SP ++ Y L V+VHS
Sbjct: 1901 IRFPWMLNMEPYTVAGMARQDSSSEVGENGRNMDQGGGGSPRKKVALTENYELVGVIVHS 1960
Query: 447 GGVHGGHYYAFI---RPTLSDQWYKFDDERVTKEDVK-RALEEQYGGEEELPPTNPGFNN 502
G H GHYY+FI R +WYKF+D + + D+ LE + G E P N
Sbjct: 1961 GQAHAGHYYSFIKDRRGCGKGKWYKFNDTVIEEFDLNDETLEYECFGGEYRPKVYDQTNP 2020
Query: 503 TPFKFTKYSNAYMLVYIRESDKD 525
+Y NAYML Y R SD++
Sbjct: 2021 YTDVRRRYWNAYMLFYQRVSDQN 2043
>sp|Q9UPU5|UBP24_HUMAN Ubiquitin carboxyl-terminal hydrolase 24 OS=Homo sapiens GN=USP24
PE=1 SV=3
Length = 2620
Score = 137 bits (345), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 112/383 (29%), Positives = 179/383 (46%), Gaps = 40/383 (10%)
Query: 178 AVRKVLDYWS-YDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDLP 236
A+ K DY DS+ +G+VGL+N GATCYMN++ Q LY P +++ + ++
Sbjct: 1669 ALTKEFDYLPPVDSRSSSGFVGLRNGGATCYMNAVFQQLYMQPGLPESLLSVDDDTDNP- 1727
Query: 237 SGSIPLALQSLF-----YKLQYNDTSVATKELTKSFGWDTYDSFM--QHDVQELNRVLCE 289
S+ +QSLF KLQY + K F + ++ Q D E L +
Sbjct: 1728 DDSVFYQVQSLFGHLMESKLQY----YVPENFWKIFKMWNKELYVREQQDAYEFFTSLID 1783
Query: 290 KLEDKMKGTVVEGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFD 349
++++ +K + + F+G + + C + ++ R+E+F L L V C+ + S D
Sbjct: 1784 QMDEYLKKMGRDQIFKNTFQGIYSDQKICKDCPHRYEREEAFMALNLGVTSCQSLEISLD 1843
Query: 350 KYVEVERLEGDNKYHAEEHGLQDAK-KGVLFIDFPPVLQLQLKRFEYDFMRDAMVKINDR 408
++V E LEG N Y+ E+ + K P VL + L RF +D+ +K +++
Sbjct: 1844 QFVRGEVLEGSNAYYCEKCKEKRITVKRTCIKSLPSVLVIHLMRFGFDWESGRSIKYDEQ 1903
Query: 409 YEFPLQLDLD----------------RENGKYL------SPDADRSVRNLYTLHSVLVHS 446
FP L+++ ENG+ + SP ++ Y L V+VHS
Sbjct: 1904 IRFPWMLNMEPYTVSGMARQDSSSEVGENGRSVDQGGGGSPRKKVALTENYELVGVIVHS 1963
Query: 447 GGVHGGHYYAFI---RPTLSDQWYKFDDERVTKEDVK-RALEEQYGGEEELPPTNPGFNN 502
G H GHYY+FI R +WYKF+D + + D+ LE + G E P N
Sbjct: 1964 GQAHAGHYYSFIKDRRGCGKGKWYKFNDTVIEEFDLNDETLEYECFGGEYRPKVYDQTNP 2023
Query: 503 TPFKFTKYSNAYMLVYIRESDKD 525
+Y NAYML Y R SD++
Sbjct: 2024 YTDVRRRYWNAYMLFYQRVSDQN 2046
>sp|A2XDG4|UBP26_ORYSI Ubiquitin carboxyl-terminal hydrolase 26 OS=Oryza sativa subsp.
indica GN=UBP26 PE=2 SV=1
Length = 1079
Score = 131 bits (330), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 121/443 (27%), Positives = 192/443 (43%), Gaps = 63/443 (14%)
Query: 121 AVVNQIHSKYSIRKDTQHQF-------------NARESDWGFTSFMPLGDLYDPSRGYLV 167
AV +IHS +I K Q N+++S F +P + S +
Sbjct: 23 AVFKKIHSTGAITKGDIKQLYMVWKPVCHGCHGNSKDSPNCFCGLIPAANGVRKSGLWQR 82
Query: 168 NDSVVVEAEVAVRKVLDYWSYDSKKETGY-VGLKNQGATCYMNSLLQTLYHIPYFRKAVY 226
+ ++ R + S D + T GL N GATCY NS+LQ LY FR ++
Sbjct: 83 TNEII-------RALGPNPSTDLRDSTETPAGLTNLGATCYANSILQCLYMNTSFRLGIF 135
Query: 227 HMPTTEND-LPSGSIPLALQSLFYKLQYNDTS-VATKELTKSFGWDTYDSFMQHDVQELN 284
+ E D L + L LF +L + + + + K+ D+ +Q D E
Sbjct: 136 SL---EPDILKMHPVLDQLARLFAQLHSSKMAFIDSAPFIKTL---ELDNGVQQDSHEFL 189
Query: 285 RVLCEKLEDKMKGTVVEGT---IQQLFEG---HHMNYIECINVDYKSTRKESFYDLQLDV 338
+ LE + + V G +Q LF G H C S++ E FY+L+L++
Sbjct: 190 TLFLSLLEGSLSHSKVPGARTIVQHLFRGSVSHVTRCSSCGRDSEASSKMEDFYELELNI 249
Query: 339 KGCRDVYASFDKYVEVERLEGDNKYHAEEHGLQ-DAKKGVLFIDFPPVLQLQLKRFEYDF 397
KG ++ S D Y+ E L+G+N+Y E + DA + + PPV+ QLKR+ +
Sbjct: 250 KGLNNLEQSLDDYLSTEALDGENQYFCESCQKRVDATRCIKLRSLPPVVNFQLKRYVFLP 309
Query: 398 MRDAMVKINDRYEFPLQLDLDRENGKYLSPDADRSVRNLYTLHSVLVHSG-GVHGGHYYA 456
KI+ + FP QLD+ GK LS + S Y L ++L+H G + GHY A
Sbjct: 310 KTTTKKKISSAFSFPGQLDM----GKRLS---NPSSSYTYGLSAILIHKGSAANSGHYVA 362
Query: 457 FIRPTLSDQWYKFDDERVTK-----------EDVKRALEEQYGGEEELPPTN-------- 497
++ + QW++FDDE V+K + + ++ G TN
Sbjct: 363 HVKDESNGQWWEFDDEHVSKLGLHPFGEKPGKSSNKTDQKPQGSSTADSVTNDDNNSCHE 422
Query: 498 PGFNNTPFKFTKYSNAYMLVYIR 520
F +T + ++AYML+Y R
Sbjct: 423 AAFTSTMEEMFSSTDAYMLMYKR 445
>sp|A3AF13|UBP26_ORYSJ Ubiquitin carboxyl-terminal hydrolase 26 OS=Oryza sativa subsp.
japonica GN=UBP26 PE=2 SV=2
Length = 1079
Score = 131 bits (329), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 110/380 (28%), Positives = 172/380 (45%), Gaps = 44/380 (11%)
Query: 121 AVVNQIHSKYSIRKDTQHQF-------------NARESDWGFTSFMPLGDLYDPSRGYLV 167
AV +IHS +I K Q N+++S F +P + S +
Sbjct: 23 AVFKKIHSTGAITKGDIKQLYMVWKPVCHGCHGNSKDSPNCFCGLIPAANGVRKSGLWQR 82
Query: 168 NDSVVVEAEVAVRKVLDYWSYDSKKETGY-VGLKNQGATCYMNSLLQTLYHIPYFRKAVY 226
+ ++ R + S D + T GL N GATCY NS+LQ LY FR ++
Sbjct: 83 TNEII-------RALGPNPSTDLRDSTETPAGLTNLGATCYANSILQCLYMNTSFRLGIF 135
Query: 227 HMPTTEND-LPSGSIPLALQSLFYKLQYNDTS-VATKELTKSFGWDTYDSFMQHDVQELN 284
+ E D L + L LF +L + + + + K+ D+ +Q D E
Sbjct: 136 SL---EPDILKMHPVLDQLARLFAQLHSSKMAFIDSAPFIKTL---ELDNGVQQDSHEFL 189
Query: 285 RVLCEKLEDKMKGTVVEGT---IQQLFEG---HHMNYIECINVDYKSTRKESFYDLQLDV 338
+ LE + + V G +Q LF G H C S++ E FY+L+L++
Sbjct: 190 TLFLSLLEGSLSHSKVPGARTIVQHLFRGSVSHVTRCSSCGRDSEASSKMEDFYELELNI 249
Query: 339 KGCRDVYASFDKYVEVERLEGDNKYHAEEHGLQ-DAKKGVLFIDFPPVLQLQLKRFEYDF 397
KG ++ S D Y+ E L+G+N+Y E + DA + + PPV+ QLKR+ +
Sbjct: 250 KGLNNLEQSLDDYLSTEALDGENQYFCESCQKRVDATRCIKLRSLPPVVNFQLKRYVFLP 309
Query: 398 MRDAMVKINDRYEFPLQLDLDRENGKYLSPDADRSVRNLYTLHSVLVHSG-GVHGGHYYA 456
KI+ + FP QLD+ GK LS + S Y L ++L+H G + GHY A
Sbjct: 310 KTTTKKKISSAFSFPGQLDM----GKRLS---NPSSSYTYGLSAILIHKGSAANSGHYVA 362
Query: 457 FIRPTLSDQWYKFDDERVTK 476
++ + QW++FDDE V+K
Sbjct: 363 HVKDESNGQWWEFDDEHVSK 382
>sp|P55824|FAF_DROME Probable ubiquitin carboxyl-terminal hydrolase FAF OS=Drosophila
melanogaster GN=faf PE=1 SV=2
Length = 2778
Score = 130 bits (326), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 114/412 (27%), Positives = 171/412 (41%), Gaps = 74/412 (17%)
Query: 183 LDYWSY----DSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVY--HMPTT----- 231
L W Y ++ G+ GLKN GATCYMNS+LQ LY +P R + H T
Sbjct: 1650 LREWDYLPPVGARPTKGFCGLKNAGATCYMNSVLQQLYMVPAVRVGILRAHGAATTDGED 1709
Query: 232 ---ENDLPSGSIPLAL------------------QSLFYKLQYNDTSVATKELTKSFGWD 270
++DL G + AL + + ++ N V K + F
Sbjct: 1710 FSGDSDLTGGGLGSALFSGPASALVSLPSSSSTIEDGLHDVRKNYHVVILKHVQAIFAHL 1769
Query: 271 TYDSFM----------------------QHDVQELNRVLCEKLEDKMKGTVVEGTIQQLF 308
+ + Q D E L E L++ +K +
Sbjct: 1770 GHSALQYYVPRGLWTHFKLLGEPVNLREQQDAVEFFMSLLESLDEGLKALGQPQLMNATL 1829
Query: 309 EGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERLEGDNKYHAEEH 368
G + C ++ +++E F +D++ + S ++YV+ E LEG + YH ++
Sbjct: 1830 GGSFSDQKICQECPHRYSKEEPFSVFSVDIRNHSSLTESLEQYVKGELLEGADAYHCDKC 1889
Query: 369 GLQDAK-KGVLFIDFPPVLQLQLKRFEYDFMRDAMVKINDRYEFPLQLDLDRENGKYLSP 427
+ K V PPVL +QLKRFEYD+ R +K ND +EFP LD++ L+
Sbjct: 1890 DKKVVTVKRVCVKKLPPVLAIQLKRFEYDYERVCAIKFNDYFEFPRILDMEPYTVSGLAK 1949
Query: 428 -------DADRSVRNL----YTLHSVLVHSGGVHGGHYYAFI---RPTLSD-QWYKFDDE 472
D N+ Y L ++VHSG GGHY+++I P QWYKFDD
Sbjct: 1950 LEGEVVEVGDNCQTNVETTKYELTGIVVHSGQASGGHYFSYILSKNPANGKCQWYKFDDG 2009
Query: 473 RVTKEDVKRALE---EQYGGEEELPPTNPGFNNTPFKFTK-YSNAYMLVYIR 520
VT+ + E E +GGE + ++ K + NAYML Y R
Sbjct: 2010 EVTECKMHEDEEMKAECFGGEYMGETYDNNLKRMQYRRQKRWWNAYMLFYTR 2061
>sp|Q9SCJ9|UBP26_ARATH Ubiquitin carboxyl-terminal hydrolase 26 OS=Arabidopsis thaliana
GN=UBP26 PE=1 SV=3
Length = 1067
Score = 124 bits (310), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 93/292 (31%), Positives = 142/292 (48%), Gaps = 19/292 (6%)
Query: 193 ETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDLPSGSIPLALQSLFYKLQ 252
E+ GL N GATCY NS+LQ LY FR+ V+ + + L + + LF +L
Sbjct: 102 ESTPAGLTNLGATCYANSILQCLYMNTAFREGVFSVEV--HVLKQNPVLDQIARLFAQLH 159
Query: 253 YNDTS-VATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKM--KGTVVEGTIQQLFE 309
+ S V + K+ D+ +Q D E +L LE + G + +Q LF
Sbjct: 160 ASQKSFVDSDAFVKTL---ELDNGVQQDTHEFLTLLLSLLERCLLHSGVKAKTIVQDLFS 216
Query: 310 G---HHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERLEGDNKYHAE 366
G H +C S++ E FY L+L+VKG + + AS + Y+ +E+L GDN+Y
Sbjct: 217 GSVSHVTTCSKCGRDSEASSKMEDFYALELNVKGLKSLDASLNDYLSLEQLNGDNQYFCG 276
Query: 367 EHGLQ-DAKKGVLFIDFPPVLQLQLKRFEYDFMRDAMVKINDRYEFPLQLDLDRENGKYL 425
+ DA + + PPV+ QLKR + A KI + FP LD+ G L
Sbjct: 277 SCNARVDATRCIKLRTLPPVITFQLKRCIFLPKTTAKKKITSSFSFPQVLDM----GSRL 332
Query: 426 SPDADRSVRNLYTLHSVLVHSG-GVHGGHYYAFIRPTLSDQWYKFDDERVTK 476
+ + + Y L +VL+H G V+ GHY A I+ + W++FDDE V++
Sbjct: 333 AESSQNKL--TYDLSAVLIHKGSAVNSGHYVAHIKDEKTGLWWEFDDEHVSE 382
>sp|P70398|USP9X_MOUSE Probable ubiquitin carboxyl-terminal hydrolase FAF-X OS=Mus musculus
GN=Usp9x PE=1 SV=2
Length = 2559
Score = 119 bits (299), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 137/273 (50%), Gaps = 29/273 (10%)
Query: 277 QHDVQELNRVLCEKLEDKMKGTVVEGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQL 336
QHD E L + L++ +K + ++ G + C ++ +ESF L +
Sbjct: 1683 QHDALEFFNSLVDSLDEALKALGHPAMLSKVLGGSFADQKICQGCPHRYECEESFTTLNV 1742
Query: 337 DVKGCRDVYASFDKYVEVERLEGDNKYHAEEHGLQ-DAKKGVLFIDFPPVLQLQLKRFEY 395
D++ +++ S ++YV+ + LEG N YH E+ + D K +L PPVL +QLKRF+Y
Sbjct: 1743 DIRNHQNLLDSLEQYVKGDLLEGANAYHCEKCNKKVDTVKRLLIKKLPPVLAIQLKRFDY 1802
Query: 396 DFMRDAMVKINDRYEFPLQLDLD--------RENGKYLSP-----------DADRSVRNL 436
D+ R+ +K ND +EFP +LD++ + G ++P +++++
Sbjct: 1803 DWERECAIKFNDYFEFPRELDMEPYTVAGVAKLEGDNVNPESQLIQQNEQSESEKAGSTK 1862
Query: 437 YTLHSVLVHSGGVHGGHYYAFI-----RPTLSDQWYKFDDERVTK---EDVKRALEEQYG 488
Y L VLVHSG GGHYY++I ++WYKFDD VT+ +D + + +G
Sbjct: 1863 YRLVGVLVHSGQASGGHYYSYIIQRNGGDGEKNRWYKFDDGDVTECKMDDDEEMKNQCFG 1922
Query: 489 GEEELPPTNPGFNNTPFKFTK-YSNAYMLVYIR 520
GE + ++ K + NAY+L Y R
Sbjct: 1923 GEYMGEVFDHMMKRMSYRRQKRWWNAYILFYER 1955
Score = 54.3 bits (129), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 173 VEAEVAVRKVLDYWSY----DSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHM 228
+ + + L W Y + G+VGLKN GATCYMNS++Q LY IP R + +
Sbjct: 1529 IGTAITTCEALTEWEYLPPVGPRPPKGFVGLKNAGATCYMNSVIQQLYMIPSIRNGILAI 1588
Query: 229 PTTENDL 235
T +D+
Sbjct: 1589 EGTGSDV 1595
>sp|Q93008|USP9X_HUMAN Probable ubiquitin carboxyl-terminal hydrolase FAF-X OS=Homo sapiens
GN=USP9X PE=1 SV=3
Length = 2570
Score = 119 bits (297), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 138/279 (49%), Gaps = 29/279 (10%)
Query: 277 QHDVQELNRVLCEKLEDKMKGTVVEGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQL 336
QHD E L + L++ +K + ++ G + C ++ +ESF L +
Sbjct: 1683 QHDALEFFNSLVDSLDEALKALGHPAMLSKVLGGSFADQKICQGCPHRYECEESFTTLNV 1742
Query: 337 DVKGCRDVYASFDKYVEVERLEGDNKYHAEEHGLQ-DAKKGVLFIDFPPVLQLQLKRFEY 395
D++ +++ S ++YV+ + LEG N YH E+ + D K +L PPVL +QLKRF+Y
Sbjct: 1743 DIRNHQNLLDSLEQYVKGDLLEGANAYHCEKCNKKVDTVKRLLIKKLPPVLAIQLKRFDY 1802
Query: 396 DFMRDAMVKINDRYEFPLQLDLD--------RENGKYLSP-----------DADRSVRNL 436
D+ R+ +K ND +EFP +LD++ + G ++P +++ +
Sbjct: 1803 DWERECAIKFNDYFEFPRELDMEPYTVAGVAKLEGDNVNPESQLIQQSEQSESETAGSTK 1862
Query: 437 YTLHSVLVHSGGVHGGHYYAFIRPTLS-----DQWYKFDDERVTK---EDVKRALEEQYG 488
Y L VLVHSG GGHYY++I ++WYKFDD VT+ +D + + +G
Sbjct: 1863 YRLVGVLVHSGQASGGHYYSYIIQRNGGDGERNRWYKFDDGDVTECKMDDDEEMKNQCFG 1922
Query: 489 GEEELPPTNPGFNNTPFKFTK-YSNAYMLVYIRESDKDK 526
GE + ++ K + NAY+L Y R D+
Sbjct: 1923 GEYMGEVFDHMMKRMSYRRQKRWWNAYILFYERMDTIDQ 1961
Score = 54.3 bits (129), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 173 VEAEVAVRKVLDYWSY----DSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHM 228
+ + + L W Y + G+VGLKN GATCYMNS++Q LY IP R + +
Sbjct: 1529 IGTAITTCEALTEWEYLPPVGPRPPKGFVGLKNAGATCYMNSVIQQLYMIPSIRNGILAI 1588
Query: 229 PTTENDL 235
T +D+
Sbjct: 1589 EGTGSDV 1595
>sp|O00507|USP9Y_HUMAN Probable ubiquitin carboxyl-terminal hydrolase FAF-Y OS=Homo sapiens
GN=USP9Y PE=1 SV=2
Length = 2555
Score = 116 bits (290), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 150/314 (47%), Gaps = 32/314 (10%)
Query: 277 QHDVQELNRVLCEKLEDKMKGTVVEGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQL 336
QHD E L + L++ +K + ++ G + C ++ +ESF L +
Sbjct: 1685 QHDALEFFNSLVDSLDEALKALGHPAILSKVLGGSFADQKICQGCPHRYECEESFTTLNV 1744
Query: 337 DVKGCRDVYASFDKYVEVERLEGDNKYHAEEHGLQ-DAKKGVLFIDFPPVLQLQLKRFEY 395
D++ +++ S ++Y++ + LEG N YH E+ + D K +L P VL +QLKRF+Y
Sbjct: 1745 DIRNHQNLLDSLEQYIKGDLLEGANAYHCEKCDKKVDTVKRLLIKKLPRVLAIQLKRFDY 1804
Query: 396 DFMRDAMVKINDRYEFPLQLD-----------LDRENGKYLS--------PDADRSVRNL 436
D+ R+ +K ND +EFP +LD L+R+N + D + +
Sbjct: 1805 DWERECAIKFNDYFEFPRELDMGPYTVAGVANLERDNVNSENELIEQKEQSDNETAGGTK 1864
Query: 437 YTLHSVLVHSGGVHGGHYYAFI-----RPTLSDQWYKFDDERVTK---EDVKRALEEQYG 488
Y L VLVHSG GGHYY++I + +D WYKFDD VT+ +D + + +G
Sbjct: 1865 YRLVGVLVHSGQASGGHYYSYIIQRNGKDDQTDHWYKFDDGDVTECKMDDDEEMKNQCFG 1924
Query: 489 GEEELPPTNPGFNNTPFKFTK-YSNAYMLVYIRE---SDKDKIICNVDEKDIAEHLRIRL 544
GE + ++ K + NAY+L Y + + D++I + E IA +I +
Sbjct: 1925 GEYMGEVFDHMMKRMSYRRQKRWWNAYILFYEQMDMIDEDDEMIRYISELTIARPHQIIM 1984
Query: 545 KKEQEEKEDKRRYK 558
E K+ K
Sbjct: 1985 SPAIERSVRKQNVK 1998
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 4/63 (6%)
Query: 177 VAVRKVLDYWSY----DSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTE 232
+ + L W Y + G+VGLKN GATCYMNS++Q LY IP R ++ + T
Sbjct: 1535 ITTCEALTEWEYLPPVGPRPPKGFVGLKNAGATCYMNSVIQQLYMIPSIRNSILAIEGTG 1594
Query: 233 NDL 235
+DL
Sbjct: 1595 SDL 1597
>sp|A4FUN7|UBP12_DANRE Ubiquitin carboxyl-terminal hydrolase 12A OS=Danio rerio GN=usp12a
PE=2 SV=1
Length = 371
Score = 115 bits (288), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 101/332 (30%), Positives = 152/332 (45%), Gaps = 48/332 (14%)
Query: 196 YVGLKNQGATCYMNSLLQTLYHIPYFRKAVY---HMPTTENDLPSGSIPLALQSLFYKLQ 252
Y GL N G TCY NS+LQ LY FR+ + P + +L + L LF+ +
Sbjct: 38 YFGLVNFGNTCYCNSVLQALYFCRPFREKILAYRSQPRRKENLLT-----CLADLFHSIA 92
Query: 253 YNDTSVAT----KELTKSFGWD-TYDSFMQHDVQE-LNRVLC--------EKLEDKMKGT 298
V K +T+ + +D++MQ D E LN +L E+ +DK G
Sbjct: 93 NQKRKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADLLQEERKQDKQNGK 152
Query: 299 VVEGT---------------IQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRD 343
+ GT + ++F+G N C+ + S++ E F DL +DV+
Sbjct: 153 LANGTLDSQNNNSTPPSTTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNTS 212
Query: 344 VYASFDKYVEVERLEGDNKYHAEE-HGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDAM 402
+ + E L + KY+ EE Q+A K + P +L L LKRF+Y
Sbjct: 213 ITHCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMRVKKLPMILALHLKRFKYMEQLQRY 272
Query: 403 VKINDRYEFPLQLDLDRENGKYLSPDADRSVRNLYTLHSVLVHSG-GVHGGHYYAFIRPT 461
K++ R FPL+L L +G +P+ LY L +V+VH G G + GHY A ++
Sbjct: 273 TKLSYRVVFPLELRLFNTSGDATNPE------RLYDLVAVVVHCGSGPNRGHYIAIVKS- 325
Query: 462 LSDQWYKFDDERVTKEDVKRALEEQYGGEEEL 493
D W FDD+ V K D + A+EE YG E+
Sbjct: 326 -HDFWLLFDDDIVEKIDAQ-AIEEFYGLTSEI 355
>sp|C0HB46|UBP12_SALSA Ubiquitin carboxyl-terminal hydrolase 12 OS=Salmo salar GN=usp12
PE=2 SV=1
Length = 372
Score = 114 bits (284), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 100/333 (30%), Positives = 152/333 (45%), Gaps = 49/333 (14%)
Query: 196 YVGLKNQGATCYMNSLLQTLYHIPYFRKAVY---HMPTTENDLPSGSIPLALQSLFYKLQ 252
Y GL N G TCY NS+LQ LY FR+ + P + +L + L LF+ +
Sbjct: 38 YFGLVNFGNTCYCNSVLQALYFCRPFREKILAYRSQPRRKENLLT-----CLADLFHSIA 92
Query: 253 YNDTSVAT----KELTKSFGWD-TYDSFMQHDVQE-LNRVLC--------EKLEDKMKGT 298
V K +T+ + +D++MQ D E LN +L E+ +DK G
Sbjct: 93 NQKRKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADLLQEERKQDKTNGR 152
Query: 299 VVEGT----------------IQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCR 342
+ G+ + ++F+G N C+ + S++ E F DL +DV+
Sbjct: 153 LANGSLDSQNHNSNAPPPSTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNT 212
Query: 343 DVYASFDKYVEVERLEGDNKYHAEE-HGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDA 401
+ + E L + KY+ EE Q+A K + P +L L LKRF+Y
Sbjct: 213 SITHCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMRVKKLPMILALHLKRFKYMEQLQR 272
Query: 402 MVKINDRYEFPLQLDLDRENGKYLSPDADRSVRNLYTLHSVLVHSG-GVHGGHYYAFIRP 460
K++ R FPL+L L +G +P+ LY L +V+VH G G + GHY A ++
Sbjct: 273 YTKLSYRVVFPLELRLFNTSGDATNPE------RLYDLVAVVVHCGSGPNRGHYIAIVKS 326
Query: 461 TLSDQWYKFDDERVTKEDVKRALEEQYGGEEEL 493
D W FDD+ V K D + A+EE YG E+
Sbjct: 327 --HDFWLLFDDDIVEKIDAQ-AIEEFYGLTSEI 356
>sp|A5D9H7|UBP12_BOVIN Ubiquitin carboxyl-terminal hydrolase 12 OS=Bos taurus GN=USP12
PE=2 SV=1
Length = 369
Score = 113 bits (283), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 98/322 (30%), Positives = 144/322 (44%), Gaps = 40/322 (12%)
Query: 196 YVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDLPSGSIPLALQSLFYKLQYND 255
Y GL N G TCY NS+LQ LY FR+ V + S+ L LF+ +
Sbjct: 38 YFGLVNFGNTCYCNSVLQALYFCRPFREKV--LAYKSQPRKKESLLTCLADLFHSIATQK 95
Query: 256 TSVATKELTKSFGW-----DTYDSFMQHDVQE-LNRVLC--------EKLEDKMKGTVVE 301
V K + +D++MQ D E LN +L E+ ++K G +
Sbjct: 96 KKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNGRLPN 155
Query: 302 GTI-------------QQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASF 348
G I ++F+G N C+ + S++ E F DL +DV+ +
Sbjct: 156 GNIDSENNSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNTSITHCL 215
Query: 349 DKYVEVERLEGDNKYHAEE-HGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDAMVKIND 407
+ E L + KY+ EE Q+A K + P +L L LKRF+Y K++
Sbjct: 216 RGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSY 275
Query: 408 RYEFPLQLDLDRENGKYLSPDADRSVRNLYTLHSVLVHSG-GVHGGHYYAFIRPTLSDQW 466
R FPL+L L +G +PD +Y L +V+VH G G + GHY A ++ D W
Sbjct: 276 RVVFPLELRLFNTSGDATNPD------RMYDLVAVVVHCGSGPNRGHYIAIVKS--HDFW 327
Query: 467 YKFDDERVTKEDVKRALEEQYG 488
FDD+ V K D + A+EE YG
Sbjct: 328 LLFDDDIVEKIDAQ-AIEEFYG 348
>sp|P50102|UBP8_YEAST Ubiquitin carboxyl-terminal hydrolase 8 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=UBP8 PE=1 SV=1
Length = 471
Score = 112 bits (281), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 98/366 (26%), Positives = 161/366 (43%), Gaps = 59/366 (16%)
Query: 166 LVNDSVVVEA--EVAVRKVLDYWSYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRK 223
L+ND+++ + +V + ++ ++ G GL N G+TC+M+S+LQ L H PYF +
Sbjct: 108 LINDAILAKYWDDVCTKTMVP----SMERRDGLSGLINMGSTCFMSSILQCLIHNPYFIR 163
Query: 224 ---AVYHMPTTENDLPSGSIPLALQSLFYKL-------QYNDTSVATKELTK-----SFG 268
+ H + P AL + ++L Q + +S +T T +
Sbjct: 164 HSMSQIHSNNCKVRSPDKCFSCALDKIVHELYGALNTKQASSSSTSTNRQTGFIYLLTCA 223
Query: 269 W---DTYDSFMQHDVQELNRVLCEKLE-------------DKMKGTVVEGTIQQLFEGHH 312
W + Q D E + + ++ + E + +FEG
Sbjct: 224 WKINQNLAGYSQQDAHEFWQFIINQIHQSYVLDLPNAKEVSRANNKQCECIVHTVFEGSL 283
Query: 313 MNYIECINVDYKS-TRKESFYDLQLDVKGCRDVYASFDKYVEVERLEGDNKYHAEEHGLQ 371
+ I C S T + F DL LD+K + +Y D + + E+L+ N + E + Q
Sbjct: 284 ESSIVCPGCQNNSKTTIDPFLDLSLDIKDKKKLYECLDSFHKKEQLKDFNYHCGECNSTQ 343
Query: 372 DAKKGVLFIDFPPVLQLQLKRFEYDFMRDAMVKINDRYEFPLQLDLDR-----------E 420
DA K + P VL LQLKRFE+ + + K++D EFP L++ E
Sbjct: 344 DAIKQLGIHKLPSVLVLQLKRFEH-LLNGSNRKLDDFIEFPTYLNMKNYCSTKEKDKHSE 402
Query: 421 NGKYLSPDADRSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKEDVK 480
NGK PD +Y L ++ H G V+ GHY AF + + QW+KF+D V+ +
Sbjct: 403 NGKV--PDI------IYELIGIVSHKGTVNEGHYIAFCKIS-GGQWFKFNDSMVSSISQE 453
Query: 481 RALEEQ 486
L+EQ
Sbjct: 454 EVLKEQ 459
>sp|Q9D9M2|UBP12_MOUSE Ubiquitin carboxyl-terminal hydrolase 12 OS=Mus musculus GN=Usp12
PE=2 SV=2
Length = 370
Score = 110 bits (275), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 98/326 (30%), Positives = 146/326 (44%), Gaps = 47/326 (14%)
Query: 196 YVGLKNQGATCYMNSLLQTLYHIPYFRKAVY---HMPTTENDLPSGSIPLALQSLFYKLQ 252
Y GL N G TCY NS+LQ LY FR+ V P + +L + L LF+ +
Sbjct: 38 YFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQPRKKENLLT-----CLADLFHSIA 92
Query: 253 YNDTSVATKELTKSFGW-----DTYDSFMQHDVQE-LNRVLC--------EKLEDKMKGT 298
V K + +D++MQ D E LN +L E+ ++K G
Sbjct: 93 TQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNGR 152
Query: 299 VVEGTI--------------QQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDV 344
+ G + ++F+G N C+ + S++ E F DL +DV+ +
Sbjct: 153 LRNGDVDNEDNNSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNTSI 212
Query: 345 YASFDKYVEVERLEGDNKYHAEE-HGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDAMV 403
+ E L + KY+ EE Q+A K + P +L L LKRF+Y
Sbjct: 213 THCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPLILALHLKRFKYMDQLHRYT 272
Query: 404 KINDRYEFPLQLDLDRENGKYLSPDADRSVRNLYTLHSVLVHSG-GVHGGHYYAFIRPTL 462
K++ R FPL+L L +G +PD +Y L +V+VH G G + GHY A ++
Sbjct: 273 KLSYRVVFPLELRLFNTSGDATNPD------RMYDLVAVVVHCGSGPNRGHYIAIVKS-- 324
Query: 463 SDQWYKFDDERVTKEDVKRALEEQYG 488
D W FDD+ V K D + A+EE YG
Sbjct: 325 HDFWLLFDDDIVEKIDAQ-AIEEFYG 349
>sp|O75317|UBP12_HUMAN Ubiquitin carboxyl-terminal hydrolase 12 OS=Homo sapiens GN=USP12
PE=1 SV=2
Length = 370
Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 97/323 (30%), Positives = 144/323 (44%), Gaps = 41/323 (12%)
Query: 196 YVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDLPSGSIPLALQSLFYKLQYND 255
Y GL N G TCY NS+LQ LY FR+ V + S+ L LF+ +
Sbjct: 38 YFGLVNFGNTCYCNSVLQALYFCRPFREKV--LAYKSQPRKKESLLTCLADLFHSIATQK 95
Query: 256 TSVATKELTKSFGW-----DTYDSFMQHDVQE-LNRVLC--------EKLEDKMKGTVVE 301
V K + +D++MQ D E LN +L E+ ++K G +
Sbjct: 96 KKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNGRLPN 155
Query: 302 GT--------------IQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYAS 347
G + ++F+G N C+ + S++ E F DL +DV+ +
Sbjct: 156 GNIDNENNNSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNTSITHC 215
Query: 348 FDKYVEVERLEGDNKYHAEE-HGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDAMVKIN 406
+ E L + KY+ EE Q+A K + P +L L LKRF+Y K++
Sbjct: 216 LRGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRYTKLS 275
Query: 407 DRYEFPLQLDLDRENGKYLSPDADRSVRNLYTLHSVLVHSG-GVHGGHYYAFIRPTLSDQ 465
R FPL+L L +G +PD +Y L +V+VH G G + GHY A ++ D
Sbjct: 276 YRVVFPLELRLFNTSGDATNPD------RMYDLVAVVVHCGSGPNRGHYIAIVKS--HDF 327
Query: 466 WYKFDDERVTKEDVKRALEEQYG 488
W FDD+ V K D + A+EE YG
Sbjct: 328 WLLFDDDIVEKIDAQ-AIEEFYG 349
>sp|Q52KZ6|UB12A_XENLA Ubiquitin carboxyl-terminal hydrolase 12-A OS=Xenopus laevis
GN=usp12-a PE=2 SV=1
Length = 370
Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 98/326 (30%), Positives = 146/326 (44%), Gaps = 47/326 (14%)
Query: 196 YVGLKNQGATCYMNSLLQTLYHIPYFRKAVY---HMPTTENDLPSGSIPLALQSLFYKLQ 252
Y GL N G TCY NS+LQ LY FR+ V P + +L + L LF+ +
Sbjct: 38 YFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQPRKKENLLT-----CLSDLFHSIA 92
Query: 253 YNDTSVATKELTKSFGW-----DTYDSFMQHDVQE-LNRVLC--------EKLEDKMKGT 298
V K + +D++MQ D E LN +L E+ ++K G
Sbjct: 93 TQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNGR 152
Query: 299 VVEGT--------------IQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDV 344
+ G + ++F+G N C+ + S++ E F DL +DV+ +
Sbjct: 153 IPNGNIDNENNNSAPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNTSI 212
Query: 345 YASFDKYVEVERLEGDNKYHAEE-HGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDAMV 403
+ E L + KY+ EE Q+A K + P +L L LKRF+Y
Sbjct: 213 THCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRYT 272
Query: 404 KINDRYEFPLQLDLDRENGKYLSPDADRSVRNLYTLHSVLVHSG-GVHGGHYYAFIRPTL 462
K++ R FPL+L L +G +PD +Y L +V+VH G G + GHY A ++
Sbjct: 273 KLSYRVVFPLELRLFNTSGDATNPD------RMYDLVAVVVHCGSGPNRGHYIAIVKS-- 324
Query: 463 SDQWYKFDDERVTKEDVKRALEEQYG 488
D W FDD+ V K D + A+EE YG
Sbjct: 325 HDFWLLFDDDIVEKIDAQ-AIEEFYG 349
>sp|Q5M981|UB12B_XENLA Ubiquitin carboxyl-terminal hydrolase 12-B OS=Xenopus laevis
GN=usp12-b PE=2 SV=2
Length = 370
Score = 108 bits (271), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 98/326 (30%), Positives = 146/326 (44%), Gaps = 47/326 (14%)
Query: 196 YVGLKNQGATCYMNSLLQTLYHIPYFRKAVY---HMPTTENDLPSGSIPLALQSLFYKLQ 252
Y GL N G TCY NS+LQ LY FR+ V P + +L + L LF+ +
Sbjct: 38 YFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQPRKKENLLT-----CLSDLFHSIA 92
Query: 253 YNDTSVATKELTKSFGW-----DTYDSFMQHDVQE-LNRVLC--------EKLEDKMKGT 298
V K + +D++MQ D E LN +L E+ ++K G
Sbjct: 93 TQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNGR 152
Query: 299 VVEGT--------------IQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDV 344
+ G + ++F+G N C+ + S++ E F DL +DV+ +
Sbjct: 153 IPNGNIDNENNNNTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNTSI 212
Query: 345 YASFDKYVEVERLEGDNKYHAEE-HGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDAMV 403
+ E L + KY+ EE Q+A K + P +L L LKRF+Y
Sbjct: 213 THCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRYT 272
Query: 404 KINDRYEFPLQLDLDRENGKYLSPDADRSVRNLYTLHSVLVHSG-GVHGGHYYAFIRPTL 462
K++ R FPL+L L +G +PD +Y L +V+VH G G + GHY A ++
Sbjct: 273 KLSYRVVFPLELRLFNTSGDATNPD------RMYDLVAVVVHCGSGPNRGHYIAIVKS-- 324
Query: 463 SDQWYKFDDERVTKEDVKRALEEQYG 488
D W FDD+ V K D + A+EE YG
Sbjct: 325 HDFWLLFDDDIVEKIDAQ-AIEEFYG 349
>sp|Q5RBQ4|UBP46_PONAB Ubiquitin carboxyl-terminal hydrolase 46 OS=Pongo abelii GN=USP46
PE=2 SV=1
Length = 366
Score = 106 bits (265), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 94/323 (29%), Positives = 142/323 (43%), Gaps = 41/323 (12%)
Query: 196 YVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDLPSGSIPLALQSLFYKLQYND 255
Y GL N G TCY NS+LQ LY FR+ V + ++ L LF+ +
Sbjct: 34 YFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQK--KKENLLTCLADLFHSIATQK 91
Query: 256 TSVATKELTKSFGW-----DTYDSFMQHDVQE-LNRVLC--------EKLEDKMKGTVVE 301
V K D +D++MQ D E LN +L EK ++K G +
Sbjct: 92 KKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKKQEKQNGKLKN 151
Query: 302 GT--------------IQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYAS 347
G + ++F+G N C+N + S++ E F DL +DV+ +
Sbjct: 152 GNMNEPAENNKPELTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNTSITHC 211
Query: 348 FDKYVEVERLEGDNKYHAEE-HGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDAMVKIN 406
+ E L + KY+ E Q+A+K + P +L L LKRF+Y K++
Sbjct: 212 LRDFSNTETLCSEQKYYCETCCSKQEAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLS 271
Query: 407 DRYEFPLQLDLDRENGKYLSPDADRSVRNLYTLHSVLVHSG-GVHGGHYYAFIRPTLSDQ 465
R FPL+L L + ++ D +Y L +V+VH G G + GHY ++
Sbjct: 272 YRVVFPLELRLFNTSSDAVNLD------RMYDLVAVVVHCGSGPNRGHYITIVKS--HGF 323
Query: 466 WYKFDDERVTKEDVKRALEEQYG 488
W FDD+ V K D + A+EE YG
Sbjct: 324 WLLFDDDIVEKIDAQ-AIEEFYG 345
>sp|P62069|UBP46_MOUSE Ubiquitin carboxyl-terminal hydrolase 46 OS=Mus musculus GN=Usp46
PE=1 SV=1
Length = 366
Score = 106 bits (265), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 94/323 (29%), Positives = 142/323 (43%), Gaps = 41/323 (12%)
Query: 196 YVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDLPSGSIPLALQSLFYKLQYND 255
Y GL N G TCY NS+LQ LY FR+ V + ++ L LF+ +
Sbjct: 34 YFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQK--KKENLLTCLADLFHSIATQK 91
Query: 256 TSVATKELTKSFGW-----DTYDSFMQHDVQE-LNRVLC--------EKLEDKMKGTVVE 301
V K D +D++MQ D E LN +L EK ++K G +
Sbjct: 92 KKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKKQEKQNGKLKN 151
Query: 302 GT--------------IQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYAS 347
G + ++F+G N C+N + S++ E F DL +DV+ +
Sbjct: 152 GNMNEPAENNKPELTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNTSITHC 211
Query: 348 FDKYVEVERLEGDNKYHAEE-HGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDAMVKIN 406
+ E L + KY+ E Q+A+K + P +L L LKRF+Y K++
Sbjct: 212 LRDFSNTETLCSEQKYYCETCCSKQEAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLS 271
Query: 407 DRYEFPLQLDLDRENGKYLSPDADRSVRNLYTLHSVLVHSG-GVHGGHYYAFIRPTLSDQ 465
R FPL+L L + ++ D +Y L +V+VH G G + GHY ++
Sbjct: 272 YRVVFPLELRLFNTSSDAVNLD------RMYDLVAVVVHCGSGPNRGHYITIVKS--HGF 323
Query: 466 WYKFDDERVTKEDVKRALEEQYG 488
W FDD+ V K D + A+EE YG
Sbjct: 324 WLLFDDDIVEKIDAQ-AIEEFYG 345
>sp|P62068|UBP46_HUMAN Ubiquitin carboxyl-terminal hydrolase 46 OS=Homo sapiens GN=USP46
PE=1 SV=1
Length = 366
Score = 106 bits (265), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 94/323 (29%), Positives = 142/323 (43%), Gaps = 41/323 (12%)
Query: 196 YVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDLPSGSIPLALQSLFYKLQYND 255
Y GL N G TCY NS+LQ LY FR+ V + ++ L LF+ +
Sbjct: 34 YFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQK--KKENLLTCLADLFHSIATQK 91
Query: 256 TSVATKELTKSFGW-----DTYDSFMQHDVQE-LNRVLC--------EKLEDKMKGTVVE 301
V K D +D++MQ D E LN +L EK ++K G +
Sbjct: 92 KKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKKQEKQNGKLKN 151
Query: 302 GT--------------IQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYAS 347
G + ++F+G N C+N + S++ E F DL +DV+ +
Sbjct: 152 GNMNEPAENNKPELTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNTSITHC 211
Query: 348 FDKYVEVERLEGDNKYHAEE-HGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDAMVKIN 406
+ E L + KY+ E Q+A+K + P +L L LKRF+Y K++
Sbjct: 212 LRDFSNTETLCSEQKYYCETCCSKQEAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLS 271
Query: 407 DRYEFPLQLDLDRENGKYLSPDADRSVRNLYTLHSVLVHSG-GVHGGHYYAFIRPTLSDQ 465
R FPL+L L + ++ D +Y L +V+VH G G + GHY ++
Sbjct: 272 YRVVFPLELRLFNTSSDAVNLD------RMYDLVAVVVHCGSGPNRGHYITIVKS--HGF 323
Query: 466 WYKFDDERVTKEDVKRALEEQYG 488
W FDD+ V K D + A+EE YG
Sbjct: 324 WLLFDDDIVEKIDAQ-AIEEFYG 345
>sp|A5WWB0|UBP46_DANRE Ubiquitin carboxyl-terminal hydrolase 46 OS=Danio rerio GN=usp46
PE=3 SV=2
Length = 370
Score = 103 bits (258), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 138/327 (42%), Gaps = 45/327 (13%)
Query: 196 YVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDLPSGSIPLALQSLFYKLQYND 255
Y GL N G TCY NS+LQ LY FR+ V + ++ L LF+ +
Sbjct: 34 YFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKVQQK--KKENLLTCLADLFHSIATQK 91
Query: 256 TSVATKELTKSFGW-----DTYDSFMQHDVQELNRVLCEKLED---------------KM 295
V K D +D++MQ D E L + D K
Sbjct: 92 KKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTVADILQEERKQEKQNGRLKN 151
Query: 296 KGTVVEGT------------IQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRD 343
GT + + ++F+G N C+N + S++ E F DL +DV+
Sbjct: 152 NGTAIATDTEPEQNKIDPTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNTS 211
Query: 344 VYASFDKYVEVERLEGDNKYHAEE-HGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDAM 402
+ + E L + KY+ E Q+A+K + P +L L LKRF+Y
Sbjct: 212 ITHCLRDFSNTETLCSEYKYYCEMCCSKQEAQKRMRVKKLPMILALHLKRFKYMEQLHRY 271
Query: 403 VKINDRYEFPLQLDLDRENGKYLSPDADRSVRNLYTLHSVLVHSG-GVHGGHYYAFIRPT 461
K++ R FPL+L L +G ++ D +Y L +V+VH G G + GHY ++
Sbjct: 272 TKLSYRVVFPLELRLFNTSGDAVNLD------RMYDLVAVVVHCGSGPNRGHYITIVKS- 324
Query: 462 LSDQWYKFDDERVTKEDVKRALEEQYG 488
W FDD+ V K D + A+EE YG
Sbjct: 325 -HGFWLLFDDDIVEKIDAQ-AIEEFYG 349
>sp|Q8RY18|Y5436_ARATH MATH domain-containing protein At5g43560 OS=Arabidopsis thaliana
GN=At5g43560 PE=1 SV=1
Length = 1055
Score = 100 bits (248), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 58/129 (44%), Positives = 82/129 (63%), Gaps = 8/129 (6%)
Query: 54 KFTWTIENFSRLNTKKHYSDVFVVGGYKWRILIFPKGNNV-DHLSMYLDVADSGTLPYGW 112
K TWTIE FS +N ++ DVF VGGYKW ILI+P+G +V +HLS++L VA L GW
Sbjct: 70 KNTWTIEKFSDINKRELRGDVFEVGGYKWYILIYPQGCDVCNHLSLFLCVAHHEKLLPGW 129
Query: 113 SRYAQFSLAVVNQIHSKYSIRKDTQHQFNARESDWGFTSFMPLGDLYDPSRGYLVNDS-- 170
S +AQF++AV N+ K S DT H+F +E DWG+ F+ L L + ++DS
Sbjct: 130 SHFAQFTIAVSNK-DPKKSKHSDTLHRFWKKEHDWGWKKFIELPKLKE----GFIDDSGC 184
Query: 171 VVVEAEVAV 179
+ ++A+V V
Sbjct: 185 LTIKAQVQV 193
>sp|Q8LAM0|UBP4_ARATH Ubiquitin carboxyl-terminal hydrolase 4 OS=Arabidopsis thaliana
GN=UBP4 PE=1 SV=2
Length = 365
Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 136/318 (42%), Gaps = 49/318 (15%)
Query: 196 YVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDLPSGSIPLALQSLFYKL--QY 253
Y G +N G TCY NS+LQ LY FR+ + ++ L LF ++ Q
Sbjct: 22 YFGFENFGNTCYCNSVLQALYFCAPFREQLLEHYANNKADAEENLLTCLADLFSQISSQK 81
Query: 254 NDTSVAT-----------KELTKSFGWDTYDSFMQHDVQELNRVL--------------- 287
T V EL +S+ F+ + + EL +L
Sbjct: 82 KKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNYLLNELVEILEKETQATKADNETSS 141
Query: 288 -CEKLEDKMKGTVVEGT--------IQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDV 338
EK+ + +K + G + ++F+G N C+ + + R E+F DL LD+
Sbjct: 142 SPEKIANVLKAPLANGVHKEPIVTWVHKIFQGILTNETRCLRCETVTARDETFLDLSLDI 201
Query: 339 KGCRDVYASFDKYVEVERLEGDNKYHAEE-HGLQDAKKGVLFIDFPPVLQLQLKRFEYDF 397
+ + + + E L ++K+ ++ LQ+A+K + P +L + LKRF+Y
Sbjct: 202 EQNSSITSCLKNFSSTETLHAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYME 261
Query: 398 MRDAMVKINDRYEFPLQLDLDRENGKYLSPDADRSVRNLYTLHSVLVHSG-GVHGGHYYA 456
K++ R FPL+L LS D V Y+L +V+VH G G + GHY +
Sbjct: 262 QLGRYKKLSYRVVFPLELK--------LSNTVDEYVDIEYSLFAVVVHVGSGPNHGHYVS 313
Query: 457 FIRPTLSDQWYKFDDERV 474
++ + W FDDE V
Sbjct: 314 LVKS--HNHWLFFDDESV 329
>sp|D6R901|U17LL_HUMAN Ubiquitin carboxyl-terminal hydrolase 17-like protein 21 OS=Homo
sapiens GN=USP17L21 PE=3 SV=1
Length = 530
Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 155/341 (45%), Gaps = 37/341 (10%)
Query: 162 SRGYLVNDSVVVEAEVAVRKVLDYWSYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYF 221
+R L +D V ++A R+ L + + GL+N G TCY+N+ LQ L + P
Sbjct: 47 TRVDLCDDLAPVARQLAPREKLPL--SNRRPAAVGAGLQNMGNTCYVNASLQCLTYTPPL 104
Query: 222 RKAVY---HMPTTENDLPSGSIPLALQSLFYKLQYNDTSVATKELTKSFGW------DTY 272
+ H T G + +Q+ + +N V + G+ D +
Sbjct: 105 ANYMLSREHSQTCHRH--KGCMLCTMQAHITRALHNPGHVIQPSQALAAGFHRGKQEDAH 162
Query: 273 DSFMQHDVQELNRVLC---EKLEDKMKGTVVEGTIQQLFEGHHMNYIECINVDYKSTRKE 329
+ F+ V + + ++++ K T + I Q+F G+ + I+C++ S +
Sbjct: 163 E-FLMFTVDAMKKACLPGHKQVDHHSKDTTL---IHQIFGGYWRSQIKCLHCHGISDTFD 218
Query: 330 SFYDLQLDVKGCRDVYASFDKYVEVERLEGDNKYHAEEHGLQ--DAKKGVLFIDFPPVLQ 387
+ D+ LD++ + V + ++ V+ E L G+N YH LQ A K + + VL
Sbjct: 219 PYLDIALDIQAAQSVQQALEQLVKPEELNGENAYHCGV-CLQRAPASKMLTLLTSAKVLI 277
Query: 388 LQLKRFEYDFMRDAMVKINDRYEFPLQLDLDRENGKYLS-PDADRSVRNLYTLHSVLVHS 446
L LKRF D + KI ++P LD+ Y+S P+ V Y L++VLVH+
Sbjct: 278 LVLKRFS-DVTGN---KIAKNVQYPECLDMQ----PYMSQPNTGPLV---YVLYAVLVHA 326
Query: 447 G-GVHGGHYYAFIRPTLSDQWYKFDDERVTKEDVKRALEEQ 486
G H GHY+++++ QWYK DD VT + L +Q
Sbjct: 327 GWSCHNGHYFSYVKAQ-EGQWYKMDDAEVTASSITSVLSQQ 366
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.137 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 327,259,590
Number of Sequences: 539616
Number of extensions: 14972647
Number of successful extensions: 40128
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 239
Number of HSP's successfully gapped in prelim test: 110
Number of HSP's that attempted gapping in prelim test: 39096
Number of HSP's gapped (non-prelim): 657
length of query: 821
length of database: 191,569,459
effective HSP length: 126
effective length of query: 695
effective length of database: 123,577,843
effective search space: 85886600885
effective search space used: 85886600885
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 66 (30.0 bits)